Query 023482
Match_columns 281
No_of_seqs 363 out of 2852
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 07:33:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023482.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023482hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fut_A Dimethyladenosine trans 100.0 3.7E-30 1.3E-34 226.9 17.9 166 101-281 7-172 (271)
2 3tqs_A Ribosomal RNA small sub 100.0 3.6E-30 1.2E-34 225.3 14.9 158 114-281 2-159 (255)
3 3uzu_A Ribosomal RNA small sub 100.0 6.8E-29 2.3E-33 219.8 14.7 161 112-281 13-177 (279)
4 3gru_A Dimethyladenosine trans 100.0 5.4E-28 1.8E-32 215.5 15.2 159 108-281 17-175 (295)
5 3ftd_A Dimethyladenosine trans 99.9 4.2E-26 1.4E-30 198.9 13.6 152 113-281 3-155 (249)
6 1qyr_A KSGA, high level kasuga 99.9 2.6E-26 8.9E-31 200.5 11.4 151 121-281 1-153 (252)
7 1zq9_A Probable dimethyladenos 99.9 6.1E-24 2.1E-28 188.8 16.3 151 116-281 3-156 (285)
8 2h1r_A Dimethyladenosine trans 99.9 6.9E-24 2.4E-28 189.6 14.3 155 112-281 13-169 (299)
9 1i4w_A Mitochondrial replicati 99.9 4.2E-23 1.4E-27 187.6 13.7 163 113-281 24-213 (353)
10 1qam_A ERMC' methyltransferase 99.9 5.8E-22 2E-26 172.1 15.8 149 114-281 3-151 (244)
11 1yub_A Ermam, rRNA methyltrans 99.8 2.3E-20 7.9E-25 161.9 3.9 148 114-280 2-149 (245)
12 1vbf_A 231AA long hypothetical 99.6 6.6E-15 2.3E-19 125.5 11.4 110 123-244 52-161 (231)
13 1wy7_A Hypothetical protein PH 99.6 4.6E-14 1.6E-18 118.2 13.9 102 114-231 20-126 (207)
14 3p9n_A Possible methyltransfer 99.6 1.7E-14 5.7E-19 119.5 10.6 112 123-244 23-149 (189)
15 3lbf_A Protein-L-isoaspartate 99.5 2.4E-14 8.3E-19 120.2 11.1 110 123-244 59-170 (210)
16 3njr_A Precorrin-6Y methylase; 99.5 1.9E-13 6.4E-18 115.0 15.4 113 122-246 36-152 (204)
17 1pjz_A Thiopurine S-methyltran 99.5 3.4E-14 1.2E-18 119.4 10.3 105 129-244 10-136 (203)
18 3evz_A Methyltransferase; NYSG 99.5 6.5E-14 2.2E-18 119.2 11.4 94 125-229 39-135 (230)
19 3e05_A Precorrin-6Y C5,15-meth 99.5 2.9E-13 9.9E-18 113.2 14.3 112 124-247 23-141 (204)
20 4gek_A TRNA (CMO5U34)-methyltr 99.5 1.9E-13 6.4E-18 119.6 11.6 94 139-246 68-176 (261)
21 1ne2_A Hypothetical protein TA 99.5 2.8E-13 9.6E-18 113.0 12.1 95 118-231 26-124 (200)
22 3mti_A RRNA methylase; SAM-dep 99.5 2.5E-13 8.5E-18 111.7 11.5 99 138-247 19-134 (185)
23 2yxe_A Protein-L-isoaspartate 99.5 4.7E-13 1.6E-17 112.7 13.2 110 123-244 59-173 (215)
24 2fpo_A Methylase YHHF; structu 99.5 8.9E-14 3.1E-18 116.7 8.7 108 125-244 37-156 (202)
25 3ntv_A MW1564 protein; rossman 99.5 4.2E-13 1.5E-17 114.9 13.1 112 123-244 53-172 (232)
26 2gb4_A Thiopurine S-methyltran 99.5 3.8E-13 1.3E-17 117.0 12.8 112 125-247 52-190 (252)
27 3lpm_A Putative methyltransfer 99.5 1.7E-13 5.6E-18 119.3 10.4 89 132-230 39-132 (259)
28 2yxd_A Probable cobalt-precorr 99.5 6.9E-13 2.4E-17 108.1 13.5 108 123-244 17-127 (183)
29 3q87_B N6 adenine specific DNA 99.5 1.2E-13 4.1E-18 112.8 8.5 84 125-229 5-90 (170)
30 3gdh_A Trimethylguanosine synt 99.5 7E-14 2.4E-18 120.0 7.4 106 125-243 61-176 (241)
31 4hg2_A Methyltransferase type 99.5 1.7E-13 5.9E-18 119.5 9.9 104 126-247 26-134 (257)
32 2ift_A Putative methylase HI07 99.5 1E-13 3.5E-18 116.3 8.0 107 128-244 39-159 (201)
33 3tma_A Methyltransferase; thum 99.5 5.3E-13 1.8E-17 121.5 13.3 95 123-229 185-284 (354)
34 2pbf_A Protein-L-isoaspartate 99.5 6E-13 2E-17 113.1 12.5 115 123-245 60-190 (227)
35 1vl5_A Unknown conserved prote 99.5 2.9E-13 9.8E-18 117.4 10.7 106 130-247 26-139 (260)
36 1uwv_A 23S rRNA (uracil-5-)-me 99.4 4.9E-13 1.7E-17 125.0 12.4 104 128-239 273-378 (433)
37 3ujc_A Phosphoethanolamine N-m 99.4 5.8E-13 2E-17 115.2 12.0 110 127-248 41-159 (266)
38 1jg1_A PIMT;, protein-L-isoasp 99.4 9.5E-13 3.2E-17 112.7 13.2 110 123-244 73-185 (235)
39 3tm4_A TRNA (guanine N2-)-meth 99.4 5.4E-13 1.9E-17 122.4 12.1 95 123-230 200-299 (373)
40 3hm2_A Precorrin-6Y C5,15-meth 99.4 8E-13 2.7E-17 107.6 11.8 110 124-245 8-124 (178)
41 2ozv_A Hypothetical protein AT 99.4 4.2E-13 1.4E-17 117.1 10.7 93 133-230 28-128 (260)
42 1nkv_A Hypothetical protein YJ 99.4 1E-12 3.5E-17 113.4 12.8 112 124-248 19-140 (256)
43 2esr_A Methyltransferase; stru 99.4 7.4E-13 2.5E-17 108.1 11.2 91 127-228 16-111 (177)
44 1dus_A MJ0882; hypothetical pr 99.4 1.4E-12 4.8E-17 107.1 12.9 106 128-246 39-155 (194)
45 1dl5_A Protein-L-isoaspartate 99.4 4E-13 1.4E-17 120.5 10.3 109 124-244 58-171 (317)
46 1ws6_A Methyltransferase; stru 99.4 4E-13 1.4E-17 108.5 9.4 114 123-244 21-143 (171)
47 3ofk_A Nodulation protein S; N 99.4 2.3E-13 8E-18 114.5 8.0 105 128-245 38-151 (216)
48 3jwh_A HEN1; methyltransferase 99.4 9E-13 3.1E-17 111.2 11.2 107 126-244 14-137 (217)
49 4dzr_A Protein-(glutamine-N5) 99.4 6.9E-14 2.4E-18 117.0 4.2 94 129-230 17-114 (215)
50 2fhp_A Methylase, putative; al 99.4 5E-13 1.7E-17 109.6 9.2 114 123-244 25-150 (187)
51 3dmg_A Probable ribosomal RNA 99.4 9.1E-13 3.1E-17 121.2 11.6 104 129-244 219-336 (381)
52 3ege_A Putative methyltransfer 99.4 8.6E-13 2.9E-17 114.8 10.9 110 121-247 14-129 (261)
53 3jwg_A HEN1, methyltransferase 99.4 7.2E-13 2.5E-17 111.9 10.0 107 126-244 14-137 (219)
54 1nv8_A HEMK protein; class I a 99.4 8.9E-13 3.1E-17 116.6 10.6 88 128-229 110-204 (284)
55 3hem_A Cyclopropane-fatty-acyl 99.4 3.2E-12 1.1E-16 113.5 14.2 107 129-250 60-185 (302)
56 1xxl_A YCGJ protein; structura 99.4 1E-12 3.5E-17 112.7 10.7 110 126-247 6-123 (239)
57 3m33_A Uncharacterized protein 99.4 3.4E-12 1.1E-16 108.7 13.6 103 128-245 36-139 (226)
58 3bus_A REBM, methyltransferase 99.4 2.3E-12 7.7E-17 112.3 12.5 110 127-248 47-166 (273)
59 3uwp_A Histone-lysine N-methyl 99.4 6.4E-13 2.2E-17 122.2 9.3 110 125-244 157-284 (438)
60 3eey_A Putative rRNA methylase 99.4 1E-12 3.5E-17 109.1 9.7 100 136-246 17-137 (197)
61 3dlc_A Putative S-adenosyl-L-m 99.4 1.4E-12 4.9E-17 109.2 10.4 107 127-246 30-146 (219)
62 4dcm_A Ribosomal RNA large sub 99.4 1E-12 3.5E-17 120.7 10.1 104 129-245 210-331 (375)
63 2yqz_A Hypothetical protein TT 99.4 2.4E-12 8.1E-17 111.3 11.7 109 127-247 20-140 (263)
64 3hnr_A Probable methyltransfer 99.4 2E-12 6.7E-17 109.0 10.8 103 131-248 35-145 (220)
65 3kkz_A Uncharacterized protein 99.4 3.6E-12 1.2E-16 111.0 12.7 112 125-248 29-150 (267)
66 1i1n_A Protein-L-isoaspartate 99.4 1.9E-12 6.7E-17 109.8 10.7 110 123-244 57-178 (226)
67 3dtn_A Putative methyltransfer 99.4 2.7E-12 9.2E-17 109.3 11.5 106 130-248 32-148 (234)
68 1yzh_A TRNA (guanine-N(7)-)-me 99.4 2.6E-12 9E-17 108.3 11.3 96 141-246 41-154 (214)
69 3f4k_A Putative methyltransfer 99.4 2.5E-12 8.7E-17 110.9 11.4 112 125-248 29-150 (257)
70 1zx0_A Guanidinoacetate N-meth 99.4 1.1E-12 3.9E-17 112.2 9.1 105 127-244 47-166 (236)
71 1l3i_A Precorrin-6Y methyltran 99.4 3.6E-12 1.2E-16 104.5 11.7 109 124-244 16-130 (192)
72 2frn_A Hypothetical protein PH 99.4 1.4E-12 4.8E-17 114.9 9.8 105 128-247 114-224 (278)
73 3fpf_A Mtnas, putative unchara 99.4 2.6E-12 8.8E-17 113.8 11.5 103 129-245 110-219 (298)
74 3vc1_A Geranyl diphosphate 2-C 99.4 3.2E-12 1.1E-16 114.1 11.7 107 130-248 105-221 (312)
75 3grz_A L11 mtase, ribosomal pr 99.4 2.1E-12 7.3E-17 107.9 9.8 93 139-245 58-156 (205)
76 3g5l_A Putative S-adenosylmeth 99.4 2.7E-12 9.4E-17 110.6 10.6 103 131-246 34-143 (253)
77 2o57_A Putative sarcosine dime 99.4 5E-12 1.7E-16 111.6 12.5 111 127-249 64-188 (297)
78 3iv6_A Putative Zn-dependent a 99.4 2.4E-12 8.3E-17 112.4 10.3 107 127-245 31-145 (261)
79 1ve3_A Hypothetical protein PH 99.4 3.6E-12 1.2E-16 107.7 11.2 103 130-246 29-140 (227)
80 2xvm_A Tellurite resistance pr 99.4 3.6E-12 1.2E-16 105.4 10.9 102 132-246 23-134 (199)
81 3mb5_A SAM-dependent methyltra 99.4 4.1E-12 1.4E-16 109.8 11.6 107 125-244 77-190 (255)
82 3h2b_A SAM-dependent methyltra 99.4 2.4E-12 8.2E-17 107.2 9.7 90 142-246 42-139 (203)
83 3gu3_A Methyltransferase; alph 99.4 3.3E-12 1.1E-16 112.5 11.1 110 123-245 3-123 (284)
84 3dh0_A SAM dependent methyltra 99.4 8.7E-13 3E-17 111.1 7.1 104 130-245 26-140 (219)
85 3a27_A TYW2, uncharacterized p 99.4 1.9E-12 6.5E-17 113.7 9.4 112 121-245 99-216 (272)
86 2h00_A Methyltransferase 10 do 99.4 3.3E-12 1.1E-16 110.4 10.7 82 141-231 65-154 (254)
87 3duw_A OMT, O-methyltransferas 99.3 9.4E-12 3.2E-16 105.3 13.1 113 125-244 42-163 (223)
88 2pwy_A TRNA (adenine-N(1)-)-me 99.3 6.5E-12 2.2E-16 108.4 12.2 109 125-245 80-195 (258)
89 2gpy_A O-methyltransferase; st 99.3 5E-12 1.7E-16 107.9 11.2 112 123-244 36-156 (233)
90 3orh_A Guanidinoacetate N-meth 99.3 1.6E-12 5.5E-17 111.7 8.1 106 128-244 48-166 (236)
91 2igt_A SAM dependent methyltra 99.3 2.2E-12 7.6E-17 116.5 9.4 114 123-244 134-268 (332)
92 1r18_A Protein-L-isoaspartate( 99.3 2.5E-12 8.6E-17 109.4 9.2 110 123-244 64-190 (227)
93 3k6r_A Putative transferase PH 99.3 1.8E-12 6E-17 114.2 8.4 99 131-244 117-221 (278)
94 2pxx_A Uncharacterized protein 99.3 1.9E-12 6.5E-17 108.3 8.0 76 140-227 41-117 (215)
95 4df3_A Fibrillarin-like rRNA/T 99.3 6.4E-12 2.2E-16 107.8 11.4 101 136-245 72-179 (233)
96 2b3t_A Protein methyltransfera 99.3 5.1E-12 1.8E-16 110.9 11.1 89 128-230 97-189 (276)
97 3dr5_A Putative O-methyltransf 99.3 1.1E-11 3.8E-16 105.6 12.8 110 125-244 37-159 (221)
98 3m70_A Tellurite resistance pr 99.3 4.2E-12 1.4E-16 111.6 10.5 100 136-248 115-223 (286)
99 3tfw_A Putative O-methyltransf 99.3 4.6E-12 1.6E-16 109.6 10.6 109 126-244 48-166 (248)
100 2fca_A TRNA (guanine-N(7)-)-me 99.3 4.9E-12 1.7E-16 107.0 10.3 97 141-247 38-152 (213)
101 1fbn_A MJ fibrillarin homologu 99.3 4.7E-12 1.6E-16 108.1 10.3 100 134-246 67-176 (230)
102 1kpg_A CFA synthase;, cyclopro 99.3 2.2E-11 7.4E-16 107.0 14.7 107 129-250 52-170 (287)
103 4htf_A S-adenosylmethionine-de 99.3 1E-11 3.5E-16 109.1 12.4 106 131-248 59-173 (285)
104 2fk8_A Methoxy mycolic acid sy 99.3 2.1E-11 7.2E-16 108.8 14.6 108 128-250 77-196 (318)
105 3u81_A Catechol O-methyltransf 99.3 4.8E-12 1.6E-16 107.3 9.9 115 123-244 40-166 (221)
106 3dxy_A TRNA (guanine-N(7)-)-me 99.3 5E-12 1.7E-16 107.5 9.9 98 141-248 34-150 (218)
107 3id6_C Fibrillarin-like rRNA/T 99.3 8.7E-12 3E-16 107.0 11.5 110 128-246 60-179 (232)
108 2nxc_A L11 mtase, ribosomal pr 99.3 2.5E-12 8.7E-17 111.7 8.3 95 139-246 118-216 (254)
109 3ccf_A Cyclopropane-fatty-acyl 99.3 1.9E-12 6.3E-17 113.6 7.5 102 129-246 45-152 (279)
110 1o9g_A RRNA methyltransferase; 99.3 2.9E-12 1E-16 110.7 8.6 110 129-245 39-211 (250)
111 1xtp_A LMAJ004091AAA; SGPP, st 99.3 8E-12 2.7E-16 107.5 11.3 108 128-247 80-196 (254)
112 2fyt_A Protein arginine N-meth 99.3 5.6E-12 1.9E-16 114.2 10.6 103 129-244 52-167 (340)
113 2ih2_A Modification methylase 99.3 2.4E-12 8.3E-17 119.3 8.4 94 114-228 13-109 (421)
114 3bt7_A TRNA (uracil-5-)-methyl 99.3 4.3E-12 1.5E-16 116.2 9.9 115 127-243 200-321 (369)
115 1i9g_A Hypothetical protein RV 99.3 8.7E-12 3E-16 109.2 11.5 110 124-245 82-200 (280)
116 1wzn_A SAM-dependent methyltra 99.3 7.1E-12 2.4E-16 107.9 10.8 103 129-244 29-141 (252)
117 2p35_A Trans-aconitate 2-methy 99.3 3.8E-12 1.3E-16 109.8 9.1 105 127-247 19-131 (259)
118 1nt2_A Fibrillarin-like PRE-rR 99.3 5.6E-12 1.9E-16 106.6 9.7 101 138-247 54-160 (210)
119 2yvl_A TRMI protein, hypotheti 99.3 2.6E-11 8.9E-16 104.0 13.9 110 125-246 75-188 (248)
120 3bkw_A MLL3908 protein, S-aden 99.3 1.1E-11 3.6E-16 105.9 11.1 101 132-245 34-141 (243)
121 3tr6_A O-methyltransferase; ce 99.3 3.9E-12 1.3E-16 107.8 8.3 113 123-244 46-170 (225)
122 3lcc_A Putative methyl chlorid 99.3 4.3E-12 1.5E-16 108.3 8.4 101 130-244 56-167 (235)
123 3g2m_A PCZA361.24; SAM-depende 99.3 4.9E-12 1.7E-16 112.1 9.1 109 126-248 68-190 (299)
124 3l8d_A Methyltransferase; stru 99.3 1E-11 3.5E-16 106.0 10.8 105 128-247 42-152 (242)
125 3bkx_A SAM-dependent methyltra 99.3 9.7E-12 3.3E-16 108.4 10.8 108 128-247 30-158 (275)
126 1g8a_A Fibrillarin-like PRE-rR 99.3 1.1E-11 3.8E-16 105.3 10.7 101 138-247 70-177 (227)
127 3mgg_A Methyltransferase; NYSG 99.3 7.6E-12 2.6E-16 109.2 9.7 105 130-246 26-140 (276)
128 3k0b_A Predicted N6-adenine-sp 99.3 1.8E-11 6.1E-16 113.0 12.7 94 123-229 183-319 (393)
129 2b25_A Hypothetical protein; s 99.3 1.2E-11 4E-16 111.7 11.1 111 125-245 89-216 (336)
130 3c3p_A Methyltransferase; NP_9 99.3 1.6E-11 5.6E-16 103.0 11.2 107 125-244 40-156 (210)
131 1sui_A Caffeoyl-COA O-methyltr 99.3 1.3E-11 4.4E-16 106.9 10.9 116 123-244 61-186 (247)
132 3thr_A Glycine N-methyltransfe 99.3 4.6E-12 1.6E-16 111.6 8.1 108 127-246 43-173 (293)
133 3ldg_A Putative uncharacterize 99.3 1.4E-11 4.8E-16 113.3 11.5 93 124-229 177-312 (384)
134 3g5t_A Trans-aconitate 3-methy 99.3 1.3E-11 4.4E-16 109.3 10.9 114 126-246 22-147 (299)
135 1yb2_A Hypothetical protein TA 99.3 1.2E-11 4.1E-16 108.5 10.4 104 129-245 98-208 (275)
136 2okc_A Type I restriction enzy 99.3 9.4E-12 3.2E-16 116.7 10.3 101 115-229 146-265 (445)
137 2f8l_A Hypothetical protein LM 99.3 1.3E-11 4.4E-16 111.8 10.5 101 115-229 101-213 (344)
138 3pfg_A N-methyltransferase; N, 99.3 1.6E-11 5.5E-16 106.5 10.6 88 141-244 50-147 (263)
139 3r0q_C Probable protein argini 99.3 1.3E-11 4.4E-16 113.3 10.3 102 129-244 51-165 (376)
140 3g89_A Ribosomal RNA small sub 99.3 4.2E-12 1.4E-16 110.1 6.6 96 140-244 79-180 (249)
141 1o54_A SAM-dependent O-methylt 99.3 2.8E-11 9.5E-16 106.1 11.9 107 126-245 97-210 (277)
142 3ou2_A SAM-dependent methyltra 99.3 2.6E-11 8.9E-16 101.6 11.2 103 130-247 34-145 (218)
143 2kw5_A SLR1183 protein; struct 99.3 2.7E-11 9.3E-16 100.7 11.1 104 130-248 21-131 (202)
144 2p7i_A Hypothetical protein; p 99.3 1.2E-11 4.1E-16 105.5 9.1 103 131-248 31-141 (250)
145 3ldu_A Putative methylase; str 99.3 1.5E-11 5E-16 113.3 10.3 93 124-229 178-313 (385)
146 3q7e_A Protein arginine N-meth 99.3 8.8E-12 3E-16 113.3 8.7 94 138-244 63-169 (349)
147 3ckk_A TRNA (guanine-N(7)-)-me 99.3 1.8E-11 6.2E-16 105.2 10.0 97 141-247 46-167 (235)
148 1xdz_A Methyltransferase GIDB; 99.3 9.1E-12 3.1E-16 107.0 8.1 95 140-244 69-170 (240)
149 1g6q_1 HnRNP arginine N-methyl 99.3 1.7E-11 5.8E-16 110.5 10.0 103 129-244 26-141 (328)
150 2qm3_A Predicted methyltransfe 99.3 8.3E-11 2.8E-15 107.8 14.7 118 114-243 143-272 (373)
151 3e23_A Uncharacterized protein 99.3 1.4E-11 4.9E-16 103.2 8.6 99 129-246 33-139 (211)
152 2p8j_A S-adenosylmethionine-de 99.2 3E-11 1E-15 100.8 10.5 97 139-247 21-127 (209)
153 2bm8_A Cephalosporin hydroxyla 99.2 1E-11 3.6E-16 106.7 7.8 108 123-244 62-183 (236)
154 3cgg_A SAM-dependent methyltra 99.2 3.8E-11 1.3E-15 98.5 10.9 91 139-244 44-143 (195)
155 3e8s_A Putative SAM dependent 99.2 1.5E-11 5.1E-16 103.5 8.6 105 130-246 41-150 (227)
156 1m6y_A S-adenosyl-methyltransf 99.2 2.2E-11 7.5E-16 108.5 10.0 95 127-228 12-109 (301)
157 4azs_A Methyltransferase WBDD; 99.2 1.9E-11 6.6E-16 118.0 10.4 118 141-272 66-194 (569)
158 3lkd_A Type I restriction-modi 99.2 2.9E-11 1E-15 115.8 11.5 105 114-228 191-308 (542)
159 3r3h_A O-methyltransferase, SA 99.2 2.6E-12 9E-17 110.9 3.8 116 123-244 42-166 (242)
160 3i9f_A Putative type 11 methyl 99.2 8.6E-12 2.9E-16 100.9 6.6 96 133-246 9-110 (170)
161 2ipx_A RRNA 2'-O-methyltransfe 99.2 2.9E-11 1E-15 103.2 10.2 102 136-246 72-180 (233)
162 2avd_A Catechol-O-methyltransf 99.2 1.7E-11 5.7E-16 104.1 8.6 114 123-244 51-175 (229)
163 3sm3_A SAM-dependent methyltra 99.2 3.6E-11 1.2E-15 101.8 10.3 95 141-247 30-140 (235)
164 2hnk_A SAM-dependent O-methylt 99.2 5.4E-11 1.8E-15 102.0 11.5 122 123-245 42-178 (239)
165 4dmg_A Putative uncharacterize 99.2 1.3E-11 4.6E-16 113.8 8.2 92 124-227 198-290 (393)
166 4hc4_A Protein arginine N-meth 99.2 1.2E-11 4E-16 113.4 7.7 93 138-244 80-185 (376)
167 2pjd_A Ribosomal RNA small sub 99.2 1.3E-11 4.3E-16 111.9 7.6 88 128-229 183-273 (343)
168 1jsx_A Glucose-inhibited divis 99.2 1.2E-11 4.3E-16 103.2 7.0 102 129-244 50-161 (207)
169 1ixk_A Methyltransferase; open 99.2 2.2E-11 7.4E-16 109.2 8.9 93 123-227 100-197 (315)
170 2jjq_A Uncharacterized RNA met 99.2 2.7E-11 9.1E-16 113.0 9.8 97 125-235 273-372 (425)
171 1y8c_A S-adenosylmethionine-de 99.2 5.7E-11 2E-15 101.3 11.1 105 128-245 22-139 (246)
172 2y1w_A Histone-arginine methyl 99.2 2.8E-11 9.6E-16 109.9 9.6 103 128-244 37-151 (348)
173 3c3y_A Pfomt, O-methyltransfer 99.2 3.2E-11 1.1E-15 103.6 9.5 117 123-244 52-177 (237)
174 3p2e_A 16S rRNA methylase; met 99.2 8.6E-12 2.9E-16 106.5 5.7 96 140-246 23-137 (225)
175 3d2l_A SAM-dependent methyltra 99.2 5.2E-11 1.8E-15 101.5 10.7 103 127-245 21-134 (243)
176 1ri5_A MRNA capping enzyme; me 99.2 5.3E-11 1.8E-15 104.6 11.0 97 139-246 62-172 (298)
177 3ajd_A Putative methyltransfer 99.2 1E-11 3.5E-16 109.1 6.0 93 129-229 71-168 (274)
178 3dli_A Methyltransferase; PSI- 99.2 8.5E-11 2.9E-15 100.6 11.6 102 129-248 28-140 (240)
179 3mq2_A 16S rRNA methyltransfer 99.2 1.4E-11 4.7E-16 104.0 6.4 101 132-245 18-137 (218)
180 2b78_A Hypothetical protein SM 99.2 2.6E-11 9E-16 111.6 8.8 97 123-228 195-296 (385)
181 3ggd_A SAM-dependent methyltra 99.2 4.7E-11 1.6E-15 102.3 9.8 102 139-248 54-163 (245)
182 3ocj_A Putative exported prote 99.2 3.4E-11 1.2E-15 107.0 9.0 95 138-245 115-224 (305)
183 3htx_A HEN1; HEN1, small RNA m 99.2 5.9E-11 2E-15 117.0 11.3 102 128-241 708-828 (950)
184 4fsd_A Arsenic methyltransfera 99.2 3.9E-11 1.3E-15 110.3 9.3 99 139-249 81-204 (383)
185 2gs9_A Hypothetical protein TT 99.2 8.5E-11 2.9E-15 98.4 10.5 97 133-248 29-132 (211)
186 2yx1_A Hypothetical protein MJ 99.2 3.7E-11 1.3E-15 108.7 8.7 89 140-244 194-287 (336)
187 3c0k_A UPF0064 protein YCCW; P 99.2 3.5E-11 1.2E-15 111.1 8.7 93 126-228 207-304 (396)
188 1p91_A Ribosomal RNA large sub 99.2 1.7E-10 5.7E-15 100.4 12.5 92 140-247 84-177 (269)
189 2as0_A Hypothetical protein PH 99.2 3.4E-11 1.1E-15 111.2 8.5 97 123-228 200-300 (396)
190 2vdv_E TRNA (guanine-N(7)-)-me 99.2 9E-11 3.1E-15 101.1 10.3 97 140-246 48-171 (246)
191 2ar0_A M.ecoki, type I restric 99.2 5.2E-11 1.8E-15 114.2 9.6 101 117-229 146-273 (541)
192 2r6z_A UPF0341 protein in RSP 99.2 1.3E-11 4.4E-16 107.7 4.8 85 135-229 77-173 (258)
193 2ex4_A Adrenal gland protein A 99.2 3.6E-11 1.2E-15 103.0 7.5 94 141-246 79-183 (241)
194 1u2z_A Histone-lysine N-methyl 99.2 1.6E-10 5.6E-15 107.5 12.4 111 126-244 227-355 (433)
195 3cbg_A O-methyltransferase; cy 99.2 7.6E-11 2.6E-15 100.8 9.3 113 124-244 55-178 (232)
196 1wxx_A TT1595, hypothetical pr 99.2 2.2E-11 7.6E-16 112.0 6.3 80 141-228 209-290 (382)
197 3g07_A 7SK snRNA methylphospha 99.2 6.2E-11 2.1E-15 104.9 8.6 45 141-185 46-92 (292)
198 3khk_A Type I restriction-modi 99.2 3.7E-11 1.3E-15 115.2 7.6 103 114-229 219-341 (544)
199 2a14_A Indolethylamine N-methy 99.2 3.2E-11 1.1E-15 105.1 6.4 101 138-247 52-196 (263)
200 2avn_A Ubiquinone/menaquinone 99.1 1.2E-10 4.2E-15 100.9 9.7 90 141-246 54-150 (260)
201 3b3j_A Histone-arginine methyl 99.1 1.5E-10 5.3E-15 109.4 11.0 101 130-244 147-259 (480)
202 3bgv_A MRNA CAP guanine-N7 met 99.1 2.2E-10 7.7E-15 102.0 11.4 113 129-247 20-154 (313)
203 3ll7_A Putative methyltransfer 99.1 4.3E-11 1.5E-15 110.6 6.4 78 141-229 93-175 (410)
204 3bzb_A Uncharacterized protein 99.1 5.1E-10 1.8E-14 98.5 12.6 110 129-244 67-201 (281)
205 3v97_A Ribosomal RNA large sub 99.1 2.4E-10 8.1E-15 112.8 11.4 92 124-228 524-620 (703)
206 3adn_A Spermidine synthase; am 99.1 1E-10 3.5E-15 103.9 7.9 95 140-245 82-195 (294)
207 1xj5_A Spermidine synthase 1; 99.1 1.2E-10 4.1E-15 105.2 8.5 96 139-244 118-231 (334)
208 2g72_A Phenylethanolamine N-me 99.1 1.2E-10 4E-15 102.6 8.2 111 130-247 58-214 (289)
209 2o07_A Spermidine synthase; st 99.1 1.4E-10 4.7E-15 103.5 8.5 96 139-245 93-206 (304)
210 2i62_A Nicotinamide N-methyltr 99.1 9.8E-11 3.4E-15 101.1 7.4 100 138-246 53-196 (265)
211 3bxo_A N,N-dimethyltransferase 99.1 2.8E-10 9.5E-15 96.7 10.0 68 140-223 39-106 (239)
212 2qe6_A Uncharacterized protein 99.1 8.1E-10 2.8E-14 97.0 13.2 123 127-250 62-198 (274)
213 1iy9_A Spermidine synthase; ro 99.1 1.6E-10 5.4E-15 101.6 8.1 93 141-244 75-185 (275)
214 3lec_A NADB-rossmann superfami 99.1 3.1E-10 1.1E-14 97.0 9.6 62 141-202 21-87 (230)
215 1uir_A Polyamine aminopropyltr 99.1 1.9E-10 6.5E-15 103.0 8.7 95 140-245 76-192 (314)
216 2oyr_A UPF0341 protein YHIQ; a 99.1 1E-10 3.6E-15 101.8 6.7 89 131-230 76-177 (258)
217 3gnl_A Uncharacterized protein 99.1 3.1E-10 1.1E-14 97.8 9.5 61 141-201 21-86 (244)
218 3bwc_A Spermidine synthase; SA 99.1 3.2E-10 1.1E-14 101.1 9.9 95 140-244 94-206 (304)
219 2b9e_A NOL1/NOP2/SUN domain fa 99.1 2.6E-10 8.7E-15 102.0 9.1 96 124-228 85-185 (309)
220 3ufb_A Type I restriction-modi 99.1 4.6E-10 1.6E-14 107.4 11.3 103 117-228 194-313 (530)
221 2pt6_A Spermidine synthase; tr 99.1 2.1E-10 7.1E-15 103.1 8.3 94 140-244 115-226 (321)
222 3v97_A Ribosomal RNA large sub 99.1 5.9E-10 2E-14 110.0 12.2 97 123-229 172-315 (703)
223 3m6w_A RRNA methylase; rRNA me 99.1 6E-11 2.1E-15 111.4 4.7 95 123-228 83-181 (464)
224 1inl_A Spermidine synthase; be 99.1 2.6E-10 8.9E-15 101.3 8.3 94 140-244 89-201 (296)
225 3kr9_A SAM-dependent methyltra 99.1 4.6E-10 1.6E-14 95.7 9.3 58 141-198 15-77 (225)
226 3dou_A Ribosomal RNA large sub 99.1 9.3E-10 3.2E-14 91.5 10.5 97 139-245 23-136 (191)
227 3hp7_A Hemolysin, putative; st 99.1 3.6E-10 1.2E-14 100.0 8.4 106 129-246 72-183 (291)
228 2yxl_A PH0851 protein, 450AA l 99.0 4.3E-10 1.5E-14 105.6 9.4 94 125-228 243-341 (450)
229 3fzg_A 16S rRNA methylase; met 99.0 2.8E-10 9.7E-15 94.2 7.1 86 130-230 40-128 (200)
230 2frx_A Hypothetical protein YE 99.0 3.9E-10 1.3E-14 106.5 9.0 95 123-228 97-198 (479)
231 3s1s_A Restriction endonucleas 99.0 8.2E-10 2.8E-14 108.7 11.2 114 103-228 278-410 (878)
232 1ej0_A FTSJ; methyltransferase 99.0 3.3E-10 1.1E-14 91.1 7.2 101 132-245 12-133 (180)
233 1mjf_A Spermidine synthase; sp 99.0 4.3E-10 1.5E-14 99.1 8.4 94 140-245 74-190 (281)
234 3gjy_A Spermidine synthase; AP 99.0 6.7E-10 2.3E-14 99.3 9.5 93 143-245 91-197 (317)
235 2b2c_A Spermidine synthase; be 99.0 4.3E-10 1.5E-14 100.7 8.3 94 140-244 107-218 (314)
236 2vdw_A Vaccinia virus capping 99.0 5.5E-10 1.9E-14 99.5 8.9 101 141-245 48-166 (302)
237 4e2x_A TCAB9; kijanose, tetron 99.0 8.5E-11 2.9E-15 108.9 3.7 107 128-246 94-206 (416)
238 2plw_A Ribosomal RNA methyltra 99.0 6.2E-10 2.1E-14 92.3 8.6 99 139-246 20-152 (201)
239 3m4x_A NOL1/NOP2/SUN family pr 99.0 2.6E-10 9E-15 106.9 6.1 94 123-227 87-185 (456)
240 2i7c_A Spermidine synthase; tr 99.0 7.9E-10 2.7E-14 97.5 8.8 95 139-244 76-188 (283)
241 1sqg_A SUN protein, FMU protei 99.0 8.5E-10 2.9E-14 102.9 9.2 96 123-228 228-326 (429)
242 3cc8_A Putative methyltransfer 99.0 2.8E-09 9.6E-14 89.6 9.7 98 132-245 24-127 (230)
243 3opn_A Putative hemolysin; str 99.0 1.4E-10 4.7E-15 99.6 1.6 109 129-246 24-135 (232)
244 2cmg_A Spermidine synthase; tr 98.9 8.7E-10 3E-14 96.3 6.6 91 140-245 71-168 (262)
245 1x19_A CRTF-related protein; m 98.9 4.5E-09 1.5E-13 95.4 11.2 105 128-247 177-294 (359)
246 1qzz_A RDMB, aclacinomycin-10- 98.9 3E-09 1E-13 96.9 10.1 101 130-245 171-284 (374)
247 2r3s_A Uncharacterized protein 98.9 4.6E-09 1.6E-13 94.1 10.6 102 129-244 151-267 (335)
248 1wg8_A Predicted S-adenosylmet 98.9 7.6E-09 2.6E-13 90.4 11.5 94 127-229 8-101 (285)
249 2dul_A N(2),N(2)-dimethylguano 98.9 2.1E-09 7.1E-14 98.6 8.4 92 141-244 47-160 (378)
250 2aot_A HMT, histamine N-methyl 98.9 1.3E-09 4.6E-14 96.1 6.8 103 140-248 51-172 (292)
251 1vlm_A SAM-dependent methyltra 98.9 3E-09 1E-13 89.6 8.2 85 142-247 48-138 (219)
252 3dp7_A SAM-dependent methyltra 98.9 1.3E-08 4.3E-13 92.8 12.3 93 140-246 178-285 (363)
253 2wa2_A Non-structural protein 98.9 4.6E-10 1.6E-14 98.8 2.6 99 131-245 72-190 (276)
254 3gwz_A MMCR; methyltransferase 98.9 1.9E-08 6.6E-13 91.7 13.0 104 130-248 191-307 (369)
255 3mcz_A O-methyltransferase; ad 98.9 4.9E-09 1.7E-13 94.8 8.8 103 132-246 169-285 (352)
256 3giw_A Protein of unknown func 98.9 6.7E-09 2.3E-13 90.9 9.1 117 127-250 63-202 (277)
257 2oxt_A Nucleoside-2'-O-methylt 98.9 5.6E-10 1.9E-14 97.6 2.3 97 130-242 63-177 (265)
258 3axs_A Probable N(2),N(2)-dime 98.8 4E-09 1.4E-13 97.1 7.4 93 140-244 51-154 (392)
259 1tw3_A COMT, carminomycin 4-O- 98.8 8.2E-09 2.8E-13 93.5 9.3 99 131-244 173-284 (360)
260 2ip2_A Probable phenazine-spec 98.8 8.3E-09 2.9E-13 92.5 9.2 102 129-246 156-270 (334)
261 2nyu_A Putative ribosomal RNA 98.8 6.6E-09 2.3E-13 85.6 7.6 95 139-246 20-143 (196)
262 2p41_A Type II methyltransfera 98.8 1.2E-09 4.3E-14 97.3 3.3 97 133-246 74-189 (305)
263 3i53_A O-methyltransferase; CO 98.8 1E-08 3.5E-13 92.0 8.7 94 138-246 166-272 (332)
264 1af7_A Chemotaxis receptor met 98.8 9.8E-09 3.3E-13 90.1 8.4 74 141-225 105-221 (274)
265 3frh_A 16S rRNA methylase; met 98.8 1.3E-08 4.5E-13 87.1 8.7 74 140-227 104-178 (253)
266 2k4m_A TR8_protein, UPF0146 pr 98.8 1.2E-08 4.2E-13 80.3 6.9 84 126-235 22-108 (153)
267 3sso_A Methyltransferase; macr 98.7 1.1E-08 3.8E-13 93.8 7.0 103 128-244 204-320 (419)
268 3cvo_A Methyltransferase-like 98.7 8.6E-08 3E-12 80.2 11.8 118 123-244 14-150 (202)
269 3lcv_B Sisomicin-gentamicin re 98.7 1.7E-08 5.9E-13 87.3 6.9 77 140-229 131-210 (281)
270 2zfu_A Nucleomethylin, cerebra 98.7 9.8E-09 3.4E-13 86.0 5.0 85 132-244 57-147 (215)
271 2qfm_A Spermine synthase; sper 98.7 3E-08 1E-12 89.8 8.3 79 141-227 188-277 (364)
272 3lst_A CALO1 methyltransferase 98.6 7.3E-08 2.5E-12 87.1 8.0 98 131-246 174-284 (348)
273 1fp1_D Isoliquiritigenin 2'-O- 98.6 1.4E-07 4.8E-12 86.0 9.3 97 131-247 198-305 (372)
274 3reo_A (ISO)eugenol O-methyltr 98.6 1.1E-07 3.8E-12 86.7 8.4 96 132-247 193-299 (368)
275 3p9c_A Caffeic acid O-methyltr 98.5 2.3E-07 7.8E-12 84.5 9.2 98 130-247 189-297 (364)
276 1fp2_A Isoflavone O-methyltran 98.5 1.8E-07 6E-12 84.7 8.3 89 139-247 186-287 (352)
277 2xyq_A Putative 2'-O-methyl tr 98.5 2.1E-07 7.1E-12 82.2 7.4 83 138-246 60-169 (290)
278 4a6d_A Hydroxyindole O-methylt 98.5 8.9E-07 3E-11 80.3 11.3 100 131-245 169-280 (353)
279 1zg3_A Isoflavanone 4'-O-methy 98.4 4.1E-07 1.4E-11 82.4 7.2 87 140-246 192-291 (358)
280 2ld4_A Anamorsin; methyltransf 98.3 2.6E-07 8.9E-12 74.8 4.0 85 137-246 8-99 (176)
281 2zig_A TTHA0409, putative modi 98.3 1.6E-06 5.4E-11 76.7 8.5 61 124-185 219-279 (297)
282 3tka_A Ribosomal RNA small sub 98.3 3.9E-06 1.3E-10 75.0 10.1 94 127-228 43-139 (347)
283 4gqb_A Protein arginine N-meth 98.2 2.4E-06 8.3E-11 82.8 7.3 89 142-244 358-463 (637)
284 4auk_A Ribosomal RNA large sub 98.1 7.7E-06 2.6E-10 74.1 9.4 86 139-241 209-296 (375)
285 3o4f_A Spermidine synthase; am 98.1 1.5E-05 5E-10 70.3 10.7 95 140-245 82-195 (294)
286 2oo3_A Protein involved in cat 98.1 3.9E-07 1.3E-11 79.6 -0.4 81 141-229 91-171 (283)
287 4fzv_A Putative methyltransfer 98.1 5.2E-06 1.8E-10 75.4 6.7 96 122-228 129-234 (359)
288 3ua3_A Protein arginine N-meth 98.0 5.9E-06 2E-10 80.4 6.5 96 142-244 410-530 (745)
289 2qy6_A UPF0209 protein YFCK; s 98.0 3.5E-06 1.2E-10 73.1 4.4 97 141-245 60-210 (257)
290 1g60_A Adenine-specific methyl 98.0 1.9E-05 6.5E-10 68.4 8.7 61 124-185 196-256 (260)
291 3g7u_A Cytosine-specific methy 97.8 7.5E-05 2.6E-09 68.2 8.7 77 143-226 3-80 (376)
292 1g55_A DNA cytosine methyltran 97.7 3.5E-05 1.2E-09 69.5 5.6 74 143-228 3-79 (343)
293 2c7p_A Modification methylase 97.7 0.00018 6.1E-09 64.4 9.9 74 142-231 11-85 (327)
294 3evf_A RNA-directed RNA polyme 97.5 5.9E-05 2E-09 65.5 3.7 104 130-246 63-182 (277)
295 3c6k_A Spermine synthase; sper 97.4 0.00043 1.5E-08 62.9 8.6 77 141-225 205-292 (381)
296 1boo_A Protein (N-4 cytosine-s 97.4 8.6E-05 2.9E-09 66.3 3.4 75 124-199 236-311 (323)
297 2qrv_A DNA (cytosine-5)-methyl 97.3 0.00068 2.3E-08 59.8 8.7 79 141-230 15-96 (295)
298 2wk1_A NOVP; transferase, O-me 97.3 0.0007 2.4E-08 59.3 8.4 78 140-227 105-219 (282)
299 3gcz_A Polyprotein; flavivirus 97.2 0.00014 4.6E-09 63.3 2.9 86 130-228 79-167 (282)
300 3qv2_A 5-cytosine DNA methyltr 97.2 0.00053 1.8E-08 61.4 6.7 75 142-229 10-88 (327)
301 4h0n_A DNMT2; SAH binding, tra 97.2 0.00054 1.9E-08 61.4 6.3 73 143-227 4-79 (333)
302 3ubt_Y Modification methylase 97.1 0.0012 4E-08 58.7 8.3 69 144-227 2-71 (331)
303 3p8z_A Mtase, non-structural p 97.1 0.0003 1E-08 59.6 4.1 82 130-226 67-153 (267)
304 1eg2_A Modification methylase 97.1 0.0013 4.3E-08 58.7 7.6 63 124-187 226-291 (319)
305 3lkz_A Non-structural protein 97.0 0.0015 5.2E-08 57.1 7.2 82 130-226 83-169 (321)
306 2py6_A Methyltransferase FKBM; 96.7 0.0026 9E-08 58.5 6.9 59 139-197 224-292 (409)
307 3me5_A Cytosine-specific methy 96.6 0.0029 9.9E-08 59.5 6.6 84 143-228 89-180 (482)
308 3eld_A Methyltransferase; flav 96.4 0.0035 1.2E-07 54.8 5.4 43 132-174 72-116 (300)
309 2px2_A Genome polyprotein [con 95.9 0.0063 2.2E-07 52.2 4.3 80 130-226 62-148 (269)
310 4fn4_A Short chain dehydrogena 95.6 0.041 1.4E-06 47.1 8.2 83 141-225 6-92 (254)
311 3b5i_A S-adenosyl-L-methionine 95.6 0.05 1.7E-06 49.3 9.1 21 142-162 53-73 (374)
312 2efj_A 3,7-dimethylxanthine me 95.5 0.08 2.7E-06 48.2 10.3 81 142-231 53-163 (384)
313 1zkd_A DUF185; NESG, RPR58, st 95.5 0.1 3.4E-06 47.5 10.8 72 121-192 49-140 (387)
314 3swr_A DNA (cytosine-5)-methyl 95.4 0.029 9.9E-07 57.1 7.4 81 143-226 541-627 (1002)
315 3ucx_A Short chain dehydrogena 95.1 0.099 3.4E-06 44.5 9.2 83 141-225 10-96 (264)
316 3m6i_A L-arabinitol 4-dehydrog 95.0 0.18 6.2E-06 44.9 11.0 105 134-244 172-279 (363)
317 3ic5_A Putative saccharopine d 94.9 0.13 4.3E-06 37.4 8.2 85 142-242 5-94 (118)
318 3imf_A Short chain dehydrogena 94.9 0.088 3E-06 44.6 8.2 83 141-225 5-91 (257)
319 4g81_D Putative hexonate dehyd 94.9 0.059 2E-06 46.2 7.0 83 141-225 8-94 (255)
320 1f8f_A Benzyl alcohol dehydrog 94.8 0.098 3.4E-06 46.9 8.7 99 135-244 184-285 (371)
321 3fpc_A NADP-dependent alcohol 94.8 0.15 5.2E-06 45.3 9.8 102 133-244 158-262 (352)
322 3lyl_A 3-oxoacyl-(acyl-carrier 94.7 0.14 4.8E-06 42.8 8.9 83 141-225 4-90 (247)
323 3rkr_A Short chain oxidoreduct 94.7 0.087 3E-06 44.7 7.6 84 141-226 28-115 (262)
324 3qiv_A Short-chain dehydrogena 94.7 0.093 3.2E-06 44.1 7.7 84 141-226 8-95 (253)
325 3o38_A Short chain dehydrogena 94.6 0.13 4.4E-06 43.6 8.6 83 141-225 21-109 (266)
326 1e3j_A NADP(H)-dependent ketos 94.6 0.36 1.2E-05 42.8 11.9 101 135-244 162-267 (352)
327 3h7a_A Short chain dehydrogena 94.6 0.081 2.8E-06 44.8 7.2 82 141-225 6-91 (252)
328 3v8b_A Putative dehydrogenase, 94.6 0.15 5E-06 44.0 8.9 83 141-225 27-113 (283)
329 3two_A Mannitol dehydrogenase; 94.6 0.15 5.1E-06 45.3 9.2 92 133-244 168-261 (348)
330 4dkj_A Cytosine-specific methy 94.5 0.069 2.4E-06 48.9 6.9 43 143-185 11-60 (403)
331 3tjr_A Short chain dehydrogena 94.5 0.11 3.9E-06 45.1 8.1 83 141-225 30-116 (301)
332 3sju_A Keto reductase; short-c 94.5 0.14 4.7E-06 44.0 8.5 83 141-225 23-109 (279)
333 3gaf_A 7-alpha-hydroxysteroid 94.4 0.11 3.8E-06 44.0 7.7 83 141-225 11-97 (256)
334 1pl8_A Human sorbitol dehydrog 94.3 0.35 1.2E-05 43.0 11.1 102 135-244 165-269 (356)
335 4fgs_A Probable dehydrogenase 94.3 0.16 5.5E-06 43.9 8.4 81 141-225 28-111 (273)
336 3o26_A Salutaridine reductase; 94.2 0.17 5.8E-06 43.6 8.4 84 141-226 11-100 (311)
337 2b4q_A Rhamnolipids biosynthes 94.2 0.17 5.8E-06 43.4 8.3 83 141-225 28-113 (276)
338 4da9_A Short-chain dehydrogena 94.2 0.21 7.3E-06 42.8 9.0 84 141-226 28-116 (280)
339 1yb1_A 17-beta-hydroxysteroid 94.1 0.22 7.6E-06 42.4 9.0 82 141-225 30-116 (272)
340 4fs3_A Enoyl-[acyl-carrier-pro 94.1 0.11 3.8E-06 44.1 7.0 84 141-226 5-95 (256)
341 3uve_A Carveol dehydrogenase ( 94.0 0.21 7.3E-06 42.8 8.8 83 141-225 10-112 (286)
342 4ft4_B DNA (cytosine-5)-methyl 94.0 0.1 3.5E-06 51.8 7.6 54 143-199 213-273 (784)
343 3grk_A Enoyl-(acyl-carrier-pro 94.0 0.19 6.4E-06 43.6 8.4 84 141-226 30-118 (293)
344 1zem_A Xylitol dehydrogenase; 94.0 0.23 7.8E-06 42.1 8.8 83 141-225 6-92 (262)
345 3pk0_A Short-chain dehydrogena 94.0 0.18 6.2E-06 42.8 8.1 83 141-225 9-96 (262)
346 3tox_A Short chain dehydrogena 94.0 0.1 3.5E-06 45.0 6.6 83 141-225 7-93 (280)
347 3svt_A Short-chain type dehydr 93.9 0.2 6.8E-06 42.9 8.3 83 141-225 10-99 (281)
348 4ibo_A Gluconate dehydrogenase 93.9 0.11 3.7E-06 44.6 6.5 83 141-225 25-111 (271)
349 3tfo_A Putative 3-oxoacyl-(acy 93.8 0.14 4.8E-06 43.8 7.2 83 141-225 3-89 (264)
350 2rhc_B Actinorhodin polyketide 93.8 0.26 9E-06 42.1 8.9 83 141-225 21-107 (277)
351 3pgx_A Carveol dehydrogenase; 93.8 0.26 8.8E-06 42.2 8.8 83 141-225 14-113 (280)
352 4egf_A L-xylulose reductase; s 93.8 0.21 7.3E-06 42.5 8.2 83 141-225 19-106 (266)
353 1ae1_A Tropinone reductase-I; 93.8 0.34 1.2E-05 41.3 9.5 83 141-225 20-107 (273)
354 2jah_A Clavulanic acid dehydro 93.8 0.23 7.7E-06 41.7 8.2 83 141-225 6-92 (247)
355 3r1i_A Short-chain type dehydr 93.7 0.12 4.1E-06 44.4 6.5 83 141-225 31-117 (276)
356 3ppi_A 3-hydroxyacyl-COA dehyd 93.7 0.26 8.8E-06 42.1 8.6 79 141-224 29-110 (281)
357 3gms_A Putative NADPH:quinone 93.7 0.095 3.2E-06 46.4 6.0 99 135-244 138-239 (340)
358 3t7c_A Carveol dehydrogenase; 93.7 0.22 7.5E-06 43.2 8.2 83 141-225 27-125 (299)
359 4eso_A Putative oxidoreductase 93.6 0.22 7.5E-06 42.1 8.0 81 141-225 7-90 (255)
360 3nyw_A Putative oxidoreductase 93.6 0.17 5.8E-06 42.7 7.2 83 141-225 6-95 (250)
361 3uog_A Alcohol dehydrogenase; 93.6 0.49 1.7E-05 42.2 10.6 99 135-244 183-283 (363)
362 3ioy_A Short-chain dehydrogena 93.6 0.22 7.5E-06 43.7 8.1 83 141-225 7-95 (319)
363 4e6p_A Probable sorbitol dehyd 93.6 0.36 1.2E-05 40.7 9.3 81 141-225 7-90 (259)
364 4imr_A 3-oxoacyl-(acyl-carrier 93.6 0.12 4E-06 44.5 6.2 82 141-225 32-117 (275)
365 1zk4_A R-specific alcohol dehy 93.5 0.25 8.7E-06 41.1 8.2 82 141-225 5-90 (251)
366 3llv_A Exopolyphosphatase-rela 93.5 0.41 1.4E-05 36.2 8.7 70 142-226 6-79 (141)
367 2bgk_A Rhizome secoisolaricire 93.5 0.32 1.1E-05 41.2 8.9 82 141-225 15-100 (278)
368 3cxt_A Dehydrogenase with diff 93.5 0.3 1E-05 42.3 8.7 83 141-225 33-119 (291)
369 3pxx_A Carveol dehydrogenase; 93.5 0.25 8.5E-06 42.2 8.2 83 141-225 9-107 (287)
370 3awd_A GOX2181, putative polyo 93.5 0.27 9.1E-06 41.2 8.2 82 141-225 12-98 (260)
371 3av4_A DNA (cytosine-5)-methyl 93.4 0.18 6.1E-06 52.8 8.1 83 142-227 851-939 (1330)
372 3sx2_A Putative 3-ketoacyl-(ac 93.4 0.21 7.2E-06 42.6 7.5 83 141-225 12-110 (278)
373 2ae2_A Protein (tropinone redu 93.4 0.37 1.3E-05 40.6 9.0 83 141-225 8-95 (260)
374 3fwz_A Inner membrane protein 93.3 0.27 9.3E-06 37.5 7.4 74 143-229 8-83 (140)
375 3lf2_A Short chain oxidoreduct 93.3 0.29 1E-05 41.5 8.2 83 141-225 7-95 (265)
376 3ftp_A 3-oxoacyl-[acyl-carrier 93.3 0.16 5.6E-06 43.4 6.6 83 141-225 27-113 (270)
377 2dph_A Formaldehyde dismutase; 93.3 0.19 6.6E-06 45.5 7.4 48 134-181 178-228 (398)
378 1iy8_A Levodione reductase; ox 93.2 0.3 1E-05 41.4 8.2 83 141-225 12-100 (267)
379 3tsc_A Putative oxidoreductase 93.2 0.29 1E-05 41.8 8.2 83 141-225 10-109 (277)
380 3n74_A 3-ketoacyl-(acyl-carrie 93.2 0.35 1.2E-05 40.6 8.6 81 141-225 8-91 (261)
381 3k31_A Enoyl-(acyl-carrier-pro 93.2 0.14 4.6E-06 44.5 6.0 84 141-226 29-117 (296)
382 3rih_A Short chain dehydrogena 93.2 0.18 6.1E-06 43.8 6.8 83 141-225 40-127 (293)
383 3gvc_A Oxidoreductase, probabl 93.2 0.28 9.7E-06 42.1 8.0 81 141-225 28-111 (277)
384 1xkq_A Short-chain reductase f 93.2 0.27 9.2E-06 42.1 7.8 83 141-225 5-94 (280)
385 1geg_A Acetoin reductase; SDR 93.1 0.4 1.4E-05 40.3 8.8 82 142-225 2-87 (256)
386 3rwb_A TPLDH, pyridoxal 4-dehy 93.1 0.26 8.8E-06 41.4 7.5 81 141-225 5-88 (247)
387 3l6e_A Oxidoreductase, short-c 93.0 0.34 1.2E-05 40.4 8.0 80 142-225 3-85 (235)
388 3uf0_A Short-chain dehydrogena 93.0 0.28 9.7E-06 42.0 7.7 82 141-225 30-114 (273)
389 3ek2_A Enoyl-(acyl-carrier-pro 92.9 0.23 7.8E-06 42.0 7.0 83 141-225 13-100 (271)
390 4iin_A 3-ketoacyl-acyl carrier 92.9 0.28 9.4E-06 41.8 7.5 83 141-225 28-115 (271)
391 3oid_A Enoyl-[acyl-carrier-pro 92.9 0.35 1.2E-05 40.9 8.1 83 141-225 3-90 (258)
392 4dyv_A Short-chain dehydrogena 92.9 0.3 1E-05 41.8 7.7 81 141-225 27-110 (272)
393 3zv4_A CIS-2,3-dihydrobiphenyl 92.8 0.37 1.3E-05 41.3 8.2 81 141-225 4-87 (281)
394 2qq5_A DHRS1, dehydrogenase/re 92.8 0.28 9.4E-06 41.4 7.3 84 141-225 4-91 (260)
395 4dqx_A Probable oxidoreductase 92.8 0.42 1.4E-05 40.9 8.6 81 141-225 26-109 (277)
396 3nrc_A Enoyl-[acyl-carrier-pro 92.8 0.25 8.7E-06 42.3 7.1 81 141-226 25-112 (280)
397 3oec_A Carveol dehydrogenase ( 92.8 0.3 1E-05 42.7 7.7 83 141-225 45-143 (317)
398 3ai3_A NADPH-sorbose reductase 92.8 0.39 1.3E-05 40.5 8.2 83 141-225 6-93 (263)
399 3ged_A Short-chain dehydrogena 92.8 0.29 1E-05 41.6 7.3 78 143-225 3-83 (247)
400 2zat_A Dehydrogenase/reductase 92.7 0.33 1.1E-05 40.9 7.8 83 141-225 13-99 (260)
401 3s55_A Putative short-chain de 92.7 0.39 1.3E-05 41.0 8.2 83 141-225 9-107 (281)
402 3r24_A NSP16, 2'-O-methyl tran 92.6 0.28 9.7E-06 42.9 7.0 71 131-226 94-178 (344)
403 4dmm_A 3-oxoacyl-[acyl-carrier 92.6 0.33 1.1E-05 41.4 7.6 83 141-225 27-114 (269)
404 3op4_A 3-oxoacyl-[acyl-carrier 92.6 0.35 1.2E-05 40.6 7.6 81 141-225 8-91 (248)
405 2nwq_A Probable short-chain de 92.5 0.38 1.3E-05 41.1 7.9 81 143-225 22-105 (272)
406 2eih_A Alcohol dehydrogenase; 92.5 0.54 1.9E-05 41.5 9.1 95 138-243 163-260 (343)
407 3f1l_A Uncharacterized oxidore 92.5 0.33 1.1E-05 40.9 7.3 83 141-225 11-100 (252)
408 3v2h_A D-beta-hydroxybutyrate 92.5 0.54 1.8E-05 40.3 8.8 83 141-225 24-112 (281)
409 2z1n_A Dehydrogenase; reductas 92.5 0.51 1.7E-05 39.8 8.5 82 141-225 6-93 (260)
410 3grp_A 3-oxoacyl-(acyl carrier 92.5 0.42 1.4E-05 40.7 8.1 81 141-225 26-109 (266)
411 3edm_A Short chain dehydrogena 92.5 0.34 1.2E-05 40.9 7.5 83 141-225 7-94 (259)
412 1yxm_A Pecra, peroxisomal tran 92.4 0.44 1.5E-05 41.0 8.3 82 141-225 17-108 (303)
413 4dry_A 3-oxoacyl-[acyl-carrier 92.4 0.19 6.7E-06 43.2 5.9 83 141-225 32-119 (281)
414 1fmc_A 7 alpha-hydroxysteroid 92.4 0.33 1.1E-05 40.5 7.2 82 141-225 10-96 (255)
415 3a28_C L-2.3-butanediol dehydr 92.4 0.38 1.3E-05 40.5 7.6 82 142-225 2-89 (258)
416 2uvd_A 3-oxoacyl-(acyl-carrier 92.4 0.39 1.3E-05 40.2 7.6 83 141-225 3-90 (246)
417 3s2e_A Zinc-containing alcohol 92.4 0.38 1.3E-05 42.4 7.8 50 133-182 158-209 (340)
418 2c07_A 3-oxoacyl-(acyl-carrier 92.3 0.54 1.9E-05 40.2 8.7 82 141-225 43-129 (285)
419 1w6u_A 2,4-dienoyl-COA reducta 92.3 0.57 2E-05 40.2 8.8 82 141-225 25-112 (302)
420 3f9i_A 3-oxoacyl-[acyl-carrier 92.3 0.48 1.6E-05 39.5 8.2 78 141-226 13-93 (249)
421 1rjw_A ADH-HT, alcohol dehydro 92.3 0.76 2.6E-05 40.5 9.8 100 133-244 156-257 (339)
422 2a4k_A 3-oxoacyl-[acyl carrier 92.3 0.46 1.6E-05 40.3 8.0 81 141-225 5-88 (263)
423 4ej6_A Putative zinc-binding d 92.3 0.61 2.1E-05 41.7 9.2 101 134-244 175-280 (370)
424 1yde_A Retinal dehydrogenase/r 92.2 0.5 1.7E-05 40.2 8.3 80 141-225 8-90 (270)
425 3ijr_A Oxidoreductase, short c 92.2 0.43 1.5E-05 41.2 7.9 83 141-225 46-133 (291)
426 4fc7_A Peroxisomal 2,4-dienoyl 92.2 0.43 1.5E-05 40.8 7.8 83 141-225 26-113 (277)
427 1rjd_A PPM1P, carboxy methyl t 92.2 0.49 1.7E-05 42.0 8.3 60 141-201 97-181 (334)
428 1e7w_A Pteridine reductase; di 92.2 0.51 1.7E-05 40.7 8.3 60 141-200 8-73 (291)
429 3oig_A Enoyl-[acyl-carrier-pro 92.1 0.49 1.7E-05 39.9 8.1 84 141-226 6-96 (266)
430 3dii_A Short-chain dehydrogena 92.1 0.39 1.3E-05 40.2 7.3 79 142-225 2-83 (247)
431 2pnf_A 3-oxoacyl-[acyl-carrier 92.1 0.55 1.9E-05 38.9 8.3 82 141-225 6-93 (248)
432 1xu9_A Corticosteroid 11-beta- 92.1 0.28 9.5E-06 42.1 6.5 81 141-224 27-113 (286)
433 1xhl_A Short-chain dehydrogena 92.1 0.36 1.2E-05 41.8 7.2 83 141-225 25-114 (297)
434 2cfc_A 2-(R)-hydroxypropyl-COM 92.0 0.55 1.9E-05 39.0 8.1 81 142-225 2-88 (250)
435 1spx_A Short-chain reductase f 92.0 0.44 1.5E-05 40.5 7.6 83 141-225 5-94 (278)
436 1xq1_A Putative tropinone redu 92.0 0.58 2E-05 39.3 8.3 83 141-225 13-100 (266)
437 3l77_A Short-chain alcohol deh 91.9 0.48 1.6E-05 39.1 7.6 82 142-225 2-88 (235)
438 3ak4_A NADH-dependent quinucli 91.9 0.53 1.8E-05 39.7 7.9 81 141-225 11-94 (263)
439 2gdz_A NAD+-dependent 15-hydro 91.8 0.53 1.8E-05 39.7 7.9 83 141-225 6-94 (267)
440 4gkb_A 3-oxoacyl-[acyl-carrier 91.8 0.26 8.8E-06 42.2 5.9 83 141-225 6-91 (258)
441 1mxh_A Pteridine reductase 2; 91.8 0.5 1.7E-05 40.1 7.8 82 141-225 10-102 (276)
442 1vl8_A Gluconate 5-dehydrogena 91.8 0.46 1.6E-05 40.4 7.5 83 141-225 20-107 (267)
443 1qor_A Quinone oxidoreductase; 91.8 0.57 2E-05 40.9 8.3 98 136-244 135-235 (327)
444 1wma_A Carbonyl reductase [NAD 91.6 0.49 1.7E-05 39.7 7.5 82 141-225 3-90 (276)
445 3rku_A Oxidoreductase YMR226C; 91.5 0.51 1.8E-05 40.7 7.6 83 141-225 32-123 (287)
446 2qhx_A Pteridine reductase 1; 91.5 0.62 2.1E-05 41.0 8.3 60 141-200 45-110 (328)
447 1cdo_A Alcohol dehydrogenase; 91.5 0.85 2.9E-05 40.7 9.3 101 135-244 186-290 (374)
448 3i1j_A Oxidoreductase, short c 91.5 0.54 1.8E-05 39.1 7.5 83 141-225 13-102 (247)
449 3rd5_A Mypaa.01249.C; ssgcid, 91.5 0.49 1.7E-05 40.6 7.4 77 141-225 15-94 (291)
450 1hxh_A 3BETA/17BETA-hydroxyste 91.4 0.54 1.8E-05 39.5 7.5 81 141-225 5-88 (253)
451 3abi_A Putative uncharacterize 91.4 0.28 9.5E-06 44.0 5.9 88 143-247 17-107 (365)
452 3jyn_A Quinone oxidoreductase; 91.4 0.62 2.1E-05 40.7 8.1 96 137-243 136-234 (325)
453 1xg5_A ARPG836; short chain de 91.3 0.59 2E-05 39.8 7.7 82 141-225 31-119 (279)
454 3jv7_A ADH-A; dehydrogenase, n 91.3 0.74 2.5E-05 40.6 8.6 96 138-244 168-266 (345)
455 3tzq_B Short-chain type dehydr 91.2 0.43 1.5E-05 40.6 6.7 81 141-225 10-93 (271)
456 2fzw_A Alcohol dehydrogenase c 91.2 1.1 3.7E-05 39.9 9.6 101 135-244 184-288 (373)
457 3uko_A Alcohol dehydrogenase c 91.2 0.66 2.2E-05 41.6 8.2 101 135-244 187-291 (378)
458 2bd0_A Sepiapterin reductase; 91.1 0.8 2.7E-05 37.9 8.2 81 142-225 2-94 (244)
459 2d8a_A PH0655, probable L-thre 91.1 0.67 2.3E-05 41.0 8.1 99 135-244 162-263 (348)
460 1vj0_A Alcohol dehydrogenase, 91.1 1.1 3.6E-05 40.2 9.5 103 135-244 188-294 (380)
461 2jhf_A Alcohol dehydrogenase E 91.1 1.1 3.7E-05 40.0 9.5 101 135-244 185-289 (374)
462 1kol_A Formaldehyde dehydrogen 91.0 0.62 2.1E-05 42.0 7.9 47 135-181 179-228 (398)
463 1gee_A Glucose 1-dehydrogenase 91.0 0.55 1.9E-05 39.3 7.1 82 141-225 6-93 (261)
464 3tpc_A Short chain alcohol deh 90.9 0.29 1E-05 41.2 5.3 81 141-225 6-89 (257)
465 4b7c_A Probable oxidoreductase 90.9 0.21 7.1E-06 44.0 4.5 82 135-226 143-227 (336)
466 1m6e_X S-adenosyl-L-methionnin 90.9 0.2 6.7E-06 45.2 4.3 77 143-231 53-153 (359)
467 3r3s_A Oxidoreductase; structu 90.8 0.47 1.6E-05 41.0 6.6 83 141-225 48-136 (294)
468 1hdc_A 3-alpha, 20 beta-hydrox 90.8 0.64 2.2E-05 39.0 7.4 81 141-225 4-87 (254)
469 1nff_A Putative oxidoreductase 90.8 0.85 2.9E-05 38.5 8.1 81 141-225 6-89 (260)
470 3osu_A 3-oxoacyl-[acyl-carrier 90.6 0.75 2.6E-05 38.4 7.6 82 142-225 4-90 (246)
471 3gk3_A Acetoacetyl-COA reducta 90.6 0.76 2.6E-05 38.9 7.7 83 141-225 24-111 (269)
472 1x1t_A D(-)-3-hydroxybutyrate 90.5 0.44 1.5E-05 40.2 6.1 83 141-225 3-91 (260)
473 3qwb_A Probable quinone oxidor 90.5 0.71 2.4E-05 40.5 7.6 97 137-244 144-243 (334)
474 2o23_A HADH2 protein; HSD17B10 90.5 0.62 2.1E-05 39.0 7.0 80 141-225 11-94 (265)
475 1uuf_A YAHK, zinc-type alcohol 90.5 0.54 1.8E-05 42.1 6.9 48 134-181 187-236 (369)
476 3asu_A Short-chain dehydrogena 90.5 0.95 3.2E-05 37.9 8.1 78 144-225 2-82 (248)
477 3ip1_A Alcohol dehydrogenase, 90.5 1.5 5.2E-05 39.6 10.0 97 138-244 210-314 (404)
478 2x9g_A PTR1, pteridine reducta 90.5 0.54 1.8E-05 40.3 6.6 83 141-225 22-114 (288)
479 3is3_A 17BETA-hydroxysteroid d 90.3 0.72 2.5E-05 39.1 7.3 83 141-225 17-104 (270)
480 3qlj_A Short chain dehydrogena 90.3 0.3 1E-05 42.8 5.0 83 141-225 26-122 (322)
481 3afn_B Carbonyl reductase; alp 90.2 0.38 1.3E-05 40.1 5.3 83 141-226 6-94 (258)
482 2pd6_A Estradiol 17-beta-dehyd 90.1 0.89 3E-05 38.0 7.6 83 141-225 6-100 (264)
483 1oaa_A Sepiapterin reductase; 90.1 0.84 2.9E-05 38.3 7.5 85 141-225 5-100 (259)
484 1wly_A CAAR, 2-haloacrylate re 90.0 1.3 4.5E-05 38.7 9.0 98 136-244 140-240 (333)
485 1ja9_A 4HNR, 1,3,6,8-tetrahydr 90.0 0.73 2.5E-05 38.7 7.1 82 141-225 20-107 (274)
486 2ehd_A Oxidoreductase, oxidore 89.8 0.97 3.3E-05 37.1 7.5 78 142-225 5-86 (234)
487 3ksu_A 3-oxoacyl-acyl carrier 89.8 0.69 2.4E-05 39.1 6.7 83 141-225 10-99 (262)
488 2hq1_A Glucose/ribitol dehydro 89.8 0.61 2.1E-05 38.6 6.3 82 141-225 4-91 (247)
489 3v2g_A 3-oxoacyl-[acyl-carrier 89.8 1.1 3.6E-05 38.2 7.9 83 141-225 30-117 (271)
490 3m1a_A Putative dehydrogenase; 89.8 0.6 2.1E-05 39.7 6.4 81 141-225 4-87 (281)
491 4e3z_A Putative oxidoreductase 89.7 0.71 2.4E-05 39.1 6.8 83 141-225 25-112 (272)
492 2wsb_A Galactitol dehydrogenas 89.7 1.3 4.6E-05 36.6 8.4 79 141-225 10-93 (254)
493 3t4x_A Oxidoreductase, short c 89.7 0.96 3.3E-05 38.2 7.5 79 141-225 9-93 (267)
494 4f3n_A Uncharacterized ACR, CO 89.7 0.35 1.2E-05 44.6 4.9 64 121-184 109-187 (432)
495 3sc4_A Short chain dehydrogena 89.5 0.35 1.2E-05 41.5 4.7 83 141-225 8-101 (285)
496 3pvc_A TRNA 5-methylaminomethy 89.5 0.65 2.2E-05 45.2 7.0 33 141-173 58-104 (689)
497 1lss_A TRK system potassium up 89.4 3.6 0.00012 30.3 9.9 72 143-228 5-80 (140)
498 1pqw_A Polyketide synthase; ro 89.3 0.47 1.6E-05 38.1 5.1 45 137-181 34-81 (198)
499 3l4b_C TRKA K+ channel protien 89.3 1.1 3.7E-05 36.7 7.3 73 145-231 3-79 (218)
500 1yqd_A Sinapyl alcohol dehydro 89.2 1 3.5E-05 40.2 7.7 51 133-183 178-231 (366)
No 1
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.97 E-value=3.7e-30 Score=226.90 Aligned_cols=166 Identities=29% Similarity=0.448 Sum_probs=153.1
Q ss_pred HHHHHHHHHhcCCCCCcccCccccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 023482 101 YHATIKALNSKGRFPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVR 180 (281)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~ 180 (281)
...+.+.+.++++.+++.+||||..++.+++.+++.+.+.++ +|||||||+|.+|..+++.+.+|+|+|+|+.+++.++
T Consensus 7 ~~~~~~~~~~~~~~~~k~~GQnfL~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~ 85 (271)
T 3fut_A 7 PQSVRALLERHGLFADKRFGQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLE 85 (271)
T ss_dssp HHHHHHHHHHTTCCCSTTSSCCEECCHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred HHHHHHHHHhcCCCccccCCccccCCHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHH
Confidence 345567788889999999999999999999999999999988 9999999999999999999999999999999999999
Q ss_pred HHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCCccEEEEcCCCcccHHHHHHhccCCCCcceEEEeehhhHHHHhc
Q 023482 181 ERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFSEVVLLLQEETALRLV 260 (281)
Q Consensus 181 ~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~~~~~~~~~~~~a~rl~ 260 (281)
+++.. ++++++++|+.++++++ ...+|.||+|+||++.++++.+++.. ..+..+++|+|+|++.|++
T Consensus 86 ~~~~~-~~v~vi~~D~l~~~~~~-----------~~~~~~iv~NlPy~iss~il~~ll~~-~~~~~~~lm~QkEva~Rl~ 152 (271)
T 3fut_A 86 ETLSG-LPVRLVFQDALLYPWEE-----------VPQGSLLVANLPYHIATPLVTRLLKT-GRFARLVFLVQKEVAERMT 152 (271)
T ss_dssp HHTTT-SSEEEEESCGGGSCGGG-----------SCTTEEEEEEECSSCCHHHHHHHHHH-CCEEEEEEEEEHHHHHHHT
T ss_pred HhcCC-CCEEEEECChhhCChhh-----------ccCccEEEecCcccccHHHHHHHhcC-CCCCEEEEEeeeeeeeecc
Confidence 98873 58999999999988643 13589999999999999999999988 8889999999999999999
Q ss_pred CCCCCCCccchhhhhhhhccC
Q 023482 261 EPSLRTSEYRPINIFVNFYSG 281 (281)
Q Consensus 261 ~~~pg~~~y~~~s~l~~~~~~ 281 (281)
+.||++.|+++|+++|+||+
T Consensus 153 -A~pg~k~yg~lSv~~q~~~~ 172 (271)
T 3fut_A 153 -ARPKTPAYGVLTLRVAHHAV 172 (271)
T ss_dssp -CCTTSTTCSHHHHHHHHHEE
T ss_pred -cCCCCCcccHHHHHHHHHee
Confidence 99999999999999999985
No 2
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.97 E-value=3.6e-30 Score=225.26 Aligned_cols=158 Identities=25% Similarity=0.508 Sum_probs=139.7
Q ss_pred CCCcccCccccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEE
Q 023482 114 FPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQ 193 (281)
Q Consensus 114 ~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~ 193 (281)
.+++.+||||..++.+++.+++.+.+.++++|||||||+|.+|..+++.+.+|+|+|+|+.+++.+++++...+++++++
T Consensus 2 ~~~k~~GQnFL~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~~~~v~~i~ 81 (255)
T 3tqs_A 2 PMRKRFGQHFLHDSFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQQKNITIYQ 81 (255)
T ss_dssp -------CCEECCHHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTTCTTEEEEE
T ss_pred CCCCcCCcccccCHHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhhCCCcEEEE
Confidence 46788999999999999999999999999999999999999999999998999999999999999999987666999999
Q ss_pred cCccccccccchhhHHHhhcCCCCccEEEEcCCCcccHHHHHHhccCCCCcceEEEeehhhHHHHhcCCCCCCCccchhh
Q 023482 194 EDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFSEVVLLLQEETALRLVEPSLRTSEYRPIN 273 (281)
Q Consensus 194 gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~~~~~~~~~~~~a~rl~~~~pg~~~y~~~s 273 (281)
+|+.++++++. ...+.|| ||+|+||++.++++.++++....+..+++|+|+|++.|++ +.||++.|+++|
T Consensus 82 ~D~~~~~~~~~--------~~~~~~~-vv~NlPY~is~~il~~ll~~~~~~~~~~lm~QkEva~Rl~-a~pg~k~yg~ls 151 (255)
T 3tqs_A 82 NDALQFDFSSV--------KTDKPLR-VVGNLPYNISTPLLFHLFSQIHCIEDMHFMLQKEVVRRIT-AEVGSHDYGRLS 151 (255)
T ss_dssp SCTTTCCGGGS--------CCSSCEE-EEEECCHHHHHHHHHHHHHTGGGEEEEEEEEEHHHHHHHT-CCTTSTTCSHHH
T ss_pred cchHhCCHHHh--------ccCCCeE-EEecCCcccCHHHHHHHHhCCCChheEEEEEeHHHHHHhh-CCCCCCccchhh
Confidence 99999987531 1124577 9999999999999999999888899999999999999999 999999999999
Q ss_pred hhhhhccC
Q 023482 274 IFVNFYSG 281 (281)
Q Consensus 274 ~l~~~~~~ 281 (281)
+++|+||+
T Consensus 152 v~~q~~~~ 159 (255)
T 3tqs_A 152 VMAQYFCD 159 (255)
T ss_dssp HHHHHHEE
T ss_pred heeeeeEE
Confidence 99999985
No 3
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.96 E-value=6.8e-29 Score=219.85 Aligned_cols=161 Identities=25% Similarity=0.493 Sum_probs=140.8
Q ss_pred CCCCCcccCccccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCE----EEEEeCCHHHHHHHHHHhcCCC
Q 023482 112 GRFPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGAT----VLAIEKDQHMVGLVRERFASID 187 (281)
Q Consensus 112 ~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~----v~gvD~s~~~l~~a~~~~~~~~ 187 (281)
++.+++.+||||..++.+++.+++.+.+.++++|||||||+|.+|..+++.+.+ |+|+|+|+.+++.++++. .+
T Consensus 13 ~~~~~k~~GQ~fL~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--~~ 90 (279)
T 3uzu_A 13 GHFARKRFGQNFLVDHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--GE 90 (279)
T ss_dssp -----CCCSCCEECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--GG
T ss_pred CCCccccCCccccCCHHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--CC
Confidence 678899999999999999999999999999999999999999999999998666 999999999999999884 45
Q ss_pred CeEEEEcCccccccccchhhHHHhhcCCCCccEEEEcCCCcccHHHHHHhccCCCCcceEEEeehhhHHHHhcCCCCCCC
Q 023482 188 QLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFSEVVLLLQEETALRLVEPSLRTS 267 (281)
Q Consensus 188 ~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~~~~~~~~~~~~a~rl~~~~pg~~ 267 (281)
+++++++|+.++++++.. + ......+.||+|+||++.++++.++++....+..+++|+|+|++.|++ +.||++
T Consensus 91 ~v~~i~~D~~~~~~~~~~-~-----~~~~~~~~vv~NlPY~iss~il~~ll~~~~~~~~~~~m~QkEva~Rl~-A~pg~k 163 (279)
T 3uzu_A 91 LLELHAGDALTFDFGSIA-R-----PGDEPSLRIIGNLPYNISSPLLFHLMSFAPVVIDQHFMLQNEVVERMV-AEPGTK 163 (279)
T ss_dssp GEEEEESCGGGCCGGGGS-C-----SSSSCCEEEEEECCHHHHHHHHHHHGGGGGGEEEEEEEEEHHHHHHHT-CCTTST
T ss_pred CcEEEECChhcCChhHhc-c-----cccCCceEEEEccCccccHHHHHHHHhccCCccEEEEEeeHHHHHHHh-CCCCCC
Confidence 899999999999876421 0 000145789999999999999999999888899999999999999999 999999
Q ss_pred ccchhhhhhhhccC
Q 023482 268 EYRPINIFVNFYSG 281 (281)
Q Consensus 268 ~y~~~s~l~~~~~~ 281 (281)
.|+++||++|+||+
T Consensus 164 ~yg~lSv~~q~~~~ 177 (279)
T 3uzu_A 164 AFSRLSVMLQYRYV 177 (279)
T ss_dssp TCCHHHHHHHHHEE
T ss_pred cccHHHHHHhhheE
Confidence 99999999999985
No 4
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.95 E-value=5.4e-28 Score=215.46 Aligned_cols=159 Identities=28% Similarity=0.424 Sum_probs=136.3
Q ss_pred HHhcCCCCCcccCccccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCC
Q 023482 108 LNSKGRFPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID 187 (281)
Q Consensus 108 ~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~ 187 (281)
..++++.+++.+||||..++.+++.+++.+.+.++++|||||||+|.+|..+++.+.+|+|||+|+.+++.+++++...+
T Consensus 17 ~~~~~~~~~k~~GQnfL~d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~~~~ 96 (295)
T 3gru_A 17 RGSHMFKPKKKLGQCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKELYN 96 (295)
T ss_dssp -------------CCEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHHHCS
T ss_pred hHhcCCCCccccCccccCCHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhccCC
Confidence 45568899999999999999999999999999999999999999999999999998899999999999999999987556
Q ss_pred CeEEEEcCccccccccchhhHHHhhcCCCCccEEEEcCCCcccHHHHHHhccCCCCcceEEEeehhhHHHHhcCCCCCCC
Q 023482 188 QLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFSEVVLLLQEETALRLVEPSLRTS 267 (281)
Q Consensus 188 ~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~~~~~~~~~~~~a~rl~~~~pg~~ 267 (281)
+++++++|+.++++++ ..||+|++|+||++..+++.++++. .+..+.+|.|+|++.|++ +.||++
T Consensus 97 ~v~vi~gD~l~~~~~~------------~~fD~Iv~NlPy~is~pil~~lL~~--~~~~~~lm~Q~eva~Rl~-a~pg~k 161 (295)
T 3gru_A 97 NIEIIWGDALKVDLNK------------LDFNKVVANLPYQISSPITFKLIKR--GFDLAVLMYQYEFAKRMV-AAAGTK 161 (295)
T ss_dssp SEEEEESCTTTSCGGG------------SCCSEEEEECCGGGHHHHHHHHHHH--CCSEEEEEEEHHHHHHHH-CCTTST
T ss_pred CeEEEECchhhCCccc------------CCccEEEEeCcccccHHHHHHHHhc--ccceEEEeeecccccEEE-ecCCCc
Confidence 9999999999987643 4689999999999999999999985 377899999999999999 999999
Q ss_pred ccchhhhhhhhccC
Q 023482 268 EYRPINIFVNFYSG 281 (281)
Q Consensus 268 ~y~~~s~l~~~~~~ 281 (281)
.|+++|+++|+||+
T Consensus 162 ~yg~Lsv~~q~~~~ 175 (295)
T 3gru_A 162 DYGRLSVAVQSRAD 175 (295)
T ss_dssp TCSHHHHHHHTTEE
T ss_pred chhHHHHHHHhhcc
Confidence 99999999999985
No 5
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.93 E-value=4.2e-26 Score=198.91 Aligned_cols=152 Identities=30% Similarity=0.447 Sum_probs=134.8
Q ss_pred CCCCcccCccccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhcCCCCeEE
Q 023482 113 RFPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG-ATVLAIEKDQHMVGLVRERFASIDQLKV 191 (281)
Q Consensus 113 ~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~-~~v~gvD~s~~~l~~a~~~~~~~~~v~~ 191 (281)
+.+++.|||||..++.+++.+++.+.+.++++|||||||+|.+|..+++.+ .+|+|+|+|+.+++.++++ ...++++
T Consensus 3 ~~~~k~~GQnfl~d~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~--~~~~v~~ 80 (249)
T 3ftd_A 3 VRLKKSFGQHLLVSEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI--GDERLEV 80 (249)
T ss_dssp -----CCCSSCEECHHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS--CCTTEEE
T ss_pred CCCCCcccccccCCHHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc--cCCCeEE
Confidence 567889999999999999999999999899999999999999999999995 7999999999999999887 3458999
Q ss_pred EEcCccccccccchhhHHHhhcCCCCccEEEEcCCCcccHHHHHHhccCCCCcceEEEeehhhHHHHhcCCCCCCCccch
Q 023482 192 LQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFSEVVLLLQEETALRLVEPSLRTSEYRP 271 (281)
Q Consensus 192 ~~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~~~~~~~~~~~~a~rl~~~~pg~~~y~~ 271 (281)
+++|+.++++++. . + ...|++|+||++.++++.++++....+..+++|+|+|++.|++ + ++.|++
T Consensus 81 i~~D~~~~~~~~~---------~-~-~~~vv~NlPy~i~~~il~~ll~~~~~~~~~~~m~Qkeva~Rl~-a---~k~yg~ 145 (249)
T 3ftd_A 81 INEDASKFPFCSL---------G-K-ELKVVGNLPYNVASLIIENTVYNKDCVPLAVFMVQKEVAEKLQ-G---KKDTGW 145 (249)
T ss_dssp ECSCTTTCCGGGS---------C-S-SEEEEEECCTTTHHHHHHHHHHTGGGCSEEEEEEEHHHHHHHH-T---SSCCCH
T ss_pred EEcchhhCChhHc---------c-C-CcEEEEECchhccHHHHHHHHhcCCCCceEEEEEeHHHHHHhh-c---cccccH
Confidence 9999999987541 1 2 3489999999999999999999888899999999999999999 4 999999
Q ss_pred hhhhhhhccC
Q 023482 272 INIFVNFYSG 281 (281)
Q Consensus 272 ~s~l~~~~~~ 281 (281)
+|+++|+||+
T Consensus 146 lsv~~q~~~~ 155 (249)
T 3ftd_A 146 LSVFVRTFYD 155 (249)
T ss_dssp HHHHHHHHEE
T ss_pred HHHHHHhHEE
Confidence 9999999985
No 6
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=99.93 E-value=2.6e-26 Score=200.51 Aligned_cols=151 Identities=23% Similarity=0.401 Sum_probs=133.8
Q ss_pred ccccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccc
Q 023482 121 QHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGAT--VLAIEKDQHMVGLVRERFASIDQLKVLQEDFVK 198 (281)
Q Consensus 121 ~~~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~--v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~ 198 (281)
|||..++.+++.+++.+.+.++++|||||||+|.+|. ++. +.+ |+|+|+|+.|++.++++....++++++++|+.+
T Consensus 1 QnfL~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~ 78 (252)
T 1qyr_A 1 QNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMT 78 (252)
T ss_dssp CCEECCHHHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGG
T ss_pred CCCcCCHHHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhh
Confidence 6899999999999999999889999999999999999 654 567 999999999999999887655689999999999
Q ss_pred cccccchhhHHHhhcCCCCccEEEEcCCCcccHHHHHHhccCCCCcceEEEeehhhHHHHhcCCCCCCCccchhhhhhhh
Q 023482 199 CHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFSEVVLLLQEETALRLVEPSLRTSEYRPINIFVNF 278 (281)
Q Consensus 199 ~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~~~~~~~~~~~~a~rl~~~~pg~~~y~~~s~l~~~ 278 (281)
+++.+. +|+ .+..+.||+|+||++.++++.+++.....+..+++|+|+|++.|++ +.||++.||++|+++|+
T Consensus 79 ~~~~~~-~~~------~~~~~~vvsNlPY~i~~~il~~ll~~~~~~~~~~~m~QkEva~Rl~-a~pG~k~yg~lsv~~q~ 150 (252)
T 1qyr_A 79 FNFGEL-AEK------MGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLV-AGPNSKAYGRLSVMAQY 150 (252)
T ss_dssp CCHHHH-HHH------HTSCEEEEEECCTTTHHHHHHHHHTTGGGEEEEEEEEEHHHHHHHH-CCTTSTTCSHHHHHHHH
T ss_pred CCHHHh-hcc------cCCceEEEECCCCCccHHHHHHHHhcCCCcceEEEEEeHHHHHHhc-CCCCCccccHHHHHHHH
Confidence 886532 111 1346899999999999999999998777889999999999999999 99999999999999999
Q ss_pred ccC
Q 023482 279 YSG 281 (281)
Q Consensus 279 ~~~ 281 (281)
+|+
T Consensus 151 ~~~ 153 (252)
T 1qyr_A 151 YCN 153 (252)
T ss_dssp HEE
T ss_pred Hhe
Confidence 874
No 7
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.91 E-value=6.1e-24 Score=188.76 Aligned_cols=151 Identities=33% Similarity=0.508 Sum_probs=135.6
Q ss_pred CcccCccccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC---CCeEEE
Q 023482 116 RKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI---DQLKVL 192 (281)
Q Consensus 116 ~~~~g~~~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~ 192 (281)
++.+||+|..++.+++.+++.+.+.++.+|||||||+|.++..+++.+.+|+|+|+|+.+++.++++.... ++++++
T Consensus 3 ~k~~gq~fl~d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~ 82 (285)
T 1zq9_A 3 NTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVL 82 (285)
T ss_dssp -----CCEECCHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEE
T ss_pred CCCCCcCccCCHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEE
Confidence 46789999999999999999999988999999999999999999999889999999999999999988654 389999
Q ss_pred EcCccccccccchhhHHHhhcCCCCccEEEEcCCCcccHHHHHHhccCCCCcceEEEeehhhHHHHhcCCCCCCCccchh
Q 023482 193 QEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFSEVVLLLQEETALRLVEPSLRTSEYRPI 272 (281)
Q Consensus 193 ~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~~~~~~~~~~~~a~rl~~~~pg~~~y~~~ 272 (281)
++|+.++++ ..||.|++|+||++.++++.+++.....+..++.|+|+|++.|++ ..||++.|+.+
T Consensus 83 ~~D~~~~~~--------------~~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~v-lkPGg~~y~~l 147 (285)
T 1zq9_A 83 VGDVLKTDL--------------PFFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLV-AKPGDKLYCRL 147 (285)
T ss_dssp ESCTTTSCC--------------CCCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHH-CCTTCTTCSHH
T ss_pred Ecceecccc--------------hhhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHh-cCCCCcccchh
Confidence 999998764 368999999999999999999998888899999999999999988 89999999999
Q ss_pred hhhhhhccC
Q 023482 273 NIFVNFYSG 281 (281)
Q Consensus 273 s~l~~~~~~ 281 (281)
+++.|++++
T Consensus 148 sv~~~~~~~ 156 (285)
T 1zq9_A 148 SINTQLLAR 156 (285)
T ss_dssp HHHHHHHEE
T ss_pred hhhhhhhhh
Confidence 999998863
No 8
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.91 E-value=6.9e-24 Score=189.64 Aligned_cols=155 Identities=35% Similarity=0.509 Sum_probs=130.6
Q ss_pred CCCCCcccCccccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC--CCe
Q 023482 112 GRFPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI--DQL 189 (281)
Q Consensus 112 ~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~--~~v 189 (281)
+..+.+.+||+|..++.+++.+++.+.+.++++|||||||+|.++..+++.+.+|+|+|+|+.+++.|+++.... +++
T Consensus 13 ~~~~~k~~Gq~fl~~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~~~~~v 92 (299)
T 2h1r_A 13 GRENLYFQGQHLLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEGYNNL 92 (299)
T ss_dssp ----------CEECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTTCCCE
T ss_pred cccchhccccceecCHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCce
Confidence 456788999999999999999999999888999999999999999999998889999999999999999987533 589
Q ss_pred EEEEcCccccccccchhhHHHhhcCCCCccEEEEcCCCcccHHHHHHhccCCCCcceEEEeehhhHHHHhcCCCCCCCcc
Q 023482 190 KVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFSEVVLLLQEETALRLVEPSLRTSEY 269 (281)
Q Consensus 190 ~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~~~~~~~~~~~~a~rl~~~~pg~~~y 269 (281)
+++++|+.++++ +.||+|++|+||++..+++.++++....+..+++++|++.+.|++ +.||...|
T Consensus 93 ~~~~~D~~~~~~--------------~~~D~Vv~n~py~~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rll-a~~G~~~y 157 (299)
T 2h1r_A 93 EVYEGDAIKTVF--------------PKFDVCTANIPYKISSPLIFKLISHRPLFKCAVLMFQKEFAERML-ANVGDSNY 157 (299)
T ss_dssp EC----CCSSCC--------------CCCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHT-CCTTSTTC
T ss_pred EEEECchhhCCc--------------ccCCEEEEcCCcccccHHHHHHHhcCCccceeeehHHHHHHHHHh-cCCCCcch
Confidence 999999998763 468999999999999999999999888899999999999999999 99999999
Q ss_pred chhhhhhhhccC
Q 023482 270 RPINIFVNFYSG 281 (281)
Q Consensus 270 ~~~s~l~~~~~~ 281 (281)
+.+++.+|++++
T Consensus 158 ~~ls~~~~~~~~ 169 (299)
T 2h1r_A 158 SRLTINVKLFCK 169 (299)
T ss_dssp CHHHHHHHHHEE
T ss_pred hHHHHHHHHhhc
Confidence 999999999873
No 9
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=99.89 E-value=4.2e-23 Score=187.60 Aligned_cols=163 Identities=18% Similarity=0.199 Sum_probs=134.9
Q ss_pred CCCCcccCccccCCHHHHHHHHHHhcCCC------CCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhc
Q 023482 113 RFPRKSLGQHYMLNSEINDQLAAAAAVQE------GDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFA 184 (281)
Q Consensus 113 ~~~~~~~g~~~~~~~~~~~~l~~~l~~~~------~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~ 184 (281)
..+++.|||||+.++.+++.+++.+++.+ ++.|||||+|.|.+|..|++. ..+|++||+|+.++...++..
T Consensus 24 ~~~kk~lGQnFL~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~- 102 (353)
T 1i4w_A 24 SKLKFFYGFKYLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF- 102 (353)
T ss_dssp CSSCCGGGCCCBCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-
T ss_pred cCCCCCCCcCccCCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-
Confidence 35788999999999999999999998764 589999999999999999986 569999999999999998877
Q ss_pred CCCCeEEEEcCccccc-cccchhhHHHh--hc-----CC---CCccEEEEcCCCcccHHHHHHhccCCC--------Ccc
Q 023482 185 SIDQLKVLQEDFVKCH-IRSHMLSLFER--RK-----SS---SGFAKVVANIPFNISTDVIKQLLPMGD--------IFS 245 (281)
Q Consensus 185 ~~~~v~~~~gD~~~~~-~~d~~~d~v~~--~~-----~~---~~~d~Vi~n~P~~~~~~~~~~ll~~~~--------~~~ 245 (281)
..++++++++|+.+++ +. +++.. +. .. .....||+|+||++.++++.+++.... .+.
T Consensus 103 ~~~~l~ii~~D~l~~~~~~----~l~~~~~l~~~~~~~~~~~~~~~~vvaNLPYnIstpil~~ll~~~~~~~~l~~~~~~ 178 (353)
T 1i4w_A 103 EGSPLQILKRDPYDWSTYS----NLIDEERIFVPEVQSSDHINDKFLTVANVTGEGSEGLIMQWLSCIGNKNWLYRFGKV 178 (353)
T ss_dssp TTSSCEEECSCTTCHHHHH----HHTTTTCSSCCCCCCTTSEEEEEEEEEECCSTTHHHHHHHHHHHHHHTCGGGGGSEE
T ss_pred cCCCEEEEECCccchhhHH----HhhcccccccccccccccCCCceEEEEECCCchHHHHHHHHHHhccccccccccCcc
Confidence 4579999999997764 21 11100 00 00 012489999999999999999987422 346
Q ss_pred eEEEeehhhHHHHhcCCCCCCCccchhhhhhhhccC
Q 023482 246 EVVLLLQEETALRLVEPSLRTSEYRPINIFVNFYSG 281 (281)
Q Consensus 246 ~~~~~~~~~~a~rl~~~~pg~~~y~~~s~l~~~~~~ 281 (281)
.+++|+|+|+|.||+ +.||++.|+++||++|+||+
T Consensus 179 ~m~lmvQkEvA~Rl~-A~PGsk~yg~LSV~~q~~~~ 213 (353)
T 1i4w_A 179 KMLLWMPSTTARKLL-ARPGMHSRSKCSVVREAFTD 213 (353)
T ss_dssp EEEEEEEHHHHHHHH-CCTTSTTCCHHHHHHHHHEE
T ss_pred eEEEEeEHHHHHHhc-CCCCCccccHHHHHHHHHcc
Confidence 899999999999999 99999999999999999985
No 10
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.88 E-value=5.8e-22 Score=172.13 Aligned_cols=149 Identities=26% Similarity=0.422 Sum_probs=125.4
Q ss_pred CCCcccCccccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEE
Q 023482 114 FPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQ 193 (281)
Q Consensus 114 ~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~ 193 (281)
.+++.|||+|..++.+++.+++.+.+.++.+|||||||+|.++..+++.+.+|+|+|+|+.+++.++++....+++++++
T Consensus 3 ~~~k~~gQ~fl~d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~ 82 (244)
T 1qam_A 3 EKNIKHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVDHDNFQVLN 82 (244)
T ss_dssp -------CCBCCCHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTTCCSEEEEC
T ss_pred CCCccCCccccCCHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhccCCCeEEEE
Confidence 46778999999999999999999998888999999999999999999999999999999999999999987667999999
Q ss_pred cCccccccccchhhHHHhhcCCCCccEEEEcCCCcccHHHHHHhccCCCCcceEEEeehhhHHHHhcCCCCCCCccchhh
Q 023482 194 EDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFSEVVLLLQEETALRLVEPSLRTSEYRPIN 273 (281)
Q Consensus 194 gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~~~~~~~~~~~~a~rl~~~~pg~~~y~~~s 273 (281)
+|+.++++.+ ...| .|++|+||++.++++.+++.. .....+++|+|+|.+.|+. +.| |.++
T Consensus 83 ~D~~~~~~~~-----------~~~~-~vv~nlPy~~~~~~l~~~l~~-~~~~~~~lm~q~e~a~rll-~~~-----G~l~ 143 (244)
T 1qam_A 83 KDILQFKFPK-----------NQSY-KIFGNIPYNISTDIIRKIVFD-SIADEIYLIVEYGFAKRLL-NTK-----RSLA 143 (244)
T ss_dssp CCGGGCCCCS-----------SCCC-EEEEECCGGGHHHHHHHHHHS-CCCSEEEEEEEHHHHHHHT-CTT-----SHHH
T ss_pred ChHHhCCccc-----------CCCe-EEEEeCCcccCHHHHHHHHhc-CCCCeEEEEEEHHHHHHHh-cCC-----cchh
Confidence 9999987642 1234 799999999999999999875 3467888999999999998 444 7899
Q ss_pred hhhhhccC
Q 023482 274 IFVNFYSG 281 (281)
Q Consensus 274 ~l~~~~~~ 281 (281)
++++++|+
T Consensus 144 v~~~~~~~ 151 (244)
T 1qam_A 144 LFLMAEVD 151 (244)
T ss_dssp HHHTTTEE
T ss_pred HHhhhhEe
Confidence 99998863
No 11
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.79 E-value=2.3e-20 Score=161.90 Aligned_cols=148 Identities=24% Similarity=0.440 Sum_probs=125.9
Q ss_pred CCCcccCccccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEE
Q 023482 114 FPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQ 193 (281)
Q Consensus 114 ~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~ 193 (281)
.+++.+||+|..++.+.+.+++.+.+.++.+|||||||+|.++..+++.+.+|+|+|+|+.+++.|+++....+++++++
T Consensus 2 ~~~k~~gq~fl~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~~~~~v~~~~ 81 (245)
T 1yub_A 2 NKNIKYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKLNTRVTLIH 81 (245)
T ss_dssp CCCCCSCCCBCCCTTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTTTCSEEEECC
T ss_pred CCCcccCCCCCCCHHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhccCCceEEEE
Confidence 46788999999999999999999998888999999999999999999998999999999999999988776445899999
Q ss_pred cCccccccccchhhHHHhhcCCCCccEEEEcCCCcccHHHHHHhccCCCCcceEEEeehhhHHHHhcCCCCCCCccchhh
Q 023482 194 EDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFSEVVLLLQEETALRLVEPSLRTSEYRPIN 273 (281)
Q Consensus 194 gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~~~~~~~~~~~~a~rl~~~~pg~~~y~~~s 273 (281)
+|+.++++.+ .+.| .|++|+||+...+++.+++.. .......+|+|++.+.|+. .|| |.++
T Consensus 82 ~D~~~~~~~~-----------~~~f-~vv~n~Py~~~~~~~~~~~~~-~~~~~~~lm~q~e~a~rll--~~~----G~l~ 142 (245)
T 1yub_A 82 QDILQFQFPN-----------KQRY-KIVGNIPYHLSTQIIKKVVFE-SRASDIYLIVEEGFYKRTL--DIH----RTLG 142 (245)
T ss_dssp SCCTTTTCCC-----------SSEE-EEEEECCSSSCHHHHHHHHHH-CCCEEEEEEEESSHHHHHH--CGG----GSHH
T ss_pred CChhhcCccc-----------CCCc-EEEEeCCccccHHHHHHHHhC-CCCCeEEEEeeHHHHHHHh--CCC----Cchh
Confidence 9999987531 2457 899999999999988888754 3456788899999999998 333 6788
Q ss_pred hhhhhcc
Q 023482 274 IFVNFYS 280 (281)
Q Consensus 274 ~l~~~~~ 280 (281)
+..+.++
T Consensus 143 v~~~~~~ 149 (245)
T 1yub_A 143 LLLHTQV 149 (245)
T ss_dssp HHTTTTB
T ss_pred hhheehe
Confidence 7777665
No 12
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.59 E-value=6.6e-15 Score=125.49 Aligned_cols=110 Identities=17% Similarity=0.190 Sum_probs=94.5
Q ss_pred ccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccc
Q 023482 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIR 202 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~ 202 (281)
....+.+...+++.+...++.+|||+|||+|.++..++..+.+|+|+|+++.+++.|+++....++++++++|+.+...
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~- 130 (231)
T 1vbf_A 52 NTTALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE- 130 (231)
T ss_dssp EECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG-
T ss_pred ccCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccc-
Confidence 4678889999999999888999999999999999999998899999999999999999998866689999999987321
Q ss_pred cchhhHHHhhcCCCCccEEEEcCCCcccHHHHHHhccCCCCc
Q 023482 203 SHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIF 244 (281)
Q Consensus 203 d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~ 244 (281)
..+.||+|+++.+++...+.+.++++++|.+
T Consensus 131 -----------~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~l 161 (231)
T 1vbf_A 131 -----------EEKPYDRVVVWATAPTLLCKPYEQLKEGGIM 161 (231)
T ss_dssp -----------GGCCEEEEEESSBBSSCCHHHHHTEEEEEEE
T ss_pred -----------cCCCccEEEECCcHHHHHHHHHHHcCCCcEE
Confidence 1267999999987766666777888888765
No 13
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.56 E-value=4.6e-14 Score=118.20 Aligned_cols=102 Identities=29% Similarity=0.405 Sum_probs=86.3
Q ss_pred CCCcccCccccCCHHHHHHHHHHhc---CCCCCEEEEEcCCccHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCC-C
Q 023482 114 FPRKSLGQHYMLNSEINDQLAAAAA---VQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASID-Q 188 (281)
Q Consensus 114 ~~~~~~g~~~~~~~~~~~~l~~~l~---~~~~~~VLDiGcG~G~~t~~la~~~~-~v~gvD~s~~~l~~a~~~~~~~~-~ 188 (281)
.....+++ |.+++.+...++..+. ..++.+|||+|||+|.++..++..+. +|+|+|+++.+++.|+++....+ +
T Consensus 20 ~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~ 98 (207)
T 1wy7_A 20 NPKVWLEQ-YRTPGNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGK 98 (207)
T ss_dssp SCCGGGTC-CCCCHHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTS
T ss_pred Ccccceee-ecCchHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCC
Confidence 45567777 8888888888876654 45678999999999999999999864 89999999999999999987666 8
Q ss_pred eEEEEcCccccccccchhhHHHhhcCCCCccEEEEcCCCcccH
Q 023482 189 LKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNIST 231 (281)
Q Consensus 189 v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~ 231 (281)
++++++|+.+++ ..||+|++||||+...
T Consensus 99 ~~~~~~d~~~~~---------------~~~D~v~~~~p~~~~~ 126 (207)
T 1wy7_A 99 FKVFIGDVSEFN---------------SRVDIVIMNPPFGSQR 126 (207)
T ss_dssp EEEEESCGGGCC---------------CCCSEEEECCCCSSSS
T ss_pred EEEEECchHHcC---------------CCCCEEEEcCCCcccc
Confidence 999999998864 4799999999997653
No 14
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.56 E-value=1.7e-14 Score=119.53 Aligned_cols=112 Identities=19% Similarity=0.302 Sum_probs=84.3
Q ss_pred ccCCHHHHHHHHHHhcC---CCCCEEEEEcCCccHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCC--CCeEEEEcCc
Q 023482 123 YMLNSEINDQLAAAAAV---QEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASI--DQLKVLQEDF 196 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l~~---~~~~~VLDiGcG~G~~t~~la~~~~-~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~gD~ 196 (281)
..+...+.+.+++.+.. .++.+|||+|||+|.++..++..+. +|+|+|+|+.+++.|+++.... ++++++++|+
T Consensus 23 rp~~~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~ 102 (189)
T 3p9n_A 23 RPTTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAV 102 (189)
T ss_dssp ---CHHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCH
T ss_pred ccCcHHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccH
Confidence 34556666677666643 4778999999999999998888754 8999999999999999998654 3899999999
Q ss_pred cccccccchhhHHHhhcCCCCccEEEEcCCCcccH----HHHH---H--hccCCCCc
Q 023482 197 VKCHIRSHMLSLFERRKSSSGFAKVVANIPFNIST----DVIK---Q--LLPMGDIF 244 (281)
Q Consensus 197 ~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~----~~~~---~--ll~~~~~~ 244 (281)
.+++.. ...+.||+|++|+||+... ..+. + ++++++.+
T Consensus 103 ~~~~~~----------~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l 149 (189)
T 3p9n_A 103 AAVVAA----------GTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVA 149 (189)
T ss_dssp HHHHHH----------CCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEE
T ss_pred HHHHhh----------ccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEE
Confidence 886421 1247899999999998742 2332 4 66777654
No 15
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.55 E-value=2.4e-14 Score=120.21 Aligned_cols=110 Identities=16% Similarity=0.201 Sum_probs=94.2
Q ss_pred ccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEcCccccc
Q 023482 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCH 200 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~gD~~~~~ 200 (281)
+...+.+...+++.+...++.+|||+|||+|.++..+++.+.+|+++|+++.+++.|++++... .+++++++|+.+..
T Consensus 59 ~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 138 (210)
T 3lbf_A 59 TISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGW 138 (210)
T ss_dssp EECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC
T ss_pred EeCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCC
Confidence 5668899999999999999999999999999999999999889999999999999999998754 38999999998865
Q ss_pred cccchhhHHHhhcCCCCccEEEEcCCCcccHHHHHHhccCCCCc
Q 023482 201 IRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIF 244 (281)
Q Consensus 201 ~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~ 244 (281)
.. .+.||+|+++..++...+.+.++++++|.+
T Consensus 139 ~~------------~~~~D~i~~~~~~~~~~~~~~~~L~pgG~l 170 (210)
T 3lbf_A 139 QA------------RAPFDAIIVTAAPPEIPTALMTQLDEGGIL 170 (210)
T ss_dssp GG------------GCCEEEEEESSBCSSCCTHHHHTEEEEEEE
T ss_pred cc------------CCCccEEEEccchhhhhHHHHHhcccCcEE
Confidence 32 368999999866655556677788888765
No 16
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.53 E-value=1.9e-13 Score=115.04 Aligned_cols=113 Identities=17% Similarity=0.170 Sum_probs=91.8
Q ss_pred cccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC--C-CeEEEEcCccc
Q 023482 122 HYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI--D-QLKVLQEDFVK 198 (281)
Q Consensus 122 ~~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~--~-~v~~~~gD~~~ 198 (281)
..++.+.+...++..+.+.++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.|+++.... . +++++++|+.+
T Consensus 36 ~~~~~~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 115 (204)
T 3njr_A 36 GQITKSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPA 115 (204)
T ss_dssp SCCCCHHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTG
T ss_pred CCCCcHHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhh
Confidence 46778888889999999999999999999999999999999889999999999999999988654 3 79999999988
Q ss_pred cccccchhhHHHhhcCCCCccEEEEcCCCcc-cHHHHHHhccCCCCcce
Q 023482 199 CHIRSHMLSLFERRKSSSGFAKVVANIPFNI-STDVIKQLLPMGDIFSE 246 (281)
Q Consensus 199 ~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~-~~~~~~~ll~~~~~~~~ 246 (281)
.. .....||+|+++..... .-..+.++++++|.+..
T Consensus 116 ~~------------~~~~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~ 152 (204)
T 3njr_A 116 AL------------ADLPLPEAVFIGGGGSQALYDRLWEWLAPGTRIVA 152 (204)
T ss_dssp GG------------TTSCCCSEEEECSCCCHHHHHHHHHHSCTTCEEEE
T ss_pred hc------------ccCCCCCEEEECCcccHHHHHHHHHhcCCCcEEEE
Confidence 32 12257999999875432 23444577888887643
No 17
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.53 E-value=3.4e-14 Score=119.36 Aligned_cols=105 Identities=16% Similarity=0.056 Sum_probs=81.9
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC--------------CCCeEEEEc
Q 023482 129 INDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFAS--------------IDQLKVLQE 194 (281)
Q Consensus 129 ~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~--------------~~~v~~~~g 194 (281)
....++..+.+.++.+|||+|||+|..+..|++.|.+|+|||+|+.|++.|+++... ..+++++++
T Consensus 10 ~l~~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 89 (203)
T 1pjz_A 10 DLQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCG 89 (203)
T ss_dssp HHHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEE
T ss_pred HHHHHHHhcccCCCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEEC
Confidence 344445666777888999999999999999999999999999999999999988653 358999999
Q ss_pred CccccccccchhhHHHhhcCCCCccEEEEcCCCcccH--------HHHHHhccCCCCc
Q 023482 195 DFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNIST--------DVIKQLLPMGDIF 244 (281)
Q Consensus 195 D~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~--------~~~~~ll~~~~~~ 244 (281)
|+.++++.+ .+.||+|+++..++... ..+.+++++||.+
T Consensus 90 d~~~l~~~~-----------~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~ 136 (203)
T 1pjz_A 90 DFFALTARD-----------IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSG 136 (203)
T ss_dssp CCSSSTHHH-----------HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEE
T ss_pred ccccCCccc-----------CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEE
Confidence 999987532 14689999865553321 2345888888863
No 18
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.52 E-value=6.5e-14 Score=119.23 Aligned_cols=94 Identities=16% Similarity=0.248 Sum_probs=74.7
Q ss_pred CCHHHHHHHHHHhcCCCCCEEEEEcCC-ccHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCCC-CeEEEEcCcccccc
Q 023482 125 LNSEINDQLAAAAAVQEGDIVLEIGPG-TGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHI 201 (281)
Q Consensus 125 ~~~~~~~~l~~~l~~~~~~~VLDiGcG-~G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~~~~~~-~v~~~~gD~~~~~~ 201 (281)
.++...+.+.....+.++.+|||+||| +|.++..++.. +.+|+|+|+++.+++.|+++...++ +++++++|+..+..
T Consensus 39 ~p~~~~~~l~~~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~ 118 (230)
T 3evz_A 39 VTTPISRYIFLKTFLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKG 118 (230)
T ss_dssp CCCHHHHHHHHHTTCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTT
T ss_pred eCCCchhhhHhHhhcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhh
Confidence 344444555344445678899999999 99999999998 8899999999999999999987665 89999999754321
Q ss_pred ccchhhHHHhhcCCCCccEEEEcCCCcc
Q 023482 202 RSHMLSLFERRKSSSGFAKVVANIPFNI 229 (281)
Q Consensus 202 ~d~~~d~v~~~~~~~~~d~Vi~n~P~~~ 229 (281)
...+.||+|++||||..
T Consensus 119 -----------~~~~~fD~I~~npp~~~ 135 (230)
T 3evz_A 119 -----------VVEGTFDVIFSAPPYYD 135 (230)
T ss_dssp -----------TCCSCEEEEEECCCCC-
T ss_pred -----------cccCceeEEEECCCCcC
Confidence 22378999999999965
No 19
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.51 E-value=2.9e-13 Score=113.23 Aligned_cols=112 Identities=13% Similarity=0.202 Sum_probs=91.9
Q ss_pred cCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEcCcccc
Q 023482 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG--ATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKC 199 (281)
Q Consensus 124 ~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~--~~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~gD~~~~ 199 (281)
++.+++...++..+.+.++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|+++.... ++++++++|+.+.
T Consensus 23 ~~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 102 (204)
T 3e05_A 23 ITKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEG 102 (204)
T ss_dssp SCCHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTT
T ss_pred CChHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhh
Confidence 3788888999999999999999999999999999999986 79999999999999999987644 4899999999765
Q ss_pred ccccchhhHHHhhcCCCCccEEEEcCCCcccHHHH---HHhccCCCCcceE
Q 023482 200 HIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVI---KQLLPMGDIFSEV 247 (281)
Q Consensus 200 ~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~---~~ll~~~~~~~~~ 247 (281)
.. ..+.||+|+++.++.....++ .++++++|.+...
T Consensus 103 ~~------------~~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 141 (204)
T 3e05_A 103 LD------------DLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLN 141 (204)
T ss_dssp CT------------TSCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEE
T ss_pred hh------------cCCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEE
Confidence 32 226799999998766444444 4778888876443
No 20
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.48 E-value=1.9e-13 Score=119.58 Aligned_cols=94 Identities=23% Similarity=0.313 Sum_probs=75.8
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHc----CCEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCccccccccchhhHHHh
Q 023482 139 VQEGDIVLEIGPGTGSLTNVLLNA----GATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSHMLSLFER 211 (281)
Q Consensus 139 ~~~~~~VLDiGcG~G~~t~~la~~----~~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~~~~~d~~~d~v~~ 211 (281)
++++.+|||+|||+|..+..+++. +++|+|||+|+.|++.|++++...+ +++++++|+.++++
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~---------- 137 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI---------- 137 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC----------
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc----------
Confidence 457889999999999999999985 5699999999999999999987543 89999999999875
Q ss_pred hcCCCCccEEEEcCCCcccH--------HHHHHhccCCCCcce
Q 023482 212 RKSSSGFAKVVANIPFNIST--------DVIKQLLPMGDIFSE 246 (281)
Q Consensus 212 ~~~~~~~d~Vi~n~P~~~~~--------~~~~~ll~~~~~~~~ 246 (281)
+.+|+|+++.-++... ..+.++|++||.+..
T Consensus 138 ----~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii 176 (261)
T 4gek_A 138 ----ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVL 176 (261)
T ss_dssp ----CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ----cccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEE
Confidence 4589999986654321 223477888887643
No 21
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.48 E-value=2.8e-13 Score=112.99 Aligned_cols=95 Identities=19% Similarity=0.262 Sum_probs=75.4
Q ss_pred ccCccccCCHHHHHHHHHHhc---CCCCCEEEEEcCCccHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEE
Q 023482 118 SLGQHYMLNSEINDQLAAAAA---VQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASIDQLKVLQ 193 (281)
Q Consensus 118 ~~g~~~~~~~~~~~~l~~~l~---~~~~~~VLDiGcG~G~~t~~la~~~~-~v~gvD~s~~~l~~a~~~~~~~~~v~~~~ 193 (281)
.+++ +.++..+...++..+. ..++.+|||+|||+|.++..++..+. +|+|+|+++.+++.|+++.. ++++++
T Consensus 26 ~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~---~~~~~~ 101 (200)
T 1ne2_A 26 YLEQ-YPTDASTAAYFLIEIYNDGNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG---GVNFMV 101 (200)
T ss_dssp -----CCCCHHHHHHHHHHHHHHTSSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT---TSEEEE
T ss_pred ceee-cCCCHHHHHHHHHHHHhcCCCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC---CCEEEE
Confidence 3444 7777877777776653 45678999999999999999998865 79999999999999999876 799999
Q ss_pred cCccccccccchhhHHHhhcCCCCccEEEEcCCCcccH
Q 023482 194 EDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNIST 231 (281)
Q Consensus 194 gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~ 231 (281)
+|+.+++ +.||+|++|+||++..
T Consensus 102 ~d~~~~~---------------~~~D~v~~~~p~~~~~ 124 (200)
T 1ne2_A 102 ADVSEIS---------------GKYDTWIMNPPFGSVV 124 (200)
T ss_dssp CCGGGCC---------------CCEEEEEECCCC----
T ss_pred CcHHHCC---------------CCeeEEEECCCchhcc
Confidence 9998864 5799999999997654
No 22
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.48 E-value=2.5e-13 Score=111.72 Aligned_cols=99 Identities=15% Similarity=0.265 Sum_probs=76.2
Q ss_pred cCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEcCccccccccchhhHHHhhcCC
Q 023482 138 AVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 138 ~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
.+.++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|+++.... ++++++++|+.+++. ...
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~-----------~~~ 87 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDH-----------YVR 87 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGG-----------TCC
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHh-----------hcc
Confidence 3457889999999999999999999889999999999999999988644 489999988877542 123
Q ss_pred CCccEEEEcCCCccc--------H-------HHHHHhccCCCCcceE
Q 023482 216 SGFAKVVANIPFNIS--------T-------DVIKQLLPMGDIFSEV 247 (281)
Q Consensus 216 ~~~d~Vi~n~P~~~~--------~-------~~~~~ll~~~~~~~~~ 247 (281)
+.||+|++|++|... . ..+.+++++||.+...
T Consensus 88 ~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 134 (185)
T 3mti_A 88 EPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIM 134 (185)
T ss_dssp SCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEE
Confidence 679999999766332 1 3344778888876443
No 23
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.47 E-value=4.7e-13 Score=112.68 Aligned_cols=110 Identities=15% Similarity=0.174 Sum_probs=91.4
Q ss_pred ccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEcCcc
Q 023482 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG---ATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFV 197 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~---~~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~gD~~ 197 (281)
....+.+...+++.+...++.+|||||||+|.++..+++.. .+|+++|+++.+++.|+++.... .+++++++|+.
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~ 138 (215)
T 2yxe_A 59 TISAIHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGT 138 (215)
T ss_dssp EECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGG
T ss_pred EeCcHHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcc
Confidence 45668889999999988889999999999999999999874 79999999999999999987643 47999999985
Q ss_pred ccccccchhhHHHhhcCCCCccEEEEcCCCcccHHHHHHhccCCCCc
Q 023482 198 KCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIF 244 (281)
Q Consensus 198 ~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~ 244 (281)
... ...+.||+|+++.+++.....+.++++++|.+
T Consensus 139 ~~~------------~~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~l 173 (215)
T 2yxe_A 139 LGY------------EPLAPYDRIYTTAAGPKIPEPLIRQLKDGGKL 173 (215)
T ss_dssp GCC------------GGGCCEEEEEESSBBSSCCHHHHHTEEEEEEE
T ss_pred cCC------------CCCCCeeEEEECCchHHHHHHHHHHcCCCcEE
Confidence 432 11367999999988777667778888887765
No 24
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.47 E-value=8.9e-14 Score=116.73 Aligned_cols=108 Identities=18% Similarity=0.200 Sum_probs=80.6
Q ss_pred CCHHHHHHHHHHhcCC-CCCEEEEEcCCccHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCC--CeEEEEcCcccc-
Q 023482 125 LNSEINDQLAAAAAVQ-EGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASID--QLKVLQEDFVKC- 199 (281)
Q Consensus 125 ~~~~~~~~l~~~l~~~-~~~~VLDiGcG~G~~t~~la~~~~-~v~gvD~s~~~l~~a~~~~~~~~--~v~~~~gD~~~~- 199 (281)
+...+.+.+++.+... ++.+|||+|||+|.++..++..+. +|+|+|+|+.+++.|+++....+ +++++++|+.+.
T Consensus 37 ~~~~~~~~l~~~l~~~~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~ 116 (202)
T 2fpo_A 37 TTDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFL 116 (202)
T ss_dssp -CHHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHH
T ss_pred CHHHHHHHHHHHHHhhcCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHH
Confidence 3445566666665542 678999999999999999888764 99999999999999999987554 899999999873
Q ss_pred ccccchhhHHHhhcCCCCccEEEEcCCCccc--HHHHHHh-----ccCCCCc
Q 023482 200 HIRSHMLSLFERRKSSSGFAKVVANIPFNIS--TDVIKQL-----LPMGDIF 244 (281)
Q Consensus 200 ~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~--~~~~~~l-----l~~~~~~ 244 (281)
+. ..+.||+|++++||+.. ..++..+ +++++.+
T Consensus 117 ~~------------~~~~fD~V~~~~p~~~~~~~~~l~~l~~~~~L~pgG~l 156 (202)
T 2fpo_A 117 AQ------------KGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALI 156 (202)
T ss_dssp SS------------CCCCEEEEEECCSSSTTTHHHHHHHHHHTTCEEEEEEE
T ss_pred hh------------cCCCCCEEEECCCCCCCcHHHHHHHHHhcCccCCCcEE
Confidence 32 23679999999997632 2344433 5555544
No 25
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.47 E-value=4.2e-13 Score=114.91 Aligned_cols=112 Identities=13% Similarity=0.230 Sum_probs=87.9
Q ss_pred ccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHH--cCCEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCcc
Q 023482 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLN--AGATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFV 197 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~--~~~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~ 197 (281)
....+.....+...+...++.+|||||||+|+++..++. .+.+|+++|+++.+++.|++++...+ +++++++|+.
T Consensus 53 ~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 132 (232)
T 3ntv_A 53 PIVDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNAL 132 (232)
T ss_dssp CCCCHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGG
T ss_pred CCcCHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHH
Confidence 445677777777777777888999999999999999998 46799999999999999999987553 8999999998
Q ss_pred ccccccchhhHHHhhcCCCCccEEEEcCCCcccHHHHH---HhccCCCCc
Q 023482 198 KCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIK---QLLPMGDIF 244 (281)
Q Consensus 198 ~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~~---~ll~~~~~~ 244 (281)
+..... . .+.||+|+.+.+......++. ++++++|.+
T Consensus 133 ~~~~~~---------~-~~~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~l 172 (232)
T 3ntv_A 133 EQFENV---------N-DKVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLV 172 (232)
T ss_dssp GCHHHH---------T-TSCEEEEEEETTSSSHHHHHHHHGGGEEEEEEE
T ss_pred HHHHhh---------c-cCCccEEEEcCcHHHHHHHHHHHHHhcCCCeEE
Confidence 752100 1 368999999987766555544 566776654
No 26
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.47 E-value=3.8e-13 Score=117.02 Aligned_cols=112 Identities=13% Similarity=0.034 Sum_probs=83.7
Q ss_pred CCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc-------------------C
Q 023482 125 LNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFA-------------------S 185 (281)
Q Consensus 125 ~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~-------------------~ 185 (281)
..+.+.+.+...+...++.+|||+|||+|..+..|++.|.+|+|||+|+.|++.|+++.. .
T Consensus 52 ~~~~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (252)
T 2gb4_A 52 GHQLLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSS 131 (252)
T ss_dssp CCHHHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEET
T ss_pred CCHHHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccC
Confidence 345555555544444577899999999999999999999999999999999999987663 1
Q ss_pred CCCeEEEEcCccccccccchhhHHHhhcCCCCccEEEEcCCCccc--------HHHHHHhccCCCCcceE
Q 023482 186 IDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNIS--------TDVIKQLLPMGDIFSEV 247 (281)
Q Consensus 186 ~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~--------~~~~~~ll~~~~~~~~~ 247 (281)
..+++++++|+.++++. ..+.||+|+++..+... -..+.+++++||.+-..
T Consensus 132 ~~~i~~~~~D~~~l~~~-----------~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 132 SGSISLYCCSIFDLPRA-----------NIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp TSSEEEEESCTTTGGGG-----------CCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCceEEEECccccCCcc-----------cCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 24899999999998753 12679999986544221 12345788888876433
No 27
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.47 E-value=1.7e-13 Score=119.35 Aligned_cols=89 Identities=15% Similarity=0.246 Sum_probs=72.0
Q ss_pred HHHHHhcCC-CCCEEEEEcCCccHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCccccccccchh
Q 023482 132 QLAAAAAVQ-EGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSHML 206 (281)
Q Consensus 132 ~l~~~l~~~-~~~~VLDiGcG~G~~t~~la~~~~-~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~~~~~d~~~ 206 (281)
.+...+... ++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.|++++..++ +++++++|+.+++..
T Consensus 39 ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~---- 114 (259)
T 3lpm_A 39 LLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDL---- 114 (259)
T ss_dssp HHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGT----
T ss_pred HHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhh----
Confidence 344555666 788999999999999999999854 99999999999999999987553 799999999987521
Q ss_pred hHHHhhcCCCCccEEEEcCCCccc
Q 023482 207 SLFERRKSSSGFAKVVANIPFNIS 230 (281)
Q Consensus 207 d~v~~~~~~~~~d~Vi~n~P~~~~ 230 (281)
...+.||+|++||||...
T Consensus 115 ------~~~~~fD~Ii~npPy~~~ 132 (259)
T 3lpm_A 115 ------IPKERADIVTCNPPYFAT 132 (259)
T ss_dssp ------SCTTCEEEEEECCCC---
T ss_pred ------hccCCccEEEECCCCCCC
Confidence 124789999999999544
No 28
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.47 E-value=6.9e-13 Score=108.07 Aligned_cols=108 Identities=15% Similarity=0.200 Sum_probs=88.1
Q ss_pred ccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEcCccccc
Q 023482 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCH 200 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~gD~~~~~ 200 (281)
....+.+...+++.+...++.+|||+|||+|.++..+++.+.+++|+|+++.+++.|+++.... ++++++++|+.+ +
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~ 95 (183)
T 2yxd_A 17 PITKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-V 95 (183)
T ss_dssp CCCCHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-H
T ss_pred CcCHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-c
Confidence 5677888999999998888899999999999999999997779999999999999999998755 389999999987 4
Q ss_pred cccchhhHHHhhcCCCCccEEEEcCCCcccHHHHHHhcc-CCCCc
Q 023482 201 IRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLP-MGDIF 244 (281)
Q Consensus 201 ~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~~~ll~-~~~~~ 244 (281)
++ .+.||+|+++.+ .....++..+.. ++|.+
T Consensus 96 ~~------------~~~~D~i~~~~~-~~~~~~l~~~~~~~gG~l 127 (183)
T 2yxd_A 96 LD------------KLEFNKAFIGGT-KNIEKIIEILDKKKINHI 127 (183)
T ss_dssp GG------------GCCCSEEEECSC-SCHHHHHHHHHHTTCCEE
T ss_pred cc------------CCCCcEEEECCc-ccHHHHHHHHhhCCCCEE
Confidence 32 267999999988 555555554433 45544
No 29
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.46 E-value=1.2e-13 Score=112.82 Aligned_cols=84 Identities=24% Similarity=0.251 Sum_probs=68.0
Q ss_pred CCHHHHHHHHHHhcC--CCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccc
Q 023482 125 LNSEINDQLAAAAAV--QEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIR 202 (281)
Q Consensus 125 ~~~~~~~~l~~~l~~--~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~ 202 (281)
+++.....+++.+.. .++.+|||+|||+|.++..+++.+ +|+|+|+|+.|++. ..+++++++|+.+ ++.
T Consensus 5 ~P~~~~~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s~~~~~~-------~~~~~~~~~d~~~-~~~ 75 (170)
T 3q87_B 5 EPGEDTYTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN-TVVSTDLNIRALES-------HRGGNLVRADLLC-SIN 75 (170)
T ss_dssp CCCHHHHHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS-EEEEEESCHHHHHT-------CSSSCEEECSTTT-TBC
T ss_pred CcCccHHHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC-cEEEEECCHHHHhc-------ccCCeEEECChhh-hcc
Confidence 344445555555544 567799999999999999999999 99999999999987 3488999999987 432
Q ss_pred cchhhHHHhhcCCCCccEEEEcCCCcc
Q 023482 203 SHMLSLFERRKSSSGFAKVVANIPFNI 229 (281)
Q Consensus 203 d~~~d~v~~~~~~~~~d~Vi~n~P~~~ 229 (281)
.+.||+|++|+||.+
T Consensus 76 ------------~~~fD~i~~n~~~~~ 90 (170)
T 3q87_B 76 ------------QESVDVVVFNPPYVP 90 (170)
T ss_dssp ------------GGGCSEEEECCCCBT
T ss_pred ------------cCCCCEEEECCCCcc
Confidence 267999999999984
No 30
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.46 E-value=7e-14 Score=119.96 Aligned_cols=106 Identities=18% Similarity=0.226 Sum_probs=83.1
Q ss_pred CCHHHHHHHHHHhc-CCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCccccc
Q 023482 125 LNSEINDQLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCH 200 (281)
Q Consensus 125 ~~~~~~~~l~~~l~-~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~~~ 200 (281)
.+..+...+...+. ..++.+|||+|||+|.++..++..+.+|+|+|+++.+++.|++++...+ +++++++|+.+++
T Consensus 61 ~~~~~~~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 140 (241)
T 3gdh_A 61 TPEKIAEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA 140 (241)
T ss_dssp CCHHHHHHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG
T ss_pred CHHHHHHHHHHHhhhccCCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc
Confidence 34445566555543 2367899999999999999999999999999999999999999987554 8999999998875
Q ss_pred cccchhhHHHhhcCCCCccEEEEcCCCcccHHH------HHHhccCCCC
Q 023482 201 IRSHMLSLFERRKSSSGFAKVVANIPFNISTDV------IKQLLPMGDI 243 (281)
Q Consensus 201 ~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~------~~~ll~~~~~ 243 (281)
. ...||+|++|+||+..... +.++++++|.
T Consensus 141 ~-------------~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~ 176 (241)
T 3gdh_A 141 S-------------FLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGF 176 (241)
T ss_dssp G-------------GCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHH
T ss_pred c-------------cCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcce
Confidence 2 2689999999999865532 2355566654
No 31
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.46 E-value=1.7e-13 Score=119.53 Aligned_cols=104 Identities=13% Similarity=0.122 Sum_probs=83.9
Q ss_pred CHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccch
Q 023482 126 NSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHM 205 (281)
Q Consensus 126 ~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~ 205 (281)
++++.+.+.+... .+.+|||||||+|.++..|++.+.+|+|+|+|+.|++.|++ ..+++++++|++++++++
T Consensus 26 p~~l~~~l~~~~~--~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~----~~~v~~~~~~~e~~~~~~-- 97 (257)
T 4hg2_A 26 PRALFRWLGEVAP--ARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALR----HPRVTYAVAPAEDTGLPP-- 97 (257)
T ss_dssp CHHHHHHHHHHSS--CSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCC----CTTEEEEECCTTCCCCCS--
T ss_pred HHHHHHHHHHhcC--CCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhh----cCCceeehhhhhhhcccC--
Confidence 5677777777654 45689999999999999999999999999999999987753 358999999999998754
Q ss_pred hhHHHhhcCCCCccEEEEcCCCcccH-----HHHHHhccCCCCcceE
Q 023482 206 LSLFERRKSSSGFAKVVANIPFNIST-----DVIKQLLPMGDIFSEV 247 (281)
Q Consensus 206 ~d~v~~~~~~~~~d~Vi~n~P~~~~~-----~~~~~ll~~~~~~~~~ 247 (281)
++||+|+++..+++.. ..+.++|++||.+...
T Consensus 98 ----------~sfD~v~~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~ 134 (257)
T 4hg2_A 98 ----------ASVDVAIAAQAMHWFDLDRFWAELRRVARPGAVFAAV 134 (257)
T ss_dssp ----------SCEEEEEECSCCTTCCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----------CcccEEEEeeehhHhhHHHHHHHHHHHcCCCCEEEEE
Confidence 6789999876665543 3456889999987443
No 32
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.46 E-value=1e-13 Score=116.30 Aligned_cols=107 Identities=18% Similarity=0.247 Sum_probs=79.3
Q ss_pred HHHHHHHHHhcCC-CCCEEEEEcCCccHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhcCC----CCeEEEEcCcccccc
Q 023482 128 EINDQLAAAAAVQ-EGDIVLEIGPGTGSLTNVLLNAG-ATVLAIEKDQHMVGLVRERFASI----DQLKVLQEDFVKCHI 201 (281)
Q Consensus 128 ~~~~~l~~~l~~~-~~~~VLDiGcG~G~~t~~la~~~-~~v~gvD~s~~~l~~a~~~~~~~----~~v~~~~gD~~~~~~ 201 (281)
.+.+.+++.+... ++.+|||+|||+|.++..++..+ .+|+|+|+|+.+++.|+++.... ++++++++|+.++..
T Consensus 39 ~~~~~l~~~l~~~~~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~ 118 (201)
T 2ift_A 39 RVKETLFNWLMPYIHQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLK 118 (201)
T ss_dssp HHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTT
T ss_pred HHHHHHHHHHHHhcCCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHH
Confidence 4455555555432 67899999999999999888776 49999999999999999988643 389999999987532
Q ss_pred ccchhhHHHhhcCCCC-ccEEEEcCCCcccH--HHHHHh-----ccCCCCc
Q 023482 202 RSHMLSLFERRKSSSG-FAKVVANIPFNIST--DVIKQL-----LPMGDIF 244 (281)
Q Consensus 202 ~d~~~d~v~~~~~~~~-~d~Vi~n~P~~~~~--~~~~~l-----l~~~~~~ 244 (281)
. ...+. ||+|++|+||.... .++..+ ++++|.+
T Consensus 119 ~----------~~~~~~fD~I~~~~~~~~~~~~~~l~~~~~~~~LkpgG~l 159 (201)
T 2ift_A 119 Q----------PQNQPHFDVVFLDPPFHFNLAEQAISLLCENNWLKPNALI 159 (201)
T ss_dssp S----------CCSSCCEEEEEECCCSSSCHHHHHHHHHHHTTCEEEEEEE
T ss_pred h----------hccCCCCCEEEECCCCCCccHHHHHHHHHhcCccCCCcEE
Confidence 1 12367 99999999976432 344444 6666654
No 33
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.46 E-value=5.3e-13 Score=121.45 Aligned_cols=95 Identities=21% Similarity=0.220 Sum_probs=83.0
Q ss_pred ccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHhcCCC--CeEEEEcCcc
Q 023482 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG---ATVLAIEKDQHMVGLVRERFASID--QLKVLQEDFV 197 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~---~~v~gvD~s~~~l~~a~~~~~~~~--~v~~~~gD~~ 197 (281)
....+.++..++..+...++.+|||+|||+|.+++.++..+ .+|+|+|+|+.+++.|+++....+ +++++++|+.
T Consensus 185 a~l~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~ 264 (354)
T 3tma_A 185 GSLTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADAR 264 (354)
T ss_dssp CSCCHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGG
T ss_pred CCcCHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChh
Confidence 44567788888998888888999999999999999999864 799999999999999999988665 8999999999
Q ss_pred ccccccchhhHHHhhcCCCCccEEEEcCCCcc
Q 023482 198 KCHIRSHMLSLFERRKSSSGFAKVVANIPFNI 229 (281)
Q Consensus 198 ~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~ 229 (281)
+++.. ...||+|++||||..
T Consensus 265 ~~~~~------------~~~~D~Ii~npPyg~ 284 (354)
T 3tma_A 265 HLPRF------------FPEVDRILANPPHGL 284 (354)
T ss_dssp GGGGT------------CCCCSEEEECCCSCC
T ss_pred hCccc------------cCCCCEEEECCCCcC
Confidence 98743 256899999999965
No 34
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.45 E-value=6e-13 Score=113.06 Aligned_cols=115 Identities=14% Similarity=0.240 Sum_probs=91.2
Q ss_pred ccCCHHHHHHHHHHh--cCCCCCEEEEEcCCccHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHhcCC-------
Q 023482 123 YMLNSEINDQLAAAA--AVQEGDIVLEIGPGTGSLTNVLLNAG-------ATVLAIEKDQHMVGLVRERFASI------- 186 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l--~~~~~~~VLDiGcG~G~~t~~la~~~-------~~v~gvD~s~~~l~~a~~~~~~~------- 186 (281)
.+..+.+...+++.+ .+.++.+|||||||+|+++..+++.. .+|+++|+++.+++.|+++....
T Consensus 60 ~~~~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~ 139 (227)
T 2pbf_A 60 TISAPHMHALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKI 139 (227)
T ss_dssp EECCHHHHHHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSS
T ss_pred ccCChHHHHHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCcccccc
Confidence 466788888888888 47788999999999999999999874 39999999999999999987643
Q ss_pred CCeEEEEcCccccccccchhhHHHhhcCCCCccEEEEcCCCcccHHHHHHhccCCCCcc
Q 023482 187 DQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFS 245 (281)
Q Consensus 187 ~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~~ 245 (281)
.+++++++|+.+.... .. ...+.||+|+.+.+++.....+.++++++|.+-
T Consensus 140 ~~v~~~~~d~~~~~~~-~~-------~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv 190 (227)
T 2pbf_A 140 DNFKIIHKNIYQVNEE-EK-------KELGLFDAIHVGASASELPEILVDLLAENGKLI 190 (227)
T ss_dssp TTEEEEECCGGGCCHH-HH-------HHHCCEEEEEECSBBSSCCHHHHHHEEEEEEEE
T ss_pred CCEEEEECChHhcccc-cC-------ccCCCcCEEEECCchHHHHHHHHHhcCCCcEEE
Confidence 4899999999875300 00 012679999999887766677778888888663
No 35
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.45 E-value=2.9e-13 Score=117.40 Aligned_cols=106 Identities=19% Similarity=0.232 Sum_probs=85.3
Q ss_pred HHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEcCccccccccchhh
Q 023482 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLS 207 (281)
Q Consensus 130 ~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~gD~~~~~~~d~~~d 207 (281)
...+++.+...++.+|||||||+|.++..+++.+.+|+|+|+++.+++.|+++.... ++++++++|+.++++++
T Consensus 26 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~---- 101 (260)
T 1vl5_A 26 LAKLMQIAALKGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTD---- 101 (260)
T ss_dssp HHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCT----
T ss_pred HHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCC----
Confidence 456777777778899999999999999999998889999999999999999987644 37999999999988643
Q ss_pred HHHhhcCCCCccEEEEcCCCcccH------HHHHHhccCCCCcceE
Q 023482 208 LFERRKSSSGFAKVVANIPFNIST------DVIKQLLPMGDIFSEV 247 (281)
Q Consensus 208 ~v~~~~~~~~~d~Vi~n~P~~~~~------~~~~~ll~~~~~~~~~ 247 (281)
+.||+|+++..+++.. ..+.++++++|.+...
T Consensus 102 --------~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~ 139 (260)
T 1vl5_A 102 --------ERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLV 139 (260)
T ss_dssp --------TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred --------CCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 6799999986654332 3345788888876544
No 36
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.45 E-value=4.9e-13 Score=125.05 Aligned_cols=104 Identities=19% Similarity=0.208 Sum_probs=84.4
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCC--CeEEEEcCccccccccch
Q 023482 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID--QLKVLQEDFVKCHIRSHM 205 (281)
Q Consensus 128 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~--~v~~~~gD~~~~~~~d~~ 205 (281)
.+.+.+++.+...++.+|||+|||+|.++..++..+.+|+|+|+++.+++.|+++...++ |++++++|+.+..... .
T Consensus 273 ~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~-~ 351 (433)
T 1uwv_A 273 KMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQ-P 351 (433)
T ss_dssp HHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSS-G
T ss_pred HHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhh-h
Confidence 456667777777778899999999999999999998899999999999999999987554 8999999998732100 0
Q ss_pred hhHHHhhcCCCCccEEEEcCCCcccHHHHHHhcc
Q 023482 206 LSLFERRKSSSGFAKVVANIPFNISTDVIKQLLP 239 (281)
Q Consensus 206 ~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~~~ll~ 239 (281)
...+.||+|++||||....+++..+..
T Consensus 352 -------~~~~~fD~Vv~dPPr~g~~~~~~~l~~ 378 (433)
T 1uwv_A 352 -------WAKNGFDKVLLDPARAGAAGVMQQIIK 378 (433)
T ss_dssp -------GGTTCCSEEEECCCTTCCHHHHHHHHH
T ss_pred -------hhcCCCCEEEECCCCccHHHHHHHHHh
Confidence 123579999999999877777777654
No 37
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.44 E-value=5.8e-13 Score=115.22 Aligned_cols=110 Identities=15% Similarity=0.187 Sum_probs=90.6
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccch
Q 023482 127 SEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHM 205 (281)
Q Consensus 127 ~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~ 205 (281)
......+++.+.+.++.+|||||||+|.++..+++. +.+|+|+|+++.+++.|+++.....+++++++|+.+++++
T Consensus 41 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~--- 117 (266)
T 3ujc_A 41 LEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFP--- 117 (266)
T ss_dssp HHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCC---
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCC---
Confidence 456777888888888899999999999999999997 8899999999999999999887657999999999998754
Q ss_pred hhHHHhhcCCCCccEEEEcCCCccc--H------HHHHHhccCCCCcceEE
Q 023482 206 LSLFERRKSSSGFAKVVANIPFNIS--T------DVIKQLLPMGDIFSEVV 248 (281)
Q Consensus 206 ~d~v~~~~~~~~~d~Vi~n~P~~~~--~------~~~~~ll~~~~~~~~~~ 248 (281)
.+.||+|+++..++.. . ..+.++++++|.+....
T Consensus 118 ---------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 118 ---------ENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp ---------TTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---------CCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 3789999998766554 2 33347788888765444
No 38
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.44 E-value=9.5e-13 Score=112.74 Aligned_cols=110 Identities=14% Similarity=0.220 Sum_probs=90.4
Q ss_pred ccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEcCcccc
Q 023482 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG-ATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKC 199 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~-~~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~gD~~~~ 199 (281)
....+.+...+++.+...++.+|||||||+|.++..+++.. .+|+++|+++.+++.|+++.... .+++++.+|+ ..
T Consensus 73 ~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~-~~ 151 (235)
T 1jg1_A 73 TVSAPHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG-SK 151 (235)
T ss_dssp EECCHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG-GG
T ss_pred eeccHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc-cc
Confidence 45678899999999998889999999999999999999985 89999999999999999988654 3799999998 33
Q ss_pred ccccchhhHHHhhcCCCCccEEEEcCCCcccHHHHHHhccCCCCc
Q 023482 200 HIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIF 244 (281)
Q Consensus 200 ~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~ 244 (281)
++. ....||+|+++.+.....+.+.++++++|.+
T Consensus 152 ~~~-----------~~~~fD~Ii~~~~~~~~~~~~~~~L~pgG~l 185 (235)
T 1jg1_A 152 GFP-----------PKAPYDVIIVTAGAPKIPEPLIEQLKIGGKL 185 (235)
T ss_dssp CCG-----------GGCCEEEEEECSBBSSCCHHHHHTEEEEEEE
T ss_pred CCC-----------CCCCccEEEECCcHHHHHHHHHHhcCCCcEE
Confidence 332 1245999999877766656667777777765
No 39
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.44 E-value=5.4e-13 Score=122.42 Aligned_cols=95 Identities=18% Similarity=0.224 Sum_probs=81.5
Q ss_pred ccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCcc
Q 023482 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA--TVLAIEKDQHMVGLVRERFASID---QLKVLQEDFV 197 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~--~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~ 197 (281)
....+.+...++... ..++.+|||+|||+|.+++.++..+. +|+|+|+|+.+++.|+++....+ +++++++|+.
T Consensus 200 a~l~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~ 278 (373)
T 3tm4_A 200 AHLKASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDAT 278 (373)
T ss_dssp TCCCHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGG
T ss_pred CCccHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh
Confidence 345778888888888 77888999999999999999999876 99999999999999999987654 8999999999
Q ss_pred ccccccchhhHHHhhcCCCCccEEEEcCCCccc
Q 023482 198 KCHIRSHMLSLFERRKSSSGFAKVVANIPFNIS 230 (281)
Q Consensus 198 ~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~ 230 (281)
++++. .+.||+|++||||...
T Consensus 279 ~~~~~------------~~~fD~Ii~npPyg~r 299 (373)
T 3tm4_A 279 QLSQY------------VDSVDFAISNLPYGLK 299 (373)
T ss_dssp GGGGT------------CSCEEEEEEECCCC--
T ss_pred hCCcc------------cCCcCEEEECCCCCcc
Confidence 98743 3679999999999753
No 40
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.44 E-value=8e-13 Score=107.55 Aligned_cols=110 Identities=13% Similarity=0.177 Sum_probs=87.6
Q ss_pred cCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCccc
Q 023482 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVK 198 (281)
Q Consensus 124 ~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~ 198 (281)
++.+++...+++.+.+.++.+|||+|||+|.++..++.. +.+|+|+|+++.+++.|+++....+ ++ ++++|+.+
T Consensus 8 ~t~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~ 86 (178)
T 3hm2_A 8 LTKQHVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPR 86 (178)
T ss_dssp SHHHHHHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTG
T ss_pred ccHHHHHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHh
Confidence 456678888899998888899999999999999999987 6799999999999999999987653 78 88899865
Q ss_pred cccccchhhHHHhhcCCCCccEEEEcCCCcc--cHHHHHHhccCCCCcc
Q 023482 199 CHIRSHMLSLFERRKSSSGFAKVVANIPFNI--STDVIKQLLPMGDIFS 245 (281)
Q Consensus 199 ~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~--~~~~~~~ll~~~~~~~ 245 (281)
+++ ...+.||+|+++.+++. .-..+.++++++|.+.
T Consensus 87 -~~~----------~~~~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~ 124 (178)
T 3hm2_A 87 -AFD----------DVPDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLV 124 (178)
T ss_dssp -GGG----------GCCSCCSEEEECC-TTCTTHHHHHHHTCCTTCEEE
T ss_pred -hhh----------ccCCCCCEEEECCcccHHHHHHHHHHhcCCCCEEE
Confidence 221 11267999999887765 3455567888888764
No 41
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.44 E-value=4.2e-13 Score=117.10 Aligned_cols=93 Identities=23% Similarity=0.303 Sum_probs=70.4
Q ss_pred HHHHhcCCCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcC---CC---CeEEEEcCccccccccc
Q 023482 133 LAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFAS---ID---QLKVLQEDFVKCHIRSH 204 (281)
Q Consensus 133 l~~~l~~~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~---~~---~v~~~~gD~~~~~~~d~ 204 (281)
+...+...++.+|||+|||+|.++..++.. +.+|+|||+++.+++.|++++.. ++ +++++++|+.+....
T Consensus 28 L~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~-- 105 (260)
T 2ozv_A 28 LASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKA-- 105 (260)
T ss_dssp HHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHH--
T ss_pred HHHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhh--
Confidence 344455667789999999999999999988 46999999999999999999876 53 699999999886210
Q ss_pred hhhHHHhhcCCCCccEEEEcCCCccc
Q 023482 205 MLSLFERRKSSSGFAKVVANIPFNIS 230 (281)
Q Consensus 205 ~~d~v~~~~~~~~~d~Vi~n~P~~~~ 230 (281)
........+.||+|++||||...
T Consensus 106 ---~~~~~~~~~~fD~Vv~nPPy~~~ 128 (260)
T 2ozv_A 106 ---RVEAGLPDEHFHHVIMNPPYNDA 128 (260)
T ss_dssp ---HHHTTCCTTCEEEEEECCCC---
T ss_pred ---hhhhccCCCCcCEEEECCCCcCC
Confidence 00000123689999999999764
No 42
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.43 E-value=1e-12 Score=113.37 Aligned_cols=112 Identities=15% Similarity=0.212 Sum_probs=88.8
Q ss_pred cCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCcccc
Q 023482 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKC 199 (281)
Q Consensus 124 ~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~~~ 199 (281)
...+..+..+++.+.+.++.+|||||||+|.++..+++. +.+|+|+|+++.+++.|+++.... ++++++++|+.++
T Consensus 19 ~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~ 98 (256)
T 1nkv_A 19 PFTEEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY 98 (256)
T ss_dssp SCCHHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC
T ss_pred CCCHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhC
Confidence 345677888899998889999999999999999999987 779999999999999999987644 3799999999988
Q ss_pred ccccchhhHHHhhcCCCCccEEEEcCCCccc---H---HHHHHhccCCCCcceEE
Q 023482 200 HIRSHMLSLFERRKSSSGFAKVVANIPFNIS---T---DVIKQLLPMGDIFSEVV 248 (281)
Q Consensus 200 ~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~---~---~~~~~ll~~~~~~~~~~ 248 (281)
++ + +.||+|+++..++.. . ..+.+++++||.+....
T Consensus 99 ~~-~------------~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 99 VA-N------------EKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp CC-S------------SCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred Cc-C------------CCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence 64 2 679999986544332 2 23346777777664433
No 43
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.43 E-value=7.4e-13 Score=108.08 Aligned_cols=91 Identities=14% Similarity=0.294 Sum_probs=73.4
Q ss_pred HHHHHHHHHHhc-CCCCCEEEEEcCCccHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCcccccc
Q 023482 127 SEINDQLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNAG-ATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHI 201 (281)
Q Consensus 127 ~~~~~~l~~~l~-~~~~~~VLDiGcG~G~~t~~la~~~-~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~~~~ 201 (281)
..+.+.+++.+. ..++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|+++....+ +++++++|+.+...
T Consensus 16 ~~~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 95 (177)
T 2esr_A 16 DKVRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAID 95 (177)
T ss_dssp --CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHH
Confidence 345666777766 5677899999999999999999885 599999999999999999987653 79999999987311
Q ss_pred ccchhhHHHhhcCCCCccEEEEcCCCc
Q 023482 202 RSHMLSLFERRKSSSGFAKVVANIPFN 228 (281)
Q Consensus 202 ~d~~~d~v~~~~~~~~~d~Vi~n~P~~ 228 (281)
...+.||+|++|+||.
T Consensus 96 -----------~~~~~fD~i~~~~~~~ 111 (177)
T 2esr_A 96 -----------CLTGRFDLVFLDPPYA 111 (177)
T ss_dssp -----------HBCSCEEEEEECCSSH
T ss_pred -----------hhcCCCCEEEECCCCC
Confidence 1225699999999984
No 44
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.43 E-value=1.4e-12 Score=107.11 Aligned_cols=106 Identities=18% Similarity=0.303 Sum_probs=86.3
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCC--C--eEEEEcCcccccccc
Q 023482 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID--Q--LKVLQEDFVKCHIRS 203 (281)
Q Consensus 128 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~--~--v~~~~gD~~~~~~~d 203 (281)
...+.+++.+...++.+|||+|||+|.++..+++.+.+++|+|+++.+++.|+++....+ + ++++++|+.+..
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~--- 115 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV--- 115 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC---
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhccc---
Confidence 678888898888888999999999999999999988899999999999999999886543 4 999999998732
Q ss_pred chhhHHHhhcCCCCccEEEEcCCCcccH----HHH---HHhccCCCCcce
Q 023482 204 HMLSLFERRKSSSGFAKVVANIPFNIST----DVI---KQLLPMGDIFSE 246 (281)
Q Consensus 204 ~~~d~v~~~~~~~~~d~Vi~n~P~~~~~----~~~---~~ll~~~~~~~~ 246 (281)
..+.||+|++++||+... .++ .++++++|.+-.
T Consensus 116 ----------~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~ 155 (194)
T 1dus_A 116 ----------KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWV 155 (194)
T ss_dssp ----------TTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ----------ccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEE
Confidence 236799999999998632 222 366777776533
No 45
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.43 E-value=4e-13 Score=120.50 Aligned_cols=109 Identities=15% Similarity=0.168 Sum_probs=92.1
Q ss_pred cCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEcCccc
Q 023482 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG---ATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVK 198 (281)
Q Consensus 124 ~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~---~~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~gD~~~ 198 (281)
...+.....+++.+.+.++.+|||||||+|.++..+++.+ .+|+|+|+++++++.|+++.... .+++++++|+.+
T Consensus 58 ~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~ 137 (317)
T 1dl5_A 58 SSQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYY 137 (317)
T ss_dssp ECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG
T ss_pred ccCHHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhh
Confidence 3567889999999999899999999999999999999874 46999999999999999998654 379999999988
Q ss_pred cccccchhhHHHhhcCCCCccEEEEcCCCcccHHHHHHhccCCCCc
Q 023482 199 CHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIF 244 (281)
Q Consensus 199 ~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~ 244 (281)
.+.. .+.||+|+++.+++.....+.++++++|.+
T Consensus 138 ~~~~------------~~~fD~Iv~~~~~~~~~~~~~~~LkpgG~l 171 (317)
T 1dl5_A 138 GVPE------------FSPYDVIFVTVGVDEVPETWFTQLKEGGRV 171 (317)
T ss_dssp CCGG------------GCCEEEEEECSBBSCCCHHHHHHEEEEEEE
T ss_pred cccc------------CCCeEEEEEcCCHHHHHHHHHHhcCCCcEE
Confidence 5432 267999999988877767778888888765
No 46
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.43 E-value=4e-13 Score=108.53 Aligned_cols=114 Identities=14% Similarity=0.153 Sum_probs=84.6
Q ss_pred ccCCHHHHHHHHHHhcCC--CCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCC-CeEEEEcCcccc
Q 023482 123 YMLNSEINDQLAAAAAVQ--EGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKC 199 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l~~~--~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~-~v~~~~gD~~~~ 199 (281)
..+...+.+.++..+... ++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.|+++....+ +++++++|+.+.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~ 100 (171)
T 1ws6_A 21 RPSPVRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVF 100 (171)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHH
T ss_pred CCCHHHHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHH
Confidence 445567777777776542 67899999999999999999998889999999999999999887555 899999999873
Q ss_pred ccccchhhHHHhhcCCCCccEEEEcCCCc-ccHHHHH-----HhccCCCCc
Q 023482 200 HIRSHMLSLFERRKSSSGFAKVVANIPFN-ISTDVIK-----QLLPMGDIF 244 (281)
Q Consensus 200 ~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~-~~~~~~~-----~ll~~~~~~ 244 (281)
... .- ...+.||+|++|+||+ .....+. ++++++|.+
T Consensus 101 ~~~-----~~---~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~L~~gG~~ 143 (171)
T 1ws6_A 101 LPE-----AK---AQGERFTVAFMAPPYAMDLAALFGELLASGLVEAGGLY 143 (171)
T ss_dssp HHH-----HH---HTTCCEEEEEECCCTTSCTTHHHHHHHHHTCEEEEEEE
T ss_pred HHh-----hh---ccCCceEEEEECCCCchhHHHHHHHHHhhcccCCCcEE
Confidence 210 00 1124799999999984 3333443 445555543
No 47
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.43 E-value=2.3e-13 Score=114.54 Aligned_cols=105 Identities=16% Similarity=0.160 Sum_probs=84.0
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhh
Q 023482 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLS 207 (281)
Q Consensus 128 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d 207 (281)
.....+...+...++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.|+++....++++++++|+.+++.
T Consensus 38 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~------ 111 (216)
T 3ofk_A 38 RHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFST------ 111 (216)
T ss_dssp HHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCC------
T ss_pred HHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCC------
Confidence 44455555666667789999999999999999999889999999999999999999877799999999998762
Q ss_pred HHHhhcCCCCccEEEEcCCCcccH---------HHHHHhccCCCCcc
Q 023482 208 LFERRKSSSGFAKVVANIPFNIST---------DVIKQLLPMGDIFS 245 (281)
Q Consensus 208 ~v~~~~~~~~~d~Vi~n~P~~~~~---------~~~~~ll~~~~~~~ 245 (281)
.+.||+|+++..++... ..+.++++++|.+.
T Consensus 112 -------~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~ 151 (216)
T 3ofk_A 112 -------AELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLV 151 (216)
T ss_dssp -------SCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEE
T ss_pred -------CCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 26899999986654332 12346777777654
No 48
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.42 E-value=9e-13 Score=111.20 Aligned_cols=107 Identities=16% Similarity=0.271 Sum_probs=82.9
Q ss_pred CHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhcCCC-------CeEEEEcCc
Q 023482 126 NSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG--ATVLAIEKDQHMVGLVRERFASID-------QLKVLQEDF 196 (281)
Q Consensus 126 ~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~--~~v~gvD~s~~~l~~a~~~~~~~~-------~v~~~~gD~ 196 (281)
.+...+.+.+.+...++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|++++...+ +++++++|+
T Consensus 14 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 93 (217)
T 3jwh_A 14 NQQRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGAL 93 (217)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCT
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCc
Confidence 34556677777776778899999999999999999974 599999999999999999986543 799999998
Q ss_pred cccccccchhhHHHhhcCCCCccEEEEcCCCcccH-H-------HHHHhccCCCCc
Q 023482 197 VKCHIRSHMLSLFERRKSSSGFAKVVANIPFNIST-D-------VIKQLLPMGDIF 244 (281)
Q Consensus 197 ~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~-~-------~~~~ll~~~~~~ 244 (281)
...+.. .+.||+|+++..++... + .+.+++++++.+
T Consensus 94 ~~~~~~------------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l 137 (217)
T 3jwh_A 94 TYQDKR------------FHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVI 137 (217)
T ss_dssp TSCCGG------------GCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEE
T ss_pred cccccc------------CCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEE
Confidence 766533 26799999976654322 1 234677777743
No 49
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.42 E-value=6.9e-14 Score=117.00 Aligned_cols=94 Identities=15% Similarity=0.276 Sum_probs=58.5
Q ss_pred HHHHHHHHhcC-CCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCCC-CeEEEEcCccccccccc
Q 023482 129 INDQLAAAAAV-QEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHIRSH 204 (281)
Q Consensus 129 ~~~~l~~~l~~-~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~~-~v~~~~gD~~~~~~~d~ 204 (281)
+++.+++.+.. .++.+|||+|||+|.++..+++. +.+++|+|+++.+++.|+++....+ +++++++|+.+ ++.+.
T Consensus 17 ~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~ 95 (215)
T 4dzr_A 17 LVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-WLIER 95 (215)
T ss_dssp HHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHH-HHHHH
T ss_pred HHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh-hhhhh
Confidence 45566666654 57789999999999999999998 5599999999999999999887655 78899999887 32210
Q ss_pred hhhHHHhhcCCCCccEEEEcCCCccc
Q 023482 205 MLSLFERRKSSSGFAKVVANIPFNIS 230 (281)
Q Consensus 205 ~~d~v~~~~~~~~~d~Vi~n~P~~~~ 230 (281)
. ...+.||+|++|+||...
T Consensus 96 ----~---~~~~~fD~i~~npp~~~~ 114 (215)
T 4dzr_A 96 ----A---ERGRPWHAIVSNPPYIPT 114 (215)
T ss_dssp ----H---HTTCCBSEEEECCCCCC-
T ss_pred ----h---hccCcccEEEECCCCCCC
Confidence 0 123789999999999653
No 50
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.42 E-value=5e-13 Score=109.64 Aligned_cols=114 Identities=15% Similarity=0.313 Sum_probs=84.2
Q ss_pred ccCCHHHHHHHHHHhc-CCCCCEEEEEcCCccHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCcc
Q 023482 123 YMLNSEINDQLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNAG-ATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFV 197 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l~-~~~~~~VLDiGcG~G~~t~~la~~~-~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~ 197 (281)
..+...+.+.++..+. ..++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|+++.... ++++++++|+.
T Consensus 25 rp~~~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 104 (187)
T 2fhp_A 25 RPTTDKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDAN 104 (187)
T ss_dssp CCCCHHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH
T ss_pred CcCHHHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHH
Confidence 3456677788888874 3467899999999999999988875 59999999999999999988644 37999999998
Q ss_pred ccccccchhhHHHhhcCCCCccEEEEcCCCcc--cHHHHHHh-----ccCCCCc
Q 023482 198 KCHIRSHMLSLFERRKSSSGFAKVVANIPFNI--STDVIKQL-----LPMGDIF 244 (281)
Q Consensus 198 ~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~--~~~~~~~l-----l~~~~~~ 244 (281)
+.... +. ...+.||+|++|+||.. ....+..+ ++++|.+
T Consensus 105 ~~~~~-----~~---~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l 150 (187)
T 2fhp_A 105 RALEQ-----FY---EEKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVI 150 (187)
T ss_dssp HHHHH-----HH---HTTCCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHH-----HH---hcCCCCCEEEECCCCCchhHHHHHHHHHHhcccCCCCEE
Confidence 74210 00 12468999999999753 23444443 4555543
No 51
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.41 E-value=9.1e-13 Score=121.23 Aligned_cols=104 Identities=25% Similarity=0.375 Sum_probs=81.8
Q ss_pred HHHHHHHHhc--CCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCC-CeEEEEcCccccccccch
Q 023482 129 INDQLAAAAA--VQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHIRSHM 205 (281)
Q Consensus 129 ~~~~l~~~l~--~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~-~v~~~~gD~~~~~~~d~~ 205 (281)
+.+.+.+.+. ..++.+|||+|||+|.++..+++.+.+|+++|+|+.+++.|+++...++ +++++++|+.+.+..
T Consensus 219 ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~--- 295 (381)
T 3dmg_A 219 LLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTE--- 295 (381)
T ss_dssp HHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCT---
T ss_pred HHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhcccc---
Confidence 3444444432 3367799999999999999999998999999999999999999988665 799999999987532
Q ss_pred hhHHHhhcCCCCccEEEEcCCCcc-----cH---HH---HHHhccCCCCc
Q 023482 206 LSLFERRKSSSGFAKVVANIPFNI-----ST---DV---IKQLLPMGDIF 244 (281)
Q Consensus 206 ~d~v~~~~~~~~~d~Vi~n~P~~~-----~~---~~---~~~ll~~~~~~ 244 (281)
.+.||+|++|+||+. .. .+ +.++++++|.+
T Consensus 296 ---------~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l 336 (381)
T 3dmg_A 296 ---------EARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVF 336 (381)
T ss_dssp ---------TCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEE
T ss_pred ---------CCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEE
Confidence 368999999999986 21 22 24667777655
No 52
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.41 E-value=8.6e-13 Score=114.77 Aligned_cols=110 Identities=15% Similarity=0.214 Sum_probs=87.9
Q ss_pred ccccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccc
Q 023482 121 QHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCH 200 (281)
Q Consensus 121 ~~~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~ 200 (281)
......+.+.+.+++.+...++.+|||||||+|.++..+++.+.+|+|+|+++.+++.|+++. +++++++|+.+++
T Consensus 14 ~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~----~~~~~~~d~~~~~ 89 (261)
T 3ege_A 14 QTRVPDIRIVNAIINLLNLPKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVHP----QVEWFTGYAENLA 89 (261)
T ss_dssp CSBCCCHHHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCCT----TEEEECCCTTSCC
T ss_pred hcccccHHHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhcc----CCEEEECchhhCC
Confidence 334456788999999998888899999999999999999998899999999999998876543 8999999999987
Q ss_pred cccchhhHHHhhcCCCCccEEEEcCCCcccH------HHHHHhccCCCCcceE
Q 023482 201 IRSHMLSLFERRKSSSGFAKVVANIPFNIST------DVIKQLLPMGDIFSEV 247 (281)
Q Consensus 201 ~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~------~~~~~ll~~~~~~~~~ 247 (281)
+++ +.||+|+++..++... ..+.++++ ||.+...
T Consensus 90 ~~~------------~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~ 129 (261)
T 3ege_A 90 LPD------------KSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLL 129 (261)
T ss_dssp SCT------------TCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEE
T ss_pred CCC------------CCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEE
Confidence 543 6799999987654322 23347788 8865333
No 53
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.41 E-value=7.2e-13 Score=111.86 Aligned_cols=107 Identities=14% Similarity=0.226 Sum_probs=82.1
Q ss_pred CHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhcCCC-------CeEEEEcCc
Q 023482 126 NSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG--ATVLAIEKDQHMVGLVRERFASID-------QLKVLQEDF 196 (281)
Q Consensus 126 ~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~--~~v~gvD~s~~~l~~a~~~~~~~~-------~v~~~~gD~ 196 (281)
.+...+.+.+.+...++.+|||||||+|.++..+++.+ .+|+|+|+|+.+++.|++++...+ +++++++|+
T Consensus 14 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 93 (219)
T 3jwg_A 14 NQQRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSL 93 (219)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCS
T ss_pred hHHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcc
Confidence 34456666677766678899999999999999999875 699999999999999999876442 899999999
Q ss_pred cccccccchhhHHHhhcCCCCccEEEEcCCCcccH-----HH---HHHhccCCCCc
Q 023482 197 VKCHIRSHMLSLFERRKSSSGFAKVVANIPFNIST-----DV---IKQLLPMGDIF 244 (281)
Q Consensus 197 ~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~-----~~---~~~ll~~~~~~ 244 (281)
...+.. .+.||+|+++..++... .+ +.+++++++.+
T Consensus 94 ~~~~~~------------~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~ 137 (219)
T 3jwg_A 94 VYRDKR------------FSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVI 137 (219)
T ss_dssp SSCCGG------------GTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEE
T ss_pred cccccc------------cCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEE
Confidence 776643 26799999876554332 22 34667777643
No 54
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.41 E-value=8.9e-13 Score=116.62 Aligned_cols=88 Identities=18% Similarity=0.278 Sum_probs=72.4
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCcccccccc
Q 023482 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRS 203 (281)
Q Consensus 128 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~~~~~d 203 (281)
.+++.+++.+...++.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.|+++...++ +++++++|+.+.. .
T Consensus 110 ~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~-~- 187 (284)
T 1nv8_A 110 ELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPF-K- 187 (284)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG-G-
T ss_pred HHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhc-c-
Confidence 45566666665446679999999999999999998 7799999999999999999987653 5999999998731 1
Q ss_pred chhhHHHhhcCCCCc---cEEEEcCCCcc
Q 023482 204 HMLSLFERRKSSSGF---AKVVANIPFNI 229 (281)
Q Consensus 204 ~~~d~v~~~~~~~~~---d~Vi~n~P~~~ 229 (281)
+.| |+|++||||..
T Consensus 188 ------------~~f~~~D~IvsnPPyi~ 204 (284)
T 1nv8_A 188 ------------EKFASIEMILSNPPYVK 204 (284)
T ss_dssp ------------GGTTTCCEEEECCCCBC
T ss_pred ------------cccCCCCEEEEcCCCCC
Confidence 357 99999999964
No 55
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.40 E-value=3.2e-12 Score=113.46 Aligned_cols=107 Identities=14% Similarity=0.164 Sum_probs=87.6
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCccccccccc
Q 023482 129 INDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSH 204 (281)
Q Consensus 129 ~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~~~~~d~ 204 (281)
....+++.+.+.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++....+ +++++++|+.+++
T Consensus 60 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---- 135 (302)
T 3hem_A 60 KRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFD---- 135 (302)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCC----
T ss_pred HHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHcC----
Confidence 4566778888888999999999999999999998 8999999999999999999987543 8999999998751
Q ss_pred hhhHHHhhcCCCCccEEEEcCCCccc------------H---HHHHHhccCCCCcceEEEe
Q 023482 205 MLSLFERRKSSSGFAKVVANIPFNIS------------T---DVIKQLLPMGDIFSEVVLL 250 (281)
Q Consensus 205 ~~d~v~~~~~~~~~d~Vi~n~P~~~~------------~---~~~~~ll~~~~~~~~~~~~ 250 (281)
+.||+|+++..++.. . ..+.++++++|.+......
T Consensus 136 -----------~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 185 (302)
T 3hem_A 136 -----------EPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTIT 185 (302)
T ss_dssp -----------CCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEE
T ss_pred -----------CCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 689999998666444 2 3345888999987555443
No 56
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.40 E-value=1e-12 Score=112.72 Aligned_cols=110 Identities=13% Similarity=0.155 Sum_probs=88.4
Q ss_pred CHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEcCcccccccc
Q 023482 126 NSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRS 203 (281)
Q Consensus 126 ~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~gD~~~~~~~d 203 (281)
++.....+++.+.+.++.+|||||||+|.++..+++.+.+|+|+|+++.+++.++++.... .+++++++|+.++++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 85 (239)
T 1xxl_A 6 HHHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPD 85 (239)
T ss_dssp CHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCT
T ss_pred cCCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCC
Confidence 3456677888889999999999999999999999998889999999999999999887543 48999999999887543
Q ss_pred chhhHHHhhcCCCCccEEEEcCCCcccH------HHHHHhccCCCCcceE
Q 023482 204 HMLSLFERRKSSSGFAKVVANIPFNIST------DVIKQLLPMGDIFSEV 247 (281)
Q Consensus 204 ~~~d~v~~~~~~~~~d~Vi~n~P~~~~~------~~~~~ll~~~~~~~~~ 247 (281)
+.||+|+++..+++.. ..+.++++++|.+...
T Consensus 86 ------------~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 123 (239)
T 1xxl_A 86 ------------DSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLV 123 (239)
T ss_dssp ------------TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------------CcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEE
Confidence 6799999985543322 3335778888876443
No 57
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.40 E-value=3.4e-12 Score=108.65 Aligned_cols=103 Identities=16% Similarity=0.041 Sum_probs=79.8
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCcc-ccccccchh
Q 023482 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFV-KCHIRSHML 206 (281)
Q Consensus 128 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~-~~~~~d~~~ 206 (281)
.+...++.... .++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.|+++. .+++++++|+. .+|+.
T Consensus 36 ~l~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~d~~~~~~~~---- 107 (226)
T 3m33_A 36 LTFDLWLSRLL-TPQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARANA---PHADVYEWNGKGELPAG---- 107 (226)
T ss_dssp HHHHHHHHHHC-CTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHC---TTSEEEECCSCSSCCTT----
T ss_pred HHHHHHHHhcC-CCCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhC---CCceEEEcchhhccCCc----
Confidence 34444444332 46789999999999999999999899999999999999999983 48999999994 55542
Q ss_pred hHHHhhcCCCCccEEEEcCCCcccHHHHHHhccCCCCcc
Q 023482 207 SLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFS 245 (281)
Q Consensus 207 d~v~~~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~~ 245 (281)
..+.||+|+++......-..+.++++++|.+.
T Consensus 108 -------~~~~fD~v~~~~~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 108 -------LGAPFGLIVSRRGPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp -------CCCCEEEEEEESCCSGGGGGHHHHEEEEEEEE
T ss_pred -------CCCCEEEEEeCCCHHHHHHHHHHHcCCCcEEE
Confidence 13689999998655555556677888877664
No 58
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.40 E-value=2.3e-12 Score=112.33 Aligned_cols=110 Identities=20% Similarity=0.253 Sum_probs=87.8
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCccccccc
Q 023482 127 SEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIR 202 (281)
Q Consensus 127 ~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~~~~~~ 202 (281)
..+.+.+++.+.+.++.+|||||||+|.++..+++. +.+|+|+|+++.+++.|+++.... ++++++.+|+.+++++
T Consensus 47 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 126 (273)
T 3bus_A 47 DRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFE 126 (273)
T ss_dssp HHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSC
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCC
Confidence 345677888888888999999999999999999986 789999999999999999887643 3799999999998754
Q ss_pred cchhhHHHhhcCCCCccEEEEcCCCcccH------HHHHHhccCCCCcceEE
Q 023482 203 SHMLSLFERRKSSSGFAKVVANIPFNIST------DVIKQLLPMGDIFSEVV 248 (281)
Q Consensus 203 d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~------~~~~~ll~~~~~~~~~~ 248 (281)
+ +.||+|+++..+++.. ..+.++++++|.+....
T Consensus 127 ~------------~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 127 D------------ASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp T------------TCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred C------------CCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 3 6799999986664432 23347778887764443
No 59
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.40 E-value=6.4e-13 Score=122.23 Aligned_cols=110 Identities=12% Similarity=0.123 Sum_probs=86.2
Q ss_pred CCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHhcC-----------CCCeEE
Q 023482 125 LNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-GA-TVLAIEKDQHMVGLVRERFAS-----------IDQLKV 191 (281)
Q Consensus 125 ~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~-~~-~v~gvD~s~~~l~~a~~~~~~-----------~~~v~~ 191 (281)
+.+..+..+++.+.+.++++|||||||+|.+++.++.. ++ +|+|||+++.+++.|+++... .++|+|
T Consensus 157 t~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVef 236 (438)
T 3uwp_A 157 TSFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTL 236 (438)
T ss_dssp THHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEE
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEE
Confidence 44678889999999999999999999999999999875 55 699999999999999875421 258999
Q ss_pred EEcCccccccccchhhHHHhhcCCCCccEEEEcCCCcccH-----HHHHHhccCCCCc
Q 023482 192 LQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNIST-----DVIKQLLPMGDIF 244 (281)
Q Consensus 192 ~~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~-----~~~~~ll~~~~~~ 244 (281)
++||+.++++.+. + +.+|+|++|.++.... ..+.+.+++|+.+
T Consensus 237 i~GD~~~lp~~d~----~------~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrI 284 (438)
T 3uwp_A 237 ERGDFLSEEWRER----I------ANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRI 284 (438)
T ss_dssp EECCTTSHHHHHH----H------HTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEE
T ss_pred EECcccCCccccc----c------CCccEEEEcccccCchHHHHHHHHHHcCCCCcEE
Confidence 9999999876421 1 3589999998875432 1123667787765
No 60
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.39 E-value=1e-12 Score=109.12 Aligned_cols=100 Identities=17% Similarity=0.283 Sum_probs=77.9
Q ss_pred HhcCCCCCEEEEEcCCccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCccccccccchhhHH
Q 023482 136 AAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRSHMLSLF 209 (281)
Q Consensus 136 ~l~~~~~~~VLDiGcG~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~~~~~~d~~~d~v 209 (281)
...+.++.+|||+|||+|.++..+++. ..+|+|+|+++.+++.|+++.... ++++++++|+.+++.
T Consensus 17 ~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-------- 88 (197)
T 3eey_A 17 KMFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDK-------- 88 (197)
T ss_dssp HHHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGG--------
T ss_pred HhcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhh--------
Confidence 345567889999999999999999987 259999999999999999998764 389999999988752
Q ss_pred HhhcCCCCccEEEEcCCCcc---------------cHHHHHHhccCCCCcce
Q 023482 210 ERRKSSSGFAKVVANIPFNI---------------STDVIKQLLPMGDIFSE 246 (281)
Q Consensus 210 ~~~~~~~~~d~Vi~n~P~~~---------------~~~~~~~ll~~~~~~~~ 246 (281)
...+.||+|++|+||.. .-..+.++++++|.+..
T Consensus 89 ---~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~ 137 (197)
T 3eey_A 89 ---YIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITV 137 (197)
T ss_dssp ---TCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ---hccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEE
Confidence 12368999999998711 12333477788776643
No 61
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.39 E-value=1.4e-12 Score=109.22 Aligned_cols=107 Identities=19% Similarity=0.277 Sum_probs=85.4
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCccccccc
Q 023482 127 SEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIR 202 (281)
Q Consensus 127 ~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~~~~~~ 202 (281)
+.+...+++.+...++ +|||+|||+|.++..+++. +.+|+|+|+++.+++.|+++.... ++++++++|+.+++++
T Consensus 30 ~~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (219)
T 3dlc_A 30 PIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIE 108 (219)
T ss_dssp HHHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSC
T ss_pred HHHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCC
Confidence 4567778888877666 9999999999999999997 679999999999999999997654 3899999999998754
Q ss_pred cchhhHHHhhcCCCCccEEEEcCCCccc---H---HHHHHhccCCCCcce
Q 023482 203 SHMLSLFERRKSSSGFAKVVANIPFNIS---T---DVIKQLLPMGDIFSE 246 (281)
Q Consensus 203 d~~~d~v~~~~~~~~~d~Vi~n~P~~~~---~---~~~~~ll~~~~~~~~ 246 (281)
+ +.||+|+++..++.. . ..+.++++++|.+..
T Consensus 109 ~------------~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~ 146 (219)
T 3dlc_A 109 D------------NYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYI 146 (219)
T ss_dssp T------------TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEE
T ss_pred c------------ccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEE
Confidence 3 689999998765443 2 233467777776543
No 62
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.39 E-value=1e-12 Score=120.70 Aligned_cols=104 Identities=14% Similarity=0.185 Sum_probs=81.5
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCCC-----CeEEEEcCcccccc
Q 023482 129 INDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASID-----QLKVLQEDFVKCHI 201 (281)
Q Consensus 129 ~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~~-----~v~~~~gD~~~~~~ 201 (281)
....+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++...++ +++++.+|+.+.
T Consensus 210 ~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~-- 287 (375)
T 4dcm_A 210 GARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG-- 287 (375)
T ss_dssp HHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTT--
T ss_pred HHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhcc--
Confidence 4556778887777789999999999999999998 5799999999999999999987543 688999999873
Q ss_pred ccchhhHHHhhcCCCCccEEEEcCCCcccH-----------HHHHHhccCCCCcc
Q 023482 202 RSHMLSLFERRKSSSGFAKVVANIPFNIST-----------DVIKQLLPMGDIFS 245 (281)
Q Consensus 202 ~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~-----------~~~~~ll~~~~~~~ 245 (281)
...+.||+|++||||+... ..+.++++++|.+.
T Consensus 288 -----------~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 331 (375)
T 4dcm_A 288 -----------VEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELY 331 (375)
T ss_dssp -----------CCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEE
T ss_pred -----------CCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEE
Confidence 2236899999999997421 23346677777653
No 63
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.38 E-value=2.4e-12 Score=111.28 Aligned_cols=109 Identities=23% Similarity=0.344 Sum_probs=84.5
Q ss_pred HHHHHHHHHHh-----cCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC-CCCeEEEEcCccccc
Q 023482 127 SEINDQLAAAA-----AVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFAS-IDQLKVLQEDFVKCH 200 (281)
Q Consensus 127 ~~~~~~l~~~l-----~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~-~~~v~~~~gD~~~~~ 200 (281)
......+++.+ .+.++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.|+++... ..+++++++|+.+++
T Consensus 20 ~~~~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~ 99 (263)
T 2yqz_A 20 PEVAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIP 99 (263)
T ss_dssp HHHHHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCC
T ss_pred hHHHHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCC
Confidence 34445555544 456788999999999999999999888999999999999999998732 248999999999887
Q ss_pred cccchhhHHHhhcCCCCccEEEEcCCCcccH------HHHHHhccCCCCcceE
Q 023482 201 IRSHMLSLFERRKSSSGFAKVVANIPFNIST------DVIKQLLPMGDIFSEV 247 (281)
Q Consensus 201 ~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~------~~~~~ll~~~~~~~~~ 247 (281)
+.+ +.||+|+++..+++.. ..+.++++++|.+...
T Consensus 100 ~~~------------~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 100 LPD------------ESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp SCT------------TCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCC------------CCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 533 6799999987765542 2234778888876443
No 64
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.38 E-value=2e-12 Score=109.03 Aligned_cols=103 Identities=28% Similarity=0.406 Sum_probs=82.7
Q ss_pred HHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHH
Q 023482 131 DQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFE 210 (281)
Q Consensus 131 ~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~ 210 (281)
..+++.+...++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.++++.. .+++++++|+.++++
T Consensus 35 ~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~~d~~~~~~--------- 103 (220)
T 3hnr_A 35 EDILEDVVNKSFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLP--KEFSITEGDFLSFEV--------- 103 (220)
T ss_dssp HHHHHHHHHTCCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSC--TTCCEESCCSSSCCC---------
T ss_pred HHHHHHhhccCCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCC--CceEEEeCChhhcCC---------
Confidence 345555555578899999999999999999998999999999999999999876 589999999999864
Q ss_pred hhcCCCCccEEEEcCCCcccH--------HHHHHhccCCCCcceEE
Q 023482 211 RRKSSSGFAKVVANIPFNIST--------DVIKQLLPMGDIFSEVV 248 (281)
Q Consensus 211 ~~~~~~~~d~Vi~n~P~~~~~--------~~~~~ll~~~~~~~~~~ 248 (281)
. +.||+|+++..++... ..+.++++++|.+....
T Consensus 104 ---~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 104 ---P-TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFAD 145 (220)
T ss_dssp ---C-SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ---C-CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 2 6899999986664422 23347888888775443
No 65
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.38 E-value=3.6e-12 Score=110.96 Aligned_cols=112 Identities=13% Similarity=0.136 Sum_probs=87.4
Q ss_pred CCHHHHHHHHHHhc-CCCCCEEEEEcCCccHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCcccc
Q 023482 125 LNSEINDQLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNAG-ATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKC 199 (281)
Q Consensus 125 ~~~~~~~~l~~~l~-~~~~~~VLDiGcG~G~~t~~la~~~-~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~~~ 199 (281)
........++..+. +.++.+|||||||+|.++..+++.+ .+|+|+|+++.+++.|+++.... ++++++++|+.++
T Consensus 29 ~~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 108 (267)
T 3kkz_A 29 GSPEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDL 108 (267)
T ss_dssp CCHHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred CCHHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhC
Confidence 34566667777766 6678899999999999999999984 49999999999999999988654 3699999999998
Q ss_pred ccccchhhHHHhhcCCCCccEEEEcCCCcccH-----HHHHHhccCCCCcceEE
Q 023482 200 HIRSHMLSLFERRKSSSGFAKVVANIPFNIST-----DVIKQLLPMGDIFSEVV 248 (281)
Q Consensus 200 ~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~-----~~~~~ll~~~~~~~~~~ 248 (281)
+++ .+.||+|+++..++... ..+.++++++|.+....
T Consensus 109 ~~~------------~~~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 109 PFR------------NEELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp CCC------------TTCEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCC------------CCCEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEE
Confidence 753 36899999987665432 22346778887764443
No 66
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.38 E-value=1.9e-12 Score=109.80 Aligned_cols=110 Identities=14% Similarity=0.210 Sum_probs=90.4
Q ss_pred ccCCHHHHHHHHHHhc--CCCCCEEEEEcCCccHHHHHHHHc-C--CEEEEEeCCHHHHHHHHHHhcC-------CCCeE
Q 023482 123 YMLNSEINDQLAAAAA--VQEGDIVLEIGPGTGSLTNVLLNA-G--ATVLAIEKDQHMVGLVRERFAS-------IDQLK 190 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l~--~~~~~~VLDiGcG~G~~t~~la~~-~--~~v~gvD~s~~~l~~a~~~~~~-------~~~v~ 190 (281)
.+..+.....+++.+. +.++.+|||+|||+|..+..+++. + .+|+++|+++.+++.++++... .++++
T Consensus 57 ~~~~p~~~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~ 136 (226)
T 1i1n_A 57 TISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQ 136 (226)
T ss_dssp EECCHHHHHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEE
T ss_pred eecCHHHHHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEE
Confidence 5667788888888886 678889999999999999999986 3 6999999999999999988764 34899
Q ss_pred EEEcCccccccccchhhHHHhhcCCCCccEEEEcCCCcccHHHHHHhccCCCCc
Q 023482 191 VLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIF 244 (281)
Q Consensus 191 ~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~ 244 (281)
++++|+.+.+.. .+.||+|+.+.++......+.++++++|.+
T Consensus 137 ~~~~d~~~~~~~------------~~~fD~i~~~~~~~~~~~~~~~~LkpgG~l 178 (226)
T 1i1n_A 137 LVVGDGRMGYAE------------EAPYDAIHVGAAAPVVPQALIDQLKPGGRL 178 (226)
T ss_dssp EEESCGGGCCGG------------GCCEEEEEECSBBSSCCHHHHHTEEEEEEE
T ss_pred EEECCcccCccc------------CCCcCEEEECCchHHHHHHHHHhcCCCcEE
Confidence 999999865422 267999999988766666677888888765
No 67
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.38 E-value=2.7e-12 Score=109.31 Aligned_cols=106 Identities=21% Similarity=0.340 Sum_probs=83.8
Q ss_pred HHHHHHHhc-CCCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchh
Q 023482 130 NDQLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHML 206 (281)
Q Consensus 130 ~~~l~~~l~-~~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~ 206 (281)
...++..+. ..++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.|+++....++++++++|+.++++.
T Consensus 32 ~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~---- 107 (234)
T 3dtn_A 32 YGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFE---- 107 (234)
T ss_dssp HHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCC----
T ss_pred HHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCC----
Confidence 345555554 446789999999999999999998 7799999999999999999988777999999999998742
Q ss_pred hHHHhhcCCCCccEEEEcCCCcccH--------HHHHHhccCCCCcceEE
Q 023482 207 SLFERRKSSSGFAKVVANIPFNIST--------DVIKQLLPMGDIFSEVV 248 (281)
Q Consensus 207 d~v~~~~~~~~~d~Vi~n~P~~~~~--------~~~~~ll~~~~~~~~~~ 248 (281)
+.||+|+++..++... ..+.++++++|.+....
T Consensus 108 ---------~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 108 ---------EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp ---------SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---------CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 6799999987665433 22347778887764433
No 68
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.38 E-value=2.6e-12 Score=108.33 Aligned_cols=96 Identities=15% Similarity=0.225 Sum_probs=75.5
Q ss_pred CCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 141 EGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
++.+|||||||+|.++..++.. +.+|+|+|+++.+++.|+++.... .+++++++|+.+++-. ...+
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~----------~~~~ 110 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDY----------FEDG 110 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGT----------SCTT
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhh----------cCCC
Confidence 5779999999999999999987 579999999999999999987643 4899999999886510 1236
Q ss_pred CccEEEEcCCCcc--------------cHHHHHHhccCCCCcce
Q 023482 217 GFAKVVANIPFNI--------------STDVIKQLLPMGDIFSE 246 (281)
Q Consensus 217 ~~d~Vi~n~P~~~--------------~~~~~~~ll~~~~~~~~ 246 (281)
.||.|++|+|..+ .-..+.++++++|.+..
T Consensus 111 ~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 154 (214)
T 1yzh_A 111 EIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHF 154 (214)
T ss_dssp CCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEE
T ss_pred CCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEE
Confidence 7999999987532 22334577888887643
No 69
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.38 E-value=2.5e-12 Score=110.91 Aligned_cols=112 Identities=12% Similarity=0.136 Sum_probs=86.6
Q ss_pred CCHHHHHHHHHHh-cCCCCCEEEEEcCCccHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCcccc
Q 023482 125 LNSEINDQLAAAA-AVQEGDIVLEIGPGTGSLTNVLLNAG-ATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKC 199 (281)
Q Consensus 125 ~~~~~~~~l~~~l-~~~~~~~VLDiGcG~G~~t~~la~~~-~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~~ 199 (281)
..+.....++..+ .+.++.+|||||||+|..+..+++.+ .+|+|+|+++.+++.|+++....+ +++++++|+.++
T Consensus 29 ~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 108 (257)
T 3f4k_A 29 GSPEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNL 108 (257)
T ss_dssp CCHHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred CCHHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhC
Confidence 3456666677766 45677899999999999999999985 499999999999999999887543 599999999988
Q ss_pred ccccchhhHHHhhcCCCCccEEEEcCCCccc--H---HHHHHhccCCCCcceEE
Q 023482 200 HIRSHMLSLFERRKSSSGFAKVVANIPFNIS--T---DVIKQLLPMGDIFSEVV 248 (281)
Q Consensus 200 ~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~--~---~~~~~ll~~~~~~~~~~ 248 (281)
++.+ +.||+|+++..++.. . ..+.++++++|.+....
T Consensus 109 ~~~~------------~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 109 PFQN------------EELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp SSCT------------TCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCCC------------CCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence 7543 689999998665442 2 23346778887764443
No 70
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.38 E-value=1.1e-12 Score=112.24 Aligned_cols=105 Identities=20% Similarity=0.246 Sum_probs=78.4
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCC-CeEEEEcCcccc--ccc
Q 023482 127 SEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKC--HIR 202 (281)
Q Consensus 127 ~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~-~v~gvD~s~~~l~~a~~~~~~~~-~v~~~~gD~~~~--~~~ 202 (281)
..+...+...+ ..++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|+++....+ +++++++|+.++ ++.
T Consensus 47 ~~~~~~l~~~~-~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~ 125 (236)
T 1zx0_A 47 TPYMHALAAAA-SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLP 125 (236)
T ss_dssp HHHHHHHHHHH-TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSC
T ss_pred HHHHHHHHhhc-CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccC
Confidence 34445555444 45678999999999999999987654 99999999999999999887554 899999999987 543
Q ss_pred cchhhHHHhhcCCCCccEEEE-cCCCc----c-c-----HHHHHHhccCCCCc
Q 023482 203 SHMLSLFERRKSSSGFAKVVA-NIPFN----I-S-----TDVIKQLLPMGDIF 244 (281)
Q Consensus 203 d~~~d~v~~~~~~~~~d~Vi~-n~P~~----~-~-----~~~~~~ll~~~~~~ 244 (281)
.++||+|++ ..+.. . . -..+.++++++|.+
T Consensus 126 ------------~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l 166 (236)
T 1zx0_A 126 ------------DGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVL 166 (236)
T ss_dssp ------------TTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEE
T ss_pred ------------CCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEE
Confidence 367999998 22211 1 1 23356888888865
No 71
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.38 E-value=3.6e-12 Score=104.46 Aligned_cols=109 Identities=16% Similarity=0.208 Sum_probs=89.2
Q ss_pred cCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCccccc
Q 023482 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCH 200 (281)
Q Consensus 124 ~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~~~~ 200 (281)
.+...+...+++.+...++.+|||+|||+|.++..++..+.+|+++|+++.+++.++++.... .+++++++|+.+ +
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~ 94 (192)
T 1l3i_A 16 PTAMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-A 94 (192)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-H
T ss_pred CChHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-h
Confidence 667888889999999889999999999999999999998889999999999999999987644 489999999876 2
Q ss_pred cccchhhHHHhhcCCCCccEEEEcCCCcccHHHHH---HhccCCCCc
Q 023482 201 IRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIK---QLLPMGDIF 244 (281)
Q Consensus 201 ~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~~---~ll~~~~~~ 244 (281)
+ ...+.||+|+++.+++....++. ++++++|.+
T Consensus 95 ~-----------~~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l 130 (192)
T 1l3i_A 95 L-----------CKIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRI 130 (192)
T ss_dssp H-----------TTSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEE
T ss_pred c-----------ccCCCCCEEEECCchHHHHHHHHHHHHhcCCCcEE
Confidence 2 11257999999988765555554 566676655
No 72
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.37 E-value=1.4e-12 Score=114.92 Aligned_cols=105 Identities=16% Similarity=0.149 Sum_probs=83.3
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCcccccccc
Q 023482 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRS 203 (281)
Q Consensus 128 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~-~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~~~~~d 203 (281)
.....+...+ .++.+|||+|||+|.++..++..+. +|+|+|+|+.+++.|+++...++ +++++++|+.+++.
T Consensus 114 ~~~~~l~~~~--~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-- 189 (278)
T 2frn_A 114 KERVRMAKVA--KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-- 189 (278)
T ss_dssp HHHHHHHHHC--CTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--
T ss_pred HHHHHHHHhC--CCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc--
Confidence 4455555554 3688999999999999999999876 69999999999999999987543 59999999998753
Q ss_pred chhhHHHhhcCCCCccEEEEcCCCcc--cHHHHHHhccCCCCcceE
Q 023482 204 HMLSLFERRKSSSGFAKVVANIPFNI--STDVIKQLLPMGDIFSEV 247 (281)
Q Consensus 204 ~~~d~v~~~~~~~~~d~Vi~n~P~~~--~~~~~~~ll~~~~~~~~~ 247 (281)
...||+|++|+|+.. .-....+++++||.+-..
T Consensus 190 -----------~~~fD~Vi~~~p~~~~~~l~~~~~~LkpgG~l~~~ 224 (278)
T 2frn_A 190 -----------ENIADRILMGYVVRTHEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp -----------CSCEEEEEECCCSSGGGGHHHHHHHEEEEEEEEEE
T ss_pred -----------cCCccEEEECCchhHHHHHHHHHHHCCCCeEEEEE
Confidence 368999999999764 334456788888776433
No 73
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.37 E-value=2.6e-12 Score=113.76 Aligned_cols=103 Identities=18% Similarity=0.199 Sum_probs=78.8
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHH-HHHHHc-CCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEcCccccccccc
Q 023482 129 INDQLAAAAAVQEGDIVLEIGPGTGSLT-NVLLNA-GATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSH 204 (281)
Q Consensus 129 ~~~~l~~~l~~~~~~~VLDiGcG~G~~t-~~la~~-~~~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~gD~~~~~~~d~ 204 (281)
+++.....+.+.++++|||||||+|.++ ..+++. +++|+|||+|+++++.|+++++.. ++++++++|+.+++ +
T Consensus 110 l~~~E~~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d- 186 (298)
T 3fpf_A 110 LLKNEAALGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--G- 186 (298)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--G-
T ss_pred HHHHHHHHcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--C-
Confidence 4444456778889999999999998766 445553 889999999999999999987643 58999999998864 2
Q ss_pred hhhHHHhhcCCCCccEEEEcCCC---cccHHHHHHhccCCCCcc
Q 023482 205 MLSLFERRKSSSGFAKVVANIPF---NISTDVIKQLLPMGDIFS 245 (281)
Q Consensus 205 ~~d~v~~~~~~~~~d~Vi~n~P~---~~~~~~~~~ll~~~~~~~ 245 (281)
+.||+|+.+.-- ......+.+.+++||.+.
T Consensus 187 -----------~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lv 219 (298)
T 3fpf_A 187 -----------LEFDVLMVAALAEPKRRVFRNIHRYVDTETRII 219 (298)
T ss_dssp -----------CCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEE
T ss_pred -----------CCcCEEEECCCccCHHHHHHHHHHHcCCCcEEE
Confidence 678999875332 223345568888888764
No 74
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.37 E-value=3.2e-12 Score=114.07 Aligned_cols=107 Identities=10% Similarity=0.139 Sum_probs=84.7
Q ss_pred HHHHHHHhc-CCCCCEEEEEcCCccHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCccccccccc
Q 023482 130 NDQLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSH 204 (281)
Q Consensus 130 ~~~l~~~l~-~~~~~~VLDiGcG~G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~~~~~d~ 204 (281)
.+.+++.+. +.++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.|+++....+ +++++++|+.++++.+
T Consensus 105 ~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~- 183 (312)
T 3vc1_A 105 AEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDK- 183 (312)
T ss_dssp HHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCT-
T ss_pred HHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCC-
Confidence 344666666 778889999999999999999998 8899999999999999999887553 7999999999987543
Q ss_pred hhhHHHhhcCCCCccEEEEcCCCccc--H---HHHHHhccCCCCcceEE
Q 023482 205 MLSLFERRKSSSGFAKVVANIPFNIS--T---DVIKQLLPMGDIFSEVV 248 (281)
Q Consensus 205 ~~d~v~~~~~~~~~d~Vi~n~P~~~~--~---~~~~~ll~~~~~~~~~~ 248 (281)
+.||+|+++..++.. . ..+.+++++||.+....
T Consensus 184 -----------~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 184 -----------GAVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp -----------TCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----------CCEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 689999997554332 1 33357888888765444
No 75
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.36 E-value=2.1e-12 Score=107.93 Aligned_cols=93 Identities=23% Similarity=0.247 Sum_probs=75.3
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCC--CeEEEEcCccccccccchhhHHHhhcCC
Q 023482 139 VQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASID--QLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 139 ~~~~~~VLDiGcG~G~~t~~la~~~~-~v~gvD~s~~~l~~a~~~~~~~~--~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
+.++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.|+++....+ +++++++|+.+.. .
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--------------~ 123 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV--------------D 123 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC--------------C
T ss_pred ccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC--------------C
Confidence 45778999999999999999998855 99999999999999999987543 5999999997742 2
Q ss_pred CCccEEEEcCCCcccHHHHH---HhccCCCCcc
Q 023482 216 SGFAKVVANIPFNISTDVIK---QLLPMGDIFS 245 (281)
Q Consensus 216 ~~~d~Vi~n~P~~~~~~~~~---~ll~~~~~~~ 245 (281)
+.||+|+++++++....++. ++++++|.+.
T Consensus 124 ~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~ 156 (205)
T 3grz_A 124 GKFDLIVANILAEILLDLIPQLDSHLNEDGQVI 156 (205)
T ss_dssp SCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEE
T ss_pred CCceEEEECCcHHHHHHHHHHHHHhcCCCCEEE
Confidence 67999999999876554444 5556666553
No 76
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.36 E-value=2.7e-12 Score=110.64 Aligned_cols=103 Identities=17% Similarity=0.177 Sum_probs=81.7
Q ss_pred HHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHH
Q 023482 131 DQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLF 209 (281)
Q Consensus 131 ~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~-~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v 209 (281)
..+.+.+...++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.|+++.. ..+++++++|+.++++.
T Consensus 34 ~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~d~~~~~~~------- 105 (253)
T 3g5l_A 34 HELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT-SPVVCYEQKAIEDIAIE------- 105 (253)
T ss_dssp HHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC-CTTEEEEECCGGGCCCC-------
T ss_pred HHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc-cCCeEEEEcchhhCCCC-------
Confidence 3445555656788999999999999999999977 99999999999999999876 45899999999988753
Q ss_pred HhhcCCCCccEEEEcCCCcccH------HHHHHhccCCCCcce
Q 023482 210 ERRKSSSGFAKVVANIPFNIST------DVIKQLLPMGDIFSE 246 (281)
Q Consensus 210 ~~~~~~~~~d~Vi~n~P~~~~~------~~~~~ll~~~~~~~~ 246 (281)
.+.||+|+++..++... ..+.++++++|.+..
T Consensus 106 -----~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 143 (253)
T 3g5l_A 106 -----PDAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIF 143 (253)
T ss_dssp -----TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEE
T ss_pred -----CCCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEE
Confidence 36899999987654432 233577788876533
No 77
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.36 E-value=5e-12 Score=111.63 Aligned_cols=111 Identities=14% Similarity=0.158 Sum_probs=88.0
Q ss_pred HHHHHHHHHHh----cCCCCCEEEEEcCCccHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCccc
Q 023482 127 SEINDQLAAAA----AVQEGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVK 198 (281)
Q Consensus 127 ~~~~~~l~~~l----~~~~~~~VLDiGcG~G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~~ 198 (281)
......++..+ .+.++.+|||||||+|..+..+++. +.+|+|+|+++.+++.|+++.... ++++++++|+.+
T Consensus 64 ~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 143 (297)
T 2o57_A 64 LRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLE 143 (297)
T ss_dssp HHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTS
T ss_pred HHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCccc
Confidence 45567788888 7778899999999999999999987 889999999999999999887533 379999999999
Q ss_pred cccccchhhHHHhhcCCCCccEEEEcCCCccc------HHHHHHhccCCCCcceEEE
Q 023482 199 CHIRSHMLSLFERRKSSSGFAKVVANIPFNIS------TDVIKQLLPMGDIFSEVVL 249 (281)
Q Consensus 199 ~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~------~~~~~~ll~~~~~~~~~~~ 249 (281)
+|+++ +.||+|+++..++.. -..+.++++++|.+.....
T Consensus 144 ~~~~~------------~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 144 IPCED------------NSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp CSSCT------------TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCC------------CCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 88643 679999987554332 2334578888887754443
No 78
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.36 E-value=2.4e-12 Score=112.38 Aligned_cols=107 Identities=19% Similarity=0.182 Sum_probs=79.4
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchh
Q 023482 127 SEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHML 206 (281)
Q Consensus 127 ~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~ 206 (281)
+..++.+++.+.+.++.+|||||||+|.++..+++.+++|+|+|+|+.|++.|+++.... ++.+|+.+++.... .
T Consensus 31 ~~~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~~----~v~~~~~~~~~~~~-~ 105 (261)
T 3iv6_A 31 PSDRENDIFLENIVPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALADR----CVTIDLLDITAEIP-K 105 (261)
T ss_dssp CCHHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSSS----CCEEEECCTTSCCC-G
T ss_pred HHHHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhc----cceeeeeecccccc-c
Confidence 456778888888889999999999999999999999999999999999999999998753 34555555443000 0
Q ss_pred hHHHhhcCCCCccEEEEcCCCcc-cHH----H---HHHhccCCCCcc
Q 023482 207 SLFERRKSSSGFAKVVANIPFNI-STD----V---IKQLLPMGDIFS 245 (281)
Q Consensus 207 d~v~~~~~~~~~d~Vi~n~P~~~-~~~----~---~~~ll~~~~~~~ 245 (281)
...+.||+|+++..++. ..+ . +.+++ +||.+.
T Consensus 106 ------~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~ 145 (261)
T 3iv6_A 106 ------ELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVR 145 (261)
T ss_dssp ------GGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEE
T ss_pred ------ccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEE
Confidence 11368999999876643 221 2 23566 777764
No 79
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.36 E-value=3.6e-12 Score=107.67 Aligned_cols=103 Identities=17% Similarity=0.201 Sum_probs=79.7
Q ss_pred HHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhH
Q 023482 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSL 208 (281)
Q Consensus 130 ~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~ 208 (281)
.+.+.+.+. ++.+|||+|||+|.++..++..+.+++|+|+++.+++.|+++.... .+++++++|+.++++.
T Consensus 29 ~~~l~~~~~--~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~------ 100 (227)
T 1ve3_A 29 EPLLMKYMK--KRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFE------ 100 (227)
T ss_dssp HHHHHHSCC--SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSC------
T ss_pred HHHHHHhcC--CCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCC------
Confidence 344444443 4779999999999999999998889999999999999999987654 4899999999987643
Q ss_pred HHhhcCCCCccEEEEcCC--CcccH------HHHHHhccCCCCcce
Q 023482 209 FERRKSSSGFAKVVANIP--FNIST------DVIKQLLPMGDIFSE 246 (281)
Q Consensus 209 v~~~~~~~~~d~Vi~n~P--~~~~~------~~~~~ll~~~~~~~~ 246 (281)
.+.||+|+++.+ +.... ..+.++++++|.+..
T Consensus 101 ------~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~ 140 (227)
T 1ve3_A 101 ------DKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIM 140 (227)
T ss_dssp ------TTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ------CCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 367999999988 54432 223467777776633
No 80
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.36 E-value=3.6e-12 Score=105.38 Aligned_cols=102 Identities=16% Similarity=0.145 Sum_probs=80.3
Q ss_pred HHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEcCccccccccchhhHH
Q 023482 132 QLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLSLF 209 (281)
Q Consensus 132 ~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~gD~~~~~~~d~~~d~v 209 (281)
.+++.+...++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.|+++.... .+++++++|+.++++
T Consensus 23 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-------- 94 (199)
T 2xvm_A 23 EVLEAVKVVKPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-------- 94 (199)
T ss_dssp HHHHHTTTSCSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC--------
T ss_pred HHHHHhhccCCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC--------
Confidence 4455566667789999999999999999999889999999999999999887543 379999999998764
Q ss_pred HhhcCCCCccEEEEcCCCcccH--------HHHHHhccCCCCcce
Q 023482 210 ERRKSSSGFAKVVANIPFNIST--------DVIKQLLPMGDIFSE 246 (281)
Q Consensus 210 ~~~~~~~~~d~Vi~n~P~~~~~--------~~~~~ll~~~~~~~~ 246 (281)
.+.||+|+++..++... ..+.++++++|.+-.
T Consensus 95 -----~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~ 134 (199)
T 2xvm_A 95 -----DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLI 134 (199)
T ss_dssp -----CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred -----CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 26799999987665332 223467777776533
No 81
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.36 E-value=4.1e-12 Score=109.76 Aligned_cols=107 Identities=21% Similarity=0.340 Sum_probs=87.8
Q ss_pred CCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCccc
Q 023482 125 LNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVK 198 (281)
Q Consensus 125 ~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~ 198 (281)
..+.....++..+.+.++.+|||+|||+|.++..++.. +.+|+++|+++.+++.|++++...+ +++++++|+.+
T Consensus 77 ~~~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 156 (255)
T 3mb5_A 77 VHPKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYE 156 (255)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGG
T ss_pred ccHhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhh
Confidence 34566678888899889999999999999999999998 6799999999999999999986432 49999999986
Q ss_pred cccccchhhHHHhhcCCCCccEEEEcCCCcc-cHHHHHHhccCCCCc
Q 023482 199 CHIRSHMLSLFERRKSSSGFAKVVANIPFNI-STDVIKQLLPMGDIF 244 (281)
Q Consensus 199 ~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~-~~~~~~~ll~~~~~~ 244 (281)
. + ....||+|++|+|..+ .-..+.++++++|.+
T Consensus 157 ~-~------------~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l 190 (255)
T 3mb5_A 157 G-I------------EEENVDHVILDLPQPERVVEHAAKALKPGGFF 190 (255)
T ss_dssp C-C------------CCCSEEEEEECSSCGGGGHHHHHHHEEEEEEE
T ss_pred c-c------------CCCCcCEEEECCCCHHHHHHHHHHHcCCCCEE
Confidence 4 2 2357999999988653 445566788887765
No 82
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.36 E-value=2.4e-12 Score=107.25 Aligned_cols=90 Identities=18% Similarity=0.280 Sum_probs=72.6
Q ss_pred CCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCCccEE
Q 023482 142 GDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKV 221 (281)
Q Consensus 142 ~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~V 221 (281)
+.+|||+|||+|.++..++..+.+|+|+|+++.+++.|+++.. +++++++|+.++++. .+.||+|
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~---~~~~~~~d~~~~~~~------------~~~fD~v 106 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQTHP---SVTFHHGTITDLSDS------------PKRWAGL 106 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHHCT---TSEEECCCGGGGGGS------------CCCEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhCC---CCeEEeCcccccccC------------CCCeEEE
Confidence 6799999999999999999998899999999999999998854 899999999998753 3789999
Q ss_pred EEcCCCccc-----HHH---HHHhccCCCCcce
Q 023482 222 VANIPFNIS-----TDV---IKQLLPMGDIFSE 246 (281)
Q Consensus 222 i~n~P~~~~-----~~~---~~~ll~~~~~~~~ 246 (281)
+++..++.. ..+ +.++++++|.+..
T Consensus 107 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i 139 (203)
T 3h2b_A 107 LAWYSLIHMGPGELPDALVALRMAVEDGGGLLM 139 (203)
T ss_dssp EEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEE
T ss_pred EehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 997544332 222 3467777776543
No 83
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.36 E-value=3.3e-12 Score=112.51 Aligned_cols=110 Identities=15% Similarity=0.226 Sum_probs=87.3
Q ss_pred ccCCHHHHHHHHHHh-cCCCCCEEEEEcCCccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCCC-CeEEEEcCcc
Q 023482 123 YMLNSEINDQLAAAA-AVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFV 197 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l-~~~~~~~VLDiGcG~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~~-~v~~~~gD~~ 197 (281)
++..+.+...+++.+ ...++.+|||||||+|.++..+++. +.+|+|+|+++.+++.|+++....+ +++++++|+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~ 82 (284)
T 3gu3_A 3 LYYNDDYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDAT 82 (284)
T ss_dssp TTCCHHHHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTT
T ss_pred cccchHHHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchh
Confidence 344567777777766 5567889999999999999999987 5799999999999999999987665 8999999999
Q ss_pred ccccccchhhHHHhhcCCCCccEEEEcCCCcccH------HHHHHhccCCCCcc
Q 023482 198 KCHIRSHMLSLFERRKSSSGFAKVVANIPFNIST------DVIKQLLPMGDIFS 245 (281)
Q Consensus 198 ~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~------~~~~~ll~~~~~~~ 245 (281)
++++. ++||+|+++..++... ..+.++++++|.+.
T Consensus 83 ~~~~~-------------~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~ 123 (284)
T 3gu3_A 83 EIELN-------------DKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKII 123 (284)
T ss_dssp TCCCS-------------SCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEE
T ss_pred hcCcC-------------CCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEE
Confidence 87642 5799999986654332 23346778887764
No 84
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.36 E-value=8.7e-13 Score=111.15 Aligned_cols=104 Identities=18% Similarity=0.276 Sum_probs=83.2
Q ss_pred HHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEcCccccccccc
Q 023482 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG---ATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSH 204 (281)
Q Consensus 130 ~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~---~~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~gD~~~~~~~d~ 204 (281)
...+++.+.+.++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|+++.... .+++++++|+.++++.+
T Consensus 26 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~- 104 (219)
T 3dh0_A 26 PEKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPD- 104 (219)
T ss_dssp HHHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCS-
T ss_pred HHHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCC-
Confidence 3567777788888999999999999999999875 69999999999999999987643 38999999999887543
Q ss_pred hhhHHHhhcCCCCccEEEEcCCCccc---H---HHHHHhccCCCCcc
Q 023482 205 MLSLFERRKSSSGFAKVVANIPFNIS---T---DVIKQLLPMGDIFS 245 (281)
Q Consensus 205 ~~d~v~~~~~~~~~d~Vi~n~P~~~~---~---~~~~~ll~~~~~~~ 245 (281)
+.||+|+++..++.. . ..+.++++++|.+.
T Consensus 105 -----------~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~ 140 (219)
T 3dh0_A 105 -----------NTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLA 140 (219)
T ss_dssp -----------SCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEE
T ss_pred -----------CCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEE
Confidence 679999998665433 2 23347777777653
No 85
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.36 E-value=1.9e-12 Score=113.74 Aligned_cols=112 Identities=16% Similarity=0.162 Sum_probs=84.5
Q ss_pred ccccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhcCCC--CeEEEEcCc
Q 023482 121 QHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG--ATVLAIEKDQHMVGLVRERFASID--QLKVLQEDF 196 (281)
Q Consensus 121 ~~~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~--~~v~gvD~s~~~l~~a~~~~~~~~--~v~~~~gD~ 196 (281)
..|+.++...+.+.....+.++++|||+|||+|.++..++..+ .+|+|+|+++.+++.|+++...++ +++++++|+
T Consensus 99 ~~f~~~~~~~e~~~~~~~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~ 178 (272)
T 3a27_A 99 KIMWSQGNIEERKRMAFISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADN 178 (272)
T ss_dssp TSCCCGGGHHHHHHHHTSCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCG
T ss_pred hEEECCCchHHHHHHHHhcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECCh
Confidence 3344444444444444456678899999999999999999984 499999999999999999987654 899999999
Q ss_pred cccccccchhhHHHhhcCCCCccEEEEcCCCcccH--HHHHHhccCCCCcc
Q 023482 197 VKCHIRSHMLSLFERRKSSSGFAKVVANIPFNIST--DVIKQLLPMGDIFS 245 (281)
Q Consensus 197 ~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~--~~~~~ll~~~~~~~ 245 (281)
.+.+. .+.||+|+.|+|+.... ....+++++++.+-
T Consensus 179 ~~~~~-------------~~~~D~Vi~d~p~~~~~~l~~~~~~LkpgG~l~ 216 (272)
T 3a27_A 179 RDVEL-------------KDVADRVIMGYVHKTHKFLDKTFEFLKDRGVIH 216 (272)
T ss_dssp GGCCC-------------TTCEEEEEECCCSSGGGGHHHHHHHEEEEEEEE
T ss_pred HHcCc-------------cCCceEEEECCcccHHHHHHHHHHHcCCCCEEE
Confidence 88731 25799999999974322 33346677777664
No 86
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.35 E-value=3.3e-12 Score=110.44 Aligned_cols=82 Identities=18% Similarity=0.218 Sum_probs=64.6
Q ss_pred CCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCcccc---ccccchhhHHHhh
Q 023482 141 EGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKC---HIRSHMLSLFERR 212 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~~---~~~d~~~d~v~~~ 212 (281)
++.+|||+|||+|.++..++.. +.+|+|+|+++.+++.|+++...++ +++++++|+.+. ++.+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~--------- 135 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKE--------- 135 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTT---------
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhc---------
Confidence 4679999999999999999876 6899999999999999999987543 599999998762 2210
Q ss_pred cCCCCccEEEEcCCCcccH
Q 023482 213 KSSSGFAKVVANIPFNIST 231 (281)
Q Consensus 213 ~~~~~~d~Vi~n~P~~~~~ 231 (281)
.....||+|++||||....
T Consensus 136 ~~~~~fD~i~~npp~~~~~ 154 (254)
T 2h00_A 136 ESEIIYDFCMCNPPFFANQ 154 (254)
T ss_dssp CCSCCBSEEEECCCCC---
T ss_pred ccCCcccEEEECCCCccCc
Confidence 0025799999999997543
No 87
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.35 E-value=9.4e-12 Score=105.32 Aligned_cols=113 Identities=15% Similarity=0.179 Sum_probs=83.5
Q ss_pred CCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCccc
Q 023482 125 LNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVK 198 (281)
Q Consensus 125 ~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~ 198 (281)
..+.....+...+...++.+|||||||+|..+..+++. +++|+++|+++.+++.|++++...+ +++++++|+.+
T Consensus 42 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 121 (223)
T 3duw_A 42 VSPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALD 121 (223)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 34555555555545567889999999999999999997 6799999999999999999987543 69999999976
Q ss_pred cccccchhhHHHhhcCCCCccEEEEcCCCcccHHHH---HHhccCCCCc
Q 023482 199 CHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVI---KQLLPMGDIF 244 (281)
Q Consensus 199 ~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~---~~ll~~~~~~ 244 (281)
.... +.. ...+.||+|+.+.+......++ .+++++||.+
T Consensus 122 ~~~~-----~~~--~~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~l 163 (223)
T 3duw_A 122 SLQQ-----IEN--EKYEPFDFIFIDADKQNNPAYFEWALKLSRPGTVI 163 (223)
T ss_dssp HHHH-----HHH--TTCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEE
T ss_pred HHHH-----HHh--cCCCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEE
Confidence 4210 000 1125699999998765555444 4778888854
No 88
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.35 E-value=6.5e-12 Score=108.39 Aligned_cols=109 Identities=15% Similarity=0.185 Sum_probs=88.3
Q ss_pred CCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCccc
Q 023482 125 LNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVK 198 (281)
Q Consensus 125 ~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~~ 198 (281)
..+.....++..+.+.++.+|||+|||+|.++..+++. +.+|+++|+++.+++.|++++... ++++++++|+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~ 159 (258)
T 2pwy_A 80 TYPKDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEE 159 (258)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGG
T ss_pred ccchHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhh
Confidence 34556678888888889999999999999999999987 579999999999999999987543 589999999988
Q ss_pred cccccchhhHHHhhcCCCCccEEEEcCCCc-ccHHHHHHhccCCCCcc
Q 023482 199 CHIRSHMLSLFERRKSSSGFAKVVANIPFN-ISTDVIKQLLPMGDIFS 245 (281)
Q Consensus 199 ~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~-~~~~~~~~ll~~~~~~~ 245 (281)
.++. .+.||+|++++|-. ..-..+.+++++++.+.
T Consensus 160 ~~~~------------~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~ 195 (258)
T 2pwy_A 160 AELE------------EAAYDGVALDLMEPWKVLEKAALALKPDRFLV 195 (258)
T ss_dssp CCCC------------TTCEEEEEEESSCGGGGHHHHHHHEEEEEEEE
T ss_pred cCCC------------CCCcCEEEECCcCHHHHHHHHHHhCCCCCEEE
Confidence 7543 25799999998754 33455567777777653
No 89
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.34 E-value=5e-12 Score=107.93 Aligned_cols=112 Identities=14% Similarity=0.177 Sum_probs=88.4
Q ss_pred ccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCcc
Q 023482 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFV 197 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~ 197 (281)
++..+.....+...+...++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|++++...+ +++++++|+.
T Consensus 36 ~~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 115 (233)
T 2gpy_A 36 PIMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDAL 115 (233)
T ss_dssp CCCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGG
T ss_pred CCcCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHH
Confidence 5677888888888877778889999999999999999987 6799999999999999999986543 7999999998
Q ss_pred cc-ccccchhhHHHhhcCCCCccEEEEcCCCcccHHHHH---HhccCCCCc
Q 023482 198 KC-HIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIK---QLLPMGDIF 244 (281)
Q Consensus 198 ~~-~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~~---~ll~~~~~~ 244 (281)
+. +.. ...+.||+|+++.+......++. ++++++|.+
T Consensus 116 ~~~~~~----------~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~l 156 (233)
T 2gpy_A 116 QLGEKL----------ELYPLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLI 156 (233)
T ss_dssp GSHHHH----------TTSCCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEE
T ss_pred HHHHhc----------ccCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEE
Confidence 74 211 11367999999988755554444 556666654
No 90
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.34 E-value=1.6e-12 Score=111.74 Aligned_cols=106 Identities=19% Similarity=0.163 Sum_probs=78.6
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCCC-CeEEEEcCccccccccch
Q 023482 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHIRSHM 205 (281)
Q Consensus 128 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~~~~~~-~v~~~~gD~~~~~~~d~~ 205 (281)
.+.+.+.+.+. .+|.+|||||||+|.++..+++. +.+|++||+|+.+++.|+++....+ +++++.+|+.++...
T Consensus 48 ~~m~~~a~~~~-~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~--- 123 (236)
T 3orh_A 48 PYMHALAAAAS-SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPT--- 123 (236)
T ss_dssp HHHHHHHHHHT-TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGG---
T ss_pred HHHHHHHHhhc-cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhccc---
Confidence 34444444443 46789999999999999999887 4689999999999999999987665 889999998775321
Q ss_pred hhHHHhhcCCCCccEEEEcCCCc------cc-----HHHHHHhccCCCCc
Q 023482 206 LSLFERRKSSSGFAKVVANIPFN------IS-----TDVIKQLLPMGDIF 244 (281)
Q Consensus 206 ~d~v~~~~~~~~~d~Vi~n~P~~------~~-----~~~~~~ll~~~~~~ 244 (281)
...+.||.|+.+.... .. ...+.++|++||.|
T Consensus 124 -------~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l 166 (236)
T 3orh_A 124 -------LPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVL 166 (236)
T ss_dssp -------SCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEE
T ss_pred -------ccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEE
Confidence 2346788888754321 11 13356899999876
No 91
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.34 E-value=2.2e-12 Score=116.55 Aligned_cols=114 Identities=18% Similarity=0.146 Sum_probs=83.8
Q ss_pred ccCCHHHHHHHHHHhc-CCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCC----CeEEEEcCcc
Q 023482 123 YMLNSEINDQLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID----QLKVLQEDFV 197 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l~-~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~----~v~~~~gD~~ 197 (281)
|........++.+.+. ..++.+|||+|||+|.++..++..+++|++||+|+.+++.|+++...++ +++++++|+.
T Consensus 134 f~dq~~~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~ 213 (332)
T 2igt_A 134 FPEQIVHWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM 213 (332)
T ss_dssp CGGGHHHHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH
T ss_pred chHHHHHHHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHH
Confidence 3334445555666654 4467799999999999999999988899999999999999999986443 4999999998
Q ss_pred ccccccchhhHHHhhcCCCCccEEEEcCCCcc-c------------HHHH---HHhccCCCCc
Q 023482 198 KCHIRSHMLSLFERRKSSSGFAKVVANIPFNI-S------------TDVI---KQLLPMGDIF 244 (281)
Q Consensus 198 ~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~-~------------~~~~---~~ll~~~~~~ 244 (281)
++... .. .....||+||+|||+.. . ..++ .+++++++.+
T Consensus 214 ~~l~~-----~~---~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~l 268 (332)
T 2igt_A 214 KFIQR-----EE---RRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALG 268 (332)
T ss_dssp HHHHH-----HH---HHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCE
T ss_pred HHHHH-----HH---hcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEE
Confidence 75311 00 11468999999999632 1 2333 3678888874
No 92
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.34 E-value=2.5e-12 Score=109.44 Aligned_cols=110 Identities=15% Similarity=0.231 Sum_probs=90.2
Q ss_pred ccCCHHHHHHHHHHh--cCCCCCEEEEEcCCccHHHHHHHHc-C-------CEEEEEeCCHHHHHHHHHHhcC-------
Q 023482 123 YMLNSEINDQLAAAA--AVQEGDIVLEIGPGTGSLTNVLLNA-G-------ATVLAIEKDQHMVGLVRERFAS------- 185 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l--~~~~~~~VLDiGcG~G~~t~~la~~-~-------~~v~gvD~s~~~l~~a~~~~~~------- 185 (281)
.+..+.+...+++.+ .+.++.+|||||||+|+++..+++. + .+|+++|+++.+++.|+++...
T Consensus 64 ~~~~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~ 143 (227)
T 1r18_A 64 TISAPHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLD 143 (227)
T ss_dssp EECCHHHHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCChHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccC
Confidence 556788888999988 4778889999999999999999985 4 4999999999999999988754
Q ss_pred CCCeEEEEcCccccccccchhhHHHhhcCCCCccEEEEcCCCcccHHHHHHhccCCCCc
Q 023482 186 IDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIF 244 (281)
Q Consensus 186 ~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~ 244 (281)
..+++++++|+.+ ++. ..+.||+|+.+.+.......+.++++++|.+
T Consensus 144 ~~~v~~~~~d~~~-~~~-----------~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~l 190 (227)
T 1r18_A 144 SGQLLIVEGDGRK-GYP-----------PNAPYNAIHVGAAAPDTPTELINQLASGGRL 190 (227)
T ss_dssp HTSEEEEESCGGG-CCG-----------GGCSEEEEEECSCBSSCCHHHHHTEEEEEEE
T ss_pred CCceEEEECCccc-CCC-----------cCCCccEEEECCchHHHHHHHHHHhcCCCEE
Confidence 2489999999987 322 2267999999988776667777888887765
No 93
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.34 E-value=1.8e-12 Score=114.20 Aligned_cols=99 Identities=18% Similarity=0.197 Sum_probs=79.4
Q ss_pred HHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCccccccccchh
Q 023482 131 DQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG-ATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSHML 206 (281)
Q Consensus 131 ~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~-~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~~~~~d~~~ 206 (281)
.++.+.+ .+|.+|||+|||+|.+++.+|..+ ++|+++|+|+.+++.+++|++.++ +++++++|+.+++.
T Consensus 117 ~ri~~~~--~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~----- 189 (278)
T 3k6r_A 117 VRMAKVA--KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG----- 189 (278)
T ss_dssp HHHHHHC--CTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-----
T ss_pred HHHHHhc--CCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc-----
Confidence 3444444 478999999999999999999986 599999999999999999988664 79999999988742
Q ss_pred hHHHhhcCCCCccEEEEcCCCccc--HHHHHHhccCCCCc
Q 023482 207 SLFERRKSSSGFAKVVANIPFNIS--TDVIKQLLPMGDIF 244 (281)
Q Consensus 207 d~v~~~~~~~~~d~Vi~n~P~~~~--~~~~~~ll~~~~~~ 244 (281)
.+.||.|+.|+|+... -+...+++++||.+
T Consensus 190 --------~~~~D~Vi~~~p~~~~~~l~~a~~~lk~gG~i 221 (278)
T 3k6r_A 190 --------ENIADRILMGYVVRTHEFIPKALSIAKDGAII 221 (278)
T ss_dssp --------CSCEEEEEECCCSSGGGGHHHHHHHEEEEEEE
T ss_pred --------ccCCCEEEECCCCcHHHHHHHHHHHcCCCCEE
Confidence 3679999999887533 23445777777754
No 94
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.34 E-value=1.9e-12 Score=108.29 Aligned_cols=76 Identities=22% Similarity=0.321 Sum_probs=66.7
Q ss_pred CCCCEEEEEcCCccHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCCc
Q 023482 140 QEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGF 218 (281)
Q Consensus 140 ~~~~~VLDiGcG~G~~t~~la~~~~-~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~ 218 (281)
.++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.|+++....++++++++|+.++++. .+.|
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~------------~~~f 108 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFP------------SASF 108 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSC------------SSCE
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCC------------CCcc
Confidence 4678999999999999999999876 89999999999999999987656899999999988643 3679
Q ss_pred cEEEEcCCC
Q 023482 219 AKVVANIPF 227 (281)
Q Consensus 219 d~Vi~n~P~ 227 (281)
|+|+++.++
T Consensus 109 D~v~~~~~~ 117 (215)
T 2pxx_A 109 DVVLEKGTL 117 (215)
T ss_dssp EEEEEESHH
T ss_pred cEEEECcch
Confidence 999998765
No 95
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.34 E-value=6.4e-12 Score=107.79 Aligned_cols=101 Identities=13% Similarity=0.143 Sum_probs=80.9
Q ss_pred HhcCCCCCEEEEEcCCccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhh
Q 023482 136 AAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERR 212 (281)
Q Consensus 136 ~l~~~~~~~VLDiGcG~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~ 212 (281)
.+.+++|.+|||+|||+|+++..+++. .++|+|+|++++|++.++++..+.+|+..+.+|..+.....
T Consensus 72 ~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~--------- 142 (233)
T 4df3_A 72 ELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYR--------- 142 (233)
T ss_dssp CCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGT---------
T ss_pred hcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccc---------
Confidence 356789999999999999999999987 36999999999999999999887789999999987643211
Q ss_pred cCCCCccEEEEcCCCcccHHH----HHHhccCCCCcc
Q 023482 213 KSSSGFAKVVANIPFNISTDV----IKQLLPMGDIFS 245 (281)
Q Consensus 213 ~~~~~~d~Vi~n~P~~~~~~~----~~~ll~~~~~~~ 245 (281)
...+.+|+|+.+.++...... +.++++++|.+.
T Consensus 143 ~~~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lv 179 (233)
T 4df3_A 143 HLVEGVDGLYADVAQPEQAAIVVRNARFFLRDGGYML 179 (233)
T ss_dssp TTCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEE
T ss_pred cccceEEEEEEeccCChhHHHHHHHHHHhccCCCEEE
Confidence 223678999999887765432 247788888763
No 96
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.34 E-value=5.1e-12 Score=110.85 Aligned_cols=89 Identities=21% Similarity=0.401 Sum_probs=72.9
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCCC--CeEEEEcCcccccccc
Q 023482 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASID--QLKVLQEDFVKCHIRS 203 (281)
Q Consensus 128 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~~--~v~~~~gD~~~~~~~d 203 (281)
.+++.+++.+. .++.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.|+++....+ +++++++|+.+..
T Consensus 97 ~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~--- 172 (276)
T 2b3t_A 97 CLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL--- 172 (276)
T ss_dssp HHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG---
T ss_pred HHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhc---
Confidence 35666666665 56779999999999999999976 6799999999999999999986443 7999999997631
Q ss_pred chhhHHHhhcCCCCccEEEEcCCCccc
Q 023482 204 HMLSLFERRKSSSGFAKVVANIPFNIS 230 (281)
Q Consensus 204 ~~~d~v~~~~~~~~~d~Vi~n~P~~~~ 230 (281)
..+.||+|++||||...
T Consensus 173 ----------~~~~fD~Iv~npPy~~~ 189 (276)
T 2b3t_A 173 ----------AGQQFAMIVSNPPYIDE 189 (276)
T ss_dssp ----------TTCCEEEEEECCCCBCT
T ss_pred ----------ccCCccEEEECCCCCCc
Confidence 13679999999999653
No 97
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.34 E-value=1.1e-11 Score=105.58 Aligned_cols=110 Identities=15% Similarity=0.196 Sum_probs=79.7
Q ss_pred CCHHHHHH---HHHHhcCCCCCEEEEEcCCccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCC----CCeEEEEc
Q 023482 125 LNSEINDQ---LAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASI----DQLKVLQE 194 (281)
Q Consensus 125 ~~~~~~~~---l~~~l~~~~~~~VLDiGcG~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~----~~v~~~~g 194 (281)
..+..... ++...+..++.+|||||||+|+.+..+++. +++|+++|+++.+++.|++++... ++++++++
T Consensus 37 i~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~g 116 (221)
T 3dr5_A 37 PDEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLS 116 (221)
T ss_dssp CCHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECS
T ss_pred CCHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEc
Confidence 34444333 333333334459999999999999999985 579999999999999999998753 37999999
Q ss_pred CccccccccchhhHHHhhcCCCCccEEEEcCCCcccHHHH---HHhccCCCCc
Q 023482 195 DFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVI---KQLLPMGDIF 244 (281)
Q Consensus 195 D~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~---~~ll~~~~~~ 244 (281)
|+.+.... ...+.||+||.+.+.......+ .+++++||.+
T Consensus 117 da~~~l~~----------~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~l 159 (221)
T 3dr5_A 117 RPLDVMSR----------LANDSYQLVFGQVSPMDLKALVDAAWPLLRRGGAL 159 (221)
T ss_dssp CHHHHGGG----------SCTTCEEEEEECCCTTTHHHHHHHHHHHEEEEEEE
T ss_pred CHHHHHHH----------hcCCCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEE
Confidence 99875311 1237899999987765544444 4677777654
No 98
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.34 E-value=4.2e-12 Score=111.61 Aligned_cols=100 Identities=18% Similarity=0.247 Sum_probs=79.8
Q ss_pred HhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCC-CeEEEEcCccccccccchhhHHHhhcC
Q 023482 136 AAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHIRSHMLSLFERRKS 214 (281)
Q Consensus 136 ~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~-~v~~~~gD~~~~~~~d~~~d~v~~~~~ 214 (281)
.+...++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.|+++....+ +++++++|+.+.++
T Consensus 115 ~~~~~~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~------------- 181 (286)
T 3m70_A 115 AAKIISPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI------------- 181 (286)
T ss_dssp HHHHSCSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-------------
T ss_pred HhhccCCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-------------
Confidence 3333467899999999999999999998999999999999999999987665 89999999998764
Q ss_pred CCCccEEEEcCCCcccH-----HH---HHHhccCCCCcceEE
Q 023482 215 SSGFAKVVANIPFNIST-----DV---IKQLLPMGDIFSEVV 248 (281)
Q Consensus 215 ~~~~d~Vi~n~P~~~~~-----~~---~~~ll~~~~~~~~~~ 248 (281)
.+.||+|+++.+++... .+ +.++++++|.+-...
T Consensus 182 ~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 182 QENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp CSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 37899999988765331 22 346677777654333
No 99
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.34 E-value=4.6e-12 Score=109.60 Aligned_cols=109 Identities=15% Similarity=0.192 Sum_probs=83.0
Q ss_pred CHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCcccc
Q 023482 126 NSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKC 199 (281)
Q Consensus 126 ~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~~~ 199 (281)
.+.....+...+...++.+|||||||+|..+..+++. +.+|+++|+++.+++.|++++... ++++++++|+.+.
T Consensus 48 ~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~ 127 (248)
T 3tfw_A 48 AANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQS 127 (248)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH
T ss_pred CHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH
Confidence 3444444444445557889999999999999999987 679999999999999999998754 3799999999773
Q ss_pred -ccccchhhHHHhhcCCCCccEEEEcCCCcccHHHH---HHhccCCCCc
Q 023482 200 -HIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVI---KQLLPMGDIF 244 (281)
Q Consensus 200 -~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~---~~ll~~~~~~ 244 (281)
+.. ...+.||+|+.+.+.....+.+ .+++++||.+
T Consensus 128 l~~~----------~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~l 166 (248)
T 3tfw_A 128 LESL----------GECPAFDLIFIDADKPNNPHYLRWALRYSRPGTLI 166 (248)
T ss_dssp HHTC----------CSCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEE
T ss_pred HHhc----------CCCCCeEEEEECCchHHHHHHHHHHHHhcCCCeEE
Confidence 211 1234899999988765544444 4788888865
No 100
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.33 E-value=4.9e-12 Score=106.98 Aligned_cols=97 Identities=13% Similarity=0.153 Sum_probs=74.6
Q ss_pred CCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 141 EGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
++.+|||||||+|.++..+++. +.+|+|||+++.+++.|+++.... .|++++++|+.+++. . ...+
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~------~----~~~~ 107 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTD------V----FEPG 107 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHH------H----CCTT
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHh------h----cCcC
Confidence 5679999999999999999987 679999999999999999987654 489999999988541 0 1235
Q ss_pred CccEEEEcCCCcc--------------cHHHHHHhccCCCCcceE
Q 023482 217 GFAKVVANIPFNI--------------STDVIKQLLPMGDIFSEV 247 (281)
Q Consensus 217 ~~d~Vi~n~P~~~--------------~~~~~~~ll~~~~~~~~~ 247 (281)
.+|.|+.+.|-.+ .-..+.++++++|.+...
T Consensus 108 ~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~ 152 (213)
T 2fca_A 108 EVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK 152 (213)
T ss_dssp SCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred CcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEE
Confidence 7899988754321 123345788888876433
No 101
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.33 E-value=4.7e-12 Score=108.08 Aligned_cols=100 Identities=14% Similarity=0.152 Sum_probs=77.9
Q ss_pred HHHhcCCCCCEEEEEcCCccHHHHHHHHc-C-CEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccc----cccccchhh
Q 023482 134 AAAAAVQEGDIVLEIGPGTGSLTNVLLNA-G-ATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVK----CHIRSHMLS 207 (281)
Q Consensus 134 ~~~l~~~~~~~VLDiGcG~G~~t~~la~~-~-~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~----~~~~d~~~d 207 (281)
++.+.+.++.+|||+|||+|.++..+++. + .+|+|+|+++.+++.|+++.....++.++.+|+.+ .++
T Consensus 67 l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~------ 140 (230)
T 1fbn_A 67 LKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANI------ 140 (230)
T ss_dssp CCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTT------
T ss_pred ccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCccccccc------
Confidence 34445567889999999999999999988 4 79999999999999999988766799999999987 332
Q ss_pred HHHhhcCCCCccEEEEcCCCccc----HHHHHHhccCCCCcce
Q 023482 208 LFERRKSSSGFAKVVANIPFNIS----TDVIKQLLPMGDIFSE 246 (281)
Q Consensus 208 ~v~~~~~~~~~d~Vi~n~P~~~~----~~~~~~ll~~~~~~~~ 246 (281)
. ..||+|+.+++.... -..+.++++++|.+..
T Consensus 141 ------~-~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 176 (230)
T 1fbn_A 141 ------V-EKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMI 176 (230)
T ss_dssp ------S-CCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEE
T ss_pred ------C-ccEEEEEEecCChhHHHHHHHHHHHhCCCCcEEEE
Confidence 2 579999988664311 2334567788876543
No 102
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.33 E-value=2.2e-11 Score=106.99 Aligned_cols=107 Identities=16% Similarity=0.216 Sum_probs=84.4
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCccccccccc
Q 023482 129 INDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRSH 204 (281)
Q Consensus 129 ~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~~~~~~d~ 204 (281)
....+++.+.+.++.+|||||||+|.++..+++. +.+|+|+|+++.+++.|+++.... ++++++.+|+.+++
T Consensus 52 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---- 127 (287)
T 1kpg_A 52 KIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---- 127 (287)
T ss_dssp HHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC----
T ss_pred HHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC----
Confidence 4566777777788899999999999999999954 789999999999999999988754 38999999997653
Q ss_pred hhhHHHhhcCCCCccEEEEcCCCccc-----H---HHHHHhccCCCCcceEEEe
Q 023482 205 MLSLFERRKSSSGFAKVVANIPFNIS-----T---DVIKQLLPMGDIFSEVVLL 250 (281)
Q Consensus 205 ~~d~v~~~~~~~~~d~Vi~n~P~~~~-----~---~~~~~ll~~~~~~~~~~~~ 250 (281)
+.||+|+++..++.. . ..+.++++++|.+......
T Consensus 128 -----------~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 170 (287)
T 1kpg_A 128 -----------EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTIT 170 (287)
T ss_dssp -----------CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred -----------CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 578999987544322 2 3335788999887554444
No 103
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.33 E-value=1e-11 Score=109.09 Aligned_cols=106 Identities=14% Similarity=0.200 Sum_probs=81.6
Q ss_pred HHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCccccccccchhh
Q 023482 131 DQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRSHMLS 207 (281)
Q Consensus 131 ~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~~~~~~d~~~d 207 (281)
..++..+... +.+|||||||+|.++..++..+.+|+|+|+++.+++.|+++.... ++++++++|+.+++.
T Consensus 59 ~~~l~~~~~~-~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------ 131 (285)
T 4htf_A 59 DRVLAEMGPQ-KLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVAS------ 131 (285)
T ss_dssp HHHHHHTCSS-CCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGG------
T ss_pred HHHHHhcCCC-CCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhh------
Confidence 3455555543 679999999999999999999999999999999999999998765 379999999998862
Q ss_pred HHHhhcCCCCccEEEEcCCCcccH------HHHHHhccCCCCcceEE
Q 023482 208 LFERRKSSSGFAKVVANIPFNIST------DVIKQLLPMGDIFSEVV 248 (281)
Q Consensus 208 ~v~~~~~~~~~d~Vi~n~P~~~~~------~~~~~ll~~~~~~~~~~ 248 (281)
...+.||+|+++..++... ..+.++++++|.+....
T Consensus 132 -----~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 132 -----HLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMF 173 (285)
T ss_dssp -----GCSSCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred -----hcCCCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEE
Confidence 1237899999986654332 33457888888764443
No 104
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.32 E-value=2.1e-11 Score=108.79 Aligned_cols=108 Identities=16% Similarity=0.194 Sum_probs=86.1
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCcccccccc
Q 023482 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRS 203 (281)
Q Consensus 128 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~~~~~d 203 (281)
.....+++.+.+.++.+|||||||+|.++..+++. +.+|+|+|+++.+++.|+++....+ +++++++|+.+++
T Consensus 77 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--- 153 (318)
T 2fk8_A 77 AKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA--- 153 (318)
T ss_dssp HHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---
T ss_pred HHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---
Confidence 45566777777788899999999999999999988 8899999999999999999987543 6999999998763
Q ss_pred chhhHHHhhcCCCCccEEEEcCCCccc-----H---HHHHHhccCCCCcceEEEe
Q 023482 204 HMLSLFERRKSSSGFAKVVANIPFNIS-----T---DVIKQLLPMGDIFSEVVLL 250 (281)
Q Consensus 204 ~~~d~v~~~~~~~~~d~Vi~n~P~~~~-----~---~~~~~ll~~~~~~~~~~~~ 250 (281)
+.||+|+++..++.. . ..+.++++++|.+......
T Consensus 154 ------------~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 196 (318)
T 2fk8_A 154 ------------EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSV 196 (318)
T ss_dssp ------------CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred ------------CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 579999998555333 2 2335788899887554443
No 105
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.32 E-value=4.8e-12 Score=107.32 Aligned_cols=115 Identities=13% Similarity=0.139 Sum_probs=84.9
Q ss_pred ccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCc
Q 023482 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASID---QLKVLQEDF 196 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~ 196 (281)
....+.....+...+...++.+|||||||+|.++..+++. +++|+++|+++.+++.|++++...+ +++++++|+
T Consensus 40 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 119 (221)
T 3u81_A 40 MNVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGAS 119 (221)
T ss_dssp GGCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCH
Confidence 4556666666666666667889999999999999999984 6799999999999999999886543 699999998
Q ss_pred ccc-ccccchhhHHHhhcCCCCccEEEEcCCCcccHH---HHH--HhccCCCCc
Q 023482 197 VKC-HIRSHMLSLFERRKSSSGFAKVVANIPFNISTD---VIK--QLLPMGDIF 244 (281)
Q Consensus 197 ~~~-~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~---~~~--~ll~~~~~~ 244 (281)
.+. +..... ...+.||+|+.+.+.....+ .+. +++++|+.+
T Consensus 120 ~~~l~~~~~~-------~~~~~fD~V~~d~~~~~~~~~~~~~~~~~~LkpgG~l 166 (221)
T 3u81_A 120 QDLIPQLKKK-------YDVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVL 166 (221)
T ss_dssp HHHGGGTTTT-------SCCCCCSEEEECSCGGGHHHHHHHHHHTTCCCTTCEE
T ss_pred HHHHHHHHHh-------cCCCceEEEEEcCCcccchHHHHHHHhccccCCCeEE
Confidence 763 211000 01257999999886655443 233 677888765
No 106
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.32 E-value=5e-12 Score=107.52 Aligned_cols=98 Identities=23% Similarity=0.311 Sum_probs=75.3
Q ss_pred CCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEcCcccc-ccccchhhHHHhhcCC
Q 023482 141 EGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKC-HIRSHMLSLFERRKSS 215 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~gD~~~~-~~~d~~~d~v~~~~~~ 215 (281)
++.+|||||||+|.++..+++. +.+|+|||+++.+++.|+++.... .|++++++|+.++ +.. ...
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~----------~~~ 103 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKM----------IPD 103 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHH----------SCT
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHH----------cCC
Confidence 5679999999999999999987 468999999999999999987654 3899999999874 200 134
Q ss_pred CCccEEEEc--CCCcc------------cHHHHHHhccCCCCcceEE
Q 023482 216 SGFAKVVAN--IPFNI------------STDVIKQLLPMGDIFSEVV 248 (281)
Q Consensus 216 ~~~d~Vi~n--~P~~~------------~~~~~~~ll~~~~~~~~~~ 248 (281)
+.+|.|+.+ .|+.. .-..+.+++++||.+....
T Consensus 104 ~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 104 NSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp TCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 789999998 45432 2233457788888764443
No 107
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.32 E-value=8.7e-12 Score=107.03 Aligned_cols=110 Identities=13% Similarity=0.101 Sum_probs=79.7
Q ss_pred HHHHHHHHHhc---CCCCCEEEEEcCCccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCcccccc
Q 023482 128 EINDQLAAAAA---VQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHI 201 (281)
Q Consensus 128 ~~~~~l~~~l~---~~~~~~VLDiGcG~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~ 201 (281)
.....++..+. +.++.+|||+|||+|..+..+++. .++|+|+|+++.|++.+.+......|+.++++|+.....
T Consensus 60 kla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~ 139 (232)
T 3id6_C 60 KLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQS 139 (232)
T ss_dssp HHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGG
T ss_pred HHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchh
Confidence 44555655554 778999999999999999999986 459999999999876554443333589999999986432
Q ss_pred ccchhhHHHhhcCCCCccEEEEcCCCcccHHHH----HHhccCCCCcce
Q 023482 202 RSHMLSLFERRKSSSGFAKVVANIPFNISTDVI----KQLLPMGDIFSE 246 (281)
Q Consensus 202 ~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~----~~ll~~~~~~~~ 246 (281)
.. ...+.||+|++|.+......++ .++|++||.+..
T Consensus 140 ~~---------~~~~~~D~I~~d~a~~~~~~il~~~~~~~LkpGG~lvi 179 (232)
T 3id6_C 140 YK---------SVVENVDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLL 179 (232)
T ss_dssp TT---------TTCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEE
T ss_pred hh---------ccccceEEEEecCCChhHHHHHHHHHHHhCCCCeEEEE
Confidence 11 1135799999998875444333 348888887643
No 108
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.32 E-value=2.5e-12 Score=111.73 Aligned_cols=95 Identities=19% Similarity=0.289 Sum_probs=75.9
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCC-CeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 139 VQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 139 ~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~-~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
..++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.|+++...++ .++++++|+.+. + ..+.
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~-~------------~~~~ 184 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA-L------------PFGP 184 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH-G------------GGCC
T ss_pred cCCCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc-C------------cCCC
Confidence 4577899999999999999999988899999999999999999987554 389999998763 1 1267
Q ss_pred ccEEEEcCCCcccHHHH---HHhccCCCCcce
Q 023482 218 FAKVVANIPFNISTDVI---KQLLPMGDIFSE 246 (281)
Q Consensus 218 ~d~Vi~n~P~~~~~~~~---~~ll~~~~~~~~ 246 (281)
||+|++|.+.+....++ .++++++|.+..
T Consensus 185 fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lil 216 (254)
T 2nxc_A 185 FDLLVANLYAELHAALAPRYREALVPGGRALL 216 (254)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCEEEECCcHHHHHHHHHHHHHHcCCCCEEEE
Confidence 99999998776544433 466777776644
No 109
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.32 E-value=1.9e-12 Score=113.59 Aligned_cols=102 Identities=25% Similarity=0.384 Sum_probs=82.8
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhH
Q 023482 129 INDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSL 208 (281)
Q Consensus 129 ~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~ 208 (281)
+...+++.+...++.+|||||||+|.++..+++.+.+|+|+|+++.|++.|+++. .+++++++|+.++++
T Consensus 45 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~---~~~~~~~~d~~~~~~------- 114 (279)
T 3ccf_A 45 YGEDLLQLLNPQPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNY---PHLHFDVADARNFRV------- 114 (279)
T ss_dssp SCCHHHHHHCCCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---TTSCEEECCTTTCCC-------
T ss_pred HHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhC---CCCEEEECChhhCCc-------
Confidence 3445667777778889999999999999999998889999999999999999876 478999999998764
Q ss_pred HHhhcCCCCccEEEEcCCCcccH------HHHHHhccCCCCcce
Q 023482 209 FERRKSSSGFAKVVANIPFNIST------DVIKQLLPMGDIFSE 246 (281)
Q Consensus 209 v~~~~~~~~~d~Vi~n~P~~~~~------~~~~~ll~~~~~~~~ 246 (281)
.+.||+|+++..+++.. ..+.+++++||.+..
T Consensus 115 ------~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~ 152 (279)
T 3ccf_A 115 ------DKPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVA 152 (279)
T ss_dssp ------SSCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEE
T ss_pred ------CCCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEE
Confidence 26799999987765422 334577888887643
No 110
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.32 E-value=2.9e-12 Score=110.66 Aligned_cols=110 Identities=19% Similarity=0.206 Sum_probs=78.1
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc----CCEEEEEeCCHHHHHHHHHHhcCC---C---C----------
Q 023482 129 INDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA----GATVLAIEKDQHMVGLVRERFASI---D---Q---------- 188 (281)
Q Consensus 129 ~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~----~~~v~gvD~s~~~l~~a~~~~~~~---~---~---------- 188 (281)
++..+++.+...++.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.|+++.... + +
T Consensus 39 l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (250)
T 1o9g_A 39 IFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSER 118 (250)
T ss_dssp HHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhh
Confidence 4444454444445679999999999999999886 569999999999999999887654 2 2
Q ss_pred ---------------eE-------------EEEcCccccccccchhhHHHhhcCCCCccEEEEcCCCcccH---------
Q 023482 189 ---------------LK-------------VLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNIST--------- 231 (281)
Q Consensus 189 ---------------v~-------------~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~--------- 231 (281)
++ ++++|+.+..... .. .....||+|++|+||....
T Consensus 119 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~----~~---~~~~~fD~Iv~npp~~~~~~~~~~~~~~ 191 (250)
T 1o9g_A 119 FGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALS----AV---LAGSAPDVVLTDLPYGERTHWEGQVPGQ 191 (250)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHH----HH---HTTCCCSEEEEECCGGGSSSSSSCCCHH
T ss_pred cccccchhhhhhhhhhhhhccccccccccceeecccccccccc----cc---cCCCCceEEEeCCCeecccccccccccc
Confidence 66 9999987732100 00 0234799999999985422
Q ss_pred ---HH---HHHhccCCCCcc
Q 023482 232 ---DV---IKQLLPMGDIFS 245 (281)
Q Consensus 232 ---~~---~~~ll~~~~~~~ 245 (281)
.+ +.++++++|.+.
T Consensus 192 ~~~~~l~~~~~~LkpgG~l~ 211 (250)
T 1o9g_A 192 PVAGLLRSLASALPAHAVIA 211 (250)
T ss_dssp HHHHHHHHHHHHSCTTCEEE
T ss_pred HHHHHHHHHHHhcCCCcEEE
Confidence 22 346778888654
No 111
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.32 E-value=8e-12 Score=107.45 Aligned_cols=108 Identities=19% Similarity=0.162 Sum_probs=84.6
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchh
Q 023482 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHML 206 (281)
Q Consensus 128 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~ 206 (281)
.....+++.+...++.+|||||||+|.++..++.. ..+|+|+|+++.+++.|+++.....+++++++|+.++++.
T Consensus 80 ~~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~---- 155 (254)
T 1xtp_A 80 EGSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLP---- 155 (254)
T ss_dssp HHHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCC----
T ss_pred HHHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCC----
Confidence 34566777776667889999999999999999887 4589999999999999999987656899999999988753
Q ss_pred hHHHhhcCCCCccEEEEcCCCcccH--------HHHHHhccCCCCcceE
Q 023482 207 SLFERRKSSSGFAKVVANIPFNIST--------DVIKQLLPMGDIFSEV 247 (281)
Q Consensus 207 d~v~~~~~~~~~d~Vi~n~P~~~~~--------~~~~~ll~~~~~~~~~ 247 (281)
.+.||+|+++..++... ..+.++++++|.+...
T Consensus 156 --------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 196 (254)
T 1xtp_A 156 --------PNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFK 196 (254)
T ss_dssp --------SSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --------CCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 26799999987654431 2234677777766433
No 112
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.32 E-value=5.6e-12 Score=114.23 Aligned_cols=103 Identities=17% Similarity=0.335 Sum_probs=80.4
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCccccccccc
Q 023482 129 INDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRSH 204 (281)
Q Consensus 129 ~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~-~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~~~~~~d~ 204 (281)
+.+.+.+.+...++.+|||||||+|.++..+++.++ +|+|+|+++ +++.|+++...+ ++++++++|+.+++++
T Consensus 52 ~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~-- 128 (340)
T 2fyt_A 52 YRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLP-- 128 (340)
T ss_dssp HHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCS--
T ss_pred HHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCC--
Confidence 345566666667888999999999999999999865 999999996 999999887654 4899999999988753
Q ss_pred hhhHHHhhcCCCCccEEEEcC-CCccc-----HHHH---HHhccCCCCc
Q 023482 205 MLSLFERRKSSSGFAKVVANI-PFNIS-----TDVI---KQLLPMGDIF 244 (281)
Q Consensus 205 ~~d~v~~~~~~~~~d~Vi~n~-P~~~~-----~~~~---~~ll~~~~~~ 244 (281)
.++||+|+++. +|... ..++ .++++++|.+
T Consensus 129 ----------~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~l 167 (340)
T 2fyt_A 129 ----------VEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSV 167 (340)
T ss_dssp ----------CSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEE
T ss_pred ----------CCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEE
Confidence 26799999986 44321 1222 4788888866
No 113
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.32 E-value=2.4e-12 Score=119.27 Aligned_cols=94 Identities=21% Similarity=0.299 Sum_probs=75.5
Q ss_pred CCCcccCccccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCCCCeE
Q 023482 114 FPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASIDQLK 190 (281)
Q Consensus 114 ~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~~~v~ 190 (281)
..+...|+ |++++.+++.+++.+...++.+|||+|||+|.++..+++. +.+++|+|+++.+++.| .+++
T Consensus 13 ~~~~~~g~-~~TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-------~~~~ 84 (421)
T 2ih2_A 13 SAPRSLGR-VETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-------PWAE 84 (421)
T ss_dssp ---------CCCCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-------TTEE
T ss_pred hhcccCce-EeCCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-------CCCc
Confidence 34455666 8999999999999998666779999999999999999985 46999999999999877 4789
Q ss_pred EEEcCccccccccchhhHHHhhcCCCCccEEEEcCCCc
Q 023482 191 VLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFN 228 (281)
Q Consensus 191 ~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~ 228 (281)
++++|+.+.+. .+.||+|++||||.
T Consensus 85 ~~~~D~~~~~~-------------~~~fD~Ii~NPPy~ 109 (421)
T 2ih2_A 85 GILADFLLWEP-------------GEAFDLILGNPPYG 109 (421)
T ss_dssp EEESCGGGCCC-------------SSCEEEEEECCCCC
T ss_pred EEeCChhhcCc-------------cCCCCEEEECcCcc
Confidence 99999987642 26799999999995
No 114
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.32 E-value=4.3e-12 Score=116.24 Aligned_cols=115 Identities=12% Similarity=0.043 Sum_probs=80.1
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCC--CeEEEEcCccccccc--
Q 023482 127 SEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID--QLKVLQEDFVKCHIR-- 202 (281)
Q Consensus 127 ~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~--~v~~~~gD~~~~~~~-- 202 (281)
..+...+++.+... +.+|||+|||+|.+++.++....+|+|+|+++.+++.|++|...++ +++++++|+.++...
T Consensus 200 ~~l~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~ 278 (369)
T 3bt7_A 200 IQMLEWALDVTKGS-KGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMN 278 (369)
T ss_dssp HHHHHHHHHHTTTC-CSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHS
T ss_pred HHHHHHHHHHhhcC-CCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHh
Confidence 34555666666554 5789999999999999999877899999999999999999987654 899999999875210
Q ss_pred cc-hhhHHHhh-cCCCCccEEEEcCCCccc-HHHHHHhccCCCC
Q 023482 203 SH-MLSLFERR-KSSSGFAKVVANIPFNIS-TDVIKQLLPMGDI 243 (281)
Q Consensus 203 d~-~~d~v~~~-~~~~~~d~Vi~n~P~~~~-~~~~~~ll~~~~~ 243 (281)
+. .|+.+... .....||+|+.|||+... ..+++.+. +++.
T Consensus 279 ~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g~~~~~~~~l~-~~g~ 321 (369)
T 3bt7_A 279 GVREFNRLQGIDLKSYQCETIFVDPPRSGLDSETEKMVQ-AYPR 321 (369)
T ss_dssp SCCCCTTGGGSCGGGCCEEEEEECCCTTCCCHHHHHHHT-TSSE
T ss_pred hccccccccccccccCCCCEEEECcCccccHHHHHHHHh-CCCE
Confidence 00 00000000 001379999999999644 44555554 4443
No 115
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.32 E-value=8.7e-12 Score=109.18 Aligned_cols=110 Identities=21% Similarity=0.350 Sum_probs=89.0
Q ss_pred cCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCC-----CCeEEEEcC
Q 023482 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASI-----DQLKVLQED 195 (281)
Q Consensus 124 ~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~-----~~v~~~~gD 195 (281)
...+.....++..+.+.++.+|||+|||+|.++..++.. +.+|+++|+++.+++.|++++... .+++++++|
T Consensus 82 ~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d 161 (280)
T 1i9g_A 82 VIYPKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSD 161 (280)
T ss_dssp CCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSC
T ss_pred eecHHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECc
Confidence 345667788888888889999999999999999999986 579999999999999999987543 489999999
Q ss_pred ccccccccchhhHHHhhcCCCCccEEEEcCCCc-ccHHHHHHhccCCCCcc
Q 023482 196 FVKCHIRSHMLSLFERRKSSSGFAKVVANIPFN-ISTDVIKQLLPMGDIFS 245 (281)
Q Consensus 196 ~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~-~~~~~~~~ll~~~~~~~ 245 (281)
+.+.++. .+.||+|++++|-. ..-..+.+++++++.+.
T Consensus 162 ~~~~~~~------------~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~ 200 (280)
T 1i9g_A 162 LADSELP------------DGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLM 200 (280)
T ss_dssp GGGCCCC------------TTCEEEEEEESSCGGGGHHHHHHHEEEEEEEE
T ss_pred hHhcCCC------------CCceeEEEECCcCHHHHHHHHHHhCCCCCEEE
Confidence 9987643 36799999998753 33345567777777653
No 116
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.32 E-value=7.1e-12 Score=107.86 Aligned_cols=103 Identities=21% Similarity=0.326 Sum_probs=78.4
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCC-CeEEEEcCccccccccchhh
Q 023482 129 INDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHIRSHMLS 207 (281)
Q Consensus 129 ~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~-~v~~~~gD~~~~~~~d~~~d 207 (281)
++..++......++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|+++....+ +++++++|+.++++.
T Consensus 29 ~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~----- 103 (252)
T 1wzn_A 29 FVEEIFKEDAKREVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK----- 103 (252)
T ss_dssp HHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-----
T ss_pred HHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccC-----
Confidence 34455555555677899999999999999999999999999999999999999886544 899999999987642
Q ss_pred HHHhhcCCCCccEEEEc---CCCcccH------HHHHHhccCCCCc
Q 023482 208 LFERRKSSSGFAKVVAN---IPFNIST------DVIKQLLPMGDIF 244 (281)
Q Consensus 208 ~v~~~~~~~~~d~Vi~n---~P~~~~~------~~~~~ll~~~~~~ 244 (281)
+.||+|++. .++.... ..+.++++++|.+
T Consensus 104 --------~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l 141 (252)
T 1wzn_A 104 --------NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVF 141 (252)
T ss_dssp --------SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEE
T ss_pred --------CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEE
Confidence 579999964 2332111 2234667777765
No 117
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.32 E-value=3.8e-12 Score=109.79 Aligned_cols=105 Identities=17% Similarity=0.231 Sum_probs=84.0
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccc
Q 023482 127 SEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSH 204 (281)
Q Consensus 127 ~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~ 204 (281)
......+++.+...++.+|||||||+|.++..++.. +.+|+|+|+++.+++.++++. .+++++++|+.+++ .+
T Consensus 19 ~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~---~~~~~~~~d~~~~~-~~- 93 (259)
T 2p35_A 19 TRPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL---PNTNFGKADLATWK-PA- 93 (259)
T ss_dssp GHHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS---TTSEEEECCTTTCC-CS-
T ss_pred HHHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC---CCcEEEECChhhcC-cc-
Confidence 345567777777778889999999999999999988 789999999999999999883 48999999999876 32
Q ss_pred hhhHHHhhcCCCCccEEEEcCCCcccH---HH---HHHhccCCCCcceE
Q 023482 205 MLSLFERRKSSSGFAKVVANIPFNIST---DV---IKQLLPMGDIFSEV 247 (281)
Q Consensus 205 ~~d~v~~~~~~~~~d~Vi~n~P~~~~~---~~---~~~ll~~~~~~~~~ 247 (281)
+.||+|+++..+++.. .+ +.++++++|.+...
T Consensus 94 -----------~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 131 (259)
T 2p35_A 94 -----------QKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQ 131 (259)
T ss_dssp -----------SCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEE
T ss_pred -----------CCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEE
Confidence 6799999988776543 22 24667777766433
No 118
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.32 E-value=5.6e-12 Score=106.55 Aligned_cols=101 Identities=14% Similarity=0.062 Sum_probs=73.7
Q ss_pred cCCCCCEEEEEcCCccHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCC
Q 023482 138 AVQEGDIVLEIGPGTGSLTNVLLNAG--ATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 138 ~~~~~~~VLDiGcG~G~~t~~la~~~--~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
.+.++.+|||+|||+|..+..+++.. .+|+|+|+|+.|++.+.+......++.++.+|+.+..... ...
T Consensus 54 ~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~---------~~~ 124 (210)
T 1nt2_A 54 KLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYS---------GIV 124 (210)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTT---------TTC
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhc---------ccc
Confidence 45678899999999999999999873 6999999999988766555444458999999987641100 112
Q ss_pred CCccEEEEcCCCcccH----HHHHHhccCCCCcceE
Q 023482 216 SGFAKVVANIPFNIST----DVIKQLLPMGDIFSEV 247 (281)
Q Consensus 216 ~~~d~Vi~n~P~~~~~----~~~~~ll~~~~~~~~~ 247 (281)
+.||+|+++.+..... ..+.+++++||.+...
T Consensus 125 ~~fD~V~~~~~~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 125 EKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp CCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cceeEEEEeccChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 6799999997554332 3346788888876443
No 119
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.31 E-value=2.6e-11 Score=103.95 Aligned_cols=110 Identities=16% Similarity=0.226 Sum_probs=89.1
Q ss_pred CCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCcccccc
Q 023482 125 LNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHI 201 (281)
Q Consensus 125 ~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~~~~~ 201 (281)
..+.....++..+.+.++.+|||+|||+|.++..+++.+.+|+++|+++.+++.|+++.... .+++++.+|+.+..+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 154 (248)
T 2yvl_A 75 IYPKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEV 154 (248)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCC
T ss_pred ccchhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhccc
Confidence 34566678888888888999999999999999999988789999999999999999987643 489999999987531
Q ss_pred ccchhhHHHhhcCCCCccEEEEcCCCc-ccHHHHHHhccCCCCcce
Q 023482 202 RSHMLSLFERRKSSSGFAKVVANIPFN-ISTDVIKQLLPMGDIFSE 246 (281)
Q Consensus 202 ~d~~~d~v~~~~~~~~~d~Vi~n~P~~-~~~~~~~~ll~~~~~~~~ 246 (281)
....||+|++++|-. ..-..+.++++++|.+..
T Consensus 155 ------------~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~ 188 (248)
T 2yvl_A 155 ------------PEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGF 188 (248)
T ss_dssp ------------CTTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEE
T ss_pred ------------CCCcccEEEECCcCHHHHHHHHHHHcCCCCEEEE
Confidence 235799999998854 444556788888887633
No 120
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.31 E-value=1.1e-11 Score=105.88 Aligned_cols=101 Identities=20% Similarity=0.281 Sum_probs=80.4
Q ss_pred HHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHH
Q 023482 132 QLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFE 210 (281)
Q Consensus 132 ~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~-~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~ 210 (281)
.+...+...++.+|||||||+|.++..+++.+. +|+|+|+++.+++.|+++... .+++++++|+.++++.
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~d~~~~~~~-------- 104 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD-TGITYERADLDKLHLP-------- 104 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS-SSEEEEECCGGGCCCC--------
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc-CCceEEEcChhhccCC--------
Confidence 455666666788999999999999999999887 999999999999999988764 3799999999987743
Q ss_pred hhcCCCCccEEEEcCCCcccH------HHHHHhccCCCCcc
Q 023482 211 RRKSSSGFAKVVANIPFNIST------DVIKQLLPMGDIFS 245 (281)
Q Consensus 211 ~~~~~~~~d~Vi~n~P~~~~~------~~~~~ll~~~~~~~ 245 (281)
.+.||+|+++..++... ..+.++++++|.+-
T Consensus 105 ----~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~ 141 (243)
T 3bkw_A 105 ----QDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFV 141 (243)
T ss_dssp ----TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEE
T ss_pred ----CCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEE
Confidence 36799999987654432 23346777777653
No 121
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.31 E-value=3.9e-12 Score=107.75 Aligned_cols=113 Identities=14% Similarity=0.133 Sum_probs=83.5
Q ss_pred ccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCc
Q 023482 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASID---QLKVLQEDF 196 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~ 196 (281)
+...+.....+...+...++.+|||||||+|..+..++.. +.+|+++|+++.+++.|++++...+ +++++++|+
T Consensus 46 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 125 (225)
T 3tr6_A 46 MQTAPEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPA 125 (225)
T ss_dssp GSCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCH
Confidence 3445555555555555557789999999999999999987 6799999999999999999986543 699999999
Q ss_pred cccccccchhhHHHhhcC---CCCccEEEEcCCCcccHHHH---HHhccCCCCc
Q 023482 197 VKCHIRSHMLSLFERRKS---SSGFAKVVANIPFNISTDVI---KQLLPMGDIF 244 (281)
Q Consensus 197 ~~~~~~d~~~d~v~~~~~---~~~~d~Vi~n~P~~~~~~~~---~~ll~~~~~~ 244 (281)
.+.... . .. .+.||+|+.+.+......++ .+++++||.+
T Consensus 126 ~~~~~~------~---~~~~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~l 170 (225)
T 3tr6_A 126 KDTLAE------L---IHAGQAWQYDLIYIDADKANTDLYYEESLKLLREGGLI 170 (225)
T ss_dssp HHHHHH------H---HTTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEE
T ss_pred HHHHHH------h---hhccCCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEE
Confidence 764210 0 11 16899999988755444333 4677777765
No 122
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.30 E-value=4.3e-12 Score=108.31 Aligned_cols=101 Identities=14% Similarity=0.169 Sum_probs=77.6
Q ss_pred HHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCccccccccchh
Q 023482 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRSHML 206 (281)
Q Consensus 130 ~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~~~~~~d~~~ 206 (281)
...++......+ .+|||||||+|.++..++..+.+|+|+|+++.+++.|+++.... .+++++++|+.+++.
T Consensus 56 l~~~~~~~~~~~-~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----- 129 (235)
T 3lcc_A 56 IVHLVDTSSLPL-GRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP----- 129 (235)
T ss_dssp HHHHHHTTCSCC-EEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC-----
T ss_pred HHHHHHhcCCCC-CCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC-----
Confidence 334444444433 49999999999999999988889999999999999999998754 379999999998752
Q ss_pred hHHHhhcCCCCccEEEEcCCCcccH--------HHHHHhccCCCCc
Q 023482 207 SLFERRKSSSGFAKVVANIPFNIST--------DVIKQLLPMGDIF 244 (281)
Q Consensus 207 d~v~~~~~~~~~d~Vi~n~P~~~~~--------~~~~~ll~~~~~~ 244 (281)
.+.||+|+++..++... ..+.++++++|.+
T Consensus 130 --------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l 167 (235)
T 3lcc_A 130 --------TELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGEL 167 (235)
T ss_dssp --------SSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEE
T ss_pred --------CCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEE
Confidence 25899999976554322 3334777877765
No 123
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.30 E-value=4.9e-12 Score=112.07 Aligned_cols=109 Identities=25% Similarity=0.348 Sum_probs=83.8
Q ss_pred CHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-----CCeEEEEcCccccc
Q 023482 126 NSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI-----DQLKVLQEDFVKCH 200 (281)
Q Consensus 126 ~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-----~~v~~~~gD~~~~~ 200 (281)
.......+++.+...++ +|||||||+|.++..+++.+.+|+|+|+++.+++.|+++.... .+++++++|+.+++
T Consensus 68 ~~~~~~~~~~~~~~~~~-~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~ 146 (299)
T 3g2m_A 68 GTSEAREFATRTGPVSG-PVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFA 146 (299)
T ss_dssp CHHHHHHHHHHHCCCCS-CEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCC
T ss_pred ccHHHHHHHHhhCCCCC-cEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCC
Confidence 45667777787775444 8999999999999999999899999999999999999998765 47999999999987
Q ss_pred cccchhhHHHhhcCCCCccEEEEc-CCCcc-c----H---HHHHHhccCCCCcceEE
Q 023482 201 IRSHMLSLFERRKSSSGFAKVVAN-IPFNI-S----T---DVIKQLLPMGDIFSEVV 248 (281)
Q Consensus 201 ~~d~~~d~v~~~~~~~~~d~Vi~n-~P~~~-~----~---~~~~~ll~~~~~~~~~~ 248 (281)
+ .+.||+|+.. ..++. . . ..+.++++++|.+....
T Consensus 147 ~-------------~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 147 L-------------DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp C-------------SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c-------------CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 4 2679988853 22222 2 1 33357778888764433
No 124
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.30 E-value=1e-11 Score=106.00 Aligned_cols=105 Identities=18% Similarity=0.207 Sum_probs=81.6
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhh
Q 023482 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLS 207 (281)
Q Consensus 128 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d 207 (281)
.+...+...+. ++.+|||||||+|.++..+++.+.+|+|+|+++.+++.++++.. ..+++++++|+.+++++
T Consensus 42 ~~~~~l~~~~~--~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~d~~~~~~~----- 113 (242)
T 3l8d_A 42 TIIPFFEQYVK--KEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERGE-GPDLSFIKGDLSSLPFE----- 113 (242)
T ss_dssp THHHHHHHHSC--TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTTC-BTTEEEEECBTTBCSSC-----
T ss_pred HHHHHHHHHcC--CCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhcc-cCCceEEEcchhcCCCC-----
Confidence 35555555554 67899999999999999999999999999999999999998752 35899999999998753
Q ss_pred HHHhhcCCCCccEEEEcCCCcccH------HHHHHhccCCCCcceE
Q 023482 208 LFERRKSSSGFAKVVANIPFNIST------DVIKQLLPMGDIFSEV 247 (281)
Q Consensus 208 ~v~~~~~~~~~d~Vi~n~P~~~~~------~~~~~ll~~~~~~~~~ 247 (281)
.+.||+|+++..++... ..+.++++++|.+...
T Consensus 114 -------~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 152 (242)
T 3l8d_A 114 -------NEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIA 152 (242)
T ss_dssp -------TTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred -------CCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEE
Confidence 36899999976554322 2335777887765433
No 125
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.30 E-value=9.7e-12 Score=108.39 Aligned_cols=108 Identities=24% Similarity=0.270 Sum_probs=83.6
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc-C--CEEEEEeCCHH------HHHHHHHHhcCC---CCeEEEEcC
Q 023482 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-G--ATVLAIEKDQH------MVGLVRERFASI---DQLKVLQED 195 (281)
Q Consensus 128 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~-~--~~v~gvD~s~~------~l~~a~~~~~~~---~~v~~~~gD 195 (281)
.....+++.+.+.++.+|||||||+|.++..+++. + .+|+|+|+++. +++.|++++... ++++++++|
T Consensus 30 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d 109 (275)
T 3bkx_A 30 AHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNT 109 (275)
T ss_dssp HHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSC
T ss_pred HHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECC
Confidence 34566777888888999999999999999999987 4 79999999997 999999998755 379999998
Q ss_pred ---ccccccccchhhHHHhhcCCCCccEEEEcCCCccc------HHHHHHhccCCCCcceE
Q 023482 196 ---FVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNIS------TDVIKQLLPMGDIFSEV 247 (281)
Q Consensus 196 ---~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~------~~~~~~ll~~~~~~~~~ 247 (281)
...+++ ..+.||+|+++..++.. ...++.+++++|.+...
T Consensus 110 ~~~~~~~~~------------~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~ 158 (275)
T 3bkx_A 110 NLSDDLGPI------------ADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVA 158 (275)
T ss_dssp CTTTCCGGG------------TTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEE
T ss_pred hhhhccCCC------------CCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEE
Confidence 333433 23689999998776433 24446777777766443
No 126
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.30 E-value=1.1e-11 Score=105.26 Aligned_cols=101 Identities=13% Similarity=0.136 Sum_probs=78.2
Q ss_pred cCCCCCEEEEEcCCccHHHHHHHHc-C--CEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcC
Q 023482 138 AVQEGDIVLEIGPGTGSLTNVLLNA-G--ATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (281)
Q Consensus 138 ~~~~~~~VLDiGcG~G~~t~~la~~-~--~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~ 214 (281)
.+.++.+|||+|||+|.++..+++. + .+|+|+|+++.+++.++++.....+++++++|+.+..... ..
T Consensus 70 ~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~---------~~ 140 (227)
T 1g8a_A 70 PIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYR---------AL 140 (227)
T ss_dssp CCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGT---------TT
T ss_pred CCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhh---------cc
Confidence 3667889999999999999999986 3 6999999999999999998877679999999998743110 11
Q ss_pred CCCccEEEEcCCCcccH----HHHHHhccCCCCcceE
Q 023482 215 SSGFAKVVANIPFNIST----DVIKQLLPMGDIFSEV 247 (281)
Q Consensus 215 ~~~~d~Vi~n~P~~~~~----~~~~~ll~~~~~~~~~ 247 (281)
.+.||+|++++|..... ..+.++++++|.+-..
T Consensus 141 ~~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 141 VPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 25799999998854332 2345788888876433
No 127
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.30 E-value=7.6e-12 Score=109.24 Aligned_cols=105 Identities=21% Similarity=0.290 Sum_probs=81.8
Q ss_pred HHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEcCccccccccch
Q 023482 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHM 205 (281)
Q Consensus 130 ~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~gD~~~~~~~d~~ 205 (281)
...+.......++.+|||||||+|.++..+++. +.+|+|+|+++.+++.|+++.... .+++++.+|+.++++.
T Consensus 26 ~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~--- 102 (276)
T 3mgg_A 26 EKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFE--- 102 (276)
T ss_dssp HHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSC---
T ss_pred HHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCC---
Confidence 333444444567889999999999999999988 679999999999999999988654 3899999999998754
Q ss_pred hhHHHhhcCCCCccEEEEcCCCcccH------HHHHHhccCCCCcce
Q 023482 206 LSLFERRKSSSGFAKVVANIPFNIST------DVIKQLLPMGDIFSE 246 (281)
Q Consensus 206 ~d~v~~~~~~~~~d~Vi~n~P~~~~~------~~~~~ll~~~~~~~~ 246 (281)
.+.||+|+++..++... ..+.++++++|.+..
T Consensus 103 ---------~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~ 140 (276)
T 3mgg_A 103 ---------DSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITV 140 (276)
T ss_dssp ---------TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEE
T ss_pred ---------CCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEE
Confidence 36899999986654332 234577888877643
No 128
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.30 E-value=1.8e-11 Score=113.00 Aligned_cols=94 Identities=12% Similarity=0.180 Sum_probs=80.1
Q ss_pred ccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcC---------------------------------------
Q 023482 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG--------------------------------------- 163 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~--------------------------------------- 163 (281)
-...+.++..++......++..|||++||+|.+++.++..+
T Consensus 183 Apl~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~ 262 (393)
T 3k0b_A 183 APIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQ 262 (393)
T ss_dssp CSCCHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTC
T ss_pred CCCcHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccC
Confidence 34567788889999888888899999999999998888652
Q ss_pred -CEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCccccccccchhhHHHhhcCCCCccEEEEcCCCcc
Q 023482 164 -ATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNI 229 (281)
Q Consensus 164 -~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~ 229 (281)
.+|+|+|+|+.+++.|+.|...++ +++++++|+.+++. ...||+||+||||..
T Consensus 263 ~~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~-------------~~~fD~Iv~NPPYg~ 319 (393)
T 3k0b_A 263 PLNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-------------EDEYGVVVANPPYGE 319 (393)
T ss_dssp CCCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCC-------------CCCSCEEEECCCCCC
T ss_pred CceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCC-------------CCCCCEEEECCCCcc
Confidence 359999999999999999987654 69999999999763 257999999999964
No 129
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.29 E-value=1.2e-11 Score=111.68 Aligned_cols=111 Identities=20% Similarity=0.298 Sum_probs=86.5
Q ss_pred CCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc-C--CEEEEEeCCHHHHHHHHHHhcC-------------CCC
Q 023482 125 LNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-G--ATVLAIEKDQHMVGLVRERFAS-------------IDQ 188 (281)
Q Consensus 125 ~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~-~--~~v~gvD~s~~~l~~a~~~~~~-------------~~~ 188 (281)
..+.....++..+.+.++.+|||+|||+|.++..++.. + .+|+|+|+++.+++.|+++... ..+
T Consensus 89 ~~~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~ 168 (336)
T 2b25_A 89 TFPKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDN 168 (336)
T ss_dssp CCHHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCC
T ss_pred cCHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCc
Confidence 55667788888888889999999999999999999987 4 7999999999999999998763 248
Q ss_pred eEEEEcCccccccccchhhHHHhhcCCCCccEEEEcCCCcc-cHHHHHHhccCCCCcc
Q 023482 189 LKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNI-STDVIKQLLPMGDIFS 245 (281)
Q Consensus 189 v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~-~~~~~~~ll~~~~~~~ 245 (281)
++++++|+.+.... ...+.||+|++++|-.+ ..+.+.++++++|.+.
T Consensus 169 v~~~~~d~~~~~~~----------~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv 216 (336)
T 2b25_A 169 VDFIHKDISGATED----------IKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCA 216 (336)
T ss_dssp EEEEESCTTCCC-----------------EEEEEECSSSTTTTHHHHGGGEEEEEEEE
T ss_pred eEEEECChHHcccc----------cCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEE
Confidence 99999999886311 12256999999876543 3456677888887763
No 130
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.29 E-value=1.6e-11 Score=103.05 Aligned_cols=107 Identities=15% Similarity=0.194 Sum_probs=78.3
Q ss_pred CCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCccc
Q 023482 125 LNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVK 198 (281)
Q Consensus 125 ~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~ 198 (281)
..+.....+...+...++.+|||||||+|..+..++.. +.+|+++|+++.+++.|++++...+ +++++++|+.+
T Consensus 40 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 119 (210)
T 3c3p_A 40 VDRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLG 119 (210)
T ss_dssp CCHHHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHH
Confidence 44444444333333346789999999999999999987 5799999999999999999876443 69999999976
Q ss_pred c-ccccchhhHHHhhcCCCCccEEEEcCCCcccHHHH---HHhccCCCCc
Q 023482 199 C-HIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVI---KQLLPMGDIF 244 (281)
Q Consensus 199 ~-~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~---~~ll~~~~~~ 244 (281)
. +. ..+ ||+|+.+.+......++ .++++++|.+
T Consensus 120 ~~~~------------~~~-fD~v~~~~~~~~~~~~l~~~~~~LkpgG~l 156 (210)
T 3c3p_A 120 IAAG------------QRD-IDILFMDCDVFNGADVLERMNRCLAKNALL 156 (210)
T ss_dssp HHTT------------CCS-EEEEEEETTTSCHHHHHHHHGGGEEEEEEE
T ss_pred Hhcc------------CCC-CCEEEEcCChhhhHHHHHHHHHhcCCCeEE
Confidence 4 21 125 99999987655444444 3566776654
No 131
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.29 E-value=1.3e-11 Score=106.86 Aligned_cols=116 Identities=11% Similarity=0.117 Sum_probs=84.2
Q ss_pred ccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCc
Q 023482 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASID---QLKVLQEDF 196 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~ 196 (281)
....+.....+...+...++.+|||||||+|+.+..++.. +.+|+++|+++.+++.|++++...+ +++++++|+
T Consensus 61 ~~~~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda 140 (247)
T 1sui_A 61 MTTSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPA 140 (247)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred CCcCHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCH
Confidence 4455655555555555556789999999999999999986 6799999999999999999987543 799999999
Q ss_pred ccc-ccccchhhHHHhhcCCCCccEEEEcCCCcccHH---HHHHhccCCCCc
Q 023482 197 VKC-HIRSHMLSLFERRKSSSGFAKVVANIPFNISTD---VIKQLLPMGDIF 244 (281)
Q Consensus 197 ~~~-~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~---~~~~ll~~~~~~ 244 (281)
.+. +.. ...-...+.||+|+.+.+...... .+.+++++||.+
T Consensus 141 ~~~l~~l------~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~l 186 (247)
T 1sui_A 141 LPVLDEM------IKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVI 186 (247)
T ss_dssp HHHHHHH------HHSGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCE
T ss_pred HHHHHHH------HhccCCCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEE
Confidence 764 210 000001368999999876443333 345788888876
No 132
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.29 E-value=4.6e-12 Score=111.59 Aligned_cols=108 Identities=17% Similarity=0.236 Sum_probs=82.1
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC------CCeEEEEcCccccc
Q 023482 127 SEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI------DQLKVLQEDFVKCH 200 (281)
Q Consensus 127 ~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~------~~v~~~~gD~~~~~ 200 (281)
..+...+...+...++.+|||||||+|..+..++..+.+|+|+|+|+.+++.|+++.... .++.+..+|+.+++
T Consensus 43 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~ 122 (293)
T 3thr_A 43 AEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLD 122 (293)
T ss_dssp HHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHH
T ss_pred HHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCc
Confidence 455666777776667889999999999999999999899999999999999998876221 27899999998876
Q ss_pred ---cccchhhHHHhhcCCCCccEEEEc-CCCccc----------H---HHHHHhccCCCCcce
Q 023482 201 ---IRSHMLSLFERRKSSSGFAKVVAN-IPFNIS----------T---DVIKQLLPMGDIFSE 246 (281)
Q Consensus 201 ---~~d~~~d~v~~~~~~~~~d~Vi~n-~P~~~~----------~---~~~~~ll~~~~~~~~ 246 (281)
+. .+.||+|+++ ..++.. . ..+.+++++||.+..
T Consensus 123 ~~~~~------------~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (293)
T 3thr_A 123 KDVPA------------GDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI 173 (293)
T ss_dssp HHSCC------------TTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred ccccc------------CCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 32 3679999986 333221 1 233477788877643
No 133
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.29 E-value=1.4e-11 Score=113.32 Aligned_cols=93 Identities=12% Similarity=0.159 Sum_probs=79.4
Q ss_pred cCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcC----------------------------------------
Q 023482 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG---------------------------------------- 163 (281)
Q Consensus 124 ~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~---------------------------------------- 163 (281)
...+.++..|+......++..|||++||+|.+++.++..+
T Consensus 177 pl~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 256 (384)
T 3ldg_A 177 PIKENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQ 256 (384)
T ss_dssp CCCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred CCcHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCC
Confidence 4457788889998888888999999999999999888652
Q ss_pred CEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCccccccccchhhHHHhhcCCCCccEEEEcCCCcc
Q 023482 164 ATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNI 229 (281)
Q Consensus 164 ~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~ 229 (281)
.+|+|+|+|+.+++.|++|....+ +++++++|+.+++. .+.||+||+||||..
T Consensus 257 ~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~-------------~~~fD~Iv~NPPYG~ 312 (384)
T 3ldg_A 257 LDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKT-------------NKINGVLISNPPYGE 312 (384)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCC-------------CCCSCEEEECCCCTT
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCc-------------cCCcCEEEECCchhh
Confidence 359999999999999999987654 69999999999763 257999999999963
No 134
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.29 E-value=1.3e-11 Score=109.34 Aligned_cols=114 Identities=8% Similarity=0.005 Sum_probs=84.4
Q ss_pred CHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHH---cCCEEEEEeCCHHHHHHHHHHhcCC----CCeEEEEcCccc
Q 023482 126 NSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLN---AGATVLAIEKDQHMVGLVRERFASI----DQLKVLQEDFVK 198 (281)
Q Consensus 126 ~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~---~~~~v~gvD~s~~~l~~a~~~~~~~----~~v~~~~gD~~~ 198 (281)
++.+.+.+..... .++.+|||||||+|..+..+++ .+.+|+|+|+++.+++.|+++.... .+++++++|+.+
T Consensus 22 ~~~~~~~l~~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 100 (299)
T 3g5t_A 22 PSDFYKMIDEYHD-GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDD 100 (299)
T ss_dssp CHHHHHHHHHHCC-SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTC
T ss_pred CHHHHHHHHHHhc-CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHh
Confidence 4555666655543 4778999999999999999995 4679999999999999999987653 499999999999
Q ss_pred cccccchhhHHHhhcCCCCccEEEEcCCCcccH-----HHHHHhccCCCCcce
Q 023482 199 CHIRSHMLSLFERRKSSSGFAKVVANIPFNIST-----DVIKQLLPMGDIFSE 246 (281)
Q Consensus 199 ~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~-----~~~~~ll~~~~~~~~ 246 (281)
+++.+.. . ...+.||+|+++..+++.. ..+.+++++||.+..
T Consensus 101 ~~~~~~~--~----~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 101 FKFLGAD--S----VDKQKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CGGGCTT--T----TTSSCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEE
T ss_pred CCccccc--c----ccCCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEE
Confidence 8753200 0 1126899999987654431 233577888887643
No 135
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.28 E-value=1.2e-11 Score=108.49 Aligned_cols=104 Identities=19% Similarity=0.367 Sum_probs=78.5
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCccccccc
Q 023482 129 INDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIR 202 (281)
Q Consensus 129 ~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~~~~~~ 202 (281)
....++..+.+.++.+|||+|||+|.++..+++. +.+|+++|+++.+++.|+++.... ++++++++|+.+ ++
T Consensus 98 ~~~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~- 175 (275)
T 1yb2_A 98 DASYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FI- 175 (275)
T ss_dssp --------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CC-
T ss_pred hHHHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cC-
Confidence 3456677778888899999999999999999987 679999999999999999998765 489999999987 32
Q ss_pred cchhhHHHhhcCCCCccEEEEcCCCc-ccHHHHHHhccCCCCcc
Q 023482 203 SHMLSLFERRKSSSGFAKVVANIPFN-ISTDVIKQLLPMGDIFS 245 (281)
Q Consensus 203 d~~~d~v~~~~~~~~~d~Vi~n~P~~-~~~~~~~~ll~~~~~~~ 245 (281)
..+.||+|++++|-. ..-..+.++++++|.+.
T Consensus 176 -----------~~~~fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~ 208 (275)
T 1yb2_A 176 -----------SDQMYDAVIADIPDPWNHVQKIASMMKPGSVAT 208 (275)
T ss_dssp -----------CSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEE
T ss_pred -----------cCCCccEEEEcCcCHHHHHHHHHHHcCCCCEEE
Confidence 236799999988743 23345567777777653
No 136
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.28 E-value=9.4e-12 Score=116.70 Aligned_cols=101 Identities=18% Similarity=0.238 Sum_probs=84.1
Q ss_pred CCcccCccccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc---------------CCEEEEEeCCHHHHHHH
Q 023482 115 PRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---------------GATVLAIEKDQHMVGLV 179 (281)
Q Consensus 115 ~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~---------------~~~v~gvD~s~~~l~~a 179 (281)
.+...|+ |++++.+++.|++.+.+.++.+|||+|||+|.++..+++. ..+++|+|+++.+++.|
T Consensus 146 ~~~~~G~-fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA 224 (445)
T 2okc_A 146 KKSGAGQ-YFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLA 224 (445)
T ss_dssp TTTCCGG-GCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHH
T ss_pred ccccCCc-ccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHH
Confidence 3445566 8899999999999999888889999999999999888763 35799999999999999
Q ss_pred HHHhcCC--C--CeEEEEcCccccccccchhhHHHhhcCCCCccEEEEcCCCcc
Q 023482 180 RERFASI--D--QLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNI 229 (281)
Q Consensus 180 ~~~~~~~--~--~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~ 229 (281)
+.+.... + ++.+.++|+...+. ...||+|++||||..
T Consensus 225 ~~nl~l~g~~~~~~~i~~gD~l~~~~-------------~~~fD~Iv~NPPf~~ 265 (445)
T 2okc_A 225 SMNLYLHGIGTDRSPIVCEDSLEKEP-------------STLVDVILANPPFGT 265 (445)
T ss_dssp HHHHHHTTCCSSCCSEEECCTTTSCC-------------SSCEEEEEECCCSSC
T ss_pred HHHHHHhCCCcCCCCEeeCCCCCCcc-------------cCCcCEEEECCCCCC
Confidence 9886532 2 67899999987653 147999999999964
No 137
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.28 E-value=1.3e-11 Score=111.85 Aligned_cols=101 Identities=14% Similarity=0.152 Sum_probs=77.7
Q ss_pred CCcccCccccCCHHHHHHHHHHh----cCCCCCEEEEEcCCccHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHh
Q 023482 115 PRKSLGQHYMLNSEINDQLAAAA----AVQEGDIVLEIGPGTGSLTNVLLNAG-------ATVLAIEKDQHMVGLVRERF 183 (281)
Q Consensus 115 ~~~~~g~~~~~~~~~~~~l~~~l----~~~~~~~VLDiGcG~G~~t~~la~~~-------~~v~gvD~s~~~l~~a~~~~ 183 (281)
.....|+ +++++.+...+...+ ...++.+|||+|||+|.++..+++.. .+++|+|+++.+++.|+.+.
T Consensus 101 ~~~~~g~-~~TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~ 179 (344)
T 2f8l_A 101 HGIQVNH-QMTPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGA 179 (344)
T ss_dssp SSCCGGG-CCCCHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHH
T ss_pred cccccCc-CCChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHH
Confidence 3344566 668887766544433 34466799999999999999998762 68999999999999999987
Q ss_pred cCCC-CeEEEEcCccccccccchhhHHHhhcCCCCccEEEEcCCCcc
Q 023482 184 ASID-QLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNI 229 (281)
Q Consensus 184 ~~~~-~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~ 229 (281)
...+ ++.++++|+.... ....||+|++||||+.
T Consensus 180 ~~~g~~~~i~~~D~l~~~-------------~~~~fD~Ii~NPPfg~ 213 (344)
T 2f8l_A 180 DLQRQKMTLLHQDGLANL-------------LVDPVDVVISDLPVGY 213 (344)
T ss_dssp HHHTCCCEEEESCTTSCC-------------CCCCEEEEEEECCCSE
T ss_pred HhCCCCceEEECCCCCcc-------------ccCCccEEEECCCCCC
Confidence 5433 7899999987632 2367999999999754
No 138
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.28 E-value=1.6e-11 Score=106.49 Aligned_cols=88 Identities=16% Similarity=0.217 Sum_probs=72.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCCccE
Q 023482 141 EGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAK 220 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~ 220 (281)
++.+|||||||+|.++..+++.+.+|+|+|+++.+++.|+++.. +++++++|+.++++ .+.||+
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~---~~~~~~~d~~~~~~-------------~~~fD~ 113 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRNP---DAVLHHGDMRDFSL-------------GRRFSA 113 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHCT---TSEEEECCTTTCCC-------------SCCEEE
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhCC---CCEEEECChHHCCc-------------cCCcCE
Confidence 56799999999999999999998899999999999999999865 89999999999764 268999
Q ss_pred EEEcC-CCccc---H------HHHHHhccCCCCc
Q 023482 221 VVANI-PFNIS---T------DVIKQLLPMGDIF 244 (281)
Q Consensus 221 Vi~n~-P~~~~---~------~~~~~ll~~~~~~ 244 (281)
|+++. .++.. . ..+.++++++|.+
T Consensus 114 v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l 147 (263)
T 3pfg_A 114 VTCMFSSIGHLAGQAELDAALERFAAHVLPDGVV 147 (263)
T ss_dssp EEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEE
T ss_pred EEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEE
Confidence 99986 55443 1 2234667777655
No 139
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.27 E-value=1.3e-11 Score=113.34 Aligned_cols=102 Identities=19% Similarity=0.263 Sum_probs=79.5
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCccccccccc
Q 023482 129 INDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSH 204 (281)
Q Consensus 129 ~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~-~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~~~~~d~ 204 (281)
+.+.+.......++.+|||||||+|.++..+++.++ +|+|+|++ .+++.|+++...++ +++++++|+.+++++
T Consensus 51 ~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-- 127 (376)
T 3r0q_C 51 YFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP-- 127 (376)
T ss_dssp HHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS--
T ss_pred HHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC--
Confidence 344455555667889999999999999999999977 99999999 99999999887553 699999999988642
Q ss_pred hhhHHHhhcCCCCccEEEEcC-CCcc-----cHHH---HHHhccCCCCc
Q 023482 205 MLSLFERRKSSSGFAKVVANI-PFNI-----STDV---IKQLLPMGDIF 244 (281)
Q Consensus 205 ~~d~v~~~~~~~~~d~Vi~n~-P~~~-----~~~~---~~~ll~~~~~~ 244 (281)
+.||+|++++ +|.. ...+ +.++++++|.+
T Consensus 128 -----------~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~l 165 (376)
T 3r0q_C 128 -----------EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVM 165 (376)
T ss_dssp -----------SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEE
T ss_pred -----------CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEE
Confidence 6799999976 3332 1122 24778888766
No 140
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.27 E-value=4.2e-12 Score=110.14 Aligned_cols=96 Identities=16% Similarity=0.186 Sum_probs=74.2
Q ss_pred CCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCCC--CeEEEEcCccccccccchhhHHHhhcCC
Q 023482 140 QEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASID--QLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 140 ~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~~--~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
.++.+|||||||+|..++.++.. +.+|+++|+++.+++.|+++....+ +++++++|+.+++..+ ...
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~---------~~~ 149 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREA---------GHR 149 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTST---------TTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhccc---------ccC
Confidence 46789999999999999999986 6799999999999999999887543 7999999999876421 113
Q ss_pred CCccEEEEcCCC--cccHHHHHHhccCCCCc
Q 023482 216 SGFAKVVANIPF--NISTDVIKQLLPMGDIF 244 (281)
Q Consensus 216 ~~~d~Vi~n~P~--~~~~~~~~~ll~~~~~~ 244 (281)
+.||+|+++.-- ......+.++++++|.+
T Consensus 150 ~~fD~I~s~a~~~~~~ll~~~~~~LkpgG~l 180 (249)
T 3g89_A 150 EAYARAVARAVAPLCVLSELLLPFLEVGGAA 180 (249)
T ss_dssp TCEEEEEEESSCCHHHHHHHHGGGEEEEEEE
T ss_pred CCceEEEECCcCCHHHHHHHHHHHcCCCeEE
Confidence 679999997432 22223445777887765
No 141
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.27 E-value=2.8e-11 Score=106.13 Aligned_cols=107 Identities=21% Similarity=0.320 Sum_probs=86.5
Q ss_pred CHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCcccc
Q 023482 126 NSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKC 199 (281)
Q Consensus 126 ~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~~~ 199 (281)
.+.....++..+.+.++.+|||+|||+|.++..+++. +.+|+++|+++.+++.|+++.... ++++++++|+.+.
T Consensus 97 ~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 176 (277)
T 1o54_A 97 YPKDSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG 176 (277)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC
T ss_pred CHHHHHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc
Confidence 3445577888888889999999999999999999987 569999999999999999988654 3799999999875
Q ss_pred ccccchhhHHHhhcCCCCccEEEEcCCCc-ccHHHHHHhccCCCCcc
Q 023482 200 HIRSHMLSLFERRKSSSGFAKVVANIPFN-ISTDVIKQLLPMGDIFS 245 (281)
Q Consensus 200 ~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~-~~~~~~~~ll~~~~~~~ 245 (281)
+. .+.||+|++|+|.. ..-..+.+++++++.+.
T Consensus 177 -~~------------~~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~ 210 (277)
T 1o54_A 177 -FD------------EKDVDALFLDVPDPWNYIDKCWEALKGGGRFA 210 (277)
T ss_dssp -CS------------CCSEEEEEECCSCGGGTHHHHHHHEEEEEEEE
T ss_pred -cc------------CCccCEEEECCcCHHHHHHHHHHHcCCCCEEE
Confidence 22 25799999999875 34455567777777653
No 142
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.27 E-value=2.6e-11 Score=101.60 Aligned_cols=103 Identities=17% Similarity=0.184 Sum_probs=78.1
Q ss_pred HHHHHHHhc-CCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhH
Q 023482 130 NDQLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSL 208 (281)
Q Consensus 130 ~~~l~~~l~-~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~ 208 (281)
...+++.+. ..++.+|||||||+|.++..+++.+.+|+|+|+++.+++.|++ ....+++++++|+.++ +.
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~--~~~~~~~~~~~d~~~~-~~------ 104 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGR--HGLDNVEFRQQDLFDW-TP------ 104 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGG--GCCTTEEEEECCTTSC-CC------
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHh--cCCCCeEEEecccccC-CC------
Confidence 334455554 5567899999999999999999998999999999999999988 2235899999999887 32
Q ss_pred HHhhcCCCCccEEEEcCCCcccH--------HHHHHhccCCCCcceE
Q 023482 209 FERRKSSSGFAKVVANIPFNIST--------DVIKQLLPMGDIFSEV 247 (281)
Q Consensus 209 v~~~~~~~~~d~Vi~n~P~~~~~--------~~~~~ll~~~~~~~~~ 247 (281)
.+.||+|+++..++... ..+.++++++|.+...
T Consensus 105 ------~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 145 (218)
T 3ou2_A 105 ------DRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFV 145 (218)
T ss_dssp ------SSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------CCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 36899999976553322 2224777887776444
No 143
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.27 E-value=2.7e-11 Score=100.70 Aligned_cols=104 Identities=16% Similarity=0.180 Sum_probs=78.0
Q ss_pred HHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCC-CeEEEEcCccccccccchhhH
Q 023482 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHIRSHMLSL 208 (281)
Q Consensus 130 ~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~-~v~~~~gD~~~~~~~d~~~d~ 208 (281)
+..++..+. ++ +|||||||+|.++..+++.+.+|+|+|+++.+++.|+++....+ +++++++|+.++++.
T Consensus 21 l~~~~~~~~--~~-~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~------ 91 (202)
T 2kw5_A 21 LVSVANQIP--QG-KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIV------ 91 (202)
T ss_dssp HHHHHHHSC--SS-EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCC------
T ss_pred HHHHHHhCC--CC-CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCC------
Confidence 334444443 55 99999999999999999988899999999999999999876443 899999999988743
Q ss_pred HHhhcCCCCccEEEEcCCCccc---H---HHHHHhccCCCCcceEE
Q 023482 209 FERRKSSSGFAKVVANIPFNIS---T---DVIKQLLPMGDIFSEVV 248 (281)
Q Consensus 209 v~~~~~~~~~d~Vi~n~P~~~~---~---~~~~~ll~~~~~~~~~~ 248 (281)
.+.||+|+++..+... . ..+.++++++|.+....
T Consensus 92 ------~~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 92 ------ADAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp ------TTTCSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEE
T ss_pred ------cCCccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 2678999987543311 1 22246778887764443
No 144
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.27 E-value=1.2e-11 Score=105.54 Aligned_cols=103 Identities=15% Similarity=0.195 Sum_probs=78.2
Q ss_pred HHHHHHhc-CCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHH
Q 023482 131 DQLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLF 209 (281)
Q Consensus 131 ~~l~~~l~-~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v 209 (281)
..+++.+. ..++.+|||||||+|.++..+++.+.+|+|+|+++.+++.|+++... +++++++|+.+++ .
T Consensus 31 ~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~--~v~~~~~d~~~~~-~------- 100 (250)
T 2p7i_A 31 PFMVRAFTPFFRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLKD--GITYIHSRFEDAQ-L------- 100 (250)
T ss_dssp HHHHHHHGGGCCSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSCS--CEEEEESCGGGCC-C-------
T ss_pred HHHHHHHHhhcCCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhhC--CeEEEEccHHHcC-c-------
Confidence 44444443 34667899999999999999999888999999999999999998765 8999999998873 2
Q ss_pred HhhcCCCCccEEEEcCCCccc---H---HHHH-HhccCCCCcceEE
Q 023482 210 ERRKSSSGFAKVVANIPFNIS---T---DVIK-QLLPMGDIFSEVV 248 (281)
Q Consensus 210 ~~~~~~~~~d~Vi~n~P~~~~---~---~~~~-~ll~~~~~~~~~~ 248 (281)
.+.||+|+++..++.. . ..+. ++++++|.+....
T Consensus 101 -----~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 101 -----PRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp -----SSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred -----CCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEc
Confidence 2679999997554332 1 2335 6777877664433
No 145
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.26 E-value=1.5e-11 Score=113.34 Aligned_cols=93 Identities=13% Similarity=0.218 Sum_probs=79.0
Q ss_pred cCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcC----------------------------------------
Q 023482 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG---------------------------------------- 163 (281)
Q Consensus 124 ~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~---------------------------------------- 163 (281)
.....++..|+......++..|||++||+|.+++.++..+
T Consensus 178 pl~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 257 (385)
T 3ldu_A 178 PIRETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESK 257 (385)
T ss_dssp CCCHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCC
T ss_pred CCcHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCC
Confidence 3456788888888888888999999999999999987752
Q ss_pred CEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCccccccccchhhHHHhhcCCCCccEEEEcCCCcc
Q 023482 164 ATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNI 229 (281)
Q Consensus 164 ~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~ 229 (281)
.+|+|+|+|+.+++.|+.+...++ ++++.++|+.+++. ...||+||+||||..
T Consensus 258 ~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~-------------~~~~D~Iv~NPPyg~ 313 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKS-------------EDEFGFIITNPPYGE 313 (385)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCC-------------SCBSCEEEECCCCCC
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCc-------------CCCCcEEEECCCCcC
Confidence 469999999999999999987543 79999999998753 257999999999964
No 146
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.26 E-value=8.8e-12 Score=113.31 Aligned_cols=94 Identities=16% Similarity=0.227 Sum_probs=74.3
Q ss_pred cCCCCCEEEEEcCCccHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCccccccccchhhHHHhhc
Q 023482 138 AVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSHMLSLFERRK 213 (281)
Q Consensus 138 ~~~~~~~VLDiGcG~G~~t~~la~~~~-~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~~~~~d~~~d~v~~~~ 213 (281)
...++.+|||||||+|.++..+++.+. +|+|+|++ ++++.|+++...++ +++++++|+.+++++
T Consensus 63 ~~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~----------- 130 (349)
T 3q7e_A 63 HLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVELP----------- 130 (349)
T ss_dssp HHHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-----------
T ss_pred ccCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccCC-----------
Confidence 345788999999999999999999965 99999999 59999999887543 599999999998754
Q ss_pred CCCCccEEEEcCCCc-----ccH-HH---HHHhccCCCCc
Q 023482 214 SSSGFAKVVANIPFN-----IST-DV---IKQLLPMGDIF 244 (281)
Q Consensus 214 ~~~~~d~Vi~n~P~~-----~~~-~~---~~~ll~~~~~~ 244 (281)
.++||+|+++++.. ... .+ +.++++++|.+
T Consensus 131 -~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~l 169 (349)
T 3q7e_A 131 -VEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLI 169 (349)
T ss_dssp -SSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEE
T ss_pred -CCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEE
Confidence 36899999986421 112 22 35778888876
No 147
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.26 E-value=1.8e-11 Score=105.20 Aligned_cols=97 Identities=16% Similarity=0.172 Sum_probs=72.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhc--------CCCCeEEEEcCccc-cccccchhhHH
Q 023482 141 EGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFA--------SIDQLKVLQEDFVK-CHIRSHMLSLF 209 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~--------~~~~v~~~~gD~~~-~~~~d~~~d~v 209 (281)
++.+|||||||+|.++..++.. +.+|+|||+++.|++.|++++. ...|++++++|+.+ ++..
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~------- 118 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNF------- 118 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHH-------
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhh-------
Confidence 5678999999999999999987 5699999999999999987753 22489999999987 4400
Q ss_pred HhhcCCCCccEEEEcCCCcc--------------cHHHHHHhccCCCCcceE
Q 023482 210 ERRKSSSGFAKVVANIPFNI--------------STDVIKQLLPMGDIFSEV 247 (281)
Q Consensus 210 ~~~~~~~~~d~Vi~n~P~~~--------------~~~~~~~ll~~~~~~~~~ 247 (281)
...+.+|.|+.+.|-.+ .-..+.++|++||.+...
T Consensus 119 ---~~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~ 167 (235)
T 3ckk_A 119 ---FYKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTI 167 (235)
T ss_dssp ---CCTTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEE
T ss_pred ---CCCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEE
Confidence 12367899998755322 123345788888876433
No 148
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.26 E-value=9.1e-12 Score=106.97 Aligned_cols=95 Identities=9% Similarity=0.134 Sum_probs=72.8
Q ss_pred CCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEcCccccccccchhhHHHhhcCC
Q 023482 140 QEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 140 ~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
.++.+|||||||+|..+..++.. +.+|+|+|+++.+++.|+++.... .+++++++|+.++++.. ...
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~---------~~~ 139 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRK---------DVR 139 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCT---------TTT
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccc---------ccc
Confidence 46789999999999999999963 679999999999999999987644 37999999998876420 113
Q ss_pred CCccEEEEcCCCcccHHHH---HHhccCCCCc
Q 023482 216 SGFAKVVANIPFNISTDVI---KQLLPMGDIF 244 (281)
Q Consensus 216 ~~~d~Vi~n~P~~~~~~~~---~~ll~~~~~~ 244 (281)
+.||+|+++.. .....++ .++++++|.+
T Consensus 140 ~~fD~V~~~~~-~~~~~~l~~~~~~LkpgG~l 170 (240)
T 1xdz_A 140 ESYDIVTARAV-ARLSVLSELCLPLVKKNGLF 170 (240)
T ss_dssp TCEEEEEEECC-SCHHHHHHHHGGGEEEEEEE
T ss_pred CCccEEEEecc-CCHHHHHHHHHHhcCCCCEE
Confidence 67999998763 2223333 4677787766
No 149
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.26 E-value=1.7e-11 Score=110.50 Aligned_cols=103 Identities=17% Similarity=0.327 Sum_probs=78.8
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCccccccccc
Q 023482 129 INDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRSH 204 (281)
Q Consensus 129 ~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~-~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~~~~~~d~ 204 (281)
+.+.+.+.+...++.+|||||||+|.++..+++.++ +|+|+|++ ++++.|+++...+ ++++++++|+.+++++
T Consensus 26 y~~ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~-- 102 (328)
T 1g6q_1 26 YRNAIIQNKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLP-- 102 (328)
T ss_dssp HHHHHHHHHHHHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCS--
T ss_pred HHHHHHhhHhhcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCC--
Confidence 344454555555788999999999999999999865 99999999 6999999987654 3799999999988643
Q ss_pred hhhHHHhhcCCCCccEEEEcCCCcc------cHHHH---HHhccCCCCc
Q 023482 205 MLSLFERRKSSSGFAKVVANIPFNI------STDVI---KQLLPMGDIF 244 (281)
Q Consensus 205 ~~d~v~~~~~~~~~d~Vi~n~P~~~------~~~~~---~~ll~~~~~~ 244 (281)
.+.||+|+++++... ...++ .++++++|.+
T Consensus 103 ----------~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~l 141 (328)
T 1g6q_1 103 ----------FPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLI 141 (328)
T ss_dssp ----------SSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEE
T ss_pred ----------CCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEE
Confidence 267999999876321 12333 3788888766
No 150
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.25 E-value=8.3e-11 Score=107.77 Aligned_cols=118 Identities=12% Similarity=0.161 Sum_probs=88.5
Q ss_pred CCCcccCccccCCHHHHHHHHHHh--cCCCCCEEEEEcCCccHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhcCCC--
Q 023482 114 FPRKSLGQHYMLNSEINDQLAAAA--AVQEGDIVLEIGPGTGSLTNVLLNAG--ATVLAIEKDQHMVGLVRERFASID-- 187 (281)
Q Consensus 114 ~~~~~~g~~~~~~~~~~~~l~~~l--~~~~~~~VLDiGcG~G~~t~~la~~~--~~v~gvD~s~~~l~~a~~~~~~~~-- 187 (281)
.+...|.+.+.+.+.....++... ...++.+|||+| |+|.++..++..+ .+|+|+|+++.+++.|+++.+..+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~ 221 (373)
T 2qm3_A 143 EPLHEFDQAYVTPETTVARVILMHTRGDLENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYE 221 (373)
T ss_dssp CCCGGGTCCCBCHHHHHHHHHHHHHTTCSTTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCC
T ss_pred ccchhcCCeecCHHHHHHHHHHHhhcCCCCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC
Confidence 445567776667666666655432 233578999999 9999999999874 599999999999999999987544
Q ss_pred CeEEEEcCccc-cccccchhhHHHhhcCCCCccEEEEcCCCcccH-----HHHHHhccCCCC
Q 023482 188 QLKVLQEDFVK-CHIRSHMLSLFERRKSSSGFAKVVANIPFNIST-----DVIKQLLPMGDI 243 (281)
Q Consensus 188 ~v~~~~gD~~~-~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~-----~~~~~ll~~~~~ 243 (281)
+++++++|+.+ ++.. ..+.||+|++|+||.... ....++++++|.
T Consensus 222 ~v~~~~~D~~~~l~~~-----------~~~~fD~Vi~~~p~~~~~~~~~l~~~~~~LkpgG~ 272 (373)
T 2qm3_A 222 DIEIFTFDLRKPLPDY-----------ALHKFDTFITDPPETLEAIRAFVGRGIATLKGPRC 272 (373)
T ss_dssp CEEEECCCTTSCCCTT-----------TSSCBSEEEECCCSSHHHHHHHHHHHHHTBCSTTC
T ss_pred CEEEEEChhhhhchhh-----------ccCCccEEEECCCCchHHHHHHHHHHHHHcccCCe
Confidence 89999999988 5421 125799999999996532 223467788774
No 151
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.25 E-value=1.4e-11 Score=103.22 Aligned_cols=99 Identities=20% Similarity=0.238 Sum_probs=76.6
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhH
Q 023482 129 INDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSL 208 (281)
Q Consensus 129 ~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~ 208 (281)
....++..+ .++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.|+++. +++++.+|+.+++ .
T Consensus 33 ~~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~d~~~~~-~------ 99 (211)
T 3e23_A 33 TLTKFLGEL--PAGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRL----GRPVRTMLFHQLD-A------ 99 (211)
T ss_dssp HHHHHHTTS--CTTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----TSCCEECCGGGCC-C------
T ss_pred HHHHHHHhc--CCCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhc----CCceEEeeeccCC-C------
Confidence 344444443 36789999999999999999999889999999999999999887 5778999998876 2
Q ss_pred HHhhcCCCCccEEEEcCCCcccH--------HHHHHhccCCCCcce
Q 023482 209 FERRKSSSGFAKVVANIPFNIST--------DVIKQLLPMGDIFSE 246 (281)
Q Consensus 209 v~~~~~~~~~d~Vi~n~P~~~~~--------~~~~~ll~~~~~~~~ 246 (281)
.+.||+|+++..++... ..+.++++++|.+..
T Consensus 100 ------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 139 (211)
T 3e23_A 100 ------IDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYA 139 (211)
T ss_dssp ------CSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ------CCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 26899999987664432 233477777776543
No 152
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.25 E-value=3e-11 Score=100.78 Aligned_cols=97 Identities=16% Similarity=0.151 Sum_probs=72.9
Q ss_pred CCCCCEEEEEcCCccHHH-HHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 139 VQEGDIVLEIGPGTGSLT-NVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 139 ~~~~~~VLDiGcG~G~~t-~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
..++.+|||+|||+|..+ ..++..+.+|+|+|+++.+++.|+++.... .+++++++|+.+++++ .+
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~------------~~ 88 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFK------------DE 88 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSC------------TT
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCC------------CC
Confidence 446789999999999984 455556889999999999999999887543 4799999999988753 36
Q ss_pred CccEEEEcCCCccc--H------HHHHHhccCCCCcceE
Q 023482 217 GFAKVVANIPFNIS--T------DVIKQLLPMGDIFSEV 247 (281)
Q Consensus 217 ~~d~Vi~n~P~~~~--~------~~~~~ll~~~~~~~~~ 247 (281)
.||+|+++..++.. . ..+.++++++|.+-..
T Consensus 89 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 127 (209)
T 2p8j_A 89 SMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACIN 127 (209)
T ss_dssp CEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 79999997554332 1 2234777787766433
No 153
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.25 E-value=1e-11 Score=106.74 Aligned_cols=108 Identities=15% Similarity=0.195 Sum_probs=79.7
Q ss_pred ccCC-HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc------CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcC
Q 023482 123 YMLN-SEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA------GATVLAIEKDQHMVGLVRERFASIDQLKVLQED 195 (281)
Q Consensus 123 ~~~~-~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~------~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD 195 (281)
.... +.....+.+.+...++.+|||||||+|+++..+++. +++|+|||+++.+++.|+. . .++++++++|
T Consensus 62 ~~~~~p~~~~~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~-~--~~~v~~~~gD 138 (236)
T 2bm8_A 62 RMLKDPDTQAVYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS-D--MENITLHQGD 138 (236)
T ss_dssp ECCSCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG-G--CTTEEEEECC
T ss_pred cccCCHHHHHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc-c--CCceEEEECc
Confidence 3344 777776666665556789999999999999999986 6799999999999988872 2 2589999999
Q ss_pred cccc---ccccchhhHHHhhcCCCCccEEEEcCCCcccHHHHH---H-hccCCCCc
Q 023482 196 FVKC---HIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIK---Q-LLPMGDIF 244 (281)
Q Consensus 196 ~~~~---~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~~---~-ll~~~~~~ 244 (281)
+.+. +. .....||+|+.+........++. + ++++||.+
T Consensus 139 ~~~~~~l~~-----------~~~~~fD~I~~d~~~~~~~~~l~~~~r~~LkpGG~l 183 (236)
T 2bm8_A 139 CSDLTTFEH-----------LREMAHPLIFIDNAHANTFNIMKWAVDHLLEEGDYF 183 (236)
T ss_dssp SSCSGGGGG-----------GSSSCSSEEEEESSCSSHHHHHHHHHHHTCCTTCEE
T ss_pred chhHHHHHh-----------hccCCCCEEEECCchHhHHHHHHHHHHhhCCCCCEE
Confidence 9885 32 12236999998765333333433 3 88888865
No 154
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.25 E-value=3.8e-11 Score=98.51 Aligned_cols=91 Identities=19% Similarity=0.307 Sum_probs=72.0
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCCc
Q 023482 139 VQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGF 218 (281)
Q Consensus 139 ~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~ 218 (281)
+.++.+|||+|||+|.++..++..+.+++|+|+++.+++.++++.. +++++++|+.++++. .+.|
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~---~~~~~~~d~~~~~~~------------~~~~ 108 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDFP---EARWVVGDLSVDQIS------------ETDF 108 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT---TSEEEECCTTTSCCC------------CCCE
T ss_pred ccCCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhCC---CCcEEEcccccCCCC------------CCce
Confidence 3477899999999999999999998899999999999999998875 689999999987643 3679
Q ss_pred cEEEEcCC-Cccc-----HHH---HHHhccCCCCc
Q 023482 219 AKVVANIP-FNIS-----TDV---IKQLLPMGDIF 244 (281)
Q Consensus 219 d~Vi~n~P-~~~~-----~~~---~~~ll~~~~~~ 244 (281)
|+|+++++ ++.. ..+ +.++++++|.+
T Consensus 109 D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l 143 (195)
T 3cgg_A 109 DLIVSAGNVMGFLAEDGREPALANIHRALGADGRA 143 (195)
T ss_dssp EEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEE
T ss_pred eEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEE
Confidence 99999844 3222 222 24666766654
No 155
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.25 E-value=1.5e-11 Score=103.53 Aligned_cols=105 Identities=17% Similarity=0.264 Sum_probs=77.9
Q ss_pred HHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHH
Q 023482 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLF 209 (281)
Q Consensus 130 ~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v 209 (281)
...++..+...++.+|||||||+|.++..+++.+.+|+|+|+++.+++.|+++ .++.++.+|+.++.....
T Consensus 41 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~~~----- 111 (227)
T 3e8s_A 41 DQAILLAILGRQPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARAA----GAGEVHLASYAQLAEAKV----- 111 (227)
T ss_dssp HHHHHHHHHHTCCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHT----CSSCEEECCHHHHHTTCS-----
T ss_pred cHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHHHh----cccccchhhHHhhccccc-----
Confidence 34455555555678999999999999999999988999999999999999987 477899999887621100
Q ss_pred HhhcCCCCccEEEEcCCCccc--H---HHHHHhccCCCCcce
Q 023482 210 ERRKSSSGFAKVVANIPFNIS--T---DVIKQLLPMGDIFSE 246 (281)
Q Consensus 210 ~~~~~~~~~d~Vi~n~P~~~~--~---~~~~~ll~~~~~~~~ 246 (281)
.....||+|+++..++.. . ..+.++++++|.+..
T Consensus 112 ---~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~ 150 (227)
T 3e8s_A 112 ---PVGKDYDLICANFALLHQDIIELLSAMRTLLVPGGALVI 150 (227)
T ss_dssp ---CCCCCEEEEEEESCCCSSCCHHHHHHHHHTEEEEEEEEE
T ss_pred ---ccCCCccEEEECchhhhhhHHHHHHHHHHHhCCCeEEEE
Confidence 223459999998766521 1 334577777776533
No 156
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.25 E-value=2.2e-11 Score=108.49 Aligned_cols=95 Identities=11% Similarity=0.318 Sum_probs=77.9
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCcccccccc
Q 023482 127 SEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRS 203 (281)
Q Consensus 127 ~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d 203 (281)
+.+.+.+++.+.+.++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.|++++..+ ++++++++|+.+++..
T Consensus 12 pvLl~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~- 90 (301)
T 1m6y_A 12 PVMVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFL- 90 (301)
T ss_dssp CTTHHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHH-
T ss_pred HHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHH-
Confidence 346677888888888899999999999999999987 479999999999999999998765 4899999999887521
Q ss_pred chhhHHHhhcCCCCccEEEEcCCCc
Q 023482 204 HMLSLFERRKSSSGFAKVVANIPFN 228 (281)
Q Consensus 204 ~~~d~v~~~~~~~~~d~Vi~n~P~~ 228 (281)
+.. .....||.|+.++|+.
T Consensus 91 -----l~~-~g~~~~D~Vl~D~gvS 109 (301)
T 1m6y_A 91 -----LKT-LGIEKVDGILMDLGVS 109 (301)
T ss_dssp -----HHH-TTCSCEEEEEEECSCC
T ss_pred -----HHh-cCCCCCCEEEEcCccc
Confidence 000 1115799999999975
No 157
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.25 E-value=1.9e-11 Score=118.02 Aligned_cols=118 Identities=14% Similarity=0.150 Sum_probs=84.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCC--CeEEEEcCccccccccchhhHHHhhcCCCCc
Q 023482 141 EGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID--QLKVLQEDFVKCHIRSHMLSLFERRKSSSGF 218 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~--~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~ 218 (281)
.+.+|||||||.|.++..||+.|++|+|||+++.+++.|+.+....+ ++++.++|++++.-. ...+.|
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~----------~~~~~f 135 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAA----------LEEGEF 135 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHH----------CCTTSC
T ss_pred CCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhh----------ccCCCc
Confidence 56799999999999999999999999999999999999999887654 799999999887321 234689
Q ss_pred cEEEEcCCCcccH---------HHHHHhccCCCCcceEEEeehhhHHHHhcCCCCCCCccchh
Q 023482 219 AKVVANIPFNIST---------DVIKQLLPMGDIFSEVVLLLQEETALRLVEPSLRTSEYRPI 272 (281)
Q Consensus 219 d~Vi~n~P~~~~~---------~~~~~ll~~~~~~~~~~~~~~~~~a~rl~~~~pg~~~y~~~ 272 (281)
|+|++.-.++... .++..+-+.+.. .+..+.-.|+..++. +.|+.+|..|
T Consensus 136 D~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~--~~~~~~~~e~~~~~~--p~~~~~~~~~ 194 (569)
T 4azs_A 136 DLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQA--VILELAVKEEPFYWG--VSQPDDPREL 194 (569)
T ss_dssp SEEEEESCHHHHHHHHCHHHHHHHHHHHHHHSSE--EEEECCCTTSSSGGG--GGSCSSGGGG
T ss_pred cEEEECcchhcCCCHHHHHHHHHHHHHhccccce--eeEEecccccccccc--CCCCccHHHh
Confidence 9999876554332 222233333322 233344556666665 4566666655
No 158
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=99.24 E-value=2.9e-11 Score=115.79 Aligned_cols=105 Identities=15% Similarity=0.181 Sum_probs=83.8
Q ss_pred CCCcccCccccCCHHHHHHHHHHhc----CCCCCEEEEEcCCccHHHHHHHHc-----CCEEEEEeCCHHHHHHHHHHhc
Q 023482 114 FPRKSLGQHYMLNSEINDQLAAAAA----VQEGDIVLEIGPGTGSLTNVLLNA-----GATVLAIEKDQHMVGLVRERFA 184 (281)
Q Consensus 114 ~~~~~~g~~~~~~~~~~~~l~~~l~----~~~~~~VLDiGcG~G~~t~~la~~-----~~~v~gvD~s~~~l~~a~~~~~ 184 (281)
...+..|+ |++++.+++.|++.+. ..++.+|+|.+||+|.+...+++. ..+++|+|+++.++..|+.++.
T Consensus 191 ~~~k~~G~-fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~ 269 (542)
T 3lkd_A 191 DSGKKAGE-FYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMI 269 (542)
T ss_dssp C---CCSS-CCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHH
T ss_pred HhcccCCe-ecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHH
Confidence 45556777 9999999999999987 456789999999999999888775 4589999999999999998864
Q ss_pred CC----CCeEEEEcCccccccccchhhHHHhhcCCCCccEEEEcCCCc
Q 023482 185 SI----DQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFN 228 (281)
Q Consensus 185 ~~----~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~ 228 (281)
-. +++.+.++|....+++. .....||+|++||||.
T Consensus 270 l~gi~~~~~~I~~gDtL~~d~p~---------~~~~~fD~IvaNPPf~ 308 (542)
T 3lkd_A 270 LHGVPIENQFLHNADTLDEDWPT---------QEPTNFDGVLMNPPYS 308 (542)
T ss_dssp HTTCCGGGEEEEESCTTTSCSCC---------SSCCCBSEEEECCCTT
T ss_pred HcCCCcCccceEecceecccccc---------cccccccEEEecCCcC
Confidence 32 26789999998763221 2246899999999996
No 159
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.24 E-value=2.6e-12 Score=110.92 Aligned_cols=116 Identities=11% Similarity=0.100 Sum_probs=86.1
Q ss_pred ccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCc
Q 023482 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDF 196 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~ 196 (281)
+...+.....+...+...++.+|||||||+|+.+..+++. +++|+++|+++.+++.|++++... ++++++++|+
T Consensus 42 ~~i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda 121 (242)
T 3r3h_A 42 MQVAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPA 121 (242)
T ss_dssp TSCCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCH
T ss_pred CccCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 4566766666666666667889999999999999999985 579999999999999999998754 3899999999
Q ss_pred cccccccchhhHHHhhcCCCCccEEEEcCCCcccHHHH---HHhccCCCCc
Q 023482 197 VKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVI---KQLLPMGDIF 244 (281)
Q Consensus 197 ~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~---~~ll~~~~~~ 244 (281)
.+.... +... ...+.||+|+.+.+.......+ .+++++||.+
T Consensus 122 ~~~l~~-----~~~~-~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~l 166 (242)
T 3r3h_A 122 LDTLHS-----LLNE-GGEHQFDFIFIDADKTNYLNYYELALKLVTPKGLI 166 (242)
T ss_dssp HHHHHH-----HHHH-HCSSCEEEEEEESCGGGHHHHHHHHHHHEEEEEEE
T ss_pred HHHHHH-----Hhhc-cCCCCEeEEEEcCChHHhHHHHHHHHHhcCCCeEE
Confidence 775211 0000 0136899999988754444333 4677777765
No 160
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.24 E-value=8.6e-12 Score=100.92 Aligned_cols=96 Identities=15% Similarity=0.201 Sum_probs=75.2
Q ss_pred HHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhh
Q 023482 133 LAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERR 212 (281)
Q Consensus 133 l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~ 212 (281)
+++.+...++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.++++ .++++++.+| .++
T Consensus 9 ~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---~~~v~~~~~d---~~~----------- 71 (170)
T 3i9f_A 9 YLPNIFEGKKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEK---FDSVITLSDP---KEI----------- 71 (170)
T ss_dssp THHHHHSSCCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHH---CTTSEEESSG---GGS-----------
T ss_pred HHHhcCcCCCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHh---CCCcEEEeCC---CCC-----------
Confidence 44555667788999999999999999999866999999999999999988 3489999999 333
Q ss_pred cCCCCccEEEEcCCCcccH------HHHHHhccCCCCcce
Q 023482 213 KSSSGFAKVVANIPFNIST------DVIKQLLPMGDIFSE 246 (281)
Q Consensus 213 ~~~~~~d~Vi~n~P~~~~~------~~~~~ll~~~~~~~~ 246 (281)
..+.||+|+++..++... ..+.++++++|.+..
T Consensus 72 -~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~ 110 (170)
T 3i9f_A 72 -PDNSVDFILFANSFHDMDDKQHVISEVKRILKDDGRVII 110 (170)
T ss_dssp -CTTCEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEE
T ss_pred -CCCceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEE
Confidence 236899999987665431 334577777776543
No 161
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.24 E-value=2.9e-11 Score=103.19 Aligned_cols=102 Identities=16% Similarity=0.094 Sum_probs=76.1
Q ss_pred HhcCCCCCEEEEEcCCccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhh
Q 023482 136 AAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERR 212 (281)
Q Consensus 136 ~l~~~~~~~VLDiGcG~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~ 212 (281)
.+.+.++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.+.++.....+++++++|+.+.....
T Consensus 72 ~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~--------- 142 (233)
T 2ipx_A 72 QIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYR--------- 142 (233)
T ss_dssp CCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGG---------
T ss_pred eecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhc---------
Confidence 345667889999999999999999987 36999999999988877776665578999999998742100
Q ss_pred cCCCCccEEEEcCCCcccH----HHHHHhccCCCCcce
Q 023482 213 KSSSGFAKVVANIPFNIST----DVIKQLLPMGDIFSE 246 (281)
Q Consensus 213 ~~~~~~d~Vi~n~P~~~~~----~~~~~ll~~~~~~~~ 246 (281)
...+.||+|++++|..... ..+.++++++|.+-.
T Consensus 143 ~~~~~~D~V~~~~~~~~~~~~~~~~~~~~LkpgG~l~i 180 (233)
T 2ipx_A 143 MLIAMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVI 180 (233)
T ss_dssp GGCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccCCcEEEEEEcCCCccHHHHHHHHHHHHcCCCeEEEE
Confidence 1236899999998843222 224577888876643
No 162
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.24 E-value=1.7e-11 Score=104.09 Aligned_cols=114 Identities=21% Similarity=0.204 Sum_probs=85.0
Q ss_pred ccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCc
Q 023482 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDF 196 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~ 196 (281)
+...+.....+...+...++.+|||||||+|.++..+++. +.+|+++|+++.+++.|++++... .+++++++|+
T Consensus 51 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~ 130 (229)
T 2avd_A 51 SMMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPA 130 (229)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred CccCHHHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCH
Confidence 5566666666666566667889999999999999999986 579999999999999999988654 3899999998
Q ss_pred cccccccchhhHHHhhcCC--CCccEEEEcCCCcccHHHH---HHhccCCCCc
Q 023482 197 VKCHIRSHMLSLFERRKSS--SGFAKVVANIPFNISTDVI---KQLLPMGDIF 244 (281)
Q Consensus 197 ~~~~~~d~~~d~v~~~~~~--~~~d~Vi~n~P~~~~~~~~---~~ll~~~~~~ 244 (281)
.+.... +. ... +.||+|+.+++.......+ .++++++|.+
T Consensus 131 ~~~~~~-----~~---~~~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~l 175 (229)
T 2avd_A 131 LETLDE-----LL---AAGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGIL 175 (229)
T ss_dssp HHHHHH-----HH---HTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEE
T ss_pred HHHHHH-----HH---hcCCCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEE
Confidence 764110 00 111 5799999998865444333 4667777754
No 163
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.23 E-value=3.6e-11 Score=101.82 Aligned_cols=95 Identities=21% Similarity=0.258 Sum_probs=76.5
Q ss_pred CCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCC-------CeEEEEcCccccccccchhhHHHhhc
Q 023482 141 EGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID-------QLKVLQEDFVKCHIRSHMLSLFERRK 213 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~-------~v~~~~gD~~~~~~~d~~~d~v~~~~ 213 (281)
++.+|||+|||+|.++..++..+.+|+|+|+++.+++.|+++....+ +++++.+|+.++++.
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~----------- 98 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFH----------- 98 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSC-----------
T ss_pred CCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCC-----------
Confidence 67899999999999999999998899999999999999999887543 589999999988753
Q ss_pred CCCCccEEEEcCCCcccH---------HHHHHhccCCCCcceE
Q 023482 214 SSSGFAKVVANIPFNIST---------DVIKQLLPMGDIFSEV 247 (281)
Q Consensus 214 ~~~~~d~Vi~n~P~~~~~---------~~~~~ll~~~~~~~~~ 247 (281)
.+.||+|+++..++... ..+.++++++|.+-..
T Consensus 99 -~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (235)
T 3sm3_A 99 -DSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLV 140 (235)
T ss_dssp -TTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -CCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 36799999986654332 2234777887766433
No 164
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.23 E-value=5.4e-11 Score=101.99 Aligned_cols=122 Identities=13% Similarity=0.109 Sum_probs=86.1
Q ss_pred ccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCc
Q 023482 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASID---QLKVLQEDF 196 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~ 196 (281)
....+.....+...+...++.+|||||||+|..+..+++. +.+|+++|+++.+++.|++++...+ +++++++|+
T Consensus 42 ~~~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~ 121 (239)
T 2hnk_A 42 MQISPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSA 121 (239)
T ss_dssp CSCCHHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCH
Confidence 3567777777777776667889999999999999999987 5799999999999999999986543 599999998
Q ss_pred cccccccch----hhHHHhhcC-C-CCccEEEEcCCCcccH---HHHHHhccCCCCcc
Q 023482 197 VKCHIRSHM----LSLFERRKS-S-SGFAKVVANIPFNIST---DVIKQLLPMGDIFS 245 (281)
Q Consensus 197 ~~~~~~d~~----~d~v~~~~~-~-~~~d~Vi~n~P~~~~~---~~~~~ll~~~~~~~ 245 (281)
.+....... -.|... .. . +.||+|+.+....... ..+.++++++|.+.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~-f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv 178 (239)
T 2hnk_A 122 LETLQVLIDSKSAPSWASD-FAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLI 178 (239)
T ss_dssp HHHHHHHHHCSSCCGGGTT-TCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEE
T ss_pred HHHHHHHHhhccccccccc-ccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEE
Confidence 763110000 000000 01 2 6799999986654444 33446777777653
No 165
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.23 E-value=1.3e-11 Score=113.84 Aligned_cols=92 Identities=21% Similarity=0.300 Sum_probs=69.8
Q ss_pred cCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCC-CeEEEEcCccccccc
Q 023482 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHIR 202 (281)
Q Consensus 124 ~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~-~v~~~~gD~~~~~~~ 202 (281)
+.++.....++..+ ..++.+|||+|||+|.++..++..+++|+++|+|+.+++.|++++..++ ..++.++|+.+....
T Consensus 198 f~dqr~~r~~l~~~-~~~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~ 276 (393)
T 4dmg_A 198 YLDQRENRRLFEAM-VRPGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRG 276 (393)
T ss_dssp CGGGHHHHHHHHTT-CCTTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHT
T ss_pred CCCHHHHHHHHHHH-hcCCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHH
Confidence 33444444444433 2358899999999999999999998889999999999999999987554 346778998774210
Q ss_pred cchhhHHHhhcCCCCccEEEEcCCC
Q 023482 203 SHMLSLFERRKSSSGFAKVVANIPF 227 (281)
Q Consensus 203 d~~~d~v~~~~~~~~~d~Vi~n~P~ 227 (281)
. .+.||+|+.|||+
T Consensus 277 ----------~-~~~fD~Ii~dpP~ 290 (393)
T 4dmg_A 277 ----------L-EGPFHHVLLDPPT 290 (393)
T ss_dssp ----------C-CCCEEEEEECCCC
T ss_pred ----------h-cCCCCEEEECCCc
Confidence 1 2349999999998
No 166
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.23 E-value=1.2e-11 Score=113.36 Aligned_cols=93 Identities=25% Similarity=0.319 Sum_probs=72.5
Q ss_pred cCCCCCEEEEEcCCccHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCccccccccchhhHHHhhc
Q 023482 138 AVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSHMLSLFERRK 213 (281)
Q Consensus 138 ~~~~~~~VLDiGcG~G~~t~~la~~~~-~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~~~~~d~~~d~v~~~~ 213 (281)
...++++|||||||+|.+++.+|+.|+ +|+|||.++ +++.|++++..++ +|+++++|+.++.++
T Consensus 80 ~~~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp----------- 147 (376)
T 4hc4_A 80 AALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELP----------- 147 (376)
T ss_dssp HHHTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCS-----------
T ss_pred HhcCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCC-----------
Confidence 334788999999999999999998876 899999995 8899998887653 799999999998643
Q ss_pred CCCCccEEEEcC-----CCcccH-HH---HHHhccCCCCc
Q 023482 214 SSSGFAKVVANI-----PFNIST-DV---IKQLLPMGDIF 244 (281)
Q Consensus 214 ~~~~~d~Vi~n~-----P~~~~~-~~---~~~ll~~~~~~ 244 (281)
.++|+||+.. .+.... .+ ..++|+++|.+
T Consensus 148 --e~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~ 185 (376)
T 4hc4_A 148 --EQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLL 185 (376)
T ss_dssp --SCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEE
T ss_pred --ccccEEEeecccccccccchhhhHHHHHHhhCCCCceE
Confidence 6799999853 222222 22 24888888765
No 167
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.23 E-value=1.3e-11 Score=111.91 Aligned_cols=88 Identities=17% Similarity=0.224 Sum_probs=74.0
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhcCCC-CeEEEEcCccccccccc
Q 023482 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG--ATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHIRSH 204 (281)
Q Consensus 128 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~--~~v~gvD~s~~~l~~a~~~~~~~~-~v~~~~gD~~~~~~~d~ 204 (281)
.....+++.+...++.+|||+|||+|.++..+++.+ .+|+++|+++.+++.|+++...++ +++++.+|+.+.+
T Consensus 183 ~~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~---- 258 (343)
T 2pjd_A 183 VGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEV---- 258 (343)
T ss_dssp HHHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTC----
T ss_pred HHHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccc----
Confidence 356777888866667799999999999999999875 599999999999999999987554 6788999987642
Q ss_pred hhhHHHhhcCCCCccEEEEcCCCcc
Q 023482 205 MLSLFERRKSSSGFAKVVANIPFNI 229 (281)
Q Consensus 205 ~~d~v~~~~~~~~~d~Vi~n~P~~~ 229 (281)
.+.||+|++|+||+.
T Consensus 259 ----------~~~fD~Iv~~~~~~~ 273 (343)
T 2pjd_A 259 ----------KGRFDMIISNPPFHD 273 (343)
T ss_dssp ----------CSCEEEEEECCCCCS
T ss_pred ----------cCCeeEEEECCCccc
Confidence 267999999999975
No 168
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.23 E-value=1.2e-11 Score=103.18 Aligned_cols=102 Identities=15% Similarity=0.203 Sum_probs=76.1
Q ss_pred HHHHHHHHhcCC---CCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCCC--CeEEEEcCcccccc
Q 023482 129 INDQLAAAAAVQ---EGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASID--QLKVLQEDFVKCHI 201 (281)
Q Consensus 129 ~~~~l~~~l~~~---~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~~--~v~~~~gD~~~~~~ 201 (281)
+.+.+++.+... ++.+|||+|||+|..+..++.. +.+++|+|+++.+++.|+++....+ +++++++|+.+.+.
T Consensus 50 ~~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~ 129 (207)
T 1jsx_A 50 LVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPS 129 (207)
T ss_dssp HHHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCC
T ss_pred HHHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCc
Confidence 455555555432 3779999999999999999986 6799999999999999999887543 69999999988641
Q ss_pred ccchhhHHHhhcCCCCccEEEEcCCCcccHHHHH---HhccCCCCc
Q 023482 202 RSHMLSLFERRKSSSGFAKVVANIPFNISTDVIK---QLLPMGDIF 244 (281)
Q Consensus 202 ~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~~---~ll~~~~~~ 244 (281)
.+.||+|+++.. .....++. ++++++|.+
T Consensus 130 -------------~~~~D~i~~~~~-~~~~~~l~~~~~~L~~gG~l 161 (207)
T 1jsx_A 130 -------------EPPFDGVISRAF-ASLNDMVSWCHHLPGEQGRF 161 (207)
T ss_dssp -------------CSCEEEEECSCS-SSHHHHHHHHTTSEEEEEEE
T ss_pred -------------cCCcCEEEEecc-CCHHHHHHHHHHhcCCCcEE
Confidence 257999998742 22333443 556666654
No 169
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.22 E-value=2.2e-11 Score=109.23 Aligned_cols=93 Identities=14% Similarity=0.239 Sum_probs=76.4
Q ss_pred ccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCCC--CeEEEEcCcc
Q 023482 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASID--QLKVLQEDFV 197 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~~--~v~~~~gD~~ 197 (281)
+..+......+...+.+.++.+|||+|||+|..+..+++. +.+|+|+|+++.+++.+++++...+ +++++++|+.
T Consensus 100 ~~~qd~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~ 179 (315)
T 1ixk_A 100 IYIQEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSL 179 (315)
T ss_dssp EEECCHHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGG
T ss_pred EEEeCHHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChh
Confidence 4444455555667778888999999999999999999985 3699999999999999999987543 8999999998
Q ss_pred ccccccchhhHHHhhcCCCCccEEEEcCCC
Q 023482 198 KCHIRSHMLSLFERRKSSSGFAKVVANIPF 227 (281)
Q Consensus 198 ~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~ 227 (281)
+++. ..+.||+|++++|.
T Consensus 180 ~~~~------------~~~~fD~Il~d~Pc 197 (315)
T 1ixk_A 180 HIGE------------LNVEFDKILLDAPC 197 (315)
T ss_dssp GGGG------------GCCCEEEEEEECCT
T ss_pred hccc------------ccccCCEEEEeCCC
Confidence 8753 12579999999985
No 170
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.22 E-value=2.7e-11 Score=112.97 Aligned_cols=97 Identities=18% Similarity=0.269 Sum_probs=74.1
Q ss_pred CCHHHHHHHHHHhc-CCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCC-CeEEEEcCccccccc
Q 023482 125 LNSEINDQLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHIR 202 (281)
Q Consensus 125 ~~~~~~~~l~~~l~-~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~-~v~~~~gD~~~~~~~ 202 (281)
.++...+.+...+. ..++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.|+++...++ +++++++|+.++..
T Consensus 273 ~n~~~~e~l~~~~~~~~~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~- 351 (425)
T 2jjq_A 273 TNSYQAVNLVRKVSELVEGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSV- 351 (425)
T ss_dssp SBHHHHHHHHHHHHHHCCSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCC-
T ss_pred cCHHHHHHHHHHhhccCCCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCc-
Confidence 34444443333321 4567899999999999999999988899999999999999999886433 39999999988641
Q ss_pred cchhhHHHhhcCCCCccEEEEcCCCcccH-HHHH
Q 023482 203 SHMLSLFERRKSSSGFAKVVANIPFNIST-DVIK 235 (281)
Q Consensus 203 d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~-~~~~ 235 (281)
..||+|+.|||+.... .++.
T Consensus 352 -------------~~fD~Vv~dPPr~g~~~~~~~ 372 (425)
T 2jjq_A 352 -------------KGFDTVIVDPPRAGLHPRLVK 372 (425)
T ss_dssp -------------TTCSEEEECCCTTCSCHHHHH
T ss_pred -------------cCCCEEEEcCCccchHHHHHH
Confidence 2799999999985433 2444
No 171
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.22 E-value=5.7e-11 Score=101.25 Aligned_cols=105 Identities=20% Similarity=0.259 Sum_probs=80.6
Q ss_pred HHHHHHHHHhcCC--CCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCC-CeEEEEcCccccccccc
Q 023482 128 EINDQLAAAAAVQ--EGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHIRSH 204 (281)
Q Consensus 128 ~~~~~l~~~l~~~--~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~-~v~~~~gD~~~~~~~d~ 204 (281)
.+.+.+.+.+... ++.+|||+|||+|.++..+++.+.+++|+|+++.+++.|+++....+ +++++++|+.++++.
T Consensus 22 ~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-- 99 (246)
T 1y8c_A 22 KWSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNIN-- 99 (246)
T ss_dssp HHHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCS--
T ss_pred HHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCcc--
Confidence 3445555555433 67899999999999999999998899999999999999999887555 899999999987642
Q ss_pred hhhHHHhhcCCCCccEEEEcC-CCccc---H---HH---HHHhccCCCCcc
Q 023482 205 MLSLFERRKSSSGFAKVVANI-PFNIS---T---DV---IKQLLPMGDIFS 245 (281)
Q Consensus 205 ~~d~v~~~~~~~~~d~Vi~n~-P~~~~---~---~~---~~~ll~~~~~~~ 245 (281)
+.||+|+++. .++.. . .+ +.++++++|.+-
T Consensus 100 -----------~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~ 139 (246)
T 1y8c_A 100 -----------RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFI 139 (246)
T ss_dssp -----------CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEE
T ss_pred -----------CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEE
Confidence 6799999987 55443 2 22 236667776653
No 172
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.22 E-value=2.8e-11 Score=109.92 Aligned_cols=103 Identities=17% Similarity=0.209 Sum_probs=80.4
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCcccccccc
Q 023482 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRS 203 (281)
Q Consensus 128 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~-~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~~~~~~d 203 (281)
.+.+.+++.+...++.+|||||||+|.++..+++.+. +|+|+|+++ +++.|+++.+.+ ++++++++|+.+++++
T Consensus 37 ~y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~- 114 (348)
T 2y1w_A 37 TYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP- 114 (348)
T ss_dssp HHHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-
T ss_pred HHHHHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCC-
Confidence 3556677777777889999999999999999999865 999999996 889998887644 4899999999987532
Q ss_pred chhhHHHhhcCCCCccEEEEcCCCc-cc----HHHH---HHhccCCCCc
Q 023482 204 HMLSLFERRKSSSGFAKVVANIPFN-IS----TDVI---KQLLPMGDIF 244 (281)
Q Consensus 204 ~~~d~v~~~~~~~~~d~Vi~n~P~~-~~----~~~~---~~ll~~~~~~ 244 (281)
++||+|+++.++. .. ...+ .++++++|.+
T Consensus 115 ------------~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 151 (348)
T 2y1w_A 115 ------------EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNM 151 (348)
T ss_dssp ------------SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEE
T ss_pred ------------CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEE
Confidence 5799999997643 11 2233 4677777766
No 173
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.22 E-value=3.2e-11 Score=103.58 Aligned_cols=117 Identities=11% Similarity=0.107 Sum_probs=82.3
Q ss_pred ccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCc
Q 023482 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASID---QLKVLQEDF 196 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~ 196 (281)
....+.....+...+...++.+|||||||+|+.+..+++. +.+|+++|+++.+++.|+++++..+ +++++++|+
T Consensus 52 ~~~~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda 131 (237)
T 3c3y_A 52 MSTSPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDA 131 (237)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred CCcCHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 3345555555444455556789999999999999999986 6799999999999999999987543 699999999
Q ss_pred cccccccchhhHHHhhcCCCCccEEEEcCCCcccHHH---HHHhccCCCCc
Q 023482 197 VKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDV---IKQLLPMGDIF 244 (281)
Q Consensus 197 ~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~---~~~ll~~~~~~ 244 (281)
.+.... +...-...+.||+|+.+.+......+ +.+++++||.+
T Consensus 132 ~~~l~~-----l~~~~~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~l 177 (237)
T 3c3y_A 132 MLALDN-----LLQGQESEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIV 177 (237)
T ss_dssp HHHHHH-----HHHSTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEE
T ss_pred HHHHHH-----HHhccCCCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEE
Confidence 764110 00000013689999998764433333 34677777754
No 174
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.22 E-value=8.6e-12 Score=106.54 Aligned_cols=96 Identities=9% Similarity=0.086 Sum_probs=72.5
Q ss_pred CCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCC-HHHHHHH---HHHhcCC--CCeEEEEcCccccccccchhhHHHh
Q 023482 140 QEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKD-QHMVGLV---RERFASI--DQLKVLQEDFVKCHIRSHMLSLFER 211 (281)
Q Consensus 140 ~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s-~~~l~~a---~~~~~~~--~~v~~~~gD~~~~~~~d~~~d~v~~ 211 (281)
.++.+|||||||+|.++..+++. +.+|+|||+| +.|++.| +++.... .+++++++|+.++|..
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~--------- 93 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFE--------- 93 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGG---------
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhh---------
Confidence 46789999999999999999954 6799999999 7777776 6665443 3899999999998531
Q ss_pred hcCCCCccEEEEcCCCccc-----------HHHHHHhccCCCCcce
Q 023482 212 RKSSSGFAKVVANIPFNIS-----------TDVIKQLLPMGDIFSE 246 (281)
Q Consensus 212 ~~~~~~~d~Vi~n~P~~~~-----------~~~~~~ll~~~~~~~~ 246 (281)
..+.+|.|++|+|+... -..+.+++++||.+..
T Consensus 94 --~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 94 --LKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp --GTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred --ccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 12567888999886432 1334578888887644
No 175
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.22 E-value=5.2e-11 Score=101.52 Aligned_cols=103 Identities=17% Similarity=0.252 Sum_probs=78.9
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccch
Q 023482 127 SEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHM 205 (281)
Q Consensus 127 ~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~ 205 (281)
..+.+.+...+. ++.+|||+|||+|.++..+++. .+|+|+|+++.+++.|+++.... .+++++++|+.++++.
T Consensus 21 ~~~~~~~~~~~~--~~~~vLdiG~G~G~~~~~l~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~--- 94 (243)
T 3d2l_A 21 PEWVAWVLEQVE--PGKRIADIGCGTGTATLLLADH-YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELP--- 94 (243)
T ss_dssp HHHHHHHHHHSC--TTCEEEEESCTTCHHHHHHTTT-SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCS---
T ss_pred HHHHHHHHHHcC--CCCeEEEecCCCCHHHHHHhhC-CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCC---
Confidence 345666666655 4689999999999999999988 89999999999999999987644 3899999999887632
Q ss_pred hhHHHhhcCCCCccEEEEcC-CCccc---H------HHHHHhccCCCCcc
Q 023482 206 LSLFERRKSSSGFAKVVANI-PFNIS---T------DVIKQLLPMGDIFS 245 (281)
Q Consensus 206 ~d~v~~~~~~~~~d~Vi~n~-P~~~~---~------~~~~~ll~~~~~~~ 245 (281)
+.||+|+++. .++.. . ..+.++++++|.+-
T Consensus 95 ----------~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~ 134 (243)
T 3d2l_A 95 ----------EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLL 134 (243)
T ss_dssp ----------SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEE
T ss_pred ----------CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEE
Confidence 6799999864 33322 1 22346777777653
No 176
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.22 E-value=5.3e-11 Score=104.57 Aligned_cols=97 Identities=21% Similarity=0.275 Sum_probs=76.2
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCccccccccchhhHHHhhcC
Q 023482 139 VQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSHMLSLFERRKS 214 (281)
Q Consensus 139 ~~~~~~VLDiGcG~G~~t~~la~~~~-~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~~~~~d~~~d~v~~~~~ 214 (281)
+.++.+|||||||+|.++..++..+. +|+|+|+++.+++.|+++....+ +++++++|+.+.++. .
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-----------~ 130 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMD-----------L 130 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCC-----------C
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccC-----------C
Confidence 45778999999999999999988865 99999999999999999987653 699999999988751 2
Q ss_pred CCCccEEEEcCCCcc----cH------HHHHHhccCCCCcce
Q 023482 215 SSGFAKVVANIPFNI----ST------DVIKQLLPMGDIFSE 246 (281)
Q Consensus 215 ~~~~d~Vi~n~P~~~----~~------~~~~~ll~~~~~~~~ 246 (281)
.+.||+|+++..++. .. ..+.++++++|.+..
T Consensus 131 ~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 172 (298)
T 1ri5_A 131 GKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIM 172 (298)
T ss_dssp SSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred CCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 368999999865543 11 223467788777643
No 177
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.21 E-value=1e-11 Score=109.07 Aligned_cols=93 Identities=16% Similarity=0.220 Sum_probs=73.9
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc--C-CEEEEEeCCHHHHHHHHHHhcCCC--CeEEEEcCcccccccc
Q 023482 129 INDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--G-ATVLAIEKDQHMVGLVRERFASID--QLKVLQEDFVKCHIRS 203 (281)
Q Consensus 129 ~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~--~-~~v~gvD~s~~~l~~a~~~~~~~~--~v~~~~gD~~~~~~~d 203 (281)
....+...+.+.++.+|||+|||+|..+..+++. + .+|+|+|+++.+++.++++....+ +++++++|+.+++...
T Consensus 71 ~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~ 150 (274)
T 3ajd_A 71 SSMIPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYL 150 (274)
T ss_dssp GGGHHHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhh
Confidence 3344555667788999999999999999999984 4 699999999999999999987654 8999999998764210
Q ss_pred chhhHHHhhcCCCCccEEEEcCCCcc
Q 023482 204 HMLSLFERRKSSSGFAKVVANIPFNI 229 (281)
Q Consensus 204 ~~~d~v~~~~~~~~~d~Vi~n~P~~~ 229 (281)
. ...+.||+|++++|+..
T Consensus 151 -----~---~~~~~fD~Vl~d~Pcs~ 168 (274)
T 3ajd_A 151 -----L---KNEIFFDKILLDAPCSG 168 (274)
T ss_dssp -----H---HTTCCEEEEEEEECCC-
T ss_pred -----h---hccccCCEEEEcCCCCC
Confidence 0 12468999999999853
No 178
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.21 E-value=8.5e-11 Score=100.58 Aligned_cols=102 Identities=12% Similarity=0.207 Sum_probs=76.1
Q ss_pred HHHHHHHHhc-CCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCcccc--ccccch
Q 023482 129 INDQLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKC--HIRSHM 205 (281)
Q Consensus 129 ~~~~l~~~l~-~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~--~~~d~~ 205 (281)
+...+...+. +.++.+|||||||+|.++..+++.+.+|+|+|+|+.+++.|+++ ++++.+|+.+. ++
T Consensus 28 ~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~------~~~~~~d~~~~~~~~---- 97 (240)
T 3dli_A 28 VKARLRRYIPYFKGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGK------FNVVKSDAIEYLKSL---- 97 (240)
T ss_dssp HHHHHGGGGGGTTTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTT------SEEECSCHHHHHHTS----
T ss_pred HHHHHHHHHhhhcCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhh------cceeeccHHHHhhhc----
Confidence 3334433333 34668999999999999999999988999999999999999875 78999998875 43
Q ss_pred hhHHHhhcCCCCccEEEEcCCCccc-----H---HHHHHhccCCCCcceEE
Q 023482 206 LSLFERRKSSSGFAKVVANIPFNIS-----T---DVIKQLLPMGDIFSEVV 248 (281)
Q Consensus 206 ~d~v~~~~~~~~~d~Vi~n~P~~~~-----~---~~~~~ll~~~~~~~~~~ 248 (281)
..+.||+|+++..++.. . ..+.++++++|.+....
T Consensus 98 --------~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (240)
T 3dli_A 98 --------PDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIES 140 (240)
T ss_dssp --------CTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEE
T ss_pred --------CCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 23789999997554322 2 23357889998875443
No 179
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.21 E-value=1.4e-11 Score=103.95 Aligned_cols=101 Identities=17% Similarity=0.163 Sum_probs=72.8
Q ss_pred HHHHHhcCCCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHh----cCC--CCeEEEEcCcccccccc
Q 023482 132 QLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERF----ASI--DQLKVLQEDFVKCHIRS 203 (281)
Q Consensus 132 ~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~----~~~--~~v~~~~gD~~~~~~~d 203 (281)
..++.+.+.++.+|||+|||+|.++..+++. +.+|+|+|+++.|++.+.++. ... .+++++++|+.++++.+
T Consensus 18 ~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~ 97 (218)
T 3mq2_A 18 AEFEQLRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLS 97 (218)
T ss_dssp HHHHHHHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCC
T ss_pred HHHHHhhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCC
Confidence 3445556668889999999999999999998 679999999999888643322 222 38999999999988643
Q ss_pred chhhHHHhhcCCCCccEEEEcCCCccc-----------HHHHHHhccCCCCcc
Q 023482 204 HMLSLFERRKSSSGFAKVVANIPFNIS-----------TDVIKQLLPMGDIFS 245 (281)
Q Consensus 204 ~~~d~v~~~~~~~~~d~Vi~n~P~~~~-----------~~~~~~ll~~~~~~~ 245 (281)
+. |.|+...++... -..+.++++++|.+.
T Consensus 98 ------------~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 137 (218)
T 3mq2_A 98 ------------GV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFL 137 (218)
T ss_dssp ------------CE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEE
T ss_pred ------------CC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEE
Confidence 33 666655554322 133457778877653
No 180
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.21 E-value=2.6e-11 Score=111.62 Aligned_cols=97 Identities=11% Similarity=0.122 Sum_probs=74.7
Q ss_pred ccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCC----CeEEEEcCcc
Q 023482 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASID----QLKVLQEDFV 197 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~-~v~gvD~s~~~l~~a~~~~~~~~----~v~~~~gD~~ 197 (281)
|+.++.....++...- .++.+|||+|||+|.++..++..++ +|+|+|+|+.+++.|++|...++ +++++++|+.
T Consensus 195 ff~~~~~~~~~~~~~~-~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~ 273 (385)
T 2b78_A 195 IFLDQRQVRNELINGS-AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF 273 (385)
T ss_dssp SCGGGHHHHHHHHHTT-TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH
T ss_pred cCCcHHHHHHHHHHHh-cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHH
Confidence 3455555555555442 4678999999999999999999765 99999999999999999987553 7999999997
Q ss_pred ccccccchhhHHHhhcCCCCccEEEEcCCCc
Q 023482 198 KCHIRSHMLSLFERRKSSSGFAKVVANIPFN 228 (281)
Q Consensus 198 ~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~ 228 (281)
+.... +. .....||+|+.|||+.
T Consensus 274 ~~l~~-----~~---~~~~~fD~Ii~DPP~~ 296 (385)
T 2b78_A 274 DYFKY-----AR---RHHLTYDIIIIDPPSF 296 (385)
T ss_dssp HHHHH-----HH---HTTCCEEEEEECCCCC
T ss_pred HHHHH-----HH---HhCCCccEEEECCCCC
Confidence 73210 00 1245899999999994
No 181
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.21 E-value=4.7e-11 Score=102.32 Aligned_cols=102 Identities=11% Similarity=0.090 Sum_probs=77.1
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCCc
Q 023482 139 VQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGF 218 (281)
Q Consensus 139 ~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~ 218 (281)
+.++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|+++.. ..+++++++|+.+++.... +|. ...|
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~-~~~~~~~~~d~~~~~~~~~-~~~------~~~~ 125 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENT-AANISYRLLDGLVPEQAAQ-IHS------EIGD 125 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSC-CTTEEEEECCTTCHHHHHH-HHH------HHCS
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCc-ccCceEEECcccccccccc-ccc------ccCc
Confidence 3567799999999999999999998899999999999999999874 3489999999998764321 111 1358
Q ss_pred cEEEEcCCCcccH-----HH---HHHhccCCCCcceEE
Q 023482 219 AKVVANIPFNIST-----DV---IKQLLPMGDIFSEVV 248 (281)
Q Consensus 219 d~Vi~n~P~~~~~-----~~---~~~ll~~~~~~~~~~ 248 (281)
|+|+++..++... .+ +.++++++|.+....
T Consensus 126 d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 126 ANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp CEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred cEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 9999976554333 22 347788888754333
No 182
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.20 E-value=3.4e-11 Score=107.04 Aligned_cols=95 Identities=18% Similarity=0.125 Sum_probs=75.9
Q ss_pred cCCCCCEEEEEcCCccHHHHHHH--Hc-CCEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCccccccccchhhHHHh
Q 023482 138 AVQEGDIVLEIGPGTGSLTNVLL--NA-GATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSHMLSLFER 211 (281)
Q Consensus 138 ~~~~~~~VLDiGcG~G~~t~~la--~~-~~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~~~~~d~~~d~v~~ 211 (281)
.+.++.+|||||||+|..+..++ .. +.+|+|+|+++.+++.|+++....+ +++++++|+.++++
T Consensus 115 ~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---------- 184 (305)
T 3ocj_A 115 HLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDT---------- 184 (305)
T ss_dssp HCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCC----------
T ss_pred hCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCc----------
Confidence 35678899999999999999995 22 6699999999999999999987654 59999999999874
Q ss_pred hcCCCCccEEEEcCCCccc--H-------HHHHHhccCCCCcc
Q 023482 212 RKSSSGFAKVVANIPFNIS--T-------DVIKQLLPMGDIFS 245 (281)
Q Consensus 212 ~~~~~~~d~Vi~n~P~~~~--~-------~~~~~ll~~~~~~~ 245 (281)
. +.||+|+++.+++.. . ..+.+++++||.+.
T Consensus 185 --~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 224 (305)
T 3ocj_A 185 --R-EGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALV 224 (305)
T ss_dssp --C-SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred --c-CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEE
Confidence 2 689999998876543 1 23346778877653
No 183
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.20 E-value=5.9e-11 Score=116.95 Aligned_cols=102 Identities=11% Similarity=0.138 Sum_probs=80.9
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHhc--------CCCCeEEEEcCc
Q 023482 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG---ATVLAIEKDQHMVGLVRERFA--------SIDQLKVLQEDF 196 (281)
Q Consensus 128 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~---~~v~gvD~s~~~l~~a~~~~~--------~~~~v~~~~gD~ 196 (281)
...+.+++.+...++.+|||||||+|.++..|++.+ .+|+|||+++.|++.|++++. ...+++++++|+
T Consensus 708 qRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa 787 (950)
T 3htx_A 708 QRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSI 787 (950)
T ss_dssp HHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCT
T ss_pred HHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECch
Confidence 456667777776788999999999999999999986 799999999999999988553 123899999999
Q ss_pred cccccccchhhHHHhhcCCCCccEEEEcCCCcccH-H-------HHHHhccCC
Q 023482 197 VKCHIRSHMLSLFERRKSSSGFAKVVANIPFNIST-D-------VIKQLLPMG 241 (281)
Q Consensus 197 ~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~-~-------~~~~ll~~~ 241 (281)
.++++.+ +.||+|+++..+++.. + .+.+++++|
T Consensus 788 ~dLp~~d------------~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG 828 (950)
T 3htx_A 788 LEFDSRL------------HDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK 828 (950)
T ss_dssp TSCCTTS------------CSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS
T ss_pred HhCCccc------------CCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC
Confidence 9988543 6799999976654432 2 235777776
No 184
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.20 E-value=3.9e-11 Score=110.26 Aligned_cols=99 Identities=20% Similarity=0.242 Sum_probs=78.5
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCC----------CCeEEEEcCcccc------
Q 023482 139 VQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASI----------DQLKVLQEDFVKC------ 199 (281)
Q Consensus 139 ~~~~~~VLDiGcG~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~----------~~v~~~~gD~~~~------ 199 (281)
..++.+|||||||+|..+..+++. +.+|+|+|+++.+++.|++++... .+++++++|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 447789999999999999999885 459999999999999999886421 4999999999987
Q ss_pred ccccchhhHHHhhcCCCCccEEEEcCCCcccH------HHHHHhccCCCCcceEEE
Q 023482 200 HIRSHMLSLFERRKSSSGFAKVVANIPFNIST------DVIKQLLPMGDIFSEVVL 249 (281)
Q Consensus 200 ~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~------~~~~~ll~~~~~~~~~~~ 249 (281)
+++ .+.||+|+++..++... ..+.+++++||.+.....
T Consensus 161 ~~~------------~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~ 204 (383)
T 4fsd_A 161 GVP------------DSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDV 204 (383)
T ss_dssp CCC------------TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCC------------CCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEe
Confidence 543 36899999998776542 334578888887754443
No 185
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.19 E-value=8.5e-11 Score=98.35 Aligned_cols=97 Identities=18% Similarity=0.176 Sum_probs=74.6
Q ss_pred HHHHhcCCCCCEEEEEcCCccHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHh
Q 023482 133 LAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFER 211 (281)
Q Consensus 133 l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~-~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~ 211 (281)
++..+.. ++.+|||+|||+|.++..+ +. +++|+|+++.+++.++++. .+++++++|+.++++.+
T Consensus 29 ~l~~~~~-~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~d~~~~~~~~-------- 93 (211)
T 2gs9_A 29 ALKGLLP-PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA---PEATWVRAWGEALPFPG-------- 93 (211)
T ss_dssp HHHTTCC-CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC---TTSEEECCCTTSCCSCS--------
T ss_pred HHHHhcC-CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC---CCcEEEEcccccCCCCC--------
Confidence 3444433 6789999999999999888 66 9999999999999999887 48899999999887543
Q ss_pred hcCCCCccEEEEcCCCcccH------HHHHHhccCCCCcceEE
Q 023482 212 RKSSSGFAKVVANIPFNIST------DVIKQLLPMGDIFSEVV 248 (281)
Q Consensus 212 ~~~~~~~d~Vi~n~P~~~~~------~~~~~ll~~~~~~~~~~ 248 (281)
+.||+|+++..++... ..+.++++++|.+-...
T Consensus 94 ----~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 94 ----ESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGV 132 (211)
T ss_dssp ----SCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----CcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEe
Confidence 6799999986654432 23357778887764443
No 186
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.19 E-value=3.7e-11 Score=108.67 Aligned_cols=89 Identities=16% Similarity=0.296 Sum_probs=72.8
Q ss_pred CCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 140 QEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 140 ~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
.++.+|||+|||+|.++.. +..+.+|+|+|+|+.+++.|+++...++ +++++++|+.++. .
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---------------~ 257 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---------------V 257 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---------------C
T ss_pred CCCCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---------------C
Confidence 4778999999999999999 8766799999999999999999987553 7999999998753 5
Q ss_pred CccEEEEcCCCcccH--HHHHHhccCCCCc
Q 023482 217 GFAKVVANIPFNIST--DVIKQLLPMGDIF 244 (281)
Q Consensus 217 ~~d~Vi~n~P~~~~~--~~~~~ll~~~~~~ 244 (281)
.||+|+.|||+.... ..+.++++++|.+
T Consensus 258 ~fD~Vi~dpP~~~~~~l~~~~~~L~~gG~l 287 (336)
T 2yx1_A 258 KGNRVIMNLPKFAHKFIDKALDIVEEGGVI 287 (336)
T ss_dssp CEEEEEECCTTTGGGGHHHHHHHEEEEEEE
T ss_pred CCcEEEECCcHhHHHHHHHHHHHcCCCCEE
Confidence 799999999976432 3334666776654
No 187
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.19 E-value=3.5e-11 Score=111.10 Aligned_cols=93 Identities=16% Similarity=0.168 Sum_probs=71.3
Q ss_pred CHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhcCC---C-CeEEEEcCccccc
Q 023482 126 NSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG-ATVLAIEKDQHMVGLVRERFASI---D-QLKVLQEDFVKCH 200 (281)
Q Consensus 126 ~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~-~~v~gvD~s~~~l~~a~~~~~~~---~-~v~~~~gD~~~~~ 200 (281)
++.....++..+ .++.+|||+|||+|.++..++..+ .+|+|+|+++.+++.|+++...+ . +++++++|+.+..
T Consensus 207 ~~~~~~~~l~~~--~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~ 284 (396)
T 3c0k_A 207 DQRDSRLATRRY--VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLL 284 (396)
T ss_dssp GGHHHHHHHHHH--CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHH
T ss_pred CHHHHHHHHHHh--hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHH
Confidence 333334444444 467899999999999999999985 49999999999999999998643 2 7999999998753
Q ss_pred cccchhhHHHhhcCCCCccEEEEcCCCc
Q 023482 201 IRSHMLSLFERRKSSSGFAKVVANIPFN 228 (281)
Q Consensus 201 ~~d~~~d~v~~~~~~~~~d~Vi~n~P~~ 228 (281)
.. +. .....||+|+.|||+.
T Consensus 285 ~~-----~~---~~~~~fD~Ii~dpP~~ 304 (396)
T 3c0k_A 285 RT-----YR---DRGEKFDVIVMDPPKF 304 (396)
T ss_dssp HH-----HH---HTTCCEEEEEECCSST
T ss_pred HH-----HH---hcCCCCCEEEECCCCC
Confidence 11 00 1246899999999983
No 188
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.19 E-value=1.7e-10 Score=100.37 Aligned_cols=92 Identities=13% Similarity=0.231 Sum_probs=74.9
Q ss_pred CCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 140 QEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 140 ~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
.++.+|||||||+|.++..+++. +.+|+|+|+++.+++.|+++.. ++.++.+|+.++++.+ +.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~d~~~~~~~~------------~~ 148 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYP---QVTFCVASSHRLPFSD------------TS 148 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCT---TSEEEECCTTSCSBCT------------TC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCC---CcEEEEcchhhCCCCC------------Cc
Confidence 46789999999999999999997 6799999999999999998763 7899999999887543 67
Q ss_pred ccEEEEcCCCcccHHHHHHhccCCCCcceE
Q 023482 218 FAKVVANIPFNISTDVIKQLLPMGDIFSEV 247 (281)
Q Consensus 218 ~d~Vi~n~P~~~~~~~~~~ll~~~~~~~~~ 247 (281)
||+|+++..... -..+.++++++|.+...
T Consensus 149 fD~v~~~~~~~~-l~~~~~~L~pgG~l~~~ 177 (269)
T 1p91_A 149 MDAIIRIYAPCK-AEELARVVKPGGWVITA 177 (269)
T ss_dssp EEEEEEESCCCC-HHHHHHHEEEEEEEEEE
T ss_pred eeEEEEeCChhh-HHHHHHhcCCCcEEEEE
Confidence 899998765443 45556788888776433
No 189
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.19 E-value=3.4e-11 Score=111.20 Aligned_cols=97 Identities=24% Similarity=0.247 Sum_probs=74.3
Q ss_pred ccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCccc
Q 023482 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVK 198 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~-~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~ 198 (281)
|+.++.....++..+. .++.+|||+|||+|.++..++..++ +|+|+|+++.+++.|+++...++ +++++++|+.+
T Consensus 200 ~f~~~~~~~~~~~~~~-~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~ 278 (396)
T 2as0_A 200 FFLDQRENRLALEKWV-QPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFE 278 (396)
T ss_dssp CCSTTHHHHHHHGGGC-CTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred ccCCHHHHHHHHHHHh-hCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHH
Confidence 3444444444444442 3678999999999999999999854 99999999999999999987654 79999999987
Q ss_pred cccccchhhHHHhhcCCCCccEEEEcCCCc
Q 023482 199 CHIRSHMLSLFERRKSSSGFAKVVANIPFN 228 (281)
Q Consensus 199 ~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~ 228 (281)
.... +. .....||+|+.|||+.
T Consensus 279 ~~~~-----~~---~~~~~fD~Vi~dpP~~ 300 (396)
T 2as0_A 279 EMEK-----LQ---KKGEKFDIVVLDPPAF 300 (396)
T ss_dssp HHHH-----HH---HTTCCEEEEEECCCCS
T ss_pred HHHH-----HH---hhCCCCCEEEECCCCC
Confidence 5311 00 1246899999999984
No 190
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.18 E-value=9e-11 Score=101.15 Aligned_cols=97 Identities=19% Similarity=0.191 Sum_probs=72.3
Q ss_pred CCCCEEEEEcCCccHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhcC----------CCCeEEEEcCccc-cccccchh
Q 023482 140 QEGDIVLEIGPGTGSLTNVLLNAG--ATVLAIEKDQHMVGLVRERFAS----------IDQLKVLQEDFVK-CHIRSHML 206 (281)
Q Consensus 140 ~~~~~VLDiGcG~G~~t~~la~~~--~~v~gvD~s~~~l~~a~~~~~~----------~~~v~~~~gD~~~-~~~~d~~~ 206 (281)
.++.+|||||||+|.++..++..+ .+|+|||+++.+++.|+++... ..|++++++|+.+ ++..
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~---- 123 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNF---- 123 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGT----
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHh----
Confidence 356799999999999999999874 5899999999999999887653 2589999999987 4310
Q ss_pred hHHHhhcCCCCccEEEEcCCCcc--------------cHHHHHHhccCCCCcce
Q 023482 207 SLFERRKSSSGFAKVVANIPFNI--------------STDVIKQLLPMGDIFSE 246 (281)
Q Consensus 207 d~v~~~~~~~~~d~Vi~n~P~~~--------------~~~~~~~ll~~~~~~~~ 246 (281)
...+.+|.|+.+.|-.+ .-..+.+++++||.+..
T Consensus 124 ------~~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~ 171 (246)
T 2vdv_E 124 ------FEKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYT 171 (246)
T ss_dssp ------SCTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEE
T ss_pred ------ccccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEE
Confidence 12367888887754332 22334578888877644
No 191
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.18 E-value=5.2e-11 Score=114.20 Aligned_cols=101 Identities=14% Similarity=0.067 Sum_probs=80.8
Q ss_pred cccCccccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc--------------------CCEEEEEeCCHHHH
Q 023482 117 KSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--------------------GATVLAIEKDQHMV 176 (281)
Q Consensus 117 ~~~g~~~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~--------------------~~~v~gvD~s~~~l 176 (281)
...|+ |++++.+++.|++.+.+.++.+|||++||+|.++..+++. ..+++|+|+++.++
T Consensus 146 ~~~G~-fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~ 224 (541)
T 2ar0_A 146 SGAGQ-YFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTR 224 (541)
T ss_dssp ----C-CCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHH
T ss_pred ccCCe-eeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHH
Confidence 34566 8899999999999999888889999999999999888753 13799999999999
Q ss_pred HHHHHHhcCCC--C-----eEEEEcCccccccccchhhHHHhhcCCCCccEEEEcCCCcc
Q 023482 177 GLVRERFASID--Q-----LKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNI 229 (281)
Q Consensus 177 ~~a~~~~~~~~--~-----v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~ 229 (281)
+.|+.++.-.+ + +.+.++|....+. .....||+|++||||..
T Consensus 225 ~lA~~nl~l~gi~~~~~~~~~I~~gDtL~~~~-----------~~~~~fD~Vv~NPPf~~ 273 (541)
T 2ar0_A 225 RLALMNCLLHDIEGNLDHGGAIRLGNTLGSDG-----------ENLPKAHIVATNPPFGS 273 (541)
T ss_dssp HHHHHHHHTTTCCCBGGGTBSEEESCTTSHHH-----------HTSCCEEEEEECCCCTT
T ss_pred HHHHHHHHHhCCCccccccCCeEeCCCccccc-----------ccccCCeEEEECCCccc
Confidence 99998875443 3 7899999876542 12367999999999964
No 192
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.18 E-value=1.3e-11 Score=107.68 Aligned_cols=85 Identities=14% Similarity=0.023 Sum_probs=66.4
Q ss_pred HHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCH-------HHHHHHHHHhcCC---CCeEEEEcCccccccccc
Q 023482 135 AAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQ-------HMVGLVRERFASI---DQLKVLQEDFVKCHIRSH 204 (281)
Q Consensus 135 ~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~-------~~l~~a~~~~~~~---~~v~~~~gD~~~~~~~d~ 204 (281)
+.+...++.+|||+|||+|..++.++..+++|+|+|+++ .+++.|+++...+ ++++++++|+.++...
T Consensus 77 ~a~~~~~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~-- 154 (258)
T 2r6z_A 77 KAVNHTAHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPA-- 154 (258)
T ss_dssp HHTTGGGCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHH--
T ss_pred HHhCcCCcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHh--
Confidence 333445678999999999999999999988999999999 9999998876543 2599999999874210
Q ss_pred hhhHHHhhcCC--CCccEEEEcCCCcc
Q 023482 205 MLSLFERRKSS--SGFAKVVANIPFNI 229 (281)
Q Consensus 205 ~~d~v~~~~~~--~~~d~Vi~n~P~~~ 229 (281)
... ..||+|+.||||..
T Consensus 155 --------~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 155 --------LVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp --------HHHHHCCCSEEEECCCC--
T ss_pred --------hhccCCCccEEEECCCCCC
Confidence 111 57999999999864
No 193
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.17 E-value=3.6e-11 Score=102.99 Aligned_cols=94 Identities=12% Similarity=0.064 Sum_probs=73.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 141 EGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
++.+|||||||+|.++..+++. ..+|+|+|+++.+++.|+++.... .+++++++|+.++++. .+.
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~------------~~~ 146 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPE------------PDS 146 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCC------------SSC
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCC------------CCC
Confidence 5789999999999999999887 459999999999999999998754 2799999999888743 257
Q ss_pred ccEEEEcCCCccc-H-------HHHHHhccCCCCcce
Q 023482 218 FAKVVANIPFNIS-T-------DVIKQLLPMGDIFSE 246 (281)
Q Consensus 218 ~d~Vi~n~P~~~~-~-------~~~~~ll~~~~~~~~ 246 (281)
||+|+++..++.. . ..+.++++++|.+..
T Consensus 147 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i 183 (241)
T 2ex4_A 147 YDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVI 183 (241)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 9999998554322 2 222467777776644
No 194
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.17 E-value=1.6e-10 Score=107.51 Aligned_cols=111 Identities=14% Similarity=0.141 Sum_probs=80.9
Q ss_pred CHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc-C-CEEEEEeCCHHHHHHH-------HHHhcCC----CCeEEE
Q 023482 126 NSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-G-ATVLAIEKDQHMVGLV-------RERFASI----DQLKVL 192 (281)
Q Consensus 126 ~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~-~-~~v~gvD~s~~~l~~a-------~~~~~~~----~~v~~~ 192 (281)
.+.++..+++.+.+.++.+|||||||+|.++..++.. + .+|+|||+++.+++.| ++++... ++++++
T Consensus 227 ~p~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i 306 (433)
T 1u2z_A 227 LPNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFS 306 (433)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEE
T ss_pred cHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEE
Confidence 3788899999999989999999999999999999986 4 4899999999999988 7776532 489999
Q ss_pred EcCccccccccchhhHHHhhcCCCCccEEEEcCCCcccH-----HHHHHhccCCCCc
Q 023482 193 QEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNIST-----DVIKQLLPMGDIF 244 (281)
Q Consensus 193 ~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~-----~~~~~ll~~~~~~ 244 (281)
++|....+.. ++ ...+.||+|++|....... ..+.+.+++||.+
T Consensus 307 ~gD~~~~~~~---~~-----~~~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~l 355 (433)
T 1u2z_A 307 LKKSFVDNNR---VA-----ELIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKI 355 (433)
T ss_dssp ESSCSTTCHH---HH-----HHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEE
T ss_pred EcCccccccc---cc-----cccCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEE
Confidence 9875532110 00 0125689999974432111 1334667777764
No 195
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.17 E-value=7.6e-11 Score=100.83 Aligned_cols=113 Identities=13% Similarity=0.165 Sum_probs=80.4
Q ss_pred cCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCcc
Q 023482 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFV 197 (281)
Q Consensus 124 ~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~ 197 (281)
...+.....+...+...++.+|||||||+|+++..++.. +.+|+++|+++.+++.|++++... ++++++++|+.
T Consensus 55 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~ 134 (232)
T 3cbg_A 55 QISPEQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPAL 134 (232)
T ss_dssp SCCHHHHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH
T ss_pred CcCHHHHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 345555555555455556789999999999999999986 569999999999999999987543 26999999986
Q ss_pred ccccccchhhHHHhhcCC--CCccEEEEcCCCcccHHH---HHHhccCCCCc
Q 023482 198 KCHIRSHMLSLFERRKSS--SGFAKVVANIPFNISTDV---IKQLLPMGDIF 244 (281)
Q Consensus 198 ~~~~~d~~~d~v~~~~~~--~~~d~Vi~n~P~~~~~~~---~~~ll~~~~~~ 244 (281)
+.... +. ... +.||+|+.+.+....... +.++++++|.+
T Consensus 135 ~~l~~-----l~---~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~l 178 (232)
T 3cbg_A 135 ATLEQ-----LT---QGKPLPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLM 178 (232)
T ss_dssp HHHHH-----HH---TSSSCCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEE
T ss_pred HHHHH-----HH---hcCCCCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEE
Confidence 53100 00 112 679999998764333333 34667777654
No 196
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.17 E-value=2.2e-11 Score=111.96 Aligned_cols=80 Identities=20% Similarity=0.192 Sum_probs=66.8
Q ss_pred CCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCC--CeEEEEcCccccccccchhhHHHhhcCCCCc
Q 023482 141 EGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID--QLKVLQEDFVKCHIRSHMLSLFERRKSSSGF 218 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~--~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~ 218 (281)
++.+|||+|||+|.++..++..+.+|+|+|+++.+++.|+++...++ +++++++|+.+.... +. .....|
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~-----~~---~~~~~f 280 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRR-----LE---KEGERF 280 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHH-----HH---HTTCCE
T ss_pred CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHH-----HH---hcCCCe
Confidence 67799999999999999999886799999999999999999987654 699999999875311 00 124689
Q ss_pred cEEEEcCCCc
Q 023482 219 AKVVANIPFN 228 (281)
Q Consensus 219 d~Vi~n~P~~ 228 (281)
|+|+.|||+.
T Consensus 281 D~Ii~dpP~~ 290 (382)
T 1wxx_A 281 DLVVLDPPAF 290 (382)
T ss_dssp EEEEECCCCS
T ss_pred eEEEECCCCC
Confidence 9999999984
No 197
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.16 E-value=6.2e-11 Score=104.92 Aligned_cols=45 Identities=20% Similarity=0.368 Sum_probs=40.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcC
Q 023482 141 EGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFAS 185 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~ 185 (281)
++.+|||||||+|.++..++.. +.+|+|||+|+.+++.|++++..
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~ 92 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRH 92 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC--
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHh
Confidence 6789999999999999999997 57999999999999999988653
No 198
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=99.16 E-value=3.7e-11 Score=115.20 Aligned_cols=103 Identities=17% Similarity=0.116 Sum_probs=81.8
Q ss_pred CCCcccCccccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc-----------------CCEEEEEeCCHHHH
Q 023482 114 FPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-----------------GATVLAIEKDQHMV 176 (281)
Q Consensus 114 ~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~-----------------~~~v~gvD~s~~~l 176 (281)
..++..|+ |++++.+++.|++.+.+.++ +|||.+||+|.+...+++. ..+++|+|+++.++
T Consensus 219 ~~~k~~G~-fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~ 296 (544)
T 3khk_A 219 AEGKQGGQ-YYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTW 296 (544)
T ss_dssp TTTCCSTT-TCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHH
T ss_pred hhCccCCe-EeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHH
Confidence 34455677 99999999999999988766 9999999999998877542 34899999999999
Q ss_pred HHHHHHhcCCC---CeEEEEcCccccccccchhhHHHhhcCCCCccEEEEcCCCcc
Q 023482 177 GLVRERFASID---QLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNI 229 (281)
Q Consensus 177 ~~a~~~~~~~~---~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~ 229 (281)
..|+.++.-.+ ++.+.++|....+. .....||+|++||||..
T Consensus 297 ~lA~~Nl~l~gi~~~i~i~~gDtL~~~~-----------~~~~~fD~Iv~NPPf~~ 341 (544)
T 3khk_A 297 KLAAMNMVIRGIDFNFGKKNADSFLDDQ-----------HPDLRADFVMTNPPFNM 341 (544)
T ss_dssp HHHHHHHHHTTCCCBCCSSSCCTTTSCS-----------CTTCCEEEEEECCCSSC
T ss_pred HHHHHHHHHhCCCcccceeccchhcCcc-----------cccccccEEEECCCcCC
Confidence 99998875433 44448888776542 22368999999999974
No 199
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.16 E-value=3.2e-11 Score=105.09 Aligned_cols=101 Identities=13% Similarity=0.115 Sum_probs=72.9
Q ss_pred cCCCCCEEEEEcCCccHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCC-----------------------------
Q 023482 138 AVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASID----------------------------- 187 (281)
Q Consensus 138 ~~~~~~~VLDiGcG~G~~t~~la~~~~-~v~gvD~s~~~l~~a~~~~~~~~----------------------------- 187 (281)
...++.+|||||||+|.++..++..++ +|+|+|+|+.|++.|++++....
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 345678999999999998888877775 79999999999999998764321
Q ss_pred --CeE-EEEcCcccc-ccccchhhHHHhhcCCCCccEEEEcCCCccc-------HHHH---HHhccCCCCcceE
Q 023482 188 --QLK-VLQEDFVKC-HIRSHMLSLFERRKSSSGFAKVVANIPFNIS-------TDVI---KQLLPMGDIFSEV 247 (281)
Q Consensus 188 --~v~-~~~gD~~~~-~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~-------~~~~---~~ll~~~~~~~~~ 247 (281)
+++ ++++|+.+. |+.. ...++||+|+++.-++.. ...+ .++|++||.+-..
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~---------~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~ 196 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAP---------AVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTT 196 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTT---------CCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred HhhhheEEeccccCCCCCCc---------cccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 243 899999884 3221 123689999998655431 1233 3888999877444
No 200
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.15 E-value=1.2e-10 Score=100.89 Aligned_cols=90 Identities=21% Similarity=0.298 Sum_probs=70.8
Q ss_pred CCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCCccE
Q 023482 141 EGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAK 220 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~ 220 (281)
++.+|||||||+|.++..+++.+.+|+|+|+++.+++.|+++... + ++++|+.++++.+ +.||+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~--~--~~~~d~~~~~~~~------------~~fD~ 117 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGVK--N--VVEAKAEDLPFPS------------GAFEA 117 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTCS--C--EEECCTTSCCSCT------------TCEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcCC--C--EEECcHHHCCCCC------------CCEEE
Confidence 678999999999999999999988999999999999999988762 2 8999999887533 67999
Q ss_pred EEEcCCC-cc---cH---HHHHHhccCCCCcce
Q 023482 221 VVANIPF-NI---ST---DVIKQLLPMGDIFSE 246 (281)
Q Consensus 221 Vi~n~P~-~~---~~---~~~~~ll~~~~~~~~ 246 (281)
|+++... ++ .. ..+.++++++|.+..
T Consensus 118 v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 150 (260)
T 2avn_A 118 VLALGDVLSYVENKDKAFSEIRRVLVPDGLLIA 150 (260)
T ss_dssp EEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEcchhhhccccHHHHHHHHHHHcCCCeEEEE
Confidence 9986432 22 12 233577788876643
No 201
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.15 E-value=1.5e-10 Score=109.41 Aligned_cols=101 Identities=17% Similarity=0.204 Sum_probs=78.0
Q ss_pred HHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCccccccccch
Q 023482 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG-ATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRSHM 205 (281)
Q Consensus 130 ~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~-~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~~~~~~d~~ 205 (281)
.+.+++.+...++.+|||||||+|.++..+++.+ .+|+|+|+++ +++.|++++..+ ++++++++|+.+++++
T Consensus 147 ~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~--- 222 (480)
T 3b3j_A 147 QRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP--- 222 (480)
T ss_dssp HHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS---
T ss_pred HHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccC---
Confidence 4456666666678899999999999999999885 4999999998 999999887654 4899999999987532
Q ss_pred hhHHHhhcCCCCccEEEEcCCC-ccc----HHHH---HHhccCCCCc
Q 023482 206 LSLFERRKSSSGFAKVVANIPF-NIS----TDVI---KQLLPMGDIF 244 (281)
Q Consensus 206 ~d~v~~~~~~~~~d~Vi~n~P~-~~~----~~~~---~~ll~~~~~~ 244 (281)
+.||+|+++++. +.. ...+ .++++++|.+
T Consensus 223 ----------~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~l 259 (480)
T 3b3j_A 223 ----------EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNM 259 (480)
T ss_dssp ----------SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEE
T ss_pred ----------CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEE
Confidence 579999999883 322 1222 3667777765
No 202
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.14 E-value=2.2e-10 Score=102.01 Aligned_cols=113 Identities=12% Similarity=0.127 Sum_probs=79.2
Q ss_pred HHHHHHHHhcC--CCCCEEEEEcCCccHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCC---------CCeEEEEcCc
Q 023482 129 INDQLAAAAAV--QEGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASI---------DQLKVLQEDF 196 (281)
Q Consensus 129 ~~~~l~~~l~~--~~~~~VLDiGcG~G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~~~~~---------~~v~~~~gD~ 196 (281)
++..+++.+.. .++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.|+++.... .+++++++|+
T Consensus 20 l~~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~ 99 (313)
T 3bgv_A 20 LIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADS 99 (313)
T ss_dssp HHHHHHHHHHHTC--CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCT
T ss_pred HHHHHHHHhhhccCCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecc
Confidence 33444444432 26779999999999999999876 569999999999999999887532 3799999999
Q ss_pred cccccccchhhHHHhhcCCCCccEEEEcCCCccc-------HHHH---HHhccCCCCcceE
Q 023482 197 VKCHIRSHMLSLFERRKSSSGFAKVVANIPFNIS-------TDVI---KQLLPMGDIFSEV 247 (281)
Q Consensus 197 ~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~-------~~~~---~~ll~~~~~~~~~ 247 (281)
.++++.+... ...+.||+|+++..+++. ..++ .++++++|.+-..
T Consensus 100 ~~~~~~~~~~------~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (313)
T 3bgv_A 100 SKELLIDKFR------DPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGT 154 (313)
T ss_dssp TTSCSTTTCS------STTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cccchhhhcc------cCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 9876211000 123589999999877664 1222 3667888776433
No 203
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.13 E-value=4.3e-11 Score=110.56 Aligned_cols=78 Identities=15% Similarity=0.211 Sum_probs=66.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC----CCeEEEEcCcccc-ccccchhhHHHhhcCC
Q 023482 141 EGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI----DQLKVLQEDFVKC-HIRSHMLSLFERRKSS 215 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~----~~v~~~~gD~~~~-~~~d~~~d~v~~~~~~ 215 (281)
++.+|||+|||+|..+..++..+.+|++||+|+.+++.|+.|.... ++++++++|+.+. +. ...
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~-----------~~~ 161 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPL-----------IKT 161 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHH-----------HHH
T ss_pred CCCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhh-----------ccC
Confidence 4789999999999999999998899999999999999999998744 4799999999874 21 011
Q ss_pred CCccEEEEcCCCcc
Q 023482 216 SGFAKVVANIPFNI 229 (281)
Q Consensus 216 ~~~d~Vi~n~P~~~ 229 (281)
..||+|+.||||..
T Consensus 162 ~~fDvV~lDPPrr~ 175 (410)
T 3ll7_A 162 FHPDYIYVDPARRS 175 (410)
T ss_dssp HCCSEEEECCEEC-
T ss_pred CCceEEEECCCCcC
Confidence 47999999999975
No 204
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.12 E-value=5.1e-10 Score=98.51 Aligned_cols=110 Identities=23% Similarity=0.262 Sum_probs=74.9
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCC-EEEEEeC-CHHHHHHHHHHh-----cCC-------CCeEEEEc
Q 023482 129 INDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEK-DQHMVGLVRERF-----ASI-------DQLKVLQE 194 (281)
Q Consensus 129 ~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~-~v~gvD~-s~~~l~~a~~~~-----~~~-------~~v~~~~g 194 (281)
+.+.+.......++.+|||+|||+|.++..++..+. +|+|+|+ ++.+++.|+++. ... ++++++..
T Consensus 67 l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~ 146 (281)
T 3bzb_A 67 LADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPY 146 (281)
T ss_dssp HHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEEC
T ss_pred HHHHHHhcchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEe
Confidence 445555555455778999999999999999999876 9999999 899999999998 332 26778766
Q ss_pred CccccccccchhhHHHhhcCCCCccEEEE-cCCCccc--H---HHHHHhcc---C--CCCc
Q 023482 195 DFVKCHIRSHMLSLFERRKSSSGFAKVVA-NIPFNIS--T---DVIKQLLP---M--GDIF 244 (281)
Q Consensus 195 D~~~~~~~d~~~d~v~~~~~~~~~d~Vi~-n~P~~~~--~---~~~~~ll~---~--~~~~ 244 (281)
|..+..- ++... ...+.||+|++ +..|+.. . ..+.++++ + +|.+
T Consensus 147 ~~~~~~~-----~~~~~-~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l 201 (281)
T 3bzb_A 147 RWGDSPD-----SLQRC-TGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVA 201 (281)
T ss_dssp CTTSCTH-----HHHHH-HSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEE
T ss_pred cCCCccH-----HHHhh-ccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEE
Confidence 6544210 11100 02468999997 6666542 1 33457777 7 7754
No 205
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.12 E-value=2.4e-10 Score=112.83 Aligned_cols=92 Identities=15% Similarity=0.190 Sum_probs=72.1
Q ss_pred cCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCC----CeEEEEcCccc
Q 023482 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASID----QLKVLQEDFVK 198 (281)
Q Consensus 124 ~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~-~v~gvD~s~~~l~~a~~~~~~~~----~v~~~~gD~~~ 198 (281)
+.++.....++..+. ++.+|||+|||+|.++..++..++ +|++||+|+.+++.|++|+..++ +++++++|+.+
T Consensus 524 f~d~r~~r~~l~~~~--~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~ 601 (703)
T 3v97_A 524 FLDHRIARRMLGQMS--KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLA 601 (703)
T ss_dssp CGGGHHHHHHHHHHC--TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHH
T ss_pred cccHHHHHHHHHHhc--CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHH
Confidence 334444444444433 678999999999999999998866 79999999999999999987553 79999999987
Q ss_pred cccccchhhHHHhhcCCCCccEEEEcCCCc
Q 023482 199 CHIRSHMLSLFERRKSSSGFAKVVANIPFN 228 (281)
Q Consensus 199 ~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~ 228 (281)
... ...+.||+|++|||+.
T Consensus 602 ~l~-----------~~~~~fD~Ii~DPP~f 620 (703)
T 3v97_A 602 WLR-----------EANEQFDLIFIDPPTF 620 (703)
T ss_dssp HHH-----------HCCCCEEEEEECCCSB
T ss_pred HHH-----------hcCCCccEEEECCccc
Confidence 421 2236899999999974
No 206
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.12 E-value=1e-10 Score=103.88 Aligned_cols=95 Identities=22% Similarity=0.318 Sum_probs=70.3
Q ss_pred CCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcC-------CCCeEEEEcCccccccccchhhHHH
Q 023482 140 QEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFAS-------IDQLKVLQEDFVKCHIRSHMLSLFE 210 (281)
Q Consensus 140 ~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~-------~~~v~~~~gD~~~~~~~d~~~d~v~ 210 (281)
.++.+|||||||+|.++..+++. ..+|++||+|+.+++.|++++.. .++++++.+|+.+...
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~--------- 152 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVN--------- 152 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC------------
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHh---------
Confidence 35679999999999999999987 46999999999999999998752 2489999999987521
Q ss_pred hhcCCCCccEEEEcCCCccc-------H---HHHHHhccCCCCcc
Q 023482 211 RRKSSSGFAKVVANIPFNIS-------T---DVIKQLLPMGDIFS 245 (281)
Q Consensus 211 ~~~~~~~~d~Vi~n~P~~~~-------~---~~~~~ll~~~~~~~ 245 (281)
...+.||+||++++.... . ..+.++|+++|.+.
T Consensus 153 --~~~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv 195 (294)
T 3adn_A 153 --QTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFV 195 (294)
T ss_dssp --CCCCCEEEEEECC----------CCHHHHHHHHHTEEEEEEEE
T ss_pred --hcCCCccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEE
Confidence 224689999998654221 2 23457777777663
No 207
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.12 E-value=1.2e-10 Score=105.21 Aligned_cols=96 Identities=16% Similarity=0.232 Sum_probs=72.5
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcC------CCCeEEEEcCccccccccchhhHHH
Q 023482 139 VQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFAS------IDQLKVLQEDFVKCHIRSHMLSLFE 210 (281)
Q Consensus 139 ~~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~------~~~v~~~~gD~~~~~~~d~~~d~v~ 210 (281)
...+.+|||||||+|.++..+++. ..+|++||+|+.+++.|++++.. .++++++++|+.+....
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~-------- 189 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKN-------- 189 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHT--------
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHh--------
Confidence 346689999999999999999987 46999999999999999998753 25899999998764110
Q ss_pred hhcCCCCccEEEEcCC--Ccc-----cH---HHHHHhccCCCCc
Q 023482 211 RRKSSSGFAKVVANIP--FNI-----ST---DVIKQLLPMGDIF 244 (281)
Q Consensus 211 ~~~~~~~~d~Vi~n~P--~~~-----~~---~~~~~ll~~~~~~ 244 (281)
...+.||+|++|++ ... .. ..+.++|+++|.+
T Consensus 190 --~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~l 231 (334)
T 1xj5_A 190 --AAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVV 231 (334)
T ss_dssp --SCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEE
T ss_pred --ccCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEE
Confidence 12367999999875 221 12 2345777777765
No 208
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.12 E-value=1.2e-10 Score=102.61 Aligned_cols=111 Identities=14% Similarity=0.072 Sum_probs=75.0
Q ss_pred HHHHHHHhcC--CCCCEEEEEcCCccHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCCC-------------------
Q 023482 130 NDQLAAAAAV--QEGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASID------------------- 187 (281)
Q Consensus 130 ~~~l~~~l~~--~~~~~VLDiGcG~G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~~~~~~------------------- 187 (281)
...+.+.+.. .++.+|||||||+|..+..++.. +.+|+|+|+|+.|++.|++++....
T Consensus 58 ~~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~ 137 (289)
T 2g72_A 58 LRCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKG 137 (289)
T ss_dssp HHHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSC
T ss_pred HHHHHHHhCCCCCCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcc
Confidence 3445555433 36789999999999965545443 6799999999999999988654310
Q ss_pred -------------CeEEEEcCccc-cccccchhhHHHhhcCCCCccEEEEcCCCcc----cH------HHHHHhccCCCC
Q 023482 188 -------------QLKVLQEDFVK-CHIRSHMLSLFERRKSSSGFAKVVANIPFNI----ST------DVIKQLLPMGDI 243 (281)
Q Consensus 188 -------------~v~~~~gD~~~-~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~----~~------~~~~~ll~~~~~ 243 (281)
.++++.+|+.+ +|+.+.. ...++||+|+++..+++ .. ..+.++|++||.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-------~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~ 210 (289)
T 2g72_A 138 ECWQDKERQLRARVKRVLPIDVHQPQPLGAGS-------PAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGH 210 (289)
T ss_dssp CCHHHHHHHHHHHEEEEECCCTTSSSTTCSSC-------SSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEE
T ss_pred cchhhhHHHHHhhhceEEecccCCCCCccccc-------cCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCE
Confidence 15678889987 6543211 12356999999877655 21 223577888887
Q ss_pred cceE
Q 023482 244 FSEV 247 (281)
Q Consensus 244 ~~~~ 247 (281)
+...
T Consensus 211 l~~~ 214 (289)
T 2g72_A 211 LLLI 214 (289)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6443
No 209
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.11 E-value=1.4e-10 Score=103.49 Aligned_cols=96 Identities=15% Similarity=0.241 Sum_probs=72.7
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhcC------CCCeEEEEcCccccccccchhhHHH
Q 023482 139 VQEGDIVLEIGPGTGSLTNVLLNAG--ATVLAIEKDQHMVGLVRERFAS------IDQLKVLQEDFVKCHIRSHMLSLFE 210 (281)
Q Consensus 139 ~~~~~~VLDiGcG~G~~t~~la~~~--~~v~gvD~s~~~l~~a~~~~~~------~~~v~~~~gD~~~~~~~d~~~d~v~ 210 (281)
...+.+|||||||+|.++..+++.. .+|++||+|+.+++.|++++.. .++++++.+|+.+.-.
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~--------- 163 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMK--------- 163 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHH---------
T ss_pred CCCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHh---------
Confidence 3466899999999999999999873 6999999999999999998753 3589999999976310
Q ss_pred hhcCCCCccEEEEcCCCccc----------HHHHHHhccCCCCcc
Q 023482 211 RRKSSSGFAKVVANIPFNIS----------TDVIKQLLPMGDIFS 245 (281)
Q Consensus 211 ~~~~~~~~d~Vi~n~P~~~~----------~~~~~~ll~~~~~~~ 245 (281)
...+.||+||++++.... -..+.++++++|.+.
T Consensus 164 --~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv 206 (304)
T 2o07_A 164 --QNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLC 206 (304)
T ss_dssp --TCSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEE
T ss_pred --hCCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEE
Confidence 123679999998875322 233457777777663
No 210
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.11 E-value=9.8e-11 Score=101.11 Aligned_cols=100 Identities=11% Similarity=0.167 Sum_probs=75.0
Q ss_pred cCCCCCEEEEEcCCccHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCC----------------------------
Q 023482 138 AVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASIDQ---------------------------- 188 (281)
Q Consensus 138 ~~~~~~~VLDiGcG~G~~t~~la~~~~-~v~gvD~s~~~l~~a~~~~~~~~~---------------------------- 188 (281)
...++.+|||+|||+|.++..++..+. +|+|+|+++.+++.|+++....++
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 334667999999999999999998877 999999999999999998865432
Q ss_pred ---e-EEEEcCcccccc-ccchhhHHHhhcCCCCccEEEEcCCCc----c---cHHH---HHHhccCCCCcce
Q 023482 189 ---L-KVLQEDFVKCHI-RSHMLSLFERRKSSSGFAKVVANIPFN----I---STDV---IKQLLPMGDIFSE 246 (281)
Q Consensus 189 ---v-~~~~gD~~~~~~-~d~~~d~v~~~~~~~~~d~Vi~n~P~~----~---~~~~---~~~ll~~~~~~~~ 246 (281)
+ +++++|+.+.+. .+ ...+.||+|+++..++ . ...+ +.+++++||.+-.
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~---------~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 196 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGG---------VSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVM 196 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTT---------CCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred hhhheeEEEeeeccCCCCCc---------cccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEE
Confidence 7 999999988643 11 1226799999976554 2 1222 3467788876633
No 211
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.11 E-value=2.8e-10 Score=96.74 Aligned_cols=68 Identities=21% Similarity=0.331 Sum_probs=60.1
Q ss_pred CCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCCcc
Q 023482 140 QEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFA 219 (281)
Q Consensus 140 ~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d 219 (281)
.++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.|+++.. +++++++|+.++++ .+.||
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~---~~~~~~~d~~~~~~-------------~~~~D 102 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRLP---DATLHQGDMRDFRL-------------GRKFS 102 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHCT---TCEEEECCTTTCCC-------------SSCEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhCC---CCEEEECCHHHccc-------------CCCCc
Confidence 467899999999999999999987799999999999999998864 79999999998763 26799
Q ss_pred EEEE
Q 023482 220 KVVA 223 (281)
Q Consensus 220 ~Vi~ 223 (281)
+|++
T Consensus 103 ~v~~ 106 (239)
T 3bxo_A 103 AVVS 106 (239)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9995
No 212
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.11 E-value=8.1e-10 Score=97.02 Aligned_cols=123 Identities=15% Similarity=0.059 Sum_probs=82.8
Q ss_pred HHHHHHHHHHhc-CCCCCEEEEEcCCc---cHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccc
Q 023482 127 SEINDQLAAAAA-VQEGDIVLEIGPGT---GSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCH 200 (281)
Q Consensus 127 ~~~~~~l~~~l~-~~~~~~VLDiGcG~---G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~ 200 (281)
+.+...++..+. .....+|||||||+ |.++..+++. +.+|+++|+|+.|++.|++++...++++++++|+.+.+
T Consensus 62 ~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~ 141 (274)
T 2qe6_A 62 RKVLVRGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPE 141 (274)
T ss_dssp HHHHHHHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHH
T ss_pred hHHHHHHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCch
Confidence 345556666655 23447999999999 9988777664 67999999999999999999876569999999998753
Q ss_pred cccchhhHHHhhcCCCCccEEEEcCCCcccH-----HH---HHHhccCCCCcceEEEe
Q 023482 201 IRSHMLSLFERRKSSSGFAKVVANIPFNIST-----DV---IKQLLPMGDIFSEVVLL 250 (281)
Q Consensus 201 ~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~-----~~---~~~ll~~~~~~~~~~~~ 250 (281)
..-..-+.-.. ...+.||+|+++.-+++.. .+ +.+.+++|+.+......
T Consensus 142 ~~~~~~~~~~~-~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 142 YILNHPDVRRM-IDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp HHHHSHHHHHH-CCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEB
T ss_pred hhhccchhhcc-CCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 11000000000 1224789999986554322 23 34777888887555543
No 213
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.10 E-value=1.6e-10 Score=101.64 Aligned_cols=93 Identities=17% Similarity=0.242 Sum_probs=72.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHc-C-CEEEEEeCCHHHHHHHHHHhcC------CCCeEEEEcCccccccccchhhHHHhh
Q 023482 141 EGDIVLEIGPGTGSLTNVLLNA-G-ATVLAIEKDQHMVGLVRERFAS------IDQLKVLQEDFVKCHIRSHMLSLFERR 212 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~la~~-~-~~v~gvD~s~~~l~~a~~~~~~------~~~v~~~~gD~~~~~~~d~~~d~v~~~ 212 (281)
.+.+|||||||+|.++..+++. + .+|++||+|+.+++.|++++.. .++++++.+|+.+.-.
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~----------- 143 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIA----------- 143 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHH-----------
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHh-----------
Confidence 5679999999999999999987 4 6999999999999999998732 2489999999876310
Q ss_pred cCCCCccEEEEcCCCccc----------HHHHHHhccCCCCc
Q 023482 213 KSSSGFAKVVANIPFNIS----------TDVIKQLLPMGDIF 244 (281)
Q Consensus 213 ~~~~~~d~Vi~n~P~~~~----------~~~~~~ll~~~~~~ 244 (281)
...+.||+|+++++.... -..+.++++++|.+
T Consensus 144 ~~~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~l 185 (275)
T 1iy9_A 144 KSENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIF 185 (275)
T ss_dssp TCCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEE
T ss_pred hCCCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEE
Confidence 123679999999876321 23445777777765
No 214
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.09 E-value=3.1e-10 Score=97.01 Aligned_cols=62 Identities=16% Similarity=0.154 Sum_probs=55.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCccccccc
Q 023482 141 EGDIVLEIGPGTGSLTNVLLNAG--ATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIR 202 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~la~~~--~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~~~~~ 202 (281)
++.+|||||||+|++++.++..+ .+|+|+|+++.+++.|++|+..++ ++++.++|..+...+
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~ 87 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEE 87 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG
T ss_pred CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccc
Confidence 67899999999999999999985 389999999999999999998664 799999999887543
No 215
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.09 E-value=1.9e-10 Score=103.00 Aligned_cols=95 Identities=15% Similarity=0.276 Sum_probs=74.4
Q ss_pred CCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcC-------CCCeEEEEcCccccccccchhhHHH
Q 023482 140 QEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFAS-------IDQLKVLQEDFVKCHIRSHMLSLFE 210 (281)
Q Consensus 140 ~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~-------~~~v~~~~gD~~~~~~~d~~~d~v~ 210 (281)
..+.+|||||||+|.++..+++. +.+|++||+|+.+++.|++++.. .++++++.+|+.+...
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~--------- 146 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLE--------- 146 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHH---------
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHH---------
Confidence 45679999999999999999987 46999999999999999998753 3589999999987410
Q ss_pred hhcCCCCccEEEEcCCCcc---c-------HH---HHHHhccCCCCcc
Q 023482 211 RRKSSSGFAKVVANIPFNI---S-------TD---VIKQLLPMGDIFS 245 (281)
Q Consensus 211 ~~~~~~~~d~Vi~n~P~~~---~-------~~---~~~~ll~~~~~~~ 245 (281)
...+.||+|+++++... . .. .+.++++++|.+.
T Consensus 147 --~~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv 192 (314)
T 1uir_A 147 --RTEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMG 192 (314)
T ss_dssp --HCCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEE
T ss_pred --hcCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEE
Confidence 22467999999987755 1 23 3457777777664
No 216
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=99.09 E-value=1e-10 Score=101.83 Aligned_cols=89 Identities=17% Similarity=0.262 Sum_probs=68.6
Q ss_pred HHHHHHhcCCCC--CEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC----------C-CCeEEEEcCcc
Q 023482 131 DQLAAAAAVQEG--DIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFAS----------I-DQLKVLQEDFV 197 (281)
Q Consensus 131 ~~l~~~l~~~~~--~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~----------~-~~v~~~~gD~~ 197 (281)
+.+.+.+.+.++ .+|||+|||+|..+..++..+++|++||+++.+++.++.+++. . .+++++++|+.
T Consensus 76 e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~ 155 (258)
T 2oyr_A 76 EAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSL 155 (258)
T ss_dssp SHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHH
T ss_pred HHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHH
Confidence 345566666677 8999999999999999999988999999999886666655421 1 36999999998
Q ss_pred ccccccchhhHHHhhcCCCCccEEEEcCCCccc
Q 023482 198 KCHIRSHMLSLFERRKSSSGFAKVVANIPFNIS 230 (281)
Q Consensus 198 ~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~ 230 (281)
++-- ...+.||+|+.||||...
T Consensus 156 ~~L~-----------~~~~~fDvV~lDP~y~~~ 177 (258)
T 2oyr_A 156 TALT-----------DITPRPQVVYLDPMFPHK 177 (258)
T ss_dssp HHST-----------TCSSCCSEEEECCCCCCC
T ss_pred HHHH-----------hCcccCCEEEEcCCCCCc
Confidence 7421 112469999999999653
No 217
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.09 E-value=3.1e-10 Score=97.82 Aligned_cols=61 Identities=13% Similarity=0.095 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCccHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCcccccc
Q 023482 141 EGDIVLEIGPGTGSLTNVLLNAG--ATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHI 201 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~la~~~--~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~~~~ 201 (281)
++.+|||||||+|++++.++..+ .+|+|+|+++.+++.|++|+..++ ++++..+|..+...
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~ 86 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIE 86 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccC
Confidence 67899999999999999999985 389999999999999999987664 69999999988654
No 218
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.09 E-value=3.2e-10 Score=101.10 Aligned_cols=95 Identities=15% Similarity=0.171 Sum_probs=72.0
Q ss_pred CCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhc------CCCCeEEEEcCccccccccchhhHHHh
Q 023482 140 QEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFA------SIDQLKVLQEDFVKCHIRSHMLSLFER 211 (281)
Q Consensus 140 ~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~------~~~~v~~~~gD~~~~~~~d~~~d~v~~ 211 (281)
.++.+|||||||+|.++..+++. ..+|++||+|+.+++.|++++. ..++++++.+|+.+.+..
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~--------- 164 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQ--------- 164 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHS---------
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHh---------
Confidence 46689999999999999999987 4699999999999999998873 124899999999876421
Q ss_pred hcCCCCccEEEEcCCCccc-------H---HHHHHhccCCCCc
Q 023482 212 RKSSSGFAKVVANIPFNIS-------T---DVIKQLLPMGDIF 244 (281)
Q Consensus 212 ~~~~~~~d~Vi~n~P~~~~-------~---~~~~~ll~~~~~~ 244 (281)
...+.||+|+++.+.... . ..+.++++++|.+
T Consensus 165 -~~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~l 206 (304)
T 3bwc_A 165 -TPDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGIC 206 (304)
T ss_dssp -SCTTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEE
T ss_pred -ccCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEE
Confidence 024689999998765432 1 2335777777765
No 219
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.09 E-value=2.6e-10 Score=101.99 Aligned_cols=96 Identities=14% Similarity=0.152 Sum_probs=76.2
Q ss_pred cCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCCC--CeEEEEcCccc
Q 023482 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASID--QLKVLQEDFVK 198 (281)
Q Consensus 124 ~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~~--~v~~~~gD~~~ 198 (281)
+.+......+...+.+.++.+|||+|||+|..+..++.. ..+|+|+|+++.+++.+++++++.+ +++++++|+.+
T Consensus 85 ~~Qd~~s~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~ 164 (309)
T 2b9e_A 85 ILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLA 164 (309)
T ss_dssp EECCTGGGHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGG
T ss_pred EEECHHHHHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHh
Confidence 333333445556677888999999999999999999985 3699999999999999999998664 89999999988
Q ss_pred cccccchhhHHHhhcCCCCccEEEEcCCCc
Q 023482 199 CHIRSHMLSLFERRKSSSGFAKVVANIPFN 228 (281)
Q Consensus 199 ~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~ 228 (281)
++..+ .....||.|+.++|+.
T Consensus 165 ~~~~~---------~~~~~fD~Vl~D~PcS 185 (309)
T 2b9e_A 165 VSPSD---------PRYHEVHYILLDPSCS 185 (309)
T ss_dssp SCTTC---------GGGTTEEEEEECCCCC
T ss_pred cCccc---------cccCCCCEEEEcCCcC
Confidence 75321 1114699999999973
No 220
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=99.08 E-value=4.6e-10 Score=107.39 Aligned_cols=103 Identities=16% Similarity=0.223 Sum_probs=83.0
Q ss_pred cccCccccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc---------------CCEEEEEeCCHHHHHHHHH
Q 023482 117 KSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---------------GATVLAIEKDQHMVGLVRE 181 (281)
Q Consensus 117 ~~~g~~~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~---------------~~~v~gvD~s~~~l~~a~~ 181 (281)
...|+ |++++.+++.|++.+.+.++.+|+|.+||+|.+...+.+. ...++|+|+++.++..|+.
T Consensus 194 g~~Gq-fyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~m 272 (530)
T 3ufb_A 194 GDSGE-FYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQM 272 (530)
T ss_dssp SSCCC-CCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHH
T ss_pred CcCce-ECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHH
Confidence 34577 9999999999999999999999999999999998877542 2469999999999999987
Q ss_pred HhcC--CCCeEEEEcCccccccccchhhHHHhhcCCCCccEEEEcCCCc
Q 023482 182 RFAS--IDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFN 228 (281)
Q Consensus 182 ~~~~--~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~ 228 (281)
+.-- .+...+.++|....+..+. .....||+|++||||.
T Consensus 273 Nl~lhg~~~~~I~~~dtL~~~~~~~--------~~~~~fD~Il~NPPf~ 313 (530)
T 3ufb_A 273 NLLLHGLEYPRIDPENSLRFPLREM--------GDKDRVDVILTNPPFG 313 (530)
T ss_dssp HHHHHTCSCCEEECSCTTCSCGGGC--------CGGGCBSEEEECCCSS
T ss_pred HHHhcCCccccccccccccCchhhh--------cccccceEEEecCCCC
Confidence 7542 2356788999887664321 2235799999999995
No 221
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.08 E-value=2.1e-10 Score=103.11 Aligned_cols=94 Identities=17% Similarity=0.224 Sum_probs=72.1
Q ss_pred CCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcC------CCCeEEEEcCccccccccchhhHHHh
Q 023482 140 QEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFAS------IDQLKVLQEDFVKCHIRSHMLSLFER 211 (281)
Q Consensus 140 ~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~------~~~v~~~~gD~~~~~~~d~~~d~v~~ 211 (281)
..+.+|||||||+|.++..+++. +.+|+++|+|+.+++.|++++.. .++++++++|+.+...
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~---------- 184 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLE---------- 184 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHH----------
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHh----------
Confidence 45679999999999999999987 46999999999999999999865 3489999999876311
Q ss_pred hcCCCCccEEEEcCC--Cccc-----HH---HHHHhccCCCCc
Q 023482 212 RKSSSGFAKVVANIP--FNIS-----TD---VIKQLLPMGDIF 244 (281)
Q Consensus 212 ~~~~~~~d~Vi~n~P--~~~~-----~~---~~~~ll~~~~~~ 244 (281)
...+.||+|++|++ +... .. .+.++++++|.+
T Consensus 185 -~~~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~l 226 (321)
T 2pt6_A 185 -NVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYC 226 (321)
T ss_dssp -HCCSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEE
T ss_pred -hcCCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEE
Confidence 12367999999873 3211 22 334677777765
No 222
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.08 E-value=5.9e-10 Score=110.01 Aligned_cols=97 Identities=12% Similarity=0.155 Sum_probs=80.1
Q ss_pred ccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcC---------------------------------------
Q 023482 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG--------------------------------------- 163 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~--------------------------------------- 163 (281)
-.....++..++......++..|||++||+|.+++.++..+
T Consensus 172 apl~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~ 251 (703)
T 3v97_A 172 APIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKG 251 (703)
T ss_dssp CSSCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhc
Confidence 34567888899999888888899999999999998877542
Q ss_pred -----CEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCccccccccchhhHHHhhcCCCCccEEEEcCCCcc
Q 023482 164 -----ATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNI 229 (281)
Q Consensus 164 -----~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~ 229 (281)
.+|+|+|+|+.+++.|+.|...++ .+++.++|+.++..+ ...+.+|+||+||||..
T Consensus 252 ~~~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~----------~~~~~~d~Iv~NPPYG~ 315 (703)
T 3v97_A 252 LAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP----------LPKGPYGTVLSNPPYGE 315 (703)
T ss_dssp HHHCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCS----------CTTCCCCEEEECCCCCC
T ss_pred cccCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccc----------cccCCCCEEEeCCCccc
Confidence 479999999999999999987665 599999999987422 11237999999999975
No 223
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.07 E-value=6e-11 Score=111.43 Aligned_cols=95 Identities=20% Similarity=0.205 Sum_probs=76.1
Q ss_pred ccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCCC-CeEEEEcCccc
Q 023482 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVK 198 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~~-~v~~~~gD~~~ 198 (281)
++.+......+...+.+.++.+|||+|||+|..+..+++. .++|+|+|+++.+++.+++++.+.+ .++++++|+.+
T Consensus 83 ~~vQd~ss~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~ 162 (464)
T 3m6w_A 83 YYIQEPSAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRA 162 (464)
T ss_dssp EEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHH
T ss_pred EEEECHHHHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHH
Confidence 4444444555666778888999999999999999999976 3699999999999999999987543 48999999987
Q ss_pred cccccchhhHHHhhcCCCCccEEEEcCCCc
Q 023482 199 CHIRSHMLSLFERRKSSSGFAKVVANIPFN 228 (281)
Q Consensus 199 ~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~ 228 (281)
++. ...+.||+|+.|+|+.
T Consensus 163 l~~-----------~~~~~FD~Il~D~PcS 181 (464)
T 3m6w_A 163 LAE-----------AFGTYFHRVLLDAPCS 181 (464)
T ss_dssp HHH-----------HHCSCEEEEEEECCCC
T ss_pred hhh-----------hccccCCEEEECCCcC
Confidence 641 1236899999999973
No 224
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.07 E-value=2.6e-10 Score=101.28 Aligned_cols=94 Identities=15% Similarity=0.163 Sum_probs=70.0
Q ss_pred CCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcC------CCCeEEEEcCccccccccchhhHHHh
Q 023482 140 QEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFAS------IDQLKVLQEDFVKCHIRSHMLSLFER 211 (281)
Q Consensus 140 ~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~------~~~v~~~~gD~~~~~~~d~~~d~v~~ 211 (281)
..+.+|||||||+|.++..+++. ..+|+++|+|+.+++.|++++.. .++++++++|+.+...
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~---------- 158 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVR---------- 158 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGG----------
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHh----------
Confidence 35679999999999999999987 46999999999999999998742 3589999999876421
Q ss_pred hcCCCCccEEEEcCCCc-c-------cH---HHHHHhccCCCCc
Q 023482 212 RKSSSGFAKVVANIPFN-I-------ST---DVIKQLLPMGDIF 244 (281)
Q Consensus 212 ~~~~~~~d~Vi~n~P~~-~-------~~---~~~~~ll~~~~~~ 244 (281)
...+.||+|++++|.. . .. ..+.++++++|.+
T Consensus 159 -~~~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~l 201 (296)
T 1inl_A 159 -KFKNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVF 201 (296)
T ss_dssp -GCSSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEE
T ss_pred -hCCCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEE
Confidence 1236799999987643 1 12 2334677777755
No 225
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.06 E-value=4.6e-10 Score=95.69 Aligned_cols=58 Identities=17% Similarity=0.221 Sum_probs=52.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCccc
Q 023482 141 EGDIVLEIGPGTGSLTNVLLNAG--ATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVK 198 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~la~~~--~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~ 198 (281)
++.+|||||||+|++++.++..+ .+|+|+|+++.+++.|++|...++ ++++..+|+.+
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~ 77 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLA 77 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhh
Confidence 67799999999999999999985 489999999999999999998664 69999999865
No 226
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.05 E-value=9.3e-10 Score=91.47 Aligned_cols=97 Identities=22% Similarity=0.331 Sum_probs=68.3
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCCc
Q 023482 139 VQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGF 218 (281)
Q Consensus 139 ~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~ 218 (281)
+.++.+|||+|||+|.++..+++.+++|+|||+++.. ...+++++++|+.+.+..+...+.+.. ...+.|
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~---------~~~~v~~~~~D~~~~~~~~~~~~~~~~-~~~~~~ 92 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEME---------EIAGVRFIRCDIFKETIFDDIDRALRE-EGIEKV 92 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCC---------CCTTCEEEECCTTSSSHHHHHHHHHHH-HTCSSE
T ss_pred CCCCCEEEEEeecCCHHHHHHHHcCCcEEEEeccccc---------cCCCeEEEEccccCHHHHHHHHHHhhc-ccCCcc
Confidence 3577899999999999999999998899999999741 224899999999886543322222110 011389
Q ss_pred cEEEEcCCCccc----H-------------HHHHHhccCCCCcc
Q 023482 219 AKVVANIPFNIS----T-------------DVIKQLLPMGDIFS 245 (281)
Q Consensus 219 d~Vi~n~P~~~~----~-------------~~~~~ll~~~~~~~ 245 (281)
|+|++|++.... . ....++|++||.+-
T Consensus 93 D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv 136 (191)
T 3dou_A 93 DDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVL 136 (191)
T ss_dssp EEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred eEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEE
Confidence 999999765321 1 12247788888774
No 227
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.05 E-value=3.6e-10 Score=99.97 Aligned_cols=106 Identities=19% Similarity=0.225 Sum_probs=74.0
Q ss_pred HHHHHHHHhcCC-CCCEEEEEcCCccHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEE-EcCccccccccch
Q 023482 129 INDQLAAAAAVQ-EGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASIDQLKVL-QEDFVKCHIRSHM 205 (281)
Q Consensus 129 ~~~~l~~~l~~~-~~~~VLDiGcG~G~~t~~la~~~~-~v~gvD~s~~~l~~a~~~~~~~~~v~~~-~gD~~~~~~~d~~ 205 (281)
-+..+++.+.+. ++.+|||+|||||.++..+++.++ +|+|||+++.|++.+.++. .++... ..|+..++..+
T Consensus 72 Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~---~rv~~~~~~ni~~l~~~~-- 146 (291)
T 3hp7_A 72 KLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQD---DRVRSMEQYNFRYAEPVD-- 146 (291)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTC---TTEEEECSCCGGGCCGGG--
T ss_pred HHHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC---cccceecccCceecchhh--
Confidence 345566666654 567999999999999999999865 9999999999999865432 244333 34555554321
Q ss_pred hhHHHhhcCCCCccEEEEcCCCccc---HHHHHHhccCCCCcce
Q 023482 206 LSLFERRKSSSGFAKVVANIPFNIS---TDVIKQLLPMGDIFSE 246 (281)
Q Consensus 206 ~d~v~~~~~~~~~d~Vi~n~P~~~~---~~~~~~ll~~~~~~~~ 246 (281)
.....||.|+++.-|... -+.+.++++++|.+-.
T Consensus 147 -------l~~~~fD~v~~d~sf~sl~~vL~e~~rvLkpGG~lv~ 183 (291)
T 3hp7_A 147 -------FTEGLPSFASIDVSFISLNLILPALAKILVDGGQVVA 183 (291)
T ss_dssp -------CTTCCCSEEEECCSSSCGGGTHHHHHHHSCTTCEEEE
T ss_pred -------CCCCCCCEEEEEeeHhhHHHHHHHHHHHcCcCCEEEE
Confidence 122458999998776543 3556789999987633
No 228
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.05 E-value=4.3e-10 Score=105.56 Aligned_cols=94 Identities=16% Similarity=0.209 Sum_probs=76.0
Q ss_pred CCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc--C-CEEEEEeCCHHHHHHHHHHhcCCC--CeEEEEcCcccc
Q 023482 125 LNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--G-ATVLAIEKDQHMVGLVRERFASID--QLKVLQEDFVKC 199 (281)
Q Consensus 125 ~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~--~-~~v~gvD~s~~~l~~a~~~~~~~~--~v~~~~gD~~~~ 199 (281)
.+......+...+.+.++.+|||+|||+|..+..++.. + .+|+|+|+++.+++.++++....+ +++++++|+.++
T Consensus 243 ~qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~ 322 (450)
T 2yxl_A 243 VQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKA 322 (450)
T ss_dssp ECCHHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCC
T ss_pred ecCchhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhc
Confidence 33444555566778888999999999999999999985 3 699999999999999999987554 899999999887
Q ss_pred ccccchhhHHHhhcCCCCccEEEEcCCCc
Q 023482 200 HIRSHMLSLFERRKSSSGFAKVVANIPFN 228 (281)
Q Consensus 200 ~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~ 228 (281)
+.. ...+.||+|+.|+|+.
T Consensus 323 ~~~----------~~~~~fD~Vl~D~Pcs 341 (450)
T 2yxl_A 323 PEI----------IGEEVADKVLLDAPCT 341 (450)
T ss_dssp SSS----------SCSSCEEEEEEECCCC
T ss_pred chh----------hccCCCCEEEEcCCCC
Confidence 521 1125799999999984
No 229
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.05 E-value=2.8e-10 Score=94.16 Aligned_cols=86 Identities=10% Similarity=0.040 Sum_probs=63.7
Q ss_pred HHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCCC-CeEEEEcCccccccccchh
Q 023482 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHIRSHML 206 (281)
Q Consensus 130 ~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~~-~v~~~~gD~~~~~~~d~~~ 206 (281)
...+...+. ++.+|||+|||+|.++..++.. +++|+|+|+|+.|++.++++....+ ..++..+|..+.
T Consensus 40 Y~~~~~~l~--~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~------- 110 (200)
T 3fzg_A 40 YTYVFGNIK--HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESD------- 110 (200)
T ss_dssp HHHHHHHSC--CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHH-------
T ss_pred HHHHHhhcC--CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccccc-------
Confidence 444445553 5779999999999999999776 6699999999999999999987654 223333665443
Q ss_pred hHHHhhcCCCCccEEEEcCCCccc
Q 023482 207 SLFERRKSSSGFAKVVANIPFNIS 230 (281)
Q Consensus 207 d~v~~~~~~~~~d~Vi~n~P~~~~ 230 (281)
..++.||+|+++.-++..
T Consensus 111 ------~~~~~~DvVLa~k~LHlL 128 (200)
T 3fzg_A 111 ------VYKGTYDVVFLLKMLPVL 128 (200)
T ss_dssp ------HTTSEEEEEEEETCHHHH
T ss_pred ------CCCCCcChhhHhhHHHhh
Confidence 234679999997655433
No 230
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.05 E-value=3.9e-10 Score=106.53 Aligned_cols=95 Identities=14% Similarity=0.152 Sum_probs=76.2
Q ss_pred ccCCHHHHHHHHHHhcCC--CCCEEEEEcCCccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEcC
Q 023482 123 YMLNSEINDQLAAAAAVQ--EGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASI--DQLKVLQED 195 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l~~~--~~~~VLDiGcG~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~gD 195 (281)
++.+......+...+.+. ++.+|||+|||+|..|..+++. .++|+|+|+++.+++.+++++.+. .+++++++|
T Consensus 97 ~~~Qd~~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D 176 (479)
T 2frx_A 97 FYIQEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFD 176 (479)
T ss_dssp EEECCHHHHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCC
T ss_pred EEEECHHHHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 444444444455666777 8899999999999999999986 369999999999999999998754 389999999
Q ss_pred ccccccccchhhHHHhhcCCCCccEEEEcCCCc
Q 023482 196 FVKCHIRSHMLSLFERRKSSSGFAKVVANIPFN 228 (281)
Q Consensus 196 ~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~ 228 (281)
+.+++. ...+.||+|++|+|+.
T Consensus 177 ~~~~~~-----------~~~~~fD~Il~D~PcS 198 (479)
T 2frx_A 177 GRVFGA-----------AVPEMFDAILLDAPCS 198 (479)
T ss_dssp STTHHH-----------HSTTCEEEEEEECCCC
T ss_pred HHHhhh-----------hccccCCEEEECCCcC
Confidence 988652 1236799999999974
No 231
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=99.04 E-value=8.2e-10 Score=108.66 Aligned_cols=114 Identities=15% Similarity=0.181 Sum_probs=83.2
Q ss_pred HHHHHHHhcCCCCCcccCccccCCHHHHHHHHHH----hc--CCCCCEEEEEcCCccHHHHHHHHcC-----CEEEEEeC
Q 023482 103 ATIKALNSKGRFPRKSLGQHYMLNSEINDQLAAA----AA--VQEGDIVLEIGPGTGSLTNVLLNAG-----ATVLAIEK 171 (281)
Q Consensus 103 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~----l~--~~~~~~VLDiGcG~G~~t~~la~~~-----~~v~gvD~ 171 (281)
.+.+.+.++....+...|+ |++++.++..|+.. +. ..++.+|||+|||+|.++..++... .+++|+|+
T Consensus 278 dL~ell~eya~k~Rkk~Gq-FYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEI 356 (878)
T 3s1s_A 278 ELAELIHDIATRGRGHEGV-VPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDI 356 (878)
T ss_dssp HHHHHHHHHHTTSCCCCBS-SSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECS
T ss_pred HHHHHHHHHHHHhCCcCce-EcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEEC
Confidence 3334444455566667777 99999999999887 32 2357799999999999999998762 37999999
Q ss_pred CHHHHHHH--HHHhcCC----C--CeEEEEcCccccccccchhhHHHhhcCCCCccEEEEcCCCc
Q 023482 172 DQHMVGLV--RERFASI----D--QLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFN 228 (281)
Q Consensus 172 s~~~l~~a--~~~~~~~----~--~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~ 228 (281)
++.+++.| +.+...+ + ...+...|+..... .....||+||+||||.
T Consensus 357 Dp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~-----------~~~~kFDVVIgNPPYg 410 (878)
T 3s1s_A 357 ETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNP-----------EDFANVSVVVMNPPYV 410 (878)
T ss_dssp CGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCG-----------GGGTTEEEEEECCBCC
T ss_pred CHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccc-----------cccCCCCEEEECCCcc
Confidence 99999999 5554431 1 34566666665321 1236799999999994
No 232
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.04 E-value=3.3e-10 Score=91.08 Aligned_cols=101 Identities=18% Similarity=0.286 Sum_probs=70.3
Q ss_pred HHHHHhc-CCCCCEEEEEcCCccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhh
Q 023482 132 QLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLS 207 (281)
Q Consensus 132 ~l~~~l~-~~~~~~VLDiGcG~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d 207 (281)
.+++.+. ..++.+|||+|||+|.++..+++. +.+++|+|+++ +++. .+++++++|+.+.+..+....
T Consensus 12 ~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~--------~~~~~~~~d~~~~~~~~~~~~ 82 (180)
T 1ej0_A 12 EIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI--------VGVDFLQGDFRDELVMKALLE 82 (180)
T ss_dssp HHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC--------TTEEEEESCTTSHHHHHHHHH
T ss_pred HHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc--------CcEEEEEcccccchhhhhhhc
Confidence 3444444 557789999999999999999987 36999999999 6532 589999999988651110000
Q ss_pred HHHhhcCCCCccEEEEcCCCccc--------------HHH---HHHhccCCCCcc
Q 023482 208 LFERRKSSSGFAKVVANIPFNIS--------------TDV---IKQLLPMGDIFS 245 (281)
Q Consensus 208 ~v~~~~~~~~~d~Vi~n~P~~~~--------------~~~---~~~ll~~~~~~~ 245 (281)
. ...+.||+|++|+|++.. ..+ +.++++++|.+.
T Consensus 83 ~----~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~ 133 (180)
T 1ej0_A 83 R----VGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFV 133 (180)
T ss_dssp H----HTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred c----CCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEE
Confidence 0 123689999999887542 222 346777777654
No 233
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.04 E-value=4.3e-10 Score=99.13 Aligned_cols=94 Identities=18% Similarity=0.269 Sum_probs=72.0
Q ss_pred CCCCEEEEEcCCccHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhc------------CCCCeEEEEcCccccccccchh
Q 023482 140 QEGDIVLEIGPGTGSLTNVLLNAG-ATVLAIEKDQHMVGLVRERFA------------SIDQLKVLQEDFVKCHIRSHML 206 (281)
Q Consensus 140 ~~~~~VLDiGcG~G~~t~~la~~~-~~v~gvD~s~~~l~~a~~~~~------------~~~~v~~~~gD~~~~~~~d~~~ 206 (281)
..+.+|||||||+|.++..+++.+ .+|++||+|+.+++.|++++. ..++++++.+|+.+...
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~----- 148 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIK----- 148 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHH-----
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhc-----
Confidence 456799999999999999999884 599999999999999999871 12489999999876311
Q ss_pred hHHHhhcCCCCccEEEEcCCCccc-------H---HHHHHhccCCCCcc
Q 023482 207 SLFERRKSSSGFAKVVANIPFNIS-------T---DVIKQLLPMGDIFS 245 (281)
Q Consensus 207 d~v~~~~~~~~~d~Vi~n~P~~~~-------~---~~~~~ll~~~~~~~ 245 (281)
. .+.||+|++++|.... . ..+.++++++|.+.
T Consensus 149 ------~-~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv 190 (281)
T 1mjf_A 149 ------N-NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYV 190 (281)
T ss_dssp ------H-CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEE
T ss_pred ------c-cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEE
Confidence 2 3679999999875321 2 23357777777653
No 234
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.03 E-value=6.7e-10 Score=99.30 Aligned_cols=93 Identities=13% Similarity=0.191 Sum_probs=71.4
Q ss_pred CEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEcCccccccccchhhHHHhhcCCCCc
Q 023482 143 DIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLSLFERRKSSSGF 218 (281)
Q Consensus 143 ~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~ 218 (281)
.+|||||||+|.++..+++. +.+|++||+|+.+++.|++++... ++++++++|+.++... ...+.|
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~----------~~~~~f 160 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAES----------FTPASR 160 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHT----------CCTTCE
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhh----------ccCCCC
Confidence 39999999999999999984 679999999999999999998743 4899999999875210 123689
Q ss_pred cEEEEcCCCcc-------cH---HHHHHhccCCCCcc
Q 023482 219 AKVVANIPFNI-------ST---DVIKQLLPMGDIFS 245 (281)
Q Consensus 219 d~Vi~n~P~~~-------~~---~~~~~ll~~~~~~~ 245 (281)
|+||++..... .. ..+.++|+++|.+.
T Consensus 161 DvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv 197 (317)
T 3gjy_A 161 DVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYV 197 (317)
T ss_dssp EEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEE
T ss_pred CEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEE
Confidence 99999753221 12 33457788887763
No 235
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.03 E-value=4.3e-10 Score=100.72 Aligned_cols=94 Identities=16% Similarity=0.250 Sum_probs=71.0
Q ss_pred CCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcC------CCCeEEEEcCccccccccchhhHHHh
Q 023482 140 QEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFAS------IDQLKVLQEDFVKCHIRSHMLSLFER 211 (281)
Q Consensus 140 ~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~------~~~v~~~~gD~~~~~~~d~~~d~v~~ 211 (281)
..+.+|||||||+|.++..+++. ..+|+++|+|+.+++.|++++.. .++++++.+|+.+...
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~---------- 176 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLK---------- 176 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHH----------
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHH----------
Confidence 35679999999999999999987 46999999999999999999864 2489999999976311
Q ss_pred hcCCCCccEEEEcCCCcc----------cHHHHHHhccCCCCc
Q 023482 212 RKSSSGFAKVVANIPFNI----------STDVIKQLLPMGDIF 244 (281)
Q Consensus 212 ~~~~~~~d~Vi~n~P~~~----------~~~~~~~ll~~~~~~ 244 (281)
...+.||+|+++++... .-..+.++++++|.+
T Consensus 177 -~~~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~l 218 (314)
T 2b2c_A 177 -NHKNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGIL 218 (314)
T ss_dssp -HCTTCEEEEEECCC-------------HHHHHHHHEEEEEEE
T ss_pred -hcCCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEE
Confidence 12367999999875321 112335677777655
No 236
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.03 E-value=5.5e-10 Score=99.49 Aligned_cols=101 Identities=17% Similarity=0.171 Sum_probs=67.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCCC--------CeEEEEcCccccccccchhhHHHh
Q 023482 141 EGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASID--------QLKVLQEDFVKCHIRSHMLSLFER 211 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~~~~~~--------~v~~~~gD~~~~~~~d~~~d~v~~ 211 (281)
++.+|||||||+|..+..++.. +.+|+|+|+|+.|++.|+++....+ ++++.++|+..-.+.. ++. .
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~---~l~-~ 123 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVS---SVR-E 123 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHH---HHH-T
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhh---hhh-c
Confidence 4679999999999866666655 5799999999999999998875332 2678888873311100 000 0
Q ss_pred hcCCCCccEEEEcCCCcc------cH---HHHHHhccCCCCcc
Q 023482 212 RKSSSGFAKVVANIPFNI------ST---DVIKQLLPMGDIFS 245 (281)
Q Consensus 212 ~~~~~~~d~Vi~n~P~~~------~~---~~~~~ll~~~~~~~ 245 (281)
....+.||+|++...++. .. ..+.++|++||.+-
T Consensus 124 ~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i 166 (302)
T 2vdw_A 124 VFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVL 166 (302)
T ss_dssp TCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEE
T ss_pred cccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 012368999998644321 12 23458889998873
No 237
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.03 E-value=8.5e-11 Score=108.91 Aligned_cols=107 Identities=14% Similarity=0.131 Sum_probs=75.7
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhh
Q 023482 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLS 207 (281)
Q Consensus 128 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d 207 (281)
.+++.+++.+.+.++.+|||||||+|.++..+++.+.+|+|+|+++.+++.|+++........+..+++.++++.
T Consensus 94 ~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~----- 168 (416)
T 4e2x_A 94 MLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVRRT----- 168 (416)
T ss_dssp HHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHH-----
T ss_pred HHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHcCCCcceeeechhhHhhcccC-----
Confidence 456677777777788899999999999999999998999999999999999987611100111223333333322
Q ss_pred HHHhhcCCCCccEEEEcCCCcccH------HHHHHhccCCCCcce
Q 023482 208 LFERRKSSSGFAKVVANIPFNIST------DVIKQLLPMGDIFSE 246 (281)
Q Consensus 208 ~v~~~~~~~~~d~Vi~n~P~~~~~------~~~~~ll~~~~~~~~ 246 (281)
.++||+|+++..+++.. ..+.++++++|.+..
T Consensus 169 -------~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i 206 (416)
T 4e2x_A 169 -------EGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVF 206 (416)
T ss_dssp -------HCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEE
T ss_pred -------CCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEE
Confidence 37899999986654432 334578888876643
No 238
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.03 E-value=6.2e-10 Score=92.31 Aligned_cols=99 Identities=15% Similarity=0.260 Sum_probs=66.5
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHc----CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccc---cc-------
Q 023482 139 VQEGDIVLEIGPGTGSLTNVLLNA----GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIR---SH------- 204 (281)
Q Consensus 139 ~~~~~~VLDiGcG~G~~t~~la~~----~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~---d~------- 204 (281)
+.++.+|||+|||+|.++..+++. +.+|+|+|+++.. ...+++++++|+.+.+.. ..
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~---------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~ 90 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD---------PIPNVYFIQGEIGKDNMNNIKNINYIDNMN 90 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC---------CCTTCEEEECCTTTTSSCCC----------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC---------CCCCceEEEccccchhhhhhcccccccccc
Confidence 356789999999999999999986 3699999999831 124799999999886510 00
Q ss_pred ---hhhHHHhhcCCCCccEEEEcCCCccc----H-------------HHHHHhccCCCCcce
Q 023482 205 ---MLSLFERRKSSSGFAKVVANIPFNIS----T-------------DVIKQLLPMGDIFSE 246 (281)
Q Consensus 205 ---~~d~v~~~~~~~~~d~Vi~n~P~~~~----~-------------~~~~~ll~~~~~~~~ 246 (281)
..+.+........||+|+++.++++. . ..+.++++++|.+..
T Consensus 91 ~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~ 152 (201)
T 2plw_A 91 NNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIV 152 (201)
T ss_dssp -CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred chhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEE
Confidence 00000000123689999999766542 1 124578888887643
No 239
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.01 E-value=2.6e-10 Score=106.90 Aligned_cols=94 Identities=16% Similarity=0.140 Sum_probs=76.2
Q ss_pred ccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCCC--CeEEEEcCcc
Q 023482 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASID--QLKVLQEDFV 197 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~~--~v~~~~gD~~ 197 (281)
++.+......+...+.+.++.+|||+|||+|..+..+++. .++|+|+|+++.+++.+++++.+.+ ++.++++|+.
T Consensus 87 ~~vQd~ss~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~ 166 (456)
T 3m4x_A 87 EYSQEPSAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPA 166 (456)
T ss_dssp CEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHH
T ss_pred EEEECHHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHH
Confidence 4444444555666778888999999999999999999986 3699999999999999999987654 8999999998
Q ss_pred ccccccchhhHHHhhcCCCCccEEEEcCCC
Q 023482 198 KCHIRSHMLSLFERRKSSSGFAKVVANIPF 227 (281)
Q Consensus 198 ~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~ 227 (281)
+++. ...+.||+|+.|+|+
T Consensus 167 ~l~~-----------~~~~~FD~Il~DaPC 185 (456)
T 3m4x_A 167 ELVP-----------HFSGFFDRIVVDAPC 185 (456)
T ss_dssp HHHH-----------HHTTCEEEEEEECCC
T ss_pred Hhhh-----------hccccCCEEEECCCC
Confidence 7641 123689999999996
No 240
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.01 E-value=7.9e-10 Score=97.54 Aligned_cols=95 Identities=18% Similarity=0.219 Sum_probs=72.6
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcC------CCCeEEEEcCccccccccchhhHHH
Q 023482 139 VQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFAS------IDQLKVLQEDFVKCHIRSHMLSLFE 210 (281)
Q Consensus 139 ~~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~------~~~v~~~~gD~~~~~~~d~~~d~v~ 210 (281)
..++.+|||||||+|..+..+++. ..+|+++|+|+.+++.|++++.. .++++++.+|+.+...
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~--------- 146 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLE--------- 146 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHH---------
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHH---------
Confidence 345689999999999999999987 46999999999999999999864 2489999999977421
Q ss_pred hhcCCCCccEEEEcCCCcc--c-----H---HHHHHhccCCCCc
Q 023482 211 RRKSSSGFAKVVANIPFNI--S-----T---DVIKQLLPMGDIF 244 (281)
Q Consensus 211 ~~~~~~~~d~Vi~n~P~~~--~-----~---~~~~~ll~~~~~~ 244 (281)
...+.||+|+++.+... . . ..+.++++++|.+
T Consensus 147 --~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~l 188 (283)
T 2i7c_A 147 --NVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYC 188 (283)
T ss_dssp --HCCSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEE
T ss_pred --hCCCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEE
Confidence 12467999999764322 1 2 2335677777765
No 241
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.00 E-value=8.5e-10 Score=102.90 Aligned_cols=96 Identities=18% Similarity=0.243 Sum_probs=79.9
Q ss_pred ccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhcCCC-CeEEEEcCcccc
Q 023482 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG--ATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKC 199 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~--~~v~gvD~s~~~l~~a~~~~~~~~-~v~~~~gD~~~~ 199 (281)
+..+......+...+.+.++.+|||+|||+|..+..+++.. .+|+|+|+++.+++.+++++...+ +++++++|+.++
T Consensus 228 ~~~qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~ 307 (429)
T 1sqg_A 228 VTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYP 307 (429)
T ss_dssp EEECCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCT
T ss_pred eEeeCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhc
Confidence 55556667777778888899999999999999999999874 699999999999999999987665 789999999886
Q ss_pred ccccchhhHHHhhcCCCCccEEEEcCCCc
Q 023482 200 HIRSHMLSLFERRKSSSGFAKVVANIPFN 228 (281)
Q Consensus 200 ~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~ 228 (281)
+.. ...+.||.|+.|+|+.
T Consensus 308 ~~~----------~~~~~fD~Vl~D~Pcs 326 (429)
T 1sqg_A 308 SQW----------CGEQQFDRILLDAPCS 326 (429)
T ss_dssp HHH----------HTTCCEEEEEEECCCC
T ss_pred hhh----------cccCCCCEEEEeCCCC
Confidence 410 1236799999999985
No 242
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.95 E-value=2.8e-09 Score=89.59 Aligned_cols=98 Identities=20% Similarity=0.234 Sum_probs=71.5
Q ss_pred HHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHh
Q 023482 132 QLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFER 211 (281)
Q Consensus 132 ~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~ 211 (281)
.+++.+. .++.+|||+|||+|.++..+++.+.+++|+|+++.+++.++++.. +++++|+.+...+
T Consensus 24 ~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~~-----~~~~~d~~~~~~~--------- 88 (230)
T 3cc8_A 24 NLLKHIK-KEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKLD-----HVVLGDIETMDMP--------- 88 (230)
T ss_dssp HHHTTCC-TTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTSS-----EEEESCTTTCCCC---------
T ss_pred HHHHHhc-cCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhCC-----cEEEcchhhcCCC---------
Confidence 3444444 567899999999999999999888899999999999999987653 6899999873221
Q ss_pred hcCCCCccEEEEcCCCccc---HHHH---HHhccCCCCcc
Q 023482 212 RKSSSGFAKVVANIPFNIS---TDVI---KQLLPMGDIFS 245 (281)
Q Consensus 212 ~~~~~~~d~Vi~n~P~~~~---~~~~---~~ll~~~~~~~ 245 (281)
...+.||+|+++..++.. ..++ .++++++|.+-
T Consensus 89 -~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~ 127 (230)
T 3cc8_A 89 -YEEEQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVIL 127 (230)
T ss_dssp -SCTTCEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEE
T ss_pred -CCCCccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEE
Confidence 223679999997655432 2233 35566666553
No 243
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.95 E-value=1.4e-10 Score=99.57 Aligned_cols=109 Identities=16% Similarity=0.236 Sum_probs=66.6
Q ss_pred HHHHHHHHhcCC-CCCEEEEEcCCccHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEE-cCccccccccch
Q 023482 129 INDQLAAAAAVQ-EGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASIDQLKVLQ-EDFVKCHIRSHM 205 (281)
Q Consensus 129 ~~~~l~~~l~~~-~~~~VLDiGcG~G~~t~~la~~~~-~v~gvD~s~~~l~~a~~~~~~~~~v~~~~-gD~~~~~~~d~~ 205 (281)
....+++.+.+. .+.+|||||||+|.++..+++.++ +|+|+|+++.|++.|+++.. ++.... .++..+...+..
T Consensus 24 kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~---~~~~~~~~~~~~~~~~~~~ 100 (232)
T 3opn_A 24 KLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDE---RVVVMEQFNFRNAVLADFE 100 (232)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCT---TEEEECSCCGGGCCGGGCC
T ss_pred HHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCc---cccccccceEEEeCHhHcC
Confidence 345666666554 456999999999999999999975 99999999999999877544 222211 122211111000
Q ss_pred hhHHHhhcCCCCccEEEEcCCCcccHHHHHHhccCCCCcce
Q 023482 206 LSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFSE 246 (281)
Q Consensus 206 ~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~~~ 246 (281)
... .....+|++++++ ...-+.+.++++++|.+-.
T Consensus 101 ~~~----~d~~~~D~v~~~l--~~~l~~i~rvLkpgG~lv~ 135 (232)
T 3opn_A 101 QGR----PSFTSIDVSFISL--DLILPPLYEILEKNGEVAA 135 (232)
T ss_dssp SCC----CSEEEECCSSSCG--GGTHHHHHHHSCTTCEEEE
T ss_pred cCC----CCEEEEEEEhhhH--HHHHHHHHHhccCCCEEEE
Confidence 000 0002344444443 3444666789999987644
No 244
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.95 E-value=8.7e-10 Score=96.25 Aligned_cols=91 Identities=13% Similarity=0.106 Sum_probs=70.1
Q ss_pred CCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC------CCCeEEEEcCccccccccchhhHHHhhc
Q 023482 140 QEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFAS------IDQLKVLQEDFVKCHIRSHMLSLFERRK 213 (281)
Q Consensus 140 ~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~------~~~v~~~~gD~~~~~~~d~~~d~v~~~~ 213 (281)
..+.+|||||||+|.++..+++.+.+|+++|+|+.+++.|+++++. .++++++.+|+.+..
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~------------- 137 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI------------- 137 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC-------------
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH-------------
Confidence 3567999999999999999887767999999999999999987643 248999999998752
Q ss_pred CCCCccEEEEcCCCcc-cHHHHHHhccCCCCcc
Q 023482 214 SSSGFAKVVANIPFNI-STDVIKQLLPMGDIFS 245 (281)
Q Consensus 214 ~~~~~d~Vi~n~P~~~-~~~~~~~ll~~~~~~~ 245 (281)
+.||+|+++.+-.. .-..+.+.|+++|.+.
T Consensus 138 --~~fD~Ii~d~~dp~~~~~~~~~~L~pgG~lv 168 (262)
T 2cmg_A 138 --KKYDLIFCLQEPDIHRIDGLKRMLKEDGVFI 168 (262)
T ss_dssp --CCEEEEEESSCCCHHHHHHHHTTEEEEEEEE
T ss_pred --hhCCEEEECCCChHHHHHHHHHhcCCCcEEE
Confidence 46899998853221 2334556777777653
No 245
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.94 E-value=4.5e-09 Score=95.42 Aligned_cols=105 Identities=14% Similarity=0.135 Sum_probs=80.0
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCccccccc
Q 023482 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIR 202 (281)
Q Consensus 128 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~~~~~~ 202 (281)
.....+++.+...++.+|||||||+|.++..+++. +.+++++|+ +.+++.|++++... ++++++.+|+.+.+++
T Consensus 177 ~~~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 255 (359)
T 1x19_A 177 FAIQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYP 255 (359)
T ss_dssp HHHHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCC
T ss_pred hhHHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCC
Confidence 34566777777778889999999999999999987 569999999 99999999987643 2699999999987642
Q ss_pred cchhhHHHhhcCCCCccEEEEcCCCc-ccH----HHH---HHhccCCCCcceE
Q 023482 203 SHMLSLFERRKSSSGFAKVVANIPFN-IST----DVI---KQLLPMGDIFSEV 247 (281)
Q Consensus 203 d~~~d~v~~~~~~~~~d~Vi~n~P~~-~~~----~~~---~~ll~~~~~~~~~ 247 (281)
.+|+|+++..++ +.. .++ .+.++++|.+-..
T Consensus 256 --------------~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~ 294 (359)
T 1x19_A 256 --------------EADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLIL 294 (359)
T ss_dssp --------------CCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred --------------CCCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 239998876654 332 222 3667778766333
No 246
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.94 E-value=3e-09 Score=96.87 Aligned_cols=101 Identities=21% Similarity=0.229 Sum_probs=76.5
Q ss_pred HHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCccccccccc
Q 023482 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRSH 204 (281)
Q Consensus 130 ~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~~~~~~d~ 204 (281)
...+++.+...++.+|||||||+|.++..+++. +.+++++|+ +.+++.|+++.... ++++++.+|+.+ +++
T Consensus 171 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-- 246 (374)
T 1qzz_A 171 YEAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLP-- 246 (374)
T ss_dssp THHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCS--
T ss_pred HHHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCC--
Confidence 345666666677889999999999999999987 569999999 99999999987654 389999999976 321
Q ss_pred hhhHHHhhcCCCCccEEEEcCCCc-ccHH----HH---HHhccCCCCcc
Q 023482 205 MLSLFERRKSSSGFAKVVANIPFN-ISTD----VI---KQLLPMGDIFS 245 (281)
Q Consensus 205 ~~d~v~~~~~~~~~d~Vi~n~P~~-~~~~----~~---~~ll~~~~~~~ 245 (281)
..||+|+++..++ +..+ ++ .++++++|.+-
T Consensus 247 -----------~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~ 284 (374)
T 1qzz_A 247 -----------VTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLL 284 (374)
T ss_dssp -----------CCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred -----------CCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence 2489999976654 3332 22 36667776553
No 247
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.92 E-value=4.6e-09 Score=94.09 Aligned_cols=102 Identities=11% Similarity=0.139 Sum_probs=77.0
Q ss_pred HHHHHHHHhcC--CCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCcccccc
Q 023482 129 INDQLAAAAAV--QEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHI 201 (281)
Q Consensus 129 ~~~~l~~~l~~--~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~~~~~ 201 (281)
....+++.+.. .++.+|||+|||+|.++..+++. +.+++++|++ .+++.|+++.... ++++++.+|+.+.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 229 (335)
T 2r3s_A 151 PAQLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDY 229 (335)
T ss_dssp HHHHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCC
T ss_pred hHHHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCC
Confidence 44566667766 67789999999999999999987 6799999999 9999999987543 369999999988654
Q ss_pred ccchhhHHHhhcCCCCccEEEEcCCCc-ccHH----HH---HHhccCCCCc
Q 023482 202 RSHMLSLFERRKSSSGFAKVVANIPFN-ISTD----VI---KQLLPMGDIF 244 (281)
Q Consensus 202 ~d~~~d~v~~~~~~~~~d~Vi~n~P~~-~~~~----~~---~~ll~~~~~~ 244 (281)
+ +.||+|+++..++ +..+ ++ .++++++|.+
T Consensus 230 ~-------------~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l 267 (335)
T 2r3s_A 230 G-------------NDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKV 267 (335)
T ss_dssp C-------------SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEE
T ss_pred C-------------CCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEE
Confidence 2 3499999965543 3322 22 3556666644
No 248
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.92 E-value=7.6e-09 Score=90.42 Aligned_cols=94 Identities=15% Similarity=0.245 Sum_probs=78.0
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchh
Q 023482 127 SEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHML 206 (281)
Q Consensus 127 ~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~ 206 (281)
+-+.+.+++.+.+.++..++|.+||.|..+..+++.+++|+|+|.|+.+++.|++ +.. ++++++++|+.+++.
T Consensus 8 pVLl~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A~~-L~~-~rv~lv~~~f~~l~~----- 80 (285)
T 1wg8_A 8 PVLYQEALDLLAVRPGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKG-LHL-PGLTVVQGNFRHLKR----- 80 (285)
T ss_dssp CTTHHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH-TCC-TTEEEEESCGGGHHH-----
T ss_pred hHHHHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHHHh-hcc-CCEEEEECCcchHHH-----
Confidence 3457788888888889999999999999999999988899999999999999999 765 699999999998752
Q ss_pred hHHHhhcCCCCccEEEEcCCCcc
Q 023482 207 SLFERRKSSSGFAKVVANIPFNI 229 (281)
Q Consensus 207 d~v~~~~~~~~~d~Vi~n~P~~~ 229 (281)
.+.. ...+.+|.|+.++.+..
T Consensus 81 -~L~~-~g~~~vDgIL~DLGvSS 101 (285)
T 1wg8_A 81 -HLAA-LGVERVDGILADLGVSS 101 (285)
T ss_dssp -HHHH-TTCSCEEEEEEECSCCH
T ss_pred -HHHH-cCCCCcCEEEeCCcccc
Confidence 1111 12257999999988764
No 249
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.92 E-value=2.1e-09 Score=98.64 Aligned_cols=92 Identities=11% Similarity=0.035 Sum_probs=71.3
Q ss_pred CCCEEEEEcCCccHHHHHHHHc-C-CEEEEEeCCHHHHHHHHHHhcCC---------------C--CeEEEEcCcccccc
Q 023482 141 EGDIVLEIGPGTGSLTNVLLNA-G-ATVLAIEKDQHMVGLVRERFASI---------------D--QLKVLQEDFVKCHI 201 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~la~~-~-~~v~gvD~s~~~l~~a~~~~~~~---------------~--~v~~~~gD~~~~~~ 201 (281)
++.+|||+|||+|..++.++.. + .+|+++|+++.+++.+++|++.+ + +++++++|+.++..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 6789999999999999999987 3 58999999999999999998755 3 49999999977531
Q ss_pred ccchhhHHHhhcCCCCccEEEEcCCCcccHHHHH---HhccCCCCc
Q 023482 202 RSHMLSLFERRKSSSGFAKVVANIPFNISTDVIK---QLLPMGDIF 244 (281)
Q Consensus 202 ~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~~~~~---~ll~~~~~~ 244 (281)
.....||+|+.+||+. ..+++. +++++++.+
T Consensus 127 -----------~~~~~fD~I~lDP~~~-~~~~l~~a~~~lk~gG~l 160 (378)
T 2dul_A 127 -----------ERHRYFHFIDLDPFGS-PMEFLDTALRSAKRRGIL 160 (378)
T ss_dssp -----------HSTTCEEEEEECCSSC-CHHHHHHHHHHEEEEEEE
T ss_pred -----------hccCCCCEEEeCCCCC-HHHHHHHHHHhcCCCCEE
Confidence 1135799999887653 344443 556666643
No 250
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.92 E-value=1.3e-09 Score=96.07 Aligned_cols=103 Identities=16% Similarity=0.215 Sum_probs=66.6
Q ss_pred CCCCEEEEEcCCccHHHHHH----HHc--CCEE--EEEeCCHHHHHHHHHHhcCC---CCeEE--EEcCccccccccchh
Q 023482 140 QEGDIVLEIGPGTGSLTNVL----LNA--GATV--LAIEKDQHMVGLVRERFASI---DQLKV--LQEDFVKCHIRSHML 206 (281)
Q Consensus 140 ~~~~~VLDiGcG~G~~t~~l----a~~--~~~v--~gvD~s~~~l~~a~~~~~~~---~~v~~--~~gD~~~~~~~d~~~ 206 (281)
.++.+|||||||+|.++..+ +.. +..| +|+|+|++|++.|+++.... .++++ ..+++.+++..
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~---- 126 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSR---- 126 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHH----
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhh----
Confidence 45679999999999876543 332 3444 99999999999999987643 35544 45665543210
Q ss_pred hHHHhhcCCCCccEEEEcCCCcccH------HHHHHhccCCCCcceEE
Q 023482 207 SLFERRKSSSGFAKVVANIPFNIST------DVIKQLLPMGDIFSEVV 248 (281)
Q Consensus 207 d~v~~~~~~~~~d~Vi~n~P~~~~~------~~~~~ll~~~~~~~~~~ 248 (281)
+. .-...++||+|+++.-+++.. ..+.++|++||.+....
T Consensus 127 -~~-~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 127 -ML-EKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp -HH-TTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred -hc-cccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 00 000236799999986655432 33458888988775543
No 251
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.90 E-value=3e-09 Score=89.64 Aligned_cols=85 Identities=19% Similarity=0.237 Sum_probs=66.7
Q ss_pred CCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCCccEE
Q 023482 142 GDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKV 221 (281)
Q Consensus 142 ~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~V 221 (281)
+.+|||+|||+|.++..++.. +|+|+++.+++.++++ +++++++|+.++++. .+.||+|
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~----~~vD~s~~~~~~a~~~-----~~~~~~~d~~~~~~~------------~~~fD~v 106 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK----IGVEPSERMAEIARKR-----GVFVLKGTAENLPLK------------DESFDFA 106 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC----EEEESCHHHHHHHHHT-----TCEEEECBTTBCCSC------------TTCEEEE
T ss_pred CCcEEEeCCCCCHHHHHHHHH----hccCCCHHHHHHHHhc-----CCEEEEcccccCCCC------------CCCeeEE
Confidence 779999999999999988765 9999999999999886 689999999887743 3679999
Q ss_pred EEcCCCccc---H---HHHHHhccCCCCcceE
Q 023482 222 VANIPFNIS---T---DVIKQLLPMGDIFSEV 247 (281)
Q Consensus 222 i~n~P~~~~---~---~~~~~ll~~~~~~~~~ 247 (281)
+++..++.. . ..+.++++++|.+...
T Consensus 107 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 138 (219)
T 1vlm_A 107 LMVTTICFVDDPERALKEAYRILKKGGYLIVG 138 (219)
T ss_dssp EEESCGGGSSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEcchHhhccCHHHHHHHHHHHcCCCcEEEEE
Confidence 997655432 2 2334677777766443
No 252
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.89 E-value=1.3e-08 Score=92.78 Aligned_cols=93 Identities=14% Similarity=0.237 Sum_probs=72.3
Q ss_pred CCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCcccc--ccccchhhHHHhh
Q 023482 140 QEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKC--HIRSHMLSLFERR 212 (281)
Q Consensus 140 ~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~~--~~~d~~~d~v~~~ 212 (281)
....+|||||||+|.++..+++. +.+++++|+ +.+++.|+++....+ +++++.+|+.+. |++
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p---------- 246 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP---------- 246 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC----------
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC----------
Confidence 35679999999999999999985 569999999 999999999987653 799999999875 221
Q ss_pred cCCCCccEEEEcCCCc-ccHH----H---HHHhccCCCCcce
Q 023482 213 KSSSGFAKVVANIPFN-ISTD----V---IKQLLPMGDIFSE 246 (281)
Q Consensus 213 ~~~~~~d~Vi~n~P~~-~~~~----~---~~~ll~~~~~~~~ 246 (281)
+.||+|+....++ +..+ + +.+.+++||.+..
T Consensus 247 ---~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i 285 (363)
T 3dp7_A 247 ---TGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYI 285 (363)
T ss_dssp ---CCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEE
T ss_pred ---CCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 5789999865553 4332 2 2366788886643
No 253
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.89 E-value=4.6e-10 Score=98.76 Aligned_cols=99 Identities=17% Similarity=0.182 Sum_probs=69.1
Q ss_pred HHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc---CCC-CeEEE--EcCccccccccc
Q 023482 131 DQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFA---SID-QLKVL--QEDFVKCHIRSH 204 (281)
Q Consensus 131 ~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~---~~~-~v~~~--~gD~~~~~~~d~ 204 (281)
..+.+...+.++.+|||+|||+|.++..+++. .+|+|||+++ |+..++++.. ..+ +++++ ++|+.+++
T Consensus 72 ~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~---- 145 (276)
T 2wa2_A 72 AWIDERGGVELKGTVVDLGCGRGSWSYYAASQ-PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME---- 145 (276)
T ss_dssp HHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS-TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC----
T ss_pred HHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc-CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC----
Confidence 44444444557889999999999999999998 7999999998 5433322211 112 78999 99998864
Q ss_pred hhhHHHhhcCCCCccEEEEcCCCcc------------cHHHHHHhccCCC--Ccc
Q 023482 205 MLSLFERRKSSSGFAKVVANIPFNI------------STDVIKQLLPMGD--IFS 245 (281)
Q Consensus 205 ~~d~v~~~~~~~~~d~Vi~n~P~~~------------~~~~~~~ll~~~~--~~~ 245 (281)
.+.||+|+++..... .-..+.++++++| .|.
T Consensus 146 ----------~~~fD~Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v 190 (276)
T 2wa2_A 146 ----------PFQADTVLCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFC 190 (276)
T ss_dssp ----------CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred ----------CCCcCEEEECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEE
Confidence 267999999866211 1123457788888 553
No 254
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.87 E-value=1.9e-08 Score=91.74 Aligned_cols=104 Identities=22% Similarity=0.312 Sum_probs=78.2
Q ss_pred HHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCccccccccc
Q 023482 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRSH 204 (281)
Q Consensus 130 ~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~~~~~~d~ 204 (281)
...+++.+...++.+|||||||+|.++..+++. +.+++++|+ +.+++.|++++... ++++++.+|+.+ +++
T Consensus 191 ~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~-~~p-- 266 (369)
T 3gwz_A 191 AGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFE-TIP-- 266 (369)
T ss_dssp HHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTT-CCC--
T ss_pred HHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCC-CCC--
Confidence 455666666777889999999999999999987 569999999 99999999987643 489999999983 321
Q ss_pred hhhHHHhhcCCCCccEEEEcCCCc-ccHH----HH---HHhccCCCCcceEE
Q 023482 205 MLSLFERRKSSSGFAKVVANIPFN-ISTD----VI---KQLLPMGDIFSEVV 248 (281)
Q Consensus 205 ~~d~v~~~~~~~~~d~Vi~n~P~~-~~~~----~~---~~ll~~~~~~~~~~ 248 (281)
..||+|++...++ +..+ ++ .+.+++++.+-...
T Consensus 267 -----------~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e 307 (369)
T 3gwz_A 267 -----------DGADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVID 307 (369)
T ss_dssp -----------SSCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred -----------CCceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 3689999865543 3332 33 35667777664433
No 255
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.87 E-value=4.9e-09 Score=94.75 Aligned_cols=103 Identities=14% Similarity=0.192 Sum_probs=76.2
Q ss_pred HHHHHhcCCC-CCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCccccccccch
Q 023482 132 QLAAAAAVQE-GDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSHM 205 (281)
Q Consensus 132 ~l~~~l~~~~-~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~~~~~d~~ 205 (281)
.+++.+...+ +.+|||||||+|.++..+++. +.+++++|+ +.+++.|+++....+ +++++.+|+.+.+.
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---- 243 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARN---- 243 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGG----
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcc----
Confidence 4555555556 789999999999999999987 569999999 889999998876543 79999999988641
Q ss_pred hhHHHhhcCCCCccEEEEcCCCc-ccH----HHH---HHhccCCCCcce
Q 023482 206 LSLFERRKSSSGFAKVVANIPFN-IST----DVI---KQLLPMGDIFSE 246 (281)
Q Consensus 206 ~d~v~~~~~~~~~d~Vi~n~P~~-~~~----~~~---~~ll~~~~~~~~ 246 (281)
..++.||+|+++..++ +.. .++ .+.++++|.+-.
T Consensus 244 -------~~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i 285 (352)
T 3mcz_A 244 -------FEGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLI 285 (352)
T ss_dssp -------GTTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred -------cCCCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 0235699999976554 333 233 355667665533
No 256
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.86 E-value=6.7e-09 Score=90.90 Aligned_cols=117 Identities=15% Similarity=0.191 Sum_probs=77.5
Q ss_pred HHHHHHHHHHhcCC-CCCEEEEEcCCc--cHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEcCccc
Q 023482 127 SEINDQLAAAAAVQ-EGDIVLEIGPGT--GSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVK 198 (281)
Q Consensus 127 ~~~~~~l~~~l~~~-~~~~VLDiGcG~--G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~gD~~~ 198 (281)
+.+..+.+..+... ...+|||||||+ +..+..+++. +++|++||.|+.|++.|++++... ++++++++|+.+
T Consensus 63 r~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~ 142 (277)
T 3giw_A 63 RDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLD 142 (277)
T ss_dssp HHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTC
T ss_pred HHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccC
Confidence 44555666666532 346899999997 3344555443 679999999999999999998764 379999999988
Q ss_pred ccc------ccchhhHHHhhcCCCCccEEEEcCCCcccH------HHHHH---hccCCCCcceEEEe
Q 023482 199 CHI------RSHMLSLFERRKSSSGFAKVVANIPFNIST------DVIKQ---LLPMGDIFSEVVLL 250 (281)
Q Consensus 199 ~~~------~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~------~~~~~---ll~~~~~~~~~~~~ 250 (281)
.+. .+..+|+ +....|++|.-+++.. .++.+ .+++|+.+....+.
T Consensus 143 ~~~~l~~~~~~~~~D~-------~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~ 202 (277)
T 3giw_A 143 PASILDAPELRDTLDL-------TRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGT 202 (277)
T ss_dssp HHHHHTCHHHHTTCCT-------TSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEEC
T ss_pred hhhhhcccccccccCc-------CCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEecc
Confidence 631 0122222 2233677886665443 34544 47888887555443
No 257
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.86 E-value=5.6e-10 Score=97.63 Aligned_cols=97 Identities=9% Similarity=0.047 Sum_probs=68.2
Q ss_pred HHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc---CCC-CeEEE--EcCcccccccc
Q 023482 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFA---SID-QLKVL--QEDFVKCHIRS 203 (281)
Q Consensus 130 ~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~---~~~-~v~~~--~gD~~~~~~~d 203 (281)
...+.+...+.++.+|||+|||+|.++..+++. .+|+|||+++ |+..+++... ..+ ++.++ ++|+.+++
T Consensus 63 L~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--- 137 (265)
T 2oxt_A 63 LAWMEERGYVELTGRVVDLGCGRGGWSYYAASR-PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--- 137 (265)
T ss_dssp HHHHHHHTSCCCCEEEEEESCTTSHHHHHHHTS-TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC---
T ss_pred HHHHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc-CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC---
Confidence 445555545567889999999999999999988 7999999998 5433221111 112 78999 99998864
Q ss_pred chhhHHHhhcCCCCccEEEEcCCCcc------------cHHHHHHhccCCC
Q 023482 204 HMLSLFERRKSSSGFAKVVANIPFNI------------STDVIKQLLPMGD 242 (281)
Q Consensus 204 ~~~d~v~~~~~~~~~d~Vi~n~P~~~------------~~~~~~~ll~~~~ 242 (281)
...||+|+++..... .-..+.++++++|
T Consensus 138 -----------~~~fD~V~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG 177 (265)
T 2oxt_A 138 -----------VERTDVIMCDVGESSPKWSVESERTIKILELLEKWKVKNP 177 (265)
T ss_dssp -----------CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred -----------CCCCcEEEEeCcccCCccchhHHHHHHHHHHHHHHhccCC
Confidence 267999999866211 1133457788888
No 258
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.84 E-value=4e-09 Score=97.08 Aligned_cols=93 Identities=14% Similarity=0.101 Sum_probs=72.0
Q ss_pred CCCCEEEEEcCCccHHHHHHHHc--C-CEEEEEeCCHHHHHHHHHHhcCCC--C--eEEEEcCcccccc-ccchhhHHHh
Q 023482 140 QEGDIVLEIGPGTGSLTNVLLNA--G-ATVLAIEKDQHMVGLVRERFASID--Q--LKVLQEDFVKCHI-RSHMLSLFER 211 (281)
Q Consensus 140 ~~~~~VLDiGcG~G~~t~~la~~--~-~~v~gvD~s~~~l~~a~~~~~~~~--~--v~~~~gD~~~~~~-~d~~~d~v~~ 211 (281)
.++.+|||++||+|.+++.++.. + .+|+++|+++.+++.+++|++.++ + ++++++|+.++.. .
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~--------- 121 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKE--------- 121 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSC---------
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHh---------
Confidence 35789999999999999999985 4 489999999999999999998664 3 9999999977521 0
Q ss_pred hcCCCCccEEEEcCCCcccHHHHH---HhccCCCCc
Q 023482 212 RKSSSGFAKVVANIPFNISTDVIK---QLLPMGDIF 244 (281)
Q Consensus 212 ~~~~~~~d~Vi~n~P~~~~~~~~~---~ll~~~~~~ 244 (281)
. ...||+|+.|| |....+++. +++++++.+
T Consensus 122 -~-~~~fD~V~lDP-~g~~~~~l~~a~~~Lk~gGll 154 (392)
T 3axs_A 122 -W-GFGFDYVDLDP-FGTPVPFIESVALSMKRGGIL 154 (392)
T ss_dssp -C-SSCEEEEEECC-SSCCHHHHHHHHHHEEEEEEE
T ss_pred -h-CCCCcEEEECC-CcCHHHHHHHHHHHhCCCCEE
Confidence 1 25799999998 554444544 455666543
No 259
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.84 E-value=8.2e-09 Score=93.53 Aligned_cols=99 Identities=18% Similarity=0.275 Sum_probs=74.6
Q ss_pred HHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCccccccccch
Q 023482 131 DQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRSHM 205 (281)
Q Consensus 131 ~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~~~~~~d~~ 205 (281)
..+++.+...++.+|||||||+|.++..+++. +.+++++|+ +.+++.|++++... ++++++.+|+.+ +++
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~--- 247 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLP--- 247 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCS---
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCC---
Confidence 45566667777889999999999999999987 469999999 99999999987654 389999999976 221
Q ss_pred hhHHHhhcCCCCccEEEEcCCCc-ccHH----HH---HHhccCCCCc
Q 023482 206 LSLFERRKSSSGFAKVVANIPFN-ISTD----VI---KQLLPMGDIF 244 (281)
Q Consensus 206 ~d~v~~~~~~~~~d~Vi~n~P~~-~~~~----~~---~~ll~~~~~~ 244 (281)
..||+|+++..++ +..+ ++ .++++++|.+
T Consensus 248 ----------~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l 284 (360)
T 1tw3_A 248 ----------RKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRI 284 (360)
T ss_dssp ----------SCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEE
T ss_pred ----------CCccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEE
Confidence 3489999876653 3332 23 3555666654
No 260
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.84 E-value=8.3e-09 Score=92.54 Aligned_cols=102 Identities=13% Similarity=0.291 Sum_probs=77.5
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCcccccccc
Q 023482 129 INDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRS 203 (281)
Q Consensus 129 ~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~~~~~~d 203 (281)
....+++.+...+ .+|||+|||+|..+..+++. +.+++++|+ +.+++.|++++... ++++++.+|+.+ +++
T Consensus 156 ~~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~- 231 (334)
T 2ip2_A 156 AFHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP- 231 (334)
T ss_dssp HHHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-
T ss_pred HHHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-
Confidence 4456666666666 89999999999999999987 569999999 99999999887542 489999999987 431
Q ss_pred chhhHHHhhcCCCCccEEEEcCCCc-ccHH----H---HHHhccCCCCcce
Q 023482 204 HMLSLFERRKSSSGFAKVVANIPFN-ISTD----V---IKQLLPMGDIFSE 246 (281)
Q Consensus 204 ~~~d~v~~~~~~~~~d~Vi~n~P~~-~~~~----~---~~~ll~~~~~~~~ 246 (281)
+.||+|+++..++ +..+ + +.+.++++|.+-.
T Consensus 232 ------------~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i 270 (334)
T 2ip2_A 232 ------------SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVV 270 (334)
T ss_dssp ------------SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred ------------CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 5689999976654 3332 2 2366788876533
No 261
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.83 E-value=6.6e-09 Score=85.59 Aligned_cols=95 Identities=17% Similarity=0.264 Sum_probs=65.0
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHc-C----------CEEEEEeCCHHHHHHHHHHhcCCCCeEEE-EcCccccccccchh
Q 023482 139 VQEGDIVLEIGPGTGSLTNVLLNA-G----------ATVLAIEKDQHMVGLVRERFASIDQLKVL-QEDFVKCHIRSHML 206 (281)
Q Consensus 139 ~~~~~~VLDiGcG~G~~t~~la~~-~----------~~v~gvD~s~~~l~~a~~~~~~~~~v~~~-~gD~~~~~~~d~~~ 206 (281)
+.++.+|||+|||+|.++..+++. + .+|+|+|+++.. ...+++++ .+|+.+.+..+...
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~---------~~~~~~~~~~~d~~~~~~~~~~~ 90 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF---------PLEGATFLCPADVTDPRTSQRIL 90 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC---------CCTTCEEECSCCTTSHHHHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc---------cCCCCeEEEeccCCCHHHHHHHH
Confidence 457789999999999999999987 3 799999999832 12478999 99987654321111
Q ss_pred hHHHhhcCCCCccEEEEcCCCcc-----------------cHHHHHHhccCCCCcce
Q 023482 207 SLFERRKSSSGFAKVVANIPFNI-----------------STDVIKQLLPMGDIFSE 246 (281)
Q Consensus 207 d~v~~~~~~~~~d~Vi~n~P~~~-----------------~~~~~~~ll~~~~~~~~ 246 (281)
+. .....||+|+++.+++. .-..+.++++++|.+..
T Consensus 91 ~~----~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 143 (196)
T 2nyu_A 91 EV----LPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLC 143 (196)
T ss_dssp HH----SGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred Hh----cCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 11 12357999999875432 01123477788887643
No 262
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.83 E-value=1.2e-09 Score=97.34 Aligned_cols=97 Identities=10% Similarity=0.137 Sum_probs=67.1
Q ss_pred HHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHhcCC--CCeEEEEc-Cccccccccch
Q 023482 133 LAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEK----DQHMVGLVRERFASI--DQLKVLQE-DFVKCHIRSHM 205 (281)
Q Consensus 133 l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~----s~~~l~~a~~~~~~~--~~v~~~~g-D~~~~~~~d~~ 205 (281)
+.+...+.++.+|||+|||+|.++..+++. ++|+|||+ ++.+++.+. .... ++++++++ |+.+++
T Consensus 74 i~~~~~~~~g~~VLDlGcG~G~~s~~la~~-~~V~gvD~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~D~~~l~----- 145 (305)
T 2p41_A 74 FVERNLVTPEGKVVDLGCGRGGWSYYCGGL-KNVREVKGLTKGGPGHEEPIP--MSTYGWNLVRLQSGVDVFFIP----- 145 (305)
T ss_dssp HHHTTSSCCCEEEEEETCTTSHHHHHHHTS-TTEEEEEEECCCSTTSCCCCC--CCSTTGGGEEEECSCCTTTSC-----
T ss_pred HHHcCCCCCCCEEEEEcCCCCHHHHHHHhc-CCEEEEeccccCchhHHHHHH--hhhcCCCCeEEEeccccccCC-----
Confidence 344333456789999999999999999988 68999999 554432111 1112 37999999 888764
Q ss_pred hhHHHhhcCCCCccEEEEcCCCc---c---------cHHHHHHhccCCCCcce
Q 023482 206 LSLFERRKSSSGFAKVVANIPFN---I---------STDVIKQLLPMGDIFSE 246 (281)
Q Consensus 206 ~d~v~~~~~~~~~d~Vi~n~P~~---~---------~~~~~~~ll~~~~~~~~ 246 (281)
...||+|+++.+++ + .-..+.+++++||.|..
T Consensus 146 ---------~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~ 189 (305)
T 2p41_A 146 ---------PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCV 189 (305)
T ss_dssp ---------CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEE
T ss_pred ---------cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEE
Confidence 25799999987653 1 11224578899997644
No 263
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.81 E-value=1e-08 Score=92.03 Aligned_cols=94 Identities=17% Similarity=0.245 Sum_probs=70.9
Q ss_pred cCCCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCccccccccchhhHHHhh
Q 023482 138 AVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRSHMLSLFERR 212 (281)
Q Consensus 138 ~~~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~~~~~~d~~~d~v~~~ 212 (281)
...+..+|||||||+|.++..+++. +.+++++|+ +.+++.|++++... ++++++.+|+.+ +++
T Consensus 166 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~p---------- 233 (332)
T 3i53_A 166 DWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFD-PLP---------- 233 (332)
T ss_dssp CCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCC----------
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCC-CCC----------
Confidence 3345679999999999999999986 569999999 99999999887643 489999999973 321
Q ss_pred cCCCCccEEEEcCCCc-ccHH----HH---HHhccCCCCcce
Q 023482 213 KSSSGFAKVVANIPFN-ISTD----VI---KQLLPMGDIFSE 246 (281)
Q Consensus 213 ~~~~~~d~Vi~n~P~~-~~~~----~~---~~ll~~~~~~~~ 246 (281)
..||+|++...++ +..+ ++ .+.+++||.+-.
T Consensus 234 ---~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i 272 (332)
T 3i53_A 234 ---AGAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLV 272 (332)
T ss_dssp ---CSCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred ---CCCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 2689999865553 4332 22 366678877643
No 264
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.81 E-value=9.8e-09 Score=90.13 Aligned_cols=74 Identities=15% Similarity=0.188 Sum_probs=56.6
Q ss_pred CCCEEEEEcCCccH----HHHHHHHc-C-----CEEEEEeCCHHHHHHHHHHhc--------------------C---C-
Q 023482 141 EGDIVLEIGPGTGS----LTNVLLNA-G-----ATVLAIEKDQHMVGLVRERFA--------------------S---I- 186 (281)
Q Consensus 141 ~~~~VLDiGcG~G~----~t~~la~~-~-----~~v~gvD~s~~~l~~a~~~~~--------------------~---~- 186 (281)
++.+|||+|||||. +++.+++. + .+|+|+|+|+.|++.|+++.- . .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 34689999999998 66666664 2 599999999999999998641 0 1
Q ss_pred ---------CCeEEEEcCccccccccchhhHHHhhcCCCCccEEEEcC
Q 023482 187 ---------DQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANI 225 (281)
Q Consensus 187 ---------~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~ 225 (281)
.+|+|.++|+.+.+++ ..+.||+|++..
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~-----------~~~~fDlI~crn 221 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYN-----------VPGPFDAIFCRN 221 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCC-----------CCCCEEEEEECS
T ss_pred ceeechhhcccCeEEecccCCCCCC-----------cCCCeeEEEECC
Confidence 2699999999885542 126799999953
No 265
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.80 E-value=1.3e-08 Score=87.11 Aligned_cols=74 Identities=14% Similarity=0.029 Sum_probs=62.9
Q ss_pred CCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCC-CeEEEEcCccccccccchhhHHHhhcCCCCc
Q 023482 140 QEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHIRSHMLSLFERRKSSSGF 218 (281)
Q Consensus 140 ~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~-~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~ 218 (281)
.++.+|||||||+|.++..+. .+.+++|+|+|+.+++.++.+....+ +.++.++|....+++ +.+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~-~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~-------------~~~ 169 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER-GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPA-------------EAG 169 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT-TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCC-------------CBC
T ss_pred CCCCeEEEecCCccHHHHHhc-cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCC-------------CCc
Confidence 457799999999999999888 66799999999999999999986554 889999999887643 578
Q ss_pred cEEEEcCCC
Q 023482 219 AKVVANIPF 227 (281)
Q Consensus 219 d~Vi~n~P~ 227 (281)
|+|+++.-+
T Consensus 170 DvvLllk~l 178 (253)
T 3frh_A 170 DLALIFKLL 178 (253)
T ss_dssp SEEEEESCH
T ss_pred chHHHHHHH
Confidence 999988544
No 266
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.77 E-value=1.2e-08 Score=80.27 Aligned_cols=84 Identities=13% Similarity=0.294 Sum_probs=64.9
Q ss_pred CHHHHHHHHHHhcCCCCCEEEEEcCCcc-HHHHHHHH-cCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCcccccccc
Q 023482 126 NSEINDQLAAAAAVQEGDIVLEIGPGTG-SLTNVLLN-AGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRS 203 (281)
Q Consensus 126 ~~~~~~~l~~~l~~~~~~~VLDiGcG~G-~~t~~la~-~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d 203 (281)
...+.+++.+... ++.+|||||||.| ..+..|++ .+..|+++|+++.+++ +++.|+.+-..
T Consensus 22 ~e~LaeYI~~~~~--~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~-------------~v~dDiF~P~~-- 84 (153)
T 2k4m_A 22 WNDLAVYIIRCSG--PGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG-------------IVRDDITSPRM-- 84 (153)
T ss_dssp HHHHHHHHHHHSC--SSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT-------------EECCCSSSCCH--
T ss_pred HHHHHHHHHhcCC--CCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc-------------eEEccCCCCcc--
Confidence 3455666666654 4579999999999 59999997 7899999999998876 78899887332
Q ss_pred chhhHHHhhcCCCCccEEEE-cCCCcccHHHHH
Q 023482 204 HMLSLFERRKSSSGFAKVVA-NIPFNISTDVIK 235 (281)
Q Consensus 204 ~~~d~v~~~~~~~~~d~Vi~-n~P~~~~~~~~~ 235 (281)
++ ...||+|.+ |||.....++++
T Consensus 85 ---~~------Y~~~DLIYsirPP~El~~~i~~ 108 (153)
T 2k4m_A 85 ---EI------YRGAALIYSIRPPAEIHSSLMR 108 (153)
T ss_dssp ---HH------HTTEEEEEEESCCTTTHHHHHH
T ss_pred ---cc------cCCcCEEEEcCCCHHHHHHHHH
Confidence 11 147999965 899888888776
No 267
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.75 E-value=1.1e-08 Score=93.81 Aligned_cols=103 Identities=13% Similarity=0.121 Sum_probs=69.9
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCC------ccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccc
Q 023482 128 EINDQLAAAAAVQEGDIVLEIGPG------TGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVK 198 (281)
Q Consensus 128 ~~~~~l~~~l~~~~~~~VLDiGcG------~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~ 198 (281)
...+.++..+.. ++.+||||||| +|..+..+++. +++|+|||+++.|. ....+++++++|+.+
T Consensus 204 ~~Ye~lL~~l~~-~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~-------~~~~rI~fv~GDa~d 275 (419)
T 3sso_A 204 PHYDRHFRDYRN-QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH-------VDELRIRTIQGDQND 275 (419)
T ss_dssp HHHHHHHGGGTT-SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG-------GCBTTEEEEECCTTC
T ss_pred HHHHHHHHhhcC-CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh-------hcCCCcEEEEecccc
Confidence 445556655543 46799999999 77777777764 67999999999983 123599999999999
Q ss_pred cccccchhhHHHhhcCCCCccEEEEcCCCcccH-----HHHHHhccCCCCc
Q 023482 199 CHIRSHMLSLFERRKSSSGFAKVVANIPFNIST-----DVIKQLLPMGDIF 244 (281)
Q Consensus 199 ~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~-----~~~~~ll~~~~~~ 244 (281)
+++.+... ...+.||+|+++.-..+.. ..+.++|++||.+
T Consensus 276 lpf~~~l~------~~d~sFDlVisdgsH~~~d~~~aL~el~rvLKPGGvl 320 (419)
T 3sso_A 276 AEFLDRIA------RRYGPFDIVIDDGSHINAHVRTSFAALFPHVRPGGLY 320 (419)
T ss_dssp HHHHHHHH------HHHCCEEEEEECSCCCHHHHHHHHHHHGGGEEEEEEE
T ss_pred cchhhhhh------cccCCccEEEECCcccchhHHHHHHHHHHhcCCCeEE
Confidence 87642111 0127899999975432211 2234667777655
No 268
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.75 E-value=8.6e-08 Score=80.17 Aligned_cols=118 Identities=14% Similarity=0.166 Sum_probs=79.1
Q ss_pred ccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCCC-----CeEEEEcCc
Q 023482 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASID-----QLKVLQEDF 196 (281)
Q Consensus 123 ~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~~~~~~-----~v~~~~gD~ 196 (281)
....+...+.+...+ .+.++|||+|| |++|+.+++. +++|++||.+++..+.|++++++.+ +|+++.||+
T Consensus 14 ~~v~~~~~~~L~~~l--~~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda 89 (202)
T 3cvo_A 14 LTMPPAEAEALRMAY--EEAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDI 89 (202)
T ss_dssp CCSCHHHHHHHHHHH--HHCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCC
T ss_pred ccCCHHHHHHHHHHh--hCCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCc
Confidence 345555555555544 36789999998 5899999987 6899999999999999999987543 799999997
Q ss_pred ccc-----ccccchhhHHHh----h---cCCCCccEEEEcCCCc-ccHHHHHHhccCCCCc
Q 023482 197 VKC-----HIRSHMLSLFER----R---KSSSGFAKVVANIPFN-ISTDVIKQLLPMGDIF 244 (281)
Q Consensus 197 ~~~-----~~~d~~~d~v~~----~---~~~~~~d~Vi~n~P~~-~~~~~~~~ll~~~~~~ 244 (281)
.+. |.....++.+.. + ...+.||+||.+-.+. ...+....++++|+.+
T Consensus 90 ~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~~~~~~~~l~~l~~GG~I 150 (202)
T 3cvo_A 90 GPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFRVGCALATAFSITRPVTL 150 (202)
T ss_dssp SSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSSHHHHHHHHHHHCSSCEEE
T ss_pred hhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCCchhHHHHHHHhcCCCeEE
Confidence 653 111111111110 0 1236799999987643 2223334677777655
No 269
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.72 E-value=1.7e-08 Score=87.28 Aligned_cols=77 Identities=12% Similarity=0.197 Sum_probs=64.7
Q ss_pred CCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCCC-CeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 140 QEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 140 ~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~~-~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
.++.+|||||||+|.++..++.. .++|+++|+|+.+++.++.++..++ +.++.+.|...-+. .+
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p-------------~~ 197 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRL-------------DE 197 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCC-------------CS
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCC-------------CC
Confidence 34679999999999999999876 5699999999999999999998765 78999999876543 37
Q ss_pred CccEEEEcCCCcc
Q 023482 217 GFAKVVANIPFNI 229 (281)
Q Consensus 217 ~~d~Vi~n~P~~~ 229 (281)
.+|+++++.-++.
T Consensus 198 ~~DvaL~lkti~~ 210 (281)
T 3lcv_B 198 PADVTLLLKTLPC 210 (281)
T ss_dssp CCSEEEETTCHHH
T ss_pred CcchHHHHHHHHH
Confidence 7999999876543
No 270
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.71 E-value=9.8e-09 Score=85.97 Aligned_cols=85 Identities=13% Similarity=0.188 Sum_probs=62.0
Q ss_pred HHHHHhc-CCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHH
Q 023482 132 QLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFE 210 (281)
Q Consensus 132 ~l~~~l~-~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~ 210 (281)
.+++.+. ..++.+|||||||+|.++..+ +.+|+|+|+++. +++++++|+.++++.
T Consensus 57 ~~~~~l~~~~~~~~vLDiG~G~G~~~~~l---~~~v~~~D~s~~-------------~~~~~~~d~~~~~~~-------- 112 (215)
T 2zfu_A 57 RIARDLRQRPASLVVADFGCGDCRLASSI---RNPVHCFDLASL-------------DPRVTVCDMAQVPLE-------- 112 (215)
T ss_dssp HHHHHHHTSCTTSCEEEETCTTCHHHHHC---CSCEEEEESSCS-------------STTEEESCTTSCSCC--------
T ss_pred HHHHHHhccCCCCeEEEECCcCCHHHHHh---hccEEEEeCCCC-------------CceEEEeccccCCCC--------
Confidence 3444443 346679999999999999877 368999999987 467899999987753
Q ss_pred hhcCCCCccEEEEcCCCcccH-----HHHHHhccCCCCc
Q 023482 211 RRKSSSGFAKVVANIPFNIST-----DVIKQLLPMGDIF 244 (281)
Q Consensus 211 ~~~~~~~~d~Vi~n~P~~~~~-----~~~~~ll~~~~~~ 244 (281)
.+.||+|+++..+++.. ..+.++++++|.+
T Consensus 113 ----~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l 147 (215)
T 2zfu_A 113 ----DESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLL 147 (215)
T ss_dssp ----TTCEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEE
T ss_pred ----CCCEeEEEEehhccccCHHHHHHHHHHhCCCCeEE
Confidence 36799999987665321 2234677777765
No 271
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.70 E-value=3e-08 Score=89.85 Aligned_cols=79 Identities=24% Similarity=0.332 Sum_probs=63.0
Q ss_pred CCCEEEEEcCCccHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhcCC----------CCeEEEEcCccccccccchhhHH
Q 023482 141 EGDIVLEIGPGTGSLTNVLLNAG-ATVLAIEKDQHMVGLVRERFASI----------DQLKVLQEDFVKCHIRSHMLSLF 209 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~la~~~-~~v~gvD~s~~~l~~a~~~~~~~----------~~v~~~~gD~~~~~~~d~~~d~v 209 (281)
.+++||+||||+|.++..+++.+ .+|++||+|+.+++.|+++++.. ++++++.+|+.++--. ..
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~-----~~ 262 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKR-----YA 262 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHH-----HH
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHh-----hh
Confidence 46799999999999999998874 58999999999999999997631 1699999999875310 00
Q ss_pred HhhcCCCCccEEEEcCCC
Q 023482 210 ERRKSSSGFAKVVANIPF 227 (281)
Q Consensus 210 ~~~~~~~~~d~Vi~n~P~ 227 (281)
...+.||+||.++|.
T Consensus 263 ---~~~~~fDvII~D~~d 277 (364)
T 2qfm_A 263 ---KEGREFDYVINDLTA 277 (364)
T ss_dssp ---HHTCCEEEEEEECCS
T ss_pred ---ccCCCceEEEECCCC
Confidence 134789999999854
No 272
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.61 E-value=7.3e-08 Score=87.11 Aligned_cols=98 Identities=18% Similarity=0.307 Sum_probs=68.6
Q ss_pred HHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcC---CCCeEEEEcCccccccccch
Q 023482 131 DQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFAS---IDQLKVLQEDFVKCHIRSHM 205 (281)
Q Consensus 131 ~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~---~~~v~~~~gD~~~~~~~d~~ 205 (281)
..+++.+...++.+|||||||+|.++..+++. +.+++++|+ +.++. +++... .++++++.+|+.+ +
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~-~----- 244 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLR-E----- 244 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTT-C-----
T ss_pred HHHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCC-C-----
Confidence 45666667777889999999999999999986 458999999 45554 322221 2479999999972 2
Q ss_pred hhHHHhhcCCCCccEEEEcCCCc-ccHH----H---HHHhccCCCCcce
Q 023482 206 LSLFERRKSSSGFAKVVANIPFN-ISTD----V---IKQLLPMGDIFSE 246 (281)
Q Consensus 206 ~d~v~~~~~~~~~d~Vi~n~P~~-~~~~----~---~~~ll~~~~~~~~ 246 (281)
. + .||+|+++..++ +..+ + +.+.+++||.+-.
T Consensus 245 -------~-p-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i 284 (348)
T 3lst_A 245 -------V-P-HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLV 284 (348)
T ss_dssp -------C-C-CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEE
T ss_pred -------C-C-CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 1 2 689999876554 3332 2 2467788887643
No 273
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.59 E-value=1.4e-07 Score=86.02 Aligned_cols=97 Identities=7% Similarity=0.134 Sum_probs=70.6
Q ss_pred HHHHHHhc-CCCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhh
Q 023482 131 DQLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLS 207 (281)
Q Consensus 131 ~~l~~~l~-~~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d 207 (281)
..++..+. ..++.+|||||||+|..+..+++. ..+++++|+ +.+++.|++ .++++++.+|+.+ +++
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~----~~~v~~~~~d~~~-~~~----- 266 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP----LSGIEHVGGDMFA-SVP----- 266 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----CTTEEEEECCTTT-CCC-----
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh----cCCCEEEeCCccc-CCC-----
Confidence 44555554 556789999999999999999987 458999999 999987764 2479999999987 532
Q ss_pred HHHhhcCCCCccEEEEcCCCc-ccHH----H---HHHhccCCCCcceE
Q 023482 208 LFERRKSSSGFAKVVANIPFN-ISTD----V---IKQLLPMGDIFSEV 247 (281)
Q Consensus 208 ~v~~~~~~~~~d~Vi~n~P~~-~~~~----~---~~~ll~~~~~~~~~ 247 (281)
. ||+|+++..++ +..+ + +.+.++++|.+-..
T Consensus 267 --------~-~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 267 --------Q-GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp --------C-EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --------C-CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 2 89999876654 3332 2 23666777765433
No 274
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.58 E-value=1.1e-07 Score=86.70 Aligned_cols=96 Identities=11% Similarity=0.240 Sum_probs=69.1
Q ss_pred HHHHHhc-CCCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhH
Q 023482 132 QLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSL 208 (281)
Q Consensus 132 ~l~~~l~-~~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~ 208 (281)
.++..+. ..+..+|||||||+|.++..+++. +.+++++|+ +.+++.|++ .++++++.+|+.+ +++
T Consensus 193 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~d~~~-~~p------ 260 (368)
T 3reo_A 193 KILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA----FSGVEHLGGDMFD-GVP------ 260 (368)
T ss_dssp HHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----CTTEEEEECCTTT-CCC------
T ss_pred HHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh----cCCCEEEecCCCC-CCC------
Confidence 3444444 456689999999999999999986 569999999 888877653 2589999999987 542
Q ss_pred HHhhcCCCCccEEEEcCCCc-ccHH----HH---HHhccCCCCcceE
Q 023482 209 FERRKSSSGFAKVVANIPFN-ISTD----VI---KQLLPMGDIFSEV 247 (281)
Q Consensus 209 v~~~~~~~~~d~Vi~n~P~~-~~~~----~~---~~ll~~~~~~~~~ 247 (281)
.. |+|+....++ +..+ ++ .+.+++++.+...
T Consensus 261 -------~~-D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~ 299 (368)
T 3reo_A 261 -------KG-DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVA 299 (368)
T ss_dssp -------CC-SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred -------CC-CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 22 8888876554 4332 22 3667888866433
No 275
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.54 E-value=2.3e-07 Score=84.51 Aligned_cols=98 Identities=13% Similarity=0.225 Sum_probs=71.0
Q ss_pred HHHHHHHhc-CCCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchh
Q 023482 130 NDQLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHML 206 (281)
Q Consensus 130 ~~~l~~~l~-~~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~ 206 (281)
...++..+. ..+..+|||||||+|.++..+++. +.+++++|+ +.+++.|++ .++++++.+|+.+ +++
T Consensus 189 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~D~~~-~~p---- 258 (364)
T 3p9c_A 189 TKKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ----FPGVTHVGGDMFK-EVP---- 258 (364)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----CTTEEEEECCTTT-CCC----
T ss_pred HHHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh----cCCeEEEeCCcCC-CCC----
Confidence 344555555 556789999999999999999986 569999999 888877653 2589999999987 643
Q ss_pred hHHHhhcCCCCccEEEEcCCCc-ccH----HHH---HHhccCCCCcceE
Q 023482 207 SLFERRKSSSGFAKVVANIPFN-IST----DVI---KQLLPMGDIFSEV 247 (281)
Q Consensus 207 d~v~~~~~~~~~d~Vi~n~P~~-~~~----~~~---~~ll~~~~~~~~~ 247 (281)
.. |+|+....++ +.. .++ .+.+++++.+...
T Consensus 259 ---------~~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~ 297 (364)
T 3p9c_A 259 ---------SG-DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLV 297 (364)
T ss_dssp ---------CC-SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred ---------CC-CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 22 8888865553 433 222 3667888866443
No 276
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.53 E-value=1.8e-07 Score=84.66 Aligned_cols=89 Identities=11% Similarity=0.253 Sum_probs=66.4
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 139 VQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 139 ~~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
..++.+|||||||+|.++..+++. +.+++++|+ +.+++.|++ .++++++.+|+.+ ++ .
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~d~~~-~~--------------p 245 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG----SNNLTYVGGDMFT-SI--------------P 245 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----BTTEEEEECCTTT-CC--------------C
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc----CCCcEEEeccccC-CC--------------C
Confidence 346679999999999999999987 569999999 999987764 2469999999976 43 1
Q ss_pred CccEEEEcCCCc-ccHH----H---HHHhccC---CCCcceE
Q 023482 217 GFAKVVANIPFN-ISTD----V---IKQLLPM---GDIFSEV 247 (281)
Q Consensus 217 ~~d~Vi~n~P~~-~~~~----~---~~~ll~~---~~~~~~~ 247 (281)
.||+|+++..++ +..+ + +.+.+++ +|.+-..
T Consensus 246 ~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~ 287 (352)
T 1fp2_A 246 NADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTII 287 (352)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEE
T ss_pred CccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 389999876654 3332 2 2366677 7765433
No 277
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.49 E-value=2.1e-07 Score=82.24 Aligned_cols=83 Identities=19% Similarity=0.258 Sum_probs=59.2
Q ss_pred cCCCCCEEEEEcC------CccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCCCCeEE-EEcCccccccccchhh
Q 023482 138 AVQEGDIVLEIGP------GTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASIDQLKV-LQEDFVKCHIRSHMLS 207 (281)
Q Consensus 138 ~~~~~~~VLDiGc------G~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~~~v~~-~~gD~~~~~~~d~~~d 207 (281)
.+.++.+|||+|| |+|. ..+++. +++|+|+|+++. + .++++ +++|+.++++.
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v---~~v~~~i~gD~~~~~~~----- 121 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V---SDADSTLIGDCATVHTA----- 121 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B---CSSSEEEESCGGGCCCS-----
T ss_pred CCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C---CCCEEEEECccccCCcc-----
Confidence 4567889999999 4476 334443 479999999998 1 37889 99999887542
Q ss_pred HHHhhcCCCCccEEEEcCCCcc-----------------cHHHHHHhccCCCCcce
Q 023482 208 LFERRKSSSGFAKVVANIPFNI-----------------STDVIKQLLPMGDIFSE 246 (281)
Q Consensus 208 ~v~~~~~~~~~d~Vi~n~P~~~-----------------~~~~~~~ll~~~~~~~~ 246 (281)
+.||+|++|++.+. .-..+.++|++||.|..
T Consensus 122 --------~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~ 169 (290)
T 2xyq_A 122 --------NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAV 169 (290)
T ss_dssp --------SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEE
T ss_pred --------CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEE
Confidence 57999999965332 12334577888887643
No 278
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.47 E-value=8.9e-07 Score=80.26 Aligned_cols=100 Identities=13% Similarity=0.230 Sum_probs=72.1
Q ss_pred HHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEcCccccccccchh
Q 023482 131 DQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHML 206 (281)
Q Consensus 131 ~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~gD~~~~~~~d~~~ 206 (281)
..++.........+|+|||||+|.++..++++ +.+++.+|. |.+++.|+++.... ++|+++.+|+.+.+.
T Consensus 169 ~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~----- 242 (353)
T 4a6d_A 169 RSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPL----- 242 (353)
T ss_dssp HHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCC-----
T ss_pred HHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCC-----
Confidence 34455555566789999999999999999997 558888887 88999999887643 489999999987543
Q ss_pred hHHHhhcCCCCccEEEEc-CCCcccHH----HHH---HhccCCCCcc
Q 023482 207 SLFERRKSSSGFAKVVAN-IPFNISTD----VIK---QLLPMGDIFS 245 (281)
Q Consensus 207 d~v~~~~~~~~~d~Vi~n-~P~~~~~~----~~~---~ll~~~~~~~ 245 (281)
..+|+++.. .-..|..+ +++ +.+++++.+-
T Consensus 243 ---------~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~ll 280 (353)
T 4a6d_A 243 ---------PEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGIL 280 (353)
T ss_dssp ---------CCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEE
T ss_pred ---------CCceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEE
Confidence 345777764 44445543 233 4457777653
No 279
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.40 E-value=4.1e-07 Score=82.41 Aligned_cols=87 Identities=15% Similarity=0.284 Sum_probs=65.0
Q ss_pred CCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 140 QEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 140 ~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
.++.+|||||||+|.++..+++. +.+++++|+ +.+++.|++ ..+++++.+|+.+ ++ ..
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~d~~~-~~--------------~~ 251 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG----NENLNFVGGDMFK-SI--------------PS 251 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC----CSSEEEEECCTTT-CC--------------CC
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc----CCCcEEEeCccCC-CC--------------CC
Confidence 45679999999999999999987 458999999 788876654 2469999999987 53 24
Q ss_pred ccEEEEcCCCc-ccH----HHH---HHhccC---CCCcce
Q 023482 218 FAKVVANIPFN-IST----DVI---KQLLPM---GDIFSE 246 (281)
Q Consensus 218 ~d~Vi~n~P~~-~~~----~~~---~~ll~~---~~~~~~ 246 (281)
||+|+++..++ +.. .++ .+.+++ ++.+-.
T Consensus 252 ~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i 291 (358)
T 1zg3_A 252 ADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVII 291 (358)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEE
T ss_pred ceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence 89999987665 333 222 356677 776543
No 280
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.34 E-value=2.6e-07 Score=74.85 Aligned_cols=85 Identities=13% Similarity=0.147 Sum_probs=63.5
Q ss_pred hcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 137 AAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 137 l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
+++.++.+|||+|||. +++|+++.|++.|+++... +++++++|+.++++.. ...+
T Consensus 8 ~g~~~g~~vL~~~~g~--------------v~vD~s~~ml~~a~~~~~~--~~~~~~~d~~~~~~~~---------~~~~ 62 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS--------------SPVEALKGLVDKLQALTGN--EGRVSVENIKQLLQSA---------HKES 62 (176)
T ss_dssp TTCCTTSEEEEEECTT--------------SCHHHHHHHHHHHHHHTTT--TSEEEEEEGGGGGGGC---------CCSS
T ss_pred cCCCCCCEEEEecCCc--------------eeeeCCHHHHHHHHHhccc--CcEEEEechhcCcccc---------CCCC
Confidence 4567889999999996 2499999999999998753 5999999999887510 0236
Q ss_pred CccEEEEcCCCccc----H---HHHHHhccCCCCcce
Q 023482 217 GFAKVVANIPFNIS----T---DVIKQLLPMGDIFSE 246 (281)
Q Consensus 217 ~~d~Vi~n~P~~~~----~---~~~~~ll~~~~~~~~ 246 (281)
.||+|+++..+++. . ..+.+++++||.+..
T Consensus 63 ~fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~ 99 (176)
T 2ld4_A 63 SFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFL 99 (176)
T ss_dssp CEEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEE
T ss_pred CEeEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEE
Confidence 89999997555433 2 334588888887644
No 281
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.30 E-value=1.6e-06 Score=76.74 Aligned_cols=61 Identities=28% Similarity=0.345 Sum_probs=54.5
Q ss_pred cCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC
Q 023482 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFAS 185 (281)
Q Consensus 124 ~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~ 185 (281)
..+..+++.+++... .+++.|||++||+|..+..++..+.+++|+|+++.+++.|++++..
T Consensus 219 ~~p~~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 219 PFPLELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp CSCHHHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHH
Confidence 356788888888876 5788999999999999999999999999999999999999998864
No 282
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.27 E-value=3.9e-06 Score=74.97 Aligned_cols=94 Identities=12% Similarity=0.263 Sum_probs=73.4
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCcccccccc
Q 023482 127 SEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRS 203 (281)
Q Consensus 127 ~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d 203 (281)
+-+.+.+++.+.+.++..++|..||.|..+..+++. .++|+|+|.|+.+++.|+ ++. .++++++++++.+++-
T Consensus 43 pVLl~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~-~~Rv~lv~~nF~~l~~-- 118 (347)
T 3tka_A 43 TVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TID-DPRFSIIHGPFSALGE-- 118 (347)
T ss_dssp CTTTHHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCC-CTTEEEEESCGGGHHH--
T ss_pred cccHHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhc-CCcEEEEeCCHHHHHH--
Confidence 346677888888889999999999999999999986 359999999999999985 442 3589999999988742
Q ss_pred chhhHHHhhcCCCCccEEEEcCCCc
Q 023482 204 HMLSLFERRKSSSGFAKVVANIPFN 228 (281)
Q Consensus 204 ~~~d~v~~~~~~~~~d~Vi~n~P~~ 228 (281)
.+......+.+|.|+.|+.++
T Consensus 119 ----~L~~~g~~~~vDgILfDLGVS 139 (347)
T 3tka_A 119 ----YVAERDLIGKIDGILLDLGVS 139 (347)
T ss_dssp ----HHHHTTCTTCEEEEEEECSCC
T ss_pred ----HHHhcCCCCcccEEEECCccC
Confidence 111101113689999998875
No 283
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.18 E-value=2.4e-06 Score=82.78 Aligned_cols=89 Identities=18% Similarity=0.288 Sum_probs=61.0
Q ss_pred CCEEEEEcCCccHHHHHHH---Hc-CC--EEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCccccccccchhhHHHhh
Q 023482 142 GDIVLEIGPGTGSLTNVLL---NA-GA--TVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRSHMLSLFERR 212 (281)
Q Consensus 142 ~~~VLDiGcG~G~~t~~la---~~-~~--~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~~~~~~d~~~d~v~~~ 212 (281)
+..|||+|||+|.+....+ +. +. +|+|||.++. ...|++....+ ++|++++||++++..+
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~-A~~a~~~v~~N~~~dkVtVI~gd~eev~LP---------- 426 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN-AVVTLENWQFEEWGSQVTVVSSDMREWVAP---------- 426 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH-HHHHHHHHHHHTTGGGEEEEESCTTTCCCS----------
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH-HHHHHHHHHhccCCCeEEEEeCcceeccCC----------
Confidence 3579999999999844443 33 22 7899999984 55566665543 3899999999998643
Q ss_pred cCCCCccEEEEcC----CCcccH-HHH---HHhccCCCCc
Q 023482 213 KSSSGFAKVVANI----PFNIST-DVI---KQLLPMGDIF 244 (281)
Q Consensus 213 ~~~~~~d~Vi~n~----P~~~~~-~~~---~~ll~~~~~~ 244 (281)
.+.|+||+-. -++... .++ +++|+++|.+
T Consensus 427 ---EKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGim 463 (637)
T 4gqb_A 427 ---EKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVS 463 (637)
T ss_dssp ---SCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEE
T ss_pred ---cccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEE
Confidence 6799999842 222222 222 4777777655
No 284
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.14 E-value=7.7e-06 Score=74.15 Aligned_cols=86 Identities=20% Similarity=0.260 Sum_probs=63.8
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCCc
Q 023482 139 VQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGF 218 (281)
Q Consensus 139 ~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~ 218 (281)
+.+|.+|||+||++|..|..+++++++|+|||+.+ |-. .+...++|+++.+|+.+.... .+.+
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~-l~~----~l~~~~~V~~~~~d~~~~~~~------------~~~~ 271 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGP-MAQ----SLMDTGQVTWLREDGFKFRPT------------RSNI 271 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTCEEEEECSSC-CCH----HHHTTTCEEEECSCTTTCCCC------------SSCE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhh-cCh----hhccCCCeEEEeCccccccCC------------CCCc
Confidence 45789999999999999999999999999999763 222 222346999999999887632 3679
Q ss_pred cEEEEcCCCcc--cHHHHHHhccCC
Q 023482 219 AKVVANIPFNI--STDVIKQLLPMG 241 (281)
Q Consensus 219 d~Vi~n~P~~~--~~~~~~~ll~~~ 241 (281)
|.|++++-.+. ....+.+++..+
T Consensus 272 D~vvsDm~~~p~~~~~l~~~wl~~~ 296 (375)
T 4auk_A 272 SWMVCDMVEKPAKVAALMAQWLVNG 296 (375)
T ss_dssp EEEEECCSSCHHHHHHHHHHHHHTT
T ss_pred CEEEEcCCCChHHhHHHHHHHHhcc
Confidence 99999865443 224455655544
No 285
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.13 E-value=1.5e-05 Score=70.32 Aligned_cols=95 Identities=21% Similarity=0.278 Sum_probs=73.1
Q ss_pred CCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcC-------CCCeEEEEcCccccccccchhhHHH
Q 023482 140 QEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFAS-------IDQLKVLQEDFVKCHIRSHMLSLFE 210 (281)
Q Consensus 140 ~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~-------~~~v~~~~gD~~~~~~~d~~~d~v~ 210 (281)
..+++||-||-|.|..+..+++. ..+|+.||+|+..++.+++.+.. .++++++.+|+.++--
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~--------- 152 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVN--------- 152 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTS---------
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHh---------
Confidence 45679999999999999999987 45999999999999999987642 2489999999988632
Q ss_pred hhcCCCCccEEEEcCCCc----------ccHHHHHHhccCCCCcc
Q 023482 211 RRKSSSGFAKVVANIPFN----------ISTDVIKQLLPMGDIFS 245 (281)
Q Consensus 211 ~~~~~~~~d~Vi~n~P~~----------~~~~~~~~ll~~~~~~~ 245 (281)
.....||+||.+.+-. ..-..+++.|+++|.+.
T Consensus 153 --~~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v 195 (294)
T 3o4f_A 153 --QTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFV 195 (294)
T ss_dssp --CSSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEE
T ss_pred --hccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEE
Confidence 3457899999875321 11245567777777663
No 286
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.08 E-value=3.9e-07 Score=79.63 Aligned_cols=81 Identities=11% Similarity=-0.008 Sum_probs=66.0
Q ss_pred CCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCCccE
Q 023482 141 EGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAK 220 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~ 220 (281)
.+..+||+-+|+|.+++.+.+.+.+++.+|.++..++..++|+...++++++++|+...-.. + ......||+
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~-----l---~~~~~~fdL 162 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNA-----L---LPPPEKRGL 162 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHH-----H---CSCTTSCEE
T ss_pred cCCCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHH-----h---cCCCCCccE
Confidence 35568999999999999999877799999999999999999998766899999997653100 0 022346999
Q ss_pred EEEcCCCcc
Q 023482 221 VVANIPFNI 229 (281)
Q Consensus 221 Vi~n~P~~~ 229 (281)
|+.+|||..
T Consensus 163 VfiDPPYe~ 171 (283)
T 2oo3_A 163 IFIDPSYER 171 (283)
T ss_dssp EEECCCCCS
T ss_pred EEECCCCCC
Confidence 999999984
No 287
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.06 E-value=5.2e-06 Score=75.40 Aligned_cols=96 Identities=23% Similarity=0.301 Sum_probs=75.6
Q ss_pred cccCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhcCC--------CCeEE
Q 023482 122 HYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG--ATVLAIEKDQHMVGLVRERFASI--------DQLKV 191 (281)
Q Consensus 122 ~~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~--~~v~gvD~s~~~l~~a~~~~~~~--------~~v~~ 191 (281)
.|+.+..........+.+++|.+|||+++|.|.=|..|++.+ ..|+++|+++..++.+++++.+. .++.+
T Consensus 129 d~~iQd~aS~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v 208 (359)
T 4fzv_A 129 EYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRV 208 (359)
T ss_dssp SEEEECGGGHHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEE
T ss_pred chhhhCHHHHHHHHHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEE
Confidence 344444455556667788999999999999999999998874 38999999999999998887532 37899
Q ss_pred EEcCccccccccchhhHHHhhcCCCCccEEEEcCCCc
Q 023482 192 LQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFN 228 (281)
Q Consensus 192 ~~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~ 228 (281)
...|+..++. ...+.||.|+.+.|=.
T Consensus 209 ~~~D~~~~~~-----------~~~~~fD~VLlDaPCS 234 (359)
T 4fzv_A 209 TSWDGRKWGE-----------LEGDTYDRVLVDVPCT 234 (359)
T ss_dssp ECCCGGGHHH-----------HSTTCEEEEEEECCCC
T ss_pred EeCchhhcch-----------hccccCCEEEECCccC
Confidence 9999887642 2347899999998843
No 288
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.02 E-value=5.9e-06 Score=80.40 Aligned_cols=96 Identities=10% Similarity=0.162 Sum_probs=63.6
Q ss_pred CCEEEEEcCCccHHHHHH---HH-cC-----------CEEEEEeCCHHHHHHHHHHhc-CC-CCeEEEEcCccccccccc
Q 023482 142 GDIVLEIGPGTGSLTNVL---LN-AG-----------ATVLAIEKDQHMVGLVRERFA-SI-DQLKVLQEDFVKCHIRSH 204 (281)
Q Consensus 142 ~~~VLDiGcG~G~~t~~l---a~-~~-----------~~v~gvD~s~~~l~~a~~~~~-~~-~~v~~~~gD~~~~~~~d~ 204 (281)
+..|||||||+|.+.... ++ .+ .+|+|||.++.++..++.... .. ++|+++++|++++.++..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 458999999999996432 21 12 299999999987766655443 22 379999999999864210
Q ss_pred hhhHHHhhcCCCCccEEEEcCC-C----cccHHHH---HHhccCCCCc
Q 023482 205 MLSLFERRKSSSGFAKVVANIP-F----NISTDVI---KQLLPMGDIF 244 (281)
Q Consensus 205 ~~d~v~~~~~~~~~d~Vi~n~P-~----~~~~~~~---~~ll~~~~~~ 244 (281)
. ....+.|+||+-+. + ....+.+ .++|+++|.+
T Consensus 490 ~-------~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~ 530 (745)
T 3ua3_A 490 D-------RGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTIS 530 (745)
T ss_dssp H-------TTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEE
T ss_pred c-------CCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEE
Confidence 0 12478999999654 1 2222333 3777777755
No 289
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.02 E-value=3.5e-06 Score=73.07 Aligned_cols=97 Identities=16% Similarity=0.080 Sum_probs=62.0
Q ss_pred CCCEEEEEcCCccHHHHHHHHc-------C-------CEEEEEeCCH---HHHH-----------HHHHHhcC-------
Q 023482 141 EGDIVLEIGPGTGSLTNVLLNA-------G-------ATVLAIEKDQ---HMVG-----------LVRERFAS------- 185 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~la~~-------~-------~~v~gvD~s~---~~l~-----------~a~~~~~~------- 185 (281)
++.+|||||+|+|+.++.+++. . .+++++|.+| +.+. .|++.+..
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4569999999999998886542 1 3899999886 4444 55555432
Q ss_pred -------C--CCeEEEEcCcccc-ccccchhhHHHhhcCCCCccEEEEcC--CCc----ccHH---HHHHhccCCCCcc
Q 023482 186 -------I--DQLKVLQEDFVKC-HIRSHMLSLFERRKSSSGFAKVVANI--PFN----ISTD---VIKQLLPMGDIFS 245 (281)
Q Consensus 186 -------~--~~v~~~~gD~~~~-~~~d~~~d~v~~~~~~~~~d~Vi~n~--P~~----~~~~---~~~~ll~~~~~~~ 245 (281)
. .+++++.||+.+. +..+. .....||+|+.++ |-. |..+ .+.+++++++.+.
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~--------~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~ 210 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDD--------SLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLA 210 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCG--------GGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhccc--------ccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEE
Confidence 1 2688999999873 32110 0013799999874 321 2333 3456777777653
No 290
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=98.00 E-value=1.9e-05 Score=68.36 Aligned_cols=61 Identities=15% Similarity=0.221 Sum_probs=54.1
Q ss_pred cCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC
Q 023482 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFAS 185 (281)
Q Consensus 124 ~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~ 185 (281)
..+..+++.+++... .+++.|||.+||+|..+.+..+.+.+++|+|+++.+++.|++++..
T Consensus 196 ~~p~~l~~~~i~~~~-~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 196 PKPRDLIERIIRASS-NPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp CCCHHHHHHHHHHHC-CTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHh
Confidence 455778888888765 6788999999999999999999999999999999999999999874
No 291
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.76 E-value=7.5e-05 Score=68.21 Aligned_cols=77 Identities=22% Similarity=0.223 Sum_probs=61.2
Q ss_pred CEEEEEcCCccHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCCccEE
Q 023482 143 DIVLEIGPGTGSLTNVLLNAGAT-VLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKV 221 (281)
Q Consensus 143 ~~VLDiGcG~G~~t~~la~~~~~-v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~V 221 (281)
-+++|+.||.|.++..+.+.|.+ |.++|+++.+++..+.|+. +..++++|+.++...+ +.........+|+|
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~---~~~~~~~DI~~~~~~~----~~~~~~~~~~~D~i 75 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFP---RSLHVQEDVSLLNAEI----IKGFFKNDMPIDGI 75 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCT---TSEEECCCGGGCCHHH----HHHHHCSCCCCCEE
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCC---CCceEecChhhcCHHH----HHhhcccCCCeeEE
Confidence 47999999999999999998885 6699999999999998875 6788999999876432 11000134679999
Q ss_pred EEcCC
Q 023482 222 VANIP 226 (281)
Q Consensus 222 i~n~P 226 (281)
++.||
T Consensus 76 ~ggpP 80 (376)
T 3g7u_A 76 IGGPP 80 (376)
T ss_dssp EECCC
T ss_pred EecCC
Confidence 99998
No 292
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.70 E-value=3.5e-05 Score=69.49 Aligned_cols=74 Identities=20% Similarity=0.312 Sum_probs=58.7
Q ss_pred CEEEEEcCCccHHHHHHHHcC--C-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCCcc
Q 023482 143 DIVLEIGPGTGSLTNVLLNAG--A-TVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFA 219 (281)
Q Consensus 143 ~~VLDiGcG~G~~t~~la~~~--~-~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d 219 (281)
.+|+|+.||+|.++..+...| . .|.++|+++.+++..+.|+. +..++++|+.++...+ + ....+|
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~---~~~~~~~Di~~~~~~~-----~----~~~~~D 70 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP---HTQLLAKTIEGITLEE-----F----DRLSFD 70 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT---TSCEECSCGGGCCHHH-----H----HHHCCS
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc---ccccccCCHHHccHhH-----c----CcCCcC
Confidence 479999999999999999887 3 69999999999999999986 4457899998875321 1 012589
Q ss_pred EEEEcCCCc
Q 023482 220 KVVANIPFN 228 (281)
Q Consensus 220 ~Vi~n~P~~ 228 (281)
+|+++||.+
T Consensus 71 ~l~~gpPCq 79 (343)
T 1g55_A 71 MILMSPPCQ 79 (343)
T ss_dssp EEEECCC--
T ss_pred EEEEcCCCc
Confidence 999999943
No 293
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.68 E-value=0.00018 Score=64.42 Aligned_cols=74 Identities=18% Similarity=0.232 Sum_probs=59.9
Q ss_pred CCEEEEEcCCccHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCCccE
Q 023482 142 GDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAK 220 (281)
Q Consensus 142 ~~~VLDiGcG~G~~t~~la~~~~-~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~ 220 (281)
+.+++|+.||+|.++..+...|. .+.++|+++.+++..+.|+.... ++|+.++...+ ...+|+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~~-----~~Di~~~~~~~-----------~~~~D~ 74 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKP-----EGDITQVNEKT-----------IPDHDI 74 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCCC-----BSCGGGSCGGG-----------SCCCSE
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCCC-----cCCHHHcCHhh-----------CCCCCE
Confidence 46899999999999999999887 58889999999999999986422 78988875321 245899
Q ss_pred EEEcCCCcccH
Q 023482 221 VVANIPFNIST 231 (281)
Q Consensus 221 Vi~n~P~~~~~ 231 (281)
|++.||.+-.+
T Consensus 75 l~~gpPCQ~fS 85 (327)
T 2c7p_A 75 LCAGFPCQAFS 85 (327)
T ss_dssp EEEECCCTTTC
T ss_pred EEECCCCCCcc
Confidence 99999986443
No 294
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.49 E-value=5.9e-05 Score=65.47 Aligned_cols=104 Identities=13% Similarity=0.128 Sum_probs=62.6
Q ss_pred HHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHhcCCC-CeEEEEcCccccccccchh
Q 023482 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-GA-TVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHIRSHML 206 (281)
Q Consensus 130 ~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~-~~-~v~gvD~s~~~l~~a~~~~~~~~-~v~~~~gD~~~~~~~d~~~ 206 (281)
+..+.+...+.++.+|||+|||+|.++..++.. +. .++|+|+...+....... ...+ ++..+.+++....
T Consensus 63 L~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~~g~~ii~~~~~~dv~~------ 135 (277)
T 3evf_A 63 LRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QSLGWNIITFKDKTDIHR------ 135 (277)
T ss_dssp HHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CBTTGGGEEEECSCCTTT------
T ss_pred HHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-CcCCCCeEEEeccceehh------
Confidence 334444445567789999999999999988876 33 788898874431110000 0011 5555666654333
Q ss_pred hHHHhhcCCCCccEEEEcCCCc----ccH--------HHHHHhccCC-CCcce
Q 023482 207 SLFERRKSSSGFAKVVANIPFN----IST--------DVIKQLLPMG-DIFSE 246 (281)
Q Consensus 207 d~v~~~~~~~~~d~Vi~n~P~~----~~~--------~~~~~ll~~~-~~~~~ 246 (281)
..+..+|+|+++.-.+ +.. .+..++|+++ |.|..
T Consensus 136 ------l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~ 182 (277)
T 3evf_A 136 ------LEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCV 182 (277)
T ss_dssp ------SCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred ------cCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 2346799999986444 111 2234677777 76633
No 295
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.42 E-value=0.00043 Score=62.93 Aligned_cols=77 Identities=25% Similarity=0.348 Sum_probs=60.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCC----------CCeEEEEcCccccccccchhhHH
Q 023482 141 EGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASI----------DQLKVLQEDFVKCHIRSHMLSLF 209 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~~~~~----------~~v~~~~gD~~~~~~~d~~~d~v 209 (281)
++++||=||-|.|..+..+.+. ..+|+.||+|+..++.+++.+... ++++++.+|+.++--. ..
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~-----~~ 279 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKR-----YA 279 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHH-----HH
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHh-----hh
Confidence 5679999999999999999886 459999999999999999986431 2689999998764210 00
Q ss_pred HhhcCCCCccEEEEcC
Q 023482 210 ERRKSSSGFAKVVANI 225 (281)
Q Consensus 210 ~~~~~~~~~d~Vi~n~ 225 (281)
.....||+||.++
T Consensus 280 ---~~~~~yDvIIvDl 292 (381)
T 3c6k_A 280 ---KEGREFDYVINDL 292 (381)
T ss_dssp ---HHTCCEEEEEEEC
T ss_pred ---hccCceeEEEECC
Confidence 2346799999874
No 296
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=97.37 E-value=8.6e-05 Score=66.35 Aligned_cols=75 Identities=12% Similarity=0.166 Sum_probs=60.2
Q ss_pred cCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCC-CeEEEEcCcccc
Q 023482 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKC 199 (281)
Q Consensus 124 ~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~-~v~~~~gD~~~~ 199 (281)
..+..+++.+++... .+++.|||..||+|..+.+....+.+.+|+|+++..++.+++++...+ ....++.|+.++
T Consensus 236 ~kp~~l~~~~i~~~~-~~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~~~~~~r~~~~~~~~~~~~~~~~~i 311 (323)
T 1boo_A 236 RFPAKLPEFFIRMLT-EPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFRFLDNNISEEKITDIYNRI 311 (323)
T ss_dssp CCCTHHHHHHHHHHC-CTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHGGGSCSCSCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHHHHHHHHHHhcccchHHHHHHHHHH
Confidence 345678888887654 578899999999999999988889999999999999999999987553 344455555444
No 297
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=97.33 E-value=0.00068 Score=59.77 Aligned_cols=79 Identities=18% Similarity=0.106 Sum_probs=61.9
Q ss_pred CCCEEEEEcCCccHHHHHHHHcCCE---EEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 141 EGDIVLEIGPGTGSLTNVLLNAGAT---VLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~la~~~~~---v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
...+++|+.||.|.++..+.+.|.+ |.++|+++.+.+..+.|+. +..++.+|+.++...+ + ...+.
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~---~~~~~~~DI~~i~~~~----i----~~~~~ 83 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQ---GKIMYVGDVRSVTQKH----I----QEWGP 83 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTT---TCEEEECCGGGCCHHH----H----HHTCC
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCC---CCceeCCChHHccHHH----h----cccCC
Confidence 4458999999999999999988764 5999999999998888865 4568899999876432 1 12256
Q ss_pred ccEEEEcCCCccc
Q 023482 218 FAKVVANIPFNIS 230 (281)
Q Consensus 218 ~d~Vi~n~P~~~~ 230 (281)
+|++++.+|-+-.
T Consensus 84 ~Dll~ggpPCQ~f 96 (295)
T 2qrv_A 84 FDLVIGGSPCNDL 96 (295)
T ss_dssp CSEEEECCCCGGG
T ss_pred cCEEEecCCCccc
Confidence 8999999986543
No 298
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.31 E-value=0.0007 Score=59.28 Aligned_cols=78 Identities=17% Similarity=0.105 Sum_probs=57.1
Q ss_pred CCCCEEEEEcCCccHHHHHHHHc-------CCEEEEEeCCHH--------------------------HHHHHHHHhcCC
Q 023482 140 QEGDIVLEIGPGTGSLTNVLLNA-------GATVLAIEKDQH--------------------------MVGLVRERFASI 186 (281)
Q Consensus 140 ~~~~~VLDiGcG~G~~t~~la~~-------~~~v~gvD~s~~--------------------------~l~~a~~~~~~~ 186 (281)
..+..|||+|+..|++++.|+.. +.+|+++|..+. .++.+++++++.
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 34569999999999999998753 568999996421 467788887754
Q ss_pred ----CCeEEEEcCccccccccchhhHHHhhcCCCCccEEEEcCCC
Q 023482 187 ----DQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPF 227 (281)
Q Consensus 187 ----~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~ 227 (281)
++|+++.||+.+.-.. ...+.+|+|+.+.-.
T Consensus 185 gl~~~~I~li~Gda~etL~~----------~~~~~~d~vfIDaD~ 219 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPT----------APIDTLAVLRMDGDL 219 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTT----------CCCCCEEEEEECCCS
T ss_pred CCCcCceEEEEeCHHHHHhh----------CCCCCEEEEEEcCCc
Confidence 4899999999764211 223578999987643
No 299
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.23 E-value=0.00014 Score=63.31 Aligned_cols=86 Identities=13% Similarity=0.092 Sum_probs=52.8
Q ss_pred HHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc-C-CEEEEEeCCHHHHHHHHHHhcCCC-CeEEEEcCccccccccchh
Q 023482 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-G-ATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHIRSHML 206 (281)
Q Consensus 130 ~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~-~-~~v~gvD~s~~~l~~a~~~~~~~~-~v~~~~gD~~~~~~~d~~~ 206 (281)
+..+.+...+.++.+|||+|||+|.++..++.. + ..|+|+|+...+...+... ...+ ++..+..++....
T Consensus 79 L~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~g~~ii~~~~~~dv~~------ 151 (282)
T 3gcz_A 79 LRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTLGWNLIRFKDKTDVFN------ 151 (282)
T ss_dssp HHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBTTGGGEEEECSCCGGG------
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccCCCceEEeeCCcchhh------
Confidence 444455555667889999999999999988865 4 3799999986542222110 0011 3333333322111
Q ss_pred hHHHhhcCCCCccEEEEcCCCc
Q 023482 207 SLFERRKSSSGFAKVVANIPFN 228 (281)
Q Consensus 207 d~v~~~~~~~~~d~Vi~n~P~~ 228 (281)
.....+|+|+++...+
T Consensus 152 ------l~~~~~DvVLSDmApn 167 (282)
T 3gcz_A 152 ------MEVIPGDTLLCDIGES 167 (282)
T ss_dssp ------SCCCCCSEEEECCCCC
T ss_pred ------cCCCCcCEEEecCccC
Confidence 2346899999986554
No 300
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=97.21 E-value=0.00053 Score=61.37 Aligned_cols=75 Identities=13% Similarity=0.151 Sum_probs=58.6
Q ss_pred CCEEEEEcCCccHHHHHHHHcCC---EE-EEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 142 GDIVLEIGPGTGSLTNVLLNAGA---TV-LAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 142 ~~~VLDiGcG~G~~t~~la~~~~---~v-~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
.-+++|+.||.|.++..+...|. .| .++|+++.+.+..+.|+... ++++|+.++...+ + ....
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~----~~~~DI~~~~~~~-----i----~~~~ 76 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE----VQVKNLDSISIKQ-----I----ESLN 76 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC----CBCCCTTTCCHHH-----H----HHTC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC----cccCChhhcCHHH-----h----ccCC
Confidence 34899999999999999998873 45 69999999999999998642 6789998876432 1 1136
Q ss_pred ccEEEEcCCCcc
Q 023482 218 FAKVVANIPFNI 229 (281)
Q Consensus 218 ~d~Vi~n~P~~~ 229 (281)
+|++++.+|=+.
T Consensus 77 ~Dil~ggpPCQ~ 88 (327)
T 3qv2_A 77 CNTWFMSPPCQP 88 (327)
T ss_dssp CCEEEECCCCTT
T ss_pred CCEEEecCCccC
Confidence 899999998443
No 301
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=97.17 E-value=0.00054 Score=61.44 Aligned_cols=73 Identities=14% Similarity=0.254 Sum_probs=57.9
Q ss_pred CEEEEEcCCccHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCCcc
Q 023482 143 DIVLEIGPGTGSLTNVLLNAGA---TVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFA 219 (281)
Q Consensus 143 ~~VLDiGcG~G~~t~~la~~~~---~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d 219 (281)
-+++|+.||.|.+...+...|. .|.++|+++.+.+..+.|+. ...++++|+.++...+ .....+|
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~---~~~~~~~DI~~~~~~~---------~~~~~~D 71 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP---ETNLLNRNIQQLTPQV---------IKKWNVD 71 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT---TSCEECCCGGGCCHHH---------HHHTTCC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC---CCceeccccccCCHHH---------hccCCCC
Confidence 3799999999999999988874 47899999999999998886 4457889998876432 1113589
Q ss_pred EEEEcCCC
Q 023482 220 KVVANIPF 227 (281)
Q Consensus 220 ~Vi~n~P~ 227 (281)
++++.+|=
T Consensus 72 ~l~ggpPC 79 (333)
T 4h0n_A 72 TILMSPPC 79 (333)
T ss_dssp EEEECCCC
T ss_pred EEEecCCC
Confidence 99998874
No 302
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=97.15 E-value=0.0012 Score=58.74 Aligned_cols=69 Identities=17% Similarity=0.204 Sum_probs=57.2
Q ss_pred EEEEEcCCccHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCCccEEE
Q 023482 144 IVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVV 222 (281)
Q Consensus 144 ~VLDiGcG~G~~t~~la~~~~-~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi 222 (281)
+|+|+.||.|.+...+.+.|. -+.++|+++.+.+.-+.|+. -+++++|+.++...+ ....|+++
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~----~~~~~~DI~~i~~~~-----------~~~~D~l~ 66 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHS----AKLIKGDISKISSDE-----------FPKCDGII 66 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCC----SEEEESCGGGCCGGG-----------SCCCSEEE
T ss_pred eEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCC----CCcccCChhhCCHhh-----------CCcccEEE
Confidence 699999999999999988887 46799999999999888875 268899999886432 25689999
Q ss_pred EcCCC
Q 023482 223 ANIPF 227 (281)
Q Consensus 223 ~n~P~ 227 (281)
+.||=
T Consensus 67 ggpPC 71 (331)
T 3ubt_Y 67 GGPPS 71 (331)
T ss_dssp CCCCG
T ss_pred ecCCC
Confidence 98873
No 303
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.15 E-value=0.0003 Score=59.61 Aligned_cols=82 Identities=12% Similarity=0.097 Sum_probs=57.9
Q ss_pred HHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHhcC--CCCeEEEEc-Cccccccccc
Q 023482 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-GA-TVLAIEKDQHMVGLVRERFAS--IDQLKVLQE-DFVKCHIRSH 204 (281)
Q Consensus 130 ~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~-~~-~v~gvD~s~~~l~~a~~~~~~--~~~v~~~~g-D~~~~~~~d~ 204 (281)
+..+.+...+.++.+|+|+||++|..+...+.. ++ +|+|+|+-..-.+.=+ .... .+.|+|..+ |+..++
T Consensus 67 L~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~-~~~s~gwn~v~fk~gvDv~~~~---- 141 (267)
T 3p8z_A 67 LQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPV-PMSTYGWNIVKLMSGKDVFYLP---- 141 (267)
T ss_dssp HHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCC-CCCCTTTTSEEEECSCCGGGCC----
T ss_pred HHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcc-hhhhcCcCceEEEeccceeecC----
Confidence 455555566778889999999999999988876 44 8999999754431000 0011 237899999 987654
Q ss_pred hhhHHHhhcCCCCccEEEEcCC
Q 023482 205 MLSLFERRKSSSGFAKVVANIP 226 (281)
Q Consensus 205 ~~d~v~~~~~~~~~d~Vi~n~P 226 (281)
...+|.|+++.-
T Consensus 142 ----------~~~~DtllcDIg 153 (267)
T 3p8z_A 142 ----------PEKCDTLLCDIG 153 (267)
T ss_dssp ----------CCCCSEEEECCC
T ss_pred ----------CccccEEEEecC
Confidence 256899999853
No 304
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=97.06 E-value=0.0013 Score=58.68 Aligned_cols=63 Identities=14% Similarity=0.200 Sum_probs=53.0
Q ss_pred cCCHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHhcCCC
Q 023482 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQ---HMVGLVRERFASID 187 (281)
Q Consensus 124 ~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~~~~v~gvD~s~---~~l~~a~~~~~~~~ 187 (281)
..+..+++.+++... .+++.|||..||+|..+.+....+.+.+|+|+++ ..++.+++++...+
T Consensus 226 ~kp~~l~~~~i~~~~-~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 226 QKPAAVIERLVRALS-HPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp CCCHHHHHHHHHHHS-CTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCHHHHHHHHHHhC-CCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 466788999988764 5788999999999999999988899999999999 99999999987544
No 305
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.99 E-value=0.0015 Score=57.06 Aligned_cols=82 Identities=12% Similarity=0.062 Sum_probs=55.8
Q ss_pred HHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHhcCC--CCeEEEEc-Cccccccccc
Q 023482 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-GA-TVLAIEKDQHMVGLVRERFASI--DQLKVLQE-DFVKCHIRSH 204 (281)
Q Consensus 130 ~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~-~~-~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~g-D~~~~~~~d~ 204 (281)
+..+.+...+.++..|||+||++|.++..++.. ++ +|+|+|+-..-.+.=+ ..... .-|++..+ |+..++.
T Consensus 83 L~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~-~~~ql~w~lV~~~~~~Dv~~l~~--- 158 (321)
T 3lkz_A 83 LRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQ-LVQSYGWNIVTMKSGVDVFYRPS--- 158 (321)
T ss_dssp HHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCC-CCCBTTGGGEEEECSCCTTSSCC---
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcc-hhhhcCCcceEEEeccCHhhCCC---
Confidence 455556666778889999999999999988776 44 7999999755221000 00011 14788888 8876642
Q ss_pred hhhHHHhhcCCCCccEEEEcCC
Q 023482 205 MLSLFERRKSSSGFAKVVANIP 226 (281)
Q Consensus 205 ~~d~v~~~~~~~~~d~Vi~n~P 226 (281)
..+|.|+++.-
T Consensus 159 -----------~~~D~ivcDig 169 (321)
T 3lkz_A 159 -----------ECCDTLLCDIG 169 (321)
T ss_dssp -----------CCCSEEEECCC
T ss_pred -----------CCCCEEEEECc
Confidence 45899998765
No 306
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.72 E-value=0.0026 Score=58.53 Aligned_cols=59 Identities=15% Similarity=0.221 Sum_probs=48.3
Q ss_pred CCCCCEEEEEcCCccHHHHHHH-Hc-C--CEEEEEeCCHHHHHHHHHHhcC-----C-CCeEEEEcCcc
Q 023482 139 VQEGDIVLEIGPGTGSLTNVLL-NA-G--ATVLAIEKDQHMVGLVRERFAS-----I-DQLKVLQEDFV 197 (281)
Q Consensus 139 ~~~~~~VLDiGcG~G~~t~~la-~~-~--~~v~gvD~s~~~l~~a~~~~~~-----~-~~v~~~~gD~~ 197 (281)
+.+++.|+|||++.|..+..++ .. + ++|+++|.+|...+.+++++.. . .++++++.-+.
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~ 292 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAG 292 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEEC
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEE
Confidence 4578899999999999999988 43 2 6999999999999999998875 2 57777765443
No 307
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=96.63 E-value=0.0029 Score=59.46 Aligned_cols=84 Identities=13% Similarity=0.177 Sum_probs=61.7
Q ss_pred CEEEEEcCCccHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccc-------hhhHHHhhcC
Q 023482 143 DIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSH-------MLSLFERRKS 214 (281)
Q Consensus 143 ~~VLDiGcG~G~~t~~la~~~~-~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~-------~~d~v~~~~~ 214 (281)
-+++|+.||.|.++..+...|. .|.++|+++.+.+..+.|+...++..++++|+.++...+. .+..+. ..
T Consensus 89 ~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~--~~ 166 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAAAEHIR--QH 166 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTTSCHHHHHHHHH--HH
T ss_pred ceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhhhhccccccchhhHHhhhh--hc
Confidence 4899999999999999988876 4899999999999999888544456688899988753211 001110 12
Q ss_pred CCCccEEEEcCCCc
Q 023482 215 SSGFAKVVANIPFN 228 (281)
Q Consensus 215 ~~~~d~Vi~n~P~~ 228 (281)
.+.+|+|++.||=+
T Consensus 167 ~~~~Dvl~gGpPCQ 180 (482)
T 3me5_A 167 IPEHDVLLAGFPCQ 180 (482)
T ss_dssp SCCCSEEEEECCCC
T ss_pred CCCCCEEEecCCCc
Confidence 25689999988743
No 308
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=96.43 E-value=0.0035 Score=54.80 Aligned_cols=43 Identities=16% Similarity=0.142 Sum_probs=32.8
Q ss_pred HHHHHhcCCCCCEEEEEcCCccHHHHHHHHc-C-CEEEEEeCCHH
Q 023482 132 QLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-G-ATVLAIEKDQH 174 (281)
Q Consensus 132 ~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~-~-~~v~gvD~s~~ 174 (281)
.+.+.--+.++.+|||+||++|.++..+++. + ..|+|+|+...
T Consensus 72 ei~ek~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~ 116 (300)
T 3eld_A 72 WLHERGYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIE 116 (300)
T ss_dssp HHHHHTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCT
T ss_pred HHHHhCCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccc
Confidence 3334422347789999999999999999986 4 38999999754
No 309
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=95.93 E-value=0.0063 Score=52.16 Aligned_cols=80 Identities=15% Similarity=0.012 Sum_probs=48.7
Q ss_pred HHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCC-CCe---EEEEc-Cccccccc
Q 023482 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI-DQL---KVLQE-DFVKCHIR 202 (281)
Q Consensus 130 ~~~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~-~~v---~~~~g-D~~~~~~~ 202 (281)
+..|.+.--++++.+|+|+||+.|..+..+++. ...|.|.++.... . .. -.... .++ +|..+ |+.+++
T Consensus 62 L~EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-~~-P~~~~~~Gv~~i~~~~G~Df~~~~-- 136 (269)
T 2px2_A 62 LRWLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-EE-PMLMQSYGWNIVTMKSGVDVFYKP-- 136 (269)
T ss_dssp HHHHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-CC-CCCCCSTTGGGEEEECSCCGGGSC--
T ss_pred HHHHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-cC-CCcccCCCceEEEeeccCCccCCC--
Confidence 334444444568899999999999999999987 2244454443321 0 00 00000 133 55557 998743
Q ss_pred cchhhHHHhhcCCCCccEEEEcCC
Q 023482 203 SHMLSLFERRKSSSGFAKVVANIP 226 (281)
Q Consensus 203 d~~~d~v~~~~~~~~~d~Vi~n~P 226 (281)
+..+|+|+++..
T Consensus 137 ------------~~~~DvVLSDMA 148 (269)
T 2px2_A 137 ------------SEISDTLLCDIG 148 (269)
T ss_dssp ------------CCCCSEEEECCC
T ss_pred ------------CCCCCEEEeCCC
Confidence 257899999853
No 310
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=95.57 E-value=0.041 Score=47.15 Aligned_cols=83 Identities=13% Similarity=0.194 Sum_probs=61.6
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
+++.+|=-|.+.|. ++..+++.|++|+.+|.+++.++.+.+.+... +++.++.+|+.+..--+..++.+. ...+
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~--~~~G 83 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTF--ETYS 83 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH--HHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH--HHcC
Confidence 57888888987775 45556667999999999999998887777654 489999999988654444444332 3347
Q ss_pred CccEEEEcC
Q 023482 217 GFAKVVANI 225 (281)
Q Consensus 217 ~~d~Vi~n~ 225 (281)
..|++|.|-
T Consensus 84 ~iDiLVNNA 92 (254)
T 4fn4_A 84 RIDVLCNNA 92 (254)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 789999873
No 311
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=95.56 E-value=0.05 Score=49.34 Aligned_cols=21 Identities=14% Similarity=0.233 Sum_probs=17.8
Q ss_pred CCEEEEEcCCccHHHHHHHHc
Q 023482 142 GDIVLEIGPGTGSLTNVLLNA 162 (281)
Q Consensus 142 ~~~VLDiGcG~G~~t~~la~~ 162 (281)
+.+|+|+|||+|..|..+...
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ 73 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDF 73 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHH
T ss_pred ceEEEecCCCCChhHHHHHHH
Confidence 468999999999999988543
No 312
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=95.53 E-value=0.08 Score=48.15 Aligned_cols=81 Identities=6% Similarity=-0.142 Sum_probs=47.4
Q ss_pred CCEEEEEcCCccHHHHHHHHc-------------------CCEEEEEeCC-----------HHHHHHHHHHhcCCCCeEE
Q 023482 142 GDIVLEIGPGTGSLTNVLLNA-------------------GATVLAIEKD-----------QHMVGLVRERFASIDQLKV 191 (281)
Q Consensus 142 ~~~VLDiGcG~G~~t~~la~~-------------------~~~v~gvD~s-----------~~~l~~a~~~~~~~~~v~~ 191 (281)
.-+|+|+||++|..|..+... ..+|+.-|+- +.+.+.+++......+.-|
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 468999999999999888654 1256666654 4444443332221112344
Q ss_pred EEcCccccccccchhhHHHhhcCCCCccEEEEcCCCcccH
Q 023482 192 LQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNIST 231 (281)
Q Consensus 192 ~~gD~~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~ 231 (281)
+.|....+- +. +-+..++|+|++|..+||.+
T Consensus 133 ~~gvpgSFy------~r---lfp~~S~d~v~Ss~aLHWls 163 (384)
T 2efj_A 133 IGAMPGSFY------SR---LFPEESMHFLHSCYCLHWLS 163 (384)
T ss_dssp EEECCSCTT------SC---CSCTTCEEEEEEESCTTBCS
T ss_pred EEecchhhh------hc---cCCCCceEEEEecceeeecC
Confidence 444333211 00 02347899999998888854
No 313
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=95.50 E-value=0.1 Score=47.54 Aligned_cols=72 Identities=24% Similarity=0.271 Sum_probs=47.6
Q ss_pred ccccCCHHHH--------HHHHH---HhcCCCCCEEEEEcCCccHHHHHHHHc---------CCEEEEEeCCHHHHHHHH
Q 023482 121 QHYMLNSEIN--------DQLAA---AAAVQEGDIVLEIGPGTGSLTNVLLNA---------GATVLAIEKDQHMVGLVR 180 (281)
Q Consensus 121 ~~~~~~~~~~--------~~l~~---~l~~~~~~~VLDiGcG~G~~t~~la~~---------~~~v~gvD~s~~~l~~a~ 180 (281)
..|++.+++. .++++ .+....+-.|+|+|.|.|.++..+.+. ..+++.||+|+...+.-+
T Consensus 49 GDF~Tapeis~~FGe~la~~~~~~w~~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~ 128 (387)
T 1zkd_A 49 GDFTTSPEISQMFGELLGLWSASVWKAADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQ 128 (387)
T ss_dssp --CCSHHHHCHHHHHHHHHHHHHHHHHTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHH
T ss_pred CCeeCCCchHHHHHHHHHHHHHHHHHHcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHH
Confidence 3588887752 22222 222223347999999999998877642 238999999999988777
Q ss_pred HHhcCCCCeEEE
Q 023482 181 ERFASIDQLKVL 192 (281)
Q Consensus 181 ~~~~~~~~v~~~ 192 (281)
+++...++|++.
T Consensus 129 ~~L~~~~~v~W~ 140 (387)
T 1zkd_A 129 TLLAGIRNIHWH 140 (387)
T ss_dssp HHSTTCSSEEEE
T ss_pred HHhcCCCCeEEe
Confidence 777654456554
No 314
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=95.36 E-value=0.029 Score=57.07 Aligned_cols=81 Identities=20% Similarity=0.103 Sum_probs=56.5
Q ss_pred CEEEEEcCCccHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHH----hhcCCC
Q 023482 143 DIVLEIGPGTGSLTNVLLNAGA--TVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFE----RRKSSS 216 (281)
Q Consensus 143 ~~VLDiGcG~G~~t~~la~~~~--~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~----~~~~~~ 216 (281)
-+++|+.||.|.++..+.+.|. .+.++|+++.+.+..+.|+. +..++.+|+.++.-....-|+.. .+...+
T Consensus 541 l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p---~~~~~~~DI~~l~~~~~~~di~~~~~~~lp~~~ 617 (1002)
T 3swr_A 541 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNP---GSTVFTEDCNILLKLVMAGETTNSRGQRLPQKG 617 (1002)
T ss_dssp EEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCT---TSEEECSCHHHHHHHHHHTCSBCTTCCBCCCTT
T ss_pred CeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC---CCccccccHHHHhhhccchhhhhhhhhhcccCC
Confidence 3899999999999999988886 57799999999998888875 56778888755410000000000 001235
Q ss_pred CccEEEEcCC
Q 023482 217 GFAKVVANIP 226 (281)
Q Consensus 217 ~~d~Vi~n~P 226 (281)
.+|+|++.||
T Consensus 618 ~vDll~GGpP 627 (1002)
T 3swr_A 618 DVEMLCGGPP 627 (1002)
T ss_dssp TCSEEEECCC
T ss_pred CeeEEEEcCC
Confidence 6899999987
No 315
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=95.12 E-value=0.099 Score=44.47 Aligned_cols=83 Identities=14% Similarity=0.158 Sum_probs=59.2
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
.++++|=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+... .++.++.+|+.+..--+..++.+. ...+
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~--~~~g 87 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETM--KAYG 87 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH--HHTS
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH--HHcC
Confidence 56789999987664 45556667999999999998888777666543 489999999987643333333322 2346
Q ss_pred CccEEEEcC
Q 023482 217 GFAKVVANI 225 (281)
Q Consensus 217 ~~d~Vi~n~ 225 (281)
..|++|.|.
T Consensus 88 ~id~lv~nA 96 (264)
T 3ucx_A 88 RVDVVINNA 96 (264)
T ss_dssp CCSEEEECC
T ss_pred CCcEEEECC
Confidence 789999875
No 316
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.00 E-value=0.18 Score=44.92 Aligned_cols=105 Identities=17% Similarity=0.157 Sum_probs=64.0
Q ss_pred HHHhcCCCCCEEEEEcCCc-cHHHHHHHHc-CCE-EEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHH
Q 023482 134 AAAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GAT-VLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFE 210 (281)
Q Consensus 134 ~~~l~~~~~~~VLDiGcG~-G~~t~~la~~-~~~-v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~ 210 (281)
+....+.++++||=+|+|. |.++..+++. |++ |+++|.+++-++.+++. .. .-+.+ ..|..+ .+...+.+.
T Consensus 172 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~-~~~~~-~~~~~~---~~~~~~~v~ 245 (363)
T 3m6i_A 172 LQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CP-EVVTH-KVERLS---AEESAKKIV 245 (363)
T ss_dssp HHHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CT-TCEEE-ECCSCC---HHHHHHHHH
T ss_pred HHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-ch-hcccc-cccccc---hHHHHHHHH
Confidence 3566778899999999875 7777788876 776 99999999999999876 31 12222 111100 011111222
Q ss_pred hhcCCCCccEEEEcCCCcccHHHHHHhccCCCCc
Q 023482 211 RRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIF 244 (281)
Q Consensus 211 ~~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~ 244 (281)
....+..+|+||-...-........+++.+++.+
T Consensus 246 ~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~i 279 (363)
T 3m6i_A 246 ESFGGIEPAVALECTGVESSIAAAIWAVKFGGKV 279 (363)
T ss_dssp HHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEE
T ss_pred HHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEE
Confidence 1133457999998765432333444666666655
No 317
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.93 E-value=0.13 Score=37.44 Aligned_cols=85 Identities=15% Similarity=0.201 Sum_probs=58.3
Q ss_pred CCEEEEEcCCccHHHHHHHH----cC-CEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 142 GDIVLEIGPGTGSLTNVLLN----AG-ATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 142 ~~~VLDiGcG~G~~t~~la~----~~-~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
..+|+=+|+ |.++..++. .+ .+|+++|.+++.++.+. ...+.++.+|..+... ..+. ..
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-----~~~~~~~~~d~~~~~~---~~~~------~~ 68 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-----RMGVATKQVDAKDEAG---LAKA------LG 68 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-----TTTCEEEECCTTCHHH---HHHH------TT
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-----hCCCcEEEecCCCHHH---HHHH------Hc
Confidence 457999998 555555543 47 79999999998777665 1367788888765321 1111 14
Q ss_pred CccEEEEcCCCcccHHHHHHhccCCC
Q 023482 217 GFAKVVANIPFNISTDVIKQLLPMGD 242 (281)
Q Consensus 217 ~~d~Vi~n~P~~~~~~~~~~ll~~~~ 242 (281)
.+|+||...|+....++.....+.+.
T Consensus 69 ~~d~vi~~~~~~~~~~~~~~~~~~g~ 94 (118)
T 3ic5_A 69 GFDAVISAAPFFLTPIIAKAAKAAGA 94 (118)
T ss_dssp TCSEEEECSCGGGHHHHHHHHHHTTC
T ss_pred CCCEEEECCCchhhHHHHHHHHHhCC
Confidence 68999999998887777777766553
No 318
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=94.91 E-value=0.088 Score=44.61 Aligned_cols=83 Identities=13% Similarity=0.223 Sum_probs=57.8
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCC-CeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~-~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
.++++|=.|.+.|. ++..|++.|++|+.++.+++.++.+...+...+ ++.++.+|+.+..--+..++.+. ...+
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~--~~~g 82 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQID--EKFG 82 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHH--HHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH--HHcC
Confidence 46788888866553 344555568999999999999888887776543 89999999987543333333322 2235
Q ss_pred CccEEEEcC
Q 023482 217 GFAKVVANI 225 (281)
Q Consensus 217 ~~d~Vi~n~ 225 (281)
..|++|.|.
T Consensus 83 ~id~lv~nA 91 (257)
T 3imf_A 83 RIDILINNA 91 (257)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 789999874
No 319
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=94.87 E-value=0.059 Score=46.20 Aligned_cols=83 Identities=14% Similarity=0.133 Sum_probs=60.6
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
.++++|=-|.+.|. ++..+++.|++|+..|++++.++.+.+.+... .++..+.+|+.+...-+..++.+. ...+
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~--~~~G 85 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLD--AEGI 85 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHH--HTTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH--HHCC
Confidence 57888888877665 45556667999999999999888877666544 488999999887544333444432 4557
Q ss_pred CccEEEEcC
Q 023482 217 GFAKVVANI 225 (281)
Q Consensus 217 ~~d~Vi~n~ 225 (281)
..|++|.|-
T Consensus 86 ~iDiLVNNA 94 (255)
T 4g81_D 86 HVDILINNA 94 (255)
T ss_dssp CCCEEEECC
T ss_pred CCcEEEECC
Confidence 899999874
No 320
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.83 E-value=0.098 Score=46.91 Aligned_cols=99 Identities=13% Similarity=0.110 Sum_probs=60.5
Q ss_pred HHhcCCCCCEEEEEcCCc-cHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHh
Q 023482 135 AAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GA-TVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFER 211 (281)
Q Consensus 135 ~~l~~~~~~~VLDiGcG~-G~~t~~la~~-~~-~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~ 211 (281)
....+.++++||-+|+|. |.++..+++. |+ +|+++|.+++.++.+++.-. -.++..+ +.++ .+.+..
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa----~~vi~~~--~~~~----~~~~~~ 253 (371)
T 1f8f_A 184 NALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA----THVINSK--TQDP----VAAIKE 253 (371)
T ss_dssp TTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTC----SEEEETT--TSCH----HHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC----CEEecCC--ccCH----HHHHHH
Confidence 455677899999999986 7888888876 77 79999999999998875421 1223221 1111 111211
Q ss_pred hcCCCCccEEEEcCCCcccHHHHHHhccCCCCc
Q 023482 212 RKSSSGFAKVVANIPFNISTDVIKQLLPMGDIF 244 (281)
Q Consensus 212 ~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~ 244 (281)
...+.+|+||-...-........+++++++.+
T Consensus 254 -~~~gg~D~vid~~g~~~~~~~~~~~l~~~G~i 285 (371)
T 1f8f_A 254 -ITDGGVNFALESTGSPEILKQGVDALGILGKI 285 (371)
T ss_dssp -HTTSCEEEEEECSCCHHHHHHHHHTEEEEEEE
T ss_pred -hcCCCCcEEEECCCCHHHHHHHHHHHhcCCEE
Confidence 12237899988765432233334555555443
No 321
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=94.80 E-value=0.15 Score=45.31 Aligned_cols=102 Identities=22% Similarity=0.245 Sum_probs=63.5
Q ss_pred HHHHhcCCCCCEEEEEcCCc-cHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHH
Q 023482 133 LAAAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GA-TVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLF 209 (281)
Q Consensus 133 l~~~l~~~~~~~VLDiGcG~-G~~t~~la~~-~~-~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v 209 (281)
.+....+.++++||-+|+|. |.++..+++. |+ +|+++|.+++.++.+++.-. -.++ |..+.++ .+.+
T Consensus 158 al~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa----~~vi--~~~~~~~----~~~v 227 (352)
T 3fpc_A 158 GAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGA----TDII--NYKNGDI----VEQI 227 (352)
T ss_dssp HHHHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTC----CEEE--CGGGSCH----HHHH
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCC----ceEE--cCCCcCH----HHHH
Confidence 34667788999999999875 7778888876 77 89999999999988876422 1222 2211111 1122
Q ss_pred HhhcCCCCccEEEEcCCCcccHHHHHHhccCCCCc
Q 023482 210 ERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIF 244 (281)
Q Consensus 210 ~~~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~ 244 (281)
........+|+||-...-........+++.+++.+
T Consensus 228 ~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~ 262 (352)
T 3fpc_A 228 LKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDI 262 (352)
T ss_dssp HHHTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEE
T ss_pred HHHcCCCCCCEEEECCCChHHHHHHHHHHhcCCEE
Confidence 21133446999998665433334444555555544
No 322
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=94.71 E-value=0.14 Score=42.82 Aligned_cols=83 Identities=14% Similarity=0.176 Sum_probs=57.1
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
.++++|=.|++.|. ++..|++.|++|+.++.+++..+.+...+... .++.++.+|+.+...-+..++.+. ...+
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~--~~~~ 81 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIK--AENL 81 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH--HTTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH--HHcC
Confidence 45788888865543 44455556899999999998888776666544 389999999987543333333332 3346
Q ss_pred CccEEEEcC
Q 023482 217 GFAKVVANI 225 (281)
Q Consensus 217 ~~d~Vi~n~ 225 (281)
..|++|.|.
T Consensus 82 ~id~li~~A 90 (247)
T 3lyl_A 82 AIDILVNNA 90 (247)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEECC
Confidence 789999874
No 323
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=94.66 E-value=0.087 Score=44.74 Aligned_cols=84 Identities=14% Similarity=0.176 Sum_probs=56.7
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
.+++||=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+... .++.++.+|+.+..-....++.+. ...+
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~--~~~g 105 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVL--AAHG 105 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH--HHHS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHH--HhcC
Confidence 56789988876542 33444556899999999998888777666543 478999999987543333333221 2235
Q ss_pred CccEEEEcCC
Q 023482 217 GFAKVVANIP 226 (281)
Q Consensus 217 ~~d~Vi~n~P 226 (281)
..|++|.|.-
T Consensus 106 ~id~lv~~Ag 115 (262)
T 3rkr_A 106 RCDVLVNNAG 115 (262)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 7899998743
No 324
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=94.66 E-value=0.093 Score=44.10 Aligned_cols=84 Identities=17% Similarity=0.185 Sum_probs=57.8
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
.+++||=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+... +++.++.+|+.+...-...++.+. ...+
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~--~~~g 85 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTL--AEFG 85 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH--HHHS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH--HHcC
Confidence 46789988976553 44555556899999999999888777666543 478899999987643333333322 2235
Q ss_pred CccEEEEcCC
Q 023482 217 GFAKVVANIP 226 (281)
Q Consensus 217 ~~d~Vi~n~P 226 (281)
..|++|.|.-
T Consensus 86 ~id~li~~Ag 95 (253)
T 3qiv_A 86 GIDYLVNNAA 95 (253)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7899998853
No 325
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=94.65 E-value=0.13 Score=43.60 Aligned_cols=83 Identities=19% Similarity=0.317 Sum_probs=58.1
Q ss_pred CCCEEEEEcC-CccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEcCccccccccchhhHHHhhcC
Q 023482 141 EGDIVLEIGP-GTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (281)
Q Consensus 141 ~~~~VLDiGc-G~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~gD~~~~~~~d~~~d~v~~~~~ 214 (281)
.+++||=.|. |.|. ++..+++.|++|+.++.+++.++.+.+.+... .++.++.+|+.+...-+..++.+. ..
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~--~~ 98 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTV--EK 98 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHH--HH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHH--HH
Confidence 5678998887 5443 55566677999999999999888877776543 389999999987543333333322 22
Q ss_pred CCCccEEEEcC
Q 023482 215 SSGFAKVVANI 225 (281)
Q Consensus 215 ~~~~d~Vi~n~ 225 (281)
.+..|++|.|.
T Consensus 99 ~g~id~li~~A 109 (266)
T 3o38_A 99 AGRLDVLVNNA 109 (266)
T ss_dssp HSCCCEEEECC
T ss_pred hCCCcEEEECC
Confidence 35789999874
No 326
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.64 E-value=0.36 Score=42.79 Aligned_cols=101 Identities=20% Similarity=0.134 Sum_probs=61.4
Q ss_pred HHhcCCCCCEEEEEcCCc-cHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhh
Q 023482 135 AAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERR 212 (281)
Q Consensus 135 ~~l~~~~~~~VLDiGcG~-G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~ 212 (281)
....+.++++||-+|+|. |.++..+++. |++|+++|.+++.++.+++.-. . .++..+- .-++ .+.+...
T Consensus 162 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa---~-~~~~~~~-~~~~----~~~i~~~ 232 (352)
T 1e3j_A 162 RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGA---D-VTLVVDP-AKEE----ESSIIER 232 (352)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTC---S-EEEECCT-TTSC----HHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCC---C-EEEcCcc-cccH----HHHHHHH
Confidence 456778899999999874 7777777775 8899999999999988875321 1 2222110 0111 1111110
Q ss_pred cC---CCCccEEEEcCCCcccHHHHHHhccCCCCc
Q 023482 213 KS---SSGFAKVVANIPFNISTDVIKQLLPMGDIF 244 (281)
Q Consensus 213 ~~---~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~ 244 (281)
.. ...+|+||-+...........+++.+++.+
T Consensus 233 ~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~i 267 (352)
T 1e3j_A 233 IRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTL 267 (352)
T ss_dssp HHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEE
T ss_pred hccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEE
Confidence 11 356899998776443333344566666654
No 327
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=94.62 E-value=0.081 Score=44.79 Aligned_cols=82 Identities=13% Similarity=0.144 Sum_probs=58.1
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
.++++|=.|++.|. ++..+++.|++|+.++.+++.++.+.+.+... +++.++.+|+.+..--+..++.+. .. +
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~--~~-g 82 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAAD--AH-A 82 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH--HH-S
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHH--hh-C
Confidence 46788988877664 44555566899999999988887777666543 488999999987654333344332 23 6
Q ss_pred CccEEEEcC
Q 023482 217 GFAKVVANI 225 (281)
Q Consensus 217 ~~d~Vi~n~ 225 (281)
..|++|.|.
T Consensus 83 ~id~lv~nA 91 (252)
T 3h7a_A 83 PLEVTIFNV 91 (252)
T ss_dssp CEEEEEECC
T ss_pred CceEEEECC
Confidence 789999874
No 328
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=94.58 E-value=0.15 Score=44.02 Aligned_cols=83 Identities=22% Similarity=0.193 Sum_probs=58.0
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
.++++|=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+... +++.++.+|+.+..--+..++.+. ...+
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~--~~~g 104 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLV--LKFG 104 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHH--HHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH--HHhC
Confidence 56789988876654 44455566899999999999888877776554 489999999987543333333322 2235
Q ss_pred CccEEEEcC
Q 023482 217 GFAKVVANI 225 (281)
Q Consensus 217 ~~d~Vi~n~ 225 (281)
..|++|.|.
T Consensus 105 ~iD~lVnnA 113 (283)
T 3v8b_A 105 HLDIVVANA 113 (283)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 789999874
No 329
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.57 E-value=0.15 Score=45.26 Aligned_cols=92 Identities=21% Similarity=0.213 Sum_probs=59.4
Q ss_pred HHHHhcCCCCCEEEEEcCCc-cHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHH
Q 023482 133 LAAAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFE 210 (281)
Q Consensus 133 l~~~l~~~~~~~VLDiGcG~-G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~ 210 (281)
.+....+.++++||-+|+|. |.++..+++. |++|+++|.+++-++.+++. . --.++ .|...+
T Consensus 168 ~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l-G---a~~v~-~~~~~~----------- 231 (348)
T 3two_A 168 PLKFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSM-G---VKHFY-TDPKQC----------- 231 (348)
T ss_dssp HHHHTTCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHT-T---CSEEE-SSGGGC-----------
T ss_pred HHHhcCCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhc-C---CCeec-CCHHHH-----------
Confidence 34455778899999999875 7777777776 88999999999999888763 2 11233 332221
Q ss_pred hhcCCCCccEEEEcCCCcccHHHHHHhccCCCCc
Q 023482 211 RRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIF 244 (281)
Q Consensus 211 ~~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~ 244 (281)
. ..+|+||-...-........+++++++.+
T Consensus 232 --~--~~~D~vid~~g~~~~~~~~~~~l~~~G~i 261 (348)
T 3two_A 232 --K--EELDFIISTIPTHYDLKDYLKLLTYNGDL 261 (348)
T ss_dssp --C--SCEEEEEECCCSCCCHHHHHTTEEEEEEE
T ss_pred --h--cCCCEEEECCCcHHHHHHHHHHHhcCCEE
Confidence 1 26888887655442333444555555543
No 330
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=94.53 E-value=0.069 Score=48.92 Aligned_cols=43 Identities=19% Similarity=-0.038 Sum_probs=37.0
Q ss_pred CEEEEEcCCccHHHHHHHHcCC---E----EEEEeCCHHHHHHHHHHhcC
Q 023482 143 DIVLEIGPGTGSLTNVLLNAGA---T----VLAIEKDQHMVGLVRERFAS 185 (281)
Q Consensus 143 ~~VLDiGcG~G~~t~~la~~~~---~----v~gvD~s~~~l~~a~~~~~~ 185 (281)
-+|+|+.||.|.+...+.+.|. - |.++|+++.++..-+.++..
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 3899999999999999987752 3 88899999999988888864
No 331
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=94.52 E-value=0.11 Score=45.11 Aligned_cols=83 Identities=13% Similarity=0.093 Sum_probs=58.0
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
.+++||=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+... .++.++.+|+.+..-.+..++.+. ...+
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~--~~~g 107 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAF--RLLG 107 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH--HHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHH--HhCC
Confidence 57789999987653 44555556899999999999888877766543 489999999987543332333221 1225
Q ss_pred CccEEEEcC
Q 023482 217 GFAKVVANI 225 (281)
Q Consensus 217 ~~d~Vi~n~ 225 (281)
..|++|.|.
T Consensus 108 ~id~lvnnA 116 (301)
T 3tjr_A 108 GVDVVFSNA 116 (301)
T ss_dssp SCSEEEECC
T ss_pred CCCEEEECC
Confidence 789999874
No 332
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=94.51 E-value=0.14 Score=44.04 Aligned_cols=83 Identities=11% Similarity=0.108 Sum_probs=56.7
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
.++++|=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+... .++.++.+|+.+..--...++.+. ...+
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~--~~~g 100 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAV--ERFG 100 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH--HHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH--HHcC
Confidence 46789999976553 44555566999999999999888777766554 489999999987543332333221 2235
Q ss_pred CccEEEEcC
Q 023482 217 GFAKVVANI 225 (281)
Q Consensus 217 ~~d~Vi~n~ 225 (281)
..|++|.|.
T Consensus 101 ~id~lv~nA 109 (279)
T 3sju_A 101 PIGILVNSA 109 (279)
T ss_dssp SCCEEEECC
T ss_pred CCcEEEECC
Confidence 789999874
No 333
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=94.44 E-value=0.11 Score=43.99 Aligned_cols=83 Identities=13% Similarity=0.171 Sum_probs=57.1
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
.++++|=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+... .++.++.+|+.+....+..++.+. ...+
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~--~~~g 88 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAAL--DQFG 88 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH--HHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH--HHcC
Confidence 46788888876654 44455556999999999998887776666543 489999999987543333333222 2235
Q ss_pred CccEEEEcC
Q 023482 217 GFAKVVANI 225 (281)
Q Consensus 217 ~~d~Vi~n~ 225 (281)
..|++|.|.
T Consensus 89 ~id~lv~nA 97 (256)
T 3gaf_A 89 KITVLVNNA 97 (256)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 789999874
No 334
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.31 E-value=0.35 Score=42.99 Aligned_cols=102 Identities=20% Similarity=0.128 Sum_probs=62.3
Q ss_pred HHhcCCCCCEEEEEcCCc-cHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHh
Q 023482 135 AAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GA-TVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFER 211 (281)
Q Consensus 135 ~~l~~~~~~~VLDiGcG~-G~~t~~la~~-~~-~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~ 211 (281)
....+.++++||-+|+|. |.++..+++. |+ +|+++|.+++-++.+++.-. . .++..+-.+ . ....+.+..
T Consensus 165 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa---~-~vi~~~~~~--~-~~~~~~i~~ 237 (356)
T 1pl8_A 165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGA---D-LVLQISKES--P-QEIARKVEG 237 (356)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC---S-EEEECSSCC--H-HHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC---C-EEEcCcccc--c-chHHHHHHH
Confidence 456778899999999885 7788888875 77 99999999999888875321 1 233221000 0 011111211
Q ss_pred hcCCCCccEEEEcCCCcccHHHHHHhccCCCCc
Q 023482 212 RKSSSGFAKVVANIPFNISTDVIKQLLPMGDIF 244 (281)
Q Consensus 212 ~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~ 244 (281)
... ..+|+||-...-........+++.+++.+
T Consensus 238 ~~~-~g~D~vid~~g~~~~~~~~~~~l~~~G~i 269 (356)
T 1pl8_A 238 QLG-CKPEVTIECTGAEASIQAGIYATRSGGTL 269 (356)
T ss_dssp HHT-SCCSEEEECSCCHHHHHHHHHHSCTTCEE
T ss_pred HhC-CCCCEEEECCCChHHHHHHHHHhcCCCEE
Confidence 122 56899998776433333444666666654
No 335
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=94.27 E-value=0.16 Score=43.93 Aligned_cols=81 Identities=11% Similarity=0.159 Sum_probs=59.8
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
+++++|=-|.+.|. .+..|++.|++|+.+|.+++.++.+.+.+. +++..+.+|+.+..-.+..++.+. ...+.
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~--~~~G~ 103 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIG--GGAVGIQADSANLAELDRLYEKVK--AEAGR 103 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--TTCEEEECCTTCHHHHHHHHHHHH--HHHSC
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC--CCeEEEEecCCCHHHHHHHHHHHH--HHcCC
Confidence 57889988987775 555566679999999999999888776664 478889999987654444444432 33477
Q ss_pred ccEEEEcC
Q 023482 218 FAKVVANI 225 (281)
Q Consensus 218 ~d~Vi~n~ 225 (281)
.|++|.|-
T Consensus 104 iDiLVNNA 111 (273)
T 4fgs_A 104 IDVLFVNA 111 (273)
T ss_dssp EEEEEECC
T ss_pred CCEEEECC
Confidence 89999873
No 336
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=94.16 E-value=0.17 Score=43.56 Aligned_cols=84 Identities=14% Similarity=0.126 Sum_probs=56.8
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEcCcccc-ccccchhhHHHhhcC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKC-HIRSHMLSLFERRKS 214 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~gD~~~~-~~~d~~~d~v~~~~~ 214 (281)
.+++||=.|++.|. ++..|++.|++|+.++.++.-.+.+.+.+... .++.++.+|+.+. ......++.+. ..
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~--~~ 88 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIK--TH 88 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHH--HH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHH--Hh
Confidence 46788988876553 44445556899999999998887777666543 3799999999875 43233333332 12
Q ss_pred CCCccEEEEcCC
Q 023482 215 SSGFAKVVANIP 226 (281)
Q Consensus 215 ~~~~d~Vi~n~P 226 (281)
.+..|++|.|.-
T Consensus 89 ~g~iD~lv~nAg 100 (311)
T 3o26_A 89 FGKLDILVNNAG 100 (311)
T ss_dssp HSSCCEEEECCC
T ss_pred CCCCCEEEECCc
Confidence 357899999853
No 337
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=94.15 E-value=0.17 Score=43.40 Aligned_cols=83 Identities=20% Similarity=0.278 Sum_probs=55.0
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
.+++||=.|++.|. ++..|++.|++|+.++.+++.++...+.+...+++.++.+|+.+....+..++.+. ...+.
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~--~~~g~ 105 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALG--ELSAR 105 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHH--HHCSC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHH--HhcCC
Confidence 46788988876543 33444556899999999998877766666544478888899877543222233221 22357
Q ss_pred ccEEEEcC
Q 023482 218 FAKVVANI 225 (281)
Q Consensus 218 ~d~Vi~n~ 225 (281)
.|++|.|.
T Consensus 106 iD~lvnnA 113 (276)
T 2b4q_A 106 LDILVNNA 113 (276)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 89999874
No 338
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=94.15 E-value=0.21 Score=42.85 Aligned_cols=84 Identities=13% Similarity=0.161 Sum_probs=56.9
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeC-CHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEK-DQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~-s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
.++++|=.|++.|. ++..|++.|++|+.++. +++.++.+.+.+... .++.++.+|+.+....+..++.+. ...
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~--~~~ 105 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVV--AEF 105 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHH--HHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH--HHc
Confidence 56789988876654 44555566899999996 777776665555433 489999999988654443444332 223
Q ss_pred CCccEEEEcCC
Q 023482 216 SGFAKVVANIP 226 (281)
Q Consensus 216 ~~~d~Vi~n~P 226 (281)
+..|++|.|.-
T Consensus 106 g~iD~lvnnAg 116 (280)
T 4da9_A 106 GRIDCLVNNAG 116 (280)
T ss_dssp SCCCEEEEECC
T ss_pred CCCCEEEECCC
Confidence 57899998753
No 339
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=94.11 E-value=0.22 Score=42.41 Aligned_cols=82 Identities=12% Similarity=0.159 Sum_probs=54.4
Q ss_pred CCCEEEEEcCCccHHHHHH----HHcCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCC
Q 023482 141 EGDIVLEIGPGTGSLTNVL----LNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~l----a~~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
.+++||=.|++ |.++..+ ++.|.+|++++.++..++...+.+... .++.++.+|+.+...-+..++.+. ...
T Consensus 30 ~~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~--~~~ 106 (272)
T 1yb1_A 30 TGEIVLITGAG-HGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVK--AEI 106 (272)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH--HHT
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHH--HHC
Confidence 46788888865 4455444 445889999999998777666555433 389999999987543222233221 223
Q ss_pred CCccEEEEcC
Q 023482 216 SGFAKVVANI 225 (281)
Q Consensus 216 ~~~d~Vi~n~ 225 (281)
+..|+||.|.
T Consensus 107 g~iD~li~~A 116 (272)
T 1yb1_A 107 GDVSILVNNA 116 (272)
T ss_dssp CCCSEEEECC
T ss_pred CCCcEEEECC
Confidence 5789999875
No 340
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=94.10 E-value=0.11 Score=44.13 Aligned_cols=84 Identities=13% Similarity=0.114 Sum_probs=59.9
Q ss_pred CCCEEEEEcC----CccH-HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEcCccccccccchhhHHHhhc
Q 023482 141 EGDIVLEIGP----GTGS-LTNVLLNAGATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLSLFERRK 213 (281)
Q Consensus 141 ~~~~VLDiGc----G~G~-~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~gD~~~~~~~d~~~d~v~~~~ 213 (281)
+++++|=-|. |.|. ++..|++.|++|+.++.+++.++.+.+.++.. .++.++.+|+.+..--...++.+. .
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~--~ 82 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIG--K 82 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHH--H
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHH--H
Confidence 5788998884 4554 56667778999999999998888877776643 378899999887543333333332 3
Q ss_pred CCCCccEEEEcCC
Q 023482 214 SSSGFAKVVANIP 226 (281)
Q Consensus 214 ~~~~~d~Vi~n~P 226 (281)
..+..|++|.|.-
T Consensus 83 ~~G~iD~lvnnAg 95 (256)
T 4fs3_A 83 DVGNIDGVYHSIA 95 (256)
T ss_dssp HHCCCSEEEECCC
T ss_pred HhCCCCEEEeccc
Confidence 3477899998743
No 341
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=94.05 E-value=0.21 Score=42.81 Aligned_cols=83 Identities=14% Similarity=0.165 Sum_probs=56.4
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCC----------------HHHHHHHHHHhcCC-CCeEEEEcCccccc
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKD----------------QHMVGLVRERFASI-DQLKVLQEDFVKCH 200 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s----------------~~~l~~a~~~~~~~-~~v~~~~gD~~~~~ 200 (281)
.++++|=.|++.|. ++..|++.|++|+.+|.+ ++.++.+.+.+... .++.++.+|+.+..
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 89 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD 89 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence 56789999987664 455556669999999987 66666666555443 48999999998754
Q ss_pred cccchhhHHHhhcCCCCccEEEEcC
Q 023482 201 IRSHMLSLFERRKSSSGFAKVVANI 225 (281)
Q Consensus 201 ~~d~~~d~v~~~~~~~~~d~Vi~n~ 225 (281)
--+..++.+. ...+..|++|.|.
T Consensus 90 ~v~~~~~~~~--~~~g~id~lv~nA 112 (286)
T 3uve_A 90 ALKAAVDSGV--EQLGRLDIIVANA 112 (286)
T ss_dssp HHHHHHHHHH--HHHSCCCEEEECC
T ss_pred HHHHHHHHHH--HHhCCCCEEEECC
Confidence 3333333322 2235789999874
No 342
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=94.04 E-value=0.1 Score=51.76 Aligned_cols=54 Identities=17% Similarity=0.187 Sum_probs=43.3
Q ss_pred CEEEEEcCCccHHHHHHHHcC------C-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCcccc
Q 023482 143 DIVLEIGPGTGSLTNVLLNAG------A-TVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKC 199 (281)
Q Consensus 143 ~~VLDiGcG~G~~t~~la~~~------~-~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~ 199 (281)
-+|+|+.||.|.++.-+.+.| . -+.++|+++.+++.-+.|+. +..+.+.|+.++
T Consensus 213 ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp---~~~~~~~di~~i 273 (784)
T 4ft4_B 213 ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHP---QTEVRNEKADEF 273 (784)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCT---TSEEEESCHHHH
T ss_pred CeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCC---CCceecCcHHHh
Confidence 479999999999998887664 2 57899999999999988876 456667776543
No 343
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=94.03 E-value=0.19 Score=43.59 Aligned_cols=84 Identities=14% Similarity=0.103 Sum_probs=56.7
Q ss_pred CCCEEEEEcCC----ccH-HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCC
Q 023482 141 EGDIVLEIGPG----TGS-LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 141 ~~~~VLDiGcG----~G~-~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
.++++|=.|.+ .|. ++..+++.|++|+.++.++...+.+++.....+++.++.+|+.+..--+..++.+. ...
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~--~~~ 107 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLE--KKW 107 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHH--HHT
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHH--Hhc
Confidence 57889999965 333 55666777999999999976665555444433578899999987543333333332 234
Q ss_pred CCccEEEEcCC
Q 023482 216 SGFAKVVANIP 226 (281)
Q Consensus 216 ~~~d~Vi~n~P 226 (281)
+..|++|.|.-
T Consensus 108 g~iD~lVnnAG 118 (293)
T 3grk_A 108 GKLDFLVHAIG 118 (293)
T ss_dssp SCCSEEEECCC
T ss_pred CCCCEEEECCc
Confidence 67899998743
No 344
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=94.01 E-value=0.23 Score=42.08 Aligned_cols=83 Identities=10% Similarity=0.103 Sum_probs=55.0
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
.++++|=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+... .++.++.+|+.+..-....++.+. ...+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~--~~~g 83 (262)
T 1zem_A 6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVV--RDFG 83 (262)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHH--HHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH--HHhC
Confidence 46788988876553 34444556899999999998877766665543 378999999887542222232221 2235
Q ss_pred CccEEEEcC
Q 023482 217 GFAKVVANI 225 (281)
Q Consensus 217 ~~d~Vi~n~ 225 (281)
..|++|.|.
T Consensus 84 ~id~lv~nA 92 (262)
T 1zem_A 84 KIDFLFNNA 92 (262)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 789999874
No 345
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=94.00 E-value=0.18 Score=42.80 Aligned_cols=83 Identities=18% Similarity=0.206 Sum_probs=57.0
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEcCccccccccchhhHHHhhcCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
.++++|=.|.+.|. ++..|++.|++|+.++.+++.++.+.+.+... .++.++.+|+.+..-.+..++.+. ...
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~--~~~ 86 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAV--EEF 86 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHH--HHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHH--HHh
Confidence 56788888866553 34445556899999999999888777766544 389999999987543333333222 223
Q ss_pred CCccEEEEcC
Q 023482 216 SGFAKVVANI 225 (281)
Q Consensus 216 ~~~d~Vi~n~ 225 (281)
+..|++|.|.
T Consensus 87 g~id~lvnnA 96 (262)
T 3pk0_A 87 GGIDVVCANA 96 (262)
T ss_dssp SCCSEEEECC
T ss_pred CCCCEEEECC
Confidence 5789999874
No 346
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=93.99 E-value=0.1 Score=44.96 Aligned_cols=83 Identities=17% Similarity=0.283 Sum_probs=57.8
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
.++++|=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+... .++.++.+|+.+....+..++.+. ...+
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~--~~~g 84 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAV--RRFG 84 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHH--HHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH--HHcC
Confidence 56788888876553 44555566899999999999888877776544 488999999887543333333322 2235
Q ss_pred CccEEEEcC
Q 023482 217 GFAKVVANI 225 (281)
Q Consensus 217 ~~d~Vi~n~ 225 (281)
..|++|.|.
T Consensus 85 ~iD~lvnnA 93 (280)
T 3tox_A 85 GLDTAFNNA 93 (280)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 789999874
No 347
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=93.90 E-value=0.2 Score=42.91 Aligned_cols=83 Identities=14% Similarity=0.223 Sum_probs=56.9
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCC----CeEEEEcCccccccccchhhHHHhhc
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASID----QLKVLQEDFVKCHIRSHMLSLFERRK 213 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~----~v~~~~gD~~~~~~~d~~~d~v~~~~ 213 (281)
.+++||=.|.+.|. ++..|++.|++|+.++.+++.++.+.+.+...+ ++.++.+|+.+..-....++.+. .
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~--~ 87 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT--A 87 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHH--H
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHH--H
Confidence 46789988876553 444555668999999999998887776665432 68899999987543333333322 2
Q ss_pred CCCCccEEEEcC
Q 023482 214 SSSGFAKVVANI 225 (281)
Q Consensus 214 ~~~~~d~Vi~n~ 225 (281)
..+..|++|.|.
T Consensus 88 ~~g~id~lv~nA 99 (281)
T 3svt_A 88 WHGRLHGVVHCA 99 (281)
T ss_dssp HHSCCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 235789999874
No 348
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=93.89 E-value=0.11 Score=44.56 Aligned_cols=83 Identities=18% Similarity=0.219 Sum_probs=57.6
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
.++++|=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+... .++.++.+|+.+.......++.+. ...+
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~--~~~g 102 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLD--EQGI 102 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHH--HHTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH--HHCC
Confidence 56788888866553 44455556899999999998888777666543 488999999987653333333332 2345
Q ss_pred CccEEEEcC
Q 023482 217 GFAKVVANI 225 (281)
Q Consensus 217 ~~d~Vi~n~ 225 (281)
..|++|.|.
T Consensus 103 ~iD~lv~nA 111 (271)
T 4ibo_A 103 DVDILVNNA 111 (271)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 789999874
No 349
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=93.85 E-value=0.14 Score=43.76 Aligned_cols=83 Identities=16% Similarity=0.131 Sum_probs=56.4
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
.++++|=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+... +++.++.+|+.+..-.+..++.+. ...+
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~--~~~g 80 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAV--DTWG 80 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH--HHHS
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH--HHcC
Confidence 35688888876553 44455566899999999998888777666543 478889999887543333333221 2235
Q ss_pred CccEEEEcC
Q 023482 217 GFAKVVANI 225 (281)
Q Consensus 217 ~~d~Vi~n~ 225 (281)
..|++|.|.
T Consensus 81 ~iD~lVnnA 89 (264)
T 3tfo_A 81 RIDVLVNNA 89 (264)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 789999874
No 350
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=93.82 E-value=0.26 Score=42.14 Aligned_cols=83 Identities=11% Similarity=0.113 Sum_probs=54.4
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
.+++||=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+... .++.++.+|+.+...-+..++.+. ...+
T Consensus 21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~--~~~g 98 (277)
T 2rhc_B 21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVV--ERYG 98 (277)
T ss_dssp TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH--HHTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH--HHhC
Confidence 46789988876543 33444556899999999988777665555432 478899999887543222233221 2335
Q ss_pred CccEEEEcC
Q 023482 217 GFAKVVANI 225 (281)
Q Consensus 217 ~~d~Vi~n~ 225 (281)
..|++|.|.
T Consensus 99 ~iD~lv~~A 107 (277)
T 2rhc_B 99 PVDVLVNNA 107 (277)
T ss_dssp SCSEEEECC
T ss_pred CCCEEEECC
Confidence 789999874
No 351
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=93.81 E-value=0.26 Score=42.18 Aligned_cols=83 Identities=14% Similarity=0.096 Sum_probs=56.7
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeC-------------CHHHHHHHHHHhcCC-CCeEEEEcCcccccccc
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEK-------------DQHMVGLVRERFASI-DQLKVLQEDFVKCHIRS 203 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~-------------s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d 203 (281)
.++++|=.|.+.|. ++..|++.|++|+.+|. +++.++.+.+.+... .++.++.+|+.+..--+
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 93 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALR 93 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence 57789988877654 44555666999999998 677777776666544 38899999998754333
Q ss_pred chhhHHHhhcCCCCccEEEEcC
Q 023482 204 HMLSLFERRKSSSGFAKVVANI 225 (281)
Q Consensus 204 ~~~d~v~~~~~~~~~d~Vi~n~ 225 (281)
..++.+. ...+..|++|.|.
T Consensus 94 ~~~~~~~--~~~g~id~lvnnA 113 (280)
T 3pgx_A 94 ELVADGM--EQFGRLDVVVANA 113 (280)
T ss_dssp HHHHHHH--HHHCCCCEEEECC
T ss_pred HHHHHHH--HHcCCCCEEEECC
Confidence 2333221 2235789999874
No 352
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=93.77 E-value=0.21 Score=42.46 Aligned_cols=83 Identities=16% Similarity=0.243 Sum_probs=57.4
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC--CCCeEEEEcCccccccccchhhHHHhhcCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFAS--IDQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~--~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
.+++||=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+.. ..++.++.+|+.+....+..++.+. ...
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~--~~~ 96 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAA--EAF 96 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHH--HHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH--HHc
Confidence 56788888876553 4445555689999999999888777665543 2489999999988654333333332 223
Q ss_pred CCccEEEEcC
Q 023482 216 SGFAKVVANI 225 (281)
Q Consensus 216 ~~~d~Vi~n~ 225 (281)
+..|++|.|.
T Consensus 97 g~id~lv~nA 106 (266)
T 4egf_A 97 GGLDVLVNNA 106 (266)
T ss_dssp TSCSEEEEEC
T ss_pred CCCCEEEECC
Confidence 5789999874
No 353
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=93.77 E-value=0.34 Score=41.28 Aligned_cols=83 Identities=16% Similarity=0.188 Sum_probs=54.4
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCC-
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSS- 215 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~- 215 (281)
.++++|=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+... .++.++.+|+.+....+..++.+. ...
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~--~~~~ 97 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVA--HVFD 97 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH--HHTT
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH--HHcC
Confidence 46788988865443 33444556899999999988777665555432 378999999887543333333222 122
Q ss_pred CCccEEEEcC
Q 023482 216 SGFAKVVANI 225 (281)
Q Consensus 216 ~~~d~Vi~n~ 225 (281)
+..|++|.|.
T Consensus 98 g~id~lv~nA 107 (273)
T 1ae1_A 98 GKLNILVNNA 107 (273)
T ss_dssp SCCCEEEECC
T ss_pred CCCcEEEECC
Confidence 6789999874
No 354
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=93.76 E-value=0.23 Score=41.74 Aligned_cols=83 Identities=17% Similarity=0.256 Sum_probs=54.4
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
.++++|=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+... .++.++.+|+.+....+..++.+. ...+
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~--~~~g 83 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTV--EALG 83 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH--HHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH--HHcC
Confidence 46788888866543 34444556899999999988877666555433 378999999887543222232221 1225
Q ss_pred CccEEEEcC
Q 023482 217 GFAKVVANI 225 (281)
Q Consensus 217 ~~d~Vi~n~ 225 (281)
..|++|.|.
T Consensus 84 ~id~lv~nA 92 (247)
T 2jah_A 84 GLDILVNNA 92 (247)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEECC
Confidence 789999874
No 355
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=93.75 E-value=0.12 Score=44.44 Aligned_cols=83 Identities=20% Similarity=0.263 Sum_probs=57.0
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
.++++|=.|.+.|. ++..|++.|++|+.++.+++.++.+.+.+... .++.++.+|+.+..--+..++.+. ...+
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~--~~~g 108 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMT--GELG 108 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHH--HHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH--HHcC
Confidence 56789988876553 44555566899999999988877776666543 488999999987643333333222 2235
Q ss_pred CccEEEEcC
Q 023482 217 GFAKVVANI 225 (281)
Q Consensus 217 ~~d~Vi~n~ 225 (281)
..|++|.|.
T Consensus 109 ~iD~lvnnA 117 (276)
T 3r1i_A 109 GIDIAVCNA 117 (276)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEECC
Confidence 789999874
No 356
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=93.70 E-value=0.26 Score=42.12 Aligned_cols=79 Identities=10% Similarity=0.093 Sum_probs=55.8
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
.++++|=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+. .++.++.+|+.+..-.+..++.+ ...+.
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~---~~~~~ 103 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELG--NRAEFVSTNVTSEDSVLAAIEAA---NQLGR 103 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHH---TTSSE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC--CceEEEEcCCCCHHHHHHHHHHH---HHhCC
Confidence 56788988876653 444555568999999999988887776663 48999999998764333333333 23456
Q ss_pred ccEEEEc
Q 023482 218 FAKVVAN 224 (281)
Q Consensus 218 ~d~Vi~n 224 (281)
.|++|.|
T Consensus 104 id~lv~~ 110 (281)
T 3ppi_A 104 LRYAVVA 110 (281)
T ss_dssp EEEEEEC
T ss_pred CCeEEEc
Confidence 8888877
No 357
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=93.68 E-value=0.095 Score=46.41 Aligned_cols=99 Identities=15% Similarity=0.128 Sum_probs=60.9
Q ss_pred HHhcCCCCCEEEEEcCC--ccHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHh
Q 023482 135 AAAAVQEGDIVLEIGPG--TGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFER 211 (281)
Q Consensus 135 ~~l~~~~~~~VLDiGcG--~G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~ 211 (281)
....+.++++||-+|+| .|..+..+++. |++|+++|.+++-++.+++.-. . .++ |..+.++ .+.+..
T Consensus 138 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga---~-~~~--~~~~~~~----~~~~~~ 207 (340)
T 3gms_A 138 ETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGA---A-YVI--DTSTAPL----YETVME 207 (340)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTC---S-EEE--ETTTSCH----HHHHHH
T ss_pred HhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCC---c-EEE--eCCcccH----HHHHHH
Confidence 45677889999999987 67777777775 8899999999988888876321 1 222 2211111 122221
Q ss_pred hcCCCCccEEEEcCCCcccHHHHHHhccCCCCc
Q 023482 212 RKSSSGFAKVVANIPFNISTDVIKQLLPMGDIF 244 (281)
Q Consensus 212 ~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~ 244 (281)
......+|+||.+..-......+ .++++++.+
T Consensus 208 ~~~~~g~Dvvid~~g~~~~~~~~-~~l~~~G~i 239 (340)
T 3gms_A 208 LTNGIGADAAIDSIGGPDGNELA-FSLRPNGHF 239 (340)
T ss_dssp HTTTSCEEEEEESSCHHHHHHHH-HTEEEEEEE
T ss_pred HhCCCCCcEEEECCCChhHHHHH-HHhcCCCEE
Confidence 13345799999876533333333 455555543
No 358
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=93.67 E-value=0.22 Score=43.20 Aligned_cols=83 Identities=17% Similarity=0.179 Sum_probs=55.8
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCC------------HHHHHHHHHHhcCC-CCeEEEEcCccccccccc
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKD------------QHMVGLVRERFASI-DQLKVLQEDFVKCHIRSH 204 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s------------~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~ 204 (281)
.++++|=.|++.|. ++..|++.|++|+.+|.+ ++.++.+...+... .++.++.+|+.+..--..
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 106 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQA 106 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence 56789999987664 445556669999999987 66666655555433 489999999987543333
Q ss_pred hhhHHHhhcCCCCccEEEEcC
Q 023482 205 MLSLFERRKSSSGFAKVVANI 225 (281)
Q Consensus 205 ~~d~v~~~~~~~~~d~Vi~n~ 225 (281)
.++.+. ...+..|++|.|.
T Consensus 107 ~~~~~~--~~~g~iD~lv~nA 125 (299)
T 3t7c_A 107 AVDDGV--TQLGRLDIVLANA 125 (299)
T ss_dssp HHHHHH--HHHSCCCEEEECC
T ss_pred HHHHHH--HHhCCCCEEEECC
Confidence 333322 2235789999873
No 359
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=93.64 E-value=0.22 Score=42.11 Aligned_cols=81 Identities=19% Similarity=0.289 Sum_probs=56.3
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
.++++|=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+. .++.++.+|+.+..-.+..++.+. ...+.
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~--~~~g~ 82 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG--PRVHALRSDIADLNEIAVLGAAAG--QTLGA 82 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--GGEEEEECCTTCHHHHHHHHHHHH--HHHSS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CcceEEEccCCCHHHHHHHHHHHH--HHhCC
Confidence 56789999976554 444555568999999999988877766653 378999999987643333333322 22357
Q ss_pred ccEEEEcC
Q 023482 218 FAKVVANI 225 (281)
Q Consensus 218 ~d~Vi~n~ 225 (281)
.|++|.|.
T Consensus 83 id~lv~nA 90 (255)
T 4eso_A 83 IDLLHINA 90 (255)
T ss_dssp EEEEEECC
T ss_pred CCEEEECC
Confidence 89999874
No 360
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=93.61 E-value=0.17 Score=42.69 Aligned_cols=83 Identities=14% Similarity=0.226 Sum_probs=56.5
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC---C-CCeEEEEcCccccccccchhhHHHhhc
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFAS---I-DQLKVLQEDFVKCHIRSHMLSLFERRK 213 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~---~-~~v~~~~gD~~~~~~~d~~~d~v~~~~ 213 (281)
.++++|=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+.. . .++.++.+|+.+..-.+..++.+. .
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~--~ 83 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH--Q 83 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH--H
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH--H
Confidence 46788988877653 4455556699999999999888777665532 2 478899999987543333333322 2
Q ss_pred CCCCccEEEEcC
Q 023482 214 SSSGFAKVVANI 225 (281)
Q Consensus 214 ~~~~~d~Vi~n~ 225 (281)
..+..|++|.|.
T Consensus 84 ~~g~iD~lvnnA 95 (250)
T 3nyw_A 84 KYGAVDILVNAA 95 (250)
T ss_dssp HHCCEEEEEECC
T ss_pred hcCCCCEEEECC
Confidence 235789999874
No 361
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=93.60 E-value=0.49 Score=42.21 Aligned_cols=99 Identities=11% Similarity=0.039 Sum_probs=61.1
Q ss_pred HHhcCCCCCEEEEEcCCc-cHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhh
Q 023482 135 AAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERR 212 (281)
Q Consensus 135 ~~l~~~~~~~VLDiGcG~-G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~ 212 (281)
+...+.++++||-+|+|. |..+..+++. |++|+++|.+++-++.+++.-. -.++..+..+ ..+.+...
T Consensus 183 ~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa----~~vi~~~~~~------~~~~v~~~ 252 (363)
T 3uog_A 183 EKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGA----DHGINRLEED------WVERVYAL 252 (363)
T ss_dssp TTTCCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTC----SEEEETTTSC------HHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCC----CEEEcCCccc------HHHHHHHH
Confidence 345677899999999874 7777777775 8899999999999988876422 1233211111 11122111
Q ss_pred cCCCCccEEEEcCCCcccHHHHHHhccCCCCc
Q 023482 213 KSSSGFAKVVANIPFNISTDVIKQLLPMGDIF 244 (281)
Q Consensus 213 ~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~ 244 (281)
.....+|+||-+.. ........+++.+++.+
T Consensus 253 ~~g~g~D~vid~~g-~~~~~~~~~~l~~~G~i 283 (363)
T 3uog_A 253 TGDRGADHILEIAG-GAGLGQSLKAVAPDGRI 283 (363)
T ss_dssp HTTCCEEEEEEETT-SSCHHHHHHHEEEEEEE
T ss_pred hCCCCceEEEECCC-hHHHHHHHHHhhcCCEE
Confidence 33447999998766 33333344555555554
No 362
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=93.60 E-value=0.22 Score=43.75 Aligned_cols=83 Identities=17% Similarity=0.137 Sum_probs=57.0
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEcCccccccccchhhHHHhhcC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSHMLSLFERRKS 214 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~---~v~~~~gD~~~~~~~d~~~d~v~~~~~ 214 (281)
.+++||=.|++.|. ++..|++.|.+|++++.+++.++.+.+.+...+ ++.++.+|+.+..-.+..++.+. ..
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~--~~ 84 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE--AR 84 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH--HH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH--Hh
Confidence 46789999977554 444555568999999999988877766554322 78999999987543333333332 23
Q ss_pred CCCccEEEEcC
Q 023482 215 SSGFAKVVANI 225 (281)
Q Consensus 215 ~~~~d~Vi~n~ 225 (281)
.+..|++|.|.
T Consensus 85 ~g~id~lv~nA 95 (319)
T 3ioy_A 85 FGPVSILCNNA 95 (319)
T ss_dssp TCCEEEEEECC
T ss_pred CCCCCEEEECC
Confidence 36789999874
No 363
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=93.59 E-value=0.36 Score=40.74 Aligned_cols=81 Identities=19% Similarity=0.226 Sum_probs=55.6
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
.++++|=.|++.|. ++..|++.|++|+.+|.+++.++.+...+. +++.++.+|+.+...-...++.+. ...+.
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~--~~~g~ 82 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG--PAAYAVQMDVTRQDSIDAAIAATV--EHAGG 82 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHHH--HHSSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CCceEEEeeCCCHHHHHHHHHHHH--HHcCC
Confidence 56789988866553 444555568999999999988877766653 478899999987543332333222 23457
Q ss_pred ccEEEEcC
Q 023482 218 FAKVVANI 225 (281)
Q Consensus 218 ~d~Vi~n~ 225 (281)
.|++|.|.
T Consensus 83 id~lv~~A 90 (259)
T 4e6p_A 83 LDILVNNA 90 (259)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999874
No 364
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=93.57 E-value=0.12 Score=44.49 Aligned_cols=82 Identities=20% Similarity=0.236 Sum_probs=56.8
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
.++++|=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+... +++.++.+|+.+.......++.+.. .+
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~---~g 108 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEA---IA 108 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHH---HS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH---hC
Confidence 56789988876553 44455556899999999987777666555433 4899999999876544434443322 26
Q ss_pred CccEEEEcC
Q 023482 217 GFAKVVANI 225 (281)
Q Consensus 217 ~~d~Vi~n~ 225 (281)
..|++|.|.
T Consensus 109 ~iD~lvnnA 117 (275)
T 4imr_A 109 PVDILVINA 117 (275)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 789999874
No 365
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=93.55 E-value=0.25 Score=41.14 Aligned_cols=82 Identities=16% Similarity=0.228 Sum_probs=53.5
Q ss_pred CCCEEEEEcCCccHHHHHH----HHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 141 EGDIVLEIGPGTGSLTNVL----LNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~l----a~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
.+++||=.|++ |.++..+ ++.|++|+.++.+++..+...+.+....++.++.+|+.+..--...++.+. ...+
T Consensus 5 ~~k~vlVtGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~--~~~~ 81 (251)
T 1zk4_A 5 DGKVAIITGGT-LGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATE--KAFG 81 (251)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHH--HHHS
T ss_pred CCcEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHH--HHhC
Confidence 45678888765 4445444 445889999999988777666655443589999999887542222222221 1225
Q ss_pred CccEEEEcC
Q 023482 217 GFAKVVANI 225 (281)
Q Consensus 217 ~~d~Vi~n~ 225 (281)
..|++|.|.
T Consensus 82 ~id~li~~A 90 (251)
T 1zk4_A 82 PVSTLVNNA 90 (251)
T ss_dssp SCCEEEECC
T ss_pred CCCEEEECC
Confidence 689999874
No 366
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.53 E-value=0.41 Score=36.23 Aligned_cols=70 Identities=19% Similarity=0.255 Sum_probs=48.0
Q ss_pred CCEEEEEcCCccHHHHHHH----HcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 142 GDIVLEIGPGTGSLTNVLL----NAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 142 ~~~VLDiGcG~G~~t~~la----~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
.++|+=+|+| .++..++ +.|.+|+++|.+++.++.++.. .+.++.+|..+... +.. .....
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~-----~~~~~~gd~~~~~~-------l~~-~~~~~ 70 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE-----GFDAVIADPTDESF-------YRS-LDLEG 70 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-----TCEEEECCTTCHHH-------HHH-SCCTT
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC-----CCcEEECCCCCHHH-------HHh-CCccc
Confidence 3578888885 4555444 3488999999999988877652 46788999876431 111 12246
Q ss_pred ccEEEEcCC
Q 023482 218 FAKVVANIP 226 (281)
Q Consensus 218 ~d~Vi~n~P 226 (281)
+|.||...|
T Consensus 71 ~d~vi~~~~ 79 (141)
T 3llv_A 71 VSAVLITGS 79 (141)
T ss_dssp CSEEEECCS
T ss_pred CCEEEEecC
Confidence 899998877
No 367
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=93.51 E-value=0.32 Score=41.19 Aligned_cols=82 Identities=13% Similarity=0.172 Sum_probs=53.3
Q ss_pred CCCEEEEEcCCccHHHHHH----HHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 141 EGDIVLEIGPGTGSLTNVL----LNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~l----a~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
.+++||=.|++ |.++..+ ++.|++|+.++.++...+...+.+...+++.++.+|+.+..--...++.+. ...+
T Consensus 15 ~~k~vlITGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~--~~~~ 91 (278)
T 2bgk_A 15 QDKVAIITGGA-GGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTI--AKHG 91 (278)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHH--HHHS
T ss_pred cCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH--HHcC
Confidence 46789988865 4445444 445889999999988776655555433479999999987543222222221 1225
Q ss_pred CccEEEEcC
Q 023482 217 GFAKVVANI 225 (281)
Q Consensus 217 ~~d~Vi~n~ 225 (281)
..|++|.|.
T Consensus 92 ~id~li~~A 100 (278)
T 2bgk_A 92 KLDIMFGNV 100 (278)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 689999764
No 368
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=93.50 E-value=0.3 Score=42.28 Aligned_cols=83 Identities=19% Similarity=0.190 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
.+++||=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+... .++.++.+|+.+.......++.+. ...+
T Consensus 33 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~--~~~g 110 (291)
T 3cxt_A 33 KGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQIE--SEVG 110 (291)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHH--HHTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHH--HHcC
Confidence 46789988865443 33444456899999999988777665555432 478899999887543222333221 2336
Q ss_pred CccEEEEcC
Q 023482 217 GFAKVVANI 225 (281)
Q Consensus 217 ~~d~Vi~n~ 225 (281)
..|++|.|.
T Consensus 111 ~iD~lvnnA 119 (291)
T 3cxt_A 111 IIDILVNNA 119 (291)
T ss_dssp CCCEEEECC
T ss_pred CCcEEEECC
Confidence 789999874
No 369
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=93.50 E-value=0.25 Score=42.21 Aligned_cols=83 Identities=17% Similarity=0.109 Sum_probs=55.1
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCC------------HHHHHHHHHHhcCC-CCeEEEEcCccccccccc
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKD------------QHMVGLVRERFASI-DQLKVLQEDFVKCHIRSH 204 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s------------~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~ 204 (281)
.+++||=.|++.|. ++..|++.|++|+.+|.+ .+.++.+...+... .++.++.+|+.+..-...
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 88 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR 88 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence 56789988876553 445555669999999987 66666665555433 489999999987543322
Q ss_pred hhhHHHhhcCCCCccEEEEcC
Q 023482 205 MLSLFERRKSSSGFAKVVANI 225 (281)
Q Consensus 205 ~~d~v~~~~~~~~~d~Vi~n~ 225 (281)
.++.+. ...+..|++|.|.
T Consensus 89 ~~~~~~--~~~g~id~lv~nA 107 (287)
T 3pxx_A 89 ELANAV--AEFGKLDVVVANA 107 (287)
T ss_dssp HHHHHH--HHHSCCCEEEECC
T ss_pred HHHHHH--HHcCCCCEEEECC
Confidence 232221 2235789999874
No 370
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=93.47 E-value=0.27 Score=41.24 Aligned_cols=82 Identities=13% Similarity=0.153 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCccHHHHHH----HHcCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCC
Q 023482 141 EGDIVLEIGPGTGSLTNVL----LNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~l----a~~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
.+++||=.|++ |.++..+ ++.|.+|+.++.++...+...+.+... .++.++.+|+.+...-...++.+. ...
T Consensus 12 ~~k~vlItGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~--~~~ 88 (260)
T 3awd_A 12 DNRVAIVTGGA-QNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVH--EQE 88 (260)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH--HHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH--HHc
Confidence 46788988865 4445444 445889999999988776655554432 479999999987532222222221 112
Q ss_pred CCccEEEEcC
Q 023482 216 SGFAKVVANI 225 (281)
Q Consensus 216 ~~~d~Vi~n~ 225 (281)
+..|+||.|.
T Consensus 89 ~~id~vi~~A 98 (260)
T 3awd_A 89 GRVDILVACA 98 (260)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 5689999874
No 371
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=93.41 E-value=0.18 Score=52.80 Aligned_cols=83 Identities=19% Similarity=0.110 Sum_probs=56.5
Q ss_pred CCEEEEEcCCccHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHH----hhcCC
Q 023482 142 GDIVLEIGPGTGSLTNVLLNAGA--TVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFE----RRKSS 215 (281)
Q Consensus 142 ~~~VLDiGcG~G~~t~~la~~~~--~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~----~~~~~ 215 (281)
.-+++|+.||.|.++..+...|. .+.++|+++.+++.-+.|+. +..++.+|+.++.-....-|+.. .+...
T Consensus 851 ~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p---~~~~~~~DI~~l~~~~~~gdi~~~~~~~lp~~ 927 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNP---GTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQK 927 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCT---TSEEECSCHHHHHHHHTTTCSBCSSCCBCCCT
T ss_pred CceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC---CCcEeeccHHHHhHhhhccchhhhhhhhcccc
Confidence 34799999999999999998886 48899999999998888865 45677777654310000000000 00122
Q ss_pred CCccEEEEcCCC
Q 023482 216 SGFAKVVANIPF 227 (281)
Q Consensus 216 ~~~d~Vi~n~P~ 227 (281)
+.+|+|++.||=
T Consensus 928 ~~vDvl~GGpPC 939 (1330)
T 3av4_A 928 GDVEMLCGGPPC 939 (1330)
T ss_dssp TTCSEEEECCCC
T ss_pred CccceEEecCCC
Confidence 468999998874
No 372
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=93.40 E-value=0.21 Score=42.60 Aligned_cols=83 Identities=19% Similarity=0.183 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCC------------HHHHHHHHHHhcCC-CCeEEEEcCccccccccc
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKD------------QHMVGLVRERFASI-DQLKVLQEDFVKCHIRSH 204 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s------------~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~ 204 (281)
.++++|=.|++.|. ++..|++.|++|+.+|.+ ++.++.+.+.+... .++.++.+|+.+..--+.
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 91 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSA 91 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 56789988876553 445556669999999987 66666555444332 489999999987543333
Q ss_pred hhhHHHhhcCCCCccEEEEcC
Q 023482 205 MLSLFERRKSSSGFAKVVANI 225 (281)
Q Consensus 205 ~~d~v~~~~~~~~~d~Vi~n~ 225 (281)
.++.+. ...+..|++|.|.
T Consensus 92 ~~~~~~--~~~g~id~lv~nA 110 (278)
T 3sx2_A 92 ALQAGL--DELGRLDIVVANA 110 (278)
T ss_dssp HHHHHH--HHHCCCCEEEECC
T ss_pred HHHHHH--HHcCCCCEEEECC
Confidence 333222 2235789999874
No 373
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=93.38 E-value=0.37 Score=40.63 Aligned_cols=83 Identities=18% Similarity=0.211 Sum_probs=53.4
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCC-
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSS- 215 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~- 215 (281)
.+++||=.|.+.|. ++..|++.|++|+.++.+++.++.+.+.+... .++.++.+|+.+..-....++.+. ...
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~--~~~~ 85 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVA--NHFH 85 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH--HHTT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH--HHcC
Confidence 46788888865443 33444556899999999988777665554332 378889999887543222222221 122
Q ss_pred CCccEEEEcC
Q 023482 216 SGFAKVVANI 225 (281)
Q Consensus 216 ~~~d~Vi~n~ 225 (281)
+..|++|.|.
T Consensus 86 g~id~lv~~A 95 (260)
T 2ae2_A 86 GKLNILVNNA 95 (260)
T ss_dssp TCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 5789999874
No 374
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.35 E-value=0.27 Score=37.48 Aligned_cols=74 Identities=23% Similarity=0.294 Sum_probs=48.3
Q ss_pred CEEEEEcCCc-cHH-HHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCCccE
Q 023482 143 DIVLEIGPGT-GSL-TNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAK 220 (281)
Q Consensus 143 ~~VLDiGcG~-G~~-t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~ 220 (281)
++|+=+|+|. |.. +..|.+.|.+|+++|.+++.++.++.. .+.++.||+.+.... .. .....+|.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~-----g~~~i~gd~~~~~~l-------~~-a~i~~ad~ 74 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRER-----GVRAVLGNAANEEIM-------QL-AHLECAKW 74 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-----TCEEEESCTTSHHHH-------HH-TTGGGCSE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHc-----CCCEEECCCCCHHHH-------Hh-cCcccCCE
Confidence 4788888763 332 223333488999999999998887652 567899998764321 10 11245788
Q ss_pred EEEcCCCcc
Q 023482 221 VVANIPFNI 229 (281)
Q Consensus 221 Vi~n~P~~~ 229 (281)
|+...|-..
T Consensus 75 vi~~~~~~~ 83 (140)
T 3fwz_A 75 LILTIPNGY 83 (140)
T ss_dssp EEECCSCHH
T ss_pred EEEECCChH
Confidence 888777543
No 375
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=93.29 E-value=0.29 Score=41.48 Aligned_cols=83 Identities=17% Similarity=0.185 Sum_probs=56.8
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC-C-C-CeEEEEcCccccccccchhhHHHhhcC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFAS-I-D-QLKVLQEDFVKCHIRSHMLSLFERRKS 214 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~-~-~-~v~~~~gD~~~~~~~d~~~d~v~~~~~ 214 (281)
.++++|=.|++.|. ++..+++.|++|+.++.+++.++.+.+.+.. . + ++.++.+|+.+..--...++.+. ..
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~--~~ 84 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACE--RT 84 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH--HH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHH--HH
Confidence 46789989977653 4455556689999999999888777666543 2 2 58999999987543333333322 22
Q ss_pred CCCccEEEEcC
Q 023482 215 SSGFAKVVANI 225 (281)
Q Consensus 215 ~~~~d~Vi~n~ 225 (281)
.+..|++|.|.
T Consensus 85 ~g~id~lvnnA 95 (265)
T 3lf2_A 85 LGCASILVNNA 95 (265)
T ss_dssp HCSCSEEEECC
T ss_pred cCCCCEEEECC
Confidence 35789999874
No 376
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=93.27 E-value=0.16 Score=43.38 Aligned_cols=83 Identities=12% Similarity=0.104 Sum_probs=55.7
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
.++++|=.|++.|. ++..|++.|++|+.++.+++.++.+...+... .++.++.+|+.+..-.+..++.+. ...+
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~--~~~g 104 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTL--KEFG 104 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHH--HHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHH--HHcC
Confidence 46788888865553 44455566899999999998887776655433 378899999887543333333221 2235
Q ss_pred CccEEEEcC
Q 023482 217 GFAKVVANI 225 (281)
Q Consensus 217 ~~d~Vi~n~ 225 (281)
..|++|.|.
T Consensus 105 ~iD~lvnnA 113 (270)
T 3ftp_A 105 ALNVLVNNA 113 (270)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 789999874
No 377
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=93.27 E-value=0.19 Score=45.48 Aligned_cols=48 Identities=23% Similarity=0.351 Sum_probs=40.5
Q ss_pred HHHhcCCCCCEEEEEcCCc-cHHHHHHHHc-CC-EEEEEeCCHHHHHHHHH
Q 023482 134 AAAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GA-TVLAIEKDQHMVGLVRE 181 (281)
Q Consensus 134 ~~~l~~~~~~~VLDiGcG~-G~~t~~la~~-~~-~v~gvD~s~~~l~~a~~ 181 (281)
+....+.++++||-+|+|. |.++..+++. |+ +|+++|.+++.++.+++
T Consensus 178 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 2dph_A 178 CVSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD 228 (398)
T ss_dssp HHHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT
T ss_pred HHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 3556778899999999986 8888888876 87 99999999999888764
No 378
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=93.24 E-value=0.3 Score=41.39 Aligned_cols=83 Identities=12% Similarity=0.089 Sum_probs=53.9
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC---CCCeEEEEcCccccccccchhhHHHhhcC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFAS---IDQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~---~~~v~~~~gD~~~~~~~d~~~d~v~~~~~ 214 (281)
.++++|=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+.. ..++.++.+|+.+..--...++.+. ..
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~--~~ 89 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATT--ER 89 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHH--HH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH--HH
Confidence 46789988876553 3444555689999999998877766554432 2478899999887543222232221 12
Q ss_pred CCCccEEEEcC
Q 023482 215 SSGFAKVVANI 225 (281)
Q Consensus 215 ~~~~d~Vi~n~ 225 (281)
.+..|++|.|.
T Consensus 90 ~g~id~lv~nA 100 (267)
T 1iy8_A 90 FGRIDGFFNNA 100 (267)
T ss_dssp HSCCSEEEECC
T ss_pred cCCCCEEEECC
Confidence 35789999874
No 379
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=93.24 E-value=0.29 Score=41.75 Aligned_cols=83 Identities=13% Similarity=0.134 Sum_probs=55.5
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeC-------------CHHHHHHHHHHhcCC-CCeEEEEcCcccccccc
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEK-------------DQHMVGLVRERFASI-DQLKVLQEDFVKCHIRS 203 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~-------------s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d 203 (281)
.++++|=.|++.|. ++..|++.|++|+.+|. +++.++.+.+..... .++.++.+|+.+..--.
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 89 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLR 89 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 56789988877654 44555666999999998 677666665554433 48999999998754333
Q ss_pred chhhHHHhhcCCCCccEEEEcC
Q 023482 204 HMLSLFERRKSSSGFAKVVANI 225 (281)
Q Consensus 204 ~~~d~v~~~~~~~~~d~Vi~n~ 225 (281)
..++.+. ...+..|++|.|.
T Consensus 90 ~~~~~~~--~~~g~id~lvnnA 109 (277)
T 3tsc_A 90 KVVDDGV--AALGRLDIIVANA 109 (277)
T ss_dssp HHHHHHH--HHHSCCCEEEECC
T ss_pred HHHHHHH--HHcCCCCEEEECC
Confidence 3333221 2235789999874
No 380
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=93.22 E-value=0.35 Score=40.64 Aligned_cols=81 Identities=20% Similarity=0.252 Sum_probs=56.7
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
.+++||=.|++.|. ++..|++.|++|+.++.+++.++.+.+... .++.++.+|+.+.......++.+. ...+.
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~--~~~g~ 83 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIG--DAALAVAADISKEADVDAAVEAAL--SKFGK 83 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--TTEEEEECCTTSHHHHHHHHHHHH--HHHSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHH--HhcCC
Confidence 46789999987653 455556668999999999998887776553 478999999987543333333222 22357
Q ss_pred ccEEEEcC
Q 023482 218 FAKVVANI 225 (281)
Q Consensus 218 ~d~Vi~n~ 225 (281)
.|++|.|.
T Consensus 84 id~li~~A 91 (261)
T 3n74_A 84 VDILVNNA 91 (261)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999874
No 381
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=93.18 E-value=0.14 Score=44.53 Aligned_cols=84 Identities=15% Similarity=0.131 Sum_probs=55.5
Q ss_pred CCCEEEEEcCC----ccH-HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCC
Q 023482 141 EGDIVLEIGPG----TGS-LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 141 ~~~~VLDiGcG----~G~-~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
.++++|=.|.+ .|. ++..|++.|++|+.++.++...+.+.+.....+.+.++.+|+.+..--+..++.+. ...
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~--~~~ 106 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLA--EEW 106 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHH--HHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHH--HHc
Confidence 56789999974 443 55666677999999999976555555444433567899999987543333333332 223
Q ss_pred CCccEEEEcCC
Q 023482 216 SGFAKVVANIP 226 (281)
Q Consensus 216 ~~~d~Vi~n~P 226 (281)
+..|++|.|.-
T Consensus 107 g~iD~lVnnAG 117 (296)
T 3k31_A 107 GSLDFVVHAVA 117 (296)
T ss_dssp SCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57899998753
No 382
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=93.17 E-value=0.18 Score=43.82 Aligned_cols=83 Identities=17% Similarity=0.175 Sum_probs=57.1
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEcCccccccccchhhHHHhhcCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
.+++||=.|.+.|. ++..|++.|++|+.++.+++.++.+.+.+... +++.++.+|+.+..-....++.+. ...
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~--~~~ 117 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVV--DAF 117 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHH--HHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHH--HHc
Confidence 56788888876553 44555566899999999998887777766544 389999999987543333333221 223
Q ss_pred CCccEEEEcC
Q 023482 216 SGFAKVVANI 225 (281)
Q Consensus 216 ~~~d~Vi~n~ 225 (281)
+..|++|.|.
T Consensus 118 g~iD~lvnnA 127 (293)
T 3rih_A 118 GALDVVCANA 127 (293)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 5789999874
No 383
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=93.17 E-value=0.28 Score=42.07 Aligned_cols=81 Identities=20% Similarity=0.269 Sum_probs=56.1
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
.++++|=.|++.|. ++..|++.|++|+.+|.+++.++.+.+.+. .++.++.+|+.+....+..++.+. ...+.
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~--~~~g~ 103 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIG--CGAAACRVDVSDEQQIIAMVDACV--AAFGG 103 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC--SSCEEEECCTTCHHHHHHHHHHHH--HHHSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC--CcceEEEecCCCHHHHHHHHHHHH--HHcCC
Confidence 56788988876653 455556679999999999988877766653 478899999987543333333221 22357
Q ss_pred ccEEEEcC
Q 023482 218 FAKVVANI 225 (281)
Q Consensus 218 ~d~Vi~n~ 225 (281)
.|++|.|.
T Consensus 104 iD~lvnnA 111 (277)
T 3gvc_A 104 VDKLVANA 111 (277)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999874
No 384
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=93.16 E-value=0.27 Score=42.07 Aligned_cols=83 Identities=14% Similarity=0.148 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-C---CeEEEEcCccccccccchhhHHHhhc
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-D---QLKVLQEDFVKCHIRSHMLSLFERRK 213 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~---~v~~~~gD~~~~~~~d~~~d~v~~~~ 213 (281)
.++++|=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+... . ++.++.+|+.+....+..++.+. .
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~--~ 82 (280)
T 1xkq_A 5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL--K 82 (280)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH--H
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHH--H
Confidence 46788888865542 34444556899999999998877766655433 2 68999999987543222233221 1
Q ss_pred CCCCccEEEEcC
Q 023482 214 SSSGFAKVVANI 225 (281)
Q Consensus 214 ~~~~~d~Vi~n~ 225 (281)
..+..|++|.|.
T Consensus 83 ~~g~iD~lv~nA 94 (280)
T 1xkq_A 83 QFGKIDVLVNNA 94 (280)
T ss_dssp HHSCCCEEEECC
T ss_pred hcCCCCEEEECC
Confidence 235789999874
No 385
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=93.14 E-value=0.4 Score=40.29 Aligned_cols=82 Identities=17% Similarity=0.216 Sum_probs=52.1
Q ss_pred CCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 142 GDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 142 ~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
++++|=.|.+.|. ++..|++.|++|+.++.+++.++.+.+.+... .++.++.+|+.+...-...++.+. ...+.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~--~~~g~ 79 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQAR--KTLGG 79 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH--HHTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH--HHhCC
Confidence 3567777765442 33444556899999999988776665555432 478899999887542222222221 22357
Q ss_pred ccEEEEcC
Q 023482 218 FAKVVANI 225 (281)
Q Consensus 218 ~d~Vi~n~ 225 (281)
.|++|.|.
T Consensus 80 id~lv~nA 87 (256)
T 1geg_A 80 FDVIVNNA 87 (256)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999874
No 386
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=93.11 E-value=0.26 Score=41.42 Aligned_cols=81 Identities=16% Similarity=0.242 Sum_probs=55.9
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
.++++|=.|++.|. ++..+++.|++|+.++.+++.++.+...+. .++.++.+|+.+..--+..++.+. ...+.
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~--~~~g~ 80 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIG--KKARAIAADISDPGSVKALFAEIQ--ALTGG 80 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC--TTEEECCCCTTCHHHHHHHHHHHH--HHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CceEEEEcCCCCHHHHHHHHHHHH--HHCCC
Confidence 56789988876553 445555669999999999988877766553 478899999887543333333322 22357
Q ss_pred ccEEEEcC
Q 023482 218 FAKVVANI 225 (281)
Q Consensus 218 ~d~Vi~n~ 225 (281)
.|++|.|.
T Consensus 81 id~lv~nA 88 (247)
T 3rwb_A 81 IDILVNNA 88 (247)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 89999874
No 387
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=93.00 E-value=0.34 Score=40.38 Aligned_cols=80 Identities=13% Similarity=0.051 Sum_probs=54.7
Q ss_pred CCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCCc
Q 023482 142 GDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGF 218 (281)
Q Consensus 142 ~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~ 218 (281)
++++|=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+.. ++.++.+|+.+..-.+..++.+. ...+..
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~--~~~g~i 78 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGN--AVIGIVADLAHHEDVDVAFAAAV--EWGGLP 78 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG--GEEEEECCTTSHHHHHHHHHHHH--HHHCSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC--CceEEECCCCCHHHHHHHHHHHH--HhcCCC
Confidence 4678888876553 4445556689999999999988877766642 68999999987543333333222 223578
Q ss_pred cEEEEcC
Q 023482 219 AKVVANI 225 (281)
Q Consensus 219 d~Vi~n~ 225 (281)
|++|.|.
T Consensus 79 d~lvnnA 85 (235)
T 3l6e_A 79 ELVLHCA 85 (235)
T ss_dssp SEEEEEC
T ss_pred cEEEECC
Confidence 9999874
No 388
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=92.98 E-value=0.28 Score=41.95 Aligned_cols=82 Identities=17% Similarity=0.213 Sum_probs=52.8
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
.++++|=.|++.|. ++..|++.|++|+.++.++...+.+.+.....+++.++.+|+.+..-.....+.+ ...+.
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~---~~~g~ 106 (273)
T 3uf0_A 30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEEL---AATRR 106 (273)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHH---HHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH---HhcCC
Confidence 56789999976653 4555566689999999765544444433333348899999998754332222322 22367
Q ss_pred ccEEEEcC
Q 023482 218 FAKVVANI 225 (281)
Q Consensus 218 ~d~Vi~n~ 225 (281)
.|++|.|.
T Consensus 107 iD~lv~nA 114 (273)
T 3uf0_A 107 VDVLVNNA 114 (273)
T ss_dssp CCEEEECC
T ss_pred CcEEEECC
Confidence 89999874
No 389
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=92.93 E-value=0.23 Score=41.97 Aligned_cols=83 Identities=13% Similarity=0.103 Sum_probs=54.5
Q ss_pred CCCEEEEEcCC----ccH-HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCC
Q 023482 141 EGDIVLEIGPG----TGS-LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 141 ~~~~VLDiGcG----~G~-~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
.+++||=.|++ .|. ++..|++.|++|+.++.+....+.+++.....+++.++.+|+.+..-....++.+. ...
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~--~~~ 90 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLK--THW 90 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH--HHC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHH--HHc
Confidence 67899999964 332 34455556899999998865555555444444578899999987553333333332 234
Q ss_pred CCccEEEEcC
Q 023482 216 SGFAKVVANI 225 (281)
Q Consensus 216 ~~~d~Vi~n~ 225 (281)
+..|++|.|.
T Consensus 91 g~id~lv~nA 100 (271)
T 3ek2_A 91 DSLDGLVHSI 100 (271)
T ss_dssp SCEEEEEECC
T ss_pred CCCCEEEECC
Confidence 6789999874
No 390
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=92.93 E-value=0.28 Score=41.77 Aligned_cols=83 Identities=17% Similarity=0.216 Sum_probs=54.9
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeC-CHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEK-DQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~-s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
.+++||=.|++.|. ++..+++.|++|+.++. +++..+...+.+... .++.++.+|+.+..-....++.+. ...
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~--~~~ 105 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIV--QSD 105 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH--HHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH--Hhc
Confidence 56789988877653 44555556899999999 666666665555443 389999999887543333333222 223
Q ss_pred CCccEEEEcC
Q 023482 216 SGFAKVVANI 225 (281)
Q Consensus 216 ~~~d~Vi~n~ 225 (281)
+..|++|.|.
T Consensus 106 g~id~li~nA 115 (271)
T 4iin_A 106 GGLSYLVNNA 115 (271)
T ss_dssp SSCCEEEECC
T ss_pred CCCCEEEECC
Confidence 5789999874
No 391
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=92.90 E-value=0.35 Score=40.91 Aligned_cols=83 Identities=12% Similarity=0.161 Sum_probs=55.5
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEE-eCCHHHHHHHHHHhcCCC-CeEEEEcCccccccccchhhHHHhhcCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAI-EKDQHMVGLVRERFASID-QLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gv-D~s~~~l~~a~~~~~~~~-~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
.++++|=.|++.|. ++..|++.|++|+.+ +.+++.++.+.+.+...+ ++.++.+|+.+..--+..++.+. ...
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~--~~~ 80 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQID--ETF 80 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH--HHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH--HHc
Confidence 46788888866543 344455568999886 889888877776665543 89999999987543333333322 223
Q ss_pred CCccEEEEcC
Q 023482 216 SGFAKVVANI 225 (281)
Q Consensus 216 ~~~d~Vi~n~ 225 (281)
+..|++|.|.
T Consensus 81 g~id~lv~nA 90 (258)
T 3oid_A 81 GRLDVFVNNA 90 (258)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 5789999875
No 392
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=92.86 E-value=0.3 Score=41.81 Aligned_cols=81 Identities=14% Similarity=0.147 Sum_probs=55.2
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
.++++|=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+. +++.++.+|+.+..-.+..++.+. ...+.
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~--~~~g~ 102 (272)
T 4dyv_A 27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG--DDALCVPTDVTDPDSVRALFTATV--EKFGR 102 (272)
T ss_dssp -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT--SCCEEEECCTTSHHHHHHHHHHHH--HHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC--CCeEEEEecCCCHHHHHHHHHHHH--HHcCC
Confidence 56788888876553 445555668999999999988877766654 478999999987543333333222 22357
Q ss_pred ccEEEEcC
Q 023482 218 FAKVVANI 225 (281)
Q Consensus 218 ~d~Vi~n~ 225 (281)
.|++|.|.
T Consensus 103 iD~lVnnA 110 (272)
T 4dyv_A 103 VDVLFNNA 110 (272)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999874
No 393
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=92.82 E-value=0.37 Score=41.34 Aligned_cols=81 Identities=14% Similarity=0.179 Sum_probs=55.6
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
.++++|=.|++.|. ++..|++.|++|+.++.+++.++....... .++.++.+|+.+..-....++.+. ...+.
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~--~~~g~ 79 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHG--GNAVGVVGDVRSLQDQKRAAERCL--AAFGK 79 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTB--TTEEEEECCTTCHHHHHHHHHHHH--HHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcC--CcEEEEEcCCCCHHHHHHHHHHHH--HhcCC
Confidence 46788988877653 445556668999999999988877665543 488999999987543333333322 22357
Q ss_pred ccEEEEcC
Q 023482 218 FAKVVANI 225 (281)
Q Consensus 218 ~d~Vi~n~ 225 (281)
.|++|.|.
T Consensus 80 iD~lvnnA 87 (281)
T 3zv4_A 80 IDTLIPNA 87 (281)
T ss_dssp CCEEECCC
T ss_pred CCEEEECC
Confidence 89999874
No 394
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=92.81 E-value=0.28 Score=41.45 Aligned_cols=84 Identities=19% Similarity=0.212 Sum_probs=53.4
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC-CCCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFAS-IDQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~-~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
.++++|=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+.. ..++.++.+|+.+..--...++.+.. ...+
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-~~~g 82 (260)
T 2qq5_A 4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDR-EQQG 82 (260)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHH-HHTT
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHH-hcCC
Confidence 45678888865443 3344445689999999998877766555432 23788999998875432223332211 1146
Q ss_pred CccEEEEcC
Q 023482 217 GFAKVVANI 225 (281)
Q Consensus 217 ~~d~Vi~n~ 225 (281)
..|++|.|.
T Consensus 83 ~id~lvnnA 91 (260)
T 2qq5_A 83 RLDVLVNNA 91 (260)
T ss_dssp CCCEEEECC
T ss_pred CceEEEECC
Confidence 789999886
No 395
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=92.79 E-value=0.42 Score=40.93 Aligned_cols=81 Identities=14% Similarity=0.169 Sum_probs=55.2
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
.++++|=.|++.|. ++..|++.|++|+.++.+++.++.+..... .++.++.+|+.+..-.+..++.+. ...+.
T Consensus 26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~--~~~g~ 101 (277)
T 4dqx_A 26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIG--SKAFGVRVDVSSAKDAESMVEKTT--AKWGR 101 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHHH--HHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHH--HHcCC
Confidence 46789988876653 445555668999999999988776665543 478899999887543333333222 22357
Q ss_pred ccEEEEcC
Q 023482 218 FAKVVANI 225 (281)
Q Consensus 218 ~d~Vi~n~ 225 (281)
.|++|.|.
T Consensus 102 iD~lv~nA 109 (277)
T 4dqx_A 102 VDVLVNNA 109 (277)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999874
No 396
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=92.78 E-value=0.25 Score=42.25 Aligned_cols=81 Identities=19% Similarity=0.191 Sum_probs=53.0
Q ss_pred CCCEEEEEcCC----ccH-HHHHHHHcCCEEEEEeCCH--HHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhc
Q 023482 141 EGDIVLEIGPG----TGS-LTNVLLNAGATVLAIEKDQ--HMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRK 213 (281)
Q Consensus 141 ~~~~VLDiGcG----~G~-~t~~la~~~~~v~gvD~s~--~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~ 213 (281)
.+++||=.|.+ .|. ++..+++.|++|+.++.++ +.++... ...+++.++.+|+.+..--...++.+. .
T Consensus 25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~--~ 99 (280)
T 3nrc_A 25 AGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLC---AEFNPAAVLPCDVISDQEIKDLFVELG--K 99 (280)
T ss_dssp TTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHH---GGGCCSEEEECCTTCHHHHHHHHHHHH--H
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHH---HhcCCceEEEeecCCHHHHHHHHHHHH--H
Confidence 57899999943 454 5666677799999999987 3333332 233478999999987543333333332 2
Q ss_pred CCCCccEEEEcCC
Q 023482 214 SSSGFAKVVANIP 226 (281)
Q Consensus 214 ~~~~~d~Vi~n~P 226 (281)
..+..|++|.|.-
T Consensus 100 ~~g~id~li~nAg 112 (280)
T 3nrc_A 100 VWDGLDAIVHSIA 112 (280)
T ss_dssp HCSSCCEEEECCC
T ss_pred HcCCCCEEEECCc
Confidence 3467899998753
No 397
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=92.77 E-value=0.3 Score=42.74 Aligned_cols=83 Identities=14% Similarity=0.137 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCC------------HHHHHHHHHHhcCC-CCeEEEEcCccccccccc
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKD------------QHMVGLVRERFASI-DQLKVLQEDFVKCHIRSH 204 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s------------~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~ 204 (281)
.++++|=.|++.|. ++..|++.|++|+.+|.+ ++.++.+.+.+... .++.++.+|+.+..--+.
T Consensus 45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 124 (317)
T 3oec_A 45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQA 124 (317)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence 56789988876654 445556669999999986 66666555444433 489999999987543332
Q ss_pred hhhHHHhhcCCCCccEEEEcC
Q 023482 205 MLSLFERRKSSSGFAKVVANI 225 (281)
Q Consensus 205 ~~d~v~~~~~~~~~d~Vi~n~ 225 (281)
.++.+. ...+..|++|.|.
T Consensus 125 ~~~~~~--~~~g~iD~lVnnA 143 (317)
T 3oec_A 125 VVDEAL--AEFGHIDILVSNV 143 (317)
T ss_dssp HHHHHH--HHHSCCCEEEECC
T ss_pred HHHHHH--HHcCCCCEEEECC
Confidence 333221 2235789999874
No 398
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=92.76 E-value=0.39 Score=40.53 Aligned_cols=83 Identities=12% Similarity=0.161 Sum_probs=53.1
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC--CCCeEEEEcCccccccccchhhHHHhhcCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFAS--IDQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~--~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
.+++||=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+.. ..++.++.+|+.+..--+..++.+. ...
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~--~~~ 83 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVR--SSF 83 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHH--HHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH--HHc
Confidence 46788888866442 3344455689999999998877665554432 2478899999887543222222221 122
Q ss_pred CCccEEEEcC
Q 023482 216 SGFAKVVANI 225 (281)
Q Consensus 216 ~~~d~Vi~n~ 225 (281)
+..|++|.|.
T Consensus 84 g~id~lv~~A 93 (263)
T 3ai3_A 84 GGADILVNNA 93 (263)
T ss_dssp SSCSEEEECC
T ss_pred CCCCEEEECC
Confidence 5689999874
No 399
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=92.76 E-value=0.29 Score=41.59 Aligned_cols=78 Identities=18% Similarity=0.154 Sum_probs=53.5
Q ss_pred CEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCCcc
Q 023482 143 DIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFA 219 (281)
Q Consensus 143 ~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d 219 (281)
++||=-|.+.|. ++..+++.|++|+.+|++++.++.+.+ ..+++..+.+|+.+..-.+..++.+. ...+..|
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~v~~~~--~~~g~iD 77 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK---ERPNLFYFHGDVADPLTLKKFVEYAM--EKLQRID 77 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT---TCTTEEEEECCTTSHHHHHHHHHHHH--HHHSCCC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---hcCCEEEEEecCCCHHHHHHHHHHHH--HHcCCCC
Confidence 567777877664 455666679999999999887665443 33488899999987543333333322 3347789
Q ss_pred EEEEcC
Q 023482 220 KVVANI 225 (281)
Q Consensus 220 ~Vi~n~ 225 (281)
++|.|-
T Consensus 78 iLVNNA 83 (247)
T 3ged_A 78 VLVNNA 83 (247)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 999874
No 400
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=92.74 E-value=0.33 Score=40.87 Aligned_cols=83 Identities=17% Similarity=0.173 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
.+++||=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+... .++.++.+|+.+..-....++.+. ...+
T Consensus 13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~--~~~g 90 (260)
T 2zat_A 13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAV--NLHG 90 (260)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH--HHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHH--HHcC
Confidence 46788888865442 33444456899999999988776655554432 378889999876532222222221 1225
Q ss_pred CccEEEEcC
Q 023482 217 GFAKVVANI 225 (281)
Q Consensus 217 ~~d~Vi~n~ 225 (281)
..|++|.|.
T Consensus 91 ~iD~lv~~A 99 (260)
T 2zat_A 91 GVDILVSNA 99 (260)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 789999874
No 401
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=92.70 E-value=0.39 Score=41.00 Aligned_cols=83 Identities=16% Similarity=0.144 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCC------------HHHHHHHHHHhcCC-CCeEEEEcCccccccccc
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKD------------QHMVGLVRERFASI-DQLKVLQEDFVKCHIRSH 204 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s------------~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~ 204 (281)
.++++|=.|++.|. ++..|++.|++|+.+|.+ .+.++......... .++.++.+|+.+..--+.
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 88 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES 88 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 56789999977653 445555669999999986 55555554444333 489999999987543333
Q ss_pred hhhHHHhhcCCCCccEEEEcC
Q 023482 205 MLSLFERRKSSSGFAKVVANI 225 (281)
Q Consensus 205 ~~d~v~~~~~~~~~d~Vi~n~ 225 (281)
.++.+. ...+..|++|.|.
T Consensus 89 ~~~~~~--~~~g~id~lv~nA 107 (281)
T 3s55_A 89 FVAEAE--DTLGGIDIAITNA 107 (281)
T ss_dssp HHHHHH--HHHTCCCEEEECC
T ss_pred HHHHHH--HhcCCCCEEEECC
Confidence 333222 2235789999874
No 402
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=92.59 E-value=0.28 Score=42.89 Aligned_cols=71 Identities=15% Similarity=0.237 Sum_probs=46.7
Q ss_pred HHHHHHhc-----CCCCCEEEEEcC------CccHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCc
Q 023482 131 DQLAAAAA-----VQEGDIVLEIGP------GTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDF 196 (281)
Q Consensus 131 ~~l~~~l~-----~~~~~~VLDiGc------G~G~~t~~la~~---~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~ 196 (281)
..+.+.++ ...+.+|||+|+ ..|.. .+.+. ++.|+++|+.+-.. ..+ .+++||.
T Consensus 94 tqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~s---------da~-~~IqGD~ 161 (344)
T 3r24_A 94 TQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVS---------DAD-STLIGDC 161 (344)
T ss_dssp HHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBC---------SSS-EEEESCG
T ss_pred HHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCccccc---------CCC-eEEEccc
Confidence 34555553 346789999996 67773 33322 46999999986321 113 4599997
Q ss_pred cccccccchhhHHHhhcCCCCccEEEEcCC
Q 023482 197 VKCHIRSHMLSLFERRKSSSGFAKVVANIP 226 (281)
Q Consensus 197 ~~~~~~d~~~d~v~~~~~~~~~d~Vi~n~P 226 (281)
.++ ...+++|+|+|+..
T Consensus 162 ~~~-------------~~~~k~DLVISDMA 178 (344)
T 3r24_A 162 ATV-------------HTANKWDLIISDMY 178 (344)
T ss_dssp GGE-------------EESSCEEEEEECCC
T ss_pred ccc-------------ccCCCCCEEEecCC
Confidence 664 23478999999753
No 403
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=92.59 E-value=0.33 Score=41.36 Aligned_cols=83 Identities=17% Similarity=0.126 Sum_probs=54.9
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeC-CHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEK-DQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~-s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
.+++||=.|++.|. ++..|++.|++|+.++. ++...+.+.+.+... .++.++.+|+.+..--+..++.+. ...
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~--~~~ 104 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVI--ERW 104 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH--HHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH--HHc
Confidence 46788888876553 44455566899999998 777766665555433 488999999987643333333322 223
Q ss_pred CCccEEEEcC
Q 023482 216 SGFAKVVANI 225 (281)
Q Consensus 216 ~~~d~Vi~n~ 225 (281)
+..|++|.|.
T Consensus 105 g~id~lv~nA 114 (269)
T 4dmm_A 105 GRLDVLVNNA 114 (269)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 5789999874
No 404
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=92.58 E-value=0.35 Score=40.59 Aligned_cols=81 Identities=17% Similarity=0.259 Sum_probs=55.4
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
.++++|=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+.. ++.++.+|+.+..--+..++.+. ...+.
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~--~~~g~ 83 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD--NGKGMALNVTNPESIEAVLKAIT--DEFGG 83 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG--GEEEEECCTTCHHHHHHHHHHHH--HHHCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc--cceEEEEeCCCHHHHHHHHHHHH--HHcCC
Confidence 56788988876553 4455556699999999999888777666542 57888999887543333333322 22357
Q ss_pred ccEEEEcC
Q 023482 218 FAKVVANI 225 (281)
Q Consensus 218 ~d~Vi~n~ 225 (281)
.|++|.|.
T Consensus 84 iD~lv~nA 91 (248)
T 3op4_A 84 VDILVNNA 91 (248)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 89999874
No 405
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=92.52 E-value=0.38 Score=41.10 Aligned_cols=81 Identities=10% Similarity=0.126 Sum_probs=53.6
Q ss_pred CEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCCcc
Q 023482 143 DIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFA 219 (281)
Q Consensus 143 ~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d 219 (281)
+++|=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+....++.++.+|+.+..--...++.+. ...+..|
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~--~~~g~iD 99 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLP--EEFATLR 99 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCC--GGGSSCC
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHH--HHhCCCC
Confidence 678888876553 44555666899999999998887766655433578899999887532222222111 2235689
Q ss_pred EEEEcC
Q 023482 220 KVVANI 225 (281)
Q Consensus 220 ~Vi~n~ 225 (281)
++|.|.
T Consensus 100 ~lvnnA 105 (272)
T 2nwq_A 100 GLINNA 105 (272)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 999874
No 406
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=92.50 E-value=0.54 Score=41.46 Aligned_cols=95 Identities=17% Similarity=0.214 Sum_probs=59.2
Q ss_pred cCCCCCEEEEEcC--CccHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcC
Q 023482 138 AVQEGDIVLEIGP--GTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (281)
Q Consensus 138 ~~~~~~~VLDiGc--G~G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~ 214 (281)
.+.++++||-+|+ |.|..+..+++. |++|++++.+++.++.+++. .. . .++ |..+.++ .+.+.....
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~-ga--~-~~~--d~~~~~~----~~~~~~~~~ 232 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKAL-GA--D-ETV--NYTHPDW----PKEVRRLTG 232 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-TC--S-EEE--ETTSTTH----HHHHHHHTT
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc-CC--C-EEE--cCCcccH----HHHHHHHhC
Confidence 5678899999998 678888888775 88999999999999888753 21 1 122 2222111 112211122
Q ss_pred CCCccEEEEcCCCcccHHHHHHhccCCCC
Q 023482 215 SSGFAKVVANIPFNISTDVIKQLLPMGDI 243 (281)
Q Consensus 215 ~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~ 243 (281)
...+|+||.+.. ........++++.++.
T Consensus 233 ~~~~d~vi~~~g-~~~~~~~~~~l~~~G~ 260 (343)
T 2eih_A 233 GKGADKVVDHTG-ALYFEGVIKATANGGR 260 (343)
T ss_dssp TTCEEEEEESSC-SSSHHHHHHHEEEEEE
T ss_pred CCCceEEEECCC-HHHHHHHHHhhccCCE
Confidence 347999998876 3344444455555544
No 407
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=92.48 E-value=0.33 Score=40.85 Aligned_cols=83 Identities=16% Similarity=0.186 Sum_probs=54.1
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEcCc--cccccccchhhHHHhhc
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDF--VKCHIRSHMLSLFERRK 213 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~gD~--~~~~~~d~~~d~v~~~~ 213 (281)
.++++|=.|.+.|. ++..|++.|++|+.++.+++.++.+.+.+... .++.++.+|+ .+.......++.+. .
T Consensus 11 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~--~ 88 (252)
T 3f1l_A 11 NDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIA--V 88 (252)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHH--H
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHH--H
Confidence 56789988876553 44455556899999999998887766655422 2788999998 43322222222221 2
Q ss_pred CCCCccEEEEcC
Q 023482 214 SSSGFAKVVANI 225 (281)
Q Consensus 214 ~~~~~d~Vi~n~ 225 (281)
..+..|++|.|.
T Consensus 89 ~~g~id~lv~nA 100 (252)
T 3f1l_A 89 NYPRLDGVLHNA 100 (252)
T ss_dssp HCSCCSEEEECC
T ss_pred hCCCCCEEEECC
Confidence 346789999874
No 408
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=92.48 E-value=0.54 Score=40.31 Aligned_cols=83 Identities=17% Similarity=0.208 Sum_probs=55.9
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeC-CHHHHHHHHHHhcCC--CCeEEEEcCccccccccchhhHHHhhcC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEK-DQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~-s~~~l~~a~~~~~~~--~~v~~~~gD~~~~~~~d~~~d~v~~~~~ 214 (281)
.++++|=.|++.|. ++..|++.|++|+.++. +++.++...+.+... +++.++.+|+.+...-+..++.+. ..
T Consensus 24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~--~~ 101 (281)
T 3v2h_A 24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVA--DR 101 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHH--HH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHH--HH
Confidence 46789999976554 44455566899999998 677776666655543 488999999987543333333322 23
Q ss_pred CCCccEEEEcC
Q 023482 215 SSGFAKVVANI 225 (281)
Q Consensus 215 ~~~~d~Vi~n~ 225 (281)
.+..|++|.|.
T Consensus 102 ~g~iD~lv~nA 112 (281)
T 3v2h_A 102 FGGADILVNNA 112 (281)
T ss_dssp TSSCSEEEECC
T ss_pred CCCCCEEEECC
Confidence 46789999874
No 409
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=92.48 E-value=0.51 Score=39.76 Aligned_cols=82 Identities=15% Similarity=0.199 Sum_probs=52.6
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC--C-CeEEEEcCccccccccchhhHHHhhcC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI--D-QLKVLQEDFVKCHIRSHMLSLFERRKS 214 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~--~-~v~~~~gD~~~~~~~d~~~d~v~~~~~ 214 (281)
.+++||=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+... + ++.++.+|+.+..--+..++.+. ..
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~--~~ 83 (260)
T 2z1n_A 6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKAR--DL 83 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH--HT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHH--Hh
Confidence 46788888866543 33444556899999999988776665544321 3 78899999887543222233221 22
Q ss_pred CCCccEEEEcC
Q 023482 215 SSGFAKVVANI 225 (281)
Q Consensus 215 ~~~~d~Vi~n~ 225 (281)
.+ .|++|.|.
T Consensus 84 ~g-id~lv~~A 93 (260)
T 2z1n_A 84 GG-ADILVYST 93 (260)
T ss_dssp TC-CSEEEECC
T ss_pred cC-CCEEEECC
Confidence 24 89999874
No 410
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=92.47 E-value=0.42 Score=40.68 Aligned_cols=81 Identities=15% Similarity=0.204 Sum_probs=55.5
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
.+++||=.|++.|. ++..|++.|++|+.++.+++.++.+.+... .++.++.+|+.+....+..++.+. ...+.
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~--~~~g~ 101 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLG--KDVFVFSANLSDRKSIKQLAEVAE--REMEG 101 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--SSEEEEECCTTSHHHHHHHHHHHH--HHHTS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CceEEEEeecCCHHHHHHHHHHHH--HHcCC
Confidence 56789988876553 444555668999999999988877665543 478999999987543333333322 22357
Q ss_pred ccEEEEcC
Q 023482 218 FAKVVANI 225 (281)
Q Consensus 218 ~d~Vi~n~ 225 (281)
.|++|.|.
T Consensus 102 iD~lvnnA 109 (266)
T 3grp_A 102 IDILVNNA 109 (266)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999874
No 411
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=92.47 E-value=0.34 Score=40.94 Aligned_cols=83 Identities=10% Similarity=0.088 Sum_probs=55.2
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEE-eCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAI-EKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gv-D~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
.++++|=.|++.|. ++..|++.|++|+.+ +.+++..+.+.+.+... .++.++.+|+.+..--+..++.+. ...
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~--~~~ 84 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAA--DKF 84 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHH--HHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH--HHh
Confidence 56789988877654 445555668999988 67777666666655544 488999999987543333333322 223
Q ss_pred CCccEEEEcC
Q 023482 216 SGFAKVVANI 225 (281)
Q Consensus 216 ~~~d~Vi~n~ 225 (281)
+..|++|.|.
T Consensus 85 g~id~lv~nA 94 (259)
T 3edm_A 85 GEIHGLVHVA 94 (259)
T ss_dssp CSEEEEEECC
T ss_pred CCCCEEEECC
Confidence 5789999874
No 412
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=92.44 E-value=0.44 Score=41.03 Aligned_cols=82 Identities=10% Similarity=0.153 Sum_probs=53.5
Q ss_pred CCCEEEEEcCCccHHHHHH----HHcCCEEEEEeCCHHHHHHHHHHhcC------CCCeEEEEcCccccccccchhhHHH
Q 023482 141 EGDIVLEIGPGTGSLTNVL----LNAGATVLAIEKDQHMVGLVRERFAS------IDQLKVLQEDFVKCHIRSHMLSLFE 210 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~l----a~~~~~v~gvD~s~~~l~~a~~~~~~------~~~v~~~~gD~~~~~~~d~~~d~v~ 210 (281)
.+++||=.|++ |.++..+ ++.|++|+.++.+++.++.+.+.+.. ..++.++.+|+.+...-...++.+.
T Consensus 17 ~~k~vlVTGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 95 (303)
T 1yxm_A 17 QGQVAIVTGGA-TGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 95 (303)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence 46789988865 5555544 44588999999998877766555432 2479999999987543222232221
Q ss_pred hhcCCCCccEEEEcC
Q 023482 211 RRKSSSGFAKVVANI 225 (281)
Q Consensus 211 ~~~~~~~~d~Vi~n~ 225 (281)
...+..|+||.|.
T Consensus 96 --~~~g~id~li~~A 108 (303)
T 1yxm_A 96 --DTFGKINFLVNNG 108 (303)
T ss_dssp --HHHSCCCEEEECC
T ss_pred --HHcCCCCEEEECC
Confidence 1225689999874
No 413
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=92.41 E-value=0.19 Score=43.18 Aligned_cols=83 Identities=17% Similarity=0.239 Sum_probs=53.9
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-C-CeEEEEcCccccccccchhhHHHhhcCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-D-QLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~-~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
.++++|=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+... + .+.++.+|+.+..--+..++.+. ...
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~--~~~ 109 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVR--AEF 109 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH--HHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHH--HHc
Confidence 56788888876543 34445556899999999998887766555322 2 45899999987653333333332 223
Q ss_pred CCccEEEEcC
Q 023482 216 SGFAKVVANI 225 (281)
Q Consensus 216 ~~~d~Vi~n~ 225 (281)
+..|++|.|.
T Consensus 110 g~iD~lvnnA 119 (281)
T 4dry_A 110 ARLDLLVNNA 119 (281)
T ss_dssp SCCSEEEECC
T ss_pred CCCCEEEECC
Confidence 6789999874
No 414
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=92.39 E-value=0.33 Score=40.48 Aligned_cols=82 Identities=15% Similarity=0.157 Sum_probs=52.7
Q ss_pred CCCEEEEEcCCccHHHHHHHH----cCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCC
Q 023482 141 EGDIVLEIGPGTGSLTNVLLN----AGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~la~----~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
.+++||=.|+ +|.++..+++ .|.+|++++.+++.++...+.+... +++.++.+|+.+...-...++.+. ...
T Consensus 10 ~~~~vlVtGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~--~~~ 86 (255)
T 1fmc_A 10 DGKCAIITGA-GAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAI--SKL 86 (255)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH--HHH
T ss_pred CCCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHH--Hhc
Confidence 4578887775 4555555544 4889999999988776655554432 478899999887542222222221 122
Q ss_pred CCccEEEEcC
Q 023482 216 SGFAKVVANI 225 (281)
Q Consensus 216 ~~~d~Vi~n~ 225 (281)
+..|+||.|.
T Consensus 87 ~~~d~vi~~A 96 (255)
T 1fmc_A 87 GKVDILVNNA 96 (255)
T ss_dssp SSCCEEEECC
T ss_pred CCCCEEEECC
Confidence 4689999874
No 415
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=92.38 E-value=0.38 Score=40.49 Aligned_cols=82 Identities=12% Similarity=0.139 Sum_probs=51.7
Q ss_pred CCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHH--HHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCC
Q 023482 142 GDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHM--VGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 142 ~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~--l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
++++|=.|++.|. ++..|++.|++|+.++.+++. ++.+.+.+... .++.++.+|+.+...-+..++.+. ...
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~--~~~ 79 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAA--EKL 79 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH--HHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH--HHh
Confidence 4578888865443 334445568999999998776 55555555433 478999999887543222233221 123
Q ss_pred CCccEEEEcC
Q 023482 216 SGFAKVVANI 225 (281)
Q Consensus 216 ~~~d~Vi~n~ 225 (281)
+..|++|.|.
T Consensus 80 g~iD~lv~nA 89 (258)
T 3a28_C 80 GGFDVLVNNA 89 (258)
T ss_dssp TCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 5789999874
No 416
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=92.36 E-value=0.39 Score=40.15 Aligned_cols=83 Identities=16% Similarity=0.209 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeC-CHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEK-DQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~-s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
.++++|=.|++.|. ++..|++.|++|+.++. +++.++.+.+.+... .++.++.+|+.+...-+..++.+. ...
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~--~~~ 80 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTV--DVF 80 (246)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH--HHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH--HHc
Confidence 35678877765442 33444456899999999 887776655554432 478899999887543222333221 122
Q ss_pred CCccEEEEcC
Q 023482 216 SGFAKVVANI 225 (281)
Q Consensus 216 ~~~d~Vi~n~ 225 (281)
+..|++|.|.
T Consensus 81 g~id~lv~nA 90 (246)
T 2uvd_A 81 GQVDILVNNA 90 (246)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 5689999874
No 417
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=92.35 E-value=0.38 Score=42.43 Aligned_cols=50 Identities=24% Similarity=0.295 Sum_probs=41.4
Q ss_pred HHHHhcCCCCCEEEEEcCCc-cHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH
Q 023482 133 LAAAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GATVLAIEKDQHMVGLVRER 182 (281)
Q Consensus 133 l~~~l~~~~~~~VLDiGcG~-G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~ 182 (281)
.+....+.++++||-+|+|. |.++..+++. |++|+++|.+++-++.+++.
T Consensus 158 ~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l 209 (340)
T 3s2e_A 158 GLKVTDTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRL 209 (340)
T ss_dssp HHHTTTCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT
T ss_pred HHHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHc
Confidence 34555677899999999975 8888888886 88999999999999988763
No 418
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=92.35 E-value=0.54 Score=40.20 Aligned_cols=82 Identities=17% Similarity=0.194 Sum_probs=53.9
Q ss_pred CCCEEEEEcCCccHHHHHHHH----cCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCC
Q 023482 141 EGDIVLEIGPGTGSLTNVLLN----AGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~la~----~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
.+++||=.|++ |.++..++. .|.+|+.++.+++.++.+.+.+... .++.++.+|+.+...-+..++.+. ...
T Consensus 43 ~~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~--~~~ 119 (285)
T 2c07_A 43 ENKVALVTGAG-RGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKIL--TEH 119 (285)
T ss_dssp SSCEEEEESTT-SHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH--HHC
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHH--Hhc
Confidence 45688888865 455555544 4789999999988777666655543 378999999887543222222221 223
Q ss_pred CCccEEEEcC
Q 023482 216 SGFAKVVANI 225 (281)
Q Consensus 216 ~~~d~Vi~n~ 225 (281)
+..|+||.|.
T Consensus 120 ~~id~li~~A 129 (285)
T 2c07_A 120 KNVDILVNNA 129 (285)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 5689999874
No 419
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=92.32 E-value=0.57 Score=40.21 Aligned_cols=82 Identities=20% Similarity=0.250 Sum_probs=53.3
Q ss_pred CCCEEEEEcCCccHHHHH----HHHcCCEEEEEeCCHHHHHHHHHHhcC--CCCeEEEEcCccccccccchhhHHHhhcC
Q 023482 141 EGDIVLEIGPGTGSLTNV----LLNAGATVLAIEKDQHMVGLVRERFAS--IDQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~----la~~~~~v~gvD~s~~~l~~a~~~~~~--~~~v~~~~gD~~~~~~~d~~~d~v~~~~~ 214 (281)
.+++||=.|++. .++.. |++.|++|++++.+++.++.+.+.+.. ..++.++.+|+.+...-...++.+. ..
T Consensus 25 ~~k~vlITGasg-giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~--~~ 101 (302)
T 1w6u_A 25 QGKVAFITGGGT-GLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI--KV 101 (302)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH--HH
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHH--HH
Confidence 467888888654 44444 445588999999998877665554432 2479999999987543222222221 23
Q ss_pred CCCccEEEEcC
Q 023482 215 SSGFAKVVANI 225 (281)
Q Consensus 215 ~~~~d~Vi~n~ 225 (281)
.+..|++|.|.
T Consensus 102 ~g~id~li~~A 112 (302)
T 1w6u_A 102 AGHPNIVINNA 112 (302)
T ss_dssp TCSCSEEEECC
T ss_pred cCCCCEEEECC
Confidence 35789999874
No 420
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=92.32 E-value=0.48 Score=39.48 Aligned_cols=78 Identities=15% Similarity=0.240 Sum_probs=54.0
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
++++||=.|++.|. ++..|++.|++|+.++.+++.++...+.+. .++.++.+|+.+.... ..++ ...+.
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~---~~~~---~~~~~ 84 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK--DNYTIEVCNLANKEEC---SNLI---SKTSN 84 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--SSEEEEECCTTSHHHH---HHHH---HTCSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc--cCccEEEcCCCCHHHH---HHHH---HhcCC
Confidence 67789988876553 344455568999999999998887776664 3788999998764321 1222 22356
Q ss_pred ccEEEEcCC
Q 023482 218 FAKVVANIP 226 (281)
Q Consensus 218 ~d~Vi~n~P 226 (281)
.|++|.|.-
T Consensus 85 id~li~~Ag 93 (249)
T 3f9i_A 85 LDILVCNAG 93 (249)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 899998753
No 421
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=92.32 E-value=0.76 Score=40.46 Aligned_cols=100 Identities=16% Similarity=0.222 Sum_probs=59.5
Q ss_pred HHHHhcCCCCCEEEEEcCC-ccHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHH
Q 023482 133 LAAAAAVQEGDIVLEIGPG-TGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFE 210 (281)
Q Consensus 133 l~~~l~~~~~~~VLDiGcG-~G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~ 210 (281)
.+....+.++++||-+|+| .|..+..+++. |++|+++|.+++-++.+++ +.. . .++ |..+-++ .+.+.
T Consensus 156 ~l~~~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lGa--~-~~~--d~~~~~~----~~~~~ 225 (339)
T 1rjw_A 156 ALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE-LGA--D-LVV--NPLKEDA----AKFMK 225 (339)
T ss_dssp HHHHHTCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTC--S-EEE--CTTTSCH----HHHHH
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-CCC--C-EEe--cCCCccH----HHHHH
Confidence 3344577789999999986 47777777765 8899999999999988875 221 1 122 3222111 11121
Q ss_pred hhcCCCCccEEEEcCCCcccHHHHHHhccCCCCc
Q 023482 211 RRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIF 244 (281)
Q Consensus 211 ~~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~ 244 (281)
... +.+|+||.+..-........++++.++.+
T Consensus 226 ~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~ 257 (339)
T 1rjw_A 226 EKV--GGVHAAVVTAVSKPAFQSAYNSIRRGGAC 257 (339)
T ss_dssp HHH--SSEEEEEESSCCHHHHHHHHHHEEEEEEE
T ss_pred HHh--CCCCEEEECCCCHHHHHHHHHHhhcCCEE
Confidence 112 46899998766422223333455554443
No 422
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=92.29 E-value=0.46 Score=40.33 Aligned_cols=81 Identities=11% Similarity=0.208 Sum_probs=53.0
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
.++++|=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+. .++.++.+|+.+...-+..++.+. ...+.
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~--~~~g~ 80 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE--AEAIAVVADVSDPKAVEAVFAEAL--EEFGR 80 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC--SSEEEEECCTTSHHHHHHHHHHHH--HHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CceEEEEcCCCCHHHHHHHHHHHH--HHcCC
Confidence 45788888876543 344445568999999999887776655443 478899999887543222222221 22357
Q ss_pred ccEEEEcC
Q 023482 218 FAKVVANI 225 (281)
Q Consensus 218 ~d~Vi~n~ 225 (281)
.|++|.|.
T Consensus 81 iD~lvnnA 88 (263)
T 2a4k_A 81 LHGVAHFA 88 (263)
T ss_dssp CCEEEEGG
T ss_pred CcEEEECC
Confidence 89999874
No 423
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=92.28 E-value=0.61 Score=41.74 Aligned_cols=101 Identities=20% Similarity=0.210 Sum_probs=60.8
Q ss_pred HHHhcCCCCCEEEEEcCCc-cHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHH
Q 023482 134 AAAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GA-TVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFE 210 (281)
Q Consensus 134 ~~~l~~~~~~~VLDiGcG~-G~~t~~la~~-~~-~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~ 210 (281)
+....+.++++||=+|+|. |.++..+++. |+ +|+++|.+++-.+.+++.-. . .++ |..+-++ .+.+.
T Consensus 175 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa---~-~vi--~~~~~~~----~~~i~ 244 (370)
T 4ej6_A 175 VDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGA---T-ATV--DPSAGDV----VEAIA 244 (370)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTC---S-EEE--CTTSSCH----HHHHH
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC---C-EEE--CCCCcCH----HHHHH
Confidence 4566788999999999875 7777777776 77 99999999999998876422 1 122 2111111 11111
Q ss_pred hh--cCCCCccEEEEcCCCcccHHHHHHhccCCCCc
Q 023482 211 RR--KSSSGFAKVVANIPFNISTDVIKQLLPMGDIF 244 (281)
Q Consensus 211 ~~--~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~ 244 (281)
.. ...+.+|+||-...-........+++++++.+
T Consensus 245 ~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~v 280 (370)
T 4ej6_A 245 GPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTV 280 (370)
T ss_dssp STTSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEE
T ss_pred hhhhccCCCCCEEEECCCCHHHHHHHHHHhccCCEE
Confidence 10 11247899998755332333344556555544
No 424
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=92.25 E-value=0.5 Score=40.19 Aligned_cols=80 Identities=20% Similarity=0.258 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
.++++|=.|++.|. ++..|++.|++|+.++.+++.++.+.+... ++.++.+|+.+..--...++.+. ...+.
T Consensus 8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~--~~~g~ 82 (270)
T 1yde_A 8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP---GAVFILCDVTQEDDVKTLVSETI--RRFGR 82 (270)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT---TEEEEECCTTSHHHHHHHHHHHH--HHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---CCeEEEcCCCCHHHHHHHHHHHH--HHcCC
Confidence 46788988866543 344445568999999999887766655443 58889999887543222333221 22357
Q ss_pred ccEEEEcC
Q 023482 218 FAKVVANI 225 (281)
Q Consensus 218 ~d~Vi~n~ 225 (281)
.|++|.|.
T Consensus 83 iD~lv~nA 90 (270)
T 1yde_A 83 LDCVVNNA 90 (270)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999874
No 425
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=92.24 E-value=0.43 Score=41.16 Aligned_cols=83 Identities=14% Similarity=0.167 Sum_probs=53.5
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHH-HHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQH-MVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~-~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
.+++||=.|.+.|. ++..|++.|++|+.++.++. ..+.+.+..... .++.++.+|+.+..--...++.+. ...
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~--~~~ 123 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETV--RQL 123 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHH--HHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH--HHc
Confidence 56789999976553 44455556899999999865 344444444443 389999999987543333333222 223
Q ss_pred CCccEEEEcC
Q 023482 216 SGFAKVVANI 225 (281)
Q Consensus 216 ~~~d~Vi~n~ 225 (281)
+..|++|.|.
T Consensus 124 g~iD~lvnnA 133 (291)
T 3ijr_A 124 GSLNILVNNV 133 (291)
T ss_dssp SSCCEEEECC
T ss_pred CCCCEEEECC
Confidence 5789999873
No 426
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=92.20 E-value=0.43 Score=40.76 Aligned_cols=83 Identities=11% Similarity=0.106 Sum_probs=55.3
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC--CCCeEEEEcCccccccccchhhHHHhhcCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFAS--IDQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~--~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
.++++|=.|++.|. ++..|++.|++|+.++.+.+.++.+...+.. ..++.++.+|+.+..--...++.+. ...
T Consensus 26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~--~~~ 103 (277)
T 4fc7_A 26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQAL--KEF 103 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH--HHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH--HHc
Confidence 56789999976553 3444555688999999998877666554432 2489999999987543333333222 223
Q ss_pred CCccEEEEcC
Q 023482 216 SGFAKVVANI 225 (281)
Q Consensus 216 ~~~d~Vi~n~ 225 (281)
+..|++|.|.
T Consensus 104 g~id~lv~nA 113 (277)
T 4fc7_A 104 GRIDILINCA 113 (277)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 5789999874
No 427
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=92.18 E-value=0.49 Score=42.05 Aligned_cols=60 Identities=18% Similarity=0.142 Sum_probs=44.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCC-----------------------CCeEEEEcC
Q 023482 141 EGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI-----------------------DQLKVLQED 195 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~-----------------------~~v~~~~gD 195 (281)
+...|+.+|||.......+... +..++-||. |+.++.-++.+... ++.+++-+|
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 4568999999999999999875 345666665 77777666655432 478999999
Q ss_pred cccccc
Q 023482 196 FVKCHI 201 (281)
Q Consensus 196 ~~~~~~ 201 (281)
+.+.+.
T Consensus 176 L~d~~w 181 (334)
T 1rjd_A 176 LNDITE 181 (334)
T ss_dssp TTCHHH
T ss_pred CCCcHH
Confidence 988643
No 428
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=92.16 E-value=0.51 Score=40.66 Aligned_cols=60 Identities=12% Similarity=0.101 Sum_probs=42.9
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEe-CCHHHHHHHHHHhc-C-CCCeEEEEcCccccc
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIE-KDQHMVGLVRERFA-S-IDQLKVLQEDFVKCH 200 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD-~s~~~l~~a~~~~~-~-~~~v~~~~gD~~~~~ 200 (281)
.++++|=.|++.|. ++..|++.|++|+.++ .+++.++.+.+.+. . ..++.++.+|+.+..
T Consensus 8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~ 73 (291)
T 1e7w_A 8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVA 73 (291)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcc
Confidence 46788888866553 3344455689999999 99888776665553 2 248999999998765
No 429
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=92.15 E-value=0.49 Score=39.92 Aligned_cols=84 Identities=15% Similarity=0.175 Sum_probs=56.5
Q ss_pred CCCEEEEEcCC----ccH-HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCC--CeEEEEcCccccccccchhhHHHhhc
Q 023482 141 EGDIVLEIGPG----TGS-LTNVLLNAGATVLAIEKDQHMVGLVRERFASID--QLKVLQEDFVKCHIRSHMLSLFERRK 213 (281)
Q Consensus 141 ~~~~VLDiGcG----~G~-~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~--~v~~~~gD~~~~~~~d~~~d~v~~~~ 213 (281)
.++++|=.|++ .|. ++..|++.|++|+.++.++...+.+.+.....+ ++.++.+|+.+...-+..++.+. .
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~--~ 83 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIK--E 83 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH--H
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH--H
Confidence 46789999965 343 556667779999999998766665555544332 79999999987654333343332 2
Q ss_pred CCCCccEEEEcCC
Q 023482 214 SSSGFAKVVANIP 226 (281)
Q Consensus 214 ~~~~~d~Vi~n~P 226 (281)
..+..|++|.|.-
T Consensus 84 ~~g~id~li~~Ag 96 (266)
T 3oig_A 84 QVGVIHGIAHCIA 96 (266)
T ss_dssp HHSCCCEEEECCC
T ss_pred HhCCeeEEEEccc
Confidence 2357899998753
No 430
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=92.12 E-value=0.39 Score=40.23 Aligned_cols=79 Identities=18% Similarity=0.151 Sum_probs=51.3
Q ss_pred CCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCCc
Q 023482 142 GDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGF 218 (281)
Q Consensus 142 ~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~ 218 (281)
+++||=.|.+.|. ++..|++.|++|+.+|.+++..+...+.. +++.++.+|+.+....+..++.+. ...+..
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~--~~~g~i 76 (247)
T 3dii_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKER---PNLFYFHGDVADPLTLKKFVEYAM--EKLQRI 76 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTC---TTEEEEECCTTSHHHHHHHHHHHH--HHHSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---ccCCeEEeeCCCHHHHHHHHHHHH--HHcCCC
Confidence 3577878866553 44455556899999999988766554433 467899999887543333333221 223578
Q ss_pred cEEEEcC
Q 023482 219 AKVVANI 225 (281)
Q Consensus 219 d~Vi~n~ 225 (281)
|++|.|.
T Consensus 77 d~lv~nA 83 (247)
T 3dii_A 77 DVLVNNA 83 (247)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 9999874
No 431
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=92.12 E-value=0.55 Score=38.88 Aligned_cols=82 Identities=16% Similarity=0.193 Sum_probs=52.3
Q ss_pred CCCEEEEEcCCccHHHHHH----HHcCCEEEEEeCCHHHHHHHHHHhcC--CCCeEEEEcCccccccccchhhHHHhhcC
Q 023482 141 EGDIVLEIGPGTGSLTNVL----LNAGATVLAIEKDQHMVGLVRERFAS--IDQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~l----a~~~~~v~gvD~s~~~l~~a~~~~~~--~~~v~~~~gD~~~~~~~d~~~d~v~~~~~ 214 (281)
.+++||=.|++ |.++..+ ++.|.+|+.++.+++.++.....+.. ..++.++.+|+.+...-...++.+. ..
T Consensus 6 ~~~~vlVtGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~--~~ 82 (248)
T 2pnf_A 6 QGKVSLVTGST-RGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIY--NL 82 (248)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH--HH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHH--Hh
Confidence 45678877764 4445444 44588999999998877665554432 2478899999877532222222221 22
Q ss_pred CCCccEEEEcC
Q 023482 215 SSGFAKVVANI 225 (281)
Q Consensus 215 ~~~~d~Vi~n~ 225 (281)
.+..|+||.|.
T Consensus 83 ~~~~d~vi~~A 93 (248)
T 2pnf_A 83 VDGIDILVNNA 93 (248)
T ss_dssp SSCCSEEEECC
T ss_pred cCCCCEEEECC
Confidence 35789999874
No 432
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=92.10 E-value=0.28 Score=42.07 Aligned_cols=81 Identities=15% Similarity=0.258 Sum_probs=52.2
Q ss_pred CCCEEEEEcCCccHHHHH----HHHcCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEcCccccccccchhhHHHhhcC
Q 023482 141 EGDIVLEIGPGTGSLTNV----LLNAGATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~----la~~~~~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~gD~~~~~~~d~~~d~v~~~~~ 214 (281)
.+++||=.|++.| ++.. +++.|.+|++++.+++.++.+...+... .++.++.+|+.+....+..++.+. ..
T Consensus 27 ~~k~vlITGasgg-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~--~~ 103 (286)
T 1xu9_A 27 QGKKVIVTGASKG-IGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAG--KL 103 (286)
T ss_dssp TTCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHH--HH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHH--HH
Confidence 4678998886544 4444 4455889999999998877665544322 268899999887543222222221 12
Q ss_pred CCCccEEEEc
Q 023482 215 SSGFAKVVAN 224 (281)
Q Consensus 215 ~~~~d~Vi~n 224 (281)
.+..|++|.|
T Consensus 104 ~g~iD~li~n 113 (286)
T 1xu9_A 104 MGGLDMLILN 113 (286)
T ss_dssp HTSCSEEEEC
T ss_pred cCCCCEEEEC
Confidence 2578999977
No 433
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=92.09 E-value=0.36 Score=41.84 Aligned_cols=83 Identities=12% Similarity=0.202 Sum_probs=53.6
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC-C---CeEEEEcCccccccccchhhHHHhhc
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-D---QLKVLQEDFVKCHIRSHMLSLFERRK 213 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~-~---~v~~~~gD~~~~~~~d~~~d~v~~~~ 213 (281)
.++++|=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+... . ++.++.+|+.+.......++.+. .
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~--~ 102 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL--A 102 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH--H
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHH--H
Confidence 46788888865543 33444556899999999988777665554332 2 68899999887543222232221 1
Q ss_pred CCCCccEEEEcC
Q 023482 214 SSSGFAKVVANI 225 (281)
Q Consensus 214 ~~~~~d~Vi~n~ 225 (281)
..+..|++|.|.
T Consensus 103 ~~g~iD~lvnnA 114 (297)
T 1xhl_A 103 KFGKIDILVNNA 114 (297)
T ss_dssp HHSCCCEEEECC
T ss_pred hcCCCCEEEECC
Confidence 235789999874
No 434
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=92.01 E-value=0.55 Score=38.98 Aligned_cols=81 Identities=11% Similarity=0.121 Sum_probs=51.7
Q ss_pred CCEEEEEcCCccHHHHHH----HHcCCEEEEEeCCHHHHHHHHHHh-cCC-CCeEEEEcCccccccccchhhHHHhhcCC
Q 023482 142 GDIVLEIGPGTGSLTNVL----LNAGATVLAIEKDQHMVGLVRERF-ASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 142 ~~~VLDiGcG~G~~t~~l----a~~~~~v~gvD~s~~~l~~a~~~~-~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
+++||=.|++ |.++..+ ++.|++|+.++.++..++.+.+.+ ... .++.++.+|+.+...-...++.+. ...
T Consensus 2 ~k~vlItGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~--~~~ 78 (250)
T 2cfc_A 2 SRVAIVTGAS-SGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATM--EQF 78 (250)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHH--HHH
T ss_pred CCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH--HHh
Confidence 3577877855 4445444 445889999999988777666555 222 378999999887543222222221 122
Q ss_pred CCccEEEEcC
Q 023482 216 SGFAKVVANI 225 (281)
Q Consensus 216 ~~~d~Vi~n~ 225 (281)
+..|++|.|.
T Consensus 79 ~~id~li~~A 88 (250)
T 2cfc_A 79 GAIDVLVNNA 88 (250)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 4689999874
No 435
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=92.01 E-value=0.44 Score=40.51 Aligned_cols=83 Identities=13% Similarity=0.155 Sum_probs=53.2
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHh---cCC-CCeEEEEcCccccccccchhhHHHhhc
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERF---ASI-DQLKVLQEDFVKCHIRSHMLSLFERRK 213 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~---~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~ 213 (281)
.+++||=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+ ... .++.++.+|+.+....+..++.+. .
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~--~ 82 (278)
T 1spx_A 5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL--G 82 (278)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH--H
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHH--H
Confidence 45678888865442 33444556899999999988877666555 222 378899999887543222232221 1
Q ss_pred CCCCccEEEEcC
Q 023482 214 SSSGFAKVVANI 225 (281)
Q Consensus 214 ~~~~~d~Vi~n~ 225 (281)
..+..|++|.|.
T Consensus 83 ~~g~id~lv~~A 94 (278)
T 1spx_A 83 KFGKLDILVNNA 94 (278)
T ss_dssp HHSCCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 225789999874
No 436
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=91.98 E-value=0.58 Score=39.34 Aligned_cols=83 Identities=11% Similarity=0.106 Sum_probs=52.0
Q ss_pred CCCEEEEEcCCccHHHHHH----HHcCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCC
Q 023482 141 EGDIVLEIGPGTGSLTNVL----LNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~l----a~~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
.+++||=.|++ |.++..+ ++.|++|+.++.++..++.....+... .++.++.+|+.+.......++.+.. ...
T Consensus 13 ~~k~vlITGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~ 90 (266)
T 1xq1_A 13 KAKTVLVTGGT-KGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS-MFG 90 (266)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH-HHT
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHH-HhC
Confidence 45688877764 4445444 445889999999988776665554432 3788999998765322222222211 111
Q ss_pred CCccEEEEcC
Q 023482 216 SGFAKVVANI 225 (281)
Q Consensus 216 ~~~d~Vi~n~ 225 (281)
+..|+||.|.
T Consensus 91 ~~id~li~~A 100 (266)
T 1xq1_A 91 GKLDILINNL 100 (266)
T ss_dssp TCCSEEEEEC
T ss_pred CCCcEEEECC
Confidence 5689999874
No 437
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=91.90 E-value=0.48 Score=39.12 Aligned_cols=82 Identities=12% Similarity=0.075 Sum_probs=52.3
Q ss_pred CCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhc--CCCCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 142 GDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFA--SIDQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 142 ~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~--~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
++++|=.|++.|. ++..+++.|++|+.++.+++-++.+.+.+. ...++.++.+|+.+..--...++.+. ...+
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~--~~~g 79 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVL--ERFG 79 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HH--HHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHH--HhcC
Confidence 4578888865443 344445568999999999888777665543 12489999999987542222222221 1225
Q ss_pred CccEEEEcC
Q 023482 217 GFAKVVANI 225 (281)
Q Consensus 217 ~~d~Vi~n~ 225 (281)
..|++|.|.
T Consensus 80 ~id~li~~A 88 (235)
T 3l77_A 80 DVDVVVANA 88 (235)
T ss_dssp SCSEEEECC
T ss_pred CCCEEEECC
Confidence 689999874
No 438
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=91.87 E-value=0.53 Score=39.69 Aligned_cols=81 Identities=21% Similarity=0.191 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
.+++||=.|++.|. ++..|++.|++|+.++.+++.++...+.+. .++.++.+|+.+..--+..++.+. ...+.
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~d~~~v~~~~~~~~--~~~g~ 86 (263)
T 3ak4_A 11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE--NGGFAVEVDVTKRASVDAAMQKAI--DALGG 86 (263)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT--TCCEEEECCTTCHHHHHHHHHHHH--HHHTC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh--cCCeEEEEeCCCHHHHHHHHHHHH--HHcCC
Confidence 46789988865443 334444568999999999887766554443 267888999877432222222221 12256
Q ss_pred ccEEEEcC
Q 023482 218 FAKVVANI 225 (281)
Q Consensus 218 ~d~Vi~n~ 225 (281)
.|++|.|.
T Consensus 87 iD~lv~~A 94 (263)
T 3ak4_A 87 FDLLCANA 94 (263)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999874
No 439
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=91.82 E-value=0.53 Score=39.75 Aligned_cols=83 Identities=16% Similarity=0.174 Sum_probs=52.9
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCccccccccchhhHHHhhcC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~~~~~~d~~~d~v~~~~~ 214 (281)
.+++||=.|++.|. ++..|++.|++|+.++.+++..+.+.+.+... .++.++.+|+.+..--...++.+. ..
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~--~~ 83 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVV--DH 83 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHH--HH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHH--HH
Confidence 46788888865443 33444556899999999988776655555431 368899999887532222222221 12
Q ss_pred CCCccEEEEcC
Q 023482 215 SSGFAKVVANI 225 (281)
Q Consensus 215 ~~~~d~Vi~n~ 225 (281)
.+..|++|.|.
T Consensus 84 ~g~id~lv~~A 94 (267)
T 2gdz_A 84 FGRLDILVNNA 94 (267)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 25689999875
No 440
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=91.81 E-value=0.26 Score=42.17 Aligned_cols=83 Identities=10% Similarity=0.073 Sum_probs=56.3
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
+++++|=-|.+.|. .+..+++.|++|+.++.+++..+.+.+..+..+++.++.+|+.+..-....++.+. ...+.
T Consensus 6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~--~~~G~ 83 (258)
T 4gkb_A 6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTI--ATFGR 83 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHH--HHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHH--HHhCC
Confidence 57889998988775 45666777999999999876555444433334588999999887543333333322 33477
Q ss_pred ccEEEEcC
Q 023482 218 FAKVVANI 225 (281)
Q Consensus 218 ~d~Vi~n~ 225 (281)
.|++|.|-
T Consensus 84 iDiLVNnA 91 (258)
T 4gkb_A 84 LDGLVNNA 91 (258)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999873
No 441
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=91.81 E-value=0.5 Score=40.08 Aligned_cols=82 Identities=10% Similarity=0.071 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCccHHHHH----HHHcCCEEEEEeC-CHHHHHHHHHHhcC--CCCeEEEEcCcccc----ccccchhhHH
Q 023482 141 EGDIVLEIGPGTGSLTNV----LLNAGATVLAIEK-DQHMVGLVRERFAS--IDQLKVLQEDFVKC----HIRSHMLSLF 209 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~----la~~~~~v~gvD~-s~~~l~~a~~~~~~--~~~v~~~~gD~~~~----~~~d~~~d~v 209 (281)
.++++|=.|++.| ++.. |++.|++|+.++. +++.++.+.+.+.. ..++.++.+|+.+. ...+..++.+
T Consensus 10 ~~k~~lVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 88 (276)
T 1mxh_A 10 ECPAAVITGGARR-IGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS 88 (276)
T ss_dssp -CCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence 4567887776544 4444 4455899999999 88877666555432 24789999999875 3222222222
Q ss_pred HhhcCCCCccEEEEcC
Q 023482 210 ERRKSSSGFAKVVANI 225 (281)
Q Consensus 210 ~~~~~~~~~d~Vi~n~ 225 (281)
. ...+..|++|.|.
T Consensus 89 ~--~~~g~id~lv~nA 102 (276)
T 1mxh_A 89 F--RAFGRCDVLVNNA 102 (276)
T ss_dssp H--HHHSCCCEEEECC
T ss_pred H--HhcCCCCEEEECC
Confidence 1 1235689999874
No 442
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=91.80 E-value=0.46 Score=40.35 Aligned_cols=83 Identities=14% Similarity=0.209 Sum_probs=52.7
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHh-cC-CCCeEEEEcCccccccccchhhHHHhhcCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERF-AS-IDQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~-~~-~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
.++++|=.|.+.|. ++..|++.|++|+.++.+++.++.+.+.+ .. ..++.++.+|+.+..--...++.+. ...
T Consensus 20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~--~~~ 97 (267)
T 1vl8_A 20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVK--EKF 97 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH--HHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH--HHc
Confidence 46788988866543 34444556899999999988776655444 21 2378889999887532222222221 122
Q ss_pred CCccEEEEcC
Q 023482 216 SGFAKVVANI 225 (281)
Q Consensus 216 ~~~d~Vi~n~ 225 (281)
+..|++|.|.
T Consensus 98 g~iD~lvnnA 107 (267)
T 1vl8_A 98 GKLDTVVNAA 107 (267)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 5789999874
No 443
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=91.76 E-value=0.57 Score=40.94 Aligned_cols=98 Identities=9% Similarity=0.108 Sum_probs=58.1
Q ss_pred HhcCCCCCEEEEEc--CCccHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhh
Q 023482 136 AAAVQEGDIVLEIG--PGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERR 212 (281)
Q Consensus 136 ~l~~~~~~~VLDiG--cG~G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~ 212 (281)
..++.++++||-.| .|.|..+..++.. |++|+++|.+++.++.+++. .. . .++ |..+..+ .+.+...
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~-g~--~-~~~--~~~~~~~----~~~~~~~ 204 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKA-GA--W-QVI--NYREEDL----VERLKEI 204 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH-TC--S-EEE--ETTTSCH----HHHHHHH
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc-CC--C-EEE--ECCCccH----HHHHHHH
Confidence 34667889999999 4567677666664 88999999999988888763 21 1 122 2222111 1111111
Q ss_pred cCCCCccEEEEcCCCcccHHHHHHhccCCCCc
Q 023482 213 KSSSGFAKVVANIPFNISTDVIKQLLPMGDIF 244 (281)
Q Consensus 213 ~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~ 244 (281)
.....+|++|.+.. ........++++.++.+
T Consensus 205 ~~~~~~D~vi~~~g-~~~~~~~~~~l~~~G~i 235 (327)
T 1qor_A 205 TGGKKVRVVYDSVG-RDTWERSLDCLQRRGLM 235 (327)
T ss_dssp TTTCCEEEEEECSC-GGGHHHHHHTEEEEEEE
T ss_pred hCCCCceEEEECCc-hHHHHHHHHHhcCCCEE
Confidence 22346899998876 33333344555555443
No 444
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=91.63 E-value=0.49 Score=39.68 Aligned_cols=82 Identities=13% Similarity=0.094 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCccHHHHH----HHH-cCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcC
Q 023482 141 EGDIVLEIGPGTGSLTNV----LLN-AGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~----la~-~~~~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~ 214 (281)
.+++||=.|+ +|.++.. |++ .|.+|+.++.++...+.+.+.+... .++.++.+|+.+...-...++.+. ..
T Consensus 3 ~~k~vlITGa-sggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~--~~ 79 (276)
T 1wma_A 3 GIHVALVTGG-NKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLR--KE 79 (276)
T ss_dssp CCCEEEESSC-SSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHH--HH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHH--Hh
Confidence 4567887775 4554544 455 6889999999988776665555432 478999999887542222222221 12
Q ss_pred CCCccEEEEcC
Q 023482 215 SSGFAKVVANI 225 (281)
Q Consensus 215 ~~~~d~Vi~n~ 225 (281)
.+..|+||.|.
T Consensus 80 ~g~id~li~~A 90 (276)
T 1wma_A 80 YGGLDVLVNNA 90 (276)
T ss_dssp HSSEEEEEECC
T ss_pred cCCCCEEEECC
Confidence 24689999864
No 445
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=91.54 E-value=0.51 Score=40.67 Aligned_cols=83 Identities=13% Similarity=0.157 Sum_probs=54.9
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCC---EEEEEeCCHHHHHHHHHHhcC---CCCeEEEEcCccccccccchhhHHHh
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGA---TVLAIEKDQHMVGLVRERFAS---IDQLKVLQEDFVKCHIRSHMLSLFER 211 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~---~v~gvD~s~~~l~~a~~~~~~---~~~v~~~~gD~~~~~~~d~~~d~v~~ 211 (281)
.++++|=.|++.|. ++..+++.|+ +|+.++.+++.++.+.+.+.. ..++.++.+|+.+..-.+..++.+.
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~- 110 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP- 110 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC-
T ss_pred CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH-
Confidence 56789999976553 3334444565 999999999888877666543 2378899999987543322222221
Q ss_pred hcCCCCccEEEEcC
Q 023482 212 RKSSSGFAKVVANI 225 (281)
Q Consensus 212 ~~~~~~~d~Vi~n~ 225 (281)
...+..|++|.|.
T Consensus 111 -~~~g~iD~lVnnA 123 (287)
T 3rku_A 111 -QEFKDIDILVNNA 123 (287)
T ss_dssp -GGGCSCCEEEECC
T ss_pred -HhcCCCCEEEECC
Confidence 2235789999874
No 446
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=91.53 E-value=0.62 Score=40.96 Aligned_cols=60 Identities=12% Similarity=0.101 Sum_probs=42.6
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEe-CCHHHHHHHHHHhc-C-CCCeEEEEcCccccc
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIE-KDQHMVGLVRERFA-S-IDQLKVLQEDFVKCH 200 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD-~s~~~l~~a~~~~~-~-~~~v~~~~gD~~~~~ 200 (281)
.+++||=.|++.|. ++..|++.|++|+.++ .+++.++.+.+.+. . ..++.++.+|+.+..
T Consensus 45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~ 110 (328)
T 2qhx_A 45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVA 110 (328)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCch
Confidence 46788887766543 3344455689999999 99888777665553 2 247999999998765
No 447
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=91.53 E-value=0.85 Score=40.71 Aligned_cols=101 Identities=11% Similarity=0.110 Sum_probs=60.4
Q ss_pred HHhcCCCCCEEEEEcCCc-cHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHh
Q 023482 135 AAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GA-TVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFER 211 (281)
Q Consensus 135 ~~l~~~~~~~VLDiGcG~-G~~t~~la~~-~~-~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~ 211 (281)
....+.++++||-+|+|. |.++..+++. |+ +|+++|.+++-++.+++. .. . .++ |..+.+ +...+.+..
T Consensus 186 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l-Ga--~-~vi--~~~~~~--~~~~~~~~~ 257 (374)
T 1cdo_A 186 NTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF-GA--T-DFV--NPNDHS--EPISQVLSK 257 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-TC--C-EEE--CGGGCS--SCHHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh-CC--c-eEE--eccccc--hhHHHHHHH
Confidence 345677899999999874 7777777775 77 899999999999888753 21 1 222 222100 011122221
Q ss_pred hcCCCCccEEEEcCCCcccHHHHHHhccCC-CCc
Q 023482 212 RKSSSGFAKVVANIPFNISTDVIKQLLPMG-DIF 244 (281)
Q Consensus 212 ~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~-~~~ 244 (281)
... +.+|+||-...-........++++++ +.+
T Consensus 258 ~~~-~g~D~vid~~g~~~~~~~~~~~l~~~~G~i 290 (374)
T 1cdo_A 258 MTN-GGVDFSLECVGNVGVMRNALESCLKGWGVS 290 (374)
T ss_dssp HHT-SCBSEEEECSCCHHHHHHHHHTBCTTTCEE
T ss_pred HhC-CCCCEEEECCCCHHHHHHHHHHhhcCCcEE
Confidence 122 47999998766433333444566666 654
No 448
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=91.53 E-value=0.54 Score=39.09 Aligned_cols=83 Identities=14% Similarity=0.250 Sum_probs=53.0
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEcCcccccc--ccchhhHHHhhc
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHI--RSHMLSLFERRK 213 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~--~~v~~~~gD~~~~~~--~d~~~d~v~~~~ 213 (281)
.++++|=.|++.|. ++..|++.|++|+.++.++..++.+.+.+... .++.++..|...... ....++.+. .
T Consensus 13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~--~ 90 (247)
T 3i1j_A 13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVE--H 90 (247)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHH--H
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHH--H
Confidence 56788988876553 34445556899999999999888777666533 367888888732221 111222221 2
Q ss_pred CCCCccEEEEcC
Q 023482 214 SSSGFAKVVANI 225 (281)
Q Consensus 214 ~~~~~d~Vi~n~ 225 (281)
..+..|++|.|.
T Consensus 91 ~~g~id~lv~nA 102 (247)
T 3i1j_A 91 EFGRLDGLLHNA 102 (247)
T ss_dssp HHSCCSEEEECC
T ss_pred hCCCCCEEEECC
Confidence 235789999874
No 449
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=91.49 E-value=0.49 Score=40.65 Aligned_cols=77 Identities=21% Similarity=0.219 Sum_probs=52.0
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
.+++||=.|++.|. ++..|++.|++|+.++.++...+.+.+.+. +++.++.+|+.+..--. .++ ..-+.
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~---~~~---~~~~~ 86 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMA--GQVEVRELDLQDLSSVR---RFA---DGVSG 86 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSS--SEEEEEECCTTCHHHHH---HHH---HTCCC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc--CCeeEEEcCCCCHHHHH---HHH---HhcCC
Confidence 56788988876543 344445568999999999988776655442 47899999988753211 122 12257
Q ss_pred ccEEEEcC
Q 023482 218 FAKVVANI 225 (281)
Q Consensus 218 ~d~Vi~n~ 225 (281)
.|++|.|.
T Consensus 87 iD~lv~nA 94 (291)
T 3rd5_A 87 ADVLINNA 94 (291)
T ss_dssp EEEEEECC
T ss_pred CCEEEECC
Confidence 89999874
No 450
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=91.41 E-value=0.54 Score=39.45 Aligned_cols=81 Identities=15% Similarity=0.248 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
.+++||=.|++.|. ++..|++.|++|+.++.+++.++...+.+. .++.++.+|+.+..--...++.+. ...+.
T Consensus 5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~--~~~g~ 80 (253)
T 1hxh_A 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG--ERSMFVRHDVSSEADWTLVMAAVQ--RRLGT 80 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC--TTEEEECCCTTCHHHHHHHHHHHH--HHHCS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC--CceEEEEccCCCHHHHHHHHHHHH--HHcCC
Confidence 45678888865442 334444568899999999887776655542 478899999887542222222221 12356
Q ss_pred ccEEEEcC
Q 023482 218 FAKVVANI 225 (281)
Q Consensus 218 ~d~Vi~n~ 225 (281)
.|++|.|.
T Consensus 81 id~lv~~A 88 (253)
T 1hxh_A 81 LNVLVNNA 88 (253)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999874
No 451
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=91.37 E-value=0.28 Score=43.95 Aligned_cols=88 Identities=17% Similarity=0.191 Sum_probs=60.1
Q ss_pred CEEEEEcCCccHHHHHHHH---cCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCCcc
Q 023482 143 DIVLEIGPGTGSLTNVLLN---AGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFA 219 (281)
Q Consensus 143 ~~VLDiGcG~G~~t~~la~---~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d 219 (281)
.+||=+|| |..+..+++ ...+|+..|++.+.++.++. .+..+..|+.+.. ...+.+ ...|
T Consensus 17 mkilvlGa--G~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~------~~~~~~~d~~d~~---~l~~~~------~~~D 79 (365)
T 3abi_A 17 MKVLILGA--GNIGRAIAWDLKDEFDVYIGDVNNENLEKVKE------FATPLKVDASNFD---KLVEVM------KEFE 79 (365)
T ss_dssp CEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHHHHHHTT------TSEEEECCTTCHH---HHHHHH------TTCS
T ss_pred cEEEEECC--CHHHHHHHHHHhcCCCeEEEEcCHHHHHHHhc------cCCcEEEecCCHH---HHHHHH------hCCC
Confidence 47999998 455554444 35699999999988876643 3455667765432 111222 4679
Q ss_pred EEEEcCCCcccHHHHHHhccCCCCcceE
Q 023482 220 KVVANIPFNISTDVIKQLLPMGDIFSEV 247 (281)
Q Consensus 220 ~Vi~n~P~~~~~~~~~~ll~~~~~~~~~ 247 (281)
+||+-.|+....++.+.+++.+..+-..
T Consensus 80 vVi~~~p~~~~~~v~~~~~~~g~~yvD~ 107 (365)
T 3abi_A 80 LVIGALPGFLGFKSIKAAIKSKVDMVDV 107 (365)
T ss_dssp EEEECCCGGGHHHHHHHHHHHTCEEEEC
T ss_pred EEEEecCCcccchHHHHHHhcCcceEee
Confidence 9999888888888999888877765443
No 452
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=91.37 E-value=0.62 Score=40.73 Aligned_cols=96 Identities=14% Similarity=0.080 Sum_probs=57.1
Q ss_pred hcCCCCCEEEEEc--CCccHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhc
Q 023482 137 AAVQEGDIVLEIG--PGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRK 213 (281)
Q Consensus 137 l~~~~~~~VLDiG--cG~G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~ 213 (281)
..++++++||-+| .|.|..+..+++. |++|++++.+++-++.+++.-. . .++.. .+.++ .+.+....
T Consensus 136 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga---~-~~~~~--~~~~~----~~~~~~~~ 205 (325)
T 3jyn_A 136 YQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGA---W-ETIDY--SHEDV----AKRVLELT 205 (325)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC---S-EEEET--TTSCH----HHHHHHHT
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC---C-EEEeC--CCccH----HHHHHHHh
Confidence 4667899999998 3467777777775 8899999999999998875321 1 22221 11111 11121112
Q ss_pred CCCCccEEEEcCCCcccHHHHHHhccCCCC
Q 023482 214 SSSGFAKVVANIPFNISTDVIKQLLPMGDI 243 (281)
Q Consensus 214 ~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~ 243 (281)
....+|+||.+..-.. .....+++.+++.
T Consensus 206 ~~~g~Dvvid~~g~~~-~~~~~~~l~~~G~ 234 (325)
T 3jyn_A 206 DGKKCPVVYDGVGQDT-WLTSLDSVAPRGL 234 (325)
T ss_dssp TTCCEEEEEESSCGGG-HHHHHTTEEEEEE
T ss_pred CCCCceEEEECCChHH-HHHHHHHhcCCCE
Confidence 3357899998765422 2233344444443
No 453
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=91.32 E-value=0.59 Score=39.75 Aligned_cols=82 Identities=16% Similarity=0.200 Sum_probs=52.3
Q ss_pred CCCEEEEEcCCccHHHHHH----HHcCCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCccccccccchhhHHHhhc
Q 023482 141 EGDIVLEIGPGTGSLTNVL----LNAGATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRSHMLSLFERRK 213 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~l----a~~~~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~~~~~~d~~~d~v~~~~ 213 (281)
.+++||=.|++ |.++..+ ++.|++|++++.++..++.+.+.+... .++.++.+|+.+...-+..++.+. .
T Consensus 31 ~~k~vlVTGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~--~ 107 (279)
T 1xg5_A 31 RDRLALVTGAS-GGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR--S 107 (279)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH--H
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHH--H
Confidence 46788888865 4444444 445889999999988777665554322 367889999887542222222221 1
Q ss_pred CCCCccEEEEcC
Q 023482 214 SSSGFAKVVANI 225 (281)
Q Consensus 214 ~~~~~d~Vi~n~ 225 (281)
..+.+|+||.|.
T Consensus 108 ~~g~iD~vi~~A 119 (279)
T 1xg5_A 108 QHSGVDICINNA 119 (279)
T ss_dssp HHCCCSEEEECC
T ss_pred hCCCCCEEEECC
Confidence 225689999874
No 454
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=91.29 E-value=0.74 Score=40.55 Aligned_cols=96 Identities=20% Similarity=0.256 Sum_probs=59.8
Q ss_pred cCCCCCEEEEEcCCc-cHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcC
Q 023482 138 AVQEGDIVLEIGPGT-GSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (281)
Q Consensus 138 ~~~~~~~VLDiGcG~-G~~t~~la~~--~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~ 214 (281)
.+.++++||-+|+|. |.++..+++. +.+|+++|.+++-++.+++.-. -.++..+ + + ..+.+.....
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa----~~~i~~~--~-~----~~~~v~~~t~ 236 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGA----DAAVKSG--A-G----AADAIRELTG 236 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTC----SEEEECS--T-T----HHHHHHHHHG
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC----CEEEcCC--C-c----HHHHHHHHhC
Confidence 567899999999875 7788888875 5799999999999998876321 1222221 1 1 1122222123
Q ss_pred CCCccEEEEcCCCcccHHHHHHhccCCCCc
Q 023482 215 SSGFAKVVANIPFNISTDVIKQLLPMGDIF 244 (281)
Q Consensus 215 ~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~ 244 (281)
...+|+||-...-........+++.+++.+
T Consensus 237 g~g~d~v~d~~G~~~~~~~~~~~l~~~G~i 266 (345)
T 3jv7_A 237 GQGATAVFDFVGAQSTIDTAQQVVAVDGHI 266 (345)
T ss_dssp GGCEEEEEESSCCHHHHHHHHHHEEEEEEE
T ss_pred CCCCeEEEECCCCHHHHHHHHHHHhcCCEE
Confidence 347999998766442333344555555544
No 455
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=91.25 E-value=0.43 Score=40.62 Aligned_cols=81 Identities=15% Similarity=0.101 Sum_probs=55.1
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
.++++|=.|++.|. ++..|++.|++|+.+|.+++.++.+.+.+. .++.++.+|+.+..--...++.+. ...+.
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~--~~~g~ 85 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVG--RGAVHHVVDLTNEVSVRALIDFTI--DTFGR 85 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHC--TTCEEEECCTTCHHHHHHHHHHHH--HHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC--CCeEEEECCCCCHHHHHHHHHHHH--HHcCC
Confidence 46789988876553 445556669999999999887776665552 478899999887543333333222 22357
Q ss_pred ccEEEEcC
Q 023482 218 FAKVVANI 225 (281)
Q Consensus 218 ~d~Vi~n~ 225 (281)
.|++|.|.
T Consensus 86 id~lv~nA 93 (271)
T 3tzq_B 86 LDIVDNNA 93 (271)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999874
No 456
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=91.21 E-value=1.1 Score=39.95 Aligned_cols=101 Identities=12% Similarity=0.131 Sum_probs=60.4
Q ss_pred HHhcCCCCCEEEEEcCCc-cHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHh
Q 023482 135 AAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GA-TVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFER 211 (281)
Q Consensus 135 ~~l~~~~~~~VLDiGcG~-G~~t~~la~~-~~-~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~ 211 (281)
....+.++++||-+|+|. |.++..+++. |+ +|+++|.+++-++.+++.-. . .++ |..+. .+...+.+..
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa---~-~vi--~~~~~--~~~~~~~v~~ 255 (373)
T 2fzw_A 184 NTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGA---T-ECI--NPQDF--SKPIQEVLIE 255 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTC---S-EEE--CGGGC--SSCHHHHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC---c-eEe--ccccc--cccHHHHHHH
Confidence 345677899999999874 6677777775 77 89999999999988875321 1 222 22110 0011122222
Q ss_pred hcCCCCccEEEEcCCCcccHHHHHHhccCC-CCc
Q 023482 212 RKSSSGFAKVVANIPFNISTDVIKQLLPMG-DIF 244 (281)
Q Consensus 212 ~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~-~~~ 244 (281)
...+.+|+||-...-........++++++ +.+
T Consensus 256 -~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~i 288 (373)
T 2fzw_A 256 -MTDGGVDYSFECIGNVKVMRAALEACHKGWGVS 288 (373)
T ss_dssp -HTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEE
T ss_pred -HhCCCCCEEEECCCcHHHHHHHHHhhccCCcEE
Confidence 12247999998765432333344566666 554
No 457
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=91.16 E-value=0.66 Score=41.55 Aligned_cols=101 Identities=14% Similarity=0.095 Sum_probs=60.8
Q ss_pred HHhcCCCCCEEEEEcCC-ccHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHh
Q 023482 135 AAAAVQEGDIVLEIGPG-TGSLTNVLLNA-GA-TVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFER 211 (281)
Q Consensus 135 ~~l~~~~~~~VLDiGcG-~G~~t~~la~~-~~-~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~ 211 (281)
....+.++++||=+|+| .|.++..+++. |+ +|+++|.+++-++.+++. +--.++ |..+. .+...+.+..
T Consensus 187 ~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~~vi--~~~~~--~~~~~~~i~~ 258 (378)
T 3uko_A 187 NTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF----GVNEFV--NPKDH--DKPIQEVIVD 258 (378)
T ss_dssp TTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTT----TCCEEE--CGGGC--SSCHHHHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----CCcEEE--ccccC--chhHHHHHHH
Confidence 44567789999999987 47778888876 77 899999999999887643 211222 21110 0111122222
Q ss_pred hcCCCCccEEEEcCCCcccHHHHHHhccCC-CCc
Q 023482 212 RKSSSGFAKVVANIPFNISTDVIKQLLPMG-DIF 244 (281)
Q Consensus 212 ~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~-~~~ 244 (281)
...+.+|+||-...-........+++.++ +.+
T Consensus 259 -~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~i 291 (378)
T 3uko_A 259 -LTDGGVDYSFECIGNVSVMRAALECCHKGWGTS 291 (378)
T ss_dssp -HTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEE
T ss_pred -hcCCCCCEEEECCCCHHHHHHHHHHhhccCCEE
Confidence 22348999998766433333344566654 544
No 458
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=91.13 E-value=0.8 Score=37.87 Aligned_cols=81 Identities=10% Similarity=0.097 Sum_probs=51.9
Q ss_pred CCEEEEEcCCccHHHHHHH----HcCC-------EEEEEeCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHH
Q 023482 142 GDIVLEIGPGTGSLTNVLL----NAGA-------TVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLF 209 (281)
Q Consensus 142 ~~~VLDiGcG~G~~t~~la----~~~~-------~v~gvD~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v 209 (281)
+++||=.|++ |.++..++ +.|. +|+.++.++..++.....+... .++.++.+|+.+...-...++.+
T Consensus 2 ~k~vlITGas-ggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 80 (244)
T 2bd0_A 2 KHILLITGAG-KGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI 80 (244)
T ss_dssp CEEEEEETTT-SHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCC-ChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence 3467777754 44555544 4577 9999999988877766655443 37889999988753222222222
Q ss_pred HhhcCCCCccEEEEcC
Q 023482 210 ERRKSSSGFAKVVANI 225 (281)
Q Consensus 210 ~~~~~~~~~d~Vi~n~ 225 (281)
. ...+..|++|.|.
T Consensus 81 ~--~~~g~id~li~~A 94 (244)
T 2bd0_A 81 V--ERYGHIDCLVNNA 94 (244)
T ss_dssp H--HHTSCCSEEEECC
T ss_pred H--HhCCCCCEEEEcC
Confidence 1 2235789999874
No 459
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=91.10 E-value=0.67 Score=40.96 Aligned_cols=99 Identities=18% Similarity=0.144 Sum_probs=57.8
Q ss_pred HHhcCCCCCEEEEEcCC-ccHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHh
Q 023482 135 AAAAVQEGDIVLEIGPG-TGSLTNVLLNA-GA-TVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFER 211 (281)
Q Consensus 135 ~~l~~~~~~~VLDiGcG-~G~~t~~la~~-~~-~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~ 211 (281)
...++ ++++||-+|+| .|..+..+++. |+ +|+++|.+++-++.+++.-. . .++ |..+-++ .+.+..
T Consensus 162 ~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga---~-~~~--~~~~~~~----~~~v~~ 230 (348)
T 2d8a_A 162 LAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGA---D-YVI--NPFEEDV----VKEVMD 230 (348)
T ss_dssp TTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTC---S-EEE--CTTTSCH----HHHHHH
T ss_pred HhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC---C-EEE--CCCCcCH----HHHHHH
Confidence 34466 88999999986 36677777765 77 99999999998888875321 1 122 2211111 112211
Q ss_pred hcCCCCccEEEEcCCCcccHHHHHHhccCCCCc
Q 023482 212 RKSSSGFAKVVANIPFNISTDVIKQLLPMGDIF 244 (281)
Q Consensus 212 ~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~ 244 (281)
......+|+||.+...........+++++++.+
T Consensus 231 ~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~i 263 (348)
T 2d8a_A 231 ITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRV 263 (348)
T ss_dssp HTTTSCEEEEEECSCCHHHHHHHHHHEEEEEEE
T ss_pred HcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEE
Confidence 122346899998876422223333455554443
No 460
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=91.09 E-value=1.1 Score=40.24 Aligned_cols=103 Identities=16% Similarity=0.123 Sum_probs=60.0
Q ss_pred HHhc-CCCCCEEEEEcCC-ccHHHHHHHHc-C-CEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHH
Q 023482 135 AAAA-VQEGDIVLEIGPG-TGSLTNVLLNA-G-ATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFE 210 (281)
Q Consensus 135 ~~l~-~~~~~~VLDiGcG-~G~~t~~la~~-~-~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~ 210 (281)
..++ +.++++||-+|+| .|.++..+++. | .+|++++.+++-++.+++. . --.++..+..+ .+...+.+.
T Consensus 188 ~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l-G---a~~vi~~~~~~---~~~~~~~v~ 260 (380)
T 1vj0_A 188 DEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI-G---ADLTLNRRETS---VEERRKAIM 260 (380)
T ss_dssp HTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT-T---CSEEEETTTSC---HHHHHHHHH
T ss_pred HhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHc-C---CcEEEeccccC---cchHHHHHH
Confidence 4456 7788999999976 46677777775 7 5999999999999888742 2 11233221000 001111121
Q ss_pred hhcCCCCccEEEEcCCCcccHHHHHHhccCCCCc
Q 023482 211 RRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIF 244 (281)
Q Consensus 211 ~~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~ 244 (281)
.......+|+||-+...........+++++++.+
T Consensus 261 ~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~i 294 (380)
T 1vj0_A 261 DITHGRGADFILEATGDSRALLEGSELLRRGGFY 294 (380)
T ss_dssp HHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEE
T ss_pred HHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEE
Confidence 1122336999998776433333344555555544
No 461
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=91.06 E-value=1.1 Score=40.02 Aligned_cols=101 Identities=13% Similarity=0.127 Sum_probs=60.2
Q ss_pred HHhcCCCCCEEEEEcCCc-cHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHh
Q 023482 135 AAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GA-TVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFER 211 (281)
Q Consensus 135 ~~l~~~~~~~VLDiGcG~-G~~t~~la~~-~~-~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~ 211 (281)
....+.++++||-+|+|. |.++..+++. |+ +|+++|.+++.++.+++. .. . .++ |..+. .+...+.+..
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l-Ga--~-~vi--~~~~~--~~~~~~~~~~ 256 (374)
T 2jhf_A 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV-GA--T-ECV--NPQDY--KKPIQEVLTE 256 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-TC--S-EEE--CGGGC--SSCHHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh-CC--c-eEe--ccccc--chhHHHHHHH
Confidence 345677899999999874 7777777775 77 899999999998888643 21 1 222 22110 0011122222
Q ss_pred hcCCCCccEEEEcCCCcccHHHHHHhccCC-CCc
Q 023482 212 RKSSSGFAKVVANIPFNISTDVIKQLLPMG-DIF 244 (281)
Q Consensus 212 ~~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~-~~~ 244 (281)
...+.+|+||-...-........++++++ +.+
T Consensus 257 -~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~i 289 (374)
T 2jhf_A 257 -MSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVS 289 (374)
T ss_dssp -HTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEE
T ss_pred -HhCCCCcEEEECCCCHHHHHHHHHHhhcCCcEE
Confidence 12247999998766432333344566666 554
No 462
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=91.04 E-value=0.62 Score=41.99 Aligned_cols=47 Identities=21% Similarity=0.285 Sum_probs=39.4
Q ss_pred HHhcCCCCCEEEEEcCCc-cHHHHHHHHc-CC-EEEEEeCCHHHHHHHHH
Q 023482 135 AAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GA-TVLAIEKDQHMVGLVRE 181 (281)
Q Consensus 135 ~~l~~~~~~~VLDiGcG~-G~~t~~la~~-~~-~v~gvD~s~~~l~~a~~ 181 (281)
....+.++++||-+|+|. |.++..+++. |+ +|+++|.+++.++.+++
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 1kol_A 179 VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA 228 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH
Confidence 455777899999999875 7788888876 77 79999999999998875
No 463
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=90.97 E-value=0.55 Score=39.34 Aligned_cols=82 Identities=15% Similarity=0.159 Sum_probs=51.1
Q ss_pred CCCEEEEEcCCccHHHHHH----HHcCCEEEEEeC-CHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcC
Q 023482 141 EGDIVLEIGPGTGSLTNVL----LNAGATVLAIEK-DQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~l----a~~~~~v~gvD~-s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~ 214 (281)
.+++||=.|++ |.++..+ ++.|++|+.++. +++.++...+.+... .++.++.+|+.+.......++.+. ..
T Consensus 6 ~~k~vlITGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~--~~ 82 (261)
T 1gee_A 6 EGKVVVITGSS-TGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAI--KE 82 (261)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH--HH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH--HH
Confidence 45688887755 4445444 445889999999 877666555544332 378899999887532222222221 12
Q ss_pred CCCccEEEEcC
Q 023482 215 SSGFAKVVANI 225 (281)
Q Consensus 215 ~~~~d~Vi~n~ 225 (281)
.+..|++|.|.
T Consensus 83 ~g~id~li~~A 93 (261)
T 1gee_A 83 FGKLDVMINNA 93 (261)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 24689999874
No 464
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=90.95 E-value=0.29 Score=41.19 Aligned_cols=81 Identities=15% Similarity=0.196 Sum_probs=47.5
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
.++++|=.|++.|. ++..+++.|++|+.++.+++..+.+.+.+. .++.++.+|+.+.......++.+. ...+.
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~--~~~g~ 81 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELG--AAVRFRNADVTNEADATAALAFAK--QEFGH 81 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------CEEEECCTTCHHHHHHHHHHHH--HHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC--CceEEEEccCCCHHHHHHHHHHHH--HHcCC
Confidence 46788988877653 445555668999999999877665544432 378899999887543333333322 22357
Q ss_pred ccEEEEcC
Q 023482 218 FAKVVANI 225 (281)
Q Consensus 218 ~d~Vi~n~ 225 (281)
.|++|.|.
T Consensus 82 id~lv~nA 89 (257)
T 3tpc_A 82 VHGLVNCA 89 (257)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999874
No 465
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=90.92 E-value=0.21 Score=44.02 Aligned_cols=82 Identities=16% Similarity=0.306 Sum_probs=53.1
Q ss_pred HHhcCCCCCEEEEEcC--CccHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHh
Q 023482 135 AAAAVQEGDIVLEIGP--GTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFER 211 (281)
Q Consensus 135 ~~l~~~~~~~VLDiGc--G~G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~ 211 (281)
....+.++++||-.|+ |.|..+..+++. |++|++++.+++-++.+.+.+.. . .++ |..+.++ .+.+..
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~--~-~~~--~~~~~~~----~~~~~~ 213 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGF--D-GAI--DYKNEDL----AAGLKR 213 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCC--S-EEE--ETTTSCH----HHHHHH
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC--C-EEE--ECCCHHH----HHHHHH
Confidence 5567889999999998 567777777765 88999999999988887444321 1 222 2222111 122221
Q ss_pred hcCCCCccEEEEcCC
Q 023482 212 RKSSSGFAKVVANIP 226 (281)
Q Consensus 212 ~~~~~~~d~Vi~n~P 226 (281)
...+.+|+||.+.-
T Consensus 214 -~~~~~~d~vi~~~g 227 (336)
T 4b7c_A 214 -ECPKGIDVFFDNVG 227 (336)
T ss_dssp -HCTTCEEEEEESSC
T ss_pred -hcCCCceEEEECCC
Confidence 22457999998765
No 466
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=90.86 E-value=0.2 Score=45.17 Aligned_cols=77 Identities=5% Similarity=0.027 Sum_probs=51.4
Q ss_pred CEEEEEcCCccHHHHHHHHc------------------CCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcC---ccc
Q 023482 143 DIVLEIGPGTGSLTNVLLNA------------------GATVLAIEKDQHMVGLVRERFASI---DQLKVLQED---FVK 198 (281)
Q Consensus 143 ~~VLDiGcG~G~~t~~la~~------------------~~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD---~~~ 198 (281)
-+|+|+||++|..|..+... ..+|+.-|+-.+....+-+.+... .+..|+.|. +..
T Consensus 53 ~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy~ 132 (359)
T 1m6e_X 53 LAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFYG 132 (359)
T ss_dssp ECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSSS
T ss_pred eEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhhh
Confidence 47999999999988765432 137888888877777776666531 123444443 333
Q ss_pred cccccchhhHHHhhcCCCCccEEEEcCCCcccH
Q 023482 199 CHIRSHMLSLFERRKSSSGFAKVVANIPFNIST 231 (281)
Q Consensus 199 ~~~~d~~~d~v~~~~~~~~~d~Vi~n~P~~~~~ 231 (281)
-.+ +..++|+|++|..++|.+
T Consensus 133 rlf------------p~~S~d~v~Ss~aLHWls 153 (359)
T 1m6e_X 133 RLF------------PRNTLHFIHSSYSLMWLS 153 (359)
T ss_dssp CCS------------CTTCBSCEEEESCTTBCS
T ss_pred ccC------------CCCceEEEEehhhhhhcc
Confidence 333 347789999998888755
No 467
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=90.85 E-value=0.47 Score=40.99 Aligned_cols=83 Identities=12% Similarity=0.088 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCC--HHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKD--QHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s--~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~ 214 (281)
.++++|=.|.+.|. ++..|++.|++|+.++.+ +...+.+.+..... .++.++.+|+.+....+..++.+. ..
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~--~~ 125 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAR--EA 125 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHH--HH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHH--HH
Confidence 56789999976553 444555568999999986 34444444444333 488999999887543333333322 22
Q ss_pred CCCccEEEEcC
Q 023482 215 SSGFAKVVANI 225 (281)
Q Consensus 215 ~~~~d~Vi~n~ 225 (281)
.+..|++|.|.
T Consensus 126 ~g~iD~lv~nA 136 (294)
T 3r3s_A 126 LGGLDILALVA 136 (294)
T ss_dssp HTCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 35789999874
No 468
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=90.83 E-value=0.64 Score=39.04 Aligned_cols=81 Identities=15% Similarity=0.138 Sum_probs=51.7
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
.+++||=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+. .++.++.+|+.+..-....++.+. ...+.
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~--~~~g~ 79 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG--DAARYQHLDVTIEEDWQRVVAYAR--EEFGS 79 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTG--GGEEEEECCTTCHHHHHHHHHHHH--HHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CceeEEEecCCCHHHHHHHHHHHH--HHcCC
Confidence 46788888865443 344445568999999999887766554442 368889999876532222222221 12257
Q ss_pred ccEEEEcC
Q 023482 218 FAKVVANI 225 (281)
Q Consensus 218 ~d~Vi~n~ 225 (281)
.|++|.|.
T Consensus 80 iD~lv~nA 87 (254)
T 1hdc_A 80 VDGLVNNA 87 (254)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999874
No 469
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=90.80 E-value=0.85 Score=38.46 Aligned_cols=81 Identities=16% Similarity=0.165 Sum_probs=52.2
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
.+++||=.|++.|. ++..|++.|++|+.++.+++..+.+.+.+. .++.++.+|+.+..--...++.+. ...+.
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~--~~~g~ 81 (260)
T 1nff_A 6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA--DAARYVHLDVTQPAQWKAAVDTAV--TAFGG 81 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG--GGEEEEECCTTCHHHHHHHHHHHH--HHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh--cCceEEEecCCCHHHHHHHHHHHH--HHcCC
Confidence 46788888866543 334445568999999999887776655543 257889999877542222222221 12257
Q ss_pred ccEEEEcC
Q 023482 218 FAKVVANI 225 (281)
Q Consensus 218 ~d~Vi~n~ 225 (281)
.|++|.|.
T Consensus 82 iD~lv~~A 89 (260)
T 1nff_A 82 LHVLVNNA 89 (260)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999874
No 470
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=90.62 E-value=0.75 Score=38.37 Aligned_cols=82 Identities=15% Similarity=0.102 Sum_probs=51.3
Q ss_pred CCEEEEEcCCccH---HHHHHHHcCCEEEEEeC-CHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 142 GDIVLEIGPGTGS---LTNVLLNAGATVLAIEK-DQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 142 ~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~-s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
++++|=-|.+.|. ++..|++.|++|+.++. +++..+.+.+.+... .++.++.+|+.+..--+..++.+. ...+
T Consensus 4 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~--~~~g 81 (246)
T 3osu_A 4 TKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVV--SQFG 81 (246)
T ss_dssp SCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHH--HHHS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH--HHcC
Confidence 5677877765543 34445556899999887 556666555554433 488999999987543333333221 2235
Q ss_pred CccEEEEcC
Q 023482 217 GFAKVVANI 225 (281)
Q Consensus 217 ~~d~Vi~n~ 225 (281)
..|++|.|.
T Consensus 82 ~id~lv~nA 90 (246)
T 3osu_A 82 SLDVLVNNA 90 (246)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 789999874
No 471
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=90.60 E-value=0.76 Score=38.92 Aligned_cols=83 Identities=12% Similarity=0.068 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEe-CCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIE-KDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD-~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
.++++|=.|++.|. ++..|++.|++|+.++ .+....+......... .++.++.+|+.+..--+..++.+. ...
T Consensus 24 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~--~~~ 101 (269)
T 3gk3_A 24 AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVL--ADF 101 (269)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHH--HHH
T ss_pred cCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH--HHc
Confidence 46678877865443 3444455588999998 6666665555444433 489999999987543333333322 222
Q ss_pred CCccEEEEcC
Q 023482 216 SGFAKVVANI 225 (281)
Q Consensus 216 ~~~d~Vi~n~ 225 (281)
+..|++|.|.
T Consensus 102 g~id~li~nA 111 (269)
T 3gk3_A 102 GKVDVLINNA 111 (269)
T ss_dssp SCCSEEEECC
T ss_pred CCCCEEEECC
Confidence 5789999874
No 472
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=90.53 E-value=0.44 Score=40.17 Aligned_cols=83 Identities=16% Similarity=0.176 Sum_probs=51.2
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHH-HHHHHHHhcC--CCCeEEEEcCccccccccchhhHHHhhcC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHM-VGLVRERFAS--IDQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~-l~~a~~~~~~--~~~v~~~~gD~~~~~~~d~~~d~v~~~~~ 214 (281)
.+++||=.|++.|. ++..|++.|++|+.++.+++. ++.+.+.+.. ..++.++.+|+.+...-+..++.+. ..
T Consensus 3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~--~~ 80 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAV--RQ 80 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHH--HH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHH--Hh
Confidence 35678877865443 334445568999999998766 6555444432 2478889999887543222232221 12
Q ss_pred CCCccEEEEcC
Q 023482 215 SSGFAKVVANI 225 (281)
Q Consensus 215 ~~~~d~Vi~n~ 225 (281)
.+..|++|.|.
T Consensus 81 ~g~iD~lv~~A 91 (260)
T 1x1t_A 81 MGRIDILVNNA 91 (260)
T ss_dssp HSCCSEEEECC
T ss_pred cCCCCEEEECC
Confidence 25789999874
No 473
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=90.52 E-value=0.71 Score=40.51 Aligned_cols=97 Identities=21% Similarity=0.306 Sum_probs=58.0
Q ss_pred hcCCCCCEEEEEcC--CccHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhc
Q 023482 137 AAVQEGDIVLEIGP--GTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRK 213 (281)
Q Consensus 137 l~~~~~~~VLDiGc--G~G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~ 213 (281)
..+.++++||-+|+ |.|..+..+++. |++|++++.+++-++.+++. +.-.++..+ +.++ .+.+....
T Consensus 144 ~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga~~~~~~~--~~~~----~~~~~~~~ 213 (334)
T 3qwb_A 144 YHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEY----GAEYLINAS--KEDI----LRQVLKFT 213 (334)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TCSEEEETT--TSCH----HHHHHHHT
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCcEEEeCC--CchH----HHHHHHHh
Confidence 36678999999994 567777777775 88999999999998887663 211222221 1111 11221112
Q ss_pred CCCCccEEEEcCCCcccHHHHHHhccCCCCc
Q 023482 214 SSSGFAKVVANIPFNISTDVIKQLLPMGDIF 244 (281)
Q Consensus 214 ~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~ 244 (281)
....+|+||.+..-.. .....+++++++.+
T Consensus 214 ~~~g~D~vid~~g~~~-~~~~~~~l~~~G~i 243 (334)
T 3qwb_A 214 NGKGVDASFDSVGKDT-FEISLAALKRKGVF 243 (334)
T ss_dssp TTSCEEEEEECCGGGG-HHHHHHHEEEEEEE
T ss_pred CCCCceEEEECCChHH-HHHHHHHhccCCEE
Confidence 3457999998765432 33334455555543
No 474
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=90.52 E-value=0.62 Score=39.03 Aligned_cols=80 Identities=11% Similarity=0.086 Sum_probs=51.6
Q ss_pred CCCEEEEEcCCccHHHHHH----HHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCC
Q 023482 141 EGDIVLEIGPGTGSLTNVL----LNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~l----a~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~ 216 (281)
.+++||=.|++. .++..+ ++.|.+|+.++.++..++.+.+.+. .++.++.+|+.+..--+..++.+. ...+
T Consensus 11 ~~k~vlVTGasg-giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~--~~~g 85 (265)
T 2o23_A 11 KGLVAVITGGAS-GLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG--NNCVFAPADVTSEKDVQTALALAK--GKFG 85 (265)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHHH--HHHS
T ss_pred CCCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhC--CceEEEEcCCCCHHHHHHHHHHHH--HHCC
Confidence 467899888754 444444 4458899999998776665554442 478999999887542222222221 1224
Q ss_pred CccEEEEcC
Q 023482 217 GFAKVVANI 225 (281)
Q Consensus 217 ~~d~Vi~n~ 225 (281)
..|++|.|.
T Consensus 86 ~id~li~~A 94 (265)
T 2o23_A 86 RVDVAVNCA 94 (265)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 689999874
No 475
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=90.50 E-value=0.54 Score=42.13 Aligned_cols=48 Identities=23% Similarity=0.231 Sum_probs=39.6
Q ss_pred HHHhcCCCCCEEEEEcCCc-cHHHHHHHHc-CCEEEEEeCCHHHHHHHHH
Q 023482 134 AAAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GATVLAIEKDQHMVGLVRE 181 (281)
Q Consensus 134 ~~~l~~~~~~~VLDiGcG~-G~~t~~la~~-~~~v~gvD~s~~~l~~a~~ 181 (281)
+..+.+.++++||-+|+|. |.++..+++. |++|+++|.+++-++.+++
T Consensus 187 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~ 236 (369)
T 1uuf_A 187 LRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA 236 (369)
T ss_dssp HHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 3445777899999999984 7777788775 8899999999999988876
No 476
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=90.47 E-value=0.95 Score=37.91 Aligned_cols=78 Identities=23% Similarity=0.311 Sum_probs=49.0
Q ss_pred EEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCCccE
Q 023482 144 IVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAK 220 (281)
Q Consensus 144 ~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~ 220 (281)
++|=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+. +++.++.+|+.+..-.+..++.+. ...+..|+
T Consensus 2 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~--~~~g~iD~ 77 (248)
T 3asu_A 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG--DNLYIAQLDVRNRAAIEEMLASLP--AEWCNIDI 77 (248)
T ss_dssp EEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHTSC--TTTCCCCE
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CceEEEEcCCCCHHHHHHHHHHHH--HhCCCCCE
Confidence 45555654332 445555668999999999988776665553 478899999877432222222111 22357899
Q ss_pred EEEcC
Q 023482 221 VVANI 225 (281)
Q Consensus 221 Vi~n~ 225 (281)
+|.|.
T Consensus 78 lvnnA 82 (248)
T 3asu_A 78 LVNNA 82 (248)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 99874
No 477
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=90.46 E-value=1.5 Score=39.57 Aligned_cols=97 Identities=19% Similarity=0.218 Sum_probs=58.0
Q ss_pred cCCCCCEEEEEcCCc-cHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcC
Q 023482 138 AVQEGDIVLEIGPGT-GSLTNVLLNA-GA-TVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (281)
Q Consensus 138 ~~~~~~~VLDiGcG~-G~~t~~la~~-~~-~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~ 214 (281)
.+.++++||=+|+|. |.++..+++. |+ +|+++|.+++-++.+++.-. -.++. ..+-+ ..+.+.....
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa----~~vi~--~~~~~----~~~~i~~~t~ 279 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGA----DHVID--PTKEN----FVEAVLDYTN 279 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTC----SEEEC--TTTSC----HHHHHHHHTT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC----CEEEc--CCCCC----HHHHHHHHhC
Confidence 467889999999864 6677777775 77 99999999999998876422 12222 11111 1122222133
Q ss_pred CCCccEEEEcCCCc-ccHHHHHHhc----cCCCCc
Q 023482 215 SSGFAKVVANIPFN-ISTDVIKQLL----PMGDIF 244 (281)
Q Consensus 215 ~~~~d~Vi~n~P~~-~~~~~~~~ll----~~~~~~ 244 (281)
...+|+||-...-. ........++ ..++.+
T Consensus 280 g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~i 314 (404)
T 3ip1_A 280 GLGAKLFLEATGVPQLVWPQIEEVIWRARGINATV 314 (404)
T ss_dssp TCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEE
T ss_pred CCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEE
Confidence 44799999876543 1222233333 666654
No 478
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=90.45 E-value=0.54 Score=40.30 Aligned_cols=83 Identities=12% Similarity=0.097 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCH-HHHHHHHHHhc--CCCCeEEEEcCccc----cccccchhhHHH
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQ-HMVGLVRERFA--SIDQLKVLQEDFVK----CHIRSHMLSLFE 210 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~-~~l~~a~~~~~--~~~~v~~~~gD~~~----~~~~d~~~d~v~ 210 (281)
.++++|=.|++.|. ++..|++.|++|+.++.++ +.++.+.+.+. ...++.++.+|+.+ ....+..++.+.
T Consensus 22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~ 101 (288)
T 2x9g_A 22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCF 101 (288)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHH
Confidence 46788888876553 3444455689999999987 66655554443 22478999999987 322222222221
Q ss_pred hhcCCCCccEEEEcC
Q 023482 211 RRKSSSGFAKVVANI 225 (281)
Q Consensus 211 ~~~~~~~~d~Vi~n~ 225 (281)
...+..|++|.|.
T Consensus 102 --~~~g~iD~lvnnA 114 (288)
T 2x9g_A 102 --RAFGRCDVLVNNA 114 (288)
T ss_dssp --HHHSCCCEEEECC
T ss_pred --HhcCCCCEEEECC
Confidence 1235789999874
No 479
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=90.33 E-value=0.72 Score=39.12 Aligned_cols=83 Identities=16% Similarity=0.172 Sum_probs=53.3
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeC-CHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEK-DQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~-s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
.++++|=.|++.|. ++..|++.|++|+.++. +++..+...+.+... .++.++.+|+.+..--...++.+. ...
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~--~~~ 94 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAV--AHF 94 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH--HHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH--HHc
Confidence 56789988876554 44555566899999876 455555555554433 489999999987543333333322 223
Q ss_pred CCccEEEEcC
Q 023482 216 SGFAKVVANI 225 (281)
Q Consensus 216 ~~~d~Vi~n~ 225 (281)
+..|++|.|.
T Consensus 95 g~id~lvnnA 104 (270)
T 3is3_A 95 GHLDIAVSNS 104 (270)
T ss_dssp SCCCEEECCC
T ss_pred CCCCEEEECC
Confidence 5789999874
No 480
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=90.30 E-value=0.3 Score=42.78 Aligned_cols=83 Identities=14% Similarity=0.209 Sum_probs=53.6
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCC----------HHHHHHHHHHhcCC-CCeEEEEcCccccccccchh
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKD----------QHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHML 206 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s----------~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~ 206 (281)
.++++|=.|++.|. ++..|++.|++|+.+|.+ ...++.....+... .++.++.+|+.+..-....+
T Consensus 26 ~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~ 105 (322)
T 3qlj_A 26 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLI 105 (322)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence 57789988876553 445555669999999987 55555555544433 47889999988754333333
Q ss_pred hHHHhhcCCCCccEEEEcC
Q 023482 207 SLFERRKSSSGFAKVVANI 225 (281)
Q Consensus 207 d~v~~~~~~~~~d~Vi~n~ 225 (281)
+.+. ...+..|++|.|.
T Consensus 106 ~~~~--~~~g~iD~lv~nA 122 (322)
T 3qlj_A 106 QTAV--ETFGGLDVLVNNA 122 (322)
T ss_dssp HHHH--HHHSCCCEEECCC
T ss_pred HHHH--HHcCCCCEEEECC
Confidence 3322 2235789999874
No 481
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=90.17 E-value=0.38 Score=40.08 Aligned_cols=83 Identities=14% Similarity=0.159 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCccHHHHHHH----HcCCEEEEEeCC-HHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcC
Q 023482 141 EGDIVLEIGPGTGSLTNVLL----NAGATVLAIEKD-QHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~la----~~~~~v~gvD~s-~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~ 214 (281)
.+++||=.|++ |.++..++ +.|.+|++++.+ ++.++.+.+.+... .++.++.+|+.+...-...++.+. ..
T Consensus 6 ~~k~vlVTGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~--~~ 82 (258)
T 3afn_B 6 KGKRVLITGSS-QGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFV--AK 82 (258)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH--HH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH--HH
Confidence 45688877754 55555544 458899999998 66555544444322 378999999887542222222221 12
Q ss_pred CCCccEEEEcCC
Q 023482 215 SSGFAKVVANIP 226 (281)
Q Consensus 215 ~~~~d~Vi~n~P 226 (281)
.+..|+||.|.-
T Consensus 83 ~g~id~vi~~Ag 94 (258)
T 3afn_B 83 FGGIDVLINNAG 94 (258)
T ss_dssp HSSCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 246899998753
No 482
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=90.09 E-value=0.89 Score=38.02 Aligned_cols=83 Identities=20% Similarity=0.214 Sum_probs=49.9
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC--------CCeEEEEcCccccccccchhhHH
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI--------DQLKVLQEDFVKCHIRSHMLSLF 209 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~--------~~v~~~~gD~~~~~~~d~~~d~v 209 (281)
.+++||=.|++.|. ++..|++.|.+|+.++.++..++...+.+... .++.++.+|+.+...-...++.+
T Consensus 6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 85 (264)
T 2pd6_A 6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV 85 (264)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence 45688888865443 33344455889999999988776655544321 36889999988753222222222
Q ss_pred HhhcCCCCc-cEEEEcC
Q 023482 210 ERRKSSSGF-AKVVANI 225 (281)
Q Consensus 210 ~~~~~~~~~-d~Vi~n~ 225 (281)
. ...+.. |+||.|.
T Consensus 86 ~--~~~g~i~d~vi~~A 100 (264)
T 2pd6_A 86 Q--ACFSRPPSVVVSCA 100 (264)
T ss_dssp H--HHHSSCCSEEEECC
T ss_pred H--HHhCCCCeEEEECC
Confidence 1 112345 9999874
No 483
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=90.07 E-value=0.84 Score=38.30 Aligned_cols=85 Identities=15% Similarity=0.218 Sum_probs=53.3
Q ss_pred CCCEEEEEcCCccH---HHHHHHH---cCCEEEEEeCCHHHHHHHHHHhcC---CCCeEEEEcCccccccccchhhHHHh
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLN---AGATVLAIEKDQHMVGLVRERFAS---IDQLKVLQEDFVKCHIRSHMLSLFER 211 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~---~~~~v~gvD~s~~~l~~a~~~~~~---~~~v~~~~gD~~~~~~~d~~~d~v~~ 211 (281)
.++++|=.|++.|. ++..|++ .|++|+.++.+++.++.+.+.+.. ..++.++.+|+.+..-....++.+..
T Consensus 5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (259)
T 1oaa_A 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE 84 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence 35678878876553 4455555 688999999999887766655532 23688999999875433333333211
Q ss_pred hcCCCCcc--EEEEcC
Q 023482 212 RKSSSGFA--KVVANI 225 (281)
Q Consensus 212 ~~~~~~~d--~Vi~n~ 225 (281)
....+.+| ++|.|.
T Consensus 85 ~~~~g~~d~~~lvnnA 100 (259)
T 1oaa_A 85 LPRPEGLQRLLLINNA 100 (259)
T ss_dssp SCCCTTCCEEEEEECC
T ss_pred ccccccCCccEEEECC
Confidence 00234667 888763
No 484
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=90.04 E-value=1.3 Score=38.70 Aligned_cols=98 Identities=16% Similarity=0.200 Sum_probs=58.3
Q ss_pred HhcCCCCCEEEEEcC--CccHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhh
Q 023482 136 AAAVQEGDIVLEIGP--GTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERR 212 (281)
Q Consensus 136 ~l~~~~~~~VLDiGc--G~G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~ 212 (281)
...+.++++||-.|+ |.|..+..++.. |++|+++|.+++.++.+++. .. . .++ |..+..+ .+.+...
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~-g~--~-~~~--d~~~~~~----~~~i~~~ 209 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKL-GC--H-HTI--NYSTQDF----AEVVREI 209 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-TC--S-EEE--ETTTSCH----HHHHHHH
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CC--C-EEE--ECCCHHH----HHHHHHH
Confidence 345678899999995 677777777765 88999999999888888653 21 1 122 2222111 1112111
Q ss_pred cCCCCccEEEEcCCCcccHHHHHHhccCCCCc
Q 023482 213 KSSSGFAKVVANIPFNISTDVIKQLLPMGDIF 244 (281)
Q Consensus 213 ~~~~~~d~Vi~n~P~~~~~~~~~~ll~~~~~~ 244 (281)
.....+|++|.+..-.. .....+++++++.+
T Consensus 210 ~~~~~~d~vi~~~g~~~-~~~~~~~l~~~G~i 240 (333)
T 1wly_A 210 TGGKGVDVVYDSIGKDT-LQKSLDCLRPRGMC 240 (333)
T ss_dssp HTTCCEEEEEECSCTTT-HHHHHHTEEEEEEE
T ss_pred hCCCCCeEEEECCcHHH-HHHHHHhhccCCEE
Confidence 22346899998865432 33333455555443
No 485
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=90.01 E-value=0.73 Score=38.73 Aligned_cols=82 Identities=18% Similarity=0.187 Sum_probs=51.6
Q ss_pred CCCEEEEEcCCccHHHHHH----HHcCCEEEEEeC-CHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcC
Q 023482 141 EGDIVLEIGPGTGSLTNVL----LNAGATVLAIEK-DQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~l----a~~~~~v~gvD~-s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~ 214 (281)
.+++||=.|++ |.++..+ ++.|.+|++++. ++..++...+.+... .++.++.+|+.+...-...++.+. ..
T Consensus 20 ~~k~vlItGas-ggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~--~~ 96 (274)
T 1ja9_A 20 AGKVALTTGAG-RGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAV--SH 96 (274)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH--HH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH--HH
Confidence 45688877754 5555554 445889999999 777766655544432 478899999887532222222211 12
Q ss_pred CCCccEEEEcC
Q 023482 215 SSGFAKVVANI 225 (281)
Q Consensus 215 ~~~~d~Vi~n~ 225 (281)
.+..|++|.|.
T Consensus 97 ~~~~d~vi~~A 107 (274)
T 1ja9_A 97 FGGLDFVMSNS 107 (274)
T ss_dssp HSCEEEEECCC
T ss_pred cCCCCEEEECC
Confidence 24689999874
No 486
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=89.82 E-value=0.97 Score=37.12 Aligned_cols=78 Identities=14% Similarity=0.140 Sum_probs=50.1
Q ss_pred CCEEEEEcCCccHHHHHH----HHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 142 GDIVLEIGPGTGSLTNVL----LNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 142 ~~~VLDiGcG~G~~t~~l----a~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
+++||=.|++ |.++..+ ++.|.+|++++.+++.++.....+. ++.++.+|+.+..--+..++.+. ...+.
T Consensus 5 ~k~vlVtGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~--~~~~~ 78 (234)
T 2ehd_A 5 KGAVLITGAS-RGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE---GALPLPGDVREEGDWARAVAAME--EAFGE 78 (234)
T ss_dssp CCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST---TCEEEECCTTCHHHHHHHHHHHH--HHHSC
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh---hceEEEecCCCHHHHHHHHHHHH--HHcCC
Confidence 4578877755 4455444 4458899999999887766555443 68899999887543222222221 11246
Q ss_pred ccEEEEcC
Q 023482 218 FAKVVANI 225 (281)
Q Consensus 218 ~d~Vi~n~ 225 (281)
.|++|.|.
T Consensus 79 id~li~~A 86 (234)
T 2ehd_A 79 LSALVNNA 86 (234)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999874
No 487
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=89.78 E-value=0.69 Score=39.12 Aligned_cols=83 Identities=6% Similarity=0.126 Sum_probs=52.8
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCC---HHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhc
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKD---QHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRK 213 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s---~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~ 213 (281)
.++++|=.|.+.|. ++..|++.|++|+.++.+ .+.++.+.+.+... .++.++.+|+.+..--...++.+. .
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~--~ 87 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAE--K 87 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHH--H
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH--H
Confidence 56789988877653 334444558899998764 45555555555443 378999999987543333333332 2
Q ss_pred CCCCccEEEEcC
Q 023482 214 SSSGFAKVVANI 225 (281)
Q Consensus 214 ~~~~~d~Vi~n~ 225 (281)
..+..|++|.|.
T Consensus 88 ~~g~iD~lvnnA 99 (262)
T 3ksu_A 88 EFGKVDIAINTV 99 (262)
T ss_dssp HHCSEEEEEECC
T ss_pred HcCCCCEEEECC
Confidence 235789999874
No 488
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=89.78 E-value=0.61 Score=38.64 Aligned_cols=82 Identities=17% Similarity=0.175 Sum_probs=49.7
Q ss_pred CCCEEEEEcCCccHHHHH----HHHcCCEEEEE-eCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcC
Q 023482 141 EGDIVLEIGPGTGSLTNV----LLNAGATVLAI-EKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~----la~~~~~v~gv-D~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~ 214 (281)
.+++||=.|++ |.++.. |++.|++|+.+ +.++..++...+.+... .++.++.+|+.+...-...++.+. ..
T Consensus 4 ~~~~vlItGas-ggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~--~~ 80 (247)
T 2hq1_A 4 KGKTAIVTGSS-RGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAM--DA 80 (247)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHH--HH
T ss_pred CCcEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH--Hh
Confidence 35678888865 444444 44558899999 56665555544444322 478999999887542222222221 12
Q ss_pred CCCccEEEEcC
Q 023482 215 SSGFAKVVANI 225 (281)
Q Consensus 215 ~~~~d~Vi~n~ 225 (281)
.+..|++|.|.
T Consensus 81 ~~~~d~vi~~A 91 (247)
T 2hq1_A 81 FGRIDILVNNA 91 (247)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 24689999874
No 489
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=89.77 E-value=1.1 Score=38.23 Aligned_cols=83 Identities=13% Similarity=0.138 Sum_probs=53.2
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCC-HHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKD-QHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s-~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
.++++|=.|++.|. ++..|++.|++|+.++.+ .+..+.+.+.+... .++.++.+|+.+..--...++.+. ...
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~--~~~ 107 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETV--EAL 107 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH--HHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH--HHc
Confidence 56789999987654 445556668999998654 45555555444433 488999999987543332333221 223
Q ss_pred CCccEEEEcC
Q 023482 216 SGFAKVVANI 225 (281)
Q Consensus 216 ~~~d~Vi~n~ 225 (281)
+..|++|.|.
T Consensus 108 g~iD~lvnnA 117 (271)
T 3v2g_A 108 GGLDILVNSA 117 (271)
T ss_dssp SCCCEEEECC
T ss_pred CCCcEEEECC
Confidence 5789999874
No 490
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=89.75 E-value=0.6 Score=39.68 Aligned_cols=81 Identities=14% Similarity=0.183 Sum_probs=51.7
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~ 217 (281)
.+++||=.|++.|. ++..|++.|.+|++++.+++.++....... +++.++.+|+.+...-+..++.+. ...+.
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~--~~~g~ 79 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYP--DRAEAISLDVTDGERIDVVAADVL--ARYGR 79 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCT--TTEEEEECCTTCHHHHHHHHHHHH--HHHSC
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc--CCceEEEeeCCCHHHHHHHHHHHH--HhCCC
Confidence 35678877765442 334445568999999999887766555432 489999999987543222222221 22356
Q ss_pred ccEEEEcC
Q 023482 218 FAKVVANI 225 (281)
Q Consensus 218 ~d~Vi~n~ 225 (281)
.|++|.|.
T Consensus 80 id~lv~~A 87 (281)
T 3m1a_A 80 VDVLVNNA 87 (281)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 89999874
No 491
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=89.73 E-value=0.71 Score=39.13 Aligned_cols=83 Identities=14% Similarity=0.150 Sum_probs=52.9
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEE-eCCHHHHHHHHHHhcCC-CCeEEEEcCccccccccchhhHHHhhcCC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAI-EKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gv-D~s~~~l~~a~~~~~~~-~~v~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
.+++||=.|++.|. ++..|++.|++|+.+ ..+++..+...+.+... .++.++.+|+.+..-.+..++.+. ...
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~--~~~ 102 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVD--RQF 102 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH--HHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH--HhC
Confidence 46788888865543 334445558898776 77887777666655433 488999999987543333333222 122
Q ss_pred CCccEEEEcC
Q 023482 216 SGFAKVVANI 225 (281)
Q Consensus 216 ~~~d~Vi~n~ 225 (281)
+..|++|.|.
T Consensus 103 g~id~li~nA 112 (272)
T 4e3z_A 103 GRLDGLVNNA 112 (272)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 5789999874
No 492
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=89.73 E-value=1.3 Score=36.63 Aligned_cols=79 Identities=11% Similarity=0.207 Sum_probs=51.1
Q ss_pred CCCEEEEEcCCccHHHHHH----HHcCCEEEEEeCCHHHHHHHHHHhcCCCCe-EEEEcCccccccccchhhHHHhhcCC
Q 023482 141 EGDIVLEIGPGTGSLTNVL----LNAGATVLAIEKDQHMVGLVRERFASIDQL-KVLQEDFVKCHIRSHMLSLFERRKSS 215 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~l----a~~~~~v~gvD~s~~~l~~a~~~~~~~~~v-~~~~gD~~~~~~~d~~~d~v~~~~~~ 215 (281)
.+++||=.|++ |.++..+ ++.|.+|++++.+++.++.+.+.+. .++ .++.+|+.+...-...++.+. . .
T Consensus 10 ~~k~vlITGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~--~-~ 83 (254)
T 2wsb_A 10 DGACAAVTGAG-SGIGLEICRAFAASGARLILIDREAAALDRAAQELG--AAVAARIVADVTDAEAMTAAAAEAE--A-V 83 (254)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--GGEEEEEECCTTCHHHHHHHHHHHH--H-H
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--ccceeEEEEecCCHHHHHHHHHHHH--h-h
Confidence 46788888865 4445444 4458899999999887766655542 256 889999877542222222221 1 2
Q ss_pred CCccEEEEcC
Q 023482 216 SGFAKVVANI 225 (281)
Q Consensus 216 ~~~d~Vi~n~ 225 (281)
+..|++|.|.
T Consensus 84 ~~id~li~~A 93 (254)
T 2wsb_A 84 APVSILVNSA 93 (254)
T ss_dssp SCCCEEEECC
T ss_pred CCCcEEEECC
Confidence 5689999874
No 493
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=89.67 E-value=0.96 Score=38.25 Aligned_cols=79 Identities=16% Similarity=0.212 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEcCccccccccchhhHHHhhcC
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~~l~~a~~~~~~~---~~v~~~~gD~~~~~~~d~~~d~v~~~~~ 214 (281)
.++++|=.|++.|. ++..+++.|++|+.++.+++.++.+.+.+... ..+.++.+|+.+...- ..++ ..
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~---~~~~---~~ 82 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGC---QDVI---EK 82 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHH---HHHH---HH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHH---HHHH---Hh
Confidence 46788888876543 34445556899999999998877666554321 3677888898764321 1222 23
Q ss_pred CCCccEEEEcC
Q 023482 215 SSGFAKVVANI 225 (281)
Q Consensus 215 ~~~~d~Vi~n~ 225 (281)
.+..|++|.|.
T Consensus 83 ~g~id~lv~nA 93 (267)
T 3t4x_A 83 YPKVDILINNL 93 (267)
T ss_dssp CCCCSEEEECC
T ss_pred cCCCCEEEECC
Confidence 46789999874
No 494
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=89.66 E-value=0.35 Score=44.56 Aligned_cols=64 Identities=25% Similarity=0.384 Sum_probs=44.5
Q ss_pred ccccCCHHHHH--------HHHHHhcCCCCCEEEEEcCCccHHHHHHHHc----C---CEEEEEeCCHHHHHHHHHHhc
Q 023482 121 QHYMLNSEIND--------QLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA----G---ATVLAIEKDQHMVGLVRERFA 184 (281)
Q Consensus 121 ~~~~~~~~~~~--------~l~~~l~~~~~~~VLDiGcG~G~~t~~la~~----~---~~v~gvD~s~~~l~~a~~~~~ 184 (281)
.+|++.+++.. ++.+.........|+|+|+|.|.++..+... + .+++.||+|+.+.+.-++++.
T Consensus 109 GDFiTAPeiS~~FGe~la~~~~~~~~~~g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 187 (432)
T 4f3n_A 109 SDFVTAPELSPLFAQTLARPVAQALDASGTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLG 187 (432)
T ss_dssp -CCSSCGGGHHHHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHH
T ss_pred CCccCchhhhHHHHHHHHHHHHHHHHhcCCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHh
Confidence 57999877532 2333222222468999999999988887652 2 389999999998877776664
No 495
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=89.47 E-value=0.35 Score=41.52 Aligned_cols=83 Identities=14% Similarity=0.144 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCccH---HHHHHHHcCCEEEEEeCCHH-------HHHHHHHHhcC-CCCeEEEEcCccccccccchhhHH
Q 023482 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQH-------MVGLVRERFAS-IDQLKVLQEDFVKCHIRSHMLSLF 209 (281)
Q Consensus 141 ~~~~VLDiGcG~G~---~t~~la~~~~~v~gvD~s~~-------~l~~a~~~~~~-~~~v~~~~gD~~~~~~~d~~~d~v 209 (281)
.++++|=.|++.|. ++..|++.|++|+.++.+++ .++.+.+.+.. ..++.++.+|+.+..--...++.+
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 87 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKT 87 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 46789988877663 44455556899999999865 23333333322 247899999998754333333332
Q ss_pred HhhcCCCCccEEEEcC
Q 023482 210 ERRKSSSGFAKVVANI 225 (281)
Q Consensus 210 ~~~~~~~~~d~Vi~n~ 225 (281)
. ...+..|++|.|.
T Consensus 88 ~--~~~g~id~lvnnA 101 (285)
T 3sc4_A 88 V--EQFGGIDICVNNA 101 (285)
T ss_dssp H--HHHSCCSEEEECC
T ss_pred H--HHcCCCCEEEECC
Confidence 2 2235789999874
No 496
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=89.46 E-value=0.65 Score=45.22 Aligned_cols=33 Identities=27% Similarity=0.184 Sum_probs=25.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHc------------C--CEEEEEeCCH
Q 023482 141 EGDIVLEIGPGTGSLTNVLLNA------------G--ATVLAIEKDQ 173 (281)
Q Consensus 141 ~~~~VLDiGcG~G~~t~~la~~------------~--~~v~gvD~s~ 173 (281)
+.-+|+|+|.|+|+..+.+.+. . .+++++|..|
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p 104 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYP 104 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSC
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCC
Confidence 3458999999999987776542 1 3799999944
No 497
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=89.38 E-value=3.6 Score=30.33 Aligned_cols=72 Identities=15% Similarity=0.188 Sum_probs=45.5
Q ss_pred CEEEEEcCCccHHHHHHH----HcCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCCc
Q 023482 143 DIVLEIGPGTGSLTNVLL----NAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGF 218 (281)
Q Consensus 143 ~~VLDiGcG~G~~t~~la----~~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~ 218 (281)
.+|+=+|+ |.++..++ +.+.+|+.+|.+++.++.++... .+.++.+|..+... +.. .....+
T Consensus 5 m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~----~~~~~~~d~~~~~~-------l~~-~~~~~~ 70 (140)
T 1lss_A 5 MYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI----DALVINGDCTKIKT-------LED-AGIEDA 70 (140)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----SSEEEESCTTSHHH-------HHH-TTTTTC
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc----CcEEEEcCCCCHHH-------HHH-cCcccC
Confidence 57888876 55555444 34789999999998877665432 45677888654321 100 112467
Q ss_pred cEEEEcCCCc
Q 023482 219 AKVVANIPFN 228 (281)
Q Consensus 219 d~Vi~n~P~~ 228 (281)
|+|+...|..
T Consensus 71 d~vi~~~~~~ 80 (140)
T 1lss_A 71 DMYIAVTGKE 80 (140)
T ss_dssp SEEEECCSCH
T ss_pred CEEEEeeCCc
Confidence 9988887754
No 498
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=89.28 E-value=0.47 Score=38.10 Aligned_cols=45 Identities=16% Similarity=0.248 Sum_probs=35.0
Q ss_pred hcCCCCCEEEEEcC--CccHHHHHHHHc-CCEEEEEeCCHHHHHHHHH
Q 023482 137 AAVQEGDIVLEIGP--GTGSLTNVLLNA-GATVLAIEKDQHMVGLVRE 181 (281)
Q Consensus 137 l~~~~~~~VLDiGc--G~G~~t~~la~~-~~~v~gvD~s~~~l~~a~~ 181 (281)
..+.++++||..|+ |.|..+..++.. |++|+++|.+++..+.+++
T Consensus 34 ~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~ 81 (198)
T 1pqw_A 34 GRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR 81 (198)
T ss_dssp SCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT
T ss_pred hCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 45678899999994 566666666654 8899999999988877653
No 499
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=89.26 E-value=1.1 Score=36.73 Aligned_cols=73 Identities=19% Similarity=0.174 Sum_probs=47.9
Q ss_pred EEEEcCCccHHHHHHHH----cCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEcCccccccccchhhHHHhhcCCCCccE
Q 023482 145 VLEIGPGTGSLTNVLLN----AGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAK 220 (281)
Q Consensus 145 VLDiGcG~G~~t~~la~----~~~~v~gvD~s~~~l~~a~~~~~~~~~v~~~~gD~~~~~~~d~~~d~v~~~~~~~~~d~ 220 (281)
|+=+|+ |.++..+++ .+.+|+.+|.+++.++...... ++.++.||+.+...- .. ..-...|.
T Consensus 3 iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~----~~~~i~gd~~~~~~l-------~~-a~i~~ad~ 68 (218)
T 3l4b_C 3 VIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL----KATIIHGDGSHKEIL-------RD-AEVSKNDV 68 (218)
T ss_dssp EEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS----SSEEEESCTTSHHHH-------HH-HTCCTTCE
T ss_pred EEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc----CCeEEEcCCCCHHHH-------Hh-cCcccCCE
Confidence 555554 666666655 4789999999999887765432 467899998764311 10 12356788
Q ss_pred EEEcCCCcccH
Q 023482 221 VVANIPFNIST 231 (281)
Q Consensus 221 Vi~n~P~~~~~ 231 (281)
|+...+-....
T Consensus 69 vi~~~~~d~~n 79 (218)
T 3l4b_C 69 VVILTPRDEVN 79 (218)
T ss_dssp EEECCSCHHHH
T ss_pred EEEecCCcHHH
Confidence 88877654433
No 500
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=89.23 E-value=1 Score=40.15 Aligned_cols=51 Identities=18% Similarity=0.205 Sum_probs=37.7
Q ss_pred HHHHhcCC-CCCEEEEEcCCc-cHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHh
Q 023482 133 LAAAAAVQ-EGDIVLEIGPGT-GSLTNVLLNA-GATVLAIEKDQHMVGLVRERF 183 (281)
Q Consensus 133 l~~~l~~~-~~~~VLDiGcG~-G~~t~~la~~-~~~v~gvD~s~~~l~~a~~~~ 183 (281)
.+....+. ++++||=+|+|. |..+..+++. |++|++++.+++-++.+++.+
T Consensus 178 al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l 231 (366)
T 1yqd_A 178 PLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF 231 (366)
T ss_dssp HHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS
T ss_pred HHHhcCcCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc
Confidence 34445666 889999999763 5566666665 889999999998887776444
Done!