Your job contains 1 sequence.
>023488
MVSKRQREARKRFKEVHPELFPKPEPTAPKDPSEKKKKKSSKFKRKKAESKDPNRNEKSM
KRVFTRHPLRVPGMKPGESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPS
KNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYP
KGGCCKICGGVTHLARDCPNKGIQGFTASSKQAMAGGERPTGQVTKFTSGDDLLDDFLTE
DANIGNKDKSSIAKVDSTSDSTNAKVKQKKKQGSKVVNFVG
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023488
(281 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2156647 - symbol:AT5G52380 species:3702 "Arabi... 769 2.4e-76 1
WB|WBGene00017210 - symbol:F07E5.5 species:6239 "Caenorha... 280 9.4e-27 2
POMBASE|SPAC683.02c - symbol:SPAC683.02c "zf-CCHC type zi... 285 4.6e-25 1
ZFIN|ZDB-GENE-031030-9 - symbol:zcchc9 "zinc finger, CCHC... 278 2.6e-24 1
UNIPROTKB|E1BZR6 - symbol:ZCCHC9 "Uncharacterized protein... 273 8.7e-24 1
UNIPROTKB|F1RF07 - symbol:ZCCHC9 "Uncharacterized protein... 269 2.3e-23 1
UNIPROTKB|F6V033 - symbol:ZCCHC9 "Uncharacterized protein... 268 2.9e-23 1
UNIPROTKB|Q8N567 - symbol:ZCCHC9 "Zinc finger CCHC domain... 263 1.0e-22 1
UNIPROTKB|F1ML79 - symbol:ZCCHC9 "Uncharacterized protein... 260 2.1e-22 1
RGD|1307450 - symbol:Zcchc9 "zinc finger, CCHC domain con... 257 4.3e-22 1
MGI|MGI:1916335 - symbol:Zcchc9 "zinc finger, CCHC domain... 253 1.1e-21 1
UNIPROTKB|G5E6N6 - symbol:G5E6N6 "Uncharacterized protein... 236 7.2e-20 1
FB|FBgn0034802 - symbol:CG3800 species:7227 "Drosophila m... 212 2.5e-17 1
SGD|S000005199 - symbol:GIS2 "Translational activator for... 196 1.3e-15 1
CGD|CAL0002417 - symbol:GIS2 species:5476 "Candida albica... 195 1.6e-15 1
UNIPROTKB|Q59YJ9 - symbol:GIS2 "Putative uncharacterized ... 195 1.6e-15 1
ASPGD|ASPL0000028407 - symbol:AN5111 species:162425 "Emer... 187 1.1e-14 1
POMBASE|SPAC13D6.02c - symbol:byr3 "zinc finger protein B... 182 3.8e-14 1
TAIR|locus:2135139 - symbol:CSDP1 "cold shock domain prot... 182 6.0e-14 1
DICTYBASE|DDB_G0293328 - symbol:DDB_G0293328 "Cellular nu... 180 6.2e-14 1
TAIR|locus:2079859 - symbol:AT3G43590 species:3702 "Arabi... 182 3.5e-13 1
UNIPROTKB|G4N4A8 - symbol:MGG_05948 "Zinc knuckle domain-... 169 9.1e-13 1
WB|WBGene00019537 - symbol:K08D12.3 species:6239 "Caenorh... 168 1.2e-12 1
UNIPROTKB|O42395 - symbol:CNBP "Cellular nucleic acid-bin... 167 1.5e-12 1
UNIPROTKB|E2RPD7 - symbol:CNBP "Uncharacterized protein" ... 164 3.1e-12 1
UNIPROTKB|F8WFK2 - symbol:Cnbp "Cellular nucleic acid-bin... 164 3.1e-12 1
MGI|MGI:88431 - symbol:Cnbp "cellular nucleic acid bindin... 163 3.9e-12 1
UNIPROTKB|B4DP17 - symbol:CNBP "cDNA FLJ61146, highly sim... 163 3.9e-12 1
ASPGD|ASPL0000040986 - symbol:AN9093 species:162425 "Emer... 167 4.3e-12 1
UNIPROTKB|P62633 - symbol:CNBP "Cellular nucleic acid-bin... 161 6.4e-12 1
UNIPROTKB|Q4R501 - symbol:Q4R501 "Brain cDNA, clone: QnpA... 161 6.4e-12 1
UNIPROTKB|Q5R5R5 - symbol:CNBP "Cellular nucleic acid-bin... 161 6.4e-12 1
RGD|621807 - symbol:Cnbp "CCHC-type zinc finger, nucleic ... 161 6.4e-12 1
UNIPROTKB|P62634 - symbol:Cnbp "Cellular nucleic acid-bin... 161 6.4e-12 1
UNIPROTKB|Q3T0Q6 - symbol:CNBP "Cellular nucleic acid-bin... 161 6.4e-12 1
UNIPROTKB|F1N8C2 - symbol:CNBP "Cellular nucleic acid-bin... 161 6.4e-12 1
ZFIN|ZDB-GENE-030131-5045 - symbol:cnbpa "CCHC-type zinc ... 155 2.8e-11 1
UNIPROTKB|J9NRQ2 - symbol:ZCCHC13 "Uncharacterized protei... 150 1.1e-10 1
UNIPROTKB|F1NI84 - symbol:CNBP "Cellular nucleic acid-bin... 146 3.4e-10 1
UNIPROTKB|G4MRA3 - symbol:MGG_13778 "Zinc finger protein ... 156 3.6e-10 1
ZFIN|ZDB-GENE-030131-7782 - symbol:cnbpb "CCHC-type zinc ... 157 4.6e-10 1
UNIPROTKB|G3MZ41 - symbol:ZCCHC13 "Uncharacterized protei... 142 9.9e-10 1
TAIR|locus:2005719 - symbol:AT1G75560 species:3702 "Arabi... 155 1.2e-09 1
UNIPROTKB|Q8WW36 - symbol:ZCCHC13 "Zinc finger CCHC domai... 141 1.3e-09 1
UNIPROTKB|Q65XV7 - symbol:P0016H04.11 "Os05g0111000 prote... 164 1.3e-09 1
TAIR|locus:2827810 - symbol:CSP3 "cold shock domain prote... 143 8.1e-08 1
TAIR|locus:2057295 - symbol:AT2G12880 species:3702 "Arabi... 125 9.2e-08 1
TAIR|locus:2183607 - symbol:AT5G36240 species:3702 "Arabi... 140 1.1e-07 1
WB|WBGene00001599 - symbol:glh-2 species:6239 "Caenorhabd... 141 1.0e-06 1
UNIPROTKB|Q966L9 - symbol:glh-2 "ATP-dependent RNA helica... 141 1.0e-06 1
WB|WBGene00001601 - symbol:glh-4 species:6239 "Caenorhabd... 141 1.2e-06 1
WB|WBGene00001598 - symbol:glh-1 species:6239 "Caenorhabd... 138 1.7e-06 1
UNIPROTKB|P34689 - symbol:glh-1 "ATP-dependent RNA helica... 138 1.7e-06 1
POMBASE|SPBP35G2.08c - symbol:air1 "zinc knuckle TRAMP co... 125 1.3e-05 1
UNIPROTKB|G4MQ81 - symbol:MGG_09256 "Uncharacterized prot... 127 2.8e-05 1
TAIR|locus:2149234 - symbol:AT5G20220 species:3702 "Arabi... 121 5.9e-05 1
WB|WBGene00043995 - symbol:F40F12.9 species:6239 "Caenorh... 96 0.00017 1
POMBASE|SPCC962.06c - symbol:bpb1 "zinc finger splicing f... 89 0.00060 2
>TAIR|locus:2156647 [details] [associations]
symbol:AT5G52380 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 EMBL:CP002688 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 EMBL:AB019226 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR025836 Pfam:PF14392 EMBL:BT025034 IPI:IPI00544651
RefSeq:NP_200051.1 UniGene:At.29618 ProteinModelPortal:Q9FHC2
SMR:Q9FHC2 PRIDE:Q9FHC2 EnsemblPlants:AT5G52380.1 GeneID:835314
KEGG:ath:AT5G52380 TAIR:At5g52380 InParanoid:Q9FHC2 OMA:KLCYNCG
PhylomeDB:Q9FHC2 ProtClustDB:CLSN2686088 Genevestigator:Q9FHC2
Uniprot:Q9FHC2
Length = 268
Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
Identities = 153/283 (54%), Positives = 183/283 (64%)
Query: 1 MVSKRQREARKRFKEVHPELFPKPEPTXXXXXXXXXXXXXXXXXXX-XXXXXXPNRNEKS 59
MV++R+R A+KR+KE +PELFPK EPT P R S
Sbjct: 1 MVNQRRRLAQKRYKEANPELFPKAEPTPPKDPNKKKKKKSLFKKKKPGSSTDRPQRTGSS 60
Query: 60 MKRVFTRHPLRVPGMKPGESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCP 119
TRHPLRVPGMKPGE CFIC +K HIAK CP K+EWE+NKICL CRRRGH+LKNCP
Sbjct: 61 -----TRHPLRVPGMKPGEGCFICHSKTHIAKLCPEKSEWERNKICLQCRRRGHSLKNCP 115
Query: 120 SKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIY 179
KN+E+ KLCYNCG GHSL+ CP P++DGGTKFASCFICK QGH+SKNCP+N HGIY
Sbjct: 116 EKNNESSEKKLCYNCGDTGHSLSHCPYPMEDGGTKFASCFICKGQGHISKNCPENKHGIY 175
Query: 180 PKGGCCKICGGVTHLARDCPNKGIQGFTASSKQAMAGGERPTGQVTKFTSGDDLLDDFLT 239
P GGCCK+CG V HL +DCP+K Q +A K+ P G++TKF SGDDL DDF T
Sbjct: 176 PMGGCCKVCGSVAHLVKDCPDKFNQE-SAQPKKTSRFDATPRGKLTKF-SGDDLEDDF-T 232
Query: 240 EDANIGNKDKSSIAKVDSTSDST-NAXXXXXXXXXXXXXNFVG 281
E+ KSS K++++ DS N+ NFVG
Sbjct: 233 EEP------KSS-KKINTSDDSAQNSVEVKKKKQGPKIVNFVG 268
>WB|WBGene00017210 [details] [associations]
symbol:F07E5.5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0006898
GO:GO:0040010 GO:GO:0046872 GO:GO:0008270 GO:GO:0040011
GO:GO:0003676 GO:GO:0040035 eggNOG:COG5082 Gene3D:4.10.60.10
SUPFAM:SSF57756 EMBL:FO080110 PIR:T34410 RefSeq:NP_494168.1
ProteinModelPortal:P91223 SMR:P91223 STRING:P91223 PaxDb:P91223
EnsemblMetazoa:F07E5.5 GeneID:173564 KEGG:cel:CELE_F07E5.5
UCSC:F07E5.5 CTD:173564 WormBase:F07E5.5
GeneTree:ENSGT00510000047308 HOGENOM:HOG000021839 InParanoid:P91223
OMA:INDWRAA NextBio:880195 Uniprot:P91223
Length = 384
Score = 280 (103.6 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
Identities = 45/100 (45%), Positives = 63/100 (63%)
Query: 105 CLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQ 164
C CR GH L +CP +N + S +C+ CG HS+ +C + G +A+CF+CK+
Sbjct: 231 CFHCREPGHRLADCPKRNSSS-SDGVCFKCGSMEHSIHECKKKGVKG-FPYATCFVCKQV 288
Query: 165 GHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDCPNKGIQ 204
GH+S++C QN +G+YP GGCC +CG THL RDCP Q
Sbjct: 289 GHISRDCHQNVNGVYPDGGCCNVCGANTHLRRDCPELAAQ 328
Score = 117 (46.2 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 23/85 (27%), Positives = 41/85 (48%)
Query: 121 KNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYP 180
+ D+ + C++C + GH LA CP+ ++ + CF C H C + +P
Sbjct: 221 RQDQKITGSACFHCREPGHRLADCPK--RNSSSSDGVCFKCGSMEHSIHECKKKGVKGFP 278
Query: 181 KGGCCKICGGVTHLARDCPNKGIQG 205
C +C V H++RDC ++ + G
Sbjct: 279 YATCF-VCKQVGHISRDC-HQNVNG 301
Score = 36 (17.7 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 6 QREARKRFKEVHPELFPKPEP 26
+R+ R E PE +PEP
Sbjct: 72 ERKERAERGEPEPEATGEPEP 92
>POMBASE|SPAC683.02c [details] [associations]
symbol:SPAC683.02c "zf-CCHC type zinc finger protein"
species:4896 "Schizosaccharomyces pombe" [GO:0005730 "nucleolus"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 PomBase:SPAC683.02c
EMBL:CU329670 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
PIR:T50246 RefSeq:NP_594481.1 EnsemblFungi:SPAC683.02c.1
GeneID:2543491 KEGG:spo:SPAC683.02c HOGENOM:HOG000059608
OMA:FICHENG OrthoDB:EOG4P8JTN NextBio:20804503 Uniprot:Q9HFF2
Length = 218
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 48/98 (48%), Positives = 61/98 (62%)
Query: 101 KNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFI 160
++K C CR++GH +++CP D + +C+ CG HSL C + G KFA CFI
Sbjct: 75 RDKFCFACRQQGHIVQDCPEAKD---NVSICFRCGSKEHSLNACSKK---GPLKFAKCFI 128
Query: 161 CKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
C E GHLS C QN G+YPKGGCCK C V HLA+DC
Sbjct: 129 CHENGHLSGQCEQNPKGLYPKGGCCKFCSSVHHLAKDC 166
Score = 150 (57.9 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 46/165 (27%), Positives = 64/165 (38%)
Query: 10 RKRFKEVHP-ELFPKPEPTXXXXXXXXXXXXXXXXXXXXXXXXXPNRNEKSMKRVFTRHP 68
RKRF E P E +P R +K KR R
Sbjct: 10 RKRFLEATPYESKVLEQPKNSSNTNEESSSQDNMKASFGSSKRYDERQKK--KRSEYRRL 67
Query: 69 LRVPGMKPGESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETEST 128
R+ + CF C+ + HI + CP +A+ + IC C + H+L C SK +
Sbjct: 68 RRINQRNRDKFCFACRQQGHIVQDCP-EAK-DNVSICFRCGSKEHSLNAC-SKKGPLKFA 124
Query: 129 KLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQ 173
K C+ C + GH QC Q + K C C HL+K+C Q
Sbjct: 125 K-CFICHENGHLSGQCEQNPKGLYPKGGCCKFCSSVHHLAKDCDQ 168
>ZFIN|ZDB-GENE-031030-9 [details] [associations]
symbol:zcchc9 "zinc finger, CCHC domain containing 9"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 ZFIN:ZDB-GENE-031030-9 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR025836 Pfam:PF14392 HOGENOM:HOG000059608 CTD:84240
HOVERGEN:HBG056034 OrthoDB:EOG49W2G3 EMBL:BC049028 IPI:IPI00484605
RefSeq:NP_938184.1 UniGene:Dr.79609 ProteinModelPortal:Q7ZUI6
STRING:Q7ZUI6 GeneID:386639 KEGG:dre:386639 InParanoid:Q7ZUI6
NextBio:20813967 ArrayExpress:Q7ZUI6 Uniprot:Q7ZUI6
Length = 256
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 45/103 (43%), Positives = 60/103 (58%)
Query: 100 EKNKICLVCRRRGHTLKNCP-SKNDETESTKLCYNCGQAGHSLAQCPQPLQD--GGTKFA 156
+ N IC CR+ GH L +CP + NDE +CY CG H + +C + G +A
Sbjct: 112 KSNMICFNCRKPGHGLADCPEANNDEEMGRGICYRCGSTEHEIQRCRAKVDPAMGNYPYA 171
Query: 157 SCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDCP 199
CF+C + GHLSK CP N G+Y GGCC++CG V H +DCP
Sbjct: 172 KCFVCGQTGHLSKACPDNPKGLYAAGGCCRVCGSVEHFQKDCP 214
Score = 140 (54.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 36/129 (27%), Positives = 58/129 (44%)
Query: 81 FICKAKEHIAKHCPMKAEWE-KNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGH 139
++ + + + KH P+ E + + RR +K +K +S +C+NC + GH
Sbjct: 70 YLKQTGQTLQKHTPVDLRGEVETALKKDARRENRRIKRQNTK----KSNMICFNCRKPGH 125
Query: 140 SLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQN---AHGIYPKGGCCKICGGVTHLAR 196
LA CP+ D C+ C H + C A G YP C +CG HL++
Sbjct: 126 GLADCPEANNDEEMGRGICYRCGSTEHEIQRCRAKVDPAMGNYPYAKCF-VCGQTGHLSK 184
Query: 197 DCPN--KGI 203
CP+ KG+
Sbjct: 185 ACPDNPKGL 193
Score = 123 (48.4 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 33/126 (26%), Positives = 49/126 (38%)
Query: 57 EKSMKRVFTRHPLRVPGMKPGES---CFICKAKEHIAKHCPMKAEWEK--NKICLVCRRR 111
E ++K+ R R+ +S CF C+ H CP E+ IC C
Sbjct: 91 ETALKKDARRENRRIKRQNTKKSNMICFNCRKPGHGLADCPEANNDEEMGRGICYRCGST 150
Query: 112 GHTLKNCPSKNDETEST---KLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLS 168
H ++ C +K D C+ CGQ GH CP + C +C H
Sbjct: 151 EHEIQRCRAKVDPAMGNYPYAKCFVCGQTGHLSKACPDNPKGLYAAGGCCRVCGSVEHFQ 210
Query: 169 KNCPQN 174
K+CP++
Sbjct: 211 KDCPEH 216
>UNIPROTKB|E1BZR6 [details] [associations]
symbol:ZCCHC9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010923 "negative
regulation of phosphatase activity" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 GO:GO:0010923 CTD:84240 OMA:DSQEVRE
GeneTree:ENSGT00510000047308 EMBL:AADN02047870 IPI:IPI00571897
RefSeq:XP_424900.1 UniGene:Gga.34920 Ensembl:ENSGALT00000025157
GeneID:427320 KEGG:gga:427320 NextBio:20828598 Uniprot:E1BZR6
Length = 235
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 49/137 (35%), Positives = 73/137 (53%)
Query: 96 KAEWEKNK-ICLVCRRRGHTLKNCPSKNDETE-STKLCYNCGQAGHSLAQCPQPLQD--G 151
+ E KN +C CR GH + +CP+ + + T +CY CG H + +C + G
Sbjct: 85 RQEARKNAMVCFHCREPGHGVADCPAVLESQDMGTGICYRCGSTEHDIGKCKAKIDPAVG 144
Query: 152 GTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDCP-NKGIQGFTASS 210
+A CFIC E GHLS++CP N G+Y +GGCC++CG V H +DCP N+ + T
Sbjct: 145 AFPYAKCFICGEMGHLSRSCPDNPKGLYAEGGCCRLCGSVEHYRKDCPENQNLDQVTVGR 204
Query: 211 -KQAMAGGERPTGQVTK 226
M+ + T + K
Sbjct: 205 WATGMSADDEETTETPK 221
Score = 125 (49.1 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 33/122 (27%), Positives = 45/122 (36%)
Query: 58 KSMKRVFTRHPLRVPGMKPGESCFICKAKEHIAKHCPMKAEWEK--NKICLVCRRRGHTL 115
K +R R R K CF C+ H CP E + IC C H +
Sbjct: 73 KKDRRRENRRLRRQEARKNAMVCFHCREPGHGVADCPAVLESQDMGTGICYRCGSTEHDI 132
Query: 116 KNCPSKNDETEST---KLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCP 172
C +K D C+ CG+ GH CP + + C +C H K+CP
Sbjct: 133 GKCKAKIDPAVGAFPYAKCFICGEMGHLSRSCPDNPKGLYAEGGCCRLCGSVEHYRKDCP 192
Query: 173 QN 174
+N
Sbjct: 193 EN 194
>UNIPROTKB|F1RF07 [details] [associations]
symbol:ZCCHC9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0010923 "negative regulation of phosphatase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0010923 CTD:84240 OMA:DSQEVRE GeneTree:ENSGT00510000047308
EMBL:CU928538 RefSeq:NP_001231149.1 UniGene:Ssc.1803
Ensembl:ENSSSCT00000015433 GeneID:100514154 KEGG:ssc:100514154
Uniprot:F1RF07
Length = 270
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 44/104 (42%), Positives = 62/104 (59%)
Query: 100 EKNK-ICLVCRRRGHTLKNCPSKNDETE-STKLCYNCGQAGHSLAQCPQPLQD--GGTKF 155
+KN +C CR+ GH + +CP+ + E T +CY CG H + +C + G F
Sbjct: 123 KKNAMVCFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEIIKCKAQVDPALGEFPF 182
Query: 156 ASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDCP 199
A CF+C E GHLS++CP N G+Y GGCC++CG V H +DCP
Sbjct: 183 AKCFVCGEMGHLSRSCPDNPKGLYADGGCCRLCGSVEHFKKDCP 226
Score = 133 (51.9 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 32/100 (32%), Positives = 48/100 (48%)
Query: 109 RRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLS 168
RR G LK +K ++ +C++C Q GH +A CP L++ C+ C H
Sbjct: 111 RREGRRLKRQAAK----KNAMVCFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEI 166
Query: 169 KNCPQN---AHGIYPKGGCCKICGGVTHLARDCPN--KGI 203
C A G +P C +CG + HL+R CP+ KG+
Sbjct: 167 IKCKAQVDPALGEFPFAKCF-VCGEMGHLSRSCPDNPKGL 205
Score = 115 (45.5 bits), Expect = 0.00014, P = 0.00014
Identities = 32/105 (30%), Positives = 44/105 (41%)
Query: 80 CFICKAKEHIAKHCPMKAEWEK--NKICLVCRRRGHTLKNCPSKND----ETESTKLCYN 133
CF C+ H CP E ++ IC C H + C ++ D E K C+
Sbjct: 129 CFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEIIKCKAQVDPALGEFPFAK-CFV 187
Query: 134 CGQAGHSLAQCPQ-P---LQDGGTKFASCFICKEQGHLSKNCPQN 174
CG+ GH CP P DGG C +C H K+CP++
Sbjct: 188 CGEMGHLSRSCPDNPKGLYADGGC----CRLCGSVEHFKKDCPES 228
>UNIPROTKB|F6V033 [details] [associations]
symbol:ZCCHC9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
CTD:84240 OMA:DSQEVRE GeneTree:ENSGT00510000047308
EMBL:AAEX03002099 RefSeq:XP_536305.1 Ensembl:ENSCAFT00000013818
GeneID:479161 KEGG:cfa:479161 Uniprot:F6V033
Length = 271
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 43/104 (41%), Positives = 62/104 (59%)
Query: 100 EKNK-ICLVCRRRGHTLKNCPSKNDETE-STKLCYNCGQAGHSLAQCPQPLQD--GGTKF 155
+KN +C CR+ GH + +CP+ + + T +CY CG H + +C + G F
Sbjct: 124 KKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPF 183
Query: 156 ASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDCP 199
A CF+C E GHLS++CP N G+Y GGCC++CG V H +DCP
Sbjct: 184 AKCFVCGEMGHLSRSCPDNPKGLYADGGCCRLCGSVEHFKKDCP 227
Score = 134 (52.2 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 35/102 (34%), Positives = 50/102 (49%)
Query: 109 RRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPL--QDGGTKFASCFICKEQGH 166
RR G LK +K ++ +C++C + GH +A CP L QD GT C+ C H
Sbjct: 112 RREGRRLKRQAAK----KNAMVCFHCRKPGHGIADCPAALENQDMGTGI--CYRCGSTEH 165
Query: 167 LSKNCPQN---AHGIYPKGGCCKICGGVTHLARDCPN--KGI 203
C A G +P C +CG + HL+R CP+ KG+
Sbjct: 166 EITKCKAKVDPALGEFPFAKCF-VCGEMGHLSRSCPDNPKGL 206
Score = 119 (46.9 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 33/105 (31%), Positives = 43/105 (40%)
Query: 80 CFICKAKEHIAKHCPMKAEWEK--NKICLVCRRRGHTLKNCPSKND----ETESTKLCYN 133
CF C+ H CP E + IC C H + C +K D E K C+
Sbjct: 130 CFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAK-CFV 188
Query: 134 CGQAGHSLAQCPQ-P---LQDGGTKFASCFICKEQGHLSKNCPQN 174
CG+ GH CP P DGG C +C H K+CP++
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGGC----CRLCGSVEHFKKDCPES 229
>UNIPROTKB|Q8N567 [details] [associations]
symbol:ZCCHC9 "Zinc finger CCHC domain-containing protein
9" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010923 "negative regulation of phosphatase activity"
evidence=IDA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
EMBL:CH471084 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0010923 HOGENOM:HOG000059608 EMBL:AK314160 EMBL:AL512712
EMBL:BC032736 IPI:IPI00410284 RefSeq:NP_001124507.1
RefSeq:NP_001124508.1 RefSeq:NP_115656.1 UniGene:Hs.15536
ProteinModelPortal:Q8N567 SMR:Q8N567 IntAct:Q8N567
PhosphoSite:Q8N567 DMDM:116242852 PaxDb:Q8N567 PRIDE:Q8N567
Ensembl:ENST00000254037 Ensembl:ENST00000380199
Ensembl:ENST00000407610 Ensembl:ENST00000438268 GeneID:84240
KEGG:hsa:84240 UCSC:uc003khi.3 CTD:84240 GeneCards:GC05P080597
HGNC:HGNC:25424 HPA:HPA038404 neXtProt:NX_Q8N567
PharmGKB:PA134931870 HOVERGEN:HBG056034 InParanoid:Q8N567
OMA:DSQEVRE OrthoDB:EOG49W2G3 PhylomeDB:Q8N567 GenomeRNAi:84240
NextBio:73713 Bgee:Q8N567 CleanEx:HS_ZCCHC9 Genevestigator:Q8N567
GermOnline:ENSG00000131732 Uniprot:Q8N567
Length = 271
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 44/104 (42%), Positives = 62/104 (59%)
Query: 100 EKNK-ICLVCRRRGHTLKNCPSKNDETE-STKLCYNCGQAGHSLAQCPQPLQD--GGTKF 155
+KN +C CR+ GH + +CP+ + + T +CY CG H + +C + G F
Sbjct: 124 KKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPF 183
Query: 156 ASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDCP 199
A CF+C E GHLS++CP N G+Y GG CK+CG V HL +DCP
Sbjct: 184 AKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCP 227
Score = 134 (52.2 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 35/102 (34%), Positives = 50/102 (49%)
Query: 109 RRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPL--QDGGTKFASCFICKEQGH 166
RR G LK +K ++ +C++C + GH +A CP L QD GT C+ C H
Sbjct: 112 RREGRRLKRQAAK----KNAMVCFHCRKPGHGIADCPAALENQDMGTGI--CYRCGSTEH 165
Query: 167 LSKNCPQN---AHGIYPKGGCCKICGGVTHLARDCPN--KGI 203
C A G +P C +CG + HL+R CP+ KG+
Sbjct: 166 EITKCKAKVDPALGEFPFAKCF-VCGEMGHLSRSCPDNPKGL 206
Score = 124 (48.7 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 34/105 (32%), Positives = 44/105 (41%)
Query: 80 CFICKAKEHIAKHCPMKAEWEK--NKICLVCRRRGHTLKNCPSKND----ETESTKLCYN 133
CF C+ H CP E + IC C H + C +K D E K C+
Sbjct: 130 CFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAK-CFV 188
Query: 134 CGQAGHSLAQCPQ-P---LQDGGTKFASCFICKEQGHLSKNCPQN 174
CG+ GH CP P DGG C +C HL K+CP++
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGG----GCKLCGSVEHLKKDCPES 229
>UNIPROTKB|F1ML79 [details] [associations]
symbol:ZCCHC9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
OMA:DSQEVRE GeneTree:ENSGT00510000047308 EMBL:DAAA02021025
IPI:IPI00689669 UniGene:Bt.61596 Ensembl:ENSBTAT00000006931
Uniprot:F1ML79
Length = 271
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 43/104 (41%), Positives = 62/104 (59%)
Query: 100 EKNK-ICLVCRRRGHTLKNCPSKNDETE-STKLCYNCGQAGHSLAQCPQPLQD--GGTKF 155
+KN +C CR+ GH + +CP+ + E T +CY CG H + +C + G F
Sbjct: 124 KKNAMVCFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEITKCKAKVDPALGEFPF 183
Query: 156 ASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDCP 199
A CF+C E GHLS++CP N G+Y GG C++CG V H+ +DCP
Sbjct: 184 AKCFVCGEMGHLSRSCPDNPKGLYADGGGCRLCGSVEHMKKDCP 227
Score = 135 (52.6 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 32/100 (32%), Positives = 48/100 (48%)
Query: 109 RRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLS 168
RR G LK +K ++ +C++C Q GH +A CP L++ C+ C H
Sbjct: 112 RREGRRLKRQAAK----KNAMVCFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEI 167
Query: 169 KNCPQN---AHGIYPKGGCCKICGGVTHLARDCPN--KGI 203
C A G +P C +CG + HL+R CP+ KG+
Sbjct: 168 TKCKAKVDPALGEFPFAKCF-VCGEMGHLSRSCPDNPKGL 206
Score = 125 (49.1 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 37/119 (31%), Positives = 49/119 (41%)
Query: 80 CFICKAKEHIAKHCPMKAEWEK--NKICLVCRRRGHTLKNCPSKND----ETESTKLCYN 133
CF C+ H CP E ++ IC C H + C +K D E K C+
Sbjct: 130 CFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAK-CFV 188
Query: 134 CGQAGHSLAQCPQ-P---LQDGGTKFASCFICKEQGHLSKNCP--QNAHGIYPKGGCCK 186
CG+ GH CP P DGG C +C H+ K+CP QN+ + G K
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGG----GCRLCGSVEHMKKDCPESQNSDRVVTVGRWAK 243
>RGD|1307450 [details] [associations]
symbol:Zcchc9 "zinc finger, CCHC domain containing 9"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010923 "negative regulation of phosphatase activity"
evidence=IEA;ISO] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 RGD:1307450 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0010923
EMBL:CH473955 HOGENOM:HOG000059608 CTD:84240 HOVERGEN:HBG056034
OMA:DSQEVRE OrthoDB:EOG49W2G3 GeneTree:ENSGT00510000047308
EMBL:BC083695 IPI:IPI00555221 RefSeq:NP_001013174.1
UniGene:Rn.94285 Ensembl:ENSRNOT00000020111 GeneID:309986
KEGG:rno:309986 UCSC:RGD:1307450 InParanoid:Q5XII6 NextBio:661527
Genevestigator:Q5XII6 Uniprot:Q5XII6
Length = 271
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 43/104 (41%), Positives = 61/104 (58%)
Query: 100 EKNK-ICLVCRRRGHTLKNCPSKNDETE-STKLCYNCGQAGHSLAQCPQPLQD--GGTKF 155
+KN +C CR+ GH + +CP+ + + T +CY CG H + +C + G F
Sbjct: 124 KKNAMVCFHCRQPGHGIADCPAVLESQDMGTGICYRCGSTEHEMTKCRANVDPALGEFPF 183
Query: 156 ASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDCP 199
A CF+C E GHLS++CP N G+Y GG CK+CG V H +DCP
Sbjct: 184 AKCFVCGEMGHLSRSCPDNTKGVYADGGGCKLCGSVEHFKKDCP 227
Score = 144 (55.7 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 37/102 (36%), Positives = 51/102 (50%)
Query: 109 RRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPL--QDGGTKFASCFICKEQGH 166
RR G LK +K ++ +C++C Q GH +A CP L QD GT C+ C H
Sbjct: 112 RREGRRLKRQAAK----KNAMVCFHCRQPGHGIADCPAVLESQDMGTGI--CYRCGSTEH 165
Query: 167 LSKNCPQN---AHGIYPKGGCCKICGGVTHLARDCPN--KGI 203
C N A G +P C +CG + HL+R CP+ KG+
Sbjct: 166 EMTKCRANVDPALGEFPFAKCF-VCGEMGHLSRSCPDNTKGV 206
Score = 120 (47.3 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 29/101 (28%), Positives = 39/101 (38%)
Query: 80 CFICKAKEHIAKHCPMKAEWEK--NKICLVCRRRGHTLKNCPSKND----ETESTKLCYN 133
CF C+ H CP E + IC C H + C + D E K C+
Sbjct: 130 CFHCRQPGHGIADCPAVLESQDMGTGICYRCGSTEHEMTKCRANVDPALGEFPFAK-CFV 188
Query: 134 CGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQN 174
CG+ GH CP + C +C H K+CP+N
Sbjct: 189 CGEMGHLSRSCPDNTKGVYADGGGCKLCGSVEHFKKDCPEN 229
>MGI|MGI:1916335 [details] [associations]
symbol:Zcchc9 "zinc finger, CCHC domain containing 9"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0010923 "negative regulation of
phosphatase activity" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 MGI:MGI:1916335 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0010923 HOGENOM:HOG000059608 CTD:84240 HOVERGEN:HBG056034
EMBL:BC010687 EMBL:BC024496 IPI:IPI00122218 RefSeq:NP_663428.2
UniGene:Mm.52356 ProteinModelPortal:Q8R1J3 SMR:Q8R1J3
PhosphoSite:Q8R1J3 PRIDE:Q8R1J3 GeneID:69085 KEGG:mmu:69085
UCSC:uc007rkb.1 InParanoid:Q8R1J3 NextBio:328566 Bgee:Q8R1J3
CleanEx:MM_ZCCHC9 Genevestigator:Q8R1J3
GermOnline:ENSMUSG00000021621 Uniprot:Q8R1J3
Length = 273
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 42/103 (40%), Positives = 61/103 (59%)
Query: 100 EKNK-ICLVCRRRGHTLKNCPSKNDETE-STKLCYNCGQAGHSLAQCPQPLQD--GGTKF 155
+KN +C CR+ GH + +CP+ + + T +CY CG H +++C + G F
Sbjct: 124 KKNAMVCFHCRQPGHGIADCPAVLESQDMGTGICYRCGSTEHEMSKCRANVDPALGEFPF 183
Query: 156 ASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
A CF+C E GHLS++CP N G+Y GG CK+CG V H +DC
Sbjct: 184 AKCFVCGEMGHLSRSCPDNTKGVYADGGSCKLCGSVEHFKKDC 226
Score = 147 (56.8 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 39/110 (35%), Positives = 53/110 (48%)
Query: 109 RRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPL--QDGGTKFASCFICKEQGH 166
RR G LK +K ++ +C++C Q GH +A CP L QD GT C+ C H
Sbjct: 112 RREGRRLKRQAAK----KNAMVCFHCRQPGHGIADCPAVLESQDMGTGI--CYRCGSTEH 165
Query: 167 LSKNCPQN---AHGIYPKGGCCKICGGVTHLARDCPN--KGIQGFTASSK 211
C N A G +P C +CG + HL+R CP+ KG+ S K
Sbjct: 166 EMSKCRANVDPALGEFPFAKCF-VCGEMGHLSRSCPDNTKGVYADGGSCK 214
Score = 116 (45.9 bits), Expect = 0.00011, P = 0.00011
Identities = 29/101 (28%), Positives = 39/101 (38%)
Query: 80 CFICKAKEHIAKHCPMKAEWEK--NKICLVCRRRGHTLKNCPSKND----ETESTKLCYN 133
CF C+ H CP E + IC C H + C + D E K C+
Sbjct: 130 CFHCRQPGHGIADCPAVLESQDMGTGICYRCGSTEHEMSKCRANVDPALGEFPFAK-CFV 188
Query: 134 CGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQN 174
CG+ GH CP + SC +C H K+C +N
Sbjct: 189 CGEMGHLSRSCPDNTKGVYADGGSCKLCGSVEHFKKDCREN 229
>UNIPROTKB|G5E6N6 [details] [associations]
symbol:G5E6N6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
GeneTree:ENSGT00510000047308 EMBL:DAAA02018957
Ensembl:ENSBTAT00000064097 Uniprot:G5E6N6
Length = 252
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 45/103 (43%), Positives = 59/103 (57%)
Query: 100 EKNKICLVCRRRGHTLKNCPSKNDETE-STKLCYNCGQAGHSLAQCPQPLQD--GGTKFA 156
+KN IC CR+ GH + +CP+ + E T +CY CG C L G FA
Sbjct: 112 KKNAICFHCRQ-GHGIADCPAALENQEMGTGICYWCGST------CKVKLDPALGELPFA 164
Query: 157 SCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDCP 199
CF+C E GHLS++CP N G+Y GG C++CG V HL +DCP
Sbjct: 165 KCFVCGEMGHLSRSCPDNPKGLYADGGGCRLCGSVEHLKKDCP 207
Score = 109 (43.4 bits), Expect = 0.00062, P = 0.00062
Identities = 27/85 (31%), Positives = 40/85 (47%)
Query: 121 KNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYP 180
K + +C++C Q GH +A CP L++ C+ C G K A G P
Sbjct: 107 KRQAAKKNAICFHCRQ-GHGIADCPAALENQEMGTGICYWC---GSTCKVKLDPALGELP 162
Query: 181 KGGCCKICGGVTHLARDCPN--KGI 203
C +CG + HL+R CP+ KG+
Sbjct: 163 FAKCF-VCGEMGHLSRSCPDNPKGL 186
>FB|FBgn0034802 [details] [associations]
symbol:CG3800 species:7227 "Drosophila melanogaster"
[GO:0003676 "nucleic acid binding" evidence=ISS;NAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
EMBL:AE013599 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756 KO:K09250
GeneTree:ENSGT00510000047065 OMA:QCYNCGE EMBL:AY075371
EMBL:AY118596 RefSeq:NP_001188992.1 RefSeq:NP_611739.1
UniGene:Dm.5513 ProteinModelPortal:Q8T8R1 SMR:Q8T8R1
MINT:MINT-943666 STRING:Q8T8R1 PaxDb:Q8T8R1 PRIDE:Q8T8R1
EnsemblMetazoa:FBtr0071994 EnsemblMetazoa:FBtr0303464 GeneID:37646
KEGG:dme:Dmel_CG3800 UCSC:CG3800-RA FlyBase:FBgn0034802
InParanoid:Q8T8R1 OrthoDB:EOG40RXZ0 PhylomeDB:Q8T8R1
GenomeRNAi:37646 NextBio:804714 Bgee:Q8T8R1 Uniprot:Q8T8R1
Length = 165
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 47/131 (35%), Positives = 64/131 (48%)
Query: 73 GMKPG-ESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLC 131
GM+ E C+ C H A+ CP +AE C C GH K+C ++ T C
Sbjct: 49 GMRRNREKCYKCNQFGHFARACPEEAER-----CYRCNGIGHISKDCTQADNPT-----C 98
Query: 132 YNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGV 191
Y C + GH + CP+ + + G SC+ C GH+SKNCP+ + Y GC K G
Sbjct: 99 YRCNKTGHWVRNCPEAVNERGPTNVSCYKCNRTGHISKNCPETSKTCY---GCGK--SG- 152
Query: 192 THLARDCPNKG 202
HL R+C KG
Sbjct: 153 -HLRRECDEKG 162
>SGD|S000005199 [details] [associations]
symbol:GIS2 "Translational activator for mRNAs with internal
ribosome entry sites" species:4932 "Saccharomyces cerevisiae"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IDA] [GO:0003729 "mRNA binding"
evidence=IDA] [GO:0010494 "cytoplasmic stress granule"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0042788 "polysomal ribosome" evidence=IPI] [GO:0045182
"translation regulator activity" evidence=IDA] [GO:0045727
"positive regulation of translation" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 SGD:S000005199 GO:GO:0046872
GO:GO:0008270 GO:GO:0003729 EMBL:BK006947 GO:GO:0045182
GO:GO:0042788 GO:GO:0003697 eggNOG:COG5082 Gene3D:4.10.60.10
SUPFAM:SSF57756 GO:GO:0045727 EMBL:X96722 HOGENOM:HOG000186262
KO:K09250 GeneTree:ENSGT00510000047065 EMBL:Z71531 EMBL:AY558002
PIR:S63228 RefSeq:NP_014144.1 ProteinModelPortal:P53849 SMR:P53849
DIP:DIP-2669N IntAct:P53849 MINT:MINT-2732013 STRING:P53849
PaxDb:P53849 PeptideAtlas:P53849 EnsemblFungi:YNL255C GeneID:855466
KEGG:sce:YNL255C CYGD:YNL255c OMA:QCYNCGE OrthoDB:EOG4SJ8Q6
NextBio:979403 Genevestigator:P53849 GermOnline:YNL255C
Uniprot:P53849
Length = 153
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 42/130 (32%), Positives = 65/130 (50%)
Query: 78 ESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQA 137
++C++C H+A+ C + ++C C + GH +C T K CYNCG+
Sbjct: 4 KACYVCGKIGHLAEDC------DSERLCYNCNKPGHVQTDCTMPR--TVEFKQCYNCGET 55
Query: 138 GHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQ-NAHGIYPKGGCCKICGGVTHLAR 196
GH ++C +Q CF C + GH+S+ CP+ + K C K CGG H+A+
Sbjct: 56 GHVRSECT--VQ-------RCFNCNQTGHISRECPEPKKTSRFSKVSCYK-CGGPNHMAK 105
Query: 197 DCPNK-GIQG 205
DC + GI G
Sbjct: 106 DCMKEDGISG 115
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 38/121 (31%), Positives = 53/121 (43%)
Query: 80 CFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGH 139
C+ C H+ C M E K C C GH C + + C+NC Q GH
Sbjct: 25 CYNCNKPGHVQTDCTMPRTVEF-KQCYNCGETGHVRSEC--------TVQRCFNCNQTGH 75
Query: 140 SLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDCP 199
+CP+P + SC+ C H++K+C + GI G C CG H++RDC
Sbjct: 76 ISRECPEPKKTSRFSKVSCYKCGGPNHMAKDCMKE-DGI--SGLKCYTCGQAGHMSRDCQ 132
Query: 200 N 200
N
Sbjct: 133 N 133
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 34/98 (34%), Positives = 46/98 (46%)
Query: 78 ESCFICKAKEHIAKHCPMKAEWEK-NKI-CLVCRRRGHTLKNCPSKNDETESTKLCYNCG 135
+ CF C HI++ CP + + +K+ C C H K+C K D K CY CG
Sbjct: 65 QRCFNCNQTGHISRECPEPKKTSRFSKVSCYKCGGPNHMAKDC-MKEDGISGLK-CYTCG 122
Query: 136 QAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQ 173
QAGH C C+ C E GH+SK+CP+
Sbjct: 123 QAGHMSRDCQND--------RLCYNCNETGHISKDCPK 152
Score = 145 (56.1 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 28/96 (29%), Positives = 44/96 (45%)
Query: 105 CLVCRRRGHTLKNCPSKNDETESTKL-CYNCGQAGHSLAQCPQPLQDGGTKFASCFICKE 163
C C + GH + CP + +K+ CY CG H C +++ G C+ C +
Sbjct: 67 CFNCNQTGHISRECPEPKKTSRFSKVSCYKCGGPNHMAKDC---MKEDGISGLKCYTCGQ 123
Query: 164 QGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDCP 199
GH+S++C QN C C H+++DCP
Sbjct: 124 AGHMSRDC-QNDR-------LCYNCNETGHISKDCP 151
>CGD|CAL0002417 [details] [associations]
symbol:GIS2 species:5476 "Candida albicans" [GO:0070417
"cellular response to cold" evidence=IMP] [GO:0003676 "nucleic acid
binding" evidence=NAS] [GO:0071470 "cellular response to osmotic
stress" evidence=IMP] [GO:0035690 "cellular response to drug"
evidence=IMP] [GO:0042788 "polysomal ribosome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000747 "conjugation with cellular fusion"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IEA] [GO:0045727 "positive regulation of
translation" evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0045182
"translation regulator activity" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 CGD:CAL0002417
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0035690
EMBL:AACQ01000100 EMBL:AACQ01000097 GO:GO:0071470 GO:GO:0070417
eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 KO:K09250 RefSeq:XP_714599.1
RefSeq:XP_714730.1 ProteinModelPortal:Q59YJ9 STRING:Q59YJ9
GeneID:3643638 GeneID:3643744 KEGG:cal:CaO19.10692
KEGG:cal:CaO19.3182 Uniprot:Q59YJ9
Length = 175
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 44/131 (33%), Positives = 60/131 (45%)
Query: 79 SCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAG 138
+C+ C H+A C ++ ++C C + GH +CP T K CY+CG G
Sbjct: 8 TCYKCGEVGHVADDCQ-----QEERLCYNCHKPGHESNDCPDPKQNT--AKQCYSCGDVG 60
Query: 139 HSLAQCPQPLQDGGTKFASCFICKEQGHLSKNC---PQNAHGI----YPKGGC----CKI 187
H +CP Q G K C+ C + GH+SKNC P + + P G C
Sbjct: 61 HIQTECPNQAQ--GAK---CYNCGQFGHISKNCDSAPSSTNNAPSFKRPSGRASGTTCYK 115
Query: 188 CGGVTHLARDC 198
CGG H ARDC
Sbjct: 116 CGGPNHFARDC 126
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 42/139 (30%), Positives = 57/139 (41%)
Query: 72 PGMKPGESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNC---PSKNDETEST 128
P + C+ C HI CP +A+ K C C + GH KNC PS + S
Sbjct: 45 PKQNTAKQCYSCGDVGHIQTECPNQAQGAK---CYNCGQFGHISKNCDSAPSSTNNAPSF 101
Query: 129 K---------LCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIY 179
K CY CG H C Q K C+ C + GH+SK+C +A G
Sbjct: 102 KRPSGRASGTTCYKCGGPNHFARDC----QANTVK---CYACGKVGHISKDCHSSAGGSN 154
Query: 180 PKGGCCKICGGVTHLARDC 198
C CG H++++C
Sbjct: 155 FSAKTCYNCGKSGHISKEC 173
Score = 151 (58.2 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 36/126 (28%), Positives = 57/126 (45%)
Query: 103 KICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICK 162
+ C C GH +C + +E +LCYNC + GH CP P Q+ + C+ C
Sbjct: 7 RTCYKCGEVGHVADDC--QQEE----RLCYNCHKPGHESNDCPDPKQNTAKQ---CYSCG 57
Query: 163 EQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDCPNKGIQGFTASSKQAMAGGERPTG 222
+ GH+ CP A +G C CG H++++C + SS +RP+G
Sbjct: 58 DVGHIQTECPNQA-----QGAKCYNCGQFGHISKNCDS------APSSTNNAPSFKRPSG 106
Query: 223 QVTKFT 228
+ + T
Sbjct: 107 RASGTT 112
Score = 126 (49.4 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 27/76 (35%), Positives = 37/76 (48%)
Query: 70 RVPGMKPGESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETE-ST 128
R G G +C+ C H A+ C +A K C C + GH K+C S + S
Sbjct: 103 RPSGRASGTTCYKCGGPNHFARDC--QANTVK---CYACGKVGHISKDCHSSAGGSNFSA 157
Query: 129 KLCYNCGQAGHSLAQC 144
K CYNCG++GH +C
Sbjct: 158 KTCYNCGKSGHISKEC 173
>UNIPROTKB|Q59YJ9 [details] [associations]
symbol:GIS2 "Putative uncharacterized protein GIS2"
species:237561 "Candida albicans SC5314" [GO:0003676 "nucleic acid
binding" evidence=NAS] [GO:0035690 "cellular response to drug"
evidence=IMP] [GO:0070417 "cellular response to cold" evidence=IMP]
[GO:0071470 "cellular response to osmotic stress" evidence=IMP]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
CGD:CAL0002417 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
GO:GO:0035690 EMBL:AACQ01000100 EMBL:AACQ01000097 GO:GO:0071470
GO:GO:0070417 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 KO:K09250 RefSeq:XP_714599.1
RefSeq:XP_714730.1 ProteinModelPortal:Q59YJ9 STRING:Q59YJ9
GeneID:3643638 GeneID:3643744 KEGG:cal:CaO19.10692
KEGG:cal:CaO19.3182 Uniprot:Q59YJ9
Length = 175
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 44/131 (33%), Positives = 60/131 (45%)
Query: 79 SCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAG 138
+C+ C H+A C ++ ++C C + GH +CP T K CY+CG G
Sbjct: 8 TCYKCGEVGHVADDCQ-----QEERLCYNCHKPGHESNDCPDPKQNT--AKQCYSCGDVG 60
Query: 139 HSLAQCPQPLQDGGTKFASCFICKEQGHLSKNC---PQNAHGI----YPKGGC----CKI 187
H +CP Q G K C+ C + GH+SKNC P + + P G C
Sbjct: 61 HIQTECPNQAQ--GAK---CYNCGQFGHISKNCDSAPSSTNNAPSFKRPSGRASGTTCYK 115
Query: 188 CGGVTHLARDC 198
CGG H ARDC
Sbjct: 116 CGGPNHFARDC 126
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 42/139 (30%), Positives = 57/139 (41%)
Query: 72 PGMKPGESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNC---PSKNDETEST 128
P + C+ C HI CP +A+ K C C + GH KNC PS + S
Sbjct: 45 PKQNTAKQCYSCGDVGHIQTECPNQAQGAK---CYNCGQFGHISKNCDSAPSSTNNAPSF 101
Query: 129 K---------LCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIY 179
K CY CG H C Q K C+ C + GH+SK+C +A G
Sbjct: 102 KRPSGRASGTTCYKCGGPNHFARDC----QANTVK---CYACGKVGHISKDCHSSAGGSN 154
Query: 180 PKGGCCKICGGVTHLARDC 198
C CG H++++C
Sbjct: 155 FSAKTCYNCGKSGHISKEC 173
Score = 151 (58.2 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 36/126 (28%), Positives = 57/126 (45%)
Query: 103 KICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICK 162
+ C C GH +C + +E +LCYNC + GH CP P Q+ + C+ C
Sbjct: 7 RTCYKCGEVGHVADDC--QQEE----RLCYNCHKPGHESNDCPDPKQNTAKQ---CYSCG 57
Query: 163 EQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDCPNKGIQGFTASSKQAMAGGERPTG 222
+ GH+ CP A +G C CG H++++C + SS +RP+G
Sbjct: 58 DVGHIQTECPNQA-----QGAKCYNCGQFGHISKNCDS------APSSTNNAPSFKRPSG 106
Query: 223 QVTKFT 228
+ + T
Sbjct: 107 RASGTT 112
Score = 126 (49.4 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 27/76 (35%), Positives = 37/76 (48%)
Query: 70 RVPGMKPGESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETE-ST 128
R G G +C+ C H A+ C +A K C C + GH K+C S + S
Sbjct: 103 RPSGRASGTTCYKCGGPNHFARDC--QANTVK---CYACGKVGHISKDCHSSAGGSNFSA 157
Query: 129 KLCYNCGQAGHSLAQC 144
K CYNCG++GH +C
Sbjct: 158 KTCYNCGKSGHISKEC 173
>ASPGD|ASPL0000028407 [details] [associations]
symbol:AN5111 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0000747 "conjugation with
cellular fusion" evidence=IEA] [GO:0031137 "regulation of
conjugation with cellular fusion" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 EMBL:BN001305 Gene3D:4.10.60.10
SUPFAM:SSF57756 OMA:FQFMSSS EnsemblFungi:CADANIAT00003095
Uniprot:C8VEX3
Length = 171
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 53/160 (33%), Positives = 68/160 (42%)
Query: 77 GESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQ 136
G CF C H A+ CP K C C +GH + C E K CY CG
Sbjct: 5 GRVCFNCGEATHQARDCPKKG----TPTCYNCGGQGHVSRECTVAPKE----KSCYRCGA 56
Query: 137 AGHSLAQCPQPLQD----GGTKFASCFICKEQGHLSKNCPQN-AHGIYPKGG------CC 185
GH +CPQ ++ GG + C+ C GH+++NC Q ++G GG C
Sbjct: 57 VGHISRECPQAGENERPAGGQE---CYKCGRVGHIARNCSQGGSYGGGFGGGYGGRQQTC 113
Query: 186 KICGGVTHLARDCP------NKGIQGFTASSKQAMAGGER 219
CGG H+ARDC N G G + A GER
Sbjct: 114 YSCGGFGHMARDCTQGQKCYNCGETGHVSRDCPTEAKGER 153
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 41/144 (28%), Positives = 63/144 (43%)
Query: 67 HPLRVPGMKPGESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPS--KNDE 124
H R K +C+ C + H+++ C + K K C C GH + CP +N+
Sbjct: 16 HQARDCPKKGTPTCYNCGGQGHVSRECTVAP---KEKSCYRCGAVGHISRECPQAGENER 72
Query: 125 TESTKLCYNCGQAGHSLAQCPQPLQDGGT-------KFASCFICKEQGHLSKNCPQNAHG 177
+ CY CG+ GH C Q GG + +C+ C GH++++C Q
Sbjct: 73 PAGGQECYKCGRVGHIARNCSQGGSYGGGFGGGYGGRQQTCYSCGGFGHMARDCTQ---- 128
Query: 178 IYPKGGCCKICGGVTHLARDCPNK 201
G C CG H++RDCP +
Sbjct: 129 ----GQKCYNCGETGHVSRDCPTE 148
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 47/146 (32%), Positives = 61/146 (41%)
Query: 67 HPLRVPGMKPGE-SCFICKAKEHIAKHCPMKAEWEK---NKICLVCRRRGHTLKNCPSKN 122
H R + P E SC+ C A HI++ CP E E+ + C C R GH +NC
Sbjct: 37 HVSRECTVAPKEKSCYRCGAVGHISRECPQAGENERPAGGQECYKCGRVGHIARNCSQGG 96
Query: 123 DETES--------TKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQN 174
+ CY+CG GH C Q G K C+ C E GH+S++CP
Sbjct: 97 SYGGGFGGGYGGRQQTCYSCGGFGHMARDCTQ-----GQK---CYNCGETGHVSRDCPTE 148
Query: 175 AHGIYPKGGCCKICGGVTHLARDCPN 200
A G C C H+ CPN
Sbjct: 149 AKG----ERVCYQCKQPGHIQSACPN 170
Score = 142 (55.0 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 32/107 (29%), Positives = 48/107 (44%)
Query: 77 GESCFICKAKEHIAKHCPMKAEWE---------KNKICLVCRRRGHTLKNCPSKNDETES 127
G+ C+ C HIA++C + + + C C GH ++C T+
Sbjct: 76 GQECYKCGRVGHIARNCSQGGSYGGGFGGGYGGRQQTCYSCGGFGHMARDC------TQG 129
Query: 128 TKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQN 174
K CYNCG+ GH CP + G + C+ CK+ GH+ CP N
Sbjct: 130 QK-CYNCGETGHVSRDCPTEAK--GERV--CYQCKQPGHIQSACPNN 171
>POMBASE|SPAC13D6.02c [details] [associations]
symbol:byr3 "zinc finger protein Byr3" species:4896
"Schizosaccharomyces pombe" [GO:0000747 "conjugation with cellular
fusion" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IGI] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 PomBase:SPAC13D6.02c GO:GO:0005829 EMBL:CU329670
GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0000747 EMBL:S45038 PIR:T37622 RefSeq:NP_593680.1
ProteinModelPortal:P36627 STRING:P36627 PRIDE:P36627
EnsemblFungi:SPAC13D6.02c.1 GeneID:2542829 KEGG:spo:SPAC13D6.02c
HOGENOM:HOG000186262 KO:K09250 OMA:FQFMSSS OrthoDB:EOG4K0TXR
NextBio:20803871 GO:GO:0031137 Uniprot:P36627
Length = 179
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 42/139 (30%), Positives = 59/139 (42%)
Query: 75 KPGESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNC 134
+PG C+ C H A+ C K IC C + GH C E + K CY C
Sbjct: 14 RPGPRCYNCGENGHQARECT------KGSICYNCNQTGHKASECT----EPQQEKTCYAC 63
Query: 135 GQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAH------GIYPKGGCCKIC 188
G AGH + CP + A C+ C GH++++C N G + C C
Sbjct: 64 GTAGHLVRDCPS--SPNPRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYAC 121
Query: 189 GGVTHLARDCPNKGIQGFT 207
G H ARDC G++ ++
Sbjct: 122 GSYGHQARDC-TMGVKCYS 139
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 36/128 (28%), Positives = 55/128 (42%)
Query: 77 GESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQ 136
G C+ C H A C E ++ K C C GH +++CPS + + + CY CG+
Sbjct: 35 GSICYNCNQTGHKASEC---TEPQQEKTCYACGTAGHLVRDCPSSPNPRQGAE-CYKCGR 90
Query: 137 AGHSLAQCPQPLQDGGTKFA------SCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGG 190
GH C Q G +F +C+ C GH +++C G C CG
Sbjct: 91 VGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDCTM--------GVKCYSCGK 142
Query: 191 VTHLARDC 198
+ H + +C
Sbjct: 143 IGHRSFEC 150
Score = 138 (53.6 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 36/134 (26%), Positives = 54/134 (40%)
Query: 78 ESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDET-------ESTKL 130
++C+ C H+ + CP + C C R GH ++C + ++ S
Sbjct: 58 KTCYACGTAGHLVRDCPSSPNPRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMN 117
Query: 131 CYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGG 190
CY CG GH C G K C+ C + GH S C Q + G C K C
Sbjct: 118 CYACGSYGHQARDCTM-----GVK---CYSCGKIGHRSFECQQASDGQL----CYK-CNQ 164
Query: 191 VTHLARDCPNKGIQ 204
H+A +C + I+
Sbjct: 165 PGHIAVNCTSPVIE 178
Score = 129 (50.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 32/108 (29%), Positives = 45/108 (41%)
Query: 72 PGMKPGESCFICKAKEHIAKHCPMKAEWE--------KNKICLVCRRRGHTLKNCPSKND 123
P + G C+ C HIA+ C + N C C GH ++C
Sbjct: 77 PNPRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDC----- 131
Query: 124 ETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNC 171
T K CY+CG+ GH +C Q DG C+ C + GH++ NC
Sbjct: 132 -TMGVK-CYSCGKIGHRSFECQQA-SDGQL----CYKCNQPGHIAVNC 172
>TAIR|locus:2135139 [details] [associations]
symbol:CSDP1 "cold shock domain protein 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009409 "response
to cold" evidence=IGI;IEP] [GO:0003690 "double-stranded DNA
binding" evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0009414
"response to water deprivation" evidence=IEP] [GO:0009651 "response
to salt stress" evidence=IEP] [GO:0010501 "RNA secondary structure
unwinding" evidence=IDA] [GO:0032508 "DNA duplex unwinding"
evidence=IDA] [GO:0009631 "cold acclimation" evidence=IGI]
[GO:0009165 "nucleotide biosynthetic process" evidence=RCA]
InterPro:IPR001878 InterPro:IPR002059 InterPro:IPR011129
Pfam:PF00098 Pfam:PF00313 PRINTS:PR00050 PROSITE:PS50158
SMART:SM00343 SMART:SM00357 Prosite:PS00352 GO:GO:0005634
GO:GO:0005737 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
GO:GO:0046872 GO:GO:0009651 GO:GO:0009414 GO:GO:0008270
GO:GO:0009631 GO:GO:0003723 EMBL:AL161588 GO:GO:0003690
GO:GO:0003697 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:AL022373
HOGENOM:HOG000186262 KO:K09250 InterPro:IPR019844 GO:GO:0010501
EMBL:AK226815 IPI:IPI00525206 PIR:T05494 RefSeq:NP_195326.1
UniGene:At.23073 HSSP:P15277 ProteinModelPortal:O65639 SMR:O65639
STRING:O65639 PaxDb:O65639 PRIDE:O65639 EnsemblPlants:AT4G36020.1
GeneID:829758 KEGG:ath:AT4G36020 TAIR:At4g36020 eggNOG:COG1278
InParanoid:O65639 OMA:GRACYNC PhylomeDB:O65639
ProtClustDB:CLSN2685328 Genevestigator:O65639 GO:GO:0032508
Uniprot:O65639
Length = 299
Score = 182 (69.1 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 45/149 (30%), Positives = 64/149 (42%)
Query: 77 GESCFICKAKEHIAKHCPMKAEWEK-------NKICLVCRRRGHTLKNCPSKN----DET 125
GE C+ C H A+ C ++ N C C GH ++C K+ D+
Sbjct: 131 GEGCYNCGDTGHFARDCTSAGNGDQRGATKGGNDGCYTCGDVGHVARDCTQKSVGNGDQR 190
Query: 126 ESTKL----CYNCGQAGHSLAQCPQPL-----QDGGTKFASCFICKEQGHLSKNCPQNAH 176
+ K CY CG GH C Q + + GG +C+ C GH++++C
Sbjct: 191 GAVKGGNDGCYTCGDVGHFARDCTQKVAAGNVRSGGGGSGTCYSCGGVGHIARDCATKRQ 250
Query: 177 GIYPKGGCCKICGGVTHLARDCPNKGIQG 205
P GC + CGG HLARDC +G G
Sbjct: 251 ---PSRGCYQ-CGGSGHLARDCDQRGSGG 275
Score = 142 (55.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 37/136 (27%), Positives = 52/136 (38%)
Query: 78 ESCFICKAKEHIAKHCPMKAEWEK---------NKICLVCRRRGHTLKNCPSK----NDE 124
+ C+ C H+A+ C K+ N C C GH ++C K N
Sbjct: 164 DGCYTCGDVGHVARDCTQKSVGNGDQRGAVKGGNDGCYTCGDVGHFARDCTQKVAAGNVR 223
Query: 125 TES--TKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKG 182
+ + CY+CG GH C Q C+ C GHL+++C Q G
Sbjct: 224 SGGGGSGTCYSCGGVGHIARDCATKRQPS----RGCYQCGGSGHLARDCDQRGSGGGGND 279
Query: 183 GCCKICGGVTHLARDC 198
C CG H AR+C
Sbjct: 280 NACYKCGKEGHFAREC 295
Score = 135 (52.6 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 34/97 (35%), Positives = 46/97 (47%)
Query: 131 CYNCGQAGHSLAQCPQPLQDGGTKFAS-----CFICKEQGHLSKNCPQNAHGIY---PKG 182
CYNCG+ GH C GG + S C+ C + GH +++C +G KG
Sbjct: 102 CYNCGELGHISKDCGIGGGGGGGERRSRGGEGCYNCGDTGHFARDCTSAGNGDQRGATKG 161
Query: 183 GC--CKICGGVTHLARDCPNKGIQGFTASSKQAMAGG 217
G C CG V H+ARDC K + G + A+ GG
Sbjct: 162 GNDGCYTCGDVGHVARDCTQKSV-G-NGDQRGAVKGG 196
Score = 133 (51.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 29/106 (27%), Positives = 45/106 (42%)
Query: 74 MKPG-ESCFICKAKEHIAKHCPMKAEWEKNK-------ICLVCRRRGHTLKNCPSKNDET 125
+K G + C+ C H A+ C K + C C GH ++C +K +
Sbjct: 193 VKGGNDGCYTCGDVGHFARDCTQKVAAGNVRSGGGGSGTCYSCGGVGHIARDCATKRQPS 252
Query: 126 ESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNC 171
CY CG +GH C Q GG +C+ C ++GH ++ C
Sbjct: 253 RG---CYQCGGSGHLARDCDQRGSGGGGNDNACYKCGKEGHFAREC 295
>DICTYBASE|DDB_G0293328 [details] [associations]
symbol:DDB_G0293328 "Cellular nucleic acid-binding
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 dictyBase:DDB_G0293328
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 eggNOG:COG5082
Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:AAFI02000201
RefSeq:XP_629203.1 ProteinModelPortal:Q54BY8 STRING:Q54BY8
EnsemblProtists:DDB0191881 GeneID:8629162 KEGG:ddi:DDB_G0293328
InParanoid:Q54BY8 OMA:CKEVGHI ProtClustDB:PTZ00368 Uniprot:Q54BY8
Length = 131
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 35/101 (34%), Positives = 51/101 (50%)
Query: 79 SCFICKAKEHIAKHCPMKAE--WEK-NKI-CLVCRRRGHTLKNCPSKNDETESTKLCYNC 134
+C++C H+++ CP + +EK + I C C GH ++C D CYNC
Sbjct: 32 ACYVCNVVGHLSRECPQNPQPTFEKKDPIKCYQCNGFGHFARDCRRGRDNK-----CYNC 86
Query: 135 GQAGHSLAQCPQPLQDG-GTKFASCFICKEQGHLSKNCPQN 174
G GH CP P G G A C+ C + GH++K CP+N
Sbjct: 87 GGLGHISKDCPSPSTRGQGRDAAKCYKCNQPGHIAKACPEN 127
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 40/126 (31%), Positives = 56/126 (44%)
Query: 78 ESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTK---LCYNC 134
+SC+ CK HI+++CP E ++ C VC GH + CP T K CY C
Sbjct: 7 KSCYKCKEVGHISRNCPKNPE-AGDRACYVCNVVGHLSRECPQNPQPTFEKKDPIKCYQC 65
Query: 135 GQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQ-NAHGIYPKGGCCKICGGVTH 193
GH C + +D C+ C GH+SK+CP + G C C H
Sbjct: 66 NGFGHFARDCRRG-RDN-----KCYNCGGLGHISKDCPSPSTRGQGRDAAKCYKCNQPGH 119
Query: 194 LARDCP 199
+A+ CP
Sbjct: 120 IAKACP 125
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 36/107 (33%), Positives = 52/107 (48%)
Query: 101 KNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKF--ASC 158
K K C C+ GH +NCP KN E + CY C GH +CPQ Q K C
Sbjct: 5 KEKSCYKCKEVGHISRNCP-KNPEA-GDRACYVCNVVGHLSRECPQNPQPTFEKKDPIKC 62
Query: 159 FICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDCPNKGIQG 205
+ C GH +++C + + C CGG+ H+++DCP+ +G
Sbjct: 63 YQCNGFGHFARDCRRG------RDNKCYNCGGLGHISKDCPSPSTRG 103
>TAIR|locus:2079859 [details] [associations]
symbol:AT3G43590 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 eggNOG:COG5082 Gene3D:4.10.60.10
SUPFAM:SSF57756 EMBL:AL391734 EMBL:AY099824 EMBL:BT002203
IPI:IPI00517919 RefSeq:NP_189945.1 UniGene:At.36254
ProteinModelPortal:Q9FYD1 SMR:Q9FYD1 IntAct:Q9FYD1 PRIDE:Q9FYD1
EnsemblPlants:AT3G43590.1 GeneID:823456 KEGG:ath:AT3G43590
TAIR:At3g43590 HOGENOM:HOG000071063 InParanoid:Q9FYD1 OMA:RECPNSS
PhylomeDB:Q9FYD1 ProtClustDB:CLSN2684404 ArrayExpress:Q9FYD1
Genevestigator:Q9FYD1 Uniprot:Q9FYD1
Length = 551
Score = 182 (69.1 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 39/124 (31%), Positives = 53/124 (42%)
Query: 75 KPGESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNC 134
K + CFIC + EH AK C K C +C++ GH K+CP K +C C
Sbjct: 186 KRRKPCFICGSLEHGAKQC------SKGHDCYICKKTGHRAKDCPDKYKNGSKGAVCLRC 239
Query: 135 GQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHL 194
G GH + C K C+ICK GHL C + + + C + CG + H
Sbjct: 240 GDFGHDMILCKYEYSKEDLKDVQCYICKSFGHLC--CVEPGNSLSWAVSCYR-CGQLGHS 296
Query: 195 ARDC 198
C
Sbjct: 297 GLAC 300
Score = 147 (56.8 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 36/101 (35%), Positives = 46/101 (45%)
Query: 94 PMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGT 153
P A W C C +GHT NCP+ T+ K C+ CG H QC +
Sbjct: 160 PPDAGWVS---CYSCGEQGHTSFNCPTP---TKRRKPCFICGSLEHGAKQC--------S 205
Query: 154 KFASCFICKEQGHLSKNCPQN-AHGIYPKGGCCKICGGVTH 193
K C+ICK+ GH +K+CP +G KG C CG H
Sbjct: 206 KGHDCYICKKTGHRAKDCPDKYKNG--SKGAVCLRCGDFGH 244
Score = 142 (55.0 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 42/141 (29%), Positives = 57/141 (40%)
Query: 77 GESCFICKAKEHIAKHCPMKAE-WEKNKICLVCRRRGHTLKNCPSKNDETESTKL-CYNC 134
G C+ICK H AK CP K + K +CL C GH + C + + + + CY C
Sbjct: 207 GHDCYICKKTGHRAKDCPDKYKNGSKGAVCLRCGDFGHDMILCKYEYSKEDLKDVQCYIC 266
Query: 135 GQAGHSLAQCPQPLQDGGTKFA-SCFICKEQGHLSKNC--------------PQNAHGIY 179
GH C +P +A SC+ C + GH C P+
Sbjct: 267 KSFGHLC--CVEP--GNSLSWAVSCYRCGQLGHSGLACGRHYEESNENDSATPERLFNSR 322
Query: 180 PKGGCCKICGGVTHLARDCPN 200
C + CG H AR+CPN
Sbjct: 323 EASECYR-CGEEGHFARECPN 342
Score = 133 (51.9 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 36/124 (29%), Positives = 49/124 (39%)
Query: 79 SCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAG 138
SC+ C + H + +CP + + K C +C H K C +D CY C + G
Sbjct: 167 SCYSCGEQGHTSFNCPTPTK--RRKPCFICGSLEHGAKQCSKGHD-------CYICKKTG 217
Query: 139 HSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
H CP ++G +K A C C + GH C K C IC HL C
Sbjct: 218 HRAKDCPDKYKNG-SKGAVCLRCGDFGHDMILCKYEYSKEDLKDVQCYICKSFGHLC--C 274
Query: 199 PNKG 202
G
Sbjct: 275 VEPG 278
>UNIPROTKB|G4N4A8 [details] [associations]
symbol:MGG_05948 "Zinc knuckle domain-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 EMBL:CM001233 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756 KO:K09250
RefSeq:XP_003711783.1 ProteinModelPortal:G4N4A8
EnsemblFungi:MGG_05948T0 GeneID:2684027 KEGG:mgr:MGG_05948
Uniprot:G4N4A8
Length = 199
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 36/114 (31%), Positives = 52/114 (45%)
Query: 77 GESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQ 136
G +C+ C H A+ CP + + C C GH + CP +E + K+CY C Q
Sbjct: 13 GRTCYTCGQPNHQARDCPNRGAAK----CYNCGGEGHISRACP---EEPKDQKICYRCSQ 65
Query: 137 AGHSLAQCPQPLQDGG-------TKFASCFICKEQGHLSKNCPQNAHGIYPKGG 183
GH CP GG + A C+ C E GH+++NC + +G GG
Sbjct: 66 PGHISRDCPSGGAGGGGGGGGGQSSGAECYKCGEVGHIARNCSKGGYGGGGGGG 119
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 39/122 (31%), Positives = 55/122 (45%)
Query: 103 KICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICK 162
+ C C + H ++CP++ + K CYNCG GH CP+ +D K C+ C
Sbjct: 14 RTCYTCGQPNHQARDCPNRG----AAK-CYNCGGEGHISRACPEEPKD--QKI--CYRCS 64
Query: 163 EQGHLSKNCPQNAHGIYPKGGC-------CKICGGVTHLARDCPNKGIQGFTASSKQAMA 215
+ GH+S++CP G GG C CG V H+AR+C G G
Sbjct: 65 QPGHISRDCPSGGAGGGGGGGGGQSSGAECYKCGEVGHIARNCSKGGYGGGGGGGYSGGG 124
Query: 216 GG 217
GG
Sbjct: 125 GG 126
Score = 131 (51.2 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 30/91 (32%), Positives = 40/91 (43%)
Query: 129 KLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGG-CCKI 187
+ CY CGQ H CP G K C+ C +GH+S+ CP+ PK C
Sbjct: 14 RTCYTCGQPNHQARDCPNR---GAAK---CYNCGGEGHISRACPEE-----PKDQKICYR 62
Query: 188 CGGVTHLARDCPNKGIQGFTASSKQAMAGGE 218
C H++RDCP+ G G +G E
Sbjct: 63 CSQPGHISRDCPSGGAGGGGGGGGGQSSGAE 93
Score = 111 (44.1 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 24/72 (33%), Positives = 33/72 (45%)
Query: 103 KICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICK 162
K C C GH ++C +K CYNCG+ GH C + G K C+ C+
Sbjct: 138 KTCYSCGGVGHMSRDC------VNGSK-CYNCGETGHFSRDCSKR-STTGEKM--CYKCQ 187
Query: 163 EQGHLSKNCPQN 174
+ GH+ CP N
Sbjct: 188 QPGHVQAECPNN 199
Score = 111 (44.1 bits), Expect = 0.00017, P = 0.00017
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 77 GESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQ 136
G++C+ C H+++ C ++ C C GH ++C ++ T K+CY C Q
Sbjct: 137 GKTCYSCGGVGHMSRDCVNGSK------CYNCGETGHFSRDCSKRS--TTGEKMCYKCQQ 188
Query: 137 AGHSLAQCP 145
GH A+CP
Sbjct: 189 PGHVQAECP 197
Score = 99 (39.9 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 24/72 (33%), Positives = 34/72 (47%)
Query: 129 KLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKIC 188
K CY+CG GH C G+K C+ C E GH S++C + + + C K C
Sbjct: 138 KTCYSCGGVGHMSRDCVN-----GSK---CYNCGETGHFSRDCSKRS--TTGEKMCYK-C 186
Query: 189 GGVTHLARDCPN 200
H+ +CPN
Sbjct: 187 QQPGHVQAECPN 198
Score = 49 (22.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 73 GMKPGESCFICKAKEHIAKHC 93
G G C+ C HIA++C
Sbjct: 87 GQSSGAECYKCGEVGHIARNC 107
>WB|WBGene00019537 [details] [associations]
symbol:K08D12.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0046872 GO:GO:0008270 GO:GO:0040011
GO:GO:0000003 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 KO:K09250 OMA:FQFMSSS
GeneTree:ENSGT00510000047065 EMBL:FO081610 GeneID:176979
KEGG:cel:CELE_K08D12.3 UCSC:K08D12.3a.1 CTD:176979 NextBio:894830
RefSeq:NP_741323.1 ProteinModelPortal:Q966I7 SMR:Q966I7
STRING:Q966I7 PRIDE:Q966I7 EnsemblMetazoa:K08D12.3a.1
EnsemblMetazoa:K08D12.3a.2 WormBase:K08D12.3a InParanoid:Q966I7
ArrayExpress:Q966I7 Uniprot:Q966I7
Length = 151
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 37/101 (36%), Positives = 50/101 (49%)
Query: 127 STKLCYNCGQAGHSLAQCPQPLQDGGTKF----ASCFICKEQGHLSKNCPQNAHGIYPKG 182
S + CY C Q GH CP DGG + ++C+ C+E GH S++CP+ G +G
Sbjct: 2 SDRNCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRG 61
Query: 183 G-----CCKICGGVTHLARDCPNKGIQGFTASSKQAMAGGE 218
G C CGG H +RDCP+ +G S GGE
Sbjct: 62 GGGGGGSCYNCGGRGHYSRDCPSARSEG--GSGGYGGRGGE 100
Score = 130 (50.8 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 37/118 (31%), Positives = 54/118 (45%)
Query: 105 CLVCRRRGHTLKNCPSKNDETESTK-------LCYNCGQAGHSLAQCPQPLQDGGTKFA- 156
C C++ GH +NCP N E++ + CYNC + GH CP+ GG +
Sbjct: 6 CYKCQQPGHISRNCP--NGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRGGG 63
Query: 157 ----SCFICKEQGHLSKNCP----QNAHGIYP-KGGCCKICGGVTHLARDCPNKGIQG 205
SC+ C +GH S++CP + G Y +GG + GG + C N G G
Sbjct: 64 GGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGG-----QKCYNCGRSG 116
Score = 126 (49.4 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 27/86 (31%), Positives = 41/86 (47%)
Query: 105 CLVCRRRGHTLKNCPSKNDETEST--------------KLCYNCGQAGHSLAQCPQPLQD 150
C C RGH ++CPS E S + CYNCG++GH +C +
Sbjct: 69 CYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHISRECTE---S 125
Query: 151 GGTKFASCFICKEQGHLSKNCPQNAH 176
G + C+ C+E GH+S++CP +
Sbjct: 126 GSAEEKRCYQCQETGHISRDCPSQTN 151
Score = 122 (48.0 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 35/132 (26%), Positives = 55/132 (41%)
Query: 77 GESCFICKAKEHIAKHCPMKAEWEKNK-------ICLVCRRRGHTLKNCPSKNDETESTK 129
G +C+ C+ H ++ CP + C C RGH ++CPS E S
Sbjct: 34 GSTCYNCQETGHFSRDCPKGGSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSARSEGGSGG 93
Query: 130 LCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICG 189
Y G+ G + GG K C+ C GH+S+ C ++ + C C
Sbjct: 94 --YG-GRGGEGRSF-------GGQK---CYNCGRSGHISRECTESGSAEEKR---CYQCQ 137
Query: 190 GVTHLARDCPNK 201
H++RDCP++
Sbjct: 138 ETGHISRDCPSQ 149
Score = 112 (44.5 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 33/136 (24%), Positives = 55/136 (40%)
Query: 79 SCFICKAKEHIAKHCPM-KAEWEKN-----KICLVCRRRGHTLKNCPS------KNDETE 126
+C+ C+ HI+++CP +++ + C C+ GH ++CP +
Sbjct: 5 NCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRGGGG 64
Query: 127 STKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCK 186
CYNCG GH CP +GG+ G+ + + G G C
Sbjct: 65 GGGSCYNCGGRGHYSRDCPSARSEGGSG----------GYGGRGGEGRSFG----GQKCY 110
Query: 187 ICGGVTHLARDCPNKG 202
CG H++R+C G
Sbjct: 111 NCGRSGHISRECTESG 126
>UNIPROTKB|O42395 [details] [associations]
symbol:CNBP "Cellular nucleic acid-binding protein"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0005783
GO:GO:0005829 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008284 GO:GO:0008270 GO:GO:0045944 GO:GO:0006351
eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 KO:K09250 CTD:7555 HOVERGEN:HBG000397
OrthoDB:EOG45HRZN EMBL:AF004942 IPI:IPI00582111 RefSeq:NP_990238.1
UniGene:Gga.3333 ProteinModelPortal:O42395 STRING:O42395
GeneID:395731 KEGG:gga:395731 InParanoid:O42395 NextBio:20815799
ArrayExpress:O42395 Uniprot:O42395
Length = 172
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 42/132 (31%), Positives = 61/132 (46%)
Query: 80 CFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGH 139
C+ C H+AK C + +++K C C R GH K+C K + E + CYNCG+ GH
Sbjct: 48 CYRCGESGHLAKDCDL----QEDKACYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGH 101
Query: 140 SLAQCPQP-------------LQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCK 186
C +Q TK C+ C E GH++ NC + + + C +
Sbjct: 102 LARDCDHADEQKCYSCGEFGHIQKDCTK-VKCYRCGETGHVAINCSKTS-----EVNCYR 155
Query: 187 ICGGVTHLARDC 198
CG HLAR+C
Sbjct: 156 -CGESGHLAREC 166
Score = 151 (58.2 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 32/95 (33%), Positives = 46/95 (48%)
Query: 104 ICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKE 163
IC C GH K+C + D K CYNCG+ GH C +P ++ + C+ C +
Sbjct: 47 ICYRCGESGHLAKDCDLQED-----KACYNCGRGGHIAKDCKEPKRE---REQCCYNCGK 98
Query: 164 QGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
GHL+++C H K C CG H+ +DC
Sbjct: 99 PGHLARDCD---HADEQK---CYSCGEFGHIQKDC 127
Score = 139 (54.0 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 31/102 (30%), Positives = 51/102 (50%)
Query: 74 MKPGESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYN 133
++ ++C+ C HIAK C + + E+ + C C + GH ++C D + K CY+
Sbjct: 63 LQEDKACYNCGRGGHIAKDCK-EPKREREQCCYNCGKPGHLARDC----DHADEQK-CYS 116
Query: 134 CGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNA 175
CG+ GH C TK C+ C E GH++ NC + +
Sbjct: 117 CGEFGHIQKDC--------TK-VKCYRCGETGHVAINCSKTS 149
Score = 127 (49.8 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 34/110 (30%), Positives = 48/110 (43%)
Query: 105 CLVCRRRGHTLKNCPS-------------KNDETESTKL---CYNCGQAGHSLAQCPQPL 148
C C R GH + CP+ + S+ L CY CG++GH C L
Sbjct: 6 CFKCGRTGHWARECPTGIGRGRGMRSRGRAGFQFMSSSLPDICYRCGESGHLAKDCD--L 63
Query: 149 QDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
Q+ +C+ C GH++K+C + + CC CG HLARDC
Sbjct: 64 QED----KACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC 106
>UNIPROTKB|E2RPD7 [details] [associations]
symbol:CNBP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 GO:GO:0005783 GO:GO:0005829
GO:GO:0005634 GO:GO:0046872 GO:GO:0008284 GO:GO:0008270
GO:GO:0045944 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
GeneTree:ENSGT00510000047065 OMA:CPNGQGG EMBL:AAEX03012021
UniGene:Cfa.4499 ProteinModelPortal:E2RPD7 PRIDE:E2RPD7
Ensembl:ENSCAFT00000006937 NextBio:20852160 Uniprot:E2RPD7
Length = 179
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 42/132 (31%), Positives = 60/132 (45%)
Query: 80 CFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGH 139
C+ C H+AK C ++ + E C C R GH K+C K + E + CYNCG+ GH
Sbjct: 54 CYRCGESGHLAKDCDLQEDVEA---CYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGH 108
Query: 140 SLAQCPQP-------------LQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCK 186
C +Q TK C+ C E GH++ NC + + + C +
Sbjct: 109 LARDCDHADEQKCYSCGEFGHIQKDCTK-VKCYRCGETGHVAINCSKTS-----EVNCYR 162
Query: 187 ICGGVTHLARDC 198
CG HLAR+C
Sbjct: 163 -CGESGHLAREC 173
Score = 152 (58.6 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 32/95 (33%), Positives = 46/95 (48%)
Query: 104 ICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKE 163
IC C GH K+C D E + CYNCG+ GH C +P ++ + C+ C +
Sbjct: 53 ICYRCGESGHLAKDC----DLQEDVEACYNCGRGGHIAKDCKEPKRE---REQCCYNCGK 105
Query: 164 QGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
GHL+++C H K C CG H+ +DC
Sbjct: 106 PGHLARDCD---HADEQK---CYSCGEFGHIQKDC 134
Score = 140 (54.3 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 35/119 (29%), Positives = 52/119 (43%)
Query: 80 CFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGH 139
CF C H A+ CP + + R RG + + + +CY CG++GH
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRG---MRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGH 62
Query: 140 SLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
C LQ+ +C+ C GH++K+C + + CC CG HLARDC
Sbjct: 63 LAKDCD--LQED---VEACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC 113
Score = 137 (53.3 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 31/107 (28%), Positives = 51/107 (47%)
Query: 78 ESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDET------------ 125
E+C+ C HIAK C + + E+ + C C + GH ++C +++
Sbjct: 74 EACYNCGRGGHIAKDCK-EPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQK 132
Query: 126 ESTKL-CYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNC 171
+ TK+ CY CG+ GH C + T +C+ C E GHL++ C
Sbjct: 133 DCTKVKCYRCGETGHVAINCSK------TSEVNCYRCGESGHLAREC 173
>UNIPROTKB|F8WFK2 [details] [associations]
symbol:Cnbp "Cellular nucleic acid-binding protein"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
RGD:621807 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:4.10.60.10 SUPFAM:SSF57756 GeneTree:ENSGT00510000047065
IPI:IPI00201505 ProteinModelPortal:F8WFK2 SMR:F8WFK2
Ensembl:ENSRNOT00000013884 Uniprot:F8WFK2
Length = 179
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 42/132 (31%), Positives = 60/132 (45%)
Query: 80 CFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGH 139
C+ C H+AK C ++ + E C C R GH K+C K + E + CYNCG+ GH
Sbjct: 54 CYRCGESGHLAKDCDLQEDVEA---CYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGH 108
Query: 140 SLAQCPQP-------------LQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCK 186
C +Q TK C+ C E GH++ NC + + + C +
Sbjct: 109 LARDCDHADEQKCYSCGEFGHIQKDCTK-VKCYRCGETGHVAINCSKTS-----EVNCYR 162
Query: 187 ICGGVTHLARDC 198
CG HLAR+C
Sbjct: 163 -CGESGHLAREC 173
Score = 152 (58.6 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 32/95 (33%), Positives = 46/95 (48%)
Query: 104 ICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKE 163
IC C GH K+C D E + CYNCG+ GH C +P ++ + C+ C +
Sbjct: 53 ICYRCGESGHLAKDC----DLQEDVEACYNCGRGGHIAKDCKEPKRE---REQCCYNCGK 105
Query: 164 QGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
GHL+++C H K C CG H+ +DC
Sbjct: 106 PGHLARDCD---HADEQK---CYSCGEFGHIQKDC 134
Score = 140 (54.3 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 35/119 (29%), Positives = 52/119 (43%)
Query: 80 CFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGH 139
CF C H A+ CP + + R RG + + + +CY CG++GH
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRG---MRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGH 62
Query: 140 SLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
C LQ+ +C+ C GH++K+C + + CC CG HLARDC
Sbjct: 63 LAKDCD--LQED---VEACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC 113
Score = 137 (53.3 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 31/107 (28%), Positives = 51/107 (47%)
Query: 78 ESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDET------------ 125
E+C+ C HIAK C + + E+ + C C + GH ++C +++
Sbjct: 74 EACYNCGRGGHIAKDCK-EPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQK 132
Query: 126 ESTKL-CYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNC 171
+ TK+ CY CG+ GH C + T +C+ C E GHL++ C
Sbjct: 133 DCTKVKCYRCGETGHVAINCSK------TSEVNCYRCGESGHLAREC 173
>MGI|MGI:88431 [details] [associations]
symbol:Cnbp "cellular nucleic acid binding protein"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=ISO] [GO:0003727
"single-stranded RNA binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
MGI:MGI:88431 GO:GO:0005783 GO:GO:0005829 GO:GO:0005634
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0003727
GO:GO:0045944 GO:GO:0006351 GO:GO:0003697 eggNOG:COG5082
Gene3D:4.10.60.10 SUPFAM:SSF57756 HOGENOM:HOG000186262 KO:K09250
CTD:7555 HOVERGEN:HBG000397 ChiTaRS:CNBP EMBL:L12693 EMBL:Z11870
EMBL:X63866 EMBL:Z11871 EMBL:U20326 EMBL:AY176064 EMBL:AK075760
EMBL:AK078427 EMBL:BC058723 IPI:IPI00137229 IPI:IPI00330767
IPI:IPI00454151 PIR:I48297 PIR:I48298 PIR:I49259
RefSeq:NP_001103215.1 RefSeq:NP_038521.1 UniGene:Mm.290251
ProteinModelPortal:P53996 SMR:P53996 IntAct:P53996 STRING:P53996
PhosphoSite:P53996 PaxDb:P53996 PRIDE:P53996
Ensembl:ENSMUST00000032138 Ensembl:ENSMUST00000113619 GeneID:12785
KEGG:mmu:12785 InParanoid:P53996 OMA:CPNGQGG NextBio:282182
Bgee:P53996 CleanEx:MM_CNBP Genevestigator:P53996
GermOnline:ENSMUSG00000030057 Uniprot:P53996
Length = 178
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 41/132 (31%), Positives = 61/132 (46%)
Query: 80 CFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGH 139
C+ C H+AK C + ++++ C C R GH K+C K + E + CYNCG+ GH
Sbjct: 54 CYRCGESGHLAKDCDL----QEDEACYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGH 107
Query: 140 SLAQCPQP-------------LQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCK 186
C +Q TK C+ C E GH++ NC + + + C +
Sbjct: 108 LARDCDHADEQKCYSCGEFGHIQKDCTK-VKCYRCGETGHVAINCSKTS-----EVNCYR 161
Query: 187 ICGGVTHLARDC 198
CG HLAR+C
Sbjct: 162 -CGESGHLAREC 172
Score = 152 (58.6 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 32/95 (33%), Positives = 46/95 (48%)
Query: 104 ICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKE 163
IC C GH K+C + DE CYNCG+ GH C +P ++ + C+ C +
Sbjct: 53 ICYRCGESGHLAKDCDLQEDEA-----CYNCGRGGHIAKDCKEPKRE---REQCCYNCGK 104
Query: 164 QGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
GHL+++C H K C CG H+ +DC
Sbjct: 105 PGHLARDCD---HADEQK---CYSCGEFGHIQKDC 133
Score = 143 (55.4 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 32/102 (31%), Positives = 51/102 (50%)
Query: 74 MKPGESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYN 133
++ E+C+ C HIAK C + + E+ + C C + GH ++C D + K CY+
Sbjct: 69 LQEDEACYNCGRGGHIAKDCK-EPKREREQCCYNCGKPGHLARDC----DHADEQK-CYS 122
Query: 134 CGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNA 175
CG+ GH C TK C+ C E GH++ NC + +
Sbjct: 123 CGEFGHIQKDC--------TK-VKCYRCGETGHVAINCSKTS 155
Score = 139 (54.0 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 35/119 (29%), Positives = 52/119 (43%)
Query: 80 CFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGH 139
CF C H A+ CP + + R RG + + + +CY CG++GH
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRG---MRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGH 62
Query: 140 SLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
C LQ+ +C+ C GH++K+C + + CC CG HLARDC
Sbjct: 63 LAKDCD--LQED----EACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC 112
>UNIPROTKB|B4DP17 [details] [associations]
symbol:CNBP "cDNA FLJ61146, highly similar to Cellular
nucleic acid-binding protein" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 HOVERGEN:HBG000397 EMBL:AC108673 EMBL:AC135587
UniGene:Hs.518249 HGNC:HGNC:13164 ChiTaRS:CNBP EMBL:AK298154
IPI:IPI00977873 SMR:B4DP17 STRING:B4DP17 Ensembl:ENST00000500450
UCSC:uc011bku.2 Uniprot:B4DP17
Length = 160
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 38/125 (30%), Positives = 57/125 (45%)
Query: 80 CFICKAKEHIAKHCPM---KAEWEKNK---ICLVCRRRGHTLKNCPSKNDETESTKLCYN 133
CF C H A+ CP + +++ IC C GH K+C + D CYN
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRDICYRCGESGHLAKDCDLQEDA------CYN 59
Query: 134 CGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTH 193
CG+ GH C +P ++ + C+ C + GHL+++C H K C CG H
Sbjct: 60 CGRGGHIAKDCKEPKRE---REQCCYNCGKPGHLARDCD---HADEQK---CYSCGEFGH 110
Query: 194 LARDC 198
+ +DC
Sbjct: 111 IQKDC 115
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 39/121 (32%), Positives = 60/121 (49%)
Query: 78 ESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQA 137
++C+ C HIAK C + + E+ + C C + GH ++C D + K CY+CG+
Sbjct: 55 DACYNCGRGGHIAKDCK-EPKREREQCCYNCGKPGHLARDC----DHADEQK-CYSCGEF 108
Query: 138 GHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARD 197
GH C TK C+ C E GH++ NC + + + C + CG HLAR+
Sbjct: 109 GHIQKDC--------TK-VKCYRCGETGHVAINCSKTS-----EVNCYR-CGESGHLARE 153
Query: 198 C 198
C
Sbjct: 154 C 154
Score = 107 (42.7 bits), Expect = 0.00014, P = 0.00014
Identities = 25/76 (32%), Positives = 36/76 (47%)
Query: 127 STKLCYNCGQAGHSLAQCPQPLQDG-GTKFAS---CFICKEQGHLSKNCPQNAHGIYPKG 182
S+ C+ CG++GH +CP G G + C+ C E GHL+K+C Y
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRDICYRCGESGHLAKDCDLQEDACYN-- 59
Query: 183 GCCKICGGVTHLARDC 198
CG H+A+DC
Sbjct: 60 -----CGRGGHIAKDC 70
>ASPGD|ASPL0000040986 [details] [associations]
symbol:AN9093 species:162425 "Emericella nidulans"
[GO:0045727 "positive regulation of translation" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0003729
"mRNA binding" evidence=IEA] [GO:0045182 "translation regulator
activity" evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0042788 "polysomal ribosome" evidence=IEA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 EMBL:BN001306 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 HOGENOM:HOG000186262 EnsemblFungi:CADANIAT00009521
OMA:QAGHISR Uniprot:C8VH53
Length = 233
Score = 167 (63.8 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 38/119 (31%), Positives = 50/119 (42%)
Query: 80 CFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGH 139
C+ CK H + CP E K C C+ GH +CP+ + + CYNC Q GH
Sbjct: 28 CYNCKQPGHESSSCPRPRTTE-TKQCYNCQGLGHVQADCPTLRLNGANGR-CYNCSQPGH 85
Query: 140 SLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
CP P G + +G + +G YP+ C CGG H ARDC
Sbjct: 86 LARNCPAPAS-GAPRGTGA----PRGGFGGGF-RGGYGGYPRAATCYKCGGPNHFARDC 138
Score = 160 (61.4 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 40/120 (33%), Positives = 54/120 (45%)
Query: 103 KICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICK 162
+ C C GH + C S S +LCYNC Q GH + CP+P T+ C+ C+
Sbjct: 6 RACYKCGNIGHYAEVCSS------SERLCYNCKQPGHESSSCPRPRT---TETKQCYNCQ 56
Query: 163 EQGHLSKNCPQ-NAHGIYPKGGCCKICGGVTHLARDCPN--KGIQGFTASSKQAMAGGER 219
GH+ +CP +G G C C HLAR+CP G T + + GG R
Sbjct: 57 GLGHVQADCPTLRLNGA---NGRCYNCSQPGHLARNCPAPASGAPRGTGAPRGGFGGGFR 113
Score = 135 (52.6 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 40/154 (25%), Positives = 63/154 (40%)
Query: 78 ESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSK-NDETESTKLC----- 131
+ C+ C+ H+ CP N C C + GH +NCP+ + T
Sbjct: 50 KQCYNCQGLGHVQADCPTLRLNGANGRCYNCSQPGHLARNCPAPASGAPRGTGAPRGGFG 109
Query: 132 --YNCGQAGHSLA----QCPQP---LQDGGTKFASCFICKEQGHLSKNCPQ-NAHGIYPK 181
+ G G+ A +C P +D + C+ C + GH+S++C N +
Sbjct: 110 GGFRGGYGGYPRAATCYKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNGGPLSSA 169
Query: 182 GGCCKICGGVTHLARDCPNKGIQGFTASSKQAMA 215
G C C H++RDCPN + T S+ A A
Sbjct: 170 GKVCYKCSQAGHISRDCPNN--EATTESAIPAAA 201
Score = 117 (46.2 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 25/75 (33%), Positives = 36/75 (48%)
Query: 73 GMKPGESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETEST--KL 130
G +C+ C H A+ C +A+ K C C + GH ++C + N S+ K+
Sbjct: 118 GYPRAATCYKCGGPNHFARDC--QAQAMK---CYACGKLGHISRDCTAPNGGPLSSAGKV 172
Query: 131 CYNCGQAGHSLAQCP 145
CY C QAGH CP
Sbjct: 173 CYKCSQAGHISRDCP 187
Score = 107 (42.7 bits), Expect = 0.00086, P = 0.00086
Identities = 25/79 (31%), Positives = 34/79 (43%)
Query: 127 STKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCK 186
S + CY CG GH C + C+ CK+ GH S +CP+ K C
Sbjct: 4 SRRACYKCGNIGHYAEVC-------SSSERLCYNCKQPGHESSSCPR-PRTTETKQ--CY 53
Query: 187 ICGGVTHLARDCPNKGIQG 205
C G+ H+ DCP + G
Sbjct: 54 NCQGLGHVQADCPTLRLNG 72
>UNIPROTKB|P62633 [details] [associations]
symbol:CNBP "Cellular nucleic acid-binding protein"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005783 "endoplasmic reticulum"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0006695 "cholesterol biosynthetic process" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 GO:GO:0005783 GO:GO:0005829
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008284
EMBL:CH471052 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0006695 eggNOG:COG5082 Gene3D:4.10.60.10
SUPFAM:SSF57756 HOGENOM:HOG000186262 KO:K09250 CTD:7555
HOVERGEN:HBG000397 OrthoDB:EOG45HRZN EMBL:M28372 EMBL:U19765
EMBL:AY329622 EMBL:AK054592 EMBL:DQ092367 EMBL:DQ091187
EMBL:AK314380 EMBL:BT019613 EMBL:AC108673 EMBL:AC135587
EMBL:BC000288 EMBL:BC014911 EMBL:BC093058 IPI:IPI00430812
IPI:IPI00430813 IPI:IPI00430814 IPI:IPI00895911 IPI:IPI00967344
PIR:A32760 RefSeq:NP_001120665.1 RefSeq:NP_001120666.1
RefSeq:NP_001120668.1 RefSeq:NP_003409.1 UniGene:Hs.518249
ProteinModelPortal:P62633 SMR:P62633 IntAct:P62633 STRING:P62633
PhosphoSite:P62633 DMDM:50401852 PaxDb:P62633 PRIDE:P62633
DNASU:7555 Ensembl:ENST00000422453 Ensembl:ENST00000446936
Ensembl:ENST00000451728 Ensembl:ENST00000502976
Ensembl:ENST00000504813 GeneID:7555 KEGG:hsa:7555 UCSC:uc003elq.4
UCSC:uc003elr.4 GeneCards:GC03M128886 HGNC:HGNC:13164 MIM:116955
MIM:602668 neXtProt:NX_P62633 Orphanet:606 PharmGKB:PA37737
InParanoid:P62633 PhylomeDB:P62633 ChiTaRS:CNBP GenomeRNAi:7555
NextBio:29559 ArrayExpress:P62633 Bgee:P62633 CleanEx:HS_CNBP
Genevestigator:P62633 GermOnline:ENSG00000169714 Uniprot:P62633
Length = 177
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 39/121 (32%), Positives = 60/121 (49%)
Query: 78 ESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQA 137
++C+ C HIAK C + + E+ + C C + GH ++C D + K CY+CG+
Sbjct: 72 DACYNCGRGGHIAKDCK-EPKREREQCCYNCGKPGHLARDC----DHADEQK-CYSCGEF 125
Query: 138 GHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARD 197
GH C TK C+ C E GH++ NC + + + C + CG HLAR+
Sbjct: 126 GHIQKDC--------TK-VKCYRCGETGHVAINCSKTS-----EVNCYR-CGESGHLARE 170
Query: 198 C 198
C
Sbjct: 171 C 171
Score = 144 (55.7 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 31/95 (32%), Positives = 45/95 (47%)
Query: 104 ICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKE 163
IC C GH K+C + D CYNCG+ GH C +P ++ + C+ C +
Sbjct: 53 ICYRCGESGHLAKDCDLQEDA------CYNCGRGGHIAKDCKEPKRE---REQCCYNCGK 103
Query: 164 QGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
GHL+++C H K C CG H+ +DC
Sbjct: 104 PGHLARDCD---HADEQK---CYSCGEFGHIQKDC 132
Score = 138 (53.6 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 35/119 (29%), Positives = 52/119 (43%)
Query: 80 CFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGH 139
CF C H A+ CP + + R RG + + + +CY CG++GH
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRG---MRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGH 62
Query: 140 SLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
C LQ+ +C+ C GH++K+C + + CC CG HLARDC
Sbjct: 63 LAKDCD--LQED-----ACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC 111
>UNIPROTKB|Q4R501 [details] [associations]
symbol:Q4R501 "Brain cDNA, clone: QnpA-14556, similar to
human zinc finger protein 9 (a cellular retroviral nucleicacid
binding protein) (ZNF9)," species:9541 "Macaca fascicularis"
[GO:0005634 "nucleus" evidence=ISS] [GO:0005783 "endoplasmic
reticulum" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0005783 GO:GO:0005829 GO:GO:0005634 GO:GO:0046872
GO:GO:0008284 GO:GO:0008270 GO:GO:0045944 GO:GO:0003676
Gene3D:4.10.60.10 SUPFAM:SSF57756 HOVERGEN:HBG000397 EMBL:AB169743
EMBL:AB174174 ProteinModelPortal:Q4R501 SMR:Q4R501 PRIDE:Q4R501
Uniprot:Q4R501
Length = 177
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 39/121 (32%), Positives = 60/121 (49%)
Query: 78 ESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQA 137
++C+ C HIAK C + + E+ + C C + GH ++C D + K CY+CG+
Sbjct: 72 DACYNCGRGGHIAKDCK-EPKREREQCCYNCGKPGHLARDC----DHADEQK-CYSCGEF 125
Query: 138 GHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARD 197
GH C TK C+ C E GH++ NC + + + C + CG HLAR+
Sbjct: 126 GHIQKDC--------TK-VKCYRCGETGHVAINCSKTS-----EVNCYR-CGESGHLARE 170
Query: 198 C 198
C
Sbjct: 171 C 171
Score = 144 (55.7 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 31/95 (32%), Positives = 45/95 (47%)
Query: 104 ICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKE 163
IC C GH K+C + D CYNCG+ GH C +P ++ + C+ C +
Sbjct: 53 ICYRCGESGHLAKDCDLQEDA------CYNCGRGGHIAKDCKEPKRE---REQCCYNCGK 103
Query: 164 QGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
GHL+++C H K C CG H+ +DC
Sbjct: 104 PGHLARDCD---HADEQK---CYSCGEFGHIQKDC 132
Score = 138 (53.6 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 35/119 (29%), Positives = 52/119 (43%)
Query: 80 CFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGH 139
CF C H A+ CP + + R RG + + + +CY CG++GH
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRG---MRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGH 62
Query: 140 SLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
C LQ+ +C+ C GH++K+C + + CC CG HLARDC
Sbjct: 63 LAKDCD--LQED-----ACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC 111
>UNIPROTKB|Q5R5R5 [details] [associations]
symbol:CNBP "Cellular nucleic acid-binding protein"
species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0005829
"cytosol" evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 GO:GO:0005783 GO:GO:0005829 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008284 GO:GO:0008270
GO:GO:0045944 GO:GO:0006351 Gene3D:4.10.60.10 SUPFAM:SSF57756
KO:K09250 CTD:7555 GeneTree:ENSGT00510000047065 HOVERGEN:HBG000397
OMA:CPNGQGG EMBL:CR860791 RefSeq:NP_001126703.1 UniGene:Pab.18652
ProteinModelPortal:Q5R5R5 SMR:Q5R5R5 PRIDE:Q5R5R5
Ensembl:ENSPPYT00000015613 GeneID:100173703 KEGG:pon:100173703
InParanoid:Q5R5R5 Uniprot:Q5R5R5
Length = 177
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 39/121 (32%), Positives = 60/121 (49%)
Query: 78 ESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQA 137
++C+ C HIAK C + + E+ + C C + GH ++C D + K CY+CG+
Sbjct: 72 DACYNCGRGGHIAKDCK-EPKREREQCCYNCGKPGHLARDC----DHADEQK-CYSCGEF 125
Query: 138 GHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARD 197
GH C TK C+ C E GH++ NC + + + C + CG HLAR+
Sbjct: 126 GHIQKDC--------TK-VKCYRCGETGHVAINCSKTS-----EVNCYR-CGESGHLARE 170
Query: 198 C 198
C
Sbjct: 171 C 171
Score = 144 (55.7 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 31/95 (32%), Positives = 45/95 (47%)
Query: 104 ICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKE 163
IC C GH K+C + D CYNCG+ GH C +P ++ + C+ C +
Sbjct: 53 ICYRCGESGHLAKDCDLQEDA------CYNCGRGGHIAKDCKEPKRE---REQCCYNCGK 103
Query: 164 QGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
GHL+++C H K C CG H+ +DC
Sbjct: 104 PGHLARDCD---HADEQK---CYSCGEFGHIQKDC 132
Score = 138 (53.6 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 35/119 (29%), Positives = 52/119 (43%)
Query: 80 CFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGH 139
CF C H A+ CP + + R RG + + + +CY CG++GH
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRG---MRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGH 62
Query: 140 SLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
C LQ+ +C+ C GH++K+C + + CC CG HLARDC
Sbjct: 63 LAKDCD--LQED-----ACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC 111
>RGD|621807 [details] [associations]
symbol:Cnbp "CCHC-type zinc finger, nucleic acid binding protein"
species:10116 "Rattus norvegicus" [GO:0003697 "single-stranded DNA
binding" evidence=IDA] [GO:0003727 "single-stranded RNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISO;ISS] [GO:0005829 "cytosol"
evidence=ISO;ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO;ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;ISS] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 RGD:621807 GO:GO:0005783
GO:GO:0005829 GO:GO:0005634 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0003727 GO:GO:0045944 GO:GO:0006351
GO:GO:0003697 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 KO:K09250 CTD:7555 HOVERGEN:HBG000397
OrthoDB:EOG45HRZN EMBL:D45254 EMBL:AF242550 EMBL:AY329624
EMBL:AB158421 EMBL:AB158422 EMBL:BC062225 IPI:IPI00201505
PIR:JC2512 RefSeq:NP_072120.1 UniGene:Rn.6187
ProteinModelPortal:P62634 SMR:P62634 STRING:P62634
PhosphoSite:P62634 PRIDE:P62634 GeneID:64530 KEGG:rno:64530
InParanoid:P62634 NextBio:613366 ArrayExpress:P62634
Genevestigator:P62634 GermOnline:ENSRNOG00000010239 Uniprot:P62634
Length = 177
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 39/121 (32%), Positives = 60/121 (49%)
Query: 78 ESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQA 137
++C+ C HIAK C + + E+ + C C + GH ++C D + K CY+CG+
Sbjct: 72 DACYNCGRGGHIAKDCK-EPKREREQCCYNCGKPGHLARDC----DHADEQK-CYSCGEF 125
Query: 138 GHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARD 197
GH C TK C+ C E GH++ NC + + + C + CG HLAR+
Sbjct: 126 GHIQKDC--------TK-VKCYRCGETGHVAINCSKTS-----EVNCYR-CGESGHLARE 170
Query: 198 C 198
C
Sbjct: 171 C 171
Score = 144 (55.7 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 31/95 (32%), Positives = 45/95 (47%)
Query: 104 ICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKE 163
IC C GH K+C + D CYNCG+ GH C +P ++ + C+ C +
Sbjct: 53 ICYRCGESGHLAKDCDLQEDA------CYNCGRGGHIAKDCKEPKRE---REQCCYNCGK 103
Query: 164 QGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
GHL+++C H K C CG H+ +DC
Sbjct: 104 PGHLARDCD---HADEQK---CYSCGEFGHIQKDC 132
Score = 138 (53.6 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 35/119 (29%), Positives = 52/119 (43%)
Query: 80 CFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGH 139
CF C H A+ CP + + R RG + + + +CY CG++GH
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRG---MRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGH 62
Query: 140 SLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
C LQ+ +C+ C GH++K+C + + CC CG HLARDC
Sbjct: 63 LAKDCD--LQED-----ACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC 111
>UNIPROTKB|P62634 [details] [associations]
symbol:Cnbp "Cellular nucleic acid-binding protein"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 RGD:621807 GO:GO:0005783 GO:GO:0005829 GO:GO:0005634
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0003727
GO:GO:0045944 GO:GO:0006351 GO:GO:0003697 eggNOG:COG5082
Gene3D:4.10.60.10 SUPFAM:SSF57756 HOGENOM:HOG000186262 KO:K09250
CTD:7555 HOVERGEN:HBG000397 OrthoDB:EOG45HRZN EMBL:D45254
EMBL:AF242550 EMBL:AY329624 EMBL:AB158421 EMBL:AB158422
EMBL:BC062225 IPI:IPI00201505 PIR:JC2512 RefSeq:NP_072120.1
UniGene:Rn.6187 ProteinModelPortal:P62634 SMR:P62634 STRING:P62634
PhosphoSite:P62634 PRIDE:P62634 GeneID:64530 KEGG:rno:64530
InParanoid:P62634 NextBio:613366 ArrayExpress:P62634
Genevestigator:P62634 GermOnline:ENSRNOG00000010239 Uniprot:P62634
Length = 177
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 39/121 (32%), Positives = 60/121 (49%)
Query: 78 ESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQA 137
++C+ C HIAK C + + E+ + C C + GH ++C D + K CY+CG+
Sbjct: 72 DACYNCGRGGHIAKDCK-EPKREREQCCYNCGKPGHLARDC----DHADEQK-CYSCGEF 125
Query: 138 GHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARD 197
GH C TK C+ C E GH++ NC + + + C + CG HLAR+
Sbjct: 126 GHIQKDC--------TK-VKCYRCGETGHVAINCSKTS-----EVNCYR-CGESGHLARE 170
Query: 198 C 198
C
Sbjct: 171 C 171
Score = 144 (55.7 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 31/95 (32%), Positives = 45/95 (47%)
Query: 104 ICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKE 163
IC C GH K+C + D CYNCG+ GH C +P ++ + C+ C +
Sbjct: 53 ICYRCGESGHLAKDCDLQEDA------CYNCGRGGHIAKDCKEPKRE---REQCCYNCGK 103
Query: 164 QGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
GHL+++C H K C CG H+ +DC
Sbjct: 104 PGHLARDCD---HADEQK---CYSCGEFGHIQKDC 132
Score = 138 (53.6 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 35/119 (29%), Positives = 52/119 (43%)
Query: 80 CFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGH 139
CF C H A+ CP + + R RG + + + +CY CG++GH
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRG---MRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGH 62
Query: 140 SLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
C LQ+ +C+ C GH++K+C + + CC CG HLARDC
Sbjct: 63 LAKDCD--LQED-----ACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC 111
>UNIPROTKB|Q3T0Q6 [details] [associations]
symbol:CNBP "Cellular nucleic acid-binding protein"
species:9913 "Bos taurus" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 GO:GO:0005783 GO:GO:0005829
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008284
GO:GO:0008270 GO:GO:0045944 GO:GO:0006351 eggNOG:COG5082
Gene3D:4.10.60.10 SUPFAM:SSF57756 HOGENOM:HOG000186262 KO:K09250
OMA:FQFMSSS EMBL:BC102298 IPI:IPI00697831 RefSeq:NP_001029396.1
UniGene:Bt.9541 ProteinModelPortal:Q3T0Q6 STRING:Q3T0Q6
PRIDE:Q3T0Q6 Ensembl:ENSBTAT00000016130 GeneID:504831
KEGG:bta:504831 CTD:7555 GeneTree:ENSGT00510000047065
HOVERGEN:HBG000397 InParanoid:Q3T0Q6 OrthoDB:EOG45HRZN
NextBio:20866851 Uniprot:Q3T0Q6
Length = 170
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 39/121 (32%), Positives = 60/121 (49%)
Query: 78 ESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQA 137
++C+ C HIAK C + + E+ + C C + GH ++C D + K CY+CG+
Sbjct: 65 DACYNCGRGGHIAKDCK-EPKREREQCCYNCGKPGHLARDC----DHADEQK-CYSCGEF 118
Query: 138 GHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARD 197
GH C TK C+ C E GH++ NC + + + C + CG HLAR+
Sbjct: 119 GHIQKDC--------TK-VKCYRCGETGHVAINCSKTS-----EVNCYR-CGESGHLARE 163
Query: 198 C 198
C
Sbjct: 164 C 164
Score = 144 (55.7 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 31/95 (32%), Positives = 45/95 (47%)
Query: 104 ICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKE 163
IC C GH K+C + D CYNCG+ GH C +P ++ + C+ C +
Sbjct: 46 ICYRCGESGHLAKDCDLQEDA------CYNCGRGGHIAKDCKEPKRE---REQCCYNCGK 96
Query: 164 QGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
GHL+++C H K C CG H+ +DC
Sbjct: 97 PGHLARDCD---HADEQK---CYSCGEFGHIQKDC 125
Score = 131 (51.2 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 34/109 (31%), Positives = 49/109 (44%)
Query: 105 CLVCRRRGHTLKNCPS------------KNDETESTKL---CYNCGQAGHSLAQCPQPLQ 149
C C R GH + CP+ + + S+ L CY CG++GH C LQ
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCD--LQ 63
Query: 150 DGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
+ +C+ C GH++K+C + + CC CG HLARDC
Sbjct: 64 ED-----ACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC 104
>UNIPROTKB|F1N8C2 [details] [associations]
symbol:CNBP "Cellular nucleic acid-binding protein"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0005783
GO:GO:0005829 GO:GO:0005634 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0045944 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 OMA:FQFMSSS GeneTree:ENSGT00510000047065
IPI:IPI00582111 EMBL:AADN02013931 Ensembl:ENSGALT00000036274
ArrayExpress:F1N8C2 Uniprot:F1N8C2
Length = 171
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 39/121 (32%), Positives = 60/121 (49%)
Query: 78 ESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQA 137
++C+ C HIAK C + + E+ + C C + GH ++C D + K CY+CG+
Sbjct: 66 DACYNCGRGGHIAKDCK-EPKREREQCCYNCGKPGHLARDC----DHADEQK-CYSCGEF 119
Query: 138 GHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARD 197
GH C TK C+ C E GH++ NC + + + C + CG HLAR+
Sbjct: 120 GHIQKDC--------TK-VKCYRCGETGHVAINCSKTS-----EVNCYR-CGESGHLARE 164
Query: 198 C 198
C
Sbjct: 165 C 165
Score = 144 (55.7 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 31/95 (32%), Positives = 45/95 (47%)
Query: 104 ICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKE 163
IC C GH K+C + D CYNCG+ GH C +P ++ + C+ C +
Sbjct: 47 ICYRCGESGHLAKDCDLQEDA------CYNCGRGGHIAKDCKEPKRE---REQCCYNCGK 97
Query: 164 QGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
GHL+++C H K C CG H+ +DC
Sbjct: 98 PGHLARDCD---HADEQK---CYSCGEFGHIQKDC 126
Score = 126 (49.4 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 34/110 (30%), Positives = 48/110 (43%)
Query: 105 CLVCRRRGHTLKNCPS-------------KNDETESTKL---CYNCGQAGHSLAQCPQPL 148
C C R GH + CP+ + S+ L CY CG++GH C L
Sbjct: 6 CFKCGRTGHWARECPTGIGRGRGMRSRGRAGFQFMSSSLPDICYRCGESGHLAKDCD--L 63
Query: 149 QDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
Q+ +C+ C GH++K+C + + CC CG HLARDC
Sbjct: 64 QED-----ACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC 105
>ZFIN|ZDB-GENE-030131-5045 [details] [associations]
symbol:cnbpa "CCHC-type zinc finger, nucleic acid
binding protein a" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0060322 "head development" evidence=IMP]
[GO:0014029 "neural crest formation" evidence=IMP] [GO:0014036
"neural crest cell fate specification" evidence=IMP] [GO:0051216
"cartilage development" evidence=IMP] [GO:0003697 "single-stranded
DNA binding" evidence=IDA] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
ZFIN:ZDB-GENE-030131-5045 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
GO:GO:0003697 GO:GO:0051216 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 HOVERGEN:HBG000397 GO:GO:0060322 GO:GO:0014036
InterPro:IPR025836 Pfam:PF14392 EMBL:AY228240 IPI:IPI00481422
UniGene:Dr.31379 STRING:Q801Z9 InParanoid:Q801Z9
ArrayExpress:Q801Z9 Uniprot:Q801Z9
Length = 163
Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 34/106 (32%), Positives = 48/106 (45%)
Query: 105 CLVCRRRGHTLKNCPS------KNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASC 158
C C R GH +KNCP+ + CY CG+ GH C Q +D +C
Sbjct: 8 CFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQT-ED------AC 60
Query: 159 FICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDCPNKGIQ 204
+ C GH+S++C + + CC CG H+ARDC + Q
Sbjct: 61 YNCHRSGHISRDCKEPKK---EREQCCYNCGKAGHVARDCDHANEQ 103
Score = 154 (59.3 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 42/131 (32%), Positives = 57/131 (43%)
Query: 80 CFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGH 139
C+ C + HIA+ C + C C R GH ++C K + E + CYNCG+AGH
Sbjct: 40 CYRCGEQGHIARDCEQTED-----ACYNCHRSGHISRDC--KEPKKEREQCCYNCGKAGH 92
Query: 140 SLAQCPQPLQD-----GG----TKFAS---CFICKEQGHLSKNCPQNAHGIYPKGGCCKI 187
C + GG K C+ C E GH++ C + A + C
Sbjct: 93 VARDCDHANEQKCYSCGGFGHFQKLCDKVKCYRCGEIGHVAVQCSK-ATEVN-----CYN 146
Query: 188 CGGVTHLARDC 198
CG HLARDC
Sbjct: 147 CGKTGHLARDC 157
Score = 148 (57.2 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 39/138 (28%), Positives = 61/138 (44%)
Query: 80 CFICKAKEHIAKHCPMKAEWE-------KNKICLVCRRRGHTLKNCPSKNDETESTKLCY 132
CF C H K+CP K+ C C +GH ++C ++TE CY
Sbjct: 8 CFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDC----EQTEDA--CY 61
Query: 133 NCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQ-NAHGIYPKGG-------C 184
NC ++GH C +P ++ + C+ C + GH++++C N Y GG C
Sbjct: 62 NCHRSGHISRDCKEPKKE---REQCCYNCGKAGHVARDCDHANEQKCYSCGGFGHFQKLC 118
Query: 185 CKI----CGGVTHLARDC 198
K+ CG + H+A C
Sbjct: 119 DKVKCYRCGEIGHVAVQC 136
Score = 131 (51.2 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 28/107 (26%), Positives = 51/107 (47%)
Query: 78 ESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDET--------ESTK 129
++C+ C HI++ C + + E+ + C C + GH ++C N++ K
Sbjct: 58 DACYNCHRSGHISRDCK-EPKKEREQCCYNCGKAGHVARDCDHANEQKCYSCGGFGHFQK 116
Query: 130 LC-----YNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNC 171
LC Y CG+ GH QC + + +C+ C + GHL+++C
Sbjct: 117 LCDKVKCYRCGEIGHVAVQCSKATE------VNCYNCGKTGHLARDC 157
Score = 118 (46.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 28/82 (34%), Positives = 40/82 (48%)
Query: 127 STKLCYNCGQAGHSLAQCPQPLQDGGT-----KFASCFICKEQGHLSKNCPQNAHGIYPK 181
ST C+ CG++GH + CP + G K C+ C EQGH++++C Q Y
Sbjct: 4 STSECFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDACYN- 62
Query: 182 GGCCKICGGVTHLARDC--PNK 201
C G H++RDC P K
Sbjct: 63 ---CHRSG---HISRDCKEPKK 78
>UNIPROTKB|J9NRQ2 [details] [associations]
symbol:ZCCHC13 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 GeneTree:ENSGT00510000047065 EMBL:AAEX03026520
Ensembl:ENSCAFT00000049751 OMA:EEQKCYS Uniprot:J9NRQ2
Length = 146
Score = 150 (57.9 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 37/119 (31%), Positives = 51/119 (42%)
Query: 80 CFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGH 139
C+ C H AK+C + + IC C R GH K+C E E + CY CG+ GH
Sbjct: 48 CYRCGKSGHHAKNCDLLED-----ICYNCGRSGHIAKDCIEPKRERE--QCCYTCGRPGH 100
Query: 140 SLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
C + + C+ C E GH+ K+C Q C CG H+A +C
Sbjct: 101 LARDCDRQEEQ------KCYSCGEYGHIQKDCTQVK---------CYRCGETGHVAINC 144
Score = 147 (56.8 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 31/95 (32%), Positives = 46/95 (48%)
Query: 104 ICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKE 163
IC C + GH KNC D +CYNCG++GH C +P ++ + C+ C
Sbjct: 47 ICYRCGKSGHHAKNCDLLED------ICYNCGRSGHIAKDCIEPKRE---REQCCYTCGR 97
Query: 164 QGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
GHL+++C + K C CG H+ +DC
Sbjct: 98 PGHLARDCDRQEE---QK---CYSCGEYGHIQKDC 126
Score = 140 (54.3 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 38/121 (31%), Positives = 53/121 (43%)
Query: 78 ESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQA 137
+ CF C H A+ CP + + + R RG C S N +CY CG++
Sbjct: 4 KECFRCGRSGHWARGCP-RVGGSRGR---GARGRGRG-SPCSSTN----LPDICYRCGKS 54
Query: 138 GHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARD 197
GH C L+D C+ C GH++K+C + + CC CG HLARD
Sbjct: 55 GHHAKNCDL-LED------ICYNCGRSGHIAKDCIEPKR---EREQCCYTCGRPGHLARD 104
Query: 198 C 198
C
Sbjct: 105 C 105
>UNIPROTKB|F1NI84 [details] [associations]
symbol:CNBP "Cellular nucleic acid-binding protein"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0005783
GO:GO:0005829 GO:GO:0005634 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0045944 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 GeneTree:ENSGT00510000047065 EMBL:AADN02013931
IPI:IPI00819060 Ensembl:ENSGALT00000008010 ArrayExpress:F1NI84
Uniprot:F1NI84
Length = 105
Score = 146 (56.5 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 30/92 (32%), Positives = 43/92 (46%)
Query: 80 CFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGH 139
C+ C H+AK C ++ + C C R GH K+C K + E + CYNCG+ GH
Sbjct: 9 CYRCGESGHLAKDCDLQED-----ACYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGH 61
Query: 140 SLAQCPQPLQDGGTKFASCFICKEQGHLSKNC 171
C + C+ C E GH+ K+C
Sbjct: 62 LARDCDHADEQ------KCYSCGEFGHIQKDC 87
Score = 144 (55.7 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 31/95 (32%), Positives = 45/95 (47%)
Query: 104 ICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKE 163
IC C GH K+C + D CYNCG+ GH C +P ++ + C+ C +
Sbjct: 8 ICYRCGESGHLAKDCDLQEDA------CYNCGRGGHIAKDCKEPKRE---REQCCYNCGK 58
Query: 164 QGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
GHL+++C H K C CG H+ +DC
Sbjct: 59 PGHLARDCD---HADEQK---CYSCGEFGHIQKDC 87
Score = 138 (53.6 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 31/94 (32%), Positives = 47/94 (50%)
Query: 78 ESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQA 137
++C+ C HIAK C + + E+ + C C + GH ++C D + K CY+CG+
Sbjct: 27 DACYNCGRGGHIAKDCK-EPKREREQCCYNCGKPGHLARDC----DHADEQK-CYSCGEF 80
Query: 138 GHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNC 171
GH C TK C+ C E GH++ NC
Sbjct: 81 GHIQKDC--------TK-VKCYRCGETGHVAINC 105
>UNIPROTKB|G4MRA3 [details] [associations]
symbol:MGG_13778 "Zinc finger protein GIS2" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 EMBL:CM001231 KO:K09250 RefSeq:XP_003710840.1
ProteinModelPortal:G4MRA3 EnsemblFungi:MGG_13778T0 GeneID:5048998
KEGG:mgr:MGG_13778 Uniprot:G4MRA3
Length = 230
Score = 156 (60.0 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 35/98 (35%), Positives = 44/98 (44%)
Query: 103 KICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICK 162
+ C C GH + C S + +LCYNC Q GH CP P T+ C+ C+
Sbjct: 7 RACYKCGNVGHYAEVCSS------AERLCYNCKQPGHESNGCPLPRT---TEAKQCYHCQ 57
Query: 163 EQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDCPN 200
GH+ +CP G C CG HLAR CPN
Sbjct: 58 GLGHVQADCPTLRLSGAGSNGRCYSCGQPGHLARACPN 95
Score = 151 (58.2 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 33/99 (33%), Positives = 46/99 (46%)
Query: 79 SCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAG 138
+C+ C H A+ C AE ++C C++ GH CP T K CY+C G
Sbjct: 8 ACYKCGNVGHYAEVCS-SAE----RLCYNCKQPGHESNGCPLPR--TTEAKQCYHCQGLG 60
Query: 139 HSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHG 177
H A CP G C+ C + GHL++ CP N +G
Sbjct: 61 HVQADCPTLRLSGAGSNGRCYSCGQPGHLARACP-NPNG 98
Score = 148 (57.2 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 36/120 (30%), Positives = 47/120 (39%)
Query: 80 CFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPS-KNDETESTKLCYNCGQAG 138
C+ CK H + CP+ E K C C+ GH +CP+ + S CY+CGQ G
Sbjct: 29 CYNCKQPGHESNGCPLPRTTEA-KQCYHCQGLGHVQADCPTLRLSGAGSNGRCYSCGQPG 87
Query: 139 HSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
H CP P G G+ + + C CGG H ARDC
Sbjct: 88 HLARACPNP---NGANMGRGAPVPRGGYGGGYGGRGGFAGGARPATCYKCGGPNHFARDC 144
Score = 129 (50.5 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 29/87 (33%), Positives = 42/87 (48%)
Query: 73 GMKPGESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETEST--KL 130
G +P +C+ C H A+ C +A+ K C C + GH ++C + N +T K
Sbjct: 125 GARPA-TCYKCGGPNHFARDC--QAQAMK---CYACGKLGHISRDCTAPNGGPLNTVGKT 178
Query: 131 CYNCGQAGHSLAQCPQPLQDGGTKFAS 157
CY CG+AGH QCP G A+
Sbjct: 179 CYQCGEAGHISRQCPTKATANGDSNAA 205
Score = 119 (46.9 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 34/136 (25%), Positives = 55/136 (40%)
Query: 71 VPGMKPGESCFICKAKEHIAKHCP-MKAEWE-KNKICLVCRRRGHTLKNCPSKNDETEST 128
+P + C+ C+ H+ CP ++ N C C + GH + CP+ N
Sbjct: 44 LPRTTEAKQCYHCQGLGHVQADCPTLRLSGAGSNGRCYSCGQPGHLARACPNPNGANMGR 103
Query: 129 KLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKIC 188
G G+ + GG + A+C+ C H +++C A C C
Sbjct: 104 GAPVPRG--GYGGGYGGRGGFAGGARPATCYKCGGPNHFARDCQAQAMK-------CYAC 154
Query: 189 GGVTHLARDC--PNKG 202
G + H++RDC PN G
Sbjct: 155 GKLGHISRDCTAPNGG 170
Score = 112 (44.5 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 29/96 (30%), Positives = 39/96 (40%)
Query: 131 CYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQ-NAHGIYPKGGCCKICG 189
CY CG H C Q K C+ C + GH+S++C N + G C CG
Sbjct: 131 CYKCGGPNHFARDC----QAQAMK---CYACGKLGHISRDCTAPNGGPLNTVGKTCYQCG 183
Query: 190 GVTHLARDCPNKGIQGFTASSKQAMAGGERPTGQVT 225
H++R CP K S+ A A + P T
Sbjct: 184 EAGHISRQCPTKATANGD-SNAAAPAHNDAPMPDAT 218
Score = 111 (44.1 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 25/74 (33%), Positives = 36/74 (48%)
Query: 105 CLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGG---TKFASCFIC 161
C C H ++C + ++ K CY CG+ GH C P +GG T +C+ C
Sbjct: 131 CYKCGGPNHFARDC-----QAQAMK-CYACGKLGHISRDCTAP--NGGPLNTVGKTCYQC 182
Query: 162 KEQGHLSKNCPQNA 175
E GH+S+ CP A
Sbjct: 183 GEAGHISRQCPTKA 196
Score = 51 (23.0 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 69 LRVPGMKPGESCFICKAKEHIAKHCP 94
LR+ G C+ C H+A+ CP
Sbjct: 69 LRLSGAGSNGRCYSCGQPGHLARACP 94
>ZFIN|ZDB-GENE-030131-7782 [details] [associations]
symbol:cnbpb "CCHC-type zinc finger, nucleic acid
binding protein b" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
ZFIN:ZDB-GENE-030131-7782 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:4.10.60.10 SUPFAM:SSF57756 GeneTree:ENSGT00510000047065
InterPro:IPR025836 Pfam:PF14392 EMBL:CR855375 IPI:IPI00862287
Ensembl:ENSDART00000104520 Bgee:E7FCQ0 Uniprot:E7FCQ0
Length = 243
Score = 157 (60.3 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 45/151 (29%), Positives = 64/151 (42%)
Query: 57 EKSMKRVFTRHPLRVPG--MKPGESCFICKAKEHIAKHCPMKAEWE-------KNKICLV 107
E +RV T RV M E CF C H K+CP K+ C
Sbjct: 65 ENKQQRV-TSPSCRVKSEDMSSNE-CFGCGRTGHWIKNCPNAGRGRGKGRGRGKDLFCYR 122
Query: 108 CRRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHL 167
C GH ++C + TE CYNCG+ GH C +P ++ + C+ C + GH+
Sbjct: 123 CGEPGHVARDC----ERTEDA--CYNCGRGGHISRDCKEPKKE---REQVCYNCGKAGHM 173
Query: 168 SKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
+++C H K C CGG H+ + C
Sbjct: 174 ARDCD---HANEQK---CYSCGGFGHIQKGC 198
Score = 153 (58.9 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 36/118 (30%), Positives = 53/118 (44%)
Query: 93 CPMKAEWEKNKICLVCRRRGHTLKNCPS------KNDETESTKLCYNCGQAGHSLAQCPQ 146
C +K+E + C C R GH +KNCP+ K CY CG+ GH C +
Sbjct: 76 CRVKSEDMSSNECFGCGRTGHWIKNCPNAGRGRGKGRGRGKDLFCYRCGEPGHVARDCER 135
Query: 147 PLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDCPNKGIQ 204
+D +C+ C GH+S++C + + C CG H+ARDC + Q
Sbjct: 136 T-ED------ACYNCGRGGHISRDCKEPKK---EREQVCYNCGKAGHMARDCDHANEQ 183
Score = 144 (55.7 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 35/119 (29%), Positives = 51/119 (42%)
Query: 80 CFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGH 139
C+ C H+A+ C + C C R GH ++C K + E ++CYNCG+AGH
Sbjct: 120 CYRCGEPGHVARDCERTED-----ACYNCGRGGHISRDC--KEPKKEREQVCYNCGKAGH 172
Query: 140 SLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
C + C+ C GH+ K C K C + CG + H+A C
Sbjct: 173 MARDCDHANEQ------KCYSCGGFGHIQKGCE--------KVKCYR-CGEIGHVAVQC 216
Score = 130 (50.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 28/108 (25%), Positives = 51/108 (47%)
Query: 78 ESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDET------------ 125
++C+ C HI++ C + + E+ ++C C + GH ++C N++
Sbjct: 138 DACYNCGRGGHISRDCK-EPKKEREQVCYNCGKAGHMARDCDHANEQKCYSCGGFGHIQK 196
Query: 126 --ESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNC 171
E K CY CG+ GH QC + + +C+ C + GH++K C
Sbjct: 197 GCEKVK-CYRCGEIGHVAVQCSKASE------VNCYNCGKSGHVAKEC 237
>UNIPROTKB|G3MZ41 [details] [associations]
symbol:ZCCHC13 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
GeneTree:ENSGT00510000047065 OMA:SSKECFK EMBL:DAAA02072583
Ensembl:ENSBTAT00000001124 Uniprot:G3MZ41
Length = 175
Score = 142 (55.0 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 35/107 (32%), Positives = 51/107 (47%)
Query: 104 ICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKE 163
IC C + GH K+C +D +CYNCG++GH C +P ++G C+ C
Sbjct: 51 ICYRCGKFGHYAKDCDLLDD------ICYNCGKSGHIAKDCAEPKREGER---CCYTCGR 101
Query: 164 QGHLSKNCP-QNAHGIYP--KGG-----C----CKICGGVTHLARDC 198
GHL+++C Q Y K G C C CG + H+A +C
Sbjct: 102 PGHLARDCDRQEERKCYSCGKSGHIQKYCTQVKCYRCGEIGHVAINC 148
Score = 142 (55.0 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 35/109 (32%), Positives = 50/109 (45%)
Query: 80 CFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGH 139
C+ C HIAK C + + E + C C R GH ++C D E K CY+CG++GH
Sbjct: 72 CYNCGKSGHIAKDCA-EPKREGERCCYTCGRPGHLARDC----DRQEERK-CYSCGKSGH 125
Query: 140 SLAQCPQPL-----QDGGTKF-------ASCFICKEQGHLSKNCPQNAH 176
C Q + G +C+ C E GHL++ CP A+
Sbjct: 126 IQKYCTQVKCYRCGEIGHVAINCRKMNEVNCYRCGESGHLTRECPIEAN 174
Score = 142 (55.0 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 39/132 (29%), Positives = 53/132 (40%)
Query: 80 CFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGH 139
C+ C H AK C + + IC C + GH K+C E E + CY CG+ GH
Sbjct: 52 CYRCGKFGHYAKDCDLLDD-----ICYNCGKSGHIAKDCAEPKREGE--RCCYTCGRPGH 104
Query: 140 SLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQ-NAHGIYPKG----GC-------CKI 187
C + + C+ C + GH+ K C Q + G C C
Sbjct: 105 LARDCDRQEE------RKCYSCGKSGHIQKYCTQVKCYRCGEIGHVAINCRKMNEVNCYR 158
Query: 188 CGGVTHLARDCP 199
CG HL R+CP
Sbjct: 159 CGESGHLTRECP 170
Score = 131 (51.2 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 40/122 (32%), Positives = 53/122 (43%)
Query: 78 ESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQA 137
+ CF C H A C K + + R RGH + C S T +CY CG+
Sbjct: 8 KECFKCGRVGHWAPACS-KGGGARGR---GARGRGHGAQ-CSS----TTLPVICYRCGKF 58
Query: 138 GHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGG-CCKICGGVTHLAR 196
GH C L D C+ C + GH++K+C + +G CC CG HLAR
Sbjct: 59 GHYAKDCDL-LDD------ICYNCGKSGHIAKDCAEPKR----EGERCCYTCGRPGHLAR 107
Query: 197 DC 198
DC
Sbjct: 108 DC 109
>TAIR|locus:2005719 [details] [associations]
symbol:AT1G75560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006457 "protein folding" evidence=RCA] [GO:0009408 "response
to heat" evidence=RCA] [GO:0009644 "response to high light
intensity" evidence=RCA] [GO:0034976 "response to endoplasmic
reticulum stress" evidence=RCA] [GO:0042542 "response to hydrogen
peroxide" evidence=RCA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:BT005709
EMBL:AK118306 EMBL:AK175193 EMBL:AK175269 EMBL:AK175304
EMBL:AK175841 EMBL:AK176208 EMBL:AK176516 EMBL:AK176616
EMBL:AK176626 IPI:IPI00543969 RefSeq:NP_001077828.1
RefSeq:NP_565112.1 UniGene:At.34758 ProteinModelPortal:Q8GXC5
SMR:Q8GXC5 PaxDb:Q8GXC5 PRIDE:Q8GXC5 EnsemblPlants:AT1G75560.1
EnsemblPlants:AT1G75560.2 GeneID:843892 KEGG:ath:AT1G75560
TAIR:At1g75560 InParanoid:Q8GXC5 OMA:NEGICHS PhylomeDB:Q8GXC5
ProtClustDB:CLSN2689214 ArrayExpress:Q8GXC5 Genevestigator:Q8GXC5
Uniprot:Q8GXC5
Length = 257
Score = 155 (59.6 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 43/152 (28%), Positives = 65/152 (42%)
Query: 53 PNRNEKSMKRVFTRHPLRVPGMKPGESCFICKAKEHIAKHC--P--MKAEWEKNKICLVC 108
P+R E+ +R F++ L +PG C + + +C P + AE C C
Sbjct: 40 PSRREREPRRAFSQGNLCNNCKRPGHFARDC-SNVSVCNNCGLPGHIAAECTAESRCWNC 98
Query: 109 RRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLS 168
R GH NC ++ +C++CG++GH C G C C +QGHL+
Sbjct: 99 REPGHVASNCSNEG-------ICHSCGKSGHRARDCSNSDSRAGD-LRLCNNCFKQGHLA 150
Query: 169 KNCPQNAHGIYPKGGCCKICGGVTHLARDCPN 200
+C + CK C H+ARDC N
Sbjct: 151 ADCTNDK--------ACKNCRTSGHIARDCRN 174
Score = 148 (57.2 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 34/120 (28%), Positives = 54/120 (45%)
Query: 80 CFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGH 139
C+ C+ H+A +C + IC C + GH ++C + + +LC NC + GH
Sbjct: 95 CWNCREPGHVASNCSNEG------ICHSCGKSGHRARDCSNSDSRAGDLRLCNNCFKQGH 148
Query: 140 SLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDCP 199
A C T +C C+ GH++++C + P C IC H+AR CP
Sbjct: 149 LAADC--------TNDKACKNCRTSGHIARDCRND-----P---VCNICSISGHVARHCP 192
Score = 36 (17.7 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 3 SKRQREARKRFKE 15
S+R+RE R+ F +
Sbjct: 41 SRREREPRRAFSQ 53
>UNIPROTKB|Q8WW36 [details] [associations]
symbol:ZCCHC13 "Zinc finger CCHC domain-containing protein
13" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 eggNOG:COG5082
Gene3D:4.10.60.10 SUPFAM:SSF57756 HOGENOM:HOG000186262
HOVERGEN:HBG000397 EMBL:BC021176 IPI:IPI00397484 RefSeq:NP_976048.1
UniGene:Hs.157231 ProteinModelPortal:Q8WW36 SMR:Q8WW36
IntAct:Q8WW36 MINT:MINT-2879587 PhosphoSite:Q8WW36 DMDM:71152962
PRIDE:Q8WW36 DNASU:389874 Ensembl:ENST00000339534 GeneID:389874
KEGG:hsa:389874 UCSC:uc004ebs.4 CTD:389874 GeneCards:GC0XP073524
HGNC:HGNC:31749 HPA:HPA003382 neXtProt:NX_Q8WW36
PharmGKB:PA134926925 InParanoid:Q8WW36 OMA:SSKECFK PhylomeDB:Q8WW36
GenomeRNAi:389874 NextBio:103180 Bgee:Q8WW36 CleanEx:HS_ZCCHC13
Genevestigator:Q8WW36 GermOnline:ENSG00000187969 Uniprot:Q8WW36
Length = 166
Score = 141 (54.7 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 33/101 (32%), Positives = 46/101 (45%)
Query: 77 GESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQ 136
G C+ C HIAK C + E+ + C C R GH ++C D + K CY+CG+
Sbjct: 64 GNICYNCGRSGHIAKDCK-DPKRERRQHCYTCGRLGHLARDC----DRQKEQK-CYSCGK 117
Query: 137 AGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHG 177
GH C Q C+ C E GH++ NC + G
Sbjct: 118 LGHIQKDCAQ---------VKCYRCGEIGHVAINCSKARPG 149
Score = 134 (52.2 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 28/94 (29%), Positives = 43/94 (45%)
Query: 105 CLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQ 164
C C G KNC + +CYNCG++GH C P ++ + C+ C
Sbjct: 47 CYCCGESGRNAKNCVLLGN------ICYNCGRSGHIAKDCKDPKRE---RRQHCYTCGRL 97
Query: 165 GHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDC 198
GHL+++C + K C CG + H+ +DC
Sbjct: 98 GHLARDCDRQ------KEQKCYSCGKLGHIQKDC 125
>UNIPROTKB|Q65XV7 [details] [associations]
symbol:P0016H04.11 "Os05g0111000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001878 InterPro:IPR004365
InterPro:IPR004591 InterPro:IPR007199 Pfam:PF00098 Pfam:PF01336
Pfam:PF04057 PROSITE:PS50158 SMART:SM00343 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0006260 GO:GO:0008270
EMBL:AP008211 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:CM000142 InterPro:IPR013955
Pfam:PF08646 eggNOG:COG1599 KO:K07466 TIGRFAMs:TIGR00617
HOGENOM:HOG000162322 EMBL:AC079356 RefSeq:NP_001054445.1
UniGene:Os.53618 IntAct:Q65XV7 EnsemblPlants:LOC_Os05g02040.1
GeneID:4337594 KEGG:osa:4337594 OMA:RWTIKVR ProtClustDB:CLSN2695308
Uniprot:Q65XV7
Length = 951
Score = 164 (62.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 46/142 (32%), Positives = 64/142 (45%)
Query: 78 ESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQA 137
++C IC A H A+ C + A+ + + G+ N + N +E CY C Q
Sbjct: 814 QTCSICGANGHSAQICHVGADMDMQETSAGGSSMGNY--NSIAGNGSSE----CYKCKQP 867
Query: 138 GHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARD 197
GH CP GG + CF CK+ GH S++CP + G G C C H ARD
Sbjct: 868 GHYARDCPGQ-STGGLE---CFKCKQPGHFSRDCPVQSTG----GSECFKCKQPGHFARD 919
Query: 198 CPNK--GIQGFTASSKQAMAGG 217
CP + G Q T + A + G
Sbjct: 920 CPGQSTGAQHQTYGNNVAASRG 941
>TAIR|locus:2827810 [details] [associations]
symbol:CSP3 "cold shock domain protein 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009409 "response to cold"
evidence=IEP;IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0009631
"cold acclimation" evidence=IMP] [GO:0032508 "DNA duplex unwinding"
evidence=IDA] InterPro:IPR001878 InterPro:IPR002059
InterPro:IPR011129 Pfam:PF00098 Pfam:PF00313 PRINTS:PR00050
PROSITE:PS50158 SMART:SM00343 SMART:SM00357 Prosite:PS00352
GO:GO:0005634 GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0009631 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 KO:K09250 InterPro:IPR019844 eggNOG:COG1278
ProtClustDB:CLSN2685328 GO:GO:0032508 HSSP:O54310 EMBL:AB308041
EMBL:AY035133 EMBL:AY062985 IPI:IPI00519047 PIR:T00837
RefSeq:NP_565427.1 UniGene:At.19464 ProteinModelPortal:Q94C69
SMR:Q94C69 PaxDb:Q94C69 PRIDE:Q94C69 EnsemblPlants:AT2G17870.1
GeneID:816297 KEGG:ath:AT2G17870 TAIR:At2g17870 InParanoid:Q94C69
OMA:MEDQSAA PhylomeDB:Q94C69 Genevestigator:Q94C69 Uniprot:Q94C69
Length = 301
Score = 143 (55.4 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 38/138 (27%), Positives = 53/138 (38%)
Query: 77 GESCFICKAKEHIAKHCPMKAEWEK----------NKICLVCRRRGHTLKNCPSKNDETE 126
G C+ C H+AK C + + C +C GH ++C
Sbjct: 160 GRPCYSCGEVGHLAKDCRGGSGGNRYGGGGGRGSGGDGCYMCGGVGHFARDCRQNGGGNV 219
Query: 127 ST--KLCYNCGQAGHSLAQCPQPLQDGGTKFA-SCFICKEQGHLSKNCPQNAHGIYPKGG 183
CY CG GH C + GG +C+ C GHL+++C + G GG
Sbjct: 220 GGGGSTCYTCGGVGHIAKVCTSKIPSGGGGGGRACYECGGTGHLARDCDRRGSGSSGGGG 279
Query: 184 C---CKICGGVTHLARDC 198
C ICG H AR+C
Sbjct: 280 GSNKCFICGKEGHFAREC 297
Score = 134 (52.2 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 33/84 (39%), Positives = 38/84 (45%)
Query: 131 CYNCGQAGHSLAQCPQP----LQDGGTKFASCFICKEQGHLSKNCPQNAHGI-YPKGGC- 184
CY CG GH C Q GG C+ C E GHL+K+C + G Y GG
Sbjct: 132 CYMCGDVGHFARDCRQSGGGNSGGGGGGGRPCYSCGEVGHLAKDCRGGSGGNRYGGGGGR 191
Query: 185 ------CKICGGVTHLARDCPNKG 202
C +CGGV H ARDC G
Sbjct: 192 GSGGDGCYMCGGVGHFARDCRQNG 215
Score = 129 (50.5 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 29/77 (37%), Positives = 36/77 (46%)
Query: 131 CYNCGQAGHSLAQCPQPLQDGGTKF----ASCFICKEQGHLSKNCPQNAHGIYPKGG-CC 185
CY CG GH C Q +GG ++C+ C GH++K C GG C
Sbjct: 198 CYMCGGVGHFARDCRQ---NGGGNVGGGGSTCYTCGGVGHIAKVCTSKIPSGGGGGGRAC 254
Query: 186 KICGGVTHLARDCPNKG 202
CGG HLARDC +G
Sbjct: 255 YECGGTGHLARDCDRRG 271
Score = 125 (49.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 39/135 (28%), Positives = 59/135 (43%)
Query: 101 KNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCP-----QPLQDGGTKF 155
K K V G +L +N S C+NCG+ GH C + GG +
Sbjct: 68 KTKAIEVTAPGGGSLNK--KENSSRGSGGNCFNCGEVGHMAKDCDGGSGGKSFGGGGGRR 125
Query: 156 AS----CFICKEQGHLSKNCPQNAHGIYPKGGC----CKICGGVTHLARDCPNKGIQGFT 207
+ C++C + GH +++C Q+ G GG C CG V HLA+DC +G +
Sbjct: 126 SGGEGECYMCGDVGHFARDCRQSGGGNSGGGGGGGRPCYSCGEVGHLAKDC-----RGGS 180
Query: 208 ASSKQAMAGGERPTG 222
++ GG R +G
Sbjct: 181 GGNRYG-GGGGRGSG 194
Score = 113 (44.8 bits), Expect = 0.00031, P = 0.00031
Identities = 37/132 (28%), Positives = 51/132 (38%)
Query: 77 GESCFICKAKEHIAKHCPMKAEWEKN------KICLVCRRRGHTLKNCPSKNDETESTKL 130
GE C++C H A+ C + C C GH K+C +
Sbjct: 130 GE-CYMCGDVGHFARDCRQSGGGNSGGGGGGGRPCYSCGEVGHLAKDCRGGSGGNR---- 184
Query: 131 CYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGC-CKICG 189
Y G G GG C++C GH +++C QN G GG C CG
Sbjct: 185 -YG-GGGGRG---------SGGD---GCYMCGGVGHFARDCRQNGGGNVGGGGSTCYTCG 230
Query: 190 GVTHLARDCPNK 201
GV H+A+ C +K
Sbjct: 231 GVGHIAKVCTSK 242
>TAIR|locus:2057295 [details] [associations]
symbol:AT2G12880 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:AC006437
EMBL:AC007155 IPI:IPI00547403 PIR:C84504 RefSeq:NP_178944.1
UniGene:At.52721 ProteinModelPortal:Q9SKG2 SMR:Q9SKG2 PRIDE:Q9SKG2
EnsemblPlants:AT2G12880.1 GeneID:815767 KEGG:ath:AT2G12880
TAIR:At2g12880 eggNOG:KOG4400 InParanoid:Q9SKG2 PhylomeDB:Q9SKG2
ArrayExpress:Q9SKG2 Genevestigator:Q9SKG2 Uniprot:Q9SKG2
Length = 119
Score = 125 (49.1 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 24/66 (36%), Positives = 32/66 (48%)
Query: 129 KLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCP-QNAHGIYPKGGCCKI 187
+ CY CG+ GH C Q T + +C+ C E+GH S CP + + PKG C
Sbjct: 34 RACYKCGKLGHFARSCHVVTQPT-TAYITCYFCSEEGHRSNGCPNKRTDQVNPKGHCYW- 91
Query: 188 CGGVTH 193
CG H
Sbjct: 92 CGNQDH 97
Score = 95 (38.5 bits), Expect = 0.00022, P = 0.00022
Identities = 18/64 (28%), Positives = 25/64 (39%)
Query: 103 KICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICK 162
+ C C + GH ++C T + CY C + GH CP D C+ C
Sbjct: 34 RACYKCGKLGHFARSCHVVTQPTTAYITCYFCSEEGHRSNGCPNKRTDQVNPKGHCYWCG 93
Query: 163 EQGH 166
Q H
Sbjct: 94 NQDH 97
Score = 93 (37.8 bits), Expect = 0.00036, P = 0.00036
Identities = 23/86 (26%), Positives = 33/86 (38%)
Query: 56 NEKSMKRVFTRHPLRVPGMKPGESCFICKAKEHIAKHCPMKAEWEKNKI-CLVCRRRGHT 114
N++ R + R P +C+ C H A+ C + + I C C GH
Sbjct: 13 NDRERTRASYNNDRRRNDYDP-RACYKCGKLGHFARSCHVVTQPTTAYITCYFCSEEGHR 71
Query: 115 LKNCPSKN-DETESTKLCYNCGQAGH 139
CP+K D+ CY CG H
Sbjct: 72 SNGCPNKRTDQVNPKGHCYWCGNQDH 97
>TAIR|locus:2183607 [details] [associations]
symbol:AT5G36240 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:AB026661
IPI:IPI00533303 RefSeq:NP_198473.1 UniGene:At.55159
ProteinModelPortal:Q9FG62 SMR:Q9FG62 PaxDb:Q9FG62 PRIDE:Q9FG62
EnsemblPlants:AT5G36240.1 GeneID:833621 KEGG:ath:AT5G36240
TAIR:At5g36240 eggNOG:NOG310171 HOGENOM:HOG000152454
InParanoid:Q9FG62 OMA:EGHFEHQ PhylomeDB:Q9FG62
ProtClustDB:CLSN2916402 Genevestigator:Q9FG62 Uniprot:Q9FG62
Length = 254
Score = 140 (54.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 40/128 (31%), Positives = 52/128 (40%)
Query: 68 PLRVPGMKPGES--CFICKAKEHIAKHCPMKAEWE--KNKICLVCRRRGHTLKNCPSKND 123
PL +P E+ C C H C + E KN C VC GH C +
Sbjct: 14 PLIMPRHNDDEAEVCLRCGGFGHDMTLCKYEYSHEDLKNIKCYVCNSLGHL---CCIEPG 70
Query: 124 ETES-TKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKG 182
T+S T CY CGQ GH+ C + D + SCFIC +GH C + +P+
Sbjct: 71 HTQSWTVSCYRCGQLGHTGLACGRHYDDSVSP--SCFICGREGHFEHQCHNSFSVCFPED 128
Query: 183 GCCKICGG 190
C G
Sbjct: 129 SSEDECQG 136
>WB|WBGene00001599 [details] [associations]
symbol:glh-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0016070 "RNA metabolic process"
evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0008432 "JUN kinase
binding" evidence=IPI] [GO:0043621 "protein self-association"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
Uniprot:Q966L9
Length = 974
Score = 141 (54.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 54/198 (27%), Positives = 83/198 (41%)
Query: 73 GMKPGE---SCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTK 129
G GE +CF C+ H + CP + + ++C C++ GH ++CP + E
Sbjct: 363 GQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRN 422
Query: 130 LCY------NCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGG 183
N G G A+ ++ G CF CK +GH S CP+ P G
Sbjct: 423 GFTSGFGGGNDGGFGGGNAEGFGNNEERGPM--KCFNCKGEGHRSAECPE------PPRG 474
Query: 184 CCKICGGVTHLARDCPNKGIQGFTASSKQAMAGGERPTGQVTKFTSGDDLLDDFLTEDAN 243
C CG H + +CPN A ++ A GE P + T D++ + F + +
Sbjct: 475 CFN-CGEQGHRSNECPNP------AKPREG-AEGEGP--KATYVPVEDNMEEVFNMQKIS 524
Query: 244 IGNK-DKSSIAKVDSTSD 260
G +K A+V TSD
Sbjct: 525 EGLMFNKFFDAEVKITSD 542
>UNIPROTKB|Q966L9 [details] [associations]
symbol:glh-2 "ATP-dependent RNA helicase glh-2"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
Uniprot:Q966L9
Length = 974
Score = 141 (54.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 54/198 (27%), Positives = 83/198 (41%)
Query: 73 GMKPGE---SCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTK 129
G GE +CF C+ H + CP + + ++C C++ GH ++CP + E
Sbjct: 363 GQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRN 422
Query: 130 LCY------NCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGG 183
N G G A+ ++ G CF CK +GH S CP+ P G
Sbjct: 423 GFTSGFGGGNDGGFGGGNAEGFGNNEERGPM--KCFNCKGEGHRSAECPE------PPRG 474
Query: 184 CCKICGGVTHLARDCPNKGIQGFTASSKQAMAGGERPTGQVTKFTSGDDLLDDFLTEDAN 243
C CG H + +CPN A ++ A GE P + T D++ + F + +
Sbjct: 475 CFN-CGEQGHRSNECPNP------AKPREG-AEGEGP--KATYVPVEDNMEEVFNMQKIS 524
Query: 244 IGNK-DKSSIAKVDSTSD 260
G +K A+V TSD
Sbjct: 525 EGLMFNKFFDAEVKITSD 542
>WB|WBGene00001601 [details] [associations]
symbol:glh-4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0007276 "gamete generation"
evidence=IMP] [GO:0043186 "P granule" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0008432 "JUN kinase binding" evidence=IPI]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 GO:GO:0042127 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0007276
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:AF079508 EMBL:FO081191 PIR:T32759 PIR:T43326
RefSeq:NP_491207.3 ProteinModelPortal:O76743 SMR:O76743
IntAct:O76743 STRING:O76743 PaxDb:O76743 PRIDE:O76743
EnsemblMetazoa:T12F5.3.1 EnsemblMetazoa:T12F5.3.2 GeneID:171941
KEGG:cel:CELE_T12F5.3 UCSC:T12F5.3.1 CTD:171941 WormBase:T12F5.3
InParanoid:O76743 NextBio:873335 Uniprot:O76743
Length = 1156
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 48/162 (29%), Positives = 68/162 (41%)
Query: 100 EKNKICLVCRRRGHTLKNCPSKNDETESTKL-CYNCGQAGHSLAQCPQPLQDGGTKFASC 158
E+ + C C GH K C D+ + + C NC Q GH + C QP G C
Sbjct: 567 ERPRGCHNCGEEGHISKEC----DKPKVPRFPCRNCEQLGHFASDCDQPRVPRGP----C 618
Query: 159 FICKEQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDCPNKGIQGF-TASSKQAMAGG 217
C +GH + +C Q P+G C + CG H A+DC N+ ++ T ++ G
Sbjct: 619 RNCGIEGHFAVDCDQPK---VPRGPC-RNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEG 674
Query: 218 E-------RPTGQVTKFTSGDDLL---DDFLTEDANIGNKDK 249
RP F D + DD + EDA + N DK
Sbjct: 675 HWGYECPTRPKDLQGNFLESYDFVFTPDDKMFEDA-VNNDDK 715
Score = 139 (54.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 40/136 (29%), Positives = 57/136 (41%)
Query: 73 GMKPGESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTK-LC 131
G +P C C + HI+K C K + + C C + GH +C D+ + C
Sbjct: 566 GERP-RGCHNCGEEGHISKECD-KPKVPRFP-CRNCEQLGHFASDC----DQPRVPRGPC 618
Query: 132 YNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYPKGGCCKICGGV 191
NCG GH C QP G C C ++GH +K+C + P C + C
Sbjct: 619 RNCGIEGHFAVDCDQPKVPRGP----CRNCGQEGHFAKDCQNERVRMEPTEPCRR-CAEE 673
Query: 192 THLARDCPN--KGIQG 205
H +CP K +QG
Sbjct: 674 GHWGYECPTRPKDLQG 689
>WB|WBGene00001598 [details] [associations]
symbol:glh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0016070 "RNA metabolic process"
evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008432 "JUN kinase binding" evidence=IPI]
[GO:0043621 "protein self-association" evidence=IPI] [GO:0017151
"DEAD/H-box RNA helicase binding" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 GO:GO:0006915 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 GO:GO:0009791 GO:GO:0007281 Gene3D:4.10.60.10
SUPFAM:SSF57756 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772 EMBL:FO080897
PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 138 (53.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 40/145 (27%), Positives = 60/145 (41%)
Query: 73 GMKPGESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCY 132
G + +CF C+ H + CP + + ++C C++ GHT + C + E +
Sbjct: 153 GGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 133 NCGQAGHSLAQCPQPLQ-DGGTKFAS------CFICKEQGHLSKNCPQNAHGIYPKGGCC 185
G AG DGG CF CK +GH S CP+ P GC
Sbjct: 213 G-GGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPE------PPRGCF 265
Query: 186 KICGGVTHLARDCPN-----KGIQG 205
CG H + +CPN +G++G
Sbjct: 266 N-CGEQGHRSNECPNPAKPREGVEG 289
>UNIPROTKB|P34689 [details] [associations]
symbol:glh-1 "ATP-dependent RNA helicase glh-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772
EMBL:FO080897 PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 138 (53.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 40/145 (27%), Positives = 60/145 (41%)
Query: 73 GMKPGESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCY 132
G + +CF C+ H + CP + + ++C C++ GHT + C + E +
Sbjct: 153 GGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 133 NCGQAGHSLAQCPQPLQ-DGGTKFAS------CFICKEQGHLSKNCPQNAHGIYPKGGCC 185
G AG DGG CF CK +GH S CP+ P GC
Sbjct: 213 G-GGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPE------PPRGCF 265
Query: 186 KICGGVTHLARDCPN-----KGIQG 205
CG H + +CPN +G++G
Sbjct: 266 N-CGEQGHRSNECPNPAKPREGVEG 289
>POMBASE|SPBP35G2.08c [details] [associations]
symbol:air1 "zinc knuckle TRAMP complex subunit Air1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016075 "rRNA catabolic
process" evidence=ISO] [GO:0016076 "snRNA catabolic process"
evidence=ISO] [GO:0016077 "snoRNA catabolic process" evidence=ISO]
[GO:0016078 "tRNA catabolic process" evidence=ISO] [GO:0031499
"TRAMP complex" evidence=IDA] [GO:0043630 "ncRNA polyadenylation
involved in polyadenylation-dependent ncRNA catabolic process"
evidence=ISO] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 PomBase:SPBP35G2.08c GO:GO:0005730 GO:GO:0046872
EMBL:CU329671 GO:GO:0008270 GenomeReviews:CU329671_GR GO:GO:0003676
RefSeq:NP_595383.2 HSSP:Q9H9Z2 STRING:Q9P795
EnsemblFungi:SPBP35G2.08c.1 GeneID:2541349 eggNOG:COG5082
OrthoDB:EOG4F21BK NextBio:20802458 GO:GO:0031499 GO:GO:0043630
GO:GO:0016075 GO:GO:0016077 GO:GO:0016076 GO:GO:0016078
Gene3D:4.10.60.10 InterPro:IPR016713 PIRSF:PIRSF018162
SUPFAM:SSF57756 Uniprot:Q9P795
Length = 315
Score = 125 (49.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 35/103 (33%), Positives = 41/103 (39%)
Query: 73 GMKPGES--CFICKAKEHIAKHCPMKAEWEKNKICLVCRR-RGHTLKNCPSKNDETESTK 129
G P ES C CK HI+K CP + +C C H CP TK
Sbjct: 82 GSDPSESIVCHNCKGNGHISKDCP-------HVLCTTCGAIDDHISVRCPW-------TK 127
Query: 130 LCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCP 172
C NCG GH A+C +P + G C C H S CP
Sbjct: 128 KCMNCGLLGHIAARCSEPRKRGPRV---CRTCHTDTHTSSTCP 167
>UNIPROTKB|G4MQ81 [details] [associations]
symbol:MGG_09256 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 GO:GO:0008270
GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756 KO:K12597
EMBL:CM001231 RefSeq:XP_003709886.1 ProteinModelPortal:G4MQ81
EnsemblFungi:MGG_09256T0 GeneID:2680192 KEGG:mgr:MGG_09256
Uniprot:G4MQ81
Length = 695
Score = 127 (49.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 27/99 (27%), Positives = 42/99 (42%)
Query: 101 KNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFI 160
K C++C + GH +CP C +C H+ AQCP+ ++ C
Sbjct: 397 KTDFCVICAKNGHRANDCPPPT--------CRHCQNQDHTSAQCPKRVR--------CTK 440
Query: 161 CKEQGHLSKNCPQNAHGIYPKGGC-CKICGGVTHLARDC 198
C+ GH+ K+CP+ + C +C HL DC
Sbjct: 441 CQHLGHIKKSCPEKLASAAGEAELECAVCCATDHLEDDC 479
>TAIR|locus:2149234 [details] [associations]
symbol:AT5G20220 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031072 "heat shock protein binding"
evidence=IEA] [GO:0051082 "unfolded protein binding" evidence=IEA]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 EMBL:CP002688
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
IPI:IPI00540792 RefSeq:NP_001078608.1 RefSeq:NP_568393.1
UniGene:At.31217 ProteinModelPortal:F4K466 SMR:F4K466
EnsemblPlants:AT5G20220.1 EnsemblPlants:AT5G20220.2 GeneID:832144
KEGG:ath:AT5G20220 OMA:SIDERPW Uniprot:F4K466
Length = 393
Score = 121 (47.7 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 34/117 (29%), Positives = 48/117 (41%)
Query: 105 CLVCRRRGHTLKNCPSKNDETESTKLCYNCGQAGHSLAQCPQP---LQDG-GTKFASCFI 160
C C + GH CP + C CG GH+ CP+ + G T++ C I
Sbjct: 266 CKNCGQEGHRRHYCPELGTNADRKFRCRGCGGKGHNRRTCPKSKSIVTKGISTRYHKCGI 325
Query: 161 CKEQGHLSKNCPQNAHGIYPK-----GGCCKICGGVTHLARDCPNKGIQGFTASSKQ 212
C E+GH S+ C + G+ P G + G +T+ C G T SKQ
Sbjct: 326 CGERGHNSRTC-RKPTGVNPSCSGENSGEDGV-GKITYACGFCKKMGHNVRTCPSKQ 380
>WB|WBGene00043995 [details] [associations]
symbol:F40F12.9 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:Z30215
GeneTree:ENSGT00390000010943 RefSeq:NP_001255048.1
ProteinModelPortal:D5MCP3 SMR:D5MCP3 EnsemblMetazoa:F40F12.9a.1
EnsemblMetazoa:F40F12.9a.2 GeneID:259311 KEGG:cel:CELE_F40F12.9
CTD:259311 WormBase:F40F12.9a Uniprot:D5MCP3
Length = 113
Score = 96 (38.9 bits), Expect = 0.00017, P = 0.00017
Identities = 21/74 (28%), Positives = 31/74 (41%)
Query: 76 PGESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPSKNDETESTKLCYNCG 135
P +C CK +E + IC C + GH ++CP E K C+ CG
Sbjct: 2 PHNNC--CKFQEPTDSSETSSMHNLEQSICYNCHKLGHMSRDCPE-----EQPKACFKCG 54
Query: 136 QAGHSLAQCPQPLQ 149
GH +CP ++
Sbjct: 55 FRGHYYRECPSQIE 68
>POMBASE|SPCC962.06c [details] [associations]
symbol:bpb1 "zinc finger splicing factor Bpb1"
species:4896 "Schizosaccharomyces pombe" [GO:0000243 "commitment
complex" evidence=IDA] [GO:0000349 "generation of catalytic
spliceosome for first transesterification step" evidence=IDA]
[GO:0003723 "RNA binding" evidence=ISM] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001878 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 Pfam:PF00098 PROSITE:PS50084
PROSITE:PS50158 SMART:SM00322 SMART:SM00343 PomBase:SPCC962.06c
GO:GO:0005829 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 eggNOG:COG5082 Gene3D:4.10.60.10
SUPFAM:SSF57756 HSSP:Q9BW01 KO:K13095 GO:GO:0000243 EMBL:AF073779
PIR:T41653 RefSeq:NP_587871.1 ProteinModelPortal:O74555 SMR:O74555
STRING:O74555 EnsemblFungi:SPCC962.06c.1 GeneID:2538832
KEGG:spo:SPCC962.06c HOGENOM:HOG000197271 OMA:RIEEISH
OrthoDB:EOG4HQHTF NextBio:20800014 GO:GO:0000349 Uniprot:O74555
Length = 587
Score = 89 (36.4 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 126 ESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCP 172
+ ++C NCG GH CP+ + T C C GH++++CP
Sbjct: 306 DENQVCQNCGNVGHRRFDCPERINH--TMNIVCRHCGSIGHIARDCP 350
Score = 68 (29.0 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 22/67 (32%), Positives = 33/67 (49%)
Query: 57 EKSMKRVFTRHPLRVPGMK-PGESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTL 115
E R+ R VPG + P + K +E + + P+K E N I L+ RGHTL
Sbjct: 157 EDERHRIIERAMKMVPGFRAPSDYRRPAKTQEKV--YVPVKDYPEINFIGLLIGPRGHTL 214
Query: 116 KNCPSKN 122
K+ +K+
Sbjct: 215 KDMEAKS 221
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.424 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 281 243 0.00097 113 3 11 22 0.45 33
32 0.45 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 58
No. of states in DFA: 612 (65 KB)
Total size of DFA: 208 KB (2114 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.54u 0.21s 22.75t Elapsed: 00:00:02
Total cpu time: 22.55u 0.21s 22.76t Elapsed: 00:00:02
Start: Fri May 10 04:37:01 2013 End: Fri May 10 04:37:03 2013