Query 023491
Match_columns 281
No_of_seqs 225 out of 2869
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 07:43:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023491.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023491hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gco_A Protein STI-1; structur 99.9 6.4E-22 2.2E-26 157.4 15.2 117 3-122 9-125 (126)
2 3upv_A Heat shock protein STI1 99.8 6.4E-19 2.2E-23 137.4 16.0 119 4-125 1-125 (126)
3 3rkv_A Putative peptidylprolyl 99.8 9.8E-19 3.4E-23 142.6 16.2 123 6-128 10-148 (162)
4 3gyz_A Chaperone protein IPGC; 99.8 1.9E-18 6.4E-23 142.5 15.4 108 3-113 32-139 (151)
5 4gcn_A Protein STI-1; structur 99.8 9.3E-18 3.2E-22 133.0 15.3 112 5-120 6-124 (127)
6 2hr2_A Hypothetical protein; a 99.8 1.4E-18 4.8E-23 145.2 10.6 118 6-126 10-150 (159)
7 2vgx_A Chaperone SYCD; alterna 99.8 7.6E-18 2.6E-22 137.1 14.5 123 3-128 17-139 (148)
8 2xcb_A PCRH, regulatory protei 99.8 7.7E-18 2.6E-22 134.9 13.8 121 3-126 14-134 (142)
9 4ga2_A E3 SUMO-protein ligase 99.8 5.8E-18 2E-22 137.8 13.0 119 4-125 28-147 (150)
10 3sz7_A HSC70 cochaperone (SGT) 99.8 1.5E-17 5.3E-22 135.7 15.5 120 3-125 7-128 (164)
11 3q49_B STIP1 homology and U bo 99.7 7.9E-17 2.7E-21 126.1 16.0 120 3-125 5-129 (137)
12 2dba_A Smooth muscle cell asso 99.7 7.6E-16 2.6E-20 121.0 17.0 118 3-123 24-144 (148)
13 3urz_A Uncharacterized protein 99.7 5.8E-16 2E-20 132.0 17.5 118 5-125 2-135 (208)
14 2lni_A Stress-induced-phosphop 99.7 4.5E-16 1.6E-20 119.9 15.0 120 3-125 12-131 (133)
15 2vyi_A SGTA protein; chaperone 99.7 1.5E-15 5.2E-20 115.8 17.2 121 4-127 9-129 (131)
16 1p5q_A FKBP52, FK506-binding p 99.7 4.1E-16 1.4E-20 143.3 16.6 122 4-128 144-280 (336)
17 1elw_A TPR1-domain of HOP; HOP 99.7 1.6E-15 5.6E-20 113.8 16.8 115 6-123 3-117 (118)
18 2fbn_A 70 kDa peptidylprolyl i 99.7 1.2E-15 4E-20 128.2 17.4 120 6-128 37-172 (198)
19 4gyw_A UDP-N-acetylglucosamine 99.7 5.1E-16 1.8E-20 157.4 17.6 124 3-129 39-162 (723)
20 2pl2_A Hypothetical conserved 99.7 7.8E-16 2.7E-20 132.1 15.9 119 4-125 2-131 (217)
21 1kt0_A FKBP51, 51 kDa FK506-bi 99.7 3.2E-16 1.1E-20 150.1 14.3 121 4-127 265-400 (457)
22 2xev_A YBGF; tetratricopeptide 99.7 2.3E-15 7.7E-20 116.5 15.8 116 8-126 3-124 (129)
23 4i17_A Hypothetical protein; T 99.7 4E-15 1.4E-19 126.8 17.9 120 2-124 2-129 (228)
24 4gyw_A UDP-N-acetylglucosamine 99.7 2.3E-15 7.9E-20 152.6 19.3 122 2-126 4-125 (723)
25 2h6f_A Protein farnesyltransfe 99.7 1E-15 3.4E-20 144.1 15.1 121 3-126 127-248 (382)
26 1hxi_A PEX5, peroxisome target 99.7 9.6E-16 3.3E-20 120.4 12.5 103 8-113 18-120 (121)
27 1elr_A TPR2A-domain of HOP; HO 99.7 3.5E-15 1.2E-19 114.0 15.3 120 5-128 2-128 (131)
28 2pl2_A Hypothetical conserved 99.7 3.7E-15 1.3E-19 127.8 17.1 122 2-127 34-166 (217)
29 4ga2_A E3 SUMO-protein ligase 99.7 3.1E-16 1.1E-20 127.5 9.5 114 13-129 3-116 (150)
30 1na0_A Designed protein CTPR3; 99.7 1.5E-14 5.3E-19 109.3 18.4 120 3-125 4-124 (125)
31 1a17_A Serine/threonine protei 99.6 1.3E-14 4.5E-19 116.0 18.3 117 6-125 12-128 (166)
32 1ihg_A Cyclophilin 40; ppiase 99.6 3.2E-15 1.1E-19 139.8 16.8 121 7-127 223-356 (370)
33 2h6f_A Protein farnesyltransfe 99.6 2.3E-15 7.8E-20 141.7 14.9 124 3-129 93-217 (382)
34 3vtx_A MAMA; tetratricopeptide 99.6 3.2E-14 1.1E-18 117.0 18.9 119 6-127 4-156 (184)
35 2e2e_A Formate-dependent nitri 99.6 1.5E-14 5.1E-19 118.7 15.9 120 3-125 40-162 (177)
36 3vtx_A MAMA; tetratricopeptide 99.6 4.1E-14 1.4E-18 116.4 18.4 85 42-126 3-87 (184)
37 2kck_A TPR repeat; tetratricop 99.6 3.7E-15 1.3E-19 111.1 10.9 106 3-111 2-110 (112)
38 4i17_A Hypothetical protein; T 99.6 1.9E-14 6.3E-19 122.7 16.0 119 5-126 40-167 (228)
39 2c2l_A CHIP, carboxy terminus 99.6 1E-14 3.4E-19 130.5 14.8 105 4-111 1-105 (281)
40 3urz_A Uncharacterized protein 99.6 1.3E-14 4.4E-19 123.6 14.5 118 3-124 34-202 (208)
41 2if4_A ATFKBP42; FKBP-like, al 99.6 1.6E-15 5.4E-20 139.6 8.6 118 6-126 178-312 (338)
42 1zu2_A Mitochondrial import re 99.6 8.8E-15 3E-19 122.0 10.1 106 17-125 12-138 (158)
43 3k9i_A BH0479 protein; putativ 99.6 1.8E-14 6.1E-19 111.4 10.6 108 19-126 2-109 (117)
44 3uq3_A Heat shock protein STI1 99.5 7.6E-14 2.6E-18 118.7 14.5 116 3-121 135-256 (258)
45 3as5_A MAMA; tetratricopeptide 99.5 5.4E-13 1.9E-17 107.3 18.7 121 3-126 38-158 (186)
46 1hh8_A P67PHOX, NCF-2, neutrop 99.5 1.9E-13 6.7E-18 114.4 15.8 103 6-111 36-154 (213)
47 3qky_A Outer membrane assembly 99.5 1.5E-13 5.3E-18 119.7 15.5 110 3-115 11-134 (261)
48 1xnf_A Lipoprotein NLPI; TPR, 99.5 2.7E-13 9.4E-18 116.8 16.2 114 4-120 40-153 (275)
49 2q7f_A YRRB protein; TPR, prot 99.5 1.1E-12 3.8E-17 110.9 19.0 122 3-127 53-174 (243)
50 2fo7_A Synthetic consensus TPR 99.5 8.4E-13 2.9E-17 100.3 16.2 114 8-124 2-115 (136)
51 3qky_A Outer membrane assembly 99.5 3.2E-13 1.1E-17 117.7 15.6 124 3-126 45-199 (261)
52 2vsy_A XCC0866; transferase, g 99.5 4.6E-13 1.6E-17 130.2 18.2 120 3-125 19-138 (568)
53 2q7f_A YRRB protein; TPR, prot 99.5 1.3E-12 4.5E-17 110.5 18.3 123 3-128 87-209 (243)
54 1fch_A Peroxisomal targeting s 99.5 6.3E-13 2.1E-17 119.6 17.2 123 3-128 211-346 (368)
55 3gyz_A Chaperone protein IPGC; 99.5 3.6E-14 1.2E-18 116.7 8.0 100 26-128 21-120 (151)
56 2pzi_A Probable serine/threoni 99.5 1.1E-13 3.7E-18 138.8 12.9 120 3-126 429-548 (681)
57 4gco_A Protein STI-1; structur 99.5 2.9E-13 9.8E-18 107.0 12.6 89 40-128 9-97 (126)
58 4eqf_A PEX5-related protein; a 99.5 4.7E-13 1.6E-17 121.2 15.6 121 3-126 207-341 (365)
59 3uq3_A Heat shock protein STI1 99.5 1.5E-12 5E-17 110.7 17.6 121 7-127 79-222 (258)
60 2yhc_A BAMD, UPF0169 lipoprote 99.5 4.4E-13 1.5E-17 115.1 14.0 114 5-118 2-136 (225)
61 1hh8_A P67PHOX, NCF-2, neutrop 99.5 1E-12 3.5E-17 110.0 15.8 114 7-126 6-135 (213)
62 1wao_1 Serine/threonine protei 99.5 4.2E-14 1.4E-18 136.3 7.9 117 5-124 4-120 (477)
63 2fo7_A Synthetic consensus TPR 99.5 1.8E-12 6.2E-17 98.4 15.2 106 3-111 31-136 (136)
64 4eqf_A PEX5-related protein; a 99.5 2.3E-12 7.8E-17 116.7 18.3 126 3-128 129-297 (365)
65 2vq2_A PILW, putative fimbrial 99.5 1.6E-12 5.6E-17 108.1 16.0 118 3-123 4-124 (225)
66 2pzi_A Probable serine/threoni 99.5 8.7E-14 3E-18 139.5 9.6 116 3-122 463-578 (681)
67 3cv0_A Peroxisome targeting si 99.5 2.2E-12 7.6E-17 113.4 17.6 122 3-127 168-301 (327)
68 2ho1_A Type 4 fimbrial biogene 99.5 2.4E-12 8.3E-17 110.1 17.3 120 3-125 67-188 (252)
69 1w3b_A UDP-N-acetylglucosamine 99.5 8.4E-13 2.9E-17 120.7 15.3 121 3-126 233-353 (388)
70 2vq2_A PILW, putative fimbrial 99.5 3E-12 1E-16 106.5 17.3 118 4-124 39-159 (225)
71 1w3b_A UDP-N-acetylglucosamine 99.5 9.5E-13 3.3E-17 120.3 15.5 116 3-121 63-178 (388)
72 3hym_B Cell division cycle pro 99.5 7.2E-13 2.4E-17 116.7 14.0 120 3-122 189-314 (330)
73 3u4t_A TPR repeat-containing p 99.5 4.3E-13 1.5E-17 115.9 12.2 117 3-119 33-149 (272)
74 3qou_A Protein YBBN; thioredox 99.5 1.5E-12 5.1E-17 116.6 16.1 122 4-128 114-271 (287)
75 4abn_A Tetratricopeptide repea 99.5 4.9E-13 1.7E-17 128.3 13.7 117 7-126 170-306 (474)
76 4abn_A Tetratricopeptide repea 99.5 5.5E-13 1.9E-17 127.9 14.0 99 3-104 209-318 (474)
77 3as5_A MAMA; tetratricopeptide 99.5 2E-12 6.8E-17 103.9 15.1 118 6-126 7-124 (186)
78 2ho1_A Type 4 fimbrial biogene 99.5 3.3E-12 1.1E-16 109.3 17.3 121 3-126 101-223 (252)
79 3ieg_A DNAJ homolog subfamily 99.5 1.4E-12 4.8E-17 115.7 15.4 112 6-120 2-116 (359)
80 2l6j_A TPR repeat-containing p 99.4 6.2E-14 2.1E-18 105.3 5.4 95 6-103 3-103 (111)
81 3ieg_A DNAJ homolog subfamily 99.4 3.5E-12 1.2E-16 113.1 17.7 115 10-127 237-355 (359)
82 2y4t_A DNAJ homolog subfamily 99.4 1.7E-12 5.7E-17 120.2 16.2 116 2-120 21-139 (450)
83 3hym_B Cell division cycle pro 99.4 2.4E-12 8.3E-17 113.3 16.1 121 3-126 86-207 (330)
84 2r5s_A Uncharacterized protein 99.4 1.4E-12 4.7E-17 107.6 12.8 123 3-128 2-160 (176)
85 3u4t_A TPR repeat-containing p 99.4 3.1E-12 1.1E-16 110.4 15.1 118 7-127 74-191 (272)
86 2vgx_A Chaperone SYCD; alterna 99.4 7E-13 2.4E-17 107.5 10.2 100 26-128 6-105 (148)
87 2yhc_A BAMD, UPF0169 lipoprote 99.4 4.7E-12 1.6E-16 108.6 14.9 122 5-126 39-198 (225)
88 1fch_A Peroxisomal targeting s 99.4 1.7E-11 5.7E-16 110.2 19.0 125 3-127 128-300 (368)
89 2kat_A Uncharacterized protein 99.4 5.4E-12 1.9E-16 96.5 13.3 95 25-122 3-99 (115)
90 2y4t_A DNAJ homolog subfamily 99.4 9.7E-12 3.3E-16 115.0 17.3 113 11-126 261-377 (450)
91 3mkr_A Coatomer subunit epsilo 99.4 1.6E-11 5.4E-16 110.4 17.5 121 4-127 127-249 (291)
92 2xcb_A PCRH, regulatory protei 99.4 3.6E-12 1.2E-16 101.6 10.7 98 28-128 5-102 (142)
93 2e2e_A Formate-dependent nitri 99.4 3.1E-12 1.1E-16 104.7 10.5 110 14-126 17-129 (177)
94 3mkr_A Coatomer subunit epsilo 99.4 2E-11 7E-16 109.7 16.6 115 4-121 161-278 (291)
95 2gw1_A Mitochondrial precursor 99.4 1.1E-11 3.7E-16 116.1 15.3 103 6-112 5-107 (514)
96 3edt_B KLC 2, kinesin light ch 99.4 4E-12 1.4E-16 109.0 11.4 124 4-127 40-184 (283)
97 1na3_A Designed protein CTPR2; 99.4 1E-11 3.5E-16 89.8 11.9 81 43-123 8-88 (91)
98 1xnf_A Lipoprotein NLPI; TPR, 99.4 2.3E-11 8E-16 104.6 16.1 108 3-113 73-250 (275)
99 2xpi_A Anaphase-promoting comp 99.3 2.6E-11 8.8E-16 116.5 17.8 119 3-121 471-593 (597)
100 1a17_A Serine/threonine protei 99.3 2.2E-11 7.4E-16 97.1 14.3 102 3-107 43-146 (166)
101 2vsy_A XCC0866; transferase, g 99.3 1.7E-11 5.7E-16 119.2 15.3 108 3-113 53-163 (568)
102 4g1t_A Interferon-induced prot 99.3 4.3E-11 1.5E-15 111.8 17.6 124 5-128 49-188 (472)
103 3upv_A Heat shock protein STI1 99.3 2.4E-11 8.1E-16 94.0 13.0 87 42-128 2-88 (126)
104 3fp2_A TPR repeat-containing p 99.3 2.2E-11 7.5E-16 115.0 14.8 119 4-126 274-392 (537)
105 3cv0_A Peroxisome targeting si 99.3 1.4E-11 4.8E-16 108.2 12.3 111 5-118 19-129 (327)
106 1na3_A Designed protein CTPR2; 99.3 4.4E-11 1.5E-15 86.4 12.9 87 3-92 5-91 (91)
107 1qqe_A Vesicular transport pro 99.3 3E-11 1E-15 107.8 14.3 107 7-113 77-193 (292)
108 2l6j_A TPR repeat-containing p 99.3 4E-11 1.4E-15 89.7 12.7 87 43-129 3-95 (111)
109 4gcn_A Protein STI-1; structur 99.3 6.5E-12 2.2E-16 99.0 8.6 71 42-112 6-76 (127)
110 2gw1_A Mitochondrial precursor 99.3 3.5E-11 1.2E-15 112.5 13.9 118 3-123 368-494 (514)
111 1p5q_A FKBP52, FK506-binding p 99.3 4.6E-11 1.6E-15 109.5 14.3 97 7-106 196-293 (336)
112 2xpi_A Anaphase-promoting comp 99.3 1.2E-10 4.1E-15 111.8 17.7 121 3-126 369-489 (597)
113 2kc7_A BFR218_protein; tetratr 99.3 9E-12 3.1E-16 92.4 7.7 90 11-111 4-94 (99)
114 3sz7_A HSC70 cochaperone (SGT) 99.3 8.1E-11 2.8E-15 95.5 13.2 88 40-127 7-94 (164)
115 3ma5_A Tetratricopeptide repea 99.2 5.6E-11 1.9E-15 89.6 11.0 71 40-110 3-73 (100)
116 1qqe_A Vesicular transport pro 99.2 4.2E-11 1.4E-15 106.9 12.0 109 7-115 117-236 (292)
117 3edt_B KLC 2, kinesin light ch 99.2 4E-11 1.4E-15 102.7 11.1 104 4-107 82-198 (283)
118 2ond_A Cleavage stimulation fa 99.2 1.3E-10 4.6E-15 104.1 14.8 119 3-124 95-215 (308)
119 3fp2_A TPR repeat-containing p 99.2 1.2E-10 4E-15 110.0 14.8 116 7-126 243-358 (537)
120 1ouv_A Conserved hypothetical 99.2 4.7E-10 1.6E-14 97.7 17.4 114 2-124 1-122 (273)
121 1hxi_A PEX5, peroxisome target 99.2 1.5E-10 5E-15 90.5 12.7 83 45-127 18-100 (121)
122 3q49_B STIP1 homology and U bo 99.2 2.3E-10 7.8E-15 88.9 13.5 88 40-127 5-92 (137)
123 2vyi_A SGTA protein; chaperone 99.2 2.2E-10 7.5E-15 86.8 12.9 89 3-94 42-130 (131)
124 3ro3_A PINS homolog, G-protein 99.2 2.9E-10 9.8E-15 88.8 13.4 103 7-109 9-120 (164)
125 3ma5_A Tetratricopeptide repea 99.2 1.2E-10 4.2E-15 87.7 10.7 90 1-93 1-92 (100)
126 3nf1_A KLC 1, kinesin light ch 99.2 8.2E-11 2.8E-15 102.6 11.0 125 3-127 65-210 (311)
127 2ond_A Cleavage stimulation fa 99.2 2.1E-10 7.3E-15 102.8 13.7 116 3-121 46-177 (308)
128 3nf1_A KLC 1, kinesin light ch 99.2 1E-10 3.5E-15 102.0 11.1 123 2-124 22-165 (311)
129 2lni_A Stress-induced-phosphop 99.2 1.9E-10 6.4E-15 88.0 10.8 88 3-93 46-133 (133)
130 3u3w_A Transcriptional activat 99.2 1.7E-10 5.7E-15 102.6 11.9 102 7-108 155-267 (293)
131 4g1t_A Interferon-induced prot 99.2 4.7E-10 1.6E-14 104.6 15.4 123 3-125 90-222 (472)
132 3ulq_A Response regulator aspa 99.2 4.4E-10 1.5E-14 103.0 14.7 121 6-126 142-278 (383)
133 4a1s_A PINS, partner of inscut 99.2 1.5E-10 5.2E-15 105.9 11.5 121 4-127 45-181 (411)
134 2hr2_A Hypothetical protein; a 99.2 2.9E-10 9.8E-15 94.7 12.0 86 43-128 10-118 (159)
135 1wao_1 Serine/threonine protei 99.2 3.1E-11 1.1E-15 116.3 7.0 105 3-110 36-153 (477)
136 1dce_A Protein (RAB geranylger 99.2 4.1E-10 1.4E-14 111.0 15.1 123 3-128 59-194 (567)
137 2kck_A TPR repeat; tetratricop 99.1 1.5E-10 5E-15 85.7 8.8 86 40-125 2-89 (112)
138 2kc7_A BFR218_protein; tetratr 99.1 5E-10 1.7E-14 82.8 11.4 79 47-125 3-84 (99)
139 3dra_A Protein farnesyltransfe 99.1 1E-09 3.5E-14 100.4 15.4 122 3-127 99-235 (306)
140 2r5s_A Uncharacterized protein 99.1 4.9E-10 1.7E-14 92.1 11.9 104 3-106 36-172 (176)
141 1ouv_A Conserved hypothetical 99.1 3.3E-09 1.1E-13 92.3 17.8 112 4-124 35-158 (273)
142 3ulq_A Response regulator aspa 99.1 5.3E-10 1.8E-14 102.5 13.2 104 6-109 183-295 (383)
143 2fbn_A 70 kDa peptidylprolyl i 99.1 3.6E-10 1.2E-14 94.4 11.0 95 8-105 89-184 (198)
144 3q15_A PSP28, response regulat 99.1 7.9E-10 2.7E-14 101.4 14.2 105 6-110 181-293 (378)
145 2qfc_A PLCR protein; TPR, HTH, 99.1 4.8E-10 1.6E-14 99.6 12.3 102 7-108 155-267 (293)
146 3dra_A Protein farnesyltransfe 99.1 1.5E-09 5E-14 99.4 15.5 121 3-126 63-194 (306)
147 3ro3_A PINS homolog, G-protein 99.1 9.5E-10 3.2E-14 85.8 12.3 103 8-110 50-161 (164)
148 1kt0_A FKBP51, 51 kDa FK506-bi 99.1 3.7E-10 1.3E-14 107.8 11.9 91 7-100 317-407 (457)
149 1dce_A Protein (RAB geranylger 99.1 4.8E-10 1.7E-14 110.5 12.8 122 3-127 103-241 (567)
150 3rkv_A Putative peptidylprolyl 99.1 1.9E-10 6.7E-15 93.0 8.3 90 3-95 59-149 (162)
151 3ro2_A PINS homolog, G-protein 99.1 5.7E-10 2E-14 97.2 11.9 119 6-127 4-138 (338)
152 3k9i_A BH0479 protein; putativ 99.1 3.6E-10 1.2E-14 86.8 9.4 87 3-92 23-109 (117)
153 1na0_A Designed protein CTPR3; 99.1 2E-09 6.7E-14 80.7 13.2 87 3-92 39-125 (125)
154 3gw4_A Uncharacterized protein 99.1 5.5E-10 1.9E-14 91.9 10.9 104 5-108 24-137 (203)
155 3sf4_A G-protein-signaling mod 99.1 9.4E-10 3.2E-14 99.4 13.5 121 4-127 6-142 (406)
156 1pc2_A Mitochondria fission pr 99.1 1E-09 3.5E-14 90.6 12.4 103 23-128 14-121 (152)
157 2if4_A ATFKBP42; FKBP-like, al 99.1 8.4E-11 2.9E-15 107.9 6.4 104 8-114 231-335 (338)
158 2ifu_A Gamma-SNAP; membrane fu 99.1 5.5E-10 1.9E-14 100.3 11.4 103 7-111 116-227 (307)
159 3u3w_A Transcriptional activat 99.1 6.9E-10 2.4E-14 98.6 11.7 116 11-126 119-250 (293)
160 3qou_A Protein YBBN; thioredox 99.1 8.7E-10 3E-14 98.4 12.1 104 3-106 147-283 (287)
161 3q15_A PSP28, response regulat 99.1 1.4E-09 4.7E-14 99.8 13.7 121 6-126 140-275 (378)
162 2c2l_A CHIP, carboxy terminus 99.1 2.7E-10 9.2E-15 101.6 8.5 116 3-123 34-180 (281)
163 2qfc_A PLCR protein; TPR, HTH, 99.1 2.7E-09 9.1E-14 94.8 15.0 120 9-128 117-252 (293)
164 2ifu_A Gamma-SNAP; membrane fu 99.1 5.6E-10 1.9E-14 100.2 10.6 104 7-111 76-188 (307)
165 1elw_A TPR1-domain of HOP; HOP 99.1 3E-09 1E-13 79.0 12.9 84 43-126 3-86 (118)
166 3dss_A Geranylgeranyl transfer 99.1 5.5E-09 1.9E-13 96.6 17.1 123 2-127 59-194 (331)
167 3dss_A Geranylgeranyl transfer 99.1 5.6E-09 1.9E-13 96.6 16.9 119 3-124 104-239 (331)
168 4f3v_A ESX-1 secretion system 99.0 1.3E-09 4.6E-14 98.6 12.4 112 3-118 132-247 (282)
169 3sf4_A G-protein-signaling mod 99.0 2.1E-09 7E-14 97.2 13.1 121 8-128 228-363 (406)
170 2xev_A YBGF; tetratricopeptide 99.0 4E-09 1.4E-13 80.8 12.2 81 46-126 4-90 (129)
171 2dba_A Smooth muscle cell asso 99.0 4E-09 1.4E-13 82.1 11.9 88 40-127 24-114 (148)
172 3n71_A Histone lysine methyltr 99.0 5.8E-09 2E-13 101.2 15.2 114 9-122 311-442 (490)
173 1zu2_A Mitochondrial import re 99.0 1.1E-09 3.8E-14 91.0 8.7 73 3-78 32-125 (158)
174 1ihg_A Cyclophilin 40; ppiase 99.0 1.5E-09 5.2E-14 101.1 10.8 94 4-100 270-363 (370)
175 3qww_A SET and MYND domain-con 99.0 4.6E-09 1.6E-13 100.4 14.2 111 12-122 303-431 (433)
176 2kat_A Uncharacterized protein 99.0 4.1E-09 1.4E-13 80.2 11.2 87 2-91 14-102 (115)
177 3ro2_A PINS homolog, G-protein 99.0 3.8E-09 1.3E-13 91.9 12.4 119 7-125 183-316 (338)
178 3rjv_A Putative SEL1 repeat pr 99.0 2.9E-09 1E-13 90.7 11.3 112 5-124 16-137 (212)
179 3q7a_A Farnesyltransferase alp 99.0 4.7E-09 1.6E-13 97.8 13.3 119 3-124 119-254 (349)
180 3rjv_A Putative SEL1 repeat pr 99.0 4.1E-09 1.4E-13 89.8 11.9 115 4-125 47-175 (212)
181 3q7a_A Farnesyltransferase alp 99.0 5.1E-09 1.7E-13 97.5 13.1 122 3-127 84-216 (349)
182 4a1s_A PINS, partner of inscut 99.0 1.6E-09 5.5E-14 99.0 9.6 121 6-126 222-357 (411)
183 1elr_A TPR2A-domain of HOP; HO 99.0 5.2E-09 1.8E-13 79.2 10.6 84 43-126 3-93 (131)
184 2v5f_A Prolyl 4-hydroxylase su 99.0 1E-08 3.5E-13 78.2 12.1 80 46-125 7-93 (104)
185 3bee_A Putative YFRE protein; 98.9 6.4E-09 2.2E-13 78.5 10.3 83 40-122 2-87 (93)
186 3gw4_A Uncharacterized protein 98.9 8.6E-09 3E-13 84.6 11.8 104 6-109 65-178 (203)
187 3qwp_A SET and MYND domain-con 98.9 2E-08 6.9E-13 95.7 15.0 116 9-124 289-422 (429)
188 2ooe_A Cleavage stimulation fa 98.9 1.7E-08 5.7E-13 97.0 14.4 118 3-123 317-436 (530)
189 2v5f_A Prolyl 4-hydroxylase su 98.9 2.6E-08 8.8E-13 75.9 12.6 82 4-85 2-87 (104)
190 2ooe_A Cleavage stimulation fa 98.8 4.4E-08 1.5E-12 94.0 13.3 112 3-117 268-395 (530)
191 1hz4_A MALT regulatory protein 98.8 1.4E-07 4.9E-12 85.4 16.0 116 9-124 55-186 (373)
192 4f3v_A ESX-1 secretion system 98.8 2E-08 6.7E-13 91.0 9.3 117 8-128 103-224 (282)
193 1klx_A Cysteine rich protein B 98.7 1.2E-07 4.2E-12 75.6 12.4 98 13-119 31-136 (138)
194 1nzn_A CGI-135 protein, fissio 98.7 1.7E-07 6E-12 74.8 11.7 104 21-127 15-123 (126)
195 3n71_A Histone lysine methyltr 98.7 3.3E-08 1.1E-12 95.9 8.9 106 3-108 347-465 (490)
196 1hz4_A MALT regulatory protein 98.7 2.2E-07 7.5E-12 84.2 13.5 102 8-109 94-205 (373)
197 2xm6_A Protein corresponding t 98.7 1.6E-07 5.5E-12 89.1 12.2 108 6-120 327-448 (490)
198 2xm6_A Protein corresponding t 98.6 1.2E-06 4.2E-11 83.0 16.5 111 4-123 36-158 (490)
199 3bee_A Putative YFRE protein; 98.6 3E-07 1E-11 69.2 9.6 72 3-77 2-76 (93)
200 3e4b_A ALGK; tetratricopeptide 98.6 2.9E-07 1E-11 87.4 11.7 110 6-123 175-294 (452)
201 1pc2_A Mitochondria fission pr 98.5 8.4E-07 2.9E-11 73.1 11.0 83 3-88 28-115 (152)
202 3ly7_A Transcriptional activat 98.5 2.9E-06 9.7E-11 79.4 15.7 105 6-114 195-346 (372)
203 3e4b_A ALGK; tetratricopeptide 98.4 1.4E-06 4.7E-11 82.7 11.9 109 4-123 245-365 (452)
204 1klx_A Cysteine rich protein B 98.4 3.6E-06 1.2E-10 66.9 11.2 93 21-124 9-105 (138)
205 3o48_A Mitochondria fission 1 98.3 4.2E-06 1.5E-10 67.2 10.8 87 40-126 36-126 (134)
206 1y8m_A FIS1; mitochondria, unk 98.3 2E-05 6.9E-10 64.0 14.2 88 41-128 36-127 (144)
207 4b4t_Q 26S proteasome regulato 98.2 4.9E-06 1.7E-10 76.4 9.9 103 7-109 55-206 (434)
208 3mv2_B Coatomer subunit epsilo 98.2 2.2E-05 7.6E-10 71.8 14.0 112 5-119 98-219 (310)
209 4b4t_Q 26S proteasome regulato 98.2 1.1E-05 3.6E-10 74.1 11.4 102 6-107 134-245 (434)
210 3u64_A Protein TP_0956; tetrat 98.2 5E-06 1.7E-10 75.4 9.0 105 3-110 148-272 (301)
211 1xi4_A Clathrin heavy chain; a 98.1 1.7E-05 5.8E-10 84.9 13.3 108 6-124 1194-1326(1630)
212 3mv2_B Coatomer subunit epsilo 98.1 2.9E-05 9.9E-10 71.0 12.5 116 5-126 134-269 (310)
213 1b89_A Protein (clathrin heavy 98.1 7.4E-06 2.5E-10 78.4 8.6 102 8-125 123-254 (449)
214 3qwp_A SET and MYND domain-con 98.1 6.6E-06 2.2E-10 78.3 7.8 89 3-91 325-426 (429)
215 3qww_A SET and MYND domain-con 98.0 2E-05 6.9E-10 75.1 10.3 78 3-80 336-423 (433)
216 3ffl_A Anaphase-promoting comp 97.9 0.00019 6.6E-09 59.6 13.0 113 8-121 21-164 (167)
217 1xi4_A Clathrin heavy chain; a 97.9 8.4E-05 2.9E-09 79.7 13.2 93 13-110 1055-1166(1630)
218 1nzn_A CGI-135 protein, fissio 97.9 9.1E-05 3.1E-09 59.0 10.3 83 3-88 31-118 (126)
219 4h7y_A Dual specificity protei 97.7 0.0012 4.1E-08 54.2 13.6 113 2-115 8-131 (161)
220 3o48_A Mitochondria fission 1 97.6 0.00068 2.3E-08 54.3 10.9 81 6-89 39-123 (134)
221 1y8m_A FIS1; mitochondria, unk 97.5 0.0015 5.3E-08 52.9 11.6 82 4-88 36-121 (144)
222 3u64_A Protein TP_0956; tetrat 97.5 0.0014 4.9E-08 59.3 12.5 82 39-120 147-247 (301)
223 1b89_A Protein (clathrin heavy 97.4 0.00012 4E-09 70.2 5.4 90 6-104 60-174 (449)
224 3ly7_A Transcriptional activat 97.3 0.00062 2.1E-08 63.6 8.9 79 3-86 273-351 (372)
225 3ffl_A Anaphase-promoting comp 97.3 0.001 3.4E-08 55.3 9.2 81 7-88 63-165 (167)
226 4e6h_A MRNA 3'-END-processing 97.3 0.0018 6.1E-08 65.0 12.6 75 46-120 436-512 (679)
227 4e6h_A MRNA 3'-END-processing 97.1 0.0056 1.9E-07 61.4 14.1 99 9-109 436-535 (679)
228 2ff4_A Probable regulatory pro 97.1 0.0059 2E-07 57.0 13.3 112 9-121 117-254 (388)
229 3kae_A CDC27, possible protein 96.9 0.03 1E-06 47.0 13.9 100 10-117 36-153 (242)
230 4gns_B Protein CSD3, chitin bi 96.4 0.013 4.6E-07 59.4 10.1 60 45-104 338-397 (754)
231 2uy1_A Cleavage stimulation fa 96.3 0.11 3.8E-06 49.7 15.5 113 3-117 209-359 (493)
232 4g26_A Pentatricopeptide repea 96.0 0.17 5.7E-06 48.6 15.4 109 6-116 104-215 (501)
233 3txn_A 26S proteasome regulato 95.8 0.13 4.5E-06 48.2 13.4 96 12-107 104-210 (394)
234 4b4t_R RPN7, 26S proteasome re 95.7 0.068 2.3E-06 50.4 11.2 102 9-110 133-240 (429)
235 1ya0_A SMG-7 transcript varian 95.6 0.074 2.5E-06 51.4 10.8 80 46-125 154-233 (497)
236 2uy1_A Cleavage stimulation fa 95.3 0.27 9.3E-06 46.9 13.7 109 8-124 287-396 (493)
237 1zbp_A Hypothetical protein VP 94.9 0.12 4.2E-06 46.0 9.2 63 53-115 6-68 (273)
238 4gns_B Protein CSD3, chitin bi 94.7 0.058 2E-06 54.7 7.4 60 8-70 338-397 (754)
239 1zbp_A Hypothetical protein VP 94.6 0.42 1.4E-05 42.5 12.0 64 14-80 4-67 (273)
240 4fhn_B Nucleoporin NUP120; pro 94.4 0.26 8.9E-06 52.0 11.9 100 4-103 839-963 (1139)
241 1ya0_A SMG-7 transcript varian 93.9 0.4 1.4E-05 46.3 11.1 79 9-90 154-232 (497)
242 4b4t_P 26S proteasome regulato 93.8 0.93 3.2E-05 42.8 13.4 100 8-107 138-247 (445)
243 4g26_A Pentatricopeptide repea 93.7 0.88 3E-05 43.5 13.3 91 22-114 85-178 (501)
244 3mkq_A Coatomer beta'-subunit; 92.8 3.2 0.00011 40.5 16.1 26 7-32 681-706 (814)
245 2ff4_A Probable regulatory pro 92.4 0.59 2E-05 43.2 9.5 60 9-71 173-232 (388)
246 3mkq_B Coatomer subunit alpha; 92.3 1.9 6.6E-05 35.7 11.6 50 13-70 11-60 (177)
247 3mkq_A Coatomer beta'-subunit; 91.7 1.2 4.3E-05 43.5 11.5 46 54-104 662-707 (814)
248 4b4t_S RPN3, 26S proteasome re 91.3 0.38 1.3E-05 46.7 7.0 70 42-111 229-303 (523)
249 3spa_A Mtrpol, DNA-directed RN 88.7 7.2 0.00025 41.0 14.3 99 10-108 130-231 (1134)
250 4h7y_A Dual specificity protei 87.5 4.5 0.00015 33.0 9.6 81 8-93 62-142 (161)
251 3kae_A CDC27, possible protein 86.9 5.2 0.00018 33.5 9.8 80 15-105 10-89 (242)
252 3mkq_B Coatomer subunit alpha; 85.6 3.5 0.00012 34.1 8.3 54 43-104 7-60 (177)
253 3t5v_B Nuclear mRNA export pro 84.1 2.6 8.8E-05 40.1 7.7 65 47-111 179-254 (455)
254 4b4t_S RPN3, 26S proteasome re 82.2 11 0.00037 36.5 11.2 66 11-76 235-302 (523)
255 1wy6_A Hypothetical protein ST 82.0 8.5 0.00029 31.1 8.7 53 56-108 103-155 (172)
256 3txn_A 26S proteasome regulato 80.6 12 0.00041 34.8 10.7 99 8-106 20-127 (394)
257 1qsa_A Protein (soluble lytic 80.2 5.5 0.00019 39.3 8.7 57 50-106 291-347 (618)
258 4gq2_M Nucleoporin NUP120; bet 78.2 8.4 0.00029 39.8 9.7 97 12-115 815-935 (950)
259 2vkj_A TM1634; membrane protei 76.9 6.3 0.00021 29.1 5.9 31 6-36 52-82 (106)
260 3mkr_B Coatomer subunit alpha; 76.7 32 0.0011 31.0 11.9 110 7-116 102-236 (320)
261 2w2u_A Hypothetical P60 katani 75.4 14 0.00047 26.5 7.5 30 7-36 19-48 (83)
262 2v6y_A AAA family ATPase, P60 75.0 14 0.00049 26.3 7.5 30 7-36 11-40 (83)
263 4a5x_A MITD1, MIT domain-conta 74.0 12 0.0004 27.0 6.9 30 7-36 16-45 (86)
264 4fhn_B Nucleoporin NUP120; pro 71.2 22 0.00075 37.3 10.8 94 13-113 818-935 (1139)
265 4b4t_R RPN7, 26S proteasome re 70.6 4.6 0.00016 37.6 5.0 65 43-107 130-197 (429)
266 4gq2_M Nucleoporin NUP120; bet 70.5 48 0.0017 34.1 13.1 70 5-74 838-927 (950)
267 2cfu_A SDSA1; SDS-hydrolase, l 70.2 17 0.00059 35.9 9.3 54 78-131 449-502 (658)
268 4b4t_P 26S proteasome regulato 69.9 22 0.00074 33.2 9.5 67 7-73 177-247 (445)
269 3mv2_A Coatomer subunit alpha; 67.4 72 0.0025 28.8 15.1 110 8-119 115-248 (325)
270 2v6x_A Vacuolar protein sortin 66.8 21 0.00072 25.3 6.9 30 7-36 13-42 (85)
271 2ijq_A Hypothetical protein; s 66.6 29 0.00098 28.1 8.4 60 48-107 36-104 (161)
272 1wfd_A Hypothetical protein 15 66.6 21 0.0007 26.1 6.9 30 7-36 15-44 (93)
273 2ijq_A Hypothetical protein; s 65.9 40 0.0014 27.3 9.1 65 9-73 34-104 (161)
274 2wpv_A GET4, UPF0363 protein Y 65.4 75 0.0026 28.3 12.9 27 76-102 132-158 (312)
275 3esl_A Checkpoint serine/threo 65.1 53 0.0018 27.6 10.0 81 28-109 58-146 (202)
276 3t5x_A PCI domain-containing p 64.4 16 0.00055 30.5 6.7 90 8-105 15-109 (203)
277 1wy6_A Hypothetical protein ST 64.1 43 0.0015 27.0 8.6 61 10-73 93-154 (172)
278 3ax2_A Mitochondrial import re 63.6 15 0.00051 25.9 5.3 25 12-36 22-46 (73)
279 3re2_A Predicted protein; meni 62.8 49 0.0017 30.7 9.8 45 63-107 276-325 (472)
280 3t5x_A PCI domain-containing p 59.8 21 0.00072 29.7 6.6 54 42-95 12-70 (203)
281 2cpt_A SKD1 protein, vacuolar 59.4 12 0.00042 28.6 4.6 17 19-35 30-46 (117)
282 3lpz_A GET4 (YOR164C homolog); 59.3 1E+02 0.0035 27.8 12.2 26 76-101 134-159 (336)
283 3spa_A Mtrpol, DNA-directed RN 59.2 68 0.0023 33.8 11.3 76 44-119 127-208 (1134)
284 2cfu_A SDSA1; SDS-hydrolase, l 56.8 19 0.00064 35.6 6.6 46 48-93 453-498 (658)
285 2crb_A Nuclear receptor bindin 56.1 20 0.00067 26.5 4.9 27 44-70 15-41 (97)
286 3u84_A Menin; MLL, JUND, ledgf 55.6 71 0.0024 30.2 9.8 61 63-123 298-369 (550)
287 1oy3_D Transcription factor in 55.5 2.5 8.4E-05 35.5 0.0 20 235-254 253-272 (282)
288 1om2_A Protein (mitochondrial 53.9 22 0.00076 26.3 5.0 25 12-36 25-49 (95)
289 2crb_A Nuclear receptor bindin 53.8 19 0.00066 26.6 4.6 25 12-36 20-44 (97)
290 2wvi_A Mitotic checkpoint seri 53.5 52 0.0018 26.6 7.7 77 27-109 43-127 (164)
291 3qnk_A Putative lipoprotein; a 53.5 33 0.0011 32.5 7.7 48 60-107 153-211 (517)
292 3ax2_A Mitochondrial import re 52.7 39 0.0013 23.6 5.9 32 83-114 22-53 (73)
293 3hdx_A SUSD homolog, SUSD supe 51.7 39 0.0013 31.6 7.7 48 60-107 156-226 (478)
294 2br9_A 14-3-3E, 14-3-3 protein 51.3 36 0.0012 29.3 6.7 48 24-71 147-200 (234)
295 3myv_A SUSD superfamily protei 50.3 35 0.0012 31.8 7.1 30 78-107 190-219 (454)
296 4a1g_A Mitotic checkpoint seri 49.8 46 0.0016 26.6 6.8 78 26-109 47-132 (152)
297 3i4g_A SUSD-like carbohydrate 49.1 42 0.0014 32.0 7.6 48 60-107 167-227 (528)
298 3jq1_A SUSD superfamily protei 48.3 27 0.00093 32.8 6.0 64 43-106 109-208 (481)
299 2o8p_A 14-3-3 domain containin 47.5 1.3E+02 0.0045 25.6 10.7 55 19-73 137-197 (227)
300 1o9d_A 14-3-3-like protein C; 47.1 44 0.0015 29.2 6.7 48 24-71 152-205 (260)
301 3kez_A Putative sugar binding 46.8 40 0.0014 31.4 6.9 30 78-107 196-225 (461)
302 1qsa_A Protein (soluble lytic 46.7 69 0.0024 31.3 8.8 113 12-125 219-332 (618)
303 4a5x_A MITD1, MIT domain-conta 46.5 77 0.0026 22.6 7.0 24 47-70 19-42 (86)
304 2npu_A FKBP12-rapamycin comple 46.3 58 0.002 25.2 6.6 77 50-126 46-124 (126)
305 2vkj_A TM1634; membrane protei 46.1 86 0.0029 23.0 7.5 48 78-126 53-104 (106)
306 3uzd_A 14-3-3 protein gamma; s 45.5 49 0.0017 28.7 6.7 48 24-71 148-201 (248)
307 3mcx_A SUSD superfamily protei 45.3 40 0.0014 31.5 6.7 31 78-108 202-232 (477)
308 3re2_A Predicted protein; meni 44.6 37 0.0013 31.5 5.9 46 26-71 276-323 (472)
309 3t5v_B Nuclear mRNA export pro 44.5 76 0.0026 29.9 8.4 65 13-77 182-254 (455)
310 4b4t_O 26S proteasome regulato 44.2 1.8E+02 0.0063 26.3 11.3 91 16-106 85-197 (393)
311 3ubw_A 14-3-3E, 14-3-3 protein 44.0 54 0.0018 28.7 6.7 48 24-71 173-226 (261)
312 3rau_A Tyrosine-protein phosph 43.5 1.8E+02 0.0063 26.2 10.7 27 80-106 254-280 (363)
313 3lew_A SUSD-like carbohydrate 43.5 51 0.0017 31.1 7.1 30 78-107 203-232 (495)
314 1wfd_A Hypothetical protein 15 43.2 91 0.0031 22.5 7.0 10 62-71 14-23 (93)
315 2cwy_A Hypothetical protein TT 43.2 77 0.0026 23.0 6.6 55 50-106 7-67 (94)
316 2w2u_A Hypothetical P60 katani 42.1 37 0.0013 24.2 4.6 22 50-71 25-46 (83)
317 2cwy_A Hypothetical protein TT 42.0 65 0.0022 23.4 6.0 59 11-72 5-67 (94)
318 2dl1_A Spartin; SPG20, MIT, st 41.9 25 0.00086 27.0 3.8 15 60-74 19-33 (116)
319 3iqu_A 14-3-3 protein sigma; s 41.6 61 0.0021 27.8 6.7 48 24-71 150-203 (236)
320 3myv_A SUSD superfamily protei 41.3 42 0.0014 31.2 6.1 13 44-56 111-123 (454)
321 3u84_A Menin; MLL, JUND, ledgf 41.2 44 0.0015 31.6 5.9 46 25-70 297-344 (550)
322 3lew_A SUSD-like carbohydrate 40.5 71 0.0024 30.0 7.6 14 43-56 118-131 (495)
323 2v6y_A AAA family ATPase, P60 40.4 47 0.0016 23.5 4.9 16 55-70 22-37 (83)
324 2npm_A 14-3-3 domain containin 40.4 66 0.0022 28.1 6.8 49 24-72 173-226 (260)
325 4gq4_A Menin; tumor suppressor 39.9 47 0.0016 31.3 5.9 31 76-106 301-331 (489)
326 3kez_A Putative sugar binding 39.2 70 0.0024 29.7 7.3 12 240-251 396-407 (461)
327 3otn_A SUSD superfamily protei 38.7 36 0.0012 31.9 5.2 47 60-106 160-225 (482)
328 2v6x_A Vacuolar protein sortin 38.4 1E+02 0.0034 21.6 7.0 15 91-105 26-40 (85)
329 2rpa_A Katanin P60 ATPase-cont 37.2 32 0.0011 24.4 3.4 28 9-36 14-41 (78)
330 1om2_A Protein (mitochondrial 36.7 48 0.0017 24.4 4.5 27 84-110 26-52 (95)
331 2qx5_A Nucleoporin NIC96; mRNA 35.8 1.8E+02 0.0061 28.8 9.8 97 11-111 447-570 (661)
332 3mcx_A SUSD superfamily protei 34.9 50 0.0017 30.8 5.5 14 44-57 123-136 (477)
333 3qnk_A Putative lipoprotein; a 33.4 85 0.0029 29.6 7.0 33 41-73 179-211 (517)
334 2rpa_A Katanin P60 ATPase-cont 33.3 37 0.0013 24.1 3.3 26 47-72 15-40 (78)
335 2cpt_A SKD1 protein, vacuolar 32.8 59 0.002 24.7 4.7 14 57-70 31-44 (117)
336 3ckc_A SUSD; TPR repeat, carbo 32.2 95 0.0033 29.0 7.1 62 44-105 129-230 (527)
337 3qtm_A Uncharacterized protein 31.9 2.7E+02 0.0093 24.7 10.0 83 9-91 24-132 (346)
338 3hdx_A SUSD homolog, SUSD supe 30.6 1.1E+02 0.0037 28.5 7.1 31 43-73 196-226 (478)
339 3jys_A SUSD superfamily protei 30.1 77 0.0026 29.9 6.0 62 44-105 120-221 (499)
340 4gq4_A Menin; tumor suppressor 29.8 3.6E+02 0.012 25.4 12.8 46 25-70 282-329 (489)
341 3jq1_A SUSD superfamily protei 29.6 64 0.0022 30.2 5.3 48 25-72 156-208 (481)
342 4fm3_A Uncharacterized hypothe 29.6 1.7E+02 0.0058 21.6 6.5 28 8-35 35-62 (98)
343 3snx_A SUSD homolog, putative 29.5 1E+02 0.0034 28.7 6.6 29 78-106 191-219 (460)
344 4aez_C MAD3, mitotic spindle c 29.1 1.5E+02 0.0052 25.1 7.1 50 61-110 131-182 (223)
345 2yin_A DOCK2, dedicator of cyt 28.9 1.2E+02 0.0041 28.2 7.0 26 11-36 39-64 (436)
346 2xs1_A Programmed cell death 6 28.9 4.1E+02 0.014 26.1 11.3 27 80-106 262-288 (704)
347 2yhe_A SEC-alkyl sulfatase; hy 32.4 14 0.00047 36.8 0.0 45 50-94 467-511 (668)
348 3ihv_A SUSD homolog; NP_813570 26.0 3.2E+02 0.011 25.5 9.7 104 3-106 71-232 (535)
349 2pm7_A Protein WEB1, protein t 25.4 3.9E+02 0.013 24.4 10.6 46 79-128 337-383 (399)
350 3snx_A SUSD homolog, putative 24.9 1.2E+02 0.0041 28.1 6.3 13 44-56 107-119 (460)
351 2ynq_A ESSB; membrane protein, 24.8 2.7E+02 0.0093 22.4 11.4 110 9-129 10-120 (161)
352 2yhe_A SEC-alkyl sulfatase; hy 29.5 17 0.00057 36.2 0.0 57 76-132 459-515 (668)
353 3f1j_A Matrix protein, GP18, P 23.7 25 0.00084 26.6 0.9 12 270-281 119-130 (142)
354 2byk_A Chrac-16; nucleosome sl 23.0 18 0.0006 28.7 0.0 7 69-75 27-33 (140)
355 3i4g_A SUSD-like carbohydrate 22.8 1.7E+02 0.0057 27.7 6.9 33 41-73 195-227 (528)
356 3iv0_A SUSD homolog; NP_809186 22.2 1.1E+02 0.0038 28.4 5.5 63 43-105 124-239 (481)
357 2jpu_A ORF C02003 protein; sol 20.7 1.3E+02 0.0044 23.4 4.6 31 6-36 6-36 (129)
358 3efz_A 14-3-3 protein; 14-3-3, 20.3 1.6E+02 0.0055 25.7 5.6 50 24-73 169-226 (268)
359 2e2a_A Protein (enzyme IIA); h 20.3 1.1E+02 0.0038 22.8 4.0 31 6-36 19-49 (105)
360 2dl1_A Spartin; SPG20, MIT, st 20.2 1.4E+02 0.0048 22.8 4.6 46 20-76 16-61 (116)
No 1
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.88 E-value=6.4e-22 Score=157.37 Aligned_cols=117 Identities=25% Similarity=0.474 Sum_probs=113.3
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM 82 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~ 82 (281)
+|..++.++++|+.+|+.|+|.+|+.+|+++|.+ +|.++.+|+++|.||+++|++++|+.+|.++|+++|.++.+|+
T Consensus 9 nP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~---~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 85 (126)
T 4gco_A 9 NPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKR---DPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYI 85 (126)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHH
Confidence 6788999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 023491 83 LRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLK 122 (281)
Q Consensus 83 ~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~ 122 (281)
++|.++..+|++++|+.+|+++++++|++..++..++.+.
T Consensus 86 ~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 86 RKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 9999999999999999999999999999999998887763
No 2
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.81 E-value=6.4e-19 Score=137.43 Aligned_cols=119 Identities=24% Similarity=0.301 Sum_probs=114.6
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHH
Q 023491 4 PAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALML 83 (281)
Q Consensus 4 P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~ 83 (281)
|+.+..++.+|..++..|+|.+|+..|.+++.+ +|.+..+++++|.||+++|+|++|+.+|.+++.++|.++.+|++
T Consensus 1 p~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~---~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 77 (126)
T 3upv_A 1 SMKAEEARLEGKEYFTKSDWPNAVKAYTEMIKR---APEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIR 77 (126)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh---CCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHH
Confidence 567889999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHh
Q 023491 84 RAQTLVTLKEYNSALFDVNRLIELN------PSSEVYQNLQARLKTQL 125 (281)
Q Consensus 84 lg~a~~~~g~~~eAl~~~ekAL~ld------P~~~~a~~~l~~l~~~l 125 (281)
+|.++..+|++++|+..|+++++++ |.+..++..+..+...+
T Consensus 78 lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 78 KATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999 99999999999887764
No 3
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.81 E-value=9.8e-19 Score=142.61 Aligned_cols=123 Identities=22% Similarity=0.350 Sum_probs=113.8
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc---------------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 023491 6 APANKIERAHQLYRDGRYEEALGFYTEALSVAKI---------------KQQKIALHSNRAACYLKLHDFKKAAEECTSV 70 (281)
Q Consensus 6 ~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~---------------~p~~~~a~~nra~~~~klg~y~~Ai~~~~~a 70 (281)
.+..++.+|+.++..|+|.+|+..|.++|.+.+. +|....+|+++|.||+++|+|.+|+.+|.++
T Consensus 10 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~a 89 (162)
T 3rkv_A 10 SVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEV 89 (162)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 4678999999999999999999999999998431 5677899999999999999999999999999
Q ss_pred HHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHhhcC
Q 023491 71 LELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSE-VYQNLQARLKTQLSLA 128 (281)
Q Consensus 71 l~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~-~a~~~l~~l~~~l~~~ 128 (281)
|.++|.++.+|+++|.+|..+|++++|+.+|++++.++|++. .+...+..+...+...
T Consensus 90 l~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~ 148 (162)
T 3rkv_A 90 LKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEK 148 (162)
T ss_dssp HHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998 7888898888877644
No 4
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.79 E-value=1.9e-18 Score=142.53 Aligned_cols=108 Identities=19% Similarity=0.154 Sum_probs=105.0
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM 82 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~ 82 (281)
+|.++..++.+|..++..|+|++|+.+|.+++.+ +|.++.+|+++|.||+.+|+|++|+..|.+++.++|+++.+|+
T Consensus 32 ~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~---~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~ 108 (151)
T 3gyz_A 32 PDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIY---DFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVF 108 (151)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHH
Confidence 6788999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 023491 83 LRAQTLVTLKEYNSALFDVNRLIELNPSSEV 113 (281)
Q Consensus 83 ~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~ 113 (281)
++|.+|..+|++++|+.+|++++++.|+.+.
T Consensus 109 ~lg~~~~~lg~~~eA~~~~~~al~l~~~~~~ 139 (151)
T 3gyz_A 109 HTGQCQLRLKAPLKAKECFELVIQHSNDEKL 139 (151)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCHHH
Confidence 9999999999999999999999999998763
No 5
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.77 E-value=9.3e-18 Score=133.02 Aligned_cols=112 Identities=15% Similarity=0.241 Sum_probs=100.9
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCC-------
Q 023491 5 AAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNH------- 77 (281)
Q Consensus 5 ~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~------- 77 (281)
..+.+++++|+.+++.|+|++|+.+|+++|.+ +|.++.+|+++|.||+++|+|++|+.+|.++|+++|.+
T Consensus 6 d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~---~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~ 82 (127)
T 4gcn_A 6 DAAIAEKDLGNAAYKQKDFEKAHVHYDKAIEL---DPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLI 82 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHH
Confidence 35778899999999999999999999999999 99999999999999999999999999999999998865
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 023491 78 TGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQAR 120 (281)
Q Consensus 78 ~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~ 120 (281)
+.+|+++|.++..+|++.+|+.+|+++|.+.|+. .....+..
T Consensus 83 a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~~-~~~~~l~~ 124 (127)
T 4gcn_A 83 AKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRDP-ELVKKVKE 124 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCCH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCH-HHHHHHHH
Confidence 3689999999999999999999999999999864 44343333
No 6
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.77 E-value=1.4e-18 Score=145.19 Aligned_cols=118 Identities=16% Similarity=0.175 Sum_probs=107.3
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcc-------c-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 6 APANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQ-------K-----IALHSNRAACYLKLHDFKKAAEECTSVLEL 73 (281)
Q Consensus 6 ~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~-------~-----~~a~~nra~~~~klg~y~~Ai~~~~~al~i 73 (281)
.+..++..|+.++..|+|++|+..|+++|.+ +|. + +.+|+|+|.|+.++|+|++|+.+|+++|++
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l---~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l 86 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEI---SHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHY 86 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH---HTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhh---CCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 3567899999999999999999999999999 554 3 449999999999999999999999999999
Q ss_pred -------cCCCHHHH----HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh
Q 023491 74 -------DYNHTGAL----MLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLS 126 (281)
Q Consensus 74 -------~p~~~~a~----~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~ 126 (281)
+|++..+| |++|.++..+|++++|+.+|+++++++|++..+...+..+++.+.
T Consensus 87 ~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~~~~~ 150 (159)
T 2hr2_A 87 FNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMMEVAI 150 (159)
T ss_dssp HHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHHHHHH
T ss_pred hhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 99999999 999999999999999999999999999998777777777766654
No 7
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.77 E-value=7.6e-18 Score=137.13 Aligned_cols=123 Identities=16% Similarity=0.178 Sum_probs=115.2
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM 82 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~ 82 (281)
+|.++..++..|..++..|+|.+|+..|.+++.. +|.++.+++++|.+|+.+|+|++|+..|.+++.++|+++.+++
T Consensus 17 ~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~---~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~ 93 (148)
T 2vgx_A 17 SSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVL---DHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPF 93 (148)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHH
T ss_pred CHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHc---CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHH
Confidence 5778889999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcC
Q 023491 83 LRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLSLA 128 (281)
Q Consensus 83 ~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~~~ 128 (281)
++|.+|..+|++++|+.+|+++++++|+++....++.++...+...
T Consensus 94 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~~l 139 (148)
T 2vgx_A 94 HAAECLLQXGELAEAESGLFLAQELIANXPEFXELSTRVSSMLEAI 139 (148)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcchHHHHHHHHHHHHH
Confidence 9999999999999999999999999999887777777777666543
No 8
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.76 E-value=7.7e-18 Score=134.93 Aligned_cols=121 Identities=15% Similarity=0.163 Sum_probs=114.1
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM 82 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~ 82 (281)
+|.++..++..|..++..|+|.+|+.+|.+++.. +|.+..+++++|.+|+++|+|++|+..|.+++.++|.++.+++
T Consensus 14 ~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~---~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 90 (142)
T 2xcb_A 14 SEDTLEQLYALGFNQYQAGKWDDAQKIFQALCML---DHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPF 90 (142)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHH
T ss_pred CHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHh---CCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHH
Confidence 5778889999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh
Q 023491 83 LRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLS 126 (281)
Q Consensus 83 ~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~ 126 (281)
++|.+|..+|++++|+..|++++.++|+++....++.++...+.
T Consensus 91 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~ 134 (142)
T 2xcb_A 91 HAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAMLE 134 (142)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHH
Confidence 99999999999999999999999999998877777777766654
No 9
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.76 E-value=5.8e-18 Score=137.81 Aligned_cols=119 Identities=18% Similarity=0.134 Sum_probs=110.5
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHH
Q 023491 4 PAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALML 83 (281)
Q Consensus 4 P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~ 83 (281)
|.++..++..|.+++..|+|++|+.+|.++|.+ +|.++.+|+++|.+|+++|++++|+..|.++++++|+++.+|++
T Consensus 28 p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~---~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 104 (150)
T 4ga2_A 28 RQKSIKGFYFAKLYYEAKEYDLAKKYICTYINV---QERDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLK 104 (150)
T ss_dssp HHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHH
Confidence 455667889999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHH-HHHHHHhCCCCHHHHHHHHHHHHHh
Q 023491 84 RAQTLVTLKEYNSALFD-VNRLIELNPSSEVYQNLQARLKTQL 125 (281)
Q Consensus 84 lg~a~~~~g~~~eAl~~-~ekAL~ldP~~~~a~~~l~~l~~~l 125 (281)
+|.+|..+|++.+|+.. +++|++++|+++.+..+++.|....
T Consensus 105 la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~~~ 147 (150)
T 4ga2_A 105 IAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLDCE 147 (150)
T ss_dssp HHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHHTC
T ss_pred HHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHh
Confidence 99999999999887766 5999999999999999888876543
No 10
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.76 E-value=1.5e-17 Score=135.72 Aligned_cols=120 Identities=20% Similarity=0.200 Sum_probs=110.6
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM 82 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~ 82 (281)
++.++..++.+|.+++..|+|.+|+.+|.+++.+ +|.+..+++++|.||+++|+|++|+.+|.+++.++|.++.+|+
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~---~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 83 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSI---APANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWS 83 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 4567889999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH--HHHHHHHHHHHh
Q 023491 83 LRAQTLVTLKEYNSALFDVNRLIELNPSSEV--YQNLQARLKTQL 125 (281)
Q Consensus 83 ~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~--a~~~l~~l~~~l 125 (281)
++|.+|..+|++++|+.+|+++++++|++.. +...+..++..+
T Consensus 84 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~ 128 (164)
T 3sz7_A 84 RLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTKRKI 128 (164)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999877 444455555444
No 11
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.74 E-value=7.9e-17 Score=126.09 Aligned_cols=120 Identities=23% Similarity=0.365 Sum_probs=113.1
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM 82 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~ 82 (281)
+|.++..++..|..++..|+|.+|+.+|.+++.. +|.+..+++++|.|++.+|+|++|+..|.+++.++|.++.+++
T Consensus 5 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~---~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 81 (137)
T 3q49_B 5 KSPSAQELKEQGNRLFVGRKYPEAAACYGRAITR---NPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHF 81 (137)
T ss_dssp -CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred ccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh---CcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHH
Confidence 5778999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCC-----CHHHHHHHHHHHHHh
Q 023491 83 LRAQTLVTLKEYNSALFDVNRLIELNPS-----SEVYQNLQARLKTQL 125 (281)
Q Consensus 83 ~lg~a~~~~g~~~eAl~~~ekAL~ldP~-----~~~a~~~l~~l~~~l 125 (281)
++|.++..+|++.+|+..|++++.++|+ +..+...+..++...
T Consensus 82 ~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~ 129 (137)
T 3q49_B 82 FLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKR 129 (137)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998 777888877776654
No 12
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=7.6e-16 Score=121.05 Aligned_cols=118 Identities=32% Similarity=0.521 Sum_probs=111.9
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCccc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQK---IALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTG 79 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~---~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~ 79 (281)
+|.++..++..|..++..|+|.+|+.+|.+++.. .|.. ..+++++|.+|+.+|+|++|+..|.+++.++|.+..
T Consensus 24 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~---~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 100 (148)
T 2dba_A 24 GASSVEQLRKEGNELFKCGDYGGALAAYTQALGL---DATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVK 100 (148)
T ss_dssp TCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTS---CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHH
T ss_pred chHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH---cccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHH
Confidence 4678999999999999999999999999999998 7766 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 023491 80 ALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKT 123 (281)
Q Consensus 80 a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~ 123 (281)
+++++|.++..+|++++|+..|++++.++|++..++..+..+..
T Consensus 101 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 144 (148)
T 2dba_A 101 ALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNISG 144 (148)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999988877753
No 13
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.70 E-value=5.8e-16 Score=132.04 Aligned_cols=118 Identities=13% Similarity=0.151 Sum_probs=112.0
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHH----------------HHHHHHHcCCHHHHHHHHH
Q 023491 5 AAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSN----------------RAACYLKLHDFKKAAEECT 68 (281)
Q Consensus 5 ~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~n----------------ra~~~~klg~y~~Ai~~~~ 68 (281)
.++..++.+|..++..|+|.+|+.+|.+++.. +|.++.+++. +|.+|+++|+|++|+..|.
T Consensus 2 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~---~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~ 78 (208)
T 3urz_A 2 QSVDEMLQKVSAAIEAGQNGQAVSYFRQTIAL---NIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYK 78 (208)
T ss_dssp -CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh---CCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 36788999999999999999999999999999 9999999999 9999999999999999999
Q ss_pred HHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 023491 69 SVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQL 125 (281)
Q Consensus 69 ~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l 125 (281)
++++++|+++.+++++|.++..+|++++|+.+|+++++++|++..++..++.+....
T Consensus 79 ~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~ 135 (208)
T 3urz_A 79 ELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLT 135 (208)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998876443
No 14
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.70 E-value=4.5e-16 Score=119.90 Aligned_cols=120 Identities=25% Similarity=0.424 Sum_probs=114.5
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM 82 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~ 82 (281)
.|.++..++..|..++..|+|.+|+.+|.+++.. .|.+..+++++|.+++.+|++++|+..|.+++.++|.+..+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~---~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 88 (133)
T 2lni_A 12 NPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKR---NPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYT 88 (133)
T ss_dssp SSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTT---CTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc---CCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHH
Confidence 5678899999999999999999999999999998 8889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 023491 83 LRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQL 125 (281)
Q Consensus 83 ~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l 125 (281)
++|.++..+|++.+|+..|++++.++|.+..++..++.+...+
T Consensus 89 ~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~ 131 (133)
T 2lni_A 89 RKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQ 131 (133)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999888887654
No 15
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.69 E-value=1.5e-15 Score=115.83 Aligned_cols=121 Identities=21% Similarity=0.322 Sum_probs=114.8
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHH
Q 023491 4 PAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALML 83 (281)
Q Consensus 4 P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~ 83 (281)
|.++..++..|..++..|+|..|+.+|.+++.. .|....+++++|.+++.+|++++|+..|.+++.++|.+..+++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~---~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 85 (131)
T 2vyi_A 9 SAEAERLKTEGNEQMKVENFEAAVHFYGKAIEL---NPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGR 85 (131)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHc---CCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHH
Confidence 456788999999999999999999999999998 88899999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhc
Q 023491 84 RAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLSL 127 (281)
Q Consensus 84 lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~~ 127 (281)
+|.++..+|++.+|+..|++++.++|.+..++..++.+...++.
T Consensus 86 ~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 129 (131)
T 2vyi_A 86 MGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLRE 129 (131)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999988877654
No 16
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.69 E-value=4.1e-16 Score=143.32 Aligned_cols=122 Identities=26% Similarity=0.423 Sum_probs=115.2
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCccc---------------HHHHHHHHHHHHHcCCHHHHHHHHH
Q 023491 4 PAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQK---------------IALHSNRAACYLKLHDFKKAAEECT 68 (281)
Q Consensus 4 P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~---------------~~a~~nra~~~~klg~y~~Ai~~~~ 68 (281)
|.++..++.+|..++..|+|.+|+.+|.+++.+ .|.. +.+++++|.||+++|+|++|+.+|.
T Consensus 144 p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~---~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~ 220 (336)
T 1p5q_A 144 LEQSTIVKERGTVYFKEGKYKQALLQYKKIVSW---LEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCN 220 (336)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH---TTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH---hhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 456788999999999999999999999999999 7766 7999999999999999999999999
Q ss_pred HHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcC
Q 023491 69 SVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLSLA 128 (281)
Q Consensus 69 ~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~~~ 128 (281)
++|.++|.++.+|+++|.+|..+|++++|+.+|+++++++|++..++..++.+...++..
T Consensus 221 ~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~ 280 (336)
T 1p5q_A 221 KALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQ 280 (336)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998877644
No 17
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.69 E-value=1.6e-15 Score=113.85 Aligned_cols=115 Identities=20% Similarity=0.272 Sum_probs=110.1
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHH
Q 023491 6 APANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRA 85 (281)
Q Consensus 6 ~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg 85 (281)
.+..++..|..++..|+|.+|+.+|.+++.. .|.+..+++++|.+++.+|++++|+..|.+++.++|.+..+++.+|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~---~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a 79 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKL---DPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKA 79 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHH---CCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHH
Confidence 4678999999999999999999999999999 8899999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 023491 86 QTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKT 123 (281)
Q Consensus 86 ~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~ 123 (281)
.++..+|++.+|+..|+++++++|++..++..++.+.+
T Consensus 80 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 117 (118)
T 1elw_A 80 AALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEA 117 (118)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhhc
Confidence 99999999999999999999999999999988887754
No 18
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.69 E-value=1.2e-15 Score=128.19 Aligned_cols=120 Identities=23% Similarity=0.269 Sum_probs=111.8
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccH----------------HHHHHHHHHHHHcCCHHHHHHHHHH
Q 023491 6 APANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKI----------------ALHSNRAACYLKLHDFKKAAEECTS 69 (281)
Q Consensus 6 ~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~----------------~a~~nra~~~~klg~y~~Ai~~~~~ 69 (281)
.+..++..|..++..|+|.+|+.+|.+++.+ .|... .+++++|.||+++|+|++|+.+|.+
T Consensus 37 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~---~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 113 (198)
T 2fbn_A 37 SAFDIKEEGNEFFKKNEINEAIVKYKEALDF---FIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASK 113 (198)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT---TTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH---HhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 4667889999999999999999999999998 44443 8999999999999999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcC
Q 023491 70 VLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLSLA 128 (281)
Q Consensus 70 al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~~~ 128 (281)
++.++|.+..+++++|.+|..+|++++|+..|++++.++|++..++..++.+...+...
T Consensus 114 al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 172 (198)
T 2fbn_A 114 VLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEA 172 (198)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998877543
No 19
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.69 E-value=5.1e-16 Score=157.38 Aligned_cols=124 Identities=18% Similarity=0.109 Sum_probs=84.4
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM 82 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~ 82 (281)
+|.++.++.++|.+++..|+|++|+.+|.++|.+ +|..+.+|+++|.+|+.+|++++|+..|+++|+++|+++.+|+
T Consensus 39 ~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l---~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~ 115 (723)
T 4gyw_A 39 FPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRI---SPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHS 115 (723)
T ss_dssp CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 4566666666666666666666666666666666 6666666666776666677777777777777777777777777
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCC
Q 023491 83 LRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLSLAP 129 (281)
Q Consensus 83 ~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~~~~ 129 (281)
++|.+|..+|++++|+..|++||+++|++..++.+++.+...+....
T Consensus 116 ~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~ 162 (723)
T 4gyw_A 116 NLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWT 162 (723)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHH
Confidence 77777777777777777777777777777777666666666655443
No 20
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.68 E-value=7.8e-16 Score=132.08 Aligned_cols=119 Identities=24% Similarity=0.220 Sum_probs=82.6
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHH
Q 023491 4 PAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALML 83 (281)
Q Consensus 4 P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~ 83 (281)
|.++..++.+|.+++..|++.+|+..|.+++.. +|.++.+++++|.+++++|++++|+..|.++++++|+++.++++
T Consensus 2 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~---~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~ 78 (217)
T 2pl2_A 2 QTAEQNPLRLGVQLYALGRYDAALTLFERALKE---NPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMV 78 (217)
T ss_dssp --CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTT---SSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHH
Confidence 456666777777777777777777777777776 67777777777777777777777777777777777777777777
Q ss_pred HHHHHHHc-----------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 023491 84 RAQTLVTL-----------KEYNSALFDVNRLIELNPSSEVYQNLQARLKTQL 125 (281)
Q Consensus 84 lg~a~~~~-----------g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l 125 (281)
+|.++..+ |++++|+..|+++++++|++..++.+++.+...+
T Consensus 79 lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~ 131 (217)
T 2pl2_A 79 LSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALL 131 (217)
T ss_dssp HHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHc
Confidence 77777777 7777777777777777777776666666665544
No 21
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.68 E-value=3.2e-16 Score=150.12 Aligned_cols=121 Identities=26% Similarity=0.391 Sum_probs=109.8
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCccc---------------HHHHHHHHHHHHHcCCHHHHHHHHH
Q 023491 4 PAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQK---------------IALHSNRAACYLKLHDFKKAAEECT 68 (281)
Q Consensus 4 P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~---------------~~a~~nra~~~~klg~y~~Ai~~~~ 68 (281)
|..+..++.+|+.++..|+|.+|+.+|.++|.+ .|.. ..+|+|+|.||+++|+|++|+.+|.
T Consensus 265 ~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~---~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~ 341 (457)
T 1kt0_A 265 LEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSW---LEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCD 341 (457)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---HTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH---hcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 456778999999999999999999999999998 6655 7999999999999999999999999
Q ss_pred HHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhc
Q 023491 69 SVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLSL 127 (281)
Q Consensus 69 ~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~~ 127 (281)
++|.++|++..+|+++|.+|+.+|+|++|+.+|+++++++|++..++..++.+...+..
T Consensus 342 ~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~ 400 (457)
T 1kt0_A 342 KALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKE 400 (457)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHH
T ss_pred HHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988887654
No 22
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.67 E-value=2.3e-15 Score=116.49 Aligned_cols=116 Identities=15% Similarity=0.196 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCC---HHHH
Q 023491 8 ANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKI---ALHSNRAACYLKLHDFKKAAEECTSVLELDYNH---TGAL 81 (281)
Q Consensus 8 ~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~---~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~---~~a~ 81 (281)
..++..|.+++..|+|.+|+..|.+++.. .|... .+++++|.+++++|+|++|+..|.+++..+|++ +.++
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~---~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~ 79 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLEL---YPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGL 79 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHH---CSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHH---CCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHH
Confidence 35788999999999999999999999998 55555 899999999999999999999999999999999 8999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh
Q 023491 82 MLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLS 126 (281)
Q Consensus 82 ~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~ 126 (281)
+.+|.++..+|++++|+..|++++...|++..+...+..+.....
T Consensus 80 ~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l~~ 124 (129)
T 2xev_A 80 LKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQSIRL 124 (129)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999888888776543
No 23
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.66 E-value=4e-15 Score=126.84 Aligned_cols=120 Identities=18% Similarity=0.243 Sum_probs=108.9
Q ss_pred CCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCc-ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHH
Q 023491 2 ASPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQ-QKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGA 80 (281)
Q Consensus 2 a~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p-~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a 80 (281)
+.+.++..++..|.+++..|+|.+|+..|.+++.+ .| .+..+++++|.|++.+|+|++|+..|.+++.++|.+..+
T Consensus 2 a~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~---~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 78 (228)
T 4i17_A 2 AQTTDPNQLKNEGNDALNAKNYAVAFEKYSEYLKL---TNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANA 78 (228)
T ss_dssp --CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---TTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHH
T ss_pred ccccCHHHHHHHHHHHHHccCHHHHHHHHHHHHhc---cCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHH
Confidence 34678899999999999999999999999999999 77 788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-------HHHHHHHHHHH
Q 023491 81 LMLRAQTLVTLKEYNSALFDVNRLIELNPSSEV-------YQNLQARLKTQ 124 (281)
Q Consensus 81 ~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~-------a~~~l~~l~~~ 124 (281)
++.+|.++..+|++.+|+..|++++.++|++.. +...++.+...
T Consensus 79 ~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~ 129 (228)
T 4i17_A 79 YIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQ 129 (228)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHH
Confidence 999999999999999999999999999999994 45555555443
No 24
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.66 E-value=2.3e-15 Score=152.62 Aligned_cols=122 Identities=21% Similarity=0.228 Sum_probs=116.9
Q ss_pred CCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHH
Q 023491 2 ASPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGAL 81 (281)
Q Consensus 2 a~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~ 81 (281)
..|.++.++.++|.++...|+|++|+.+|+++|.+ +|..+.+++++|.+|+++|++++|+..|+++|+++|+++.+|
T Consensus 4 s~P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l---~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~ 80 (723)
T 4gyw_A 4 SCPTHADSLNNLANIKREQGNIEEAVRLYRKALEV---FPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAY 80 (723)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 36899999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh
Q 023491 82 MLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLS 126 (281)
Q Consensus 82 ~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~ 126 (281)
+++|.+|..+|++++|+.+|++|++++|++..++.+++.+...++
T Consensus 81 ~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g 125 (723)
T 4gyw_A 81 SNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSG 125 (723)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999998877655
No 25
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.66 E-value=1e-15 Score=144.15 Aligned_cols=121 Identities=15% Similarity=0.103 Sum_probs=108.0
Q ss_pred CCCCHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGR-YEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGAL 81 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gd-y~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~ 81 (281)
+|.++.+++.+|.+++..|+ |.+|+.+|.++|.+ +|.+..+|++||.++..+|+|++|+.+|.++|.++|++..+|
T Consensus 127 ~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l---~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~ 203 (382)
T 2h6f_A 127 NAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEE---QPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAW 203 (382)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHH
T ss_pred CccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHH
Confidence 68888899999999999996 99999999999998 888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh
Q 023491 82 MLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLS 126 (281)
Q Consensus 82 ~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~ 126 (281)
+++|.++..+|++++|+.+|+++|+++|++..++.+++.+...+.
T Consensus 204 ~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l~ 248 (382)
T 2h6f_A 204 QHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTT 248 (382)
T ss_dssp HHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999988888877743
No 26
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.66 E-value=9.6e-16 Score=120.44 Aligned_cols=103 Identities=13% Similarity=0.023 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 023491 8 ANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQT 87 (281)
Q Consensus 8 ~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a 87 (281)
..++.+|..++..|++.+|+..|.+++.. +|.+..+++++|.+++.+|++++|+..|.++++++|++..+++.+|.+
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~---~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~ 94 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQK---EPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVS 94 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHH---STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 45788999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHH
Q 023491 88 LVTLKEYNSALFDVNRLIELNPSSEV 113 (281)
Q Consensus 88 ~~~~g~~~eAl~~~ekAL~ldP~~~~ 113 (281)
+..+|++++|+..|+++++++|.+..
T Consensus 95 ~~~~g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 95 HTNEHNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHC-------
T ss_pred HHHcCCHHHHHHHHHHHHHhCcCCCC
Confidence 99999999999999999999998653
No 27
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.66 E-value=3.5e-15 Score=114.04 Aligned_cols=120 Identities=17% Similarity=0.267 Sum_probs=111.6
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCC-------
Q 023491 5 AAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNH------- 77 (281)
Q Consensus 5 ~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~------- 77 (281)
..+..++..|..++..|+|..|+.+|.+++.. .|....+++++|.+++.+|+|++|+..|.+++.+.|.+
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~---~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 78 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKEL---DPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQI 78 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc---CCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHH
Confidence 45778999999999999999999999999999 88899999999999999999999999999999998877
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcC
Q 023491 78 TGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLSLA 128 (281)
Q Consensus 78 ~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~~~ 128 (281)
..+++++|.++..+|++.+|+..|++++.+.| +..+...+..+...+...
T Consensus 79 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~ 128 (131)
T 1elr_A 79 AKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKEQ 128 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999 688888888888776543
No 28
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.66 E-value=3.7e-15 Score=127.79 Aligned_cols=122 Identities=13% Similarity=0.076 Sum_probs=106.0
Q ss_pred CCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHc-----------CCHHHHHHHHHHH
Q 023491 2 ASPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKL-----------HDFKKAAEECTSV 70 (281)
Q Consensus 2 a~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~kl-----------g~y~~Ai~~~~~a 70 (281)
.+|.++..++.+|.+++..|++++|+..|.+++.+ +|.+..+++++|.+++.+ |++++|+..|.++
T Consensus 34 ~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~---~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a 110 (217)
T 2pl2_A 34 ENPQDPEALYWLARTQLKLGLVNPALENGKTLVAR---TPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDA 110 (217)
T ss_dssp TSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHH
Confidence 36888888999999999999999999999999988 888888889999999888 8999999999999
Q ss_pred HHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhc
Q 023491 71 LELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLSL 127 (281)
Q Consensus 71 l~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~~ 127 (281)
++++|+++.+++++|.++..+|++++|+..|+++++++ ++..++..++.+...++.
T Consensus 111 l~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~ 166 (217)
T 2pl2_A 111 ERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGR 166 (217)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTC
T ss_pred HHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCC
Confidence 99999888888899999999999999999999988888 888888888877766543
No 29
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.65 E-value=3.1e-16 Score=127.51 Aligned_cols=114 Identities=13% Similarity=0.041 Sum_probs=104.6
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcC
Q 023491 13 RAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLK 92 (281)
Q Consensus 13 ~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g 92 (281)
+|..+...|+++.|+..|.+++.. .|..+.+++++|.+|+++|+|++|+..|.++|+++|+++.+|+++|.+|..+|
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~---~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~ 79 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPS---PRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEE 79 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCS---HHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred hHHHHHHcChHHHHHHHHHHhccc---CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 577788889999999999999998 88899999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCC
Q 023491 93 EYNSALFDVNRLIELNPSSEVYQNLQARLKTQLSLAP 129 (281)
Q Consensus 93 ~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~~~~ 129 (281)
++++|+.+|+++++++|++..++..++.+...++...
T Consensus 80 ~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~ 116 (150)
T 4ga2_A 80 NTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTD 116 (150)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSS
T ss_pred chHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChH
Confidence 9999999999999999999999999999887766543
No 30
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.65 E-value=1.5e-14 Score=109.27 Aligned_cols=120 Identities=23% Similarity=0.355 Sum_probs=111.2
Q ss_pred CCCC-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHH
Q 023491 3 SPAA-PANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGAL 81 (281)
Q Consensus 3 ~P~~-a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~ 81 (281)
+|.. +..++..|..++..|++.+|+.+|.+++.. .|....+++++|.+++..|++++|+..|.+++.+.|.+..++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~---~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 80 (125)
T 1na0_A 4 DPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALEL---DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAW 80 (125)
T ss_dssp ---CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH---CcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHH
Confidence 3444 788999999999999999999999999998 888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 023491 82 MLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQL 125 (281)
Q Consensus 82 ~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l 125 (281)
+.+|.++...|++.+|+..|++++.++|.+..+...++.+...+
T Consensus 81 ~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 124 (125)
T 1na0_A 81 YNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQ 124 (125)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999888876543
No 31
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.65 E-value=1.3e-14 Score=116.02 Aligned_cols=117 Identities=20% Similarity=0.334 Sum_probs=109.9
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHH
Q 023491 6 APANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRA 85 (281)
Q Consensus 6 ~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg 85 (281)
.+..++..|..++..|+|..|+..|.+++.. .|....+++++|.+++.+|+|.+|+..|.+++.++|.++.+++++|
T Consensus 12 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~---~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a 88 (166)
T 1a17_A 12 RAEELKTQANDYFKAKDYENAIKFYSQAIEL---NPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRA 88 (166)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHh---CCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHH
Confidence 4677899999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 023491 86 QTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQL 125 (281)
Q Consensus 86 ~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l 125 (281)
.++..+|++.+|+..|++++.++|.+..++..+..+...+
T Consensus 89 ~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~ 128 (166)
T 1a17_A 89 ASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIV 128 (166)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998887777665444
No 32
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.65 E-value=3.2e-15 Score=139.81 Aligned_cols=121 Identities=27% Similarity=0.438 Sum_probs=112.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh-------------cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 7 PANKIERAHQLYRDGRYEEALGFYTEALSVAK-------------IKQQKIALHSNRAACYLKLHDFKKAAEECTSVLEL 73 (281)
Q Consensus 7 a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~-------------~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i 73 (281)
+..++.+|..++..|+|.+|+.+|.++|.+.+ .++....+|+++|.||+++|+|++|+.+|.++|++
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 56788999999999999999999999998321 26788999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhc
Q 023491 74 DYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLSL 127 (281)
Q Consensus 74 ~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~~ 127 (281)
+|.++.+|+++|.+|..+|++++|+.+|++|++++|++..++..++.+...+..
T Consensus 303 ~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~ 356 (370)
T 1ihg_A 303 DPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKA 356 (370)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998887653
No 33
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.64 E-value=2.3e-15 Score=141.72 Aligned_cols=124 Identities=13% Similarity=0.067 Sum_probs=118.8
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhcCCCHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHD-FKKAAEECTSVLELDYNHTGAL 81 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~-y~~Ai~~~~~al~i~p~~~~a~ 81 (281)
+|.++.++..+|.++...|+|.+|+.+|.++|.+ +|.+..+|++||.+++.+|+ +++|+.+|.++|.++|++..+|
T Consensus 93 ~p~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l---~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~ 169 (382)
T 2h6f_A 93 SDKFRDVYDYFRAVLQRDERSERAFKLTRDAIEL---NAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVW 169 (382)
T ss_dssp CHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred ChhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHh---CccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHH
Confidence 5677899999999999999999999999999999 99999999999999999997 9999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCC
Q 023491 82 MLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLSLAP 129 (281)
Q Consensus 82 ~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~~~~ 129 (281)
+++|.++..+|++.+|+.+|+++|.++|++..++.+++.+...++...
T Consensus 170 ~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~ 217 (382)
T 2h6f_A 170 HHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWD 217 (382)
T ss_dssp HHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCT
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChH
Confidence 999999999999999999999999999999999999999998877553
No 34
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.63 E-value=3.2e-14 Score=117.02 Aligned_cols=119 Identities=12% Similarity=0.101 Sum_probs=85.3
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------------
Q 023491 6 APANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLEL------------ 73 (281)
Q Consensus 6 ~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i------------ 73 (281)
++.+++.+|.+++..|+|++|+..|+++|.+ +|.++.+++++|.+|+++|++++|+..+.+++..
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~---~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 80 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLKA---DPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILG 80 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHH
Confidence 5666777777777777777777777777776 6666666666666666666666665555555544
Q ss_pred ----------------------cCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhc
Q 023491 74 ----------------------DYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLSL 127 (281)
Q Consensus 74 ----------------------~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~~ 127 (281)
+|.+..+++.+|.++..+|++++|+..|+++++++|.+..++..++.+...++.
T Consensus 81 ~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~ 156 (184)
T 3vtx_A 81 SANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGL 156 (184)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCC
Confidence 466666777788888888888888888888888888888888888777766543
No 35
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.62 E-value=1.5e-14 Score=118.73 Aligned_cols=120 Identities=19% Similarity=0.226 Sum_probs=111.4
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHH-HHHcCCH--HHHHHHHHHHHHhcCCCHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAAC-YLKLHDF--KKAAEECTSVLELDYNHTG 79 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~-~~klg~y--~~Ai~~~~~al~i~p~~~~ 79 (281)
+|.++..++..|.+++..|+|.+|+.+|.+++.+ .|.+..+++++|.+ ++..|++ ++|+..|.+++.++|.+..
T Consensus 40 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~---~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~ 116 (177)
T 2e2e_A 40 NPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQL---RGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEIT 116 (177)
T ss_dssp CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---HCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHH
T ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc---CCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHH
Confidence 5889999999999999999999999999999999 88899999999999 8899999 9999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 023491 80 ALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQL 125 (281)
Q Consensus 80 a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l 125 (281)
+++.+|.++..+|++++|+..|++++.++|.+......+..+....
T Consensus 117 ~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~i~~~~ 162 (177)
T 2e2e_A 117 ALMLLASDAFMQANYAQAIELWQKVMDLNSPRINRTQLVESINMAK 162 (177)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999876666666665543
No 36
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.61 E-value=4.1e-14 Score=116.35 Aligned_cols=85 Identities=15% Similarity=0.159 Sum_probs=78.5
Q ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 023491 42 QKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARL 121 (281)
Q Consensus 42 ~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l 121 (281)
.++.+|+++|.+|+.+|+|++|+..|+++++++|+++.+++.+|.+|..+|++.+|+..+.+++...|.+..+...++.+
T Consensus 3 e~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 82 (184)
T 3vtx_A 3 ETTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSA 82 (184)
T ss_dssp -CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999988888777
Q ss_pred HHHhh
Q 023491 122 KTQLS 126 (281)
Q Consensus 122 ~~~l~ 126 (281)
.....
T Consensus 83 ~~~~~ 87 (184)
T 3vtx_A 83 NFMID 87 (184)
T ss_dssp HHHTT
T ss_pred HHHcC
Confidence 66543
No 37
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.61 E-value=3.7e-15 Score=111.10 Aligned_cols=106 Identities=12% Similarity=0.175 Sum_probs=102.4
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCC--CHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYN--HTGA 80 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~--~~~a 80 (281)
+|.++..++..|.+++..|+|.+|+.+|.+++.. .|....+++++|.+++.+|+|++|+..|.+++.++|. +..+
T Consensus 2 ~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~---~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 78 (112)
T 2kck_A 2 VDQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQL---DPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDV 78 (112)
T ss_dssp CCSSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHH
T ss_pred CCCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh---CcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHH
Confidence 5788899999999999999999999999999999 8999999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHc-CCHHHHHHHHHHHHHhCCCC
Q 023491 81 LMLRAQTLVTL-KEYNSALFDVNRLIELNPSS 111 (281)
Q Consensus 81 ~~~lg~a~~~~-g~~~eAl~~~ekAL~ldP~~ 111 (281)
++.+|.++..+ |++++|+.+|++++...|.+
T Consensus 79 ~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 79 WAAKADALRYIEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp HHHHHHHHTTCSSCSHHHHHHHHHHGGGCCCC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHhhcccCC
Confidence 99999999999 99999999999999999875
No 38
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.61 E-value=1.9e-14 Score=122.66 Aligned_cols=119 Identities=8% Similarity=0.001 Sum_probs=112.6
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCH------
Q 023491 5 AAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHT------ 78 (281)
Q Consensus 5 ~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~------ 78 (281)
.+...++.+|.+++..|+|.+|+..|.+++.. +|....+++++|.+|+.+|++++|+..|.+++.++|++.
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~---~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 116 (228)
T 4i17_A 40 QDSVTAYNCGVCADNIKKYKEAADYFDIAIKK---NYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLY 116 (228)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT---TCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred CCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHh---CcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHH
Confidence 67788999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred -HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHhh
Q 023491 79 -GALMLRAQTLVTLKEYNSALFDVNRLIELNPS--SEVYQNLQARLKTQLS 126 (281)
Q Consensus 79 -~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~--~~~a~~~l~~l~~~l~ 126 (281)
.+|+.+|.++..+|++++|+..|+++++++|+ +..++..++.+...++
T Consensus 117 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~ 167 (228)
T 4i17_A 117 AIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNG 167 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHH
Confidence 67999999999999999999999999999999 8899988888876544
No 39
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.60 E-value=1e-14 Score=130.54 Aligned_cols=105 Identities=25% Similarity=0.431 Sum_probs=102.3
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHH
Q 023491 4 PAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALML 83 (281)
Q Consensus 4 P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~ 83 (281)
|.++..++.+|..++..|+|.+|+.+|.+++.. +|.+..+++++|.+|+++|+|++|+.+|.+++.++|++..++++
T Consensus 1 p~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~---~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 77 (281)
T 2c2l_A 1 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITR---NPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFF 77 (281)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHH
T ss_pred ChhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 678999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023491 84 RAQTLVTLKEYNSALFDVNRLIELNPSS 111 (281)
Q Consensus 84 lg~a~~~~g~~~eAl~~~ekAL~ldP~~ 111 (281)
+|.+|..+|++++|+..|+++++++|++
T Consensus 78 lg~~~~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 78 LGQCQLEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999999999875
No 40
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.60 E-value=1.3e-14 Score=123.61 Aligned_cols=118 Identities=17% Similarity=0.138 Sum_probs=102.0
Q ss_pred CCCCHHHHHH----------------HHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHH
Q 023491 3 SPAAPANKIE----------------RAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEE 66 (281)
Q Consensus 3 ~P~~a~~l~~----------------~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~ 66 (281)
+|.++..++. +|.+++..|+|++|+..|.+++.+ +|.+..+++++|.+|+.+|++++|+..
T Consensus 34 ~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~---~p~~~~~~~~lg~~~~~~g~~~~A~~~ 110 (208)
T 3urz_A 34 NIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQK---APNNVDCLEACAEMQVCRGQEKDALRM 110 (208)
T ss_dssp CHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred CCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHcCCHHHHHHH
Confidence 4556667777 999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHhcCCCHHHHHHHHHHHHHc-----------------------------------CCHHHHHHHHHHHHHhCCCC
Q 023491 67 CTSVLELDYNHTGALMLRAQTLVTL-----------------------------------KEYNSALFDVNRLIELNPSS 111 (281)
Q Consensus 67 ~~~al~i~p~~~~a~~~lg~a~~~~-----------------------------------g~~~eAl~~~ekAL~ldP~~ 111 (281)
|+++++++|+++.+|+++|.+|+.+ |+|++|+.+|+++++++|+.
T Consensus 111 ~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 190 (208)
T 3urz_A 111 YEKILQLEADNLAANIFLGNYYYLTAEQEKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPST 190 (208)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCH
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCH
Confidence 9999999999999988888876543 46889999999999999975
Q ss_pred HHHHHHHHHHHHH
Q 023491 112 EVYQNLQARLKTQ 124 (281)
Q Consensus 112 ~~a~~~l~~l~~~ 124 (281)
. +...+.++...
T Consensus 191 ~-~~~~l~~i~~~ 202 (208)
T 3urz_A 191 E-AQKTLDKILRI 202 (208)
T ss_dssp H-HHHHHHHHHHH
T ss_pred H-HHHHHHHHHHH
Confidence 4 45556655443
No 41
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.59 E-value=1.6e-15 Score=139.65 Aligned_cols=118 Identities=24% Similarity=0.350 Sum_probs=93.5
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccH-----------------HHHHHHHHHHHHcCCHHHHHHHHH
Q 023491 6 APANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKI-----------------ALHSNRAACYLKLHDFKKAAEECT 68 (281)
Q Consensus 6 ~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~-----------------~a~~nra~~~~klg~y~~Ai~~~~ 68 (281)
.+..++.+|+.++..|+|.+|+.+|.+++.+ .|.+. .+|+++|.||+++|+|++|+.+|.
T Consensus 178 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~---~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~ 254 (338)
T 2if4_A 178 AADRRKMDGNSLFKEEKLEEAMQQYEMAIAY---MGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCN 254 (338)
T ss_dssp HHHHHHHHHHHTCSSSCCHHHHHHHHHHHHH---SCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH---hccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 5678899999999999999999999999998 66665 489999999999999999999999
Q ss_pred HHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh
Q 023491 69 SVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLS 126 (281)
Q Consensus 69 ~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~ 126 (281)
++|.++|.+..+|+++|.+|..+|+|++|+.+|+++++++|++..++..+..+...+.
T Consensus 255 ~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~ 312 (338)
T 2if4_A 255 IVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEK 312 (338)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC--------------------
T ss_pred HHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998888855443
No 42
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.57 E-value=8.8e-15 Score=121.96 Aligned_cols=106 Identities=11% Similarity=0.096 Sum_probs=97.7
Q ss_pred HHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhcCCCHHHHHHHHH
Q 023491 17 LYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDF----------KKAAEECTSVLELDYNHTGALMLRAQ 86 (281)
Q Consensus 17 ~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y----------~~Ai~~~~~al~i~p~~~~a~~~lg~ 86 (281)
.-+.+.|++|+..|.+++.+ +|.++.+|+++|.++..++++ ++|+..|+++|+++|++..+|+++|+
T Consensus 12 ~~r~~~feeA~~~~~~Ai~l---~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ 88 (158)
T 1zu2_A 12 FDRILLFEQIRQDAENTYKS---NPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGN 88 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHH
Confidence 34567899999999999999 999999999999999999876 59999999999999999999999999
Q ss_pred HHHHcC-----------CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 023491 87 TLVTLK-----------EYNSALFDVNRLIELNPSSEVYQNLQARLKTQL 125 (281)
Q Consensus 87 a~~~~g-----------~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l 125 (281)
+|..+| ++++|+.+|++|++++|++..++..+..+.+..
T Consensus 89 ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~~ka~ 138 (158)
T 1zu2_A 89 AYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAKAP 138 (158)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTHH
T ss_pred HHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhCH
Confidence 999885 899999999999999999999999888776654
No 43
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.56 E-value=1.8e-14 Score=111.40 Aligned_cols=108 Identities=15% Similarity=0.153 Sum_probs=93.8
Q ss_pred HcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHH
Q 023491 19 RDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEYNSAL 98 (281)
Q Consensus 19 ~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl 98 (281)
..|+|++|+.+|.+++.+...+|....+++++|.+|+.+|+|++|+..|.++++++|+++.+++++|.++..+|++++|+
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 81 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGV 81 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHH
Confidence 46899999999999999721138889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHhh
Q 023491 99 FDVNRLIELNPSSEVYQNLQARLKTQLS 126 (281)
Q Consensus 99 ~~~ekAL~ldP~~~~a~~~l~~l~~~l~ 126 (281)
..|++++.+.|+++.+......+.....
T Consensus 82 ~~~~~al~~~p~~~~~~~~~~ai~~~~~ 109 (117)
T 3k9i_A 82 ELLLKIIAETSDDETIQSYKQAILFYAD 109 (117)
T ss_dssp HHHHHHHHHHCCCHHHHHTHHHHHHHTT
T ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHHHH
Confidence 9999999999999988877766655443
No 44
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.55 E-value=7.6e-14 Score=118.74 Aligned_cols=116 Identities=24% Similarity=0.332 Sum_probs=108.8
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM 82 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~ 82 (281)
+|.++..+...|.+++..|+|.+|+..|.+++.. .|.+..+++++|.+++++|++++|+..|.+++.++|.++.+++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~---~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~ 211 (258)
T 3uq3_A 135 NPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKR---APEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYI 211 (258)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc---CcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHH
Confidence 4667788999999999999999999999999999 8899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHH
Q 023491 83 LRAQTLVTLKEYNSALFDVNRLIELN------PSSEVYQNLQARL 121 (281)
Q Consensus 83 ~lg~a~~~~g~~~eAl~~~ekAL~ld------P~~~~a~~~l~~l 121 (281)
.+|.++..+|++.+|+..|+++++++ |.+..++..+..+
T Consensus 212 ~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~p~~~~~~~~l~~~ 256 (258)
T 3uq3_A 212 RKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKA 256 (258)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHT
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhChhhcCCCchHHHHHHHHHh
Confidence 99999999999999999999999999 9888888777654
No 45
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.55 E-value=5.4e-13 Score=107.31 Aligned_cols=121 Identities=11% Similarity=0.109 Sum_probs=111.4
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM 82 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~ 82 (281)
.|.++..+...|.+++..|++.+|+.+|.+++.. .|....+++++|.+++..|++++|+..|.+++.+.|.+..+++
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~---~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 114 (186)
T 3as5_A 38 DAFDVDVALHLGIAYVKTGAVDRGTELLERSLAD---APDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRF 114 (186)
T ss_dssp TSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhc---CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHH
Confidence 4678889999999999999999999999999998 8888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh
Q 023491 83 LRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLS 126 (281)
Q Consensus 83 ~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~ 126 (281)
.+|.++...|++++|+..|++++.+.|.+..+...++.+...++
T Consensus 115 ~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 158 (186)
T 3as5_A 115 RLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMG 158 (186)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999988888888876654
No 46
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.54 E-value=1.9e-13 Score=114.45 Aligned_cols=103 Identities=11% Similarity=0.023 Sum_probs=64.5
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCH-------
Q 023491 6 APANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHT------- 78 (281)
Q Consensus 6 ~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~------- 78 (281)
++..++..|.+++..|+|.+|+..|.+++.+ +|....+++++|.+|+.+|+|++|+..|.+++.+.|.+.
T Consensus 36 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~---~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~ 112 (213)
T 1hh8_A 36 HSRICFNIGCMYTILKNMTEAEKAFTRSINR---DKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKIL 112 (213)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGG
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHh
Confidence 4555666666666666666666666666665 566666666666666666666666666666666555444
Q ss_pred ---------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023491 79 ---------GALMLRAQTLVTLKEYNSALFDVNRLIELNPSS 111 (281)
Q Consensus 79 ---------~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~ 111 (281)
.+++++|.++..+|++++|+..|++++.++|++
T Consensus 113 ~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 154 (213)
T 1hh8_A 113 GLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEP 154 (213)
T ss_dssp TBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSG
T ss_pred ccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccc
Confidence 566666666666666666666666666666644
No 47
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.53 E-value=1.5e-13 Score=119.68 Aligned_cols=110 Identities=18% Similarity=0.311 Sum_probs=102.5
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCccc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCC--
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQK---IALHSNRAACYLKLHDFKKAAEECTSVLELDYNH-- 77 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~---~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~-- 77 (281)
+|.++..++.+|..++..|+|.+|+..|.+++.. .|.. ..+++++|.||+++|+|.+|+..|.+++.+.|++
T Consensus 11 ~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~---~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~ 87 (261)
T 3qky_A 11 RHSSPQEAFERAMEFYNQGKYDRAIEYFKAVFTY---GRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPR 87 (261)
T ss_dssp CCSSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGG---CSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTT
T ss_pred CCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh---CCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCch
Confidence 4778999999999999999999999999999998 6665 9999999999999999999999999999998854
Q ss_pred -HHHHHHHHHHHHH--------cCCHHHHHHHHHHHHHhCCCCHHHH
Q 023491 78 -TGALMLRAQTLVT--------LKEYNSALFDVNRLIELNPSSEVYQ 115 (281)
Q Consensus 78 -~~a~~~lg~a~~~--------~g~~~eAl~~~ekAL~ldP~~~~a~ 115 (281)
..+++.+|.+++. +|++.+|+..|++++.+.|++..+.
T Consensus 88 ~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~ 134 (261)
T 3qky_A 88 VPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVD 134 (261)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHH
T ss_pred hHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHH
Confidence 6799999999999 9999999999999999999986665
No 48
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.53 E-value=2.7e-13 Score=116.82 Aligned_cols=114 Identities=18% Similarity=0.063 Sum_probs=107.1
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHH
Q 023491 4 PAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALML 83 (281)
Q Consensus 4 P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~ 83 (281)
|.++..++.+|.+++..|+|.+|+.+|.+++.. +|....+++++|.+|+.+|++++|+..|.+++.++|.+..+++.
T Consensus 40 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~---~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 116 (275)
T 1xnf_A 40 DERAQLLYERGVLYDSLGLRALARNDFSQALAI---RPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLN 116 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHH
T ss_pred chhHHHHHHHHHHHHHcccHHHHHHHHHHHHHc---CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHH
Confidence 567889999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 023491 84 RAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQAR 120 (281)
Q Consensus 84 lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~ 120 (281)
+|.++..+|++++|+..|++++.++|.+.....+...
T Consensus 117 la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 153 (275)
T 1xnf_A 117 RGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYL 153 (275)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 9999999999999999999999999999865554443
No 49
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.52 E-value=1.1e-12 Score=110.94 Aligned_cols=122 Identities=19% Similarity=0.190 Sum_probs=100.2
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM 82 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~ 82 (281)
+|.++..+...|.+++..|++.+|+..|.+++.. .|....+++++|.+++.+|++++|+..|.+++.+.|.+..+++
T Consensus 53 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~---~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 129 (243)
T 2q7f_A 53 NKEDAIPYINFANLLSSVNELERALAFYDKALEL---DSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFY 129 (243)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc---CCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHH
Confidence 5677888888888888888888888888888887 7778888888888888888888888888888888888888888
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhc
Q 023491 83 LRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLSL 127 (281)
Q Consensus 83 ~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~~ 127 (281)
.+|.++..+|++++|+..|++++.+.|.+..+...++.+...++.
T Consensus 130 ~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 174 (243)
T 2q7f_A 130 MLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGM 174 (243)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCC
Confidence 888888888888888888888888888888877777777665543
No 50
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.51 E-value=8.4e-13 Score=100.31 Aligned_cols=114 Identities=22% Similarity=0.300 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 023491 8 ANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQT 87 (281)
Q Consensus 8 ~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a 87 (281)
..++..|..++..|++.+|+..|.+++.. .|....+++++|.+++..|++++|+..|.+++.+.|.+..+++.+|.+
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~---~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 78 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALEL---DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNA 78 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHc---CCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHH
Confidence 46788999999999999999999999998 888899999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 023491 88 LVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQ 124 (281)
Q Consensus 88 ~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~ 124 (281)
+...|++++|+..|++++.+.|.+..+...++.+...
T Consensus 79 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 115 (136)
T 2fo7_A 79 YYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK 115 (136)
T ss_dssp HHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred HHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 9999999999999999999999998888877776644
No 51
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.51 E-value=3.2e-13 Score=117.68 Aligned_cols=124 Identities=18% Similarity=0.172 Sum_probs=110.2
Q ss_pred CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHH--------cCCHHHHHHHHHHHH
Q 023491 3 SPAA---PANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLK--------LHDFKKAAEECTSVL 71 (281)
Q Consensus 3 ~P~~---a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~k--------lg~y~~Ai~~~~~al 71 (281)
.|.+ +.+++.+|.+++..|+|.+|+..|.+++...|.++....+++++|.|++. +|++++|+..|.+++
T Consensus 45 ~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l 124 (261)
T 3qky_A 45 GRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFI 124 (261)
T ss_dssp CSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHH
T ss_pred CCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHH
Confidence 4556 89999999999999999999999999999955555778899999999999 999999999999999
Q ss_pred HhcCCCHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHhh
Q 023491 72 ELDYNHTGAL-----------------MLRAQTLVTLKEYNSALFDVNRLIELNPS---SEVYQNLQARLKTQLS 126 (281)
Q Consensus 72 ~i~p~~~~a~-----------------~~lg~a~~~~g~~~eAl~~~ekAL~ldP~---~~~a~~~l~~l~~~l~ 126 (281)
...|++..+. +.+|.+|+.+|+|.+|+..|++++...|+ ...+..+++.+...++
T Consensus 125 ~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g 199 (261)
T 3qky_A 125 DRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYA 199 (261)
T ss_dssp HHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHH
T ss_pred HHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhc
Confidence 9999886655 99999999999999999999999999998 4567777777666554
No 52
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.51 E-value=4.6e-13 Score=130.17 Aligned_cols=120 Identities=12% Similarity=0.025 Sum_probs=114.2
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM 82 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~ 82 (281)
+|.++..++.+|.+++..|+|++|+.+|.+++.+ +|.+..+++++|.+|+.+|++++|+..|.++++++|.+..+++
T Consensus 19 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~---~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 95 (568)
T 2vsy_A 19 RPQDFVAWLMLADAELGMGDTTAGEMAVQRGLAL---HPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIAL 95 (568)
T ss_dssp --CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT---STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHH
Confidence 5889999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 023491 83 LRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQL 125 (281)
Q Consensus 83 ~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l 125 (281)
++|.+|..+|++++|+..|+++++++|++..++..++.+...+
T Consensus 96 ~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 138 (568)
T 2vsy_A 96 WLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRL 138 (568)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999998888887766
No 53
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.50 E-value=1.3e-12 Score=110.48 Aligned_cols=123 Identities=17% Similarity=0.074 Sum_probs=112.7
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM 82 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~ 82 (281)
.|.++..+...|.+++..|++.+|+.+|.+++.. .|....+++++|.+++.+|++++|+..|.+++.+.|.+..+++
T Consensus 87 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~---~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 163 (243)
T 2q7f_A 87 DSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRA---GMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARF 163 (243)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---TCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHH
Confidence 4678889999999999999999999999999998 8888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcC
Q 023491 83 LRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLSLA 128 (281)
Q Consensus 83 ~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~~~ 128 (281)
.+|.++...|++++|+..|++++.++|.+..++..++.+...++..
T Consensus 164 ~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~ 209 (243)
T 2q7f_A 164 QFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENR 209 (243)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccCH
Confidence 9999999999999999999999999999999988888887766543
No 54
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.50 E-value=6.3e-13 Score=119.61 Aligned_cols=123 Identities=17% Similarity=0.156 Sum_probs=115.6
Q ss_pred CCC--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHH
Q 023491 3 SPA--APANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGA 80 (281)
Q Consensus 3 ~P~--~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a 80 (281)
+|. ++..+..+|.+++..|++++|+.+|.+++.. .|....+++++|.+++.+|++++|+..|.+++.++|.+..+
T Consensus 211 ~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~---~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 287 (368)
T 1fch_A 211 DPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSV---RPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRS 287 (368)
T ss_dssp STTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred CcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHH
Confidence 355 7889999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----------HHHHHHHHHHHHHhhcC
Q 023491 81 LMLRAQTLVTLKEYNSALFDVNRLIELNPSS-----------EVYQNLQARLKTQLSLA 128 (281)
Q Consensus 81 ~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~-----------~~a~~~l~~l~~~l~~~ 128 (281)
++++|.++..+|++.+|+..|++++.+.|.+ ..++..++.+...++..
T Consensus 288 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 346 (368)
T 1fch_A 288 RYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQS 346 (368)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCG
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCCh
Confidence 9999999999999999999999999999988 78888898888877654
No 55
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.50 E-value=3.6e-14 Score=116.72 Aligned_cols=100 Identities=8% Similarity=-0.045 Sum_probs=92.6
Q ss_pred HHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 023491 26 ALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLI 105 (281)
Q Consensus 26 Al~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL 105 (281)
+-..|.+++.+ +|.+..+++++|.+++++|+|++|+..|.+++.++|.++.+|+++|.+|..+|+|++|+.+|++++
T Consensus 21 ~~~~l~~al~l---~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al 97 (151)
T 3gyz_A 21 SGATLKDINAI---PDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAF 97 (151)
T ss_dssp TSCCTGGGCCS---CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCCCHHHHhCC---CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 33456777777 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHhhcC
Q 023491 106 ELNPSSEVYQNLQARLKTQLSLA 128 (281)
Q Consensus 106 ~ldP~~~~a~~~l~~l~~~l~~~ 128 (281)
.++|+++.++.+++.+...++..
T Consensus 98 ~l~P~~~~~~~~lg~~~~~lg~~ 120 (151)
T 3gyz_A 98 ALGKNDYTPVFHTGQCQLRLKAP 120 (151)
T ss_dssp HHSSSCCHHHHHHHHHHHHTTCH
T ss_pred hhCCCCcHHHHHHHHHHHHcCCH
Confidence 99999999999999998877643
No 56
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.50 E-value=1.1e-13 Score=138.82 Aligned_cols=120 Identities=14% Similarity=-0.022 Sum_probs=100.4
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM 82 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~ 82 (281)
+|.++..++.+|.+++..|+|++|+..|.+++.. +|.+..+++++|.+|+.+|+|++|+..|.++++++|+++.+|+
T Consensus 429 ~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~---~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~ 505 (681)
T 2pzi_A 429 FSESVELPLMEVRALLDLGDVAKATRKLDDLAER---VGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKL 505 (681)
T ss_dssp CTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHH---HCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHH
T ss_pred cccchhHHHHHHHHHHhcCCHHHHHHHHHHHhcc---CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHH
Confidence 4777888888888888888888888888888888 8888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh
Q 023491 83 LRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLS 126 (281)
Q Consensus 83 ~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~ 126 (281)
++|.++..+|++++ +..|+++++++|++..++.+++.+...++
T Consensus 506 ~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g 548 (681)
T 2pzi_A 506 ALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEG 548 (681)
T ss_dssp HHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcC
Confidence 88888888888888 88888888888888888888877776654
No 57
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.49 E-value=2.9e-13 Score=107.03 Aligned_cols=89 Identities=19% Similarity=0.135 Sum_probs=85.3
Q ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 023491 40 KQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQA 119 (281)
Q Consensus 40 ~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~ 119 (281)
+|..+.++.++|.+|++.|+|++|+..|.++|+++|.++.+|+++|.+|..+|++.+|+.+|+++++++|++..++..++
T Consensus 9 nP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg 88 (126)
T 4gco_A 9 NPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKA 88 (126)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcC
Q 023491 120 RLKTQLSLA 128 (281)
Q Consensus 120 ~l~~~l~~~ 128 (281)
.+...++..
T Consensus 89 ~~~~~~~~~ 97 (126)
T 4gco_A 89 ACLVAMREW 97 (126)
T ss_dssp HHHHHTTCH
T ss_pred HHHHHCCCH
Confidence 998776543
No 58
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.49 E-value=4.7e-13 Score=121.20 Aligned_cols=121 Identities=15% Similarity=0.144 Sum_probs=107.2
Q ss_pred CCC--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHH
Q 023491 3 SPA--APANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGA 80 (281)
Q Consensus 3 ~P~--~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a 80 (281)
+|. ++..+..+|.+++..|+|.+|+.+|.+++.. .|.+..+++++|.+|+.+|++++|+..|.+++.++|.++.+
T Consensus 207 ~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~---~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 283 (365)
T 4eqf_A 207 NGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTV---RPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRS 283 (365)
T ss_dssp SCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred CcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHH
Confidence 355 7889999999999999999999999999998 88899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------------HHHHHHHHHHHHHhh
Q 023491 81 LMLRAQTLVTLKEYNSALFDVNRLIELNPSS------------EVYQNLQARLKTQLS 126 (281)
Q Consensus 81 ~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~------------~~a~~~l~~l~~~l~ 126 (281)
++++|.+|..+|++.+|+..|++++.+.|.. ..++..+..+...++
T Consensus 284 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 341 (365)
T 4eqf_A 284 RYNLGISCINLGAYREAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMD 341 (365)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999998873 456666666665554
No 59
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.49 E-value=1.5e-12 Score=110.71 Aligned_cols=121 Identities=16% Similarity=0.214 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh-----------------------cCcccHHHHHHHHHHHHHcCCHHHH
Q 023491 7 PANKIERAHQLYRDGRYEEALGFYTEALSVAK-----------------------IKQQKIALHSNRAACYLKLHDFKKA 63 (281)
Q Consensus 7 a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~-----------------------~~p~~~~a~~nra~~~~klg~y~~A 63 (281)
+..+...|.+++..|++.+|+..|.+++.+.+ ..|....+++++|.+++..|++++|
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A 158 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNA 158 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHH
Confidence 68889999999999999999999999999311 2778899999999999999999999
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhc
Q 023491 64 AEECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLSL 127 (281)
Q Consensus 64 i~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~~ 127 (281)
+..|.+++.++|.++.+++.+|.++..+|++.+|+..|++++.++|++..++..++.+...++.
T Consensus 159 ~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~ 222 (258)
T 3uq3_A 159 VKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKE 222 (258)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999988877643
No 60
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.48 E-value=4.4e-13 Score=115.12 Aligned_cols=114 Identities=17% Similarity=0.218 Sum_probs=100.9
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHH---HH
Q 023491 5 AAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTG---AL 81 (281)
Q Consensus 5 ~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~---a~ 81 (281)
+++..++.+|..++..|+|.+|+..|.+++...|..+....+++++|.+|+++|+|++|+..|.++++.+|++.. ++
T Consensus 2 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~ 81 (225)
T 2yhc_A 2 NPPNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVM 81 (225)
T ss_dssp -CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHH
Confidence 367899999999999999999999999999984444445689999999999999999999999999999998864 89
Q ss_pred HHHHHHHHH------------------cCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 023491 82 MLRAQTLVT------------------LKEYNSALFDVNRLIELNPSSEVYQNLQ 118 (281)
Q Consensus 82 ~~lg~a~~~------------------~g~~~eAl~~~ekAL~ldP~~~~a~~~l 118 (281)
|.+|.+++. .|++++|+..|++++...|++..+...+
T Consensus 82 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~ 136 (225)
T 2yhc_A 82 YMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDAT 136 (225)
T ss_dssp HHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHH
T ss_pred HHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHH
Confidence 999999987 5799999999999999999987665443
No 61
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.48 E-value=1e-12 Score=110.02 Aligned_cols=114 Identities=12% Similarity=0.090 Sum_probs=103.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHH
Q 023491 7 PANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQ 86 (281)
Q Consensus 7 a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~ 86 (281)
+..++..|..++..|+|.+|+..|.+++. + .+.+++++|.+|+.+|+|++|+..|.+++.++|.++.+++++|.
T Consensus 6 ~~~~~~~g~~~~~~~~~~~A~~~~~~a~~-----~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~ 79 (213)
T 1hh8_A 6 AISLWNEGVLAADKKDWKGALDAFSAVQD-----P-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGM 79 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTSSS-----C-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHcC-----C-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 45678999999999999999999999853 2 57899999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCH----------------HHHHHHHHHHHHhh
Q 023491 87 TLVTLKEYNSALFDVNRLIELNPSSE----------------VYQNLQARLKTQLS 126 (281)
Q Consensus 87 a~~~~g~~~eAl~~~ekAL~ldP~~~----------------~a~~~l~~l~~~l~ 126 (281)
++..+|++.+|+..|++++.+.|.+. .++.+++.+...++
T Consensus 80 ~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 135 (213)
T 1hh8_A 80 LYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKE 135 (213)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTT
T ss_pred HHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHcc
Confidence 99999999999999999999998876 77787777766543
No 62
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.48 E-value=4.2e-14 Score=136.31 Aligned_cols=117 Identities=20% Similarity=0.328 Sum_probs=109.5
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHH
Q 023491 5 AAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLR 84 (281)
Q Consensus 5 ~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~l 84 (281)
..+..++.+|..++..|+|++|+.+|++++.+ +|..+.+++++|.+|+++|+|++|+..|.++++++|.++.+++++
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~---~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l 80 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIEL---NPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRR 80 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh---CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 34556778899999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 023491 85 AQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQ 124 (281)
Q Consensus 85 g~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~ 124 (281)
|.+|..+|++++|+..|+++++++|++..++.+++.+...
T Consensus 81 g~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~ 120 (477)
T 1wao_1 81 AASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKI 120 (477)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999888888887433
No 63
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.47 E-value=1.8e-12 Score=98.42 Aligned_cols=106 Identities=25% Similarity=0.400 Sum_probs=100.9
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM 82 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~ 82 (281)
+|.++..+...|..++..|++.+|+.+|.+++.. .|....+++++|.+++..|++++|+..|.+++.+.|.+..+++
T Consensus 31 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 107 (136)
T 2fo7_A 31 DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALEL---DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWY 107 (136)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHH---CCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHH
Confidence 4678888999999999999999999999999998 8888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023491 83 LRAQTLVTLKEYNSALFDVNRLIELNPSS 111 (281)
Q Consensus 83 ~lg~a~~~~g~~~eAl~~~ekAL~ldP~~ 111 (281)
.+|.++...|++.+|+..|++++.++|.+
T Consensus 108 ~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 108 NLGNAYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHccHHHHHHHHHHHHccCCCC
Confidence 99999999999999999999999999863
No 64
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.47 E-value=2.3e-12 Score=116.65 Aligned_cols=126 Identities=11% Similarity=0.042 Sum_probs=104.7
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh-----------------------------------------cCc
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAK-----------------------------------------IKQ 41 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~-----------------------------------------~~p 41 (281)
+|.++..+..+|.++...|+|.+|+.+|.+++.+.+ ..|
T Consensus 129 ~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p 208 (365)
T 4eqf_A 129 QPNNLKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNG 208 (365)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCHHHHHHHHHHHHHHHHSC
T ss_pred CCCCHHHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCc
Confidence 466777777888888888888877777777776532 123
Q ss_pred c--cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 023491 42 Q--KIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQA 119 (281)
Q Consensus 42 ~--~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~ 119 (281)
. ++.+++++|.+|+.+|++++|+..|.+++.++|.++.+|+++|.++..+|++.+|+..|+++++++|++..++..++
T Consensus 209 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 288 (365)
T 4eqf_A 209 DMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLG 288 (365)
T ss_dssp SSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHH
Confidence 3 67888999999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHhhcC
Q 023491 120 RLKTQLSLA 128 (281)
Q Consensus 120 ~l~~~l~~~ 128 (281)
.+...++..
T Consensus 289 ~~~~~~g~~ 297 (365)
T 4eqf_A 289 ISCINLGAY 297 (365)
T ss_dssp HHHHHHTCC
T ss_pred HHHHHCCCH
Confidence 888776544
No 65
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.47 E-value=1.6e-12 Score=108.12 Aligned_cols=118 Identities=14% Similarity=0.074 Sum_probs=68.1
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM 82 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~ 82 (281)
+|.++..++..|..++..|++.+|+..|.+++.. .|....+++.+|.+++.+|++++|+..|.+++.++|.+..+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 80 (225)
T 2vq2_A 4 ANQVSNIKTQLAMEYMRGQDYRQATASIEDALKS---DPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINN 80 (225)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh---CccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHH
Confidence 3445555566666666666666666666666655 5555555666666666666666666666666666665555666
Q ss_pred HHHHHHHHc-CCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHH
Q 023491 83 LRAQTLVTL-KEYNSALFDVNRLIE--LNPSSEVYQNLQARLKT 123 (281)
Q Consensus 83 ~lg~a~~~~-g~~~eAl~~~ekAL~--ldP~~~~a~~~l~~l~~ 123 (281)
.+|.++... |++.+|+..|++++. ..|.+..++..++.+..
T Consensus 81 ~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 124 (225)
T 2vq2_A 81 NYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSA 124 (225)
T ss_dssp HHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHH
Confidence 666666666 666666666666655 34444444444444443
No 66
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.47 E-value=8.7e-14 Score=139.51 Aligned_cols=116 Identities=14% Similarity=-0.041 Sum_probs=112.4
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM 82 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~ 82 (281)
+|.++..++.+|.+++..|+|++|+..|.+++.+ +|.+..+++++|.+|+++|+|++ +..|+++++++|++..+|+
T Consensus 463 ~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l---~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~ 538 (681)
T 2pzi_A 463 VGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDT---FPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAF 538 (681)
T ss_dssp HCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH---STTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHH
T ss_pred CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHH
Confidence 5889999999999999999999999999999999 99999999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 023491 83 LRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLK 122 (281)
Q Consensus 83 ~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~ 122 (281)
++|.++..+|++++|+.+|+++++++|++..++.+++.+.
T Consensus 539 ~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~~ 578 (681)
T 2pzi_A 539 GLARARSAEGDRVGAVRTLDEVPPTSRHFTTARLTSAVTL 578 (681)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHHhhcccCcccHHHHHHHHHHH
Confidence 9999999999999999999999999999999998888775
No 67
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.47 E-value=2.2e-12 Score=113.39 Aligned_cols=122 Identities=11% Similarity=0.120 Sum_probs=114.6
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM 82 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~ 82 (281)
+|.++..+...|.+++..|++++|+.+|.+++.. .|....+++++|.+++.+|++++|+..|.+++.+.|.+..+++
T Consensus 168 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 244 (327)
T 3cv0_A 168 NPNDAQLHASLGVLYNLSNNYDSAAANLRRAVEL---RPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMY 244 (327)
T ss_dssp STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHh---CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Confidence 4678899999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCC------------CHHHHHHHHHHHHHhhc
Q 023491 83 LRAQTLVTLKEYNSALFDVNRLIELNPS------------SEVYQNLQARLKTQLSL 127 (281)
Q Consensus 83 ~lg~a~~~~g~~~eAl~~~ekAL~ldP~------------~~~a~~~l~~l~~~l~~ 127 (281)
.+|.++..+|++++|+..|++++.+.|. +..++..++.+...++.
T Consensus 245 ~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 301 (327)
T 3cv0_A 245 NMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNR 301 (327)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999 78888888888776543
No 68
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.47 E-value=2.4e-12 Score=110.07 Aligned_cols=120 Identities=13% Similarity=0.050 Sum_probs=85.3
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hcCCCHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLE--LDYNHTGA 80 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~--i~p~~~~a 80 (281)
+|.++..+...|.+++..|++.+|+.+|.+++.. .|....+++++|.+|+.+|++++|+..|.+++. ..|.+..+
T Consensus 67 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~---~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~ 143 (252)
T 2ho1_A 67 DPSSADAHAALAVVFQTEMEPKLADEEYRKALAS---DSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRV 143 (252)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHH
T ss_pred CCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH---CcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHH
Confidence 3556667777777777777777777777777776 666677777777777777777777777777777 66666677
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 023491 81 LMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQL 125 (281)
Q Consensus 81 ~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l 125 (281)
++.+|.++...|++++|+..|++++.+.|.+..++..++.+...+
T Consensus 144 ~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~ 188 (252)
T 2ho1_A 144 FENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKE 188 (252)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHc
Confidence 777777777777777777777777777777766666666655443
No 69
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.47 E-value=8.4e-13 Score=120.72 Aligned_cols=121 Identities=17% Similarity=0.114 Sum_probs=98.2
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM 82 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~ 82 (281)
+|.++..+...|.+++..|++++|+..|.+++.. +|....+++++|.++.+.|++++|+..|.+++.++|.+..+++
T Consensus 233 ~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~---~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 309 (388)
T 1w3b_A 233 SPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL---QPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLN 309 (388)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT---CSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh---CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHH
Confidence 4677788888888888888888888888888887 7777888888888888888888888888888888888888888
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh
Q 023491 83 LRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLS 126 (281)
Q Consensus 83 ~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~ 126 (281)
.+|.++...|++++|+..|+++++++|++..++..++.+...++
T Consensus 310 ~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g 353 (388)
T 1w3b_A 310 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 353 (388)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcC
Confidence 88888888888888888888888888888777777776655443
No 70
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.46 E-value=3e-12 Score=106.51 Aligned_cols=118 Identities=14% Similarity=0.017 Sum_probs=71.3
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHc-CCHHHHHHHHHHHHH--hcCCCHHH
Q 023491 4 PAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKL-HDFKKAAEECTSVLE--LDYNHTGA 80 (281)
Q Consensus 4 P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~kl-g~y~~Ai~~~~~al~--i~p~~~~a 80 (281)
|.++..+...|.+++..|++.+|+.+|.+++.. .|....+++++|.+++.+ |++++|+..|.+++. ..|....+
T Consensus 39 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~---~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 115 (225)
T 2vq2_A 39 PKNELAWLVRAEIYQYLKVNDKAQESFRQALSI---KPDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIA 115 (225)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHH
T ss_pred ccchHHHHHHHHHHHHcCChHHHHHHHHHHHHh---CCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHH
Confidence 445556666666666666666666666666665 555566666666666666 666666666666665 44444556
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 023491 81 LMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQ 124 (281)
Q Consensus 81 ~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~ 124 (281)
++.+|.++...|++++|+..|++++.+.|.+..++..++.+...
T Consensus 116 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 159 (225)
T 2vq2_A 116 NLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKML 159 (225)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHH
Confidence 66666666666666666666666666666665555555555443
No 71
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.46 E-value=9.5e-13 Score=120.35 Aligned_cols=116 Identities=20% Similarity=0.132 Sum_probs=67.4
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM 82 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~ 82 (281)
+|.++..+..+|..++..|++++|+.+|.+++.+ +|....+++++|.++++.|++++|+..|.+++.++|++..+++
T Consensus 63 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~---~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 139 (388)
T 1w3b_A 63 NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRL---KPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRS 139 (388)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCTHHHH
T ss_pred CCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHc---CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHH
Confidence 3555566666666666666666666666666665 5555555555555555555555555555555555555555555
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 023491 83 LRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARL 121 (281)
Q Consensus 83 ~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l 121 (281)
.+|.++..+|++++|+..|++++.++|++..++..++.+
T Consensus 140 ~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 178 (388)
T 1w3b_A 140 DLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCV 178 (388)
T ss_dssp HHHHHHHTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 555555555555555555555555555555555544444
No 72
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.46 E-value=7.2e-13 Score=116.74 Aligned_cols=120 Identities=14% Similarity=0.147 Sum_probs=89.7
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCC
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKI------KQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYN 76 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~------~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~ 76 (281)
+|.++..+...|.+++..|++.+|+..|.+++...+. .+....+++++|.+++.+|++++|+..|.+++.++|.
T Consensus 189 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 268 (330)
T 3hym_B 189 APEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQ 268 (330)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred CCCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCcc
Confidence 4667777777777777777777777777777776320 1445667777777777778888888888877777777
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 023491 77 HTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLK 122 (281)
Q Consensus 77 ~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~ 122 (281)
+..+++.+|.++..+|++.+|+..|+++++++|++..++..++.+.
T Consensus 269 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 314 (330)
T 3hym_B 269 NASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCI 314 (330)
T ss_dssp CSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCchHHHHHHHHHH
Confidence 7777777888887788888888888888777777777777777655
No 73
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.46 E-value=4.3e-13 Score=115.86 Aligned_cols=117 Identities=12% Similarity=0.008 Sum_probs=69.8
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM 82 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~ 82 (281)
+|.++..++.+|.+++..|+|.+|+..|.+++...........+++++|.+++.+|++++|+..|.+++.++|.+..+++
T Consensus 33 ~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 112 (272)
T 3u4t_A 33 KYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYG 112 (272)
T ss_dssp TCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHH
T ss_pred CCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHH
Confidence 34555556666666666666666666666666531111122445666666666666666666666666666666666666
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 023491 83 LRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQA 119 (281)
Q Consensus 83 ~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~ 119 (281)
.+|.++..+|++++|+..|++++.++|.+..++..++
T Consensus 113 ~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~ 149 (272)
T 3u4t_A 113 QIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELG 149 (272)
T ss_dssp HHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHH
Confidence 6666666666666666666666666666666666555
No 74
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.46 E-value=1.5e-12 Score=116.55 Aligned_cols=122 Identities=14% Similarity=0.091 Sum_probs=108.8
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHH-----------------
Q 023491 4 PAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEE----------------- 66 (281)
Q Consensus 4 P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~----------------- 66 (281)
|.++..++..|..++..|++++|+..|.+++.. +|.+..+++++|.+++.+|++++|+..
T Consensus 114 p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~---~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~ 190 (287)
T 3qou_A 114 PREEELXAQQAMQLMQESNYTDALPLLXDAWQL---SNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLV 190 (287)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---TTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHH
T ss_pred CCchhhHHHHHHHHHhCCCHHHHHHHHHHHHHh---CCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHH
Confidence 567788899999999999999999999999999 999999999999999999999887655
Q ss_pred -----------------HHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHhhc
Q 023491 67 -----------------CTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSS--EVYQNLQARLKTQLSL 127 (281)
Q Consensus 67 -----------------~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~--~~a~~~l~~l~~~l~~ 127 (281)
|.+++..+|+++.+++++|.+|...|++++|+..|+++++++|++ ..++..+..+...++.
T Consensus 191 ~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~ 270 (287)
T 3qou_A 191 AQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGT 270 (287)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCT
T ss_pred HHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCC
Confidence 445577789999999999999999999999999999999999998 8888888888877764
Q ss_pred C
Q 023491 128 A 128 (281)
Q Consensus 128 ~ 128 (281)
.
T Consensus 271 ~ 271 (287)
T 3qou_A 271 G 271 (287)
T ss_dssp T
T ss_pred C
Confidence 4
No 75
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.46 E-value=4.9e-13 Score=128.27 Aligned_cols=117 Identities=15% Similarity=0.057 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHc---------CCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHc--------CCHHHHHHHHHH
Q 023491 7 PANKIERAHQLYRD---------GRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKL--------HDFKKAAEECTS 69 (281)
Q Consensus 7 a~~l~~~G~~~~~~---------gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~kl--------g~y~~Ai~~~~~ 69 (281)
+..+..+|.+++.. |+|++|+.+|.+++.+ +|.+..+++++|.+|+.+ |+|++|+..|.+
T Consensus 170 ~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~---~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~ 246 (474)
T 4abn_A 170 KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM---DVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQ 246 (474)
T ss_dssp HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHH
Confidence 34555555555555 5555555555555555 556666666666666666 666666666666
Q ss_pred HHHhcC---CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh
Q 023491 70 VLELDY---NHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLS 126 (281)
Q Consensus 70 al~i~p---~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~ 126 (281)
++.++| .++.+|+++|.+|..+|++++|+..|+++++++|++..++..++.+...++
T Consensus 247 al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg 306 (474)
T 4abn_A 247 AEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLS 306 (474)
T ss_dssp HHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 666666 666666666666666666666666666666666666666666666655554
No 76
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.46 E-value=5.5e-13 Score=127.90 Aligned_cols=99 Identities=19% Similarity=0.090 Sum_probs=93.6
Q ss_pred CCCCHHHHHHHHHHHHHc--------CCHHHHHHHHHHHHHhhhcCc---ccHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 023491 3 SPAAPANKIERAHQLYRD--------GRYEEALGFYTEALSVAKIKQ---QKIALHSNRAACYLKLHDFKKAAEECTSVL 71 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~--------gdy~eAl~~y~~aL~~~~~~p---~~~~a~~nra~~~~klg~y~~Ai~~~~~al 71 (281)
+|.++..++.+|.+++.. |+|++|+.+|.+++.+ +| ..+.+++++|.+|+.+|+|++|+..|.+++
T Consensus 209 ~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~---~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 285 (474)
T 4abn_A 209 DVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKV---DRKASSNPDLHLNRATLHKYEESYGEALEGFSQAA 285 (474)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH---CGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHh---CCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 588999999999999999 9999999999999999 88 899999999999999999999999999999
Q ss_pred HhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 023491 72 ELDYNHTGALMLRAQTLVTLKEYNSALFDVNRL 104 (281)
Q Consensus 72 ~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekA 104 (281)
+++|++..+++.+|.++..+|++++|+..+.+.
T Consensus 286 ~l~p~~~~a~~~l~~~~~~lg~~~eAi~~~~~~ 318 (474)
T 4abn_A 286 ALDPAWPEPQQREQQLLEFLSRLTSLLESKGKT 318 (474)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HhCCCCHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999887644
No 77
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.45 E-value=2e-12 Score=103.95 Aligned_cols=118 Identities=14% Similarity=0.134 Sum_probs=110.7
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHH
Q 023491 6 APANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRA 85 (281)
Q Consensus 6 ~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg 85 (281)
.+..++..|..++..|++.+|+..|.+++.. .|....+++.+|.+++..|++++|+..|.+++.+.|.+..+++.+|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a 83 (186)
T 3as5_A 7 RQVYYRDKGISHAKAGRYSQAVMLLEQVYDA---DAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLG 83 (186)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTTTCCT---TSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhcCHHHHHHHHHHHHHh---CccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 4567889999999999999999999999998 8889999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh
Q 023491 86 QTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLS 126 (281)
Q Consensus 86 ~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~ 126 (281)
.++...|++.+|+..|++++.+.|.+..+...++.+...++
T Consensus 84 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 124 (186)
T 3as5_A 84 LTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLG 124 (186)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999888887776543
No 78
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.45 E-value=3.3e-12 Score=109.26 Aligned_cols=121 Identities=20% Similarity=0.145 Sum_probs=112.5
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALS--VAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGA 80 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~--~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a 80 (281)
+|.++..+...|.+++..|++.+|+.+|.+++. . .|....+++++|.+++.+|++++|+..|.+++.+.|.+..+
T Consensus 101 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~---~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~ 177 (252)
T 2ho1_A 101 DSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTL---YPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSV 177 (252)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTT---CTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHH
T ss_pred CcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCcc---CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHH
Confidence 467888999999999999999999999999998 5 88889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh
Q 023491 81 LMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLS 126 (281)
Q Consensus 81 ~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~ 126 (281)
++.+|.++..+|++.+|+..|++++.+.|.+..+...+..+...++
T Consensus 178 ~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 223 (252)
T 2ho1_A 178 ALEMADLLYKEREYVPARQYYDLFAQGGGQNARSLLLGIRLAKVFE 223 (252)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHcc
Confidence 9999999999999999999999999999999988888887766543
No 79
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.45 E-value=1.4e-12 Score=115.75 Aligned_cols=112 Identities=20% Similarity=0.287 Sum_probs=106.7
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHH
Q 023491 6 APANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRA 85 (281)
Q Consensus 6 ~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg 85 (281)
+++.++..|..++..|+|.+|+.+|.+++.. +|....+++++|.+++.+|++++|+..|.+++.++|.+..+++.+|
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~---~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~ 78 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDG---DPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRG 78 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh---CcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHH
Confidence 5788999999999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCC---CCHHHHHHHHH
Q 023491 86 QTLVTLKEYNSALFDVNRLIELNP---SSEVYQNLQAR 120 (281)
Q Consensus 86 ~a~~~~g~~~eAl~~~ekAL~ldP---~~~~a~~~l~~ 120 (281)
.++..+|++++|+..|++++.++| .+..+...+..
T Consensus 79 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~ 116 (359)
T 3ieg_A 79 HLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVK 116 (359)
T ss_dssp HHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHH
T ss_pred HHHHHcCChHHHHHHHHHHHhcCCcccChHHHHHHHHH
Confidence 999999999999999999999999 88877776643
No 80
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.45 E-value=6.2e-14 Score=105.27 Aligned_cols=95 Identities=18% Similarity=0.284 Sum_probs=78.9
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCC------HH
Q 023491 6 APANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNH------TG 79 (281)
Q Consensus 6 ~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~------~~ 79 (281)
++..++..|.+++..|+|.+|+..|.+++.+ +|.+..+++++|.|++++|+|++|+..|.+++.++|++ ..
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~---~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ 79 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITA---QPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSK 79 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc---CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHH
Confidence 5677888888888888888888888888888 88888888888888888888888888888888888887 78
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHH
Q 023491 80 ALMLRAQTLVTLKEYNSALFDVNR 103 (281)
Q Consensus 80 a~~~lg~a~~~~g~~~eAl~~~ek 103 (281)
+++++|.++..+|++..|+..|++
T Consensus 80 ~~~~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 80 LQYRLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHHHHHHHHCCCCCSSSSSS
T ss_pred HHHHHHHHHHHHHhHhhhHhHHHH
Confidence 888888888888887777665543
No 81
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.45 E-value=3.5e-12 Score=113.15 Aligned_cols=115 Identities=23% Similarity=0.330 Sum_probs=106.0
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccH----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHH
Q 023491 10 KIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKI----ALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRA 85 (281)
Q Consensus 10 l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~----~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg 85 (281)
.+..|..++..|++.+|+..|.+++.. .|.+. .++..+|.+++++|++++|+..|.+++.++|.++.+++.+|
T Consensus 237 ~~~~a~~~~~~~~~~~A~~~~~~~~~~---~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 313 (359)
T 3ieg_A 237 LIESAEELIRDGRYTDATSKYESVMKT---EPSVAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKDRA 313 (359)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH---CCSSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhc---CCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHHHHH
Confidence 345699999999999999999999998 66654 45778999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhc
Q 023491 86 QTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLSL 127 (281)
Q Consensus 86 ~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~~ 127 (281)
.++..+|++++|+..|+++++++|++..++..+..+...++.
T Consensus 314 ~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~ 355 (359)
T 3ieg_A 314 EAYLIEEMYDEAIQDYEAAQEHNENDQQIREGLEKAQRLLKQ 355 (359)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999887753
No 82
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.45 E-value=1.7e-12 Score=120.20 Aligned_cols=116 Identities=22% Similarity=0.293 Sum_probs=108.3
Q ss_pred CCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHH
Q 023491 2 ASPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGAL 81 (281)
Q Consensus 2 a~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~ 81 (281)
.+|.++..++.+|..++..|+|.+|+.+|.+++.. +|.+..+++++|.+|+.+|++++|+..|.+++.++|.+..++
T Consensus 21 ~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~---~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 97 (450)
T 2y4t_A 21 QSMADVEKHLELGKKLLAAGQLADALSQFHAAVDG---DPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAAR 97 (450)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred ccHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh---CCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 46889999999999999999999999999999998 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HHHHHHHH
Q 023491 82 MLRAQTLVTLKEYNSALFDVNRLIELNPSSE---VYQNLQAR 120 (281)
Q Consensus 82 ~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~---~a~~~l~~ 120 (281)
+.+|.+|..+|++++|+..|++++.++|.+. .++..+..
T Consensus 98 ~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~ 139 (450)
T 2y4t_A 98 LQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIK 139 (450)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHH
Confidence 9999999999999999999999999999988 66655533
No 83
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.44 E-value=2.4e-12 Score=113.30 Aligned_cols=121 Identities=9% Similarity=0.028 Sum_probs=107.0
Q ss_pred CCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHH
Q 023491 3 SPAAPANKIERAHQLYRDG-RYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGAL 81 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~g-dy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~ 81 (281)
+|.++..++..|.+++..| ++.+|+.+|.+++.. .|....+++++|.+++.+|++++|+..|.+++.+.|.+..++
T Consensus 86 ~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~---~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 162 (330)
T 3hym_B 86 YPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTL---EKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPM 162 (330)
T ss_dssp CTTSTHHHHHHHHHHHHSCSCHHHHHHHHHHHHTT---CTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHH
T ss_pred CcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHh---CCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHH
Confidence 5778888899999999999 899999999999988 888888899999999999999999999999999999988899
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh
Q 023491 82 MLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLS 126 (281)
Q Consensus 82 ~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~ 126 (281)
+.+|.++...|++++|+..|++++.++|.+..+...++.+...++
T Consensus 163 ~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~ 207 (330)
T 3hym_B 163 LYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNG 207 (330)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcc
Confidence 999999999999999999999999999999888888887766544
No 84
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.43 E-value=1.4e-12 Score=107.62 Aligned_cols=123 Identities=14% Similarity=0.140 Sum_probs=87.4
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHH-----------------
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAE----------------- 65 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~----------------- 65 (281)
||...+.++.+|..++..|++.+|+..|.+++.. +|.+..+++++|.+++.+|++++|+.
T Consensus 2 ~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~---~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~ 78 (176)
T 2r5s_A 2 NASPDEQLLKQVSELLQQGEHAQALNVIQTLSDE---LQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSL 78 (176)
T ss_dssp ----CTTHHHHHHHHHHTTCHHHHHHHHHTSCHH---HHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH---CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHH
Confidence 3444455666666666667777777666666666 66666666666666666666665554
Q ss_pred -----------------HHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHhh
Q 023491 66 -----------------ECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSS--EVYQNLQARLKTQLS 126 (281)
Q Consensus 66 -----------------~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~--~~a~~~l~~l~~~l~ 126 (281)
.|.+++.++|+++.+++.+|.++...|++++|+..|+++++++|+. ..++..++.+...++
T Consensus 79 ~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g 158 (176)
T 2r5s_A 79 IAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALG 158 (176)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHC
T ss_pred HHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhC
Confidence 4455566678888899999999999999999999999999999875 557888887777665
Q ss_pred cC
Q 023491 127 LA 128 (281)
Q Consensus 127 ~~ 128 (281)
..
T Consensus 159 ~~ 160 (176)
T 2r5s_A 159 QG 160 (176)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 85
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.42 E-value=3.1e-12 Score=110.42 Aligned_cols=118 Identities=15% Similarity=0.136 Sum_probs=110.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHH
Q 023491 7 PANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQ 86 (281)
Q Consensus 7 a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~ 86 (281)
+..+..+|.+++..|++.+|+..|.+++.. +|....+++++|.+|+.+|++++|+..|.+++.++|.++.+++++|.
T Consensus 74 ~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~---~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~ 150 (272)
T 3u4t_A 74 SADFEYYGKILMKKGQDSLAIQQYQAAVDR---DTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQ 150 (272)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---STTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhc---CcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHH
Confidence 566899999999999999999999999999 99999999999999999999999999999999999999999999996
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhc
Q 023491 87 TLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLSL 127 (281)
Q Consensus 87 a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~~ 127 (281)
+.+..+++++|+..|+++++++|.+..+...++.+...+..
T Consensus 151 ~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~ 191 (272)
T 3u4t_A 151 AYYYNKEYVKADSSFVKVLELKPNIYIGYLWRARANAAQDP 191 (272)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCc
Confidence 66666799999999999999999999999999998888754
No 86
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.42 E-value=7e-13 Score=107.51 Aligned_cols=100 Identities=9% Similarity=-0.000 Sum_probs=92.7
Q ss_pred HHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 023491 26 ALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLI 105 (281)
Q Consensus 26 Al~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL 105 (281)
+-..|.+++.+ +|.+..+++++|.+++..|+|.+|+..|.+++.++|.++.+|+++|.++..+|++++|+.+|++++
T Consensus 6 ~~~~~~~al~~---~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 82 (148)
T 2vgx_A 6 GGGTIAMLNEI---SSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGA 82 (148)
T ss_dssp CCCSHHHHTTC---CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhhHHHHHcC---CHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 34568888888 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHhhcC
Q 023491 106 ELNPSSEVYQNLQARLKTQLSLA 128 (281)
Q Consensus 106 ~ldP~~~~a~~~l~~l~~~l~~~ 128 (281)
.++|++..++..++.+...++..
T Consensus 83 ~l~p~~~~~~~~lg~~~~~~g~~ 105 (148)
T 2vgx_A 83 VMDIXEPRFPFHAAECLLQXGEL 105 (148)
T ss_dssp HHSTTCTHHHHHHHHHHHHTTCH
T ss_pred hcCCCCchHHHHHHHHHHHcCCH
Confidence 99999999999999888766543
No 87
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.40 E-value=4.7e-12 Score=108.62 Aligned_cols=122 Identities=8% Similarity=0.019 Sum_probs=103.1
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHH------------------cCCHHHHHHH
Q 023491 5 AAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLK------------------LHDFKKAAEE 66 (281)
Q Consensus 5 ~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~k------------------lg~y~~Ai~~ 66 (281)
....+++.+|.+++..|+|.+|+..|.+++...|.++....+++.+|.+++. +|++++|+..
T Consensus 39 ~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~ 118 (225)
T 2yhc_A 39 YSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSD 118 (225)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHH
Confidence 3467899999999999999999999999999944333344689999999987 5799999999
Q ss_pred HHHHHHhcCCCHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHhh
Q 023491 67 CTSVLELDYNHTGAL-----------------MLRAQTLVTLKEYNSALFDVNRLIELNPSSE---VYQNLQARLKTQLS 126 (281)
Q Consensus 67 ~~~al~i~p~~~~a~-----------------~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~---~a~~~l~~l~~~l~ 126 (281)
|.+++...|++..++ +.+|.+|+..|++.+|+..|+++++..|+++ .++..++.+...++
T Consensus 119 ~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g 198 (225)
T 2yhc_A 119 FSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQ 198 (225)
T ss_dssp HHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcC
Confidence 999999999987544 6889999999999999999999999999987 45666666655543
No 88
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.40 E-value=1.7e-11 Score=110.23 Aligned_cols=125 Identities=14% Similarity=0.078 Sum_probs=94.9
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh--------------------------------------------
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAK-------------------------------------------- 38 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~-------------------------------------------- 38 (281)
+|.++..+...|.+++..|++.+|+..|.+++...+
T Consensus 128 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 207 (368)
T 1fch_A 128 KPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAA 207 (368)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHH
Confidence 355666677777777777777766666666655422
Q ss_pred --cCcc--cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 023491 39 --IKQQ--KIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVY 114 (281)
Q Consensus 39 --~~p~--~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a 114 (281)
..|. .+.+++++|.+|+..|++++|+..|.+++.++|.++.+++.+|.++..+|++.+|+..|++++.++|.+..+
T Consensus 208 ~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 287 (368)
T 1fch_A 208 VRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRS 287 (368)
T ss_dssp HHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHH
Confidence 1233 577788888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHHHhhc
Q 023491 115 QNLQARLKTQLSL 127 (281)
Q Consensus 115 ~~~l~~l~~~l~~ 127 (281)
+..++.+...++.
T Consensus 288 ~~~l~~~~~~~g~ 300 (368)
T 1fch_A 288 RYNLGISCINLGA 300 (368)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHCCC
Confidence 8888777766543
No 89
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.40 E-value=5.4e-12 Score=96.48 Aligned_cols=95 Identities=13% Similarity=0.031 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 023491 25 EALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRL 104 (281)
Q Consensus 25 eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekA 104 (281)
.|+..|.+++.. +|.+..+++++|.+|+.+|+|++|+..|.+++.++|.+..+|+++|.++..+|++.+|+..|+++
T Consensus 3 ~a~~~~~~al~~---~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~a 79 (115)
T 2kat_A 3 AITERLEAMLAQ---GTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESG 79 (115)
T ss_dssp CHHHHHHHHHTT---TCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh---CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 578999999998 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCC--CHHHHHHHHHHH
Q 023491 105 IELNPS--SEVYQNLQARLK 122 (281)
Q Consensus 105 L~ldP~--~~~a~~~l~~l~ 122 (281)
+.+.|. +......+..+.
T Consensus 80 l~~~~~~~~~~~~~~l~~~l 99 (115)
T 2kat_A 80 LAAAQSRGDQQVVKELQVFL 99 (115)
T ss_dssp HHHHHHHTCHHHHHHHHHHH
T ss_pred HHhccccccHHHHHHHHHHH
Confidence 999884 344434333333
No 90
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.39 E-value=9.7e-12 Score=115.05 Aligned_cols=113 Identities=24% Similarity=0.361 Sum_probs=105.1
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhhhcCccc----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHH
Q 023491 11 IERAHQLYRDGRYEEALGFYTEALSVAKIKQQK----IALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQ 86 (281)
Q Consensus 11 ~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~----~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~ 86 (281)
+..|..++..|++.+|+.+|.+++.. .|.+ ..+++++|.++.++|++++|+..|.+++.++|+++.+|+.+|.
T Consensus 261 ~~~~~~~~~~g~~~~A~~~~~~~l~~---~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 337 (450)
T 2y4t_A 261 IESAEELIRDGRYTDATSKYESVMKT---EPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAE 337 (450)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHH---CCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhc---CCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 34499999999999999999999998 6665 4589999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh
Q 023491 87 TLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLS 126 (281)
Q Consensus 87 a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~ 126 (281)
++..+|++++|+..|+++++++|++..++..++.+...++
T Consensus 338 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 377 (450)
T 2y4t_A 338 AYLIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQRLLK 377 (450)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999998877654
No 91
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.38 E-value=1.6e-11 Score=110.43 Aligned_cols=121 Identities=8% Similarity=-0.092 Sum_probs=100.7
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHH--HHHHHcCCHHHHHHHHHHHHHhcCCCHHHH
Q 023491 4 PAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRA--ACYLKLHDFKKAAEECTSVLELDYNHTGAL 81 (281)
Q Consensus 4 P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra--~~~~klg~y~~Ai~~~~~al~i~p~~~~a~ 81 (281)
|.++..+..+|.++...|++++|+..|.+++.. +|....+.+..| .++...|++++|+..|.+++...|.++.+|
T Consensus 127 ~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~---~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~ 203 (291)
T 3mkr_A 127 GDSLECMAMTVQILLKLDRLDLARKELKKMQDQ---DEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLL 203 (291)
T ss_dssp CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhh---CcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHH
Confidence 567888888999999999999999999999988 776654433333 222334889999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhc
Q 023491 82 MLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLSL 127 (281)
Q Consensus 82 ~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~~ 127 (281)
+++|.++..+|++++|+..|++++.++|+++.++.+++.+...++.
T Consensus 204 ~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~ 249 (291)
T 3mkr_A 204 NGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGK 249 (291)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999988877766543
No 92
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.36 E-value=3.6e-12 Score=101.63 Aligned_cols=98 Identities=11% Similarity=0.012 Sum_probs=88.5
Q ss_pred HHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 28 GFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIEL 107 (281)
Q Consensus 28 ~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~l 107 (281)
..|.+++.+ +|.+..+++++|.++++.|+|++|+..|.+++.++|.++.+|+.+|.++..+|++++|+.+|++++.+
T Consensus 5 ~~l~~al~~---~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 81 (142)
T 2xcb_A 5 GTLAMLRGL---SEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALM 81 (142)
T ss_dssp ----CCTTC---CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhHHHHHcC---CHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 457777777 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhhcC
Q 023491 108 NPSSEVYQNLQARLKTQLSLA 128 (281)
Q Consensus 108 dP~~~~a~~~l~~l~~~l~~~ 128 (281)
+|+++.++..++.+...++..
T Consensus 82 ~p~~~~~~~~lg~~~~~~g~~ 102 (142)
T 2xcb_A 82 DINEPRFPFHAAECHLQLGDL 102 (142)
T ss_dssp CTTCTHHHHHHHHHHHHTTCH
T ss_pred CCCCcHHHHHHHHHHHHcCCH
Confidence 999999999999888776543
No 93
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.36 E-value=3.1e-12 Score=104.69 Aligned_cols=110 Identities=13% Similarity=0.076 Sum_probs=98.1
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHH-HHHcC
Q 023491 14 AHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQT-LVTLK 92 (281)
Q Consensus 14 G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a-~~~~g 92 (281)
+..++..|+|++|+..|.+++.. +|.+..+++.+|.+|+.+|+|++|+..|.+++.++|.++.+++.+|.+ +...|
T Consensus 17 ~~~~~~~~~~~~A~~~~~~al~~---~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~ 93 (177)
T 2e2e_A 17 LHQFASQQNPEAQLQALQDKIRA---NPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQAS 93 (177)
T ss_dssp TCCCC-----CCCCHHHHHHHHH---CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTT
T ss_pred hhhhhhccCHHHHHHHHHHHHHh---CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcC
Confidence 44567789999999999999999 999999999999999999999999999999999999999999999999 88999
Q ss_pred CH--HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh
Q 023491 93 EY--NSALFDVNRLIELNPSSEVYQNLQARLKTQLS 126 (281)
Q Consensus 93 ~~--~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~ 126 (281)
++ .+|+..|++++.++|.+..++..++.+...++
T Consensus 94 ~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g 129 (177)
T 2e2e_A 94 QHMTAQTRAMIDKALALDSNEITALMLLASDAFMQA 129 (177)
T ss_dssp TCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred CcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcc
Confidence 99 99999999999999999999999888876653
No 94
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.36 E-value=2e-11 Score=109.67 Aligned_cols=115 Identities=15% Similarity=0.141 Sum_probs=99.0
Q ss_pred CCCHHHHHHHH--HHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHH
Q 023491 4 PAAPANKIERA--HQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGAL 81 (281)
Q Consensus 4 P~~a~~l~~~G--~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~ 81 (281)
|.+....+..| ..+...|++++|+.+|.+++.. .|.++.+++++|.+++++|++++|+..|.+++.++|+++.++
T Consensus 161 p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~---~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l 237 (291)
T 3mkr_A 161 EDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADK---CSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETL 237 (291)
T ss_dssp TTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHH---SCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred cCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHh---CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 55543333333 3333458999999999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHH-HHHHHHHHHHhCCCCHHHHHHHHHH
Q 023491 82 MLRAQTLVTLKEYNS-ALFDVNRLIELNPSSEVYQNLQARL 121 (281)
Q Consensus 82 ~~lg~a~~~~g~~~e-Al~~~ekAL~ldP~~~~a~~~l~~l 121 (281)
+++|.++..+|++.+ |..+++++++++|+++.+.....+.
T Consensus 238 ~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~~~~~d~~~~~ 278 (291)
T 3mkr_A 238 INLVVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEYRAKE 278 (291)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 999999999999976 5688899999999999888765543
No 95
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.36 E-value=1.1e-11 Score=116.08 Aligned_cols=103 Identities=28% Similarity=0.460 Sum_probs=98.5
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHH
Q 023491 6 APANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRA 85 (281)
Q Consensus 6 ~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg 85 (281)
.+..++.+|..++..|+|.+|+..|++++.. +| +..+++++|.|++++|+|++|+..|.++++++|.+..+++.+|
T Consensus 5 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~---~p-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 80 (514)
T 2gw1_A 5 YALALKDKGNQFFRNKKYDDAIKYYNWALEL---KE-DPVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRA 80 (514)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH---CC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhccHHHHHHHHHHHHhc---Cc-cHHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHHH
Confidence 5788999999999999999999999999998 77 6899999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 023491 86 QTLVTLKEYNSALFDVNRLIELNPSSE 112 (281)
Q Consensus 86 ~a~~~~g~~~eAl~~~ekAL~ldP~~~ 112 (281)
.++..+|++++|+..|++++.++|.+.
T Consensus 81 ~~~~~~g~~~~A~~~~~~~~~~~~~~~ 107 (514)
T 2gw1_A 81 SANEGLGKFADAMFDLSVLSLNGDFND 107 (514)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHSSSCCG
T ss_pred HHHHHHhhHHHHHHHHHHHHhcCCCcc
Confidence 999999999999999999999998653
No 96
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.36 E-value=4e-12 Score=108.96 Aligned_cols=124 Identities=20% Similarity=0.164 Sum_probs=109.9
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh-----hcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----
Q 023491 4 PAAPANKIERAHQLYRDGRYEEALGFYTEALSVA-----KIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLEL----- 73 (281)
Q Consensus 4 P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~-----~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i----- 73 (281)
|..+..+..+|.+++..|+|.+|+.+|.+++.+. ...+....+++++|.+|+.+|++++|+..|.+++.+
T Consensus 40 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 119 (283)
T 3edt_B 40 PDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVL 119 (283)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHc
Confidence 5567889999999999999999999999999885 335778899999999999999999999999999998
Q ss_pred ---cCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHhhc
Q 023491 74 ---DYNHTGALMLRAQTLVTLKEYNSALFDVNRLIEL--------NPSSEVYQNLQARLKTQLSL 127 (281)
Q Consensus 74 ---~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~l--------dP~~~~a~~~l~~l~~~l~~ 127 (281)
+|....+++++|.++..+|++++|+..|++++.+ .|....+...++.+...++.
T Consensus 120 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 184 (283)
T 3edt_B 120 GKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGK 184 (283)
T ss_dssp CTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTC
T ss_pred CCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCC
Confidence 4667789999999999999999999999999999 66667777788877766544
No 97
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.36 E-value=1e-11 Score=89.81 Aligned_cols=81 Identities=22% Similarity=0.259 Sum_probs=53.0
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 023491 43 KIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLK 122 (281)
Q Consensus 43 ~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~ 122 (281)
...+++++|.+++..|+|++|+..|.+++.++|.+..+++++|.++..+|++++|+..|++++.++|.+..++..++.+.
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 87 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAK 87 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 45556666666666666666666666666666666666666666666666666666666666666666666666666554
Q ss_pred H
Q 023491 123 T 123 (281)
Q Consensus 123 ~ 123 (281)
.
T Consensus 88 ~ 88 (91)
T 1na3_A 88 Q 88 (91)
T ss_dssp H
T ss_pred H
Confidence 4
No 98
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.35 E-value=2.3e-11 Score=104.61 Aligned_cols=108 Identities=17% Similarity=0.104 Sum_probs=97.7
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCH----
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHT---- 78 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~---- 78 (281)
+|.++..+...|.+++..|+|.+|+.+|.+++.+ .|....+++++|.+|+.+|++++|+..|.+++.++|.+.
T Consensus 73 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~---~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 149 (275)
T 1xnf_A 73 RPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLEL---DPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSL 149 (275)
T ss_dssp CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhc---CccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHH
Confidence 5788999999999999999999999999999999 888899999999999999999999999999999988764
Q ss_pred ------------------------------------------------------------------HHHHHHHHHHHHcC
Q 023491 79 ------------------------------------------------------------------GALMLRAQTLVTLK 92 (281)
Q Consensus 79 ------------------------------------------------------------------~a~~~lg~a~~~~g 92 (281)
.+++.+|.++..+|
T Consensus 150 ~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g 229 (275)
T 1xnf_A 150 WLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLG 229 (275)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcC
Confidence 56778888888888
Q ss_pred CHHHHHHHHHHHHHhCCCCHH
Q 023491 93 EYNSALFDVNRLIELNPSSEV 113 (281)
Q Consensus 93 ~~~eAl~~~ekAL~ldP~~~~ 113 (281)
++++|+..|++++.++|.+..
T Consensus 230 ~~~~A~~~~~~al~~~p~~~~ 250 (275)
T 1xnf_A 230 DLDSATALFKLAVANNVHNFV 250 (275)
T ss_dssp CHHHHHHHHHHHHTTCCTTCH
T ss_pred CHHHHHHHHHHHHhCCchhHH
Confidence 999999999988888886543
No 99
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.35 E-value=2.6e-11 Score=116.47 Aligned_cols=119 Identities=18% Similarity=0.174 Sum_probs=88.5
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc---Cccc-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKI---KQQK-IALHSNRAACYLKLHDFKKAAEECTSVLELDYNHT 78 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~---~p~~-~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~ 78 (281)
.|.++..+...|..+++.|++++|+.+|.+++...+. +|.. ..+++++|.+|++.|++++|+..|.+++.++|.+.
T Consensus 471 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~ 550 (597)
T 2xpi_A 471 FQYDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDA 550 (597)
T ss_dssp CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCH
T ss_pred CCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCh
Confidence 3556777777777777777777777777777776432 3433 66777777777778888888888877777777777
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 023491 79 GALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARL 121 (281)
Q Consensus 79 ~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l 121 (281)
.+|+.+|.+|...|++++|+..|+++++++|++..++.+++.+
T Consensus 551 ~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~ 593 (597)
T 2xpi_A 551 NVHTAIALVYLHKKIPGLAITHLHESLAISPNEIMASDLLKRA 593 (597)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Confidence 7777788888888888888888888888887777777766654
No 100
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.34 E-value=2.2e-11 Score=97.07 Aligned_cols=102 Identities=22% Similarity=0.247 Sum_probs=93.5
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM 82 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~ 82 (281)
+|.++..+...|.+++..|+|.+|+..|.+++.+ .|....+++++|.+++.+|++++|+..|.+++.++|.+..++.
T Consensus 43 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~---~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~ 119 (166)
T 1a17_A 43 NPSNAIYYGNRSLAYLRTECYGYALGDATRAIEL---DKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKM 119 (166)
T ss_dssp STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred CCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHH
Confidence 5778999999999999999999999999999999 8999999999999999999999999999999999999999885
Q ss_pred HH--HHHHHHcCCHHHHHHHHHHHHHh
Q 023491 83 LR--AQTLVTLKEYNSALFDVNRLIEL 107 (281)
Q Consensus 83 ~l--g~a~~~~g~~~eAl~~~ekAL~l 107 (281)
.+ +.++...|++++|+..+.++..+
T Consensus 120 ~~~~~~~~~~~~~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 120 KYQECNKIVKQKAFERAIAGDEHKRSV 146 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcccchHHH
Confidence 55 44588899999999999877654
No 101
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.33 E-value=1.7e-11 Score=119.16 Aligned_cols=108 Identities=11% Similarity=-0.007 Sum_probs=104.3
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM 82 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~ 82 (281)
+|.++..+..+|.+++..|+|++|+.+|.+++.+ +|.+..+++++|.+|+++|++++|+..|.++++++|.+..+++
T Consensus 53 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~---~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 129 (568)
T 2vsy_A 53 HPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDA---APEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITA 129 (568)
T ss_dssp STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc---CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 6889999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHc---CCHHHHHHHHHHHHHhCCCCHH
Q 023491 83 LRAQTLVTL---KEYNSALFDVNRLIELNPSSEV 113 (281)
Q Consensus 83 ~lg~a~~~~---g~~~eAl~~~ekAL~ldP~~~~ 113 (281)
++|.++..+ |++++|+..|+++++++|.+..
T Consensus 130 ~l~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 163 (568)
T 2vsy_A 130 QLLNWRRRLCDWRALDVLSAQVRAAVAQGVGAVE 163 (568)
T ss_dssp HHHHHHHHTTCCTTHHHHHHHHHHHHHHTCCCSC
T ss_pred HHHHHHHHhhccccHHHHHHHHHHHHhcCCcccC
Confidence 999999999 9999999999999999998643
No 102
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.33 E-value=4.3e-11 Score=111.79 Aligned_cols=124 Identities=13% Similarity=0.008 Sum_probs=106.2
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh------cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc----
Q 023491 5 AAPANKIERAHQLYRDGRYEEALGFYTEALSVAK------IKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELD---- 74 (281)
Q Consensus 5 ~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~------~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~---- 74 (281)
..+..+..+|.+++..|+|++|+.+|.+|+.+.+ .++..+.+|.|+|.+|+.+|+|++|+.+|.+++.+.
T Consensus 49 ~~a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~ 128 (472)
T 4g1t_A 49 FKATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFS 128 (472)
T ss_dssp -CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcc
Confidence 3456677899999999999999999999998754 356778899999999999999999999999999874
Q ss_pred ----CCCHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcC
Q 023491 75 ----YNHTGALMLRAQTLVTLK--EYNSALFDVNRLIELNPSSEVYQNLQARLKTQLSLA 128 (281)
Q Consensus 75 ----p~~~~a~~~lg~a~~~~g--~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~~~ 128 (281)
+..+.++.++|.++..+| +|++|+.+|+++++++|+++.+...++.+...+...
T Consensus 129 ~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~ 188 (472)
T 4g1t_A 129 SPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNW 188 (472)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHS
T ss_pred cccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCc
Confidence 356789999998887764 699999999999999999999998888776655433
No 103
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.32 E-value=2.4e-11 Score=94.05 Aligned_cols=87 Identities=18% Similarity=0.169 Sum_probs=81.5
Q ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 023491 42 QKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARL 121 (281)
Q Consensus 42 ~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l 121 (281)
..+..++++|.++++.|+|++|+..|.+++.++|.++.+|+++|.++..+|++.+|+.+|++++.++|++..++..++.+
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATA 81 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHhhcC
Q 023491 122 KTQLSLA 128 (281)
Q Consensus 122 ~~~l~~~ 128 (281)
...++..
T Consensus 82 ~~~~~~~ 88 (126)
T 3upv_A 82 QIAVKEY 88 (126)
T ss_dssp HHHTTCH
T ss_pred HHHHhCH
Confidence 8776543
No 104
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.31 E-value=2.2e-11 Score=115.03 Aligned_cols=119 Identities=18% Similarity=0.186 Sum_probs=101.3
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHH
Q 023491 4 PAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALML 83 (281)
Q Consensus 4 P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~ 83 (281)
|. +..++..|.+++..|++.+|+.+|.+++.. .|....+++++|.+++.+|++++|+..|.+++.++|.+..+++.
T Consensus 274 ~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 349 (537)
T 3fp2_A 274 PT-PNSYIFLALTLADKENSQEFFKFFQKAVDL---NPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQ 349 (537)
T ss_dssp CC-HHHHHHHHHHTCCSSCCHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHH
T ss_pred CC-chHHHHHHHHHHHhcCHHHHHHHHHHHhcc---CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 44 677778888888888888888888888887 88888888889999999999999999999998888888888888
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh
Q 023491 84 RAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLS 126 (281)
Q Consensus 84 lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~ 126 (281)
+|.++..+|++++|+..|++++.++|.+..++..++.+...++
T Consensus 350 la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 392 (537)
T 3fp2_A 350 LACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRG 392 (537)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhC
Confidence 9999999999999999999999998888888888877766553
No 105
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.31 E-value=1.4e-11 Score=108.25 Aligned_cols=111 Identities=12% Similarity=0.017 Sum_probs=101.5
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHH
Q 023491 5 AAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLR 84 (281)
Q Consensus 5 ~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~l 84 (281)
.++..++.+|..++..|+|.+|+.+|.+++.. .|....+++.+|.+++.+|++++|+..|.+++.++|.+..+++.+
T Consensus 19 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l 95 (327)
T 3cv0_A 19 MYHENPMEEGLSMLKLANLAEAALAFEAVCQA---APEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAAL 95 (327)
T ss_dssp GGSSCHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhccHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHH
Confidence 35567889999999999999999999999998 899999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 023491 85 AQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQ 118 (281)
Q Consensus 85 g~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l 118 (281)
|.++..+|++.+|+..|++++.++|.+..+...+
T Consensus 96 a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 129 (327)
T 3cv0_A 96 AVSHTNEHNANAALASLRAWLLSQPQYEQLGSVN 129 (327)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTSTTTTTC----
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHH
Confidence 9999999999999999999999999876554443
No 106
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.31 E-value=4.4e-11 Score=86.39 Aligned_cols=87 Identities=23% Similarity=0.320 Sum_probs=81.8
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM 82 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~ 82 (281)
.+.++..++..|..++..|+|.+|+.+|.+++.. .|....+++++|.+++++|++++|+..|.+++.++|.+..+++
T Consensus 5 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~---~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~ 81 (91)
T 1na3_A 5 PGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALEL---DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQ 81 (91)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred ccccHHHHHHHHHHHHHccCHHHHHHHHHHHHhc---CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHH
Confidence 3457889999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcC
Q 023491 83 LRAQTLVTLK 92 (281)
Q Consensus 83 ~lg~a~~~~g 92 (281)
++|.++..+|
T Consensus 82 ~l~~~~~~~g 91 (91)
T 1na3_A 82 NLGNAKQKQG 91 (91)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhcC
Confidence 9999998765
No 107
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.30 E-value=3e-11 Score=107.82 Aligned_cols=107 Identities=13% Similarity=0.058 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCc---ccHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhcCCC-----
Q 023491 7 PANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQ---QKIALHSNRAACYLKL-HDFKKAAEECTSVLELDYNH----- 77 (281)
Q Consensus 7 a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p---~~~~a~~nra~~~~kl-g~y~~Ai~~~~~al~i~p~~----- 77 (281)
+..+.+.|.++...|+|++|+.+|.+++.+.+... ..+.++.++|.+|... |++++|+..|.+++.+.|..
T Consensus 77 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~ 156 (292)
T 1qqe_A 77 GNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVAL 156 (292)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHH
Confidence 67888999999999999999999999999854211 1267899999999995 99999999999999998754
Q ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 023491 78 -TGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEV 113 (281)
Q Consensus 78 -~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~ 113 (281)
..++.++|.++..+|+|.+|+..|++++.+.|.+..
T Consensus 157 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 193 (292)
T 1qqe_A 157 SNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRL 193 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTT
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCc
Confidence 568999999999999999999999999999987653
No 108
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.30 E-value=4e-11 Score=89.67 Aligned_cols=87 Identities=10% Similarity=0.121 Sum_probs=80.4
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHH
Q 023491 43 KIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSS------EVYQN 116 (281)
Q Consensus 43 ~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~------~~a~~ 116 (281)
.+.+++++|.+++..|+|++|+..|.+++.++|.++.+++++|.++..+|++++|+..|++++.++|++ ..+..
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 82 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQY 82 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence 457789999999999999999999999999999999999999999999999999999999999999998 88888
Q ss_pred HHHHHHHHhhcCC
Q 023491 117 LQARLKTQLSLAP 129 (281)
Q Consensus 117 ~l~~l~~~l~~~~ 129 (281)
.++.+...++...
T Consensus 83 ~~~~~~~~~~~~~ 95 (111)
T 2l6j_A 83 RLELAQGAVGSVQ 95 (111)
T ss_dssp HHHHHHHHHHCCC
T ss_pred HHHHHHHHHHhHh
Confidence 8888887777443
No 109
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.30 E-value=6.5e-12 Score=99.01 Aligned_cols=71 Identities=15% Similarity=0.185 Sum_probs=67.3
Q ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 023491 42 QKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSE 112 (281)
Q Consensus 42 ~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~ 112 (281)
..+.++.++|.++++.|+|++|+..|.++|+++|.++.+|+++|.+|+.+|+|++|+.+|+++|+++|.+.
T Consensus 6 d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~ 76 (127)
T 4gcn_A 6 DAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETR 76 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccc
Confidence 45677899999999999999999999999999999999999999999999999999999999999998764
No 110
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.28 E-value=3.5e-11 Score=112.53 Aligned_cols=118 Identities=19% Similarity=0.151 Sum_probs=99.5
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCccc------HHHHHHHHHHHHH---cCCHHHHHHHHHHHHHh
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQK------IALHSNRAACYLK---LHDFKKAAEECTSVLEL 73 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~------~~a~~nra~~~~k---lg~y~~Ai~~~~~al~i 73 (281)
.|.++..+...|.+++..|++++|+..|.+++.. .|.. ..+++++|.+++. +|++++|+..|.+++.+
T Consensus 368 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~ 444 (514)
T 2gw1_A 368 FPEAPEVPNFFAEILTDKNDFDKALKQYDLAIEL---ENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKL 444 (514)
T ss_dssp STTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---HHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh---hhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHh
Confidence 4667778888899999999999999999998888 4443 3488889999998 89999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 023491 74 DYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKT 123 (281)
Q Consensus 74 ~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~ 123 (281)
+|.+..+++.+|.++..+|++.+|+..|++++.++|++..++..+..+..
T Consensus 445 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~ 494 (514)
T 2gw1_A 445 DPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAEA 494 (514)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988888776655544
No 111
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.28 E-value=4.6e-11 Score=109.51 Aligned_cols=97 Identities=19% Similarity=0.132 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHH
Q 023491 7 PANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQ 86 (281)
Q Consensus 7 a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~ 86 (281)
+..+..+|.+++..|+|.+|+.+|.++|.+ +|.+..+++++|.+|+.+|+|++|+.+|.++++++|.+..+++++|.
T Consensus 196 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~---~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~ 272 (336)
T 1p5q_A 196 LASHLNLAMCHLKLQAFSAAIESCNKALEL---DSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAV 272 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
Confidence 689999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHH-HHHHHHHHH
Q 023491 87 TLVTLKEYNSA-LFDVNRLIE 106 (281)
Q Consensus 87 a~~~~g~~~eA-l~~~ekAL~ 106 (281)
++..+|++.+| ...|++++.
T Consensus 273 ~~~~~~~~~~a~~~~~~~~~~ 293 (336)
T 1p5q_A 273 CQQRIRRQLAREKKLYANMFE 293 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 456666553
No 112
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.27 E-value=1.2e-10 Score=111.79 Aligned_cols=121 Identities=11% Similarity=-0.006 Sum_probs=111.2
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM 82 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~ 82 (281)
.|.++..+...|..+++.|++++|+.+|.+++.. .|.+..+++.+|.+|.+.|++++|+..|.+++.+.|.+..+|+
T Consensus 369 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~---~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~ 445 (597)
T 2xpi_A 369 HPEKAVTWLAVGIYYLCVNKISEARRYFSKSSTM---DPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYL 445 (597)
T ss_dssp CTTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHH
T ss_pred CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHH
Confidence 4678889999999999999999999999999998 8889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh
Q 023491 83 LRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLS 126 (281)
Q Consensus 83 ~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~ 126 (281)
.+|.+|...|++++|+..|++++.+.|.+..++..++.+....+
T Consensus 446 ~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 489 (597)
T 2xpi_A 446 FLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKS 489 (597)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999988888887766543
No 113
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.27 E-value=9e-12 Score=92.39 Aligned_cols=90 Identities=21% Similarity=0.155 Sum_probs=59.1
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 023491 11 IERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIA-LHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLV 89 (281)
Q Consensus 11 ~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~-a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~ 89 (281)
+.+|..++..|+|.+|+..|.+++.. +|.+.. +++++|.+|+.+|++++|+..|.+++.++|++..++++
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~---~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~------ 74 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQT---EPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR------ 74 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHH---CSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH------
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHH---CCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH------
Confidence 45666666677777777777777666 666666 66677777777777777777777777777666666543
Q ss_pred HcCCHHHHHHHHHHHHHhCCCC
Q 023491 90 TLKEYNSALFDVNRLIELNPSS 111 (281)
Q Consensus 90 ~~g~~~eAl~~~ekAL~ldP~~ 111 (281)
+.+.+|+..|++++.++|++
T Consensus 75 --~~~~~a~~~~~~~~~~~p~~ 94 (99)
T 2kc7_A 75 --KMVMDILNFYNKDMYNQLEH 94 (99)
T ss_dssp --HHHHHHHHHHCCTTHHHHCC
T ss_pred --HHHHHHHHHHHHHhccCccc
Confidence 45566666666666665543
No 114
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.26 E-value=8.1e-11 Score=95.46 Aligned_cols=88 Identities=11% Similarity=0.032 Sum_probs=82.8
Q ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 023491 40 KQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQA 119 (281)
Q Consensus 40 ~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~ 119 (281)
.+..+.+++.+|.++++.|+|++|+..|.+++.++|.++.+|+++|.+|+.+|+|.+|+.+|++++.++|++..++.+++
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 86 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLG 86 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhc
Q 023491 120 RLKTQLSL 127 (281)
Q Consensus 120 ~l~~~l~~ 127 (281)
.+...++.
T Consensus 87 ~~~~~~g~ 94 (164)
T 3sz7_A 87 LARFDMAD 94 (164)
T ss_dssp HHHHHTTC
T ss_pred HHHHHccC
Confidence 88877653
No 115
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.25 E-value=5.6e-11 Score=89.58 Aligned_cols=71 Identities=15% Similarity=0.073 Sum_probs=62.7
Q ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 023491 40 KQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPS 110 (281)
Q Consensus 40 ~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~ 110 (281)
+|.++.+++++|.+|+.+|+|++|+..|.++++++|.++.+|+++|.+|..+|++++|+..|++++.+.|.
T Consensus 3 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~ 73 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVARE 73 (100)
T ss_dssp --CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhc
Confidence 67888899999999999999999999999999999999999999999999999999999999999988764
No 116
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.25 E-value=4.2e-11 Score=106.88 Aligned_cols=109 Identities=12% Similarity=0.030 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhhhcCcc---cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHH---
Q 023491 7 PANKIERAHQLYRD-GRYEEALGFYTEALSVAKIKQQ---KIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTG--- 79 (281)
Q Consensus 7 a~~l~~~G~~~~~~-gdy~eAl~~y~~aL~~~~~~p~---~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~--- 79 (281)
+..+...|.++... |+|++|+.+|.+++.+.+.... ...++.++|.+|+++|+|++|+..|.+++.+.|.+..
T Consensus 117 a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 196 (292)
T 1qqe_A 117 ANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQW 196 (292)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGG
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccH
Confidence 56788999999996 9999999999999998542211 2567999999999999999999999999999987543
Q ss_pred ----HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 023491 80 ----ALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQ 115 (281)
Q Consensus 80 ----a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~ 115 (281)
+|+++|.++..+|++.+|+.+|++++.++|......
T Consensus 197 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~ 236 (292)
T 1qqe_A 197 SLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSR 236 (292)
T ss_dssp GHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC--------
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCcH
Confidence 689999999999999999999999999999876543
No 117
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.24 E-value=4e-11 Score=102.67 Aligned_cols=104 Identities=18% Similarity=0.122 Sum_probs=95.5
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh-----cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----
Q 023491 4 PAAPANKIERAHQLYRDGRYEEALGFYTEALSVAK-----IKQQKIALHSNRAACYLKLHDFKKAAEECTSVLEL----- 73 (281)
Q Consensus 4 P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~-----~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i----- 73 (281)
|..+..+...|.+++..|+|++|+.+|.+++.+.. .++....+++++|.+|+.+|++++|+..|.+++.+
T Consensus 82 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 161 (283)
T 3edt_B 82 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRL 161 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhc
Confidence 45677889999999999999999999999999852 24778999999999999999999999999999999
Q ss_pred ---cCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 74 ---DYNHTGALMLRAQTLVTLKEYNSALFDVNRLIEL 107 (281)
Q Consensus 74 ---~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~l 107 (281)
.|....+++++|.++..+|++++|+..|++++.+
T Consensus 162 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 162 GPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTR 198 (283)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 6667889999999999999999999999999997
No 118
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.24 E-value=1.3e-10 Score=104.12 Aligned_cols=119 Identities=9% Similarity=-0.063 Sum_probs=103.0
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIA-LHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGAL 81 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~-a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~ 81 (281)
+|.++..+...|..+...|++++|+..|.+++.+ .|.+.. +|.++|.++.+.|++++|+..|.+++++.|.+..+|
T Consensus 95 ~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~---~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 171 (308)
T 2ond_A 95 LKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAI---EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVY 171 (308)
T ss_dssp TTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS---SSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHH
T ss_pred CcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc---cccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHH
Confidence 6888999999999999999999999999999998 777775 899999999999999999999999999999888887
Q ss_pred HHHHHHHHH-cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 023491 82 MLRAQTLVT-LKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQ 124 (281)
Q Consensus 82 ~~lg~a~~~-~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~ 124 (281)
+..|.+.+. .|++..|+..|+++++++|++..++..++.+...
T Consensus 172 ~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~ 215 (308)
T 2ond_A 172 VTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSH 215 (308)
T ss_dssp HHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 766666443 6999999999999999999988888777766544
No 119
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.23 E-value=1.2e-10 Score=110.00 Aligned_cols=116 Identities=13% Similarity=0.035 Sum_probs=108.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHH
Q 023491 7 PANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQ 86 (281)
Q Consensus 7 a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~ 86 (281)
+..+...|..++..|++.+|+..|.+++.. +|. ..+++.+|.+++..|++++|+..|.+++.++|.++.+++.+|.
T Consensus 243 ~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~---~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 318 (537)
T 3fp2_A 243 ALALCYTGIFHFLKNNLLDAQVLLQESINL---HPT-PNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQ 318 (537)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CCC-HHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHhc---CCC-chHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHH
Confidence 346888999999999999999999999998 887 8999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh
Q 023491 87 TLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLS 126 (281)
Q Consensus 87 a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~ 126 (281)
++...|++.+|+..|++++.++|.+..++..++.+...++
T Consensus 319 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g 358 (537)
T 3fp2_A 319 MYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQG 358 (537)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTT
T ss_pred HHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999888888876554
No 120
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.23 E-value=4.7e-10 Score=97.70 Aligned_cols=114 Identities=14% Similarity=0.159 Sum_probs=85.8
Q ss_pred CCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhcCCC
Q 023491 2 ASPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLK----LHDFKKAAEECTSVLELDYNH 77 (281)
Q Consensus 2 a~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~k----lg~y~~Ai~~~~~al~i~p~~ 77 (281)
++|.++.+++..|..++..|++.+|+.+|.+++.. ....+++++|.+|+. .+++++|+..|.+++.++ +
T Consensus 1 a~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~-----~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~ 73 (273)
T 1ouv_A 1 MAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDL-----KENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--Y 73 (273)
T ss_dssp ----CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--C
T ss_pred CCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHHC-----CCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--C
Confidence 45778888888888888888888888888888773 345677888888888 888888888888887775 7
Q ss_pred HHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 023491 78 TGALMLRAQTLVT----LKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQ 124 (281)
Q Consensus 78 ~~a~~~lg~a~~~----~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~ 124 (281)
+.+++++|.+|.. .+++.+|+..|++++.++ +..+...++.+...
T Consensus 74 ~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~ 122 (273)
T 1ouv_A 74 SNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHD 122 (273)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHc
Confidence 7788888888888 888888888888888773 66677777766554
No 121
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.22 E-value=1.5e-10 Score=90.50 Aligned_cols=83 Identities=17% Similarity=0.067 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 023491 45 ALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQ 124 (281)
Q Consensus 45 ~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~ 124 (281)
..++.+|.++++.|++.+|+..|.+++.++|+++.+|+.+|.++..+|++.+|+..|+++++++|++..++..++.+...
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~ 97 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 97 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 34788999999999999999999999999999999999999999999999999999999999999999999999888776
Q ss_pred hhc
Q 023491 125 LSL 127 (281)
Q Consensus 125 l~~ 127 (281)
++.
T Consensus 98 ~g~ 100 (121)
T 1hxi_A 98 EHN 100 (121)
T ss_dssp HHH
T ss_pred cCC
Confidence 553
No 122
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.22 E-value=2.3e-10 Score=88.86 Aligned_cols=88 Identities=14% Similarity=0.078 Sum_probs=82.7
Q ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 023491 40 KQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQA 119 (281)
Q Consensus 40 ~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~ 119 (281)
.+..+..++.+|.+++..|+|++|+..|.+++.++|.++.+++++|.++..+|++..|+..|++++.++|++..++..++
T Consensus 5 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 84 (137)
T 3q49_B 5 KSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLG 84 (137)
T ss_dssp -CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhc
Q 023491 120 RLKTQLSL 127 (281)
Q Consensus 120 ~l~~~l~~ 127 (281)
.+...++.
T Consensus 85 ~~~~~~~~ 92 (137)
T 3q49_B 85 QCQLEMES 92 (137)
T ss_dssp HHHHHTTC
T ss_pred HHHHHHhh
Confidence 88877653
No 123
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.22 E-value=2.2e-10 Score=86.75 Aligned_cols=89 Identities=18% Similarity=0.128 Sum_probs=85.4
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM 82 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~ 82 (281)
.|.++..+...|.+++..|++.+|+..|.+++.. .|....+++++|.+++.+|++++|+..|.+++.++|.+..+++
T Consensus 42 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~ 118 (131)
T 2vyi_A 42 NPANAVYFCNRAAAYSKLGNYAGAVQDCERAICI---DPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKS 118 (131)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhc---CccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHH
Confidence 4778899999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCH
Q 023491 83 LRAQTLVTLKEY 94 (281)
Q Consensus 83 ~lg~a~~~~g~~ 94 (281)
.+|.++..+|++
T Consensus 119 ~l~~~~~~~~~~ 130 (131)
T 2vyi_A 119 NLKIAELKLREA 130 (131)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHhcC
Confidence 999999999875
No 124
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.20 E-value=2.9e-10 Score=88.85 Aligned_cols=103 Identities=18% Similarity=0.145 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcC---cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCC------
Q 023491 7 PANKIERAHQLYRDGRYEEALGFYTEALSVAKIK---QQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNH------ 77 (281)
Q Consensus 7 a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~---p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~------ 77 (281)
+..+...|..++..|+|.+|+.+|.+++.+.+.. .....+++++|.+++.+|++++|+..|.+++.+.+..
T Consensus 9 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 88 (164)
T 3ro3_A 9 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVE 88 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHH
Confidence 5678899999999999999999999999985521 1234689999999999999999999999999886543
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 023491 78 TGALMLRAQTLVTLKEYNSALFDVNRLIELNP 109 (281)
Q Consensus 78 ~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP 109 (281)
..+++++|.++..+|++++|+..|++++.+.+
T Consensus 89 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~ 120 (164)
T 3ro3_A 89 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ 120 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 56899999999999999999999999998743
No 125
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.20 E-value=1.2e-10 Score=87.70 Aligned_cols=90 Identities=13% Similarity=0.192 Sum_probs=75.1
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCC--CH
Q 023491 1 MASPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYN--HT 78 (281)
Q Consensus 1 ~a~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~--~~ 78 (281)
|.+|.++..++.+|.+++..|+|++|+..|.+++.+ +|....+|+++|.+|+.+|++++|+..|.+++.+.+. +.
T Consensus 1 ~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~---~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~ 77 (100)
T 3ma5_A 1 MEDPEDPFTRYALAQEHLKHDNASRALALFEELVET---DPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQ 77 (100)
T ss_dssp ----CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---STTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCH
T ss_pred CCCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCch
Confidence 578999999999999999999999999999999999 9999999999999999999999999999999998763 44
Q ss_pred HHHHHHHHHHHHcCC
Q 023491 79 GALMLRAQTLVTLKE 93 (281)
Q Consensus 79 ~a~~~lg~a~~~~g~ 93 (281)
.+...+..++...+.
T Consensus 78 ~~~~~l~~~l~~~~~ 92 (100)
T 3ma5_A 78 KDLSELQDAKLKAEG 92 (100)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHccc
Confidence 555555555554443
No 126
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.20 E-value=8.2e-11 Score=102.56 Aligned_cols=125 Identities=19% Similarity=0.185 Sum_probs=108.0
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh-----cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc---
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAK-----IKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELD--- 74 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~-----~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~--- 74 (281)
+|..+..+...|.+++..|+|.+|+.+|.+++.+.. ..+....+++++|.+|+.+|++++|+..|.+++.+.
T Consensus 65 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 144 (311)
T 3nf1_A 65 HPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKV 144 (311)
T ss_dssp SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHh
Confidence 345677889999999999999999999999998852 347778999999999999999999999999999885
Q ss_pred -----CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHhhc
Q 023491 75 -----YNHTGALMLRAQTLVTLKEYNSALFDVNRLIEL--------NPSSEVYQNLQARLKTQLSL 127 (281)
Q Consensus 75 -----p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~l--------dP~~~~a~~~l~~l~~~l~~ 127 (281)
+....+++.+|.++..+|++.+|+..|++++.+ .|....+...++.+...++.
T Consensus 145 ~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 210 (311)
T 3nf1_A 145 LGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGK 210 (311)
T ss_dssp HCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTC
T ss_pred cCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCC
Confidence 456678999999999999999999999999998 66666677777777666543
No 127
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.19 E-value=2.1e-10 Score=102.77 Aligned_cols=116 Identities=15% Similarity=0.078 Sum_probs=104.9
Q ss_pred CCCCHHHHHHHHHHHHH-------cCCH-------HHHHHHHHHHHH-hhhcCcccHHHHHHHHHHHHHcCCHHHHHHHH
Q 023491 3 SPAAPANKIERAHQLYR-------DGRY-------EEALGFYTEALS-VAKIKQQKIALHSNRAACYLKLHDFKKAAEEC 67 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~-------~gdy-------~eAl~~y~~aL~-~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~ 67 (281)
+|.++..|+..|..+.. .|++ ++|+..|.+++. + .|....+|+++|.++.++|++++|+..|
T Consensus 46 ~p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~---~p~~~~~~~~~~~~~~~~~~~~~A~~~~ 122 (308)
T 2ond_A 46 LGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTL---LKKNMLLYFAYADYEESRMKYEKVHSIY 122 (308)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTT---TTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHh---CcccHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 58899999999998874 5885 999999999999 7 8899999999999999999999999999
Q ss_pred HHHHHhcCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 023491 68 TSVLELDYNHTG-ALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARL 121 (281)
Q Consensus 68 ~~al~i~p~~~~-a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l 121 (281)
++++++.|.++. +|+.+|.++.+.|++++|+..|++++++.|....++...+.+
T Consensus 123 ~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~ 177 (308)
T 2ond_A 123 NRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALM 177 (308)
T ss_dssp HHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHH
T ss_pred HHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 999999999887 999999999999999999999999999999876665544433
No 128
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.19 E-value=1e-10 Score=101.98 Aligned_cols=123 Identities=21% Similarity=0.142 Sum_probs=104.6
Q ss_pred CCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh-----cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc--
Q 023491 2 ASPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAK-----IKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELD-- 74 (281)
Q Consensus 2 a~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~-----~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~-- 74 (281)
.+|..+..+...|.+++..|+|.+|+.+|.+++.+.. ..+....+++++|.+|+.+|++++|+..|.+++.+.
T Consensus 22 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 101 (311)
T 3nf1_A 22 EIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREK 101 (311)
T ss_dssp TSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 3577889999999999999999999999999999643 267788999999999999999999999999999883
Q ss_pred ------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHH
Q 023491 75 ------YNHTGALMLRAQTLVTLKEYNSALFDVNRLIELN--------PSSEVYQNLQARLKTQ 124 (281)
Q Consensus 75 ------p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ld--------P~~~~a~~~l~~l~~~ 124 (281)
+....+++.+|.++..+|++.+|+..|++++.+. |....+...++.+...
T Consensus 102 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~ 165 (311)
T 3nf1_A 102 TLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQN 165 (311)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT
T ss_pred HhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH
Confidence 4567799999999999999999999999999984 3344455555555443
No 129
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.17 E-value=1.9e-10 Score=87.97 Aligned_cols=88 Identities=18% Similarity=0.149 Sum_probs=84.2
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM 82 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~ 82 (281)
+|.++..++..|.+++..|++++|+.+|.+++.. .|....+++++|.+++++|++++|+..|.+++.++|.+..+++
T Consensus 46 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~---~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~ 122 (133)
T 2lni_A 46 NPKDAKLYSNRAACYTKLLEFQLALKDCEECIQL---EPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAAD 122 (133)
T ss_dssp CTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHH
T ss_pred CCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHh---CCCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHH
Confidence 5788999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCC
Q 023491 83 LRAQTLVTLKE 93 (281)
Q Consensus 83 ~lg~a~~~~g~ 93 (281)
.+|.++..+|+
T Consensus 123 ~l~~~~~~~~~ 133 (133)
T 2lni_A 123 GYQRCMMAQYN 133 (133)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHhcC
Confidence 99999998774
No 130
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.17 E-value=1.7e-10 Score=102.61 Aligned_cols=102 Identities=9% Similarity=0.058 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh----cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCC-----
Q 023491 7 PANKIERAHQLYRDGRYEEALGFYTEALSVAK----IKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNH----- 77 (281)
Q Consensus 7 a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~----~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~----- 77 (281)
+.++...|.+++..|+|++|+.+|.+++.... ..+..+.+++|+|.+|+++|+|++|+..|.+++.+.+..
T Consensus 155 ~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~ 234 (293)
T 3u3w_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMAL 234 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHH
Confidence 45788999999999999999999999997543 234557789999999999999999999999999887544
Q ss_pred -HHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhC
Q 023491 78 -TGALMLRAQTLVTLKE-YNSALFDVNRLIELN 108 (281)
Q Consensus 78 -~~a~~~lg~a~~~~g~-~~eAl~~~ekAL~ld 108 (281)
+.+|+++|.++..+|+ +++|+..|++|+.+.
T Consensus 235 ~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 235 IGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 7899999999999995 799999999999763
No 131
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.17 E-value=4.7e-10 Score=104.64 Aligned_cols=123 Identities=15% Similarity=0.071 Sum_probs=105.6
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh-----cCcccHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhcC
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAK-----IKQQKIALHSNRAACYLKLH--DFKKAAEECTSVLELDY 75 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~-----~~p~~~~a~~nra~~~~klg--~y~~Ai~~~~~al~i~p 75 (281)
.|..+..+.+.|.+++..|+|.+|+.+|.+++.+.+ ..+..+.++.++|.+++++| +|++|+.+|++++.++|
T Consensus 90 ~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p 169 (472)
T 4g1t_A 90 EIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKP 169 (472)
T ss_dssp TTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHST
T ss_pred chHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCC
Confidence 466778889999999999999999999999998754 23456889999998888765 69999999999999999
Q ss_pred CCHHHHHHHHHHHHH---cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 023491 76 NHTGALMLRAQTLVT---LKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQL 125 (281)
Q Consensus 76 ~~~~a~~~lg~a~~~---~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l 125 (281)
+++.+++.+|.+++. .+++.+|+..|+++++++|.+..+..+++.....+
T Consensus 170 ~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~~ 222 (472)
T 4g1t_A 170 KNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKM 222 (472)
T ss_dssp TCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHH
Confidence 999999999998655 57778999999999999999999888877655443
No 132
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.16 E-value=4.4e-10 Score=103.03 Aligned_cols=121 Identities=15% Similarity=0.136 Sum_probs=80.3
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc----CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCH---
Q 023491 6 APANKIERAHQLYRDGRYEEALGFYTEALSVAKI----KQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHT--- 78 (281)
Q Consensus 6 ~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~----~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~--- 78 (281)
.+..+...|.+++..|++..|+.+|.+++.+.+. .+..+.+++++|.+|..+|+|++|+..|.+++.+.+...
T Consensus 142 ~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 221 (383)
T 3ulq_A 142 KAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQ 221 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChH
Confidence 3456677777777777777777777777776542 223456677777777777777777777777776644222
Q ss_pred ---HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----C-CCCHHHHHHHHHHHHHhh
Q 023491 79 ---GALMLRAQTLVTLKEYNSALFDVNRLIEL-----N-PSSEVYQNLQARLKTQLS 126 (281)
Q Consensus 79 ---~a~~~lg~a~~~~g~~~eAl~~~ekAL~l-----d-P~~~~a~~~l~~l~~~l~ 126 (281)
.+++++|.+|..+|++++|+..|++++.+ + |....+..+++.+...++
T Consensus 222 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g 278 (383)
T 3ulq_A 222 LMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLG 278 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCC
Confidence 46777777777777777777777777773 4 555556666666655443
No 133
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.16 E-value=1.5e-10 Score=105.85 Aligned_cols=121 Identities=16% Similarity=0.169 Sum_probs=105.0
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccH----HHHHHHHHHHHHcCCHHHHHHHHHHHHHh------
Q 023491 4 PAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKI----ALHSNRAACYLKLHDFKKAAEECTSVLEL------ 73 (281)
Q Consensus 4 P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~----~a~~nra~~~~klg~y~~Ai~~~~~al~i------ 73 (281)
+..+..++..|..++..|+|.+|+.+|.+++.. .|.+. .+++++|.+|+.+|+|++|+..|.+++.+
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~---~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 121 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQA---GTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMND 121 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHh---cccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccC
Confidence 345677889999999999999999999999998 66554 68999999999999999999999999988
Q ss_pred cCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHhhc
Q 023491 74 DYNHTGALMLRAQTLVTLKEYNSALFDVNRLIEL------NPSSEVYQNLQARLKTQLSL 127 (281)
Q Consensus 74 ~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~l------dP~~~~a~~~l~~l~~~l~~ 127 (281)
.+....+++.+|.+|..+|++.+|+..|++++.+ .+....+...++.+...++.
T Consensus 122 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 181 (411)
T 4a1s_A 122 RLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGK 181 (411)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCc
Confidence 5667789999999999999999999999999998 45555677777777666554
No 134
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.16 E-value=2.9e-10 Score=94.71 Aligned_cols=86 Identities=17% Similarity=0.209 Sum_probs=78.8
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCC-------CHH-----HHHHHHHHHHHcCCHHHHHHHHHHHHHh---
Q 023491 43 KIALHSNRAACYLKLHDFKKAAEECTSVLELDYN-------HTG-----ALMLRAQTLVTLKEYNSALFDVNRLIEL--- 107 (281)
Q Consensus 43 ~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~-------~~~-----a~~~lg~a~~~~g~~~eAl~~~ekAL~l--- 107 (281)
.+..++++|.+++++|+|++|+..|+++|+++|+ +.. +|+++|.++..+|+|++|+.+|.+||++
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 3566789999999999999999999999999999 554 9999999999999999999999999999
Q ss_pred ----CCCCHHHH----HHHHHHHHHhhcC
Q 023491 108 ----NPSSEVYQ----NLQARLKTQLSLA 128 (281)
Q Consensus 108 ----dP~~~~a~----~~l~~l~~~l~~~ 128 (281)
+|++..++ .+++.+...++..
T Consensus 90 ~~e~~pd~~~A~~~~~~~rG~aL~~lgr~ 118 (159)
T 2hr2_A 90 RGELNQDEGKLWISAVYSRALALDGLGRG 118 (159)
T ss_dssp HCCTTSTHHHHHHHHHHHHHHHHHHTTCH
T ss_pred cccCCCchHHHHHHHHHhHHHHHHHCCCH
Confidence 99999999 9998888777654
No 135
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.16 E-value=3.1e-11 Score=116.25 Aligned_cols=105 Identities=21% Similarity=0.257 Sum_probs=95.6
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM 82 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~ 82 (281)
+|.++..+..+|.+++..|+|++|+..|.+++.+ +|..+.+++++|.+|+.+|+|++|+..|.++++++|.+..+++
T Consensus 36 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l---~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~ 112 (477)
T 1wao_1 36 NPSNAIYYGNRSLAYLRTECYGYALGDATRAIEL---DKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKM 112 (477)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS---CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHH
T ss_pred CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 5888999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHH--HHHcCCHHHHHHHHH-----------HHHHhCCC
Q 023491 83 LRAQT--LVTLKEYNSALFDVN-----------RLIELNPS 110 (281)
Q Consensus 83 ~lg~a--~~~~g~~~eAl~~~e-----------kAL~ldP~ 110 (281)
++|.+ +...|++++|+..++ +++.++|.
T Consensus 113 ~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~ 153 (477)
T 1wao_1 113 KYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDE 153 (477)
T ss_dssp HHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTT
T ss_pred HHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhcccccc
Confidence 99998 899999999999999 88888775
No 136
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.16 E-value=4.1e-10 Score=111.04 Aligned_cols=123 Identities=20% Similarity=0.141 Sum_probs=117.8
Q ss_pred CCCCHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcC--CHHHHHHHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGR----------YEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLH--DFKKAAEECTSV 70 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gd----------y~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg--~y~~Ai~~~~~a 70 (281)
+|.+..+|..+|.++...|+ |.+|+..|.+++.. +|....+|+.|+.++.+++ +|++|+.+|.++
T Consensus 59 nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~---~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~ 135 (567)
T 1dce_A 59 NPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRV---NPKSYGTWHHRCWLLSRLPEPNWARELELCARF 135 (567)
T ss_dssp CTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHcccccHHHHHHHHHHH
Confidence 78999999999999999988 99999999999999 9999999999999999999 779999999999
Q ss_pred HHhcCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcC
Q 023491 71 LELDYNHTGALMLRAQTLVTLK-EYNSALFDVNRLIELNPSSEVYQNLQARLKTQLSLA 128 (281)
Q Consensus 71 l~i~p~~~~a~~~lg~a~~~~g-~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~~~ 128 (281)
++++|.+..||..+|.++..+| .+++|++++.++++++|.|..++..+..+...+...
T Consensus 136 l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l~~~ 194 (567)
T 1dce_A 136 LEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQ 194 (567)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHHSCC
T ss_pred HhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhhccc
Confidence 9999999999999999999999 999999999999999999999999999998887544
No 137
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.15 E-value=1.5e-10 Score=85.70 Aligned_cols=86 Identities=12% Similarity=0.118 Sum_probs=80.3
Q ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHH
Q 023491 40 KQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPS--SEVYQNL 117 (281)
Q Consensus 40 ~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~--~~~a~~~ 117 (281)
+|.+..+++.+|.+++..|++++|+..|.+++.++|.+..+++.+|.++..+|++++|+..|+++++++|. +..++..
T Consensus 2 ~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 81 (112)
T 2kck_A 2 VDQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAA 81 (112)
T ss_dssp CCSSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHH
Confidence 56677889999999999999999999999999999999999999999999999999999999999999999 9999888
Q ss_pred HHHHHHHh
Q 023491 118 QARLKTQL 125 (281)
Q Consensus 118 l~~l~~~l 125 (281)
++.+...+
T Consensus 82 l~~~~~~~ 89 (112)
T 2kck_A 82 KADALRYI 89 (112)
T ss_dssp HHHHHTTC
T ss_pred HHHHHHHH
Confidence 88876554
No 138
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.14 E-value=5e-10 Score=82.78 Aligned_cols=79 Identities=19% Similarity=0.222 Sum_probs=70.9
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH--HHHHHHHH
Q 023491 47 HSNRAACYLKLHDFKKAAEECTSVLELDYNHTG-ALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQ--NLQARLKT 123 (281)
Q Consensus 47 ~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~-a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~--~~l~~l~~ 123 (281)
.+++|.++++.|+|++|+..|.+++.++|.+.. +++++|.++..+|++++|+..|++++.++|++..++ ..+..+..
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~a~~ 82 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQARKMVMDILN 82 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 367999999999999999999999999999999 999999999999999999999999999999998887 44444444
Q ss_pred Hh
Q 023491 124 QL 125 (281)
Q Consensus 124 ~l 125 (281)
..
T Consensus 83 ~~ 84 (99)
T 2kc7_A 83 FY 84 (99)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 139
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.13 E-value=1e-09 Score=100.41 Aligned_cols=122 Identities=14% Similarity=0.007 Sum_probs=115.9
Q ss_pred CCCCHHHHHHHHHHH----HHc---CCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHh
Q 023491 3 SPAAPANKIERAHQL----YRD---GRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFK--KAAEECTSVLEL 73 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~----~~~---gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~--~Ai~~~~~al~i 73 (281)
+|.+..++..++.++ ... +++.+++.++.+++.. +|.+..+|+.|+.++.++|.+. +++..|.++|.+
T Consensus 99 nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~---~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~ 175 (306)
T 3dra_A 99 NEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSS---DPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDT 175 (306)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHh
Confidence 688999999999998 666 8999999999999999 9999999999999999999999 999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcCC------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhc
Q 023491 74 DYNHTGALMLRAQTLVTLKE------YNSALFDVNRLIELNPSSEVYQNLQARLKTQLSL 127 (281)
Q Consensus 74 ~p~~~~a~~~lg~a~~~~g~------~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~~ 127 (281)
+|.+..+|..++.++..++. +++++.++.+++.++|.|..++..+..+...++.
T Consensus 176 d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~ 235 (306)
T 3dra_A 176 DLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDR 235 (306)
T ss_dssp CTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcCC
Confidence 99999999999999999998 9999999999999999999999999999887764
No 140
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.13 E-value=4.9e-10 Score=92.12 Aligned_cols=104 Identities=14% Similarity=0.074 Sum_probs=89.1
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh-------------------------------hcCcccHHHHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVA-------------------------------KIKQQKIALHSNRA 51 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~-------------------------------~~~p~~~~a~~nra 51 (281)
+|.++..++.+|.+++..|++++|+..|.+++... ..+|.+..+++++|
T Consensus 36 ~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la 115 (176)
T 2r5s_A 36 LQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELA 115 (176)
T ss_dssp HHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHH
Confidence 46788888888888888888888877665543221 03788899999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhcCCC--HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023491 52 ACYLKLHDFKKAAEECTSVLELDYNH--TGALMLRAQTLVTLKEYNSALFDVNRLIE 106 (281)
Q Consensus 52 ~~~~klg~y~~Ai~~~~~al~i~p~~--~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ 106 (281)
.+++.+|++++|+..|.++++++|.+ ..+++++|.++..+|++++|+..|+++|.
T Consensus 116 ~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 116 VQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 99999999999999999999999976 66999999999999999999999999875
No 141
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.12 E-value=3.3e-09 Score=92.29 Aligned_cols=112 Identities=12% Similarity=0.094 Sum_probs=87.4
Q ss_pred CCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhcC
Q 023491 4 PAAPANKIERAHQLYR----DGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLK----LHDFKKAAEECTSVLELDY 75 (281)
Q Consensus 4 P~~a~~l~~~G~~~~~----~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~k----lg~y~~Ai~~~~~al~i~p 75 (281)
|.++.+++.+|..++. .+++.+|+.+|.+++.. + +..+++++|.+|+. .+++++|+..|.+++..+
T Consensus 35 ~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~---~--~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~- 108 (273)
T 1ouv_A 35 LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL---N--YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK- 108 (273)
T ss_dssp TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT---T--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT-
T ss_pred CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHC---C--CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC-
Confidence 4566778888888888 88888888888888876 3 67788888888888 888888888888888763
Q ss_pred CCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 023491 76 NHTGALMLRAQTLVT----LKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQ 124 (281)
Q Consensus 76 ~~~~a~~~lg~a~~~----~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~ 124 (281)
++.+++++|.+|.. .+++++|+.+|+++++++ +..+...++.+...
T Consensus 109 -~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~ 158 (273)
T 1ouv_A 109 -YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLYDA 158 (273)
T ss_dssp -CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHH
T ss_pred -CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHHHc
Confidence 77888888888888 888888888888888875 45566666665543
No 142
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.12 E-value=5.3e-10 Score=102.49 Aligned_cols=104 Identities=15% Similarity=0.079 Sum_probs=92.9
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc---CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----c-CC
Q 023491 6 APANKIERAHQLYRDGRYEEALGFYTEALSVAKI---KQQKIALHSNRAACYLKLHDFKKAAEECTSVLEL-----D-YN 76 (281)
Q Consensus 6 ~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~---~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i-----~-p~ 76 (281)
.+..+...|.++...|+|++|+.+|.+++.+.+. .+..+.+++++|.+|+.+|+|++|+..|.+++.+ + |.
T Consensus 183 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~ 262 (383)
T 3ulq_A 183 LLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPS 262 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGG
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchh
Confidence 3567889999999999999999999999998652 2334578999999999999999999999999994 5 77
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 023491 77 HTGALMLRAQTLVTLKEYNSALFDVNRLIELNP 109 (281)
Q Consensus 77 ~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP 109 (281)
.+.+++++|.++..+|++++|+..|++++.+.+
T Consensus 263 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 263 LPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 788999999999999999999999999999854
No 143
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.12 E-value=3.6e-10 Score=94.41 Aligned_cols=95 Identities=12% Similarity=0.119 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 023491 8 ANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQT 87 (281)
Q Consensus 8 ~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a 87 (281)
..+..+|.+++..|+|.+|+.+|.+++.+ +|....+++++|.+|+.+|+|++|+..|.+++.++|.+..++..++.+
T Consensus 89 ~~~~~la~~~~~~~~~~~A~~~~~~al~~---~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 165 (198)
T 2fbn_A 89 SCNLNLATCYNKNKDYPKAIDHASKVLKI---DKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELC 165 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH---STTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHh---CcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHH
Confidence 78899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHH-HHHHHHH
Q 023491 88 LVTLKEYNSAL-FDVNRLI 105 (281)
Q Consensus 88 ~~~~g~~~eAl-~~~ekAL 105 (281)
+..++++.++. ..|.+.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~f 184 (198)
T 2fbn_A 166 VNKLKEARKKDKLTFGGMF 184 (198)
T ss_dssp HHHHHHHHC----------
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 99999988887 4444443
No 144
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.12 E-value=7.9e-10 Score=101.45 Aligned_cols=105 Identities=16% Similarity=0.019 Sum_probs=94.4
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc---CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-----hcCCC
Q 023491 6 APANKIERAHQLYRDGRYEEALGFYTEALSVAKI---KQQKIALHSNRAACYLKLHDFKKAAEECTSVLE-----LDYNH 77 (281)
Q Consensus 6 ~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~---~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~-----i~p~~ 77 (281)
.+..+...|.+++..|+|++|+.+|.+++.+... ....+.+++++|.+|+.+|++++|+..|.+++. .+|..
T Consensus 181 ~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~ 260 (378)
T 3q15_A 181 TIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLL 260 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhH
Confidence 3567889999999999999999999999998652 224577899999999999999999999999999 67778
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 023491 78 TGALMLRAQTLVTLKEYNSALFDVNRLIELNPS 110 (281)
Q Consensus 78 ~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~ 110 (281)
+.+++++|.++..+|++++|+..|++++.+.+.
T Consensus 261 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 261 PKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999654
No 145
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.12 E-value=4.8e-10 Score=99.60 Aligned_cols=102 Identities=9% Similarity=0.073 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcc----cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCC------
Q 023491 7 PANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQ----KIALHSNRAACYLKLHDFKKAAEECTSVLELDYN------ 76 (281)
Q Consensus 7 a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~----~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~------ 76 (281)
+.++...|.+++..|+|++|+.+|.+++.+....+. .+.+++++|.+|+.+|+|++|+..|.+++.+.+.
T Consensus 155 ~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~ 234 (293)
T 2qfc_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMAL 234 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHH
Confidence 557888999999999999999999999965442333 2368899999999999999999999999887643
Q ss_pred CHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHhC
Q 023491 77 HTGALMLRAQTLVTLKEYNSA-LFDVNRLIELN 108 (281)
Q Consensus 77 ~~~a~~~lg~a~~~~g~~~eA-l~~~ekAL~ld 108 (281)
...+|+++|.++..+|++++| ..+|++|+.+.
T Consensus 235 ~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 235 IGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 267899999999999999999 77789888764
No 146
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.11 E-value=1.5e-09 Score=99.38 Aligned_cols=121 Identities=13% Similarity=-0.001 Sum_probs=114.0
Q ss_pred CCCCHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHH----HHc---CCHHHHHHHHHHHHHh
Q 023491 3 SPAAPANKIERAHQLYRDG--RYEEALGFYTEALSVAKIKQQKIALHSNRAACY----LKL---HDFKKAAEECTSVLEL 73 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~g--dy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~----~kl---g~y~~Ai~~~~~al~i 73 (281)
||.+..++..+|.++...| ++.+|+.++..+|.. +|.+..+|+.|+.++ ..+ +++.+++..|.+++.+
T Consensus 63 nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~---nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~ 139 (306)
T 3dra_A 63 LASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALD---NEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSS 139 (306)
T ss_dssp CTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHH---CTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHH---CcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHh
Confidence 7899999999999999999 999999999999999 999999999999999 777 8999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh
Q 023491 74 DYNHTGALMLRAQTLVTLKEYN--SALFDVNRLIELNPSSEVYQNLQARLKTQLS 126 (281)
Q Consensus 74 ~p~~~~a~~~lg~a~~~~g~~~--eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~ 126 (281)
+|.+..+|+.++.++..+|.+. +++..+.++++++|.|-.++..+..+...+.
T Consensus 140 ~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~ 194 (306)
T 3dra_A 140 DPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKK 194 (306)
T ss_dssp CTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSG
T ss_pred CCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcc
Confidence 9999999999999999999998 9999999999999999999999888876654
No 147
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.11 E-value=9.5e-10 Score=85.82 Aligned_cols=103 Identities=16% Similarity=0.171 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcC---cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCC------CH
Q 023491 8 ANKIERAHQLYRDGRYEEALGFYTEALSVAKIK---QQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYN------HT 78 (281)
Q Consensus 8 ~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~---p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~------~~ 78 (281)
..+...|.+++..|+|.+|+.+|.+++.+.+.. +....+++++|.+++.+|++++|+..|.+++.+.+. ..
T Consensus 50 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 129 (164)
T 3ro3_A 50 IAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEG 129 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHH
Confidence 577889999999999999999999999985421 223778999999999999999999999999987432 24
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 023491 79 GALMLRAQTLVTLKEYNSALFDVNRLIELNPS 110 (281)
Q Consensus 79 ~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~ 110 (281)
.+++.+|.++..+|++++|+..|++++++...
T Consensus 130 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 130 RACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999987543
No 148
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.11 E-value=3.7e-10 Score=107.83 Aligned_cols=91 Identities=19% Similarity=0.145 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHH
Q 023491 7 PANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQ 86 (281)
Q Consensus 7 a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~ 86 (281)
+..++++|.++++.|+|.+|+.+|.++|.+ +|.+..+|+++|.+|+.+|+|++|+.+|.++++++|++..++..++.
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~---~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~ 393 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALGL---DSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISM 393 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc---CCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 688999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHH
Q 023491 87 TLVTLKEYNSALFD 100 (281)
Q Consensus 87 a~~~~g~~~eAl~~ 100 (281)
++..++++.+|...
T Consensus 394 ~~~~~~~~~~a~~~ 407 (457)
T 1kt0_A 394 CQKKAKEHNERDRR 407 (457)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988754
No 149
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.10 E-value=4.8e-10 Score=110.50 Aligned_cols=122 Identities=12% Similarity=0.061 Sum_probs=114.7
Q ss_pred CCCCHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhcCCCHH
Q 023491 3 SPAAPANKIERAHQLYRDG--RYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLH-DFKKAAEECTSVLELDYNHTG 79 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~g--dy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg-~y~~Ai~~~~~al~i~p~~~~ 79 (281)
+|.+..+|..+|-++...+ +|.+|+.++.+++.. +|.+..+|++|+.++.++| .++++++++.++|+.+|.+..
T Consensus 103 ~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~---d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~s 179 (567)
T 1dce_A 103 NPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEA---DERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYS 179 (567)
T ss_dssp CTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHH
T ss_pred CCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhh---ccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCcc
Confidence 6899999999999999999 779999999999999 9999999999999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHc--------------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhc
Q 023491 80 ALMLRAQTLVTL--------------KEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLSL 127 (281)
Q Consensus 80 a~~~lg~a~~~~--------------g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~~ 127 (281)
+|+.+|.++..+ +.+++|++++.+|+.++|++..++..+.-+......
T Consensus 180 aW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~y~~~ll~~~~~ 241 (567)
T 1dce_A 180 SWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRAEP 241 (567)
T ss_dssp HHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHhcCCC
Confidence 999999999986 668999999999999999999999999888665543
No 150
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.10 E-value=1.9e-10 Score=92.98 Aligned_cols=90 Identities=12% Similarity=-0.026 Sum_probs=80.3
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCH-HHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHT-GAL 81 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~-~a~ 81 (281)
+|.++..+..+|.+++..|+|.+|+..|.++|.+ +|.++.+|+++|.+|+.+|+|++|+.+|.+++.++|++. .+.
T Consensus 59 ~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~---~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~ 135 (162)
T 3rkv_A 59 DRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKR---EETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVA 135 (162)
T ss_dssp HHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH---STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhc---CCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHH
Confidence 3556689999999999999999999999999999 999999999999999999999999999999999999998 667
Q ss_pred HHHHHHHHHcCCHH
Q 023491 82 MLRAQTLVTLKEYN 95 (281)
Q Consensus 82 ~~lg~a~~~~g~~~ 95 (281)
..++.+...++.+.
T Consensus 136 ~~l~~~~~~~~~~~ 149 (162)
T 3rkv_A 136 REMKIVTERRAEKK 149 (162)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH
Confidence 77777766655443
No 151
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.10 E-value=5.7e-10 Score=97.22 Aligned_cols=119 Identities=18% Similarity=0.215 Sum_probs=101.3
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCccc----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------cC
Q 023491 6 APANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQK----IALHSNRAACYLKLHDFKKAAEECTSVLEL------DY 75 (281)
Q Consensus 6 ~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~----~~a~~nra~~~~klg~y~~Ai~~~~~al~i------~p 75 (281)
+...++..|..++..|+|.+|+.+|.+++.. .|.+ ..+++.+|.+++..|++++|+..|.+++.+ .+
T Consensus 4 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~---~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 80 (338)
T 3ro2_A 4 SCLELALEGERLCKSGDCRAGVSFFEAAVQV---GTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQL 80 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhh---CcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccH
Confidence 4567888999999999999999999999998 6655 578999999999999999999999999887 44
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHhhc
Q 023491 76 NHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSS------EVYQNLQARLKTQLSL 127 (281)
Q Consensus 76 ~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~------~~a~~~l~~l~~~l~~ 127 (281)
....+++.+|.++..+|++.+|+..|++++.+.+.. ..+...++.+...++.
T Consensus 81 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 138 (338)
T 3ro2_A 81 GEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 138 (338)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCc
Confidence 557799999999999999999999999999986643 2256666666665554
No 152
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.10 E-value=3.6e-10 Score=86.83 Aligned_cols=87 Identities=10% Similarity=0.079 Sum_probs=77.5
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM 82 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~ 82 (281)
+|.++..++.+|.+++..|+|++|+.+|.+++.+ +|.+..+++++|.|++.+|++++|+..|.+++.+.|.++....
T Consensus 23 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~---~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 99 (117)
T 3k9i_A 23 GKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQ---FPNHQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQS 99 (117)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHH
T ss_pred CccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHH
Confidence 4778899999999999999999999999999999 9999999999999999999999999999999999999988765
Q ss_pred HHHHHHHHcC
Q 023491 83 LRAQTLVTLK 92 (281)
Q Consensus 83 ~lg~a~~~~g 92 (281)
....+....+
T Consensus 100 ~~~ai~~~~~ 109 (117)
T 3k9i_A 100 YKQAILFYAD 109 (117)
T ss_dssp THHHHHHHTT
T ss_pred HHHHHHHHHH
Confidence 4444444333
No 153
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.10 E-value=2e-09 Score=80.71 Aligned_cols=87 Identities=24% Similarity=0.350 Sum_probs=82.3
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM 82 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~ 82 (281)
.|.++..+...|.+++..|++.+|+..|.+++.. .|....+++++|.+++.+|++++|+..|.+++.++|.+..+++
T Consensus 39 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~---~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 115 (125)
T 1na0_A 39 DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL---DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQ 115 (125)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh---CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHH
Confidence 4678889999999999999999999999999998 8888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcC
Q 023491 83 LRAQTLVTLK 92 (281)
Q Consensus 83 ~lg~a~~~~g 92 (281)
.+|.++...|
T Consensus 116 ~l~~~~~~~g 125 (125)
T 1na0_A 116 NLGNAKQKQG 125 (125)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhcc
Confidence 9999988765
No 154
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.10 E-value=5.5e-10 Score=91.94 Aligned_cols=104 Identities=10% Similarity=-0.014 Sum_probs=92.0
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh---cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---cCC--
Q 023491 5 AAPANKIERAHQLYRDGRYEEALGFYTEALSVAK---IKQQKIALHSNRAACYLKLHDFKKAAEECTSVLEL---DYN-- 76 (281)
Q Consensus 5 ~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~---~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i---~p~-- 76 (281)
..+..+...|.+++..|+|.+|+.+|.+++.+.. ..+....+++++|.+|+.+|++++|+..|.+++.+ .++
T Consensus 24 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 103 (203)
T 3gw4_A 24 TASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDP 103 (203)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccH
Confidence 5678899999999999999999999999999654 24566888999999999999999999999999988 342
Q ss_pred --CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 023491 77 --HTGALMLRAQTLVTLKEYNSALFDVNRLIELN 108 (281)
Q Consensus 77 --~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ld 108 (281)
...+++++|.++..+|++++|+..|++++.+.
T Consensus 104 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 137 (203)
T 3gw4_A 104 LAASANAYEVATVALHFGDLAGARQEYEKSLVYA 137 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 34679999999999999999999999999874
No 155
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.10 E-value=9.4e-10 Score=99.42 Aligned_cols=121 Identities=19% Similarity=0.213 Sum_probs=103.5
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCccc----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc-----
Q 023491 4 PAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQK----IALHSNRAACYLKLHDFKKAAEECTSVLELD----- 74 (281)
Q Consensus 4 P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~----~~a~~nra~~~~klg~y~~Ai~~~~~al~i~----- 74 (281)
...+..++..|..++..|+|.+|+.+|.+++.. .|.+ +.+++.+|.+|+.+|+|.+|+..|.+++.+.
T Consensus 6 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~---~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 82 (406)
T 3sf4_A 6 EASCLELALEGERLCKSGDCRAGVSFFEAAVQV---GTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGD 82 (406)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhc---CcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccc
Confidence 346778899999999999999999999999998 5555 5789999999999999999999999998873
Q ss_pred -CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHhhc
Q 023491 75 -YNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSS------EVYQNLQARLKTQLSL 127 (281)
Q Consensus 75 -p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~------~~a~~~l~~l~~~l~~ 127 (281)
+....+++.+|.++..+|++.+|+..|++++.+.|.. ..+...++.+...++.
T Consensus 83 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 142 (406)
T 3sf4_A 83 QLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 142 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCC
Confidence 4457799999999999999999999999999987643 3366666666666554
No 156
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=99.09 E-value=1e-09 Score=90.64 Aligned_cols=103 Identities=16% Similarity=0.157 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhc-C-CCHHHHHHHHHHHHHcCCHHHH
Q 023491 23 YEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLH---DFKKAAEECTSVLELD-Y-NHTGALMLRAQTLVTLKEYNSA 97 (281)
Q Consensus 23 y~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg---~y~~Ai~~~~~al~i~-p-~~~~a~~~lg~a~~~~g~~~eA 97 (281)
...+...|...+.. ++.+..+.|++|.|+.+.+ ++.+++..++.+++.+ | .+..++|++|.+++++|+|..|
T Consensus 14 l~~~~~~y~~e~~~---~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A 90 (152)
T 1pc2_A 14 LLKFEKKFQSEKAA---GSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKA 90 (152)
T ss_dssp HHHHHHHHHHHHHT---TCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHHHHHcc---CCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHH
Confidence 45566778887776 7889999999999999988 7889999999999998 6 5789999999999999999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHhhcC
Q 023491 98 LFDVNRLIELNPSSEVYQNLQARLKTQLSLA 128 (281)
Q Consensus 98 l~~~ekAL~ldP~~~~a~~~l~~l~~~l~~~ 128 (281)
+.+++++|+++|+|..++.++..+...+...
T Consensus 91 ~~y~~~lL~ieP~n~QA~~Lk~~ie~~~~kd 121 (152)
T 1pc2_A 91 LKYVRGLLQTEPQNNQAKELERLIDKAMKKD 121 (152)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999998887543
No 157
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.09 E-value=8.4e-11 Score=107.95 Aligned_cols=104 Identities=12% Similarity=0.061 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 023491 8 ANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQT 87 (281)
Q Consensus 8 ~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a 87 (281)
..++++|.+++..|+|.+|+.+|.++|.+ +|.+..+++++|.+|+.+|+|++|+.+|.++++++|.+..++..++.+
T Consensus 231 ~~~~nla~~~~~~g~~~~A~~~~~~al~~---~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l 307 (338)
T 2if4_A 231 PCHLNIAACLIKLKRYDEAIGHCNIVLTE---EEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRAL 307 (338)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC---------------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 37889999999999999999999999999 999999999999999999999999999999999999999999999998
Q ss_pred -HHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 023491 88 -LVTLKEYNSALFDVNRLIELNPSSEVY 114 (281)
Q Consensus 88 -~~~~g~~~eAl~~~ekAL~ldP~~~~a 114 (281)
....+.+..+...|.+++.+.|.++..
T Consensus 308 ~~~~~~~~~~a~~~~~~~l~~~p~~~~~ 335 (338)
T 2if4_A 308 AEQEKALYQKQKEMYKGIFKGKDEGGAK 335 (338)
T ss_dssp ----------------------------
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCCCCCC
Confidence 455677889999999999999987643
No 158
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.08 E-value=5.5e-10 Score=100.29 Aligned_cols=103 Identities=13% Similarity=0.067 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcC---cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCC------
Q 023491 7 PANKIERAHQLYRDGRYEEALGFYTEALSVAKIK---QQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNH------ 77 (281)
Q Consensus 7 a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~---p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~------ 77 (281)
+..+...|.++.. |+|++|+.+|.+++.+.+.. .....++.++|.+|.++|+|++|+..|.+++.+.+.+
T Consensus 116 a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 194 (307)
T 2ifu_A 116 AMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTC 194 (307)
T ss_dssp HHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHH
Confidence 3455566666666 77777777777776664311 1124566677777777777777777777776665432
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023491 78 TGALMLRAQTLVTLKEYNSALFDVNRLIELNPSS 111 (281)
Q Consensus 78 ~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~ 111 (281)
..+++.+|.++..+|++.+|+..|++++ ++|..
T Consensus 195 ~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~ 227 (307)
T 2ifu_A 195 YKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGF 227 (307)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCC
Confidence 2356666666666777777777777777 66654
No 159
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.08 E-value=6.9e-10 Score=98.57 Aligned_cols=116 Identities=16% Similarity=0.106 Sum_probs=95.8
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcc---cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc-------CCCHHH
Q 023491 11 IERAHQLYRDGRYEEALGFYTEALSVAKIKQQ---KIALHSNRAACYLKLHDFKKAAEECTSVLELD-------YNHTGA 80 (281)
Q Consensus 11 ~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~---~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~-------p~~~~a 80 (281)
...|..++..++|++|+.+|.+++.+...... .+.+++++|.+|+.+|+|++|+..|.+++.+. +....+
T Consensus 119 ~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 198 (293)
T 3u3w_A 119 YYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKV 198 (293)
T ss_dssp HHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHH
T ss_pred HHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHH
Confidence 35788888889999999999999996332222 25679999999999999999999999999532 223458
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHhh
Q 023491 81 LMLRAQTLVTLKEYNSALFDVNRLIELNPSS------EVYQNLQARLKTQLS 126 (281)
Q Consensus 81 ~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~------~~a~~~l~~l~~~l~ 126 (281)
++++|.+|..+|+|++|+..|++++.+.+.. ..+..+++.+...++
T Consensus 199 ~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g 250 (293)
T 3u3w_A 199 RYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLE 250 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999987543 677888888887765
No 160
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.07 E-value=8.7e-10 Score=98.43 Aligned_cols=104 Identities=15% Similarity=-0.011 Sum_probs=93.3
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh-------------------------------hcCcccHHHHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVA-------------------------------KIKQQKIALHSNRA 51 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~-------------------------------~~~p~~~~a~~nra 51 (281)
+|.++.+++.+|.++...|++++|+..|.+++... ..+|.+..+++++|
T Consensus 147 ~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la 226 (287)
T 3qou_A 147 SNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLA 226 (287)
T ss_dssp TTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHH
Confidence 68899999999999999999999887766653210 13889999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhcCCC--HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023491 52 ACYLKLHDFKKAAEECTSVLELDYNH--TGALMLRAQTLVTLKEYNSALFDVNRLIE 106 (281)
Q Consensus 52 ~~~~klg~y~~Ai~~~~~al~i~p~~--~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ 106 (281)
.+|+..|++++|+..|.++++.+|++ ..++.++|.++..+|+..+|+..|+++|.
T Consensus 227 ~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 227 LQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDALASXYRRQLY 283 (287)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 99999999999999999999999998 89999999999999999999999999885
No 161
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.07 E-value=1.4e-09 Score=99.80 Aligned_cols=121 Identities=12% Similarity=0.025 Sum_probs=104.2
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcC----cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCC-----
Q 023491 6 APANKIERAHQLYRDGRYEEALGFYTEALSVAKIK----QQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYN----- 76 (281)
Q Consensus 6 ~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~----p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~----- 76 (281)
.+..+...|.+++..|++..|+.+|.+++.+.+.. +..+.+++++|.+|+.+|+|++|+..|.+++.+.+.
T Consensus 140 ~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~ 219 (378)
T 3q15_A 140 KAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDR 219 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHH
Confidence 46788899999999999999999999999986632 235788999999999999999999999999987531
Q ss_pred -CHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-----hCCCCHHHHHHHHHHHHHhh
Q 023491 77 -HTGALMLRAQTLVTLKEYNSALFDVNRLIE-----LNPSSEVYQNLQARLKTQLS 126 (281)
Q Consensus 77 -~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~-----ldP~~~~a~~~l~~l~~~l~ 126 (281)
...+++++|.+|..+|++++|+..|++++. .+|....+...++.+...++
T Consensus 220 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g 275 (378)
T 3q15_A 220 FIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAG 275 (378)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCC
Confidence 246899999999999999999999999999 67777777788887776654
No 162
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.07 E-value=2.7e-10 Score=101.58 Aligned_cols=116 Identities=17% Similarity=0.168 Sum_probs=97.4
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCH----
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHT---- 78 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~---- 78 (281)
+|.++..+..+|.+++..|+|.+|+..|.+++.+ +|.+..+++++|.+|+.+|+|++|+..|.+++.++|++.
T Consensus 34 ~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~---~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~ 110 (281)
T 2c2l_A 34 NPLVAVYYTNRALCYLKMQQPEQALADCRRALEL---DGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFG 110 (281)
T ss_dssp CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchhhHH
Confidence 5889999999999999999999999999999999 999999999999999999999999999999999988652
Q ss_pred -HH--------------------------HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 023491 79 -GA--------------------------LMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKT 123 (281)
Q Consensus 79 -~a--------------------------~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~ 123 (281)
.+ ...++. +..|++++|+..|+++++++|++..+...+..+..
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~--l~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 180 (281)
T 2c2l_A 111 DDIPSALRIAKKKRWNSIEERRIHQESELHSYLTR--LIAAERERELEECQRNHEGHEDDGHIRAQQACIEA 180 (281)
T ss_dssp SHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHH--HHHHHHHHHHTTTSGGGTTTSCHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH--HHHHHHHHHHHHHHhhhccccchhhhhhHHHHHHH
Confidence 11 111122 23578899999999999999988776666655443
No 163
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.07 E-value=2.7e-09 Score=94.75 Aligned_cols=120 Identities=17% Similarity=0.128 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcC---cccHHHHHHHHHHHHHcCCHHHHHHHHHHHH---HhcCCCH----
Q 023491 9 NKIERAHQLYRDGRYEEALGFYTEALSVAKIK---QQKIALHSNRAACYLKLHDFKKAAEECTSVL---ELDYNHT---- 78 (281)
Q Consensus 9 ~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~---p~~~~a~~nra~~~~klg~y~~Ai~~~~~al---~i~p~~~---- 78 (281)
.++..|..+...|+|++|+.+|.+++...... ...+.+++++|.+|+.+|+|++|+..|.+++ ...+...
T Consensus 117 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~ 196 (293)
T 2qfc_A 117 WQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDV 196 (293)
T ss_dssp HHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchH
Confidence 34567788888899999999999999764311 1226689999999999999999999999999 4455533
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHhhcC
Q 023491 79 GALMLRAQTLVTLKEYNSALFDVNRLIELNPS------SEVYQNLQARLKTQLSLA 128 (281)
Q Consensus 79 ~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~------~~~a~~~l~~l~~~l~~~ 128 (281)
.+++++|.+|..+|+|++|+..|++++.+.+. ...+..+++.+...++..
T Consensus 197 ~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~ 252 (293)
T 2qfc_A 197 KVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYE 252 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCC
T ss_pred HHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCc
Confidence 69999999999999999999999999998643 156677777777766544
No 164
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.07 E-value=5.6e-10 Score=100.24 Aligned_cols=104 Identities=12% Similarity=0.021 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh--cCc-ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCC------
Q 023491 7 PANKIERAHQLYRDGRYEEALGFYTEALSVAK--IKQ-QKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNH------ 77 (281)
Q Consensus 7 a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~--~~p-~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~------ 77 (281)
+..+...|.++...|+|.+|+.+|.+++.+.. .++ ..+.++.++|.+|.. |+|++|+..|.+++.+.+..
T Consensus 76 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~ 154 (307)
T 2ifu_A 76 AKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQA 154 (307)
T ss_dssp HHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHH
Confidence 55778899999999999999999999999854 122 246789999999999 99999999999999997643
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023491 78 TGALMLRAQTLVTLKEYNSALFDVNRLIELNPSS 111 (281)
Q Consensus 78 ~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~ 111 (281)
..+++++|.+|..+|+|.+|+..|++++.+.|.+
T Consensus 155 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 188 (307)
T 2ifu_A 155 AELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM 188 (307)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 5789999999999999999999999999987653
No 165
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.06 E-value=3e-09 Score=79.03 Aligned_cols=84 Identities=14% Similarity=0.134 Sum_probs=78.6
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 023491 43 KIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLK 122 (281)
Q Consensus 43 ~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~ 122 (281)
.+..++.+|.+++..|+|++|+..|.+++.++|.++.+++.+|.++..+|++.+|+..|++++.++|.+..+...++.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAAL 82 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999988887
Q ss_pred HHhh
Q 023491 123 TQLS 126 (281)
Q Consensus 123 ~~l~ 126 (281)
..++
T Consensus 83 ~~~~ 86 (118)
T 1elw_A 83 EFLN 86 (118)
T ss_dssp HHTT
T ss_pred HHHh
Confidence 6654
No 166
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.06 E-value=5.5e-09 Score=96.64 Aligned_cols=123 Identities=20% Similarity=0.144 Sum_probs=115.4
Q ss_pred CCCCCHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCC--HHHHHHHHHH
Q 023491 2 ASPAAPANKIERAHQLYRDGR----------YEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHD--FKKAAEECTS 69 (281)
Q Consensus 2 a~P~~a~~l~~~G~~~~~~gd----------y~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~--y~~Ai~~~~~ 69 (281)
-||.+..++..++.++...+. +.+++.++..+|.. +|.+..+|+.|+.++.+++. +.+++.+|.+
T Consensus 59 ~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~---~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k 135 (331)
T 3dss_A 59 ANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRV---NPKSYGTWHHRCWLLSRLPEPNWARELELCAR 135 (331)
T ss_dssp TCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHH
T ss_pred HCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHhccCcccHHHHHHHHHH
Confidence 479999999999999988766 78999999999998 99999999999999999994 9999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhc
Q 023491 70 VLELDYNHTGALMLRAQTLVTLKE-YNSALFDVNRLIELNPSSEVYQNLQARLKTQLSL 127 (281)
Q Consensus 70 al~i~p~~~~a~~~lg~a~~~~g~-~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~~ 127 (281)
++.++|.+..+|..++.++..+|. +++++.++.++++++|.|..++..+..+...+..
T Consensus 136 ~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l~~ 194 (331)
T 3dss_A 136 FLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHP 194 (331)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHSC
T ss_pred HHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999 6999999999999999999999999999887743
No 167
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.05 E-value=5.6e-09 Score=96.59 Aligned_cols=119 Identities=13% Similarity=0.060 Sum_probs=110.6
Q ss_pred CCCCHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhcCCCHH
Q 023491 3 SPAAPANKIERAHQLYRDG--RYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHD-FKKAAEECTSVLELDYNHTG 79 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~g--dy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~-y~~Ai~~~~~al~i~p~~~~ 79 (281)
+|.+..+|..++.++...+ .|.+++.++.+++.. +|.+..+|+.|+.++..+|. +++++.++.++|..+|.+..
T Consensus 104 ~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~---dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~S 180 (331)
T 3dss_A 104 NPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEA---DERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYS 180 (331)
T ss_dssp CTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHH
T ss_pred CCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHH
Confidence 7899999999999999998 499999999999999 99999999999999999999 69999999999999999999
Q ss_pred HHHHHHHHHHHc--------------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 023491 80 ALMLRAQTLVTL--------------KEYNSALFDVNRLIELNPSSEVYQNLQARLKTQ 124 (281)
Q Consensus 80 a~~~lg~a~~~~--------------g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~ 124 (281)
+|..++.++..+ +.+.+++.++.+++.++|++..++..+.-+...
T Consensus 181 AW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~ll~~ 239 (331)
T 3dss_A 181 SWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGA 239 (331)
T ss_dssp HHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Confidence 999999999988 569999999999999999999999866555443
No 168
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.05 E-value=1.3e-09 Score=98.61 Aligned_cols=112 Identities=11% Similarity=-0.050 Sum_probs=95.5
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc--CC-CH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQ-KIALHSNRAACYLKLHDFKKAAEECTSVLELD--YN-HT 78 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~-~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~--p~-~~ 78 (281)
.|..+ .++.+|..+++.++|.+|+.+|+.++.. .++. ...+++++|.++..+|++++|+..|.+++... |. .+
T Consensus 132 ~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~--~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~ 208 (282)
T 4f3v_A 132 GSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKW--PDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACAR 208 (282)
T ss_dssp TCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGC--SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHH
T ss_pred CCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhcc--CCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccH
Confidence 45566 8899999999999999999999977764 1222 24589999999999999999999999998654 54 66
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 023491 79 GALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQ 118 (281)
Q Consensus 79 ~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l 118 (281)
.+++++|.++..+|+.++|...|++++..+|+ ..+...+
T Consensus 209 da~~~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~~aL 247 (282)
T 4f3v_A 209 AIAWYLAMARRSQGNESAAVALLEWLQTTHPE-PKVAAAL 247 (282)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHHHHH
Confidence 79999999999999999999999999999999 7766655
No 169
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.04 E-value=2.1e-09 Score=97.16 Aligned_cols=121 Identities=16% Similarity=0.148 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcC---cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCC------H
Q 023491 8 ANKIERAHQLYRDGRYEEALGFYTEALSVAKIK---QQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNH------T 78 (281)
Q Consensus 8 ~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~---p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~------~ 78 (281)
..+...|.+++..|++++|+.+|.+++.+.+.. .....+++++|.+|+.+|++++|+..|.+++.+.+.. .
T Consensus 228 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~ 307 (406)
T 3sf4_A 228 RAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEG 307 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHH
Confidence 356677777777777777777777777663311 1125667777777777777777777777777665433 5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHhhcC
Q 023491 79 GALMLRAQTLVTLKEYNSALFDVNRLIELNPS------SEVYQNLQARLKTQLSLA 128 (281)
Q Consensus 79 ~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~------~~~a~~~l~~l~~~l~~~ 128 (281)
.+++.+|.++..+|++.+|+..|++++.+.+. ...+...++.+...++..
T Consensus 308 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 363 (406)
T 3sf4_A 308 RACWSLGNAYTALGNHDQAMHFAEKHLEISREVGDKSGELTARLNLSDLQMVLGLS 363 (406)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHhhHh
Confidence 57777777777777777777777777776332 244555566665555543
No 170
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.02 E-value=4e-09 Score=80.83 Aligned_cols=81 Identities=19% Similarity=0.057 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHH
Q 023491 46 LHSNRAACYLKLHDFKKAAEECTSVLELDYNHT---GALMLRAQTLVTLKEYNSALFDVNRLIELNPSS---EVYQNLQA 119 (281)
Q Consensus 46 a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~---~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~---~~a~~~l~ 119 (281)
+++++|.+++..|+|.+|+..|.+++..+|.+. .+++.+|.+++.+|++.+|+..|++++.++|++ ..+...++
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la 83 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLG 83 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHH
Confidence 478899999999999999999999999999988 899999999999999999999999999999999 88888888
Q ss_pred HHHHHhh
Q 023491 120 RLKTQLS 126 (281)
Q Consensus 120 ~l~~~l~ 126 (281)
.+...++
T Consensus 84 ~~~~~~g 90 (129)
T 2xev_A 84 LSQYGEG 90 (129)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 8876654
No 171
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.00 E-value=4e-09 Score=82.08 Aligned_cols=88 Identities=17% Similarity=0.139 Sum_probs=81.9
Q ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q 023491 40 KQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNH---TGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQN 116 (281)
Q Consensus 40 ~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~---~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~ 116 (281)
.+..+..++.+|.+++..|+|.+|+..|.+++.++|.+ ..+++++|.++..+|++.+|+..|++++.++|.+..++.
T Consensus 24 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 103 (148)
T 2dba_A 24 GASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALY 103 (148)
T ss_dssp TCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHH
T ss_pred chHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHH
Confidence 56788999999999999999999999999999999987 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhc
Q 023491 117 LQARLKTQLSL 127 (281)
Q Consensus 117 ~l~~l~~~l~~ 127 (281)
.++.+...++.
T Consensus 104 ~~a~~~~~~~~ 114 (148)
T 2dba_A 104 RRSQALEKLGR 114 (148)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHcCC
Confidence 88888776543
No 172
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.00 E-value=5.8e-09 Score=101.25 Aligned_cols=114 Identities=16% Similarity=0.177 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhhh-----cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----cCCCH
Q 023491 9 NKIERAHQLYRDGRYEEALGFYTEALSVAK-----IKQQKIALHSNRAACYLKLHDFKKAAEECTSVLEL-----DYNHT 78 (281)
Q Consensus 9 ~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~-----~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i-----~p~~~ 78 (281)
..++.+..+..+|+|++|+.+|.++|.+.. .+|..+..+.|+|.+|..+|+|++|+..|.++|.+ .++++
T Consensus 311 ~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp 390 (490)
T 3n71_A 311 DTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNA 390 (490)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCH
Confidence 345566677889999999999999998754 67788999999999999999999999999999977 35554
Q ss_pred ---HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHHHHHHHHH
Q 023491 79 ---GALMLRAQTLVTLKEYNSALFDVNRLIEL-----NPSSEVYQNLQARLK 122 (281)
Q Consensus 79 ---~a~~~lg~a~~~~g~~~eAl~~~ekAL~l-----dP~~~~a~~~l~~l~ 122 (281)
..+.+||.+|..+|+|++|+..|++||.+ .|+++.+...+..+.
T Consensus 391 ~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~ 442 (490)
T 3n71_A 391 QLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRM 442 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 57999999999999999999999999985 678777666554443
No 173
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.00 E-value=1.1e-09 Score=91.02 Aligned_cols=73 Identities=18% Similarity=0.213 Sum_probs=68.7
Q ss_pred CCCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcC-----------CHH
Q 023491 3 SPAAPANKIERAHQLYRDGRY----------EEALGFYTEALSVAKIKQQKIALHSNRAACYLKLH-----------DFK 61 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy----------~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg-----------~y~ 61 (281)
+|.+++.+++.|.++...+++ ++|+..|+++|.+ +|....+|+++|.+|+.+| +|+
T Consensus 32 ~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l---dP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~ 108 (158)
T 1zu2_A 32 NPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLI---DPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFD 108 (158)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh---CcCcHHHHHHHHHHHHHhcccCcchhhhhccHH
Confidence 699999999999999998875 5999999999999 9999999999999999885 899
Q ss_pred HHHHHHHHHHHhcCCCH
Q 023491 62 KAAEECTSVLELDYNHT 78 (281)
Q Consensus 62 ~Ai~~~~~al~i~p~~~ 78 (281)
+|+.+|.+|++++|++.
T Consensus 109 eA~~~~~kAl~l~P~~~ 125 (158)
T 1zu2_A 109 LATQFFQQAVDEQPDNT 125 (158)
T ss_dssp HHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHhCCCCH
Confidence 99999999999999875
No 174
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.99 E-value=1.5e-09 Score=101.12 Aligned_cols=94 Identities=13% Similarity=0.107 Sum_probs=89.0
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHH
Q 023491 4 PAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALML 83 (281)
Q Consensus 4 P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~ 83 (281)
|.++..+.++|.+++..|+|.+|+.+|.++|.+ +|..+.+++++|.+|+.+|+|++|+.+|.++++++|.+..++..
T Consensus 270 ~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~---~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~ 346 (370)
T 1ihg_A 270 PVALSCVLNIGACKLKMSDWQGAVDSCLEALEI---DPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAE 346 (370)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh---CchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 456788999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHH
Q 023491 84 RAQTLVTLKEYNSALFD 100 (281)
Q Consensus 84 lg~a~~~~g~~~eAl~~ 100 (281)
++.++..++++.+|...
T Consensus 347 l~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 347 LLKVKQKIKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999888654
No 175
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.99 E-value=4.6e-09 Score=100.42 Aligned_cols=111 Identities=7% Similarity=0.057 Sum_probs=93.9
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhhh-----cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----cCCCH---
Q 023491 12 ERAHQLYRDGRYEEALGFYTEALSVAK-----IKQQKIALHSNRAACYLKLHDFKKAAEECTSVLEL-----DYNHT--- 78 (281)
Q Consensus 12 ~~G~~~~~~gdy~eAl~~y~~aL~~~~-----~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i-----~p~~~--- 78 (281)
+.+......|+|++|+.+|.++|.+.. .+|..+..+.|+|.+|..+|+|++|+..|.++|.+ .++++
T Consensus 303 e~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a 382 (433)
T 3qww_A 303 EEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVA 382 (433)
T ss_dssp HHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHH
T ss_pred HHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHH
Confidence 334444556899999999999998753 67788899999999999999999999999999977 34554
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHHHHHHHHH
Q 023491 79 GALMLRAQTLVTLKEYNSALFDVNRLIEL-----NPSSEVYQNLQARLK 122 (281)
Q Consensus 79 ~a~~~lg~a~~~~g~~~eAl~~~ekAL~l-----dP~~~~a~~~l~~l~ 122 (281)
..|++||.+|..+|+|++|+..|++|+.+ .|+++.+..+...|.
T Consensus 383 ~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~l~ 431 (433)
T 3qww_A 383 SMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQEIE 431 (433)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHh
Confidence 57999999999999999999999999996 688888877666553
No 176
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.99 E-value=4.1e-09 Score=80.21 Aligned_cols=87 Identities=11% Similarity=-0.010 Sum_probs=75.7
Q ss_pred CCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCC--CHH
Q 023491 2 ASPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYN--HTG 79 (281)
Q Consensus 2 a~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~--~~~ 79 (281)
.+|.++..++..|.+++..|+|.+|+..|.+++.+ +|....+++++|.+|+.+|++++|+..|.+++.+.|. +..
T Consensus 14 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~---~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 90 (115)
T 2kat_A 14 QGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDF---DPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQ 90 (115)
T ss_dssp TTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred hCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHH---CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHH
Confidence 36889999999999999999999999999999999 9999999999999999999999999999999999874 444
Q ss_pred HHHHHHHHHHHc
Q 023491 80 ALMLRAQTLVTL 91 (281)
Q Consensus 80 a~~~lg~a~~~~ 91 (281)
++..+..++..+
T Consensus 91 ~~~~l~~~l~~l 102 (115)
T 2kat_A 91 VVKELQVFLRRL 102 (115)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 555554444443
No 177
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.99 E-value=3.8e-09 Score=91.92 Aligned_cols=119 Identities=18% Similarity=0.109 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc---CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCC------
Q 023491 7 PANKIERAHQLYRDGRYEEALGFYTEALSVAKI---KQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNH------ 77 (281)
Q Consensus 7 a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~---~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~------ 77 (281)
+..+...|.+++..|++++|+.+|.+++.+.+. ......+++++|.+++.+|++++|+..|.+++.+.+..
T Consensus 183 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 262 (338)
T 3ro2_A 183 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVE 262 (338)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHH
Confidence 457888999999999999999999999988552 22345589999999999999999999999999887655
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHh
Q 023491 78 TGALMLRAQTLVTLKEYNSALFDVNRLIELNPSS------EVYQNLQARLKTQL 125 (281)
Q Consensus 78 ~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~------~~a~~~l~~l~~~l 125 (281)
..+++.+|.++..+|++++|+..|++++.+.+.. ..+...++.+...+
T Consensus 263 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~ 316 (338)
T 3ro2_A 263 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTAL 316 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHc
Confidence 7789999999999999999999999999986542 23455555555444
No 178
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.98 E-value=2.9e-09 Score=90.67 Aligned_cols=112 Identities=13% Similarity=0.079 Sum_probs=81.5
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcC----CHHHHHHHHHHHHHhcCCCHHH
Q 023491 5 AAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLH----DFKKAAEECTSVLELDYNHTGA 80 (281)
Q Consensus 5 ~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg----~y~~Ai~~~~~al~i~p~~~~a 80 (281)
.++.+++.+|..++..+++.+|+.+|++++.. .++.+++++|.+|+. + ++.+|+.+|.+++. +.++.+
T Consensus 16 g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~-----g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g~~~a 87 (212)
T 3rjv_A 16 GDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQ-----GDGDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AGSKSG 87 (212)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT-----TCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TTCHHH
T ss_pred CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CCCHHH
Confidence 46778888888888888888888888888764 356777777777776 5 77777777777743 457777
Q ss_pred HHHHHHHHHH----cCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHH
Q 023491 81 LMLRAQTLVT----LKEYNSALFDVNRLIELNP--SSEVYQNLQARLKTQ 124 (281)
Q Consensus 81 ~~~lg~a~~~----~g~~~eAl~~~ekAL~ldP--~~~~a~~~l~~l~~~ 124 (281)
++++|.+|.. .+++..|+.+|++++++.+ .++.+..+++.+...
T Consensus 88 ~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~ 137 (212)
T 3rjv_A 88 EIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYAS 137 (212)
T ss_dssp HHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHc
Confidence 7777777776 6777777777777777766 246666666666544
No 179
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.98 E-value=4.7e-09 Score=97.79 Aligned_cols=119 Identities=13% Similarity=0.050 Sum_probs=65.3
Q ss_pred CCCCHHHHHHHHHHHHHc-C-CHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHH--------HHHHHHHHHHH
Q 023491 3 SPAAPANKIERAHQLYRD-G-RYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFK--------KAAEECTSVLE 72 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~-g-dy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~--------~Ai~~~~~al~ 72 (281)
+|.+..++..++.++... + ++.+++.++.++|.. +|.+..+|+.|+.++.++|.+. +++..+.++|+
T Consensus 119 nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~---dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~ 195 (349)
T 3q7a_A 119 NLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLP---DPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLR 195 (349)
T ss_dssp TCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSS---CTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHH
Confidence 445555555555555444 4 455555555555554 5555555555555555555554 55555555555
Q ss_pred hcCCCHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 023491 73 LDYNHTGALMLRAQTLVTLKE-------YNSALFDVNRLIELNPSSEVYQNLQARLKTQ 124 (281)
Q Consensus 73 i~p~~~~a~~~lg~a~~~~g~-------~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~ 124 (281)
++|.+..+|..++.++..++. +++++.++.+++.++|+|..++..+..+...
T Consensus 196 ~dp~N~SAW~~R~~lL~~l~~~~~~~~~~~eELe~~~~aI~~~P~n~SaW~Ylr~Ll~~ 254 (349)
T 3q7a_A 196 VDGRNNSAWGWRWYLRVSRPGAETSSRSLQDELIYILKSIHLIPHNVSAWNYLRGFLKH 254 (349)
T ss_dssp HCTTCHHHHHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Confidence 555555555555555555554 4555555555555555555555555544444
No 180
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.98 E-value=4.1e-09 Score=89.79 Aligned_cols=115 Identities=12% Similarity=-0.044 Sum_probs=99.1
Q ss_pred CCCHHHHHHHHHHHHHcC----CHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhcC
Q 023491 4 PAAPANKIERAHQLYRDG----RYEEALGFYTEALSVAKIKQQKIALHSNRAACYLK----LHDFKKAAEECTSVLELDY 75 (281)
Q Consensus 4 P~~a~~l~~~G~~~~~~g----dy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~k----lg~y~~Ai~~~~~al~i~p 75 (281)
..++.+++.+|..++. + ++.+|+.+|.+++.. .++.+++++|.+|+. .+++.+|+.+|.+++...+
T Consensus 47 ~g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~-----g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~ 120 (212)
T 3rjv_A 47 QGDGDALALLAQLKIR-NPQQADYPQARQLAEKAVEA-----GSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSE 120 (212)
T ss_dssp TTCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHT-----TCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTT
T ss_pred cCCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHC-----CCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCC
Confidence 3577888999999887 6 899999999999664 578889999999988 8899999999999998887
Q ss_pred --CCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 023491 76 --NHTGALMLRAQTLVT----LKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQL 125 (281)
Q Consensus 76 --~~~~a~~~lg~a~~~----~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l 125 (281)
.++.++++||.+|.. .+++..|+.+|++++.+ +++..+..+++.+....
T Consensus 121 ~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~g 175 (212)
T 3rjv_A 121 SDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQQG 175 (212)
T ss_dssp SHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHHHC
T ss_pred CcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHcC
Confidence 358999999999999 88999999999999998 67777888888877553
No 181
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.97 E-value=5.1e-09 Score=97.51 Aligned_cols=122 Identities=13% Similarity=0.001 Sum_probs=114.4
Q ss_pred CCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHc-C-CHHHHHHHHHHHHHhcCCCHH
Q 023491 3 SPAAPANKIERAHQLYRDG-RYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKL-H-DFKKAAEECTSVLELDYNHTG 79 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~g-dy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~kl-g-~y~~Ai~~~~~al~i~p~~~~ 79 (281)
+|.+..++..++.++...| .+.+++.++..+|.. +|.+..+|+.|+.++.++ + ++.+++..|.++|.++|.+..
T Consensus 84 nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~---nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~ 160 (349)
T 3q7a_A 84 NPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQ---NLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYH 160 (349)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHT---TCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHH
T ss_pred CchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHh---CCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHH
Confidence 7899999999999999999 599999999999998 999999999999999998 8 999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHH--------HHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhc
Q 023491 80 ALMLRAQTLVTLKEYN--------SALFDVNRLIELNPSSEVYQNLQARLKTQLSL 127 (281)
Q Consensus 80 a~~~lg~a~~~~g~~~--------eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~~ 127 (281)
+|+.++.++..+|.+. +++.++.++++++|.|-.++..+..+...+..
T Consensus 161 AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~ 216 (349)
T 3q7a_A 161 TWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPG 216 (349)
T ss_dssp HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTT
T ss_pred HHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccc
Confidence 9999999999999888 99999999999999999999999988766643
No 182
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.97 E-value=1.6e-09 Score=98.98 Aligned_cols=121 Identities=18% Similarity=0.151 Sum_probs=99.6
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcC---cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCC-----
Q 023491 6 APANKIERAHQLYRDGRYEEALGFYTEALSVAKIK---QQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNH----- 77 (281)
Q Consensus 6 ~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~---p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~----- 77 (281)
.+..+...|.+++..|+|++|+.+|.+++.+.+.. .....+++++|.+|+.+|++++|+..|.+++.+.+..
T Consensus 222 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 301 (411)
T 4a1s_A 222 QGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREV 301 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHH
Confidence 35578899999999999999999999999985421 2234589999999999999999999999999988754
Q ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHhh
Q 023491 78 -TGALMLRAQTLVTLKEYNSALFDVNRLIELNPSS------EVYQNLQARLKTQLS 126 (281)
Q Consensus 78 -~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~------~~a~~~l~~l~~~l~ 126 (281)
..+++.+|.++..+|++++|+..|++++.+.+.. ..+...++.+...++
T Consensus 302 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g 357 (411)
T 4a1s_A 302 EAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIG 357 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhc
Confidence 6789999999999999999999999999986542 335555665555443
No 183
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.96 E-value=5.2e-09 Score=79.16 Aligned_cols=84 Identities=14% Similarity=0.054 Sum_probs=76.3
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-------HHHH
Q 023491 43 KIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSS-------EVYQ 115 (281)
Q Consensus 43 ~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~-------~~a~ 115 (281)
.+..++.+|.+++..|+|++|+..|.+++.++|.++.+++++|.++..+|++.+|+..|++++.+.|.+ ..+.
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAY 82 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHH
Confidence 467789999999999999999999999999999999999999999999999999999999999998876 7777
Q ss_pred HHHHHHHHHhh
Q 023491 116 NLQARLKTQLS 126 (281)
Q Consensus 116 ~~l~~l~~~l~ 126 (281)
..++.+...++
T Consensus 83 ~~la~~~~~~~ 93 (131)
T 1elr_A 83 ARIGNSYFKEE 93 (131)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHhc
Confidence 77777766543
No 184
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.95 E-value=1e-08 Score=78.18 Aligned_cols=80 Identities=11% Similarity=0.066 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhc-------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 023491 46 LHSNRAACYLKLHDFKKAAEECTSVLELD-------YNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQ 118 (281)
Q Consensus 46 a~~nra~~~~klg~y~~Ai~~~~~al~i~-------p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l 118 (281)
-++.+|..++..|+|..|+.+|..|+... .....++..+|.+++++|++..|+..++++++++|++..+..++
T Consensus 7 dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~n~ 86 (104)
T 2v5f_A 7 DCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNL 86 (104)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHhhH
Confidence 34445555555555555555555555432 23455666777777777777777777777777777776666666
Q ss_pred HHHHHHh
Q 023491 119 ARLKTQL 125 (281)
Q Consensus 119 ~~l~~~l 125 (281)
..++..+
T Consensus 87 ~~~~~~~ 93 (104)
T 2v5f_A 87 KYFEYIM 93 (104)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6555544
No 185
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.94 E-value=6.4e-09 Score=78.51 Aligned_cols=83 Identities=14% Similarity=0.094 Sum_probs=71.3
Q ss_pred CcccHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q 023491 40 KQQKIALHSNRAACYLKLHD---FKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQN 116 (281)
Q Consensus 40 ~p~~~~a~~nra~~~~klg~---y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~ 116 (281)
+|.++.+++.+|.+++..++ ..+|...+.+++.++|+++.+++.+|.+++..|+|.+|+..|++++..+|..+....
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~~~~ 81 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLDRVT 81 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCCHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHH
Confidence 67888999999999987666 799999999999999999999999999999999999999999999999998544444
Q ss_pred HHHHHH
Q 023491 117 LQARLK 122 (281)
Q Consensus 117 ~l~~l~ 122 (281)
....|.
T Consensus 82 i~~~I~ 87 (93)
T 3bee_A 82 IIESIN 87 (93)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
No 186
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.93 E-value=8.6e-09 Score=84.65 Aligned_cols=104 Identities=13% Similarity=-0.003 Sum_probs=89.7
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCc----ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcC--CC--
Q 023491 6 APANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQ----QKIALHSNRAACYLKLHDFKKAAEECTSVLELDY--NH-- 77 (281)
Q Consensus 6 ~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p----~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p--~~-- 77 (281)
.+..+...|.+++..|+|.+|+.+|.+++.+....+ ....+++++|.+++.+|++++|+..|.+++.+.+ .+
T Consensus 65 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 144 (203)
T 3gw4_A 65 EHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQV 144 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchH
Confidence 466788999999999999999999999999865332 4577899999999999999999999999997643 22
Q ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 023491 78 --TGALMLRAQTLVTLKEYNSALFDVNRLIELNP 109 (281)
Q Consensus 78 --~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP 109 (281)
..++.++|.++..+|++++|+..|++++.+..
T Consensus 145 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 145 AIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 24678999999999999999999999999854
No 187
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.90 E-value=2e-08 Score=95.74 Aligned_cols=116 Identities=12% Similarity=0.146 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhh-----hcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc-----CCCH
Q 023491 9 NKIERAHQLYRDGRYEEALGFYTEALSVA-----KIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELD-----YNHT 78 (281)
Q Consensus 9 ~l~~~G~~~~~~gdy~eAl~~y~~aL~~~-----~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~-----p~~~ 78 (281)
........+..+|+|++|+..|.++|... +.+|..+..+.++|.+|..+|+|++|+..|.++|.+. +.++
T Consensus 289 ~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp 368 (429)
T 3qwp_A 289 ESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHP 368 (429)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCH
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCCh
Confidence 34455567788999999999999999764 2677789999999999999999999999999998773 4554
Q ss_pred ---HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHHH
Q 023491 79 ---GALMLRAQTLVTLKEYNSALFDVNRLIEL-----NPSSEVYQNLQARLKTQ 124 (281)
Q Consensus 79 ---~a~~~lg~a~~~~g~~~eAl~~~ekAL~l-----dP~~~~a~~~l~~l~~~ 124 (281)
..+++||.+|..+|+|++|+..|++|+.+ .|+++.+...+..+...
T Consensus 369 ~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~ 422 (429)
T 3qwp_A 369 VRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEEC 422 (429)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Confidence 57999999999999999999999999986 67887777665554443
No 188
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.90 E-value=1.7e-08 Score=96.96 Aligned_cols=118 Identities=9% Similarity=-0.060 Sum_probs=102.3
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKI-ALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGAL 81 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~-~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~ 81 (281)
+|.++..++..|..+...|++++|..+|.+++.. .|.++ .+|.++|.++.+.|+++.|+..|.+++...|.....+
T Consensus 317 ~p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~---~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~ 393 (530)
T 2ooe_A 317 LKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAI---EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVY 393 (530)
T ss_dssp CSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS---SSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHH
T ss_pred CcccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCc---cccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHH
Confidence 6889999999999999999999999999999998 77764 5899999999999999999999999999888887777
Q ss_pred HHHHHH-HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 023491 82 MLRAQT-LVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKT 123 (281)
Q Consensus 82 ~~lg~a-~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~ 123 (281)
+..|.+ +...|+++.|+..|++++++.|++..++..+..+..
T Consensus 394 ~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~ 436 (530)
T 2ooe_A 394 VTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 436 (530)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 776665 346899999999999999999998888877766543
No 189
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.90 E-value=2.6e-08 Score=75.94 Aligned_cols=82 Identities=18% Similarity=0.119 Sum_probs=74.9
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc----CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHH
Q 023491 4 PAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKI----KQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTG 79 (281)
Q Consensus 4 P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~----~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~ 79 (281)
.+++..++..|..+|..|+|..|+..|..|+..... ......++.++|.|++++|+++.|+..+.+++.++|++..
T Consensus 2 ~Lsa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~ 81 (104)
T 2v5f_A 2 FLTAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQR 81 (104)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred CCCHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHH
Confidence 478999999999999999999999999999997542 2356889999999999999999999999999999999999
Q ss_pred HHHHHH
Q 023491 80 ALMLRA 85 (281)
Q Consensus 80 a~~~lg 85 (281)
++.+++
T Consensus 82 ~~~n~~ 87 (104)
T 2v5f_A 82 ANGNLK 87 (104)
T ss_dssp HHHHHH
T ss_pred HHhhHH
Confidence 988887
No 190
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.80 E-value=4.4e-08 Score=94.03 Aligned_cols=112 Identities=14% Similarity=0.057 Sum_probs=101.6
Q ss_pred CCCCHHHHHHHHHHHHH-------cCCHH-------HHHHHHHHHHH-hhhcCcccHHHHHHHHHHHHHcCCHHHHHHHH
Q 023491 3 SPAAPANKIERAHQLYR-------DGRYE-------EALGFYTEALS-VAKIKQQKIALHSNRAACYLKLHDFKKAAEEC 67 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~-------~gdy~-------eAl~~y~~aL~-~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~ 67 (281)
+|.++..|+..|..+.. .|++. +|+..|.+++. + .|....+++++|.++.+.|++++|+..|
T Consensus 268 ~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~---~p~~~~l~~~~~~~~~~~g~~~~A~~~~ 344 (530)
T 2ooe_A 268 LGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTL---LKKNMLLYFAYADYEESRMKYEKVHSIY 344 (530)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTT---CSSCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHh---CcccHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 47899999999999886 79987 99999999997 7 7889999999999999999999999999
Q ss_pred HHHHHhcCCCH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 023491 68 TSVLELDYNHT-GALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNL 117 (281)
Q Consensus 68 ~~al~i~p~~~-~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~ 117 (281)
.+++.+.|.++ .+|..+|.++.+.|+++.|+..|++|++..|....+...
T Consensus 345 ~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~ 395 (530)
T 2ooe_A 345 NRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVT 395 (530)
T ss_dssp HHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHH
T ss_pred HHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHH
Confidence 99999999885 699999999999999999999999999998876554443
No 191
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.79 E-value=1.4e-07 Score=85.39 Aligned_cols=116 Identities=14% Similarity=0.035 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCc---ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc--------CCC
Q 023491 9 NKIERAHQLYRDGRYEEALGFYTEALSVAKIKQ---QKIALHSNRAACYLKLHDFKKAAEECTSVLELD--------YNH 77 (281)
Q Consensus 9 ~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p---~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~--------p~~ 77 (281)
.+...|..++..|+|++|+..|.+++.+.+... ....+++++|.+++..|+|.+|+..|.+++.+. +..
T Consensus 55 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~ 134 (373)
T 1hz4_A 55 ATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMH 134 (373)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHH
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHH
Confidence 567788888899999999999999988755222 224557889999999999999999999988875 234
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHH
Q 023491 78 TGALMLRAQTLVTLKEYNSALFDVNRLIELNPSS-----EVYQNLQARLKTQ 124 (281)
Q Consensus 78 ~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~-----~~a~~~l~~l~~~ 124 (281)
..++.++|.+++..|++++|+..|++++.+.+.. ..+...++.+...
T Consensus 135 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~ 186 (373)
T 1hz4_A 135 EFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLA 186 (373)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHH
Confidence 5677888999999999999999999999887752 2344444444433
No 192
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.77 E-value=2e-08 Score=90.95 Aligned_cols=117 Identities=11% Similarity=0.043 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCC--HHHHHHHH
Q 023491 8 ANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNH--TGALMLRA 85 (281)
Q Consensus 8 ~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~--~~a~~~lg 85 (281)
......|..+...|+|++|...|..++.. .|... +++.+|.++++.++|.+|+..|..++...... ..+++++|
T Consensus 103 dl~LayA~~L~~~g~y~eA~~~l~~~~~~---~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG 178 (282)
T 4f3v_A 103 AITMGFAACEAAQGNYADAMEALEAAPVA---GSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHG 178 (282)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTSSCCT---TCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhc---CCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHH
Confidence 45567889999999999999999999887 88888 99999999999999999999999886653222 35899999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhC--CC-CHHHHHHHHHHHHHhhcC
Q 023491 86 QTLVTLKEYNSALFDVNRLIELN--PS-SEVYQNLQARLKTQLSLA 128 (281)
Q Consensus 86 ~a~~~~g~~~eAl~~~ekAL~ld--P~-~~~a~~~l~~l~~~l~~~ 128 (281)
.++..+|++++|+.+|++++... |. ...+...++.+...++..
T Consensus 179 ~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~ 224 (282)
T 4f3v_A 179 VAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNE 224 (282)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCH
Confidence 99999999999999999998654 54 556778888887776644
No 193
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.75 E-value=1.2e-07 Score=75.61 Aligned_cols=98 Identities=13% Similarity=0.077 Sum_probs=85.0
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 023491 13 RAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLK----LHDFKKAAEECTSVLELDYNHTGALMLRAQTL 88 (281)
Q Consensus 13 ~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~k----lg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~ 88 (281)
+|..++..+.+.+|+.+|.+++.. .++.+++++|.+|+. .+++.+|+.+|+++.+. .++.+++++|.+|
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~-----g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y 103 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL-----NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQ 103 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC-----CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHH
Confidence 788888888899999999999886 467899999999999 89999999999999876 6899999999999
Q ss_pred HH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 023491 89 VT----LKEYNSALFDVNRLIELNPSSEVYQNLQA 119 (281)
Q Consensus 89 ~~----~g~~~eAl~~~ekAL~ldP~~~~a~~~l~ 119 (281)
.. .+++..|+.+|+++.++ ++..+..+++
T Consensus 104 ~~G~g~~~d~~~A~~~~~~Aa~~--g~~~A~~~l~ 136 (138)
T 1klx_A 104 YAGKGVVKNEKQAVKTFEKACRL--GSEDACGILN 136 (138)
T ss_dssp HHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHC-
T ss_pred HCCCCCCcCHHHHHHHHHHHHHC--CCHHHHHHHh
Confidence 99 99999999999999988 4555555443
No 194
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.70 E-value=1.7e-07 Score=74.78 Aligned_cols=104 Identities=13% Similarity=0.103 Sum_probs=89.9
Q ss_pred CCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHH---HHHHHHHHHHhc-C-CCHHHHHHHHHHHHHcCCHH
Q 023491 21 GRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKK---AAEECTSVLELD-Y-NHTGALMLRAQTLVTLKEYN 95 (281)
Q Consensus 21 gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~---Ai~~~~~al~i~-p-~~~~a~~~lg~a~~~~g~~~ 95 (281)
.....+...|...+.. ++....+.|++|.|+.+...-.. +|..++.+++.+ | ..-.++|.+|..++++|+|.
T Consensus 15 ~~l~~~~~~y~~e~~~---~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~ 91 (126)
T 1nzn_A 15 EDLLKFEKKFQSEKAA---GSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYE 91 (126)
T ss_dssp HHHHHHHHHHHHHHHH---SCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHhcc---CCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHH
Confidence 3455566677777776 77889999999999999887666 999999998876 4 46679999999999999999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhc
Q 023491 96 SALFDVNRLIELNPSSEVYQNLQARLKTQLSL 127 (281)
Q Consensus 96 eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~~ 127 (281)
.|+.+++.+|++.|+|..+..+...|...+..
T Consensus 92 ~A~~~~~~lL~~eP~n~QA~~Lk~~i~~~i~k 123 (126)
T 1nzn_A 92 KALKYVRGLLQTEPQNNQAKELERLIDKAMKK 123 (126)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999887653
No 195
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.69 E-value=3.3e-08 Score=95.91 Aligned_cols=106 Identities=12% Similarity=-0.002 Sum_probs=93.5
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh-----cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAK-----IKQQKIALHSNRAACYLKLHDFKKAAEECTSVLEL---- 73 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~-----~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i---- 73 (281)
+|..+..+.++|..|..+|+|++|+.+|.++|.+.. .+|..+..++|+|.+|..+|+|++|+..|.+|+.+
T Consensus 347 Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~ 426 (490)
T 3n71_A 347 NLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVT 426 (490)
T ss_dssp SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 456678889999999999999999999999998763 77888999999999999999999999999999876
Q ss_pred -cCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 023491 74 -DYNHT---GALMLRAQTLVTLKEYNSALFDVNRLIELN 108 (281)
Q Consensus 74 -~p~~~---~a~~~lg~a~~~~g~~~eAl~~~ekAL~ld 108 (281)
.++++ ..+-+++.++..++.|++|...|+++.+-.
T Consensus 427 lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 427 HGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAA 465 (490)
T ss_dssp TCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46665 467788999999999999999999886543
No 196
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.68 E-value=2.2e-07 Score=84.18 Aligned_cols=102 Identities=18% Similarity=0.128 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc-----CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCC-----C
Q 023491 8 ANKIERAHQLYRDGRYEEALGFYTEALSVAKI-----KQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYN-----H 77 (281)
Q Consensus 8 ~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~-----~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~-----~ 77 (281)
..+...|..++..|+|.+|+.+|.+++..... .+....++.++|.+++.+|++++|+..|.+++.+.+. .
T Consensus 94 ~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 173 (373)
T 1hz4_A 94 WSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQ 173 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGG
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHH
Confidence 44678999999999999999999999998641 1456778899999999999999999999999998875 3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 023491 78 TGALMLRAQTLVTLKEYNSALFDVNRLIELNP 109 (281)
Q Consensus 78 ~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP 109 (281)
..+++.+|.++...|++.+|+..|++++.+.+
T Consensus 174 ~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~ 205 (373)
T 1hz4_A 174 LQCLAMLIQCSLARGDLDNARSQLNRLENLLG 205 (373)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHh
Confidence 56899999999999999999999999998843
No 197
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.65 E-value=1.6e-07 Score=89.15 Aligned_cols=108 Identities=14% Similarity=0.090 Sum_probs=66.4
Q ss_pred CHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhcCCCH
Q 023491 6 APANKIERAHQLYRDG---RYEEALGFYTEALSVAKIKQQKIALHSNRAACYLK----LHDFKKAAEECTSVLELDYNHT 78 (281)
Q Consensus 6 ~a~~l~~~G~~~~~~g---dy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~k----lg~y~~Ai~~~~~al~i~p~~~ 78 (281)
++.+++.+|..++..| ++.+|+.+|.+++.. .++.+++++|.+|+. .+++.+|+.+|.++++. .++
T Consensus 327 ~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~-----~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~--~~~ 399 (490)
T 2xm6_A 327 DATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK-----GEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQ--GLS 399 (490)
T ss_dssp CHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCH
T ss_pred CHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC-----CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhC--CCH
Confidence 3445555565555544 556666666666553 245666667766666 66777777777776654 356
Q ss_pred HHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCC---CHHHHHHHHH
Q 023491 79 GALMLRAQTLVT----LKEYNSALFDVNRLIELNPS---SEVYQNLQAR 120 (281)
Q Consensus 79 ~a~~~lg~a~~~----~g~~~eAl~~~ekAL~ldP~---~~~a~~~l~~ 120 (281)
.+++++|.+|.. .+++.+|+.+|++++.++|+ +..+..+++.
T Consensus 400 ~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~~a~~~l~~ 448 (490)
T 2xm6_A 400 AAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMNLFGTENRNITEKK 448 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCCCcCCHHHHHHHHh
Confidence 667777777766 66777777777777776633 5555444433
No 198
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.60 E-value=1.2e-06 Score=82.99 Aligned_cols=111 Identities=8% Similarity=-0.014 Sum_probs=74.3
Q ss_pred CCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhcC
Q 023491 4 PAAPANKIERAHQLYR----DGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLK----LHDFKKAAEECTSVLELDY 75 (281)
Q Consensus 4 P~~a~~l~~~G~~~~~----~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~k----lg~y~~Ai~~~~~al~i~p 75 (281)
+.++.+++..|..++. .+++.+|+..|.+++.. .++.+++.+|.+|+. .+++.+|+.+|.+++..
T Consensus 36 ~g~~~a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~-----~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~-- 108 (490)
T 2xm6_A 36 SGEAKAQLELGYRYFQGNETTKDLTQAMDWFRRAAEQ-----GYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK-- 108 (490)
T ss_dssp TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--
T ss_pred CCCHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHC-----CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--
Confidence 3466677777777776 67777777777777664 345667777777777 67777777777777654
Q ss_pred CCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 023491 76 NHTGALMLRAQTLVT----LKEYNSALFDVNRLIELNPSSEVYQNLQARLKT 123 (281)
Q Consensus 76 ~~~~a~~~lg~a~~~----~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~ 123 (281)
.++.+++++|.+|.. .+++.+|+.+|++++.. ++..+...++.+..
T Consensus 109 ~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~ 158 (490)
T 2xm6_A 109 GLPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--GRDSGQQSMGDAYF 158 (490)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH
Confidence 466677777777766 66777777777776654 45556666665543
No 199
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.59 E-value=3e-07 Score=69.23 Aligned_cols=72 Identities=17% Similarity=0.128 Sum_probs=68.1
Q ss_pred CCCCHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCC
Q 023491 3 SPAAPANKIERAHQLYRDGR---YEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNH 77 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gd---y~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~ 77 (281)
+|.++..+...|.+++..++ ..+|..+|.++|.+ +|.+..+++.+|..+++.|+|.+|+..+++++..+|..
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~---dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQL---EPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHH---CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 68999999999999987766 79999999999999 99999999999999999999999999999999999874
No 200
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.58 E-value=2.9e-07 Score=87.39 Aligned_cols=110 Identities=13% Similarity=-0.027 Sum_probs=75.0
Q ss_pred CHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHhcCCCH
Q 023491 6 APANKIERAHQLYRDG---RYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKL----HDFKKAAEECTSVLELDYNHT 78 (281)
Q Consensus 6 ~a~~l~~~G~~~~~~g---dy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~kl----g~y~~Ai~~~~~al~i~p~~~ 78 (281)
++.+++.+|..+...| ++.+|+..|.+++.. .+..+.+++++|.+|... +++.+|+.+|.++. +.++
T Consensus 175 ~~~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~---g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~ 248 (452)
T 3e4b_A 175 TDICYVELATVYQKKQQPEQQAELLKQMEAGVSR---GTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYP 248 (452)
T ss_dssp CTTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT---TCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGST
T ss_pred CHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHC---CCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCH
Confidence 4446777888888888 888888888888877 677777667777777554 56777777777765 5666
Q ss_pred HHHHHHHHH-H--HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 023491 79 GALMLRAQT-L--VTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKT 123 (281)
Q Consensus 79 ~a~~~lg~a-~--~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~ 123 (281)
.+++++|.+ + ...+++.+|+.+|+++++. ++..+..+++.+..
T Consensus 249 ~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~ 294 (452)
T 3e4b_A 249 ASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA--DQPRAELLLGKLYY 294 (452)
T ss_dssp HHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH
Confidence 666777666 3 3456666666666666644 35556666655554
No 201
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.51 E-value=8.4e-07 Score=73.09 Aligned_cols=83 Identities=16% Similarity=0.143 Sum_probs=75.0
Q ss_pred CCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhhhcC-c-ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCC
Q 023491 3 SPAAPANKIERAHQLYRDG---RYEEALGFYTEALSVAKIK-Q-QKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNH 77 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~g---dy~eAl~~y~~aL~~~~~~-p-~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~ 77 (281)
++.+.+..++.|.++.+.+ ++.+++.+|+..+.. + | ....++|++|..|+++|+|.+|+.+|+.+|+++|+|
T Consensus 28 ~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~---~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n 104 (152)
T 1pc2_A 28 GSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPK---GSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQN 104 (152)
T ss_dssp TCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTC
T ss_pred CCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc---CCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC
Confidence 5678999999999999988 778999999999998 6 6 568999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 023491 78 TGALMLRAQTL 88 (281)
Q Consensus 78 ~~a~~~lg~a~ 88 (281)
..+...+-.+-
T Consensus 105 ~QA~~Lk~~ie 115 (152)
T 1pc2_A 105 NQAKELERLID 115 (152)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99877766554
No 202
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.50 E-value=2.9e-06 Score=79.43 Aligned_cols=105 Identities=12% Similarity=0.078 Sum_probs=81.5
Q ss_pred CHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhhhcCcccHHHHHH---------------------------------
Q 023491 6 APANKIERAHQLYRDGR---YEEALGFYTEALSVAKIKQQKIALHSN--------------------------------- 49 (281)
Q Consensus 6 ~a~~l~~~G~~~~~~gd---y~eAl~~y~~aL~~~~~~p~~~~a~~n--------------------------------- 49 (281)
++-.++.+|..++..+. +.+|+.+|++||.+ +|..+.++..
T Consensus 195 ~Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~l---DP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~ 271 (372)
T 3ly7_A 195 ALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQS---SPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLP 271 (372)
T ss_dssp GGHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCG
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcc
Confidence 34455677777776544 47788888888887 6655555543
Q ss_pred -----------HHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 023491 50 -----------RAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVY 114 (281)
Q Consensus 50 -----------ra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a 114 (281)
+|.+++..|+++.|+..+.+++.++| +..+|..+|.++...|++++|+..|.+|+.++|..+..
T Consensus 272 ~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~-s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t~ 346 (372)
T 3ly7_A 272 ELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEM-SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTL 346 (372)
T ss_dssp GGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHHH
T ss_pred cCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcChH
Confidence 44445557999999999999999996 57788899999999999999999999999999987643
No 203
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.43 E-value=1.4e-06 Score=82.73 Aligned_cols=109 Identities=16% Similarity=0.042 Sum_probs=87.0
Q ss_pred CCCHHHHHHHHHHH---HHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHHhcC
Q 023491 4 PAAPANKIERAHQL---YRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLH-----DFKKAAEECTSVLELDY 75 (281)
Q Consensus 4 P~~a~~l~~~G~~~---~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg-----~y~~Ai~~~~~al~i~p 75 (281)
|.++.+++.+|..+ ...+++.+|+.+|.+++.. . ++.+++++|.+|+ .| ++.+|+.+|.+++ +
T Consensus 245 ~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~---g--~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~ 315 (452)
T 3e4b_A 245 PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA---D--QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---G 315 (452)
T ss_dssp GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT---T--CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---T
T ss_pred CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC---C--CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---C
Confidence 55777888888884 4578999999999998875 3 6888899999888 55 8999999999988 8
Q ss_pred CCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 023491 76 NHTGALMLRAQTLVT----LKEYNSALFDVNRLIELNPSSEVYQNLQARLKT 123 (281)
Q Consensus 76 ~~~~a~~~lg~a~~~----~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~ 123 (281)
.++.+++++|.+|.. ..++.+|+.+|+++.+. ++..+..+++.+..
T Consensus 316 g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~ 365 (452)
T 3e4b_A 316 REVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARN--GQNSADFAIAQLFS 365 (452)
T ss_dssp TCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTT--TCTTHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhh--ChHHHHHHHHHHHH
Confidence 889999999988876 44899999999988764 45566666666654
No 204
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.37 E-value=3.6e-06 Score=66.92 Aligned_cols=93 Identities=11% Similarity=0.003 Sum_probs=82.7
Q ss_pred CCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH----cCCHHH
Q 023491 21 GRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVT----LKEYNS 96 (281)
Q Consensus 21 gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~----~g~~~e 96 (281)
+++.+|+.+|.++... ....+. +|.+|+..+.+.+|+.+|.++... .++.+++++|.+|.. .+++..
T Consensus 9 ~d~~~A~~~~~~aa~~---g~~~a~----lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~ 79 (138)
T 1klx_A 9 KDLKKAIQYYVKACEL---NEMFGC----LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRK 79 (138)
T ss_dssp HHHHHHHHHHHHHHHT---TCTTHH----HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHH
T ss_pred cCHHHHHHHHHHHHcC---CCHhhh----HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHH
Confidence 5789999999999997 543333 999999999999999999999886 689999999999999 899999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 023491 97 ALFDVNRLIELNPSSEVYQNLQARLKTQ 124 (281)
Q Consensus 97 Al~~~ekAL~ldP~~~~a~~~l~~l~~~ 124 (281)
|+.+|+++.+. +++.+..+++.+...
T Consensus 80 A~~~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 80 AAQYYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcC--CCHHHHHHHHHHHHC
Confidence 99999999987 788899999888765
No 205
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=98.34 E-value=4.2e-06 Score=67.18 Aligned_cols=87 Identities=17% Similarity=0.121 Sum_probs=77.9
Q ss_pred CcccHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 023491 40 KQQKIALHSNRAACYLKLHD---FKKAAEECTSVLELDYN-HTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQ 115 (281)
Q Consensus 40 ~p~~~~a~~nra~~~~klg~---y~~Ai~~~~~al~i~p~-~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~ 115 (281)
....+.+.|++|.|+.+... ..++|..++.+++..|. .-.++|.+|..++++|+|..|+.+.+.+|++.|+|..+.
T Consensus 36 ~~vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~ 115 (134)
T 3o48_A 36 PTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVG 115 (134)
T ss_dssp GGSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred CCCChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHH
Confidence 55677889999999998775 45799999999998884 578999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh
Q 023491 116 NLQARLKTQLS 126 (281)
Q Consensus 116 ~~l~~l~~~l~ 126 (281)
.+...|...+.
T Consensus 116 ~Lk~~Ie~ki~ 126 (134)
T 3o48_A 116 ALKSMVEDKIQ 126 (134)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988765
No 206
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.30 E-value=2e-05 Score=63.99 Aligned_cols=88 Identities=17% Similarity=0.114 Sum_probs=78.6
Q ss_pred cccHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q 023491 41 QQKIALHSNRAACYLKLHD---FKKAAEECTSVLELDYN-HTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQN 116 (281)
Q Consensus 41 p~~~~a~~nra~~~~klg~---y~~Ai~~~~~al~i~p~-~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~ 116 (281)
.....+.|++|.|+.+... ..++|..++.+++..|. .-.++|.+|..++++|+|..|+.+.+.+|++.|+|..+..
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~ 115 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGA 115 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHH
Confidence 4578888999999998775 45799999999998884 5679999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 023491 117 LQARLKTQLSLA 128 (281)
Q Consensus 117 ~l~~l~~~l~~~ 128 (281)
+...|...+...
T Consensus 116 Lk~~Ie~~i~kd 127 (144)
T 1y8m_A 116 LKSMVEDKIQKE 127 (144)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 999999887644
No 207
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.21 E-value=4.9e-06 Score=76.36 Aligned_cols=103 Identities=12% Similarity=0.052 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------------------------------hh---cCccc
Q 023491 7 PANKIERAHQLYRDGRYEEALGFYTEALSV----------------------------------------AK---IKQQK 43 (281)
Q Consensus 7 a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~----------------------------------------~~---~~p~~ 43 (281)
..++...|..++..|+|++|+.+|.+++.+ .. .....
T Consensus 55 ~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 134 (434)
T 4b4t_Q 55 ETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLK 134 (434)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHH
Confidence 345566666777777776666666665443 11 22344
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 023491 44 IALHSNRAACYLKLHDFKKAAEECTSVLELD------YNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNP 109 (281)
Q Consensus 44 ~~a~~nra~~~~klg~y~~Ai~~~~~al~i~------p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP 109 (281)
+.++.++|.+|+.+|+|.+|+..+..++... +....++..+|.+|..+|+|..|...|++++.+.+
T Consensus 135 ~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~ 206 (434)
T 4b4t_Q 135 HSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAAN 206 (434)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhh
Confidence 7788999999999999999999999998762 33457899999999999999999999999998754
No 208
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.21 E-value=2.2e-05 Score=71.77 Aligned_cols=112 Identities=11% Similarity=0.019 Sum_probs=89.6
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCc--ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCC----CH
Q 023491 5 AAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQ--QKIALHSNRAACYLKLHDFKKAAEECTSVLELDYN----HT 78 (281)
Q Consensus 5 ~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p--~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~----~~ 78 (281)
.+...++..|..++..|++++|+..+.+.|.. ++ ....++..++.+++++|+++.|.+.+.++.+.+|+ .-
T Consensus 98 ~~~~~~~~la~i~~~~g~~eeAL~~l~~~i~~---~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d 174 (310)
T 3mv2_B 98 NSPYELYLLATAQAILGDLDKSLETCVEGIDN---DEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDN 174 (310)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTS---SCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred CCcHHHHHHHHHHHHcCCHHHHHHHHHHHhcc---CCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccch
Confidence 34556678999999999999999999999887 65 78999999999999999999999999999999883 22
Q ss_pred HHHHHH--HHHHHHcC--CHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 023491 79 GALMLR--AQTLVTLK--EYNSALFDVNRLIELNPSSEVYQNLQA 119 (281)
Q Consensus 79 ~a~~~l--g~a~~~~g--~~~eAl~~~ekAL~ldP~~~~a~~~l~ 119 (281)
..+..+ |.+.+..| ++++|+..|++++...|++.....++.
T Consensus 175 ~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln 219 (310)
T 3mv2_B 175 EMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN 219 (310)
T ss_dssp HHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH
Confidence 333444 54466666 999999999999888887444333343
No 209
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.18 E-value=1.1e-05 Score=74.09 Aligned_cols=102 Identities=18% Similarity=0.183 Sum_probs=88.1
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh---cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcC---CC--
Q 023491 6 APANKIERAHQLYRDGRYEEALGFYTEALSVAK---IKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDY---NH-- 77 (281)
Q Consensus 6 ~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~---~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p---~~-- 77 (281)
-+..+...|..++..|+|.+|+.++.+++.... ..+....++.++|.+|+.+|+|.+|...|.+++.+.+ ..
T Consensus 134 ~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~ 213 (434)
T 4b4t_Q 134 KHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQ 213 (434)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchH
Confidence 356778899999999999999999999988754 3456688999999999999999999999999987753 22
Q ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 78 --TGALMLRAQTLVTLKEYNSALFDVNRLIEL 107 (281)
Q Consensus 78 --~~a~~~lg~a~~~~g~~~eAl~~~ekAL~l 107 (281)
...+..+|.++...|+|..|..+|..+++.
T Consensus 214 ~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~ 245 (434)
T 4b4t_Q 214 TVAELDLMSGILHCEDKDYKTAFSYFFESFES 245 (434)
T ss_dssp HHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 356788899999999999999999999875
No 210
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.18 E-value=5e-06 Score=75.36 Aligned_cols=105 Identities=11% Similarity=0.043 Sum_probs=90.3
Q ss_pred CCCCHHHHHHHHHHHHH-----cC------CHHHHHHHHHHHHHhhhcCcc--cHHHHHHHHHHHHHc-----CCHHHHH
Q 023491 3 SPAAPANKIERAHQLYR-----DG------RYEEALGFYTEALSVAKIKQQ--KIALHSNRAACYLKL-----HDFKKAA 64 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~-----~g------dy~eAl~~y~~aL~~~~~~p~--~~~a~~nra~~~~kl-----g~y~~Ai 64 (281)
+|.+++.++=.|..... .| ....|...++++|.+ +|. +..+|..+|..|++. |+.++|.
T Consensus 148 ~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleL---DP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~ 224 (301)
T 3u64_A 148 TRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDL---WPSYQEGAVWNVLTKFYAAAPESFGGGMEKAH 224 (301)
T ss_dssp CGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHH---CTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHH
T ss_pred CccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHh---CCCcccCHHHHHHHHHHHhCCCccCCCHHHHH
Confidence 46677777766655533 13 347888999999999 988 677999999999995 9999999
Q ss_pred HHHHHHHHhcCCC-HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCC
Q 023491 65 EECTSVLELDYNH-TGALMLRAQTLVT-LKEYNSALFDVNRLIELNPS 110 (281)
Q Consensus 65 ~~~~~al~i~p~~-~~a~~~lg~a~~~-~g~~~eAl~~~ekAL~ldP~ 110 (281)
.+|+++|+++|+. ..+++..|..++. .|+++.|...++++|..+|.
T Consensus 225 ~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 225 TAFEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPE 272 (301)
T ss_dssp HHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGG
T ss_pred HHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCC
Confidence 9999999999975 9999999999988 59999999999999998776
No 211
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.14 E-value=1.7e-05 Score=84.93 Aligned_cols=108 Identities=12% Similarity=0.089 Sum_probs=89.8
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcC----------
Q 023491 6 APANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDY---------- 75 (281)
Q Consensus 6 ~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p---------- 75 (281)
+...+...|..++..|+|.+|+.+|..+- .|..+|.||.++|+|+.|++.+.++.....
T Consensus 1194 n~ad~~~iGd~le~eg~YeeA~~~Y~kA~-----------ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve 1262 (1630)
T 1xi4_A 1194 NNAHIQQVGDRCYDEKMYDAAKLLYNNVS-----------NFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVD 1262 (1630)
T ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHhhh-----------HHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 44567789999999999999999999963 478899999999999999999999843332
Q ss_pred ---------------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 023491 76 ---------------NHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQ 124 (281)
Q Consensus 76 ---------------~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~ 124 (281)
.++..+..++..|..+|.|++|+..|+.+|.+++.+..+...++.+..+
T Consensus 1263 ~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmftELaiLyaK 1326 (1630)
T 1xi4_A 1263 GKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSK 1326 (1630)
T ss_pred hhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHHHHHHHHHHh
Confidence 2444566778889999999999999999999999888888777766554
No 212
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.10 E-value=2.9e-05 Score=71.01 Aligned_cols=116 Identities=7% Similarity=-0.075 Sum_probs=92.9
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCc------ccHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhcCC
Q 023491 5 AAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQ------QKIALHSNRAACYLKLH--DFKKAAEECTSVLELDYN 76 (281)
Q Consensus 5 ~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p------~~~~a~~nra~~~~klg--~y~~Ai~~~~~al~i~p~ 76 (281)
.+.+.....+.+++++|+.+.|.+.+.+.... +| ....+.+.-|.+.+..| ++..|...|..+....|+
T Consensus 134 ~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~---~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~ 210 (310)
T 3mv2_B 134 GTTELLLLAIEVALLNNNVSTASTIFDNYTNA---IEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPT 210 (310)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCS
T ss_pred CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc---CccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCC
Confidence 67888889999999999999999999999887 76 23333333355566667 999999999999887776
Q ss_pred C--HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------CCCCHHHHHHHHHHHHHhh
Q 023491 77 H--TGALMLRAQTLVTLKEYNSALFDVNRLIEL----------NPSSEVYQNLQARLKTQLS 126 (281)
Q Consensus 77 ~--~~a~~~lg~a~~~~g~~~eAl~~~ekAL~l----------dP~~~~a~~~l~~l~~~l~ 126 (281)
+ ...+++ ++.++|+|.+|...++.++++ +|+++.+..++..+-..++
T Consensus 211 ~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lg 269 (310)
T 3mv2_B 211 WKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITLALMQG 269 (310)
T ss_dssp HHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTT
T ss_pred cccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHhC
Confidence 3 334444 999999999999999988877 5889999888877766665
No 213
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.09 E-value=7.4e-06 Score=78.45 Aligned_cols=102 Identities=13% Similarity=0.126 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH-----
Q 023491 8 ANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM----- 82 (281)
Q Consensus 8 ~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~----- 82 (281)
..+...|..++..|.|++|+.+|..+ ..|.++|.|+.++|+|++|+..|.++ .++.+|.
T Consensus 123 ~a~~~IGd~~~~~g~yeeA~~~Y~~a-----------~n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~a 186 (449)
T 1b89_A 123 AHIQQVGDRCYDEKMYDAAKLLYNNV-----------SNFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFA 186 (449)
T ss_dssp --------------CTTTHHHHHHHT-----------TCHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh-----------hhHHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHH
Confidence 48889999999999999999999976 24788999999999999999999998 3443333
Q ss_pred -------------------------HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 023491 83 -------------------------LRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQL 125 (281)
Q Consensus 83 -------------------------~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l 125 (281)
.+..+|.+.|++.+|+..|+++|.+++.+..+...++.+..+.
T Consensus 187 Cv~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky 254 (449)
T 1b89_A 187 CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKF 254 (449)
T ss_dssp HHHTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTT
T ss_pred HHHcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhc
Confidence 3446788889999999999999999999988888877665543
No 214
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.07 E-value=6.6e-06 Score=78.29 Aligned_cols=89 Identities=12% Similarity=0.016 Sum_probs=74.5
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh-----cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAK-----IKQQKIALHSNRAACYLKLHDFKKAAEECTSVLEL---- 73 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~-----~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i---- 73 (281)
+|..+..+.+.|..|..+|+|++|+.+|.++|.+.. .+|..+..++|+|.+|..+|+|++|+..|.+|+.+
T Consensus 325 h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~ 404 (429)
T 3qwp_A 325 NIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVT 404 (429)
T ss_dssp SHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 455677888999999999999999999999998763 77888999999999999999999999999999877
Q ss_pred -cCCCHH---HHHHHHHHHHHc
Q 023491 74 -DYNHTG---ALMLRAQTLVTL 91 (281)
Q Consensus 74 -~p~~~~---a~~~lg~a~~~~ 91 (281)
.|+++. .+.+|+.++..+
T Consensus 405 lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 405 HGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp TCTTSHHHHHHHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHHH
Confidence 466664 455566665443
No 215
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.03 E-value=2e-05 Score=75.13 Aligned_cols=78 Identities=8% Similarity=0.024 Sum_probs=69.0
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh-----cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAK-----IKQQKIALHSNRAACYLKLHDFKKAAEECTSVLEL---- 73 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~-----~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i---- 73 (281)
+|..+..+.++|..|..+|+|++|+.+|.++|.+.. .+|..+..++|+|.+|..+|+|++|+..|.+|+.+
T Consensus 336 Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~ 415 (433)
T 3qww_A 336 NVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVA 415 (433)
T ss_dssp SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 455677888999999999999999999999998864 67888999999999999999999999999999877
Q ss_pred -cCCCHHH
Q 023491 74 -DYNHTGA 80 (281)
Q Consensus 74 -~p~~~~a 80 (281)
.|+++..
T Consensus 416 lG~~Hp~~ 423 (433)
T 3qww_A 416 HGKDHPYI 423 (433)
T ss_dssp TCTTCHHH
T ss_pred cCCCChHH
Confidence 4667654
No 216
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.92 E-value=0.00019 Score=59.65 Aligned_cols=113 Identities=15% Similarity=0.143 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcc------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcC---CC-
Q 023491 8 ANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQ------KIALHSNRAACYLKLHDFKKAAEECTSVLELDY---NH- 77 (281)
Q Consensus 8 ~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~------~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p---~~- 77 (281)
..+++....++..|.|+.|+-+...++.+...++. ...+++.+|.++|..++|..|...|.++|.+.. .+
T Consensus 21 ~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~ 100 (167)
T 3ffl_A 21 MNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTS 100 (167)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCC
Confidence 35788899999999999999999998888653333 366889999999999999999999999876532 11
Q ss_pred ---------------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 023491 78 ---------------------TGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARL 121 (281)
Q Consensus 78 ---------------------~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l 121 (281)
.++-|.+|.||..+|++.+|+..++..-. .-..+.+-..++++
T Consensus 101 s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip~-k~Rt~kvnm~LakL 164 (167)
T 3ffl_A 101 KVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGIPS-RQRTPKINMLLANL 164 (167)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTSCG-GGCCHHHHHHHHHH
T ss_pred CccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcCCc-hhcCHHHHHHHHHH
Confidence 16789999999999999999998764211 11345565666555
No 217
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.90 E-value=8.4e-05 Score=79.67 Aligned_cols=93 Identities=14% Similarity=0.073 Sum_probs=78.9
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhhh-------------------cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 13 RAHQLYRDGRYEEALGFYTEALSVAK-------------------IKQQKIALHSNRAACYLKLHDFKKAAEECTSVLEL 73 (281)
Q Consensus 13 ~G~~~~~~gdy~eAl~~y~~aL~~~~-------------------~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i 73 (281)
.|..+...|.|++|..+|.++-.... .......+|+++|.++...|++.+|+..|.++
T Consensus 1055 IA~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn~p~vWsqLAKAql~~G~~kEAIdsYiKA--- 1131 (1630)
T 1xi4_A 1055 IANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA--- 1131 (1630)
T ss_pred HHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc---
Confidence 47888888888888888777532110 23466889999999999999999999999887
Q ss_pred cCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 023491 74 DYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPS 110 (281)
Q Consensus 74 ~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~ 110 (281)
+++.+|+.+|.++.++|+|++|+++|..|++..+.
T Consensus 1132 --dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1132 --DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred --CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc
Confidence 89999999999999999999999999999998854
No 218
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.90 E-value=9.1e-05 Score=58.95 Aligned_cols=83 Identities=16% Similarity=0.148 Sum_probs=71.9
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHH---HHHHHHHHHHhhhcC-c-ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCC
Q 023491 3 SPAAPANKIERAHQLYRDGRYEE---ALGFYTEALSVAKIK-Q-QKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNH 77 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~e---Al~~y~~aL~~~~~~-p-~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~ 77 (281)
++.+.+..++.|.++.+...... +|.++...+.. + | ..-.++|.+|..++++|+|.+|+.+|..+|++.|.+
T Consensus 31 ~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~---~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n 107 (126)
T 1nzn_A 31 GSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPK---GSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQN 107 (126)
T ss_dssp SCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTT---SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred CCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc---CCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCC
Confidence 35678899999999999887766 99999998886 5 4 567889999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 023491 78 TGALMLRAQTL 88 (281)
Q Consensus 78 ~~a~~~lg~a~ 88 (281)
..+.-+...+-
T Consensus 108 ~QA~~Lk~~i~ 118 (126)
T 1nzn_A 108 NQAKELERLID 118 (126)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99877766554
No 219
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.67 E-value=0.0012 Score=54.17 Aligned_cols=113 Identities=9% Similarity=0.004 Sum_probs=94.5
Q ss_pred CCCCCHHHHHHHHHHHHHcCCH------HHHHHHHHHHHHhhhcC-----cccHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 023491 2 ASPAAPANKIERAHQLYRDGRY------EEALGFYTEALSVAKIK-----QQKIALHSNRAACYLKLHDFKKAAEECTSV 70 (281)
Q Consensus 2 a~P~~a~~l~~~G~~~~~~gdy------~eAl~~y~~aL~~~~~~-----p~~~~a~~nra~~~~klg~y~~Ai~~~~~a 70 (281)
=+|.+.+.|.......-+.|+. ..-+..|++|+...|.. ...+.+|.+.|.. ..+++.+.|...|..+
T Consensus 8 ~~p~~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a 86 (161)
T 4h7y_A 8 MMANNPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMA 86 (161)
T ss_dssp --CCSHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHH
T ss_pred eCCCCHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHH
Confidence 3688999999999888888999 88999999999986522 2335556655533 6779999999999999
Q ss_pred HHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 023491 71 LELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQ 115 (281)
Q Consensus 71 l~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~ 115 (281)
+.++..++..|...|..-.+.|++..|.+.+.+|+-+.|...++.
T Consensus 87 ~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~l 131 (161)
T 4h7y_A 87 RANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEML 131 (161)
T ss_dssp HHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHHH
Confidence 999888999999999999999999999999999999999866543
No 220
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.59 E-value=0.00068 Score=54.32 Aligned_cols=81 Identities=11% Similarity=0.085 Sum_probs=69.6
Q ss_pred CHHHHHHHHHHHHHcCCH---HHHHHHHHHHHHhhhcCc-ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHH
Q 023491 6 APANKIERAHQLYRDGRY---EEALGFYTEALSVAKIKQ-QKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGAL 81 (281)
Q Consensus 6 ~a~~l~~~G~~~~~~gdy---~eAl~~y~~aL~~~~~~p-~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~ 81 (281)
+++..++.|.++.+...- ..+|.+++..+.. +| ..-.++|.+|..++++|+|..|..++..+|++.|.+..+.
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~---~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~ 115 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKE---AESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVG 115 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHH---CGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc---CcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHH
Confidence 678889999999988654 5799999998886 66 4678889999999999999999999999999999999987
Q ss_pred HHHHHHHH
Q 023491 82 MLRAQTLV 89 (281)
Q Consensus 82 ~~lg~a~~ 89 (281)
-+...+--
T Consensus 116 ~Lk~~Ie~ 123 (134)
T 3o48_A 116 ALKSMVED 123 (134)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77665543
No 221
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.47 E-value=0.0015 Score=52.87 Aligned_cols=82 Identities=12% Similarity=0.106 Sum_probs=70.0
Q ss_pred CCCHHHHHHHHHHHHHcCCH---HHHHHHHHHHHHhhhcCc-ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHH
Q 023491 4 PAAPANKIERAHQLYRDGRY---EEALGFYTEALSVAKIKQ-QKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTG 79 (281)
Q Consensus 4 P~~a~~l~~~G~~~~~~gdy---~eAl~~y~~aL~~~~~~p-~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~ 79 (281)
..+++..|+.|.++.+...- ..++.+++..+.. .| ..-.++|.+|..++++|+|.+|..++..+|++.|++..
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~---~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~Q 112 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKE---AESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQ 112 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHH---CCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHH
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc---CccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHH
Confidence 35788899999999998755 5789999998886 65 46778899999999999999999999999999999998
Q ss_pred HHHHHHHHH
Q 023491 80 ALMLRAQTL 88 (281)
Q Consensus 80 a~~~lg~a~ 88 (281)
+.-+...+-
T Consensus 113 A~~Lk~~Ie 121 (144)
T 1y8m_A 113 VGALKSMVE 121 (144)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 877665544
No 222
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.46 E-value=0.0014 Score=59.25 Aligned_cols=82 Identities=9% Similarity=-0.048 Sum_probs=65.8
Q ss_pred cCcccHHHHHHHHHHHHH---c--C------CHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHc-----CCHHHHHHH
Q 023491 39 IKQQKIALHSNRAACYLK---L--H------DFKKAAEECTSVLELDYN--HTGALMLRAQTLVTL-----KEYNSALFD 100 (281)
Q Consensus 39 ~~p~~~~a~~nra~~~~k---l--g------~y~~Ai~~~~~al~i~p~--~~~a~~~lg~a~~~~-----g~~~eAl~~ 100 (281)
.++.+..+++-.|.++.. . | ....|...++++|+++|+ +..+|..+|.+|... |+.+.|.++
T Consensus 147 ~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ 226 (301)
T 3u64_A 147 CTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTA 226 (301)
T ss_dssp CCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHH
T ss_pred cCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHH
Confidence 456677888877777654 2 2 267899999999999999 567999999999996 999999999
Q ss_pred HHHHHHhCCCC-HHHHHHHHH
Q 023491 101 VNRLIELNPSS-EVYQNLQAR 120 (281)
Q Consensus 101 ~ekAL~ldP~~-~~a~~~l~~ 120 (281)
|++||+++|+. ......++.
T Consensus 227 ferAL~LnP~~~id~~v~YA~ 247 (301)
T 3u64_A 227 FEHLTRYCSAHDPDHHITYAD 247 (301)
T ss_dssp HHHHHHHCCTTCSHHHHHHHH
T ss_pred HHHHHHhCCCCCchHHHHHHH
Confidence 99999999974 555544443
No 223
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.44 E-value=0.00012 Score=70.15 Aligned_cols=90 Identities=20% Similarity=0.182 Sum_probs=35.7
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh-------------------------cCcccHHHHHHHHHHHHHcCCH
Q 023491 6 APANKIERAHQLYRDGRYEEALGFYTEALSVAK-------------------------IKQQKIALHSNRAACYLKLHDF 60 (281)
Q Consensus 6 ~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~-------------------------~~p~~~~a~~nra~~~~klg~y 60 (281)
+...+...+..+...|+|++|+.+|..+++..+ ..| +..++.++|.+++..|.|
T Consensus 60 D~~~y~~V~~~ae~~g~~EeAi~yl~~ark~~~~~~i~~~Li~~Y~Klg~l~e~e~f~~~p-n~~a~~~IGd~~~~~g~y 138 (449)
T 1b89_A 60 DPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGP-NNAHIQQVGDRCYDEKMY 138 (449)
T ss_dssp -------------------------------------------------CHHHHTTTTTCC-----------------CT
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCccchhHHHHHHHHHHhCCHHHHHHHHcCC-cHHHHHHHHHHHHHcCCH
Confidence 334555666666666777777776666653310 122 234888899999999999
Q ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 023491 61 KKAAEECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRL 104 (281)
Q Consensus 61 ~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekA 104 (281)
++|+..|.++ ..|..+|.+++++|+|++|+.+|+++
T Consensus 139 eeA~~~Y~~a--------~n~~~LA~~L~~Lg~yq~AVea~~KA 174 (449)
T 1b89_A 139 DAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKA 174 (449)
T ss_dssp TTHHHHHHHT--------TCHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHh--------hhHHHHHHHHHHhccHHHHHHHHHHc
Confidence 9999999877 47889999999999999999999999
No 224
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.34 E-value=0.00062 Score=63.60 Aligned_cols=79 Identities=10% Similarity=0.002 Sum_probs=68.5
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALM 82 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~ 82 (281)
.|.++..+...|..++..|++++|+..+.+|+.+ ++ +..+|..+|.++.-.|++++|+..|.+|++++|... .|+
T Consensus 273 ~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~L---n~-s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~-t~~ 347 (372)
T 3ly7_A 273 LNNLSIIYQIKAVSALVKGKTDESYQAINTGIDL---EM-SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN-TLY 347 (372)
T ss_dssp GTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH---CC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH-HHH
T ss_pred CCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhc---CC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC-hHH
Confidence 4778888888898899999999999999999999 75 477888999999999999999999999999999664 555
Q ss_pred HHHH
Q 023491 83 LRAQ 86 (281)
Q Consensus 83 ~lg~ 86 (281)
...+
T Consensus 348 ~~~~ 351 (372)
T 3ly7_A 348 WIEN 351 (372)
T ss_dssp HHHH
T ss_pred HHhC
Confidence 4443
No 225
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.33 E-value=0.001 Score=55.31 Aligned_cols=81 Identities=25% Similarity=0.242 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc----------------------CcccHHHHHHHHHHHHHcCCHHHHH
Q 023491 7 PANKIERAHQLYRDGRYEEALGFYTEALSVAKI----------------------KQQKIALHSNRAACYLKLHDFKKAA 64 (281)
Q Consensus 7 a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~----------------------~p~~~~a~~nra~~~~klg~y~~Ai 64 (281)
++.+...|+.+|..|+|..|...|.++|..... .+.+..+.|.+|.||.+++++.+|+
T Consensus 63 ~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai 142 (167)
T 3ffl_A 63 YQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAI 142 (167)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHH
Confidence 457788999999999999999999999887541 1122478899999999999999999
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHH
Q 023491 65 EECTSVLELDYNHTGALMLRAQTL 88 (281)
Q Consensus 65 ~~~~~al~i~p~~~~a~~~lg~a~ 88 (281)
..++.+- ..-..++.-+.||..|
T Consensus 143 ~~Le~Ip-~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 143 AILDGIP-SRQRTPKINMLLANLY 165 (167)
T ss_dssp HHHHTSC-GGGCCHHHHHHHHHHC
T ss_pred HHHhcCC-chhcCHHHHHHHHHHh
Confidence 9987642 2336888888888776
No 226
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.32 E-value=0.0018 Score=65.04 Aligned_cols=75 Identities=7% Similarity=-0.028 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 023491 46 LHSNRAACYLKLHDFKKAAEECTSVLEL-DYNHTGALMLRAQTLVTLKE-YNSALFDVNRLIELNPSSEVYQNLQAR 120 (281)
Q Consensus 46 a~~nra~~~~klg~y~~Ai~~~~~al~i-~p~~~~a~~~lg~a~~~~g~-~~eAl~~~ekAL~ldP~~~~a~~~l~~ 120 (281)
+|...+.+..+.|..+.|...|.+|+.. .+.....|...|.+....++ ++.|...|+++|+..|++..++.....
T Consensus 436 vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~ 512 (679)
T 4e6h_A 436 VYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLD 512 (679)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHH
Confidence 3444444444455555555555555544 22334444444444444433 566666666666666665555433333
No 227
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.14 E-value=0.0056 Score=61.43 Aligned_cols=99 Identities=10% Similarity=-0.053 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 023491 9 NKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLH-DFKKAAEECTSVLELDYNHTGALMLRAQT 87 (281)
Q Consensus 9 ~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg-~y~~Ai~~~~~al~i~p~~~~a~~~lg~a 87 (281)
.|+..+....+.|....|..+|.+|+... .+....+|...|...++.+ +++.|...|+.+++..|+.+..+...+..
T Consensus 436 vWi~y~~~erR~~~l~~AR~vf~~A~~~~--~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~f 513 (679)
T 4e6h_A 436 VYCVYMNTMKRIQGLAASRKIFGKCRRLK--KLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDF 513 (679)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHTG--GGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhc--CCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHH
Confidence 34444444444555555555555555430 1122344444444444443 36666666666666666666655555665
Q ss_pred HHHcCCHHHHHHHHHHHHHhCC
Q 023491 88 LVTLKEYNSALFDVNRLIELNP 109 (281)
Q Consensus 88 ~~~~g~~~eAl~~~ekAL~ldP 109 (281)
....|+...|...|++|+...|
T Consensus 514 e~~~~~~~~AR~lferal~~~~ 535 (679)
T 4e6h_A 514 LIYVNEESQVKSLFESSIDKIS 535 (679)
T ss_dssp HHHHTCHHHHHHHHHHHTTTSS
T ss_pred HHhCCCHHHHHHHHHHHHHhcC
Confidence 6666666666666666666655
No 228
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=97.13 E-value=0.0059 Score=56.96 Aligned_cols=112 Identities=14% Similarity=0.104 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcC-------------------cccHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 023491 9 NKIERAHQLYRDGRYEEALGFYTEALSVAKIK-------------------QQKIALHSNRAACYLKLHDFKKAAEECTS 69 (281)
Q Consensus 9 ~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~-------------------p~~~~a~~nra~~~~klg~y~~Ai~~~~~ 69 (281)
.+...|......|+...|+..|.+|+.+.... .....+...++.+++.+|++..|+..+..
T Consensus 117 ~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~ 196 (388)
T 2ff4_A 117 AEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEA 196 (388)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 34456666777899999999999999875311 11223445677888899999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------CCCCHHHHHHHHHH
Q 023491 70 VLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIEL-------NPSSEVYQNLQARL 121 (281)
Q Consensus 70 al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~l-------dP~~~~a~~~l~~l 121 (281)
++..+|-+-.+|..+-.+|+..|+..+|+..|+++... .| .+..+.+...|
T Consensus 197 ~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P-~~~l~~l~~~i 254 (388)
T 2ff4_A 197 LTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDP-GPTLRALNERI 254 (388)
T ss_dssp HHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCC-CHHHHHHHHHH
T ss_pred HHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCC-CHHHHHHHHHH
Confidence 99999999999999999999999999999999988663 34 34455554444
No 229
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=96.89 E-value=0.03 Score=46.98 Aligned_cols=100 Identities=20% Similarity=0.191 Sum_probs=78.5
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHH--Hhc-------------
Q 023491 10 KIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVL--ELD------------- 74 (281)
Q Consensus 10 l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al--~i~------------- 74 (281)
..-.+..+|-.|.|..|+-++. .-+.+...+.-+.||.++++|..|+..++.+| .++
T Consensus 36 ~lL~~I~LyyngEY~R~Lf~L~--------~lNT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ff 107 (242)
T 3kae_A 36 RMLMSIVLYLNGEYTRALFHLH--------KLNTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMF 107 (242)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHH--------TCCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTS
T ss_pred HhhhhhhhhhcchHhHHHHHHH--------hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceee
Confidence 3456788888888888876542 33566777778999999999999999999999 333
Q ss_pred --CCCHHHHH-HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 023491 75 --YNHTGALM-LRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNL 117 (281)
Q Consensus 75 --p~~~~a~~-~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~ 117 (281)
|.+-+.++ .+|.++.+.|..++|+..|.+.....|=...+.++
T Consensus 108 vd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf~~vEnl 153 (242)
T 3kae_A 108 VDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLFSPVENL 153 (242)
T ss_dssp CCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred eccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccccchHHHH
Confidence 33445444 45999999999999999999999999877766543
No 230
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=96.38 E-value=0.013 Score=59.37 Aligned_cols=60 Identities=22% Similarity=0.276 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 023491 45 ALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRL 104 (281)
Q Consensus 45 ~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekA 104 (281)
.++...+..++..|+|+-|+....+|+...|....+|+.|+.||..+|+|+.|+-.+.-+
T Consensus 338 ~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 338 DLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 355556777778999999999999999999999999999999999999999999776544
No 231
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=96.26 E-value=0.11 Score=49.66 Aligned_cols=113 Identities=11% Similarity=-0.074 Sum_probs=83.5
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcc-------------------------------------cHH
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQ-------------------------------------KIA 45 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~-------------------------------------~~~ 45 (281)
.|..+..|+..+..+...|+.+.|...|.+|+.. |.... ...
T Consensus 209 ~p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 287 (493)
T 2uy1_A 209 FYYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDL 287 (493)
T ss_dssp TTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHH
Confidence 4778889999999999999999999999999987 52211 012
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHH
Q 023491 46 LHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLK-EYNSALFDVNRLIELNPSSEVYQNL 117 (281)
Q Consensus 46 a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g-~~~eAl~~~ekAL~ldP~~~~a~~~ 117 (281)
+|...+..+.+.+..+.|...|.+| ...+.....|...|.+-+..+ +.+.|...|+.+++..|+.+..+..
T Consensus 288 lw~~y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~ 359 (493)
T 2uy1_A 288 LRINHLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEE 359 (493)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHH
Confidence 2333344444567788999999999 433345667777777777666 5999999999999999988765433
No 232
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=96.00 E-value=0.17 Score=48.62 Aligned_cols=109 Identities=15% Similarity=0.072 Sum_probs=87.8
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcC-CCHHHHHHH
Q 023491 6 APANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDY-NHTGALMLR 84 (281)
Q Consensus 6 ~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p-~~~~a~~~l 84 (281)
+...+...-..+.+.|++++|+.+|.+.... .-..+...|..+-.+|.+.|++++|...|....+..- .+...|-.+
T Consensus 104 d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~--g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~L 181 (501)
T 4g26_A 104 NEATFTNGARLAVAKDDPEMAFDMVKQMKAF--GIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAAL 181 (501)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHc--CCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 4456666778889999999999999998764 1234677888888999999999999999999877643 477888889
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHh--CCCCHHHHH
Q 023491 85 AQTLVTLKEYNSALFDVNRLIEL--NPSSEVYQN 116 (281)
Q Consensus 85 g~a~~~~g~~~eAl~~~ekAL~l--dP~~~~a~~ 116 (281)
-.++.+.|++++|...|++..+. .|+...+..
T Consensus 182 i~~~~~~g~~d~A~~ll~~Mr~~g~~ps~~T~~~ 215 (501)
T 4g26_A 182 LKVSMDTKNADKVYKTLQRLRDLVRQVSKSTFDM 215 (501)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHTSSBCHHHHHH
T ss_pred HHHHhhCCCHHHHHHHHHHHHHhCCCcCHHHHHH
Confidence 99999999999999999988775 455444433
No 233
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=95.83 E-value=0.13 Score=48.20 Aligned_cols=96 Identities=17% Similarity=0.141 Sum_probs=78.7
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhhhc---CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc---CCCH----HHH
Q 023491 12 ERAHQLYRDGRYEEALGFYTEALSVAKI---KQQKIALHSNRAACYLKLHDFKKAAEECTSVLELD---YNHT----GAL 81 (281)
Q Consensus 12 ~~G~~~~~~gdy~eAl~~y~~aL~~~~~---~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~---p~~~----~a~ 81 (281)
.+|..++..|+|.+|+.++.+.+..+.. ......++.....+|+.++++.++...|.++..+. +.++ ...
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~ 183 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALD 183 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHH
Confidence 6899999999999999999999987653 33557778888899999999999999999987654 1333 345
Q ss_pred HHHHHHHH-HcCCHHHHHHHHHHHHHh
Q 023491 82 MLRAQTLV-TLKEYNSALFDVNRLIEL 107 (281)
Q Consensus 82 ~~lg~a~~-~~g~~~eAl~~~ekAL~l 107 (281)
..-|.++. ..++|..|...|-.++.-
T Consensus 184 ~~~Gi~~l~~~rdyk~A~~~F~eaf~~ 210 (394)
T 3txn_A 184 LQSGILHAADERDFKTAFSYFYEAFEG 210 (394)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHhccCHHHHHHHHHHHHhc
Confidence 55588888 899999999999988753
No 234
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.75 E-value=0.068 Score=50.35 Aligned_cols=102 Identities=14% Similarity=-0.026 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcC--CCH----HHHH
Q 023491 9 NKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDY--NHT----GALM 82 (281)
Q Consensus 9 ~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p--~~~----~a~~ 82 (281)
.+..+|..++..|++..|+.+|.++...+........+++....+++..+++..+...+.++-.+-. .++ ....
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~ 212 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKT 212 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHH
Confidence 4568999999999999999999999988776677788999999999999999999999999865421 222 3445
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 023491 83 LRAQTLVTLKEYNSALFDVNRLIELNPS 110 (281)
Q Consensus 83 ~lg~a~~~~g~~~eAl~~~ekAL~ldP~ 110 (281)
..|.++...++|..|...|..++.....
T Consensus 213 ~~gl~~l~~r~f~~Aa~~f~e~~~t~~~ 240 (429)
T 4b4t_R 213 YYGIHCLAVRNFKEAAKLLVDSLATFTS 240 (429)
T ss_dssp HHHHGGGGTSCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHhChHHHHHHHHHHHhccCCc
Confidence 5688888899999999999888776443
No 235
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=95.55 E-value=0.074 Score=51.39 Aligned_cols=80 Identities=8% Similarity=-0.102 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 023491 46 LHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQL 125 (281)
Q Consensus 46 a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l 125 (281)
++..+|.+......+..|..+|.+|+.+.|.+...|..||.+....|+.-.|+-+|.++|......+.++.++..+-...
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~~ 233 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKA 233 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Confidence 55677888877888999999999999999999999999999999999999999999999998877888888888877654
No 236
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=95.25 E-value=0.27 Score=46.90 Aligned_cols=109 Identities=10% Similarity=-0.094 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhcCCCHHHHHHHHH
Q 023491 8 ANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLH-DFKKAAEECTSVLELDYNHTGALMLRAQ 86 (281)
Q Consensus 8 ~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg-~y~~Ai~~~~~al~i~p~~~~a~~~lg~ 86 (281)
..++..+....+.+..+.|...|.+| .. .+....+|...|...+..+ +++.|...|+.+++..|+.+..+...+.
T Consensus 287 ~lw~~y~~~~~r~~~~~~AR~i~~~A-~~---~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid 362 (493)
T 2uy1_A 287 LLRINHLNYVLKKRGLELFRKLFIEL-GN---EGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFL 362 (493)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHH-TT---SCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh-hC---CCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHH
Confidence 44566666666788899999999999 43 3345667777777777666 6999999999999999999888888888
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 023491 87 TLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQ 124 (281)
Q Consensus 87 a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~ 124 (281)
.....|+...|...|+++ +....++.........
T Consensus 363 ~e~~~~~~~~aR~l~er~----~k~~~lw~~~~~fE~~ 396 (493)
T 2uy1_A 363 FLLRIGDEENARALFKRL----EKTSRMWDSMIEYEFM 396 (493)
T ss_dssp HHHHHTCHHHHHHHHHHS----CCBHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHH----HHHHHHHHHHHHHHHH
Confidence 889999999999999887 2344444444444433
No 237
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=94.86 E-value=0.12 Score=45.96 Aligned_cols=63 Identities=13% Similarity=-0.006 Sum_probs=49.4
Q ss_pred HHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 023491 53 CYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQ 115 (281)
Q Consensus 53 ~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~ 115 (281)
.+++.|.++.|+..+...|+.+|.++..-..+.+.|+-.|+|+.|++.++.+.+++|.....-
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a 68 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGA 68 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHH
Confidence 456677888888888888888888888888888888888888888888888888888765443
No 238
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=94.68 E-value=0.058 Score=54.72 Aligned_cols=60 Identities=23% Similarity=0.263 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 023491 8 ANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSV 70 (281)
Q Consensus 8 ~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~a 70 (281)
..+..++..+...|+|+-|+.+-.+|+.. .|..+..|+.|+.||.++|+|+.|+-.+..+
T Consensus 338 ~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~---aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 338 DLLNIQTNFLLNRGDYELALGVSNTSTEL---ALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHhc---CchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 45667788888999999999999999999 9999999999999999999999998665444
No 239
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=94.63 E-value=0.42 Score=42.53 Aligned_cols=64 Identities=19% Similarity=0.203 Sum_probs=58.8
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHH
Q 023491 14 AHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGA 80 (281)
Q Consensus 14 G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a 80 (281)
...+++.|.+.+|+......|+. .|.++.++..+...+.-.|+++.|...+..+.+++|.....
T Consensus 4 ~~~ll~~g~L~~al~~~~~~VR~---~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~ 67 (273)
T 1zbp_A 4 WKNALSEGQLQQALELLIEAIKA---SPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPG 67 (273)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHT---CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHh---CCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHH
Confidence 35678899999999999999998 99999999999999999999999999999999999987654
No 240
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=94.39 E-value=0.26 Score=52.00 Aligned_cols=100 Identities=8% Similarity=-0.035 Sum_probs=77.5
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh--------------------cCcccHHHHHHHHHHHHHcCCHHHH
Q 023491 4 PAAPANKIERAHQLYRDGRYEEALGFYTEALSVAK--------------------IKQQKIALHSNRAACYLKLHDFKKA 63 (281)
Q Consensus 4 P~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~--------------------~~p~~~~a~~nra~~~~klg~y~~A 63 (281)
|.++...+.+|.+++..|++++|..+|.++..... .....+.+|+.....+.+.+.++.+
T Consensus 839 ~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~v 918 (1139)
T 4fhn_B 839 NSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDA 918 (1139)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHH
T ss_pred cCCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHH
Confidence 34566678999999999999999999988743210 1222346677777888899999999
Q ss_pred HHHHHHHHHhcCC-CH----HHHHHHHHHHHHcCCHHHHHHHHHH
Q 023491 64 AEECTSVLELDYN-HT----GALMLRAQTLVTLKEYNSALFDVNR 103 (281)
Q Consensus 64 i~~~~~al~i~p~-~~----~a~~~lg~a~~~~g~~~eAl~~~ek 103 (281)
++....||..... .. ..|.++-..+..+|+|++|...+..
T Consensus 919 i~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~ 963 (1139)
T 4fhn_B 919 LEFSLLADASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMV 963 (1139)
T ss_dssp HHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHH
T ss_pred HHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHh
Confidence 9999999988653 32 2577888899999999999877743
No 241
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=93.88 E-value=0.4 Score=46.26 Aligned_cols=79 Identities=9% Similarity=-0.022 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 023491 9 NKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTL 88 (281)
Q Consensus 9 ~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~ 88 (281)
.+...|..+.....+..|..+|.+|+.+ .|.....|+.+|.++...|+.-.|+-+|.+++.....++.+.-++...+
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~---~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f 230 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQL---VPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKAL 230 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHh---CCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHH
Confidence 5667898888889999999999999999 9999999999999999999999999999999988877888888887776
Q ss_pred HH
Q 023491 89 VT 90 (281)
Q Consensus 89 ~~ 90 (281)
..
T Consensus 231 ~~ 232 (497)
T 1ya0_A 231 SK 232 (497)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 242
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=93.80 E-value=0.93 Score=42.78 Aligned_cols=100 Identities=12% Similarity=0.079 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh---cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---hcCCCH---
Q 023491 8 ANKIERAHQLYRDGRYEEALGFYTEALSVAK---IKQQKIALHSNRAACYLKLHDFKKAAEECTSVLE---LDYNHT--- 78 (281)
Q Consensus 8 ~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~---~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~---i~p~~~--- 78 (281)
.....++..++..|+|.+|+..+.....-+- .......+++.....|+..++|..|...+.++.. -.+.++
T Consensus 138 rl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk 217 (445)
T 4b4t_P 138 RVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLK 217 (445)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHH
Confidence 3456789999999999999999988764321 1223467788888999999999999999988732 233333
Q ss_pred -HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 79 -GALMLRAQTLVTLKEYNSALFDVNRLIEL 107 (281)
Q Consensus 79 -~a~~~lg~a~~~~g~~~eAl~~~ekAL~l 107 (281)
..+...|.++...++|.+|..+|..++..
T Consensus 218 ~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 218 LEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 35677799999999999999999998875
No 243
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=93.72 E-value=0.88 Score=43.51 Aligned_cols=91 Identities=9% Similarity=-0.004 Sum_probs=73.2
Q ss_pred CHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHcCCHHHHHHH
Q 023491 22 RYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELD-YNHTGALMLRAQTLVTLKEYNSALFD 100 (281)
Q Consensus 22 dy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~-p~~~~a~~~lg~a~~~~g~~~eAl~~ 100 (281)
.+..|..+|.+.... .-..+...|..+-.+|.+.|++++|+..|....... ..+...|-.+-.+|++.|++++|+..
T Consensus 85 ~l~~A~~lf~~M~~~--G~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l 162 (501)
T 4g26_A 85 GLSRGFDIFKQMIVD--KVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEV 162 (501)
T ss_dssp HHHHHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHh--CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHH
Confidence 468888888887664 123467889999999999999999999999987754 34778888888999999999999999
Q ss_pred HHHHHHh--CCCCHHH
Q 023491 101 VNRLIEL--NPSSEVY 114 (281)
Q Consensus 101 ~ekAL~l--dP~~~~a 114 (281)
|...++. .|+...+
T Consensus 163 ~~~M~~~G~~Pd~~ty 178 (501)
T 4g26_A 163 DAHMVESEVVPEEPEL 178 (501)
T ss_dssp HHHHHHTTCCCCHHHH
T ss_pred HHHHHhcCCCCCHHHH
Confidence 9988874 4554433
No 244
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=92.82 E-value=3.2 Score=40.50 Aligned_cols=26 Identities=8% Similarity=0.009 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHH
Q 023491 7 PANKIERAHQLYRDGRYEEALGFYTE 32 (281)
Q Consensus 7 a~~l~~~G~~~~~~gdy~eAl~~y~~ 32 (281)
...|...|..+.+.++++.|..+|.+
T Consensus 681 ~~~W~~la~~al~~~~~~~A~~~y~~ 706 (814)
T 3mkq_A 681 EMKWRALGDASLQRFNFKLAIEAFTN 706 (814)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 34444555555555555555555544
No 245
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=92.39 E-value=0.59 Score=43.23 Aligned_cols=60 Identities=12% Similarity=0.026 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 023491 9 NKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVL 71 (281)
Q Consensus 9 ~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al 71 (281)
++...+..++..|++.+|+..+..++.. +|.+-.++..+-.+|++.|+..+|+..|..+-
T Consensus 173 a~~~~~~~~l~~g~~~~a~~~l~~~~~~---~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r 232 (388)
T 2ff4_A 173 AHTAKAEAEIACGRASAVIAELEALTFE---HPYREPLWTQLITAYYLSDRQSDALGAYRRVK 232 (388)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH---STTCHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4456677888999999999999999998 99999999999999999999999999998874
No 246
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=92.29 E-value=1.9 Score=35.73 Aligned_cols=50 Identities=12% Similarity=-0.051 Sum_probs=37.6
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 023491 13 RAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSV 70 (281)
Q Consensus 13 ~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~a 70 (281)
+-..++..|+++.|.+.-... .+...|..+|...+..|++.-|..+|.++
T Consensus 11 rF~LAL~lg~l~~A~e~a~~l--------~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 11 RFDLALEYGNLDAALDEAKKL--------NDSITWERLIQEALAQGNASLAEMIYQTQ 60 (177)
T ss_dssp HHHHHHHTTCHHHHHHHHHHH--------CCHHHHHHHHHHHHHTTCHHHHHHHHHHT
T ss_pred HHHHHHhcCCHHHHHHHHHHh--------CCHHHHHHHHHHHHHcCChHHHHHHHHHh
Confidence 344667788888888764332 34667888888888899999888888776
No 247
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=91.66 E-value=1.2 Score=43.51 Aligned_cols=46 Identities=11% Similarity=-0.001 Sum_probs=34.8
Q ss_pred HHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 023491 54 YLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRL 104 (281)
Q Consensus 54 ~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekA 104 (281)
.+.+|+++.|.+.+... ++...|-.+|..+.+.|+++.|..+|.++
T Consensus 662 ~l~~~~~~~A~~~~~~~-----~~~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 662 ALKVGQLTLARDLLTDE-----SAEMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHTCHHHHHHHHTTC-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhhcCCHHHHHHHHHhh-----CcHhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 35577777777766544 67788888888888888888888888765
No 248
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=91.32 E-value=0.38 Score=46.66 Aligned_cols=70 Identities=11% Similarity=0.042 Sum_probs=57.4
Q ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc--CC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 023491 42 QKIALHSNRAACYLKLHDFKKAAEECTSVLELD--YN---HTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSS 111 (281)
Q Consensus 42 ~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~--p~---~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~ 111 (281)
..+.+++.+-..|+..+.|+.|.....++.-.. .. ....+|.+|.++.-.++|.+|..+|..|++..|.+
T Consensus 229 ~qa~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 229 TKAMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp HHHHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCS
T ss_pred hhHHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 346777888899999999999999999984221 11 14578899999999999999999999999988764
No 249
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=88.65 E-value=7.2 Score=41.03 Aligned_cols=99 Identities=7% Similarity=-0.090 Sum_probs=77.7
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhh-hcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc-CCCHHHHHHHHHH
Q 023491 10 KIERAHQLYRDGRYEEALGFYTEALSVA-KIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELD-YNHTGALMLRAQT 87 (281)
Q Consensus 10 l~~~G~~~~~~gdy~eAl~~y~~aL~~~-~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~-p~~~~a~~~lg~a 87 (281)
+...-+.+.+.|+.++|..+|....... ..-..+...|+.+-..|.+.|++++|+..|....... ..+...|-.+-.+
T Consensus 130 ynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntLI~g 209 (1134)
T 3spa_A 130 LLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAALQC 209 (1134)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 4455568899999999999997754321 1134577889999999999999999999999987654 3477778888888
Q ss_pred HHHcCCH-HHHHHHHHHHHHhC
Q 023491 88 LVTLKEY-NSALFDVNRLIELN 108 (281)
Q Consensus 88 ~~~~g~~-~eAl~~~ekAL~ld 108 (281)
+++.|+. +.|...|+......
T Consensus 210 lcK~G~~~e~A~~Ll~EM~~kG 231 (1134)
T 3spa_A 210 MGRQDQDAGTIERCLEQMSQEG 231 (1134)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHT
T ss_pred HHhCCCcHHHHHHHHHHHHHcC
Confidence 9999985 78889998888754
No 250
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=87.53 E-value=4.5 Score=32.97 Aligned_cols=81 Identities=15% Similarity=0.055 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 023491 8 ANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQT 87 (281)
Q Consensus 8 ~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a 87 (281)
..|+..| .+...++.+.|...|..++.. +...+-+|...|..-.+.|++..|...+.++|.+.|..... +..|..
T Consensus 62 ~LWIrYA-~~~ei~D~d~aR~vy~~a~~~---hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~-le~a~~ 136 (161)
T 4h7y_A 62 RIQVRFA-ELKAIQEPDDARDYFQMARAN---CKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEM-LEIALR 136 (161)
T ss_dssp HHHHHHH-HHHHHHCGGGCHHHHHHHHHH---CTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHH-HHHHHH
T ss_pred HHHHHHH-HHHHhcCHHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHH-HHHHHH
Confidence 3445545 335568999999999999997 66668889999999999999999999999999999865543 444444
Q ss_pred HHHcCC
Q 023491 88 LVTLKE 93 (281)
Q Consensus 88 ~~~~g~ 93 (281)
-.+.|.
T Consensus 137 nl~~~~ 142 (161)
T 4h7y_A 137 NLNLQK 142 (161)
T ss_dssp HHHTTC
T ss_pred hhhcCC
Confidence 444443
No 251
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=86.88 E-value=5.2 Score=33.55 Aligned_cols=80 Identities=13% Similarity=0.084 Sum_probs=61.5
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCH
Q 023491 15 HQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEY 94 (281)
Q Consensus 15 ~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~ 94 (281)
...++-.+|+.|+-+-.=. -+.......-++..++-.|+|..|+-.+... +...+.|..+.||..+++|
T Consensus 10 ~Ks~kY~dYdt~~fLsa~L------~~~~~eY~lL~~I~LyyngEY~R~Lf~L~~l-----NT~Ts~YYk~LCy~klKdY 78 (242)
T 3kae_A 10 CKSIRYRDYETAIFLAACL------LPCKPEYRMLMSIVLYLNGEYTRALFHLHKL-----NTCTSKYYESLCYKKKKDY 78 (242)
T ss_dssp HHHHHTTCHHHHHHHHHHH------C----CTHHHHHHHHHHTTCHHHHHHHHHTC-----CBHHHHHHHHHHHHHTTCH
T ss_pred HHHhhcccccHHHHHHHHH------ccCChHHHhhhhhhhhhcchHhHHHHHHHhc-----chHHHHHHHHHHHHHHHHH
Confidence 3457778888877542222 2334456667888899999999998877665 7888999999999999999
Q ss_pred HHHHHHHHHHH
Q 023491 95 NSALFDVNRLI 105 (281)
Q Consensus 95 ~eAl~~~ekAL 105 (281)
..|+.+++..|
T Consensus 79 kkA~~~le~il 89 (242)
T 3kae_A 79 KKAIKSLESIL 89 (242)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999999
No 252
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=85.65 E-value=3.5 Score=34.13 Aligned_cols=54 Identities=13% Similarity=0.039 Sum_probs=46.3
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 023491 43 KIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRL 104 (281)
Q Consensus 43 ~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekA 104 (281)
+....|.+| +.+|+++.|.+.+..+ ++...|-.+|.+....|++.-|..+|+++
T Consensus 7 D~~~rF~LA---L~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 7 DPHIRFDLA---LEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQ 60 (177)
T ss_dssp CHHHHHHHH---HHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHT
T ss_pred ChHHHHHHH---HhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHh
Confidence 445556555 5699999999999877 78999999999999999999999999875
No 253
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=84.06 E-value=2.6 Score=40.13 Aligned_cols=65 Identities=6% Similarity=0.030 Sum_probs=51.5
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcC----------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCC
Q 023491 47 HSNRAACYLKLHDFKKAAEECTSVLELDY----------NHTGALMLRAQTLVTLKEYNSALFDVNRLIEL-NPSS 111 (281)
Q Consensus 47 ~~nra~~~~klg~y~~Ai~~~~~al~i~p----------~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~l-dP~~ 111 (281)
..++..+|+++++...|...+..+-.... .....+|.+|.+++..++|.+|..++..|++. .|..
T Consensus 179 ~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 179 VNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 35667889999999999888865533221 12357999999999999999999999999998 7654
No 254
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=82.16 E-value=11 Score=36.49 Aligned_cols=66 Identities=9% Similarity=0.001 Sum_probs=45.2
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhhh--cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCC
Q 023491 11 IERAHQLYRDGRYEEALGFYTEALSVAK--IKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYN 76 (281)
Q Consensus 11 ~~~G~~~~~~gdy~eAl~~y~~aL~~~~--~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~ 76 (281)
...-..|+..+.|.+|..+..++.--.. .+...+.++|.+|.++.-.++|.+|..++..|++..|.
T Consensus 235 nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~ 302 (523)
T 4b4t_S 235 NLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPH 302 (523)
T ss_dssp HHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSC
T ss_pred HHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc
Confidence 3444566777888888888777642100 12234667778888888888888888888888876653
No 255
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=82.03 E-value=8.5 Score=31.08 Aligned_cols=53 Identities=13% Similarity=-0.018 Sum_probs=38.6
Q ss_pred HcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 023491 56 KLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELN 108 (281)
Q Consensus 56 klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ld 108 (281)
..|.-++--..+..++.-.+-++..++.+|.+|.+.|+..+|-..+.+|.+-.
T Consensus 103 ~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG 155 (172)
T 1wy6_A 103 IQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKKG 155 (172)
T ss_dssp HTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHhh
Confidence 34444444444444444456679999999999999999999999999998763
No 256
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=80.60 E-value=12 Score=34.77 Aligned_cols=99 Identities=10% Similarity=0.082 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCc--ccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhcCCC----HHH
Q 023491 8 ANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQ--QKIALHSNRAACYLK-LHDFKKAAEECTSVLELDYNH----TGA 80 (281)
Q Consensus 8 ~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p--~~~~a~~nra~~~~k-lg~y~~Ai~~~~~al~i~p~~----~~a 80 (281)
.+.+.+|..+...|++++...++.....+...-+ ..+.+..++-..+.. -+..+.-+..|..+|+..... .+.
T Consensus 20 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~r~flr~ 99 (394)
T 3txn_A 20 QGILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEKRTFLRQ 99 (394)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567889999999999999998877654432111 111212222222211 234444455555555433222 121
Q ss_pred HH--HHHHHHHHcCCHHHHHHHHHHHHH
Q 023491 81 LM--LRAQTLVTLKEYNSALFDVNRLIE 106 (281)
Q Consensus 81 ~~--~lg~a~~~~g~~~eAl~~~ekAL~ 106 (281)
-. ++|..|+..|+|.+|+..+.++++
T Consensus 100 ~l~~kL~~l~~~~~~y~~a~~~i~~l~~ 127 (394)
T 3txn_A 100 SLEARLIALYFDTALYTEALALGAQLLR 127 (394)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 12 566677777777777666666655
No 257
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=80.21 E-value=5.5 Score=39.28 Aligned_cols=57 Identities=12% Similarity=-0.041 Sum_probs=46.6
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023491 50 RAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIE 106 (281)
Q Consensus 50 ra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ 106 (281)
++...++.|++..|...|..+-.......+..|.+|.++..+|+-.+|...|+++..
T Consensus 291 ~~r~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 291 RVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 333455779999999999776544345688899999999999999999999999875
No 258
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=78.20 E-value=8.4 Score=39.80 Aligned_cols=97 Identities=15% Similarity=0.053 Sum_probs=67.6
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHH-Hh-----------------
Q 023491 12 ERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVL-EL----------------- 73 (281)
Q Consensus 12 ~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al-~i----------------- 73 (281)
.....++..|.|+-|.. .+..++.+| ...|-+|.+|+.+|++++|..+|.+|- -+
T Consensus 815 ~l~~~L~~~~~~~~a~e----L~~~~~~t~---~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll 887 (950)
T 4gq2_M 815 ELVEKLFLFKQYNACMQ----LIGWLNSDP---IAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIA 887 (950)
T ss_dssp HHHHHHHHTTCHHHHHH----HGGGCCSSH---HHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHH
T ss_pred HHHHHHHHhcHHHHHHH----HHhhcCCCh---HHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhcc
Confidence 35667788888876654 233444344 334779999999999999999998652 11
Q ss_pred ---cCC--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHH
Q 023491 74 ---DYN--HTGALMLRAQTLVTLKEYNSALFDVNRLIELN-PSSEVYQ 115 (281)
Q Consensus 74 ---~p~--~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ld-P~~~~a~ 115 (281)
... ....|+....++...+-+.-++...+.||... ++++...
T Consensus 888 ~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~~~dd~~l~ 935 (950)
T 4gq2_M 888 EKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDLS 935 (950)
T ss_dssp HHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCSCCHHHH
T ss_pred CcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcccCCccch
Confidence 111 22466667888999999999999999999854 4555433
No 259
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=76.89 E-value=6.3 Score=29.09 Aligned_cols=31 Identities=29% Similarity=0.547 Sum_probs=22.8
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 6 APANKIERAHQLYRDGRYEEALGFYTEALSV 36 (281)
Q Consensus 6 ~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~ 36 (281)
.+..++..|..+|+.+.|.+|+.+|.++...
T Consensus 52 ~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ 82 (106)
T 2vkj_A 52 KARSLIAEGKDLFETANYGEALVFFEKALNL 82 (106)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcchhHHHHHHHHHHcc
Confidence 3556677777777778888888777777765
No 260
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=76.70 E-value=32 Score=31.01 Aligned_cols=110 Identities=20% Similarity=0.230 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCc-----ccHHH--------HHHHHHHH-HHcCCH-----HHHHHHH
Q 023491 7 PANKIERAHQLYRDGRYEEALGFYTEALSVAKIKQ-----QKIAL--------HSNRAACY-LKLHDF-----KKAAEEC 67 (281)
Q Consensus 7 a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p-----~~~~a--------~~nra~~~-~klg~y-----~~Ai~~~ 67 (281)
....+..|-.++..|++.+|+..|..+|...+.-. ....+ -|-+|... +..... +.....+
T Consensus 102 l~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~l 181 (320)
T 3mkr_B 102 LIQRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRIC 181 (320)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHH
Confidence 34456789999999999999999999998865110 00111 23333222 111111 1211112
Q ss_pred HHH-----HHhcCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q 023491 68 TSV-----LELDYNHTG-ALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQN 116 (281)
Q Consensus 68 ~~a-----l~i~p~~~~-a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~ 116 (281)
+-+ ..+.|.|.. ++..--...++.++|..|...-++.|++.|....+..
T Consensus 182 ELAAYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~~~q 236 (320)
T 3mkr_B 182 EMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPKPEVAQQ 236 (320)
T ss_dssp HHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCCHHHHHH
T ss_pred HHHHHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHHHHH
Confidence 211 111233322 2333334578899999999999999999987554444
No 261
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=75.43 E-value=14 Score=26.50 Aligned_cols=30 Identities=27% Similarity=0.327 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 7 PANKIERAHQLYRDGRYEEALGFYTEALSV 36 (281)
Q Consensus 7 a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~ 36 (281)
+-.+..+|..+=+.|+|.+|+.+|..+|..
T Consensus 19 Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 19 ARKYAINAVKADKEGNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 344566777777778888888888888775
No 262
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=75.02 E-value=14 Score=26.33 Aligned_cols=30 Identities=23% Similarity=0.419 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 7 PANKIERAHQLYRDGRYEEALGFYTEALSV 36 (281)
Q Consensus 7 a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~ 36 (281)
+-.+..+|..+=+.|+|.+|+.+|..+|..
T Consensus 11 Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 40 (83)
T 2v6y_A 11 ARKYAILAVKADKEGKVEDAITYYKKAIEV 40 (83)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 344566777777778888888888888775
No 263
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=73.95 E-value=12 Score=27.03 Aligned_cols=30 Identities=33% Similarity=0.550 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 7 PANKIERAHQLYRDGRYEEALGFYTEALSV 36 (281)
Q Consensus 7 a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~ 36 (281)
+..+..+|..+-..|+|.+|+.+|..+|.+
T Consensus 16 A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 16 AATVLKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 445667788888889999999999988876
No 264
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=71.22 E-value=22 Score=37.32 Aligned_cols=94 Identities=14% Similarity=0.010 Sum_probs=66.8
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---hc---------------
Q 023491 13 RAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLE---LD--------------- 74 (281)
Q Consensus 13 ~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~---i~--------------- 74 (281)
....++..+.++.|..+ +.. -+.++...|.+|.+|+..|++++|..+|.++-. .+
T Consensus 818 l~~~l~~~~~~~~~~~l----~~~---~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~ 890 (1139)
T 4fhn_B 818 LVEKLFLFKQYNACMQL----IGW---LNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAE 890 (1139)
T ss_dssp HHHHHHHHSCTTHHHHH----HHH---SCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHH
T ss_pred HHHHHHHhhhHHHHHHH----hhh---ccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccc
Confidence 44556667777665542 233 455566678899999999999999999987621 11
Q ss_pred -----CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCHH
Q 023491 75 -----YNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNP-SSEV 113 (281)
Q Consensus 75 -----p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP-~~~~ 113 (281)
...+..|+....++.+.|.++-+++..+.|++..+ ++..
T Consensus 891 ~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~~~~~~ 935 (1139)
T 4fhn_B 891 KYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDED 935 (1139)
T ss_dssp TTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCCSCCHH
T ss_pred cccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccCCChh
Confidence 11234566667788899999999999999999765 4443
No 265
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=70.65 E-value=4.6 Score=37.64 Aligned_cols=65 Identities=9% Similarity=0.029 Sum_probs=55.4
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 43 KIALHSNRAACYLKLHDFKKAAEECTSVLELDY---NHTGALMLRAQTLVTLKEYNSALFDVNRLIEL 107 (281)
Q Consensus 43 ~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p---~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~l 107 (281)
...++..+|..|++.|++..|++.|.++..... .-...++..-.++...++|..+...+.++..+
T Consensus 130 ~~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~ 197 (429)
T 4b4t_R 130 QAQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSM 197 (429)
T ss_dssp CSSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 445778899999999999999999999876543 23468888888999999999999999999776
No 266
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=70.50 E-value=48 Score=34.08 Aligned_cols=70 Identities=9% Similarity=-0.044 Sum_probs=43.7
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh--------------------cCcccHHHHHHHHHHHHHcCCHHHHH
Q 023491 5 AAPANKIERAHQLYRDGRYEEALGFYTEALSVAK--------------------IKQQKIALHSNRAACYLKLHDFKKAA 64 (281)
Q Consensus 5 ~~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~--------------------~~p~~~~a~~nra~~~~klg~y~~Ai 64 (281)
.++-.-+.+|.+++..|++++|..+|.+|-.... .......+|+..+..+-+.+-|+-++
T Consensus 838 ~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi 917 (950)
T 4gq2_M 838 SDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDAL 917 (950)
T ss_dssp SSHHHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHH
Confidence 4555566777777777777777777776532110 11122345666666666777777777
Q ss_pred HHHHHHHHhc
Q 023491 65 EECTSVLELD 74 (281)
Q Consensus 65 ~~~~~al~i~ 74 (281)
..++.||...
T Consensus 918 ~fA~lAI~~~ 927 (950)
T 4gq2_M 918 EFSLLADASK 927 (950)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHhhc
Confidence 7777777643
No 267
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=70.20 E-value=17 Score=35.87 Aligned_cols=54 Identities=26% Similarity=0.250 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCCC
Q 023491 78 TGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLSLAPIP 131 (281)
Q Consensus 78 ~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~~~~~~ 131 (281)
......+|...+..|+|+.|.+.+..++..+|+|..++.+++.+.+++..+...
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~~~ 502 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQAEN 502 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhccC
Confidence 456778889999999999999999999999999999999999999988866543
No 268
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=69.92 E-value=22 Score=33.24 Aligned_cols=67 Identities=12% Similarity=0.082 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcC---c-ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 7 PANKIERAHQLYRDGRYEEALGFYTEALSVAKIK---Q-QKIALHSNRAACYLKLHDFKKAAEECTSVLEL 73 (281)
Q Consensus 7 a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~---p-~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i 73 (281)
.+.+......++..++|..|...++++....... + ....++...|..+...++|.+|..+|..++..
T Consensus 177 ve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 177 IQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 3566778889999999999999999875322111 1 34667788889999999999999999998764
No 269
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=67.39 E-value=72 Score=28.79 Aligned_cols=110 Identities=13% Similarity=0.128 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcC-----cccHHH--------HHHHHHHHHH-cCCHHHHHHHHHHHHHh
Q 023491 8 ANKIERAHQLYRDGRYEEALGFYTEALSVAKIK-----QQKIAL--------HSNRAACYLK-LHDFKKAAEECTSVLEL 73 (281)
Q Consensus 8 ~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~-----p~~~~a--------~~nra~~~~k-lg~y~~Ai~~~~~al~i 73 (281)
...+..|-.++..|+|.+|+..|..+|..++.- .....+ -|-+|...-. ..... ...-.+.+++
T Consensus 115 ~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l~--~~~~kR~lEL 192 (325)
T 3mv2_A 115 NEKMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLK--EGNTVRMLEL 192 (325)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC--TTCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--cccHHHHHHH
Confidence 345578999999999999999999999886511 111111 1222222100 00000 0011111222
Q ss_pred ---------cCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 023491 74 ---------DYNHTG-ALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQA 119 (281)
Q Consensus 74 ---------~p~~~~-a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~ 119 (281)
.|.|.. ++..--...++.++|..|....++.|++.|....+.....
T Consensus 193 AAYFT~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~a~qArk 248 (325)
T 3mv2_A 193 AAYFTKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGPRAEQARK 248 (325)
T ss_dssp HHHGGGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSHHHHHHHH
T ss_pred HHHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 222222 2333334578899999999999999999998766655433
No 270
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=66.78 E-value=21 Score=25.32 Aligned_cols=30 Identities=27% Similarity=0.344 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 7 PANKIERAHQLYRDGRYEEALGFYTEALSV 36 (281)
Q Consensus 7 a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~ 36 (281)
+..+..+|...=..|+|.+|+.+|..++.+
T Consensus 13 A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~ 42 (85)
T 2v6x_A 13 GIELVQKAIDLDTATQYEEAYTAYYNGLDY 42 (85)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 445666777777788888888888888875
No 271
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=66.59 E-value=29 Score=28.13 Aligned_cols=60 Identities=3% Similarity=-0.077 Sum_probs=42.7
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhcCCC------HHHHHH-H--HHHHHHcCCHHHHHHHHHHHHHh
Q 023491 48 SNRAACYLKLHDFKKAAEECTSVLELDYNH------TGALML-R--AQTLVTLKEYNSALFDVNRLIEL 107 (281)
Q Consensus 48 ~nra~~~~klg~y~~Ai~~~~~al~i~p~~------~~a~~~-l--g~a~~~~g~~~eAl~~~ekAL~l 107 (281)
+..|..+|..|+|-+|-+.++.+-...+.. ..++.. + |..+.+.|++..|...|.+++..
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 446777777888888888888776555433 234444 3 44556789999999999999873
No 272
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=66.57 E-value=21 Score=26.05 Aligned_cols=30 Identities=30% Similarity=0.533 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 7 PANKIERAHQLYRDGRYEEALGFYTEALSV 36 (281)
Q Consensus 7 a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~ 36 (281)
+-.++.+|..+=..|+|.+|+.+|..+|.+
T Consensus 15 Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~ 44 (93)
T 1wfd_A 15 AVAVLKRAVELDAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 344566777777778888888888887775
No 273
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=65.87 E-value=40 Score=27.27 Aligned_cols=65 Identities=11% Similarity=0.104 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcC---cccHHHHHH-HH--HHHHHcCCHHHHHHHHHHHHHh
Q 023491 9 NKIERAHQLYRDGRYEEALGFYTEALSVAKIK---QQKIALHSN-RA--ACYLKLHDFKKAAEECTSVLEL 73 (281)
Q Consensus 9 ~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~---p~~~~a~~n-ra--~~~~klg~y~~Ai~~~~~al~i 73 (281)
.-+..|..+|..|+|-+|-+.++.+-...+.. ......+.. +| ..+++.|+...|...+.+++..
T Consensus 34 ~~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 34 RAVVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 45678999999999999999998876542211 112334444 44 4445679999999999998764
No 274
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=65.43 E-value=75 Score=28.33 Aligned_cols=27 Identities=7% Similarity=-0.295 Sum_probs=23.9
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 023491 76 NHTGALMLRAQTLVTLKEYNSALFDVN 102 (281)
Q Consensus 76 ~~~~a~~~lg~a~~~~g~~~eAl~~~e 102 (281)
.++..+..+|..|...|++.+|..+|-
T Consensus 132 Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 467889999999999999999998874
No 275
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=65.14 E-value=53 Score=27.58 Aligned_cols=81 Identities=7% Similarity=-0.038 Sum_probs=58.9
Q ss_pred HHHHHHHHhhh------cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hcCCCHHHHHHHHHHHHHcCCHHHHHH
Q 023491 28 GFYTEALSVAK------IKQQKIALHSNRAACYLKLHDFKKAAEECTSVLE--LDYNHTGALMLRAQTLVTLKEYNSALF 99 (281)
Q Consensus 28 ~~y~~aL~~~~------~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~--i~p~~~~a~~~lg~a~~~~g~~~eAl~ 99 (281)
.++++++..+. +++....+|...+.++ ..+....+...|..+.. |....+..|-..|..+...|++.+|..
T Consensus 58 ~lLErc~~~F~~~~rYkND~RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~ 136 (202)
T 3esl_A 58 STMERCLIYIQDMETYRNDPRFLKIWIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKV 136 (202)
T ss_dssp HHHHHHHHHHTTCGGGTTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 56777776553 4555555555555443 12336788888887754 456677788888999999999999999
Q ss_pred HHHHHHHhCC
Q 023491 100 DVNRLIELNP 109 (281)
Q Consensus 100 ~~ekAL~ldP 109 (281)
.|+..++..-
T Consensus 137 Vy~~GI~~~A 146 (202)
T 3esl_A 137 LLELGAENNC 146 (202)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHcCC
Confidence 9999999764
No 276
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=64.36 E-value=16 Score=30.47 Aligned_cols=90 Identities=10% Similarity=0.038 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcC--cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHH
Q 023491 8 ANKIERAHQLYRDGRYEEALGFYTEALSVAKIK--QQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRA 85 (281)
Q Consensus 8 ~~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~--p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg 85 (281)
.-++-.|..++..++|.+|-.++..|+..++.. .....++..+-.+-+-+|++-. ...+.+ . .. ..|..+.
T Consensus 15 ~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP~-~~ll~~----~-~~-~~y~~L~ 87 (203)
T 3t5x_A 15 TYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPT-VELLKK----Y-HL-MQFAEVT 87 (203)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEEC-HHHHHH----T-TC-GGGHHHH
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCCC-HHHhhh----C-ch-hHHHHHH
Confidence 345677888888888888888888888874421 1222233334444456676432 222221 1 11 2466665
Q ss_pred HHHHHcCC---HHHHHHHHHHHH
Q 023491 86 QTLVTLKE---YNSALFDVNRLI 105 (281)
Q Consensus 86 ~a~~~~g~---~~eAl~~~ekAL 105 (281)
.+. +.|+ +..+++.++..+
T Consensus 88 ~Av-r~Gdl~~f~~~l~~~~~~f 109 (203)
T 3t5x_A 88 RAV-SEGNLLLLHEALAKHEAFF 109 (203)
T ss_dssp HHH-HHTCHHHHHHHHHHTHHHH
T ss_pred HHH-HhCCHHHHHHHHHHhHHHH
Confidence 543 4565 455555544433
No 277
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=64.10 E-value=43 Score=26.97 Aligned_cols=61 Identities=13% Similarity=0.110 Sum_probs=45.1
Q ss_pred HHHHH-HHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 10 KIERA-HQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLEL 73 (281)
Q Consensus 10 l~~~G-~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i 73 (281)
++..| ..+..+|.-++--..+...+.- .+..+.+++.+|.+|-++|+..+|-+.+.+|.+.
T Consensus 93 ~vd~ALd~lv~~~KkDqLdki~~~~l~n---~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 93 HVNKALDILVIQGKRDKLEEIGREILKN---NEVSASILVAIANALRRVGDERDATTLLIEACKK 154 (172)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHC-----CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhccHhHHHHHHHHHhcc---CCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHh
Confidence 44455 3445566766666666665554 6677999999999999999999999999888654
No 278
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=63.63 E-value=15 Score=25.87 Aligned_cols=25 Identities=28% Similarity=0.543 Sum_probs=13.1
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 12 ERAHQLYRDGRYEEALGFYTEALSV 36 (281)
Q Consensus 12 ~~G~~~~~~gdy~eAl~~y~~aL~~ 36 (281)
.+|..+...|++++|+.+|..||..
T Consensus 22 ~~GE~L~~~g~~~~~~~hf~nAl~V 46 (73)
T 3ax2_A 22 QLGEELLAQGDYEKGVDHLTNAIAV 46 (73)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 4455555555555555555555554
No 279
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=62.78 E-value=49 Score=30.71 Aligned_cols=45 Identities=13% Similarity=0.011 Sum_probs=35.9
Q ss_pred HHHHHHHHHHhc-----CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 63 AAEECTSVLELD-----YNHTGALMLRAQTLVTLKEYNSALFDVNRLIEL 107 (281)
Q Consensus 63 Ai~~~~~al~i~-----p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~l 107 (281)
++..|.++|... ..+.-.|..+|..+++.+++.+|++.+-.|-..
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~V 325 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGYV 325 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHHH
Confidence 667777776553 456778899999999999999999999877664
No 280
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=59.83 E-value=21 Score=29.72 Aligned_cols=54 Identities=17% Similarity=0.082 Sum_probs=37.1
Q ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHH-----HHHHHHHHHHHcCCHH
Q 023491 42 QKIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTG-----ALMLRAQTLVTLKEYN 95 (281)
Q Consensus 42 ~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~-----a~~~lg~a~~~~g~~~ 95 (281)
.....+|.+|..++..++|.+|..++..|++..|.... ++-.+-.+..-+|++.
T Consensus 12 q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP 70 (203)
T 3t5x_A 12 QRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMP 70 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCC
Confidence 34667788888888888888888888888888776543 2333333445566654
No 281
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=59.43 E-value=12 Score=28.62 Aligned_cols=17 Identities=47% Similarity=0.868 Sum_probs=6.9
Q ss_pred HcCCHHHHHHHHHHHHH
Q 023491 19 RDGRYEEALGFYTEALS 35 (281)
Q Consensus 19 ~~gdy~eAl~~y~~aL~ 35 (281)
..|+|.+|+.+|..+|.
T Consensus 30 ~ag~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 30 KAGNYEEALQLYQHAVQ 46 (117)
T ss_dssp HHTCHHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHH
Confidence 33444444444443333
No 282
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=59.29 E-value=1e+02 Score=27.84 Aligned_cols=26 Identities=12% Similarity=0.045 Sum_probs=23.3
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHH
Q 023491 76 NHTGALMLRAQTLVTLKEYNSALFDV 101 (281)
Q Consensus 76 ~~~~a~~~lg~a~~~~g~~~eAl~~~ 101 (281)
.++..+..+|.+|.+.+++.+|...|
T Consensus 134 Gdp~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 134 GDPELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHccCCHHHHHHHH
Confidence 46788999999999999999998887
No 283
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=59.18 E-value=68 Score=33.85 Aligned_cols=76 Identities=7% Similarity=-0.062 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----cCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCCHHHHHH
Q 023491 44 IALHSNRAACYLKLHDFKKAAEECTSVLEL----DYNHTGALMLRAQTLVTLKEYNSALFDVNRLIEL--NPSSEVYQNL 117 (281)
Q Consensus 44 ~~a~~nra~~~~klg~y~~Ai~~~~~al~i----~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~l--dP~~~~a~~~ 117 (281)
...|..+-.+|.+.|+.++|...|....++ -..+...|--+-..|++.|++++|+..|.+..+. .|+...+-.+
T Consensus 127 ~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntL 206 (1134)
T 3spa_A 127 QQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAA 206 (1134)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHH
Confidence 445777888999999999999999765332 3458888899999999999999999999988874 4654444444
Q ss_pred HH
Q 023491 118 QA 119 (281)
Q Consensus 118 l~ 119 (281)
+.
T Consensus 207 I~ 208 (1134)
T 3spa_A 207 LQ 208 (1134)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 284
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=56.80 E-value=19 Score=35.63 Aligned_cols=46 Identities=15% Similarity=0.130 Sum_probs=29.8
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCC
Q 023491 48 SNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKE 93 (281)
Q Consensus 48 ~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~ 93 (281)
..+|...+..|+|.-|.+.+..++..+|++..+...++.+|.++|.
T Consensus 453 ~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~ 498 (658)
T 2cfu_A 453 LEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGY 498 (658)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 3455555666666666666666666666666666666666666653
No 285
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=56.06 E-value=20 Score=26.53 Aligned_cols=27 Identities=19% Similarity=0.145 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 023491 44 IALHSNRAACYLKLHDFKKAAEECTSV 70 (281)
Q Consensus 44 ~~a~~nra~~~~klg~y~~Ai~~~~~a 70 (281)
+..+-.+|..+++.|.|++||++..++
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kA 41 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKA 41 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHH
Confidence 555666777777777777777777666
No 286
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=55.60 E-value=71 Score=30.17 Aligned_cols=61 Identities=10% Similarity=-0.082 Sum_probs=42.3
Q ss_pred HHHHHHHHHHhc-----CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHH
Q 023491 63 AAEECTSVLELD-----YNHTGALMLRAQTLVTLKEYNSALFDVNRLIEL------NPSSEVYQNLQARLKT 123 (281)
Q Consensus 63 Ai~~~~~al~i~-----p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~l------dP~~~~a~~~l~~l~~ 123 (281)
++..|.++|... ..+.-.|..+|..|++.+++.+|+..+-.|-.. ..++.++...+-.|..
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~eIAn 369 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFEVAN 369 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHH
Confidence 566666666542 456778999999999999999999999877664 2235555544444433
No 287
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=55.49 E-value=2.5 Score=35.53 Aligned_cols=20 Identities=15% Similarity=-0.095 Sum_probs=1.5
Q ss_pred CCCCCCCCCCccccccccCC
Q 023491 235 IPKPKGHSTLDYARWDRVED 254 (281)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~ 254 (281)
+..-.|.+.|+|+.++.-+|
T Consensus 253 ~~~~~g~tpl~~a~~~~~~~ 272 (282)
T 1oy3_D 253 EDGGDKLSPCSSSGSDSDSD 272 (282)
T ss_dssp CCC-----------------
T ss_pred cCCCcccccccccCCccccc
Confidence 45567899999999987433
No 288
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=53.85 E-value=22 Score=26.28 Aligned_cols=25 Identities=28% Similarity=0.543 Sum_probs=15.7
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 12 ERAHQLYRDGRYEEALGFYTEALSV 36 (281)
Q Consensus 12 ~~G~~~~~~gdy~eAl~~y~~aL~~ 36 (281)
.+|-.++..|+++.|+.+|..||..
T Consensus 25 ~lGE~L~~~g~~e~av~Hf~nAl~V 49 (95)
T 1om2_A 25 QLGEELLAQGDYEKGVDHLTNAIAV 49 (95)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 4566666666666666666666665
No 289
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=53.85 E-value=19 Score=26.59 Aligned_cols=25 Identities=36% Similarity=0.559 Sum_probs=18.0
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 12 ERAHQLYRDGRYEEALGFYTEALSV 36 (281)
Q Consensus 12 ~~G~~~~~~gdy~eAl~~y~~aL~~ 36 (281)
-++..+.+.|.|++||.++.+|..+
T Consensus 20 RrAe~ll~~gkydeAIech~kAa~y 44 (97)
T 2crb_A 20 RRADRLLAAGKYEEAISCHRKATTY 44 (97)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 5666777777777777777777664
No 290
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=53.54 E-value=52 Score=26.63 Aligned_cols=77 Identities=6% Similarity=0.010 Sum_probs=54.4
Q ss_pred HHHHHHHHHhhh------cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hcCCCHHHHHHHHHHHHHcCCHHHHH
Q 023491 27 LGFYTEALSVAK------IKQQKIALHSNRAACYLKLHDFKKAAEECTSVLE--LDYNHTGALMLRAQTLVTLKEYNSAL 98 (281)
Q Consensus 27 l~~y~~aL~~~~------~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~--i~p~~~~a~~~lg~a~~~~g~~~eAl 98 (281)
..++++++..+. +++....+|...+.+. ..+...|..+.. |....+..|-..|..+...|++..|.
T Consensus 43 ~~lLErc~~~f~~~~~YknD~RyLklWl~ya~~~------~~p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~ 116 (164)
T 2wvi_A 43 STLLERAVEALQGEKRYYSDPRFLNLWLKLGRLC------NEPLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKAD 116 (164)
T ss_dssp HHHHHHHHHHTTTCGGGTTCHHHHHHHHHHHHHC------SCHHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHhhhhhhhccCHHHHHHHHHHHHhc------CCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHH
Confidence 445666666543 4555555565555442 336666666654 45567778888899999999999999
Q ss_pred HHHHHHHHhCC
Q 023491 99 FDVNRLIELNP 109 (281)
Q Consensus 99 ~~~ekAL~ldP 109 (281)
..|+..++...
T Consensus 117 ~Iy~~Gi~~~A 127 (164)
T 2wvi_A 117 AIFQEGIQQKA 127 (164)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHcCC
Confidence 99999999764
No 291
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=53.47 E-value=33 Score=32.46 Aligned_cols=48 Identities=15% Similarity=0.186 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHhcCC-----------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 60 FKKAAEECTSVLELDYN-----------HTGALMLRAQTLVTLKEYNSALFDVNRLIEL 107 (281)
Q Consensus 60 y~~Ai~~~~~al~i~p~-----------~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~l 107 (281)
|+..+.+|..|+..-|. ...|+..+|.+|+.+++|++|+...+.++..
T Consensus 153 ~~~I~~dL~~A~~~Lp~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 153 YDFILEDLKKATEMLPASYGSREKGRATKGAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHHSCSCCCSTTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCccccCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 66677888888776543 1248899999999999999999999999853
No 292
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=52.73 E-value=39 Score=23.65 Aligned_cols=32 Identities=9% Similarity=0.172 Sum_probs=19.4
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 023491 83 LRAQTLVTLKEYNSALFDVNRLIELNPSSEVY 114 (281)
Q Consensus 83 ~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a 114 (281)
.+|-.+...|++++|+.+|-+|+..-|.-...
T Consensus 22 ~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~L 53 (73)
T 3ax2_A 22 QLGEELLAQGDYEKGVDHLTNAIAVCGQPQQL 53 (73)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHH
Confidence 35666666666666666666666666554433
No 293
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=51.72 E-value=39 Score=31.62 Aligned_cols=48 Identities=17% Similarity=0.005 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHhcCC-----------------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 60 FKKAAEECTSVLELDYN-----------------------HTGALMLRAQTLVTLKEYNSALFDVNRLIEL 107 (281)
Q Consensus 60 y~~Ai~~~~~al~i~p~-----------------------~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~l 107 (281)
|+..+.++..|+..-|. ..-|+..+|.+|+.+|+|++|+...++++..
T Consensus 156 y~~I~~DL~~A~~~Lp~~~~~~~~~~~~~~~~~~~~~r~tk~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 156 LSYAKAELLTAIEDLPYQYGTQTNLYYGSYGAQWQGKLFNKLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHHCCSSCCCSSSCBTTBCGGGGTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCccccccccccccccccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 66677888888765432 1348889999999999999999999998864
No 294
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=51.32 E-value=36 Score=29.26 Aligned_cols=48 Identities=21% Similarity=0.293 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHhh-----hcCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Q 023491 24 EEALGFYTEALSVA-----KIKQQKIALHSNRAACYLK-LHDFKKAAEECTSVL 71 (281)
Q Consensus 24 ~eAl~~y~~aL~~~-----~~~p~~~~a~~nra~~~~k-lg~y~~Ai~~~~~al 71 (281)
+.|...|+.|+.++ +.+|....+.+|.+..|+. +++.++|......+|
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~af 200 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAF 200 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 45667777777654 2566666777777777765 778888777777764
No 295
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=50.29 E-value=35 Score=31.76 Aligned_cols=30 Identities=20% Similarity=0.094 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 78 TGALMLRAQTLVTLKEYNSALFDVNRLIEL 107 (281)
Q Consensus 78 ~~a~~~lg~a~~~~g~~~eAl~~~ekAL~l 107 (281)
..|+..+|.+|+.+|+|++|+...+.++..
T Consensus 190 ~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 190 YAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 457777888888888888888888888754
No 296
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=49.81 E-value=46 Score=26.60 Aligned_cols=78 Identities=10% Similarity=-0.038 Sum_probs=51.9
Q ss_pred HHHHHHHHHHhhh------cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hcCCCHHHHHHHHHHHHHcCCHHHH
Q 023491 26 ALGFYTEALSVAK------IKQQKIALHSNRAACYLKLHDFKKAAEECTSVLE--LDYNHTGALMLRAQTLVTLKEYNSA 97 (281)
Q Consensus 26 Al~~y~~aL~~~~------~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~--i~p~~~~a~~~lg~a~~~~g~~~eA 97 (281)
-..++++++..+. +++....+|...+.. ...+...|..+.. |....+..|-..|..+...|++.+|
T Consensus 47 l~~lLErc~~~f~~~~~YknD~RyLklWl~ya~~------~~dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A 120 (152)
T 4a1g_A 47 LITLLEHLMKEFLDKKKYHNDPRFISYCLKFAEY------NSDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHA 120 (152)
T ss_dssp HHHHHHHHHHHHTTCGGGTTCHHHHHHHHHHHTT------BSCHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHhcccccccCCHHHHHHHHHHHHh------cCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHH
Confidence 3455566655542 344444444444432 2336777766653 4456677788889999999999999
Q ss_pred HHHHHHHHHhCC
Q 023491 98 LFDVNRLIELNP 109 (281)
Q Consensus 98 l~~~ekAL~ldP 109 (281)
...|+..++...
T Consensus 121 ~~Vy~~Gi~~~A 132 (152)
T 4a1g_A 121 SAVLQRGIQNQA 132 (152)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC
Confidence 999999998753
No 297
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=49.08 E-value=42 Score=32.01 Aligned_cols=48 Identities=21% Similarity=0.194 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHhcCC-------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 60 FKKAAEECTSVLELDYN-------------HTGALMLRAQTLVTLKEYNSALFDVNRLIEL 107 (281)
Q Consensus 60 y~~Ai~~~~~al~i~p~-------------~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~l 107 (281)
|+..+.+|..|+..-|. ...|+..+|.+++.+++|++|+.....++..
T Consensus 167 ~~~I~~DL~~A~~~Lp~~~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 227 (528)
T 3i4g_A 167 LKWCVTEFTAAAADLPRFSAIPAGEAGRACKQAALAFLGRTCMLQKDWKSGAKAFHDIMEL 227 (528)
T ss_dssp HHHHHHHHHHHHHHSCCGGGCCGGGTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCccccCCcccCCcCcHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 56677778888776552 1248899999999999999999999998864
No 298
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=48.31 E-value=27 Score=32.84 Aligned_cols=64 Identities=16% Similarity=0.095 Sum_probs=48.7
Q ss_pred cHHHHHHHHHHHHHcCC----------------------------HHHHHHHHHHHHHhcCC--------CHHHHHHHHH
Q 023491 43 KIALHSNRAACYLKLHD----------------------------FKKAAEECTSVLELDYN--------HTGALMLRAQ 86 (281)
Q Consensus 43 ~~~a~~nra~~~~klg~----------------------------y~~Ai~~~~~al~i~p~--------~~~a~~~lg~ 86 (281)
...+++.||.+|+.+-+ |+..+.++..|+..-|. ..-|+..+|.
T Consensus 109 ~aEa~flRA~~yf~L~~~fG~VP~~~~~~~~~~~~~~~r~~~~evy~~I~~DL~~A~~~Lp~~~~~gr~tk~aA~allar 188 (481)
T 3jq1_A 109 KGECLFIRGFYLFQLAKEFKDAPLRLTASQSPSTFPLAKSSQADIWAQAKEDLKTAASLLPITNKIGKPTQGAAYAALGK 188 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSEECCCCCCSSCCCSCCCEECHHHHHHHHHHHHHHHHHHSCSSCSTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeeeccCCCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHHH
Confidence 46777778887776432 67788888888876542 2348889999
Q ss_pred HHHHcCCHHHHHHHHHHHHH
Q 023491 87 TLVTLKEYNSALFDVNRLIE 106 (281)
Q Consensus 87 a~~~~g~~~eAl~~~ekAL~ 106 (281)
+|+.+++|++|+...+.++.
T Consensus 189 vyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 189 IYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHHTTCHHHHHHHHGGGGS
T ss_pred HHHHHhHHHHHHHHHHHHHh
Confidence 99999999999998887763
No 299
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=47.48 E-value=1.3e+02 Score=25.59 Aligned_cols=55 Identities=16% Similarity=0.117 Sum_probs=43.9
Q ss_pred HcCCHHHHHHHHHHHHHhh-----hcCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Q 023491 19 RDGRYEEALGFYTEALSVA-----KIKQQKIALHSNRAACYLK-LHDFKKAAEECTSVLEL 73 (281)
Q Consensus 19 ~~gdy~eAl~~y~~aL~~~-----~~~p~~~~a~~nra~~~~k-lg~y~~Ai~~~~~al~i 73 (281)
..|+-+.|...|+.|..++ +.+|....+.+|.+..|+. +++.++|......|+.+
T Consensus 137 ~~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~ 197 (227)
T 2o8p_A 137 GLCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKI 197 (227)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 3566788899999988765 3788888888888888874 88899999888888653
No 300
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=47.13 E-value=44 Score=29.17 Aligned_cols=48 Identities=21% Similarity=0.301 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHhh-----hcCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Q 023491 24 EEALGFYTEALSVA-----KIKQQKIALHSNRAACYLK-LHDFKKAAEECTSVL 71 (281)
Q Consensus 24 ~eAl~~y~~aL~~~-----~~~p~~~~a~~nra~~~~k-lg~y~~Ai~~~~~al 71 (281)
+.|...|+.|+.++ +.+|....+.+|.+..|+. +++.++|......+|
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Af 205 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 45677788887665 2566667777777777775 688888887777764
No 301
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=46.84 E-value=40 Score=31.43 Aligned_cols=30 Identities=27% Similarity=0.226 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 78 TGALMLRAQTLVTLKEYNSALFDVNRLIEL 107 (281)
Q Consensus 78 ~~a~~~lg~a~~~~g~~~eAl~~~ekAL~l 107 (281)
.-++..+|.+|+.+|+|++|+.....++..
T Consensus 196 ~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 196 WAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 356777777777778888888777777753
No 302
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=46.71 E-value=69 Score=31.34 Aligned_cols=113 Identities=11% Similarity=-0.080 Sum_probs=66.1
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhhhcCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 023491 12 ERAHQLYRDGRYEEALGFYTEALSVAKIKQQ-KIALHSNRAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVT 90 (281)
Q Consensus 12 ~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~-~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~ 90 (281)
..|...+..++...|...|..........+. ....+..+|..++..+...++...+..++....+.....+..+.++ +
T Consensus 219 ~~~~~rlar~d~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~r~Al-r 297 (618)
T 1qsa_A 219 AVAFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRMAL-G 297 (618)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCCHHHHHHHHHHHH-H
T ss_pred HHHHHHHHhcCHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCChHHHHHHHHHHH-H
Confidence 3455566677889999988877543111111 1222333333334444356777778776654444333444445554 6
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 023491 91 LKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQL 125 (281)
Q Consensus 91 ~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l 125 (281)
.|++..|...|.++-.-.........|+++....+
T Consensus 298 ~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~ 332 (618)
T 1qsa_A 298 TGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLER 332 (618)
T ss_dssp HTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHccccccccHhHHHHHHHHHHHc
Confidence 69999999998765443234566677887765443
No 303
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=46.51 E-value=77 Score=22.58 Aligned_cols=24 Identities=13% Similarity=-0.103 Sum_probs=10.7
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHH
Q 023491 47 HSNRAACYLKLHDFKKAAEECTSV 70 (281)
Q Consensus 47 ~~nra~~~~klg~y~~Ai~~~~~a 70 (281)
+..+|.-.-..|+|.+|+..|..+
T Consensus 19 lv~~Ave~D~~g~y~eAl~lY~~A 42 (86)
T 4a5x_A 19 VLKRAVELDSESRYPQALVCYQEG 42 (86)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHH
Confidence 334444444444444444444444
No 304
>2npu_A FKBP12-rapamycin complex-associated protein; four-helix bundle, transferase; NMR {Homo sapiens}
Probab=46.32 E-value=58 Score=25.22 Aligned_cols=77 Identities=9% Similarity=-0.038 Sum_probs=47.8
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHhh
Q 023491 50 RAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPS--SEVYQNLQARLKTQLS 126 (281)
Q Consensus 50 ra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~--~~~a~~~l~~l~~~l~ 126 (281)
.+.+|+..++..+.+..+..+...-...+.+..-.+.+..--.++.+|..++++..+..-. -..++..+..|-+.+.
T Consensus 46 ASrlyf~~~n~~~m~~~L~pLh~~l~~~PeT~~E~sF~~~fG~~L~~A~~~~~~y~~t~d~~~lnqAWd~Y~~Vf~rI~ 124 (126)
T 2npu_A 46 ASRLYFGERNVKGMFEVLEPLHAMMERGPQTLKETSFNQAYGRDLMEAQEWCRKYMKSGNVKDLTQAWDLYYHVFRRIS 124 (126)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcccCHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHh
Confidence 5567778999999999887763322222333344444444446788888888888755422 1256666666666554
No 305
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=46.09 E-value=86 Score=23.02 Aligned_cols=48 Identities=17% Similarity=0.264 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHhh
Q 023491 78 TGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEV----YQNLQARLKTQLS 126 (281)
Q Consensus 78 ~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~----a~~~l~~l~~~l~ 126 (281)
++.+..-|.-+++.++|.+|+..|+++..+. +|+. +...++.|++.+.
T Consensus 53 ~r~~i~eak~~y~~~ny~ea~~l~~k~~n~t-en~~i~ki~~fyl~ec~kkla 104 (106)
T 2vkj_A 53 ARSLIAEGKDLFETANYGEALVFFEKALNLS-DNEEIKKIASFYLEECRKKLA 104 (106)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcchhHHHHHHHHHHccc-cCHHHHHHHHHHHHHHHHHhc
Confidence 3455556777888889999998888888765 3332 3355677776654
No 306
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=45.54 E-value=49 Score=28.67 Aligned_cols=48 Identities=17% Similarity=0.246 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHhh-----hcCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Q 023491 24 EEALGFYTEALSVA-----KIKQQKIALHSNRAACYLK-LHDFKKAAEECTSVL 71 (281)
Q Consensus 24 ~eAl~~y~~aL~~~-----~~~p~~~~a~~nra~~~~k-lg~y~~Ai~~~~~al 71 (281)
+.|...|+.|+.++ +.+|....+.+|.+..|+. +++.++|......||
T Consensus 148 ~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Af 201 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAF 201 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 45666677776654 2566666666777766665 677777766666653
No 307
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=45.32 E-value=40 Score=31.46 Aligned_cols=31 Identities=23% Similarity=0.253 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 023491 78 TGALMLRAQTLVTLKEYNSALFDVNRLIELN 108 (281)
Q Consensus 78 ~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ld 108 (281)
.-|+..+|.+|+.+|+|++|+.....++...
T Consensus 202 ~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 232 (477)
T 3mcx_A 202 WAAQALLSRVYLNMGEYQKAYDAATDVIKNN 232 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhCC
Confidence 3577777888888888888888888777653
No 308
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=44.59 E-value=37 Score=31.49 Aligned_cols=46 Identities=20% Similarity=0.247 Sum_probs=35.4
Q ss_pred HHHHHHHHHHhhh--cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 023491 26 ALGFYTEALSVAK--IKQQKIALHSNRAACYLKLHDFKKAAEECTSVL 71 (281)
Q Consensus 26 Al~~y~~aL~~~~--~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al 71 (281)
++.+|.+||.... -...+.--|..+|-++++.++|.+|+..+..+-
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa 323 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAG 323 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHH
Confidence 7888888888754 223345556778889999999999999987763
No 309
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=44.51 E-value=76 Score=29.89 Aligned_cols=65 Identities=9% Similarity=-0.013 Sum_probs=47.5
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhhh-------cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-cCCC
Q 023491 13 RAHQLYRDGRYEEALGFYTEALSVAK-------IKQQKIALHSNRAACYLKLHDFKKAAEECTSVLEL-DYNH 77 (281)
Q Consensus 13 ~G~~~~~~gdy~eAl~~y~~aL~~~~-------~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i-~p~~ 77 (281)
.-..||+.+....|-..+...-.... ........+|.+|..++..++|.+|..++..|++. .|..
T Consensus 182 L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 182 LNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 34678888888888777654322100 11245778899999999999999999999999998 6644
No 310
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=44.15 E-value=1.8e+02 Score=26.30 Aligned_cols=91 Identities=14% Similarity=0.156 Sum_probs=62.8
Q ss_pred HHHHcCCHHHHHHHHHHHHHhhh--------------cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------c
Q 023491 16 QLYRDGRYEEALGFYTEALSVAK--------------IKQQKIALHSNRAACYLKLHDFKKAAEECTSVLEL-------D 74 (281)
Q Consensus 16 ~~~~~gdy~eAl~~y~~aL~~~~--------------~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i-------~ 74 (281)
+.-...+..+|++.+........ .......+....+..|+..|++..|...++++-.. +
T Consensus 85 ~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~ 164 (393)
T 4b4t_O 85 SLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIP 164 (393)
T ss_dssp HHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSS
T ss_pred HHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCcc
Confidence 34456789999998887644321 00122445567788899999999999999887432 1
Q ss_pred C-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023491 75 Y-NHTGALMLRAQTLVTLKEYNSALFDVNRLIE 106 (281)
Q Consensus 75 p-~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ 106 (281)
+ -+...|+..+..+...++|..+...+-.++.
T Consensus 165 ~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~ 197 (393)
T 4b4t_O 165 LRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLS 197 (393)
T ss_dssp SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 2 1334566667888889999998888777775
No 311
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=43.97 E-value=54 Score=28.68 Aligned_cols=48 Identities=21% Similarity=0.293 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHhh-----hcCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Q 023491 24 EEALGFYTEALSVA-----KIKQQKIALHSNRAACYLK-LHDFKKAAEECTSVL 71 (281)
Q Consensus 24 ~eAl~~y~~aL~~~-----~~~p~~~~a~~nra~~~~k-lg~y~~Ai~~~~~al 71 (281)
+.|...|+.|+.++ +.+|....+.+|.+..|+. +++.++|......||
T Consensus 173 e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AF 226 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAF 226 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 45667788877654 2567777777777777775 688888877777764
No 312
>3rau_A Tyrosine-protein phosphatase non-receptor type 23; BRO1 domain, hydrolase; 1.95A {Homo sapiens}
Probab=43.50 E-value=1.8e+02 Score=26.15 Aligned_cols=27 Identities=4% Similarity=0.080 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023491 80 ALMLRAQTLVTLKEYNSALFDVNRLIE 106 (281)
Q Consensus 80 a~~~lg~a~~~~g~~~eAl~~~ekAL~ 106 (281)
++|..|......+++.+|+..|+.|+.
T Consensus 254 A~y~~a~~~~e~~k~GeaIa~L~~A~~ 280 (363)
T 3rau_A 254 AHLHMGKQAEEQQKFGERVAYFQSALD 280 (363)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHhhhHHHHHHHHHHHHH
Confidence 566777777778889999888877664
No 313
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=43.50 E-value=51 Score=31.07 Aligned_cols=30 Identities=10% Similarity=0.131 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 78 TGALMLRAQTLVTLKEYNSALFDVNRLIEL 107 (281)
Q Consensus 78 ~~a~~~lg~a~~~~g~~~eAl~~~ekAL~l 107 (281)
.-|+..+|.+|+.+|+|++|+.....++..
T Consensus 203 ~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 203 EVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 457777788888888888888888888765
No 314
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=43.20 E-value=91 Score=22.46 Aligned_cols=10 Identities=10% Similarity=0.019 Sum_probs=4.0
Q ss_pred HHHHHHHHHH
Q 023491 62 KAAEECTSVL 71 (281)
Q Consensus 62 ~Ai~~~~~al 71 (281)
.|+..+.+|+
T Consensus 14 ~Ai~lv~~Av 23 (93)
T 1wfd_A 14 AAVAVLKRAV 23 (93)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3444444443
No 315
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=43.18 E-value=77 Score=22.98 Aligned_cols=55 Identities=9% Similarity=-0.010 Sum_probs=27.9
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhcCCC----HHHHHHH--HHHHHHcCCHHHHHHHHHHHHH
Q 023491 50 RAACYLKLHDFKKAAEECTSVLELDYNH----TGALMLR--AQTLVTLKEYNSALFDVNRLIE 106 (281)
Q Consensus 50 ra~~~~klg~y~~Ai~~~~~al~i~p~~----~~a~~~l--g~a~~~~g~~~eAl~~~ekAL~ 106 (281)
.|..++..|+|-+|-+.++.+-...+.. ...+..+ |..+.+.|+. |...|.+++.
T Consensus 7 ~~~~lfn~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 7 EVLGLWRAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHhCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 4444555555555555555554444221 1223333 3344456666 7777777766
No 316
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=42.13 E-value=37 Score=24.17 Aligned_cols=22 Identities=14% Similarity=0.004 Sum_probs=11.2
Q ss_pred HHHHHHHcCCHHHHHHHHHHHH
Q 023491 50 RAACYLKLHDFKKAAEECTSVL 71 (281)
Q Consensus 50 ra~~~~klg~y~~Ai~~~~~al 71 (281)
+|.-.-+.|+|.+|+..|..+|
T Consensus 25 ~Ave~D~~g~y~eAl~lY~~ai 46 (83)
T 2w2u_A 25 NAVKADKEGNAEEAITNYKKAI 46 (83)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHH
Confidence 3333345555555555555543
No 317
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=42.04 E-value=65 Score=23.39 Aligned_cols=59 Identities=19% Similarity=0.074 Sum_probs=38.9
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhhhcCc--ccHHHHHHHHHH--HHHcCCHHHHHHHHHHHHH
Q 023491 11 IERAHQLYRDGRYEEALGFYTEALSVAKIKQ--QKIALHSNRAAC--YLKLHDFKKAAEECTSVLE 72 (281)
Q Consensus 11 ~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p--~~~~a~~nra~~--~~klg~y~~Ai~~~~~al~ 72 (281)
+..|..+|..|+|-+|-+.++.+-...+ .+ .....+..+|.+ +++.|+. |...+.+++.
T Consensus 5 ~~~~~~lfn~g~~~eaHEvlE~~W~~~~-~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 5 WEEVLGLWRAGRYYEVHEVLEPYWLKAT-GEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHhhCC-CchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 4578999999999999999988766521 11 112333444433 3456676 7777777765
No 318
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.88 E-value=25 Score=26.97 Aligned_cols=15 Identities=33% Similarity=0.235 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHHHhc
Q 023491 60 FKKAAEECTSVLELD 74 (281)
Q Consensus 60 y~~Ai~~~~~al~i~ 74 (281)
|++|..++.++|.++
T Consensus 19 h~~AF~~Is~AL~~D 33 (116)
T 2dl1_A 19 YKKAFLFVNKGLNTD 33 (116)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhh
Confidence 445555555555554
No 319
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=41.64 E-value=61 Score=27.84 Aligned_cols=48 Identities=15% Similarity=0.205 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHhh-----hcCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Q 023491 24 EEALGFYTEALSVA-----KIKQQKIALHSNRAACYLK-LHDFKKAAEECTSVL 71 (281)
Q Consensus 24 ~eAl~~y~~aL~~~-----~~~p~~~~a~~nra~~~~k-lg~y~~Ai~~~~~al 71 (281)
+.|...|+.|+.++ |.+|....+.+|.+..|+. +++.++|......||
T Consensus 150 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Af 203 (236)
T 3iqu_A 150 DSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTF 203 (236)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 55677788887654 2667777777888877774 688888887777764
No 320
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=41.27 E-value=42 Score=31.19 Aligned_cols=13 Identities=15% Similarity=0.076 Sum_probs=7.3
Q ss_pred HHHHHHHHHHHHH
Q 023491 44 IALHSNRAACYLK 56 (281)
Q Consensus 44 ~~a~~nra~~~~k 56 (281)
..+++.||.+|+.
T Consensus 111 gEa~flRA~~yf~ 123 (454)
T 3myv_A 111 GETMAVIALCQFD 123 (454)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4555556665554
No 321
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=41.19 E-value=44 Score=31.58 Aligned_cols=46 Identities=15% Similarity=0.229 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHhhh--cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 023491 25 EALGFYTEALSVAK--IKQQKIALHSNRAACYLKLHDFKKAAEECTSV 70 (281)
Q Consensus 25 eAl~~y~~aL~~~~--~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~a 70 (281)
.++.+|.+||..+. -...+.--|..+|-+|++.++|.+|+..+..+
T Consensus 297 ~~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~A 344 (550)
T 3u84_A 297 DPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADT 344 (550)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHH
Confidence 36778888887654 22334555677888999999999999988766
No 322
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=40.45 E-value=71 Score=30.01 Aligned_cols=14 Identities=29% Similarity=0.176 Sum_probs=8.5
Q ss_pred cHHHHHHHHHHHHH
Q 023491 43 KIALHSNRAACYLK 56 (281)
Q Consensus 43 ~~~a~~nra~~~~k 56 (281)
...+++.||.+|+.
T Consensus 118 ~gEA~flRA~~Yf~ 131 (495)
T 3lew_A 118 KGQALALRGFLYLH 131 (495)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 35566666666664
No 323
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=40.40 E-value=47 Score=23.52 Aligned_cols=16 Identities=13% Similarity=-0.082 Sum_probs=8.3
Q ss_pred HHcCCHHHHHHHHHHH
Q 023491 55 LKLHDFKKAAEECTSV 70 (281)
Q Consensus 55 ~klg~y~~Ai~~~~~a 70 (281)
=+.|+|.+|+..|..+
T Consensus 22 D~~g~y~eAl~lY~~a 37 (83)
T 2v6y_A 22 DKEGKVEDAITYYKKA 37 (83)
T ss_dssp HHTTCHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHH
Confidence 3455555555555444
No 324
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=40.39 E-value=66 Score=28.08 Aligned_cols=49 Identities=24% Similarity=0.310 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHhh----hcCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Q 023491 24 EEALGFYTEALSVA----KIKQQKIALHSNRAACYLK-LHDFKKAAEECTSVLE 72 (281)
Q Consensus 24 ~eAl~~y~~aL~~~----~~~p~~~~a~~nra~~~~k-lg~y~~Ai~~~~~al~ 72 (281)
+.|...|+.|+.++ +.+|....+.+|.+..|+. +++.++|......+|.
T Consensus 173 e~a~~aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 173 EDALKAYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 45667777777653 3556666677777777775 7788888777777753
No 325
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=39.89 E-value=47 Score=31.30 Aligned_cols=31 Identities=16% Similarity=0.005 Sum_probs=20.1
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023491 76 NHTGALMLRAQTLVTLKEYNSALFDVNRLIE 106 (281)
Q Consensus 76 ~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ 106 (281)
.+.-.|..+|-.+++.++|.+|++.|-.+-.
T Consensus 301 ~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~ 331 (489)
T 4gq4_A 301 EHIYPYMYLAGYHCRNRNVREALQAWADTAT 331 (489)
T ss_dssp CCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CcccceeecchHHHHhhhHHHHHHHhhhhhh
Confidence 4555666666677777777777776665544
No 326
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=39.23 E-value=70 Score=29.69 Aligned_cols=12 Identities=33% Similarity=0.393 Sum_probs=6.8
Q ss_pred CCCCCccccccc
Q 023491 240 GHSTLDYARWDR 251 (281)
Q Consensus 240 ~~~~~~~~~~~~ 251 (281)
||.-.|+-||.+
T Consensus 396 G~R~~DL~R~~~ 407 (461)
T 3kez_A 396 GHRMYDVIRNGM 407 (461)
T ss_dssp TCHHHHHHTTTC
T ss_pred chhHHHHHHhCC
Confidence 555555555553
No 327
>3otn_A SUSD superfamily protein; putative outer membrane protein, carbohydrate binding, structural genomics; HET: MSE; 1.95A {Parabacteroides distasonis}
Probab=38.71 E-value=36 Score=31.93 Aligned_cols=47 Identities=11% Similarity=0.018 Sum_probs=36.6
Q ss_pred HH-HHHHHHHHHHHh-cC--------CCHHHHHHHHHHHHHcC---------CHHHHHHHHHHHHH
Q 023491 60 FK-KAAEECTSVLEL-DY--------NHTGALMLRAQTLVTLK---------EYNSALFDVNRLIE 106 (281)
Q Consensus 60 y~-~Ai~~~~~al~i-~p--------~~~~a~~~lg~a~~~~g---------~~~eAl~~~ekAL~ 106 (281)
|+ ..+.++..|+.. -| ....|+..+|.+|+.++ +|++|+.....++.
T Consensus 160 y~~~I~~DL~~A~~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~~~~~~~~~~A~~~a~~vi~ 225 (482)
T 3otn_A 160 YDEIIIPDLLEAEQSDLAFSDHTGRVSMGAVKALLADVYLTYAGYPLQGGKSYYAESAKRSLEVIK 225 (482)
T ss_dssp HHHTHHHHHHHHHTSCCCSCCSSSCCCHHHHHHHHHHHHHHHHSTTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCcCcCCcCcHHHHHHHHHHHHHHhCCCcccCcHHHHHHHHHHHHHHHc
Confidence 66 677788888876 33 22358889999999888 89999999888876
No 328
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=38.41 E-value=1e+02 Score=21.59 Aligned_cols=15 Identities=13% Similarity=0.127 Sum_probs=6.2
Q ss_pred cCCHHHHHHHHHHHH
Q 023491 91 LKEYNSALFDVNRLI 105 (281)
Q Consensus 91 ~g~~~eAl~~~ekAL 105 (281)
.|+|.+|+..|..++
T Consensus 26 ~g~y~eAl~~Y~~ai 40 (85)
T 2v6x_A 26 ATQYEEAYTAYYNGL 40 (85)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 344444444443333
No 329
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=37.15 E-value=32 Score=24.45 Aligned_cols=28 Identities=21% Similarity=0.415 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 9 NKIERAHQLYRDGRYEEALGFYTEALSV 36 (281)
Q Consensus 9 ~l~~~G~~~~~~gdy~eAl~~y~~aL~~ 36 (281)
.....|..+-..|+|+.|+.+|+.++..
T Consensus 14 e~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 14 ENVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 3456777788888888888888888776
No 330
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=36.69 E-value=48 Score=24.41 Aligned_cols=27 Identities=11% Similarity=0.215 Sum_probs=13.6
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 023491 84 RAQTLVTLKEYNSALFDVNRLIELNPS 110 (281)
Q Consensus 84 lg~a~~~~g~~~eAl~~~ekAL~ldP~ 110 (281)
+|-.+...|.++.|+.+|-+|+..-|.
T Consensus 26 lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 26 LGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 344455555555555555555554443
No 331
>2qx5_A Nucleoporin NIC96; mRNA transport, nuclear pore complex, nucleus, protein transport, translocation, transport, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2rfo_A
Probab=35.80 E-value=1.8e+02 Score=28.76 Aligned_cols=97 Identities=13% Similarity=0.091 Sum_probs=50.6
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcC--C---------HHHHHHHHHHHHHhcCCC--
Q 023491 11 IERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLH--D---------FKKAAEECTSVLELDYNH-- 77 (281)
Q Consensus 11 ~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg--~---------y~~Ai~~~~~al~i~p~~-- 77 (281)
...|..+-..|++..|+.+|.-|=.. +..-..+...++.+..... + ...-+......++....+
T Consensus 447 ~~aA~~ae~~G~~~dAi~LY~La~~~---d~vl~lln~~Ls~~l~~~~~~~~~~~~~~~~~~~l~~la~~i~~~y~~~~~ 523 (661)
T 2qx5_A 447 EQAARRADEDGRIYDSILLYQLAEEY---DIVITLVNSLLSDTLSASDLDQPLVGPDDNSETNPVLLARRMASIYFDNAG 523 (661)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHTTCH---HHHHHHHHHHHHHHHHHSCTTSCSSCSSCCTTTCHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHhcCH---HHHHHHHHHHHHHHhcccccccccccccccccccHHHHHHHHHHHHhcCch
Confidence 35566778889999999887765433 1111112222333333321 0 001111222222222122
Q ss_pred ------------HHHHHHHHHHH--HHcCCHHHHHHHHHHHHHhCCCC
Q 023491 78 ------------TGALMLRAQTL--VTLKEYNSALFDVNRLIELNPSS 111 (281)
Q Consensus 78 ------------~~a~~~lg~a~--~~~g~~~eAl~~~ekAL~ldP~~ 111 (281)
...+..+..++ +..|+|..|+..+++ +.+-|-+
T Consensus 524 ~~~~~~~~~~~t~~lLl~l~~f~~~~~~g~~~~AL~~i~~-L~llPl~ 570 (661)
T 2qx5_A 524 ISRQIHVKNKEICMLLLNISSIRELYFNKQWQETLSQMEL-LDLLPFS 570 (661)
T ss_dssp HHTTSCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH-TSCSCC-
T ss_pred hhhhccHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHh-CCCCCCC
Confidence 23455555555 889999999999987 5566755
No 332
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=34.94 E-value=50 Score=30.82 Aligned_cols=14 Identities=14% Similarity=0.069 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHHHc
Q 023491 44 IALHSNRAACYLKL 57 (281)
Q Consensus 44 ~~a~~nra~~~~kl 57 (281)
..+++.||.+|+.+
T Consensus 123 gEa~flRA~~yf~L 136 (477)
T 3mcx_A 123 SEALVMRGLSLFNL 136 (477)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 56666677666653
No 333
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=33.45 E-value=85 Score=29.58 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=29.0
Q ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 41 QQKIALHSNRAACYLKLHDFKKAAEECTSVLEL 73 (281)
Q Consensus 41 p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i 73 (281)
.....++..+|.+|+..++|.+|+..+..+|..
T Consensus 179 ~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 179 ATKGAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455778889999999999999999999999863
No 334
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=33.31 E-value=37 Score=24.08 Aligned_cols=26 Identities=23% Similarity=0.254 Sum_probs=18.2
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023491 47 HSNRAACYLKLHDFKKAAEECTSVLE 72 (281)
Q Consensus 47 ~~nra~~~~klg~y~~Ai~~~~~al~ 72 (281)
...+|.=|..+|+|+.|+.+|..++.
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHH
Confidence 45566667777777777777777654
No 335
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=32.77 E-value=59 Score=24.65 Aligned_cols=14 Identities=7% Similarity=0.159 Sum_probs=6.8
Q ss_pred cCCHHHHHHHHHHH
Q 023491 57 LHDFKKAAEECTSV 70 (281)
Q Consensus 57 lg~y~~Ai~~~~~a 70 (281)
.|+|.+|+..|..+
T Consensus 31 ag~y~eAl~lY~~A 44 (117)
T 2cpt_A 31 AGNYEEALQLYQHA 44 (117)
T ss_dssp HTCHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHH
Confidence 45555555544444
No 336
>3ckc_A SUSD; TPR repeat, carbohydrate binding, starch binding, sugar BIND protein; HET: MES; 1.50A {Bacteroides thetaiotaomicron} SCOP: a.118.8.6 PDB: 3ck8_A* 3ck9_A* 3ckb_A* 3ck7_A*
Probab=32.21 E-value=95 Score=28.96 Aligned_cols=62 Identities=19% Similarity=0.249 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHcCC------------------------HHHHHHHHHHHHHhcCCC----------HHHHHHHHHHHH
Q 023491 44 IALHSNRAACYLKLHD------------------------FKKAAEECTSVLELDYNH----------TGALMLRAQTLV 89 (281)
Q Consensus 44 ~~a~~nra~~~~klg~------------------------y~~Ai~~~~~al~i~p~~----------~~a~~~lg~a~~ 89 (281)
..+++.||.+|+.+=+ |+..+++|..|+..-|.. .-|+..+|.+|+
T Consensus 129 gEA~flRA~~Yf~Lv~~fG~VPl~~~~~~~~~~R~s~~evy~~I~~DL~~A~~~Lp~~~~~~~gr~tk~aA~allArvyL 208 (527)
T 3ckc_A 129 AEIRFLRALHYWYFLDLFGKAPFKEHFSNDLPVEKKGTELYTYIQNELNEIEADMYEPRQAPFGRADKAANWLLRARLYL 208 (527)
T ss_dssp HHHHHHHHHHHHHHHHHHSEEEECSSCSSSCCEEEEHHHHHHHHHHHHHHHGGGSCCTTCSCTTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCccCCccccCCCcCCHHHHHHHHHHHHHHHHHhCccCCCCCCCcHHHHHHHHHHHHHHH
Q ss_pred Hc------CCHHHHHHHHHHHH
Q 023491 90 TL------KEYNSALFDVNRLI 105 (281)
Q Consensus 90 ~~------g~~~eAl~~~ekAL 105 (281)
.+ ++|++|+...+.++
T Consensus 209 ~~~~~~~~~~~~~A~~~a~~vi 230 (527)
T 3ckc_A 209 NAGVYTGQTDYAKAEEYASKVI 230 (527)
T ss_dssp THHHHHSSCCHHHHHHHHHHHH
T ss_pred hhhhccCchhHHHHHHHHHHHH
No 337
>3qtm_A Uncharacterized protein C4B3.07; tetratricopeptide repeat, enhancer of translation terminatio translation; HET: CME; 2.15A {Schizosaccharomyces pombe} PDB: 3qtn_B
Probab=31.85 E-value=2.7e+02 Score=24.65 Aligned_cols=83 Identities=11% Similarity=0.146 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhhh-----cC---cccHHHHHHHHHHH-----------HHcCC-------HHH
Q 023491 9 NKIERAHQLYRDGRYEEALGFYTEALSVAK-----IK---QQKIALHSNRAACY-----------LKLHD-------FKK 62 (281)
Q Consensus 9 ~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~-----~~---p~~~~a~~nra~~~-----------~klg~-------y~~ 62 (281)
-++......+..|+.+..+.++.-.|.-+. .+ .....+|.-.|.++ ++.++ |+.
T Consensus 24 gly~msre~le~g~i~~sv~LLNGIIHECDRLLR~~e~~~~Lpd~FhAIYAlALl~lSELa~~a~Fk~ede~~V~eFFDa 103 (346)
T 3qtm_A 24 GLYEMSREKLENDDIDASVSLVFGTIHEADRILRNTEDISTLPKDFHAAYSSALLAVSELFEIAQKRLKETNTEESYIDA 103 (346)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHHHHHHHTHHHHGGGSCTTCCHHHHHHH
T ss_pred hHHHHHHHHhhccCchhhhHHHcChHHHHHHHHHccCCCCCCCHHHHHHHHHHHHhHHHhhHHhhccCchhhhHHHHHHH
Confidence 467888889999999999999887776543 11 13344444444444 23222 667
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHc
Q 023491 63 AAEECTSVLELDYNHTGALMLRAQTLVTL 91 (281)
Q Consensus 63 Ai~~~~~al~i~p~~~~a~~~lg~a~~~~ 91 (281)
|++-++-.++..|++....+-++.++++.
T Consensus 104 ALERielGLe~~p~s~~L~la~SKILlqr 132 (346)
T 3qtm_A 104 AIERAQLGLDAPGNESRLFLALARAYLEK 132 (346)
T ss_dssp HHHHHHHGGGSSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhhCCCChhHHHHHHHHHHHH
Confidence 77777778888898888888888877654
No 338
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=30.55 E-value=1.1e+02 Score=28.51 Aligned_cols=31 Identities=13% Similarity=0.068 Sum_probs=28.0
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 43 KIALHSNRAACYLKLHDFKKAAEECTSVLEL 73 (281)
Q Consensus 43 ~~~a~~nra~~~~klg~y~~Ai~~~~~al~i 73 (281)
...++..+|.+|+.+|+|.+|+..+..+|..
T Consensus 196 k~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 196 KLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 4678888999999999999999999999965
No 339
>3jys_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=30.13 E-value=77 Score=29.89 Aligned_cols=62 Identities=23% Similarity=0.199 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHcCC-------------------------HHHHHHHHHHHHHhcCCCHH---------HHHHHHHHHH
Q 023491 44 IALHSNRAACYLKLHD-------------------------FKKAAEECTSVLELDYNHTG---------ALMLRAQTLV 89 (281)
Q Consensus 44 ~~a~~nra~~~~klg~-------------------------y~~Ai~~~~~al~i~p~~~~---------a~~~lg~a~~ 89 (281)
+.+++.||.+|+.+=+ |+.-+.++..|+..-|.... |+..+|.+|+
T Consensus 120 aEa~flRA~~Yf~L~~~~G~VP~~~~~~~~~~~~r~~~~evy~~I~~DL~~A~~~Lp~~~~~~gr~tk~aA~allarvyL 199 (499)
T 3jys_A 120 AQARFNRAFAYYVLMDMFALPPFITEKNYSIEPAPLSREDLFNWIEAELNEIKPNLPSPRSEYGVADQAVASALLARMYL 199 (499)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCBCCCTTSCCSSCCBCCHHHHHHHHHHHHHHHGGGSCCTTSSTTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCceecccCCCCCCCcCCHHHHHHHHHHHHHHHHHhCCCCCCCCCCcCHHHHHHHHHHHHH
Q ss_pred ------HcCCHHHHHHHHHHHH
Q 023491 90 ------TLKEYNSALFDVNRLI 105 (281)
Q Consensus 90 ------~~g~~~eAl~~~ekAL 105 (281)
..++|++|+...++++
T Consensus 200 ~~~~y~~~~~~~~A~~~a~~vi 221 (499)
T 3jys_A 200 NAEIYTGKARYTECINACNEVI 221 (499)
T ss_dssp THHHHHSSCCHHHHHHHHHHHH
T ss_pred hhhhccChhHHHHHHHHHHHHH
No 340
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=29.80 E-value=3.6e+02 Score=25.40 Aligned_cols=46 Identities=15% Similarity=0.229 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHhhh--cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 023491 25 EALGFYTEALSVAK--IKQQKIALHSNRAACYLKLHDFKKAAEECTSV 70 (281)
Q Consensus 25 eAl~~y~~aL~~~~--~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~a 70 (281)
.++.+|.+||..+. -.....-.|..+|-++++.++|.+|+..+..+
T Consensus 282 ~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~a 329 (489)
T 4gq4_A 282 DPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADT 329 (489)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHHHHhhhh
Confidence 47888999988754 23344566777899999999999999999887
No 341
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=29.61 E-value=64 Score=30.23 Aligned_cols=48 Identities=15% Similarity=0.054 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHhhh-----cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023491 25 EALGFYTEALSVAK-----IKQQKIALHSNRAACYLKLHDFKKAAEECTSVLE 72 (281)
Q Consensus 25 eAl~~y~~aL~~~~-----~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~ 72 (281)
..+..+..|+...+ .......++..+|.+|+.+++|.+|+..+..+|.
T Consensus 156 ~I~~DL~~A~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 156 QAKEDLKTAASLLPITNKIGKPTQGAAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHHHHHHHHHHSCSSCSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred HHHHHHHHHHHhCCCCCCCCcccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 33444455554433 2345567888899999999999999999999874
No 342
>4fm3_A Uncharacterized hypothetical protein; PF14346 family protein, DUF4398, structural genomics, joint for structural genomics, JCSG; HET: PG4; 2.47A {Pseudomonas aeruginosa}
Probab=29.57 E-value=1.7e+02 Score=21.58 Aligned_cols=28 Identities=18% Similarity=0.093 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023491 8 ANKIERAHQLYRDGRYEEALGFYTEALS 35 (281)
Q Consensus 8 ~~l~~~G~~~~~~gdy~eAl~~y~~aL~ 35 (281)
...+..+...+..++|..|-.+..++..
T Consensus 35 ~dKl~~A~~Am~~~~y~~Ar~lAEqAe~ 62 (98)
T 4fm3_A 35 QDKYAAAQIAMTAESYKKARLLAEQAEL 62 (98)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 3445555666666666666666555544
No 343
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=29.49 E-value=1e+02 Score=28.71 Aligned_cols=29 Identities=10% Similarity=-0.030 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023491 78 TGALMLRAQTLVTLKEYNSALFDVNRLIE 106 (281)
Q Consensus 78 ~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ 106 (281)
.-++..+|.+|+.+++|++|+.....++.
T Consensus 191 ~aA~aLlARvyL~~~~~~~A~~~a~~vi~ 219 (460)
T 3snx_A 191 DVVNGLMARAYLLTGQWGEAAKAAEAARK 219 (460)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 34555566666666666666666665554
No 344
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=29.10 E-value=1.5e+02 Score=25.10 Aligned_cols=50 Identities=6% Similarity=-0.089 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHH--hcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 023491 61 KKAAEECTSVLE--LDYNHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPS 110 (281)
Q Consensus 61 ~~Ai~~~~~al~--i~p~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~ 110 (281)
..+...|..+.. |....+..|-..|..+...|+|.+|...|+..++..-.
T Consensus 131 ~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~ 182 (223)
T 4aez_C 131 DEPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKAK 182 (223)
T ss_dssp SCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCB
T ss_pred CCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 355566666553 44566777888899999999999999999999997643
No 345
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=28.87 E-value=1.2e+02 Score=28.21 Aligned_cols=26 Identities=12% Similarity=-0.124 Sum_probs=17.0
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 11 IERAHQLYRDGRYEEALGFYTEALSV 36 (281)
Q Consensus 11 ~~~G~~~~~~gdy~eAl~~y~~aL~~ 36 (281)
..++..+...++|.+|.-++.....+
T Consensus 39 ~~L~~~h~~~~ny~EAa~~l~lhA~l 64 (436)
T 2yin_A 39 YKLRDLHLDCDNYTEAAYTLLLHTWL 64 (436)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHCcCHHHHHHHHHHHHHH
Confidence 35677777778888777776444333
No 346
>2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A
Probab=28.86 E-value=4.1e+02 Score=26.13 Aligned_cols=27 Identities=7% Similarity=-0.020 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023491 80 ALMLRAQTLVTLKEYNSALFDVNRLIE 106 (281)
Q Consensus 80 a~~~lg~a~~~~g~~~eAl~~~ekAL~ 106 (281)
++|..|..+...+++.+|+..|+.|..
T Consensus 262 A~y~~a~~~~e~~k~GeaIa~L~~A~~ 288 (704)
T 2xs1_A 262 AEYHQSILAKQQYYFGEEIARLQHAAE 288 (704)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHhHHHHHHHHHHHHHH
Confidence 566677777778899999999987764
No 347
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=32.39 E-value=14 Score=36.75 Aligned_cols=45 Identities=16% Similarity=0.124 Sum_probs=26.4
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCH
Q 023491 50 RAACYLKLHDFKKAAEECTSVLELDYNHTGALMLRAQTLVTLKEY 94 (281)
Q Consensus 50 ra~~~~klg~y~~Ai~~~~~al~i~p~~~~a~~~lg~a~~~~g~~ 94 (281)
+|...+..|+|.-|++.+..++..+|++..+...++.+|.++|.-
T Consensus 467 ~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~ 511 (668)
T 2yhe_A 467 QMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQ 511 (668)
Confidence 445555556666666666666666666666666666666655543
No 348
>3ihv_A SUSD homolog; NP_813570.1, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=26.00 E-value=3.2e+02 Score=25.50 Aligned_cols=104 Identities=13% Similarity=0.098 Sum_probs=0.0
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH------HHhhhcCcccHHHHHHHHHHHHHcCC-----------------
Q 023491 3 SPAAPANKIERAHQLYRDGRYEEALGFYTEA------LSVAKIKQQKIALHSNRAACYLKLHD----------------- 59 (281)
Q Consensus 3 ~P~~a~~l~~~G~~~~~~gdy~eAl~~y~~a------L~~~~~~p~~~~a~~nra~~~~klg~----------------- 59 (281)
++.+......-...|..-...-..|...... +...........+++.||.+|+.+=+
T Consensus 71 ~~~~~~~~~~W~~~Y~~I~~aN~~i~~~~~~~~~~~~~~~~~~~~~~aEa~flRA~~Yf~L~~~~G~VPl~~~~~~~~~~ 150 (535)
T 3ihv_A 71 PTTQSEVQQTWAALYTGIYRANDFLERISNKIGSYTTTDKKLATLYIAEARALRGMFYFELVRRFGNVVLMTSTQMSNQN 150 (535)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCSHHHHTSC
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeCCcCCCccc
Q ss_pred ------------HHHHHHHHHHHHHh---------------cCCCHHHHHHHHHHHHHc--------CCHHHHHHHHHHH
Q 023491 60 ------------FKKAAEECTSVLEL---------------DYNHTGALMLRAQTLVTL--------KEYNSALFDVNRL 104 (281)
Q Consensus 60 ------------y~~Ai~~~~~al~i---------------~p~~~~a~~~lg~a~~~~--------g~~~eAl~~~ekA 104 (281)
|+.-+.+|..|+.. .....-|+..+|.+|+.+ ++|++|+...+.+
T Consensus 151 ~~~~~r~~~~ev~~~I~~DL~~A~~~Lp~~~~~~~~g~~~~r~tk~aA~allarvyL~~a~~~~~~~~~~~~A~~~a~~v 230 (535)
T 3ihv_A 151 PATYVQSAPEKVYEYIEDDLLYACDILPYATDDQYRESNDYRFSKGAALGLLTKVYATWAGYPVKDESKWEAAAKTARIL 230 (535)
T ss_dssp GGGCCCCCHHHHHHHHHHHHHHHHHHCCCTTTCCSSSCCTTSCCHHHHHHHHHHHHHHHHSTTTCCTTHHHHHHHHHHHH
T ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhCCcccccccccccccCccHHHHHHHHHHHHHHccCCcccCHHHHHHHHHHHHHH
Q ss_pred HH
Q 023491 105 IE 106 (281)
Q Consensus 105 L~ 106 (281)
+.
T Consensus 231 i~ 232 (535)
T 3ihv_A 231 VE 232 (535)
T ss_dssp HH
T ss_pred Hh
No 349
>2pm7_A Protein WEB1, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm6_A 3mzl_B
Probab=25.36 E-value=3.9e+02 Score=24.39 Aligned_cols=46 Identities=13% Similarity=0.066 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHhhcC
Q 023491 79 GALMLRAQTLVTLKEYNSALFDVNRLIELNP-SSEVYQNLQARLKTQLSLA 128 (281)
Q Consensus 79 ~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP-~~~~a~~~l~~l~~~l~~~ 128 (281)
..+...|.++...|.+..|++++.. -| +++.+..+..+|+......
T Consensus 337 ~~~~eYA~lLA~qG~l~~A~~yL~~----lp~~~~~~~~lr~Rl~~a~~~~ 383 (399)
T 2pm7_A 337 AKFLEFINLTTSTGNFELATEFLNS----LPSDNEEVKTEKARVLIASGKS 383 (399)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHH----SCTTCHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHh----CCCCChhHHHHHHHHHHhcCCC
Confidence 3566779999999999999988763 34 5577888888888877543
No 350
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=24.87 E-value=1.2e+02 Score=28.14 Aligned_cols=13 Identities=38% Similarity=0.488 Sum_probs=6.3
Q ss_pred HHHHHHHHHHHHH
Q 023491 44 IALHSNRAACYLK 56 (281)
Q Consensus 44 ~~a~~nra~~~~k 56 (281)
..+++.||.+|+.
T Consensus 107 gEA~flRA~~yf~ 119 (460)
T 3snx_A 107 GQALALRAFCYLH 119 (460)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4444455555543
No 351
>2ynq_A ESSB; membrane protein, secretion, type V, secretion system; 2.40A {Geobacillus thermodenitrificans}
Probab=24.75 E-value=2.7e+02 Score=22.35 Aligned_cols=110 Identities=8% Similarity=0.131 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHhcCCCHHHHHHHHHH
Q 023491 9 NKIERAHQLYRDGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKK-AAEECTSVLELDYNHTGALMLRAQT 87 (281)
Q Consensus 9 ~l~~~G~~~~~~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~-Ai~~~~~al~i~p~~~~a~~~lg~a 87 (281)
..+..++.+|-..+|...+..+...- .........|.+|..|.+...+.. ....+...|.+. ..--+.+=-+
T Consensus 10 ~a~i~a~~afl~~dYs~VI~~L~~~~----~~~Lp~~~kY~LA~SYI~~e~Ls~eQKenIln~itlk---Sde~yL~YWI 82 (161)
T 2ynq_A 10 EAYIQSTELFLQNKYSDVITTLEDYA----PEDMPYVIQYELASSYVMTESLTEEQRQTVSNNITLK---TDEQYMLYWI 82 (161)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHTTSC----GGGSCHHHHHHHHHHHHHTSSSCHHHHHHHHHTCCTT---SCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhcCC----hhhCChhHHHHHHHHHHHccCCCHHHHHHHHhhCCcc---CCHHHHHHHH
Confidence 34567899999999999998766531 145567788999999998776652 222222222222 2223344456
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCC
Q 023491 88 LVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLSLAP 129 (281)
Q Consensus 88 ~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~~~~ 129 (281)
+..+|++++|+..- ..++ ++.-+...+.+....++..+
T Consensus 83 yiGRg~~~eAlDiA---~~L~-D~qLilyAl~K~~~~vk~d~ 120 (161)
T 2ynq_A 83 YIGRSQSEEALELA---RTIE-DRDLIVYALLKYREQIKGDT 120 (161)
T ss_dssp HHHHTCHHHHHHHH---HHHT-CHHHHHHHHHHHHHHHHTCS
T ss_pred HHcCCchHHHHHHH---HhcC-cHHHHHHHHHHHHHHHhcCC
Confidence 77789999998764 4554 33444444444444444443
No 352
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=29.50 E-value=17 Score=36.17 Aligned_cols=57 Identities=19% Similarity=0.195 Sum_probs=47.9
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCCCC
Q 023491 76 NHTGALMLRAQTLVTLKEYNSALFDVNRLIELNPSSEVYQNLQARLKTQLSLAPIPE 132 (281)
Q Consensus 76 ~~~~a~~~lg~a~~~~g~~~eAl~~~ekAL~ldP~~~~a~~~l~~l~~~l~~~~~~~ 132 (281)
.-....+.+|...+..|+|+.|++.+..++..+|+|..++.+++.+.+++..+....
T Consensus 459 Gg~~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~~~ 515 (668)
T 2yhe_A 459 GGADAVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTENA 515 (668)
Confidence 345667788888889999999999999999999999999999999988887665443
No 353
>3f1j_A Matrix protein, GP18, P16; viral matrix protein, RNA binding, membrane binding, viruses, ssRNA negative-strand viruses, mononegavirales; HET: C5P; 2.65A {Borna disease virus}
Probab=23.69 E-value=25 Score=26.61 Aligned_cols=12 Identities=33% Similarity=0.899 Sum_probs=9.9
Q ss_pred CcceeeecccCC
Q 023491 270 PQYRFRVRTVGV 281 (281)
Q Consensus 270 ~~~~~~~~~~~~ 281 (281)
--|.||+|.|||
T Consensus 119 nvfsyrlrnigv 130 (142)
T 3f1j_A 119 NVFSYRLRNIGV 130 (142)
T ss_dssp CCCEEEEEEECC
T ss_pred hHhhhhhhcccc
Confidence 567889999987
No 354
>2byk_A Chrac-16; nucleosome sliding, histone fold, DNA-binding protein; 2.4A {Drosophila melanogaster} SCOP: a.22.1.3 PDB: 2bym_A
Probab=22.98 E-value=18 Score=28.70 Aligned_cols=7 Identities=0% Similarity=0.325 Sum_probs=1.9
Q ss_pred HHHHhcC
Q 023491 69 SVLELDY 75 (281)
Q Consensus 69 ~al~i~p 75 (281)
++++.+|
T Consensus 27 rIMK~dp 33 (140)
T 2byk_A 27 TIMKSSM 33 (140)
T ss_dssp --CCSSS
T ss_pred HHHhcCc
Confidence 3333333
No 355
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=22.76 E-value=1.7e+02 Score=27.72 Aligned_cols=33 Identities=21% Similarity=0.214 Sum_probs=28.7
Q ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 41 QQKIALHSNRAACYLKLHDFKKAAEECTSVLEL 73 (281)
Q Consensus 41 p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i 73 (281)
.....++..+|.+|+..++|.+|+..+..+|..
T Consensus 195 ~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 227 (528)
T 3i4g_A 195 ACKQAALAFLGRTCMLQKDWKSGAKAFHDIMEL 227 (528)
T ss_dssp CCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 345678888999999999999999999999864
No 356
>3iv0_A SUSD homolog; NP_809186.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482}
Probab=22.23 E-value=1.1e+02 Score=28.43 Aligned_cols=63 Identities=13% Similarity=0.064 Sum_probs=42.9
Q ss_pred cHHHHHHHHHHHHHcCC-------------------------HHHHHHHHHHHHHh------cCC-------------CH
Q 023491 43 KIALHSNRAACYLKLHD-------------------------FKKAAEECTSVLEL------DYN-------------HT 78 (281)
Q Consensus 43 ~~~a~~nra~~~~klg~-------------------------y~~Ai~~~~~al~i------~p~-------------~~ 78 (281)
...+++.||.+|+.+=+ |+..+.++..|+.. -|. ..
T Consensus 124 ~gEa~flRA~~yf~L~~~~G~VP~~~~~~~~~~~~r~~~~evy~~I~~DL~~A~~~~~~~~~Lp~~~~~~~~~~gR~tk~ 203 (481)
T 3iv0_A 124 KAEAIFMRSLSYFFIVRAFGDVPYYTNAYNEAPLPRTNMVIVLQNCLADLQPLLDDDPGAEVLPWSYSSYSSKGIRASRG 203 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSEECCCCC----CCCEECHHHHHHHHHHHHHHHHHTCTTSCSSCSCCSSTTTTTTSCCHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCeeEEcccccccCCCCCCHHHHHHHHHHHHHHHHhcccccccCCCccccCcccCCccCHH
Confidence 46777888888877422 77788889998886 332 11
Q ss_pred HHHHHHHHHHHHcCC---------HHHHHHHHHHHH
Q 023491 79 GALMLRAQTLVTLKE---------YNSALFDVNRLI 105 (281)
Q Consensus 79 ~a~~~lg~a~~~~g~---------~~eAl~~~ekAL 105 (281)
.|+..+|.+|+-++. |++|+.....++
T Consensus 204 aA~allarvyL~~~~~~~~~~~~~~~~a~~~a~~vi 239 (481)
T 3iv0_A 204 SVIALMMHINLWLVQFDAQNKEQYYRNVVSLGEELE 239 (481)
T ss_dssp HHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCccccHHHHHHHHHHHHHHH
Confidence 467788888876654 666666666655
No 357
>2jpu_A ORF C02003 protein; solution structure, SSR10, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Sulfolobus solfataricus} PDB: 2q00_A
Probab=20.68 E-value=1.3e+02 Score=23.35 Aligned_cols=31 Identities=19% Similarity=0.181 Sum_probs=27.7
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 6 APANKIERAHQLYRDGRYEEALGFYTEALSV 36 (281)
Q Consensus 6 ~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~ 36 (281)
.+..++..|..++..||+.+|.+.|-+|+..
T Consensus 6 lAe~yL~EA~ell~kGD~vQAsEK~ykAaee 36 (129)
T 2jpu_A 6 SAEVYYEEAEEFLSKGDLVQACEKYYKAAEE 36 (129)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 5778899999999999999999998888774
No 358
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=20.32 E-value=1.6e+02 Score=25.73 Aligned_cols=50 Identities=18% Similarity=0.152 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHhh-------hcCcccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHh
Q 023491 24 EEALGFYTEALSVA-------KIKQQKIALHSNRAACYL-KLHDFKKAAEECTSVLEL 73 (281)
Q Consensus 24 ~eAl~~y~~aL~~~-------~~~p~~~~a~~nra~~~~-klg~y~~Ai~~~~~al~i 73 (281)
+.|...|+.|+.++ |.+|....+.+|.+..|+ -+++.++|......|+.-
T Consensus 169 e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 169 KQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 45667777776543 356666667777777776 477888888887777654
No 359
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=20.30 E-value=1.1e+02 Score=22.77 Aligned_cols=31 Identities=23% Similarity=0.230 Sum_probs=23.1
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 023491 6 APANKIERAHQLYRDGRYEEALGFYTEALSV 36 (281)
Q Consensus 6 ~a~~l~~~G~~~~~~gdy~eAl~~y~~aL~~ 36 (281)
++..+...|..+.+.|+|++|-.++.++-..
T Consensus 19 ~ArS~~~eAl~~Ak~g~fe~A~~~l~eA~~~ 49 (105)
T 2e2a_A 19 DARSKLLEALKAAENGDFAKADSLVVEAGSC 49 (105)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 4566677777888888888888887777554
No 360
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.16 E-value=1.4e+02 Score=22.75 Aligned_cols=46 Identities=11% Similarity=0.128 Sum_probs=27.0
Q ss_pred cCCHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCC
Q 023491 20 DGRYEEALGFYTEALSVAKIKQQKIALHSNRAACYLKLHDFKKAAEECTSVLELDYN 76 (281)
Q Consensus 20 ~gdy~eAl~~y~~aL~~~~~~p~~~~a~~nra~~~~klg~y~~Ai~~~~~al~i~p~ 76 (281)
...|.+|..+..++|.+ +. .|.-..-+.-|.++|..+.++|.+...
T Consensus 16 k~~h~~AF~~Is~AL~~---DE--------~g~k~~Al~lYk~GI~eLe~Gl~I~~~ 61 (116)
T 2dl1_A 16 REAYKKAFLFVNKGLNT---DE--------LGQKEEAKNYYKQGIGHLLRGISISSK 61 (116)
T ss_dssp HHHHHHHHHHHHHHHHH---HH--------HTCHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHHHHHHhhh---hh--------cCCHHHHHHHHHHHHHHHHHhcccccc
Confidence 34577788888888877 32 122222233355666677777777654
Done!