Query 023494
Match_columns 281
No_of_seqs 174 out of 1268
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 07:47:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023494.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023494hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3inp_A D-ribulose-phosphate 3- 100.0 6.7E-65 2.3E-69 458.3 22.7 217 57-275 27-244 (246)
2 3ctl_A D-allulose-6-phosphate 100.0 1.8E-62 6.1E-67 439.2 24.0 215 59-275 2-218 (231)
3 3ovp_A Ribulose-phosphate 3-ep 100.0 3.9E-61 1.3E-65 429.7 23.3 213 57-275 4-218 (228)
4 1tqx_A D-ribulose-5-phosphate 100.0 1.6E-60 5.6E-65 425.4 21.7 212 57-275 5-222 (227)
5 3cu2_A Ribulose-5-phosphate 3- 100.0 3.5E-58 1.2E-62 412.7 21.5 211 59-274 15-236 (237)
6 1tqj_A Ribulose-phosphate 3-ep 100.0 9.5E-56 3.3E-60 395.0 24.3 218 58-277 5-224 (230)
7 1h1y_A D-ribulose-5-phosphate 100.0 1.9E-49 6.5E-54 352.8 23.6 213 57-275 6-222 (228)
8 1rpx_A Protein (ribulose-phosp 100.0 7E-45 2.4E-49 322.6 26.0 225 50-276 3-229 (230)
9 2fli_A Ribulose-phosphate 3-ep 100.0 2E-43 7E-48 310.0 25.2 217 57-275 3-219 (220)
10 2czd_A Orotidine 5'-phosphate 100.0 1.5E-37 5.2E-42 272.5 4.7 199 62-275 1-206 (208)
11 3jr2_A Hexulose-6-phosphate sy 100.0 6E-35 2E-39 257.7 6.2 201 62-275 8-214 (218)
12 1q6o_A Humps, 3-keto-L-gulonat 100.0 5.7E-34 2E-38 250.9 9.8 199 61-275 4-212 (216)
13 1eix_A Orotidine 5'-monophosph 100.0 7.2E-34 2.4E-38 255.7 3.2 203 60-276 14-243 (245)
14 3f4w_A Putative hexulose 6 pho 100.0 1.4E-32 4.7E-37 239.8 11.3 200 63-275 3-208 (211)
15 3ajx_A 3-hexulose-6-phosphate 100.0 1.3E-31 4.5E-36 233.0 14.3 198 62-274 2-206 (207)
16 2yyu_A Orotidine 5'-phosphate 100.0 6.6E-33 2.3E-37 249.4 5.6 201 61-275 5-236 (246)
17 1geq_A Tryptophan synthase alp 100.0 3.1E-31 1E-35 236.9 14.2 205 56-272 3-239 (248)
18 1qop_A Tryptophan synthase alp 100.0 2.8E-30 9.6E-35 234.9 14.3 194 57-260 16-240 (268)
19 1dbt_A Orotidine 5'-phosphate 100.0 4.4E-32 1.5E-36 242.9 2.2 200 62-275 5-235 (239)
20 3exr_A RMPD (hexulose-6-phosph 100.0 2E-30 6.9E-35 230.1 11.3 204 61-275 6-217 (221)
21 1rd5_A Tryptophan synthase alp 99.9 1.9E-27 6.4E-32 214.9 15.8 206 57-272 17-252 (262)
22 3vnd_A TSA, tryptophan synthas 99.9 4.1E-27 1.4E-31 214.3 14.7 209 57-274 17-260 (267)
23 3m47_A Orotidine 5'-phosphate 99.9 2.7E-24 9.4E-29 191.5 6.8 202 62-276 14-224 (228)
24 1vzw_A Phosphoribosyl isomeras 99.9 1.3E-22 4.5E-27 180.5 12.7 187 71-270 33-239 (244)
25 1yad_A Regulatory protein TENI 99.9 3.9E-22 1.3E-26 175.3 13.0 192 58-275 20-213 (221)
26 2y88_A Phosphoribosyl isomeras 99.9 2.1E-21 7.1E-26 172.4 12.2 185 71-268 32-240 (244)
27 1xi3_A Thiamine phosphate pyro 99.8 3.7E-20 1.2E-24 160.8 12.8 192 58-275 18-211 (215)
28 2tps_A Protein (thiamin phosph 99.8 2.9E-20 9.9E-25 163.1 11.4 198 57-275 20-221 (227)
29 1yxy_A Putative N-acetylmannos 99.8 1E-19 3.6E-24 160.9 15.0 180 71-275 37-233 (234)
30 1y0e_A Putative N-acetylmannos 99.8 6.2E-19 2.1E-23 154.5 17.7 182 70-275 23-222 (223)
31 3nav_A Tryptophan synthase alp 99.8 7.7E-19 2.6E-23 160.0 16.3 208 56-273 18-261 (271)
32 2v82_A 2-dehydro-3-deoxy-6-pho 99.8 4.7E-19 1.6E-23 154.5 14.0 187 57-275 6-201 (212)
33 3nl6_A Thiamine biosynthetic b 99.8 4.8E-19 1.6E-23 175.3 13.9 205 58-276 13-231 (540)
34 1h5y_A HISF; histidine biosynt 99.8 3.3E-18 1.1E-22 150.9 16.4 191 70-272 33-246 (253)
35 1thf_D HISF protein; thermophI 99.8 3.2E-18 1.1E-22 152.5 15.5 190 71-272 31-243 (253)
36 2ekc_A AQ_1548, tryptophan syn 99.8 3E-18 1E-22 155.1 13.5 207 57-274 16-256 (262)
37 3o63_A Probable thiamine-phosp 99.7 4E-18 1.4E-22 153.1 11.0 202 59-276 34-241 (243)
38 3ru6_A Orotidine 5'-phosphate 99.7 3.6E-18 1.2E-22 157.5 10.7 202 61-276 25-252 (303)
39 3tha_A Tryptophan synthase alp 99.7 1.6E-16 5.6E-21 143.1 15.0 206 57-275 13-251 (252)
40 1ujp_A Tryptophan synthase alp 99.6 2.5E-15 8.7E-20 136.8 14.9 206 57-275 15-254 (271)
41 3ldv_A Orotidine 5'-phosphate 99.6 5.3E-16 1.8E-20 140.1 8.5 198 62-274 29-254 (255)
42 3tfx_A Orotidine 5'-phosphate 99.6 1.6E-15 5.4E-20 137.3 9.7 199 62-275 6-237 (259)
43 3qja_A IGPS, indole-3-glycerol 99.6 2.2E-14 7.4E-19 130.7 15.0 199 60-275 61-263 (272)
44 3tr2_A Orotidine 5'-phosphate 99.6 4.8E-14 1.6E-18 126.2 16.5 201 61-276 9-238 (239)
45 1vqt_A Orotidine 5'-phosphate 99.6 1.4E-16 4.8E-21 140.3 -0.2 182 67-274 16-212 (213)
46 2yw3_A 4-hydroxy-2-oxoglutarat 99.6 1.4E-13 4.9E-18 120.4 18.7 189 59-278 14-205 (207)
47 2h6r_A Triosephosphate isomera 99.6 5.5E-15 1.9E-19 130.4 9.1 168 95-273 37-218 (219)
48 1wa3_A 2-keto-3-deoxy-6-phosph 99.6 7.5E-14 2.6E-18 120.6 15.1 187 58-275 10-201 (205)
49 4dbe_A Orotidine 5'-phosphate 99.5 1.7E-13 5.9E-18 121.3 14.2 189 62-275 5-208 (222)
50 3iwp_A Copper homeostasis prot 99.5 3.5E-13 1.2E-17 122.9 15.2 167 71-253 48-237 (287)
51 3tsm_A IGPS, indole-3-glycerol 99.5 2.5E-12 8.5E-17 117.1 20.6 196 60-272 68-267 (272)
52 3ve9_A Orotidine-5'-phosphate 99.5 1.8E-13 6.3E-18 120.6 12.5 184 62-275 3-201 (215)
53 2zbt_A Pyridoxal biosynthesis 99.5 4.7E-14 1.6E-18 129.1 7.3 190 73-275 31-259 (297)
54 1vc4_A Indole-3-glycerol phosp 99.4 3E-12 1E-16 115.4 17.2 187 70-271 65-253 (254)
55 1vhc_A Putative KHG/KDPG aldol 99.3 3.9E-11 1.3E-15 106.2 16.6 184 59-272 18-208 (224)
56 1ka9_F Imidazole glycerol phos 99.3 2.4E-11 8.1E-16 107.8 15.3 191 70-272 31-244 (252)
57 1wbh_A KHG/KDPG aldolase; lyas 99.3 1.5E-11 5.2E-16 108.1 13.2 173 59-261 17-191 (214)
58 2gjl_A Hypothetical protein PA 99.3 1.3E-11 4.4E-16 114.4 13.3 145 105-262 57-209 (328)
59 1mxs_A KDPG aldolase; 2-keto-3 99.3 2.6E-11 8.8E-16 107.5 14.6 183 59-272 27-217 (225)
60 3eww_A Ompdecase, orotidine-5' 99.3 1.5E-10 5.1E-15 104.7 18.8 180 62-273 33-249 (260)
61 1xm3_A Thiazole biosynthesis p 99.3 1.2E-10 4E-15 105.4 17.0 188 69-274 22-227 (264)
62 3igs_A N-acetylmannosamine-6-p 99.3 2.3E-10 8E-15 101.6 17.5 181 69-275 35-228 (232)
63 3q58_A N-acetylmannosamine-6-p 99.2 3.3E-10 1.1E-14 100.5 17.9 179 70-275 36-228 (229)
64 1viz_A PCRB protein homolog; s 99.2 3.5E-11 1.2E-15 107.7 9.7 179 64-270 12-224 (240)
65 3bo9_A Putative nitroalkan dio 99.2 2.1E-10 7.2E-15 106.6 14.3 141 105-261 67-212 (326)
66 4adt_A Pyridoxine biosynthetic 99.2 2.4E-11 8.3E-16 111.8 7.8 193 67-275 26-259 (297)
67 3ceu_A Thiamine phosphate pyro 99.2 1.6E-10 5.6E-15 100.7 11.4 163 73-264 16-182 (210)
68 2nv1_A Pyridoxal biosynthesis 99.2 9.2E-11 3.1E-15 107.9 10.2 191 73-274 31-258 (305)
69 3g3d_A UMP synthase, uridine 5 99.1 1.7E-09 6E-14 99.9 17.7 180 62-273 85-301 (312)
70 4e38_A Keto-hydroxyglutarate-a 99.1 1.6E-09 5.4E-14 96.4 16.9 184 59-271 35-224 (232)
71 2f6u_A GGGPS, (S)-3-O-geranylg 99.1 5.2E-11 1.8E-15 106.1 7.1 172 64-259 12-223 (234)
72 2w6r_A Imidazole glycerol phos 99.1 6.3E-10 2.2E-14 99.4 14.1 187 71-268 31-244 (266)
73 1i4n_A Indole-3-glycerol phosp 99.1 5E-09 1.7E-13 94.2 19.1 195 60-273 50-249 (251)
74 3tdn_A FLR symmetric alpha-bet 99.1 1.1E-10 3.8E-15 103.7 7.3 187 71-269 36-244 (247)
75 2z6i_A Trans-2-enoyl-ACP reduc 99.1 7.4E-10 2.5E-14 102.9 12.7 141 105-261 53-198 (332)
76 3w01_A Heptaprenylglyceryl pho 99.1 7.9E-10 2.7E-14 98.4 12.2 174 65-264 16-222 (235)
77 3gdm_A Orotidine 5'-phosphate 99.0 1.1E-08 3.8E-13 92.7 18.2 186 62-273 31-254 (267)
78 3bw2_A 2-nitropropane dioxygen 99.0 2.2E-09 7.6E-14 101.0 13.5 121 129-263 113-246 (369)
79 3vzx_A Heptaprenylglyceryl pho 99.0 9.9E-10 3.4E-14 97.4 9.3 163 74-260 22-214 (228)
80 3khj_A Inosine-5-monophosphate 99.0 7.9E-09 2.7E-13 97.4 14.9 177 71-260 58-242 (361)
81 1qo2_A Molecule: N-((5-phospho 99.0 3.1E-09 1.1E-13 93.9 10.8 184 71-268 31-238 (241)
82 3lab_A Putative KDPG (2-keto-3 98.9 3.5E-08 1.2E-12 86.8 17.0 190 57-275 12-213 (217)
83 1pii_A N-(5'phosphoribosyl)ant 98.8 7.1E-08 2.4E-12 93.4 16.7 194 60-272 57-254 (452)
84 2yzr_A Pyridoxal biosynthesis 98.8 4.8E-09 1.6E-13 97.3 7.3 194 64-275 77-292 (330)
85 2qjg_A Putative aldolase MJ040 98.8 1.2E-07 4E-12 85.1 16.1 179 68-275 43-258 (273)
86 1to3_A Putative aldolase YIHT; 98.8 1.4E-07 4.8E-12 86.9 14.9 189 70-275 48-287 (304)
87 1w8s_A FBP aldolase, fructose- 98.8 7.7E-07 2.6E-11 80.2 19.4 179 68-275 39-252 (263)
88 3o07_A Pyridoxine biosynthesis 98.7 3E-09 1E-13 96.3 2.7 192 67-275 16-250 (291)
89 1ep3_A Dihydroorotate dehydrog 98.7 8.3E-08 2.8E-12 87.4 11.1 161 108-273 90-290 (311)
90 3qw3_A Orotidine-5-phosphate d 98.7 2.9E-07 1E-11 82.8 13.6 191 61-275 14-249 (255)
91 2ffc_A Orotidine 5-monophospha 98.6 2.3E-07 7.7E-12 87.1 12.6 165 98-275 137-345 (353)
92 4a29_A Engineered retro-aldol 98.6 1.4E-06 4.8E-11 78.2 15.6 187 60-264 55-243 (258)
93 3qw4_B UMP synthase; N-termina 98.6 5.2E-07 1.8E-11 87.4 13.1 197 61-275 15-250 (453)
94 1wv2_A Thiazole moeity, thiazo 98.5 7.9E-07 2.7E-11 79.9 11.7 191 68-274 28-236 (265)
95 2fds_A Orotidine-monophosphate 98.5 5.8E-08 2E-12 91.2 3.8 172 98-275 127-335 (352)
96 2agk_A 1-(5-phosphoribosyl)-5- 98.5 3.2E-06 1.1E-10 76.1 14.7 182 72-271 40-257 (260)
97 2e6f_A Dihydroorotate dehydrog 98.5 2.3E-06 7.7E-11 78.3 13.7 146 114-263 92-283 (314)
98 2htm_A Thiazole biosynthesis p 98.4 3.2E-06 1.1E-10 76.1 13.5 188 68-274 21-227 (268)
99 4fo4_A Inosine 5'-monophosphat 98.4 4.6E-06 1.6E-10 78.7 14.7 176 71-260 59-246 (366)
100 1jub_A Dihydroorotate dehydrog 98.4 4E-06 1.4E-10 76.6 13.4 142 115-259 93-276 (311)
101 1nvm_A HOA, 4-hydroxy-2-oxoval 98.3 1.4E-05 4.7E-10 74.6 15.9 192 70-271 30-247 (345)
102 3r2g_A Inosine 5'-monophosphat 98.3 1.8E-06 6.1E-11 81.3 9.7 122 129-260 103-234 (361)
103 4gj1_A 1-(5-phosphoribosyl)-5- 98.3 1.6E-05 5.3E-10 70.8 14.4 193 63-270 27-241 (243)
104 2bdq_A Copper homeostasis prot 98.3 7.4E-06 2.5E-10 72.2 12.0 171 77-265 15-218 (224)
105 4avf_A Inosine-5'-monophosphat 98.3 6.8E-06 2.3E-10 80.2 12.9 181 70-260 166-367 (490)
106 1twd_A Copper homeostasis prot 98.2 2.1E-05 7.2E-10 70.5 13.7 165 71-254 10-198 (256)
107 1hg3_A Triosephosphate isomera 98.2 2.5E-05 8.5E-10 69.0 14.0 157 105-273 49-224 (225)
108 1qpo_A Quinolinate acid phosph 98.2 1.3E-05 4.6E-10 73.0 11.8 94 153-261 180-276 (284)
109 3vk5_A MOEO5; TIM barrel, tran 98.2 1.6E-05 5.4E-10 72.3 12.0 165 75-260 58-262 (286)
110 2p10_A MLL9387 protein; putati 98.2 4E-05 1.4E-09 69.6 14.7 194 76-276 41-280 (286)
111 1o4u_A Type II quinolic acid p 98.2 5.9E-06 2E-10 75.4 9.3 93 154-261 179-275 (285)
112 1w0m_A TIM, triosephosphate is 98.1 2.1E-05 7.2E-10 69.5 12.1 136 131-275 78-223 (226)
113 1f76_A Dihydroorotate dehydrog 98.1 4.7E-05 1.6E-09 70.3 15.0 151 106-259 123-323 (336)
114 1jcn_A Inosine monophosphate d 98.1 4.5E-05 1.5E-09 74.6 15.3 124 128-260 257-393 (514)
115 1jvn_A Glutamine, bifunctional 98.1 3.7E-05 1.3E-09 76.1 14.6 189 73-272 283-545 (555)
116 1nsj_A PRAI, phosphoribosyl an 98.1 9E-05 3.1E-09 64.4 15.4 173 70-264 10-193 (205)
117 1v5x_A PRA isomerase, phosphor 98.1 0.00013 4.5E-09 63.3 16.2 168 74-264 12-187 (203)
118 3glc_A Aldolase LSRF; TIM barr 98.1 3.1E-05 1.1E-09 71.0 12.8 173 70-274 73-277 (295)
119 2b7n_A Probable nicotinate-nuc 98.1 1.2E-05 4E-10 73.0 9.5 93 154-261 168-264 (273)
120 3usb_A Inosine-5'-monophosphat 98.1 0.0001 3.4E-09 72.3 16.8 184 70-259 193-393 (511)
121 4ef8_A Dihydroorotate dehydrog 98.1 4.1E-05 1.4E-09 71.9 13.4 196 61-260 48-312 (354)
122 3b0p_A TRNA-dihydrouridine syn 98.0 3.1E-05 1.1E-09 72.4 11.9 142 114-260 56-231 (350)
123 3cwo_X Beta/alpha-barrel prote 98.0 5.5E-05 1.9E-09 64.4 12.6 185 71-272 13-222 (237)
124 3ffs_A Inosine-5-monophosphate 98.0 9.1E-05 3.1E-09 70.6 15.0 127 128-260 146-281 (400)
125 1p0k_A Isopentenyl-diphosphate 98.0 8.3E-05 2.8E-09 69.1 14.3 142 114-260 115-286 (349)
126 1eep_A Inosine 5'-monophosphat 98.0 4.5E-05 1.5E-09 72.4 12.6 135 117-259 143-290 (404)
127 3n3m_A Orotidine 5'-phosphate 98.0 4.5E-06 1.6E-10 77.9 4.4 179 84-275 117-333 (342)
128 2jbm_A Nicotinate-nucleotide p 98.0 2.1E-05 7.1E-10 72.3 8.6 93 154-261 183-279 (299)
129 3oix_A Putative dihydroorotate 97.9 4.7E-05 1.6E-09 71.2 10.7 198 61-261 49-312 (345)
130 2ftp_A Hydroxymethylglutaryl-C 97.9 0.00022 7.6E-09 65.1 15.0 174 68-253 28-234 (302)
131 1ydn_A Hydroxymethylglutaryl-C 97.9 0.00018 6.2E-09 65.3 14.1 172 71-253 27-230 (295)
132 3zwt_A Dihydroorotate dehydrog 97.9 0.00025 8.4E-09 66.8 14.8 196 61-259 61-333 (367)
133 1z41_A YQJM, probable NADH-dep 97.9 0.00018 6.1E-09 66.8 13.2 128 133-267 152-320 (338)
134 3kts_A Glycerol uptake operon 97.8 0.00012 4.1E-09 63.0 10.9 99 137-259 81-185 (192)
135 1vrd_A Inosine-5'-monophosphat 97.8 0.00014 4.9E-09 70.5 12.6 182 71-258 175-373 (494)
136 1vhn_A Putative flavin oxidore 97.8 0.00016 5.5E-09 66.4 12.0 150 104-264 47-223 (318)
137 1dxe_A 2-dehydro-3-deoxy-galac 97.8 0.00023 8E-09 63.5 12.7 176 72-256 29-239 (256)
138 3hgj_A Chromate reductase; TIM 97.8 0.00039 1.3E-08 64.8 14.6 127 134-267 161-331 (349)
139 1x1o_A Nicotinate-nucleotide p 97.8 9.3E-05 3.2E-09 67.5 9.9 90 154-261 182-275 (286)
140 4aaj_A N-(5'-phosphoribosyl)an 97.8 0.0018 6.2E-08 57.1 17.7 171 70-264 29-214 (228)
141 2cw6_A Hydroxymethylglutaryl-C 97.8 0.00048 1.6E-08 62.7 14.1 168 74-253 31-231 (298)
142 1me8_A Inosine-5'-monophosphat 97.7 0.00014 4.9E-09 71.0 11.1 129 126-258 242-385 (503)
143 3i65_A Dihydroorotate dehydrog 97.7 0.00021 7.1E-09 68.4 11.9 196 61-259 95-379 (415)
144 4fxs_A Inosine-5'-monophosphat 97.7 0.00027 9.3E-09 69.0 12.8 128 128-260 233-369 (496)
145 1gte_A Dihydropyrimidine dehyd 97.7 0.00028 9.5E-09 74.4 13.7 163 107-273 625-837 (1025)
146 3qz6_A HPCH/HPAI aldolase; str 97.7 0.00051 1.8E-08 61.6 12.6 172 74-256 28-238 (261)
147 2qr6_A IMP dehydrogenase/GMP r 97.6 0.00054 1.9E-08 64.6 13.0 148 106-259 147-311 (393)
148 1ydo_A HMG-COA lyase; TIM-barr 97.6 0.00089 3E-08 61.4 13.8 167 71-252 29-231 (307)
149 2uva_G Fatty acid synthase bet 97.6 0.00069 2.4E-08 76.0 15.2 145 105-259 625-800 (2060)
150 3c2e_A Nicotinate-nucleotide p 97.6 8.5E-05 2.9E-09 68.0 6.1 93 154-261 185-284 (294)
151 2vws_A YFAU, 2-keto-3-deoxy su 97.6 0.00085 2.9E-08 60.3 12.5 175 72-256 28-239 (267)
152 2gou_A Oxidoreductase, FMN-bin 97.5 0.00094 3.2E-08 62.7 12.9 124 134-267 170-335 (365)
153 3gr7_A NADPH dehydrogenase; fl 97.5 0.0019 6.6E-08 59.9 14.6 127 134-267 153-320 (340)
154 2v5j_A 2,4-dihydroxyhept-2-ENE 97.5 0.001 3.5E-08 60.6 12.3 173 73-256 50-260 (287)
155 2c6q_A GMP reductase 2; TIM ba 97.5 0.0021 7.1E-08 60.0 14.8 125 130-259 122-257 (351)
156 2r14_A Morphinone reductase; H 97.5 0.00054 1.9E-08 64.6 10.8 126 134-267 175-341 (377)
157 3ble_A Citramalate synthase fr 97.5 0.00061 2.1E-08 63.3 11.0 186 71-272 42-267 (337)
158 3l0g_A Nicotinate-nucleotide p 97.5 0.00042 1.4E-08 63.5 9.5 89 154-260 194-285 (300)
159 2nzl_A Hydroxyacid oxidase 1; 97.5 0.0014 4.7E-08 62.2 13.2 49 208-259 292-341 (392)
160 3l5l_A Xenobiotic reductase A; 97.5 0.00053 1.8E-08 64.2 10.2 127 134-267 167-338 (363)
161 1vyr_A Pentaerythritol tetrani 97.4 0.001 3.5E-08 62.4 11.8 126 134-268 170-337 (364)
162 1ypf_A GMP reductase; GUAC, pu 97.4 0.002 6.7E-08 59.6 13.2 145 105-259 85-244 (336)
163 3sgz_A Hydroxyacid oxidase 2; 97.4 0.0015 5.2E-08 61.1 12.5 135 67-258 132-305 (352)
164 1qap_A Quinolinic acid phospho 97.4 0.00025 8.6E-09 64.9 6.9 90 153-260 194-286 (296)
165 1tv5_A Dhodehase, dihydroorota 97.4 0.0011 3.9E-08 63.8 11.6 195 61-258 93-406 (443)
166 3gnn_A Nicotinate-nucleotide p 97.4 0.00086 2.9E-08 61.4 10.0 90 153-260 195-287 (298)
167 3tqv_A Nicotinate-nucleotide p 97.4 0.00042 1.4E-08 63.2 7.9 89 153-259 184-275 (287)
168 3sr7_A Isopentenyl-diphosphate 97.3 0.001 3.6E-08 62.5 10.7 141 113-258 142-311 (365)
169 1zfj_A Inosine monophosphate d 97.3 0.011 3.9E-07 56.9 18.4 182 70-259 170-370 (491)
170 2nx9_A Oxaloacetate decarboxyl 97.3 0.0032 1.1E-07 61.0 14.2 168 75-252 35-231 (464)
171 2nli_A Lactate oxidase; flavoe 97.3 0.0027 9.3E-08 59.6 13.0 49 208-259 269-318 (368)
172 1gox_A (S)-2-hydroxy-acid oxid 97.3 0.002 7E-08 60.4 12.1 49 208-259 265-314 (370)
173 3m9y_A Triosephosphate isomera 97.3 0.0048 1.6E-07 55.2 13.8 132 131-267 83-250 (254)
174 3zen_D Fatty acid synthase; tr 97.3 0.00021 7.3E-09 82.5 6.1 153 105-260 470-652 (3089)
175 1yya_A Triosephosphate isomera 97.2 0.0041 1.4E-07 55.6 12.7 130 131-268 79-247 (250)
176 3dxi_A Putative aldolase; TIM 97.2 0.0039 1.3E-07 57.6 12.9 189 71-272 25-240 (320)
177 3gka_A N-ethylmaleimide reduct 97.2 0.0029 9.7E-08 59.4 11.9 118 134-266 170-328 (361)
178 1rqb_A Transcarboxylase 5S sub 97.2 0.0064 2.2E-07 59.9 14.8 172 72-251 49-249 (539)
179 1pii_A N-(5'phosphoribosyl)ant 97.2 0.0063 2.2E-07 58.7 14.5 164 76-264 268-440 (452)
180 2btm_A TIM, protein (triosepho 97.2 0.0042 1.5E-07 55.5 12.2 129 131-267 79-246 (252)
181 4ab4_A Xenobiotic reductase B; 97.1 0.003 1E-07 59.3 11.5 118 134-266 162-320 (362)
182 2j27_A Triosephosphate isomera 97.1 0.0096 3.3E-07 53.1 14.1 132 131-268 80-247 (250)
183 1p4c_A L(+)-mandelate dehydrog 97.1 0.0016 5.5E-08 61.4 9.4 45 210-259 267-312 (380)
184 4gj1_A 1-(5-phosphoribosyl)-5- 97.1 0.00036 1.2E-08 61.9 4.5 81 174-262 30-112 (243)
185 3kru_A NADH:flavin oxidoreduct 97.1 0.0047 1.6E-07 57.5 12.3 128 134-268 152-321 (343)
186 1o5x_A TIM, triosephosphate is 97.1 0.025 8.7E-07 50.3 16.4 132 131-268 80-245 (248)
187 1vcf_A Isopentenyl-diphosphate 97.1 0.0057 1.9E-07 56.3 12.5 144 110-258 111-289 (332)
188 3iix_A Biotin synthetase, puta 97.1 0.0036 1.2E-07 57.2 11.1 176 68-252 85-291 (348)
189 3tjx_A Dihydroorotate dehydrog 97.1 0.028 9.6E-07 52.1 17.2 209 62-274 49-328 (354)
190 1kbi_A Cytochrome B2, L-LCR; f 97.1 0.0075 2.6E-07 59.0 13.8 50 209-258 384-436 (511)
191 3gk0_A PNP synthase, pyridoxin 97.0 0.034 1.2E-06 49.9 16.7 194 68-275 51-267 (278)
192 3paj_A Nicotinate-nucleotide p 97.0 0.0011 3.8E-08 61.2 7.1 88 154-259 218-308 (320)
193 1aw2_A Triosephosphate isomera 97.0 0.0076 2.6E-07 54.0 12.2 132 131-269 82-250 (256)
194 4af0_A Inosine-5'-monophosphat 97.0 0.0052 1.8E-07 60.4 11.9 126 129-260 284-419 (556)
195 2ztj_A Homocitrate synthase; ( 96.9 0.039 1.3E-06 51.9 17.0 167 71-252 26-219 (382)
196 1vkf_A Glycerol uptake operon 96.9 0.0027 9.3E-08 54.4 8.0 98 135-259 80-183 (188)
197 1ps9_A 2,4-dienoyl-COA reducta 96.9 0.0035 1.2E-07 62.8 10.1 130 133-267 149-323 (671)
198 1m5w_A Pyridoxal phosphate bio 96.9 0.056 1.9E-06 47.8 16.2 194 71-275 26-239 (243)
199 3aty_A Tcoye, prostaglandin F2 96.9 0.0088 3E-07 56.4 11.9 123 134-267 183-349 (379)
200 2yc6_A Triosephosphate isomera 96.8 0.028 9.7E-07 50.3 14.4 129 131-268 81-250 (257)
201 2hsa_B 12-oxophytodienoate red 96.8 0.014 4.6E-07 55.5 13.0 128 133-267 179-361 (402)
202 1mo0_A TIM, triosephosphate is 96.7 0.019 6.4E-07 51.9 12.6 132 131-268 99-265 (275)
203 3sy1_A UPF0001 protein YGGS; e 96.7 0.024 8.3E-07 50.2 13.1 176 74-263 42-232 (245)
204 3r89_A Orotidine 5'-phosphate 96.7 0.013 4.6E-07 53.3 11.2 164 101-278 72-288 (290)
205 2vxn_A Triosephosphate isomera 96.7 0.039 1.3E-06 49.2 13.9 131 131-268 81-248 (251)
206 1tre_A Triosephosphate isomera 96.7 0.033 1.1E-06 49.8 13.4 131 131-269 80-248 (255)
207 3bg3_A Pyruvate carboxylase, m 96.6 0.039 1.3E-06 56.1 15.4 191 71-271 126-358 (718)
208 1icp_A OPR1, 12-oxophytodienoa 96.6 0.0085 2.9E-07 56.4 9.9 127 133-267 175-343 (376)
209 3tdn_A FLR symmetric alpha-bet 96.6 0.0037 1.3E-07 54.8 6.8 77 178-262 38-116 (247)
210 1b9b_A TIM, protein (triosepho 96.6 0.012 4.1E-07 52.7 9.8 129 131-267 81-250 (255)
211 2jgq_A Triosephosphate isomera 96.5 0.016 5.5E-07 51.2 10.4 129 131-267 74-230 (233)
212 2zbt_A Pyridoxal biosynthesis 96.5 0.0017 5.7E-08 58.8 4.0 73 62-147 80-154 (297)
213 2i9e_A Triosephosphate isomera 96.5 0.027 9.2E-07 50.5 11.7 131 131-267 79-244 (259)
214 1r2r_A TIM, triosephosphate is 96.5 0.024 8.2E-07 50.5 11.3 130 131-266 80-244 (248)
215 3vkj_A Isopentenyl-diphosphate 96.5 0.054 1.8E-06 50.8 14.2 137 113-258 117-300 (368)
216 2agk_A 1-(5-phosphoribosyl)-5- 96.4 0.0045 1.5E-07 55.3 6.1 70 176-260 39-109 (260)
217 3o6c_A PNP synthase, pyridoxin 96.3 0.24 8.3E-06 44.1 16.8 191 70-275 25-259 (260)
218 3ewb_X 2-isopropylmalate synth 96.3 0.068 2.3E-06 48.5 13.7 185 71-271 28-250 (293)
219 3krs_A Triosephosphate isomera 96.3 0.1 3.4E-06 47.1 14.4 131 131-267 103-267 (271)
220 3ta6_A Triosephosphate isomera 96.2 0.13 4.3E-06 46.3 14.2 130 131-267 85-252 (267)
221 3s6d_A Putative triosephosphat 96.1 0.047 1.6E-06 50.1 11.2 140 131-274 133-309 (310)
222 3qst_A Triosephosphate isomera 96.1 0.078 2.7E-06 47.4 12.3 130 131-266 82-247 (255)
223 1m6j_A TIM, TPI, triosephospha 96.0 0.023 7.9E-07 51.0 8.7 130 131-267 87-254 (261)
224 3l5a_A NADH/flavin oxidoreduct 96.0 0.046 1.6E-06 52.1 11.3 128 134-267 179-359 (419)
225 3p6l_A Sugar phosphate isomera 96.0 0.13 4.4E-06 44.5 13.2 127 56-186 8-153 (262)
226 2yr1_A 3-dehydroquinate dehydr 95.9 0.073 2.5E-06 47.4 11.7 123 53-177 15-153 (257)
227 1wa3_A 2-keto-3-deoxy-6-phosph 95.9 0.032 1.1E-06 47.1 8.9 113 117-253 11-130 (205)
228 3o1n_A 3-dehydroquinate dehydr 95.9 0.043 1.5E-06 49.5 10.0 121 52-173 34-167 (276)
229 1izc_A Macrophomate synthase i 95.9 0.054 1.8E-06 50.3 10.8 173 73-257 53-277 (339)
230 1ep3_A Dihydroorotate dehydrog 95.9 0.029 9.9E-07 50.4 8.8 137 57-194 98-270 (311)
231 1r30_A Biotin synthase; SAM ra 95.8 0.32 1.1E-05 44.8 16.0 193 70-272 102-330 (369)
232 1ney_A TIM, triosephosphate is 95.8 0.059 2E-06 47.9 10.4 130 131-267 79-243 (247)
233 4g1k_A Triosephosphate isomera 95.8 0.14 4.8E-06 46.1 12.8 128 131-264 105-265 (272)
234 1jvn_A Glutamine, bifunctional 95.7 0.013 4.4E-07 57.9 6.3 78 177-259 282-372 (555)
235 3ivs_A Homocitrate synthase, m 95.7 0.33 1.1E-05 46.3 15.7 181 71-270 62-275 (423)
236 1ka9_F Imidazole glycerol phos 95.7 0.017 5.9E-07 50.3 6.2 48 209-261 63-111 (252)
237 3t7v_A Methylornithine synthas 95.6 0.072 2.5E-06 48.8 10.7 180 68-258 92-302 (350)
238 3eeg_A 2-isopropylmalate synth 95.6 0.14 4.8E-06 47.1 12.5 187 70-271 28-251 (325)
239 1thf_D HISF protein; thermophI 95.6 0.022 7.5E-07 49.6 6.7 48 209-261 62-110 (253)
240 3kxq_A Triosephosphate isomera 95.6 0.12 4.2E-06 46.6 11.7 128 131-264 105-266 (275)
241 2uv8_G Fatty acid synthase sub 95.5 0.057 2E-06 60.7 10.8 146 105-259 632-807 (2051)
242 3b0p_A TRNA-dihydrouridine syn 95.4 0.19 6.3E-06 46.6 12.7 139 56-194 56-225 (350)
243 2y88_A Phosphoribosyl isomeras 95.4 0.03 1E-06 48.5 6.9 74 177-259 33-108 (244)
244 1vzw_A Phosphoribosyl isomeras 95.3 0.027 9.2E-07 48.9 6.4 74 177-259 34-109 (244)
245 1ub3_A Aldolase protein; schif 95.3 0.065 2.2E-06 46.8 8.8 166 71-259 20-212 (220)
246 3th6_A Triosephosphate isomera 95.3 0.19 6.6E-06 44.7 11.9 125 131-260 80-238 (249)
247 2v5b_A Triosephosphate isomera 95.3 0.47 1.6E-05 42.0 14.4 130 131-267 74-240 (244)
248 1o94_A Tmadh, trimethylamine d 95.3 0.093 3.2E-06 53.1 10.9 128 134-266 158-333 (729)
249 2cu0_A Inosine-5'-monophosphat 95.2 0.28 9.6E-06 47.2 13.8 126 128-259 230-362 (486)
250 1f6y_A 5-methyltetrahydrofolat 95.2 0.079 2.7E-06 47.3 9.2 98 68-173 23-124 (262)
251 2w6r_A Imidazole glycerol phos 95.2 0.045 1.5E-06 48.0 7.5 33 226-258 74-107 (266)
252 3fok_A Uncharacterized protein 95.2 0.043 1.5E-06 50.3 7.4 126 130-274 133-295 (307)
253 2qr6_A IMP dehydrogenase/GMP r 95.2 0.074 2.5E-06 49.8 9.3 97 152-255 142-240 (393)
254 2qf7_A Pyruvate carboxylase pr 95.2 0.23 8E-06 53.1 14.1 192 71-271 574-805 (1165)
255 3k30_A Histamine dehydrogenase 95.2 0.061 2.1E-06 54.0 9.1 126 134-267 165-337 (690)
256 4a3u_A NCR, NADH\:flavin oxido 95.1 0.096 3.3E-06 48.7 9.8 126 134-267 161-328 (358)
257 2h9a_A Carbon monoxide dehydro 95.1 0.15 5.2E-06 49.0 11.4 129 104-253 144-292 (445)
258 3iv3_A Tagatose 1,6-diphosphat 95.1 0.27 9.1E-06 45.5 12.5 174 71-260 54-286 (332)
259 1gvf_A Tagatose-bisphosphate a 95.1 0.61 2.1E-05 42.2 14.6 188 62-258 21-236 (286)
260 4djd_D C/Fe-SP, corrinoid/iron 95.0 0.17 5.7E-06 46.7 10.8 170 71-254 81-302 (323)
261 1sfl_A 3-dehydroquinate dehydr 94.9 0.35 1.2E-05 42.4 12.4 118 57-177 3-139 (238)
262 3oa3_A Aldolase; structural ge 94.9 0.16 5.6E-06 46.0 10.3 114 131-251 132-260 (288)
263 3r79_A Uncharacterized protein 94.9 0.53 1.8E-05 41.5 13.5 168 74-264 43-225 (244)
264 3rmj_A 2-isopropylmalate synth 94.8 0.62 2.1E-05 43.5 14.3 185 71-271 35-257 (370)
265 3lmz_A Putative sugar isomeras 94.8 0.21 7.3E-06 43.0 10.5 123 57-186 17-152 (257)
266 3tjl_A NADPH dehydrogenase; OL 94.7 0.15 5.3E-06 48.4 10.0 127 134-267 177-359 (407)
267 2yci_X 5-methyltetrahydrofolat 94.7 0.7 2.4E-05 41.3 13.9 98 68-173 32-133 (271)
268 3rlg_A Sphingomyelin phosphodi 94.7 0.82 2.8E-05 41.6 14.3 188 70-270 36-278 (302)
269 3khj_A Inosine-5-monophosphate 94.6 0.46 1.6E-05 44.2 13.0 111 130-254 61-173 (361)
270 1q7z_A 5-methyltetrahydrofolat 94.6 0.22 7.5E-06 49.2 11.2 167 68-253 338-537 (566)
271 1qo2_A Molecule: N-((5-phospho 94.5 0.027 9.3E-07 48.9 4.1 37 226-262 73-110 (241)
272 2hwg_A Phosphoenolpyruvate-pro 94.5 0.23 7.8E-06 49.3 11.0 120 134-256 380-528 (575)
273 1h5y_A HISF; histidine biosynt 94.5 0.096 3.3E-06 44.9 7.4 48 208-260 64-112 (253)
274 3n9r_A Fructose-bisphosphate a 94.3 2 6.7E-05 39.3 16.0 182 66-258 21-259 (307)
275 1mzh_A Deoxyribose-phosphate a 94.3 0.53 1.8E-05 40.7 11.8 111 131-251 76-201 (225)
276 3nvt_A 3-deoxy-D-arabino-heptu 94.2 0.33 1.1E-05 45.8 11.0 169 68-255 154-347 (385)
277 4fo4_A Inosine 5'-monophosphat 94.1 0.67 2.3E-05 43.3 12.9 113 130-254 62-177 (366)
278 2xz9_A Phosphoenolpyruvate-pro 94.0 0.089 3E-06 48.5 6.5 121 133-256 130-279 (324)
279 3hbl_A Pyruvate carboxylase; T 94.0 0.72 2.4E-05 49.3 14.3 171 71-251 556-764 (1150)
280 2isw_A Putative fructose-1,6-b 93.9 0.69 2.4E-05 42.6 12.2 190 62-258 21-259 (323)
281 2q02_A Putative cytoplasmic pr 93.8 0.4 1.4E-05 41.2 10.2 131 58-188 7-161 (272)
282 3q94_A Fructose-bisphosphate a 93.7 2.5 8.7E-05 38.1 15.5 181 68-258 30-240 (288)
283 3k13_A 5-methyltetrahydrofolat 93.7 0.94 3.2E-05 41.2 12.7 102 66-172 33-140 (300)
284 3gr7_A NADPH dehydrogenase; fl 93.7 0.38 1.3E-05 44.3 10.3 119 74-193 148-306 (340)
285 2i1o_A Nicotinate phosphoribos 93.7 0.091 3.1E-06 49.8 6.1 51 210-260 253-304 (398)
286 4h3d_A 3-dehydroquinate dehydr 93.6 0.57 1.9E-05 41.6 10.9 130 53-184 15-161 (258)
287 1jub_A Dihydroorotate dehydrog 93.5 0.27 9.4E-06 44.2 8.9 85 58-146 94-193 (311)
288 4fxs_A Inosine-5'-monophosphat 93.4 0.63 2.2E-05 45.1 11.7 123 71-199 231-368 (496)
289 1ct5_A Protein (yeast hypothet 93.4 2 6.7E-05 37.9 14.1 172 74-263 53-249 (256)
290 1ea0_A Glutamate synthase [NAD 93.2 0.48 1.6E-05 51.6 11.3 128 130-258 952-1097(1479)
291 2pgw_A Muconate cycloisomerase 93.1 0.98 3.4E-05 41.9 12.2 118 125-258 146-275 (384)
292 3tr9_A Dihydropteroate synthas 93.0 0.64 2.2E-05 42.6 10.4 99 68-176 47-159 (314)
293 3gk0_A PNP synthase, pyridoxin 93.0 1.1 3.7E-05 40.2 11.5 142 101-254 35-183 (278)
294 3aam_A Endonuclease IV, endoiv 92.6 1 3.5E-05 38.8 10.9 130 59-188 3-162 (270)
295 2yxb_A Coenzyme B12-dependent 92.6 1.8 6.2E-05 35.4 11.8 84 159-252 40-126 (161)
296 3hgj_A Chromate reductase; TIM 92.6 1 3.5E-05 41.4 11.5 119 74-193 156-317 (349)
297 1eye_A DHPS 1, dihydropteroate 92.6 1.2 4.1E-05 40.1 11.5 96 68-173 27-132 (280)
298 2oz8_A MLL7089 protein; struct 92.5 0.46 1.6E-05 44.3 9.0 117 126-254 145-273 (389)
299 4avf_A Inosine-5'-monophosphat 92.4 0.87 3E-05 44.0 11.1 124 70-199 228-366 (490)
300 1m5w_A Pyridoxal phosphate bio 92.4 1.7 5.9E-05 38.3 11.8 128 125-258 25-159 (243)
301 3ngj_A Deoxyribose-phosphate a 92.3 0.65 2.2E-05 41.0 9.2 111 131-251 101-226 (239)
302 1zco_A 2-dehydro-3-deoxyphosph 92.3 2.8 9.5E-05 37.2 13.4 182 58-258 24-231 (262)
303 3usb_A Inosine-5'-monophosphat 92.3 1.2 4E-05 43.3 11.9 116 128-254 196-325 (511)
304 3ndo_A Deoxyribose-phosphate a 92.2 1.9 6.7E-05 37.7 12.1 170 60-251 17-216 (231)
305 3cny_A Inositol catabolism pro 92.2 0.55 1.9E-05 41.0 8.7 124 58-189 10-181 (301)
306 1aj0_A DHPS, dihydropteroate s 92.2 0.41 1.4E-05 43.2 8.0 95 69-173 37-141 (282)
307 1rvg_A Fructose-1,6-bisphospha 92.1 3.7 0.00013 37.4 14.3 181 68-258 26-257 (305)
308 1yx1_A Hypothetical protein PA 92.1 0.85 2.9E-05 39.3 9.7 127 58-188 6-151 (264)
309 2wqd_A Phosphoenolpyruvate-pro 92.1 0.39 1.3E-05 47.6 8.2 121 133-256 381-530 (572)
310 1tx2_A DHPS, dihydropteroate s 92.1 0.37 1.3E-05 43.9 7.5 99 69-176 62-170 (297)
311 3qja_A IGPS, indole-3-glycerol 92.0 2.8 9.4E-05 37.4 13.2 136 104-255 52-190 (272)
312 4djd_C C/Fe-SP, corrinoid/iron 92.0 1 3.6E-05 43.1 10.9 135 105-254 145-294 (446)
313 3kws_A Putative sugar isomeras 92.0 1.4 4.7E-05 38.3 11.1 215 42-270 9-276 (287)
314 3noy_A 4-hydroxy-3-methylbut-2 92.0 0.2 6.8E-06 46.8 5.6 106 59-173 32-141 (366)
315 1ofd_A Ferredoxin-dependent gl 92.0 0.57 1.9E-05 51.2 9.9 122 136-258 995-1132(1520)
316 2og9_A Mandelate racemase/muco 92.0 0.96 3.3E-05 42.1 10.5 113 126-253 162-287 (393)
317 3l52_A Orotidine 5'-phosphate 91.9 0.43 1.5E-05 43.2 7.7 75 101-177 75-164 (284)
318 2ovl_A Putative racemase; stru 91.7 1 3.5E-05 41.5 10.4 118 126-258 146-276 (371)
319 1n7k_A Deoxyribose-phosphate a 91.7 1 3.6E-05 39.4 9.8 118 131-258 94-227 (234)
320 1mdl_A Mandelate racemase; iso 91.6 0.92 3.1E-05 41.6 9.8 117 125-256 143-272 (359)
321 2dqw_A Dihydropteroate synthas 91.5 1.9 6.4E-05 39.1 11.5 95 68-173 50-154 (294)
322 1z41_A YQJM, probable NADH-dep 91.4 0.99 3.4E-05 41.3 9.8 120 72-193 146-306 (338)
323 1i60_A IOLI protein; beta barr 91.4 1.4 4.9E-05 37.6 10.3 129 59-189 2-165 (278)
324 1xg4_A Probable methylisocitra 91.3 0.2 6.9E-06 45.5 4.9 192 57-272 17-255 (295)
325 3p3b_A Mandelate racemase/muco 91.3 0.99 3.4E-05 42.1 9.8 117 128-254 150-285 (392)
326 1vcv_A Probable deoxyribose-ph 91.3 3.1 0.00011 36.2 12.3 113 131-249 73-211 (226)
327 2e6f_A Dihydroorotate dehydrog 91.2 0.15 5.1E-06 46.0 4.0 134 57-194 93-273 (314)
328 3dx5_A Uncharacterized protein 91.2 0.74 2.5E-05 39.9 8.3 127 59-188 2-162 (286)
329 1ypf_A GMP reductase; GUAC, pu 91.1 2.3 7.9E-05 38.8 12.0 119 74-197 109-242 (336)
330 1qop_A Tryptophan synthase alp 91.0 1.6 5.4E-05 38.5 10.5 147 116-274 17-204 (268)
331 2zad_A Muconate cycloisomerase 91.0 2.7 9.2E-05 38.2 12.3 123 117-253 130-264 (345)
332 3r2g_A Inosine 5'-monophosphat 91.0 1.6 5.5E-05 40.7 10.9 110 130-254 58-169 (361)
333 1a3w_A Pyruvate kinase; allost 90.9 0.3 1E-05 47.6 6.0 139 130-274 198-352 (500)
334 1nu5_A Chloromuconate cycloiso 90.8 2.9 0.0001 38.3 12.4 115 125-254 141-269 (370)
335 2nql_A AGR_PAT_674P, isomerase 90.8 0.95 3.3E-05 42.1 9.1 114 125-254 163-289 (388)
336 3r12_A Deoxyribose-phosphate a 90.7 5.2 0.00018 35.6 13.4 112 131-251 117-242 (260)
337 3no3_A Glycerophosphodiester p 90.7 4.8 0.00016 34.7 13.0 29 69-97 20-51 (238)
338 1rvk_A Isomerase/lactonizing e 90.5 2.6 8.9E-05 38.8 11.8 115 125-254 148-282 (382)
339 3ayv_A Putative uncharacterize 90.3 1.1 3.6E-05 38.4 8.4 116 67-189 7-154 (254)
340 3txv_A Probable tagatose 6-pho 90.3 7 0.00024 37.4 14.7 198 60-259 22-294 (450)
341 2qgy_A Enolase from the enviro 90.2 1.7 5.8E-05 40.4 10.4 116 125-255 148-276 (391)
342 3apt_A Methylenetetrahydrofola 90.2 6.4 0.00022 35.6 13.9 151 70-236 29-209 (310)
343 1olt_A Oxygen-independent copr 90.1 4.8 0.00016 38.1 13.6 126 105-232 125-288 (457)
344 2p8b_A Mandelate racemase/muco 90.0 1.1 3.7E-05 41.2 8.7 123 117-255 132-268 (369)
345 2hzg_A Mandelate racemase/muco 89.9 3.1 0.00011 38.7 12.0 126 116-256 134-279 (401)
346 2pp0_A L-talarate/galactarate 89.8 1.6 5.5E-05 40.7 9.8 113 126-253 175-300 (398)
347 4af0_A Inosine-5'-monophosphat 89.6 0.78 2.7E-05 45.1 7.6 121 73-200 283-419 (556)
348 2f6u_A GGGPS, (S)-3-O-geranylg 89.5 1.7 5.7E-05 38.1 9.1 74 120-199 10-89 (234)
349 3i4k_A Muconate lactonizing en 89.5 4.8 0.00016 37.3 12.9 127 116-257 138-278 (383)
350 1vc4_A Indole-3-glycerol phosp 89.5 1.2 4.1E-05 39.3 8.2 81 176-268 66-148 (254)
351 3pm6_A Putative fructose-bisph 89.5 10 0.00035 34.5 14.5 187 62-258 30-255 (306)
352 2gdq_A YITF; mandelate racemas 89.4 1.1 3.9E-05 41.5 8.4 116 125-253 135-265 (382)
353 3mz2_A Glycerophosphoryl diest 89.3 5.2 0.00018 35.7 12.5 29 69-97 46-77 (292)
354 3jva_A Dipeptide epimerase; en 89.3 3 0.0001 38.2 11.2 126 118-254 131-264 (354)
355 1jcn_A Inosine monophosphate d 89.3 2.5 8.4E-05 40.8 11.0 120 70-195 254-388 (514)
356 3ovp_A Ribulose-phosphate 3-ep 89.3 1.5 5E-05 38.1 8.5 138 123-274 12-167 (228)
357 1tzz_A Hypothetical protein L1 89.2 0.66 2.2E-05 43.2 6.6 115 126-255 165-296 (392)
358 1tkk_A Similar to chloromucona 89.1 2.2 7.5E-05 39.1 10.1 125 117-254 131-268 (366)
359 1f76_A Dihydroorotate dehydrog 89.1 1.6 5.6E-05 39.5 9.1 84 58-146 134-246 (336)
360 3aal_A Probable endonuclease 4 89.1 2.6 8.9E-05 37.0 10.3 132 58-189 6-173 (303)
361 3rpd_A Methionine synthase (B1 89.0 0.86 2.9E-05 42.4 7.2 89 72-170 173-287 (357)
362 3dg3_A Muconate cycloisomerase 89.0 2.6 8.9E-05 38.8 10.5 124 116-254 129-266 (367)
363 2wqp_A Polysialic acid capsule 88.9 11 0.00037 34.9 14.5 181 58-251 20-233 (349)
364 3qc0_A Sugar isomerase; TIM ba 88.8 0.86 2.9E-05 39.1 6.7 208 57-274 4-271 (275)
365 2vc6_A MOSA, dihydrodipicolina 88.8 12 0.00042 33.2 14.7 172 66-256 17-207 (292)
366 2qgq_A Protein TM_1862; alpha- 88.7 12 0.00042 33.1 16.3 130 68-200 34-199 (304)
367 3inp_A D-ribulose-phosphate 3- 88.6 1.5 5E-05 38.7 8.1 144 118-274 30-189 (246)
368 2ftp_A Hydroxymethylglutaryl-C 88.5 1.2 4.3E-05 40.0 7.8 99 68-170 157-270 (302)
369 2fiq_A Putative tagatose 6-pho 88.5 7.8 0.00027 36.8 13.5 195 61-259 16-286 (420)
370 2qde_A Mandelate racemase/muco 88.5 0.74 2.5E-05 42.9 6.4 114 125-254 144-270 (397)
371 3lot_A Uncharacterized protein 88.3 3.2 0.00011 38.0 10.4 195 71-274 33-287 (314)
372 1ccw_A Protein (glutamate muta 88.3 4.7 0.00016 31.8 10.3 101 159-274 25-134 (137)
373 2rdx_A Mandelate racemase/muco 88.2 1.7 5.8E-05 40.2 8.7 117 125-258 144-271 (379)
374 1tqx_A D-ribulose-5-phosphate 88.2 3 0.0001 36.2 9.7 141 123-274 13-171 (227)
375 3qz6_A HPCH/HPAI aldolase; str 88.2 4.3 0.00015 35.8 11.0 75 117-193 16-94 (261)
376 2vp8_A Dihydropteroate synthas 88.2 1.7 6E-05 39.8 8.6 93 71-173 66-168 (318)
377 2ps2_A Putative mandelate race 88.1 2 6.8E-05 39.5 9.0 122 116-254 136-269 (371)
378 3dip_A Enolase; structural gen 87.9 3.9 0.00013 38.4 11.1 117 125-256 158-297 (410)
379 2poz_A Putative dehydratase; o 87.8 1.4 4.7E-05 41.0 7.8 117 125-254 136-280 (392)
380 4hb7_A Dihydropteroate synthas 87.6 8.6 0.00029 34.4 12.5 142 74-231 34-201 (270)
381 3cqj_A L-ribulose-5-phosphate 87.5 3.8 0.00013 35.6 10.2 131 58-188 17-186 (295)
382 3flu_A DHDPS, dihydrodipicolin 87.5 15 0.00052 32.7 15.4 172 66-256 24-213 (297)
383 3b8i_A PA4872 oxaloacetate dec 87.5 0.6 2.1E-05 42.2 4.9 191 57-272 21-251 (287)
384 3tva_A Xylose isomerase domain 87.5 1.3 4.5E-05 38.5 7.1 115 69-189 20-175 (290)
385 2hxt_A L-fuconate dehydratase; 87.3 2 6.9E-05 40.6 8.8 114 126-254 198-324 (441)
386 1qtw_A Endonuclease IV; DNA re 87.3 4.3 0.00015 34.8 10.3 217 59-280 3-285 (285)
387 1eep_A Inosine 5'-monophosphat 87.2 2.5 8.5E-05 39.5 9.2 77 60-144 144-221 (404)
388 3qze_A DHDPS, dihydrodipicolin 87.1 17 0.00057 32.8 14.9 172 66-256 40-229 (314)
389 2h9a_B CO dehydrogenase/acetyl 87.1 8.6 0.00029 34.9 12.5 135 70-218 74-229 (310)
390 2o7s_A DHQ-SDH PR, bifunctiona 87.0 1.9 6.4E-05 41.8 8.5 87 57-147 4-101 (523)
391 3nav_A Tryptophan synthase alp 86.8 3.7 0.00013 36.6 9.7 155 108-274 12-207 (271)
392 3l5l_A Xenobiotic reductase A; 86.7 3.7 0.00013 37.9 10.0 119 74-193 162-324 (363)
393 1x7f_A Outer surface protein; 86.7 5.4 0.00018 37.5 11.1 106 129-249 45-163 (385)
394 3ctl_A D-allulose-6-phosphate 86.7 3.7 0.00013 35.6 9.5 76 59-145 59-135 (231)
395 4dxk_A Mandelate racemase / mu 86.7 1.5 5.1E-05 41.1 7.4 115 125-254 154-291 (400)
396 2egz_A 3-dehydroquinate dehydr 86.6 14 0.00046 31.7 13.0 109 59-177 2-122 (219)
397 3eb2_A Putative dihydrodipicol 86.6 14 0.00049 33.0 13.7 172 66-256 21-210 (300)
398 1tqj_A Ribulose-phosphate 3-ep 86.5 1 3.5E-05 39.0 5.7 122 60-194 65-201 (230)
399 2ze3_A DFA0005; organic waste 86.4 7.2 0.00025 34.8 11.4 167 77-260 30-238 (275)
400 2i14_A Nicotinate-nucleotide p 86.4 0.58 2E-05 44.2 4.4 50 210-260 251-301 (395)
401 2zds_A Putative DNA-binding pr 86.4 9.1 0.00031 33.7 12.2 130 59-189 4-200 (340)
402 2fli_A Ribulose-phosphate 3-ep 86.4 1.5 5.1E-05 36.9 6.6 57 209-272 49-107 (220)
403 1rd5_A Tryptophan synthase alp 86.3 2.8 9.6E-05 36.5 8.6 135 108-255 10-174 (262)
404 2y5s_A DHPS, dihydropteroate s 86.3 3.4 0.00012 37.3 9.3 95 68-173 44-148 (294)
405 2e28_A Pyruvate kinase, PK; al 86.2 2.6 8.8E-05 41.8 9.1 151 114-274 162-333 (587)
406 3vzx_A Heptaprenylglyceryl pho 86.1 1.1 3.8E-05 39.1 5.8 73 121-199 9-87 (228)
407 2gl5_A Putative dehydratase pr 86.1 2.7 9.2E-05 39.2 8.8 115 126-253 150-298 (410)
408 3vnd_A TSA, tryptophan synthas 86.0 1.6 5.6E-05 38.9 6.9 155 108-274 10-205 (267)
409 3ffs_A Inosine-5-monophosphate 86.0 3 0.0001 39.4 9.0 117 73-197 146-278 (400)
410 3ozy_A Putative mandelate race 85.8 4 0.00014 37.9 9.8 127 116-258 139-281 (389)
411 3na8_A Putative dihydrodipicol 85.7 17 0.00057 32.8 13.7 172 66-256 41-231 (315)
412 3f4w_A Putative hexulose 6 pho 85.7 1.4 4.8E-05 36.9 6.1 89 69-162 113-204 (211)
413 3o6c_A PNP synthase, pyridoxin 85.7 3.5 0.00012 36.6 8.7 119 126-253 26-151 (260)
414 2qdd_A Mandelate racemase/muco 85.7 5.1 0.00017 36.8 10.4 119 125-257 144-270 (378)
415 1w3i_A EDA, 2-keto-3-deoxy glu 85.6 19 0.00065 32.0 15.3 167 66-256 16-199 (293)
416 4dwd_A Mandelate racemase/muco 85.6 5.8 0.0002 37.0 10.8 124 116-254 126-271 (393)
417 2r14_A Morphinone reductase; H 85.6 2.2 7.5E-05 39.8 7.9 122 71-193 167-327 (377)
418 2c6q_A GMP reductase 2; TIM ba 85.4 2.5 8.5E-05 39.0 8.1 66 179-254 121-189 (351)
419 3tj4_A Mandelate racemase; eno 85.4 6.9 0.00024 36.0 11.2 118 126-253 151-277 (372)
420 3bjs_A Mandelate racemase/muco 85.3 2.2 7.6E-05 40.3 7.9 114 125-254 183-311 (428)
421 3qvq_A Phosphodiesterase OLEI0 85.3 3.1 0.00011 36.1 8.3 86 100-192 149-236 (252)
422 1sjd_A N-acylamino acid racema 85.2 2.3 7.9E-05 39.0 7.8 111 125-254 140-263 (368)
423 3gka_A N-ethylmaleimide reduct 85.2 1.9 6.6E-05 40.0 7.3 114 74-193 165-315 (361)
424 1vs1_A 3-deoxy-7-phosphoheptul 85.1 20 0.00069 31.9 14.6 172 68-258 50-246 (276)
425 1zfj_A Inosine monophosphate d 85.1 13 0.00045 35.3 13.3 117 128-255 173-303 (491)
426 1vyr_A Pentaerythritol tetrani 85.1 5 0.00017 37.1 10.1 122 71-193 162-322 (364)
427 1gte_A Dihydropyrimidine dehyd 85.0 10 0.00035 39.7 13.5 83 58-144 635-734 (1025)
428 1sgj_A Citrate lyase, beta sub 84.9 1.9 6.5E-05 38.4 6.9 181 61-249 8-216 (284)
429 2ox4_A Putative mandelate race 84.9 2.2 7.4E-05 39.7 7.5 115 126-253 146-289 (403)
430 3r0u_A Enzyme of enolase super 84.8 5.8 0.0002 36.8 10.4 126 116-254 132-269 (379)
431 2q02_A Putative cytoplasmic pr 84.6 13 0.00046 31.3 12.1 95 127-224 21-133 (272)
432 1vrd_A Inosine-5'-monophosphat 84.6 5.7 0.00019 37.9 10.5 119 70-194 236-369 (494)
433 3e49_A Uncharacterized protein 84.6 8.5 0.00029 35.0 11.1 194 71-274 33-284 (311)
434 3luf_A Two-component system re 84.5 8.6 0.0003 33.0 10.8 151 103-274 63-243 (259)
435 3kts_A Glycerol uptake operon 84.5 1 3.6E-05 38.4 4.7 82 56-147 100-181 (192)
436 3w01_A Heptaprenylglyceryl pho 84.5 2.8 9.6E-05 36.8 7.6 74 120-199 13-92 (235)
437 2v9d_A YAGE; dihydrodipicolini 84.5 19 0.00063 33.0 13.5 175 66-256 48-241 (343)
438 3ro6_B Putative chloromuconate 84.4 3.9 0.00013 37.4 9.0 124 116-255 130-267 (356)
439 4g9p_A 4-hydroxy-3-methylbut-2 84.1 9.8 0.00033 35.9 11.4 112 115-234 21-147 (406)
440 1i60_A IOLI protein; beta barr 83.9 14 0.00048 31.2 11.9 142 126-270 15-192 (278)
441 1ypx_A Putative vitamin-B12 in 83.9 1.8 6E-05 40.4 6.4 76 73-148 170-275 (375)
442 3ddm_A Putative mandelate race 83.9 5.8 0.0002 36.9 10.0 112 126-253 155-280 (392)
443 3igs_A N-acetylmannosamine-6-p 83.8 8.2 0.00028 33.3 10.3 113 73-194 91-210 (232)
444 3q58_A N-acetylmannosamine-6-p 83.8 6.7 0.00023 33.8 9.7 113 73-194 91-210 (229)
445 1r0m_A N-acylamino acid racema 83.8 2.4 8.3E-05 39.0 7.3 111 125-254 147-269 (375)
446 3tsm_A IGPS, indole-3-glycerol 83.8 2.9 9.9E-05 37.4 7.5 73 176-259 80-154 (272)
447 1o5k_A DHDPS, dihydrodipicolin 83.7 22 0.00076 31.8 13.6 174 67-256 30-222 (306)
448 2o56_A Putative mandelate race 83.7 1.9 6.6E-05 40.1 6.6 113 126-253 152-295 (407)
449 2r91_A 2-keto-3-deoxy-(6-phosp 83.7 23 0.00078 31.3 15.0 167 66-256 15-198 (286)
450 2g0w_A LMO2234 protein; putati 83.5 1.8 6E-05 38.1 6.0 138 48-188 13-174 (296)
451 3u0h_A Xylose isomerase domain 83.5 2.6 8.8E-05 36.1 6.9 131 58-189 4-170 (281)
452 1h1y_A D-ribulose-5-phosphate 83.5 5 0.00017 34.2 8.7 122 60-195 67-202 (228)
453 1vhn_A Putative flavin oxidore 83.5 2.1 7.3E-05 38.6 6.6 133 57-194 58-213 (318)
454 3fst_A 5,10-methylenetetrahydr 83.4 18 0.00062 32.6 12.8 135 131-272 45-200 (304)
455 3e02_A Uncharacterized protein 83.3 11 0.00037 34.3 11.3 194 71-274 33-284 (311)
456 2vef_A Dihydropteroate synthas 83.2 9.4 0.00032 34.7 10.8 91 74-173 37-137 (314)
457 2zc8_A N-acylamino acid racema 83.2 2.6 8.8E-05 38.7 7.2 110 125-253 140-261 (369)
458 1vr6_A Phospho-2-dehydro-3-deo 83.2 14 0.00048 34.1 12.1 172 68-258 118-314 (350)
459 3e96_A Dihydrodipicolinate syn 83.1 13 0.00043 33.6 11.7 174 66-256 29-216 (316)
460 2gou_A Oxidoreductase, FMN-bin 83.1 6.2 0.00021 36.5 9.7 122 71-193 162-321 (365)
461 2f7f_A Nicotinate phosphoribos 83.1 1.2 4.1E-05 43.3 5.0 46 214-259 273-321 (494)
462 2otd_A Glycerophosphodiester p 83.0 4.4 0.00015 34.8 8.3 92 100-200 146-239 (247)
463 3i10_A Putative glycerophospho 83.0 7.4 0.00025 34.6 9.9 184 69-272 31-273 (278)
464 3no5_A Uncharacterized protein 82.9 9.3 0.00032 34.1 10.5 193 71-274 31-255 (275)
465 3sjn_A Mandelate racemase/muco 82.8 3.7 0.00013 37.9 8.1 112 128-254 148-275 (374)
466 2ekc_A AQ_1548, tryptophan syn 82.8 4.5 0.00015 35.5 8.3 146 116-274 17-205 (262)
467 3ih1_A Methylisocitrate lyase; 82.7 2.5 8.7E-05 38.4 6.7 153 104-272 78-263 (305)
468 2qkf_A 3-deoxy-D-manno-octulos 82.6 5.2 0.00018 35.8 8.8 185 58-258 16-240 (280)
469 2x7v_A Probable endonuclease 4 82.6 8.1 0.00028 33.0 9.9 119 71-189 13-168 (287)
470 3apt_A Methylenetetrahydrofola 82.5 22 0.00074 32.1 13.0 137 131-272 35-197 (310)
471 3hzh_A Chemotaxis response reg 82.5 10 0.00036 29.1 9.7 58 209-275 98-156 (157)
472 3chv_A Prokaryotic domain of u 82.4 4.4 0.00015 36.5 8.1 195 71-274 35-259 (284)
473 3r8r_A Transaldolase; pentose 82.4 19 0.00066 30.9 11.9 177 67-259 5-191 (212)
474 2qq6_A Mandelate racemase/muco 82.3 6.6 0.00023 36.6 9.7 113 126-253 149-290 (410)
475 3stp_A Galactonate dehydratase 82.2 9.8 0.00034 35.7 10.9 123 116-253 168-310 (412)
476 3toy_A Mandelate racemase/muco 82.1 5 0.00017 37.3 8.7 124 116-254 157-294 (383)
477 1ydn_A Hydroxymethylglutaryl-C 82.1 26 0.0009 30.9 14.5 140 129-272 30-192 (295)
478 1p0k_A Isopentenyl-diphosphate 82.0 21 0.00072 32.3 12.8 72 72-144 129-208 (349)
479 3daq_A DHDPS, dihydrodipicolin 82.0 27 0.00092 30.9 14.1 173 66-256 19-209 (292)
480 3cwo_X Beta/alpha-barrel prote 81.8 6 0.00021 32.5 8.4 92 71-166 131-225 (237)
481 3vni_A Xylose isomerase domain 81.8 4.8 0.00016 34.8 8.1 125 60-189 4-175 (294)
482 1geq_A Tryptophan synthase alp 81.7 2.8 9.5E-05 36.0 6.4 56 209-271 68-130 (248)
483 3b4u_A Dihydrodipicolinate syn 81.6 28 0.00096 30.9 13.3 171 66-256 20-214 (294)
484 2o55_A Putative glycerophospho 81.5 25 0.00084 30.2 16.9 178 69-275 22-258 (258)
485 2ols_A Phosphoenolpyruvate syn 81.5 5.9 0.0002 40.6 9.7 119 134-255 633-778 (794)
486 2nuw_A 2-keto-3-deoxygluconate 81.5 28 0.00095 30.8 13.6 165 66-256 16-197 (288)
487 3vkj_A Isopentenyl-diphosphate 81.4 6.8 0.00023 36.4 9.4 63 81-145 148-218 (368)
488 3eoo_A Methylisocitrate lyase; 81.4 4.4 0.00015 36.7 7.8 153 104-272 72-259 (298)
489 1yxy_A Putative N-acetylmannos 81.4 8.1 0.00028 32.7 9.3 117 72-194 90-215 (234)
490 2ehh_A DHDPS, dihydrodipicolin 81.2 29 0.00098 30.8 17.0 172 66-256 17-207 (294)
491 3jr2_A Hexulose-6-phosphate sy 81.1 7.6 0.00026 32.8 8.9 117 125-255 16-140 (218)
492 1tv5_A Dhodehase, dihydroorota 80.9 14 0.00049 35.1 11.6 80 115-194 296-402 (443)
493 3l5a_A NADH/flavin oxidoreduct 80.8 2.5 8.5E-05 40.1 6.2 121 73-193 173-345 (419)
494 2qul_A D-tagatose 3-epimerase; 80.5 3.7 0.00013 35.3 6.8 130 57-189 1-176 (290)
495 1vd6_A Glycerophosphoryl diest 80.4 6.1 0.00021 33.5 8.1 111 69-216 21-141 (224)
496 3can_A Pyruvate-formate lyase- 80.3 12 0.00042 30.1 9.7 105 141-252 6-130 (182)
497 3c8f_A Pyruvate formate-lyase 80.3 23 0.0008 29.2 12.5 109 138-252 69-197 (245)
498 3tji_A Mandelate racemase/muco 80.3 8.6 0.00029 36.2 9.8 174 60-254 78-303 (422)
499 3ppg_A 5-methyltetrahydroptero 80.3 5.4 0.00018 40.9 8.8 95 72-170 618-723 (789)
500 1qpo_A Quinolinate acid phosph 79.9 2.5 8.5E-05 38.1 5.6 84 105-193 183-268 (284)
No 1
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=100.00 E-value=6.7e-65 Score=458.32 Aligned_cols=217 Identities=43% Similarity=0.717 Sum_probs=208.2
Q ss_pred CceEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCC-CCCeeEEEEecChhhHHHHHH
Q 023494 57 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIVEPEQRVPDFI 135 (281)
Q Consensus 57 ~~~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t-~~~idaHLmv~dp~~~i~~~~ 135 (281)
+++|+|||||+|+.+|+++++.++++|+||+|+|||||+||||++||+.++++||+.+ ++++|+|||++||++|++.++
T Consensus 27 ~~~i~pSilsaD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv~~p~~~i~~~~ 106 (246)
T 3inp_A 27 HIQINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPVDALIESFA 106 (246)
T ss_dssp CCEEEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCSCEEEEEECSSCHHHHHHHH
T ss_pred CCeeehhhhcCChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCCeEEEEEeeCCHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999987 899999999999999999999
Q ss_pred HcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCCEEEEEeecCCCCCCccchhHHHHHHH
Q 023494 136 KAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISD 215 (281)
Q Consensus 136 ~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~ 215 (281)
++|||+||||+|+ .+++.++++.||++|+++|+++||.||++.++++++.+|+|++|+|+|||+||+|+|++++||++
T Consensus 107 ~aGAd~itvH~Ea--~~~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~l~~vD~VlvMsV~PGfgGQ~fi~~~l~KI~~ 184 (246)
T 3inp_A 107 KAGATSIVFHPEA--SEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVLIMSVNPGFGGQKFIPAMLDKAKE 184 (246)
T ss_dssp HHTCSEEEECGGG--CSCHHHHHHHHHTTTSEEEEEECTTCCSGGGTTTGGGCSEEEEECSCTTC--CCCCTTHHHHHHH
T ss_pred HcCCCEEEEcccc--chhHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHhcCCEEEEeeecCCCCCcccchHHHHHHHH
Confidence 9999999999996 47899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhcC
Q 023494 216 LRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKR 275 (281)
Q Consensus 216 lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~~ 275 (281)
+|++++++|++++|+||||||++|+++++++|||++|+||+||+++||++++++|++.+.
T Consensus 185 lr~~~~~~~~~~~I~VDGGI~~~ti~~~~~aGAD~~V~GSaIf~a~dp~~~i~~l~~~i~ 244 (246)
T 3inp_A 185 ISKWISSTDRDILLEIDGGVNPYNIAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMRDELN 244 (246)
T ss_dssp HHHHHHHHTSCCEEEEESSCCTTTHHHHHTTTCCEEEESHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCeeEEEECCcCHHHHHHHHHcCCCEEEEehHHhCCCCHHHHHHHHHHHHh
Confidence 999999888889999999999999999999999999999999999999999999998754
No 2
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=100.00 E-value=1.8e-62 Score=439.19 Aligned_cols=215 Identities=32% Similarity=0.612 Sum_probs=206.9
Q ss_pred eEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcC
Q 023494 59 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAG 138 (281)
Q Consensus 59 ~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aG 138 (281)
+|+|||||+|+.+|+++++.+ +.|+||+|+|||||+||||++||+.++++||+.+++++|+|||++||++|++.++++|
T Consensus 2 ~i~pSila~D~~~l~~~i~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~~~~~~dvhLmv~dp~~~i~~~~~aG 80 (231)
T 3ctl_A 2 KISPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMVTRPQDYIAQLARAG 80 (231)
T ss_dssp EEEEBGGGSCGGGHHHHHHHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTCCSCEEEEEESSCGGGTHHHHHHHT
T ss_pred eEEeehhhCChhhHHHHHHHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcC
Confidence 699999999999999999999 8999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCCEEEEEeecCCCCCCccchhHHHHHHHHHH
Q 023494 139 ADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRR 218 (281)
Q Consensus 139 Ad~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~ 218 (281)
||++|||+|+. ..++.++++.+|++|+++|+++||+||++.++++++.+|+|++|+|+|||+||+|.|.+++||+++|+
T Consensus 81 Ad~itvh~Ea~-~~~~~~~i~~i~~~G~k~gv~lnp~tp~~~~~~~l~~~D~VlvmsV~pGfggQ~f~~~~l~kI~~lr~ 159 (231)
T 3ctl_A 81 ADFITLHPETI-NGQAFRLIDEIRRHDMKVGLILNPETPVEAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKLAELKA 159 (231)
T ss_dssp CSEEEECGGGC-TTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCTTCSSCCCCTTHHHHHHHHHH
T ss_pred CCEEEECcccC-CccHHHHHHHHHHcCCeEEEEEECCCcHHHHHHHHhcCCEEEEeeeccCcCCccccHHHHHHHHHHHH
Confidence 99999999961 46899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEc-ccccCCCC-HHHHHHHHHHhcC
Q 023494 219 MCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAG-SAVFGAKD-YAEAIKGIKTSKR 275 (281)
Q Consensus 219 l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvG-SaIf~a~d-p~~~~~~l~~~~~ 275 (281)
+++++|++++|+||||||++|+++++++|||++|+| |+||+++| |++++++|++.++
T Consensus 160 ~~~~~~~~~~I~VdGGI~~~~~~~~~~aGAd~~V~G~saif~~~d~~~~~~~~l~~~~~ 218 (231)
T 3ctl_A 160 WREREGLEYEIEVDGSCNQATYEKLMAAGADVFIVGTSGLFNHAENIDEAWRIMTAQIL 218 (231)
T ss_dssp HHHHHTCCCEEEEESCCSTTTHHHHHHHTCCEEEECTTTTGGGCSSHHHHHHHHHHHHH
T ss_pred HHhccCCCceEEEECCcCHHHHHHHHHcCCCEEEEccHHHhCCCCcHHHHHHHHHHHHH
Confidence 998888889999999999999999999999999999 99999888 9999999988654
No 3
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=100.00 E-value=3.9e-61 Score=429.70 Aligned_cols=213 Identities=39% Similarity=0.625 Sum_probs=203.7
Q ss_pred CceEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcC--CCCCeeEEEEecChhhHHHHH
Q 023494 57 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV--TDLPLDVHLMIVEPEQRVPDF 134 (281)
Q Consensus 57 ~~~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~--t~~~idaHLmv~dp~~~i~~~ 134 (281)
.++|+|||||+|+.+|+++++.++++|+||+|+|||||+||||++||++++++||+. ++.++|+|||++||++|++.+
T Consensus 4 ~~~i~psil~~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~p~~~i~~~ 83 (228)
T 3ovp_A 4 GCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPM 83 (228)
T ss_dssp CCEEEEBCTTSCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECSCGGGGHHHH
T ss_pred CcEeeeeheeCCchhHHHHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeCCHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999998 689999999999999999999
Q ss_pred HHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCCEEEEEeecCCCCCCccchhHHHHHH
Q 023494 135 IKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKIS 214 (281)
Q Consensus 135 ~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~~~~l~kI~ 214 (281)
+++|||+||||+|+ .+++.++++.+|++|+++|++++|+||++.++++++.+|+|++|+|+|||+||+|.|++++||+
T Consensus 84 ~~aGad~itvH~Ea--~~~~~~~i~~i~~~G~k~gval~p~t~~e~l~~~l~~~D~Vl~msv~pGf~Gq~f~~~~l~ki~ 161 (228)
T 3ovp_A 84 AVAGANQYTFHLEA--TENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVH 161 (228)
T ss_dssp HHHTCSEEEEEGGG--CSCHHHHHHHHHHTTCEEEEEECTTSCGGGTGGGGGGCSEEEEESSCTTTCSCCCCGGGHHHHH
T ss_pred HHcCCCEEEEccCC--chhHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHhccCCeEEEeeecCCCCCcccCHHHHHHHH
Confidence 99999999999996 4689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhcC
Q 023494 215 DLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKR 275 (281)
Q Consensus 215 ~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~~ 275 (281)
++|++.. +++|+||||||++|+++++++|||++|+||+||+++||++++++|++.++
T Consensus 162 ~lr~~~~----~~~I~VdGGI~~~t~~~~~~aGAd~~VvGsaIf~a~dp~~~~~~l~~~~~ 218 (228)
T 3ovp_A 162 WLRTQFP----SLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCS 218 (228)
T ss_dssp HHHHHCT----TCEEEEESSCSTTTHHHHHHHTCCEEEESHHHHTCSCHHHHHHHHHHHHH
T ss_pred HHHHhcC----CCCEEEeCCcCHHHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHHH
Confidence 9998753 47899999999999999999999999999999999999999999998654
No 4
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=100.00 E-value=1.6e-60 Score=425.41 Aligned_cols=212 Identities=37% Similarity=0.645 Sum_probs=201.9
Q ss_pred CceEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCC-CCCeeEEEEecChhhHHHHHH
Q 023494 57 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIVEPEQRVPDFI 135 (281)
Q Consensus 57 ~~~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t-~~~idaHLmv~dp~~~i~~~~ 135 (281)
..+|+|||||+|+.+|+++++.++++|+||+|+|||||+||||++||+..+++||+.+ +.++|+||||+||++|++.++
T Consensus 5 ~~~i~pSila~D~~~l~~~i~~~~~~g~d~iHvDvmDg~fvpn~t~G~~~v~~lr~~~p~~~~dvhLmv~dp~~~i~~~~ 84 (227)
T 1tqx_A 5 KAIIAPSVLASNISKLAEETQRMESLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKYTKSIFFDVHLMVEYPEKYVPLLK 84 (227)
T ss_dssp CCEEEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCCCHHHHHHHGGGCSSCEEEEEEESSCGGGGGGGCT
T ss_pred CCeEEeehhcCChhhHHHHHHHHHHcCCCEEEEEEEeCCcCcchhcCHHHHHHHHHhCCCCcEEEEEEEcCHHHHHHHHH
Confidence 4679999999999999999999999999999999999999999999999999999987 899999999999999999888
Q ss_pred HcCCCEEEEcccccccccHHHHHH---HHHHcCCcEEEEECCCCCHHHHHHhhc--cCCEEEEEeecCCCCCCccchhHH
Q 023494 136 KAGADIVSVHCEQSSTIHLHRTLN---QIKDLGAKAGVVLNPATSLSAIECVLD--VVDLVLIMSVNPGFGGQSFIESQV 210 (281)
Q Consensus 136 ~aGAd~Itvh~Ea~~~~~i~~~l~---~ik~~G~k~Glai~p~t~ie~~~~~l~--~vD~IlvmsV~pG~~GQ~f~~~~l 210 (281)
+ ||++|||+|+. .+++.++++ .+|++|+++|+++||+||++.++++++ .+|+|++|+|+|||+||+|.|.++
T Consensus 85 ~--Ad~itvH~ea~-~~~~~~~i~~~~~i~~~G~k~gvalnp~tp~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l 161 (227)
T 1tqx_A 85 T--SNQLTFHFEAL-NEDTERCIQLAKEIRDNNLWCGISIKPKTDVQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMM 161 (227)
T ss_dssp T--SSEEEEEGGGG-TTCHHHHHHHHHHHHTTTCEEEEEECTTSCGGGGHHHHTTTCCSEEEEESSCTTCSSCCCCGGGH
T ss_pred h--CCEEEEeecCC-ccCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHhhcCCcCEEEEeeeccCCCCcccchHHH
Confidence 8 99999999973 338999999 999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhcC
Q 023494 211 KKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKR 275 (281)
Q Consensus 211 ~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~~ 275 (281)
+||+++|++++ +++|+||||||++|+++++++|||++|+||+||+++||++++++|++.++
T Consensus 162 ~ki~~lr~~~~----~~~I~VdGGI~~~ti~~~~~aGAd~~V~GsaIf~~~d~~~~i~~l~~~~~ 222 (227)
T 1tqx_A 162 GKVSFLRKKYK----NLNIQVDGGLNIETTEISASHGANIIVAGTSIFNAEDPKYVIDTMRVSVQ 222 (227)
T ss_dssp HHHHHHHHHCT----TCEEEEESSCCHHHHHHHHHHTCCEEEESHHHHTCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcc----CCeEEEECCCCHHHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHHH
Confidence 99999999874 57999999999999999999999999999999999999999999988654
No 5
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=100.00 E-value=3.5e-58 Score=412.74 Aligned_cols=211 Identities=25% Similarity=0.361 Sum_probs=203.1
Q ss_pred eEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcC
Q 023494 59 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAG 138 (281)
Q Consensus 59 ~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aG 138 (281)
+|+|||+|+|+.+|+++++.++++|+||+|+|+|||+|+||++||+..+++||+.++. |+|||++||++|++.++++|
T Consensus 15 ~i~psila~D~~~l~~~i~~~~~~gad~lhvDvmDG~fvpn~t~G~~~v~~lr~~~~~--DvhLMv~~p~~~i~~~~~aG 92 (237)
T 3cu2_A 15 KLSVGILSANWLQLNEEVTTLLENQINVLHFDIADGQFSSLFTVGAIGIKYFPTHCFK--DVHLMVRNQLEVAKAVVANG 92 (237)
T ss_dssp CEEEEGGGSCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCTHHHHTSCTTSEE--EEEEECSCHHHHHHHHHHTT
T ss_pred eEEEeeeeCCcccHHHHHHHHHHcCCCEEEEEEecCccccchhhhHHHHHHHhhhCCC--CeEEEEECHHHHHHHHHHcC
Confidence 5999999999999999999999999999999999999999999999999999998764 99999999999999999999
Q ss_pred CCEEEEcccccccccHHHHHHHHHHc---------CCcEEEEECCCCCHHHHHHhhccCCEEEEEeecCCCCCCccchhH
Q 023494 139 ADIVSVHCEQSSTIHLHRTLNQIKDL---------GAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQ 209 (281)
Q Consensus 139 Ad~Itvh~Ea~~~~~i~~~l~~ik~~---------G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~~~~ 209 (281)
||++|||.|+ .+++.++++.+|++ |+++|+++||+||++.++++++.+|+|++|+|+|||+||+|.+.+
T Consensus 93 Ad~itvH~ea--~~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp~~~l~~~l~~~D~vlvMsv~pgfggq~f~~~~ 170 (237)
T 3cu2_A 93 ANLVTLQLEQ--YHDFALTIEWLAKQKTTYANQVYPVLIGACLCPETPISELEPYLDQIDVIQLLTLDPRNGTKYPSELI 170 (237)
T ss_dssp CSEEEEETTC--TTSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGGGTTTTTTCSEEEEESEETTTTEECCHHHH
T ss_pred CCEEEEecCC--cccHHHHHHHHHhcccccccccCCceEEEEEeCCChHHHHHHHhhcCceeeeeeeccCcCCeecChhH
Confidence 9999999996 47799999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHH--cCCcEEEEcccccCCCCHHHHHHHHHHhc
Q 023494 210 VKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIE--AGANALVAGSAVFGAKDYAEAIKGIKTSK 274 (281)
Q Consensus 210 l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~--aGAD~~VvGSaIf~a~dp~~~~~~l~~~~ 274 (281)
++||+++|+++++++++++|+||||||.+|++++++ +|||++|+||+||++ ||++++++|++.+
T Consensus 171 l~ki~~lr~~~~~~~~~~~I~vdGGI~~~~~~~~~~~~aGad~~VvGSaIf~~-d~~~~~~~l~~~~ 236 (237)
T 3cu2_A 171 LDRVIQVEKRLGNRRVEKLINIDGSMTLELAKYFKQGTHQIDWLVSGSALFSG-ELKTNLKVWKSSI 236 (237)
T ss_dssp HHHHHHHHHHHGGGGGGCEEEEESSCCHHHHHHHHHSSSCCCCEEECGGGGSS-CHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcCCCceEEEECCcCHHHHHHHHHhCCCCcEEEEeeHHhCC-CHHHHHHHHHHhh
Confidence 999999999998777789999999999999999999 999999999999998 9999999998764
No 6
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=100.00 E-value=9.5e-56 Score=394.96 Aligned_cols=218 Identities=69% Similarity=1.135 Sum_probs=204.2
Q ss_pred ceEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHc
Q 023494 58 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA 137 (281)
Q Consensus 58 ~~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~a 137 (281)
++|+|||+|+|+.++.++++.++++|+||+|+|+|||+|+||+++|++.+++||+.++.++++|||++||++|++.+.++
T Consensus 5 ~~i~psila~D~~~l~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~~~~~~vhlmv~dp~~~i~~~~~a 84 (230)
T 1tqj_A 5 IVVAPSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLTKKTLDVHLMIVEPEKYVEDFAKA 84 (230)
T ss_dssp CEEEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGCCSEEEEEEESSSGGGTHHHHHHH
T ss_pred cEEEEEeeecCHhHHHHHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhcCCcEEEEEEccCHHHHHHHHHHc
Confidence 57999999999999999999999999999999999999999999999999999999888999999999999999999999
Q ss_pred CCCEEEEccc--ccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCCEEEEEeecCCCCCCccchhHHHHHHH
Q 023494 138 GADIVSVHCE--QSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISD 215 (281)
Q Consensus 138 GAd~Itvh~E--a~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~ 215 (281)
|||+||+|.| + .+++.++++.++++|+++|++++|+|+.+.++++++.+|||++|+++||++||+|.+..+++|++
T Consensus 85 Gadgv~vh~e~~~--~~~~~~~~~~i~~~g~~~gv~~~p~t~~e~~~~~~~~~D~v~~msv~pg~ggq~~~~~~~~~i~~ 162 (230)
T 1tqj_A 85 GADIISVHVEHNA--SPHLHRTLCQIRELGKKAGAVLNPSTPLDFLEYVLPVCDLILIMSVNPGFGGQSFIPEVLPKIRA 162 (230)
T ss_dssp TCSEEEEECSTTT--CTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCC----CCCCGGGHHHHHH
T ss_pred CCCEEEECccccc--chhHHHHHHHHHHcCCcEEEEEeCCCcHHHHHHHHhcCCEEEEEEeccccCCccCcHHHHHHHHH
Confidence 9999999999 7 36789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhcCcC
Q 023494 216 LRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRPQ 277 (281)
Q Consensus 216 lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~~~~ 277 (281)
+|++.++++++++|+||||||.+|++++.++|||++|+||+||+++||++++++|++.+++.
T Consensus 163 lr~~~~~~~~~~~I~v~GGI~~~~~~~~~~aGad~vvvGSai~~a~d~~~~~~~l~~~~~~~ 224 (230)
T 1tqj_A 163 LRQMCDERGLDPWIEVDGGLKPNNTWQVLEAGANAIVAGSAVFNAPNYAEAIAGVRNSKRPE 224 (230)
T ss_dssp HHHHHHHHTCCCEEEEESSCCTTTTHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHTCCC--
T ss_pred HHHHHHhcCCCCcEEEECCcCHHHHHHHHHcCCCEEEECHHHHCCCCHHHHHHHHHHHHHhh
Confidence 99999877788999999999999999999999999999999999999999999999876643
No 7
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=100.00 E-value=1.9e-49 Score=352.81 Aligned_cols=213 Identities=40% Similarity=0.682 Sum_probs=201.4
Q ss_pred CceEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHH
Q 023494 57 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIK 136 (281)
Q Consensus 57 ~~~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~ 136 (281)
..+|+|||+|+|+.++.++++.++++|+||+|+|+|||+|+||+++|++.+++||+.++.++++|||++||++|++.+.+
T Consensus 6 ~~~i~psi~a~d~~~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~~~~~~v~lmv~d~~~~i~~~~~ 85 (228)
T 1h1y_A 6 AAKIAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTNPSDYVEPLAK 85 (228)
T ss_dssp CCEEEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSCGGGGHHHHHH
T ss_pred CCeEEEEeeeCCHHHHHHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhcCCcEEEEEEecCHHHHHHHHHH
Confidence 45799999999999999999999999999999999999999999999999999999887899999999999999999999
Q ss_pred cCCCEEEEcccccccccH-HHHHHHHHHcCCcEEEEECCCCCHHHHHHhhc---cCCEEEEEeecCCCCCCccchhHHHH
Q 023494 137 AGADIVSVHCEQSSTIHL-HRTLNQIKDLGAKAGVVLNPATSLSAIECVLD---VVDLVLIMSVNPGFGGQSFIESQVKK 212 (281)
Q Consensus 137 aGAd~Itvh~Ea~~~~~i-~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~---~vD~IlvmsV~pG~~GQ~f~~~~l~k 212 (281)
+|+|+|++|.|. .++. .+.++.+++.|+++|++++|+|+.+.++++++ .+|||++|+++||++||+|.+..+++
T Consensus 86 agad~v~vH~~~--~~~~~~~~~~~i~~~g~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~~~~l~~ 163 (228)
T 1h1y_A 86 AGASGFTFHIEV--SRDNWQELIQSIKAKGMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEK 163 (228)
T ss_dssp HTCSEEEEEGGG--CTTTHHHHHHHHHHTTCEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCSSCCCCGGGHHH
T ss_pred cCCCEEEECCCC--cccHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCCCCcccCCHHHHHH
Confidence 999999999996 3556 89999999999999999999999999999998 89999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhcC
Q 023494 213 ISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKR 275 (281)
Q Consensus 213 I~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~~ 275 (281)
++++|++.. +++|.||||||++|+.+++++|||++|+||+||+++||++++++|++.++
T Consensus 164 i~~~~~~~~----~~pi~v~GGI~~~ni~~~~~aGaD~vvvGsai~~~~d~~~~~~~l~~~~~ 222 (228)
T 1h1y_A 164 VRALRKKYP----SLDIEVDGGLGPSTIDVAASAGANCIVAGSSIFGAAEPGEVISALRKSVE 222 (228)
T ss_dssp HHHHHHHCT----TSEEEEESSCSTTTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHhcC----CCCEEEECCcCHHHHHHHHHcCCCEEEECHHHHCCCCHHHHHHHHHHHHH
Confidence 999999863 47899999999999999999999999999999999999999999988665
No 8
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=100.00 E-value=7e-45 Score=322.59 Aligned_cols=225 Identities=91% Similarity=1.380 Sum_probs=208.5
Q ss_pred cccCCCCCceEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhh
Q 023494 50 VDKFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQ 129 (281)
Q Consensus 50 ~~~~~~~~~~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~ 129 (281)
.+.++++.++|+|||+++|+.++.+.++.+.++|+|++|+|+|||+|+||+++|++.+++||+.++.++++|+|++||.+
T Consensus 3 ~~~~~~~~~~i~p~i~a~d~~~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~~~~~~v~l~vnd~~~ 82 (230)
T 1rpx_A 3 VDKFSKSDIIVSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLPLDVHLMIVEPDQ 82 (230)
T ss_dssp GGGSCTTSCEEEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGCCSCEEEEEESSSHHH
T ss_pred CCccCCCceEEEEEeecCCHHHHHHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhccCCcEEEEEEecCHHH
Confidence 34455667789999999999999999999999999999999999999999999999999999988889999999999999
Q ss_pred HHHHHHHcCCCEEEEccc--ccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCCEEEEEeecCCCCCCccch
Q 023494 130 RVPDFIKAGADIVSVHCE--QSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIE 207 (281)
Q Consensus 130 ~i~~~~~aGAd~Itvh~E--a~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~~ 207 (281)
+++.+.++|+|+|++|.+ .. +++.++++.++++|+++|++++|+|+.+.++++...+|+|++|+++||++||.|.+
T Consensus 83 ~v~~~~~~Gad~v~vh~~~~~~--~~~~~~~~~~~~~g~~ig~~~~p~t~~e~~~~~~~~~d~vl~~~~~pg~~g~~~~~ 160 (230)
T 1rpx_A 83 RVPDFIKAGADIVSVHCEQSST--IHLHRTINQIKSLGAKAGVVLNPGTPLTAIEYVLDAVDLVLIMSVNPGFGGQSFIE 160 (230)
T ss_dssp HHHHHHHTTCSEEEEECSTTTC--SCHHHHHHHHHHTTSEEEEEECTTCCGGGGTTTTTTCSEEEEESSCTTCSSCCCCT
T ss_pred HHHHHHHcCCCEEEEEecCccc--hhHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHhhCCEEEEEEEcCCCCCccccH
Confidence 999999999999999998 62 56788999999999999999999999999988888899999999999999999999
Q ss_pred hHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhcCc
Q 023494 208 SQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRP 276 (281)
Q Consensus 208 ~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~~~ 276 (281)
..+++++++|+..++.+.++++.++||||++|+.+++++|||.+|+||+||+++||.+++++|++.+++
T Consensus 161 ~~~~~i~~l~~~~~~~~~~~pi~v~GGI~~~n~~~~~~aGad~vvvgSaI~~a~dp~~a~~~l~~~~~~ 229 (230)
T 1rpx_A 161 SQVKKISDLRKICAERGLNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAPDYAEAIKGIKTSKRP 229 (230)
T ss_dssp THHHHHHHHHHHHHHHTCCCEEEEESSCCTTTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHcCCCEEEEChhhhCCCCHHHHHHHHHHHHhc
Confidence 999999999999875556689999999999999999999999999999999999999999999987654
No 9
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=100.00 E-value=2e-43 Score=310.05 Aligned_cols=217 Identities=45% Similarity=0.761 Sum_probs=203.0
Q ss_pred CceEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHH
Q 023494 57 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIK 136 (281)
Q Consensus 57 ~~~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~ 136 (281)
.++|+|||+|+|+.++.++++.+.+.|+|++|+|+|||+|++++++|++.+++||+.++.++++|+|++||.++++.+.+
T Consensus 3 ~~~~~~~i~a~D~~~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~~~~~~~v~l~v~d~~~~i~~~~~ 82 (220)
T 2fli_A 3 TLKIAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVFDCHLMVVDPERYVEAFAQ 82 (220)
T ss_dssp CCEEEEBGGGSCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSSGGGGHHHHHH
T ss_pred CcEEEEEEEeCCHHHHHHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHhCCCCEEEEEeecCHHHHHHHHHH
Confidence 35799999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred cCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCCEEEEEeecCCCCCCccchhHHHHHHHH
Q 023494 137 AGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDL 216 (281)
Q Consensus 137 aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~l 216 (281)
+|+|+|++|.+. .+++.+.++.++++|+++|++++|.|+.+.++++.+.+|+|++|+++||++||.|.+..+++++++
T Consensus 83 ~gad~v~vh~~~--~~~~~~~~~~~~~~g~~i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g~~g~~~~~~~~~~i~~~ 160 (220)
T 2fli_A 83 AGADIMTIHTES--TRHIHGALQKIKAAGMKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATV 160 (220)
T ss_dssp HTCSEEEEEGGG--CSCHHHHHHHHHHTTSEEEEEECTTSCGGGGGGGTTTCSEEEEESSCTTCSSCCCCGGGHHHHHHH
T ss_pred cCCCEEEEccCc--cccHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHhhCCEEEEEEECCCCcccccCHHHHHHHHHH
Confidence 999999999996 367889999999999999999999999999888888899999999999999999999999999999
Q ss_pred HHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhcC
Q 023494 217 RRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKR 275 (281)
Q Consensus 217 r~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~~ 275 (281)
|++..+.+.++++.++|||+++|+.++.++|||.+|+||+||+++||++++++|++.++
T Consensus 161 ~~~~~~~~~~~~i~v~GGI~~~~~~~~~~~Gad~vvvGsai~~~~d~~~a~~~~~~~~~ 219 (220)
T 2fli_A 161 AKWRDEKGLSFDIEVDGGVDNKTIRACYEAGANVFVAGSYLFKASDLVSQVQTLRTALN 219 (220)
T ss_dssp HHHHHHTTCCCEEEEESSCCTTTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHHHHC
T ss_pred HHHHHhcCCCceEEEECcCCHHHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHhc
Confidence 99886555568899999999999999999999999999999999999999999987653
No 10
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=100.00 E-value=1.5e-37 Score=272.46 Aligned_cols=199 Identities=19% Similarity=0.175 Sum_probs=180.3
Q ss_pred EEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcC--CCCCeeEEEE--ecChhhHHHHHHHc
Q 023494 62 PSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV--TDLPLDVHLM--IVEPEQRVPDFIKA 137 (281)
Q Consensus 62 pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~--t~~~idaHLm--v~dp~~~i~~~~~a 137 (281)
+.++|+|+.+++++++.+++.|.+++|+|+|||+| ++||++.+++||+. +.+++|+|+| .++|.+|++.++++
T Consensus 1 ~lila~D~~~l~~~~~~~~~~~~~~~~~kv~~~~f---~~~G~~~i~~lr~~~~~~v~~D~kl~DI~~t~~~~v~~~~~~ 77 (208)
T 2czd_A 1 MIVLALDVYEGERAIKIAKSVKDYISMIKVNWPLI---LGSGVDIIRRLKEETGVEIIADLKLADIPNTNRLIARKVFGA 77 (208)
T ss_dssp CEEEECCCCSHHHHHHHHHHHGGGCSEEEEEHHHH---HHHCTTHHHHHHHHHCCEEEEEEEECSCHHHHHHHHHHHHHT
T ss_pred CeEEEecCCCHHHHHHHHHHhcccccEEEecHHHH---HhhCHHHHHHHHHcCCCEEEEEeeeCchHHHHHHHHHHHHhc
Confidence 46899999999999999999999999999999999 88999999999987 7789999999 99999999999999
Q ss_pred CCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHh-hccCCEEEEEeecCCCCCCccchhHHHHHHHH
Q 023494 138 GADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECV-LDVVDLVLIMSVNPGFGGQSFIESQVKKISDL 216 (281)
Q Consensus 138 GAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~-l~~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~l 216 (281)
|||++|+|.+.. . ..++.+++.+ |+.++|.|+.+.+.++ .+.+|+++.|+++||++||.|.+..+++++++
T Consensus 78 Gad~vtvh~~~g--~---~~i~~~~~~~---gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~~~~~~i~~l 149 (208)
T 2czd_A 78 GADYVIVHTFVG--R---DSVMAVKELG---EIIMVVEMSHPGALEFINPLTDRFIEVANEIEPFGVIAPGTRPERIGYI 149 (208)
T ss_dssp TCSEEEEESTTC--H---HHHHHHHTTS---EEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCCSEEECCCSSTHHHHHH
T ss_pred CCCEEEEeccCC--H---HHHHHHHHhC---CcEEEEecCCcchhhHHHHHHHHHHHHHHHhCCcEEEECCCChHHHHHH
Confidence 999999999963 2 3488888888 9999999999877665 67788999999999999999999999999999
Q ss_pred HHHhhhcCCCCeEEEecCCChh--cHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhcC
Q 023494 217 RRMCLEKGVNPWIEVDGGVGPK--NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKR 275 (281)
Q Consensus 217 r~l~~~~~~~~~I~VDGGI~~e--~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~~ 275 (281)
|+.++ .++.+ |||||+++ ++.+++++|||++|+||+||+++||.++++++++.++
T Consensus 150 r~~~~---~~~~i-v~gGI~~~g~~~~~~~~aGad~vvvGr~I~~a~dp~~~~~~l~~~i~ 206 (208)
T 2czd_A 150 RDRLK---EGIKI-LAPGIGAQGGKAKDAVKAGADYIIVGRAIYNAPNPREAAKAIYDEIR 206 (208)
T ss_dssp HHHSC---TTCEE-EECCCCSSTTHHHHHHHHTCSEEEECHHHHTSSSHHHHHHHHHHHHC
T ss_pred HHhCC---CCeEE-EECCCCCCCCCHHHHHHcCCCEEEEChHHhcCCCHHHHHHHHHHHHh
Confidence 98863 34556 99999998 8999999999999999999999999999999998764
No 11
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=100.00 E-value=6e-35 Score=257.71 Aligned_cols=201 Identities=16% Similarity=0.218 Sum_probs=173.5
Q ss_pred EEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcC-CC--CCeeEEEEecChhhHHHHHHHcC
Q 023494 62 PSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TD--LPLDVHLMIVEPEQRVPDFIKAG 138 (281)
Q Consensus 62 pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~-t~--~~idaHLmv~dp~~~i~~~~~aG 138 (281)
.-++|+|+.+++++++.+++.+ + |+|+||++|++++++|+++|++||+. ++ +++|+||| ..|..|++.+.++|
T Consensus 8 ~lilalD~~~~~~~~~~~~~~~-~--~vd~ie~g~~~~~~~G~~~i~~lr~~~~~~~i~ld~~l~-d~p~~~~~~~~~aG 83 (218)
T 3jr2_A 8 MIQIALDQTNLTDAVAVASNVA-S--YVDVIEVGTILAFAEGMKAVSTLRHNHPNHILVCDMKTT-DGGAILSRMAFEAG 83 (218)
T ss_dssp EEEEEECCSSHHHHHHHHHHHG-G--GCSEEEECHHHHHHHTTHHHHHHHHHCTTSEEEEEEEEC-SCHHHHHHHHHHHT
T ss_pred CeEEEeCCCCHHHHHHHHHHhc-C--CceEEEeCcHHHHhcCHHHHHHHHHhCCCCcEEEEEeec-ccHHHHHHHHHhcC
Confidence 4589999999999999998752 2 57888889999999999999999986 55 56688888 67888899999999
Q ss_pred CCEEEEcccccccccHHHHHHHHHHcCCcEEE-EECCCCCHHHHHHhhc-cCCEEE-EEeecCCCCCCccchhHHHHHHH
Q 023494 139 ADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGV-VLNPATSLSAIECVLD-VVDLVL-IMSVNPGFGGQSFIESQVKKISD 215 (281)
Q Consensus 139 Ad~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Gl-ai~p~t~ie~~~~~l~-~vD~Il-vmsV~pG~~GQ~f~~~~l~kI~~ 215 (281)
||++++|.+.. .+++.++++.++++|+++++ .++|.|+ ++..++.+ .+||+. .|++.||++||.|.++.+++|++
T Consensus 84 ad~i~vh~~~~-~~~~~~~~~~~~~~g~~~~~d~l~~~T~-~~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~~~l~~i~~ 161 (218)
T 3jr2_A 84 ADWITVSAAAH-IATIAACKKVADELNGEIQIEIYGNWTM-QDAKAWVDLGITQAIYHRSRDAELAGIGWTTDDLDKMRQ 161 (218)
T ss_dssp CSEEEEETTSC-HHHHHHHHHHHHHHTCEEEEECCSSCCH-HHHHHHHHTTCCEEEEECCHHHHHHTCCSCHHHHHHHHH
T ss_pred CCEEEEecCCC-HHHHHHHHHHHHHhCCccceeeeecCCH-HHHHHHHHcCccceeeeeccccccCCCcCCHHHHHHHHH
Confidence 99999999962 34578999999999999999 8999987 66666655 689875 58888999999999999999988
Q ss_pred HHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhcC
Q 023494 216 LRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKR 275 (281)
Q Consensus 216 lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~~ 275 (281)
++. .+++|.|+|||+++|+++++++|||++|+||+||+++||.+++ ++++.++
T Consensus 162 ~~~------~~~pi~v~GGI~~~~~~~~~~aGAd~vvvGsaI~~a~dp~~a~-~l~~~~~ 214 (218)
T 3jr2_A 162 LSA------LGIELSITGGIVPEDIYLFEGIKTKTFIAGRALAGAEGQQTAA-ALREQID 214 (218)
T ss_dssp HHH------TTCEEEEESSCCGGGGGGGTTSCEEEEEESGGGSHHHHHHHHH-HHHHHHH
T ss_pred HhC------CCCCEEEECCCCHHHHHHHHHcCCCEEEEchhhcCCCCHHHHH-HHHHHHH
Confidence 764 2578999999999999999999999999999999999999999 9988664
No 12
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=100.00 E-value=5.7e-34 Score=250.92 Aligned_cols=199 Identities=15% Similarity=0.126 Sum_probs=167.6
Q ss_pred eEEEeccCccCHHHHHHHHHHcCCCeEE-EEeeeCcccccccCCHHHHHHcCcC---CCCCeeEEEEecChhhHHHHHHH
Q 023494 61 SPSILSANFAKLGEQVKAVELAGCDWIH-VDVMDGRFVPNITIGPLVVDALRPV---TDLPLDVHLMIVEPEQRVPDFIK 136 (281)
Q Consensus 61 ~pSila~D~~~l~~~l~~l~~~G~d~iH-iDImDG~fvpn~~~G~~~I~~ir~~---t~~~idaHLmv~dp~~~i~~~~~ 136 (281)
++|++|+|+.+++++++.+++.| +++| +||||++| ++||+..|+.||+. +++++|+||| ..|..+++.+.+
T Consensus 4 ~~~ilalD~~~~~~~~~~~~~~~-~~v~~~kv~~~~f---~~~G~~~i~~l~~~~p~~~v~lD~kl~-dip~t~~~~~~~ 78 (216)
T 1q6o_A 4 PMLQVALDNQTMDSAYETTRLIA-EEVDIIEVGTILC---VGEGVRAVRDLKALYPHKIVLADAKIA-DAGKILSRMCFE 78 (216)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHG-GGCSEEEECHHHH---HHHCTHHHHHHHHHCTTSEEEEEEEEC-SCHHHHHHHHHH
T ss_pred CCeEEEECCCCHHHHHHHHHHhc-ccCCEEEECHHHH---HHhCHHHHHHHHHhCCCCeEEEEEEec-ccHHHHHHHHHh
Confidence 58999999999999999999876 3333 69999988 78999999999986 4578999999 478889999999
Q ss_pred cCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEEC-C--CCCHHHHHHhhccCCEEE---EEeecCCCCCCccchhHH
Q 023494 137 AGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLN-P--ATSLSAIECVLDVVDLVL---IMSVNPGFGGQSFIESQV 210 (281)
Q Consensus 137 aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~-p--~t~ie~~~~~l~~vD~Il---vmsV~pG~~GQ~f~~~~l 210 (281)
+|||++|+|.+.. ...+.++++.++++|+++|+.+. . .++.+.++++ ...|+++ .|+++||++| ++
T Consensus 79 ~Gad~itvh~~~g-~~~l~~~~~~~~~~g~~~~~~ll~~~t~~~~~~l~~~-~~~~~vl~~a~~~~~~G~~g------~~ 150 (216)
T 1q6o_A 79 ANADWVTVICCAD-INTAKGALDVAKEFNGDVQIELTGYWTWEQAQQWRDA-GIGQVVYHRSRDAQAAGVAW------GE 150 (216)
T ss_dssp TTCSEEEEETTSC-HHHHHHHHHHHHHTTCEEEEEECSCCCHHHHHHHHHT-TCCEEEEECCHHHHHTTCCC------CH
T ss_pred CCCCEEEEeccCC-HHHHHHHHHHHHHcCCCceeeeeeCCChhhHHHHHhc-CcHHHHHHHHHHHHhcCCCC------CH
Confidence 9999999999973 44588999999999999998554 4 3455555543 3467787 7889999988 46
Q ss_pred HHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhcC
Q 023494 211 KKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKR 275 (281)
Q Consensus 211 ~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~~ 275 (281)
++++++|+.++. +++|.|||||+++++.+++++|||++|+||+||+++||.++++++++.++
T Consensus 151 ~~i~~lr~~~~~---~~~i~v~GGI~~~~~~~~~~aGad~ivvG~~I~~a~dp~~~~~~~~~~i~ 212 (216)
T 1q6o_A 151 ADITAIKRLSDM---GFKVTVTGGLALEDLPLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSIA 212 (216)
T ss_dssp HHHHHHHHHHHT---TCEEEEESSCCGGGGGGGTTSCCSEEEESHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCC---CCcEEEECCcChhhHHHHHHcCCCEEEEeehhcCCCCHHHHHHHHHHHHH
Confidence 777888877642 47899999999999999999999999999999999999999999988654
No 13
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=99.98 E-value=7.2e-34 Score=255.66 Aligned_cols=203 Identities=17% Similarity=0.250 Sum_probs=173.7
Q ss_pred EeEEEeccCccCHHHHHHHHHHcC--CCe--EEEEeeeCcccccccCCHHHHHHcCcC-CCCCeeEEEEecChh---hHH
Q 023494 60 VSPSILSANFAKLGEQVKAVELAG--CDW--IHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPE---QRV 131 (281)
Q Consensus 60 i~pSila~D~~~l~~~l~~l~~~G--~d~--iHiDImDG~fvpn~~~G~~~I~~ir~~-t~~~idaHLmv~dp~---~~i 131 (281)
-+||++++|+.+++++++.+++.| ++| +|+|++ ++||+..++.||+. +.+++|+||| ..|. +|+
T Consensus 14 ~~~~ilalD~~~l~~~~~~~~~~~~~v~~~Kv~~d~~-------~~~G~~~v~~lr~~~~~v~lD~kl~-Dip~t~~~~i 85 (245)
T 1eix_A 14 NSPVVVALDYHNRDDALAFVDKIDPRDCRLKVGKEMF-------TLFGPQFVRELQQRGFDIFLDLKFH-DIPNTAAHAV 85 (245)
T ss_dssp CCCEEEEECCSSHHHHHHHHTTSCTTTCEEEEEHHHH-------HHHHHHHHHHHHHTTCCEEEEEEEC-SCHHHHHHHH
T ss_pred CCCeEEEECCCCHHHHHHHHHHhCccCcEEEEcHHHH-------HHhCHHHHHHHHHCCCcEEEEeecc-ccHHHHHHHH
Confidence 479999999999999999999888 899 998874 78999999999997 7789999999 7776 488
Q ss_pred HHHHHcCCCEEEEcccccccccHHHHHHHHHHcCC-cE-EEEECC--CCCHHHHHHh---hccCCEEEEEee-cCCCCCC
Q 023494 132 PDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGA-KA-GVVLNP--ATSLSAIECV---LDVVDLVLIMSV-NPGFGGQ 203 (281)
Q Consensus 132 ~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~-k~-Glai~p--~t~ie~~~~~---l~~vD~IlvmsV-~pG~~GQ 203 (281)
+.+.++|||++|||+|.. ...+.++++.++++|+ ++ ++++++ +++.+.++++ .+..|+|+.|++ .|++++|
T Consensus 86 ~~~~~~Gad~vTvH~~~g-~~~l~~~~~~~~~~G~~~~~~l~v~~~ts~~~~~l~~~~~~~~~~d~Vl~ma~~~~~~G~~ 164 (245)
T 1eix_A 86 AAAADLGVWMVNVHASGG-ARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLD 164 (245)
T ss_dssp HHHHHHTCSEEEEBGGGC-HHHHHHHHHTTGGGGGGCCEEEEECSCTTCCHHHHHTTTCCSCHHHHHHHHHHHHHHTTCS
T ss_pred HHHHhCCCCEEEEeccCC-HHHHHHHHHHHHHcCCCCCcEEEEEecCCCCHHHHHHhccCCCHHHHHHHHHHHHHHcCCC
Confidence 999999999999999973 3448899999999998 66 445555 4455778776 455788999988 7888888
Q ss_pred ccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChh-----------cHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHH
Q 023494 204 SFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPK-----------NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKT 272 (281)
Q Consensus 204 ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e-----------~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~ 272 (281)
.|++...+ ++++|+.+++ ..|.|||||+++ |+++++++|||++|+||+||+++||.++++++++
T Consensus 165 g~V~~~~e-i~~lr~~~~~----~~i~v~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a~dp~~a~~~l~~ 239 (245)
T 1eix_A 165 GVVCSAQE-AVRFKQVFGQ----EFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINA 239 (245)
T ss_dssp EEECCGGG-HHHHHHHHCS----SSEEEECCBCCTTCCCTTCCSCBCHHHHHHTTCSEEEECHHHHTSSSHHHHHHHHHH
T ss_pred eEEeCHHH-HHHHHHhcCC----CCEEEECCcCCCCCCccchhccCCHHHHHHcCCCEEEECHHHcCCCCHHHHHHHHHH
Confidence 89988887 8888888742 468999999999 9999999999999999999999999999999998
Q ss_pred hcCc
Q 023494 273 SKRP 276 (281)
Q Consensus 273 ~~~~ 276 (281)
.+..
T Consensus 240 ~i~~ 243 (245)
T 1eix_A 240 SLQR 243 (245)
T ss_dssp HTC-
T ss_pred HHHh
Confidence 7653
No 14
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=99.98 E-value=1.4e-32 Score=239.82 Aligned_cols=200 Identities=19% Similarity=0.222 Sum_probs=176.2
Q ss_pred EEeccCccCHHHHHHHHHHcCCCeEEEEe-eeCccccc-ccCCHHHHHHcCcC-CCCCeeEEEEecChhhH-HHHHHHcC
Q 023494 63 SILSANFAKLGEQVKAVELAGCDWIHVDV-MDGRFVPN-ITIGPLVVDALRPV-TDLPLDVHLMIVEPEQR-VPDFIKAG 138 (281)
Q Consensus 63 Sila~D~~~l~~~l~~l~~~G~d~iHiDI-mDG~fvpn-~~~G~~~I~~ir~~-t~~~idaHLmv~dp~~~-i~~~~~aG 138 (281)
-++|+|+.+++++++.+++.+ + |+|+ |+|+ |+ +++|++.++++|+. ++.|+++|+|+.++.++ ++.+.++|
T Consensus 3 li~a~D~~~~~~~~~~~~~~~-~--~~diie~G~--p~~~~~g~~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~G 77 (211)
T 3f4w_A 3 LQLALDELTLPEAMVFMDKVV-D--DVDIIEVGT--PFLIREGVNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAG 77 (211)
T ss_dssp EEEEECSCCHHHHHHHHHHHG-G--GCSEEEECH--HHHHHHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTT
T ss_pred EEEEeCCCCHHHHHHHHHHhh-c--CccEEEeCc--HHHHhccHHHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcC
Confidence 378999999999999998874 4 7888 7886 88 79999999999987 78999999999998876 89999999
Q ss_pred CCEEEEcccccccccHHHHHHHHHHcCCcEEEE-ECCCCCHHHHHHhhcc-CCEEEEEeecCCCCCCccchhHHHHHHHH
Q 023494 139 ADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVV-LNPATSLSAIECVLDV-VDLVLIMSVNPGFGGQSFIESQVKKISDL 216 (281)
Q Consensus 139 Ad~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Gla-i~p~t~ie~~~~~l~~-vD~IlvmsV~pG~~GQ~f~~~~l~kI~~l 216 (281)
+|++++|.+.. .+++.++++.++++|+++++. ++|.|+.+.++.+.+. +|+|. ++||++||.+.+..+++++++
T Consensus 78 ad~v~v~~~~~-~~~~~~~~~~~~~~g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~---v~~g~~g~~~~~~~~~~i~~l 153 (211)
T 3f4w_A 78 ADYVTVLGVTD-VLTIQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEAGADMLA---VHTGTDQQAAGRKPIDDLITM 153 (211)
T ss_dssp CSEEEEETTSC-HHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHHTCCEEE---EECCHHHHHTTCCSHHHHHHH
T ss_pred CCEEEEeCCCC-hhHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHcCCCEEE---EcCCCcccccCCCCHHHHHHH
Confidence 99999999852 366789999999999999996 6888888888888775 99874 479999998877678889988
Q ss_pred HHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhcC
Q 023494 217 RRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKR 275 (281)
Q Consensus 217 r~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~~ 275 (281)
++.+. ++++.++|||+++++.++.++|||.+|+||+||+++||.++++++++.++
T Consensus 154 ~~~~~----~~~i~~~gGI~~~~~~~~~~~Gad~vvvGsai~~~~d~~~~~~~l~~~~~ 208 (211)
T 3f4w_A 154 LKVRR----KARIAVAGGISSQTVKDYALLGPDVVIVGSAITHAADPAGEARKISQVLL 208 (211)
T ss_dssp HHHCS----SCEEEEESSCCTTTHHHHHTTCCSEEEECHHHHTCSSHHHHHHHHHHHHH
T ss_pred HHHcC----CCcEEEECCCCHHHHHHHHHcCCCEEEECHHHcCCCCHHHHHHHHHHHHh
Confidence 88753 47899999999999999999999999999999999999999999988765
No 15
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=99.97 E-value=1.3e-31 Score=232.99 Aligned_cols=198 Identities=18% Similarity=0.147 Sum_probs=164.7
Q ss_pred EEEeccCccCHHHHHHHHHHc--CCCeEEEEeeeCcccccccCCHHHHHHcCcCC-CCCeeEEEEecC-hhhHHHHHHHc
Q 023494 62 PSILSANFAKLGEQVKAVELA--GCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIVE-PEQRVPDFIKA 137 (281)
Q Consensus 62 pSila~D~~~l~~~l~~l~~~--G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t-~~~idaHLmv~d-p~~~i~~~~~a 137 (281)
.-++|+|+.+++++++.+++. |++|+|+ +++.| +++|+..+++||+.+ +.++++|+|+.| |..|++.+.++
T Consensus 2 ~li~a~d~~~~~~~~~~~~~~~~~v~~iev--~~~~~---~~~g~~~i~~l~~~~~~~~i~~~l~~~di~~~~~~~a~~~ 76 (207)
T 3ajx_A 2 KLQVAIDLLSTEAALELAGKVAEYVDIIEL--GTPLI---KAEGLSVITAVKKAHPDKIVFADMKTMDAGELEADIAFKA 76 (207)
T ss_dssp EEEEEECCSCHHHHHHHHHHHGGGCSEEEE--CHHHH---HHHCTHHHHHHHHHSTTSEEEEEEEECSCHHHHHHHHHHT
T ss_pred eEEEEeCCCCHHHHHHHHHHhhccCCEEEE--CcHHH---HhhCHHHHHHHHHhCCCCeEEEEEEecCccHHHHHHHHhC
Confidence 458999999999999888754 4688655 77654 679999999999875 789999999999 88889999999
Q ss_pred CCCEEEEcccccccccHHHHHHHHHHcCCcEEEEEC-CCCCHHHHHHhhc-cCCEE-EEEeecCCCCCCccchhHHHHHH
Q 023494 138 GADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLN-PATSLSAIECVLD-VVDLV-LIMSVNPGFGGQSFIESQVKKIS 214 (281)
Q Consensus 138 GAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~-p~t~ie~~~~~l~-~vD~I-lvmsV~pG~~GQ~f~~~~l~kI~ 214 (281)
|||++++|.+.. .+++.++++.++++|+++|+++. ++||-+.++.+.+ .+|+| +.|++.|++.|+++.+ ++|+
T Consensus 77 Gad~v~vh~~~~-~~~~~~~~~~~~~~g~~~gv~~~s~~~p~~~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~---~~i~ 152 (207)
T 3ajx_A 77 GADLVTVLGSAD-DSTIAGAVKAAQAHNKGVVVDLIGIEDKATRAQEVRALGAKFVEMHAGLDEQAKPGFDLN---GLLA 152 (207)
T ss_dssp TCSEEEEETTSC-HHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHTTCSEEEEECCHHHHTSTTCCTH---HHHH
T ss_pred CCCEEEEeccCC-hHHHHHHHHHHHHcCCceEEEEecCCChHHHHHHHHHhCCCEEEEEecccccccCCCchH---HHHH
Confidence 999999999862 36788899999999999999763 3344443444322 48999 8888888888888765 7777
Q ss_pred HHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhc
Q 023494 215 DLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSK 274 (281)
Q Consensus 215 ~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~ 274 (281)
+++.. ++++.++|||+++|+.+++++|||++|+||+||+++||.++++++++.+
T Consensus 153 ~~~~~------~~pi~v~GGI~~~~~~~~~~aGad~vvvGsaI~~~~dp~~~~~~~~~~~ 206 (207)
T 3ajx_A 153 AGEKA------RVPFSVAGGVKVATIPAVQKAGAEVAVAGGAIYGAADPAAAAKELRAAI 206 (207)
T ss_dssp HHHHH------TSCEEEESSCCGGGHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHTC
T ss_pred HhhCC------CCCEEEECCcCHHHHHHHHHcCCCEEEEeeeccCCCCHHHHHHHHHHHh
Confidence 77654 3689999999999999999999999999999999999999999998764
No 16
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=99.97 E-value=6.6e-33 Score=249.42 Aligned_cols=201 Identities=17% Similarity=0.235 Sum_probs=173.2
Q ss_pred eEEEeccCccCHHHHHHHHHHcC--CCe--EEEEeeeCcccccccCCHHHHHHcCcC-CCCCeeEEEEecChhh---HHH
Q 023494 61 SPSILSANFAKLGEQVKAVELAG--CDW--IHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQ---RVP 132 (281)
Q Consensus 61 ~pSila~D~~~l~~~l~~l~~~G--~d~--iHiDImDG~fvpn~~~G~~~I~~ir~~-t~~~idaHLmv~dp~~---~i~ 132 (281)
++|++|+|+.+++++++.+++.| ++| +|+|++ ++||+..++.||+. +.+++|+||| ..|.. |++
T Consensus 5 ~~lilalD~~~l~~~~~~v~~~~~~v~~~Kv~~d~~-------~~~G~~~v~~lr~~~~~v~lD~kl~-Dip~t~~~~~~ 76 (246)
T 2yyu_A 5 TPFIVALDFPSKQEVERFLRPFAGTPLFVKVGMELY-------YQEGPAIVAFLKEQGHAVFLDLKLH-DIPNTVKQAMK 76 (246)
T ss_dssp CCEEEECCCSSHHHHHHHHGGGTTSCCEEEECHHHH-------HHHTHHHHHHHHHTTCEEEEEEEEC-SCHHHHHHHHH
T ss_pred CCeEEEeCCCCHHHHHHHHHHhcccccEEEeCHHHH-------HHhCHHHHHHHHHCCCeEEEEeecc-cchHHHHHHHH
Confidence 58999999999999999999887 589 788764 78999999999997 6789999999 77766 889
Q ss_pred HHHHcCCCEEEEcccccccccHHHHHHHHHH---cCCcE--EEEECCCCCH--HHH-HHh---hccCCEEEEEeec-CCC
Q 023494 133 DFIKAGADIVSVHCEQSSTIHLHRTLNQIKD---LGAKA--GVVLNPATSL--SAI-ECV---LDVVDLVLIMSVN-PGF 200 (281)
Q Consensus 133 ~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~---~G~k~--Glai~p~t~i--e~~-~~~---l~~vD~IlvmsV~-pG~ 200 (281)
.+.++|||++|||.|.. ...+.++++.+++ +|++. +++++|.|+. +.+ +++ .+..|+|+.|+++ |++
T Consensus 77 ~~~~~Gad~vTvH~~~g-~~~l~~~~~~~~~~~~~G~~~~~~lav~~~Ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~ 155 (246)
T 2yyu_A 77 GLARVGADLVNVHAAGG-RRMMEAAIEGLDAGTPSGRMRPRCIAVTQLTSTDERMLHEELWISRPLVETVAHYAALAKES 155 (246)
T ss_dssp HHHHTTCSEEEEEGGGC-HHHHHHHHHHHHHHSCSSSCCCEEEEESSCTTCCHHHHHHTSCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCEEEEECCCC-HHHHHHHHHHHHhhcccCCcCCCEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 99999999999999973 3347899999999 78663 5789999985 667 665 4557889999886 788
Q ss_pred CCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChh-----------cHHHHHHcCCcEEEEcccccCCCCHHHHHHH
Q 023494 201 GGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPK-----------NAYKVIEAGANALVAGSAVFGAKDYAEAIKG 269 (281)
Q Consensus 201 ~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e-----------~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~ 269 (281)
++|.|++...+ ++++|+.++ ..+ |.|||||+++ |+.+++++|||++|+||+||+++||.+++++
T Consensus 156 G~~g~V~~~~e-i~~lr~~~~---~~~-i~V~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a~dp~~a~~~ 230 (246)
T 2yyu_A 156 GLDGVVCSANE-AAFIKERCG---ASF-LAVTPGIRFADDAAHDQVRVVTPRKARALGSDYIVIGRSLTRAADPLRTYAR 230 (246)
T ss_dssp TCCEEECCHHH-HHHHHHHHC---TTS-EEEECCCCCCC-------CCCCHHHHHHHTCSEEEECHHHHTSSSHHHHHHH
T ss_pred CCCEEEeCHHH-HHHHHHhcC---CCC-EEEeCCcCCCCCCcccccccCCHHHHHHcCCCEEEECHhhcCCCCHHHHHHH
Confidence 88889988887 888888764 234 8999999999 9999999999999999999999999999999
Q ss_pred HHHhcC
Q 023494 270 IKTSKR 275 (281)
Q Consensus 270 l~~~~~ 275 (281)
+++.+.
T Consensus 231 l~~~i~ 236 (246)
T 2yyu_A 231 LQHEWN 236 (246)
T ss_dssp HHHHCC
T ss_pred HHHHHH
Confidence 998765
No 17
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=99.97 E-value=3.1e-31 Score=236.90 Aligned_cols=205 Identities=18% Similarity=0.258 Sum_probs=174.4
Q ss_pred CCceEeEEEeccCcc--CHHHHHHHHHHcCCCeEEEE------eeeCcccc-----------cccCCHHHHHHcCcCCCC
Q 023494 56 SDIIVSPSILSANFA--KLGEQVKAVELAGCDWIHVD------VMDGRFVP-----------NITIGPLVVDALRPVTDL 116 (281)
Q Consensus 56 ~~~~i~pSila~D~~--~l~~~l~~l~~~G~d~iHiD------ImDG~fvp-----------n~~~G~~~I~~ir~~t~~ 116 (281)
++..|+|||+++|+. ++.+.++.++++ +|+||+| +|||+|++ |+.++.+.++++|+.+++
T Consensus 3 ~~~~~~~~i~~~~~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~~ 81 (248)
T 1geq_A 3 KDGSLIPYLTAGDPDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSST 81 (248)
T ss_dssp CTTEEEEEEETTSSCHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCC
T ss_pred CCccEEEEEeCCCCCHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCCC
Confidence 345799999999996 888999999999 9999999 99999999 888999999999988765
Q ss_pred CeeEEEEe-cCh------hhHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCC
Q 023494 117 PLDVHLMI-VEP------EQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVD 189 (281)
Q Consensus 117 ~idaHLmv-~dp------~~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD 189 (281)
| +|+|+ .|| .++++.+.++|||+|++|.+. .+++.++++.++++|.++++.++|.|+.+.++.+...+|
T Consensus 82 p--v~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~~--~~~~~~~~~~~~~~g~~~~~~i~~~t~~e~~~~~~~~~d 157 (248)
T 1geq_A 82 P--IVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLP--VFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTT 157 (248)
T ss_dssp C--EEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTCC--GGGHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHHHCS
T ss_pred C--EEEEeccchhhhcCHHHHHHHHHHCCCCEEEECCCC--hhhHHHHHHHHHHhCCCeEEEECCCCHHHHHHHHHhcCC
Confidence 4 88899 488 789999999999999999885 567899999999999999999999999999999888888
Q ss_pred -EEEEEeecCCCCCCc--cchhHHHHHHHHHHHhhhcCCCCeEEEecCCCh-hcHHHHHHcCCcEEEEcccccCCC--CH
Q 023494 190 -LVLIMSVNPGFGGQS--FIESQVKKISDLRRMCLEKGVNPWIEVDGGVGP-KNAYKVIEAGANALVAGSAVFGAK--DY 263 (281)
Q Consensus 190 -~IlvmsV~pG~~GQ~--f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~-e~i~~~~~aGAD~~VvGSaIf~a~--dp 263 (281)
+|.+|++ ||++|++ +.+..+++++++++.. +++|.++|||+. +++.++.++|||.+|+||+||++. ++
T Consensus 158 ~~i~~~~~-~G~~g~~~~~~~~~~~~i~~l~~~~-----~~pi~~~GGI~~~e~i~~~~~~Gad~vivGsai~~~~~~~~ 231 (248)
T 1geq_A 158 GFVYLVSL-YGTTGAREEIPKTAYDLLRRAKRIC-----RNKVAVGFGVSKREHVVSLLKEGANGVVVGSALVKIIGEKG 231 (248)
T ss_dssp SEEEEECC-C-------CCCHHHHHHHHHHHHHC-----SSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHG
T ss_pred CeEEEEEC-CccCCCCCCCChhHHHHHHHHHhhc-----CCCEEEEeecCCHHHHHHHHHcCCCEEEEcHHHHhhHhhCh
Confidence 9989999 9988876 7788899999998875 378999999997 999999999999999999999752 33
Q ss_pred HHHHHHHHH
Q 023494 264 AEAIKGIKT 272 (281)
Q Consensus 264 ~~~~~~l~~ 272 (281)
++++++.+
T Consensus 232 -~~~~~~~~ 239 (248)
T 1geq_A 232 -REATEFLK 239 (248)
T ss_dssp -GGCHHHHH
T ss_pred -HHHHHHHH
Confidence 44444443
No 18
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=99.97 E-value=2.8e-30 Score=234.87 Aligned_cols=194 Identities=15% Similarity=0.136 Sum_probs=169.7
Q ss_pred CceEeEEEeccCc--cCHHHHHHHHHHcCCCeEEEEe------eeCccccc-----------ccCCHHHHHHcCcC-CCC
Q 023494 57 DIIVSPSILSANF--AKLGEQVKAVELAGCDWIHVDV------MDGRFVPN-----------ITIGPLVVDALRPV-TDL 116 (281)
Q Consensus 57 ~~~i~pSila~D~--~~l~~~l~~l~~~G~d~iHiDI------mDG~fvpn-----------~~~G~~~I~~ir~~-t~~ 116 (281)
+..+.|+|+++|+ .++.+.++.+.++|+|+||+|+ |||+|+++ +.++++.++++|+. ++.
T Consensus 16 ~~~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~ 95 (268)
T 1qop_A 16 EGAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTI 95 (268)
T ss_dssp CCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSS
T ss_pred CceEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCC
Confidence 4579999999999 6777889999999999999999 99999996 56677999999987 777
Q ss_pred CeeEEEEe-cCh------hhHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCC
Q 023494 117 PLDVHLMI-VEP------EQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVD 189 (281)
Q Consensus 117 ~idaHLmv-~dp------~~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD 189 (281)
| +|+|+ .|| .+|++.+.++|+|++++|.+. .+++.++++.++++|++.+..++|.|+.++++.+....+
T Consensus 96 P--v~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~d~~--~e~~~~~~~~~~~~g~~~i~l~~p~t~~~~i~~i~~~~~ 171 (268)
T 1qop_A 96 P--IGLLMYANLVFNNGIDAFYARCEQVGVDSVLVADVP--VEESAPFRQAALRHNIAPIFICPPNADDDLLRQVASYGR 171 (268)
T ss_dssp C--EEEEECHHHHHTTCHHHHHHHHHHHTCCEEEETTCC--GGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCC
T ss_pred C--EEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEcCCC--HHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHhhCC
Confidence 7 77787 577 678999999999999999884 577899999999999999999999999999999887655
Q ss_pred -EEEEEeecCCCCCC--ccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCC
Q 023494 190 -LVLIMSVNPGFGGQ--SFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGA 260 (281)
Q Consensus 190 -~IlvmsV~pG~~GQ--~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a 260 (281)
++++|++. |++|| ++.+...++|+++|+.. +.+|.|+|||+ ++++.+++.+|||++|+||+|++.
T Consensus 172 g~v~~~s~~-G~tG~~~~~~~~~~~~i~~lr~~~-----~~pi~vggGI~t~e~~~~~~~agAD~vVVGSai~~~ 240 (268)
T 1qop_A 172 GYTYLLSRS-GVTGAENRGALPLHHLIEKLKEYH-----AAPALQGFGISSPEQVSAAVRAGAAGAISGSAIVKI 240 (268)
T ss_dssp SCEEEESSS-SCCCSSSCC--CCHHHHHHHHHTT-----CCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHH
T ss_pred CcEEEEecC-CcCCCccCCCchHHHHHHHHHhcc-----CCcEEEECCCCCHHHHHHHHHcCCCEEEEChHHhhh
Confidence 88888887 99998 67788889999998864 47899999999 999999999999999999999864
No 19
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=99.97 E-value=4.4e-32 Score=242.94 Aligned_cols=200 Identities=20% Similarity=0.291 Sum_probs=168.4
Q ss_pred EEEeccCccCHHHHHHHHHHcC--CCe--EEEEeeeCcccccccCCHHHHHHcCcC-CCCCeeEEEEecChh---hHHHH
Q 023494 62 PSILSANFAKLGEQVKAVELAG--CDW--IHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPE---QRVPD 133 (281)
Q Consensus 62 pSila~D~~~l~~~l~~l~~~G--~d~--iHiDImDG~fvpn~~~G~~~I~~ir~~-t~~~idaHLmv~dp~---~~i~~ 133 (281)
+.++|+|+.+++++++.+++.| ++| +|+|++ ++||+..++.||+. +.+++|+||| ..|. +|++.
T Consensus 5 ~lilalD~~~l~~~~~~~~~~~~~v~~~Kv~~d~~-------~~~G~~~v~~l~~~~~~v~lD~kl~-Dip~t~~~~~~~ 76 (239)
T 1dbt_A 5 LPIIALDFASAEETLAFLAPFQQEPLFVKVGMELF-------YQEGPSIVKQLKERNCELFLDLKLH-DIPTTVNKAMKR 76 (239)
T ss_dssp SCEEECCCSSHHHHHHHTGGGTTSCCEEEECHHHH-------HHHTHHHHHHHHHTTCEEEEEEEEC-SCHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHhcccCcEEEECHHHH-------HHhCHHHHHHHHHCCCcEEEEeccc-cchHHHHHHHHH
Confidence 4689999999999999999887 599 888874 78999999999997 6789999999 7776 48889
Q ss_pred HHHcCCCEEEEcccccccccHHHHHHHHHHc---CCc----EEEEECCCCCHHHH-HHh-h--ccCCEEEEEeec-CCCC
Q 023494 134 FIKAGADIVSVHCEQSSTIHLHRTLNQIKDL---GAK----AGVVLNPATSLSAI-ECV-L--DVVDLVLIMSVN-PGFG 201 (281)
Q Consensus 134 ~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~---G~k----~Glai~p~t~ie~~-~~~-l--~~vD~IlvmsV~-pG~~ 201 (281)
+.++|||++|||.|.. ...+.++++.++++ |++ +++.++++++.+.+ +++ + +..|+|+.|+++ |+++
T Consensus 77 ~~~~Gad~vtvH~~~g-~~~l~~~~~~~~~~~~~g~~~~~~~~V~~~ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G 155 (239)
T 1dbt_A 77 LASLGVDLVNVHAAGG-KKMMQAALEGLEEGTPAGKKRPSLIAVTQLTSTSEQIMKDELLIEKSLIDTVVHYSKQAEESG 155 (239)
T ss_dssp HHTTTCSEEEEEGGGC-HHHHHHHHHHHHHHSCTTSCCCEEEEECSCTTCCHHHHHHTSCBCSCHHHHHHHHHHHHHHTT
T ss_pred HHhcCCCEEEEeCcCC-HHHHHHHHHHHHhhhccCCCCccEEEEEEcCCCCHHHHHHHhccCCCHHHHHHHHHHHHHHhC
Confidence 9999999999999973 33368999999998 986 55556666666777 765 5 447889999885 7888
Q ss_pred CCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcH-----------HHHHHcCCcEEEEcccccCCCCHHHHHHHH
Q 023494 202 GQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNA-----------YKVIEAGANALVAGSAVFGAKDYAEAIKGI 270 (281)
Q Consensus 202 GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i-----------~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l 270 (281)
+|.|++.. ++++++|+.++ +..|.|||||++++. .+++++|||++|+||+||+++||.++++++
T Consensus 156 ~~g~v~~~-~~i~~lr~~~~----~~~i~v~gGI~~~~~~~~dq~rv~tp~~a~~aGad~iVvGr~I~~a~dp~~a~~~l 230 (239)
T 1dbt_A 156 LDGVVCSV-HEAKAIYQAVS----PSFLTVTPGIRMSEDAANDQVRVATPAIAREKGSSAIVVGRSITKAEDPVKAYKAV 230 (239)
T ss_dssp CSEEECCG-GGHHHHTTTSC----TTCEEEECCBCCTTSCCTTCSSCBCHHHHHHTTCSEEEECHHHHTSSCHHHHHHHH
T ss_pred CCEEEECH-HHHHHHHHhcC----CCcEEEeCCcCCCCCCccceeccCCHHHHHHcCCCEEEEChhhcCCCCHHHHHHHH
Confidence 88898777 78888887652 246899999999998 899999999999999999999999999999
Q ss_pred HHhcC
Q 023494 271 KTSKR 275 (281)
Q Consensus 271 ~~~~~ 275 (281)
++.+.
T Consensus 231 ~~~i~ 235 (239)
T 1dbt_A 231 RLEWE 235 (239)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88654
No 20
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=99.97 E-value=2e-30 Score=230.06 Aligned_cols=204 Identities=16% Similarity=0.205 Sum_probs=165.3
Q ss_pred eEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcC-CC--CCeeEEEEecChhhHHHHHHHc
Q 023494 61 SPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TD--LPLDVHLMIVEPEQRVPDFIKA 137 (281)
Q Consensus 61 ~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~-t~--~~idaHLmv~dp~~~i~~~~~a 137 (281)
++-++|+|+.+++++++.+++.|....++.|+++.| +++|++.|++||+. ++ +++|+||| ..|..+.+.++++
T Consensus 6 ~~livAlD~~~~~~a~~~~~~~~~~~~~ikvg~~lf---~~~G~~~v~~l~~~~p~~~iflDlKl~-Dip~t~~~~~~~~ 81 (221)
T 3exr_A 6 PNLQVALDHSNLKGAITAAVSVGNEVDVIEAGTVCL---LQVGSELVEVLRSLFPDKIIVADTKCA-DAGGTVAKNNAVR 81 (221)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHGGGCSEEEECHHHH---HHHCTHHHHHHHHHCTTSEEEEEEEEC-SCHHHHHHHHHTT
T ss_pred CCEEEEeCCCCHHHHHHHHHhhCCCceEEEECHHHH---HhcCHHHHHHHHHhCCCCcEEEEEEee-ccHHHHHHHHHHc
Confidence 345899999999999999998773333455688766 68999999999875 34 67888888 7787788889999
Q ss_pred CCCEEEEcccccccccHHHHHHHHHHcC---CcEEEEECCCCCHHHHHHhhc-cCCE-EEEEeecCCCCCCccchhHHHH
Q 023494 138 GADIVSVHCEQSSTIHLHRTLNQIKDLG---AKAGVVLNPATSLSAIECVLD-VVDL-VLIMSVNPGFGGQSFIESQVKK 212 (281)
Q Consensus 138 GAd~Itvh~Ea~~~~~i~~~l~~ik~~G---~k~Glai~p~t~ie~~~~~l~-~vD~-IlvmsV~pG~~GQ~f~~~~l~k 212 (281)
|||++|||++.. ...++++++.+++.| +++|++++++|+.+.++++++ .+|+ ++.|+..++.+|+... .++
T Consensus 82 Gad~vtVH~~~g-~~~l~~a~~~~~~~g~~~~~~~Vt~lts~~~~~~~~~~~~~~~~~v~~~a~~~~~~Gvv~s---~~e 157 (221)
T 3exr_A 82 GADWMTCICSAT-IPTMKAARKAIEDINPDKGEIQVELYGDWTYDQAQQWLDAGISQAIYHQSRDALLAGETWG---EKD 157 (221)
T ss_dssp TCSEEEEETTSC-HHHHHHHHHHHHHHCTTTCEEEEECCSSCCHHHHHHHHHTTCCEEEEECCHHHHHHTCCCC---HHH
T ss_pred CCCEEEEeccCC-HHHHHHHHHHHHhcCCCcceEEEEEcCCCCHHHHHHHHcCCHHHHHHHHHHhcCCCccccC---HHH
Confidence 999999999973 566899999999988 899999999999999888876 5655 4445566665665433 344
Q ss_pred HHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhcC
Q 023494 213 ISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKR 275 (281)
Q Consensus 213 I~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~~ 275 (281)
++.+|+.+.. +++|+|||||++++++.+.++|||++|+||+||+++||.++++++++.++
T Consensus 158 ~~~ir~~~~~---~~~i~v~gGI~~~~~~~~~~aGad~~VvG~~I~~a~dp~~a~~~~~~~~~ 217 (221)
T 3exr_A 158 LNKVKKLIEM---GFRVSVTGGLSVDTLKLFEGVDVFTFIAGRGITEAKNPAGAARAFKDEIK 217 (221)
T ss_dssp HHHHHHHHHH---TCEEEEESSCCGGGGGGGTTCCCSEEEECHHHHTSSSHHHHHHHHHHHHH
T ss_pred HHHHHHhhcC---CceEEEECCCCHHHHHHHHHCCCCEEEECchhhCCCCHHHHHHHHHHHHH
Confidence 5555555432 57899999999999999999999999999999999999999999988664
No 21
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=99.95 E-value=1.9e-27 Score=214.86 Aligned_cols=206 Identities=17% Similarity=0.280 Sum_probs=171.1
Q ss_pred CceEeEEEeccCc--cCHHHHHHHHHHcCCCeEEEE------eeeCcccc-----------cccCCHHHHHHcCcCCCCC
Q 023494 57 DIIVSPSILSANF--AKLGEQVKAVELAGCDWIHVD------VMDGRFVP-----------NITIGPLVVDALRPVTDLP 117 (281)
Q Consensus 57 ~~~i~pSila~D~--~~l~~~l~~l~~~G~d~iHiD------ImDG~fvp-----------n~~~G~~~I~~ir~~t~~~ 117 (281)
+..+.|++++.|+ .++.+.++.++++|+|+||+| +|||+|++ +..++.+.++++|+.++.|
T Consensus 17 ~~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~~P 96 (262)
T 1rd5_A 17 KTAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCP 96 (262)
T ss_dssp CCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCSSC
T ss_pred CceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCC
Confidence 4468999999999 567788889999999999999 69999988 5566788999999887777
Q ss_pred eeEEEEe-cChhh--HHHHHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhcc-CCEEEE
Q 023494 118 LDVHLMI-VEPEQ--RVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV-VDLVLI 193 (281)
Q Consensus 118 idaHLmv-~dp~~--~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~-vD~Ilv 193 (281)
+|+|+ .||.. .++.+.++|+|++++|.+. .+++.++++.++++|++..+.++|.|+.+.++.+... .+++++
T Consensus 97 --v~~m~~~~~~~~~~~~~a~~aGadgv~v~d~~--~~~~~~~~~~~~~~g~~~i~~~a~~t~~e~~~~~~~~~~g~v~~ 172 (262)
T 1rd5_A 97 --VVLLSYYKPIMFRSLAKMKEAGVHGLIVPDLP--YVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEGFVYL 172 (262)
T ss_dssp --EEEECCSHHHHSCCTHHHHHTTCCEEECTTCB--TTTHHHHHHHHHHTTCEECEEECTTSCHHHHHHHHHHCCSCEEE
T ss_pred --EEEEecCcHHHHHHHHHHHHcCCCEEEEcCCC--hhhHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHhcCCCeEEE
Confidence 56686 46642 3566999999999999774 5779999999999999999999999999988887665 458999
Q ss_pred EeecCCCCCC--ccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCC----CCHHHH
Q 023494 194 MSVNPGFGGQ--SFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGA----KDYAEA 266 (281)
Q Consensus 194 msV~pG~~GQ--~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a----~dp~~~ 266 (281)
+++ +|++|+ .+.+..+++++++++.. +++|.++|||+ ++++.++.++|||.+|+||+|++. .++.+.
T Consensus 173 ~s~-~G~tG~~~~~~~~~~~~i~~v~~~~-----~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGSai~~~~~~~~~~~~~ 246 (262)
T 1rd5_A 173 VSV-NGVTGPRANVNPRVESLIQEVKKVT-----NKPVAVGFGISKPEHVKQIAQWGADGVIIGSAMVRQLGEAASPKQG 246 (262)
T ss_dssp ECS-SCCBCTTSCBCTHHHHHHHHHHHHC-----SSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHHHHHSSSSHHHH
T ss_pred ecC-CCCCCCCcCCCchHHHHHHHHHhhc-----CCeEEEECCcCCHHHHHHHHHcCCCEEEEChHHHhHHHhccChhHH
Confidence 887 898887 67788888999998864 47899999999 999999999999999999999964 355544
Q ss_pred HHHHHH
Q 023494 267 IKGIKT 272 (281)
Q Consensus 267 ~~~l~~ 272 (281)
.+++++
T Consensus 247 ~~~~~~ 252 (262)
T 1rd5_A 247 LRRLEE 252 (262)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444444
No 22
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=99.94 E-value=4.1e-27 Score=214.31 Aligned_cols=209 Identities=17% Similarity=0.190 Sum_probs=171.5
Q ss_pred CceEeEEEeccCc--cCHHHHHHHHHHcCCCeEEEE------eeeCccccccc-----CC------HHHHHHcCcC-CCC
Q 023494 57 DIIVSPSILSANF--AKLGEQVKAVELAGCDWIHVD------VMDGRFVPNIT-----IG------PLVVDALRPV-TDL 116 (281)
Q Consensus 57 ~~~i~pSila~D~--~~l~~~l~~l~~~G~d~iHiD------ImDG~fvpn~~-----~G------~~~I~~ir~~-t~~ 116 (281)
+..+.|+|+++|+ ....+.++.|+++|+|+||++ ++||+++++.+ .| +++++++|+. ++.
T Consensus 17 ~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~ 96 (267)
T 3vnd_A 17 KGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDM 96 (267)
T ss_dssp CCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTC
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCC
Confidence 4579999999999 578888999999999999999 99999998754 66 7889999975 677
Q ss_pred CeeEEEEec-Ch------hhHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccC-
Q 023494 117 PLDVHLMIV-EP------EQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVV- 188 (281)
Q Consensus 117 ~idaHLmv~-dp------~~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~v- 188 (281)
| +|||+. || ++|++.+.++|+|++++|.. +.++..++++.++++|++....++|.|+.++++.+.+..
T Consensus 97 P--ivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dl--p~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~~~ 172 (267)
T 3vnd_A 97 P--IGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADV--PVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQGE 172 (267)
T ss_dssp C--EEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTS--CGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCC
T ss_pred C--EEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCC--CHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCC
Confidence 7 667986 88 67899999999999999988 467789999999999999999999999999999998876
Q ss_pred CEEEEEeecCCCCCCc-cchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCC-----C
Q 023494 189 DLVLIMSVNPGFGGQS-FIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGA-----K 261 (281)
Q Consensus 189 D~IlvmsV~pG~~GQ~-f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a-----~ 261 (281)
++|.++++.+.++.+. +.+...+.++++|+.. +.++.|+|||+ ++++++.+++|||++|+||+|++. +
T Consensus 173 gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~-----~~pv~vGfGI~~~e~~~~~~~~gADgvVVGSaiv~~i~~~~~ 247 (267)
T 3vnd_A 173 GYTYLLSRAGVTGTESKAGEPIENILTQLAEFN-----APPPLLGFGIAEPEQVRAAIKAGAAGAISGSAVVKIIEAHQH 247 (267)
T ss_dssp SCEEESCCCCCC--------CHHHHHHHHHTTT-----CCCEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHTSS
T ss_pred CcEEEEecCCCCCCccCCcHHHHHHHHHHHHhc-----CCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHHHHHHHhcc
Confidence 5888888886666554 6666778888888763 46899999996 999998899999999999999862 2
Q ss_pred CHHHHHHHHHHhc
Q 023494 262 DYAEAIKGIKTSK 274 (281)
Q Consensus 262 dp~~~~~~l~~~~ 274 (281)
++.+..+.+++.+
T Consensus 248 ~~~~~~~~~~~~~ 260 (267)
T 3vnd_A 248 DEATLLAKLAEFT 260 (267)
T ss_dssp CHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHH
Confidence 4555555555443
No 23
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=99.90 E-value=2.7e-24 Score=191.46 Aligned_cols=202 Identities=19% Similarity=0.238 Sum_probs=145.2
Q ss_pred EEEeccCccCHHHHHHHHHHcC--CCeEEEEeeeCcccccccCCHHHHHHcCcC--CCCCeeEEEEecCh---hhHHHHH
Q 023494 62 PSILSANFAKLGEQVKAVELAG--CDWIHVDVMDGRFVPNITIGPLVVDALRPV--TDLPLDVHLMIVEP---EQRVPDF 134 (281)
Q Consensus 62 pSila~D~~~l~~~l~~l~~~G--~d~iHiDImDG~fvpn~~~G~~~I~~ir~~--t~~~idaHLmv~dp---~~~i~~~ 134 (281)
+-++|+|+.+++++++.+++.+ ++|+|++ ++.| +++|+..+++||+. +.+++|+|+| .-| ..|++.+
T Consensus 14 ~lilAlD~~~~~~a~~~v~~~~~~v~~~Kvg--~~lf---~~~G~~~v~~l~~~~g~~v~lD~Kl~-DipnTv~~~~~~~ 87 (228)
T 3m47_A 14 RLILAMDLMNRDDALRVTGEVREYIDTVKIG--YPLV---LSEGMDIIAEFRKRFGCRIIADFKVA-DIPETNEKICRAT 87 (228)
T ss_dssp GEEEECCCCSHHHHHHHHHTTTTTCSEEEEE--HHHH---HHHCTHHHHHHHHHHCCEEEEEEEEC-SCHHHHHHHHHHH
T ss_pred CeEEEeCCCCHHHHHHHHHHcCCcccEEEEc--HHHH---HhcCHHHHHHHHhcCCCeEEEEEeec-ccHhHHHHHHHHH
Confidence 4589999999999999999877 8999994 3544 58999999999984 5578888888 333 4589999
Q ss_pred HHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCCEEEEEeecCCCCCCccchhHHHHHH
Q 023494 135 IKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKIS 214 (281)
Q Consensus 135 ~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~~~~l~kI~ 214 (281)
+++|||++|+|.+.. .+.++.+++.+++.|.++-+ +.+.++.+....+.+.++.+..|+.++|..|.-......+.++
T Consensus 88 ~~~gad~vtvh~~~G-~~~l~~~~~~~~~~g~~v~v-Lt~~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~~at~~~e~~ 165 (228)
T 3m47_A 88 FKAGADAIIVHGFPG-ADSVRACLNVAEEMGREVFL-LTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTRPERLS 165 (228)
T ss_dssp HHTTCSEEEEESTTC-HHHHHHHHHHHHHHTCEEEE-ECCCCSGGGGTTHHHHHHHHHHHHHHTTCCEEECCSSCHHHHH
T ss_pred HhCCCCEEEEeccCC-HHHHHHHHHHHHhcCCCeEE-EEeCCCccHHHHHHHHHHHHHHHHHHhCCcEEEECCCChHHHH
Confidence 999999999999973 56688999999998876443 3434443211111122344455677888877433322245666
Q ss_pred HHHHHhhhcCCCCeEEEecCCChh--cHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhcCc
Q 023494 215 DLRRMCLEKGVNPWIEVDGGVGPK--NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRP 276 (281)
Q Consensus 215 ~lr~l~~~~~~~~~I~VDGGI~~e--~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~~~ 276 (281)
++|+..+ .++.+ |++||+++ +. +++++|+|++|+||+||+++||.++++++++.++.
T Consensus 166 ~ir~~~~---~~~~i-v~PGI~~~g~~p-~~~~aGad~iVvGr~I~~a~dp~~a~~~~~~~~~~ 224 (228)
T 3m47_A 166 RLREIIG---QDSFL-ISPGVGAQGGDP-GETLRFADAIIVGRSIYLADNPAAAAAGAIESIKD 224 (228)
T ss_dssp HHHHHHC---SSSEE-EECC----------CGGGTCSEEEECHHHHTSSCHHHHHHHHHHHC--
T ss_pred HHHHhcC---CCCEE-EecCcCcCCCCH-hHHHcCCCEEEECHHHhCCCCHHHHHHHHHHHHHH
Confidence 6776653 24667 99999987 78 88999999999999999999999999999998764
No 24
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=99.88 E-value=1.3e-22 Score=180.46 Aligned_cols=187 Identities=14% Similarity=0.185 Sum_probs=148.0
Q ss_pred CHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEcccccc
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSS 150 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~~ 150 (281)
+..+..+.++++|+|++|++.+|++|.++..+ +.++++++.++.|+.+|.++.+|++ ++.+.++|||.|++|.+.
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~--~~i~~i~~~~~ipv~v~ggI~~~~~-~~~~l~~Gad~V~lg~~~-- 107 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTGDNR--ALIAEVAQAMDIKVELSGGIRDDDT-LAAALATGCTRVNLGTAA-- 107 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSCCCH--HHHHHHHHHCSSEEEEESSCCSHHH-HHHHHHTTCSEEEECHHH--
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCCChH--HHHHHHHHhcCCcEEEECCcCCHHH-HHHHHHcCCCEEEECchH--
Confidence 55666788889999999999999999988877 8899999888899999999999985 888999999999999985
Q ss_pred cccHHHHHHHHHHcCCcEEEEECCC--------------CCHHHHHHhhcc-CCEEEEEeecCCCCCCccchhHHHHHHH
Q 023494 151 TIHLHRTLNQIKDLGAKAGVVLNPA--------------TSLSAIECVLDV-VDLVLIMSVNPGFGGQSFIESQVKKISD 215 (281)
Q Consensus 151 ~~~i~~~l~~ik~~G~k~Glai~p~--------------t~ie~~~~~l~~-vD~IlvmsV~pG~~GQ~f~~~~l~kI~~ 215 (281)
..++..+.+.+++.|.++++.+++. ++.+.++++.+. +|.|+++++.++..+|.+..+.++++
T Consensus 108 l~~p~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~~~~~i-- 185 (244)
T 1vzw_A 108 LETPEWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEGCARYVVTDIAKDGTLQGPNLELLKNV-- 185 (244)
T ss_dssp HHCHHHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHTTCCCEEEEEC-------CCCHHHHHHH--
T ss_pred hhCHHHHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhCCCCEEEEeccCcccccCCCCHHHHHHH--
Confidence 4567777888888888888777765 667777777665 99999999999877777755555444
Q ss_pred HHHHhhhcCCCCeEEEecCCC-hhcHHHHHHc---CCcEEEEcccccCCC-CHHHHHHHH
Q 023494 216 LRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEA---GANALVAGSAVFGAK-DYAEAIKGI 270 (281)
Q Consensus 216 lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~a---GAD~~VvGSaIf~a~-dp~~~~~~l 270 (281)
++. .+++|.++|||+ ++++.++.++ |||.+++||+++..+ ++.+..+.+
T Consensus 186 -~~~-----~~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG~al~~~~~~~~~~~~~~ 239 (244)
T 1vzw_A 186 -CAA-----TDRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGKALYAKAFTLEEALEAT 239 (244)
T ss_dssp -HHT-----CSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHTTSSCHHHHHHHH
T ss_pred -HHh-----cCCCEEEECCCCCHHHHHHHHhhccCCCceeeeeHHHHcCCCCHHHHHHHh
Confidence 332 247899999999 5999999999 999999999999876 566555543
No 25
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=99.87 E-value=3.9e-22 Score=175.26 Aligned_cols=192 Identities=15% Similarity=0.143 Sum_probs=141.9
Q ss_pred ceEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCC--HHHHHHcCcCCCCCeeEEEEecChhhHHHHHH
Q 023494 58 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIG--PLVVDALRPVTDLPLDVHLMIVEPEQRVPDFI 135 (281)
Q Consensus 58 ~~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G--~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~ 135 (281)
+.|+||.++.| ++++ ++.+.++|++++|+|.||. +++ .+.++.+++.+ .+.+ |+|+++ +++.+.
T Consensus 20 ~~It~~~~~~~--~l~~-~~~~~~~G~~~v~lr~~~~------~~~~~~~~~~~l~~~~-~~~~-~l~v~~---~~~~a~ 85 (221)
T 1yad_A 20 HAITDDSKPVE--ELAR-IIITIQNEVDFIHIRERSK------SAADILKLLDLIFEGG-IDKR-KLVMNG---RVDIAL 85 (221)
T ss_dssp EEECCSCSCHH--HHHH-HHHHHGGGCSEEEECCTTS------CHHHHHHHHHHHHHTT-CCGG-GEEEES---CHHHHH
T ss_pred EEEECCCcCcc--hHHH-HHHHHHCCCCEEEEccCCC------CHHHHHHHHHHHHHhc-CcCC-eEEEeC---hHHHHH
Confidence 56889988876 5655 7888889999999998774 233 67788888764 4566 999986 778899
Q ss_pred HcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCCEEEEEeecCCCCCCccchhHHHHHHH
Q 023494 136 KAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISD 215 (281)
Q Consensus 136 ~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~ 215 (281)
++|+|+|++|.+.. .+ +.++.++. |+.+|+.++ |+.+..+.....+|||+++++.++.......+..++.+++
T Consensus 86 ~~gad~v~l~~~~~---~~-~~~~~~~~-~~~ig~sv~--t~~~~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~ 158 (221)
T 1yad_A 86 FSTIHRVQLPSGSF---SP-KQIRARFP-HLHIGRSVH--SLEEAVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSD 158 (221)
T ss_dssp TTTCCEEEECTTSC---CH-HHHHHHCT-TCEEEEEEC--SHHHHHHHHHTTCSEEEEECCC----------CHHHHHHH
T ss_pred HcCCCEEEeCCCcc---CH-HHHHHHCC-CCEEEEEcC--CHHHHHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHH
Confidence 99999999998742 22 34455444 889999874 4444333334569999998775432111012456777777
Q ss_pred HHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhcC
Q 023494 216 LRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKR 275 (281)
Q Consensus 216 lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~~ 275 (281)
+++.. ++++.++||||++|+.+++++|||.+++||++++++||.+.++++++.++
T Consensus 159 ~~~~~-----~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~ 213 (221)
T 1yad_A 159 IKQRI-----SIPVIAIGGMTPDRLRDVKQAGADGIAVMSGIFSSAEPLEAARRYSRKLK 213 (221)
T ss_dssp HHHHC-----CSCEEEESSCCGGGHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHH
T ss_pred HHHhC-----CCCEEEECCCCHHHHHHHHHcCCCEEEEhHHhhCCCCHHHHHHHHHHHHH
Confidence 76653 47899999999999999999999999999999999999999999887654
No 26
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=99.86 E-value=2.1e-21 Score=172.36 Aligned_cols=185 Identities=13% Similarity=0.169 Sum_probs=149.0
Q ss_pred CHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEcccccc
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSS 150 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~~ 150 (281)
+..+..+.++++|+|+||++.+|++|.++..+ +.++++++.++.|+.+|.++.+|++ ++.+.++|||.|++|.+.
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~--~~i~~i~~~~~ipv~v~ggi~~~~~-~~~~l~~Gad~V~lg~~~-- 106 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGRGSNH--ELLAEVVGKLDVQVELSGGIRDDES-LAAALATGCARVNVGTAA-- 106 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTSCCCH--HHHHHHHHHCSSEEEEESSCCSHHH-HHHHHHTTCSEEEECHHH--
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccCCChH--HHHHHHHHhcCCcEEEECCCCCHHH-HHHHHHcCCCEEEECchH--
Confidence 45566778888999999999999999998877 8899999888899999999999985 888999999999999985
Q ss_pred cccHHHHHHHHHHcCCcEEEEECCC------------------CCHHHHHHhhcc-CCEEEEEeecCCCCCCccchhHHH
Q 023494 151 TIHLHRTLNQIKDLGAKAGVVLNPA------------------TSLSAIECVLDV-VDLVLIMSVNPGFGGQSFIESQVK 211 (281)
Q Consensus 151 ~~~i~~~l~~ik~~G~k~Glai~p~------------------t~ie~~~~~l~~-vD~IlvmsV~pG~~GQ~f~~~~l~ 211 (281)
..++..+.+.+++.|.++.+.+++. ++.+.++.+.+. +|.|+++++.++..++.+..+.+
T Consensus 107 l~~p~~~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~~~- 185 (244)
T 2y88_A 107 LENPQWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSEGCSRFVVTDITKDGTLGGPNLDLL- 185 (244)
T ss_dssp HHCHHHHHHHHHHHGGGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHHTTCCCEEEEETTTTTTTSCCCHHHH-
T ss_pred hhChHHHHHHHHHcCCCEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHHhCCCCEEEEEecCCccccCCCCHHHH-
Confidence 4556667777788887777766654 456777777665 99999999998776666654444
Q ss_pred HHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHc---CCcEEEEcccccCCC-CHHHHHH
Q 023494 212 KISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEA---GANALVAGSAVFGAK-DYAEAIK 268 (281)
Q Consensus 212 kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~a---GAD~~VvGSaIf~a~-dp~~~~~ 268 (281)
+++++. .+++|.++|||+ ++++.++.++ |||.+++||+++..+ ++.+..+
T Consensus 186 --~~l~~~-----~~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG~al~~~~~~~~~~~~ 240 (244)
T 2y88_A 186 --AGVADR-----TDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALYARRFTLPQALA 240 (244)
T ss_dssp --HHHHTT-----CSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHTTSSCHHHHHH
T ss_pred --HHHHHh-----CCCCEEEECCCCCHHHHHHHHhhccCCCCEEEEcHHHHCCCcCHHHHHH
Confidence 444432 357899999999 5999999999 999999999999875 4554444
No 27
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=99.83 E-value=3.7e-20 Score=160.76 Aligned_cols=192 Identities=19% Similarity=0.176 Sum_probs=141.4
Q ss_pred ceEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccC--CHHHHHHcCcCCCCCeeEEEEecChhhHHHHHH
Q 023494 58 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITI--GPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFI 135 (281)
Q Consensus 58 ~~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~--G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~ 135 (281)
+.|+|+. +. ++.+.++.+.++|++++|++.. +.+. ..+.++.+++.+. .+.+++++++ +++.+.
T Consensus 18 ~~It~~~-~~---~~~~~~~~~~~~G~~~i~l~~~------~~~~~~~~~~~~~l~~~~~-~~~v~v~v~~---~~~~a~ 83 (215)
T 1xi3_A 18 YVITDRR-LK---PEVESVREALEGGATAIQMRIK------NAPTREMYEIGKTLRQLTR-EYDALFFVDD---RVDVAL 83 (215)
T ss_dssp EEECCTT-TS---CHHHHHHHHHHTTCSEEEECCC------SCCHHHHHHHHHHHHHHHH-HTTCEEEEES---CHHHHH
T ss_pred EEEECCc-hh---hHHHHHHHHHHCCCCEEEECCC------CCCHHHHHHHHHHHHHHHH-HcCCeEEEcC---hHHHHH
Confidence 5688887 54 8888899999999999999743 2222 2566666665432 3567888875 778899
Q ss_pred HcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCCEEEEEeecCCCCCCccchhHHHHHHH
Q 023494 136 KAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISD 215 (281)
Q Consensus 136 ~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~ 215 (281)
++|+|+|+++.... .+ +.++.++ .++.+|+.+ .|+.+........+|+|+++++.|+.+++.+.+..++.+++
T Consensus 84 ~~gad~v~l~~~~~---~~-~~~~~~~-~~~~~~v~~--~t~~e~~~~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~ 156 (215)
T 1xi3_A 84 AVDADGVQLGPEDM---PI-EVAKEIA-PNLIIGASV--YSLEEALEAEKKGADYLGAGSVFPTKTKEDARVIGLEGLRK 156 (215)
T ss_dssp HHTCSEEEECTTSC---CH-HHHHHHC-TTSEEEEEE--SSHHHHHHHHHHTCSEEEEECSSCC----CCCCCHHHHHHH
T ss_pred HcCCCEEEECCccC---CH-HHHHHhC-CCCEEEEec--CCHHHHHHHHhcCCCEEEEcCCccCCCCCCCCCcCHHHHHH
Confidence 99999999886531 23 2344444 577888876 34444333333469999999988876555566667788888
Q ss_pred HHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhcC
Q 023494 216 LRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKR 275 (281)
Q Consensus 216 lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~~ 275 (281)
+++.. ++++.++|||+++|+.++.++|+|.+++||++++++||.+.++++++.++
T Consensus 157 l~~~~-----~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~ 211 (215)
T 1xi3_A 157 IVESV-----KIPVVAIGGINKDNAREVLKTGVDGIAVISAVMGAEDVRKATEELRKIVE 211 (215)
T ss_dssp HHHHC-----SSCEEEESSCCTTTHHHHHTTTCSEEEESHHHHTSSSHHHHHHHHHHHHH
T ss_pred HHHhC-----CCCEEEECCcCHHHHHHHHHcCCCEEEEhHHHhCCCCHHHHHHHHHHHHh
Confidence 77654 46899999999999999999999999999999999999989999887654
No 28
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=99.82 E-value=2.9e-20 Score=163.07 Aligned_cols=198 Identities=19% Similarity=0.120 Sum_probs=145.2
Q ss_pred CceEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCC--HHHHHHcCcCCCCCeeEEEEecChhhHHHHH
Q 023494 57 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIG--PLVVDALRPVTDLPLDVHLMIVEPEQRVPDF 134 (281)
Q Consensus 57 ~~~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G--~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~ 134 (281)
-+.|+|+.++.|. +.+.++.+.++|+|++|++.+|+. ...++ .+.++.+++.+. .+.+++++++ +++.+
T Consensus 20 i~~It~~~~~~~~--~~~~~~~~~~~G~~~i~l~~~~~~---~~~~~~~~~~~~~l~~~~~-~~~v~v~v~~---~~~~a 90 (227)
T 2tps_A 20 VYFIMGSNNTKAD--PVTVVQKALKGGATLYQFREKGGD---ALTGEARIKFAEKAQAACR-EAGVPFIVND---DVELA 90 (227)
T ss_dssp EEEEECGGGCSSC--HHHHHHHHHHHTCSEEEECCCSTT---CCCHHHHHHHHHHHHHHHH-HHTCCEEEES---CHHHH
T ss_pred EEEEECCccccch--HHHHHHHHHHCCCCEEEEecCCCC---HhHHHHHHHHHHHHHHHHH-HcCCeEEEcC---HHHHH
Confidence 3568899888776 888899999999999999998873 33444 355666665432 3567788876 77889
Q ss_pred HHcCCCEEEEcccccccccHHHHHHHHHHcCC-cEEEEECCCCCHHHHHHhhccCCEEEEEeecCCCCCCc-cchhHHHH
Q 023494 135 IKAGADIVSVHCEQSSTIHLHRTLNQIKDLGA-KAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQS-FIESQVKK 212 (281)
Q Consensus 135 ~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~-k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~-f~~~~l~k 212 (281)
.++|+|+|++..+. .++.+. .+..|. .+|+. +.|+.+........+|+|+++++.|+..++. +.+..++.
T Consensus 91 ~~~gad~v~l~~~~---~~~~~~---~~~~g~~~~~~s--~~t~~e~~~a~~~g~d~v~~~~v~~t~~~~~~~~~~~~~~ 162 (227)
T 2tps_A 91 LNLKADGIHIGQED---ANAKEV---RAAIGDMILGVS--AHTMSEVKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSL 162 (227)
T ss_dssp HHHTCSEEEECTTS---SCHHHH---HHHHTTSEEEEE--ECSHHHHHHHHHHTCSEEEECCSSCCCSSSSCCCCCTTHH
T ss_pred HHcCCCEEEECCCc---cCHHHH---HHhcCCcEEEEe--cCCHHHHHHHHhCCCCEEEECCCcCCCCCCCCCCccCHHH
Confidence 99999999986553 223222 233564 55554 4555553333334699999999988765544 45556777
Q ss_pred HHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhcC
Q 023494 213 ISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKR 275 (281)
Q Consensus 213 I~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~~ 275 (281)
++++++..+ ++++.++|||+++|+.++.++|||.+++||++++++||.+.++++++.++
T Consensus 163 l~~~~~~~~----~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~ 221 (227)
T 2tps_A 163 IEAVRRQGI----SIPIVGIGGITIDNAAPVIQAGADGVSMISAISQAEDPESAARKFREEIQ 221 (227)
T ss_dssp HHHHHHTTC----CCCEEEESSCCTTTSHHHHHTTCSEEEESHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHhCC----CCCEEEEcCCCHHHHHHHHHcCCCEEEEhHHhhcCCCHHHHHHHHHHHHH
Confidence 777766532 26899999999999999999999999999999998999888888887654
No 29
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=99.82 E-value=1e-19 Score=160.89 Aligned_cols=180 Identities=17% Similarity=0.228 Sum_probs=142.1
Q ss_pred CHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCe---------eEEEEecChhhHHHHHHHcCCCE
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL---------DVHLMIVEPEQRVPDFIKAGADI 141 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~i---------daHLmv~dp~~~i~~~~~aGAd~ 141 (281)
.+.+.++.+.++|++++|+| +++.++.+|+.++.|+ +.|+|+.+|.++++.+.++|||.
T Consensus 37 ~~~~~a~~~~~~G~~~i~~~------------~~~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~ 104 (234)
T 1yxy_A 37 IMPLMAKAAQEAGAVGIRAN------------SVRDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIAV 104 (234)
T ss_dssp SHHHHHHHHHHHTCSEEEEE------------SHHHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSE
T ss_pred hHHHHHHHHHHCCCcEeecC------------CHHHHHHHHHhCCCCEEeeEcCCCCccccccCChHHHHHHHHHcCCCE
Confidence 77788899999999999986 5678999999888887 56899999988999999999999
Q ss_pred EEEccccccc---ccHHHHHHHHHHc--CCcEEEEECCCCCHHHHHHhhccCCEE--EEEeecCCCCCCccchhHHHHHH
Q 023494 142 VSVHCEQSST---IHLHRTLNQIKDL--GAKAGVVLNPATSLSAIECVLDVVDLV--LIMSVNPGFGGQSFIESQVKKIS 214 (281)
Q Consensus 142 Itvh~Ea~~~---~~i~~~l~~ik~~--G~k~Glai~p~t~ie~~~~~l~~vD~I--lvmsV~pG~~GQ~f~~~~l~kI~ 214 (281)
|++|.+.... ..+.++++.+|+. ++.+++ ++.|+.+....+...+|+| .+|+++|+. +.+.+..++.++
T Consensus 105 V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~--~~~t~~ea~~a~~~Gad~i~~~v~g~~~~~--~~~~~~~~~~i~ 180 (234)
T 1yxy_A 105 IAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMA--DISTFDEGLVAHQAGIDFVGTTLSGYTPYS--RQEAGPDVALIE 180 (234)
T ss_dssp EEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEE--ECSSHHHHHHHHHTTCSEEECTTTTSSTTS--CCSSSCCHHHHH
T ss_pred EEEcccccCCCCCccHHHHHHHHHHhCCCCeEEE--eCCCHHHHHHHHHcCCCEEeeeccccCCCC--cCCCCCCHHHHH
Confidence 9999986311 2568899999988 666555 4455555433344569999 778777754 334444455565
Q ss_pred HHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhcC
Q 023494 215 DLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKR 275 (281)
Q Consensus 215 ~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~~ 275 (281)
++++. ++++.++|||+ ++++.++.++|||.+++||+||+ |.+.+++|++.++
T Consensus 181 ~~~~~------~ipvia~GGI~s~~~~~~~~~~Gad~v~vGsal~~---p~~~~~~l~~~~~ 233 (234)
T 1yxy_A 181 ALCKA------GIAVIAEGKIHSPEEAKKINDLGVAGIVVGGAITR---PKEIAERFIEALK 233 (234)
T ss_dssp HHHHT------TCCEEEESCCCSHHHHHHHHTTCCSEEEECHHHHC---HHHHHHHHHHHTC
T ss_pred HHHhC------CCCEEEECCCCCHHHHHHHHHCCCCEEEEchHHhC---hHHHHHHHHHHHh
Confidence 55542 47899999999 99999999999999999999997 8889999988765
No 30
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.81 E-value=6.2e-19 Score=154.49 Aligned_cols=182 Identities=15% Similarity=0.194 Sum_probs=139.8
Q ss_pred cCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCe---------eEEEEecChhhHHHHHHHcCCC
Q 023494 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL---------DVHLMIVEPEQRVPDFIKAGAD 140 (281)
Q Consensus 70 ~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~i---------daHLmv~dp~~~i~~~~~aGAd 140 (281)
....+..+.++++|++++|++ +++.++.+|+.++.|+ +.|+|+.++.++++.+.++|+|
T Consensus 23 ~~~~~~a~~~~~~Ga~~i~~~------------~~~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad 90 (223)
T 1y0e_A 23 FIMSKMALAAYEGGAVGIRAN------------TKEDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIESQCE 90 (223)
T ss_dssp HHHHHHHHHHHHHTCSEEEEE------------SHHHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCS
T ss_pred ccHHHHHHHHHHCCCeeeccC------------CHHHHHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHhCCCC
Confidence 355677778889999999985 5688999999888887 5689998888889999999999
Q ss_pred EEEEccccccc--ccHHHHHHHHHHc--CCcEEEEECCCCCHHHHHHhhccCCEEEEEeecCCCCCCccc----hhHHHH
Q 023494 141 IVSVHCEQSST--IHLHRTLNQIKDL--GAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFI----ESQVKK 212 (281)
Q Consensus 141 ~Itvh~Ea~~~--~~i~~~l~~ik~~--G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~----~~~l~k 212 (281)
.|++|.++... .++.++++.+|+. |+.+++ ++.|+.+..+.....+|+| +..++|++++.+. ...++.
T Consensus 91 ~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~--~~~t~~e~~~~~~~G~d~i--~~~~~g~t~~~~~~~~~~~~~~~ 166 (223)
T 1y0e_A 91 VIALDATLQQRPKETLDELVSYIRTHAPNVEIMA--DIATVEEAKNAARLGFDYI--GTTLHGYTSYTQGQLLYQNDFQF 166 (223)
T ss_dssp EEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEE--ECSSHHHHHHHHHTTCSEE--ECTTTTSSTTSTTCCTTHHHHHH
T ss_pred EEEEeeecccCcccCHHHHHHHHHHhCCCceEEe--cCCCHHHHHHHHHcCCCEE--EeCCCcCcCCCCCCCCCcccHHH
Confidence 99999986311 3678999999998 888876 4455544333223348886 4567788776653 233455
Q ss_pred HHHHHHHhhhcCCCCeEEEecCC-ChhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhcC
Q 023494 213 ISDLRRMCLEKGVNPWIEVDGGV-GPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKR 275 (281)
Q Consensus 213 I~~lr~l~~~~~~~~~I~VDGGI-~~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~~ 275 (281)
++++++.. ++++.++||| +++++.+++++|||.+++||+||+ |....+++++.++
T Consensus 167 ~~~~~~~~-----~ipvia~GGI~~~~~~~~~~~~Gad~v~vG~al~~---p~~~~~~~~~~~~ 222 (223)
T 1y0e_A 167 LKDVLQSV-----DAKVIAEGNVITPDMYKRVMDLGVHCSVVGGAITR---PKEITKRFVQVME 222 (223)
T ss_dssp HHHHHHHC-----CSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHC---HHHHHHHHHHTTC
T ss_pred HHHHHhhC-----CCCEEEecCCCCHHHHHHHHHcCCCEEEEChHHcC---cHHHHHHHHHHhc
Confidence 55555432 5899999999 899999999999999999999997 7788888877653
No 31
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=99.80 E-value=7.7e-19 Score=160.04 Aligned_cols=208 Identities=17% Similarity=0.224 Sum_probs=156.6
Q ss_pred CCceEeEEEeccCcc--CHHHHHHHHHHcCCCeEEEE------eeeCccccc-----ccCC------HHHHHHcCcC-CC
Q 023494 56 SDIIVSPSILSANFA--KLGEQVKAVELAGCDWIHVD------VMDGRFVPN-----ITIG------PLVVDALRPV-TD 115 (281)
Q Consensus 56 ~~~~i~pSila~D~~--~l~~~l~~l~~~G~d~iHiD------ImDG~fvpn-----~~~G------~~~I~~ir~~-t~ 115 (281)
++..+.|.+.++|+. ...+.++.|.++|+|+|++. ++||..+.. +.-| ++.++++|+. ++
T Consensus 18 ~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~ 97 (271)
T 3nav_A 18 QQGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPE 97 (271)
T ss_dssp TBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCC
Confidence 345799999999973 55567788889999999999 789965553 1122 5788888875 77
Q ss_pred CCeeEEEEe-cCh------hhHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccC
Q 023494 116 LPLDVHLMI-VEP------EQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVV 188 (281)
Q Consensus 116 ~~idaHLmv-~dp------~~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~v 188 (281)
.|+.+ |+ .|| ++|++.+.++|+|+++++.. +.++..++.+.++++|++....+.|.|+.++++.+....
T Consensus 98 ~Pivl--m~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDl--p~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~ 173 (271)
T 3nav_A 98 TPIGL--LMYANLVYARGIDDFYQRCQKAGVDSVLIADV--PTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLG 173 (271)
T ss_dssp SCEEE--EECHHHHHHTCHHHHHHHHHHHTCCEEEETTS--CGGGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHC
T ss_pred CCEEE--EecCcHHHHHhHHHHHHHHHHCCCCEEEECCC--CHHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHC
Confidence 88875 66 466 46788999999999999866 457788999999999999988999999999999987764
Q ss_pred -CEEEEEeecCCCCCCc--cchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCC----
Q 023494 189 -DLVLIMSVNPGFGGQS--FIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGA---- 260 (281)
Q Consensus 189 -D~IlvmsV~pG~~GQ~--f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a---- 260 (281)
++|.+.+ ..|.+|.. +.+...+.++++|+.. +.++.|.|||+ ++++.+.+++|||.+|+||+|.+.
T Consensus 174 ~gfiY~vs-~~GvTG~~~~~~~~~~~~v~~vr~~~-----~~Pv~vGfGIst~e~~~~~~~~gADgvIVGSAiv~~i~~~ 247 (271)
T 3nav_A 174 KGYTYLLS-RAGVTGAETKANMPVHALLERLQQFD-----APPALLGFGISEPAQVKQAIEAGAAGAISGSAVVKIIETH 247 (271)
T ss_dssp CSCEEECC-CC--------CCHHHHHHHHHHHHTT-----CCCEEECSSCCSHHHHHHHHHTTCSEEEESHHHHHHHHHT
T ss_pred CCeEEEEe-ccCCCCcccCCchhHHHHHHHHHHhc-----CCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhh
Confidence 6765444 45766643 4455566777777653 36899999995 999998899999999999999852
Q ss_pred -CCHHHHHHHHHHh
Q 023494 261 -KDYAEAIKGIKTS 273 (281)
Q Consensus 261 -~dp~~~~~~l~~~ 273 (281)
+++.+..+.+++.
T Consensus 248 ~~~~~~~~~~~~~~ 261 (271)
T 3nav_A 248 LDNPAKQLTELANF 261 (271)
T ss_dssp TTCHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHH
Confidence 2455555555443
No 32
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=99.80 E-value=4.7e-19 Score=154.46 Aligned_cols=187 Identities=18% Similarity=0.186 Sum_probs=139.9
Q ss_pred CceEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEe-----cChhhHH
Q 023494 57 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMI-----VEPEQRV 131 (281)
Q Consensus 57 ~~~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv-----~dp~~~i 131 (281)
...|+|||++.|+.++.+.++.+.++|+++||++.+|... .+.++.+++..+ +|+++ .++. ++
T Consensus 6 ~~~i~~~i~~~d~~~~~~~~~~~~~~G~~~i~l~~~~~~~-------~~~i~~i~~~~~----~~l~vg~g~~~~~~-~i 73 (212)
T 2v82_A 6 KLPLIAILRGITPDEALAHVGAVIDAGFDAVEIPLNSPQW-------EQSIPAIVDAYG----DKALIGAGTVLKPE-QV 73 (212)
T ss_dssp SSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEETTSTTH-------HHHHHHHHHHHT----TTSEEEEECCCSHH-HH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEeCCChhH-------HHHHHHHHHhCC----CCeEEEeccccCHH-HH
Confidence 4569999999999999999999999999999999887421 245565554323 34444 4544 78
Q ss_pred HHHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCCEEEEEeecCCCCCCccchhHHH
Q 023494 132 PDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVK 211 (281)
Q Consensus 132 ~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~~~~l~ 211 (281)
+.+.++|||+|++... ..++++.++++|.++.+. ..|+.+..+.+...+|+|.+ +|+ + +..++
T Consensus 74 ~~a~~~Gad~V~~~~~------~~~~~~~~~~~g~~~~~g--~~t~~e~~~a~~~G~d~v~v---~~t---~---~~g~~ 136 (212)
T 2v82_A 74 DALARMGCQLIVTPNI------HSEVIRRAVGYGMTVCPG--CATATEAFTALEAGAQALKI---FPS---S---AFGPQ 136 (212)
T ss_dssp HHHHHTTCCEEECSSC------CHHHHHHHHHTTCEEECE--ECSHHHHHHHHHTTCSEEEE---TTH---H---HHCHH
T ss_pred HHHHHcCCCEEEeCCC------CHHHHHHHHHcCCCEEee--cCCHHHHHHHHHCCCCEEEE---ecC---C---CCCHH
Confidence 8999999999974432 235678888999875444 35555554444456999985 553 1 34567
Q ss_pred HHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEcccccCC----CCHHHHHHHHHHhcC
Q 023494 212 KISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGA----KDYAEAIKGIKTSKR 275 (281)
Q Consensus 212 kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a----~dp~~~~~~l~~~~~ 275 (281)
+++++++..+ .+++|.++|||+++++.++.++|||.+++||+||++ +||++.++++++.++
T Consensus 137 ~~~~l~~~~~---~~ipvia~GGI~~~~i~~~~~~Ga~gv~vGsai~~~~~~~~d~~~~~~~l~~~~~ 201 (212)
T 2v82_A 137 YIKALKAVLP---SDIAVFAVGGVTPENLAQWIDAGCAGAGLGSDLYRAGQSVERTAQQAAAFVKAYR 201 (212)
T ss_dssp HHHHHHTTSC---TTCEEEEESSCCTTTHHHHHHHTCSEEEECTTTCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcc---CCCeEEEeCCCCHHHHHHHHHcCCCEEEEChHHhCCCCCHHHHHHHHHHHHHHHH
Confidence 7777776543 147999999999999999999999999999999997 689999988877543
No 33
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=99.79 E-value=4.8e-19 Score=175.25 Aligned_cols=205 Identities=15% Similarity=0.059 Sum_probs=157.7
Q ss_pred ceEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHc
Q 023494 58 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA 137 (281)
Q Consensus 58 ~~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~a 137 (281)
+.|+|+.++.+..++.+.++.+.++|++++|++.+|..+... .+..+++++.+. ..+++|+++| +++.+.+.
T Consensus 13 YlITd~~~~~~~~~l~~~ve~al~~Gv~~vQlR~K~~~~~~~----~~~a~~l~~l~~-~~~v~liIND---~~dlA~~~ 84 (540)
T 3nl6_A 13 YLVTDSGMIPEGKTLYGQVEAGLQNGVTLVQIREKDADTKFF----IEEALQIKELCH-AHNVPLIIND---RIDVAMAI 84 (540)
T ss_dssp EEEC-CTTCCTTCCHHHHHHHHHHTTCSEEEECCSSSCTTHH----HHHHHHHHHHHH-HTTCCEEECS---CSHHHHHT
T ss_pred EEEECchhccCcchHHHHHHHHHHCCCCEEEEecCCCCHHHH----HHHHHHHHHHHH-hcCCEEEEeC---cHHHHHHc
Confidence 568898887777889999999999999999999999754332 345666665542 3578899998 88888999
Q ss_pred CCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhcc---CCEEEEEeecCCCCCCcc--chhHHHH
Q 023494 138 GADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV---VDLVLIMSVNPGFGGQSF--IESQVKK 212 (281)
Q Consensus 138 GAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~---vD~IlvmsV~pG~~GQ~f--~~~~l~k 212 (281)
|||+||+..++. ....++.+...+..+|++.+ |+-|..+..... +|||.+++++|+.+.+.. .+..++.
T Consensus 85 gAdGVHLgq~dl----~~~~ar~~lg~~~iiG~S~h--t~eea~~A~~~G~~~aDYv~~Gpvf~T~tK~~~~~~~~G~~~ 158 (540)
T 3nl6_A 85 GADGIHVGQDDM----PIPMIRKLVGPDMVIGWSVG--FPEEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAG 158 (540)
T ss_dssp TCSEEEECTTSS----CHHHHHHHHCTTSEEEEEEC--SHHHHHHHHHTCC--CCEEEESCCSCCCCCC----CCCHHHH
T ss_pred CCCEEEEChhhc----CHHHHHHHhCCCCEEEEECC--CHHHHHHHHHcCCCCCCEEEEcCCCCCCCCCCcCCCCCCHHH
Confidence 999999998853 23445555567889999996 433333333445 899999999998776655 3455777
Q ss_pred HHHHHHHhhhc-CCCCeEEEecCCChhcHHHHHH--------cCCcEEEEcccccCCCCHHHHHHHHHHhcCc
Q 023494 213 ISDLRRMCLEK-GVNPWIEVDGGVGPKNAYKVIE--------AGANALVAGSAVFGAKDYAEAIKGIKTSKRP 276 (281)
Q Consensus 213 I~~lr~l~~~~-~~~~~I~VDGGI~~e~i~~~~~--------aGAD~~VvGSaIf~a~dp~~~~~~l~~~~~~ 276 (281)
++++++.+.+. ..++++.+.|||+++|+.++++ +|+|.++++|+||+++||++++++|++.++.
T Consensus 159 l~~i~~~~~~~~~~~iPvvAIGGI~~~ni~~v~~~~~~~g~~~GadgvAVvsaI~~a~dp~~a~~~l~~~~~~ 231 (540)
T 3nl6_A 159 AIRVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRGLIDK 231 (540)
T ss_dssp HHHHHHHHHHTTCTTCEEEEESSCCTTTHHHHHHHCBCTTSSCBCSCEEESHHHHTCTTHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhccCCCCEEEEcCCCHHHHHHHHHhhcccccccCceEEEEeHHHhcCCCHHHHHHHHHHHHHh
Confidence 77777765331 2468999999999999999998 8999999999999999999999999987654
No 34
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=99.78 E-value=3.3e-18 Score=150.93 Aligned_cols=191 Identities=18% Similarity=0.157 Sum_probs=146.6
Q ss_pred cCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEccccc
Q 023494 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQS 149 (281)
Q Consensus 70 ~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~ 149 (281)
.+..+.++.+++.|+|++|+..+++.+ ++.....+.++++++.++.|+.++.++.+|... +.+.++|||.|.++.+.
T Consensus 33 ~~~~~~a~~~~~~G~d~i~v~~~~~~~-~~~~~~~~~i~~i~~~~~ipvi~~g~i~~~~~~-~~~~~~Gad~V~i~~~~- 109 (253)
T 1h5y_A 33 GDPVEMAVRYEEEGADEIAILDITAAP-EGRATFIDSVKRVAEAVSIPVLVGGGVRSLEDA-TTLFRAGADKVSVNTAA- 109 (253)
T ss_dssp ECHHHHHHHHHHTTCSCEEEEECCCCT-TTHHHHHHHHHHHHHHCSSCEEEESSCCSHHHH-HHHHHHTCSEEEESHHH-
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCCccc-cCCcccHHHHHHHHHhcCCCEEEECCCCCHHHH-HHHHHcCCCEEEEChHH-
Confidence 367788899999999999999888765 344556788899988778999999999998855 77888999999999874
Q ss_pred ccccHHHHHHHHHHcCC---cEEEEEC--C---------------CCCHHHHHHhhcc-CCEEEEEeecCCCCCCccchh
Q 023494 150 STIHLHRTLNQIKDLGA---KAGVVLN--P---------------ATSLSAIECVLDV-VDLVLIMSVNPGFGGQSFIES 208 (281)
Q Consensus 150 ~~~~i~~~l~~ik~~G~---k~Glai~--p---------------~t~ie~~~~~l~~-vD~IlvmsV~pG~~GQ~f~~~ 208 (281)
..++..+.+.++++|. .+++..+ | .++.+.++.+.+. +|+|+++++.++..+|.+.
T Consensus 110 -~~~~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~~G~d~i~~~~~~~~g~~~~~~-- 186 (253)
T 1h5y_A 110 -VRNPQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEELGAGEILLTSIDRDGTGLGYD-- 186 (253)
T ss_dssp -HHCTHHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTTTTTCSCCC--
T ss_pred -hhCcHHHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHhCCCCEEEEecccCCCCcCcCC--
Confidence 3345555666677774 4565553 1 2456767766664 9999999999877666664
Q ss_pred HHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCCC-CHHHHHHHHHH
Q 023494 209 QVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGAK-DYAEAIKGIKT 272 (281)
Q Consensus 209 ~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a~-dp~~~~~~l~~ 272 (281)
++.++++++.. ++++.++|||+ .+++.++.++|||.+++||++++.+ ++++..+.+++
T Consensus 187 -~~~i~~l~~~~-----~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgsal~~~~~~~~~~~~~l~~ 246 (253)
T 1h5y_A 187 -VELIRRVADSV-----RIPVIASGGAGRVEHFYEAAAAGADAVLAASLFHFRVLSIAQVKRYLKE 246 (253)
T ss_dssp -HHHHHHHHHHC-----SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTSSCHHHHHHHHHH
T ss_pred -HHHHHHHHHhc-----CCCEEEeCCCCCHHHHHHHHHcCCcHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 44555555543 47899999999 5999999999999999999999875 56665555544
No 35
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=99.78 E-value=3.2e-18 Score=152.52 Aligned_cols=190 Identities=18% Similarity=0.131 Sum_probs=146.7
Q ss_pred CHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEcccccc
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSS 150 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~~ 150 (281)
+..+..+.++++|+|++|++-+|+.|. +.....+.++++++.++.|+.++.++.+|.+ ++.+.++|||.|+++.+.
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~~~~~-~~~~~~~~i~~i~~~~~ipvi~~ggI~~~~~-~~~~~~~Gad~V~lg~~~-- 106 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDITASVE-KRKTMLELVEKVAEQIDIPFTVGGGIHDFET-ASELILRGADKVSINTAA-- 106 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSCSSS-HHHHHHHHHHHHHTTCCSCEEEESSCCSHHH-HHHHHHTTCSEEEESHHH--
T ss_pred CHHHHHHHHHHcCCCEEEEECCchhhc-CCcccHHHHHHHHHhCCCCEEEeCCCCCHHH-HHHHHHcCCCEEEEChHH--
Confidence 455666788899999999999998764 4556778889998888899999999999874 788889999999999885
Q ss_pred cccHHHHHHHHHHcCC-cEEEEECCC-------------------CCHHHHHHhhcc-CCEEEEEeecCCCCCCccchhH
Q 023494 151 TIHLHRTLNQIKDLGA-KAGVVLNPA-------------------TSLSAIECVLDV-VDLVLIMSVNPGFGGQSFIESQ 209 (281)
Q Consensus 151 ~~~i~~~l~~ik~~G~-k~Glai~p~-------------------t~ie~~~~~l~~-vD~IlvmsV~pG~~GQ~f~~~~ 209 (281)
..++..+.+.++..|. ++.+.+++. ++.+.++.+.+. ++.|+++++.++...+.+..+.
T Consensus 107 l~~p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~ 186 (253)
T 1thf_D 107 VENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEM 186 (253)
T ss_dssp HHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTSCSCCCHHH
T ss_pred HhChHHHHHHHHHcCCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHHCCCCEEEEEeccCCCCCCCCCHHH
Confidence 3445556666667774 344444442 456666766665 8999999988876666665444
Q ss_pred HHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCCC-CHHHHHHHHHH
Q 023494 210 VKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGAK-DYAEAIKGIKT 272 (281)
Q Consensus 210 l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a~-dp~~~~~~l~~ 272 (281)
+ +++++. .++++.++|||+ ++++.++.++|+|.+++||++++.+ ++++..+.+++
T Consensus 187 ~---~~l~~~-----~~ipvia~GGI~~~~d~~~~~~~Gadgv~vGsal~~~~~~~~~~~~~l~~ 243 (253)
T 1thf_D 187 I---RFVRPL-----TTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFREIDVRELKEYLKK 243 (253)
T ss_dssp H---HHHGGG-----CCSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTCSCHHHHHHHHHH
T ss_pred H---HHHHHh-----cCCCEEEECCCCCHHHHHHHHHcCChHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 4 444432 257899999999 6999999999999999999999887 89888888765
No 36
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=99.77 E-value=3e-18 Score=155.12 Aligned_cols=207 Identities=19% Similarity=0.201 Sum_probs=149.4
Q ss_pred CceEeEEEeccCcc--CHHHHHHHHHHcCCCeEEEEe------eeCccccc-----ccC------CHHHHHHcCcCC-CC
Q 023494 57 DIIVSPSILSANFA--KLGEQVKAVELAGCDWIHVDV------MDGRFVPN-----ITI------GPLVVDALRPVT-DL 116 (281)
Q Consensus 57 ~~~i~pSila~D~~--~l~~~l~~l~~~G~d~iHiDI------mDG~fvpn-----~~~------G~~~I~~ir~~t-~~ 116 (281)
+..+.|-++++|+. ...+.++.+.++|+|+|++++ +||.++.. +.- ..+.++++|+.. +.
T Consensus 16 ~~~~i~~i~~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~ 95 (262)
T 2ekc_A 16 EKALVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDI 95 (262)
T ss_dssp BCEEEEEEETTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTS
T ss_pred CceEEEEecCCCCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCC
Confidence 44689999999985 344556778899999999985 56644432 112 236688888765 77
Q ss_pred CeeEEEEe-cCh------hhHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhcc-C
Q 023494 117 PLDVHLMI-VEP------EQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV-V 188 (281)
Q Consensus 117 ~idaHLmv-~dp------~~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~-v 188 (281)
|+.+ |. .|| .++++.+.++|+|+++++.. +.++..++++.++++|+++...+.|.++.++++.+... .
T Consensus 96 Pi~~--m~y~n~v~~~g~~~f~~~~~~aG~dgvii~dl--~~ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ia~~a~ 171 (262)
T 2ekc_A 96 PFLL--MTYYNPIFRIGLEKFCRLSREKGIDGFIVPDL--PPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAAD 171 (262)
T ss_dssp CEEE--ECCHHHHHHHCHHHHHHHHHHTTCCEEECTTC--CHHHHHHHHHHHHHTTCEECCEECTTCCHHHHHHHHHHCS
T ss_pred CEEE--EecCcHHHHhhHHHHHHHHHHcCCCEEEECCC--CHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCC
Confidence 8765 63 466 46788899999999999966 35778899999999999988888999999888887765 4
Q ss_pred CEEEEEeecCCCCCCc--cc-hhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCC--CC
Q 023494 189 DLVLIMSVNPGFGGQS--FI-ESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGA--KD 262 (281)
Q Consensus 189 D~IlvmsV~pG~~GQ~--f~-~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a--~d 262 (281)
.++.+.++ .|..|.. +. +...+.++++|+.. +.++.|+|||+ ++++.. +.+|||.+|+||+|.+. ++
T Consensus 172 gfiy~vs~-~g~TG~~~~~~~~~~~~~v~~vr~~~-----~~pv~vG~GI~t~e~~~~-~~~gADgvIVGSai~~~~~~~ 244 (262)
T 2ekc_A 172 EMTYFVSV-TGTTGAREKLPYERIKKKVEEYRELC-----DKPVVVGFGVSKKEHARE-IGSFADGVVVGSALVKLAGQK 244 (262)
T ss_dssp SCEEEESS-CC---------CHHHHHHHHHHHHHC-----CSCEEEESSCCSHHHHHH-HHTTSSEEEECHHHHHHHHTT
T ss_pred CCEEEEec-CCccCCCCCcCcccHHHHHHHHHhhc-----CCCEEEeCCCCCHHHHHH-HHcCCCEEEECHHHHhhhhhh
Confidence 56655544 4555533 33 44567788888764 36899999998 999999 78899999999999975 44
Q ss_pred HHHHHHHHHHhc
Q 023494 263 YAEAIKGIKTSK 274 (281)
Q Consensus 263 p~~~~~~l~~~~ 274 (281)
+.+.++++-+.+
T Consensus 245 ~~~~~~~~~~~~ 256 (262)
T 2ekc_A 245 KIEDLGNLVKEL 256 (262)
T ss_dssp CHHHHHHHHHHH
T ss_pred hHHHHHHHHHHH
Confidence 444555544433
No 37
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=99.75 E-value=4e-18 Score=153.05 Aligned_cols=202 Identities=13% Similarity=0.068 Sum_probs=140.3
Q ss_pred eEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCc------ccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHH
Q 023494 59 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGR------FVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVP 132 (281)
Q Consensus 59 ~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~------fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~ 132 (281)
.|++.-. +..++.+.++.+.+.|++++|+...+.. ..+. ..-.+..+++++.+ ....+.|+++| .++
T Consensus 34 lIt~~~~--~~~~~~~~~~~al~~Gv~~vqlR~K~~~~~~~~~~l~~-~~~~~~a~~l~~l~-~~~~~~liInd---~~~ 106 (243)
T 3o63_A 34 LCTDARR--ERGDLAQFAEAALAGGVDIIQLRDKGSPGELRFGPLQA-RDELAACEILADAA-HRYGALFAVND---RAD 106 (243)
T ss_dssp EEECCCT--TTCCHHHHHHHHHHTTCSEEEECCTTCHHHHHHCSCCH-HHHHHHHHHHHHHH-HHTTCEEEEES---CHH
T ss_pred EEECCCc--ccchHHHHHHHHHHCCCCEEEEccCCCCccccccCCCH-HHHHHHHHHHHHHH-HhhCCEEEEeC---HHH
Confidence 4555422 2346889999999999999999877621 0010 01112334455443 23467889998 555
Q ss_pred HHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCCEEEEEeecCCCCCCccchhHHHH
Q 023494 133 DFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKK 212 (281)
Q Consensus 133 ~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~~~~l~k 212 (281)
.+.++|||+|++..+.. ....++.+...+..+|+..+ |+-|..+.....+|||.++.+.|+.+.+...+..++.
T Consensus 107 lA~~~gAdGVHLg~~dl----~~~~~r~~~~~~~~iG~S~h--t~~Ea~~A~~~GaDyI~vgpvf~T~tK~~~~~~gl~~ 180 (243)
T 3o63_A 107 IARAAGADVLHLGQRDL----PVNVARQILAPDTLIGRSTH--DPDQVAAAAAGDADYFCVGPCWPTPTKPGRAAPGLGL 180 (243)
T ss_dssp HHHHHTCSEEEECTTSS----CHHHHHHHSCTTCEEEEEEC--SHHHHHHHHHSSCSEEEECCSSCCCC-----CCCHHH
T ss_pred HHHHhCCCEEEecCCcC----CHHHHHHhhCCCCEEEEeCC--CHHHHHHHhhCCCCEEEEcCccCCCCCCCcchhhHHH
Confidence 67889999999988753 22344455556788999873 4444333334569999999998887655444566788
Q ss_pred HHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhcCc
Q 023494 213 ISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRP 276 (281)
Q Consensus 213 I~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~~~ 276 (281)
++++++... .++++.+.|||+++|+.++.++|||.+++||+||+++||.+++++|++.++.
T Consensus 181 l~~~~~~~~---~~iPvvAiGGI~~~ni~~~~~aGa~gvav~sai~~a~dp~~a~~~l~~~~~~ 241 (243)
T 3o63_A 181 VRVAAELGG---DDKPWFAIGGINAQRLPAVLDAGARRIVVVRAITSADDPRAAAEQLRSALTA 241 (243)
T ss_dssp HHHHHTC------CCCEEEESSCCTTTHHHHHHTTCCCEEESHHHHTCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHhcc---CCCCEEEecCCCHHHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHHHh
Confidence 887765421 2478999999999999999999999999999999999999999999987654
No 38
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=99.75 E-value=3.6e-18 Score=157.54 Aligned_cols=202 Identities=13% Similarity=0.208 Sum_probs=142.8
Q ss_pred eEEEeccCccCHHHHHHHHHHcC--CCeEEEEeeeCcccccc-cCCHHHHHHcCcCCCCCeeEEEEecChhh----HHHH
Q 023494 61 SPSILSANFAKLGEQVKAVELAG--CDWIHVDVMDGRFVPNI-TIGPLVVDALRPVTDLPLDVHLMIVEPEQ----RVPD 133 (281)
Q Consensus 61 ~pSila~D~~~l~~~l~~l~~~G--~d~iHiDImDG~fvpn~-~~G~~~I~~ir~~t~~~idaHLmv~dp~~----~i~~ 133 (281)
++-++|+|+.+++++++.+++.+ ++++.+ | +|++ ++|+..++.||+..+.++.+|++..|... +++.
T Consensus 25 ~~LiVALD~~~~~eal~l~~~l~~~v~~vKV----G--~~lf~~~G~~~V~~Lk~~~g~~IflDlKl~DIpnTv~~av~~ 98 (303)
T 3ru6_A 25 MKLCVALDLSTKEECLQLAKELKNLDIWLKV----G--LRAYLRDGFKFIEELKKVDDFKIFLDLKFHDIPNTMADACEE 98 (303)
T ss_dssp CEEEEECCCSSHHHHHHHHHHTTTSSCEEEE----C--HHHHHHHTHHHHHHHHHHCCCEEEEEEEECSCHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHhCCCccEEEe----C--HHHHHHhCHHHHHHHHHhhCCCEEEEeeeccCchhHHHHHHH
Confidence 45689999999999999988865 344444 4 5774 89999999999865788888999988764 4556
Q ss_pred HHHcCCCEEEEcccccccccHHHHHHHHHHcCC---cEEEEECCCCCHHHHHHhhcc--CCEEEE---EeecCCCCCCcc
Q 023494 134 FIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGA---KAGVVLNPATSLSAIECVLDV--VDLVLI---MSVNPGFGGQSF 205 (281)
Q Consensus 134 ~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~---k~Glai~p~t~ie~~~~~l~~--vD~Ilv---msV~pG~~GQ~f 205 (281)
+.++|+|++|+|+... .+.+..+++.+++.|. -+++.+-.+++-+.+.++... .+.|+- +....|..|--.
T Consensus 99 ~a~lGaD~vTVHa~~G-~~~m~aa~e~a~~~~~~~~llaVtvLTS~s~~~l~~l~~~~~~e~V~~lA~~a~~~G~dGvV~ 177 (303)
T 3ru6_A 99 VSKLGVDMINIHASAG-KIAIQEVMTRLSKFSKRPLVLAVSALTSFDEENFFSIYRQKIEEAVINFSKISYENGLDGMVC 177 (303)
T ss_dssp HHTTTCSEEEEEGGGC-HHHHHHHHHHHTTSSSCCEEEEECSCTTCCHHHHHHHHSSCHHHHHHHHHHHHHHTTCSEEEC
T ss_pred HHhcCCCEEEEeccCC-HHHHHHHHHHHHhcCCCceEEEEEEecCCCHHHHHHHHcCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 7789999999999874 5667788888877764 345555555555444433111 011111 122345444111
Q ss_pred chhHHHHHHHHHHHhhhcCCCCeEEEecCCChh-----------cHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhc
Q 023494 206 IESQVKKISDLRRMCLEKGVNPWIEVDGGVGPK-----------NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSK 274 (281)
Q Consensus 206 ~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e-----------~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~ 274 (281)
.+.- ++.+|+.++. ++ +.|.+||+++ |+.+++++|||++|+||+||+++||.++++++++.+
T Consensus 178 s~~E---~~~IR~~~~~---~f-l~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aGAd~iVvGr~I~~a~dp~~a~~~i~~~i 250 (303)
T 3ru6_A 178 SVFE---SKKIKEHTSS---NF-LTLTPGIRPFGETNDDQKRVANLAMARENLSDYIVVGRPIYKNENPRAVCEKILNKI 250 (303)
T ss_dssp CTTT---HHHHHHHSCT---TS-EEEECCCCTTC--------CCSHHHHHHTTCSEEEECHHHHTSSCHHHHHHHHHHHH
T ss_pred CHHH---HHHHHHhCCC---cc-EEECCCcCcccCCcccccccCCHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHH
Confidence 1221 3455655532 34 6699999987 899999999999999999999999999999999877
Q ss_pred Cc
Q 023494 275 RP 276 (281)
Q Consensus 275 ~~ 276 (281)
++
T Consensus 251 ~~ 252 (303)
T 3ru6_A 251 HR 252 (303)
T ss_dssp C-
T ss_pred Hh
Confidence 65
No 39
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=99.70 E-value=1.6e-16 Score=143.12 Aligned_cols=206 Identities=12% Similarity=0.135 Sum_probs=152.3
Q ss_pred CceEeEEEeccCcc--CHHHHHHHHHHcCCCeEEEE------eeeCccccc-----------ccCCHHHHHHcCcCCCCC
Q 023494 57 DIIVSPSILSANFA--KLGEQVKAVELAGCDWIHVD------VMDGRFVPN-----------ITIGPLVVDALRPVTDLP 117 (281)
Q Consensus 57 ~~~i~pSila~D~~--~l~~~l~~l~~~G~d~iHiD------ImDG~fvpn-----------~~~G~~~I~~ir~~t~~~ 117 (281)
+..+.|.+.+.|+. ...+.++.|.++|+|.|++. ++||..+.. +.--.++++++|+. .|
T Consensus 13 ~~ali~yitaG~P~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~--~P 90 (252)
T 3tha_A 13 ENANVAYTVLGYPNLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTK--KA 90 (252)
T ss_dssp SSEEEEEEETTSSCHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCS--SE
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcC--CC
Confidence 45799999999983 44455677789999999998 678854442 11234556667653 56
Q ss_pred eeEEEEe-cCh------hhHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccC-C
Q 023494 118 LDVHLMI-VEP------EQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVV-D 189 (281)
Q Consensus 118 idaHLmv-~dp------~~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~v-D 189 (281)
+. ||+ .|| ++|++.+.++|+|++.+..- +.++..++.+.++++|++....+.|+|+.++++.+.... +
T Consensus 91 iv--lm~Y~N~i~~~G~e~F~~~~~~aGvdG~IipDL--P~eE~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~g 166 (252)
T 3tha_A 91 LV--FMVYYNLIFSYGLEKFVKKAKSLGICALIVPEL--SFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKHAKG 166 (252)
T ss_dssp EE--EECCHHHHHHHCHHHHHHHHHHTTEEEEECTTC--CGGGCHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCCS
T ss_pred EE--EEeccCHHHHhhHHHHHHHHHHcCCCEEEeCCC--CHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCCC
Confidence 55 477 476 35788889999999999976 456788999999999999988899999999999988875 5
Q ss_pred EEEEEeecCCCCCCc--cchhHHHHHHHHHHHhhhcCCCCeEEEecCC-ChhcHHHHHHcCCcEEEEcccccC---CCCH
Q 023494 190 LVLIMSVNPGFGGQS--FIESQVKKISDLRRMCLEKGVNPWIEVDGGV-GPKNAYKVIEAGANALVAGSAVFG---AKDY 263 (281)
Q Consensus 190 ~IlvmsV~pG~~GQ~--f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI-~~e~i~~~~~aGAD~~VvGSaIf~---a~dp 263 (281)
+|.+.+ ..|.+|.. +.+...+.++++|+. .+.++.|.||| +++++..+.+ +||.+|+||+|.+ ..++
T Consensus 167 FiY~Vs-~~GvTG~~~~~~~~~~~~v~~vr~~-----~~~Pv~vGfGIst~e~a~~~~~-~ADGVIVGSAiVk~i~~~~~ 239 (252)
T 3tha_A 167 FIYLLA-SIGITGTKSVEEAILQDKVKEIRSF-----TNLPIFVGFGIQNNQDVKRMRK-VADGVIVGTSIVKCFKQGNL 239 (252)
T ss_dssp CEEEEC-CSCSSSCSHHHHHHHHHHHHHHHTT-----CCSCEEEESSCCSHHHHHHHTT-TSSEEEECHHHHHHTTSSCH
T ss_pred eEEEEe-cCCCCCcccCCCHHHHHHHHHHHHh-----cCCcEEEEcCcCCHHHHHHHHh-cCCEEEECHHHHHHHHhcCH
Confidence 665543 45777754 223334555665554 24789999999 5999998765 6999999999874 4577
Q ss_pred HHHHHHHHHhcC
Q 023494 264 AEAIKGIKTSKR 275 (281)
Q Consensus 264 ~~~~~~l~~~~~ 275 (281)
++..+.+++..+
T Consensus 240 ~~~~~~~~~~~~ 251 (252)
T 3tha_A 240 DIIMKDIEEIFK 251 (252)
T ss_dssp HHHHHHHHHHC-
T ss_pred HHHHHHHHHHhh
Confidence 777777776543
No 40
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=99.64 E-value=2.5e-15 Score=136.79 Aligned_cols=206 Identities=21% Similarity=0.253 Sum_probs=145.4
Q ss_pred CceEeEEEeccCcc--CHHHHHHHHHHcCCCeEEEEe------eeCccccc-----ccCC------HHHHHHcCcCCCCC
Q 023494 57 DIIVSPSILSANFA--KLGEQVKAVELAGCDWIHVDV------MDGRFVPN-----ITIG------PLVVDALRPVTDLP 117 (281)
Q Consensus 57 ~~~i~pSila~D~~--~l~~~l~~l~~~G~d~iHiDI------mDG~fvpn-----~~~G------~~~I~~ir~~t~~~ 117 (281)
+..+.|-|+++|+. ...+.++.+.++ +|+|++++ +||.++.. +..| .+.++++|+.++.|
T Consensus 15 ~~~li~~i~~GdP~~~~~~~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~~~P 93 (271)
T 1ujp_A 15 RAALIPYLTAGFPSREGFLQAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALTEKP 93 (271)
T ss_dssp BCEEEEEEETTSSCHHHHHHHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCCSC
T ss_pred CceEEEEecCCCCChHHHHHHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCC
Confidence 45789999999984 334566677788 99999974 56633321 1112 35688888877788
Q ss_pred eeEEEEe-cCh------hhHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhcc-CC
Q 023494 118 LDVHLMI-VEP------EQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV-VD 189 (281)
Q Consensus 118 idaHLmv-~dp------~~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~-vD 189 (281)
+.+ |. .|| .++++.+.++|+|++++..- +.++..++++.++++|+.....+.|.++.++++.+... ..
T Consensus 94 ii~--m~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl--~~ee~~~~~~~~~~~gl~~i~liap~s~~eri~~ia~~~~g 169 (271)
T 1ujp_A 94 LFL--MTYLNPVLAWGPERFFGLFKQAGATGVILPDL--PPDEDPGLVRLAQEIGLETVFLLAPTSTDARIATVVRHATG 169 (271)
T ss_dssp EEE--ECCHHHHHHHCHHHHHHHHHHHTCCEEECTTC--CGGGCHHHHHHHHHHTCEEECEECTTCCHHHHHHHHTTCCS
T ss_pred EEE--EecCcHHHHhhHHHHHHHHHHcCCCEEEecCC--CHHHHHHHHHHHHHcCCceEEEeCCCCCHHHHHHHHHhCCC
Confidence 877 55 355 45788899999999999865 35778899999999999888889999999988888765 45
Q ss_pred EEEEEeecCCCCCCc--cchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCCC----C
Q 023494 190 LVLIMSVNPGFGGQS--FIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGAK----D 262 (281)
Q Consensus 190 ~IlvmsV~pG~~GQ~--f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a~----d 262 (281)
++++.++ .|.+|.. +.+...+.++++|+.. +.++.|.|||+ ++++.++ +|||++||||+|.+.. .
T Consensus 170 fiy~vs~-~G~TG~~~~~~~~~~~~v~~vr~~~-----~~Pv~vGfGI~t~e~a~~~--~~ADgVIVGSAi~~~~~~~~~ 241 (271)
T 1ujp_A 170 FVYAVSV-TGVTGMRERLPEEVKDLVRRIKART-----ALPVAVGFGVSGKATAAQA--AVADGVVVGSALVRALEEGRS 241 (271)
T ss_dssp CEEEECC-------------CCHHHHHHHHTTC-----CSCEEEESCCCSHHHHHHH--TTSSEEEECHHHHHHHHTTCC
T ss_pred CEEEEec-CcccCCCCCCCccHHHHHHHHHhhc-----CCCEEEEcCCCCHHHHHHh--cCCCEEEEChHHhcccchHHH
Confidence 5554433 5666543 3333456667766542 47899999998 9999996 9999999999998642 4
Q ss_pred HHHHHHHHHHhcC
Q 023494 263 YAEAIKGIKTSKR 275 (281)
Q Consensus 263 p~~~~~~l~~~~~ 275 (281)
..+.++.+++.++
T Consensus 242 ~~~fv~~l~~~~~ 254 (271)
T 1ujp_A 242 LAPLLQEIRQGLQ 254 (271)
T ss_dssp HHHHHHHHHHHHB
T ss_pred HHHHHHHHHHHHH
Confidence 5667777776554
No 41
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=99.62 E-value=5.3e-16 Score=140.10 Aligned_cols=198 Identities=19% Similarity=0.225 Sum_probs=136.7
Q ss_pred EEEeccCccCHHHHHHHHHHcC--CCeEEEEeeeCccccc-ccCCHHHHHHcCcCCCCCeeEEEEecChhh----HHHHH
Q 023494 62 PSILSANFAKLGEQVKAVELAG--CDWIHVDVMDGRFVPN-ITIGPLVVDALRPVTDLPLDVHLMIVEPEQ----RVPDF 134 (281)
Q Consensus 62 pSila~D~~~l~~~l~~l~~~G--~d~iHiDImDG~fvpn-~~~G~~~I~~ir~~t~~~idaHLmv~dp~~----~i~~~ 134 (281)
+-++|+|+.+++++++.+++.+ ++++.+ | .+. ..+|++.++.||+. ++++.+|+|..|... +++.+
T Consensus 29 ~LivALD~~~~~~al~l~~~l~~~v~~~Kv----G--~~l~~~~G~~~v~~Lk~~-g~~VflDlK~~DIpnTv~~a~~~~ 101 (255)
T 3ldv_A 29 KVIVALDYDNLADALAFVDKIDPSTCRLKV----G--KEMFTLFGPDFVRELHKR-GFSVFLDLKFHDIPNTCSKAVKAA 101 (255)
T ss_dssp CEEEEECCSSHHHHHHHHTTSCGGGCEEEE----E--HHHHHHHHHHHHHHHHHT-TCCEEEEEEECSCHHHHHHHHHHH
T ss_pred CeEEEcCCCCHHHHHHHHHHhCCcCcEEEe----C--HHHHHhhCHHHHHHHHhc-CCCEEEEEecccchhHHHHHHHHH
Confidence 4589999999999999988764 345444 2 233 37899999999986 788999999988864 45668
Q ss_pred HHcCCCEEEEcccccccccHHHHHHHHHHcC----CcEEEEECCCCCHHHHHHhh-cc--CCEEEE---EeecCCCCCCc
Q 023494 135 IKAGADIVSVHCEQSSTIHLHRTLNQIKDLG----AKAGVVLNPATSLSAIECVL-DV--VDLVLI---MSVNPGFGGQS 204 (281)
Q Consensus 135 ~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G----~k~Glai~p~t~ie~~~~~l-~~--vD~Ilv---msV~pG~~GQ~ 204 (281)
.++|+|++|+|+... .+.++.+++.+++.| +-+|+.+-.+++-+.+.+.- .. -+.|+- +..+.|..|--
T Consensus 102 ~~~gaD~vTVh~~~G-~~~~~~a~~~~~~~g~~~~~li~VtvLTS~s~~~l~~~g~~~~~~~~V~~~A~~a~~aG~~GvV 180 (255)
T 3ldv_A 102 AELGVWMVNVHASGG-ERMMAASREILEPYGKERPLLIGVTVLTSMESADLQGIGILSAPQDHVLRLATLTKNAGLDGVV 180 (255)
T ss_dssp HHTTCSEEEEEGGGC-HHHHHHHHHHHGGGGGGSCEEEEECSCTTCCHHHHHHTTCCSCHHHHHHHHHHHHHHTTCSEEE
T ss_pred HhcCCCEEEEeccCC-HHHHHHHHHHHhhcCCCCceEEEEEEEecCCHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCEEE
Confidence 899999999998863 556777777776654 23556555555544443210 00 001111 11233444432
Q ss_pred cchhHHHHHHHHHHHhhhcCCCCeEEEecCCChh-----------cHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHh
Q 023494 205 FIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPK-----------NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTS 273 (281)
Q Consensus 205 f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e-----------~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~ 273 (281)
.-+. .++.+|+.++. ++ +.|.+||+++ |..+++++|||.+|+||+||+++||.++++++++.
T Consensus 181 ~sa~---e~~~iR~~~g~---~f-l~VtPGIr~qg~~~~dQ~Rv~t~~~a~~aGad~iVvGr~I~~a~dp~~a~~~i~~e 253 (255)
T 3ldv_A 181 CSAQ---EASLLKQHLGR---EF-KLVTPGIRPAGSEQGDQRRIMTPAQAIASGSDYLVIGRPITQAAHPEVVLEEINSS 253 (255)
T ss_dssp CCHH---HHHHHHHHHCT---TS-EEEEECCCCTTSTTSSCSSSCCHHHHHHTTCSEEEECHHHHTCSCHHHHHHHHHHH
T ss_pred ECHH---HHHHHHHhcCC---Cc-EEEeCCcccCcCCccceeccCCHHHHHHcCCCEEEECHHHhCCCCHHHHHHHHHHh
Confidence 3333 45556665542 45 4489999876 47789999999999999999999999999999886
Q ss_pred c
Q 023494 274 K 274 (281)
Q Consensus 274 ~ 274 (281)
+
T Consensus 254 i 254 (255)
T 3ldv_A 254 L 254 (255)
T ss_dssp C
T ss_pred h
Confidence 4
No 42
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=99.61 E-value=1.6e-15 Score=137.27 Aligned_cols=199 Identities=18% Similarity=0.200 Sum_probs=133.3
Q ss_pred EEEeccCccCHHHHHHHHHHcC--C-CeEEEEeeeCcccccc-cCCHHHHHHcCcCCCCCeeEEEEecChhh----HHHH
Q 023494 62 PSILSANFAKLGEQVKAVELAG--C-DWIHVDVMDGRFVPNI-TIGPLVVDALRPVTDLPLDVHLMIVEPEQ----RVPD 133 (281)
Q Consensus 62 pSila~D~~~l~~~l~~l~~~G--~-d~iHiDImDG~fvpn~-~~G~~~I~~ir~~t~~~idaHLmv~dp~~----~i~~ 133 (281)
+-++|+|+.++++.++.+++.+ + +++.+ | .+.+ .+|++.++.||+. ++++.+|+|..|... +++.
T Consensus 6 ~LivALD~~~~~~al~l~~~l~~~v~~~~Kv----G--~~l~~~~G~~~v~~Lk~~-g~~VflDlK~~DIpnTv~~a~~~ 78 (259)
T 3tfx_A 6 PVIVALDLDNEEQLNKILSKLGDPHDVFVKV----G--MELFYNAGIDVIKKLTQQ-GYKIFLDLKMHDIPNTVYNGAKA 78 (259)
T ss_dssp CEEEECCCSCHHHHHHHHHTTCCGGGCEEEE----C--HHHHHHHCHHHHHHHHHT-TCEEEEEEEECSCHHHHHHHHHH
T ss_pred CeEEEeCCCCHHHHHHHHHHhCcccceEEEe----C--HHHHHhcCHHHHHHHHHC-CCcEEEEecccccchHHHHHHHH
Confidence 4578999999999999988764 3 44444 4 2433 7999999999886 899999999999874 4567
Q ss_pred HHHcCCCEEEEcccccccccHHHHHHHHHHc---CC----cEEEEECCCCCHHHHH-Hh-hcc--CCEEE---EEeecCC
Q 023494 134 FIKAGADIVSVHCEQSSTIHLHRTLNQIKDL---GA----KAGVVLNPATSLSAIE-CV-LDV--VDLVL---IMSVNPG 199 (281)
Q Consensus 134 ~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~---G~----k~Glai~p~t~ie~~~-~~-l~~--vD~Il---vmsV~pG 199 (281)
+.++|+|++|+|+-.. .+.++.+++.+++. |. -++|..-.+..-+.++ ++ +.. .+.|+ -+..+.|
T Consensus 79 ~~~~gad~vTVh~~~G-~~~~~aa~~~~~~~~~~g~~~~~li~Vt~lTS~~~~~l~~~~g~~~~~~e~v~~~A~~a~~~G 157 (259)
T 3tfx_A 79 LAKLGITFTTVHALGG-SQMIKSAKDGLIAGTPAGHSVPKLLAVTELTSISDDVLRNEQNCRLPMAEQVLSLAKMAKHSG 157 (259)
T ss_dssp HHTTTCSEEEEEGGGC-HHHHHHHHHHHHHHSCTTSCCCEEEEECSCTTCCHHHHHHTSCBSSCHHHHHHHHHHHHHHTT
T ss_pred HHhcCCCEEEEcCCCC-HHHHHHHHHHHHHhcccCCCCceEEEEEEeCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhC
Confidence 7889999999998763 55677777777653 32 2233332233323331 11 000 00000 0011223
Q ss_pred CCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChh-----------cHHHHHHcCCcEEEEcccccCCCCHHHHHH
Q 023494 200 FGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPK-----------NAYKVIEAGANALVAGSAVFGAKDYAEAIK 268 (281)
Q Consensus 200 ~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e-----------~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~ 268 (281)
..|--..|.- ++.+|+.++. ++ +.|.+||+++ |+.+++++|||++|+||+||+++||.++++
T Consensus 158 ~dGvV~s~~e---~~~ir~~~~~---~f-~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aGad~iVvGr~I~~a~dp~~a~~ 230 (259)
T 3tfx_A 158 ADGVICSPLE---VKKLHENIGD---DF-LYVTPGIRPAGNAKDDQSRVATPKMAKEWGSSAIVVGRPITLASDPKAAYE 230 (259)
T ss_dssp CCEEECCGGG---HHHHHHHHCS---SS-EEEECCCCCC-----------CHHHHHHTTCSEEEECHHHHTSSSHHHHHH
T ss_pred CCEEEECHHH---HHHHHhhcCC---cc-EEEcCCcCCCCCCcCCccccCCHHHHHHcCCCEEEEChHHhCCCCHHHHHH
Confidence 3331112333 4445555432 34 5589999987 588999999999999999999999999999
Q ss_pred HHHHhcC
Q 023494 269 GIKTSKR 275 (281)
Q Consensus 269 ~l~~~~~ 275 (281)
++++.++
T Consensus 231 ~i~~~~~ 237 (259)
T 3tfx_A 231 AIKKEFN 237 (259)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 9998765
No 43
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=99.58 E-value=2.2e-14 Score=130.70 Aligned_cols=199 Identities=17% Similarity=0.167 Sum_probs=135.6
Q ss_pred EeEEE--eccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHc
Q 023494 60 VSPSI--LSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA 137 (281)
Q Consensus 60 i~pSi--la~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~a 137 (281)
-|||- +.-|+ +..+..+.++++|+++||+= -|-.|- .=.++.++.+|+.++.|+...=.+-||. .++.+.++
T Consensus 61 asPs~g~i~~~~-~p~~~A~~y~~~GA~~isvl-td~~~f---~Gs~~~l~~ir~~v~lPvl~kdfiid~~-qv~~A~~~ 134 (272)
T 3qja_A 61 ASPSAGALATIA-DPAKLAQAYQDGGARIVSVV-TEQRRF---QGSLDDLDAVRASVSIPVLRKDFVVQPY-QIHEARAH 134 (272)
T ss_dssp -------------CHHHHHHHHHHTTCSEEEEE-CCGGGH---HHHHHHHHHHHHHCSSCEEEESCCCSHH-HHHHHHHT
T ss_pred CCCCCCccCCCC-CHHHHHHHHHHcCCCEEEEe-cChhhc---CCCHHHHHHHHHhCCCCEEECccccCHH-HHHHHHHc
Confidence 47774 44443 67777888999999999972 222111 1136788888887788887532333432 27788899
Q ss_pred CCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCCCCccchhHHHHHHHH
Q 023494 138 GADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDL 216 (281)
Q Consensus 138 GAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~l 216 (281)
|||.|++.....+.+++.++++.+++.|+.+.+.++. .++++..+. .+|+|.+-.. ....|.+ .++.++++
T Consensus 135 GAD~VlLi~a~l~~~~l~~l~~~a~~lGl~~lvev~t---~ee~~~A~~~Gad~IGv~~r----~l~~~~~-dl~~~~~l 206 (272)
T 3qja_A 135 GADMLLLIVAALEQSVLVSMLDRTESLGMTALVEVHT---EQEADRALKAGAKVIGVNAR----DLMTLDV-DRDCFARI 206 (272)
T ss_dssp TCSEEEEEGGGSCHHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHHTCSEEEEESB----CTTTCCB-CTTHHHHH
T ss_pred CCCEEEEecccCCHHHHHHHHHHHHHCCCcEEEEcCC---HHHHHHHHHCCCCEEEECCC----ccccccc-CHHHHHHH
Confidence 9999999766544456888899999999999887753 334443332 5899866422 2223322 23445555
Q ss_pred HHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhcC
Q 023494 217 RRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKR 275 (281)
Q Consensus 217 r~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~~ 275 (281)
++.++. +.++.+.|||+ ++++..+.++|+|.+++||+|++++||.+.+++|.+..+
T Consensus 207 ~~~v~~---~~pvVaegGI~t~edv~~l~~~GadgvlVGsal~~a~dp~~~~~~l~~~~~ 263 (272)
T 3qja_A 207 APGLPS---SVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVTSGDPRAAVADLVTAGT 263 (272)
T ss_dssp GGGSCT---TSEEEEESCCCSHHHHHHHHHTTCSEEEECHHHHTCSCHHHHHHHHHTTTT
T ss_pred HHhCcc---cCEEEEECCCCCHHHHHHHHHcCCCEEEEcHHHhCCCCHHHHHHHHHhhhc
Confidence 544321 47888999999 999999999999999999999999999999999998654
No 44
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=99.58 E-value=4.8e-14 Score=126.21 Aligned_cols=201 Identities=16% Similarity=0.238 Sum_probs=132.4
Q ss_pred eEEEeccCccCHHHHHHHHHHcC--CCeEEEEeeeCccccc-ccCCHHHHHHcCcCCCCCeeEEEEecChhh----HHHH
Q 023494 61 SPSILSANFAKLGEQVKAVELAG--CDWIHVDVMDGRFVPN-ITIGPLVVDALRPVTDLPLDVHLMIVEPEQ----RVPD 133 (281)
Q Consensus 61 ~pSila~D~~~l~~~l~~l~~~G--~d~iHiDImDG~fvpn-~~~G~~~I~~ir~~t~~~idaHLmv~dp~~----~i~~ 133 (281)
++-++++|+.++++.++.+++.+ ++++.+ | .+. ..+|++.++.||+. ++++.+|++..|... +++.
T Consensus 9 ~~LivALD~~~~~~al~l~~~~~~~v~~~Kv----g--~~lf~~~G~~~v~~L~~~-g~~iflDlK~~DI~nTv~~~~~~ 81 (239)
T 3tr2_A 9 PKVIVAIDAGTVEQARAQINPLTPELCHLKI----G--SILFTRYGPAFVEELMQK-GYRIFLDLKFYDIPQTVAGACRA 81 (239)
T ss_dssp CCEEEECCCSSHHHHHHHHTTCCTTTCEEEE----E--HHHHHHHHHHHHHHHHHT-TCCEEEEEEECSCHHHHHHHHHH
T ss_pred CCeEEEeCCCCHHHHHHHHHHhCCcccEEEe----C--HHHHHhhCHHHHHHHHhc-CCCEEEEecccccchHHHHHHHH
Confidence 35589999999999999888765 456544 2 122 37899999999885 688888999887764 4567
Q ss_pred HHHcCCCEEEEcccccccccHHHHHHHHHHcC-----CcEEEEECCCCCHHHHHHh-hcc--CCEEEEE---eecCCCCC
Q 023494 134 FIKAGADIVSVHCEQSSTIHLHRTLNQIKDLG-----AKAGVVLNPATSLSAIECV-LDV--VDLVLIM---SVNPGFGG 202 (281)
Q Consensus 134 ~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G-----~k~Glai~p~t~ie~~~~~-l~~--vD~Ilvm---sV~pG~~G 202 (281)
+.+.|+|++|+|+... .+.++.+++.+++.+ +-+++.+-.+++-+.+.++ +.. -+.|+-+ ..+.|..|
T Consensus 82 ~~~~gad~vTvh~~~G-~~~~~~a~~~~~~~~~~~~~~l~~Vt~LTS~~~~~l~~~g~~~~~~~~v~~~A~~a~~~g~~G 160 (239)
T 3tr2_A 82 VAELGVWMMNIHISGG-RTMMETVVNALQSITLKEKPLLIGVTILTSLDGSDLKTLGIQEKVPDIVCRMATLAKSAGLDG 160 (239)
T ss_dssp HHHTTCSEEEEEGGGC-HHHHHHHHHHHHTCCCSSCCEEEEECSCTTCCHHHHHHTTCCSCHHHHHHHHHHHHHHHTCCE
T ss_pred HHhCCCCEEEEeccCC-HHHHHHHHHHHHhcCcCCCceEEEEEEEeeCCHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCE
Confidence 8899999999999863 556777777777653 1345544444554444321 000 0111111 11223333
Q ss_pred CccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChh-----------cHHHHHHcCCcEEEEcccccCCCCHHHHHHHHH
Q 023494 203 QSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPK-----------NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIK 271 (281)
Q Consensus 203 Q~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e-----------~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~ 271 (281)
--.-+.- ...+|+.+ +.++ +.|.+||+++ |+.+++++|||++|+||+||+++||.+++++++
T Consensus 161 vV~s~~e---~~~ir~~~---~~~f-l~vtPGIr~~g~~~~dQ~rv~t~~~~~~aGad~lVvGr~I~~a~dp~~a~~~i~ 233 (239)
T 3tr2_A 161 VVCSAQE---AALLRKQF---DRNF-LLVTPGIRLETDEKGDQKRVMTPRAAIQAGSDYLVIGRPITQSTDPLKALEAID 233 (239)
T ss_dssp EECCHHH---HHHHHTTC---CTTS-EEEECCBC----------CCBCHHHHHHHTCSEEEECHHHHTSSSHHHHHHHHH
T ss_pred EEECchh---HHHHHHhc---CCCc-EEECCCcCCCCCCcCcccccCCHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHH
Confidence 2222222 23344433 3345 4489999976 477899999999999999999999999999999
Q ss_pred HhcCc
Q 023494 272 TSKRP 276 (281)
Q Consensus 272 ~~~~~ 276 (281)
+.+..
T Consensus 234 ~~i~~ 238 (239)
T 3tr2_A 234 KDIKT 238 (239)
T ss_dssp HHC--
T ss_pred HHHhh
Confidence 87753
No 45
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=99.58 E-value=1.4e-16 Score=140.27 Aligned_cols=182 Identities=18% Similarity=0.165 Sum_probs=112.7
Q ss_pred cCccCHHHHHHHHHHcC-CCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChh----hHHHHHHHcCCCE
Q 023494 67 ANFAKLGEQVKAVELAG-CDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPE----QRVPDFIKAGADI 141 (281)
Q Consensus 67 ~D~~~l~~~l~~l~~~G-~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~----~~i~~~~~aGAd~ 141 (281)
.|+.++++.++.+++.+ .+++.+ | .+.+.+|++.++.||+. +.++.+|++..|.. .+++.++++|||+
T Consensus 16 ~D~~~~~~a~~i~~~~~~~~~~Kv----g--~~l~~~G~~~v~~l~~~-~~~v~lD~K~~DI~nT~~~~v~~~~~~GaD~ 88 (213)
T 1vqt_A 16 VLSLDMEDPIRFIDENGSFEVVKV----G--HNLAIHGKKIFDELAKR-NLKIILDLKFCDIPSTVERSIKSWDHPAIIG 88 (213)
T ss_dssp EEECCSSSHHHHHHHHCCCSEEEE----C--HHHHTTCTHHHHHHHTT-TCEEEEEEEECSCHHHHHHHHHHHCCTTEEE
T ss_pred CCCCCHHHHHHHHHHhCCCCEEEE----C--HHHHhhCHHHHHHHHHC-CCCEEEEeecccCchHHHHHHHHHHHCCCCE
Confidence 57777777777776653 233333 4 24334999999999985 67788888876654 4677788999999
Q ss_pred EEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhh
Q 023494 142 VSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCL 221 (281)
Q Consensus 142 Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~ 221 (281)
+|+|.+.. .+.+..+++.++ +..+++.+-.+++-+ +. +.++.+..| .++|++ +.... +.++++|+.++
T Consensus 89 vTvh~~~G-~~~l~~~~~~~~--~~~~~V~~lts~~~~-l~---~~v~~~a~~-~e~G~d---vV~~~-~~~~~ir~~~~ 156 (213)
T 1vqt_A 89 FTVHSCAG-YESVERALSATD--KHVFVVVKLTSMEGS-LE---DYMDRIEKL-NKLGCD---FVLPG-PWAKALREKIK 156 (213)
T ss_dssp EEEEGGGC-HHHHHHHHHHCS--SEEEEECCCTTSCCC-HH---HHHHHHHHH-HHHTCE---EECCH-HHHHHHTTTCC
T ss_pred EEEeccCC-HHHHHHHHHhcC--CCeEEEEEeCCCCHH-HH---HHHHHHHHH-hcCCCE---EEEcH-HHHHHHHHHCC
Confidence 99999863 333444443322 223344322122111 11 111111222 344443 22111 45555555432
Q ss_pred hcCCCCeEEEecCCChhc----------HHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhc
Q 023494 222 EKGVNPWIEVDGGVGPKN----------AYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSK 274 (281)
Q Consensus 222 ~~~~~~~I~VDGGI~~e~----------i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~ 274 (281)
.+ .|+|||++++ ..+ +++|+|++|+||+||+++||.++++++++.+
T Consensus 157 -----~~-~v~pGI~~~~~~~dq~rv~t~~~-i~aGad~iVvGR~I~~a~dP~~aa~~i~~~i 212 (213)
T 1vqt_A 157 -----GK-ILVPGIRMEVKADDQKDVVTLEE-MKGIANFAVLGREIYLSENPREKIKRIKEMR 212 (213)
T ss_dssp -----SC-EEECCBC---------CCBCHHH-HTTTCSEEEESHHHHTSSCHHHHHHHHTC--
T ss_pred -----CC-EEECCCCCCCCccchhhcCCHHH-HHCCCCEEEEChhhcCCCCHHHHHHHHHHHh
Confidence 24 7999999886 578 9999999999999999999999999998754
No 46
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=99.57 E-value=1.4e-13 Score=120.37 Aligned_cols=189 Identities=15% Similarity=0.131 Sum_probs=139.5
Q ss_pred eEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcC
Q 023494 59 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAG 138 (281)
Q Consensus 59 ~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aG 138 (281)
.+.|.+-..|..++.+.++.+.++|++++++...+ | ...+.++.+++ ++..+.+.. +.++ +.++.+.++|
T Consensus 14 ~ii~vi~~~~~~~~~~~~~~l~~gGv~~iel~~k~----~---~~~~~i~~~~~-~~~~~gag~-vl~~-d~~~~A~~~G 83 (207)
T 2yw3_A 14 RLLPLLTVRGGEDLLGLARVLEEEGVGALEITLRT----E---KGLEALKALRK-SGLLLGAGT-VRSP-KEAEAALEAG 83 (207)
T ss_dssp CEEEEECCCSCCCHHHHHHHHHHTTCCEEEEECSS----T---HHHHHHHHHTT-SSCEEEEES-CCSH-HHHHHHHHHT
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeCCC----h---HHHHHHHHHhC-CCCEEEeCe-EeeH-HHHHHHHHcC
Confidence 47888887888899999999999999999997433 2 24578888888 777778877 4344 4788999999
Q ss_pred CCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCCEEEEEeecCCCCCCccchhHHHHHHHHHH
Q 023494 139 ADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRR 218 (281)
Q Consensus 139 Ad~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~ 218 (281)
||+++..... .++++..+++|....+-. .|+-|..+.+...+|||-+ +|. ... ..++.|+.++.
T Consensus 84 Ad~v~~~~~d------~~v~~~~~~~g~~~i~G~--~t~~e~~~A~~~Gad~v~~---fpa---~~~--gG~~~lk~l~~ 147 (207)
T 2yw3_A 84 AAFLVSPGLL------EEVAALAQARGVPYLPGV--LTPTEVERALALGLSALKF---FPA---EPF--QGVRVLRAYAE 147 (207)
T ss_dssp CSEEEESSCC------HHHHHHHHHHTCCEEEEE--CSHHHHHHHHHTTCCEEEE---TTT---TTT--THHHHHHHHHH
T ss_pred CCEEEcCCCC------HHHHHHHHHhCCCEEecC--CCHHHHHHHHHCCCCEEEE---ecC---ccc--cCHHHHHHHHh
Confidence 9999877542 356778888888765543 3444444444446999966 562 111 02455667776
Q ss_pred HhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEcccccCCCC---HHHHHHHHHHhcCcCc
Q 023494 219 MCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAKD---YAEAIKGIKTSKRPQA 278 (281)
Q Consensus 219 l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a~d---p~~~~~~l~~~~~~~~ 278 (281)
.++ ++++...||||++|+.+++++|++.+++||+|++ +| +++.++++.+.+++++
T Consensus 148 ~~~----~ipvvaiGGI~~~n~~~~l~aGa~~vavgSai~~-~d~~~i~~~a~~~~~~~~~~~ 205 (207)
T 2yw3_A 148 VFP----EVRFLPTGGIKEEHLPHYAALPNLLAVGGSWLLQ-GNLEAVRAKVRAAKALLSPQA 205 (207)
T ss_dssp HCT----TCEEEEBSSCCGGGHHHHHTCSSBSCEEESGGGS-SCHHHHHHHHHHHHHHC----
T ss_pred hCC----CCcEEEeCCCCHHHHHHHHhCCCcEEEEehhhhC-CCHHHHHHHHHHHHHHhcccC
Confidence 653 4789999999999999999999999999999998 88 5777788877776653
No 47
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=99.57 E-value=5.5e-15 Score=130.43 Aligned_cols=168 Identities=17% Similarity=0.262 Sum_probs=114.6
Q ss_pred cccccccCCHHHHHHcCcCCCCCeeE-EEEecChhhH-----HHHHHHcCCCEEEE-cccc-cccccHHHHHHHHHHcCC
Q 023494 95 RFVPNITIGPLVVDALRPVTDLPLDV-HLMIVEPEQR-----VPDFIKAGADIVSV-HCEQ-SSTIHLHRTLNQIKDLGA 166 (281)
Q Consensus 95 ~fvpn~~~G~~~I~~ir~~t~~~ida-HLmv~dp~~~-----i~~~~~aGAd~Itv-h~Ea-~~~~~i~~~l~~ik~~G~ 166 (281)
.|.|.+.+ ++.+|+.+++|+.+ |+-..+++.| ++++.++|||+|++ |.|- .+..++.+.++.++++|+
T Consensus 37 ~~~~~~~~----l~~v~~~~~~~v~aqd~~~~~~ga~tGei~~~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~Gl 112 (219)
T 2h6r_A 37 GVAPQFVD----LRMIVENVNIPVYAQHIDNINPGSHTGHILAEAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLGL 112 (219)
T ss_dssp EEECCTTT----HHHHHHHCCSCBEESCCCSCCSBSCTTCCCHHHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHTC
T ss_pred EEECCHHH----HHHHHHHcCCcEEEEECChhhcCCccCchHHHHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCCC
Confidence 34565554 34445445788855 4446677777 99999999999999 5541 134568899999999999
Q ss_pred cEEEEECCCCCHHHHHHhhccCCEEEEEeecC-CCCC---CccchhHHHHHH-HHHHHhhhcCCCCeEEEecCCC-hhcH
Q 023494 167 KAGVVLNPATSLSAIECVLDVVDLVLIMSVNP-GFGG---QSFIESQVKKIS-DLRRMCLEKGVNPWIEVDGGVG-PKNA 240 (281)
Q Consensus 167 k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~p-G~~G---Q~f~~~~l~kI~-~lr~l~~~~~~~~~I~VDGGI~-~e~i 240 (281)
.+.+.+++.++.+.+..+ ..++|.+-+++. | +| +.+.++.++... .+|+.. .+.+|.+.|||+ ++.+
T Consensus 113 ~~iv~v~~~~e~~~~~~~--~~~~i~~~~~~~iG-tG~~~~t~~~~~~~~~~~~ir~~~----~~~~ii~ggGI~~~~~~ 185 (219)
T 2h6r_A 113 ETIVCTNNINTSKAVAAL--SPDCIAVEPPELIG-TGIPVSKANPEVVEGTVRAVKEIN----KDVKVLCGAGISKGEDV 185 (219)
T ss_dssp EEEEEESSSHHHHHHTTT--CCSEEEECCCC---------------CSHHHHHHHHHHC----TTCEEEECSSCCSHHHH
T ss_pred eEEEEeCCchHHHHHHhC--CCCEEEEEeccccc-cCCCCccCCHHHHHHHHHHHHhcc----CCCeEEEEeCcCcHHHH
Confidence 999999987766555443 356776655544 5 46 667665333333 333332 147899999999 5788
Q ss_pred HHHHHcCCcEEEEcccccCCCCHHHHHHHHHHh
Q 023494 241 YKVIEAGANALVAGSAVFGAKDYAEAIKGIKTS 273 (281)
Q Consensus 241 ~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~ 273 (281)
..+.+.|+|.+++||++++++||.+.+++|++.
T Consensus 186 ~~~~~~gaDgvlVGsAi~~~~d~~~~~~~l~~~ 218 (219)
T 2h6r_A 186 KAALDLGAEGVLLASGVVKAKNVEEAIRELIKF 218 (219)
T ss_dssp HHHHTTTCCCEEESHHHHTCSSHHHHHHHHCC-
T ss_pred HHHhhCCCCEEEEcHHHhCcccHHHHHHHHHHh
Confidence 889999999999999999999999998888653
No 48
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=99.55 E-value=7.5e-14 Score=120.63 Aligned_cols=187 Identities=18% Similarity=0.159 Sum_probs=133.3
Q ss_pred ceEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCC--CCCeeEEEEecChhhHHHHHH
Q 023494 58 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT--DLPLDVHLMIVEPEQRVPDFI 135 (281)
Q Consensus 58 ~~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t--~~~idaHLmv~dp~~~i~~~~ 135 (281)
..+.|++-..|..+..+.++.+.++|++++++... .| .+.+.++.+|+.. +.++.+. .+.+|.. .+.+.
T Consensus 10 ~~~i~~~~~~~~~~~~~~~~~~~~~G~~~iev~~~----~~---~~~~~i~~ir~~~~~~~~ig~~-~v~~~~~-~~~a~ 80 (205)
T 1wa3_A 10 HKIVAVLRANSVEEAKEKALAVFEGGVHLIEITFT----VP---DADTVIKELSFLKEKGAIIGAG-TVTSVEQ-CRKAV 80 (205)
T ss_dssp HCEEEEECCSSHHHHHHHHHHHHHTTCCEEEEETT----ST---THHHHHHHTHHHHHTTCEEEEE-SCCSHHH-HHHHH
T ss_pred CCEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCC----Ch---hHHHHHHHHHHHCCCCcEEEec-ccCCHHH-HHHHH
Confidence 35899999999999999999999999999988532 12 3466788888763 3444443 3457764 57788
Q ss_pred HcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCCEEEEEeecCCCCCCccchhHHHHHHH
Q 023494 136 KAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISD 215 (281)
Q Consensus 136 ~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~ 215 (281)
++|||++ ++... . .++++.++++|+.+-.-+ .|+-+....+...+|+|-+ +|+ .+..++.+++
T Consensus 81 ~~Gad~i-v~~~~--~---~~~~~~~~~~g~~vi~g~--~t~~e~~~a~~~Gad~vk~---~~~------~~~g~~~~~~ 143 (205)
T 1wa3_A 81 ESGAEFI-VSPHL--D---EEISQFCKEKGVFYMPGV--MTPTELVKAMKLGHTILKL---FPG------EVVGPQFVKA 143 (205)
T ss_dssp HHTCSEE-ECSSC--C---HHHHHHHHHHTCEEECEE--CSHHHHHHHHHTTCCEEEE---TTH------HHHHHHHHHH
T ss_pred HcCCCEE-EcCCC--C---HHHHHHHHHcCCcEECCc--CCHHHHHHHHHcCCCEEEE---cCc------cccCHHHHHH
Confidence 8999999 77653 1 467888899998876533 2444433333345887743 221 1122344444
Q ss_pred HHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEcccccCCCC---HHHHHHHHHHhcC
Q 023494 216 LRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAKD---YAEAIKGIKTSKR 275 (281)
Q Consensus 216 lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a~d---p~~~~~~l~~~~~ 275 (281)
+++.. . ++++.++|||+.+|+.++.++|||.+++||+||+ +| |.+.++++++.++
T Consensus 144 l~~~~---~-~~pvia~GGI~~~~~~~~~~~Ga~~v~vGs~i~~-~d~~~~~~~~~~~~~~~~ 201 (205)
T 1wa3_A 144 MKGPF---P-NVKFVPTGGVNLDNVCEWFKAGVLAVGVGSALVK-GTPDEVREKAKAFVEKIR 201 (205)
T ss_dssp HHTTC---T-TCEEEEBSSCCTTTHHHHHHHTCSCEEECHHHHC-SCHHHHHHHHHHHHHHHH
T ss_pred HHHhC---C-CCcEEEcCCCCHHHHHHHHHCCCCEEEECccccC-CCHHHHHHHHHHHHHHHH
Confidence 44322 1 5899999999999999999999999999999999 89 8888888887654
No 49
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=99.51 E-value=1.7e-13 Score=121.30 Aligned_cols=189 Identities=17% Similarity=0.151 Sum_probs=132.6
Q ss_pred EEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccc-cCCHHHHHHcCcCCCC-CeeEEEEecChhhHHHHHHHcCC
Q 023494 62 PSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNI-TIGPLVVDALRPVTDL-PLDVHLMIVEPEQRVPDFIKAGA 139 (281)
Q Consensus 62 pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~-~~G~~~I~~ir~~t~~-~idaHLmv~dp~~~i~~~~~aGA 139 (281)
+-++|+|+....+.++.+... ++++.+ | .+.+ .+|++.++.|++..++ ++.+|+|..|..+.+..+.+.-+
T Consensus 5 ~livALD~~~al~l~~~l~~~-v~~~Kv----G--~~l~~~~G~~~v~~L~~~~~~~~VflDlK~~DI~nTv~~~~~~~~ 77 (222)
T 4dbe_A 5 RVILAMDKPLSYQVLKEMENE-LYGIKV----G--LPLVLDLGVDKTRELLIGLDVEEIIVDFKLADIGYIMKSIVERLS 77 (222)
T ss_dssp CEEEEESSCCCHHHHHHHGGG-CSEEEE----E--HHHHHHHCHHHHHHHHHTCCCSEEEEEEEECSCHHHHHHHHTTCT
T ss_pred CeEEECCHHHHHHHHHHhCCc-CcEEEE----C--HHHHHhhCHHHHHHHHHhcCCCeEEEEeeecchHHHHHHHHHHHH
Confidence 457889987444444444433 677766 3 3444 7999999999885578 99999999999987776554433
Q ss_pred --CEEEEcccccc-cccHHHHHHHHHHcCCcEEEEECCCCCH------HHHHHhhc--cCCEEEEEeecCCCCCCccchh
Q 023494 140 --DIVSVHCEQSS-TIHLHRTLNQIKDLGAKAGVVLNPATSL------SAIECVLD--VVDLVLIMSVNPGFGGQSFIES 208 (281)
Q Consensus 140 --d~Itvh~Ea~~-~~~i~~~l~~ik~~G~k~Glai~p~t~i------e~~~~~l~--~vD~IlvmsV~pG~~GQ~f~~~ 208 (281)
|++|+|.-. . .+.++.+++.+++.|..+-+....+.+- +.+..+.. .+|.+.. ++ ..|
T Consensus 78 ~~d~vTVh~~~-G~~~~~~~a~~~~~~~~~~v~vLts~s~~~~~~~~~~~~a~~a~~~g~~GvV~-------sa--t~p- 146 (222)
T 4dbe_A 78 FANSFIAHSFI-GVKGSLDELKRYLDANSKNLYLVAVMSHEGWSTLFADYIKNVIREISPKGIVV-------GG--TKL- 146 (222)
T ss_dssp TCSEEEEESTT-CTTTTHHHHHHHHHHTTCEEEEEEECSSTTCCCTTHHHHHHHHHHHCCSEEEE-------CT--TCH-
T ss_pred hCCEEEEEcCc-CcHHHHHHHHHHHHhcCCcEEEEEeCCCcchHHHHHHHHHHHHHHhCCCEEEE-------CC--CCH-
Confidence 999999875 3 4678899999888887665544433321 22233322 2554432 11 123
Q ss_pred HHHHHHHHHHHhhhcCCCCeEEEecCCChh--cHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhcC
Q 023494 209 QVKKISDLRRMCLEKGVNPWIEVDGGVGPK--NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKR 275 (281)
Q Consensus 209 ~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e--~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~~ 275 (281)
+.++.+|+..+ + .+.|.+||+++ +..+++++|+|.+|+||.|++++||.++++++++.++
T Consensus 147 --~e~~~ir~~~~----~-~~~vtPGI~~~g~tp~~a~~~Gad~iVVGR~I~~A~dP~~aa~~i~~~i~ 208 (222)
T 4dbe_A 147 --DHITQYRRDFE----K-MTIVSPGMGSQGGSYGDAVCAGADYEIIGRSIYNAGNPLTALRTINKIIE 208 (222)
T ss_dssp --HHHHHHHHHCT----T-CEEEECCBSTTSBCTTHHHHHTCSEEEECHHHHTSSSHHHHHHHHHHHHH
T ss_pred --HHHHHHHHhCC----C-CEEEcCCcccCccCHHHHHHcCCCEEEECHHhcCCCCHHHHHHHHHHHHH
Confidence 34555566553 2 36689999988 8889999999999999999999999999999887654
No 50
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=99.50 E-value=3.5e-13 Score=122.92 Aligned_cols=167 Identities=19% Similarity=0.171 Sum_probs=123.7
Q ss_pred CHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChh--------------hHHHHHHH
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPE--------------QRVPDFIK 136 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~--------------~~i~~~~~ 136 (281)
++++ +..+.++|+|+||++ |+.++++++-++.+++.+|+..+ +.+|.|+...+ +.++.+.+
T Consensus 48 s~~~-a~~A~~gGAdRIELc--~~l~~GGlTPS~g~i~~a~~~~~--ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~ 122 (287)
T 3iwp_A 48 SVES-AVNAERGGADRIELC--SGLSEGGTTPSMGVLQVVKQSVQ--IPVFVMIRPRGGDFLYSDREIEVMKADIRLAKL 122 (287)
T ss_dssp SHHH-HHHHHHHTCSEEEEC--BCGGGTCBCCCHHHHHHHHTTCC--SCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHH
T ss_pred CHHH-HHHHHHhCCCEEEEC--CCCCCCCCCCCHHHHHHHHHhcC--CCeEEEEecCCCCcccCHHHHHHHHHHHHHHHH
Confidence 4444 556677899999998 88888899999999999998754 66888996443 26788999
Q ss_pred cCCCEEEEccccc-ccccHHHHHHHHHHcCCcEEEEECCC-----CCHHHHHHhhc-cCCEEEEEeecCCCCCC-ccchh
Q 023494 137 AGADIVSVHCEQS-STIHLHRTLNQIKDLGAKAGVVLNPA-----TSLSAIECVLD-VVDLVLIMSVNPGFGGQ-SFIES 208 (281)
Q Consensus 137 aGAd~Itvh~Ea~-~~~~i~~~l~~ik~~G~k~Glai~p~-----t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ-~f~~~ 208 (281)
+|||+|.|++-.. ...+...+.+.++..+. .++++++. ++.+.++.+++ .+|.||- +|| +-.++
T Consensus 123 ~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~~-l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILT-------SG~~~~a~~ 194 (287)
T 3iwp_A 123 YGADGLVFGALTEDGHIDKELCMSLMAICRP-LPVTFHRAFDMVHDPMAALETLLTLGFERVLT-------SGCDSSALE 194 (287)
T ss_dssp TTCSEEEECCBCTTSCBCHHHHHHHHHHHTT-SCEEECGGGGGCSCHHHHHHHHHHHTCSEEEE-------CTTSSSTTT
T ss_pred cCCCEEEEeeeCCCCCcCHHHHHHHHHHcCC-CcEEEECchhccCCHHHHHHHHHHcCCCEEEC-------CCCCCChHH
Confidence 9999999997321 13456666666666654 68898887 67777777777 6898875 333 23345
Q ss_pred HHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHH-cCCcEEEE
Q 023494 209 QVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIE-AGANALVA 253 (281)
Q Consensus 209 ~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~-aGAD~~Vv 253 (281)
.++.|+++.+. .+..+.|.++||||++|++++++ +|++.|=.
T Consensus 195 Gl~~Lk~Lv~~---a~~rI~ImaGGGV~~~Ni~~l~~~tG~~~~H~ 237 (287)
T 3iwp_A 195 GLPLIKRLIEQ---AKGRIVVMPGGGITDRNLQRILEGSGATEFHC 237 (287)
T ss_dssp THHHHHHHHHH---HTTSSEEEECTTCCTTTHHHHHHHHCCSEEEE
T ss_pred hHHHHHHHHHH---hCCCCEEEECCCcCHHHHHHHHHhhCCCEEeE
Confidence 55555555544 33458899999999999999987 99997754
No 51
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=99.49 E-value=2.5e-12 Score=117.08 Aligned_cols=196 Identities=19% Similarity=0.241 Sum_probs=144.9
Q ss_pred EeEE--EeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHc
Q 023494 60 VSPS--ILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA 137 (281)
Q Consensus 60 i~pS--ila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~a 137 (281)
-||| +++-|+ +..+..+.++++|++.||+= -|..|. .=+++.++.+|+.+++|+..-=.+.||. .+..+..+
T Consensus 68 aSPSkG~i~~~~-dp~~~A~~y~~~GA~~IsVl-td~~~f---~Gs~~~L~~ir~~v~lPVl~Kdfi~d~~-qi~ea~~~ 141 (272)
T 3tsm_A 68 ASPSKGLIRPDF-DPPALAKAYEEGGAACLSVL-TDTPSF---QGAPEFLTAARQACSLPALRKDFLFDPY-QVYEARSW 141 (272)
T ss_dssp EETTTEESCSSC-CHHHHHHHHHHTTCSEEEEE-CCSTTT---CCCHHHHHHHHHTSSSCEEEESCCCSTH-HHHHHHHT
T ss_pred CCCCCCccCCCC-CHHHHHHHHHHCCCCEEEEe-cccccc---CCCHHHHHHHHHhcCCCEEECCccCCHH-HHHHHHHc
Confidence 5787 355554 77788889999999999983 243332 2367788899988888986544456665 46678899
Q ss_pred CCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCCCCccchhHHHHHHHH
Q 023494 138 GADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDL 216 (281)
Q Consensus 138 GAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~l 216 (281)
|||.|.+-....+.+++.++++.+++.|+.+-+.++ ..++++..+. .+|+|.+-.. .. ..|.+. ++...++
T Consensus 142 GAD~VlLi~a~L~~~~l~~l~~~a~~lGl~~lvevh---~~eEl~~A~~~ga~iIGinnr--~l--~t~~~d-l~~~~~L 213 (272)
T 3tsm_A 142 GADCILIIMASVDDDLAKELEDTAFALGMDALIEVH---DEAEMERALKLSSRLLGVNNR--NL--RSFEVN-LAVSERL 213 (272)
T ss_dssp TCSEEEEETTTSCHHHHHHHHHHHHHTTCEEEEEEC---SHHHHHHHTTSCCSEEEEECB--CT--TTCCBC-THHHHHH
T ss_pred CCCEEEEcccccCHHHHHHHHHHHHHcCCeEEEEeC---CHHHHHHHHhcCCCEEEECCC--CC--ccCCCC-hHHHHHH
Confidence 999999988765445788999999999999998885 4444554444 5898855322 22 223222 4555566
Q ss_pred HHHhhhcCCCCeEEEecCC-ChhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHH
Q 023494 217 RRMCLEKGVNPWIEVDGGV-GPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKT 272 (281)
Q Consensus 217 r~l~~~~~~~~~I~VDGGI-~~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~ 272 (281)
.+.++. +.++..-||| +++++..+.++|+|.|++|++|++++||.+++++|..
T Consensus 214 ~~~ip~---~~~vIaesGI~t~edv~~l~~~Ga~gvLVG~almr~~d~~~~~~~l~~ 267 (272)
T 3tsm_A 214 AKMAPS---DRLLVGESGIFTHEDCLRLEKSGIGTFLIGESLMRQHDVAAATRALLT 267 (272)
T ss_dssp HHHSCT---TSEEEEESSCCSHHHHHHHHTTTCCEEEECHHHHTSSCHHHHHHHHHH
T ss_pred HHhCCC---CCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHcCCcCHHHHHHHHHh
Confidence 666543 4678889999 6999999999999999999999999999999998875
No 52
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=99.49 E-value=1.8e-13 Score=120.57 Aligned_cols=184 Identities=17% Similarity=0.143 Sum_probs=121.1
Q ss_pred EEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccc-cCCHHHHHHcCcCCCCCeeEEEEecChhhH----HHHHHH
Q 023494 62 PSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNI-TIGPLVVDALRPVTDLPLDVHLMIVEPEQR----VPDFIK 136 (281)
Q Consensus 62 pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~-~~G~~~I~~ir~~t~~~idaHLmv~dp~~~----i~~~~~ 136 (281)
+-++|+|+....+.++.+.. .++++.+ | .+.+ .+|++.+++|++..++++.+|+|..|.... ++.+.+
T Consensus 3 ~livALD~~~al~l~~~l~~-~v~~~Kv----G--~~l~~~~G~~~v~~L~~~~g~~VflDlK~~DIpnTv~~a~~~~~~ 75 (215)
T 3ve9_A 3 RVILSLDSPIPEETLRKLNG-KVAGIKV----G--WPLLLNLGKEKVKELVGLVDGIKILDLKLADIDNTMILIVDELKD 75 (215)
T ss_dssp CEEEEESSCCCHHHHHHHHT-TSSEEEE----E--HHHHHHHCHHHHHHHHTTCCSEEEEEEEECSCHHHHHHHHHHHTT
T ss_pred CeEEECCHHHHHHHHHHhCC-cCcEEEe----c--HHHHHhhCHHHHHHHHHhcCCcEEEEecccCchhHHHHHHHHHHH
Confidence 34788998333344444443 3667666 3 2433 789999999988558999999999998754 356678
Q ss_pred cCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCC------HHHHHHhhcc--CCEEEEEeecCCCCCCccchh
Q 023494 137 AGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATS------LSAIECVLDV--VDLVLIMSVNPGFGGQSFIES 208 (281)
Q Consensus 137 aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~------ie~~~~~l~~--vD~IlvmsV~pG~~GQ~f~~~ 208 (281)
. +|++|+|.-....+.++.+ +.|..+-+..+.+.+ ++.+.++... +|-+.. ++ ..|
T Consensus 76 ~-ad~vTvh~~~G~~~~~~~~-----~~~~~v~vLts~s~~~~~~~~v~~~a~~a~~~G~~GvV~-------sa--t~~- 139 (215)
T 3ve9_A 76 I-TNSFIAHAFVGVEGSLASL-----SQRVDLFLVLSMSHPGWNDAFYPYLREVARRVNPKGFVA-------PA--TRP- 139 (215)
T ss_dssp T-CSEEEEEGGGCTTTTHHHH-----HHHSEEEEECCCSSTTCCGGGHHHHHHHHHHHCCSEEEC-------CT--TSH-
T ss_pred h-hheEEEeCCCCcHHHHHhH-----hcCCCEEEEEecCCcchHHHHHHHHHHHHHHcCCCceee-------CC--CCH-
Confidence 8 9999999875203345444 234444433333322 1222222222 332221 11 113
Q ss_pred HHHHHHHHHHHhhhcCCCCeEEEecCCChh--cHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhcC
Q 023494 209 QVKKISDLRRMCLEKGVNPWIEVDGGVGPK--NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKR 275 (281)
Q Consensus 209 ~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e--~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~~ 275 (281)
+.++.+|+..+ + .+.|+|||+++ ++.+++++|+|.+|+||+||+++||.++++++++.++
T Consensus 140 --~e~~~ir~~~~----~-f~~v~pGI~~~g~~~~~a~~~Gad~iVvGr~I~~a~dp~~a~~~i~~~i~ 201 (215)
T 3ve9_A 140 --SMISRVKGDFP----D-KLVISPGVGTQGAKPGIALCHGADYEIVGRSVYQSADPVRKLEEIVRSQE 201 (215)
T ss_dssp --HHHHHHHHHCT----T-SEEEECCTTSTTCCTTHHHHTTCSEEEECHHHHTSSSHHHHHHHHHHHHH
T ss_pred --HHHHHHHHhCC----C-cEEEcCCCCcCcCCHHHHHHcCCCEEEeCHHHcCCCCHHHHHHHHHHHHH
Confidence 34455566543 2 36799999999 9999999999999999999999999999999987654
No 53
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=99.47 E-value=4.7e-14 Score=129.13 Aligned_cols=190 Identities=15% Similarity=0.160 Sum_probs=124.3
Q ss_pred HHHHHHHHHcCCCeEEEEeeeCccccc---------ccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEE
Q 023494 73 GEQVKAVELAGCDWIHVDVMDGRFVPN---------ITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVS 143 (281)
Q Consensus 73 ~~~l~~l~~~G~d~iHiDImDG~fvpn---------~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~It 143 (281)
.+.++.+.++|++++|+- ++ +|. ..-.++.++++++.++.|+.+.....+ .+.++.+.++|||+|.
T Consensus 31 ~~~a~~~~~~Ga~~i~~~--e~--v~~~~~~~~G~~~~~~~~~i~~i~~~~~~Pvi~~~~~~~-~~~~~~~~~aGad~v~ 105 (297)
T 2zbt_A 31 PEQAVIAEEAGAVAVMAL--ER--VPADIRAQGGVARMSDPKIIKEIMAAVSIPVMAKVRIGH-FVEAMILEAIGVDFID 105 (297)
T ss_dssp HHHHHHHHHHTCSEEEEC--SS--CHHHHHHTTCCCCCCCHHHHHHHHTTCSSCEEEEEETTC-HHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHCCCcEEEec--cc--cchHHHhhcCCccCCCHHHHHHHHHhcCCCeEEEeccCC-HHHHHHHHHCCCCEEe
Confidence 466778889999999872 21 221 112578899998888889877655554 4578889999999996
Q ss_pred EcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCCEEEEEeecCCCC----------------------
Q 023494 144 VHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFG---------------------- 201 (281)
Q Consensus 144 vh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG~~---------------------- 201 (281)
.+... ++.++++.+++.+..+.+.....++-+.....-..+|+|.+.. +.|++
T Consensus 106 ~~~~~----~~~~~~~~~~~~~~~i~l~~~v~~~~~~~~a~~~Gad~I~v~G-~~~~g~~~e~~~~~~~~~~~i~~~~g~ 180 (297)
T 2zbt_A 106 ESEVL----TPADEEHHIDKWKFKVPFVCGARNLGEALRRIAEGAAMIRTKG-EAGTGNVVEAVRHARTMWKEIRYVQSL 180 (297)
T ss_dssp EETTS----CCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHTTCSEEEECC-CSSSCCTHHHHHHHHHHHHHHHHHHHS
T ss_pred eeCCC----ChHHHHHHHHHhCCCceEEeecCCHHHHHHHHHcCCCEEEEcc-cccCcchHHHHhhHHHHHHHHHHcCCc
Confidence 65432 1223445555553334444322344444433333589986531 11211
Q ss_pred -CCc------cchhHHHHHHHHHHHhhhcCCCCeEEEecCC-ChhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHh
Q 023494 202 -GQS------FIESQVKKISDLRRMCLEKGVNPWIEVDGGV-GPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTS 273 (281)
Q Consensus 202 -GQ~------f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI-~~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~ 273 (281)
+.. ..+..+++++++++.. +..+.++++||| +++++..+.++|||.+++||+||+++||.+.+++|++.
T Consensus 181 t~~~~~~~~~~~~~~~~~i~~l~~~~---~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvGsai~~~~dp~~~~~~l~~~ 257 (297)
T 2zbt_A 181 REDELMAYAKEIGAPFELVKWVHDHG---RLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIFKSGDPRKRARAIVRA 257 (297)
T ss_dssp CGGGHHHHHHHHTCCHHHHHHHHHHS---SCSSCEEBCSSCCSHHHHHHHHHTTCSEEEECGGGGGSSCHHHHHHHHHHH
T ss_pred CCCCchhhhhcchhhHHHHHHHHHhc---CCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEchHHhCCCCHHHHHHHHHHH
Confidence 110 1233467777777653 222223499999 89999999999999999999999999999999999876
Q ss_pred cC
Q 023494 274 KR 275 (281)
Q Consensus 274 ~~ 275 (281)
++
T Consensus 258 i~ 259 (297)
T 2zbt_A 258 VA 259 (297)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 54
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=99.45 E-value=3e-12 Score=115.43 Aligned_cols=187 Identities=17% Similarity=0.185 Sum_probs=137.2
Q ss_pred cCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEccccc
Q 023494 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQS 149 (281)
Q Consensus 70 ~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~ 149 (281)
.+..+..+.++++|+++||+ +-|-.|. .=.++.++.+|+.++.|+.+--.+.|+.+ +..+.++|||+|++...+.
T Consensus 65 ~~p~~~A~~~~~~GA~~isv-lt~~~~f---~G~~~~l~~i~~~v~lPvl~kdfI~d~~q-i~~a~~~GAD~VlL~~~~l 139 (254)
T 1vc4_A 65 VDPVEAALAYARGGARAVSV-LTEPHRF---GGSLLDLKRVREAVDLPLLRKDFVVDPFM-LEEARAFGASAALLIVALL 139 (254)
T ss_dssp CCHHHHHHHHHHTTCSEEEE-ECCCSSS---CCCHHHHHHHHHHCCSCEEEESCCCSHHH-HHHHHHTTCSEEEEEHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEE-ecchhhh---ccCHHHHHHHHHhcCCCEEECCcCCCHHH-HHHHHHcCCCEEEECccch
Confidence 57778888999999999998 2222221 12567788888888899877666677653 5668899999999998765
Q ss_pred ccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCe
Q 023494 150 STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPW 228 (281)
Q Consensus 150 ~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~ 228 (281)
+ +++.++++.+++.|+.+-+.++. .+++...+. .+|+|.+-.++.. .|. ..++..+++++.++..+.+.+
T Consensus 140 ~-~~l~~l~~~a~~lGl~~lvev~~---~~E~~~a~~~gad~IGvn~~~l~----~~~-~dl~~~~~L~~~i~~~~~~~~ 210 (254)
T 1vc4_A 140 G-ELTGAYLEEARRLGLEALVEVHT---ERELEIALEAGAEVLGINNRDLA----TLH-INLETAPRLGRLARKRGFGGV 210 (254)
T ss_dssp G-GGHHHHHHHHHHHTCEEEEEECS---HHHHHHHHHHTCSEEEEESBCTT----TCC-BCTTHHHHHHHHHHHTTCCSE
T ss_pred H-HHHHHHHHHHHHCCCeEEEEECC---HHHHHHHHHcCCCEEEEccccCc----CCC-CCHHHHHHHHHhCccccCCCe
Confidence 5 77899999999999999888863 333333333 4788866544321 121 123445556666543212357
Q ss_pred EEEecCCC-hhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHH
Q 023494 229 IEVDGGVG-PKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIK 271 (281)
Q Consensus 229 I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~ 271 (281)
+..-|||+ ++++..+.+ |+|.+++||+|++++||.+++++|.
T Consensus 211 vIAegGI~s~~dv~~l~~-Ga~gvlVGsAl~~~~d~~~~~~~l~ 253 (254)
T 1vc4_A 211 LVAESGYSRKEELKALEG-LFDAVLIGTSLMRAPDLEAALRELV 253 (254)
T ss_dssp EEEESCCCSHHHHHTTTT-TCSEEEECHHHHTSSCHHHHHHHHH
T ss_pred EEEEcCCCCHHHHHHHHc-CCCEEEEeHHHcCCCCHHHHHHHHh
Confidence 77899999 999999999 9999999999999999999998875
No 55
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=99.33 E-value=3.9e-11 Score=106.24 Aligned_cols=184 Identities=16% Similarity=0.131 Sum_probs=129.9
Q ss_pred eEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcC-CCCCeeEEEEecChhhHHHHHHHc
Q 023494 59 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKA 137 (281)
Q Consensus 59 ~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~-t~~~idaHLmv~dp~~~i~~~~~a 137 (281)
.+.|-+-..|..++.+.++.+.++|++++++...+ ..+.+.++.+++. ++..+.+.. +.++ +.++.+.++
T Consensus 18 ~ii~vir~~~~~~~~~~~~al~~gGv~~iel~~k~-------~~~~~~i~~l~~~~~~l~vgaGt-vl~~-d~~~~A~~a 88 (224)
T 1vhc_A 18 KIVPVIALDNADDILPLADTLAKNGLSVAEITFRS-------EAAADAIRLLRANRPDFLIAAGT-VLTA-EQVVLAKSS 88 (224)
T ss_dssp CEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTS-------TTHHHHHHHHHHHCTTCEEEEES-CCSH-HHHHHHHHH
T ss_pred CeEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeccC-------chHHHHHHHHHHhCcCcEEeeCc-EeeH-HHHHHHHHC
Confidence 47777777888889999999999999999997432 2356678877654 556666665 3344 478889999
Q ss_pred CCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCCEEEEEeecCCCCCCccchhHHHHHHHHH
Q 023494 138 GADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLR 217 (281)
Q Consensus 138 GAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr 217 (281)
|||+++.+... .++++.+|++|...-+-+ .|+-|..+.+...+|||-+ +|. +.. ..++.|+.++
T Consensus 89 GAd~v~~p~~d------~~v~~~ar~~g~~~i~Gv--~t~~e~~~A~~~Gad~vk~---Fpa---~~~--gG~~~lk~l~ 152 (224)
T 1vhc_A 89 GADFVVTPGLN------PKIVKLCQDLNFPITPGV--NNPMAIEIALEMGISAVKF---FPA---EAS--GGVKMIKALL 152 (224)
T ss_dssp TCSEEECSSCC------HHHHHHHHHTTCCEECEE--CSHHHHHHHHHTTCCEEEE---TTT---TTT--THHHHHHHHH
T ss_pred CCCEEEECCCC------HHHHHHHHHhCCCEEecc--CCHHHHHHHHHCCCCEEEE---eeC---ccc--cCHHHHHHHH
Confidence 99999777542 356778888887764333 3444544444446999976 662 111 1255566666
Q ss_pred HHhhhcCCCCeEEEecCCChhcHHHHHHc-CCcEEEEcccccCC-----CCHHHHHHHHHH
Q 023494 218 RMCLEKGVNPWIEVDGGVGPKNAYKVIEA-GANALVAGSAVFGA-----KDYAEAIKGIKT 272 (281)
Q Consensus 218 ~l~~~~~~~~~I~VDGGI~~e~i~~~~~a-GAD~~VvGSaIf~a-----~dp~~~~~~l~~ 272 (281)
..++ ++++.+.||||++|+.+++++ |++.+. ||+|+++ .|+++..+..++
T Consensus 153 ~~~~----~ipvvaiGGI~~~N~~~~l~agga~~v~-gS~i~~~~~i~~~~~~~i~~~a~~ 208 (224)
T 1vhc_A 153 GPYA----QLQIMPTGGIGLHNIRDYLAIPNIVACG-GSWFVEKKLIQSNNWDEIGRLVRE 208 (224)
T ss_dssp TTTT----TCEEEEBSSCCTTTHHHHHTSTTBCCEE-ECGGGCHHHHHTTCHHHHHHHHHH
T ss_pred hhCC----CCeEEEECCcCHHHHHHHHhcCCCEEEE-EchhcCcchhccCCHHHHHHHHHH
Confidence 6543 479999999999999999999 888888 9999974 566554444443
No 56
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=99.33 E-value=2.4e-11 Score=107.84 Aligned_cols=191 Identities=16% Similarity=0.108 Sum_probs=129.1
Q ss_pred cCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEccccc
Q 023494 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQS 149 (281)
Q Consensus 70 ~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~ 149 (281)
.+..+.++.+++.|+|++|+--.++.+.. .....+.++++++.++.|+.+.=-+.++. .++.+.++|||.|++....
T Consensus 31 ~d~~~~a~~~~~~Gad~i~v~d~~~~~~~-~~~~~~~i~~i~~~~~iPvi~~Ggi~~~~-~~~~~~~~Gad~V~lg~~~- 107 (252)
T 1ka9_F 31 GDPVEAARAYDEAGADELVFLDISATHEE-RAILLDVVARVAERVFIPLTVGGGVRSLE-DARKLLLSGADKVSVNSAA- 107 (252)
T ss_dssp TCHHHHHHHHHHHTCSCEEEEECCSSTTC-HHHHHHHHHHHHTTCCSCEEEESSCCSHH-HHHHHHHHTCSEEEECHHH-
T ss_pred CCHHHHHHHHHHcCCCEEEEEcCCccccC-ccccHHHHHHHHHhCCCCEEEECCcCCHH-HHHHHHHcCCCEEEEChHH-
Confidence 36677788899999999988422222211 12234568888887788888866667765 6778888999999999764
Q ss_pred ccccHHHHHHHHHHcC---CcEEEEECC-----------------CCCHHHHHHhhcc-CCEEEEEeecCCCCCCccchh
Q 023494 150 STIHLHRTLNQIKDLG---AKAGVVLNP-----------------ATSLSAIECVLDV-VDLVLIMSVNPGFGGQSFIES 208 (281)
Q Consensus 150 ~~~~i~~~l~~ik~~G---~k~Glai~p-----------------~t~ie~~~~~l~~-vD~IlvmsV~pG~~GQ~f~~~ 208 (281)
..++..+.+..+..| +.+++.... .++.+.++.+.+. ++.|++.++.. .|...-+
T Consensus 108 -l~~p~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~--~g~~~g~- 183 (252)
T 1ka9_F 108 -VRRPELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVELGAGEILLTSMDR--DGTKEGY- 183 (252)
T ss_dssp -HHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHHTCCEEEEEETTT--TTTCSCC-
T ss_pred -HhCcHHHHHHHHHcCCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHHcCCCEEEEecccC--CCCcCCC-
Confidence 233333334444455 346666531 1235555655554 88888765543 2222212
Q ss_pred HHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCCC-CHHHHHHHHHH
Q 023494 209 QVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGAK-DYAEAIKGIKT 272 (281)
Q Consensus 209 ~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a~-dp~~~~~~l~~ 272 (281)
.++.++++++.. ++++.+.|||+ ++++.++.++|+|.+++||++++.+ ++.+..+.+++
T Consensus 184 ~~~~i~~l~~~~-----~ipvia~GGI~~~~d~~~~~~~Gadgv~vgsal~~~~~~~~~~~~~l~~ 244 (252)
T 1ka9_F 184 DLRLTRMVAEAV-----GVPVIASGGAGRMEHFLEAFQAGAEAALAASVFHFGEIPIPKLKRYLAE 244 (252)
T ss_dssp CHHHHHHHHHHC-----SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTSSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHc-----CCCEEEeCCCCCHHHHHHHHHCCCHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 366677777654 47899999999 6999999999999999999999886 88887776654
No 57
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=99.32 E-value=1.5e-11 Score=108.12 Aligned_cols=173 Identities=14% Similarity=0.116 Sum_probs=125.2
Q ss_pred eEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcC-CCCCeeEEEEecChhhHHHHHHHc
Q 023494 59 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKA 137 (281)
Q Consensus 59 ~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~-t~~~idaHLmv~dp~~~i~~~~~a 137 (281)
.+.|-+-..|..++.+.++.+.++|++++++...+ ..+.+.++.+++. ++..+.+.. +.++ +.++.+.++
T Consensus 17 ~~i~v~r~~~~~~~~~~~~al~~gGv~~iel~~k~-------~~~~~~i~~l~~~~~~~~vgagt-vi~~-d~~~~A~~a 87 (214)
T 1wbh_A 17 PVVPVIVVKKLEHAVPMAKALVAGGVRVLNVTLRT-------ECAVDAIRAIAKEVPEAIVGAGT-VLNP-QQLAEVTEA 87 (214)
T ss_dssp SEEEEECCSSGGGHHHHHHHHHHTTCCEEEEESCS-------TTHHHHHHHHHHHCTTSEEEEES-CCSH-HHHHHHHHH
T ss_pred CEEEEEECCCHHHHHHHHHHHHHcCCCEEEEeCCC-------hhHHHHHHHHHHHCcCCEEeeCE-EEEH-HHHHHHHHc
Confidence 47777777788888899999999999999998433 2345678877654 556666665 4444 378889999
Q ss_pred CCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCCEEEEEeecCCCCCCccchhHHHHHHHHH
Q 023494 138 GADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLR 217 (281)
Q Consensus 138 GAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr 217 (281)
|||+++.+... .++++..+++|.....-. .|+-|..+.+...+|||-+ +|. +.. ..++.|+.++
T Consensus 88 GAd~v~~p~~d------~~v~~~~~~~g~~~i~G~--~t~~e~~~A~~~Gad~v~~---Fpa---~~~--gG~~~lk~i~ 151 (214)
T 1wbh_A 88 GAQFAISPGLT------EPLLKAATEGTIPLIPGI--STVSELMLGMDYGLKEFKF---FPA---EAN--GGVKALQAIA 151 (214)
T ss_dssp TCSCEEESSCC------HHHHHHHHHSSSCEEEEE--SSHHHHHHHHHTTCCEEEE---TTT---TTT--THHHHHHHHH
T ss_pred CCCEEEcCCCC------HHHHHHHHHhCCCEEEec--CCHHHHHHHHHCCCCEEEE---ecC---ccc--cCHHHHHHHh
Confidence 99999988652 356788888987665543 3444544444456999976 662 111 1245566666
Q ss_pred HHhhhcCCCCeEEEecCCChhcHHHHHHc-CCcEEEEcccccCCC
Q 023494 218 RMCLEKGVNPWIEVDGGVGPKNAYKVIEA-GANALVAGSAVFGAK 261 (281)
Q Consensus 218 ~l~~~~~~~~~I~VDGGI~~e~i~~~~~a-GAD~~VvGSaIf~a~ 261 (281)
..++ ++++...||||++|+.+++++ |++.+. ||+|++++
T Consensus 152 ~~~~----~ipvvaiGGI~~~n~~~~l~agg~~~v~-gS~i~~~~ 191 (214)
T 1wbh_A 152 GPFS----QVRFCPTGGISPANYRDYLALKSVLCIG-GSWLVPAD 191 (214)
T ss_dssp TTCT----TCEEEEBSSCCTTTHHHHHTSTTBSCEE-EGGGSCHH
T ss_pred hhCC----CCeEEEECCCCHHHHHHHHhcCCCeEEE-eccccChh
Confidence 5543 478999999999999999999 888888 99999754
No 58
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.32 E-value=1.3e-11 Score=114.43 Aligned_cols=145 Identities=17% Similarity=0.192 Sum_probs=107.1
Q ss_pred HHHHHcCcCCCCCeeEEEEec----Chh--hHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCH
Q 023494 105 LVVDALRPVTDLPLDVHLMIV----EPE--QRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSL 178 (281)
Q Consensus 105 ~~I~~ir~~t~~~idaHLmv~----dp~--~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~i 178 (281)
+.++++|+.++.|+.++++++ +|. ++++.+.++|+|.|++|... +.++++.+++.|++++..+ .++.
T Consensus 57 ~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g~-----p~~~~~~l~~~gi~vi~~v--~t~~ 129 (328)
T 2gjl_A 57 AEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGND-----PGEHIAEFRRHGVKVIHKC--TAVR 129 (328)
T ss_dssp HHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEESC-----CHHHHHHHHHTTCEEEEEE--SSHH
T ss_pred HHHHHHHHhcCCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcCCC-----cHHHHHHHHHcCCCEEeeC--CCHH
Confidence 346667776778999999997 454 67888999999999999873 2577888999999988655 3333
Q ss_pred HHHHHhhccCCEEEEEeecCC-CCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCC-ChhcHHHHHHcCCcEEEEccc
Q 023494 179 SAIECVLDVVDLVLIMSVNPG-FGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGV-GPKNAYKVIEAGANALVAGSA 256 (281)
Q Consensus 179 e~~~~~l~~vD~IlvmsV~pG-~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI-~~e~i~~~~~aGAD~~VvGSa 256 (281)
+....+...+|+|++.+.++| ..|+ +....++.++++++. .++++.++||| +.+++.+++++|||.+.+||+
T Consensus 130 ~a~~~~~~GaD~i~v~g~~~GG~~G~-~~~~~~~~l~~v~~~-----~~iPviaaGGI~~~~~v~~al~~GAdgV~vGs~ 203 (328)
T 2gjl_A 130 HALKAERLGVDAVSIDGFECAGHPGE-DDIPGLVLLPAAANR-----LRVPIIASGGFADGRGLVAALALGADAINMGTR 203 (328)
T ss_dssp HHHHHHHTTCSEEEEECTTCSBCCCS-SCCCHHHHHHHHHTT-----CCSCEEEESSCCSHHHHHHHHHHTCSEEEESHH
T ss_pred HHHHHHHcCCCEEEEECCCCCcCCCC-ccccHHHHHHHHHHh-----cCCCEEEECCCCCHHHHHHHHHcCCCEEEECHH
Confidence 333333445999998876654 2243 223455666665543 25789999999 589999999999999999999
Q ss_pred ccCCCC
Q 023494 257 VFGAKD 262 (281)
Q Consensus 257 If~a~d 262 (281)
++...+
T Consensus 204 ~~~~~e 209 (328)
T 2gjl_A 204 FLATRE 209 (328)
T ss_dssp HHTSSS
T ss_pred HHcCcc
Confidence 987644
No 59
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=99.32 E-value=2.6e-11 Score=107.47 Aligned_cols=183 Identities=15% Similarity=0.085 Sum_probs=128.9
Q ss_pred eEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcC-CCCCeeEEEEecChhhHHHHHHHc
Q 023494 59 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKA 137 (281)
Q Consensus 59 ~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~-t~~~idaHLmv~dp~~~i~~~~~a 137 (281)
.+.|-+-..|..++.+.++.+.++|++++++...+ ..+.+.++.+++. ++..+.+... .++ +.++.+.++
T Consensus 27 ~ii~V~r~~~~~~~~~~~~al~~gGv~~iel~~k~-------~~~~~~i~~l~~~~~~~~igagtv-l~~-d~~~~A~~a 97 (225)
T 1mxs_A 27 RILPVITIAREEDILPLADALAAGGIRTLEVTLRS-------QHGLKAIQVLREQRPELCVGAGTV-LDR-SMFAAVEAA 97 (225)
T ss_dssp SEEEEECCSCGGGHHHHHHHHHHTTCCEEEEESSS-------THHHHHHHHHHHHCTTSEEEEECC-CSH-HHHHHHHHH
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEecCC-------ccHHHHHHHHHHhCcccEEeeCeE-eeH-HHHHHHHHC
Confidence 37777766788888899999999999999997432 1245677766553 5666666653 343 478889999
Q ss_pred CCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCCEEEEEeecCCCCCCccchh-HHHHHHHH
Q 023494 138 GADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIES-QVKKISDL 216 (281)
Q Consensus 138 GAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~~~-~l~kI~~l 216 (281)
|||+++.+... .++++..+++|....+-. .|+-|..+.+...+|||-+ +|+ + +. .++.|+.+
T Consensus 98 GAd~v~~p~~d------~~v~~~~~~~g~~~i~G~--~t~~e~~~A~~~Gad~vk~---FPa---~---~~~G~~~lk~i 160 (225)
T 1mxs_A 98 GAQFVVTPGIT------EDILEAGVDSEIPLLPGI--STPSEIMMGYALGYRRFKL---FPA---E---ISGGVAAIKAF 160 (225)
T ss_dssp TCSSEECSSCC------HHHHHHHHHCSSCEECEE--CSHHHHHHHHTTTCCEEEE---TTH---H---HHTHHHHHHHH
T ss_pred CCCEEEeCCCC------HHHHHHHHHhCCCEEEee--CCHHHHHHHHHCCCCEEEE---ccC---c---cccCHHHHHHH
Confidence 99999987652 356788888887654433 4554444444446999976 551 1 11 25556666
Q ss_pred HHHhhhcCCCCeEEEecCCChhcHHHHHH-cCCcEEEEcccccCC-----CCHHHHHHHHHH
Q 023494 217 RRMCLEKGVNPWIEVDGGVGPKNAYKVIE-AGANALVAGSAVFGA-----KDYAEAIKGIKT 272 (281)
Q Consensus 217 r~l~~~~~~~~~I~VDGGI~~e~i~~~~~-aGAD~~VvGSaIf~a-----~dp~~~~~~l~~ 272 (281)
+..++ ++++...||||++|+.++++ +|++++. ||+|+++ .|+++..+..++
T Consensus 161 ~~~~~----~ipvvaiGGI~~~N~~~~l~~~Ga~~v~-gSai~~~~~i~~~~~~~i~~~a~~ 217 (225)
T 1mxs_A 161 GGPFG----DIRFCPTGGVNPANVRNYMALPNVMCVG-TTWMLDSSWIKNGDWARIEACSAE 217 (225)
T ss_dssp HTTTT----TCEEEEBSSCCTTTHHHHHHSTTBCCEE-ECTTSCHHHHHTTCHHHHHHHHHH
T ss_pred HhhCC----CCeEEEECCCCHHHHHHHHhccCCEEEE-EchhcCchhhccCCHHHHHHHHHH
Confidence 65543 47999999999999999999 7999999 9999984 556544444443
No 60
>3eww_A Ompdecase, orotidine-5'-phosphate decarboxylase; TIM barrel, unusual catalysis, disease mutati glycosyltransferase, lyase, multifunctional enzyme; HET: U1P; 1.10A {Homo sapiens} PDB: 2qcl_A* 2qcm_A* 3ewu_A* 2qcf_A* 3ex6_A* 3ex4_A* 2qcd_A* 2qcc_A 2qcg_A* 2qch_A* 2qcn_A* 2qce_A* 3ewz_A* 3ex1_A* 3ex2_A* 3ex3_A* 3ex0_A* 3ex5_A* 3l0k_A* 3l0n_A* ...
Probab=99.30 E-value=1.5e-10 Score=104.70 Aligned_cols=180 Identities=14% Similarity=0.114 Sum_probs=117.4
Q ss_pred EEEeccCccCHHHHHHHHHHcC--CCeEEEEeeeCcccccc-cCCHHHHHHcCcC---CCCCeeEEEEecChhhHHHHHH
Q 023494 62 PSILSANFAKLGEQVKAVELAG--CDWIHVDVMDGRFVPNI-TIGPLVVDALRPV---TDLPLDVHLMIVEPEQRVPDFI 135 (281)
Q Consensus 62 pSila~D~~~l~~~l~~l~~~G--~d~iHiDImDG~fvpn~-~~G~~~I~~ir~~---t~~~idaHLmv~dp~~~i~~~~ 135 (281)
+-++++|+.+.++.++.+++.+ +.++.+ | + +.+ .+|++.++.|++. .++++.+|+|..|....+....
T Consensus 33 ~LiVALD~~~~~~al~l~~~l~~~v~~~Kv----G-~-~l~~~~G~~~v~~L~~~a~~~g~~VflDlK~~DIpnTv~~a~ 106 (260)
T 3eww_A 33 NLCLSADVSLARELLQLADALGPSICMLKT----H-V-DILNDFTLDVMKELITLAKCHEFLIFENRKFADIGNTVKKQY 106 (260)
T ss_dssp CEEEECCCSCHHHHHHHHHHHGGGCSEEEE----C-G-GGCTTCCHHHHHHHHHHHHHHTCEEEEEEEECSCHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHhCCCceEEEE----c-H-HHHHHhCHHHHHHHHHHHhhcCCeEEEEeeccccHHHHHHHH
Confidence 4468899999998888877653 555555 3 2 333 8999999999873 5889999999999998877533
Q ss_pred -----H--cCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCH--------HHHHHhhcc----CCEEEEEee
Q 023494 136 -----K--AGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSL--------SAIECVLDV----VDLVLIMSV 196 (281)
Q Consensus 136 -----~--aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~i--------e~~~~~l~~----vD~IlvmsV 196 (281)
+ .|+|++|+|.-.. .+.++.+++..+..++.+-+....+.+- +....+... +|-|.. .
T Consensus 107 ~~a~~~~~~~ad~vTVha~~G-~~~~~aa~~~~~~~~~gv~vLtsms~~g~l~~~~~~e~v~~~A~~~~~g~dGvV~--s 183 (260)
T 3eww_A 107 EGGIFKIASWADLVNAHVVPG-SGVVKGLQEVGLPLHRGCLLIAEMSSTGSLATGDYTRAAVRMAEEHSEFVVGFIS--G 183 (260)
T ss_dssp HCTTTCGGGTCSEEEEESTTC-THHHHHHHHHHTTTTCEEEEECCCCSTTCCCCTHHHHHHHHHHHHTTTTEEEEEC--S
T ss_pred HHHHHhhhccCCEEEEeCCCC-HHHHHHHHHhhcccCCeEEEEEEcCCchhcccCCHHHHHHHHHHhccCCCceEEe--C
Confidence 2 4799999998753 4445555554332333333332222110 111111111 111110 0
Q ss_pred cCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChh-----------cHHHHH-HcCCcEEEEcccccCCCCHH
Q 023494 197 NPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPK-----------NAYKVI-EAGANALVAGSAVFGAKDYA 264 (281)
Q Consensus 197 ~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e-----------~i~~~~-~aGAD~~VvGSaIf~a~dp~ 264 (281)
+ + + ..+.++ +.|..||++. |..+++ ++|+|.+|+||.||+++||.
T Consensus 184 --~---~---------~--------~~~~~f-~~vTPGIr~~~~~~~~~~r~~tp~~a~~~aGad~iVvGR~I~~a~dp~ 240 (260)
T 3eww_A 184 --S---R---------V--------SMKPEF-LHLTPGVQLEAGGDNLGQQYNSPQEVIGKRGSDIIIVGRGIISAADRL 240 (260)
T ss_dssp --S---C---------C--------CCCTTS-EEEECSBCSSSEECTTSCEEBCHHHHHTTSCCSEEEESHHHHTSSCHH
T ss_pred --h---h---------h--------ccCCCc-EEECCCcCCCCCCCccCCCccCHHHHHHhcCCCEEEEChhhcCCCCHH
Confidence 0 0 0 012345 4589999975 688999 99999999999999999999
Q ss_pred HHHHHHHHh
Q 023494 265 EAIKGIKTS 273 (281)
Q Consensus 265 ~~~~~l~~~ 273 (281)
++++++++.
T Consensus 241 ~a~~~~~~~ 249 (260)
T 3eww_A 241 EAAEMYRKA 249 (260)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999874
No 61
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=99.28 E-value=1.2e-10 Score=105.39 Aligned_cols=188 Identities=20% Similarity=0.203 Sum_probs=119.0
Q ss_pred ccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCC-HHHHHHcCcCCCCCeeEEEEecCh-----hh---HHHHHHHc-C
Q 023494 69 FAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIG-PLVVDALRPVTDLPLDVHLMIVEP-----EQ---RVPDFIKA-G 138 (281)
Q Consensus 69 ~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G-~~~I~~ir~~t~~~idaHLmv~dp-----~~---~i~~~~~a-G 138 (281)
+-++++.++.+.++|+|.+.+-+ .|......+ ..+++.+++ +...+..+.+ ++ +.+.+.++ |
T Consensus 22 ~p~~~~~~~~l~~~Gad~ielg~---pr~~~~g~~~~~~~~~l~~-----~~~~~~pn~~~~~~~~~~~~f~~~a~~agg 93 (264)
T 1xm3_A 22 YPSFDIQKEAVAVSESDILTFAV---RRMNIFEASQPNFLEQLDL-----SKYTLLPNTAGASTAEEAVRIARLAKASGL 93 (264)
T ss_dssp SSCHHHHHHHHHHHTCSEEEEET---TSSTTC-------CTTCCG-----GGSEEEEECTTCSSHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHcCCeEEEEcc---cccccCCCCHHHHHHHHHh-----cCCeEcCCccccCCHHHHHHHHHHHHHcCC
Confidence 34777778899999999998853 233111111 123333333 2233333333 32 45566676 5
Q ss_pred CCEEEEccccc-c--cccHHHHHHHHHHc---CCcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCCCCccchhHHH
Q 023494 139 ADIVSVHCEQS-S--TIHLHRTLNQIKDL---GAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVK 211 (281)
Q Consensus 139 Ad~Itvh~Ea~-~--~~~i~~~l~~ik~~---G~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f~~~~l~ 211 (281)
++++.+..-.. + .++..++++.++++ |+.++....|+ .++++...+ ..|+|..+....|.. +... ..+
T Consensus 94 ~~~i~l~i~~d~~~~~~e~~~~~~~a~~~~~~g~~vi~~~~~~--~~~a~~~~~~gad~v~~~~~~~Gt~-~~~~--~~~ 168 (264)
T 1xm3_A 94 CDMIKVEVIGCSRSLLPDPVETLKASEQLLEEGFIVLPYTSDD--VVLARKLEELGVHAIMPGASPIGSG-QGIL--NPL 168 (264)
T ss_dssp CSSEEECCBCCTTTCCBCHHHHHHHHHHHHHTTCCEEEEECSC--HHHHHHHHHHTCSCBEECSSSTTCC-CCCS--CHH
T ss_pred CCeEEEeecCCCcccccchHHHHHHHHHHHCCCeEEEEEcCCC--HHHHHHHHHhCCCEEEECCcccCCC-CCCC--CHH
Confidence 67776653221 1 25677899999998 99998655543 345555544 489984432222322 1121 144
Q ss_pred HHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhc
Q 023494 212 KISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSK 274 (281)
Q Consensus 212 kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~ 274 (281)
.++++++.. ++++.++|||+ ++++.++.++|||.+++||+|++++||.+.+++|++.+
T Consensus 169 ~l~~i~~~~-----~iPviv~gGI~t~eda~~~~~~GAdgViVGSAi~~a~dp~~~~~~l~~~v 227 (264)
T 1xm3_A 169 NLSFIIEQA-----KVPVIVDAGIGSPKDAAYAMELGADGVLLNTAVSGADDPVKMARAMKLAV 227 (264)
T ss_dssp HHHHHHHHC-----SSCBEEESCCCSHHHHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHH
T ss_pred HHHHHHhcC-----CCCEEEEeCCCCHHHHHHHHHcCCCEEEEcHHHhCCCCHHHHHHHHHHHH
Confidence 556666532 47899999997 99999999999999999999999999998888888754
No 62
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=99.26 E-value=2.3e-10 Score=101.63 Aligned_cols=181 Identities=17% Similarity=0.160 Sum_probs=127.2
Q ss_pred ccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEE--------ecChh-hHHHHHHHcCC
Q 023494 69 FAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLM--------IVEPE-QRVPDFIKAGA 139 (281)
Q Consensus 69 ~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLm--------v~dp~-~~i~~~~~aGA 139 (281)
..+..+..+.++++|+..+.+ + +++.++++|+.+++|+..-.+ ..+|. +.++.+.++||
T Consensus 35 ~~~~~~~A~a~~~~Ga~~i~~----~--------~~~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Ga 102 (232)
T 3igs_A 35 PEIVAAMALAAEQAGAVAVRI----E--------GIDNLRMTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAGA 102 (232)
T ss_dssp HHHHHHHHHHHHHTTCSEEEE----E--------SHHHHHHHHTTCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTC
T ss_pred cchHHHHHHHHHHCCCeEEEE----C--------CHHHHHHHHHhcCCCEEEEEeecCCCcceEeCccHHHHHHHHHcCC
Confidence 335666677888999998765 2 478899999998999753222 12232 34677899999
Q ss_pred CEEEEccccc-ccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCCC-CccchhHHHHHHHH
Q 023494 140 DIVSVHCEQS-STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGG-QSFIESQVKKISDL 216 (281)
Q Consensus 140 d~Itvh~Ea~-~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~G-Q~f~~~~l~kI~~l 216 (281)
|.|.+-.... ..+.+.++++.+++.|+.+++.++ ..+..+...+ .+|+|.+ ..-|+.. .+-....++.++++
T Consensus 103 d~V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~---t~eea~~a~~~Gad~Ig~--~~~g~t~~~~~~~~~~~~i~~l 177 (232)
T 3igs_A 103 AIIAVDGTARQRPVAVEALLARIHHHHLLTMADCS---SVDDGLACQRLGADIIGT--TMSGYTTPDTPEEPDLPLVKAL 177 (232)
T ss_dssp SEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECC---SHHHHHHHHHTTCSEEEC--TTTTSSSSSCCSSCCHHHHHHH
T ss_pred CEEEECccccCCHHHHHHHHHHHHHCCCEEEEeCC---CHHHHHHHHhCCCCEEEE--cCccCCCCCCCCCCCHHHHHHH
Confidence 9998765431 135688999999999999888764 4555555444 4899853 1224432 11112245666666
Q ss_pred HHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhcC
Q 023494 217 RRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKR 275 (281)
Q Consensus 217 r~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~~ 275 (281)
++. ++++...|||+ ++++..+.++|||.+++||+|++ |....++|.+.++
T Consensus 178 ~~~------~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsal~~---p~~~~~~~~~~i~ 228 (232)
T 3igs_A 178 HDA------GCRVIAEGRYNSPALAAEAIRYGAWAVTVGSAITR---LEHICGWYNDALK 228 (232)
T ss_dssp HHT------TCCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHC---HHHHHHHHHHHHH
T ss_pred Hhc------CCcEEEECCCCCHHHHHHHHHcCCCEEEEehHhcC---HHHHHHHHHHHHH
Confidence 542 47898999995 99999999999999999999995 6777777776654
No 63
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=99.25 E-value=3.3e-10 Score=100.49 Aligned_cols=179 Identities=18% Similarity=0.241 Sum_probs=126.5
Q ss_pred cCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEE--------ecCh-hhHHHHHHHcCCC
Q 023494 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLM--------IVEP-EQRVPDFIKAGAD 140 (281)
Q Consensus 70 ~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLm--------v~dp-~~~i~~~~~aGAd 140 (281)
....+..+.++++|+..|.+ + +++.++++|+.+++|+..-.+ ..+| .+.++.+.++|||
T Consensus 36 ~~~~~~A~a~~~~Ga~~i~~----~--------~~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad 103 (229)
T 3q58_A 36 EIVAAMAQAAASAGAVAVRI----E--------GIENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGAD 103 (229)
T ss_dssp HHHHHHHHHHHHTTCSEEEE----E--------SHHHHHHHGGGCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCS
T ss_pred chHHHHHHHHHHCCCcEEEE----C--------CHHHHHHHHHhcCCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCC
Confidence 35566667888999998865 2 578899999999999754222 1223 2357778999999
Q ss_pred EEEEccccc-ccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCCCC--ccchhHHHHHHHH
Q 023494 141 IVSVHCEQS-STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQ--SFIESQVKKISDL 216 (281)
Q Consensus 141 ~Itvh~Ea~-~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ--~f~~~~l~kI~~l 216 (281)
.|.+-.... ..+.+.++++.+++.|+.++..++ ..+..+...+ .+|+|.+ ..-|+.+. .+.+ .++.++++
T Consensus 104 ~I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~---t~eea~~a~~~Gad~Ig~--~~~g~t~~~~~~~~-~~~li~~l 177 (229)
T 3q58_A 104 IIAFDASFRSRPVDIDSLLTRIRLHGLLAMADCS---TVNEGISCHQKGIEFIGT--TLSGYTGPITPVEP-DLAMVTQL 177 (229)
T ss_dssp EEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECS---SHHHHHHHHHTTCSEEEC--TTTTSSSSCCCSSC-CHHHHHHH
T ss_pred EEEECccccCChHHHHHHHHHHHHCCCEEEEecC---CHHHHHHHHhCCCCEEEe--cCccCCCCCcCCCC-CHHHHHHH
Confidence 998765421 135688999999999999888764 4555555444 5999853 12244321 2222 35556655
Q ss_pred HHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhcC
Q 023494 217 RRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKR 275 (281)
Q Consensus 217 r~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~~ 275 (281)
++. ++++...|||+ ++++..+.++|||.+++||+|++ |....+++.+.++
T Consensus 178 ~~~------~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsai~~---p~~~~~~f~~~~~ 228 (229)
T 3q58_A 178 SHA------GCRVIAEGRYNTPALAANAIEHGAWAVTVGSAITR---IEHICQWFSHAVK 228 (229)
T ss_dssp HTT------TCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHC---HHHHHHHHHHHHC
T ss_pred HHc------CCCEEEECCCCCHHHHHHHHHcCCCEEEEchHhcC---hHHHHHHHHHHHh
Confidence 532 47899999995 99999999999999999999996 6667777776654
No 64
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=99.22 E-value=3.5e-11 Score=107.67 Aligned_cols=179 Identities=17% Similarity=0.224 Sum_probs=118.6
Q ss_pred EeccCcc--CHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCE
Q 023494 64 ILSANFA--KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADI 141 (281)
Q Consensus 64 ila~D~~--~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~ 141 (281)
+.++|+. ...+.++.+.++|+|.+++.+-+|... .-..+.++++|+ ++.|+.. |...+..+ ++|+|.
T Consensus 12 i~~gDP~~~~t~~~~~~l~~~GaD~ielG~S~Gvt~---~~~~~~v~~ir~-~~~Pivl--m~y~~n~i-----~~G~dg 80 (240)
T 1viz_A 12 VFKLDPNKDLPDEQLEILCESGTDAVIIGGSDGVTE---DNVLRMMSKVRR-FLVPCVL--EVSAIEAI-----VPGFDL 80 (240)
T ss_dssp EEEECTTSCCCHHHHHHHHTSCCSEEEECC----CH---HHHHHHHHHHTT-SSSCEEE--ECSCGGGC-----CSCCSE
T ss_pred EEeeCCCccccHHHHHHHHHcCCCEEEECCCCCCCH---HHHHHHHHHhhC-cCCCEEE--ecCccccc-----cCCCCE
Confidence 4556663 345678999999999999987666322 225678999998 7888886 77653222 789999
Q ss_pred EEEcccccccccHHHH-----HHHHHHcC-----CcEEE----EECCCCC------------HHHHHHhhccC-----CE
Q 023494 142 VSVHCEQSSTIHLHRT-----LNQIKDLG-----AKAGV----VLNPATS------------LSAIECVLDVV-----DL 190 (281)
Q Consensus 142 Itvh~Ea~~~~~i~~~-----l~~ik~~G-----~k~Gl----ai~p~t~------------ie~~~~~l~~v-----D~ 190 (281)
+.+..-. .++-..+ ...++++| ++.-. .++|++. .+++..+.... .+
T Consensus 81 ~iiPdLp--~ee~~~~~~g~~~~a~~~~g~~~~~l~~i~~gy~l~~P~~~~~rl~~~d~~~~~~~~~~~a~~g~~~~~~~ 158 (240)
T 1viz_A 81 YFIPSVL--NSKNADWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSELLQLPI 158 (240)
T ss_dssp EEEEEET--TBSSGGGTTHHHHHHHHHCHHHHHHSCEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCSE
T ss_pred EEEcccC--cccChhhhcchhHHHHHHcCCCCcceeeeecccEEECCCCceEEeeccCCCCCHHHHHHHHHhCcccCCCE
Confidence 9998542 2211223 57789999 77655 7788766 34555554332 46
Q ss_pred EEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCCCCHHHHHHH
Q 023494 191 VLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGAKDYAEAIKG 269 (281)
Q Consensus 191 IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~ 269 (281)
|.+-+ -|..+ ..+.|+++++... +.++.|.|||+ +++++++.+ |||.+|+||++.+ +|++.+++
T Consensus 159 VYl~s--~G~~~------~~~~i~~i~~~~~----~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGSa~v~--~~~~~~~~ 223 (240)
T 1viz_A 159 FYLEY--SGVLG------DIEAVKKTKAVLE----TSTLFYGGGIKDAETAKQYAE-HADVIVVGNAVYE--DFDRALKT 223 (240)
T ss_dssp EEEEC--TTSCC------CHHHHHHHHHTCS----SSEEEEESSCCSHHHHHHHHT-TCSEEEECTHHHH--CHHHHHTH
T ss_pred EEEeC--CCccC------hHHHHHHHHHhcC----CCCEEEEeccCCHHHHHHHHh-CCCEEEEChHHHh--CHHHHHHH
Confidence 64433 34322 3445566665431 46899999999 899999888 9999999999996 45434444
Q ss_pred H
Q 023494 270 I 270 (281)
Q Consensus 270 l 270 (281)
+
T Consensus 224 v 224 (240)
T 1viz_A 224 V 224 (240)
T ss_dssp H
T ss_pred H
Confidence 3
No 65
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.20 E-value=2.1e-10 Score=106.56 Aligned_cols=141 Identities=21% Similarity=0.293 Sum_probs=108.5
Q ss_pred HHHHHcCcCCCCCeeEEEEecCh--hhHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHH
Q 023494 105 LVVDALRPVTDLPLDVHLMIVEP--EQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIE 182 (281)
Q Consensus 105 ~~I~~ir~~t~~~idaHLmv~dp--~~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~ 182 (281)
+.++++|+.++.|+.+.+++.+| .++++.+.++|+|.|.+|... +.++++.+++.|++++..+. +.+...
T Consensus 67 ~~i~~i~~~~~~p~gVnl~~~~~~~~~~~~~~~~~g~d~V~l~~g~-----p~~~~~~l~~~g~~v~~~v~---s~~~a~ 138 (326)
T 3bo9_A 67 KAISELRQKTDKPFGVNIILVSPWADDLVKVCIEEKVPVVTFGAGN-----PTKYIRELKENGTKVIPVVA---SDSLAR 138 (326)
T ss_dssp HHHHHHHTTCSSCEEEEEETTSTTHHHHHHHHHHTTCSEEEEESSC-----CHHHHHHHHHTTCEEEEEES---SHHHHH
T ss_pred HHHHHHHHhcCCCEEEEEeccCCCHHHHHHHHHHCCCCEEEECCCC-----cHHHHHHHHHcCCcEEEEcC---CHHHHH
Confidence 34666777777899999999766 457888899999999999874 25678889999999988763 555565
Q ss_pred Hhhc-cCCEEEEEeecCCC-CCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccC
Q 023494 183 CVLD-VVDLVLIMSVNPGF-GGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFG 259 (281)
Q Consensus 183 ~~l~-~vD~IlvmsV~pG~-~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~ 259 (281)
...+ .+|+|.+.+.++|. .|+. ..++.+.++++.. ++++.++|||+ .+++.+++++|||.+.+||+++.
T Consensus 139 ~a~~~GaD~i~v~g~~~GG~~G~~---~~~~ll~~i~~~~-----~iPviaaGGI~~~~dv~~al~~GA~gV~vGs~~~~ 210 (326)
T 3bo9_A 139 MVERAGADAVIAEGMESGGHIGEV---TTFVLVNKVSRSV-----NIPVIAAGGIADGRGMAAAFALGAEAVQMGTRFVA 210 (326)
T ss_dssp HHHHTTCSCEEEECTTSSEECCSS---CHHHHHHHHHHHC-----SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHT
T ss_pred HHHHcCCCEEEEECCCCCccCCCc---cHHHHHHHHHHHc-----CCCEEEECCCCCHHHHHHHHHhCCCEEEechHHHc
Confidence 5554 49999998766543 2433 2455556555442 47899999998 99999999999999999999986
Q ss_pred CC
Q 023494 260 AK 261 (281)
Q Consensus 260 a~ 261 (281)
.+
T Consensus 211 ~~ 212 (326)
T 3bo9_A 211 SV 212 (326)
T ss_dssp BS
T ss_pred Cc
Confidence 53
No 66
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=99.19 E-value=2.4e-11 Score=111.82 Aligned_cols=193 Identities=16% Similarity=0.221 Sum_probs=123.4
Q ss_pred cCccCHHHHHHHHHHcCCCeEEEEee-----eCcccc--cccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCC
Q 023494 67 ANFAKLGEQVKAVELAGCDWIHVDVM-----DGRFVP--NITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGA 139 (281)
Q Consensus 67 ~D~~~l~~~l~~l~~~G~d~iHiDIm-----DG~fvp--n~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGA 139 (281)
.|+.+. +..+..+++|++-+ -+. |-.|-. ...-.++.++++|+..++|+.+-..+.. ...++.+.++||
T Consensus 26 ~d~~~~-e~A~~ye~~GA~~l--svLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v~iPvl~k~~i~~-ide~qil~aaGA 101 (297)
T 4adt_A 26 MDVKNV-EQAKIAEKAGAIGV--MILENIPSELRNTDGVARSVDPLKIEEIRKCISINVLAKVRIGH-FVEAQILEELKV 101 (297)
T ss_dssp EEESSH-HHHHHHHHHTCSEE--EECCCCC-----CCCCCCCCCHHHHHHHHTTCCSEEEEEEETTC-HHHHHHHHHTTC
T ss_pred cCCCcH-HHHHHHHHcCCCEE--EEecCCCCcchhcCCcccCCCHHHHHHHHHhcCCCEEEeccCCc-HHHHHHHHHcCC
Confidence 466666 44688999999975 444 222211 1122599999999988899988766655 335666778999
Q ss_pred CEEEEcccccccccHHHHHHHHHH--cCCcEEEEECCCCCHHHHHHh-hccCCEEEEEeecCCCCCC-------------
Q 023494 140 DIVSVHCEQSSTIHLHRTLNQIKD--LGAKAGVVLNPATSLSAIECV-LDVVDLVLIMSVNPGFGGQ------------- 203 (281)
Q Consensus 140 d~Itvh~Ea~~~~~i~~~l~~ik~--~G~k~Glai~p~t~ie~~~~~-l~~vD~IlvmsV~pG~~GQ------------- 203 (281)
|.|. ..+ ..++.++++.+++ .|..+.+.. . ..++.... ...+|+|.+-.. .| +|.
T Consensus 102 D~Id-~s~---~~~~~~li~~i~~~~~g~~vvv~v--~-~~~Ea~~a~~~Gad~I~v~g~-~g-TG~~~~~v~h~~~~~~ 172 (297)
T 4adt_A 102 DMLD-ESE---VLTMADEYNHINKHKFKTPFVCGC--T-NLGEALRRISEGASMIRTKGE-AG-TGNIIEAIKHIRTVNN 172 (297)
T ss_dssp SEEE-EET---TSCCSCSSCCCCGGGCSSCEEEEE--S-SHHHHHHHHHHTCSEEEECCC-TT-SCCCHHHHHHHHHHHH
T ss_pred CEEE-cCC---CCCHHHHHHHHHhcCCCCeEEEEe--C-CHHHHHHHHhCCCCEEEECCC-cC-CCchHHHHHHHHHhhh
Confidence 9992 222 1233445666676 455555444 3 34333333 345898865321 22 231
Q ss_pred --------------cc---chhHHHHHHHHHHHhhhcCCCCeEEEecCC-ChhcHHHHHHcCCcEEEEcccccCCCCHHH
Q 023494 204 --------------SF---IESQVKKISDLRRMCLEKGVNPWIEVDGGV-GPKNAYKVIEAGANALVAGSAVFGAKDYAE 265 (281)
Q Consensus 204 --------------~f---~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI-~~e~i~~~~~aGAD~~VvGSaIf~a~dp~~ 265 (281)
.| ....++.++++++..+ ..+.+.++||| +++++..+.++|||.+++||+||+++||.+
T Consensus 173 eir~l~~~~~d~L~t~~~~~~~~~~ll~~i~~~~~---iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGsai~~a~dp~~ 249 (297)
T 4adt_A 173 EIKYLCSLDESEVYNFAKKLRAPIDLILLTRKLKR---LPVVNFAAGGIATPADAAMCMQLGMDGVFVGSGIFESENPQK 249 (297)
T ss_dssp HHHHHHHSCTTTHHHHHHHHTCCHHHHHHHHHHTS---CSSEEEEESCCCSHHHHHHHHHTTCSCEEESHHHHTSSCHHH
T ss_pred hhhhhccccccccccccccCCCCHHHHHHHHHhcC---CCeEEEecCCCCCHHHHHHHHHcCCCEEEEhHHHHcCCCHHH
Confidence 01 0122455556555432 12223479999 899999999999999999999999999999
Q ss_pred HHHHHHHhcC
Q 023494 266 AIKGIKTSKR 275 (281)
Q Consensus 266 ~~~~l~~~~~ 275 (281)
.+++|++.++
T Consensus 250 ~~~~l~~ai~ 259 (297)
T 4adt_A 250 MASSIVMAVS 259 (297)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999987553
No 67
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.17 E-value=1.6e-10 Score=100.67 Aligned_cols=163 Identities=9% Similarity=0.147 Sum_probs=104.0
Q ss_pred HHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEcccccccc
Q 023494 73 GEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTI 152 (281)
Q Consensus 73 ~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~~~~ 152 (281)
.+.++.+.++|++++++...+. + ...-.+.++.+.+. ..+-+.++| .++.+.++|+|+|++..+.. +
T Consensus 16 ~~~~~~a~~~Gv~~v~lr~k~~---~-~~~~~~~i~~l~~~----~~~~livnd---~~~~A~~~gadgvhl~~~~~--~ 82 (210)
T 3ceu_A 16 DKIITALFEEGLDILHLRKPET---P-AMYSERLLTLIPEK----YHRRIVTHE---HFYLKEEFNLMGIHLNARNP--S 82 (210)
T ss_dssp HHHHHHHHHTTCCEEEECCSSC---C-HHHHHHHHHHSCGG----GGGGEEESS---CTTHHHHTTCSEEECCSSSC--S
T ss_pred HHHHHHHHHCCCCEEEEccCCC---C-HHHHHHHHHHHHHH----hCCeEEEeC---CHHHHHHcCCCEEEECcccc--c
Confidence 3778888899999999963321 1 00011234444332 234445565 55778899999999987742 1
Q ss_pred cHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCCEEEEEeecCCCC--C--CccchhHHHHHHHHHHHhhhcCCCCe
Q 023494 153 HLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFG--G--QSFIESQVKKISDLRRMCLEKGVNPW 228 (281)
Q Consensus 153 ~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG~~--G--Q~f~~~~l~kI~~lr~l~~~~~~~~~ 228 (281)
.. ...+..+|+..+ |+-| +......+|||.+-++.|..+ | ..+ .++.++++++... .+++
T Consensus 83 ~~-------~~~~~~ig~s~~--t~~e-~~~A~~GaDyv~~g~vf~t~sk~~~~~~~---g~~~l~~~~~~~~---~~iP 146 (210)
T 3ceu_A 83 EP-------HDYAGHVSCSCH--SVEE-VKNRKHFYDYVFMSPIYDSISKVNYYSTY---TAEELREAQKAKI---IDSK 146 (210)
T ss_dssp CC-------TTCCSEEEEEEC--SHHH-HHTTGGGSSEEEECCCC---------CCC---CHHHHHHHHHTTC---SSTT
T ss_pred cc-------cccCCEEEEecC--CHHH-HHHHhhCCCEEEECCcCCCCCCCCCCCCC---CHHHHHHHHHhcC---CCCC
Confidence 11 113677787775 3333 333225699999876665432 1 223 3444555554310 2468
Q ss_pred EEEecCCChhcHHHHHHcCCcEEEEcccccCCCCHH
Q 023494 229 IEVDGGVGPKNAYKVIEAGANALVAGSAVFGAKDYA 264 (281)
Q Consensus 229 I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a~dp~ 264 (281)
+..-|||+++|+.+++++||+.+.+||+|++++||.
T Consensus 147 viaiGGI~~~nv~~~~~~Ga~gVav~s~i~~~~d~~ 182 (210)
T 3ceu_A 147 VMALGGINEDNLLEIKDFGFGGAVVLGDLWNKFDAC 182 (210)
T ss_dssp EEEESSCCTTTHHHHHHTTCSEEEESHHHHTTCCTT
T ss_pred EEEECCCCHHHHHHHHHhCCCEEEEhHHhHcCCCHH
Confidence 889999999999999999999999999999988885
No 68
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=99.16 E-value=9.2e-11 Score=107.87 Aligned_cols=191 Identities=16% Similarity=0.177 Sum_probs=119.9
Q ss_pred HHHHHHHHHcCCCeEEE-E---eeeCcccc-cccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEccc
Q 023494 73 GEQVKAVELAGCDWIHV-D---VMDGRFVP-NITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCE 147 (281)
Q Consensus 73 ~~~l~~l~~~G~d~iHi-D---ImDG~fvp-n~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~E 147 (281)
.+.++.++++|+++||+ + ..+..+-- ...-.++.++.+++.++.|+.+...+.. ...++.+.++|||.|. ..+
T Consensus 31 ~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~~~iPv~~k~r~g~-~~~~~~~~a~GAd~V~-~~~ 108 (305)
T 2nv1_A 31 AEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKARIGH-IVEARVLEAMGVDYID-ESE 108 (305)
T ss_dssp HHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHHCSSCEEEEECTTC-HHHHHHHHHHTCSEEE-ECT
T ss_pred HHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHhCCCCEEecccccc-hHHHHHHHHCCCCEEE-Eec
Confidence 46677888899999953 3 01111110 0112478899988777788876554432 2356777889999997 333
Q ss_pred ccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCCEEEEEeecCCC-----------------------CCCc
Q 023494 148 QSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGF-----------------------GGQS 204 (281)
Q Consensus 148 a~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG~-----------------------~GQ~ 204 (281)
..+..++.+.++ .+++|+.+++... +.-+..+.+-..+|+|.+-+ +.|. .+..
T Consensus 109 ~l~~~~~~~~i~-~~~~g~~v~~~~~--~~~e~~~a~~~Gad~V~~~G-~~g~g~~~~~~~h~rt~~~~i~~l~gi~~~~ 184 (305)
T 2nv1_A 109 VLTPADEEFHLN-KNEYTVPFVCGCR--DLGEATRRIAEGASMLRTKG-EPGTGNIVEAVRHMRKVNAQVRKVVAMSEDE 184 (305)
T ss_dssp TSCCSCSSCCCC-GGGCSSCEEEEES--SHHHHHHHHHTTCSEEEECC-CTTSCCTHHHHHHHHHHHHHHHHHHHSCGGG
T ss_pred cCCHHHHHHHHH-HhccCCcEEEEeC--CHHHHHHHHHCCCCEEEecc-ccCccchHHHHhhhhhhhccchhhccccchh
Confidence 222233333444 4567888888774 33343333333589887632 2221 1111
Q ss_pred c------chhHHHHHHHHHHHhhhcCCCCeEE--EecCC-ChhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhc
Q 023494 205 F------IESQVKKISDLRRMCLEKGVNPWIE--VDGGV-GPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSK 274 (281)
Q Consensus 205 f------~~~~l~kI~~lr~l~~~~~~~~~I~--VDGGI-~~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~ 274 (281)
. .+..++.++++++.. ++++. +.||| +++++.++.++|||.+++||++++++||.+.++++++.+
T Consensus 185 ~~~~~~~~~~~~~~i~~i~~~~-----~iPvi~~a~GGI~~~~d~~~~~~~GadgV~vGsai~~~~~p~~~~~~l~~~~ 258 (305)
T 2nv1_A 185 LMTEAKNLGAPYELLLQIKKDG-----KLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFAKAIVEAT 258 (305)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHT-----SCSSCEEBCSCCCSHHHHHHHHHTTCSCEEECGGGGGSSCHHHHHHHHHHHH
T ss_pred hhcccccccccHHHHHHHHHhc-----CCCEEEEeccCCCCHHHHHHHHHcCCCEEEEcHHHHcCCCHHHHHHHHHHHH
Confidence 0 122345555555532 35665 89999 899999999999999999999999999998888888754
No 69
>3g3d_A UMP synthase, uridine 5'-monophosphate synthase; C-terminal domain, orotidine 5'-monophosphate decarboxylase, human, 5-fluoro-6-azido-UMP; HET: 5FU; 1.70A {Homo sapiens} PDB: 3bvj_A* 3mw7_A* 4hib_A* 4hkp_A* 2p1f_A 2eaw_A 3bgg_A* 3bgj_A*
Probab=99.14 E-value=1.7e-09 Score=99.88 Aligned_cols=180 Identities=14% Similarity=0.103 Sum_probs=117.0
Q ss_pred EEEeccCccCHHHHHHHHHHcC--CCeEEEEeeeCcccccc-cCCHHHHHHcCcC---CCCCeeEEEEecChhhHHHHHH
Q 023494 62 PSILSANFAKLGEQVKAVELAG--CDWIHVDVMDGRFVPNI-TIGPLVVDALRPV---TDLPLDVHLMIVEPEQRVPDFI 135 (281)
Q Consensus 62 pSila~D~~~l~~~l~~l~~~G--~d~iHiDImDG~fvpn~-~~G~~~I~~ir~~---t~~~idaHLmv~dp~~~i~~~~ 135 (281)
+-++++|+.+.++.++.+++.+ +.++.+ | .+.+ .+|++.++.|++. .++++.+|+|..|....+....
T Consensus 85 ~LiVALD~~~~~~al~l~~~l~~~v~~vKv----G--~~l~~~~G~~~v~~L~~~a~~~g~~IflDlK~~DIpnTv~~a~ 158 (312)
T 3g3d_A 85 NLCLSADVSLARELLQLADALGPSICMLKT----H--VDILNDFTLDVMKELITLAKCHEFLIFEDRKFADIGNTVKKQY 158 (312)
T ss_dssp CEEEECCCSCHHHHHHHHHHHGGGCSEEEE----C--GGGCTTCCHHHHHHHHHHHHHHTCEEEEEEEECSCHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHhCCCceEEEE----c--HHHHHHhCHHHHHHHHHHHhhCCCEEEEECcccccHHHHHHHH
Confidence 4478899999999888877653 455555 3 2433 8999999999873 5889999999999988776532
Q ss_pred H-------cCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCC-----H---HHHHHhhcc----CCEEEEEee
Q 023494 136 K-------AGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATS-----L---SAIECVLDV----VDLVLIMSV 196 (281)
Q Consensus 136 ~-------aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~-----i---e~~~~~l~~----vD~IlvmsV 196 (281)
+ .|+|++|+|.-.. .+.++.+++..+..++.+-+....+.+ . +....+... +|-|.. .
T Consensus 159 ~~a~~~~a~~aD~vTVHa~~G-~~~m~aa~e~~~~~~~gV~vLtsms~~g~l~~~~~~~~V~~lA~~~~~gldGvVc--s 235 (312)
T 3g3d_A 159 EGGIFKIASWADLVNAHVVPG-SGVVKGLQEVGLPLHRGCLLIAEMSSTGSLATGDYTRAAVRMAEEHSEFVVGFIS--G 235 (312)
T ss_dssp HCTTTCHHHHCSEEEEESTTC-THHHHHHHHHHTTTTCEEEEECCCSSTTCCCCHHHHHHHHHHHHHTTTTEEEEEC--S
T ss_pred HHHHHhhhccCCEEEEccCCC-HHHHHHHHHhhhhcCCeEEEEEecCCccccccCCHHHHHHHHHHhhhCCCCeEEe--C
Confidence 1 3699999998753 444555555433333333333322211 0 111111111 111110 0
Q ss_pred cCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChh-----------cHHHHH-HcCCcEEEEcccccCCCCHH
Q 023494 197 NPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPK-----------NAYKVI-EAGANALVAGSAVFGAKDYA 264 (281)
Q Consensus 197 ~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e-----------~i~~~~-~aGAD~~VvGSaIf~a~dp~ 264 (281)
+ +. ..+.++ +.|..||++. |..+++ ++|+|.+||||.|++++||.
T Consensus 236 --~--------e~------------~~~~df-l~vTPGIrp~~~~~~~g~qv~TP~~Ai~~~GaD~iVVGRpIt~A~dP~ 292 (312)
T 3g3d_A 236 --S--------RV------------SMKPEF-LHLTPGVQLEAGGDNLGQQYNSPQEVIGKRGSDIIIVGRGIISAADRL 292 (312)
T ss_dssp --S--------CC------------CCCTTS-EEEECSBCSSSEECTTSCEEBCHHHHHHTTCCSEEEESHHHHTSSSHH
T ss_pred --h--------hh------------ccCCCe-EEEcCCcCCCcCCCCcCCcccCHHHHHHhCCCCEEEEChhhcCCCCHH
Confidence 0 00 012345 4588999864 477888 99999999999999999999
Q ss_pred HHHHHHHHh
Q 023494 265 EAIKGIKTS 273 (281)
Q Consensus 265 ~~~~~l~~~ 273 (281)
++++++++.
T Consensus 293 ~aa~~i~~~ 301 (312)
T 3g3d_A 293 EAAEMYRKA 301 (312)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999874
No 70
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=99.14 E-value=1.6e-09 Score=96.41 Aligned_cols=184 Identities=13% Similarity=0.106 Sum_probs=133.4
Q ss_pred eEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcC-CCCCeeEEEEecChhhHHHHHHHc
Q 023494 59 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKA 137 (281)
Q Consensus 59 ~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~-t~~~idaHLmv~dp~~~i~~~~~a 137 (281)
.+.|-+-.-|.....+..+.+.++|++++++.... | -+.+.|+++++. ++..+-+.- |-+ .+.++.+.++
T Consensus 35 ~vv~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t----~---~a~e~I~~l~~~~~~~~iGaGT-Vlt-~~~a~~Ai~A 105 (232)
T 4e38_A 35 KVIPVIAIDNAEDIIPLGKVLAENGLPAAEITFRS----D---AAVEAIRLLRQAQPEMLIGAGT-ILN-GEQALAAKEA 105 (232)
T ss_dssp CEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTS----T---THHHHHHHHHHHCTTCEEEEEC-CCS-HHHHHHHHHH
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHCCCCEEEEeCCC----C---CHHHHHHHHHHhCCCCEEeECC-cCC-HHHHHHHHHc
Confidence 58888888899999999999999999999995332 2 356788888874 555455443 344 3478899999
Q ss_pred CCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCCEEEEEeecCCCCCCccchhHHHHHHHHH
Q 023494 138 GADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLR 217 (281)
Q Consensus 138 GAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr 217 (281)
||++|...... .++++.++++|+.+..-+. |+-|....+-..+|+|-+ .|+- .. ..++.|+.++
T Consensus 106 GA~fIvsP~~~------~~vi~~~~~~gi~~ipGv~--TptEi~~A~~~Gad~vK~---FPa~---~~--gG~~~lkal~ 169 (232)
T 4e38_A 106 GATFVVSPGFN------PNTVRACQEIGIDIVPGVN--NPSTVEAALEMGLTTLKF---FPAE---AS--GGISMVKSLV 169 (232)
T ss_dssp TCSEEECSSCC------HHHHHHHHHHTCEEECEEC--SHHHHHHHHHTTCCEEEE---CSTT---TT--THHHHHHHHH
T ss_pred CCCEEEeCCCC------HHHHHHHHHcCCCEEcCCC--CHHHHHHHHHcCCCEEEE---CcCc---cc--cCHHHHHHHH
Confidence 99999876542 3578889999988744443 566656555556999965 5641 11 1345666666
Q ss_pred HHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEcccccC-----CCCHHHHHHHHH
Q 023494 218 RMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFG-----AKDYAEAIKGIK 271 (281)
Q Consensus 218 ~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~-----a~dp~~~~~~l~ 271 (281)
.-++ ++++...|||+++|+.+++++|+..+|+||.++. +.|+++..+..+
T Consensus 170 ~p~p----~ip~~ptGGI~~~n~~~~l~aGa~~~vgGs~l~~~~~i~~~~~~~i~~~a~ 224 (232)
T 4e38_A 170 GPYG----DIRLMPTGGITPSNIDNYLAIPQVLACGGTWMVDKKLVTNGEWDEIARLTR 224 (232)
T ss_dssp TTCT----TCEEEEBSSCCTTTHHHHHTSTTBCCEEECGGGCHHHHHTTCHHHHHHHHH
T ss_pred HHhc----CCCeeeEcCCCHHHHHHHHHCCCeEEEECchhcChHHhhcCCHHHHHHHHH
Confidence 5443 4789999999999999999999999999999996 356654444333
No 71
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=99.14 E-value=5.2e-11 Score=106.12 Aligned_cols=172 Identities=15% Similarity=0.198 Sum_probs=115.1
Q ss_pred EeccCcc--CHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCE
Q 023494 64 ILSANFA--KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADI 141 (281)
Q Consensus 64 ila~D~~--~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~ 141 (281)
+.++|+. ...+.++.+.++|+|.|++.+-+|.. ..--.++++++|+ ++.|+.. |...+..+ ++|+|.
T Consensus 12 it~gDP~~~~t~~~~~~l~~~GaD~IelG~S~g~t---~~~~~~~v~~ir~-~~~Pivl--~~y~~n~i-----~~gvDg 80 (234)
T 2f6u_A 12 ITKLDPDRTNTDEIIKAVADSGTDAVMISGTQNVT---YEKARTLIEKVSQ-YGLPIVV--EPSDPSNV-----VYDVDY 80 (234)
T ss_dssp EEEECTTSCCCHHHHHHHHTTTCSEEEECCCTTCC---HHHHHHHHHHHTT-SCCCEEE--CCSSCCCC-----CCCSSE
T ss_pred EEeeCCCccccHHHHHHHHHcCCCEEEECCCCCCC---HHHHHHHHHHhcC-CCCCEEE--ecCCcchh-----hcCCCE
Confidence 4556663 34567899999999999997755522 2224578899998 7888886 77553212 789999
Q ss_pred EEEccccc-ccccHH--HHHHHH-------HHcC-----CcEEE----EECCCC------------CHHHHHHhhccC--
Q 023494 142 VSVHCEQS-STIHLH--RTLNQI-------KDLG-----AKAGV----VLNPAT------------SLSAIECVLDVV-- 188 (281)
Q Consensus 142 Itvh~Ea~-~~~~i~--~~l~~i-------k~~G-----~k~Gl----ai~p~t------------~ie~~~~~l~~v-- 188 (281)
+.+..--. ...+.. ...+.+ +++| +..-. .++|++ +.++++.+....
T Consensus 81 ~iipdLp~ee~~~~~~g~~~~~~~~~~~~~~~~g~~~~~l~~I~~gYil~~P~~~~~rl~~g~~~~~~e~~~~~a~~g~~ 160 (234)
T 2f6u_A 81 LFVPTVLNSADGDWITGKHAQWVRMHYENLQKFTEIIESEFIQIEGYIVLNPDSAVARVTKALCNIDKELAASYALVGEK 160 (234)
T ss_dssp EEEEEETTBSBGGGTTHHHHHHHHTTGGGHHHHHHHHHSTTEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHHHHH
T ss_pred EEEcccCCCCCHHHHhhhHHHHHHhhhhhHHHcCCcccceeeeecceEEECCCCceEEeecCCCCCCHHHHHHHHHhhhh
Confidence 99985421 011221 111333 7788 76654 788887 556677766542
Q ss_pred ----CEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccC
Q 023494 189 ----DLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFG 259 (281)
Q Consensus 189 ----D~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~ 259 (281)
.+|.+-+ -|.. ...+.|+++++... +.++.|.|||+ +|+++++.+ |||.+|+||++.+
T Consensus 161 ~l~~~~Vyl~~--~G~~------~~~~~i~~i~~~~~----~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVGSa~v~ 223 (234)
T 2f6u_A 161 LFNLPIIYIEY--SGTY------GNPELVAEVKKVLD----KARLFYGGGIDSREKAREMLR-YADTIIVGNVIYE 223 (234)
T ss_dssp TTCCSEEEEEC--TTSC------CCHHHHHHHHHHCS----SSEEEEESCCCSHHHHHHHHH-HSSEEEECHHHHH
T ss_pred hcCCCEEEEeC--CCCc------chHHHHHHHHHhCC----CCCEEEEecCCCHHHHHHHHh-CCCEEEEChHHHh
Confidence 5565433 3432 23455666666531 36899999999 899999988 9999999999985
No 72
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=99.14 E-value=6.3e-10 Score=99.44 Aligned_cols=187 Identities=19% Similarity=0.129 Sum_probs=113.1
Q ss_pred CHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEcccccc
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSS 150 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~~ 150 (281)
+..+.++.+++.|++.||+-=++..+. ......+.++.+++.++.|+.+.--+.++. .++.+.++|||.+.+.....
T Consensus 31 ~~~~~a~~~~~~Ga~~i~v~d~~~~~~-~~g~~~~~i~~i~~~~~iPvi~~ggi~~~~-~i~~~~~~Gad~v~lg~~~~- 107 (266)
T 2w6r_A 31 LLRDWVVEVEKRGAGEILLTSIDRDGT-KSGYDTEMIRFVRPLTTLPIIASGGAGKME-HFLEAFLAGADKALAASVFH- 107 (266)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTSSC-SSCCCHHHHHHHGGGCCSCEEEESCCCSTH-HHHHHHHHTCSEEECCCCC--
T ss_pred CHHHHHHHHHHCCCCEEEEEecCcccC-CCcccHHHHHHHHHhcCCCEEEECCCCCHH-HHHHHHHcCCcHhhhhHHHH-
Confidence 567778889999999999832222111 122346889999887788888755556655 45677789999999987642
Q ss_pred cc--cHHHHHHHHHHcC--C-c--EEEEEC--C---------------CCCHHHHHHhhc-cCCEEEEEeecCCCCCCcc
Q 023494 151 TI--HLHRTLNQIKDLG--A-K--AGVVLN--P---------------ATSLSAIECVLD-VVDLVLIMSVNPGFGGQSF 205 (281)
Q Consensus 151 ~~--~i~~~l~~ik~~G--~-k--~Glai~--p---------------~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f 205 (281)
.. ++..+.+.++..| . + +++... . .++.+.++.+.. .++.|++.++.. .|..+
T Consensus 108 ~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~--~g~~~ 185 (266)
T 2w6r_A 108 FREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEVEKRGAGEILLTSIDR--DGTKS 185 (266)
T ss_dssp -----CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEETTT--TTTCS
T ss_pred hCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHHHHHcCCCEEEEEeecC--CCCcC
Confidence 11 4444555555555 2 3 344331 1 123454455443 388998865543 22221
Q ss_pred chhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCCCC-HHHHHH
Q 023494 206 IESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGAKD-YAEAIK 268 (281)
Q Consensus 206 ~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a~d-p~~~~~ 268 (281)
-+ .++.++++++.. ++++.+.|||+ ++++.++.++|||.+++||+|++.++ +.+..+
T Consensus 186 g~-~~~~i~~l~~~~-----~ipvia~GGI~~~ed~~~~~~~Gadgv~vgsal~~~~~~~~~~~~ 244 (266)
T 2w6r_A 186 GY-DTEMIRFVRPLT-----TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFREIDMRELKE 244 (266)
T ss_dssp CC-CHHHHHHHGGGC-----CSCEEEESCCCSHHHHHHHHHHTCSEEEESTTTC-----------
T ss_pred CC-CHHHHHHHHHHc-----CCCEEEeCCCCCHHHHHHHHHcCCHHHHccHHHHcCCCCHHHHHH
Confidence 11 255566555432 57899999999 69999999999999999999998764 443333
No 73
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=99.12 E-value=5e-09 Score=94.21 Aligned_cols=195 Identities=17% Similarity=0.252 Sum_probs=136.4
Q ss_pred EeEE--EeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHc
Q 023494 60 VSPS--ILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA 137 (281)
Q Consensus 60 i~pS--ila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~a 137 (281)
-||| .+.-|+ +..+..+.++++ +.-|-+ .-|..|. .=+.+-++.+|+.+++|+...=.+-||.. +..+..+
T Consensus 50 aSPSkG~i~~~~-~~~~iA~~y~~~-A~~IsV-lTd~~~F---~gs~~dL~~ir~~v~lPvLrKDfi~~~~q-i~ea~~~ 122 (251)
T 1i4n_A 50 ASPSAGDINADA-SLEDFIRMYDEL-ADAISI-LTEKHYF---KGDPAFVRAARNLTCRPILAKDFYIDTVQ-VKLASSV 122 (251)
T ss_dssp BCSSSCBSCTTC-CHHHHHHHHHHH-CSEEEE-ECCCSSS---CCCTHHHHHHHTTCCSCEEEECCCCSTHH-HHHHHHT
T ss_pred CCCCCCccCCCC-CHHHHHHHHHHh-CCceEE-Eeccccc---CCCHHHHHHHHHhCCCCEEEeeCCCCHHH-HHHHHHc
Confidence 4677 344443 555666666666 665533 3455443 33678899999888888876555566654 5558999
Q ss_pred CCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhc--cCCEEEEEeecCCCCCCccchhHHHHHHH
Q 023494 138 GADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD--VVDLVLIMSVNPGFGGQSFIESQVKKISD 215 (281)
Q Consensus 138 GAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~--~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~ 215 (281)
|||.|.+-....+..++.++++.+++.|+.+-+.++ ..++++..+. .+|+|.+- +.+..+ |... ++...+
T Consensus 123 GAD~ilLi~a~l~~~~l~~l~~~a~~lGl~~lvEv~---~~eE~~~A~~l~g~~iIGin--nr~l~t--~~~d-~~~~~~ 194 (251)
T 1i4n_A 123 GADAILIIARILTAEQIKEIYEAAEELGMDSLVEVH---SREDLEKVFSVIRPKIIGIN--TRDLDT--FEIK-KNVLWE 194 (251)
T ss_dssp TCSEEEEEGGGSCHHHHHHHHHHHHTTTCEEEEEEC---SHHHHHHHHTTCCCSEEEEE--CBCTTT--CCBC-TTHHHH
T ss_pred CCCEEEEecccCCHHHHHHHHHHHHHcCCeEEEEeC---CHHHHHHHHhcCCCCEEEEe--Cccccc--CCCC-HHHHHH
Confidence 999999988764446799999999999999999987 4444554443 47877543 234322 3222 334444
Q ss_pred HHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHh
Q 023494 216 LRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTS 273 (281)
Q Consensus 216 lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~ 273 (281)
+.+.++. +..+..-|||+ ++++..+.++ +|.|++|++|.+++||.+.+++|...
T Consensus 195 l~~~ip~---~~~vIaEsGI~t~edv~~~~~~-a~avLVG~aimr~~d~~~~~~~l~~~ 249 (251)
T 1i4n_A 195 LLPLVPD---DTVVVAESGIKDPRELKDLRGK-VNAVLVGTSIMKAENPRRFLEEMRAW 249 (251)
T ss_dssp HGGGSCT---TSEEEEESCCCCGGGHHHHTTT-CSEEEECHHHHHCSSHHHHHHHHHHH
T ss_pred HHHhCCC---CCEEEEeCCCCCHHHHHHHHHh-CCEEEEcHHHcCCcCHHHHHHHHHhC
Confidence 4444432 34566699997 9999999999 99999999999999999999988764
No 74
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=99.10 E-value=1.1e-10 Score=103.72 Aligned_cols=187 Identities=18% Similarity=0.155 Sum_probs=62.7
Q ss_pred CHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEcccccc
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSS 150 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~~ 150 (281)
+..+.++.+++.|+++||+--.|+.+.. .....+.++++++..+.|+.+-=-+.+|+. ++.+.++|||.|.+..+.
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~~~~~~-~~~~~~~i~~i~~~~~ipvi~~Ggi~~~~~-~~~~l~~Gad~V~ig~~~-- 111 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSIDRDGTK-SGYDTEMIRFVRPLTTLPIIASGGAGKMEH-FLEAFLRGADKVSINTAA-- 111 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTCS-SCCCHHHHHHHGGGCCSCEEEESCCCSHHH-HHHHHHTTCSEECCSHHH--
T ss_pred CHHHHHHHHHHcCCCEEEEEecCcccCC-CcccHHHHHHHHHhCCCCEEEeCCCCCHHH-HHHHHHcCCCeeehhhHH--
Confidence 5667888899999999997544432211 234568899999887888887666677764 666778999999998764
Q ss_pred cccHHHHHHHHHHcCCc---EEEEECC-----------------CCCHHHHHHhhc-cCCEEEEEeecCCCCCCccchhH
Q 023494 151 TIHLHRTLNQIKDLGAK---AGVVLNP-----------------ATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQ 209 (281)
Q Consensus 151 ~~~i~~~l~~ik~~G~k---~Glai~p-----------------~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f~~~~ 209 (281)
..++..+.+..+.+|.. +++.... .+..+..+.+.+ .+|.|.+.++... |.. ....
T Consensus 112 l~dp~~~~~~~~~~g~~~iv~~ld~~~~~~~~~v~~~g~~~~~~~~~~~~a~~~~~~G~~~i~~t~~~~~--g~~-~g~~ 188 (247)
T 3tdn_A 112 VENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRD--GTK-SGYD 188 (247)
T ss_dssp HHCTHHHHHHHHHHC-----------------------------------------------------------------
T ss_pred hhChHHHHHHHHHhCCCcEEEEEEeccCCCCEEEEECCCcccCCCCHHHHHHHHHhcCCCEEEEecccCC--CCc-CCCC
Confidence 23333344444555532 3443321 011222222222 2677777655332 211 1112
Q ss_pred HHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCCCCHHHHHHH
Q 023494 210 VKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGAKDYAEAIKG 269 (281)
Q Consensus 210 l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~ 269 (281)
++.++++++.. ++++.+.|||+ ++++.++.++|||.+++||+|+..+++...+++
T Consensus 189 ~~~~~~i~~~~-----~iPvia~GGI~~~~d~~~~~~~Gad~v~vg~al~~~p~~~~~~~~ 244 (247)
T 3tdn_A 189 TEMIRFVRPLT-----TLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVENPSLITQIAQ 244 (247)
T ss_dssp -------------------------------------------------------------
T ss_pred HHHHHHHHHhC-----CCCEEEECCCCCHHHHHHHHHcCCcHhhccHHHHcCcHHHHHHHH
Confidence 44555555543 36888999998 999999999999999999999998887765543
No 75
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.09 E-value=7.4e-10 Score=102.94 Aligned_cols=141 Identities=19% Similarity=0.274 Sum_probs=106.4
Q ss_pred HHHHHcCcCCCCCeeEEEEecChh--hHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHH
Q 023494 105 LVVDALRPVTDLPLDVHLMIVEPE--QRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIE 182 (281)
Q Consensus 105 ~~I~~ir~~t~~~idaHLmv~dp~--~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~ 182 (281)
+.++.+|+.++.|+.+.+++.+|. +.++.+.++|+|.|.+|... +.++++.+|+.|+++++.+ +..+..+
T Consensus 53 ~~i~~i~~~~~~p~gvnl~~~~~~~~~~~~~a~~~g~d~V~~~~g~-----p~~~i~~l~~~g~~v~~~v---~~~~~a~ 124 (332)
T 2z6i_A 53 ANIDKIKSLTDKPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGAGN-----PSKYMERFHEAGIIVIPVV---PSVALAK 124 (332)
T ss_dssp HHHHHHHHHCCSCEEEEECTTSTTHHHHHHHHHHTTCSEEEECSSC-----GGGTHHHHHHTTCEEEEEE---SSHHHHH
T ss_pred HHHHHHHHhcCCCEEEEecCCCCCHHHHHHHHHHCCCCEEEECCCC-----hHHHHHHHHHcCCeEEEEe---CCHHHHH
Confidence 446666776778999999997764 56788899999999999864 2356788888899998876 3555565
Q ss_pred Hhhc-cCCEEEEEeecCCC-CCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccC
Q 023494 183 CVLD-VVDLVLIMSVNPGF-GGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFG 259 (281)
Q Consensus 183 ~~l~-~vD~IlvmsV~pG~-~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~ 259 (281)
.+.+ .+|+|.+.+.++|. .|+. ..++.++++++.. ++++.++|||+ ++++..+++.|||.+.+||+++.
T Consensus 125 ~~~~~GaD~i~v~g~~~GG~~g~~---~~~~ll~~i~~~~-----~iPViaaGGI~~~~~~~~al~~GAdgV~vGs~~l~ 196 (332)
T 2z6i_A 125 RMEKIGADAVIAEGMEAGGHIGKL---TTMTLVRQVATAI-----SIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVV 196 (332)
T ss_dssp HHHHTTCSCEEEECTTSSEECCSS---CHHHHHHHHHHHC-----SSCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHT
T ss_pred HHHHcCCCEEEEECCCCCCCCCCc---cHHHHHHHHHHhc-----CCCEEEECCCCCHHHHHHHHHcCCCEEEecHHHhc
Confidence 5544 38999987655442 2433 3445566665543 47899999998 99999999999999999999886
Q ss_pred CC
Q 023494 260 AK 261 (281)
Q Consensus 260 a~ 261 (281)
.+
T Consensus 197 ~~ 198 (332)
T 2z6i_A 197 AK 198 (332)
T ss_dssp BT
T ss_pred Cc
Confidence 54
No 76
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=99.09 E-value=7.9e-10 Score=98.43 Aligned_cols=174 Identities=20% Similarity=0.226 Sum_probs=118.1
Q ss_pred eccCccC--HHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEE
Q 023494 65 LSANFAK--LGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIV 142 (281)
Q Consensus 65 la~D~~~--l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~I 142 (281)
..+|+.. -.+.++.+.+.|.|.|.+..-+|....+ -.++++++|+ ++.|+.. |..||..+ ..|+|.+
T Consensus 16 ~~~DPdk~~~~~~l~~~~~~GtDaI~vGgs~gvt~~~---~~~~v~~ik~-~~~Piil--~p~~~~~~-----~~gaD~i 84 (235)
T 3w01_A 16 FKLDPAKHISDDDLDAICMSQTDAIMIGGTDDVTEDN---VIHLMSKIRR-YPLPLVL--EISNIESV-----MPGFDFY 84 (235)
T ss_dssp EEECTTSCCCHHHHHHHHTSSCSEEEECCSSCCCHHH---HHHHHHHHTT-SCSCEEE--ECCCSTTC-----CTTCSEE
T ss_pred EeECCCCcCCHHHHHHHHHcCCCEEEECCcCCcCHHH---HHHHHHHhcC-cCCCEEE--ecCCHHHh-----hcCCCEE
Confidence 3456643 3467777889999999997655532222 3578899998 7788775 99998765 3599999
Q ss_pred EEcccccc-ccc--HHHHHHHHHHcCC-----cEEE----EECCCCCHHH---------HHHhhcc---------CCEEE
Q 023494 143 SVHCEQSS-TIH--LHRTLNQIKDLGA-----KAGV----VLNPATSLSA---------IECVLDV---------VDLVL 192 (281)
Q Consensus 143 tvh~Ea~~-~~~--i~~~l~~ik~~G~-----k~Gl----ai~p~t~ie~---------~~~~l~~---------vD~Il 192 (281)
.|+.--.+ ..+ +..-.+.++++|. ++-. .++|+++.++ .+..... ..+|.
T Consensus 85 l~pslln~~~~~~i~g~~~~a~~~~gl~~~~~e~i~~gYivv~p~s~v~~v~~a~~~~~~e~iaa~A~~a~~~~g~~~vY 164 (235)
T 3w01_A 85 FVPTVLNSTDVAFHNGTLLEALKTYGHSIDFEEVIFEGYVVCNADSKVAKHTKANTDLTTEDLEAYAQMVNHMYRLPVMY 164 (235)
T ss_dssp EEEEETTBSSGGGTTHHHHHHHHHHGGGCCGGGEEEEEEEECCSSSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCCSEEE
T ss_pred EEccccCCCCcchhhhHHHHHHHHcCCCCcccceeeeeEEEECCCCChhhcccCCcCCCHHHHHHHHHHHHHHcCCCEEE
Confidence 99843211 111 2334567899998 6654 7999988774 3333222 25665
Q ss_pred EEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCCCCHH
Q 023494 193 IMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGAKDYA 264 (281)
Q Consensus 193 vmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a~dp~ 264 (281)
+-+ .|..| . .+.|+++|+... +.++.|.|||+ +|+++++.+ |||.+|+||+|++ ||+
T Consensus 165 ~e~--sG~~g---~---~~~v~~ir~~~~----~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGSai~~--~~~ 222 (235)
T 3w01_A 165 IEY--SGIYG---D---VSKVQAVSEHLT----ETQLFYGGGISSEQQATEMAA-IADTIIVGDIIYK--DIK 222 (235)
T ss_dssp EEC--TTSCC---C---HHHHHHHHTTCS----SSEEEEESCCCSHHHHHHHHT-TSSEEEECTHHHH--CHH
T ss_pred Eec--CCCcC---C---HHHHHHHHHhcC----CCCEEEECCcCCHHHHHHHHc-CCCEEEECCceec--CHH
Confidence 533 56544 2 344455554431 46899999998 899999887 9999999999997 554
No 77
>3gdm_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, K93R mutant, lyase, phosphoprotein; 1.60A {Saccharomyces cerevisiae} SCOP: c.1.2.3 PDB: 3gdl_A* 3gdk_A* 3gdt_A* 3gdr_A* 1dqw_A 1dqx_A*
Probab=99.05 E-value=1.1e-08 Score=92.74 Aligned_cols=186 Identities=13% Similarity=0.135 Sum_probs=120.0
Q ss_pred EEEeccCccCHHHHHHHHHHcC--CCeEEEEeeeCcccccc-cCCHH-HHHHcCcC---CCCCeeEEEEecChhhHHHHH
Q 023494 62 PSILSANFAKLGEQVKAVELAG--CDWIHVDVMDGRFVPNI-TIGPL-VVDALRPV---TDLPLDVHLMIVEPEQRVPDF 134 (281)
Q Consensus 62 pSila~D~~~l~~~l~~l~~~G--~d~iHiDImDG~fvpn~-~~G~~-~I~~ir~~---t~~~idaHLmv~dp~~~i~~~ 134 (281)
+-++++|+.+.++.++.+++.+ +.++.+ | + +.+ .+|++ .++.|++. .++++.+|+|..|....+...
T Consensus 31 ~LiVALD~~~~~~al~l~~~l~~~v~~~Kv----G-~-~l~~~~G~~~~v~~L~~l~~~~g~~IflDlK~~DIpnTv~~~ 104 (267)
T 3gdm_A 31 NLCASLDVRTTKELLELVEALGPKICLLKT----H-V-DILTDFSMEGTVKPLKALSAKYNFLLFEDRRFADIGNTVKLQ 104 (267)
T ss_dssp CEEEECCCSCHHHHHHHHHHHGGGCSEEEE----C-G-GGCSSCCTTTTHHHHHHHHHHHTCEEEEEEEECCCHHHHHHH
T ss_pred CEEEEeCcCCHHHHHHHHHHhCCcCcEEEE----C-H-HHHHhcCHHHHHHHHHHHHhhcCCeEEEEeccccchHHHHHH
Confidence 4467899999998888877653 455554 3 2 333 78999 88888753 478999999999998876642
Q ss_pred H-------HcCCCEEEEcccccccccHHHHHHHHHHc---CCcEEEEECCCCC--H------HHHHHhhccC-CEEEEEe
Q 023494 135 I-------KAGADIVSVHCEQSSTIHLHRTLNQIKDL---GAKAGVVLNPATS--L------SAIECVLDVV-DLVLIMS 195 (281)
Q Consensus 135 ~-------~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~---G~k~Glai~p~t~--i------e~~~~~l~~v-D~Ilvms 195 (281)
. ..++|++|+|.-.. .+.+..+++.+++. +..+-+....+.+ + +....+.... +. +.+
T Consensus 105 y~~a~~~~~~~ad~vTVH~~~G-~~~~~aa~~~a~~~~~~~~~lllla~mss~~~l~~~~~~~~v~~~A~~a~~g--~dG 181 (267)
T 3gdm_A 105 YSAGVYRIAEWADITNAHGVVG-PGIVSGLKQAAEEVTKEPRGLLMLAELSCKGSLATGEYTKGTVDIAKSDKDF--VIG 181 (267)
T ss_dssp HHSTTTCHHHHCSEEEEEGGGC-THHHHHHHHHHHHHCCSCCEEEEECSCCSTTCCCCHHHHHHHHHHHTTCTTT--EEE
T ss_pred HHHHHHHHHhhCCEEEEeccCC-HHHHHHHHHHHHhhcccCCCeEEEEEcCCccccccCCHHHHHHHHHHHHhcC--CCe
Confidence 1 22489999998763 55677777777765 4333332221111 1 1222222221 11 111
Q ss_pred ecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChh-----------cHHHHHHcCCcEEEEcccccC-CCCH
Q 023494 196 VNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPK-----------NAYKVIEAGANALVAGSAVFG-AKDY 263 (281)
Q Consensus 196 V~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e-----------~i~~~~~aGAD~~VvGSaIf~-a~dp 263 (281)
+-- ..+ .+. + ..+.++. .|..||+++ |..+.+++|+|.+|||+.|++ ++||
T Consensus 182 vV~--s~~--~~~--------~----~~g~~f~-~vTPGIr~~~~g~~~gdQ~rTP~~Ai~~GaD~iVVGRpI~~~a~dP 244 (267)
T 3gdm_A 182 FIA--QRD--MGG--------R----DEGYDWL-IMTPGVGLDDKGDALGQQYRTVDDVVSTGSDIIIVGRGLFAKGRDA 244 (267)
T ss_dssp EEC--SSC--CCC--------G----GGTCCCE-EEECSEECCCTTCTTGGGSEEHHHHHHTTCSEEEECGGGTSTTCCH
T ss_pred EEe--Ccc--chh--------h----ccCCCCE-EECCCcCCCcCCCccccCCCCHHHHHHcCCCEEEEChhhccCCCCH
Confidence 110 011 111 1 1233454 478999863 788999999999999999999 9999
Q ss_pred HHHHHHHHHh
Q 023494 264 AEAIKGIKTS 273 (281)
Q Consensus 264 ~~~~~~l~~~ 273 (281)
.++++++++.
T Consensus 245 ~~aa~~i~~~ 254 (267)
T 3gdm_A 245 KVEGERYRKA 254 (267)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999874
No 78
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=99.03 E-value=2.2e-09 Score=101.03 Aligned_cols=121 Identities=17% Similarity=0.246 Sum_probs=87.1
Q ss_pred hHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhh-ccCCEEEEEeecCCCCCCc--c
Q 023494 129 QRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVL-DVVDLVLIMSVNPGFGGQS--F 205 (281)
Q Consensus 129 ~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l-~~vD~IlvmsV~pG~~GQ~--f 205 (281)
.+++.+.+.|+|.|++|.... ..+.++.+++.|+++++.++ ..+...... ..+|+|.+-+ ++++|+. +
T Consensus 113 ~~~~~~~~~g~~~V~~~~g~~----~~~~i~~~~~~g~~v~~~v~---t~~~a~~a~~~GaD~i~v~g--~~~GGh~g~~ 183 (369)
T 3bw2_A 113 AKLAVLLDDPVPVVSFHFGVP----DREVIARLRRAGTLTLVTAT---TPEEARAVEAAGADAVIAQG--VEAGGHQGTH 183 (369)
T ss_dssp HHHHHHHHSCCSEEEEESSCC----CHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEEEEC--TTCSEECCCS
T ss_pred HHHHHHHhcCCCEEEEeCCCC----cHHHHHHHHHCCCeEEEECC---CHHHHHHHHHcCCCEEEEeC--CCcCCcCCCc
Confidence 356778899999999998752 24678889999999998774 344444433 3599998743 2232211 1
Q ss_pred ch---------hHHHHHHHHHHHhhhcCCCCeEEEecCC-ChhcHHHHHHcCCcEEEEcccccCCCCH
Q 023494 206 IE---------SQVKKISDLRRMCLEKGVNPWIEVDGGV-GPKNAYKVIEAGANALVAGSAVFGAKDY 263 (281)
Q Consensus 206 ~~---------~~l~kI~~lr~l~~~~~~~~~I~VDGGI-~~e~i~~~~~aGAD~~VvGSaIf~a~dp 263 (281)
.+ ..++.++++++.. ++++.++||| +++++..++++|||.+.+||+++..+++
T Consensus 184 ~~~~~~~~~~~~~~~~l~~i~~~~-----~iPViaaGGI~~~~~~~~~l~~GAd~V~vGs~~~~~~e~ 246 (369)
T 3bw2_A 184 RDSSEDDGAGIGLLSLLAQVREAV-----DIPVVAAGGIMRGGQIAAVLAAGADAAQLGTAFLATDES 246 (369)
T ss_dssp SCCGGGTTCCCCHHHHHHHHHHHC-----SSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTSTTC
T ss_pred ccccccccccccHHHHHHHHHHhc-----CceEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCccc
Confidence 11 1256666666542 4789999999 8999999999999999999999976554
No 79
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=99.00 E-value=9.9e-10 Score=97.44 Aligned_cols=163 Identities=17% Similarity=0.208 Sum_probs=112.2
Q ss_pred HHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEcccccc-cc
Q 023494 74 EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSS-TI 152 (281)
Q Consensus 74 ~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~~-~~ 152 (281)
+.++.+.+.|.|.|.+..-+|... .--.++++++|+ ++.|+.. +..+|..+ -.|||.+.|+.--.+ ..
T Consensus 22 ~~~~~~~~~GtD~i~vGGs~gvt~---~~~~~~v~~ik~-~~~Pvvl--fp~~~~~v-----~~gaD~~l~pslln~~~~ 90 (228)
T 3vzx_A 22 EQLEILCESGTDAVIIGGSDGVTE---DNVLRMMSKVRR-FLVPCVL--EVSAIEAI-----VPGFDLYFIPSVLNSKNA 90 (228)
T ss_dssp THHHHHHTSSCSEEEECCCSCCCH---HHHHHHHHHHTT-SSSCEEE--ECSCGGGC-----CSCCSEEEEEEETTBSSG
T ss_pred HHHHHHHHcCCCEEEECCcCCCCH---HHHHHHHHHhhc-cCCCEEE--eCCCHHHc-----cccCCEEEEeeecCCCCc
Confidence 567778889999999965444221 123567888888 7888775 99998654 369999999843211 11
Q ss_pred c--HHHHHHHHHHcCC-----cEE----EEECCCCCH------------HHHHHhhcc-----CCEEEEEeecCCCCCCc
Q 023494 153 H--LHRTLNQIKDLGA-----KAG----VVLNPATSL------------SAIECVLDV-----VDLVLIMSVNPGFGGQS 204 (281)
Q Consensus 153 ~--i~~~l~~ik~~G~-----k~G----lai~p~t~i------------e~~~~~l~~-----vD~IlvmsV~pG~~GQ~ 204 (281)
+ +..-.+.++++|. ++- +.++|+++. +++..+... .++|.+-. .|..+
T Consensus 91 ~~i~g~~~~a~~~~g~~~~~~e~i~~gYivv~p~s~~~~~~~a~~~~~~e~~~~~a~~a~~~g~~~VYld~--sG~~~-- 166 (228)
T 3vzx_A 91 DWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSELLQLPIFYLEY--SGVLG-- 166 (228)
T ss_dssp GGTTHHHHHHHHHHHHHHHHSCEEEEEEEECCSSSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCSEEEEEC--TTSCC--
T ss_pred chhhhHHHHHHHHcCCCCcccceeeeEEEEECCCCcceeeecccCCCCHHHHHHHHHHHHHcCCCEEEecC--CCCcC--
Confidence 1 2344467888895 543 479999888 677666553 35665432 33322
Q ss_pred cchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCC
Q 023494 205 FIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGA 260 (281)
Q Consensus 205 f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a 260 (281)
. .+.|+++++..+ +.++.|.|||+ +|+++++. +|||.+|+||++++.
T Consensus 167 -~---~~~i~~i~~~~~----~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGSa~v~~ 214 (228)
T 3vzx_A 167 -D---IEAVKKTKAVLE----TSTLFYGGGIKDAETAKQYA-EHADVIVVGNAVYED 214 (228)
T ss_dssp -C---HHHHHHHHHHCS----SSEEEEESSCCSHHHHHHHH-TTCSEEEECTHHHHC
T ss_pred -C---HHHHHHHHHhcC----CCCEEEeCCCCCHHHHHHHH-hCCCEEEEChHHhcC
Confidence 2 445566665541 36899999998 89999987 799999999999973
No 80
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=98.98 E-value=7.9e-09 Score=97.44 Aligned_cols=177 Identities=20% Similarity=0.226 Sum_probs=117.7
Q ss_pred CHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEcccccc
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSS 150 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~~ 150 (281)
+.+-+.....+.|+.++| +++.+ ..-.+.++++|+.++.++.+.+.+.+ .++++.+.++|+|.|+++.....
T Consensus 58 ~~~lA~avA~~GGlgii~-----~~~s~--e~~~~~I~~vk~~~~~pvga~ig~~~-~e~a~~l~eaGad~I~ld~a~G~ 129 (361)
T 3khj_A 58 EHLMAVGMARLGGIGIIH-----KNMDM--ESQVNEVLKVKNSGGLRVGAAIGVNE-IERAKLLVEAGVDVIVLDSAHGH 129 (361)
T ss_dssp SHHHHHHHHHTTCEEEEC-----SSSCH--HHHHHHHHHHHHTTCCCCEEEECTTC-HHHHHHHHHTTCSEEEECCSCCS
T ss_pred cHHHHHHHHHcCCCeEEe-----cCCCH--HHHHHHHHHHHhccCceEEEEeCCCH-HHHHHHHHHcCcCeEEEeCCCCC
Confidence 433333456677887776 22222 12234677777777789999998766 66888999999999998755321
Q ss_pred cccHHHHHHHHHHc-CCcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCC-CC----ccchhHHHHHHHHHHHhhhc
Q 023494 151 TIHLHRTLNQIKDL-GAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFG-GQ----SFIESQVKKISDLRRMCLEK 223 (281)
Q Consensus 151 ~~~i~~~l~~ik~~-G~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~-GQ----~f~~~~l~kI~~lr~l~~~~ 223 (281)
.....+.++.+++. ++.+.+. +. +..+..+.+.+ .+|+|.+ +..||.- .. .+....+..+.++++.....
T Consensus 130 ~~~~~~~i~~i~~~~~~~Vivg-~v-~t~e~A~~l~~aGaD~I~V-G~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~ 206 (361)
T 3khj_A 130 SLNIIRTLKEIKSKMNIDVIVG-NV-VTEEATKELIENGADGIKV-GIGPGSICTTRIVAGVGVPQITAIEKCSSVASKF 206 (361)
T ss_dssp BHHHHHHHHHHHHHCCCEEEEE-EE-CSHHHHHHHHHTTCSEEEE-CSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcCCcEEEc-cC-CCHHHHHHHHHcCcCEEEE-ecCCCcCCCcccccCCCCCcHHHHHHHHHHHhhc
Confidence 23345677777775 7666541 11 34566666655 4999987 6667641 11 11112345566665554332
Q ss_pred CCCCeEEEecCC-ChhcHHHHHHcCCcEEEEcccccCC
Q 023494 224 GVNPWIEVDGGV-GPKNAYKVIEAGANALVAGSAVFGA 260 (281)
Q Consensus 224 ~~~~~I~VDGGI-~~e~i~~~~~aGAD~~VvGSaIf~a 260 (281)
+++|..+||| +.+++.+++++|||.+.+||+++..
T Consensus 207 --~iPVIA~GGI~~~~di~kala~GAd~V~vGs~~~~t 242 (361)
T 3khj_A 207 --GIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGT 242 (361)
T ss_dssp --TCCEEEESCCCSHHHHHHHHHHTCSEEEESTTTTTB
T ss_pred --CCeEEEECCCCCHHHHHHHHHcCCCEEEEChhhhcC
Confidence 4789999999 5999999999999999999999874
No 81
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.96 E-value=3.1e-09 Score=93.91 Aligned_cols=184 Identities=11% Similarity=0.096 Sum_probs=117.6
Q ss_pred CHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEcccccc
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSS 150 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~~ 150 (281)
+..+.++.+++.|+|+||+-=++..+ +......+.++.++ .++.|+.+-=-+.++. .++.+.++|||.|.+....
T Consensus 31 ~~~~~a~~~~~~Gad~i~v~d~~~~~-~~~~~~~~~i~~i~-~~~ipvi~~Ggi~~~~-~~~~~~~~Gad~V~lg~~~-- 105 (241)
T 1qo2_A 31 DPVELVEKLIEEGFTLIHVVDLSNAI-ENSGENLPVLEKLS-EFAEHIQIGGGIRSLD-YAEKLRKLGYRRQIVSSKV-- 105 (241)
T ss_dssp CHHHHHHHHHHTTCCCEEEEEHHHHH-HCCCTTHHHHHHGG-GGGGGEEEESSCCSHH-HHHHHHHTTCCEEEECHHH--
T ss_pred CHHHHHHHHHHcCCCEEEEecccccc-cCCchhHHHHHHHH-hcCCcEEEECCCCCHH-HHHHHHHCCCCEEEECchH--
Confidence 55667788889999999984333211 11233467888888 5667766644445544 5667888999999988764
Q ss_pred cccHHHHHHHHHHcCCc--EEEEECC-------------CCCHHHHHHhhcc-CCEEEEEeecCCCCCCccchhHHHHHH
Q 023494 151 TIHLHRTLNQIKDLGAK--AGVVLNP-------------ATSLSAIECVLDV-VDLVLIMSVNPGFGGQSFIESQVKKIS 214 (281)
Q Consensus 151 ~~~i~~~l~~ik~~G~k--~Glai~p-------------~t~ie~~~~~l~~-vD~IlvmsV~pG~~GQ~f~~~~l~kI~ 214 (281)
..++.. ++.++++|-+ +++.... .++.+..+.+.+. ++.|.+.++.. .|...-+ .++.++
T Consensus 106 l~~p~~-~~~~~~~g~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~--~g~~~g~-~~~~i~ 181 (241)
T 1qo2_A 106 LEDPSF-LKSLREIDVEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLKEYGLEEIVHTEIEK--DGTLQEH-DFSLTK 181 (241)
T ss_dssp HHCTTH-HHHHHTTTCEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHHHTTTCCEEEEEETTH--HHHTCCC-CHHHHH
T ss_pred hhChHH-HHHHHHcCCcEEEEEEecCCEEEECCceecCCCCHHHHHHHHHhCCCCEEEEEeecc--cccCCcC-CHHHHH
Confidence 233322 3333666633 3444420 1344555555443 89888866532 1211111 366677
Q ss_pred HHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHc-----C-CcEEEEcccccCCC-CHHHHHH
Q 023494 215 DLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEA-----G-ANALVAGSAVFGAK-DYAEAIK 268 (281)
Q Consensus 215 ~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~a-----G-AD~~VvGSaIf~a~-dp~~~~~ 268 (281)
++++.. ++++.+-|||+ ++++..+.+. | +|.+++||+|+..+ ++++..+
T Consensus 182 ~l~~~~-----~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgsal~~~~~~~~~~~~ 238 (241)
T 1qo2_A 182 KIAIEA-----EVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGRAFLEGILTVEVMKR 238 (241)
T ss_dssp HHHHHH-----TCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECHHHHTTSSCHHHHHH
T ss_pred HHHHhc-----CCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeHHHHcCCCCHHHHHH
Confidence 777654 36899999999 6999999998 9 99999999999765 4554443
No 82
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=98.95 E-value=3.5e-08 Score=86.77 Aligned_cols=190 Identities=13% Similarity=0.098 Sum_probs=134.1
Q ss_pred CceEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcC-CCCCeeEEEEecChhhHHHHHH
Q 023494 57 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFI 135 (281)
Q Consensus 57 ~~~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~-t~~~idaHLmv~dp~~~i~~~~ 135 (281)
...+.|-+-..|..+.....+.|.++|++.+++. -+...+.+.|+.|++. ++..+-+- -|.+++ -++.+.
T Consensus 12 ~~~vi~Vir~~~~~~a~~~a~al~~gGi~~iEvt-------~~t~~a~~~I~~l~~~~p~~~IGAG-TVlt~~-~a~~ai 82 (217)
T 3lab_A 12 TKPLIPVIVIDDLVHAIPMAKALVAGGVHLLEVT-------LRTEAGLAAISAIKKAVPEAIVGAG-TVCTAD-DFQKAI 82 (217)
T ss_dssp SCSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEE-------TTSTTHHHHHHHHHHHCTTSEEEEE-CCCSHH-HHHHHH
T ss_pred hCCEEEEEEcCCHHHHHHHHHHHHHcCCCEEEEe-------CCCccHHHHHHHHHHHCCCCeEeec-cccCHH-HHHHHH
Confidence 3458888888899899999999999999999983 2234577889999875 55555554 234544 678899
Q ss_pred HcCCCEEEEcccccccccHHHHHHHHHHcCC------cEEEEECCCCCHHHHHHhhccCCEEEEEeecCCCCCCccchhH
Q 023494 136 KAGADIVSVHCEQSSTIHLHRTLNQIKDLGA------KAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQ 209 (281)
Q Consensus 136 ~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~------k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~~~~ 209 (281)
++||+++.-+.. ..++++.++++|+ .+---. .|+-|....+-..+|+|=+ .|+-. .- .
T Consensus 83 ~AGA~fivsP~~------~~evi~~~~~~~v~~~~~~~~~PG~--~TptE~~~A~~~Gad~vK~---FPa~~---~g--G 146 (217)
T 3lab_A 83 DAGAQFIVSPGL------TPELIEKAKQVKLDGQWQGVFLPGV--ATASEVMIAAQAGITQLKC---FPASA---IG--G 146 (217)
T ss_dssp HHTCSEEEESSC------CHHHHHHHHHHHHHCSCCCEEEEEE--CSHHHHHHHHHTTCCEEEE---TTTTT---TT--H
T ss_pred HcCCCEEEeCCC------cHHHHHHHHHcCCCccCCCeEeCCC--CCHHHHHHHHHcCCCEEEE---Ccccc---cc--C
Confidence 999999976654 2367888888876 443333 3555655555556899854 56421 10 2
Q ss_pred HHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEcccccCC-----CCHHHHHHHHHHhcC
Q 023494 210 VKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGA-----KDYAEAIKGIKTSKR 275 (281)
Q Consensus 210 l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a-----~dp~~~~~~l~~~~~ 275 (281)
++-|+.++..++ ++++...||||++|+.+++++|+..++.||.++.. .|+++..+..++..+
T Consensus 147 ~~~lkal~~p~p----~i~~~ptGGI~~~N~~~~l~aGa~~~vgGs~l~~~~~i~~~~~~~i~~~a~~~~~ 213 (217)
T 3lab_A 147 AKLLKAWSGPFP----DIQFCPTGGISKDNYKEYLGLPNVICAGGSWLTESKLLIEGDWNEVTRRASEIVK 213 (217)
T ss_dssp HHHHHHHHTTCT----TCEEEEBSSCCTTTHHHHHHSTTBCCEEESGGGCHHHHHHTCHHHHHHHHHHSCC
T ss_pred HHHHHHHHhhhc----CceEEEeCCCCHHHHHHHHHCCCEEEEEChhhcChhHHhcCCHHHHHHHHHHHHh
Confidence 445666665543 47899999999999999999999999989999853 566655555555444
No 83
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=98.85 E-value=7.1e-08 Score=93.36 Aligned_cols=194 Identities=14% Similarity=0.134 Sum_probs=141.2
Q ss_pred EeEE--EeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHc
Q 023494 60 VSPS--ILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA 137 (281)
Q Consensus 60 i~pS--ila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~a 137 (281)
-||| ++.-|+ +..+..+..+++ +.-|-+ .-|..|. .=+.+-++++|+.++.|+...=.+.||.. +..+..+
T Consensus 57 aSPSkG~i~~~~-~~~~iA~~y~~~-A~~Isv-LTd~~~F---~gs~~dL~~vr~~v~lPvLrKDFI~d~~Q-i~ea~~~ 129 (452)
T 1pii_A 57 ASPSKGVIRDDF-DPARIAAIYKHY-ASAISV-LTDEKYF---QGSFNFLPIVSQIAPQPILCKDFIIDPYQ-IYLARYY 129 (452)
T ss_dssp EETTTEESCSSC-CHHHHHHHHTTT-CSEEEE-ECCSTTT---CCCTTHHHHHHHHCCSCEEEESCCCSHHH-HHHHHHT
T ss_pred CCCCCCccCCCC-CHHHHHHHHHhh-CcEEEE-Eeccccc---CCCHHHHHHHHHhcCCCeEEEeccCCHHH-HHHHHHc
Confidence 5888 455554 666666677766 877654 3455433 23667788888888888866555566654 5558899
Q ss_pred CCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCCCCccchhHHHHHHHH
Q 023494 138 GADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDL 216 (281)
Q Consensus 138 GAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~l 216 (281)
|||.|.+-....+..++.++++.+++.|+.+-+.++ ..++++..+. .+|+|.+ .+.+... |... ++...++
T Consensus 130 GAD~ILLi~a~l~~~~l~~l~~~a~~lgm~~LvEvh---~~eE~~~A~~lga~iIGi--nnr~L~t--~~~d-l~~~~~L 201 (452)
T 1pii_A 130 QADACLLMLSVLDDDQYRQLAAVAHSLEMGVLTEVS---NEEEQERAIALGAKVVGI--NNRDLRD--LSID-LNRTREL 201 (452)
T ss_dssp TCSEEEEETTTCCHHHHHHHHHHHHHTTCEEEEEEC---SHHHHHHHHHTTCSEEEE--ESEETTT--TEEC-THHHHHH
T ss_pred CCCEEEEEcccCCHHHHHHHHHHHHHcCCeEEEEeC---CHHHHHHHHHCCCCEEEE--eCCCCCC--CCCC-HHHHHHH
Confidence 999999988765445799999999999999999986 3444444333 5787754 2334433 3322 5666667
Q ss_pred HHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHH
Q 023494 217 RRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKT 272 (281)
Q Consensus 217 r~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~ 272 (281)
.+.++. +..+..-|||+ ++.+..+.++ +|.|++|++|.+++||.+.+++|..
T Consensus 202 ~~~ip~---~~~vIaEsGI~t~edv~~~~~~-a~avLVGealmr~~d~~~~~~~l~~ 254 (452)
T 1pii_A 202 APKLGH---NVTVISESGINTYAQVRELSHF-ANGFLIGSALMAHDDLHAAVRRVLL 254 (452)
T ss_dssp HHHHCT---TSEEEEESCCCCHHHHHHHTTT-CSEEEECHHHHTCSCHHHHHHHHHH
T ss_pred HHhCCC---CCeEEEECCCCCHHHHHHHHHh-CCEEEEcHHHcCCcCHHHHHHHHHH
Confidence 776653 45677899999 9999999999 9999999999999999999999874
No 84
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=98.83 E-value=4.8e-09 Score=97.25 Aligned_cols=194 Identities=14% Similarity=0.183 Sum_probs=112.6
Q ss_pred EeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHc-CcCCCCCeeEEEEecChhhHHHHHHHcCCCEE
Q 023494 64 ILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDAL-RPVTDLPLDVHLMIVEPEQRVPDFIKAGADIV 142 (281)
Q Consensus 64 ila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~i-r~~t~~~idaHLmv~dp~~~i~~~~~aGAd~I 142 (281)
+++-|+....++.+.++..|+|+| |+.+- ..|. +.+..+ |+..+.+|.+ -..+.++-.... +.||++|
T Consensus 77 V~~K~rig~~~e~qilea~GaD~I--d~s~~-l~p~-----d~~~~i~k~~~~~~~~~--~a~~lgea~r~~-~~Ga~~i 145 (330)
T 2yzr_A 77 VMAKCRIGHTTEALVLEAIGVDMI--DESEV-LTQA-----DPFFHIYKKKFNVPFVC--GARNLGEAVRRI-WEGAAMI 145 (330)
T ss_dssp EEEEEETTCHHHHHHHHHTTCSEE--EEETT-SCCS-----CSSCCCCGGGCSSCEEE--ECSSHHHHHHHH-HHTCSEE
T ss_pred eEEEEeecchHHHHHHHHcCCCEE--ehhcc-CCHH-----HHHHHhhhhhcccchhh--ccccHHHHHHHH-hcCccee
Confidence 344455433567888888999987 64332 2221 111222 2223455555 345655555555 8899999
Q ss_pred EEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHH-hhccCCEE-----------------EEEeecCCCCCCc
Q 023494 143 SVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIEC-VLDVVDLV-----------------LIMSVNPGFGGQS 204 (281)
Q Consensus 143 tvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~-~l~~vD~I-----------------lvmsV~pG~~GQ~ 204 (281)
..|.|+. +..+.+.++.+|.-...+- .+...+.-+.... .-..+||| -+..++|..+-..
T Consensus 146 ~t~ge~g-~~~~ve~v~H~r~~~~~~~-~~s~~~~~El~~~A~~~gadyv~~~~~vt~~~G~~~r~Lg~G~Vf~T~TK~~ 223 (330)
T 2yzr_A 146 RTKGEAG-TGNIVEAVRHMRLMNEAIA-QLQRMTDEEVYGVAKFYANRYAELAKTVREGMGLPATVLENEPIYEGFTLAE 223 (330)
T ss_dssp EECCCTT-SCCTHHHHHHHHHHHHHHH-HHTTSCHHHHHHHHHHHHGGGGHHHHHHHHHTTSCSCCCTTSEEETTEEHHH
T ss_pred eccCCCC-cccchhHHHHHHHHHHHHH-HhccCCHHHHHHHHHHcCCCEeecccchhhhccccccccccccccCCCcccC
Confidence 9999985 6666666555443110000 1222233333221 11236661 1122222221110
Q ss_pred cchhHHHHHHHHHHHhhhcCCCCeE--EEecCC-ChhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhcC
Q 023494 205 FIESQVKKISDLRRMCLEKGVNPWI--EVDGGV-GPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKR 275 (281)
Q Consensus 205 f~~~~l~kI~~lr~l~~~~~~~~~I--~VDGGI-~~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~~ 275 (281)
-.+..++.|+++++.. .+++ ...||| +++++..+.++|+|.+.+||+|++++||.+.+++|++.++
T Consensus 224 ~~~~~lell~~i~~~~-----~IPVV~VAeGGI~Tpeda~~~l~~GaDgV~VGsaI~~a~dP~~aar~l~~ai~ 292 (330)
T 2yzr_A 224 IIDGLYEVLLEVKKLG-----RLPVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFKSENPLERARAIVEATY 292 (330)
T ss_dssp HHHHHHHHHHHHHHHT-----SCSSEEEECSCCCSHHHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHhC-----CCCeEEEEECCCCCHHHHHHHHHcCcCEEeeHHHHhcCCCHHHHHHHHHHHHH
Confidence 1123345666665532 2454 479999 5999999999999999999999999999999999988654
No 85
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=98.82 E-value=1.2e-07 Score=85.14 Aligned_cols=179 Identities=19% Similarity=0.238 Sum_probs=118.6
Q ss_pred CccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcC--CCCCeeEEEEecC-----h-----hhHHHHHH
Q 023494 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV--TDLPLDVHLMIVE-----P-----EQRVPDFI 135 (281)
Q Consensus 68 D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~--t~~~idaHLmv~d-----p-----~~~i~~~~ 135 (281)
+..++.+.++.+.+.|++.+-+ +. ..++.+++. .+.++.+|+--.. + ...++.+.
T Consensus 43 ~~~~~~~~~~~~~~~g~~~i~~---~~----------~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~~~~~v~~a~ 109 (273)
T 2qjg_A 43 GLIDIRKTVNDVAEGGANAVLL---HK----------GIVRHGHRGYGKDVGLIIHLSGGTAISPNPLKKVIVTTVEEAI 109 (273)
T ss_dssp TSSSHHHHHHHHHHHTCSEEEE---CH----------HHHHSCCCSSSCCCEEEEECEECCTTSSSTTCCEECSCHHHHH
T ss_pred chhhHHHHHHHHHhcCCCEEEe---CH----------HHHHHHHHhhcCCCCEEEEEcCCCcCCCCcccchHHHHHHHHH
Confidence 5567778888889999998743 11 234444332 2456777765443 2 34578899
Q ss_pred HcCCCEEEEcc--ccccc----ccHHHHHHHHHHcCCcEEEEECCC-------CCH---HHH-HHhhc-cCCEEEEEeec
Q 023494 136 KAGADIVSVHC--EQSST----IHLHRTLNQIKDLGAKAGVVLNPA-------TSL---SAI-ECVLD-VVDLVLIMSVN 197 (281)
Q Consensus 136 ~aGAd~Itvh~--Ea~~~----~~i~~~l~~ik~~G~k~Glai~p~-------t~i---e~~-~~~l~-~vD~IlvmsV~ 197 (281)
++|||.|-++. -..+. +.+.++.+.++++|+.+-+.+.+. .+. +.+ +...+ .+|+|.+-
T Consensus 110 ~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~--- 186 (273)
T 2qjg_A 110 RMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGADIVKTS--- 186 (273)
T ss_dssp HTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCSEEEEC---
T ss_pred HcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCCEEEEC---
Confidence 99999994442 11111 235677788888899887654210 122 222 22222 38988652
Q ss_pred CCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChhc-------HHHHHHcCCcEEEEcccccCCCCHHHHHHHH
Q 023494 198 PGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKN-------AYKVIEAGANALVAGSAVFGAKDYAEAIKGI 270 (281)
Q Consensus 198 pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~-------i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l 270 (281)
++ ..++.++++++.. ++++.+-|||+.++ +..+.++||+.+.+||+|++++||.+.++++
T Consensus 187 ~~--------~~~~~l~~i~~~~-----~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~i~~~~~~~~~~~~l 253 (273)
T 2qjg_A 187 YT--------GDIDSFRDVVKGC-----PAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAVGRNIFQHDDVVGITRAV 253 (273)
T ss_dssp CC--------SSHHHHHHHHHHC-----SSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEECCHHHHTSSSHHHHHHHH
T ss_pred CC--------CCHHHHHHHHHhC-----CCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEeeHHhhCCCCHHHHHHHH
Confidence 21 2355666666543 36899999999766 8888899999999999999999999999999
Q ss_pred HHhcC
Q 023494 271 KTSKR 275 (281)
Q Consensus 271 ~~~~~ 275 (281)
++.++
T Consensus 254 ~~~~~ 258 (273)
T 2qjg_A 254 CKIVH 258 (273)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87654
No 86
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=98.76 E-value=1.4e-07 Score=86.94 Aligned_cols=189 Identities=13% Similarity=0.043 Sum_probs=117.4
Q ss_pred cCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcC-cCCCCCeeEEEEe---------cC-h---hhHHHHHH
Q 023494 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALR-PVTDLPLDVHLMI---------VE-P---EQRVPDFI 135 (281)
Q Consensus 70 ~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir-~~t~~~idaHLmv---------~d-p---~~~i~~~~ 135 (281)
.++++.+..+.+.|++-+=+ |. .++......-+ ..++.++.++|=- .+ . ..-++.++
T Consensus 48 ~~~k~lv~~~~~~~~~avl~---~~------g~~~~a~~~~~~~~~~~glil~l~~~~~l~~~~~~~~l~~~~~~ve~a~ 118 (304)
T 1to3_A 48 TDFKVNAAKILSPYASAVLL---DQ------QFCYRQAVEQNAVAKSCAMIVAADDFIPGNGIPVDNVVLDKKINAQAVK 118 (304)
T ss_dssp HHHHHHHHHHHGGGCSEEEE---CT------TTTHHHHHHTTCSCTTSEEEEECEEEEEETTEEEEEEEECSSCCHHHHH
T ss_pred hhHHHHHHHHHhcCCCEEEe---CH------HHHHHHhhcccccCCCCcEEEEECCCCCCCCCccchhhccCchhHHHHH
Confidence 46667777777888887633 33 23444333112 2245667776521 11 1 13478899
Q ss_pred HcCCCEEEEcccccc-c------ccHHHHHHHHHHcCCcEEEEECCC--------CC---HH-HHHHhhc-cCCEEEEEe
Q 023494 136 KAGADIVSVHCEQSS-T------IHLHRTLNQIKDLGAKAGVVLNPA--------TS---LS-AIECVLD-VVDLVLIMS 195 (281)
Q Consensus 136 ~aGAd~Itvh~Ea~~-~------~~i~~~l~~ik~~G~k~Glai~p~--------t~---ie-~~~~~l~-~vD~Ilvms 195 (281)
+.|||.|.++.-..+ . .++.++.+.++++|+.+-+.+.+. .+ +. ..+...+ .+|+|-+
T Consensus 119 ~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD~iKv-- 196 (304)
T 1to3_A 119 RDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGADLYKV-- 196 (304)
T ss_dssp HTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCSEEEE--
T ss_pred HcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCCCEEEe--
Confidence 999999996643211 1 467888899999999988865321 11 11 1222223 3898744
Q ss_pred ecCCCCCCccchhHHHHHHHHHHHhhhcCCCCe-EEEecCCChh----cHHHHHHcCCcEEEEcccccCC----CCHHHH
Q 023494 196 VNPGFGGQSFIESQVKKISDLRRMCLEKGVNPW-IEVDGGVGPK----NAYKVIEAGANALVAGSAVFGA----KDYAEA 266 (281)
Q Consensus 196 V~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~-I~VDGGI~~e----~i~~~~~aGAD~~VvGSaIf~a----~dp~~~ 266 (281)
+|+..+.. ..+.++++.+..... -..+ |.+.||++.+ ++..++++|++++++||+||++ +||.+.
T Consensus 197 -~~~~~~~g----~~~~~~~vv~~~~~~-~~~P~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~~~~~~dp~~~ 270 (304)
T 1to3_A 197 -EMPLYGKG----ARSDLLTASQRLNGH-INMPWVILSSGVDEKLFPRAVRVAMEAGASGFLAGRAVWSSVIGLPDTELM 270 (304)
T ss_dssp -CCGGGGCS----CHHHHHHHHHHHHHT-CCSCEEECCTTSCTTTHHHHHHHHHHTTCCEEEESHHHHGGGTTCSCHHHH
T ss_pred -CCCcCCCC----CHHHHHHHHHhcccc-CCCCeEEEecCCCHHHHHHHHHHHHHcCCeEEEEehHHhCccccCCCHHHH
Confidence 44321111 223333333332221 1357 9999999984 5999999999999999999999 999999
Q ss_pred H--------HHHHHhcC
Q 023494 267 I--------KGIKTSKR 275 (281)
Q Consensus 267 ~--------~~l~~~~~ 275 (281)
+ ++|++.+.
T Consensus 271 ~~~~~~~~~~~l~~iv~ 287 (304)
T 1to3_A 271 LRDVSAPKLQRLGEIVD 287 (304)
T ss_dssp HHHTHHHHHHHHHHHHH
T ss_pred HHhhchHHHHHHHHHHh
Confidence 9 88887553
No 87
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=98.76 E-value=7.7e-07 Score=80.24 Aligned_cols=179 Identities=18% Similarity=0.128 Sum_probs=118.1
Q ss_pred CccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecC------h----hhHHHHHHHc
Q 023494 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVE------P----EQRVPDFIKA 137 (281)
Q Consensus 68 D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~d------p----~~~i~~~~~a 137 (281)
...++++.++.+.+.|++.+-++ +.+++..+ ..+.++.+|+-..- | ..-++.+.+.
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v~-------------~~~v~~~~-~~~~~liv~~~~~~~~~g~~~~~~~~~~ve~Ai~~ 104 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVFQ-------------RGIAEKYY-DGSVPLILKLNGKTTLYNGEPVSVANCSVEEAVSL 104 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEEC-------------HHHHHHHC-CSSSCEEEECEECCTTCCSSCCCEESSCHHHHHHT
T ss_pred chhhHHHHHHHHHhhCCCEEEEC-------------HHHHHHhh-cCCCcEEEEEeCCCCcCCCCccchHHHHHHHHHHC
Confidence 35578888888889999887542 33444444 33445555552211 1 1237788999
Q ss_pred CCCEEEEccccc--c----cccHHHHHHHHHHcCCcEEEEECCCC-------CHHHHHH---hhc--cCCEEEEEeecCC
Q 023494 138 GADIVSVHCEQS--S----TIHLHRTLNQIKDLGAKAGVVLNPAT-------SLSAIEC---VLD--VVDLVLIMSVNPG 199 (281)
Q Consensus 138 GAd~Itvh~Ea~--~----~~~i~~~l~~ik~~G~k~Glai~p~t-------~ie~~~~---~l~--~vD~IlvmsV~pG 199 (281)
|||.|-++..-. . .+++.++.+.++++|+++.+...+.- +.+.+.. ... .+|||-+- .||
T Consensus 105 Ga~~v~~~~nig~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~vkt~--~~~ 182 (263)
T 1w8s_A 105 GASAVGYTIYPGSGFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELGADAMKIK--YTG 182 (263)
T ss_dssp TCSEEEEEECTTSTTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCSEEEEE--CCS
T ss_pred CCCEEEEEEecCCcCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCCCEEEEc--CCC
Confidence 999999986211 1 12345666667788999866544410 2233332 222 38998653 231
Q ss_pred CCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChh-------cHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHH
Q 023494 200 FGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPK-------NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKT 272 (281)
Q Consensus 200 ~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e-------~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~ 272 (281)
.++.++++++..+ ..++.+.|||+.+ ++..++++||+.+.+||+||+++||.+.+++|++
T Consensus 183 ---------~~e~~~~~~~~~~----~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~~~dp~~~~~~l~~ 249 (263)
T 1w8s_A 183 ---------DPKTFSWAVKVAG----KVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQRRDALKFARALAE 249 (263)
T ss_dssp ---------SHHHHHHHHHHTT----TSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHTSTTHHHHHHHHHH
T ss_pred ---------CHHHHHHHHHhCC----CCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcCCcCHHHHHHHHHH
Confidence 3455666665542 2378999999976 7888889999999999999999999999999998
Q ss_pred hcC
Q 023494 273 SKR 275 (281)
Q Consensus 273 ~~~ 275 (281)
.+.
T Consensus 250 ~v~ 252 (263)
T 1w8s_A 250 LVY 252 (263)
T ss_dssp HHC
T ss_pred HHh
Confidence 765
No 88
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=98.73 E-value=3e-09 Score=96.35 Aligned_cols=192 Identities=15% Similarity=0.206 Sum_probs=122.7
Q ss_pred cCccCHHHHHHHHHHcCCCeEEEEeeeCccccc-c-cC-------CHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHc
Q 023494 67 ANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPN-I-TI-------GPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA 137 (281)
Q Consensus 67 ~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn-~-~~-------G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~a 137 (281)
.|..+- ++.+.++++|+..+ =+.++ +|. + .+ +|+.|++|++..++|+..-.++-+ ..-.+.+.++
T Consensus 16 mdv~~~-eqa~iae~aGa~av--~~l~~--~p~d~r~~gGv~Rm~dp~~I~~I~~aVsIPVm~k~righ-~~EAqilea~ 89 (291)
T 3o07_A 16 MDVVTP-EQAKIAEKSGACAV--MALES--IPADMRKSGKVCRMSDPKMIKDIMNSVSIPVMAKVRIGH-FVEAQIIEAL 89 (291)
T ss_dssp EEESSH-HHHHHHHHHTCSEE--EECSS--CHHHHHTTTCCCCCCCHHHHHHHHTTCSSCEEEEEETTC-HHHHHHHHHT
T ss_pred eecCCH-HHHHHHHHhCchhh--hhccC--CCchhhhcCCccccCCHHHHHHHHHhCCCCeEEEEecCc-HHHHHHHHHc
Confidence 355454 56788999998754 33444 453 1 33 399999999988899999777666 1224456789
Q ss_pred CCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCH-HHHHHhhccCCEEEEEeecCCCCCC-------------
Q 023494 138 GADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSL-SAIECVLDVVDLVLIMSVNPGFGGQ------------- 203 (281)
Q Consensus 138 GAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~i-e~~~~~l~~vD~IlvmsV~pG~~GQ------------- 203 (281)
|+|+| .|+ ...++.+....+++...++-+ ++.-..+ |.+..+-..+|+|-- +-++|++.-
T Consensus 90 GaD~I---Des-evltpad~~~~I~k~~f~vpf-v~~~~~l~EAlrri~eGA~mIrT-tge~gtg~v~~av~h~r~~~~~ 163 (291)
T 3o07_A 90 EVDYI---DES-EVLTPADWTHHIEKDKFKVPF-VCGAKDLGEALRRINEGAAMIRT-KGEAGTGDVSEAVKHIRRITEE 163 (291)
T ss_dssp TCSEE---EEE-TTSCCSCSSCCCCGGGCSSCE-EEEESSHHHHHHHHHHTCSEEEE-CCCTTSCCTHHHHHHHHHHHHH
T ss_pred CCCEE---ecc-cCCCHHHHHHHhhhhcCCCcE-EeeCCCHHHHHHHHHCCCCEEEe-cCcCCCccHHHHHHHHHHHHHH
Confidence 99999 332 123344445555553333322 2222344 445555556898843 235554321
Q ss_pred -----cc-c-----------hhHHHHHHHHHHHhhhcCCCCeEEE--ecCC-ChhcHHHHHHcCCcEEEEcccccCCCCH
Q 023494 204 -----SF-I-----------ESQVKKISDLRRMCLEKGVNPWIEV--DGGV-GPKNAYKVIEAGANALVAGSAVFGAKDY 263 (281)
Q Consensus 204 -----~f-~-----------~~~l~kI~~lr~l~~~~~~~~~I~V--DGGI-~~e~i~~~~~aGAD~~VvGSaIf~a~dp 263 (281)
.+ . ...++.|+++++.. ++++.+ .||| +++++..+.+.|+|.+.+||+||+++||
T Consensus 164 i~~l~g~~t~~el~~~a~~~~ad~elI~~Ike~~-----~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~s~DP 238 (291)
T 3o07_A 164 IKACQQLKSEDDIAKVAEEMRVPVSLLKDVLEKG-----KLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFKSSNP 238 (291)
T ss_dssp HHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHHT-----SCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGGSSCH
T ss_pred HHHHHcCCCHHHhhhcccccCCCHHHHHHHHHcc-----CCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHhCCCCH
Confidence 01 1 11244455555542 356543 6999 6999999999999999999999999999
Q ss_pred HHHHHHHHHhcC
Q 023494 264 AEAIKGIKTSKR 275 (281)
Q Consensus 264 ~~~~~~l~~~~~ 275 (281)
...++++.+.++
T Consensus 239 ~~~Akafv~Av~ 250 (291)
T 3o07_A 239 VRLATAVVEATT 250 (291)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999988654
No 89
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=98.69 E-value=8.3e-08 Score=87.38 Aligned_cols=161 Identities=17% Similarity=0.183 Sum_probs=106.9
Q ss_pred HHcCc-CCCCCeeEEEEecChhhHHHH---HHH-cCCCEEEEcccccc-----------cccHHHHHHHHHHc-CCcEEE
Q 023494 108 DALRP-VTDLPLDVHLMIVEPEQRVPD---FIK-AGADIVSVHCEQSS-----------TIHLHRTLNQIKDL-GAKAGV 170 (281)
Q Consensus 108 ~~ir~-~t~~~idaHLmv~dp~~~i~~---~~~-aGAd~Itvh~Ea~~-----------~~~i~~~l~~ik~~-G~k~Gl 170 (281)
+.+|+ .++.|+.+.+...++..|.+. +.+ +|+|.|-+|.-+.. ...+.++++++++. ++.+.+
T Consensus 90 ~~~~~~~~~~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~v 169 (311)
T 1ep3_A 90 PWLNENFPELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYV 169 (311)
T ss_dssp HHHHHHCTTSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEE
T ss_pred HHHHhcCCCCcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEE
Confidence 34555 457899999998888876543 344 89999999864310 11247888888887 888888
Q ss_pred EECCCC--CHHHHHHhhc-cCCEEEEEee------cC------------CCCCCccchhHHHHHHHHHHHhhhcCCCCeE
Q 023494 171 VLNPAT--SLSAIECVLD-VVDLVLIMSV------NP------------GFGGQSFIESQVKKISDLRRMCLEKGVNPWI 229 (281)
Q Consensus 171 ai~p~t--~ie~~~~~l~-~vD~IlvmsV------~p------------G~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I 229 (281)
-+.|+. ..+..+.+.+ .+|+|.+... ++ |+.|....+..++.++++++.. +++|
T Consensus 170 k~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~-----~ipv 244 (311)
T 1ep3_A 170 KLSPNVTDIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDV-----DIPI 244 (311)
T ss_dssp EECSCSSCSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTC-----SSCE
T ss_pred EECCChHHHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhc-----CCCE
Confidence 777653 3444444444 3899987321 11 1223333344456666665532 5789
Q ss_pred EEecCC-ChhcHHHHHHcCCcEEEEcccccCCCCH-HHHHHHHHHh
Q 023494 230 EVDGGV-GPKNAYKVIEAGANALVAGSAVFGAKDY-AEAIKGIKTS 273 (281)
Q Consensus 230 ~VDGGI-~~e~i~~~~~aGAD~~VvGSaIf~a~dp-~~~~~~l~~~ 273 (281)
.+.||| +.+++.+++++|||.+.+||+++..++. .+..+.++..
T Consensus 245 ia~GGI~~~~d~~~~l~~GAd~V~vg~~~l~~p~~~~~i~~~l~~~ 290 (311)
T 1ep3_A 245 IGMGGVANAQDVLEMYMAGASAVAVGTANFADPFVCPKIIDKLPEL 290 (311)
T ss_dssp EECSSCCSHHHHHHHHHHTCSEEEECTHHHHCTTHHHHHHHHHHHH
T ss_pred EEECCcCCHHHHHHHHHcCCCEEEECHHHHcCcHHHHHHHHHHHHH
Confidence 999999 5999999999999999999998875543 3334444443
No 90
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=98.66 E-value=2.9e-07 Score=82.85 Aligned_cols=191 Identities=11% Similarity=0.076 Sum_probs=109.5
Q ss_pred eEEEeccCccC------HHHHHHHHHHcC--CCeEEEEeeeCcccccc-cCCHH---HHHHcCcC--CCCCeeEEEEecC
Q 023494 61 SPSILSANFAK------LGEQVKAVELAG--CDWIHVDVMDGRFVPNI-TIGPL---VVDALRPV--TDLPLDVHLMIVE 126 (281)
Q Consensus 61 ~pSila~D~~~------l~~~l~~l~~~G--~d~iHiDImDG~fvpn~-~~G~~---~I~~ir~~--t~~~idaHLmv~d 126 (281)
+|-++++|+.. .+..++.+++.+ +.++-+ | .+.+ .+|++ .++++.+. .++++.+|+|..|
T Consensus 14 ~~LcVgLD~~~~~~~~~~~~~~~lv~~l~~~v~~~Kv----g--~~lf~~~G~~g~~~l~~l~~~~~~g~~VflDlK~~D 87 (255)
T 3qw3_A 14 SLLCVGLDPRAKTAAAAVEECKRLIEQTHEYAAAYKP----N--AAFFEFFGAEGWAALSEVIRAVPAGIPVVLDAKRGD 87 (255)
T ss_dssp CCEEEEECCCCSSHHHHHHHHHHHHHHHGGGCSEEEE----B--HHHHHTTTHHHHHHHHHHHHHSCTTCCBEEEEEECC
T ss_pred CCEEEEeCCCchhcchHHHHHHHHHHHhCCcCcEEEE----c--HHHHHhcCHHHHHHHHHHHHHhcCCCeEEEEeecCC
Confidence 34567788763 333444444332 444444 3 2323 78876 44444331 5789999999999
Q ss_pred hhh----HHHHHH-HcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCH---------------HHHHHhhc
Q 023494 127 PEQ----RVPDFI-KAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSL---------------SAIECVLD 186 (281)
Q Consensus 127 p~~----~i~~~~-~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~i---------------e~~~~~l~ 186 (281)
... |.+.++ +.|+|.+|+|.-.. .+.++.+++ ..|..+.+....+.+- +.+..+..
T Consensus 88 I~nTv~~~a~~~~~~lg~d~vTvh~~~G-~~~l~~~~~---~~~~gv~vL~~tS~~~~~~~q~~~~~~~~~~~~V~~~a~ 163 (255)
T 3qw3_A 88 IADTADAYATSAFKHLNAHAITASPYMG-SDSLQPFMR---YPDKAVFVLCKTSNKGSNDLQCLRVGDRYLYEAVAERAE 163 (255)
T ss_dssp CHHHHHHHHHHHHTTSCCSEEEECCTTC-HHHHHHHHT---CTTSEEEEEEECCSGGGGTTTTSEETTEEHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcCCCEEEEcccCC-HHHHHHHHH---hhCCceEEEEeCCCccHHHHHhcccCCCCHHHHHHHHHH
Confidence 875 455555 58999999998753 333444333 2344444443333221 11111111
Q ss_pred c-CCEEEEEeecCCCCCCccc-hh-HHHHHHHHHHHhhhcCCCCeEEEecCCChh--cHHHHHHcCCc------EEEEcc
Q 023494 187 V-VDLVLIMSVNPGFGGQSFI-ES-QVKKISDLRRMCLEKGVNPWIEVDGGVGPK--NAYKVIEAGAN------ALVAGS 255 (281)
Q Consensus 187 ~-vD~IlvmsV~pG~~GQ~f~-~~-~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e--~i~~~~~aGAD------~~VvGS 255 (281)
. . -..|..| +. .. ..+.++.+|+..++ . .+ +-.||+++ +..+++++|+| ++|+||
T Consensus 164 ~~~-------~~~g~~G--vV~~at~~~e~~~ir~~~~~---~-~~-l~PGIg~qg~tp~~a~~~G~d~~~~~~livvGR 229 (255)
T 3qw3_A 164 GPW-------NVNGNVG--LVVGATDPVALARVRARAPT---L-WF-LVPGIGAQGGSLKASLDAGLRADGSGMLINVSR 229 (255)
T ss_dssp TGG-------GGGSCEE--EEECSSCHHHHHHHHHHCSS---C-CE-EECCC-----CHHHHHHHHCCTTSCCEEEEESH
T ss_pred HHh-------hhhCCeE--EEECCCCHHHHHHHHHHCCC---C-eE-EECCcCCCCCCHHHHHHcCCCcccCeeEEEeCh
Confidence 1 0 0112211 11 00 12345566666543 2 34 56888866 89999999999 499999
Q ss_pred cccCCCCHHHHHHHHHHhcC
Q 023494 256 AVFGAKDYAEAIKGIKTSKR 275 (281)
Q Consensus 256 aIf~a~dp~~~~~~l~~~~~ 275 (281)
.|+.++||.++++++++.+.
T Consensus 230 ~I~~A~dp~~aa~~i~~~i~ 249 (255)
T 3qw3_A 230 GLARAADPRAAAKELCEEIN 249 (255)
T ss_dssp HHHTSSCHHHHHHHHHHHHH
T ss_pred hhcCCCCHHHHHHHHHHHHH
Confidence 99999999999999988764
No 91
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, struc genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A*
Probab=98.64 E-value=2.3e-07 Score=87.13 Aligned_cols=165 Identities=16% Similarity=0.169 Sum_probs=100.0
Q ss_pred ccc-cCCHHH-------HHHcCcCCCCCeeEEEEecChhhHHHHH----H-HcCCCEEEEcccccccccHHHHHHHHHHc
Q 023494 98 PNI-TIGPLV-------VDALRPVTDLPLDVHLMIVEPEQRVPDF----I-KAGADIVSVHCEQSSTIHLHRTLNQIKDL 164 (281)
Q Consensus 98 pn~-~~G~~~-------I~~ir~~t~~~idaHLmv~dp~~~i~~~----~-~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~ 164 (281)
+.+ .+|++. ++.+|+. ++++.+|+|..|....+..+ + +.|+|++|+|+-.. .+.++.+++..+
T Consensus 137 ~lfea~G~~gi~~L~~~v~~lr~~-g~~VflDlK~~DIgnTva~ya~a~~~~lgaD~vTVhp~~G-~dsl~~a~~~~~-- 212 (353)
T 2ffc_A 137 AFYLPYGSLGVDVLKNVFDYLHHL-NVPTILDIKMNDIGNTVKHYRKFIFDYLRSDSCTANIYMG-TQMLRDICLDEE-- 212 (353)
T ss_dssp GGGSTTTHHHHHHHHHHHHHHHHH-TCCEEEEEEECCCHHHHHHHHHHHHTTSCCSEEEECCTTC-STTHHHHHBCTT--
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHc-CCcEEEEEecCchHHHHHHHHHHHHHHcCCCEEEEeCCCC-HHHHHHHHHHhc--
Confidence 444 889988 7777775 78999999999997655443 3 68999999998763 556666663322
Q ss_pred CC---cEEE--EEC-CCC------------CH-HHHHHhhcc--CCEEEEEee-cCCCCCCccch-hHHHHHHHHHHHhh
Q 023494 165 GA---KAGV--VLN-PAT------------SL-SAIECVLDV--VDLVLIMSV-NPGFGGQSFIE-SQVKKISDLRRMCL 221 (281)
Q Consensus 165 G~---k~Gl--ai~-p~t------------~i-e~~~~~l~~--vD~IlvmsV-~pG~~GQ~f~~-~~l~kI~~lr~l~~ 221 (281)
|. .+.+ .++ |+. ++ +.+..+... .+++ .. ..|.-|.- .+ ...+.++.+|+..+
T Consensus 213 ~k~~~gV~VL~lTSN~~~~dlq~~~~~~g~~v~e~V~~~A~~~g~~~~---~~~~~G~~g~V-VGats~~el~~IR~~~~ 288 (353)
T 2ffc_A 213 CKRYYSTFVLVKTTNADSHIFQNRLSLDGKEAYVVIAEEVQKMAKQLH---LEENGEFVGFV-VGANCYDEIKKIRELFP 288 (353)
T ss_dssp SCCBCEEEEEEECSSTTTHHHHTTCEETTEEHHHHHHHHHHHHHHHTT---TGGGTCCEEEE-ECTTCHHHHHHHHHHCT
T ss_pred CCCcceEEEehhcCCCCHHHHHHhhccCCCCHHHHHHHHHHHhCcccc---ccCCCCCCCEE-EeCCCHHHHHHHHHhCC
Confidence 22 2333 222 321 11 111111110 0100 00 01110100 00 11234455565543
Q ss_pred hcCCCCeEEEecCCCh--hcHHHHHHcCCc------EEEEcccccCCCCHHHHHHHHHHhcC
Q 023494 222 EKGVNPWIEVDGGVGP--KNAYKVIEAGAN------ALVAGSAVFGAKDYAEAIKGIKTSKR 275 (281)
Q Consensus 222 ~~~~~~~I~VDGGI~~--e~i~~~~~aGAD------~~VvGSaIf~a~dp~~~~~~l~~~~~ 275 (281)
++.+ +..||.+ .+..+++++|+| ++|+||+|+.++||+++++++++.+.
T Consensus 289 ----~~~i-LtPGIgaqGGD~~~a~~~Gad~~~~~~iIvVGR~I~~A~dp~~AA~~i~~ei~ 345 (353)
T 2ffc_A 289 ----DCYI-LAPGVGAQKGDLRKMLCNGYSKNYEKVLINVGRAITKSGSPQQAAREYHQQIK 345 (353)
T ss_dssp ----TCCE-EECCBSTTCBCHHHHHHHHCCSSGGGEEEEECHHHHTSSCHHHHHHHHHHHHH
T ss_pred ----CCeE-EeCcccCCCCCHHHHHHcCCCcccCcEEEEECHHHcCCCCHHHHHHHHHHHHH
Confidence 2444 6888885 378899999998 99999999999999999999998764
No 92
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=98.59 E-value=1.4e-06 Score=78.19 Aligned_cols=187 Identities=16% Similarity=0.143 Sum_probs=126.6
Q ss_pred EeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCC
Q 023494 60 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGA 139 (281)
Q Consensus 60 i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGA 139 (281)
=|||=...++ +..+ +....++|+.-|-| .-|..| |.=..+.++.+|+.++.|+..-=.+-||.+ +..+..+||
T Consensus 55 aSPSkg~i~~-dp~~-iA~~~~~GA~aiSV-LTd~~~---F~Gs~~~L~~vr~~v~lPvLrKDFiid~yQ-I~eAr~~GA 127 (258)
T 4a29_A 55 KSPSGLDVER-DPIE-YAKFMERYAVGLSI-TTEEKY---FNGSYETLRKIASSVSIPILMSDFIVKESQ-IDDAYNLGA 127 (258)
T ss_dssp BCTTSCBCCC-CHHH-HHHHHTTTCSEEEE-ECCSTT---TCCCHHHHHHHHTTCSSCEEEESCCCSHHH-HHHHHHHTC
T ss_pred CCCCCCCccC-CHHH-HHHHHhCCCeEEEE-eCCCCC---CCCCHHHHHHHHHhcCCCEeeccccccHHH-HHHHHHcCC
Confidence 3566322232 2333 33344679998765 445432 344678889999888899876545567653 455777899
Q ss_pred CEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCCCCccchhHHHHHHHHHH
Q 023494 140 DIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRR 218 (281)
Q Consensus 140 d~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~ 218 (281)
|.|.+-....+..++.++++.+++.|+.+-+-++. .++++..+. .+++|.+=..+. ..|. -.++.-.++..
T Consensus 128 DaILLI~a~L~~~~l~~l~~~A~~lGl~~LvEVh~---~~El~rAl~~~a~iIGINNRnL----~tf~-vdl~~t~~L~~ 199 (258)
T 4a29_A 128 DTVLLIVKILTERELESLLEYARSYGMEPLILIND---ENDLDIALRIGARFIGIMSRDF----ETGE-INKENQRKLIS 199 (258)
T ss_dssp SEEEEEGGGSCHHHHHHHHHHHHHTTCCCEEEESS---HHHHHHHHHTTCSEEEECSBCT----TTCC-BCHHHHHHHHT
T ss_pred CeeehHHhhcCHHHHHHHHHHHHHHhHHHHHhcch---HHHHHHHhcCCCcEEEEeCCCc----cccc-cCHHHHHHHHh
Confidence 99999887765567899999999999999998864 333443333 577774422221 1122 12444555666
Q ss_pred HhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCCCCHH
Q 023494 219 MCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGAKDYA 264 (281)
Q Consensus 219 l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a~dp~ 264 (281)
.+++ +..+..-+||+ ++++..+.++|+|.|.+|+++.+++||.
T Consensus 200 ~ip~---~~~~VsESGI~t~~dv~~l~~~G~~a~LVGealmr~~d~~ 243 (258)
T 4a29_A 200 MIPS---NVVKVAKLGISERNEIEELRKLGVNAFLISSSLMRNPEKI 243 (258)
T ss_dssp TSCT---TSEEEEEESSCCHHHHHHHHHTTCCEEEECHHHHHCTTHH
T ss_pred hCCC---CCEEEEcCCCCCHHHHHHHHHCCCCEEEECHHHhCCCcHH
Confidence 6553 45566789997 8999999999999999999999988874
No 93
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=98.57 E-value=5.2e-07 Score=87.43 Aligned_cols=197 Identities=14% Similarity=0.082 Sum_probs=118.0
Q ss_pred eEEEeccCccC------HHHHHHHHHHcC--CCeEEEEeeeCcccccc-cCCHHHHHHcCcC-----CCCCeeEEEEecC
Q 023494 61 SPSILSANFAK------LGEQVKAVELAG--CDWIHVDVMDGRFVPNI-TIGPLVVDALRPV-----TDLPLDVHLMIVE 126 (281)
Q Consensus 61 ~pSila~D~~~------l~~~l~~l~~~G--~d~iHiDImDG~fvpn~-~~G~~~I~~ir~~-----t~~~idaHLmv~d 126 (281)
+|-+.++|+.. .+..++.+++.+ +.++-+ | .+.+ .+|++.++.|++. .++++.+|+|..|
T Consensus 15 ~~l~vaLD~~~~~~~~~~~~a~~~v~~~~~~v~~~Kv----g--~~lf~~~G~~~v~~L~~~~~~~~~g~~VflDlK~~D 88 (453)
T 3qw4_B 15 SLLCVGLDPRAKTAAAAVEECKRLIEQTHEYAAAYKP----N--AAFFEFFGAEGWAALSEVIRAVPAGIPVVLDAKRGD 88 (453)
T ss_dssp CCEEEEECCCCSSHHHHHHHHHHHHHHHGGGCSEEEE----B--HHHHHTTHHHHHHHHHHHHHTSCTTSCBEEEEEECC
T ss_pred CCEEEEeCCCcccccHHHHHHHHHHHHhCCcCcEEEE----c--HHHHHhcCHHHHHHHHHHHHhhcCCCeEEEEeecCC
Confidence 35577889877 554444444431 444444 3 2333 7899999988773 5789999999999
Q ss_pred hhh----HHHHHHH-cCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCH-HHH-----------HHhhccCC
Q 023494 127 PEQ----RVPDFIK-AGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSL-SAI-----------ECVLDVVD 189 (281)
Q Consensus 127 p~~----~i~~~~~-aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~i-e~~-----------~~~l~~vD 189 (281)
... |.+.+++ .|+|.+|+|.-.. .+.+..+++. .|..+.+....+.+- ..+ +.++..+.
T Consensus 89 IpnT~~~~a~~~~~~lg~d~vTvh~~~G-~~~l~~~~~~---~~~~v~vL~~tS~~~~~~lq~~~~~~~~~~~~V~~~a~ 164 (453)
T 3qw4_B 89 IADTADAYATSAFKHLNAHAITASPYMG-SDSLQPFMRY---PDKAVFVLCKTSNKGSNDLQCLRVGDRYLYEAVAERAE 164 (453)
T ss_dssp CHHHHHHHHHHHHTTSCCSEEEECSTTC-HHHHHHHHTC---TTSEEEEEEECSSGGGGGTTTSEETTEEHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHcCCCEEEEcccCC-HHHHHHHHHh---hCCcEEEEEeCCCcchHHHHhcccCCCCHHHHHHHHHH
Confidence 875 4445554 8999999998753 3334444332 344454444333321 011 11111111
Q ss_pred EEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChh--cHHHHHHcCCcE------EEEcccccCCC
Q 023494 190 LVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPK--NAYKVIEAGANA------LVAGSAVFGAK 261 (281)
Q Consensus 190 ~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e--~i~~~~~aGAD~------~VvGSaIf~a~ 261 (281)
...-..|..|----....+.++.+|+.+++ . .+ +-.||.++ +..+++++|+|. +|+|+.|+.++
T Consensus 165 ---~~~~~~g~~GvV~gat~~~e~~~ir~~~~~---~-~~-l~PGig~qg~tp~~a~~~g~d~~~~~~livvgR~I~~A~ 236 (453)
T 3qw4_B 165 ---GPWNVNGNVGLVVGATDPVALARVRARAPT---L-WF-LVPGIGAQGGSLKASLDAGLRADGSGMLINVSRGLARAA 236 (453)
T ss_dssp ---TTTCTTSCEEEEECTTCHHHHHHHHHHCSS---C-CE-EECCSSTTCCCHHHHHHHHCCTTSCCEEEEESHHHHSCS
T ss_pred ---HHHhhcCCeEEEECCCCHHHHHHHHHhCCC---C-eE-EECCcCCCCCCHHHHHHhcCCcccCCceEecChhhccCC
Confidence 000012222200000113345666666543 2 35 45888865 899999999998 99999999999
Q ss_pred CHHHHHHHHHHhcC
Q 023494 262 DYAEAIKGIKTSKR 275 (281)
Q Consensus 262 dp~~~~~~l~~~~~ 275 (281)
||.++++++++.++
T Consensus 237 dp~~aa~~i~~~i~ 250 (453)
T 3qw4_B 237 DPRAAAKELCEEIN 250 (453)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 99999999887653
No 94
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=98.51 E-value=7.9e-07 Score=79.91 Aligned_cols=191 Identities=18% Similarity=0.181 Sum_probs=115.3
Q ss_pred CccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChh--------hHHHHHHH-c-
Q 023494 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPE--------QRVPDFIK-A- 137 (281)
Q Consensus 68 D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~--------~~i~~~~~-a- 137 (281)
-+.+.+..-+.++..|++.+-+=+---.... -.-...+.+.|++ ..++++-|..+ +..++..+ +
T Consensus 28 ky~~~~~~~~a~~asg~e~vtva~rR~~~~~-~~~~~~~~~~i~~-----~~~~~lpNTag~~ta~eAv~~a~lare~~~ 101 (265)
T 1wv2_A 28 KYKDLDETRRAIEASGAEIVTVAVRRTNIGQ-NPDEPNLLDVIPP-----DRYTILPNTAGCYDAVEAVRTCRLARELLD 101 (265)
T ss_dssp CSSSHHHHHHHHHHSCCSEEEEEGGGCCC--------------CT-----TTSEEEEECTTCCSHHHHHHHHHHHHTTTT
T ss_pred CCCCHHHHHHHHHHhCCCeEEEEEEeecccc-CCCcchHHhhhhh-----cCCEECCcCCCCCCHHHHHHHHHHHHHHcC
Confidence 4446666666777889988766432111000 0112344444432 24566665553 12333445 3
Q ss_pred CCCEEEEccccc---ccccHHHHHHHHHHc---CCcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCCCCccchhHH
Q 023494 138 GADIVSVHCEQS---STIHLHRTLNQIKDL---GAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQV 210 (281)
Q Consensus 138 GAd~Itvh~Ea~---~~~~i~~~l~~ik~~---G~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f~~~~l 210 (281)
|.+||-+-.-.. ...++.++++++++. |+++-..+.++ +...+.+.+ .++.|+-++...|. |+... ..
T Consensus 102 ~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd--~~~akrl~~~G~~aVmPlg~pIGs-G~Gi~--~~ 176 (265)
T 1wv2_A 102 GHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDD--PIIARQLAEIGCIAVMPLAGLIGS-GLGIC--NP 176 (265)
T ss_dssp SCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECSC--HHHHHHHHHSCCSEEEECSSSTTC-CCCCS--CH
T ss_pred CCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCCC--HHHHHHHHHhCCCEEEeCCccCCC-CCCcC--CH
Confidence 678887664421 135688888888877 99888666543 433444433 47877433333343 44331 13
Q ss_pred HHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhc
Q 023494 211 KKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSK 274 (281)
Q Consensus 211 ~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~ 274 (281)
+.|+++++. .++++.+||||+ ++.+..+.+.|||.+++||+|++++||...++.|++.+
T Consensus 177 ~lI~~I~e~-----~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgSAI~~a~dP~~ma~af~~Av 236 (265)
T 1wv2_A 177 YNLRIILEE-----AKVPVLVDAGVGTASDAAIAMELGCEAVLMNTAIAHAKDPVMMAEAMKHAI 236 (265)
T ss_dssp HHHHHHHHH-----CSSCBEEESCCCSHHHHHHHHHHTCSEEEESHHHHTSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhc-----CCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHH
Confidence 445555553 247888999999 89999999999999999999999999999998888744
No 95
>2fds_A Orotidine-monophosphate-decarboxylase; TIM barrel, structural genomics, structural genomics consortium, SGC, unknown function; 1.72A {Plasmodium berghei} SCOP: c.1.2.3 PDB: 2aqw_A
Probab=98.48 E-value=5.8e-08 Score=91.16 Aligned_cols=172 Identities=13% Similarity=0.117 Sum_probs=95.1
Q ss_pred ccc-cCCHHHH-------HHcCcCCCCCeeEEEEecChhhHHHHH----HH-cCCCEEEEcccccccccHHHHHH-HHHH
Q 023494 98 PNI-TIGPLVV-------DALRPVTDLPLDVHLMIVEPEQRVPDF----IK-AGADIVSVHCEQSSTIHLHRTLN-QIKD 163 (281)
Q Consensus 98 pn~-~~G~~~I-------~~ir~~t~~~idaHLmv~dp~~~i~~~----~~-aGAd~Itvh~Ea~~~~~i~~~l~-~ik~ 163 (281)
+.+ .+|++.+ +.+|+. ++++.+|+|..|.+..++.+ ++ .|+|++|+|.-.. .+.++.+++ ..++
T Consensus 127 ~lf~~~G~~gv~~L~~~i~~lk~~-g~~VflDlK~~DIgnTv~~ya~a~~~~lgaD~vTVh~~~G-~~sl~~a~~~~a~~ 204 (352)
T 2fds_A 127 AFYIPYGSVGINALKNVFDYLNSM-NIPTMLDMKINDIGNTVKNYRKFIFEYLKSDSCTINVYMG-TSMLKDICFDYEKN 204 (352)
T ss_dssp GGTGGGTHHHHHHHHHHHHHHHHT-TCCEEEEEEECCCHHHHHHHHHHHHTTSCCSEEEECCTTC-STTHHHHSEETTTT
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHC-CCeEEEEeecCchHHHHHHHHHHHHhhcCCCEEEEeCCCC-HHHHHHHHHHHhhc
Confidence 444 8899888 566654 79999999999997655443 45 6999999998763 455666654 3334
Q ss_pred cCCcEEEEECCCCCH-HHHHHhh--c-------cCCEEEEEeecCCCC---CC-cc-chh-HHHHHHHHHHHhhhcCCCC
Q 023494 164 LGAKAGVVLNPATSL-SAIECVL--D-------VVDLVLIMSVNPGFG---GQ-SF-IES-QVKKISDLRRMCLEKGVNP 227 (281)
Q Consensus 164 ~G~k~Glai~p~t~i-e~~~~~l--~-------~vD~IlvmsV~pG~~---GQ-~f-~~~-~l~kI~~lr~l~~~~~~~~ 227 (281)
+|..+-+.--.+.+- ..+++.. + .+|++.-+..+-|.+ ++ -+ .+. ..+.++.+|+..+ ++
T Consensus 205 ~gkgv~lLa~TSn~~~~dlq~~~~~~g~~l~~~v~~~v~~la~~~G~d~~~~~~GvVvGaTs~~e~~~iR~~~~----~~ 280 (352)
T 2fds_A 205 KYYSAYVLIKTTNKDSFIFQNELSINDKQAYIVMAEETQKMATDLKIDQNNEFIGFVVGSNAFEEMKIIRNKFP----DS 280 (352)
T ss_dssp EECEEEEEEECSSGGGHHHHTTCEETTEEHHHHHHHHHHHHHHHHTTGGGTCCEEEEECTTCHHHHHHHHHHST----TC
T ss_pred cCCceEEEEEeCCcCHHHHHHhhccCCCcHHHHHHHHHHHHHHHhCCCccCCcceEEEcCCCHHHHHHHHHhCC----CC
Confidence 444443322112121 2233210 0 012221111111111 00 00 001 1234455555543 34
Q ss_pred eE-----EEecCCChhcHHHH--HHcCCcEEEEcccccCCCCHHHHHHHHHHhcC
Q 023494 228 WI-----EVDGGVGPKNAYKV--IEAGANALVAGSAVFGAKDYAEAIKGIKTSKR 275 (281)
Q Consensus 228 ~I-----~VDGGI~~e~i~~~--~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~~ 275 (281)
.+ ...||...+.+... .+.|+|++|+||+|++++||.++++++++.+.
T Consensus 281 ~iLtPGIGaqgGdq~rv~tp~~a~~~gadiIvVGR~I~~A~dp~~Aa~~i~~ei~ 335 (352)
T 2fds_A 281 YILSPGIGAQNGDLYKTLKNGYNKDYEKLLINVGRAITKSPNPKKSSESYYNQII 335 (352)
T ss_dssp CEEECCC-----CHHHHHHHHCCSSGGGEEEEECHHHHTSSCHHHHHHHHHHHHH
T ss_pred EEEcCccccccCcHHHhhCHHhHhhcCceEEEECHHHccCCCHHHHHHHHHHHHH
Confidence 44 45566554434333 57799999999999999999999999988653
No 96
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=98.47 E-value=3.2e-06 Score=76.11 Aligned_cols=182 Identities=16% Similarity=0.082 Sum_probs=116.7
Q ss_pred HHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEccccccc
Q 023494 72 LGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSST 151 (281)
Q Consensus 72 l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~~~ 151 (281)
-.+..+.+.+.|++++|+=-.|+ -..+.++++.+..+.|+.+.==+.+ . -++.++ +||+.|.+...+ .
T Consensus 40 p~~~A~~~~~~Ga~~l~vvDL~~-------~n~~~i~~i~~~~~~pv~vgGGir~-~-~~~~~l-~Ga~~Viigs~a--~ 107 (260)
T 2agk_A 40 SSYYAKLYKDRDVQGCHVIKLGP-------NNDDAAREALQESPQFLQVGGGIND-T-NCLEWL-KWASKVIVTSWL--F 107 (260)
T ss_dssp HHHHHHHHHHTTCTTCEEEEESS-------SCHHHHHHHHHHSTTTSEEESSCCT-T-THHHHT-TTCSCEEECGGG--B
T ss_pred HHHHHHHHHHcCCCEEEEEeCCC-------CCHHHHHHHHhcCCceEEEeCCCCH-H-HHHHHh-cCCCEEEECcHH--H
Confidence 34445677788999999844555 2467788887766677665433332 2 566677 999999998875 3
Q ss_pred cc-----HHHHHHHHHHcC-CcE--EEEEC---C-C--------------CCH-HHHHHhhccCCEEEEEeecC-CC-CC
Q 023494 152 IH-----LHRTLNQIKDLG-AKA--GVVLN---P-A--------------TSL-SAIECVLDVVDLVLIMSVNP-GF-GG 202 (281)
Q Consensus 152 ~~-----i~~~l~~ik~~G-~k~--Glai~---p-~--------------t~i-e~~~~~l~~vD~IlvmsV~p-G~-~G 202 (281)
.+ ++.+-+.+++.| -++ ++... . . +++ +.++.+.+.++.|+++.+.. |. .|
T Consensus 108 ~~~g~~~p~~~~~~~~~~g~~~ivv~iD~k~~~~~g~~V~~~gw~~~t~~~~~~e~a~~~~~~a~~il~t~i~~dG~~~G 187 (260)
T 2agk_A 108 TKEGHFQLKRLERLTELCGKDRIVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADTFRELRKYTNEFLIHAADVEGLCGG 187 (260)
T ss_dssp CTTCCBCHHHHHHHHHHHCGGGEEEEEEEEEEETTEEEEEETTTTEEEEEEESHHHHHHHTTTCSEEEEEC-------CC
T ss_pred hhcCCCCHHHHHHHHHHhCcCcEEEEEEeeecCCCceEEEEcCCccccCccHHHHHHHHHHHhcCEEEEEeeccccCcCC
Confidence 45 655555566666 333 33332 1 0 234 66666666689999987754 33 23
Q ss_pred CccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHc--CCcEEEEcccc--cCC--CCHHHHHHHHH
Q 023494 203 QSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEA--GANALVAGSAV--FGA--KDYAEAIKGIK 271 (281)
Q Consensus 203 Q~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~a--GAD~~VvGSaI--f~a--~dp~~~~~~l~ 271 (281)
+ .++.++++++..+. ..++++.+-|||+ ++.+.++.+. |+|.+++||++ +.. -++.+..+.++
T Consensus 188 --~---d~eli~~l~~~~~~-~~~iPVIasGGi~s~ed~~~l~~~~~G~~gvivg~al~l~~g~~~~~~~~~~~~~ 257 (260)
T 2agk_A 188 --I---DELLVSKLFEWTKD-YDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSSLDIFGGNLVKFEDCCRWNE 257 (260)
T ss_dssp --C---CHHHHHHHHHHHTT-CSSCEEEEESCCCCTHHHHHHHHHHTTCEEEECCTTBGGGTCSSBCHHHHHHHHH
T ss_pred --C---CHHHHHHHHHhhcc-cCCceEEEeCCCCCHHHHHHHHHhcCCCCEEEeeCCHHHcCCCCCCHHHHHHHHH
Confidence 2 35556666665410 0036898999998 8999999988 99999999996 643 35666665554
No 97
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=98.45 E-value=2.3e-06 Score=78.35 Aligned_cols=146 Identities=18% Similarity=0.319 Sum_probs=102.4
Q ss_pred CCCCeeEEEEecChhhHHH---HHHHcCCC---EEEEccccc----------ccccHHHHHHHHHHc-CCcEEEEECCCC
Q 023494 114 TDLPLDVHLMIVEPEQRVP---DFIKAGAD---IVSVHCEQS----------STIHLHRTLNQIKDL-GAKAGVVLNPAT 176 (281)
Q Consensus 114 t~~~idaHLmv~dp~~~i~---~~~~aGAd---~Itvh~Ea~----------~~~~i~~~l~~ik~~-G~k~Glai~p~t 176 (281)
++.|+.+-+.-.+++.|.+ .+.++|+| .|.+|.-+. +.+.+.++++++|+. ++.+.+=+.|+.
T Consensus 92 ~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~~~~~ 171 (314)
T 2e6f_A 92 SKKPLFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKMPPYF 171 (314)
T ss_dssp TTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEECCCC
T ss_pred CCCcEEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCCCEEEEECCCC
Confidence 5789999988888887654 45678999 999986421 112356788888876 778888888876
Q ss_pred CHHHHHHhh----c-c-CCEEEEEe-------ecC--------------CCCCCccchhHHHHHHHHHHHhhhcCCCCeE
Q 023494 177 SLSAIECVL----D-V-VDLVLIMS-------VNP--------------GFGGQSFIESQVKKISDLRRMCLEKGVNPWI 229 (281)
Q Consensus 177 ~ie~~~~~l----~-~-vD~Ilvms-------V~p--------------G~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I 229 (281)
..+.+.++. + . +|+|.+.. +++ |..|....|..++.++++++..+ +++|
T Consensus 172 ~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~----~ipv 247 (314)
T 2e6f_A 172 DIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCP----DKLV 247 (314)
T ss_dssp CHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCT----TSEE
T ss_pred CHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcC----CCCE
Confidence 655543332 2 3 78776532 110 22333334666777888877651 4899
Q ss_pred EEecCCC-hhcHHHHHHcCCcEEEEcccccC-CCCH
Q 023494 230 EVDGGVG-PKNAYKVIEAGANALVAGSAVFG-AKDY 263 (281)
Q Consensus 230 ~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~-a~dp 263 (281)
...|||+ .+++.+++++|||.+.+||+++. .++.
T Consensus 248 i~~GGI~~~~da~~~l~~GAd~V~ig~~~l~~~p~~ 283 (314)
T 2e6f_A 248 FGCGGVYSGEDAFLHILAGASMVQVGTALQEEGPGI 283 (314)
T ss_dssp EEESSCCSHHHHHHHHHHTCSSEEECHHHHHHCTTH
T ss_pred EEECCCCCHHHHHHHHHcCCCEEEEchhhHhcCcHH
Confidence 9999997 89999999999999999999884 5543
No 98
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=98.43 E-value=3.2e-06 Score=76.12 Aligned_cols=188 Identities=18% Similarity=0.187 Sum_probs=114.0
Q ss_pred CccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChh-----h---HHHHHHH-cC
Q 023494 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPE-----Q---RVPDFIK-AG 138 (281)
Q Consensus 68 D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~-----~---~i~~~~~-aG 138 (281)
-+.+.+...+.+...|++.+-+++.--. +.-.-+..+...|+ .++++-++.+ + ..+...+ .|
T Consensus 21 ky~~~~~~~~ai~asg~eivtva~rR~~--~~~~~~~~~~~~i~-------~~~~lpntaG~~taeeAv~~a~lare~~g 91 (268)
T 2htm_A 21 KYEDFGVMREAIAAAKAEVVTVSVRRVE--LKAPGHVGLLEALE-------GVRLLPNTAGARTAEEAVRLARLGRLLTG 91 (268)
T ss_dssp SCSCHHHHHHHHHHTTCSEEEEEEEECC---------CHHHHTT-------TSEEEEBCTTCCSHHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHhCCCEEEEEccccC--CCCCCcccHHHHHh-------hhhccCcccCCCCHHHHHHHHHhhhHhcC
Confidence 4456666667778899999999854321 10122345566665 3444544443 2 2222333 36
Q ss_pred CCEEEE--ccccc-ccccHHHHHHHHHHc---CCcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCCCCcc-chhHH
Q 023494 139 ADIVSV--HCEQS-STIHLHRTLNQIKDL---GAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSF-IESQV 210 (281)
Q Consensus 139 Ad~Itv--h~Ea~-~~~~i~~~l~~ik~~---G~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f-~~~~l 210 (281)
-++|-+ +.|.. -..++.+++++++.. |.++--..++ +++..+.+.+ .++.|+-++...|. |+.. .++.
T Consensus 92 t~~iKlEvi~d~~~l~pD~~~tv~aa~~L~k~Gf~Vlpy~~~--D~~~ak~l~~~G~~aVmPlg~pIGs-G~Gi~~~~~- 167 (268)
T 2htm_A 92 ERWVKLEVIPDPTYLLPDPLETLKAAERLIEEDFLVLPYMGP--DLVLAKRLAALGTATVMPLAAPIGS-GWGVRTRAL- 167 (268)
T ss_dssp CSEEBCCCCSCTTTTCCCHHHHHHHHHHHHHTTCEECCEECS--CHHHHHHHHHHTCSCBEEBSSSTTT-CCCSTTHHH-
T ss_pred cceeeeeeccCccccCcCHHHHHHHHHHHHHCCCEEeeccCC--CHHHHHHHHhcCCCEEEecCccCcC-CcccCCHHH-
Confidence 788653 33321 134678888888877 8776533332 3344444433 46777333333354 4433 2433
Q ss_pred HHHHHHHHHhhhcCCC-CeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhc
Q 023494 211 KKISDLRRMCLEKGVN-PWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSK 274 (281)
Q Consensus 211 ~kI~~lr~l~~~~~~~-~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~ 274 (281)
|+++++. ..+ +++.+||||. ++.+..+.+.|||.+++||+|++++||...++.|++.+
T Consensus 168 --L~~i~~~----~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVgSAI~~a~dP~~ma~af~~Av 227 (268)
T 2htm_A 168 --LELFARE----KASLPPVVVDAGLGLPSHAAEVMELGLDAVLVNTAIAEAQDPPAMAEAFRLAV 227 (268)
T ss_dssp --HHHHHHT----TTTSSCBEEESCCCSHHHHHHHHHTTCCEEEESHHHHTSSSHHHHHHHHHHHH
T ss_pred --HHHHHHh----cCCCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHH
Confidence 4444431 124 6788999999 79999999999999999999999999999998888743
No 99
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=98.40 E-value=4.6e-06 Score=78.71 Aligned_cols=176 Identities=19% Similarity=0.260 Sum_probs=106.7
Q ss_pred CHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEe-cCh--hhHHHHHHHcCCCEEEEccc
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMI-VEP--EQRVPDFIKAGADIVSVHCE 147 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv-~dp--~~~i~~~~~aGAd~Itvh~E 147 (281)
+-+=++......|+..+| +++.| ..-.+.++.+|+... +.+-+.+ .++ .+.++.+.++|+|.|.++..
T Consensus 59 ~~~lA~avA~aGGlg~i~-----~~~s~--e~~~~~i~~vk~~~~--l~vga~vg~~~~~~~~~~~lieaGvd~I~idta 129 (366)
T 4fo4_A 59 EARLAIALAQEGGIGFIH-----KNMSI--EQQAAQVHQVKISGG--LRVGAAVGAAPGNEERVKALVEAGVDVLLIDSS 129 (366)
T ss_dssp SHHHHHHHHHTTCEEEEC-----SSSCH--HHHHHHHHHHHTTTS--CCCEEECCSCTTCHHHHHHHHHTTCSEEEEECS
T ss_pred hHHHHHHHHHcCCceEee-----cCCCH--HHHHHHHHHHHhcCc--eeEEEEeccChhHHHHHHHHHhCCCCEEEEeCC
Confidence 433334455567766665 33222 111234555555422 3333444 233 45788899999999998543
Q ss_pred ccccccHHHHHHHHHHc--CCcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCC-CCc----cchhHHHHHHHHHHH
Q 023494 148 QSSTIHLHRTLNQIKDL--GAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFG-GQS----FIESQVKKISDLRRM 219 (281)
Q Consensus 148 a~~~~~i~~~l~~ik~~--G~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~-GQ~----f~~~~l~kI~~lr~l 219 (281)
....+...+.++++|+. ++.+..- + -+..+..+.+.+ .+|+|.+ +..||.- +.. +-...+.-|.++++.
T Consensus 130 ~G~~~~~~~~I~~ik~~~p~v~Vi~G-~-v~t~e~A~~a~~aGAD~I~v-G~gpGs~~~tr~~~g~g~p~~~~l~~v~~~ 206 (366)
T 4fo4_A 130 HGHSEGVLQRIRETRAAYPHLEIIGG-N-VATAEGARALIEAGVSAVKV-GIGPGSICTTRIVTGVGVPQITAIADAAGV 206 (366)
T ss_dssp CTTSHHHHHHHHHHHHHCTTCEEEEE-E-ECSHHHHHHHHHHTCSEEEE-CSSCSTTBCHHHHHCCCCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCceEee-e-eCCHHHHHHHHHcCCCEEEE-ecCCCCCCCcccccCcccchHHHHHHHHHH
Confidence 21123455678888876 5555432 1 134555666555 4999987 6667642 110 111234455666554
Q ss_pred hhhcCCCCeEEEecCC-ChhcHHHHHHcCCcEEEEcccccCC
Q 023494 220 CLEKGVNPWIEVDGGV-GPKNAYKVIEAGANALVAGSAVFGA 260 (281)
Q Consensus 220 ~~~~~~~~~I~VDGGI-~~e~i~~~~~aGAD~~VvGSaIf~a 260 (281)
.+. .++++..|||| +.+++.+++++|||.+.+||++...
T Consensus 207 ~~~--~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~f~~t 246 (366)
T 4fo4_A 207 ANE--YGIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAGT 246 (366)
T ss_dssp HGG--GTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTB
T ss_pred Hhh--cCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHhhcC
Confidence 433 25789999999 5899999999999999999998864
No 100
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=98.38 E-value=4e-06 Score=76.57 Aligned_cols=142 Identities=16% Similarity=0.263 Sum_probs=98.2
Q ss_pred CCCeeEEEEecChhhHHH---HHHHcCCC-EEEEccccc----------ccccHHHHHHHHHHc-CCcEEEEECCCCCHH
Q 023494 115 DLPLDVHLMIVEPEQRVP---DFIKAGAD-IVSVHCEQS----------STIHLHRTLNQIKDL-GAKAGVVLNPATSLS 179 (281)
Q Consensus 115 ~~~idaHLmv~dp~~~i~---~~~~aGAd-~Itvh~Ea~----------~~~~i~~~l~~ik~~-G~k~Glai~p~t~ie 179 (281)
+.|+.+.+.-.+++.|.+ .+.++|+| +|.+|.-+. +.+.+.++++++|+. ++.+.+=+.|+...+
T Consensus 93 ~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~~~~~ 172 (311)
T 1jub_A 93 EGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPYFDLV 172 (311)
T ss_dssp SSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCCCSHH
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECCCCCHH
Confidence 688999888888887644 45788999 999986421 122346788888876 677888788876654
Q ss_pred HHHHh---hc--cCCEEEEEe-------ecC--------------CCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEec
Q 023494 180 AIECV---LD--VVDLVLIMS-------VNP--------------GFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDG 233 (281)
Q Consensus 180 ~~~~~---l~--~vD~Ilvms-------V~p--------------G~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDG 233 (281)
.+.++ +. .+|.|.+.. +++ |..|....|..++.++++++... .+++|...|
T Consensus 173 ~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~---~~ipvi~~G 249 (311)
T 1jub_A 173 HFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLK---PEIQIIGTG 249 (311)
T ss_dssp HHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSC---TTSEEEEES
T ss_pred HHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcC---CCCCEEEEC
Confidence 44332 22 278886531 110 12243334555666776665432 258999999
Q ss_pred CCC-hhcHHHHHHcCCcEEEEcccccC
Q 023494 234 GVG-PKNAYKVIEAGANALVAGSAVFG 259 (281)
Q Consensus 234 GI~-~e~i~~~~~aGAD~~VvGSaIf~ 259 (281)
||+ .+++.+++.+|||.+.+||+++.
T Consensus 250 GI~~~~da~~~l~~GAd~V~vg~~~l~ 276 (311)
T 1jub_A 250 GIETGQDAFEHLLCGATMLQIGTALHK 276 (311)
T ss_dssp SCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred CCCCHHHHHHHHHcCCCEEEEchHHHh
Confidence 995 89999999999999999999884
No 101
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=98.33 E-value=1.4e-05 Score=74.56 Aligned_cols=192 Identities=15% Similarity=0.159 Sum_probs=125.7
Q ss_pred cCHHHHHHHHHHcCCCeEEEEeeeCcc------cccccCCHHHHHHcCcC-CCCCeeEEEEecCh----hhHHHHHHHcC
Q 023494 70 AKLGEQVKAVELAGCDWIHVDVMDGRF------VPNITIGPLVVDALRPV-TDLPLDVHLMIVEP----EQRVPDFIKAG 138 (281)
Q Consensus 70 ~~l~~~l~~l~~~G~d~iHiDImDG~f------vpn~~~G~~~I~~ir~~-t~~~idaHLmv~dp----~~~i~~~~~aG 138 (281)
.+..+.++.|.++|+|+|++---||-+ .|...--.+.++.+++. ++.++.+ |+ .| .++++.+.++|
T Consensus 30 e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~~~i~~--l~-~p~~~~~~~i~~a~~aG 106 (345)
T 1nvm_A 30 DDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQIAT--LL-LPGIGSVHDLKNAYQAG 106 (345)
T ss_dssp HHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSSSEEEE--EE-CBTTBCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCCCEEEE--Ee-cCCcccHHHHHHHHhCC
Confidence 344566778888999999883222211 12222234667777664 5555554 32 23 56899999999
Q ss_pred CCEEEEcccccccccHHHHHHHHHHcCCcEEEEE--CCCCCHHHHHHhhcc-----CCEEEEEeecCCCCCCccchhHHH
Q 023494 139 ADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVL--NPATSLSAIECVLDV-----VDLVLIMSVNPGFGGQSFIESQVK 211 (281)
Q Consensus 139 Ad~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai--~p~t~ie~~~~~l~~-----vD~IlvmsV~pG~~GQ~f~~~~l~ 211 (281)
+|.+.+..-....+...+.++.+|++|+.+...+ .+.++.+.+.++.+. +|.|.+. +..|.....+..+
T Consensus 107 vd~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~----DT~G~~~P~~v~~ 182 (345)
T 1nvm_A 107 ARVVRVATHCTEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYMA----DSGGAMSMNDIRD 182 (345)
T ss_dssp CCEEEEEEETTCGGGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEEEE----CTTCCCCHHHHHH
T ss_pred cCEEEEEEeccHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEEEC----CCcCccCHHHHHH
Confidence 9998887432123567889999999999998877 777888877777653 7877663 4455444445566
Q ss_pred HHHHHHHHhhhcCCCCeEEE----ecCCChhcHHHHHHcCCcEEEE---c-ccccCCCCHHHHHHHHH
Q 023494 212 KISDLRRMCLEKGVNPWIEV----DGGVGPKNAYKVIEAGANALVA---G-SAVFGAKDYAEAIKGIK 271 (281)
Q Consensus 212 kI~~lr~l~~~~~~~~~I~V----DGGI~~e~i~~~~~aGAD~~Vv---G-SaIf~a~dp~~~~~~l~ 271 (281)
.++.+++..+ .+.+|.+ |-|....|.-..+++|||.+=. | +.=.++.+.++.+..|+
T Consensus 183 lv~~l~~~~~---~~~pi~~H~Hn~~G~avAn~laA~~aGa~~vd~tv~GlG~~aGN~~le~lv~~L~ 247 (345)
T 1nvm_A 183 RMRAFKAVLK---PETQVGMHAHHNLSLGVANSIVAVEEGCDRVDASLAGMGAGAGNAPLEVFIAVAE 247 (345)
T ss_dssp HHHHHHHHSC---TTSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSSTTCBCBHHHHHHHHH
T ss_pred HHHHHHHhcC---CCceEEEEECCCccHHHHHHHHHHHcCCCEEEecchhccCCccCcCHHHHHHHHH
Confidence 7777777653 1468888 7799999999999999987532 2 11123345555555544
No 102
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=98.32 E-value=1.8e-06 Score=81.35 Aligned_cols=122 Identities=22% Similarity=0.328 Sum_probs=82.6
Q ss_pred hHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHc--CCcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCCCC--
Q 023494 129 QRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL--GAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQ-- 203 (281)
Q Consensus 129 ~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~--G~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ-- 203 (281)
+.++.+.++|+|.|+++........+.+.++++|+. ++.+..- +.. ..+..+.+.+ .+|+|.+ +.+||....
T Consensus 103 e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~G-~V~-T~e~A~~a~~aGaD~I~V-g~g~G~~~~tr 179 (361)
T 3r2g_A 103 QRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAG-NVA-TYAGADYLASCGADIIKA-GIGGGSVCSTR 179 (361)
T ss_dssp HHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEEE-EEC-SHHHHHHHHHTTCSEEEE-CCSSSSCHHHH
T ss_pred HHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEEc-CcC-CHHHHHHHHHcCCCEEEE-cCCCCcCcccc
Confidence 467888999999999975432233456788999986 5555541 223 3455555555 4999987 677764210
Q ss_pred ---cc-chhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCC
Q 023494 204 ---SF-IESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGA 260 (281)
Q Consensus 204 ---~f-~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a 260 (281)
.+ .| .+..|.++++. . . +|.+||||+ .+++.+++++|||.+.+||.++..
T Consensus 180 ~~~g~g~p-~l~aI~~~~~~---~--~-PVIAdGGI~~~~di~kALa~GAd~V~iGr~f~~t 234 (361)
T 3r2g_A 180 IKTGFGVP-MLTCIQDCSRA---D--R-SIVADGGIKTSGDIVKALAFGADFVMIGGMLAGS 234 (361)
T ss_dssp HHHCCCCC-HHHHHHHHTTS---S--S-EEEEESCCCSHHHHHHHHHTTCSEEEESGGGTTB
T ss_pred ccCCccHH-HHHHHHHHHHh---C--C-CEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCC
Confidence 01 12 34444444322 1 1 888999996 899999999999999999999865
No 103
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=98.28 E-value=1.6e-05 Score=70.77 Aligned_cols=193 Identities=17% Similarity=0.169 Sum_probs=120.3
Q ss_pred EEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEE
Q 023494 63 SILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIV 142 (281)
Q Consensus 63 Sila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~I 142 (281)
-.+..|+.+. .+...+.|+|++|+==.|+.+- .-....++++++.+.+..|+.+-==+.+.+ -++.++++|||.|
T Consensus 27 ~~~~~dP~~~---a~~~~~~gad~lhvvDld~a~~-~~~~~~~~i~~i~~~~~~pl~vGGGIrs~e-~~~~~l~~GadkV 101 (243)
T 4gj1_A 27 KVYKYNPLKK---FKEYEKAGAKELHLVDLTGAKD-PSKRQFALIEKLAKEVSVNLQVGGGIRSKE-EVKALLDCGVKRV 101 (243)
T ss_dssp EECCCCHHHH---HHHHHHHTCCEEEEEEHHHHHC-GGGCCHHHHHHHHHHCCSEEEEESSCCCHH-HHHHHHHTTCSEE
T ss_pred cEeCCCHHHH---HHHHHHCCCCEEEEEecCcccc-cchhHHHHHHHHHHhcCCCeEeccccccHH-HHHHHHHcCCCEE
Confidence 3455666554 4567778999999844454321 122345788888776667766654445533 5778889999999
Q ss_pred EEcccccccccHHHHHHHHHHcCCc---EEEEEC-------------CCC---CHHHHHHhhc-cCCEEEEEeecCCCCC
Q 023494 143 SVHCEQSSTIHLHRTLNQIKDLGAK---AGVVLN-------------PAT---SLSAIECVLD-VVDLVLIMSVNPGFGG 202 (281)
Q Consensus 143 tvh~Ea~~~~~i~~~l~~ik~~G~k---~Glai~-------------p~t---~ie~~~~~l~-~vD~IlvmsV~pG~~G 202 (281)
.+-..+ ..++.-+-+.++++|.. +++... ..| ..+.++.+.+ .+.-|++.+++---..
T Consensus 102 ii~t~a--~~~p~li~e~~~~~g~q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~~~g~~eil~t~Id~DGt~ 179 (243)
T 4gj1_A 102 VIGSMA--IKDATLCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSNKGLKHILCTDISKDGTM 179 (243)
T ss_dssp EECTTT--TTCHHHHHHHHHHHCTTTEEEEEEEEESSSEEEC--------CCBHHHHHHHHHTTTCCEEEEEETTC----
T ss_pred EEcccc--ccCCchHHHHHhcccCceEEEEEEEEeCCCCEEEecCceecccchHHHHHHHHhhcCCcEEEeeeecccccc
Confidence 999875 45666566667777743 333321 011 2244444433 2677888777542122
Q ss_pred CccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCC-CCHHHHHHHH
Q 023494 203 QSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGA-KDYAEAIKGI 270 (281)
Q Consensus 203 Q~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a-~dp~~~~~~l 270 (281)
+-+.-+. ++++++..+ ++++.+.||++ .+++..+ +.+++.+++||+++.. =+.+++.+-+
T Consensus 180 ~G~d~~l---~~~l~~~~~----~ipviasGGv~~~~Dl~~l-~~~~~gvivg~Al~~g~i~l~ea~~~l 241 (243)
T 4gj1_A 180 QGVNVRL---YKLIHEIFP----NICIQASGGVASLKDLENL-KGICSGVIVGKALLDGVFSVEEGIRCL 241 (243)
T ss_dssp -CCCHHH---HHHHHHHCT----TSEEEEESCCCSHHHHHHT-TTTCSEEEECHHHHTTSSCHHHHHHHH
T ss_pred cCCCHHH---HHHHHHhcC----CCCEEEEcCCCCHHHHHHH-HccCchhehHHHHHCCCCCHHHHHHHh
Confidence 3344444 444444432 36888999998 8899886 6689999999999854 4677666554
No 104
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=98.28 E-value=7.4e-06 Score=72.17 Aligned_cols=171 Identities=18% Similarity=0.206 Sum_probs=103.4
Q ss_pred HHHHHcCCCeEEEE--eeeCcccccccCCHHHHHHcC---cCCCCCeeEEEEecC-hh-------------hHHHHHHHc
Q 023494 77 KAVELAGCDWIHVD--VMDGRFVPNITIGPLVVDALR---PVTDLPLDVHLMIVE-PE-------------QRVPDFIKA 137 (281)
Q Consensus 77 ~~l~~~G~d~iHiD--ImDG~fvpn~~~G~~~I~~ir---~~t~~~idaHLmv~d-p~-------------~~i~~~~~a 137 (281)
..+.++|+|.|++= ...|..+|. ..+++.++ +..++| +|.|+.- .+ +-++.+.++
T Consensus 15 ~~A~~~GAdRIELc~~L~~GGlTPS----~g~i~~~~~~~~~~~ip--V~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~ 88 (224)
T 2bdq_A 15 TRLDKAIISRVELCDNLAVGGTTPS----YGVIKEANQYLHEKGIS--VAVMIRPRGGNFVYNDLELRIMEEDILRAVEL 88 (224)
T ss_dssp GGCCTTTCCEEEEEBCGGGTCBCCC----HHHHHHHHHHHHHTTCE--EEEECCSSSSCSCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCCEEEEcCCcccCCcCCC----HHHHHHHHHhhhhcCCc--eEEEECCCCCCCcCCHHHHHHHHHHHHHHHHc
Confidence 35567899999984 455778884 44566666 544544 5558852 21 124567899
Q ss_pred CCCEEEEcccccc-ccc---HHHHHHHHHHcCCcEEE--EECC---CCCHHHHHHhhcc-CCEEEEEeecCCCCCCcc--
Q 023494 138 GADIVSVHCEQSS-TIH---LHRTLNQIKDLGAKAGV--VLNP---ATSLSAIECVLDV-VDLVLIMSVNPGFGGQSF-- 205 (281)
Q Consensus 138 GAd~Itvh~Ea~~-~~~---i~~~l~~ik~~G~k~Gl--ai~p---~t~ie~~~~~l~~-vD~IlvmsV~pG~~GQ~f-- 205 (281)
|+|.|.|..-... .-+ .+++++.++ |+.+-+ ++.. ..+.+.++.+++. +|.||- . +|+.-
T Consensus 89 GadGvV~G~Lt~dg~iD~~~~~~Li~~a~--~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~rILT--S----G~~~~~~ 160 (224)
T 2bdq_A 89 ESDALVLGILTSNNHIDTEAIEQLLPATQ--GLPLVFHMAFDVIPKSDQKKSIDQLVALGFTRILL--H----GSSNGEP 160 (224)
T ss_dssp TCSEEEECCBCTTSSBCHHHHHHHHHHHT--TCCEEECGGGGGSCTTTHHHHHHHHHHTTCCEEEE--C----SCSSCCC
T ss_pred CCCEEEEeeECCCCCcCHHHHHHHHHHhC--CCeEEEECchhccCCcCHHHHHHHHHHcCCCEEEC--C----CCCCCCc
Confidence 9999999976421 112 344444443 555433 3311 2345556655554 888872 2 33333
Q ss_pred chhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHH-HcCCcEEEEccccc-CCCCHHH
Q 023494 206 IESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVI-EAGANALVAGSAVF-GAKDYAE 265 (281)
Q Consensus 206 ~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~-~aGAD~~VvGSaIf-~a~dp~~ 265 (281)
..+.++.|+++.+.. +..+.|.+.||||++|++.+. +.|++-|= ||.|+ ++.||-+
T Consensus 161 a~~g~~~L~~Lv~~a---~~ri~Im~GgGV~~~Ni~~l~~~tGv~e~H-~s~i~~~~~~~~~ 218 (224)
T 2bdq_A 161 IIENIKHIKALVEYA---NNRIEIMVGGGVTAENYQYICQETGVKQAH-GTRITQMAGDPLE 218 (224)
T ss_dssp GGGGHHHHHHHHHHH---TTSSEEEECSSCCTTTHHHHHHHHTCCEEE-ETTCC--------
T ss_pred HHHHHHHHHHHHHhh---CCCeEEEeCCCCCHHHHHHHHHhhCCCEEc-cccccCCCCCcch
Confidence 566777777776653 235889999999999999997 68998776 45554 5566643
No 105
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.27 E-value=6.8e-06 Score=80.21 Aligned_cols=181 Identities=18% Similarity=0.173 Sum_probs=90.5
Q ss_pred cCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcC---C------CCCeeEEEEec---ChhhHHHHHHHc
Q 023494 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV---T------DLPLDVHLMIV---EPEQRVPDFIKA 137 (281)
Q Consensus 70 ~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~---t------~~~idaHLmv~---dp~~~i~~~~~a 137 (281)
..+.+.++.+.+.++..+.|==-+|.++ |.-..+.|.+. + +..+.+-..+. +..+.++.+.++
T Consensus 166 ~~l~ea~~~m~~~~i~~lpVVDe~g~lv-----GiIT~~Dil~~~~~p~a~kd~~grl~v~aavG~~~~~~~~a~~l~~a 240 (490)
T 4avf_A 166 TPLEEMKAKLYENRIEKMLVVDENFYLR-----GLVTFRDIEKAKTYPLASKDEQGRLRVGAAVGTGADTGERVAALVAA 240 (490)
T ss_dssp ----------------------------------------------CTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHcCCCEEEEEcCCCcEE-----EEEehHHhhhhccCcchhhhccCcceeeeeeccccchHHHHHHHhhc
Confidence 3566777777777776654411124333 33344444222 1 12333333443 334567788999
Q ss_pred CCCEEEEcccccccccHHHHHHHHHHc--CCcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCC-C----CccchhH
Q 023494 138 GADIVSVHCEQSSTIHLHRTLNQIKDL--GAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFG-G----QSFIESQ 209 (281)
Q Consensus 138 GAd~Itvh~Ea~~~~~i~~~l~~ik~~--G~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~-G----Q~f~~~~ 209 (281)
|+|.|.++..........+.++++++. ++.+.+- +. ...+..+.+.+ .+|+|.+ +.-||.. + ..+-...
T Consensus 241 G~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g-~v-~t~e~a~~l~~aGaD~I~v-g~g~Gs~~~t~~~~g~g~p~ 317 (490)
T 4avf_A 241 GVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGG-NI-ATAEAAKALAEAGADAVKV-GIGPGSICTTRIVAGVGVPQ 317 (490)
T ss_dssp TCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEE-EE-CSHHHHHHHHHTTCSEEEE-CSSCSTTCHHHHHTCBCCCH
T ss_pred ccceEEecccCCcchhHHHHHHHHHHHCCCceEEEe-ee-CcHHHHHHHHHcCCCEEEE-CCCCCcCCCccccCCCCccH
Confidence 999999986543223456788888875 4444442 11 34556666655 4999986 3334321 0 0121224
Q ss_pred HHHHHHHHHHhhhcCCCCeEEEecCC-ChhcHHHHHHcCCcEEEEcccccCC
Q 023494 210 VKKISDLRRMCLEKGVNPWIEVDGGV-GPKNAYKVIEAGANALVAGSAVFGA 260 (281)
Q Consensus 210 l~kI~~lr~l~~~~~~~~~I~VDGGI-~~e~i~~~~~aGAD~~VvGSaIf~a 260 (281)
+.-|.++++...+ .+++|..|||| +.+++.+++++|||.+.+||++...
T Consensus 318 ~~~l~~v~~~~~~--~~iPVIa~GGI~~~~di~kal~~GAd~V~vGs~~~~~ 367 (490)
T 4avf_A 318 ISAIANVAAALEG--TGVPLIADGGIRFSGDLAKAMVAGAYCVMMGSMFAGT 367 (490)
T ss_dssp HHHHHHHHHHHTT--TTCCEEEESCCCSHHHHHHHHHHTCSEEEECTTTTTB
T ss_pred HHHHHHHHHHhcc--CCCcEEEeCCCCCHHHHHHHHHcCCCeeeecHHHhcC
Confidence 5556666665533 35889999999 5999999999999999999998863
No 106
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=98.21 E-value=2.1e-05 Score=70.53 Aligned_cols=165 Identities=17% Similarity=0.235 Sum_probs=103.9
Q ss_pred CHHHHHHHHHHcCCCeEEEE--eeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecC-hh-------------hHHHHH
Q 023494 71 KLGEQVKAVELAGCDWIHVD--VMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVE-PE-------------QRVPDF 134 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiD--ImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~d-p~-------------~~i~~~ 134 (281)
++++ ...+.++|+|.|++= ...|+.+|. ..+++.+++..++| +|.|+.. .+ +-++.+
T Consensus 10 s~~~-a~~A~~~GAdRIELc~~L~~GGlTPS----~g~i~~~~~~~~ip--v~vMIRPR~GdF~Ys~~E~~~M~~Di~~~ 82 (256)
T 1twd_A 10 SMEC-ALTAQQNGADRVELCAAPKEGGLTPS----LGVLKSVRQRVTIP--VHPIIRPRGGDFCYSDGEFAAILEDVRTV 82 (256)
T ss_dssp SHHH-HHHHHHTTCSEEEECBCGGGTCBCCC----HHHHHHHHHHCCSC--EEEBCCSSSSCSCCCHHHHHHHHHHHHHH
T ss_pred CHHH-HHHHHHcCCCEEEEcCCcccCCCCCC----HHHHHHHHHHcCCc--eEEEECCCCCCCcCCHHHHHHHHHHHHHH
Confidence 4444 446667899999983 455778884 45567777666655 5558852 21 124567
Q ss_pred HHcCCCEEEEcccccc-ccc---HHHHHHHHHHcCCcEEE--EEC-CCCCHHHHHHhhc-cCCEEEEEeecCCCCCCccc
Q 023494 135 IKAGADIVSVHCEQSS-TIH---LHRTLNQIKDLGAKAGV--VLN-PATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFI 206 (281)
Q Consensus 135 ~~aGAd~Itvh~Ea~~-~~~---i~~~l~~ik~~G~k~Gl--ai~-p~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f~ 206 (281)
.++|+|+|.|..-... .-+ .+++++.++ |+.+-+ ++. ...+.+.++.+++ .+|.||- . +|++-.
T Consensus 83 ~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~--~~~vTFHRAfD~~~d~~~ale~L~~lG~~rILT--S----G~~~~a 154 (256)
T 1twd_A 83 RELGFPGLVTGVLDVDGNVDMPRMEKIMAAAG--PLAVTFHRAFDMCANPLYTLNNLAELGIARVLT--S----GQKSDA 154 (256)
T ss_dssp HHTTCSEEEECCBCTTSSBCHHHHHHHHHHHT--TSEEEECGGGGGCSCHHHHHHHHHHHTCCEEEE--C----TTSSST
T ss_pred HHcCCCEEEEeeECCCCCcCHHHHHHHHHHhC--CCcEEEECchhccCCHHHHHHHHHHcCCCEEEC--C----CCCCCH
Confidence 8999999999976421 122 334444432 444332 221 1234555655555 3888872 2 334444
Q ss_pred hhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEc
Q 023494 207 ESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAG 254 (281)
Q Consensus 207 ~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvG 254 (281)
.+.++.|+++.+ ..+ .+.|-+.||||++|++.+.+.|++-|=.+
T Consensus 155 ~~g~~~L~~Lv~---~a~-~i~Im~GgGv~~~Ni~~l~~tGv~e~H~S 198 (256)
T 1twd_A 155 LQGLSKIMELIA---HRD-APIIMAGAGVRAENLHHFLDAGVLEVHSS 198 (256)
T ss_dssp TTTHHHHHHHHT---SSS-CCEEEEESSCCTTTHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHHH---hhC-CcEEEecCCcCHHHHHHHHHcCCCeEeEC
Confidence 566666666654 334 68899999999999999999999988755
No 107
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=98.21 E-value=2.5e-05 Score=68.96 Aligned_cols=157 Identities=18% Similarity=0.211 Sum_probs=104.8
Q ss_pred HHHHHcCcCCCCCeeEEEEecChhh---H-----HHHHHHcCCCEEEEc-cc--ccccccHHHHHHHHHHcCCcEEEEEC
Q 023494 105 LVVDALRPVTDLPLDVHLMIVEPEQ---R-----VPDFIKAGADIVSVH-CE--QSSTIHLHRTLNQIKDLGAKAGVVLN 173 (281)
Q Consensus 105 ~~I~~ir~~t~~~idaHLmv~dp~~---~-----i~~~~~aGAd~Itvh-~E--a~~~~~i~~~l~~ik~~G~k~Glai~ 173 (281)
..+..+++..++|+.+. =.+|.. | +.++.++|||+|.+. .| . ...++.+.++.++++|+.+-+-+.
T Consensus 49 ~~L~~v~~~~~i~v~aQ--dv~~~~~Ga~TGeis~~~l~~~Ga~~VllghseRR~-~~~e~~~k~~~A~~~GL~~ivcVg 125 (225)
T 1hg3_A 49 VDLRMIAESVEIPVFAQ--HIDPIKPGSHTGHVLPEAVKEAGAVGTLLNHSENRM-ILADLEAAIRRAEEVGLMTMVCSN 125 (225)
T ss_dssp HHHHHHHHSCSSCBEES--CCCSCCSBSCTTCCCHHHHHHTTCCEEEESCGGGCC-BHHHHHHHHHHHHHHTCEEEEEES
T ss_pred HHHHHHHHhcCCceeee--eCCcccCCCccCcccHHHHHHcCCCEEEECcchhcC-CHHHHHHHHHHHHHCCCEEEEEeC
Confidence 34556665555565541 123321 1 778999999988775 44 2 234578889999999999999886
Q ss_pred CCCCHHHHHHhhc-cCCEEEEEeecCCC---CC---CccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChh-cHHHHHH
Q 023494 174 PATSLSAIECVLD-VVDLVLIMSVNPGF---GG---QSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPK-NAYKVIE 245 (281)
Q Consensus 174 p~t~ie~~~~~l~-~vD~IlvmsV~pG~---~G---Q~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e-~i~~~~~ 245 (281)
- ..| .+.+.. ..++| .++|-. +| +.+.++.++...++.+.+.+ +..|.-.|||+.. ....+.+
T Consensus 126 e--~~e-~~~~~~~~~~iI---ayep~waiGtG~~v~t~~~d~~~~~~~~ir~~~~---~~~ilyggsV~~~n~~~~~~~ 196 (225)
T 1hg3_A 126 N--PAV-SAAVAALNPDYV---AVEPPELIGTGIPVSKAKPEVITNTVELVKKVNP---EVKVLCGAGISTGEDVKKAIE 196 (225)
T ss_dssp S--HHH-HHHHHTTCCSEE---EECCTTTTTTSCCTTTSCTHHHHHHHHHHHHHCT---TSEEEEESSCCSHHHHHHHHH
T ss_pred C--HHH-HHHHhcCCCCEE---EEeChhhhccCCCCCCCChhHHHHHHHHHHhccC---CCEEEEeCCCCcHHHHHHHHh
Confidence 3 222 222222 23444 456643 35 67877755554444333332 4678889999955 5567789
Q ss_pred cCCcEEEEcccccCCCCHHHHHHHHHHh
Q 023494 246 AGANALVAGSAVFGAKDYAEAIKGIKTS 273 (281)
Q Consensus 246 aGAD~~VvGSaIf~a~dp~~~~~~l~~~ 273 (281)
.|+|.+-+|+++.+++|+.+.++++.+.
T Consensus 197 ~~vDG~LVG~a~l~a~~~~~~i~~l~~~ 224 (225)
T 1hg3_A 197 LGTVGVLLASGVTKAKDPEKAIWDLVSG 224 (225)
T ss_dssp TTCSEEEESHHHHTCSSHHHHHHHHHHT
T ss_pred CCCCEEEeCHHHHCCcCHHHHHHHHHhh
Confidence 9999999999999999999999888654
No 108
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=98.17 E-value=1.3e-05 Score=73.03 Aligned_cols=94 Identities=19% Similarity=0.299 Sum_probs=68.9
Q ss_pred cHHHHHHHHHHcCC--cEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeE
Q 023494 153 HLHRTLNQIKDLGA--KAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWI 229 (281)
Q Consensus 153 ~i~~~l~~ik~~G~--k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I 229 (281)
++.+.++.+|++.. ++.+.+. .++++++.+. .+|+|++-. |.|+.+ +++.+.++..+.+++|
T Consensus 180 ~i~~av~~ar~~~~~~~I~Vev~---t~eea~eal~aGaD~I~LDn---------~~~~~~---~~~v~~l~~~~~~v~i 244 (284)
T 1qpo_A 180 SVVDALRAVRNAAPDLPCEVEVD---SLEQLDAVLPEKPELILLDN---------FAVWQT---QTAVQRRDSRAPTVML 244 (284)
T ss_dssp SHHHHHHHHHHHCTTSCEEEEES---SHHHHHHHGGGCCSEEEEET---------CCHHHH---HHHHHHHHHHCTTCEE
T ss_pred CHHHHHHHHHHhCCCCCEEEEeC---CHHHHHHHHHcCCCEEEECC---------CCHHHH---HHHHHHhhccCCCeEE
Confidence 46678888888765 7888775 3677777666 499987632 444443 3334444332345799
Q ss_pred EEecCCChhcHHHHHHcCCcEEEEcccccCCC
Q 023494 230 EVDGGVGPKNAYKVIEAGANALVAGSAVFGAK 261 (281)
Q Consensus 230 ~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a~ 261 (281)
++.||||++|++++.+.|+|++++|+.+.+++
T Consensus 245 eaSGGIt~~~i~~~a~tGVD~isvG~l~~~a~ 276 (284)
T 1qpo_A 245 ESSGGLSLQTAATYAETGVDYLAVGALTHSVR 276 (284)
T ss_dssp EEESSCCTTTHHHHHHTTCSEEECGGGTSSBC
T ss_pred EEECCCCHHHHHHHHhcCCCEEEECHHHcCCC
Confidence 99999999999999999999999999887654
No 109
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=98.17 E-value=1.6e-05 Score=72.34 Aligned_cols=165 Identities=13% Similarity=0.085 Sum_probs=101.2
Q ss_pred HHHHHHHcCCCeEEEEeeeCcccccccC-CHHHHHHcCcCCCCCeeEEEE--ecChhhHHHHHHHcCCCEEEEccccccc
Q 023494 75 QVKAVELAGCDWIHVDVMDGRFVPNITI-GPLVVDALRPVTDLPLDVHLM--IVEPEQRVPDFIKAGADIVSVHCEQSST 151 (281)
Q Consensus 75 ~l~~l~~~G~d~iHiDImDG~fvpn~~~-G~~~I~~ir~~t~~~idaHLm--v~dp~~~i~~~~~aGAd~Itvh~Ea~~~ 151 (281)
.++.+.+.|.|.|-|. -+|. .|+.. =.++++++|+.+++|+..|.= +.|+... .-|||.+.|..-- +.
T Consensus 58 ~~~~~~~sGtDai~VG-S~~v--t~~~~~~~~~v~~ik~~~~lPvil~fPP~~g~~~~i-----~~~aDa~l~psvl-Ns 128 (286)
T 3vk5_A 58 KAAELTRLGFAAVLLA-STDY--ESFESHMEPYVAAVKAATPLPVVLHFPPRPGAGFPV-----VRGADALLLPALL-GS 128 (286)
T ss_dssp HHHHHHHTTCSCEEEE-CSCC--SSHHHHHHHHHHHHHHHCSSCEEEECCCBTTTBSCC-----CTTCSEEEEEEET-TB
T ss_pred HHHHHHhcCCCEEEEc-cCCC--CcchHHHHHHHHHHHHhCCCCEEEECCCCCCCcccc-----ccCCCEEEEEEEe-cC
Confidence 5677778899999886 4442 21111 235688888877888876543 1344322 3489999998553 23
Q ss_pred ccHHHHHHH---------H----HHcCCcE----EEEECCC------------CCHHHH--HHhhcc-C----CEEEEEe
Q 023494 152 IHLHRTLNQ---------I----KDLGAKA----GVVLNPA------------TSLSAI--ECVLDV-V----DLVLIMS 195 (281)
Q Consensus 152 ~~i~~~l~~---------i----k~~G~k~----Glai~p~------------t~ie~~--~~~l~~-v----D~Ilvms 195 (281)
.++.-++.. + +++| ++ .+.++++ ++.+.. ..|... . ++|. +
T Consensus 129 ~n~~~i~g~~~~~~aa~~v~~~~~~~g-e~ip~gYL~v~~g~k~V~fv~~~~~~~~e~A~~~aYa~~gad~G~~lV~-L- 205 (286)
T 3vk5_A 129 GDDYFVWKSFLETLAAFPGRIPREEWP-ELLLTVALTFGEDPRTGDLLGTVPVSTASTEEIDRYLHVARAFGFHMVY-L- 205 (286)
T ss_dssp SSHHHHTHHHHHHHHHCSTTSCGGGCC-EEEEEEEEECSCCHHHHHHHCBCCCCCSSSHHHHHHHHHHHHTTCSEEE-E-
T ss_pred CCcccccCcHHHHHHhHHHHHHHHHhC-CcceEEEEEECCCCceeeeeCCCCCCCHHHHHHHHHHHHHHHcCCCEEE-E-
Confidence 334333333 4 6666 43 3567766 122332 333221 2 3443 3
Q ss_pred ecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCC
Q 023494 196 VNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGA 260 (281)
Q Consensus 196 V~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a 260 (281)
+-+ + .+...+.|+++++... .++++.|.|||+ .+.+.+++++|||.+|+||++++.
T Consensus 206 -D~~--~---~~v~~e~V~~I~~~~~---~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAav~d 262 (286)
T 3vk5_A 206 -YSR--N---EHVPPEVVRHFRKGLG---PDQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALEQP 262 (286)
T ss_dssp -ECS--S---SCCCHHHHHHHHHHSC---TTCEEEEESSCCSHHHHHHHHHTTCSEEEESGGGSST
T ss_pred -cCC--C---CcCCHHHHHHHHHhcC---CCCCEEEEeCCCCHHHHHHHHHcCCCEEEECchhhcC
Confidence 222 2 2333455666666542 136899999998 899999999999999999999975
No 110
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=98.17 E-value=4e-05 Score=69.56 Aligned_cols=194 Identities=16% Similarity=0.159 Sum_probs=129.3
Q ss_pred HHHHHHcCCCeEEEE-----eeeCc--ccccccCC------HHHHHHcCcC-CCCCeeEEEEecChh----hHHHHHHHc
Q 023494 76 VKAVELAGCDWIHVD-----VMDGR--FVPNITIG------PLVVDALRPV-TDLPLDVHLMIVEPE----QRVPDFIKA 137 (281)
Q Consensus 76 l~~l~~~G~d~iHiD-----ImDG~--fvpn~~~G------~~~I~~ir~~-t~~~idaHLmv~dp~----~~i~~~~~a 137 (281)
-+..+++|+|+|=+- =|.|. +.-.+.|| .++-+++-.. .+.|+.+-+--.||. .+++.+.++
T Consensus 41 Ak~~e~gGaDlii~ynsGrfR~~G~~slag~lpygnaN~iv~e~~~evlp~v~~iPV~Agv~~~DP~~~~g~~Le~lk~~ 120 (286)
T 2p10_A 41 AKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIVVDMAREVLPVVRHTPVLAGVNGTDPFMVMSTFLRELKEI 120 (286)
T ss_dssp HHHHHHTTCSEEEECHHHHHHHTTCCGGGGGBTEEEHHHHHHHHHHHHGGGCSSSCEEEEECTTCTTCCHHHHHHHHHHH
T ss_pred hHHHHhCCCCEEEEeccchhhhcCccchhhhccccCHHHHHHHHHHhhhccCCCCCEEEEECCcCCCcCHHHHHHHHHHh
Confidence 456778999997442 12331 00011121 2223333332 367899986668996 467788999
Q ss_pred CCCEEEEcc--------------ccc-ccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCC
Q 023494 138 GADIVSVHC--------------EQS-STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFG 201 (281)
Q Consensus 138 GAd~Itvh~--------------Ea~-~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~ 201 (281)
|+..+.=|. |.. ......+.++.+++.|+..-+-.. ..+..+.... .+|+|.+ |||.+
T Consensus 121 Gf~Gv~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~Ti~~v~---~~eeA~amA~agpDiI~~---h~glT 194 (286)
T 2p10_A 121 GFAGVQNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLTTPYVF---SPEDAVAMAKAGADILVC---HMGLT 194 (286)
T ss_dssp TCCEEEECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEECCEEC---SHHHHHHHHHHTCSEEEE---ECSCC
T ss_pred CCceEEECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHHCCCeEEEecC---CHHHHHHHHHcCCCEEEE---CCCCC
Confidence 999998888 642 133566888899999987655332 4455555554 5899865 67732
Q ss_pred -------CCc-cchhHHHHHHHHHHHhhhcCCCCeEEEec-CCC-hhcHHHHHHc--CCcEEEEcccccCCCCHHHHHHH
Q 023494 202 -------GQS-FIESQVKKISDLRRMCLEKGVNPWIEVDG-GVG-PKNAYKVIEA--GANALVAGSAVFGAKDYAEAIKG 269 (281)
Q Consensus 202 -------GQ~-f~~~~l~kI~~lr~l~~~~~~~~~I~VDG-GI~-~e~i~~~~~a--GAD~~VvGSaIf~a~dp~~~~~~ 269 (281)
+.. -..+..++++++.+...+-+.++.+-.-| ||+ ++.+..+++. |+|.|+.+|++-+.+ |++++.+
T Consensus 195 ~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIstpeDv~~~l~~t~G~~G~~gASsier~p-~e~ai~~ 273 (286)
T 2p10_A 195 TGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPEDARFILDSCQGCHGFYGASSMERLP-AEEAIRS 273 (286)
T ss_dssp ---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCSHHHHHHHHHHCTTCCEEEESHHHHHHH-HHHHHHH
T ss_pred CCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCHHHHHHHHhcCCCccEEEeehhhhcCC-HHHHHHH
Confidence 222 22444667777777777666677655555 887 8999999999 999999999999988 9988888
Q ss_pred HHHhcCc
Q 023494 270 IKTSKRP 276 (281)
Q Consensus 270 l~~~~~~ 276 (281)
+-+.++.
T Consensus 274 ~~~~fk~ 280 (286)
T 2p10_A 274 QTLAFKA 280 (286)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 7776553
No 111
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=98.17 E-value=5.9e-06 Score=75.43 Aligned_cols=93 Identities=16% Similarity=0.239 Sum_probs=69.1
Q ss_pred HHHHHHHHHHcC---CcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeE
Q 023494 154 LHRTLNQIKDLG---AKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWI 229 (281)
Q Consensus 154 i~~~l~~ik~~G---~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I 229 (281)
+...++.+|+.. .++++... .++++++.+. .+|+|++-. |.++.+ +++.+.++..+.++++
T Consensus 179 i~~av~~ar~~~~~~~~I~VEV~---tleea~eA~~aGaD~I~LDn---------~~~e~l---~~av~~l~~~~~~v~i 243 (285)
T 1o4u_A 179 AERAVQEVRKIIPFTTKIEVEVE---NLEDALRAVEAGADIVMLDN---------LSPEEV---KDISRRIKDINPNVIV 243 (285)
T ss_dssp HHHHHHHHHTTSCTTSCEEEEES---SHHHHHHHHHTTCSEEEEES---------CCHHHH---HHHHHHHHHHCTTSEE
T ss_pred HHHHHHHHHHhCCCCceEEEEeC---CHHHHHHHHHcCCCEEEECC---------CCHHHH---HHHHHHhhccCCCceE
Confidence 566888888876 78888764 3666666655 599997632 444444 4444444432335799
Q ss_pred EEecCCChhcHHHHHHcCCcEEEEcccccCCC
Q 023494 230 EVDGGVGPKNAYKVIEAGANALVAGSAVFGAK 261 (281)
Q Consensus 230 ~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a~ 261 (281)
++.||||++|++++.+.|+|++.+|+.+++++
T Consensus 244 eASGGIt~eni~~~a~tGVD~IsvGslt~sa~ 275 (285)
T 1o4u_A 244 EVSGGITEENVSLYDFETVDVISSSRLTLQEV 275 (285)
T ss_dssp EEEECCCTTTGGGGCCTTCCEEEEGGGTSSCC
T ss_pred EEECCCCHHHHHHHHHcCCCEEEEeHHHcCCC
Confidence 99999999999999999999999999998764
No 112
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=98.14 E-value=2.1e-05 Score=69.46 Aligned_cols=136 Identities=18% Similarity=0.185 Sum_probs=94.0
Q ss_pred HHHHHHcCCCEEEEc-cc--ccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCCEEEEEeecCCC---CC--
Q 023494 131 VPDFIKAGADIVSVH-CE--QSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGF---GG-- 202 (281)
Q Consensus 131 i~~~~~aGAd~Itvh-~E--a~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG~---~G-- 202 (281)
+.++.++|||+|.+. .| . ...++.+.++.++++|+.+-+-+.-....+.+..+ ..++| .++|-. +|
T Consensus 78 ~~~l~~~Ga~~VllghseRR~-~~~e~~~k~~~A~~~GL~~ivcVge~~e~~~~~~~--~~~iI---ayep~waiGtG~~ 151 (226)
T 1w0m_A 78 LENIKEAGGSGVILNHSEAPL-KLNDLARLVAKAKSLGLDVVVCAPDPRTSLAAAAL--GPHAV---AVEPPELIGTGRA 151 (226)
T ss_dssp HHHHHHHTCCEEEECCTTSCC-BHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT--CCSEE---EECCGGGTTTSCC
T ss_pred HHHHHHcCCCEEEEeeeeccC-CHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcC--CCCEE---EEcChhhhccCCC
Confidence 778999999987765 44 2 23457888999999999999988632222222221 23555 446632 35
Q ss_pred -CccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChh-cHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhcC
Q 023494 203 -QSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPK-NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKR 275 (281)
Q Consensus 203 -Q~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e-~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~~ 275 (281)
+.+.++.++...++.+.+. .+..|.-.|||+.. ....+.+.|+|.+-+|+++.+++|+.+.++++.+.+.
T Consensus 152 v~t~~~d~~~~~~~~ir~~~---~~~~ilyggsV~~~n~~~~~~~~giDG~LVG~a~l~a~~~~~~i~~l~~~~~ 223 (226)
T 1w0m_A 152 VSRYKPEAIVETVGLVSRHF---PEVSVITGAGIESGDDVAAALRLGTRGVLLASAAVKAKDPYAKIVELAKPLS 223 (226)
T ss_dssp HHHHCHHHHHHHHHHHHHHC---TTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTCSSHHHHHHHHHHHHH
T ss_pred CCCCChhHHHHHHHHHHhcc---CCCEEEEeCCCCcHHHHHHHHhCCCCEEEECHHHHCCcCHHHHHHHHHHHHH
Confidence 4666665544444333332 24678889999955 5567789999999999999999999999998877543
No 113
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=98.14 E-value=4.7e-05 Score=70.27 Aligned_cols=151 Identities=19% Similarity=0.129 Sum_probs=98.0
Q ss_pred HHHHcCcC-CCCCeeEEEEecC-------hhhHHHHHH--HcCCCEEEEccccccc---------ccHHHHHHHHHHc--
Q 023494 106 VVDALRPV-TDLPLDVHLMIVE-------PEQRVPDFI--KAGADIVSVHCEQSST---------IHLHRTLNQIKDL-- 164 (281)
Q Consensus 106 ~I~~ir~~-t~~~idaHLmv~d-------p~~~i~~~~--~aGAd~Itvh~Ea~~~---------~~i~~~l~~ik~~-- 164 (281)
+++.+++. .+.++.+.+.-++ +..|.+.+. +.|+|+|.+|.-+... ..+.++++++|+.
T Consensus 123 ~~~~~~~~~~~~~~~v~i~~~~~~~i~~~~~~~~~aa~~~~~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~ 202 (336)
T 1f76_A 123 LVENVKKAHYDGVLGINIGKNKDTPVEQGKDDYLICMEKIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQN 202 (336)
T ss_dssp HHHHHHHCCCCSEEEEEECCCTTSCGGGTHHHHHHHHHHHGGGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcccCCcEEEEecCCCCCcccccHHHHHHHHHHHhccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHH
Confidence 44555443 3457888887665 556655442 3489999999754110 1234677777764
Q ss_pred --------CCcEEEEECCCCCHHHHHHh----hc-cCCEEEEEeecCC---------------CCCCccchhHHHHHHHH
Q 023494 165 --------GAKAGVVLNPATSLSAIECV----LD-VVDLVLIMSVNPG---------------FGGQSFIESQVKKISDL 216 (281)
Q Consensus 165 --------G~k~Glai~p~t~ie~~~~~----l~-~vD~IlvmsV~pG---------------~~GQ~f~~~~l~kI~~l 216 (281)
++.+.+=++++...+.+.++ .+ .+|+|.+...-.+ ..|....+..++.++++
T Consensus 203 ~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i 282 (336)
T 1f76_A 203 DLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRL 282 (336)
T ss_dssp HHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHH
T ss_pred hhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHH
Confidence 67788888887665443332 22 3899976422111 12222234566777788
Q ss_pred HHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccC
Q 023494 217 RRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFG 259 (281)
Q Consensus 217 r~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~ 259 (281)
++..+. +++|...|||+ .+.+.+++++|||.+-+||++..
T Consensus 283 ~~~~~~---~ipVi~~GGI~~~~da~~~l~~GAd~V~igr~~l~ 323 (336)
T 1f76_A 283 SLELNG---RLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIF 323 (336)
T ss_dssp HHHHTT---SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred HHHhCC---CCCEEEECCCCCHHHHHHHHHCCCCEEEeeHHHHh
Confidence 776532 47899999998 89999999999999999999663
No 114
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.13 E-value=4.5e-05 Score=74.58 Aligned_cols=124 Identities=19% Similarity=0.244 Sum_probs=85.5
Q ss_pred hhHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHc--CCcEEE-EECCCCCHHHHHHhhc-cCCEEEEEeecCCCC--
Q 023494 128 EQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL--GAKAGV-VLNPATSLSAIECVLD-VVDLVLIMSVNPGFG-- 201 (281)
Q Consensus 128 ~~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~--G~k~Gl-ai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~-- 201 (281)
.+.++.+.++|+|.|.+|.-........+.++++++. ++.+.+ .+ +..+..+.+.+ .+|+|.+ +.+||..
T Consensus 257 ~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~~~v---~t~~~a~~l~~aGad~I~v-g~~~G~~~~ 332 (514)
T 1jcn_A 257 KYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNV---VTAAQAKNLIDAGVDGLRV-GMGCGSICI 332 (514)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEEEEE---CSHHHHHHHHHHTCSEEEE-CSSCSCCBT
T ss_pred HHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEeccc---chHHHHHHHHHcCCCEEEE-CCCCCcccc
Confidence 3456778899999999987643122345788889887 777654 23 34666666655 4999988 7777631
Q ss_pred CCc---c---chhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCC
Q 023494 202 GQS---F---IESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGA 260 (281)
Q Consensus 202 GQ~---f---~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a 260 (281)
... + .+..+..+.++++ . .+++|..+|||+ .+++.+++.+|||.+.+||++...
T Consensus 333 t~~~~~~g~~~~~~~~~~~~~~~---~--~~ipVia~GGI~~~~di~kala~GAd~V~iG~~~l~~ 393 (514)
T 1jcn_A 333 TQEVMACGRPQGTAVYKVAEYAR---R--FGVPIIADGGIQTVGHVVKALALGASTVMMGSLLAAT 393 (514)
T ss_dssp TBCCCSCCCCHHHHHHHHHHHHG---G--GTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTS
T ss_pred cccccCCCccchhHHHHHHHHHh---h--CCCCEEEECCCCCHHHHHHHHHcCCCeeeECHHHHcC
Confidence 000 1 1333444444443 2 247899999997 789999999999999999998764
No 115
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=98.12 E-value=3.7e-05 Score=76.14 Aligned_cols=189 Identities=14% Similarity=0.139 Sum_probs=115.7
Q ss_pred HHHHHHHHHcCCCeEEEEeeeCccc--ccccCCHHHHHHcCcCCCCCeeEEEEecChh----------hHHHHHHHcCCC
Q 023494 73 GEQVKAVELAGCDWIHVDVMDGRFV--PNITIGPLVVDALRPVTDLPLDVHLMIVEPE----------QRVPDFIKAGAD 140 (281)
Q Consensus 73 ~~~l~~l~~~G~d~iHiDImDG~fv--pn~~~G~~~I~~ir~~t~~~idaHLmv~dp~----------~~i~~~~~aGAd 140 (281)
.+..+.+.+.|+|++|+==+|+..- ++-.-..+.++++++..+.|+.+-==+.+.. +-++.+.++|||
T Consensus 283 ~~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aGad 362 (555)
T 1jvn_A 283 VQLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGAD 362 (555)
T ss_dssp HHHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHHHcCCC
Confidence 3455667788999999855565211 1112236778888776666665432334421 347788999999
Q ss_pred EEEEcccccccccH------------HHHHHHH-HHcCC-cEEEEECCC-------------------------------
Q 023494 141 IVSVHCEQSSTIHL------------HRTLNQI-KDLGA-KAGVVLNPA------------------------------- 175 (281)
Q Consensus 141 ~Itvh~Ea~~~~~i------------~~~l~~i-k~~G~-k~Glai~p~------------------------------- 175 (281)
.|.+-..+. .++ .+.++++ +++|. ++.+++...
T Consensus 363 ~V~igt~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ivv~iD~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 440 (555)
T 1jvn_A 363 KVSIGTDAV--YAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQADTKNKVFETEYPGPNGEKYCWYQ 440 (555)
T ss_dssp EEEECHHHH--HHHHHHHHTTSCCCSCSHHHHHHHHHCGGGEEEEECEEEEEESSGGGCSSCCEECSSCCTTCCCEEEEE
T ss_pred EEEECCHHh--hCchhhccccccccCHHHHHHHHHHhCCCcEEEEEEccccccccccccccccccccccCCCCCcceeEE
Confidence 999997652 111 1234433 45573 444444321
Q ss_pred ------------CCHHHHHHhhcc-CCEEEEEeecC-CCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcH
Q 023494 176 ------------TSLSAIECVLDV-VDLVLIMSVNP-GFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNA 240 (281)
Q Consensus 176 ------------t~ie~~~~~l~~-vD~IlvmsV~p-G~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i 240 (281)
+.++..+.+.+. ++.|++.++.. |.. +.+ .++.++++++.. ++++.+-|||+ ++.+
T Consensus 441 v~~~Gw~~~~~~~~~e~a~~~~~~Ga~~il~t~~~~dG~~-~G~---d~~li~~l~~~~-----~iPVIasGGi~s~~d~ 511 (555)
T 1jvn_A 441 CTIKGGRESRDLGVWELTRACEALGAGEILLNCIDKDGSN-SGY---DLELIEHVKDAV-----KIPVIASSGAGVPEHF 511 (555)
T ss_dssp EEETTTTEEEEEEHHHHHHHHHHTTCCEEEECCGGGTTTC-SCC---CHHHHHHHHHHC-----SSCEEECSCCCSHHHH
T ss_pred EEEecCccCCCCCHHHHHHHHHHcCCCEEEEeCCCCCCCC-CCC---CHHHHHHHHHhC-----CccEEEECCCCCHHHH
Confidence 123555555444 89998876653 321 123 255566666543 47888999996 8999
Q ss_pred HHHHH-cCCcEEEEcccccCCC-CHHHHHHHHHH
Q 023494 241 YKVIE-AGANALVAGSAVFGAK-DYAEAIKGIKT 272 (281)
Q Consensus 241 ~~~~~-aGAD~~VvGSaIf~a~-dp~~~~~~l~~ 272 (281)
..+.+ .|+|.+++||+++..+ +..+..+.+++
T Consensus 512 ~~~~~~~G~~gvivg~a~~~~~~~~~e~~~~l~~ 545 (555)
T 1jvn_A 512 EEAFLKTRADACLGAGMFHRGEFTVNDVKEYLLE 545 (555)
T ss_dssp HHHHHHSCCSEEEESHHHHTTSCCHHHHHHHHHH
T ss_pred HHHHHhcCChHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 99988 8999999999998764 55555544443
No 116
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=98.11 E-value=9e-05 Score=64.38 Aligned_cols=173 Identities=19% Similarity=0.197 Sum_probs=108.0
Q ss_pred cCHHHHHHHHHHcCCCeEEEEeeeCccccc-c-cCCHHHHHHcCcC-CCCCeeEEEEecChhh-HHHHHHHcCCCEEEEc
Q 023494 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPN-I-TIGPLVVDALRPV-TDLPLDVHLMIVEPEQ-RVPDFIKAGADIVSVH 145 (281)
Q Consensus 70 ~~l~~~l~~l~~~G~d~iHiDImDG~fvpn-~-~~G~~~I~~ir~~-t~~~idaHLmv~dp~~-~i~~~~~aGAd~Itvh 145 (281)
.+. +.++.+.++|+|++=+- |.|. - ...++..++|.+. ++...-|=+.++.+.. ..+.+.+.+.|.|-+|
T Consensus 10 t~~-eda~~a~~~GaD~iGfi-----f~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLH 83 (205)
T 1nsj_A 10 TNL-EDALFSVESGADAVGFV-----FYPKSKRYISPEDARRISVELPPFVFRVGVFVNEEPEKILDVASYVQLNAVQLH 83 (205)
T ss_dssp CSH-HHHHHHHHHTCSEEEEE-----CCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSCCHHHHHHHHHHHTCSEEEEC
T ss_pred CcH-HHHHHHHHcCCCEEEEE-----ecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEEC
Confidence 344 45677778899997442 2232 1 3466777777543 3344445557765444 4556678899999999
Q ss_pred ccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhcc-CCEEEEEeecC--CCCCCccchhHHHHHHHHHHHhhh
Q 023494 146 CEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV-VDLVLIMSVNP--GFGGQSFIESQVKKISDLRRMCLE 222 (281)
Q Consensus 146 ~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~-vD~IlvmsV~p--G~~GQ~f~~~~l~kI~~lr~l~~~ 222 (281)
.+. ++ +.++.+|+ ++++.-++...+.. .+..+... +|++++=+-.| |-+|+.|.-+.+..+ + .
T Consensus 84 G~e----~~-~~~~~l~~-~~~vika~~v~~~~-~l~~~~~~~~d~~LlD~~~~~~GGtG~~fdw~~l~~~---~--~-- 149 (205)
T 1nsj_A 84 GEE----PI-ELCRKIAE-RILVIKAVGVSNER-DMERALNYREFPILLDTKTPEYGGSGKTFDWSLILPY---R--D-- 149 (205)
T ss_dssp SCC----CH-HHHHHHHT-TSEEEEEEEESSHH-HHHHHGGGTTSCEEEEESCSSSSSCCSCCCGGGTGGG---G--G--
T ss_pred CCC----CH-HHHHHHhc-CCCEEEEEEcCCHH-HHHHHHHcCCCEEEECCCCCCCCCCCCccCHHHHHhh---h--c--
Confidence 863 23 34455542 56666566554322 23332222 89998865544 667888876554321 0 1
Q ss_pred cCCCCeEEEecCCChhcHHHHHH-cCCcEEEEcccccCC---CCHH
Q 023494 223 KGVNPWIEVDGGVGPKNAYKVIE-AGANALVAGSAVFGA---KDYA 264 (281)
Q Consensus 223 ~~~~~~I~VDGGI~~e~i~~~~~-aGAD~~VvGSaIf~a---~dp~ 264 (281)
...++.+.||+|++|+.++++ .++..+=+.|.+=.+ .|++
T Consensus 150 --~~~p~~LAGGL~peNV~~ai~~~~p~gVDvsSGvE~~pG~KD~~ 193 (205)
T 1nsj_A 150 --RFRYLVLSGGLNPENVRSAIDVVRPFAVDVSSGVEAFPGKKDHD 193 (205)
T ss_dssp --GSSCEEEESSCCTTTHHHHHHHHCCSEEEESGGGEEETTEECHH
T ss_pred --CCCcEEEECCCCHHHHHHHHHhcCCCEEEECCceecCCCCcCHH
Confidence 124688999999999988765 699999999998632 4665
No 117
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=98.10 E-value=0.00013 Score=63.28 Aligned_cols=168 Identities=16% Similarity=0.130 Sum_probs=106.5
Q ss_pred HHHHHHHHcCCCeEEEEeeeCccccc-c-cCCHHHHHHcCcC-CCCCeeEEEEecChhh-HHHHHHHcCCCEEEEccccc
Q 023494 74 EQVKAVELAGCDWIHVDVMDGRFVPN-I-TIGPLVVDALRPV-TDLPLDVHLMIVEPEQ-RVPDFIKAGADIVSVHCEQS 149 (281)
Q Consensus 74 ~~l~~l~~~G~d~iHiDImDG~fvpn-~-~~G~~~I~~ir~~-t~~~idaHLmv~dp~~-~i~~~~~aGAd~Itvh~Ea~ 149 (281)
+.++.+.++|+|++=+- |.|. - ...++..++|.+. ++...-|=+.++.+.. ..+.+.+.+.|.|-+|.+.
T Consensus 12 eda~~a~~~GaD~iGfi-----f~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLHG~e- 85 (203)
T 1v5x_A 12 EDALLAEALGAFALGFV-----LAPGSRRRIAPEAARAIGEALGPFVVRVGVFRDQPPEEVLRLMEEARLQVAQLHGEE- 85 (203)
T ss_dssp HHHHHHHHHTCSEEEEE-----CCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSCCHHHHHHHHHHTTCSEEEECSCC-
T ss_pred HHHHHHHHcCCCEEEEE-----ecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEECCCC-
Confidence 45677778899997442 2232 1 3366777777543 3334445557765444 4556678899999999863
Q ss_pred ccccHHHHHHHHHHcCCcEEEEECCCCCHH-HHHHhhccCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCe
Q 023494 150 STIHLHRTLNQIKDLGAKAGVVLNPATSLS-AIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPW 228 (281)
Q Consensus 150 ~~~~i~~~l~~ik~~G~k~Glai~p~t~ie-~~~~~l~~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~ 228 (281)
++ +.++.++ .|+++.-++......+ .+..+. +|++++=+ ..|-+|+.|.-+.+..+ . .. +.+
T Consensus 86 ---~~-~~~~~l~-~~~~vika~~v~~~~~l~~~~~~--~d~~LlD~-~~gGtG~~fdW~~l~~~--~----~~---~~p 148 (203)
T 1v5x_A 86 ---PP-EWAEAVG-RFYPVIKAFPLEGPARPEWADYP--AQALLLDG-KRPGSGEAYPRAWAKPL--L----AT---GRR 148 (203)
T ss_dssp ---CH-HHHHHHT-TTSCEEEEEECSSSCCGGGGGSS--CSEEEEEC-SSTTSCCCCCGGGGHHH--H----HT---TSC
T ss_pred ---CH-HHHHHhc-cCCCEEEEEEcCChHhhhhhhcC--CCEEEEcC-CCCCCCCccCHHHHHhh--h----cc---CCc
Confidence 23 3444443 2677776666544322 222222 89998743 23667888876655432 1 11 246
Q ss_pred EEEecCCChhcHHHHHHcCCcEEEEcccccCC---CCHH
Q 023494 229 IEVDGGVGPKNAYKVIEAGANALVAGSAVFGA---KDYA 264 (281)
Q Consensus 229 I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a---~dp~ 264 (281)
+.+.||+|++|+.+++..++..+=+.|.+=.+ .|++
T Consensus 149 ~~LAGGL~peNV~~ai~~~p~gVDvsSGvE~~pG~KD~~ 187 (203)
T 1v5x_A 149 VILAGGIAPENLEEVLALRPYALDLASGVEEAPGVKSAE 187 (203)
T ss_dssp EEECSSCCSTTHHHHHHHCCSEEEESGGGEEETTEECHH
T ss_pred EEEECCCCHHHHHHHHhcCCCEEEeCCceecCCCCcCHH
Confidence 88999999999988777799999999998632 4665
No 118
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=98.10 E-value=3.1e-05 Score=70.98 Aligned_cols=173 Identities=12% Similarity=0.156 Sum_probs=109.6
Q ss_pred cCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHc-CcCCCCCeeEEEEecCh-----h-----hHHHHHHHcC
Q 023494 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDAL-RPVTDLPLDVHLMIVEP-----E-----QRVPDFIKAG 138 (281)
Q Consensus 70 ~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~i-r~~t~~~idaHLmv~dp-----~-----~~i~~~~~aG 138 (281)
.++.+.+..+. .|+|-+-+ ..| +++.. +...+.++.+||=-.++ . .-++.+.+.|
T Consensus 73 ~~~~~~i~~l~-~g~dav~~-----------~~G--~~~~~~~~~~~~~lil~l~~~t~~~~~~~~~~l~~~ve~Av~~G 138 (295)
T 3glc_A 73 ERIDINIAPLF-EHADVLMC-----------TRG--ILRSVVPPATNRPVVLRASGANSILAELSNEAVALSMDDAVRLN 138 (295)
T ss_dssp TTHHHHTGGGG-GGCSEEEE-----------CHH--HHHHHSCGGGCCCEEEECEECCCTTSCTTCCEECSCHHHHHHTT
T ss_pred hhhHHHHHHhh-cCCCEEEE-----------CHh--HHhhhccccCCccEEEEEcCCCcCCCCCccchhHHHHHHHHHCC
Confidence 35655555543 35766532 122 33333 33346788888865442 1 1378889999
Q ss_pred CCEEEEcccccc------cccHHHHHHHHHHcCCcEEEEECC----CCCHHHHH---Hhhc--cCCEEEEEeecCCCCCC
Q 023494 139 ADIVSVHCEQSS------TIHLHRTLNQIKDLGAKAGVVLNP----ATSLSAIE---CVLD--VVDLVLIMSVNPGFGGQ 203 (281)
Q Consensus 139 Ad~Itvh~Ea~~------~~~i~~~l~~ik~~G~k~Glai~p----~t~ie~~~---~~l~--~vD~IlvmsV~pG~~GQ 203 (281)
||.|.+|.--.+ .+++.++.+.++++|+.+.+...+ .++.+.+. .+.. .+|+|=.- .| +
T Consensus 139 AdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~--~t---~- 212 (295)
T 3glc_A 139 SCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTY--YV---E- 212 (295)
T ss_dssp CSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTTCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEE--CC---T-
T ss_pred CCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeC--CC---H-
Confidence 999999955221 223557788888899887664322 13333222 2222 37987542 22 2
Q ss_pred ccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChh------cHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhc
Q 023494 204 SFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPK------NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSK 274 (281)
Q Consensus 204 ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e------~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~ 274 (281)
+.+ +++.+. ..+++.+-||++.+ .+..++++||+.+++||+||+++||.+.++.+++.+
T Consensus 213 ----e~~---~~vv~~-----~~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~dp~~~~~al~~iv 277 (295)
T 3glc_A 213 ----KGF---ERIVAG-----CPVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQSDHPVAMMKAVQAVV 277 (295)
T ss_dssp ----TTH---HHHHHT-----CSSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHH
T ss_pred ----HHH---HHHHHh-----CCCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcCcCHHHHHHHHHHHH
Confidence 223 333332 23688899999853 688889999999999999999999999999988754
No 119
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=98.09 E-value=1.2e-05 Score=72.95 Aligned_cols=93 Identities=13% Similarity=0.148 Sum_probs=66.4
Q ss_pred HHHHHHHHHHcC---CcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeE
Q 023494 154 LHRTLNQIKDLG---AKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWI 229 (281)
Q Consensus 154 i~~~l~~ik~~G---~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I 229 (281)
+.+.++.+|+.. .++++... |. +++.+.++ .+|+|.+.+ |.++ .++++++.++....+++|
T Consensus 168 ~~~ai~~~r~~~~~~~~i~vev~--tl-ee~~~A~~aGaD~I~ld~---------~~~~---~l~~~v~~l~~~~~~~~i 232 (273)
T 2b7n_A 168 LKSFLTHARKNLPFTAKIEIECE--SF-EEAKNAMNAGADIVMCDN---------LSVL---ETKEIAAYRDAHYPFVLL 232 (273)
T ss_dssp HHHHHHHHGGGSCTTCCEEEEES--SH-HHHHHHHHHTCSEEEEET---------CCHH---HHHHHHHHHHHHCTTCEE
T ss_pred HHHHHHHHHHhCCCCceEEEEcC--CH-HHHHHHHHcCCCEEEECC---------CCHH---HHHHHHHHhhccCCCcEE
Confidence 567788888764 47788664 33 44444333 599998743 2344 444444555443345799
Q ss_pred EEecCCChhcHHHHHHcCCcEEEEcccccCCC
Q 023494 230 EVDGGVGPKNAYKVIEAGANALVAGSAVFGAK 261 (281)
Q Consensus 230 ~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a~ 261 (281)
++.|||+++|+.++.++|||.+.+||.+++++
T Consensus 233 ~AsGGI~~~ni~~~~~aGaD~i~vGs~i~~a~ 264 (273)
T 2b7n_A 233 EASGNISLESINAYAKSGVDAISVGALIHQAT 264 (273)
T ss_dssp EEESSCCTTTHHHHHTTTCSEEECTHHHHTCC
T ss_pred EEECCCCHHHHHHHHHcCCcEEEEcHHhcCCC
Confidence 99999999999999999999999999998653
No 120
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.08 E-value=0.0001 Score=72.31 Aligned_cols=184 Identities=16% Similarity=0.197 Sum_probs=111.1
Q ss_pred cCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCc-C------CCCCeeEEEEec-ChhhHHHHHHHcCCCE
Q 023494 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRP-V------TDLPLDVHLMIV-EPEQRVPDFIKAGADI 141 (281)
Q Consensus 70 ~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~-~------t~~~idaHLmv~-dp~~~i~~~~~aGAd~ 141 (281)
..+.+.++.+.+.++..+.|==-+|.++=.++. .++++.+.. . ....+-+-.-+. +..+.++.+.++|+|.
T Consensus 193 ~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~-~Dil~~~~~p~a~~D~~~rl~V~aavg~~~d~~era~aLveaGvd~ 271 (511)
T 3usb_A 193 TTLSEAEKILQKYKIEKLPLVDNNGVLQGLITI-KDIEKVIEFPNSAKDKQGRLLVGAAVGVTADAMTRIDALVKASVDA 271 (511)
T ss_dssp CCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEH-HHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSE
T ss_pred CCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccH-HHHHHhhhcccchhhhccceeeeeeeeeccchHHHHHHHHhhccce
Confidence 478999999999999987652122443322222 244444422 0 112222222222 3234567789999999
Q ss_pred EEEcccccccccHHHHHHHHHHc--CCcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCC-C----CccchhHHHHH
Q 023494 142 VSVHCEQSSTIHLHRTLNQIKDL--GAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFG-G----QSFIESQVKKI 213 (281)
Q Consensus 142 Itvh~Ea~~~~~i~~~l~~ik~~--G~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~-G----Q~f~~~~l~kI 213 (281)
+.+...........+.++++++. +..+.+ -+- ...+..+.+.+ .+|.|.+ +..||.- . ..+-...+.-+
T Consensus 272 I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~-g~v-~t~e~a~~~~~aGad~i~v-g~g~gsi~~~~~~~g~g~p~~~~l 348 (511)
T 3usb_A 272 IVLDTAHGHSQGVIDKVKEVRAKYPSLNIIA-GNV-ATAEATKALIEAGANVVKV-GIGPGSICTTRVVAGVGVPQLTAV 348 (511)
T ss_dssp EEEECSCTTSHHHHHHHHHHHHHCTTSEEEE-EEE-CSHHHHHHHHHHTCSEEEE-CSSCSTTCCHHHHHCCCCCHHHHH
T ss_pred EEecccccchhhhhhHHHHHHHhCCCceEEe-eee-ccHHHHHHHHHhCCCEEEE-CCCCccccccccccCCCCCcHHHH
Confidence 99965532123456778888876 344443 121 24555666555 4899986 4445430 0 01212234556
Q ss_pred HHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccC
Q 023494 214 SDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFG 259 (281)
Q Consensus 214 ~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~ 259 (281)
.++++..++ .+++|.+||||. .+.+.+++++|||.+.+||++..
T Consensus 349 ~~v~~~~~~--~~iPVIa~GGI~~~~di~kala~GA~~V~vGs~~~~ 393 (511)
T 3usb_A 349 YDCATEARK--HGIPVIADGGIKYSGDMVKALAAGAHVVMLGSMFAG 393 (511)
T ss_dssp HHHHHHHHT--TTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTT
T ss_pred HHHHHHHHh--CCCcEEEeCCCCCHHHHHHHHHhCchhheecHHHhc
Confidence 666665543 357899999996 88999999999999999999864
No 121
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=98.08 E-value=4.1e-05 Score=71.89 Aligned_cols=196 Identities=16% Similarity=0.244 Sum_probs=131.0
Q ss_pred eEEEeccCcc-CHHHHHHHHHHcCCCeEEEEee-----eCccccc-----------cc---CCHHH-HHHc---CcCCCC
Q 023494 61 SPSILSANFA-KLGEQVKAVELAGCDWIHVDVM-----DGRFVPN-----------IT---IGPLV-VDAL---RPVTDL 116 (281)
Q Consensus 61 ~pSila~D~~-~l~~~l~~l~~~G~d~iHiDIm-----DG~fvpn-----------~~---~G~~~-I~~i---r~~t~~ 116 (281)
.|-++++=+. +-.+.++.+...|...+.+-=. .|+=-|. +. .|.+. ++.+ ++..+.
T Consensus 48 NPv~lAAG~~~~~~e~~~~l~~~G~G~v~~ktvt~~pq~GNp~PR~~~~~~~~iN~~G~~n~G~~~~~~~l~~~~~~~~~ 127 (354)
T 4ef8_A 48 NPFMNAAGVMCTTTEELVAMTESASGSLVSKSCTPALREGNPTPRYQALPLGSINSMGLPNNGFDFYLAYAAEQHDYGKK 127 (354)
T ss_dssp SSEEECTTSSCSSHHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETTEEEECCCCCBCCHHHHHHHHHHTCCTTTC
T ss_pred CCCEeccCCCCCCHHHHHHHHHcCCCeEEeCcccCcccCCCCCCcEEecchhhhccCCCCCcCHHHHHHHHHHHhhcCCC
Confidence 4666666555 4457788888888888776411 2221121 11 24443 3344 334568
Q ss_pred CeeEEEEecChhhHHHH---HH---HcCCCEEEEccccc----------ccccHHHHHHHHHHc-CCcEEEEECCCCCHH
Q 023494 117 PLDVHLMIVEPEQRVPD---FI---KAGADIVSVHCEQS----------STIHLHRTLNQIKDL-GAKAGVVLNPATSLS 179 (281)
Q Consensus 117 ~idaHLmv~dp~~~i~~---~~---~aGAd~Itvh~Ea~----------~~~~i~~~l~~ik~~-G~k~Glai~p~t~ie 179 (281)
|+.+-+.-.+|+.|.+. +. +.|+|+|.+..-+. ..+.+.++++++++. .+-+.+=+.|+.+.+
T Consensus 128 pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~~~PV~vKi~p~~d~~ 207 (354)
T 4ef8_A 128 PLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSFGVKMPPYFDFA 207 (354)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHCCSCEEEEECCCCSHH
T ss_pred cEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhhCCCeEEEecCCCCHH
Confidence 99999988999987553 33 46899999886431 123466788888875 677888899988776
Q ss_pred HHHHhhc------cCCEEEE-------Eeec--C------------CCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEe
Q 023494 180 AIECVLD------VVDLVLI-------MSVN--P------------GFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVD 232 (281)
Q Consensus 180 ~~~~~l~------~vD~Ilv-------msV~--p------------G~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VD 232 (281)
.+.++.+ .+|.|.+ |.++ . |.+|....|..++.|+++++.. .+++|...
T Consensus 208 ~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~----~~ipII~~ 283 (354)
T 4ef8_A 208 HFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRC----PGKLIFGC 283 (354)
T ss_dssp HHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHC----TTSEEEEE
T ss_pred HHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhC----CCCCEEEE
Confidence 6655543 2777754 1222 1 1234444567788888877652 24899999
Q ss_pred cCCC-hhcHHHHHHcCCcEEEEcccccCC
Q 023494 233 GGVG-PKNAYKVIEAGANALVAGSAVFGA 260 (281)
Q Consensus 233 GGI~-~e~i~~~~~aGAD~~VvGSaIf~a 260 (281)
|||. .+.+.+++.+|||.+-+||+++..
T Consensus 284 GGI~s~~da~~~l~aGAd~V~vgra~l~~ 312 (354)
T 4ef8_A 284 GGVYTGEDAFLHVLAGASMVQVGTALQEE 312 (354)
T ss_dssp SCCCSHHHHHHHHHHTEEEEEECHHHHHH
T ss_pred CCcCCHHHHHHHHHcCCCEEEEhHHHHHh
Confidence 9998 889999999999999999998753
No 122
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=98.05 E-value=3.1e-05 Score=72.36 Aligned_cols=142 Identities=11% Similarity=0.174 Sum_probs=92.7
Q ss_pred CCCCeeEEEEecChhhHHH---HHHHcCCCEEEEccccc---------------ccccHHHHHHHHHHc-CCcEEEEECC
Q 023494 114 TDLPLDVHLMIVEPEQRVP---DFIKAGADIVSVHCEQS---------------STIHLHRTLNQIKDL-GAKAGVVLNP 174 (281)
Q Consensus 114 t~~~idaHLmv~dp~~~i~---~~~~aGAd~Itvh~Ea~---------------~~~~i~~~l~~ik~~-G~k~Glai~p 174 (281)
.+.++.+.|...+|..|.+ .+.++|+|.|-+|.-+. ..+.+.++++.+++. ++.+.+-+.+
T Consensus 56 ~~~p~~vQL~g~~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~ 135 (350)
T 3b0p_A 56 EEHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRL 135 (350)
T ss_dssp GGCSEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEES
T ss_pred CCCeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEec
Confidence 4689999999999987754 45678999999996431 012355677888774 7777775544
Q ss_pred CC----C----HHHHHHhhc-cCCEEEEEeecC--CCCCCc---cchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhc
Q 023494 175 AT----S----LSAIECVLD-VVDLVLIMSVNP--GFGGQS---FIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKN 239 (281)
Q Consensus 175 ~t----~----ie~~~~~l~-~vD~IlvmsV~p--G~~GQ~---f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~ 239 (281)
+. . .+..+.+.+ .+|+|.+.+... |+.|.. ..+..++.++++++..+ +++|.+.|||+ .+.
T Consensus 136 g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~----~iPVianGgI~s~ed 211 (350)
T 3b0p_A 136 GLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFP----QLTFVTNGGIRSLEE 211 (350)
T ss_dssp CBTTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCT----TSEEEEESSCCSHHH
T ss_pred CcCccccHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCC----CCeEEEECCcCCHHH
Confidence 32 1 122233322 389998754332 333321 11234666777776542 47899999995 899
Q ss_pred HHHHHHcCCcEEEEcccccCC
Q 023494 240 AYKVIEAGANALVAGSAVFGA 260 (281)
Q Consensus 240 i~~~~~aGAD~~VvGSaIf~a 260 (281)
+.++++ |||.+.+||+++..
T Consensus 212 a~~~l~-GaD~V~iGRa~l~~ 231 (350)
T 3b0p_A 212 ALFHLK-RVDGVMLGRAVYED 231 (350)
T ss_dssp HHHHHT-TSSEEEECHHHHHC
T ss_pred HHHHHh-CCCEEEECHHHHhC
Confidence 999998 99999999987643
No 123
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=98.05 E-value=5.5e-05 Score=64.43 Aligned_cols=185 Identities=20% Similarity=0.195 Sum_probs=105.7
Q ss_pred CHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcC-CCCCeeEEEEecChhhHHHHHHHcCCCEEEEccccc
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQS 149 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~-t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~ 149 (281)
+..+.++.+.+.+.|.+=+|+.= |. .-|.++++.||+. +..++-+-+...+ ......+.++|++.+..-....
T Consensus 13 ~~~~a~~~~~~~~~dlvl~D~~~----p~-~~g~~~~~~l~~~~~~~~i~vi~~~~~-~~~~~~~~~~Ga~~~l~kp~~~ 86 (237)
T 3cwo_X 13 NGREAVEKYKELKPDIVTMDITM----PE-MNGIDAIKEIMKIDPNAKIIVCSAMGQ-QAMVIEAIKAGAKDFIVNTAAV 86 (237)
T ss_dssp SSSTTHHHHHHHCCSCEEEECCS----TT-SSHHHHHHHHHHHSSSCCEEEECCSST-HHHHHHHHHTTCCEEEESHHHH
T ss_pred CHHHHHHHHHhcCCCEEEEeCCC----CC-CCHHHHHHHHHHhCCCCCEEEEECCCC-HHHHHHHHHCCHHheEeCCccc
Confidence 34455666666678876566432 32 2267888888764 3333333222233 4467788899999887664100
Q ss_pred ccccHHHHHHHHHHcCCc-EEEEECC-------------------CCCHHHHHHhhcc-CCEEEEEee-cCCCCCCccch
Q 023494 150 STIHLHRTLNQIKDLGAK-AGVVLNP-------------------ATSLSAIECVLDV-VDLVLIMSV-NPGFGGQSFIE 207 (281)
Q Consensus 150 ~~~~i~~~l~~ik~~G~k-~Glai~p-------------------~t~ie~~~~~l~~-vD~IlvmsV-~pG~~GQ~f~~ 207 (281)
....+...+.. ..+.+ ..+.+.. .+..+.++.+... +..|+++++ ..|. +..+.
T Consensus 87 ~~~~l~~~i~~--~~~~~~~~~~~d~~~~~~~~~v~~~~g~~~~~~~~~~~i~~~~~~~~~~vli~~~~~~g~-~~g~~- 162 (237)
T 3cwo_X 87 ENPSLITQIAQ--TFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGT-KSGYD- 162 (237)
T ss_dssp HCTHHHHHHHH--HHTGGGEEEEEEEEESSSCEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTTTTC-CSCCC-
T ss_pred ChHHHHHHHHH--HhCCCceEEEeeecccCCcEEEEEeCCccccccCHHHHHHHHhhcCCCeEEEEecCCCCc-ccccc-
Confidence 01222222222 22322 2222211 1233444544432 566777765 3343 22232
Q ss_pred hHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEccccc-CCCCHHHHHHHHHH
Q 023494 208 SQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVF-GAKDYAEAIKGIKT 272 (281)
Q Consensus 208 ~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf-~a~dp~~~~~~l~~ 272 (281)
.+.|+++++. .+.++.+-||++ ++++.++.++|+|.+++||+++ +..++.+..+.+++
T Consensus 163 --~~~i~~~~~~-----~~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~a~~~~~~~~~~~~~~l~~ 222 (237)
T 3cwo_X 163 --TEMIRFVRPL-----TTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFREIDVRELKEYLKK 222 (237)
T ss_dssp --HHHHHHHGGG-----CCSCEEEESCCCSHHHHHHHHHHTCSEEEESHHHHTTSSCHHHHHHHHHT
T ss_pred --HHHHHHHHHh-----cCCCEEecCCCCCHHHHHHHHHcCcHHHhhhHHHHcCCCCHHHHHHHHHH
Confidence 4445554433 246777888887 8999999999999999999995 55688877776664
No 124
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=98.04 E-value=9.1e-05 Score=70.60 Aligned_cols=127 Identities=20% Similarity=0.318 Sum_probs=84.2
Q ss_pred hhHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHc-CCcEEE-EECCCCCHHHHHHhhc-cCCEEEEEeecCCCC--C
Q 023494 128 EQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL-GAKAGV-VLNPATSLSAIECVLD-VVDLVLIMSVNPGFG--G 202 (281)
Q Consensus 128 ~~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~-G~k~Gl-ai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~--G 202 (281)
.++++.+.++|+|.|.+-..........+.++.+|+. ++.+.+ .+ +..+..+.+.+ .+|+|.+ +..||-- .
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~~i~Vi~g~V---~t~e~A~~a~~aGAD~I~v-G~g~Gs~~~t 221 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNV---VTEEATKELIENGADGIKV-GIGPGSICTT 221 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTCCCEEEEEEE---CSHHHHHHHHHTTCSEEEE-CC--------
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcCCCeEEEeec---CCHHHHHHHHHcCCCEEEE-eCCCCcCccc
Confidence 5678999999999998733221123456778888875 777665 23 34666666655 4999987 4445421 1
Q ss_pred C---ccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCC
Q 023494 203 Q---SFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGA 260 (281)
Q Consensus 203 Q---~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a 260 (281)
. .+-...+.-|.++++...+ .+++|..+|||. .+++..++++|||.+.+||++...
T Consensus 222 r~~~g~g~p~~~al~~v~~~~~~--~~IPVIA~GGI~~~~di~kalalGAd~V~vGt~f~~t 281 (400)
T 3ffs_A 222 RIVAGVGVPQITAIEKCSSVASK--FGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGT 281 (400)
T ss_dssp -CCSCBCCCHHHHHHHHHHHHTT--TTCCEEEESCCCSHHHHHHHHTTTCSEEEECGGGTTB
T ss_pred ccccccchhHHHHHHHHHHHHHh--cCCCEEecCCCCCHHHHHHHHHcCCCEEEEChHHhcC
Confidence 1 0111234556666655432 358899999996 899999999999999999998864
No 125
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=98.03 E-value=8.3e-05 Score=69.09 Aligned_cols=142 Identities=15% Similarity=0.068 Sum_probs=93.7
Q ss_pred CCCCeeEEEEe-cChhhHHHHHHHcCCCEEEEcccccc-------c---ccHHHHHHHHHHc-CCcEEEEE-CCCCCHHH
Q 023494 114 TDLPLDVHLMI-VEPEQRVPDFIKAGADIVSVHCEQSS-------T---IHLHRTLNQIKDL-GAKAGVVL-NPATSLSA 180 (281)
Q Consensus 114 t~~~idaHLmv-~dp~~~i~~~~~aGAd~Itvh~Ea~~-------~---~~i~~~l~~ik~~-G~k~Glai-~p~t~ie~ 180 (281)
++.|+-+.+.. .++..+.+.+.++|+|.+.+|..... . ....+.++++++. ++.+.+-+ .+....+.
T Consensus 115 ~~~pv~~~i~~~~~~~~~~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~~~~ 194 (349)
T 1p0k_A 115 PNGLIFANLGSEATAAQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVKEVGFGMSKAS 194 (349)
T ss_dssp SSSCEEEEEETTCCHHHHHHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHCSSCEEEEEESSCCCHHH
T ss_pred CCceeEEeecCCCCHHHHHHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHcCCCEEEEecCCCCCHHH
Confidence 56788888773 56665555566789999999976310 0 1255778888864 66677654 44455666
Q ss_pred HHHhhc-cCCEEEEEeecCCC--------CC-------CccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHH
Q 023494 181 IECVLD-VVDLVLIMSVNPGF--------GG-------QSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKV 243 (281)
Q Consensus 181 ~~~~l~-~vD~IlvmsV~pG~--------~G-------Q~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~ 243 (281)
.+...+ .+|.|.+- .+.|. .. ...-+.+.+.|+++++.. .+++|.++|||. .+++.++
T Consensus 195 a~~a~~~Gad~I~v~-~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~----~~ipvia~GGI~~~~d~~k~ 269 (349)
T 1p0k_A 195 AGKLYEAGAAAVDIG-GYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEF----PASTMIASGGLQDALDVAKA 269 (349)
T ss_dssp HHHHHHHTCSEEEEE-C---------------CCGGGGTTCSCCHHHHHHHHHHHC----TTSEEEEESSCCSHHHHHHH
T ss_pred HHHHHHcCCCEEEEc-CCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhc----CCCeEEEECCCCCHHHHHHH
Confidence 666554 48999873 22221 10 012233455666666543 247899999998 8899999
Q ss_pred HHcCCcEEEEcccccCC
Q 023494 244 IEAGANALVAGSAVFGA 260 (281)
Q Consensus 244 ~~aGAD~~VvGSaIf~a 260 (281)
+.+|||.+.+||+++..
T Consensus 270 l~~GAd~V~iG~~~l~~ 286 (349)
T 1p0k_A 270 IALGASCTGMAGHFLKA 286 (349)
T ss_dssp HHTTCSEEEECHHHHHH
T ss_pred HHcCCCEEEEcHHHHHH
Confidence 99999999999998753
No 126
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=98.02 E-value=4.5e-05 Score=72.39 Aligned_cols=135 Identities=22% Similarity=0.349 Sum_probs=89.0
Q ss_pred CeeEEEEecC-hhhHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHc--CCcEEE-EECCCCCHHHHHHhhc-cCCEE
Q 023494 117 PLDVHLMIVE-PEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL--GAKAGV-VLNPATSLSAIECVLD-VVDLV 191 (281)
Q Consensus 117 ~idaHLmv~d-p~~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~--G~k~Gl-ai~p~t~ie~~~~~l~-~vD~I 191 (281)
++.+-+...+ -.+.++.+.++|+|.|.++.-........+.++++|+. ++.+.+ .+ +..+..+.+.+ .+|+|
T Consensus 143 ~~~~~i~~~~~~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~~v---~~~~~a~~a~~~Gad~I 219 (404)
T 1eep_A 143 RVGAAVSIDIDTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAGNI---VTKEAALDLISVGADCL 219 (404)
T ss_dssp CCEEEECSCTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEEEE---CSHHHHHHHHTTTCSEE
T ss_pred eEEEEeCCChhHHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEcCC---CcHHHHHHHHhcCCCEE
Confidence 3455554421 12346677889999999864322123466788888887 777765 22 24566666555 39999
Q ss_pred EEEeecCCC-------CCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccC
Q 023494 192 LIMSVNPGF-------GGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFG 259 (281)
Q Consensus 192 lvmsV~pG~-------~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~ 259 (281)
.+ +..+|. ++. -.| .++-+.++++..+. .+++|..+|||+ .+++.+++.+|||.+.+||++..
T Consensus 220 ~v-g~~~G~~~~~~~~~~~-g~p-~~~~l~~v~~~~~~--~~ipVia~GGI~~~~d~~~ala~GAd~V~iG~~~l~ 290 (404)
T 1eep_A 220 KV-GIGPGSICTTRIVAGV-GVP-QITAICDVYEACNN--TNICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAG 290 (404)
T ss_dssp EE-CSSCSTTSHHHHHHCC-CCC-HHHHHHHHHHHHTT--SSCEEEEESCCCSHHHHHHHHHHTCSEEEECHHHHT
T ss_pred EE-CCCCCcCcCccccCCC-Ccc-hHHHHHHHHHHHhh--cCceEEEECCCCCHHHHHHHHHcCCCHHhhCHHHhc
Confidence 88 666653 111 011 24445566655432 358999999998 89999999999999999999854
No 127
>3n3m_A Orotidine 5'-phosphate decarboxylase; P. falciparum, 5'-monophosphate decarboxylase, 6- UMP, lyase; HET: PGE NUP; 1.47A {Plasmodium falciparum} SCOP: c.1.2.3 PDB: 2qaf_A* 3bar_A* 2q8z_A* 3mwa_A* 3n2m_A* 3bpw_A* 3n34_A* 3s9y_A* 2f84_A 2q8l_A 2za1_A* 2za2_A 2za3_A* 2zcg_A 3vi2_A*
Probab=97.96 E-value=4.5e-06 Score=77.92 Aligned_cols=179 Identities=17% Similarity=0.110 Sum_probs=98.1
Q ss_pred CCeEEEEeeeCcccccc-cCCHHHHHHcCcC------CCCCeeEEEEecChhh----HHHHH-HHcCCCEEEEccccccc
Q 023494 84 CDWIHVDVMDGRFVPNI-TIGPLVVDALRPV------TDLPLDVHLMIVEPEQ----RVPDF-IKAGADIVSVHCEQSST 151 (281)
Q Consensus 84 ~d~iHiDImDG~fvpn~-~~G~~~I~~ir~~------t~~~idaHLmv~dp~~----~i~~~-~~aGAd~Itvh~Ea~~~ 151 (281)
+.++-+ | .+.+ .+|++.++.+++. .++++.+|+|..|... |.+.+ .+.|+|.+|+|.-.. .
T Consensus 117 v~~vKv----G--~~lf~~~G~~gv~~l~~l~~~l~~~g~~VflDlK~~DIpnTv~~ya~~~~~~lgaD~vTVh~~~G-~ 189 (342)
T 3n3m_A 117 ALTFKM----N--FAFYIPYGSVGIDVLKNVFDYLYELNIPTILDMKINDIGNTVKNYRKFIFEYLKSDSCTVNIYMG-T 189 (342)
T ss_dssp CSEEEE----E--GGGTSTTTHHHHHHHHHHHHHHHHHTCCEEEEEEECCCHHHHHHHHHHHHTTSCCSEEEECCTTC-S
T ss_pred CcEEEe----c--HHHHHhcCHHHHHHHHHHHHHHHhCCCeEEEEeecCCcHHHHHHHHHHHHHhcCCCEEEEcccCC-H
Confidence 666655 3 2333 7898776333321 4789999999999874 44443 346999999998753 3
Q ss_pred ccHHHHH-HHHHHcCCcEEE-EECCCCCHHHHHHhhc-c--------CCEEEEEe------ecCCCCCCccchh-HHHHH
Q 023494 152 IHLHRTL-NQIKDLGAKAGV-VLNPATSLSAIECVLD-V--------VDLVLIMS------VNPGFGGQSFIES-QVKKI 213 (281)
Q Consensus 152 ~~i~~~l-~~ik~~G~k~Gl-ai~p~t~ie~~~~~l~-~--------vD~Ilvms------V~pG~~GQ~f~~~-~l~kI 213 (281)
+.+..++ +..++.+..+-+ +.-.+..-+.++.... . ++.+.-+. ...|..|--- +. ..+.+
T Consensus 190 ~~l~~a~~~~~~~~~~~v~vvt~tSs~~~~dlq~~~~~~~~~ly~~V~~~a~~~a~~~~~a~~~G~~GvV~-GATsp~e~ 268 (342)
T 3n3m_A 190 NMLKDICYDEEKNKYYSAFVLVKTTNPDSAIFQKNLSLDNKQAYVIMAQEALNMSSYLNLEQNNEFIGFVV-GANSYDEM 268 (342)
T ss_dssp GGGGGTSEETTTTEECEEEEEEECCSTTTHHHHTTCEETTEEHHHHHHHHHHHHHHHTTTGGGTCCEEEEE-CTTCHHHH
T ss_pred HHHHHHHHHHHhhcCCcEEEEEeCCCCCHHHHHHHhccCCChHHHHHHHHHHHHHHhcccccccCCceEEE-CCCCHHHH
Confidence 4444432 333444444433 2222222222222100 0 00010000 0122222000 11 12345
Q ss_pred HHHHHHhhhcCCCCeEEEecCCChh--cHHHHH------HcCCcEEEEcccccCCCCHHHHHHHHHHhcC
Q 023494 214 SDLRRMCLEKGVNPWIEVDGGVGPK--NAYKVI------EAGANALVAGSAVFGAKDYAEAIKGIKTSKR 275 (281)
Q Consensus 214 ~~lr~l~~~~~~~~~I~VDGGI~~e--~i~~~~------~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~~ 275 (281)
+.+|+.++ ++.+ +-.||..+ +.+.++ +.|+|.+|+||.|+.++||.++++++++.++
T Consensus 269 ~~iR~~~p----~~~i-LtPGIGAQggDq~rv~tp~~a~~~g~~~ivVGR~I~~A~dP~~Aa~~i~~ei~ 333 (342)
T 3n3m_A 269 NYIRTYFP----NCYI-LSPGIGAQNGDLHKTLTNGYHKSYEKILINIGRAITKNPYPQKAAQMYYDQIN 333 (342)
T ss_dssp HHHHHHST----TCCE-EECCSSTTCCCHHHHHHHHCCSSGGGEEEEECHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHhCC----CCeE-EeCCCCcCCCCHHHHHhhhhhhhcCceEEEcChhhhcCCCHHHHHHHHHHHHH
Confidence 56666553 3444 67888744 555542 2588999999999999999999999988654
No 128
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=97.96 E-value=2.1e-05 Score=72.25 Aligned_cols=93 Identities=14% Similarity=0.146 Sum_probs=65.2
Q ss_pred HHHHHHHHHHcC---CcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeE
Q 023494 154 LHRTLNQIKDLG---AKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWI 229 (281)
Q Consensus 154 i~~~l~~ik~~G---~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I 229 (281)
+.+.++.+|+.. .++++... |. +++.+.++ .+|+|.+.+ |.++ .++++++.++....+++|
T Consensus 183 ~~~ai~~~r~~~~~~~~i~vev~--tl-ee~~~A~~aGaD~I~ld~---------~~~~---~l~~~v~~l~~~~~~~~I 247 (299)
T 2jbm_A 183 VEKAVRAARQAADFALKVEVECS--SL-QEAVQAAEAGADLVLLDN---------FKPE---ELHPTATVLKAQFPSVAV 247 (299)
T ss_dssp HHHHHHHHHHHHTTTSCEEEEES--SH-HHHHHHHHTTCSEEEEES---------CCHH---HHHHHHHHHHHHCTTSEE
T ss_pred HHHHHHHHHHhCCcCCeEEEecC--CH-HHHHHHHHcCCCEEEECC---------CCHH---HHHHHHHHhhccCCCeeE
Confidence 345667777643 57888664 33 44544443 599998743 2243 444445555443445899
Q ss_pred EEecCCChhcHHHHHHcCCcEEEEcccccCCC
Q 023494 230 EVDGGVGPKNAYKVIEAGANALVAGSAVFGAK 261 (281)
Q Consensus 230 ~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a~ 261 (281)
++.||||++|+.++.++|||.+.+||.+++++
T Consensus 248 ~ASGGIt~~ni~~~~~aGaD~i~vGs~i~~a~ 279 (299)
T 2jbm_A 248 EASGGITLDNLPQFCGPHIDVISMGMLTQAAP 279 (299)
T ss_dssp EEESSCCTTTHHHHCCTTCCEEECTHHHHSCC
T ss_pred EEECCCCHHHHHHHHHCCCCEEEEChhhcCCC
Confidence 99999999999999999999999999988753
No 129
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=97.93 E-value=4.7e-05 Score=71.20 Aligned_cols=198 Identities=15% Similarity=0.173 Sum_probs=126.2
Q ss_pred eEEEeccCcc-CHHHHHHHHHHcCCCeEEEEee-----eCcccc-----------ccc---CCHHH-HHHcCc----CCC
Q 023494 61 SPSILSANFA-KLGEQVKAVELAGCDWIHVDVM-----DGRFVP-----------NIT---IGPLV-VDALRP----VTD 115 (281)
Q Consensus 61 ~pSila~D~~-~l~~~l~~l~~~G~d~iHiDIm-----DG~fvp-----------n~~---~G~~~-I~~ir~----~t~ 115 (281)
.|-++++=+. +-.+.++.+...|...+.+-=. .|+-.| .+. .|.+. ++.+++ ..+
T Consensus 49 NPv~lAaG~~~~~~e~~~~~~~~G~G~v~~ktvt~~pq~gnp~PR~~~~~~~~iN~~G~~n~G~~~~~~~l~~~~~~~~~ 128 (345)
T 3oix_A 49 NCLMNAAGVYCMTREELAAIDHSEAGSFVTXTGTLEERAGNPQPRYADTKLGSINSMGLPNLGINYYLDYVTELQKQPDS 128 (345)
T ss_dssp CSEEECTTSSCSSHHHHHHHHTSSCSBCBCCCBCSSCBCCSCSCCEEECSSEEEECCCCCBSCHHHHHHHHHHHHHSTTC
T ss_pred CCCEEcCCCCCCCHHHHHHHHHcCCCeEEeeeecCCCCCCCCCCcEEecccchhccCCCCChhHHHHHHHHHHHhhccCC
Confidence 4666666554 3447788888887776654200 111111 111 23332 344432 357
Q ss_pred CCeeEEEEecChhhHHHHH---HHcCCC-EEEEccccc----------ccccHHHHHHHHHHc-CCcEEEEECCCCCHHH
Q 023494 116 LPLDVHLMIVEPEQRVPDF---IKAGAD-IVSVHCEQS----------STIHLHRTLNQIKDL-GAKAGVVLNPATSLSA 180 (281)
Q Consensus 116 ~~idaHLmv~dp~~~i~~~---~~aGAd-~Itvh~Ea~----------~~~~i~~~l~~ik~~-G~k~Glai~p~t~ie~ 180 (281)
.|+.+-+.-.+|+.|.+.+ .++|++ +|.+..-+. ..+.+.++++++|+. .+-+.+=+.|++..+.
T Consensus 129 ~pvivsI~g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~~~PV~vKi~p~~~~~~ 208 (345)
T 3oix_A 129 KNHFLSLVGMSPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYFTKPLGIKLPPYFDIVH 208 (345)
T ss_dssp CCCEEEECCSSHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCCCCHHH
T ss_pred CCEEEEecCCCHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHhCCCeEEEECCCCCHHH
Confidence 8999999889999886644 446876 999886431 123466778888765 5678888999988877
Q ss_pred HHHhhcc-----CCEEEEE-------eecC------------CCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC
Q 023494 181 IECVLDV-----VDLVLIM-------SVNP------------GFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG 236 (281)
Q Consensus 181 ~~~~l~~-----vD~Ilvm-------sV~p------------G~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~ 236 (281)
+...++. ++.|... .++. |.+|....|..++.|+++++.++ .+++|...|||.
T Consensus 209 ~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~---~~ipIIg~GGI~ 285 (345)
T 3oix_A 209 FDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLN---PSIQIIGTGGVX 285 (345)
T ss_dssp HHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSC---TTSEEEEESSCC
T ss_pred HHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcC---CCCcEEEECCCC
Confidence 7666543 4544311 1221 12344445666777777766542 248999999998
Q ss_pred -hhcHHHHHHcCCcEEEEccc-ccCCC
Q 023494 237 -PKNAYKVIEAGANALVAGSA-VFGAK 261 (281)
Q Consensus 237 -~e~i~~~~~aGAD~~VvGSa-If~a~ 261 (281)
.+.+.+++.+|||.+-+||+ ++..+
T Consensus 286 s~~da~~~l~aGAd~V~igra~~~~gP 312 (345)
T 3oix_A 286 TGRDAFEHILCGASMVQIGTALHQEGP 312 (345)
T ss_dssp SHHHHHHHHHHTCSEEEESHHHHHHCT
T ss_pred ChHHHHHHHHhCCCEEEEChHHHhcCh
Confidence 88999999999999999999 67544
No 130
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=97.93 E-value=0.00022 Score=65.12 Aligned_cols=174 Identities=14% Similarity=0.122 Sum_probs=112.0
Q ss_pred CccCHHHHHHHHHHcCCCeEEEEeee-CcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEcc
Q 023494 68 NFAKLGEQVKAVELAGCDWIHVDVMD-GRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHC 146 (281)
Q Consensus 68 D~~~l~~~l~~l~~~G~d~iHiDImD-G~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~ 146 (281)
+.....+.++.|.+.|+++|++---. -..+|.+.-..++++.+++..+.++-+|+ .| .+.++.+.++|++.|.+-.
T Consensus 28 ~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~--~~-~~~i~~a~~aG~~~v~i~~ 104 (302)
T 2ftp_A 28 EVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQRPGVTYAALA--PN-LKGFEAALESGVKEVAVFA 104 (302)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTSEEEEEC--CS-HHHHHHHHHTTCCEEEEEE
T ss_pred CHHHHHHHHHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhhcCCCEEEEEe--CC-HHHHHHHHhCCcCEEEEEE
Confidence 33445566778889999998883210 00134443223566777766667777766 34 3478889999999988743
Q ss_pred ccccc---------------ccHHHHHHHHHHcCCcEEEEECC--------CCCHHHHHHhhc-----cCCEEEEEeecC
Q 023494 147 EQSST---------------IHLHRTLNQIKDLGAKAGVVLNP--------ATSLSAIECVLD-----VVDLVLIMSVNP 198 (281)
Q Consensus 147 Ea~~~---------------~~i~~~l~~ik~~G~k~Glai~p--------~t~ie~~~~~l~-----~vD~IlvmsV~p 198 (281)
-. +. +...+.++.+|++|+++-..+.. .++.+.+.++++ .+|.|.+-..+
T Consensus 105 ~~-s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~DT~- 182 (302)
T 2ftp_A 105 AA-SEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLGDTI- 182 (302)
T ss_dssp ES-CHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEEEESS-
T ss_pred ec-CHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEEeCCC-
Confidence 32 11 23477889999999988654322 266777777664 27888775333
Q ss_pred CCCCCccchhHHHHHHHHHHHhhhcCCCCeEEE----ecCCChhcHHHHHHcCCcEEEE
Q 023494 199 GFGGQSFIESQVKKISDLRRMCLEKGVNPWIEV----DGGVGPKNAYKVIEAGANALVA 253 (281)
Q Consensus 199 G~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~V----DGGI~~e~i~~~~~aGAD~~Vv 253 (281)
|. .......+.++++++.++ +.+|.+ |-|....|....+++|++.|=+
T Consensus 183 G~---~~P~~~~~lv~~l~~~~~----~~~l~~H~Hn~~Gla~An~laAv~aGa~~vd~ 234 (302)
T 2ftp_A 183 GV---GTAGATRRLIEAVASEVP----RERLAGHFHDTYGQALANIYASLLEGIAVFDS 234 (302)
T ss_dssp SC---CCHHHHHHHHHHHTTTSC----GGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEE
T ss_pred CC---cCHHHHHHHHHHHHHhCC----CCeEEEEeCCCccHHHHHHHHHHHhCCCEEEe
Confidence 33 222344566666665442 245655 7899999999999999997743
No 131
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=97.91 E-value=0.00018 Score=65.32 Aligned_cols=172 Identities=15% Similarity=0.118 Sum_probs=112.7
Q ss_pred CHHHHHHHHHHcCCCeEEEEeee-CcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEccccc
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMD-GRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQS 149 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImD-G~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~ 149 (281)
...+.++.|.+.|+++|++---. +.|+|.+.--.+.++.+++.++.++-+|+ .|. +-++.+.++|++.|.+-.-..
T Consensus 27 ~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~~~v~~l~--~n~-~~i~~a~~~G~~~V~i~~~~S 103 (295)
T 1ydn_A 27 DKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRADGVRYSVLV--PNM-KGYEAAAAAHADEIAVFISAS 103 (295)
T ss_dssp HHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEEEEEC--SSH-HHHHHHHHTTCSEEEEEEESC
T ss_pred HHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhCCCCEEEEEe--CCH-HHHHHHHHCCCCEEEEEEecC
Confidence 44455677888999998884221 34556554445777888776667777765 443 467889999999988864221
Q ss_pred --------------ccccHHHHHHHHHHcCCcEEEEECC--------CCCHHHHHHhhc-----cCCEEEEEeecCCCCC
Q 023494 150 --------------STIHLHRTLNQIKDLGAKAGVVLNP--------ATSLSAIECVLD-----VVDLVLIMSVNPGFGG 202 (281)
Q Consensus 150 --------------~~~~i~~~l~~ik~~G~k~Glai~p--------~t~ie~~~~~l~-----~vD~IlvmsV~pG~~G 202 (281)
..+...+.++.+|+.|+++...+.. .++.+.+.++.+ .+|.|.+-.. .|
T Consensus 104 ~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~Dt----~G 179 (295)
T 1ydn_A 104 EGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVSLGDT----IG 179 (295)
T ss_dssp HHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEEEEET----TS
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEecCC----CC
Confidence 1133456688999999998743331 356777766665 2788877532 23
Q ss_pred CccchhHHHHHHHHHHHhhhcCCCCeEEE----ecCCChhcHHHHHHcCCcEEEE
Q 023494 203 QSFIESQVKKISDLRRMCLEKGVNPWIEV----DGGVGPKNAYKVIEAGANALVA 253 (281)
Q Consensus 203 Q~f~~~~l~kI~~lr~l~~~~~~~~~I~V----DGGI~~e~i~~~~~aGAD~~Vv 253 (281)
........+.++++++..+ +.++.+ |-|....|....+++|++.+=+
T Consensus 180 ~~~P~~~~~lv~~l~~~~~----~~~l~~H~Hn~~Gla~an~l~Ai~aG~~~vd~ 230 (295)
T 1ydn_A 180 RGTPDTVAAMLDAVLAIAP----AHSLAGHYHDTGGRALDNIRVSLEKGLRVFDA 230 (295)
T ss_dssp CCCHHHHHHHHHHHHTTSC----GGGEEEEEBCTTSCHHHHHHHHHHHTCCEEEE
T ss_pred CcCHHHHHHHHHHHHHhCC----CCeEEEEECCCcchHHHHHHHHHHhCCCEEEe
Confidence 2222344566676665542 145555 6788888999999999998765
No 132
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=97.88 E-value=0.00025 Score=66.83 Aligned_cols=196 Identities=22% Similarity=0.286 Sum_probs=124.4
Q ss_pred eEEEeccCccCHHHHHHHHHHcCCCeEEEEee-----eCccccc-------------cc---CCHHH-HHHcCcC-----
Q 023494 61 SPSILSANFAKLGEQVKAVELAGCDWIHVDVM-----DGRFVPN-------------IT---IGPLV-VDALRPV----- 113 (281)
Q Consensus 61 ~pSila~D~~~l~~~l~~l~~~G~d~iHiDIm-----DG~fvpn-------------~~---~G~~~-I~~ir~~----- 113 (281)
.|-++|+=+..-.++++.+.+.|...+.+-=. .|+--|. +. .|.+. ++.+++.
T Consensus 61 NPvglAaG~~~~~~~~~~~~~~g~G~v~~ktvt~~pq~GNp~PR~~~~~~~~~~iN~~G~~N~G~~~~~~~l~~~~~~~~ 140 (367)
T 3zwt_A 61 NPVGIAAGFDKHGEAVDGLYKMGFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINRYGFNSHGLSVVEHRLRARQQKQA 140 (367)
T ss_dssp SSEEECTTSSTTSSSHHHHHHTTCSEEEEEEECSSCBCCSCSCCEEEEGGGTEEEECCCCCBCCHHHHHHHHHTTHHHHH
T ss_pred CCCEeCCCcCCCHHHHHHHHhcCcCeEEeCCccCCCCCCCCCCeEEEecCccceeeccCCCCccHHHHHHHHHHHhhhcc
Confidence 35566655555567788888888888877411 2221121 11 23333 4445431
Q ss_pred ----CCCCeeEEEEec-----ChhhHHHHHHHc--CCCEEEEcccccc---------cccHHHHHHHHHH--------cC
Q 023494 114 ----TDLPLDVHLMIV-----EPEQRVPDFIKA--GADIVSVHCEQSS---------TIHLHRTLNQIKD--------LG 165 (281)
Q Consensus 114 ----t~~~idaHLmv~-----dp~~~i~~~~~a--GAd~Itvh~Ea~~---------~~~i~~~l~~ik~--------~G 165 (281)
.+.|+-+-+--+ ++.+|.+.+..+ ++|++.+-.-+.. .+.+.++++.+++ ..
T Consensus 141 ~~~~~~~pv~vniggn~~t~~~~~dy~~~~~~~~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~ 220 (367)
T 3zwt_A 141 KLTEDGLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHR 220 (367)
T ss_dssp HHHHTTCCEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGC
T ss_pred ccccCCceEEEEEecCCCCCcCHHHHHHHHHHHhhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCC
Confidence 256788877543 567787655443 4899998654310 1235566776664 35
Q ss_pred CcEEEEECCCCCHHHHHHhhc-----cCCEEEEEeecC---------------CCCCCccchhHHHHHHHHHHHhhhcCC
Q 023494 166 AKAGVVLNPATSLSAIECVLD-----VVDLVLIMSVNP---------------GFGGQSFIESQVKKISDLRRMCLEKGV 225 (281)
Q Consensus 166 ~k~Glai~p~t~ie~~~~~l~-----~vD~IlvmsV~p---------------G~~GQ~f~~~~l~kI~~lr~l~~~~~~ 225 (281)
+-+.+=+.|+.+.+.+.++.+ .+|.|.+...-. |.+|....|..++.|+++++.+..
T Consensus 221 ~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~--- 297 (367)
T 3zwt_A 221 PAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQG--- 297 (367)
T ss_dssp CEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTT---
T ss_pred ceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCC---
Confidence 677788899877655544433 389887642211 122344456667888888877642
Q ss_pred CCeEEEecCCC-hhcHHHHHHcCCcEEEEcccc-cC
Q 023494 226 NPWIEVDGGVG-PKNAYKVIEAGANALVAGSAV-FG 259 (281)
Q Consensus 226 ~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaI-f~ 259 (281)
+++|...|||. .+.+.+++++|||.+-+||++ +.
T Consensus 298 ~ipvI~~GGI~s~~da~~~l~~GAd~V~vgra~l~~ 333 (367)
T 3zwt_A 298 RVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFW 333 (367)
T ss_dssp CSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHH
T ss_pred CceEEEECCCCCHHHHHHHHHcCCCEEEECHHHHhc
Confidence 47899999998 889999999999999999997 54
No 133
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=97.86 E-value=0.00018 Score=66.75 Aligned_cols=128 Identities=16% Similarity=0.196 Sum_probs=85.7
Q ss_pred HHHHcCCCEEEEccccc--------cc----------------ccHHHHHHHHHHc-CCcEEEEECCC------CCHHHH
Q 023494 133 DFIKAGADIVSVHCEQS--------ST----------------IHLHRTLNQIKDL-GAKAGVVLNPA------TSLSAI 181 (281)
Q Consensus 133 ~~~~aGAd~Itvh~Ea~--------~~----------------~~i~~~l~~ik~~-G~k~Glai~p~------t~ie~~ 181 (281)
.+.++|.|.|-+|.-.. +. .-+.++++++|+. +..+++=+++. .+.+..
T Consensus 152 ~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~~g~~~~~~ 231 (338)
T 1z41_A 152 RAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDKGLDIADH 231 (338)
T ss_dssp HHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTTSCCHHHH
T ss_pred HHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCCCCCCHHHH
Confidence 34678999999996420 00 1146778888775 78899988874 344444
Q ss_pred HHhhc-----cCCEEEEEeecCCCCCC--ccch-hHHHHHHHHHHHhhhcCCCCeEEEecCC-ChhcHHHHHHcC-CcEE
Q 023494 182 ECVLD-----VVDLVLIMSVNPGFGGQ--SFIE-SQVKKISDLRRMCLEKGVNPWIEVDGGV-GPKNAYKVIEAG-ANAL 251 (281)
Q Consensus 182 ~~~l~-----~vD~IlvmsV~pG~~GQ--~f~~-~~l~kI~~lr~l~~~~~~~~~I~VDGGI-~~e~i~~~~~aG-AD~~ 251 (281)
.+++. .+|+|-+... +...+ +..+ ..++-++++++.. +++|.+.||| +++.+.++++.| ||.+
T Consensus 232 ~~~a~~l~~~Gvd~i~v~~~--~~~~~~~~~~~~~~~~~~~~ir~~~-----~iPVi~~Ggi~s~~~a~~~l~~G~aD~V 304 (338)
T 1z41_A 232 IGFAKWMKEQGVDLIDCSSG--ALVHADINVFPGYQVSFAEKIREQA-----DMATGAVGMITDGSMAEEILQNGRADLI 304 (338)
T ss_dssp HHHHHHHHHTTCCEEEEECC--CSSCCCCCCCTTTTHHHHHHHHHHH-----CCEEEECSSCCSHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHcCCCEEEEecC--ccccCCCCCCccchHHHHHHHHHHC-----CCCEEEECCCCCHHHHHHHHHcCCceEE
Confidence 33332 2899877532 11112 1112 2355566666654 3789999999 699999999999 9999
Q ss_pred EEcccccCCCCHHHHH
Q 023494 252 VAGSAVFGAKDYAEAI 267 (281)
Q Consensus 252 VvGSaIf~a~dp~~~~ 267 (281)
.+||+++..+|.-..+
T Consensus 305 ~iGR~~i~nPdl~~ki 320 (338)
T 1z41_A 305 FIGRELLRDPFFARTA 320 (338)
T ss_dssp EECHHHHHCTTHHHHH
T ss_pred eecHHHHhCchHHHHH
Confidence 9999999877765443
No 134
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=97.84 E-value=0.00012 Score=63.05 Aligned_cols=99 Identities=15% Similarity=0.181 Sum_probs=67.0
Q ss_pred cCCCEEEEcccccccccHHHHHHHHHHcCCcEEE--EECCCCCHHHHHHhhc--cCCEEEEEeecCCCCCCccchhHHHH
Q 023494 137 AGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGV--VLNPATSLSAIECVLD--VVDLVLIMSVNPGFGGQSFIESQVKK 212 (281)
Q Consensus 137 aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Gl--ai~p~t~ie~~~~~l~--~vD~IlvmsV~pG~~GQ~f~~~~l~k 212 (281)
.++|++.=. -...++.+|+.|+.+.. .+-.+..++...+.++ .+|+|-+| ||. .|..+
T Consensus 81 ~~pdGIIsT--------k~~~i~~Ak~~gL~tIqR~FliDS~al~~~~~~i~~~~PD~iEiL---PGi-----~p~iI-- 142 (192)
T 3kts_A 81 ICPDGIIST--------RGNAIMKAKQHKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELL---PGI-----IPEQV-- 142 (192)
T ss_dssp TCCSEEEES--------CHHHHHHHHHTTCEEEEEEECCSHHHHHHHHHHHHHHCCSEEEEE---CTT-----CHHHH--
T ss_pred CCCCEEEeC--------cHHHHHHHHHCCCeEEEEEEEEEcchHHHHHHHHhhcCCCEEEEC---Cch-----hHHHH--
Confidence 478877522 23578888999987753 2222233344444444 47999888 773 45554
Q ss_pred HHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEccc-ccC
Q 023494 213 ISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSA-VFG 259 (281)
Q Consensus 213 I~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSa-If~ 259 (281)
+++++.. +.+|-+.|+|+ .|.+..++++||+.++.|.. +++
T Consensus 143 -~~i~~~~-----~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~~LW~ 185 (192)
T 3kts_A 143 -QKMTQKL-----HIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLWE 185 (192)
T ss_dssp -HHHHHHH-----CCCEEEESSCCSHHHHHHHHTTTEEEEEECCGGGGT
T ss_pred -HHHHHhc-----CCCEEEECCcCCHHHHHHHHHcCCeEEEeCCHHHhC
Confidence 4444443 36898999999 88999999999999999944 665
No 135
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=97.83 E-value=0.00014 Score=70.53 Aligned_cols=182 Identities=19% Similarity=0.240 Sum_probs=88.8
Q ss_pred CHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcC-----C--CCCeeEEEEe-cChhhHHHHHHHcCCCEE
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-----T--DLPLDVHLMI-VEPEQRVPDFIKAGADIV 142 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~-----t--~~~idaHLmv-~dp~~~i~~~~~aGAd~I 142 (281)
.+.+.++.+.+.++..+.|==-+|.++=.++. .++++.+... . ...+-+-+-. .+-.+.++.+.++|+|.+
T Consensus 175 ~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~-~Dll~~~~~~~~~~D~~~~l~vga~ig~~~~~~~~a~~l~~aGvd~v 253 (494)
T 1vrd_A 175 SLEKAKEILHQHRIEKLPLVSKDNKLVGLITI-KDIMSVIEHPNAARDEKGRLLVGAAVGTSPETMERVEKLVKAGVDVI 253 (494)
T ss_dssp -----------------------------------CHHHHTCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEH-HHHHhhhccccccccchhhhccccccCcCHhHHHHHHHHHHhCCCEE
Confidence 56677777777777665441112443322222 1233333221 0 1111111111 121345777899999999
Q ss_pred EEcccccccccHHHHHHHHHHc--CCcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCCCC-----ccchhHHHHHH
Q 023494 143 SVHCEQSSTIHLHRTLNQIKDL--GAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQ-----SFIESQVKKIS 214 (281)
Q Consensus 143 tvh~Ea~~~~~i~~~l~~ik~~--G~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ-----~f~~~~l~kI~ 214 (281)
.+|..........+.++++++. ++.+.+- ..+..+..+.+.+ .+|.|.+ +.++|.... .+-...+.-+.
T Consensus 254 ~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g--~~~t~e~a~~l~~~G~d~I~v-~~~~G~~~~~~~~~~~g~p~~~~l~ 330 (494)
T 1vrd_A 254 VIDTAHGHSRRVIETLEMIKADYPDLPVVAG--NVATPEGTEALIKAGADAVKV-GVGPGSICTTRVVAGVGVPQLTAVM 330 (494)
T ss_dssp EECCSCCSSHHHHHHHHHHHHHCTTSCEEEE--EECSHHHHHHHHHTTCSEEEE-CSSCSTTCHHHHHHCCCCCHHHHHH
T ss_pred EEEecCCchHHHHHHHHHHHHHCCCceEEeC--CcCCHHHHHHHHHcCCCEEEE-cCCCCccccccccCCCCccHHHHHH
Confidence 9976532223466788888887 6666542 1234566666554 4999987 666652110 01111234455
Q ss_pred HHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEccccc
Q 023494 215 DLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVF 258 (281)
Q Consensus 215 ~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf 258 (281)
++++.... .+++|.++|||. .+.+.+++++|||.+.+|+++.
T Consensus 331 ~v~~~~~~--~~ipvia~GGI~~~~di~kala~GAd~V~iGr~~l 373 (494)
T 1vrd_A 331 ECSEVARK--YDVPIIADGGIRYSGDIVKALAAGAESVMVGSIFA 373 (494)
T ss_dssp HHHHHHHT--TTCCEEEESCCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred HHHHHHhh--cCCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHh
Confidence 55555432 357899999995 8999999999999999999985
No 136
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=97.81 E-value=0.00016 Score=66.41 Aligned_cols=150 Identities=17% Similarity=0.191 Sum_probs=97.6
Q ss_pred HHHHHHcCcCCCCCeeEEEEecChhhHHHH---HHHcCCCEEEEcccccc---------------cccHHHHHHHHHHc-
Q 023494 104 PLVVDALRPVTDLPLDVHLMIVEPEQRVPD---FIKAGADIVSVHCEQSS---------------TIHLHRTLNQIKDL- 164 (281)
Q Consensus 104 ~~~I~~ir~~t~~~idaHLmv~dp~~~i~~---~~~aGAd~Itvh~Ea~~---------------~~~i~~~l~~ik~~- 164 (281)
....+.+....+.|+.+.|.-.+|..|.+. +.++ +|.|-+|.-+.. ..-+.++++++++.
T Consensus 47 ~~~~~~l~~~~~~~~~~QL~g~~~~~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~ 125 (318)
T 1vhn_A 47 QKTEELLPQPHERNVAVQIFGSEPNELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSV 125 (318)
T ss_dssp HHHHHHSCCTTCTTEEEEEECSCHHHHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHC
T ss_pred HhHHHhhhCcCCCeEEEEeCCCCHHHHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhh
Confidence 345566633367899999998899877553 4567 999999965420 11245677888774
Q ss_pred CCcEEEEECCCCCH----HHHHHhhc-cCCEEEEEeecCCCCCCccc-hhHHHHHHHHHHHhhhcCCCCeEEEecCC-Ch
Q 023494 165 GAKAGVVLNPATSL----SAIECVLD-VVDLVLIMSVNPGFGGQSFI-ESQVKKISDLRRMCLEKGVNPWIEVDGGV-GP 237 (281)
Q Consensus 165 G~k~Glai~p~t~i----e~~~~~l~-~vD~IlvmsV~pG~~GQ~f~-~~~l~kI~~lr~l~~~~~~~~~I~VDGGI-~~ 237 (281)
+..+++-+.++... +..+.+.+ .+|+|.+. .+...|.+. +..++-++++++ +++|.++||| +.
T Consensus 126 ~~pv~vKir~G~~~~~~~~~a~~l~~~G~d~i~v~---g~~~~~~~~~~~~~~~i~~i~~-------~ipVi~~GgI~s~ 195 (318)
T 1vhn_A 126 SGKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFIH---TRTVVQSFTGRAEWKALSVLEK-------RIPTFVSGDIFTP 195 (318)
T ss_dssp SSEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEEE---SSCTTTTTSSCCCGGGGGGSCC-------SSCEEEESSCCSH
T ss_pred CCCEEEEecCCCChHHHHHHHHHHHHhCCCEEEEc---CCCccccCCCCcCHHHHHHHHc-------CCeEEEECCcCCH
Confidence 78888877664322 33444433 38999774 332222111 111233333332 4789999999 58
Q ss_pred hcHHHHHH-cCCcEEEEcccccCCCCHH
Q 023494 238 KNAYKVIE-AGANALVAGSAVFGAKDYA 264 (281)
Q Consensus 238 e~i~~~~~-aGAD~~VvGSaIf~a~dp~ 264 (281)
+.+.++++ .|||.+.+|++++..++.-
T Consensus 196 ~da~~~l~~~gad~V~iGR~~l~~P~l~ 223 (318)
T 1vhn_A 196 EDAKRALEESGCDGLLVARGAIGRPWIF 223 (318)
T ss_dssp HHHHHHHHHHCCSEEEESGGGTTCTTHH
T ss_pred HHHHHHHHcCCCCEEEECHHHHhCcchH
Confidence 99999988 7999999999988766543
No 137
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=97.81 E-value=0.00023 Score=63.51 Aligned_cols=176 Identities=16% Similarity=0.134 Sum_probs=115.8
Q ss_pred HHHHHHHHHHcCCCeEEEEeeeCcccccc-cCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEcccccc
Q 023494 72 LGEQVKAVELAGCDWIHVDVMDGRFVPNI-TIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSS 150 (281)
Q Consensus 72 l~~~l~~l~~~G~d~iHiDImDG~fvpn~-~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~~ 150 (281)
-.+.++.+...|+|++-+|..|+ |.- .--...+..++. .+.++.|-+--.||. +++.+.++|+++|.++--. +
T Consensus 29 ~p~~~e~a~~~gaD~v~lDlEd~---p~~~~~a~~~~~~~~~-~~~~~~VRv~~~~~~-~i~~~l~~g~~gI~~P~V~-s 102 (256)
T 1dxe_A 29 NPISTEVLGLAGFDWLVLDGEHA---PNDISTFIPQLMALKG-SASAPVVRVPTNEPV-IIKRLLDIGFYNFLIPFVE-T 102 (256)
T ss_dssp SHHHHHHHTTSCCSEEEEESSSS---SCCHHHHHHHHHHTTT-CSSEEEEECSSSCHH-HHHHHHHTTCCEEEESCCC-S
T ss_pred CHHHHHHHHhCCCCEEEEcCCCC---CCCHHHHHHHHHHHHh-CCCcEEEECCCCCHH-HHHHHHhcCCceeeecCcC-C
Confidence 34667788889999999999998 421 111222333322 344555533334544 5788889999999998654 3
Q ss_pred cccHHHHHHHHHH----------------------------cCCcEEEEECCCCCHHHHHHhhc--cCCEEEEEee----
Q 023494 151 TIHLHRTLNQIKD----------------------------LGAKAGVVLNPATSLSAIECVLD--VVDLVLIMSV---- 196 (281)
Q Consensus 151 ~~~i~~~l~~ik~----------------------------~G~k~Glai~p~t~ie~~~~~l~--~vD~IlvmsV---- 196 (281)
.+++.++.+.++. ...++++.|....-++.+.+++. .+|.+.+.+.
T Consensus 103 ~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v~~~IEt~~av~~~~eIa~~~~vd~l~iG~~DL~~ 182 (256)
T 1dxe_A 103 KEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDNVDAIAATEGVDGIFVGPSDLAA 182 (256)
T ss_dssp HHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEECSHHHHHTHHHHHTSTTCCEEEECHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEEEEEECCHHHHHhHHHHhCCCCCCEEEEChHHHHH
Confidence 5566666666541 13557777754444567777765 6899988543
Q ss_pred cCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEccc
Q 023494 197 NPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSA 256 (281)
Q Consensus 197 ~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSa 256 (281)
+-|..++...|..+.-++++..-....|. +..+-.+ +++..+.+++.|.+.+.+|+.
T Consensus 183 ~lg~~~~~~~p~v~~a~~~iv~aa~a~G~--~~~v~~~-d~~~~~~~~~~G~~~~s~~~d 239 (256)
T 1dxe_A 183 ALGHLGNASHPDVQKAIQHIFNRASAHGK--PSGILAP-VEADARRYLEWGATFVAVGSD 239 (256)
T ss_dssp HTTCTTCTTSHHHHHHHHHHHHHHHHTTC--CEEEECC-SHHHHHHHHHTTCCEEEEEEH
T ss_pred HhCCCCCCCCHHHHHHHHHHHHHHHHhCC--ceEEecC-CHHHHHHHHHcCCCEEEechH
Confidence 45666677778777777777766666553 4444443 788889999999999999965
No 138
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=97.80 E-value=0.00039 Score=64.77 Aligned_cols=127 Identities=17% Similarity=0.181 Sum_probs=83.4
Q ss_pred HHHcCCCEEEEccccc--------cc------------c----cHHHHHHHHHHc-C--CcEEEEECCC------CCHHH
Q 023494 134 FIKAGADIVSVHCEQS--------ST------------I----HLHRTLNQIKDL-G--AKAGVVLNPA------TSLSA 180 (281)
Q Consensus 134 ~~~aGAd~Itvh~Ea~--------~~------------~----~i~~~l~~ik~~-G--~k~Glai~p~------t~ie~ 180 (281)
+.++|.|.|-+|.-.. +. + -+.++++++|+. | ..+|+=++|. .+.+.
T Consensus 161 a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~~~ 240 (349)
T 3hgj_A 161 ALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGGWSLED 240 (349)
T ss_dssp HHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCHHH
T ss_pred HHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCHHH
Confidence 4678999999997541 00 0 145788888875 3 4589988874 34444
Q ss_pred HHHhh----c-cCCEEEEEeecCCCCCCc---c-chhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-Cc
Q 023494 181 IECVL----D-VVDLVLIMSVNPGFGGQS---F-IESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-AN 249 (281)
Q Consensus 181 ~~~~l----~-~vD~IlvmsV~pG~~GQ~---f-~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD 249 (281)
..+++ + .+|+|-+.. .+...+. . ....++-++++++.. +++|.+.|||+ ++++.++++.| +|
T Consensus 241 ~~~la~~L~~~Gvd~i~vs~--g~~~~~~~~~~~~~~~~~~~~~ir~~~-----~iPVi~~Ggi~t~e~a~~~l~~G~aD 313 (349)
T 3hgj_A 241 TLAFARRLKELGVDLLDCSS--GGVVLRVRIPLAPGFQVPFADAVRKRV-----GLRTGAVGLITTPEQAETLLQAGSAD 313 (349)
T ss_dssp HHHHHHHHHHTTCCEEEEEC--CCSCSSSCCCCCTTTTHHHHHHHHHHH-----CCEEEECSSCCCHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHcCCCEEEEec--CCcCcccccCCCccccHHHHHHHHHHc-----CceEEEECCCCCHHHHHHHHHCCCce
Confidence 33332 2 389987752 1221111 1 112345566666654 37899999995 99999999999 99
Q ss_pred EEEEcccccCCCCHHHHH
Q 023494 250 ALVAGSAVFGAKDYAEAI 267 (281)
Q Consensus 250 ~~VvGSaIf~a~dp~~~~ 267 (281)
.+.+||+++..+|....+
T Consensus 314 ~V~iGR~~lanPdl~~k~ 331 (349)
T 3hgj_A 314 LVLLGRVLLRDPYFPLRA 331 (349)
T ss_dssp EEEESTHHHHCTTHHHHH
T ss_pred EEEecHHHHhCchHHHHH
Confidence 999999999877754433
No 139
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=97.79 E-value=9.3e-05 Score=67.53 Aligned_cols=90 Identities=22% Similarity=0.274 Sum_probs=64.6
Q ss_pred HHHHHHHHHHcC---CcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeE
Q 023494 154 LHRTLNQIKDLG---AKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWI 229 (281)
Q Consensus 154 i~~~l~~ik~~G---~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I 229 (281)
+...++.+|+.. +++|+... | .+++++.+. .+|||++-. |.|.. ++++.+.++. ++++
T Consensus 182 i~~av~~ar~~~~~~~~IgVev~--t-~eea~eA~~aGaD~I~ld~---------~~~~~---~k~av~~v~~---~ipi 243 (286)
T 1x1o_A 182 VGEAVRRAKARAPHYLKVEVEVR--S-LEELEEALEAGADLILLDN---------FPLEA---LREAVRRVGG---RVPL 243 (286)
T ss_dssp HHHHHHHHHHHSCTTSCEEEEES--S-HHHHHHHHHHTCSEEEEES---------CCHHH---HHHHHHHHTT---SSCE
T ss_pred HHHHHHHHHHhCCCCCEEEEEeC--C-HHHHHHHHHcCCCEEEECC---------CCHHH---HHHHHHHhCC---CCeE
Confidence 455677777764 67898774 3 666665544 599998732 33333 3444444432 4789
Q ss_pred EEecCCChhcHHHHHHcCCcEEEEcccccCCC
Q 023494 230 EVDGGVGPKNAYKVIEAGANALVAGSAVFGAK 261 (281)
Q Consensus 230 ~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a~ 261 (281)
++.||||++|++++.++|+|++.+|+.+++++
T Consensus 244 ~AsGGIt~eni~~~a~tGvD~IsVgs~~~~a~ 275 (286)
T 1x1o_A 244 EASGNMTLERAKAAAEAGVDYVSVGALTHSAK 275 (286)
T ss_dssp EEESSCCHHHHHHHHHHTCSEEECTHHHHSCC
T ss_pred EEEcCCCHHHHHHHHHcCCCEEEEcHHHcCCC
Confidence 99999999999999999999999999887653
No 140
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=97.78 E-value=0.0018 Score=57.07 Aligned_cols=171 Identities=19% Similarity=0.152 Sum_probs=97.8
Q ss_pred cCHHHHHHHHHHcCCCeEEEEeeeCccccc--ccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEccc
Q 023494 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPN--ITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCE 147 (281)
Q Consensus 70 ~~l~~~l~~l~~~G~d~iHiDImDG~fvpn--~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~E 147 (281)
.+.++ ++.+ +.|+|++=+ .|.|. -...++..++|.+....+..+--...|+.+..+.+.+.+.|+|-+|.+
T Consensus 29 t~~ed-~~a~-~~gaD~iGf-----If~~~SpR~V~~~~A~~i~~~~~~~~~~v~v~v~~~ei~~~i~~~~ld~vQLHG~ 101 (228)
T 4aaj_A 29 KSLEE-LEIV-EKHADATGV-----VVNSNSKRRIPLEKAREIIENSAIPVFLVSTMVGFSEWAMAIERTGAQYIQVHSN 101 (228)
T ss_dssp CSHHH-HHHH-HTTCSEEEE-----ECSSSSTTBCCHHHHHHHHHHCSSCEEEEECCCCHHHHHHHHHHHTCSEEEECSC
T ss_pred CcHHH-HHHH-HcCCCEEEE-----EecCCCCCCCCHHHHHHHHHhhCCCCEEEeccCchHHHHHHHHhccchheecccc
Confidence 45555 5544 679999744 34442 134677777775533333322222346776666777889999999986
Q ss_pred ccccccHHHHHHHHHH-cCCcEEEEECCCC----CHHHHHHh----h-ccCCEEEEEeecCCCCCCccchhHHHHHHHHH
Q 023494 148 QSSTIHLHRTLNQIKD-LGAKAGVVLNPAT----SLSAIECV----L-DVVDLVLIMSVNPGFGGQSFIESQVKKISDLR 217 (281)
Q Consensus 148 a~~~~~i~~~l~~ik~-~G~k~Glai~p~t----~ie~~~~~----l-~~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr 217 (281)
. ++ +.++.+++ .|+++.=++...+ +.+....+ . ..+|++++=+ +|-+|+.|.-+.++.+.
T Consensus 102 E----~~-~~~~~l~~~~~~~viKa~~v~~~~~~~~~~~~~~~~~~~~~~~d~~LlDs--~GGtG~~fDW~~~~~~~--- 171 (228)
T 4aaj_A 102 A----LP-QTIDTLKKEFGVFVMKAFRVPTISKNPEEDANRLLSEISRYNADMVLLDT--GAGSGKLHDLRVSSLVA--- 171 (228)
T ss_dssp C----CH-HHHHHHHHHHCCEEEEEEECCSSCSCHHHHHHHHHHHHHHSCCSEEEEEC---------CCCHHHHHHH---
T ss_pred c----CH-HHHHHHhhccCceEEEEEEecccccchhhhHHHHHHHHhccCCCEEccCC--CCCCcCcCChHHHHHhh---
Confidence 3 23 34555554 5887766665432 12222221 1 2489998743 46678888755443332
Q ss_pred HHhhhcCCCCeEEEecCCChhcHHHHHH-cCCcEEEEcccccC--CCCHH
Q 023494 218 RMCLEKGVNPWIEVDGGVGPKNAYKVIE-AGANALVAGSAVFG--AKDYA 264 (281)
Q Consensus 218 ~l~~~~~~~~~I~VDGGI~~e~i~~~~~-aGAD~~VvGSaIf~--a~dp~ 264 (281)
. + .++-+.||+|++|+.++++ .++..+=+-|.+=. -.|++
T Consensus 172 ~---~----~p~iLAGGL~peNV~~Ai~~~~P~gVDVsSGVEs~G~KD~~ 214 (228)
T 4aaj_A 172 R---K----IPVIVAGGLNAENVEEVIKVVKPYGVDVSSGVEKYGIKDPK 214 (228)
T ss_dssp H---H----SCEEEESSCCTTTHHHHHHHHCCSEEEESGGGEETTEECHH
T ss_pred h---c----CCeEEECCCCHHHHHHHHHHhCCCEEEeCCCCCCCCCcCHH
Confidence 1 1 3677999999999998776 67777767776642 24664
No 141
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=97.75 E-value=0.00048 Score=62.71 Aligned_cols=168 Identities=13% Similarity=0.083 Sum_probs=107.5
Q ss_pred HHHHHHHHcCCCeEEEEeee-CcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEccccccc-
Q 023494 74 EQVKAVELAGCDWIHVDVMD-GRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSST- 151 (281)
Q Consensus 74 ~~l~~l~~~G~d~iHiDImD-G~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~~~- 151 (281)
+.++.|.+.|+++|++---. ..++|.+.--.+.++.+++.++..+-+. +.+ .+-++.+.++|++.|++-.-. +.
T Consensus 31 ~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~l--~~~-~~~i~~a~~ag~~~v~i~~~~-sd~ 106 (298)
T 2cw6_A 31 KLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKFPGINYPVL--TPN-LKGFEAAVAAGAKEVVIFGAA-SEL 106 (298)
T ss_dssp HHHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCCCTTCBCCEE--CCS-HHHHHHHHHTTCSEEEEEEES-CHH
T ss_pred HHHHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhhCCCCEEEEE--cCC-HHhHHHHHHCCCCEEEEEecC-CHH
Confidence 45667788999988773111 0114555433456777777656666653 334 345888999999999886543 11
Q ss_pred --------------ccHHHHHHHHHHcCCcEEEEECC--------CCCHHHHHHhhc-----cCCEEEEEeecCCCCCCc
Q 023494 152 --------------IHLHRTLNQIKDLGAKAGVVLNP--------ATSLSAIECVLD-----VVDLVLIMSVNPGFGGQS 204 (281)
Q Consensus 152 --------------~~i~~~l~~ik~~G~k~Glai~p--------~t~ie~~~~~l~-----~vD~IlvmsV~pG~~GQ~ 204 (281)
+.+.+.++.+|+.|+++.+.+.. .++.+.+.++.+ .+|.|.+--. .|-.
T Consensus 107 ~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT----~G~~ 182 (298)
T 2cw6_A 107 FTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDT----IGVG 182 (298)
T ss_dssp HHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEEEEEET----TSCC
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEecCC----CCCc
Confidence 13456789999999998765532 246666666543 2787766422 2333
Q ss_pred cchhHHHHHHHHHHHhhhcCCCCeEEE----ecCCChhcHHHHHHcCCcEEEE
Q 023494 205 FIESQVKKISDLRRMCLEKGVNPWIEV----DGGVGPKNAYKVIEAGANALVA 253 (281)
Q Consensus 205 f~~~~l~kI~~lr~l~~~~~~~~~I~V----DGGI~~e~i~~~~~aGAD~~Vv 253 (281)
...+..+.++.+++.++ +.+|.+ |-|....|.-..+++|++.+=.
T Consensus 183 ~P~~~~~lv~~l~~~~~----~~~i~~H~Hn~~Gla~An~laA~~aGa~~vd~ 231 (298)
T 2cw6_A 183 TPGIMKDMLSAVMQEVP----LAALAVHCHDTYGQALANTLMALQMGVSVVDS 231 (298)
T ss_dssp CHHHHHHHHHHHHHHSC----GGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHHHHHHhCC----CCeEEEEECCCCchHHHHHHHHHHhCCCEEEe
Confidence 33444566777777653 245665 7888888888899999997743
No 142
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.75 E-value=0.00014 Score=70.99 Aligned_cols=129 Identities=19% Similarity=0.257 Sum_probs=82.4
Q ss_pred ChhhHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHc--C-CcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCC
Q 023494 126 EPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL--G-AKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFG 201 (281)
Q Consensus 126 dp~~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~--G-~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~ 201 (281)
+....++.+.++|++.+.++..........+.++.+++. + ..+++-- -...+..+.+.+ .+|.|.+ +..||..
T Consensus 242 ~~~e~~~~l~e~gv~~l~Vd~~~g~~~~~~~~i~~lk~~~~~~~~Vi~G~--V~t~~~a~~l~~aGad~I~V-g~~~g~~ 318 (503)
T 1me8_A 242 DFRERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKYGDKVKVGAGN--IVDGEGFRYLADAGADFIKI-GIGGGSI 318 (503)
T ss_dssp SHHHHHHHHHHHTCSEEEECCSCCCSHHHHHHHHHHHHHHGGGSCEEEEE--ECSHHHHHHHHHHTCSEEEE-CSSCSTT
T ss_pred hHHHHHHHHHhhhccceEEecccCcccchhhHHHHHHHhCCCCceEeecc--ccCHHHHHHHHHhCCCeEEe-cccCCcC
Confidence 434457778889999999976532122345667778876 4 5555321 124555555555 4899988 8888642
Q ss_pred --CCc---c-chhHHHHHHHHHHH----hhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEccccc
Q 023494 202 --GQS---F-IESQVKKISDLRRM----CLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVF 258 (281)
Q Consensus 202 --GQ~---f-~~~~l~kI~~lr~l----~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf 258 (281)
... + .| ++.-|.++.+. .++.+.++++..||||. ...+.+++++|||.+.+|+.+.
T Consensus 319 ~~~r~~~~~g~p-~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAlalGA~~V~iG~~~~ 385 (503)
T 1me8_A 319 CITREQKGIGRG-QATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALAMGADFIMLGRYFA 385 (503)
T ss_dssp CCSTTTTCCCCC-HHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred cccccccCCCCc-hHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHHHcCCCEEEECchhh
Confidence 111 1 12 23333333332 22333357899999999 7789999999999999999985
No 143
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=97.74 E-value=0.00021 Score=68.39 Aligned_cols=196 Identities=18% Similarity=0.190 Sum_probs=122.5
Q ss_pred eEEEeccCccCHHHHHHHHHHcCCCeEEEEee-----eC-------------cccccccC---CHH-HHHHcCcC-----
Q 023494 61 SPSILSANFAKLGEQVKAVELAGCDWIHVDVM-----DG-------------RFVPNITI---GPL-VVDALRPV----- 113 (281)
Q Consensus 61 ~pSila~D~~~l~~~l~~l~~~G~d~iHiDIm-----DG-------------~fvpn~~~---G~~-~I~~ir~~----- 113 (281)
.|-.+|+=+..-.+++..+.+.|...+++-=. .| .+++.+.| |.+ +++.+++.
T Consensus 95 NPvglAAG~dk~~~~~~~l~~lGfG~vevgtvT~~pq~GNp~PRlfrl~e~~aiiN~~GfnN~G~d~~~~~l~~~~~~~~ 174 (415)
T 3i65_A 95 NPFGVAAGFDKNGVCIDSILKLGFSFIEIGTITPRGQTGNAKPRIFRDVESRSIINSCGFNNMGCDKVTENLILFRKRQE 174 (415)
T ss_dssp SSEEECTTSSTTCSSHHHHHTTTCSEEEEEEECSSCBCCSCSCCEEEEGGGTEEEECCCSCBCCHHHHHHHHHHHHHHHT
T ss_pred CCCEECCCCCCCHHHHHHHHHcCCCeEEeCcccCCcCCCCCCCeEEeccCCCceeecCCCCchhHHHHHHHHHHHHhhcc
Confidence 47777776666667788898999988877411 11 12222222 433 23444321
Q ss_pred -----CCCCeeEEEEecC-----hhhHHHHHH--HcCCCEEEEccccc---------ccccHHHHHHHHHHc--------
Q 023494 114 -----TDLPLDVHLMIVE-----PEQRVPDFI--KAGADIVSVHCEQS---------STIHLHRTLNQIKDL-------- 164 (281)
Q Consensus 114 -----t~~~idaHLmv~d-----p~~~i~~~~--~aGAd~Itvh~Ea~---------~~~~i~~~l~~ik~~-------- 164 (281)
...++-+-+--+. +++|++.+. ..-+|++.+-.-+. ..+.+.++++++++.
T Consensus 175 ~~~~~~~~~vgvnIg~nk~t~~~~~Dy~~~a~~l~~~ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~ 254 (415)
T 3i65_A 175 EDKLLSKHIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNN 254 (415)
T ss_dssp TCGGGTTCEEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccccccCceEEEEeccccCccccHHHHHHHHHHHHhhCCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhcccc
Confidence 1345556664443 466755332 22389999875431 122356677777653
Q ss_pred -------------CCc-EEEEECCCCCHHHHHHhhc-----cCCEEEEEeec------------C-CCCCCccchhHHHH
Q 023494 165 -------------GAK-AGVVLNPATSLSAIECVLD-----VVDLVLIMSVN------------P-GFGGQSFIESQVKK 212 (281)
Q Consensus 165 -------------G~k-~Glai~p~t~ie~~~~~l~-----~vD~IlvmsV~------------p-G~~GQ~f~~~~l~k 212 (281)
.+- +.+=|.|+.+.+.+.++.+ .+|.|.+...- . |.+|....|..++-
T Consensus 255 ~~~~~~~~~~~~~~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~ 334 (415)
T 3i65_A 255 IMNDEFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKF 334 (415)
T ss_dssp CSCHHHHCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHH
T ss_pred cccccccccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHH
Confidence 345 5778999877554444433 28988764211 1 22344455777888
Q ss_pred HHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccC
Q 023494 213 ISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFG 259 (281)
Q Consensus 213 I~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~ 259 (281)
|+++++.++. +++|...|||. .+.+.+++.+|||.+-+||+++.
T Consensus 335 I~~v~~~v~~---~iPIIg~GGI~s~eDa~e~l~aGAd~VqIgra~l~ 379 (415)
T 3i65_A 335 ICEMYNYTNK---QIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVF 379 (415)
T ss_dssp HHHHHHHTTT---CSCEEECSSCCSHHHHHHHHHHTEEEEEESHHHHH
T ss_pred HHHHHHHhCC---CCCEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHh
Confidence 8888877642 48899999999 88999999999999999999763
No 144
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=97.73 E-value=0.00027 Score=68.98 Aligned_cols=128 Identities=20% Similarity=0.295 Sum_probs=84.1
Q ss_pred hhHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHc--CCcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCCC--
Q 023494 128 EQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL--GAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGG-- 202 (281)
Q Consensus 128 ~~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~--G~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~G-- 202 (281)
.+.++.+.++|+|.|.++..........+.++++++. ++.+++. +. ...+..+.+.+ .+|.|.+ +.-||...
T Consensus 233 ~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g-~v-~t~e~a~~l~~aGaD~I~V-g~g~Gs~~~t 309 (496)
T 4fxs_A 233 EERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGG-NV-ATAEGARALIEAGVSAVKV-GIGPGSICTT 309 (496)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEE-EE-CSHHHHHHHHHHTCSEEEE-CSSCCTTBCH
T ss_pred HHHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCCceEEEc-cc-CcHHHHHHHHHhCCCEEEE-CCCCCcCccc
Confidence 4567788999999999986643223456788888876 5555442 11 24455666655 4999975 22233210
Q ss_pred C---ccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCC
Q 023494 203 Q---SFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGA 260 (281)
Q Consensus 203 Q---~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a 260 (281)
+ .+-...+.-+.++.+...+. +++|.+||||. .+.+.+++++|||.+.+||++...
T Consensus 310 r~~~g~g~p~~~~i~~v~~~~~~~--~iPVIa~GGI~~~~di~kala~GAd~V~iGs~f~~t 369 (496)
T 4fxs_A 310 RIVTGVGVPQITAIADAAGVANEY--GIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAGT 369 (496)
T ss_dssp HHHHCCCCCHHHHHHHHHHHHGGG--TCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTB
T ss_pred ccccCCCccHHHHHHHHHHHhccC--CCeEEEeCCCCCHHHHHHHHHcCCCeEEecHHHhcC
Confidence 0 01112345556666655432 47899999997 889999999999999999998754
No 145
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.73 E-value=0.00028 Score=74.43 Aligned_cols=163 Identities=17% Similarity=0.207 Sum_probs=105.4
Q ss_pred HHHcCcC-CCCCeeEEEEe-cChhhHHH---HHHHcCCCEEEEcccccc--------------cccHHHHHHHHHHc-CC
Q 023494 107 VDALRPV-TDLPLDVHLMI-VEPEQRVP---DFIKAGADIVSVHCEQSS--------------TIHLHRTLNQIKDL-GA 166 (281)
Q Consensus 107 I~~ir~~-t~~~idaHLmv-~dp~~~i~---~~~~aGAd~Itvh~Ea~~--------------~~~i~~~l~~ik~~-G~ 166 (281)
++.+|+. ++.++.+-+|. .++..|.+ .+.++|+|.|.+|.-+.. .+.+.++++++|+. ++
T Consensus 625 i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~ 704 (1025)
T 1gte_A 625 VTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQI 704 (1025)
T ss_dssp HHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCC
Confidence 3444553 46788888876 57776644 455789999999965311 12256788888876 77
Q ss_pred cEEEEECCCCC-HHHHHHhh-c-cCCEEEEEe-------ec------C-----------CCCCCccchhHHHHHHHHHHH
Q 023494 167 KAGVVLNPATS-LSAIECVL-D-VVDLVLIMS-------VN------P-----------GFGGQSFIESQVKKISDLRRM 219 (281)
Q Consensus 167 k~Glai~p~t~-ie~~~~~l-~-~vD~Ilvms-------V~------p-----------G~~GQ~f~~~~l~kI~~lr~l 219 (281)
.+.+=+.|+.. +..+...+ + .+|.|.+.. ++ | |..|....|..++-++++++.
T Consensus 705 Pv~vK~~~~~~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~ 784 (1025)
T 1gte_A 705 PFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARA 784 (1025)
T ss_dssp CEEEEECSCSSCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHH
T ss_pred ceEEEeCCChHHHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHH
Confidence 88887777633 33333332 2 389987720 11 1 122333344456677777765
Q ss_pred hhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccC-CCC-HHHHHHHHHHh
Q 023494 220 CLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFG-AKD-YAEAIKGIKTS 273 (281)
Q Consensus 220 ~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~-a~d-p~~~~~~l~~~ 273 (281)
.+ +++|...|||. .+.+.+++.+|||.+.+|++++. ..+ .....++|+..
T Consensus 785 ~~----~ipvi~~GGI~s~~da~~~l~~Ga~~v~vg~~~l~~~~~~~~~~~~~l~~~ 837 (1025)
T 1gte_A 785 LP----GFPILATGGIDSAESGLQFLHSGASVLQVCSAVQNQDFTVIQDYCTGLKAL 837 (1025)
T ss_dssp ST----TCCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTSCTTHHHHHHHHHHHH
T ss_pred cC----CCCEEEecCcCCHHHHHHHHHcCCCEEEEeeccccCCccHHHHHHHHHHHH
Confidence 42 47899999996 89999999999999999999875 333 34455555543
No 146
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=97.66 E-value=0.00051 Score=61.62 Aligned_cols=172 Identities=17% Similarity=0.139 Sum_probs=112.1
Q ss_pred HHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcC--CCCCeeEEEEecChh-hHHHHHHHcCCCEEEEcccccc
Q 023494 74 EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV--TDLPLDVHLMIVEPE-QRVPDFIKAGADIVSVHCEQSS 150 (281)
Q Consensus 74 ~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~--t~~~idaHLmv~dp~-~~i~~~~~aGAd~Itvh~Ea~~ 150 (281)
+.++.+...|+||+=+|..|+.+... +....++.. .+....| -|+.+. ..++.+.++|+++|.++--. +
T Consensus 28 ~~~e~a~~~g~D~vilDlEhav~~~~-----k~~~~l~a~~~~~~~~~V--RVn~~~~~di~~~ld~G~~gI~lP~v~-s 99 (261)
T 3qz6_A 28 DIVRIYAEAGLDYFIVDCEHAAYTFR-----EINHLVSVAKNAGVSVLV--RIPQVDRAHVQRLLDIGAEGFMIPGVQ-S 99 (261)
T ss_dssp THHHHHHHTTCSEEEEESSSSCCCHH-----HHHHHHHHHHHHTCEEEE--ECSSCCHHHHHHHHHHTCCEEEETTCC-S
T ss_pred HHHHHHhcCCcCEEEEeccCCCCCHH-----HHHHHHHHHhhcCCeEEE--EeCCCCHHHHHHHHhcCCCEEEECCcC-C
Confidence 44566777899999999999954321 222223221 2333333 333332 25778889999999998543 3
Q ss_pred cccHHHHHHHHHH-----------------------------cCCcEEEEECCCCCHHHHHHhh--ccCCEEEEEee---
Q 023494 151 TIHLHRTLNQIKD-----------------------------LGAKAGVVLNPATSLSAIECVL--DVVDLVLIMSV--- 196 (281)
Q Consensus 151 ~~~i~~~l~~ik~-----------------------------~G~k~Glai~p~t~ie~~~~~l--~~vD~IlvmsV--- 196 (281)
.+++.++.+.++- ..+++++.|....-++.+.+++ +.+|.+.+.+.
T Consensus 100 aed~~~~~~~~~~~p~G~Rg~~~~r~~~~g~~~~~~y~~~~~~~~~v~~mIEt~~av~~~~eIaa~~~vd~l~iG~~DL~ 179 (261)
T 3qz6_A 100 AETMRETVRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQERNDEIFIMAQIEHVKAVEDIDSILAVQGVDAVIFGPRDLS 179 (261)
T ss_dssp HHHHHHHHHHHSCTTTCCCCCCCGGGGTTCCCCHHHHHHHHHTTCEEEEEECCHHHHHTHHHHHTSTTCCEEEECHHHHH
T ss_pred HHHHHHHHHHhccCCCCCcCcccchhhhccccchhhHHhcCCCCeEEEEEECCHHHHHHHHHHhCCCCCCEEEECHHHHH
Confidence 5667776666531 1356777775555567788887 56899988543
Q ss_pred -cCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcH-HHHHHcCCcEEEEccc
Q 023494 197 -NPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNA-YKVIEAGANALVAGSA 256 (281)
Q Consensus 197 -~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i-~~~~~aGAD~~VvGSa 256 (281)
.-|..++...|..+.-++++..-....| .+..+=++ +++.+ +.+++.|++.+.+|+.
T Consensus 180 ~~lg~~~~~~~p~v~~a~~~iv~aa~aaG--~~~g~~~~-~~~~~~~~~~~~G~~~~s~~~D 238 (261)
T 3qz6_A 180 NDLGIIGQTEHPKVYECYEKVYRAADRQG--VVKGFFTA-ADAAKMGWAVERGAQMLLWSGD 238 (261)
T ss_dssp HHTTCTTCTTCHHHHHHHHHHHHHHHHHT--CEEEEEES-SCGGGGHHHHHTTCCEEEEEEH
T ss_pred HHhCCCCCCCCHHHHHHHHHHHHHHHHhC--CCEEEEeC-CHHHHHHHHHHCCCCEEEEhhH
Confidence 3465566666777766666666655554 45444433 78888 8999999999999965
No 147
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=97.64 E-value=0.00054 Score=64.60 Aligned_cols=148 Identities=19% Similarity=0.177 Sum_probs=86.4
Q ss_pred HHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEcccc-----ccc-ccHHHHHHHHHH-cCCcEEEEECCCCCH
Q 023494 106 VVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQ-----SST-IHLHRTLNQIKD-LGAKAGVVLNPATSL 178 (281)
Q Consensus 106 ~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea-----~~~-~~i~~~l~~ik~-~G~k~Glai~p~t~i 178 (281)
.++++++. +.++.+-+...+..++.+.+.++|+|.+.+|... ... .+... +.++++ .++.+.+ ..-...
T Consensus 147 ~i~~~~~~-g~~v~~~v~~~~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~-i~~l~~~~~~pvi~--ggi~t~ 222 (393)
T 2qr6_A 147 RIAQVRDS-GEIVAVRVSPQNVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALN-LKEFIGSLDVPVIA--GGVNDY 222 (393)
T ss_dssp HHHHHHHT-TSCCEEEECTTTHHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----C-HHHHHHHCSSCEEE--ECCCSH
T ss_pred HHHHHhhc-CCeEEEEeCCccHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHH-HHHHHHhcCCCEEE--CCcCCH
Confidence 44555553 5666665544455556667778999999998421 000 02333 344443 4655554 222445
Q ss_pred HHHHHhhc-cCCEEEEEeecCCCCCC---ccchhHHHHHHHHHHH----hhhcCC-CCeEEEecCCC-hhcHHHHHHcCC
Q 023494 179 SAIECVLD-VVDLVLIMSVNPGFGGQ---SFIESQVKKISDLRRM----CLEKGV-NPWIEVDGGVG-PKNAYKVIEAGA 248 (281)
Q Consensus 179 e~~~~~l~-~vD~IlvmsV~pG~~GQ---~f~~~~l~kI~~lr~l----~~~~~~-~~~I~VDGGI~-~e~i~~~~~aGA 248 (281)
+..+.+.+ .+|.|.+ +. -|.++. .+-+..++-|.++++. +++.+. +++|.+||||. .+++.+++.+||
T Consensus 223 e~a~~~~~~Gad~i~v-g~-Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~kalalGA 300 (393)
T 2qr6_A 223 TTALHMMRTGAVGIIV-GG-GENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVVKAIACGA 300 (393)
T ss_dssp HHHHHHHTTTCSEEEE-SC-CSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCEEEE-CC-CcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHHHHHHcCC
Confidence 66666665 4999987 32 111111 1112344555555444 121221 37899999996 889999999999
Q ss_pred cEEEEcccccC
Q 023494 249 NALVAGSAVFG 259 (281)
Q Consensus 249 D~~VvGSaIf~ 259 (281)
|.+.+|+++..
T Consensus 301 ~~V~iG~~~l~ 311 (393)
T 2qr6_A 301 DAVVLGSPLAR 311 (393)
T ss_dssp SEEEECGGGGG
T ss_pred CEEEECHHHHc
Confidence 99999999743
No 148
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=97.62 E-value=0.00089 Score=61.45 Aligned_cols=167 Identities=10% Similarity=0.133 Sum_probs=106.6
Q ss_pred CHHHHHHHHHHcCCCeEEEEeeeCcc-----cccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEc
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMDGRF-----VPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVH 145 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImDG~f-----vpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh 145 (281)
+-.+.++.|.+.|+++|++ |.| +|.+.-..+.++.+++.++..+-+ ++.| .+-++.+.++|++.|.+-
T Consensus 29 ~k~~i~~~L~~~Gv~~IE~----g~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~--l~~~-~~~i~~a~~~g~~~v~i~ 101 (307)
T 1ydo_A 29 DKITWINQLSRTGLSYIEI----TSFVHPKWIPALRDAIDVAKGIDREKGVTYAA--LVPN-QRGLENALEGGINEACVF 101 (307)
T ss_dssp HHHHHHHHHHTTTCSEEEE----EECSCTTTCGGGTTHHHHHHHSCCCTTCEEEE--ECCS-HHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEE----CCCcCcccccccCCHHHHHHHhhhcCCCeEEE--EeCC-HHhHHHHHhCCcCEEEEE
Confidence 3445567788899999988 434 344433335667776655555554 3344 335788999999998876
Q ss_pred ccccc--------------cccHHHHHHHHHHcCCcEEEEECCC--------CCHHHHHHhhcc-----CCEEEEEeecC
Q 023494 146 CEQSS--------------TIHLHRTLNQIKDLGAKAGVVLNPA--------TSLSAIECVLDV-----VDLVLIMSVNP 198 (281)
Q Consensus 146 ~Ea~~--------------~~~i~~~l~~ik~~G~k~Glai~p~--------t~ie~~~~~l~~-----vD~IlvmsV~p 198 (281)
.-... .+.+.+.++.+|+.|+++...+... ++.+.+.++++. +|.|.+-
T Consensus 102 ~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~---- 177 (307)
T 1ydo_A 102 MSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELSLG---- 177 (307)
T ss_dssp EESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEEEE----
T ss_pred eecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEEc----
Confidence 54310 1235678899999999986544321 456666665542 7877663
Q ss_pred CCCCCccchhHHHHHHHHHHHhhhcCCCCeEEE----ecCCChhcHHHHHHcCCcEEE
Q 023494 199 GFGGQSFIESQVKKISDLRRMCLEKGVNPWIEV----DGGVGPKNAYKVIEAGANALV 252 (281)
Q Consensus 199 G~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~V----DGGI~~e~i~~~~~aGAD~~V 252 (281)
-..|-....++.+.++.+++.++ +.+|.+ |-|....|.-..+++||+.|=
T Consensus 178 DT~G~~~P~~v~~lv~~l~~~~~----~~~l~~H~Hnd~Gla~AN~laAv~aGa~~vd 231 (307)
T 1ydo_A 178 DTIGAANPAQVETVLEALLARFP----ANQIALHFHDTRGTALANMVTALQMGITVFD 231 (307)
T ss_dssp CSSCCCCHHHHHHHHHHHHTTSC----GGGEEEECBGGGSCHHHHHHHHHHHTCCEEE
T ss_pred CCCCCcCHHHHHHHHHHHHHhCC----CCeEEEEECCCCchHHHHHHHHHHhCCCEEE
Confidence 22333233344555666665442 256776 789999999999999999774
No 149
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=97.61 E-value=0.00069 Score=75.98 Aligned_cols=145 Identities=19% Similarity=0.289 Sum_probs=101.7
Q ss_pred HHHHHcCcCC--CCCeeEEEEecChh------hHHHHHHHcCCCE--EEEcccccccccHHHHHHHHHHcCCcEEEEECC
Q 023494 105 LVVDALRPVT--DLPLDVHLMIVEPE------QRVPDFIKAGADI--VSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNP 174 (281)
Q Consensus 105 ~~I~~ir~~t--~~~idaHLmv~dp~------~~i~~~~~aGAd~--Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p 174 (281)
+.|+++|+.+ +.++-+.+|+.+|. ..++.+.+.|++. |+++.-. ...++..+.+++.|+++.... +
T Consensus 625 ~~i~~vk~~~~~~~p~gvN~~~~~p~~~~~~~~~~~~~~~~gv~i~gv~~~~G~---p~~e~~~~~l~~~gi~~i~~v-~ 700 (2060)
T 2uva_G 625 DAISKIEKAIPPGRGITVNLIYVNPRAMGWQIPLLGRLRADGVPIEGLTIGAGV---PSIEVANEYIQTLGIRHISFK-P 700 (2060)
T ss_dssp HHHHHHGGGSCTTCCEEEEEETTCTTHHHHHHHHHHHHHTTTCCEEEEEEESSC---CCHHHHHHHHHHSCCSEEEEC-C
T ss_pred HHHHHHHhhcccCCCeEecccccCcccchhHHHHHHHHHHcCCCcceEeecCCC---CCHHHHHHHHHHcCCeEEEec-C
Confidence 4567777776 68999999998887 4577788999999 8887653 345678888999999887433 3
Q ss_pred CCCHHHHHH---hhc-cCCEEEEEeecCC-CCCC-cc---chhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHH
Q 023494 175 ATSLSAIEC---VLD-VVDLVLIMSVNPG-FGGQ-SF---IESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVI 244 (281)
Q Consensus 175 ~t~ie~~~~---~l~-~vD~IlvmsV~pG-~~GQ-~f---~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~ 244 (281)
+ ..+..+. +.+ .+|.|.+|-++-+ .+|. .+ ....+..+.++++.. ++++.++|||. .+.+..++
T Consensus 701 ~-~~~a~~~v~~l~~aG~D~iV~~q~~G~eaGGH~g~~d~~~~~l~lv~~i~~~~-----~ipviaaGGI~~g~~i~aal 774 (2060)
T 2uva_G 701 G-SVDAIQQVINIAKANPTFPIILQWTGGRGGGHHSFEDFHQPILLMYSRIRKCS-----NIVLVAGSGFGGSEDTYPYL 774 (2060)
T ss_dssp C-SHHHHHHHHHHHHHCTTSCEEEEECCTTSSSSCCSCCSHHHHHHHHHHHHTST-----TEEEEEESSCCSHHHHHHHH
T ss_pred C-HHHHHHHHHHHHHcCCCEEEEeeeEcccCCCCCCcccccchHHHHHHHHHHHc-----CCCEEEeCCCCCHHHHHHHh
Confidence 3 3332222 233 4899886655521 1222 12 244556666666543 47899999999 77888999
Q ss_pred -----------HcCCcEEEEcccccC
Q 023494 245 -----------EAGANALVAGSAVFG 259 (281)
Q Consensus 245 -----------~aGAD~~VvGSaIf~ 259 (281)
.+|||.+-+||.+..
T Consensus 775 tg~ws~~~g~palGAdgV~~GT~f~~ 800 (2060)
T 2uva_G 775 TGSWSTKFGYPPMPFDGCMFGSRMMT 800 (2060)
T ss_dssp HTCGGGTTTSCCCCCSCEEESGGGGG
T ss_pred cCcchhhcCCCCCCCCEEEEchhhhc
Confidence 999999999988653
No 150
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=97.57 E-value=8.5e-05 Score=67.99 Aligned_cols=93 Identities=13% Similarity=0.174 Sum_probs=49.8
Q ss_pred HHHHHHHHHHc-C--CcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcC---CC
Q 023494 154 LHRTLNQIKDL-G--AKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKG---VN 226 (281)
Q Consensus 154 i~~~l~~ik~~-G--~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~---~~ 226 (281)
+.+.++.+|+. + .++++.. .|. +++.+.++ .+|+|.+-+ |.+ +.++++++.++..+ .+
T Consensus 185 i~~ai~~~r~~~~~~~~i~vev--~tl-ee~~~A~~aGaD~I~ld~---------~~~---~~l~~~v~~l~~~~~g~~~ 249 (294)
T 3c2e_A 185 ITNAVKNARAVCGFAVKIEVEC--LSE-DEATEAIEAGADVIMLDN---------FKG---DGLKMCAQSLKNKWNGKKH 249 (294)
T ss_dssp HHHHHHHHHHHHCTTSCEEEEC--SSS-HHHHHHHHHTCSEEECCC---------------------------------C
T ss_pred HHHHHHHHHHhcCcCCeEEEec--CCH-HHHHHHHHcCCCEEEECC---------CCH---HHHHHHHHHhcccccCCCC
Confidence 45567777764 3 5777765 344 44444333 599997521 223 34445455544321 24
Q ss_pred CeEEEecCCChhcHHHHHHcCCcEEEEcccccCCC
Q 023494 227 PWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAK 261 (281)
Q Consensus 227 ~~I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a~ 261 (281)
++|++.|||+++|+.++.++|||.+.+||.+++++
T Consensus 250 v~I~ASGGIt~~ni~~~~~~GvD~i~vGs~i~~a~ 284 (294)
T 3c2e_A 250 FLLECSGGLNLDNLEEYLCDDIDIYSTSSIHQGTP 284 (294)
T ss_dssp CEEEEECCCCC------CCCSCSEEECGGGTSSCC
T ss_pred eEEEEECCCCHHHHHHHHHcCCCEEEEechhcCCC
Confidence 78999999999999999999999999999988654
No 151
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=97.56 E-value=0.00085 Score=60.28 Aligned_cols=175 Identities=15% Similarity=0.151 Sum_probs=113.1
Q ss_pred HHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCc--CCCCCeeEEEEecChhhHHHHHHHcCCCEEEEccccc
Q 023494 72 LGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRP--VTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQS 149 (281)
Q Consensus 72 l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~--~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~ 149 (281)
-.+.++.+...|+|++-+|..|+.+ .. ..+...++. ..+.+..|-+--.||. .++.+.++|++.|.++.-.
T Consensus 28 ~p~~~e~a~~~GaD~v~lDlE~~~~--~~---~~~~~~~~a~~~~~~~~~VRv~~~~~~-~i~~~l~~g~~~I~~P~V~- 100 (267)
T 2vws_A 28 TAYMAEIAATSGYDWLLIDGEHAPN--TI---QDLYHQLQAVAPYASQPVIRPVEGSKP-LIKQVLDIGAQTLLIPMVD- 100 (267)
T ss_dssp CHHHHHHHHTTCCSEEEEETTTSCC--CH---HHHHHHHHHHTTSSSEEEEECSSCCHH-HHHHHHHTTCCEEEECCCC-
T ss_pred CHHHHHHHHhCCCCEEEEcCCCCCC--CH---HHHHHHHHHHHhCCCcEEEEeCCCCHH-HHHHHHHhCCCEEEeCCCC-
Confidence 3456778888999999999888832 11 122222222 1234455544334543 5677889999999988654
Q ss_pred ccccHHHHHHHHHH-----------------c------------CCcEEEEECCCCCHHHHHHhhcc--CCEEEEEee--
Q 023494 150 STIHLHRTLNQIKD-----------------L------------GAKAGVVLNPATSLSAIECVLDV--VDLVLIMSV-- 196 (281)
Q Consensus 150 ~~~~i~~~l~~ik~-----------------~------------G~k~Glai~p~t~ie~~~~~l~~--vD~IlvmsV-- 196 (281)
+.++++++.+.++. + ...+++.|....-++.+.+++.. +|.+.+.+.
T Consensus 101 s~ee~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~v~~~IEt~~av~~~~eIa~~~gvd~l~iG~~DL 180 (267)
T 2vws_A 101 TAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADL 180 (267)
T ss_dssp SHHHHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEECCSHHHHHTHHHHHTSTTCCEEEECHHHH
T ss_pred CHHHHHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccEEEEEECCHHHHHHHHHHhCCCCCCEEEEChHHH
Confidence 34566666665431 0 14566666444455777887754 899988543
Q ss_pred --cCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEccc
Q 023494 197 --NPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSA 256 (281)
Q Consensus 197 --~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSa 256 (281)
+-|..++...|..+.-++++..-...+| .+..+-.+ +++..+.+++.|.+.+.+|+.
T Consensus 181 ~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG--~~~~v~~~-d~~~a~~~~~~G~~~~s~~~d 239 (267)
T 2vws_A 181 SASLGYPDNAGHPEVQRIIETSIRRIRAAG--KAAGFLAV-APDMAQQCLAWGANFVAVGVD 239 (267)
T ss_dssp HHHTTCSSSCCTHHHHHHHHHHHHHHHHTT--CEEEEECS-SHHHHHHHHHTTCCEEEEEEH
T ss_pred HHHhCCCCCCCCHHHHHHHHHHHHHHHHhC--CeEEEecC-CHHHHHHHHHCCCCEEEEchH
Confidence 4566677777877777777766666654 34444333 788889999999999999965
No 152
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=97.53 E-value=0.00094 Score=62.66 Aligned_cols=124 Identities=22% Similarity=0.308 Sum_probs=81.3
Q ss_pred HHHcCCCEEEEccccc--------c-----c-----------ccHHHHHHHHHHc-CC-cEEEEECCCC---------CH
Q 023494 134 FIKAGADIVSVHCEQS--------S-----T-----------IHLHRTLNQIKDL-GA-KAGVVLNPAT---------SL 178 (281)
Q Consensus 134 ~~~aGAd~Itvh~Ea~--------~-----~-----------~~i~~~l~~ik~~-G~-k~Glai~p~t---------~i 178 (281)
+.++|+|.|-+|.-.. + . .-+.++++++|+. |. .+++=|+|.. +.
T Consensus 170 a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~~~~~~~~~ 249 (365)
T 2gou_A 170 AMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNGTVDADPI 249 (365)
T ss_dssp HHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTTSCCCSSHH
T ss_pred HHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccCCCCCCCCH
Confidence 4689999999997320 0 0 0145677787764 43 7888888742 33
Q ss_pred HHHHHhh---c--cCCEEEEEeecCCCCC-CccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcC-CcEE
Q 023494 179 SAIECVL---D--VVDLVLIMSVNPGFGG-QSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAG-ANAL 251 (281)
Q Consensus 179 e~~~~~l---~--~vD~IlvmsV~pG~~G-Q~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aG-AD~~ 251 (281)
+...+++ . .+|+|.+... .+.+ ..+ + ++.++++++.. +++|.+-|||+++++.++++.| ||.+
T Consensus 250 ~~~~~~a~~l~~~G~d~i~v~~~--~~~~~~~~-~--~~~~~~i~~~~-----~iPvi~~Ggi~~~~a~~~l~~g~aD~V 319 (365)
T 2gou_A 250 LTYTAAAALLNKHRIVYLHIAEV--DWDDAPDT-P--VSFKRALREAY-----QGVLIYAGRYNAEKAEQAINDGLADMI 319 (365)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECC--BTTBCCCC-C--HHHHHHHHHHC-----CSEEEEESSCCHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeCC--CcCCCCCc-c--HHHHHHHHHHC-----CCcEEEeCCCCHHHHHHHHHCCCccee
Confidence 3333332 2 3899977532 1211 112 1 24455666554 4688899999999999999999 9999
Q ss_pred EEcccccCCCCHHHHH
Q 023494 252 VAGSAVFGAKDYAEAI 267 (281)
Q Consensus 252 VvGSaIf~a~dp~~~~ 267 (281)
-+||+++..++....+
T Consensus 320 ~igR~~i~~P~l~~~~ 335 (365)
T 2gou_A 320 GFGRPFIANPDLPERL 335 (365)
T ss_dssp ECCHHHHHCTTHHHHH
T ss_pred hhcHHHHhCchHHHHH
Confidence 9999998777765444
No 153
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=97.51 E-value=0.0019 Score=59.93 Aligned_cols=127 Identities=17% Similarity=0.180 Sum_probs=83.0
Q ss_pred HHHcCCCEEEEcccc--------cc------------cc----cHHHHHHHHHHc-CCcEEEEECCCC------CHHHHH
Q 023494 134 FIKAGADIVSVHCEQ--------SS------------TI----HLHRTLNQIKDL-GAKAGVVLNPAT------SLSAIE 182 (281)
Q Consensus 134 ~~~aGAd~Itvh~Ea--------~~------------~~----~i~~~l~~ik~~-G~k~Glai~p~t------~ie~~~ 182 (281)
+.++|.|.|-+|.-. .+ .+ -+.++++++|+. +..+++=++|.. +.+...
T Consensus 153 a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~~~~~~ 232 (340)
T 3gr7_A 153 AKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHPDGLTAKDYV 232 (340)
T ss_dssp HHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTTSCCGGGHH
T ss_pred HHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCHHHHH
Confidence 457899999999652 00 00 145778888775 778898888752 333333
Q ss_pred Hhh----c-cCCEEEEEeecCCCCCCc--cc-hhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEE
Q 023494 183 CVL----D-VVDLVLIMSVNPGFGGQS--FI-ESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALV 252 (281)
Q Consensus 183 ~~l----~-~vD~IlvmsV~pG~~GQ~--f~-~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~V 252 (281)
+++ + .+|+|-+.. .+...++ .. ...++-++++++.. +++|.+-|||+ ++.+.++++.| ||.+.
T Consensus 233 ~la~~L~~~Gvd~i~vs~--g~~~~~~~~~~~~~~~~~~~~ik~~~-----~iPVi~~GgI~s~e~a~~~L~~G~aD~V~ 305 (340)
T 3gr7_A 233 PYAKRMKEQGVDLVDVSS--GAIVPARMNVYPGYQVPFAELIRREA-----DIPTGAVGLITSGWQAEEILQNGRADLVF 305 (340)
T ss_dssp HHHHHHHHTTCCEEEEEC--CCSSCCCCCCCTTTTHHHHHHHHHHT-----TCCEEEESSCCCHHHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHcCCCEEEEec--CCccCCCCCCCccccHHHHHHHHHHc-----CCcEEeeCCCCCHHHHHHHHHCCCeeEEE
Confidence 332 2 289987752 1111111 11 12345566666654 37899999995 99999999999 99999
Q ss_pred EcccccCCCCHHHHH
Q 023494 253 AGSAVFGAKDYAEAI 267 (281)
Q Consensus 253 vGSaIf~a~dp~~~~ 267 (281)
+|++++..+|.-..+
T Consensus 306 iGR~~lanPdl~~ki 320 (340)
T 3gr7_A 306 LGRELLRNPYWPYAA 320 (340)
T ss_dssp ECHHHHHCTTHHHHH
T ss_pred ecHHHHhCchHHHHH
Confidence 999999777754443
No 154
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=97.50 E-value=0.001 Score=60.55 Aligned_cols=173 Identities=17% Similarity=0.164 Sum_probs=113.4
Q ss_pred HHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHc-Cc--CCCCCeeEEEEecChhhHHHHHHHcCCCEEEEccccc
Q 023494 73 GEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDAL-RP--VTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQS 149 (281)
Q Consensus 73 ~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~i-r~--~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~ 149 (281)
.+.++.+...|+|++-+|..|+ |. ..+.+... +. ..+.++.|-+--.||. .++.+.++|++.|.++.-.
T Consensus 50 p~~~e~a~~~GaD~v~lDlEh~---~~---~~~~~~~~l~a~~~~~~~~~VRv~~~d~~-di~~~ld~ga~~ImlP~V~- 121 (287)
T 2v5j_A 50 SYSAELLAGAGFDWLLIDGEHA---PN---NVQTVLTQLQAIAPYPSQPVVRPSWNDPV-QIKQLLDVGTQTLLVPMVQ- 121 (287)
T ss_dssp HHHHHHHHTSCCSEEEEESSSS---SC---CHHHHHHHHHHHTTSSSEEEEECSSSCHH-HHHHHHHTTCCEEEESCCC-
T ss_pred HHHHHHHHhCCCCEEEEeCCCc---cc---hHHHHHHHHHHHHhcCCCEEEEECCCCHH-HHHHHHhCCCCEEEeCCCC-
Confidence 3557778889999999999988 32 23333322 21 1244555543334554 5777889999999998654
Q ss_pred ccccHHHHHHHHHH-----c------------------------CCcEEEEECCCCCHHHHHHhhc--cCCEEEEEee--
Q 023494 150 STIHLHRTLNQIKD-----L------------------------GAKAGVVLNPATSLSAIECVLD--VVDLVLIMSV-- 196 (281)
Q Consensus 150 ~~~~i~~~l~~ik~-----~------------------------G~k~Glai~p~t~ie~~~~~l~--~vD~IlvmsV-- 196 (281)
+.++++++++.++. . .+.+++.|....-++.+.+++. .+|.+.+.+.
T Consensus 122 saeea~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mIEt~~av~n~deIaa~~~vD~l~iG~~DL 201 (287)
T 2v5j_A 122 NADEAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETREAMKNLPQILDVEGVDGVFIGPADL 201 (287)
T ss_dssp SHHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSHHHHHTHHHHHTSTTEEEEEECHHHH
T ss_pred CHHHHHHHHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEEEEEECcHHHHHHHHHHhCcCCCCEEEECHHHH
Confidence 34556666655431 0 1557777754445577788775 5888887543
Q ss_pred --cCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEccc
Q 023494 197 --NPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSA 256 (281)
Q Consensus 197 --~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSa 256 (281)
.-|..++...|..+.-++++.......| .+..+-.+ +++.++.+++.|++.+.+|+.
T Consensus 202 s~~lg~~~~~~~p~v~~a~~~iv~aaraaG--~~~gv~~~-d~~~a~~~~~~G~~~~s~~~d 260 (287)
T 2v5j_A 202 SADMGYAGNPQHPEVQAAIEQAIVQIRESG--KAPGILIA-NEQLAKRYLELGALFVAVGVD 260 (287)
T ss_dssp HHHTTSTTCCCSHHHHHHHHHHHHHHHHTT--SEEEEECC-CHHHHHHHHHTTCSEEEEEEH
T ss_pred HHHhCCCCCCCCHHHHHHHHHHHHHHHHcC--CeeEEecC-CHHHHHHHHHhCCCEEEECcH
Confidence 4566667777887777777766666554 44444333 788888999999999999965
No 155
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=97.50 E-value=0.0021 Score=60.03 Aligned_cols=125 Identities=14% Similarity=0.230 Sum_probs=81.1
Q ss_pred HHHHHHHc--CCCEEEEcccccccccHHHHHHHHHHc--CCcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCCC--
Q 023494 130 RVPDFIKA--GADIVSVHCEQSSTIHLHRTLNQIKDL--GAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGG-- 202 (281)
Q Consensus 130 ~i~~~~~a--GAd~Itvh~Ea~~~~~i~~~l~~ik~~--G~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~G-- 202 (281)
.++.+.+. |++.+.+|..........+.++++|+. ++.+++-. -+..+..+...+ .+|.|.+ +..||...
T Consensus 122 ~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~~~~~~vi~g~--v~t~e~A~~a~~aGaD~I~v-~~g~G~~~~~ 198 (351)
T 2c6q_A 122 QLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGN--VVTGEMVEELILSGADIIKV-GIGPGSVCTT 198 (351)
T ss_dssp HHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHHCTTSEEEEEE--ECSHHHHHHHHHTTCSEEEE-CSSCSTTBCH
T ss_pred HHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCeEEEEe--CCCHHHHHHHHHhCCCEEEE-CCCCCcCcCc
Confidence 45556676 999999985321123456788888887 66665421 134666666655 4999966 55565311
Q ss_pred C---ccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccC
Q 023494 203 Q---SFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFG 259 (281)
Q Consensus 203 Q---~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~ 259 (281)
. .+-...+.-+.++.+..+. .++++..||||. ...+.+++.+|||.+.+|+.+..
T Consensus 199 r~~~g~~~p~~~~l~~v~~~~~~--~~ipvIa~GGI~~g~di~kAlalGA~~V~vG~~fl~ 257 (351)
T 2c6q_A 199 RKKTGVGYPQLSAVMECADAAHG--LKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAG 257 (351)
T ss_dssp HHHHCBCCCHHHHHHHHHHHHHH--TTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTT
T ss_pred cccCCCCccHHHHHHHHHHHHhh--cCCcEEEeCCCCCHHHHHHHHHcCCCceeccHHHhc
Confidence 0 0111134444555554433 247899999999 88999999999999999999863
No 156
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=97.50 E-value=0.00054 Score=64.63 Aligned_cols=126 Identities=15% Similarity=0.140 Sum_probs=80.9
Q ss_pred HHHcCCCEEEEccccc--------cc-----c-----------cHHHHHHHHHHc-CC-cEEEEECCCC---------CH
Q 023494 134 FIKAGADIVSVHCEQS--------ST-----I-----------HLHRTLNQIKDL-GA-KAGVVLNPAT---------SL 178 (281)
Q Consensus 134 ~~~aGAd~Itvh~Ea~--------~~-----~-----------~i~~~l~~ik~~-G~-k~Glai~p~t---------~i 178 (281)
+.++|+|.|-+|.-.. +. + -+.++++++|+. |. .+++-+++.. +.
T Consensus 175 a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~~~~~~~~~ 254 (377)
T 2r14_A 175 AKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELFGLTDDEPE 254 (377)
T ss_dssp HHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCTTCCCSCHH
T ss_pred HHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccCCCCCCCCH
Confidence 4678999999996420 00 0 156778888874 43 7999888752 23
Q ss_pred HHHHHhhc-----cCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcC-CcEEE
Q 023494 179 SAIECVLD-----VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAG-ANALV 252 (281)
Q Consensus 179 e~~~~~l~-----~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aG-AD~~V 252 (281)
+...+++. .+|+|-+.. |...+......++.++++|+.. +++|.+-|||+++.+.++++.| ||.+.
T Consensus 255 ~~~~~la~~le~~Gvd~i~v~~---~~~~~~~~~~~~~~~~~ik~~~-----~iPvi~~Ggi~~~~a~~~l~~g~aD~V~ 326 (377)
T 2r14_A 255 AMAFYLAGELDRRGLAYLHFNE---PDWIGGDITYPEGFREQMRQRF-----KGGLIYCGNYDAGRAQARLDDNTADAVA 326 (377)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEC---CC------CCCTTHHHHHHHHC-----CSEEEEESSCCHHHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeC---CcccCCCCcchHHHHHHHHHHC-----CCCEEEECCCCHHHHHHHHHCCCceEEe
Confidence 33333322 389987643 2111110000133455555543 4689899999999999999998 99999
Q ss_pred EcccccCCCCHHHHH
Q 023494 253 AGSAVFGAKDYAEAI 267 (281)
Q Consensus 253 vGSaIf~a~dp~~~~ 267 (281)
+||+++..++.-..+
T Consensus 327 igR~~l~~P~l~~k~ 341 (377)
T 2r14_A 327 FGRPFIANPDLPERF 341 (377)
T ss_dssp ESHHHHHCTTHHHHH
T ss_pred ecHHHHhCchHHHHH
Confidence 999999877765444
No 157
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=97.49 E-value=0.00061 Score=63.28 Aligned_cols=186 Identities=13% Similarity=0.138 Sum_probs=114.9
Q ss_pred CHHHHHH-HHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCc------C-CCCCeeEEEEecChhhHHHHHHHcCCCEE
Q 023494 71 KLGEQVK-AVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRP------V-TDLPLDVHLMIVEPEQRVPDFIKAGADIV 142 (281)
Q Consensus 71 ~l~~~l~-~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~------~-t~~~idaHLmv~dp~~~i~~~~~aGAd~I 142 (281)
+..+.++ .|.+.|+++|++ |.|+.+ ....+.++++++ . ++..+.+ ++.+ .+.++.+.++|+|.|
T Consensus 42 ~k~~i~~~~L~~~Gv~~IE~----g~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~i~~--l~~~-~~~i~~a~~~g~~~v 113 (337)
T 3ble_A 42 EKLNIAKFLLQKLNVDRVEI----ASARVS-KGELETVQKIMEWAATEQLTERIEILG--FVDG-NKTVDWIKDSGAKVL 113 (337)
T ss_dssp HHHHHHHHHHHTTCCSEEEE----EETTSC-TTHHHHHHHHHHHHHHTTCGGGEEEEE--ESST-THHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHcCCCEEEE----eCCCCC-hhHHHHHHHHHhhhhhhccCCCCeEEE--Eccc-hhhHHHHHHCCCCEE
Confidence 3345566 788899999988 544321 122377877765 2 2223333 2332 237888999999999
Q ss_pred EEcccccc--------------cccHHHHHHHHHHcCCcEEEEECC-----CCCHHHHHHhhc-----cCCEEEEEeecC
Q 023494 143 SVHCEQSS--------------TIHLHRTLNQIKDLGAKAGVVLNP-----ATSLSAIECVLD-----VVDLVLIMSVNP 198 (281)
Q Consensus 143 tvh~Ea~~--------------~~~i~~~l~~ik~~G~k~Glai~p-----~t~ie~~~~~l~-----~vD~IlvmsV~p 198 (281)
.+-..... .+.+.+.++.+|+.|+++.+.+.. .++.+.+.++++ .+|.|.+-
T Consensus 114 ~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~---- 189 (337)
T 3ble_A 114 NLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKEHIERIFLP---- 189 (337)
T ss_dssp EEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTSCCSEEEEE----
T ss_pred EEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHHHcCCCEEEEe----
Confidence 88764311 134667888899999999887643 234554444433 27877653
Q ss_pred CCCCCccchhHHHHHHHHHHHhhhcCCCCeEEE----ecCCChhcHHHHHHcCCcEEEEc-ccc---cCCCCHHHHHHHH
Q 023494 199 GFGGQSFIESQVKKISDLRRMCLEKGVNPWIEV----DGGVGPKNAYKVIEAGANALVAG-SAV---FGAKDYAEAIKGI 270 (281)
Q Consensus 199 G~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~V----DGGI~~e~i~~~~~aGAD~~VvG-SaI---f~a~dp~~~~~~l 270 (281)
-..|-....++.+.++.+++.++ +.+|.+ |-|....|.-..+++||+.|=.- ..+ .++.+.++.+..|
T Consensus 190 DT~G~~~P~~v~~lv~~l~~~~p----~~~i~~H~Hnd~GlA~AN~laAv~aGa~~vd~tv~GlG~~aGN~~~E~lv~~L 265 (337)
T 3ble_A 190 DTLGVLSPEETFQGVDSLIQKYP----DIHFEFHGHNDYDLSVANSLQAIRAGVKGLHASINGLGERAGNTPLEALVTTI 265 (337)
T ss_dssp CTTCCCCHHHHHHHHHHHHHHCT----TSCEEEECBCTTSCHHHHHHHHHHTTCSEEEEBGGGCSSTTCBCBHHHHHHHH
T ss_pred cCCCCcCHHHHHHHHHHHHHhcC----CCeEEEEecCCcchHHHHHHHHHHhCCCEEEEecccccccccchhHHHHHHHH
Confidence 22343333445666777777653 356777 78999999999999999977432 111 2234555555555
Q ss_pred HH
Q 023494 271 KT 272 (281)
Q Consensus 271 ~~ 272 (281)
+.
T Consensus 266 ~~ 267 (337)
T 3ble_A 266 HD 267 (337)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 158
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=97.49 E-value=0.00042 Score=63.48 Aligned_cols=89 Identities=17% Similarity=0.265 Sum_probs=63.6
Q ss_pred HHHHHHHHHHc--CCcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEE
Q 023494 154 LHRTLNQIKDL--GAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIE 230 (281)
Q Consensus 154 i~~~l~~ik~~--G~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~ 230 (281)
+.+.++.+|+. ..++-+... | ++++++.+. .+|.|++ + .|.|+ .++++.++++. ++.++
T Consensus 194 i~~Av~~ar~~~p~~kIeVEv~--t-l~e~~eAl~aGaDiImL-------D--n~s~~---~l~~av~~~~~---~v~le 255 (300)
T 3l0g_A 194 ITLAIQRLRKNLKNEYIAIECD--N-ISQVEESLSNNVDMILL-------D--NMSIS---EIKKAVDIVNG---KSVLE 255 (300)
T ss_dssp HHHHHHHHHHHSSSCCEEEEES--S-HHHHHHHHHTTCSEEEE-------E--SCCHH---HHHHHHHHHTT---SSEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEEC--C-HHHHHHHHHcCCCEEEE-------C--CCCHH---HHHHHHHhhcC---ceEEE
Confidence 66778888875 455555553 3 566666554 5998876 1 25454 44555555543 58999
Q ss_pred EecCCChhcHHHHHHcCCcEEEEcccccCC
Q 023494 231 VDGGVGPKNAYKVIEAGANALVAGSAVFGA 260 (281)
Q Consensus 231 VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a 260 (281)
+.||||++|+.++.+.|+|++.+|+...++
T Consensus 256 aSGGIt~~~i~~~A~tGVD~IsvGalthsa 285 (300)
T 3l0g_A 256 VSGCVNIRNVRNIALTGVDYISIGCITNSF 285 (300)
T ss_dssp EESSCCTTTHHHHHTTTCSEEECGGGTSSC
T ss_pred EECCCCHHHHHHHHHcCCCEEEeCccccCC
Confidence 999999999999999999999999766543
No 159
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=97.47 E-value=0.0014 Score=62.22 Aligned_cols=49 Identities=18% Similarity=0.325 Sum_probs=38.0
Q ss_pred hHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccC
Q 023494 208 SQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFG 259 (281)
Q Consensus 208 ~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~ 259 (281)
.+++-|.++++.+.. +++|.+||||. .+.+.+++..|||.+.+|++++.
T Consensus 292 ~~~~~l~~v~~av~~---~ipVia~GGI~~g~Dv~kalalGAd~V~iGr~~l~ 341 (392)
T 2nzl_A 292 ATIDVLPEIVEAVEG---KVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVW 341 (392)
T ss_dssp CHHHHHHHHHHHHTT---SSEEEECSSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred ChHHHHHHHHHHcCC---CCEEEEECCCCCHHHHHHHHHhCCCeeEECHHHHH
Confidence 345556666655432 47899999999 77899999999999999998654
No 160
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=97.46 E-value=0.00053 Score=64.25 Aligned_cols=127 Identities=15% Similarity=0.094 Sum_probs=81.5
Q ss_pred HHHcCCCEEEEccccc--------c------------cc----cHHHHHHHHHHc-C--CcEEEEECCC-------CCHH
Q 023494 134 FIKAGADIVSVHCEQS--------S------------TI----HLHRTLNQIKDL-G--AKAGVVLNPA-------TSLS 179 (281)
Q Consensus 134 ~~~aGAd~Itvh~Ea~--------~------------~~----~i~~~l~~ik~~-G--~k~Glai~p~-------t~ie 179 (281)
+.++|.|.|-+|.-.. + .+ -+.++++++|+. | ..+++=++|. .+.+
T Consensus 167 a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~ 246 (363)
T 3l5l_A 167 ARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRDEQTLE 246 (363)
T ss_dssp HHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHH
T ss_pred HHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCCCCCCHH
Confidence 4578999999996420 0 00 145788888875 3 4588877764 2233
Q ss_pred HHHHhh----c-cCCEEEEEeecCCCCC-C--ccch-hHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-C
Q 023494 180 AIECVL----D-VVDLVLIMSVNPGFGG-Q--SFIE-SQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-A 248 (281)
Q Consensus 180 ~~~~~l----~-~vD~IlvmsV~pG~~G-Q--~f~~-~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-A 248 (281)
...+++ + .+|+|-+..- +... + +..+ ..++-++++|+.. +++|.+.|||+ ++.+.++++.| |
T Consensus 247 ~~~~la~~L~~~Gvd~i~vs~g--~~~~~~~~~~~~~~~~~~~~~ir~~~-----~iPVi~~GgI~s~e~a~~~l~~G~a 319 (363)
T 3l5l_A 247 ESIELARRFKAGGLDLLSVSVG--FTIPDTNIPWGPAFMGPIAERVRREA-----KLPVTSAWGFGTPQLAEAALQANQL 319 (363)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEC--CCSSCCCCCCCTTTTHHHHHHHHHHH-----TCCEEECSSTTSHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHcCCCEEEEecC--ccccccccCCCcchhHHHHHHHHHHc-----CCcEEEeCCCCCHHHHHHHHHCCCc
Confidence 333332 2 2899877532 1111 1 0111 2344556666654 36899999995 99999999999 9
Q ss_pred cEEEEcccccCCCCHHHHH
Q 023494 249 NALVAGSAVFGAKDYAEAI 267 (281)
Q Consensus 249 D~~VvGSaIf~a~dp~~~~ 267 (281)
|.+.+||+++..+|....+
T Consensus 320 D~V~iGR~~lanPdl~~k~ 338 (363)
T 3l5l_A 320 DLVSVGRAHLADPHWAYFA 338 (363)
T ss_dssp SEEECCHHHHHCTTHHHHH
T ss_pred cEEEecHHHHhCchHHHHH
Confidence 9999999999877755444
No 161
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=97.43 E-value=0.001 Score=62.36 Aligned_cols=126 Identities=15% Similarity=0.211 Sum_probs=81.6
Q ss_pred HHHcCCCEEEEccccc--------cc-----c-----------cHHHHHHHHHHc-CC-cEEEEECCCC----------C
Q 023494 134 FIKAGADIVSVHCEQS--------ST-----I-----------HLHRTLNQIKDL-GA-KAGVVLNPAT----------S 177 (281)
Q Consensus 134 ~~~aGAd~Itvh~Ea~--------~~-----~-----------~i~~~l~~ik~~-G~-k~Glai~p~t----------~ 177 (281)
+.++|+|.|-+|.-.. +. + -+.++++++|+. |- .+++=|++.. +
T Consensus 170 a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~~~~~~~~~ 249 (364)
T 1vyr_A 170 AREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDNGPNE 249 (364)
T ss_dssp HHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBTTBCCCTTH
T ss_pred HHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEccccccccccCCCCC
Confidence 4678999999997420 00 0 256778888874 32 6888777752 2
Q ss_pred HHHHHHh---hc--cCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcC-CcEE
Q 023494 178 LSAIECV---LD--VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAG-ANAL 251 (281)
Q Consensus 178 ie~~~~~---l~--~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aG-AD~~ 251 (281)
.+...++ ++ .+|+|-+... ++.+.+ +..++.++++|+.. +++|.+-|||+++.+.++++.| ||.+
T Consensus 250 ~~~~~~~a~~l~~~G~d~i~v~~~--~~~~~~--~~~~~~~~~v~~~~-----~iPvi~~Ggit~~~a~~~l~~g~aD~V 320 (364)
T 1vyr_A 250 EADALYLIEELAKRGIAYLHMSET--DLAGGK--PYSEAFRQKVRERF-----HGVIIGAGAYTAEKAEDLIGKGLIDAV 320 (364)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECC--BTTBCC--CCCHHHHHHHHHHC-----CSEEEEESSCCHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHHHHHhCCCEEEEecC--cccCCC--cccHHHHHHHHHHC-----CCCEEEECCcCHHHHHHHHHCCCccEE
Confidence 2332222 22 3899877531 111111 11234455666553 4689999999999999999998 9999
Q ss_pred EEcccccCCCCHHHHHH
Q 023494 252 VAGSAVFGAKDYAEAIK 268 (281)
Q Consensus 252 VvGSaIf~a~dp~~~~~ 268 (281)
.+||+++..++....++
T Consensus 321 ~~gR~~l~~P~~~~~~~ 337 (364)
T 1vyr_A 321 AFGRDYIANPDLVARLQ 337 (364)
T ss_dssp EESHHHHHCTTHHHHHH
T ss_pred EECHHHHhChhHHHHHH
Confidence 99999998777654443
No 162
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=97.41 E-value=0.002 Score=59.64 Aligned_cols=145 Identities=16% Similarity=0.202 Sum_probs=89.6
Q ss_pred HHHHHcCcCCCCCeeEEEEecChh--hHHHHHHHcC--CCEEEEcccccccccHHHHHHHHHHc--CCcEEEEECCCCCH
Q 023494 105 LVVDALRPVTDLPLDVHLMIVEPE--QRVPDFIKAG--ADIVSVHCEQSSTIHLHRTLNQIKDL--GAKAGVVLNPATSL 178 (281)
Q Consensus 105 ~~I~~ir~~t~~~idaHLmv~dp~--~~i~~~~~aG--Ad~Itvh~Ea~~~~~i~~~l~~ik~~--G~k~Glai~p~t~i 178 (281)
.+++++++ .+.++-+.+. .++. +..+.+.++| ++++.++.-........+.++++++. +..+..- + -+..
T Consensus 85 ~~i~~~~~-~g~~v~v~~g-~~~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~~~~~vi~G-~-v~s~ 160 (336)
T 1ypf_A 85 SFIRDMQS-RGLIASISVG-VKEDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHLPESFVIAG-N-VGTP 160 (336)
T ss_dssp HHHHHHHH-TTCCCEEEEC-CSHHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHCTTSEEEEE-E-ECSH
T ss_pred HHHHHHHh-cCCeEEEeCC-CCHHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhCCCCEEEEC-C-cCCH
Confidence 44555544 3456666643 2333 3456678889 99998864211123355778888876 4444322 1 1346
Q ss_pred HHHHHhhc-cCCEEEEEeecCCCCC-Cc----c-ch-hHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCc
Q 023494 179 SAIECVLD-VVDLVLIMSVNPGFGG-QS----F-IE-SQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGAN 249 (281)
Q Consensus 179 e~~~~~l~-~vD~IlvmsV~pG~~G-Q~----f-~~-~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD 249 (281)
+..+.+.+ .+|.|.+ +.++|..- +. + .| .+++-|.++++.. +++|..||||. .+.+.+++.+|||
T Consensus 161 e~A~~a~~aGad~Ivv-s~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~-----~ipVIa~GGI~~g~Dv~kalalGAd 234 (336)
T 1ypf_A 161 EAVRELENAGADATKV-GIGPGKVCITKIKTGFGTGGWQLAALRWCAKAA-----SKPIIADGGIRTNGDVAKSIRFGAT 234 (336)
T ss_dssp HHHHHHHHHTCSEEEE-CSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTC-----SSCEEEESCCCSTHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEE-ecCCCceeecccccCcCCchhHHHHHHHHHHHc-----CCcEEEeCCCCCHHHHHHHHHcCCC
Confidence 66766665 4999977 44554210 00 0 00 0345555555432 57899999998 7899999999999
Q ss_pred EEEEcccccC
Q 023494 250 ALVAGSAVFG 259 (281)
Q Consensus 250 ~~VvGSaIf~ 259 (281)
.+.+|++++.
T Consensus 235 aV~iGr~~l~ 244 (336)
T 1ypf_A 235 MVMIGSLFAG 244 (336)
T ss_dssp EEEESGGGTT
T ss_pred EEEeChhhhc
Confidence 9999999873
No 163
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=97.40 E-value=0.0015 Score=61.15 Aligned_cols=135 Identities=14% Similarity=0.212 Sum_probs=86.8
Q ss_pred cCccCHHHHHHHHHHcCCCeEEEEeeeCccc-------------c------c-------------------ccCCHHHHH
Q 023494 67 ANFAKLGEQVKAVELAGCDWIHVDVMDGRFV-------------P------N-------------------ITIGPLVVD 108 (281)
Q Consensus 67 ~D~~~l~~~l~~l~~~G~d~iHiDImDG~fv-------------p------n-------------------~~~G~~~I~ 108 (281)
-|-...++.+++++++|++.|-++| |.... | | -.+..+.++
T Consensus 132 ~d~~~~~~l~~ra~~aG~~alvlTv-D~p~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~w~~i~ 210 (352)
T 3sgz_A 132 SDWDFNKQMVQRAEALGFKALVITI-DTPVLGNRRRDKRNQLNLEANILKAALRALKEEKPTQSVPVLFPKASFCWNDLS 210 (352)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEEC-SCSSCCCCHHHHHHHHHSCHHHHTTCC---------------CCCTTCCHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEe-CCCCCCcchhhhhcCCCCCcccchhhhcccccccccchhhhhccCCCCCHHHHH
Confidence 3555667788999999999887653 32111 1 1 123346677
Q ss_pred HcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccC
Q 023494 109 ALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVV 188 (281)
Q Consensus 109 ~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~v 188 (281)
.+|+.++.|+.+-.. .++ +....+.++|+|.|+++..-. . . .
T Consensus 211 ~lr~~~~~PvivK~v-~~~-e~A~~a~~~GaD~I~vsn~GG-~-------------------------~----------~ 252 (352)
T 3sgz_A 211 LLQSITRLPIILKGI-LTK-EDAELAMKHNVQGIVVSNHGG-R-------------------------Q----------L 252 (352)
T ss_dssp HHHHHCCSCEEEEEE-CSH-HHHHHHHHTTCSEEEECCGGG-T-------------------------S----------S
T ss_pred HHHHhcCCCEEEEec-CcH-HHHHHHHHcCCCEEEEeCCCC-C-------------------------c----------c
Confidence 777777777776442 333 345667778888887764310 0 0 0
Q ss_pred CEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEccccc
Q 023494 189 DLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVF 258 (281)
Q Consensus 189 D~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf 258 (281)
| ++ +.+++-|.++++.+.. +++|.+||||. .+.+.+++.+|||.+.+|++++
T Consensus 253 d-----------~~----~~~~~~L~~i~~av~~---~ipVia~GGI~~g~Dv~kaLalGA~aV~iGr~~l 305 (352)
T 3sgz_A 253 D-----------EV----SASIDALREVVAAVKG---KIEVYMDGGVRTGTDVLKALALGARCIFLGRPIL 305 (352)
T ss_dssp C-----------SS----CCHHHHHHHHHHHHTT---SSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred C-----------CC----ccHHHHHHHHHHHhCC---CCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHH
Confidence 1 11 2345556666555432 47899999998 7788899999999999999865
No 164
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=97.40 E-value=0.00025 Score=64.95 Aligned_cols=90 Identities=14% Similarity=0.240 Sum_probs=63.2
Q ss_pred cHHHHHHHHHHcC--CcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeE
Q 023494 153 HLHRTLNQIKDLG--AKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWI 229 (281)
Q Consensus 153 ~i~~~l~~ik~~G--~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I 229 (281)
++.+.++.+|+.. .++++... .++.+++.+. .+|+|.+- . +.+ +.++++++.++. +++|
T Consensus 194 ti~~ai~~~r~~~~~~kI~vev~---tlee~~eA~~aGaD~I~ld---~------~~~---e~l~~~v~~~~~---~~~I 255 (296)
T 1qap_A 194 SVRQAVEKAFWLHPDVPVEVEVE---NLDELDDALKAGADIIMLD---N------FNT---DQMREAVKRVNG---QARL 255 (296)
T ss_dssp SHHHHHHHHHHHSTTSCEEEEES---SHHHHHHHHHTTCSEEEES---S------CCH---HHHHHHHHTTCT---TCCE
T ss_pred CHHHHHHHHHHhCCCCcEEEEeC---CHHHHHHHHHcCCCEEEEC---C------CCH---HHHHHHHHHhCC---CCeE
Confidence 3567777777753 26777664 2355555444 58999762 1 333 444555555432 4789
Q ss_pred EEecCCChhcHHHHHHcCCcEEEEcccccCC
Q 023494 230 EVDGGVGPKNAYKVIEAGANALVAGSAVFGA 260 (281)
Q Consensus 230 ~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a 260 (281)
++.|||+++|+.++.++|+|.+.+|+.++++
T Consensus 256 ~ASGGIt~~~i~~~a~~GvD~isvGsli~~a 286 (296)
T 1qap_A 256 EVSGNVTAETLREFAETGVDFISVGALTKHV 286 (296)
T ss_dssp EECCCSCHHHHHHHHHTTCSEEECSHHHHEE
T ss_pred EEECCCCHHHHHHHHHcCCCEEEEeHHHcCC
Confidence 9999999999999999999999999977654
No 165
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=97.38 E-value=0.0011 Score=63.83 Aligned_cols=195 Identities=19% Similarity=0.195 Sum_probs=118.3
Q ss_pred eEEEeccCccCHHHHHHHHHHcCCCeEEEEee-----eCccccc-------------cc---CCH-HHHHHcCcC-----
Q 023494 61 SPSILSANFAKLGEQVKAVELAGCDWIHVDVM-----DGRFVPN-------------IT---IGP-LVVDALRPV----- 113 (281)
Q Consensus 61 ~pSila~D~~~l~~~l~~l~~~G~d~iHiDIm-----DG~fvpn-------------~~---~G~-~~I~~ir~~----- 113 (281)
.|-.+++=+.+..+.++.+.+.|...+.+--. .|+--|. +. .|. .+++.+++.
T Consensus 93 NPvglAAG~dk~~~~~~~l~~~GfG~v~~gtvT~~pq~GNp~PR~~rl~e~~~iiN~~GfnN~G~~~~~~~l~~~~~~~~ 172 (443)
T 1tv5_A 93 NPFGVAAGFDKNGVCIDSILKLGFSFIEIGTITPRGQTGNAKPRIFRDVESRSIINSCGFNNMGCDKVTENLILFRKRQE 172 (443)
T ss_dssp SSEEECTTTTTTCSSHHHHHTTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCSCBSCHHHHHHHHHHHHHHHH
T ss_pred CCcEECCcccCccHHHHHHHhcCCCEEEEeeeecCCCCCCCCccEEeccccceeeeccccCChhHHHHHHHHHHHhhhcc
Confidence 46777766655556677788889888877422 1211111 11 232 234444321
Q ss_pred -----CCCCeeEEEEecC-----hhhHHHHHHHc--CCCEEEEccccccc---------ccHHHHHHHHHHc--------
Q 023494 114 -----TDLPLDVHLMIVE-----PEQRVPDFIKA--GADIVSVHCEQSST---------IHLHRTLNQIKDL-------- 164 (281)
Q Consensus 114 -----t~~~idaHLmv~d-----p~~~i~~~~~a--GAd~Itvh~Ea~~~---------~~i~~~l~~ik~~-------- 164 (281)
+..++-+.+.-++ +..|.+.+..+ ++|+|.+..-+..+ +.+.++++.+++.
T Consensus 173 ~~~~~~~~~vgvni~~~~~~~~~~~dy~~~a~~l~~~aD~ieiNiscPnt~Glr~lq~~~~l~~il~~v~~~~~~~~~~~ 252 (443)
T 1tv5_A 173 EDKLLSKHIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNN 252 (443)
T ss_dssp HCSTTTTCEEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHHHC---
T ss_pred cccccCCceEEEEecCcccchHHHHHHHHHHHHHhcCCCEEEEeccCCCCcccccccCHHHHHHHHHHHHHHHhhhcccC
Confidence 2356888888776 66776654433 59999998754211 1244566666542
Q ss_pred -------------------------------------------CCc-EEEEECCCCCHHHHHHhhc-----cCCEEEEEe
Q 023494 165 -------------------------------------------GAK-AGVVLNPATSLSAIECVLD-----VVDLVLIMS 195 (281)
Q Consensus 165 -------------------------------------------G~k-~Glai~p~t~ie~~~~~l~-----~vD~Ilvms 195 (281)
.+. +.+=+.|+...+.+.++.+ .+|.|.+..
T Consensus 253 ~~~~g~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~n 332 (443)
T 1tv5_A 253 IMNDESTYNEDNKIVEKKNNFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISN 332 (443)
T ss_dssp -----------------------------------CCCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred ccccccCHHHHHHHHHHhhcccccchhhhhhhhhcchhcccCCCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEC
Confidence 344 6777888866544433322 389887642
Q ss_pred ecC----------CC---CCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEccccc
Q 023494 196 VNP----------GF---GGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVF 258 (281)
Q Consensus 196 V~p----------G~---~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf 258 (281)
.-. +. .|....|..++-++++++... .+++|...|||. .+.+.+++.+|||.+-+||+++
T Consensus 333 tt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~---~~iPVIg~GGI~s~~DA~e~l~aGAd~Vqigrall 406 (443)
T 1tv5_A 333 TTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTN---KQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLV 406 (443)
T ss_dssp CBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTT---TCSCEEEESSCCSHHHHHHHHHTTEEEEEESHHHH
T ss_pred CCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcC---CCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHH
Confidence 110 11 122223445677777777653 258899999998 8899999999999999999954
No 166
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=97.36 E-value=0.00086 Score=61.43 Aligned_cols=90 Identities=19% Similarity=0.255 Sum_probs=62.7
Q ss_pred cHHHHHHHHHHc--CCcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeE
Q 023494 153 HLHRTLNQIKDL--GAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWI 229 (281)
Q Consensus 153 ~i~~~l~~ik~~--G~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I 229 (281)
.+.+.++.+|+. +.++.+.+. .++.+++.+. .+|+|++= .|.++. ++++.+.+. .+++|
T Consensus 195 ~i~~Av~~~r~~~p~~~ieVEvd---tlde~~eAl~aGaD~I~LD---------n~~~~~---l~~av~~i~---~~v~i 256 (298)
T 3gnn_A 195 GVGEALDAAFALNAEVPVQIEVE---TLDQLRTALAHGARSVLLD---------NFTLDM---MRDAVRVTE---GRAVL 256 (298)
T ss_dssp CHHHHHHHHHHHC--CCCEEEES---SHHHHHHHHHTTCEEEEEE---------SCCHHH---HHHHHHHHT---TSEEE
T ss_pred CHHHHHHHHHHhCCCCCEEEEeC---CHHHHHHHHHcCCCEEEEC---------CCCHHH---HHHHHHHhC---CCCeE
Confidence 366788888876 456666653 3455555544 58988762 144443 444444442 25889
Q ss_pred EEecCCChhcHHHHHHcCCcEEEEcccccCC
Q 023494 230 EVDGGVGPKNAYKVIEAGANALVAGSAVFGA 260 (281)
Q Consensus 230 ~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a 260 (281)
++.||||++|+.++.+.|+|++.+|+...++
T Consensus 257 eaSGGI~~~~i~~~a~tGVD~isvG~lt~sa 287 (298)
T 3gnn_A 257 EVSGGVNFDTVRAIAETGVDRISIGALTKDV 287 (298)
T ss_dssp EEESSCSTTTHHHHHHTTCSEEECGGGGTSC
T ss_pred EEEcCCCHHHHHHHHHcCCCEEEECCeecCC
Confidence 9999999999999999999999999977654
No 167
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=97.36 E-value=0.00042 Score=63.16 Aligned_cols=89 Identities=15% Similarity=0.262 Sum_probs=64.0
Q ss_pred cHHHHHHHHHHcC--CcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeE
Q 023494 153 HLHRTLNQIKDLG--AKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWI 229 (281)
Q Consensus 153 ~i~~~l~~ik~~G--~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I 229 (281)
.+.+.++.+|+.+ .++.+... .++++++.+. .+|+|++= .|.++ .++++.+.++. +++|
T Consensus 184 ~i~~Av~~ar~~~~~~~IeVEv~---tl~ea~eAl~aGaD~I~LD---------n~~~~---~l~~av~~~~~---~v~i 245 (287)
T 3tqv_A 184 GIAKAVTKAKKLDSNKVVEVEVT---NLDELNQAIAAKADIVMLD---------NFSGE---DIDIAVSIARG---KVAL 245 (287)
T ss_dssp CHHHHHHHHHHHCTTSCEEEEES---SHHHHHHHHHTTCSEEEEE---------SCCHH---HHHHHHHHHTT---TCEE
T ss_pred CHHHHHHHHHhhCCCCcEEEEeC---CHHHHHHHHHcCCCEEEEc---------CCCHH---HHHHHHHhhcC---CceE
Confidence 3677888888764 66666553 3466666554 59999872 14444 44555555532 5899
Q ss_pred EEecCCChhcHHHHHHcCCcEEEEcccccC
Q 023494 230 EVDGGVGPKNAYKVIEAGANALVAGSAVFG 259 (281)
Q Consensus 230 ~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~ 259 (281)
++.||||++|++++.+.|+|++.+|+.+-+
T Consensus 246 eaSGGIt~~~i~~~a~tGVD~IsvGalt~s 275 (287)
T 3tqv_A 246 EVSGNIDRNSIVAIAKTGVDFISVGAITKH 275 (287)
T ss_dssp EEESSCCTTTHHHHHTTTCSEEECSHHHHS
T ss_pred EEECCCCHHHHHHHHHcCCCEEEEChhhcC
Confidence 999999999999999999999999976644
No 168
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=97.35 E-value=0.001 Score=62.52 Aligned_cols=141 Identities=15% Similarity=0.122 Sum_probs=85.5
Q ss_pred CCCCCeeEEEEecChhh-HHHHHHHcCCCEEEEccccc----------ccccHHHHHHHHHHc-CCcEEEE-ECCCCCHH
Q 023494 113 VTDLPLDVHLMIVEPEQ-RVPDFIKAGADIVSVHCEQS----------STIHLHRTLNQIKDL-GAKAGVV-LNPATSLS 179 (281)
Q Consensus 113 ~t~~~idaHLmv~dp~~-~i~~~~~aGAd~Itvh~Ea~----------~~~~i~~~l~~ik~~-G~k~Gla-i~p~t~ie 179 (281)
.++.++.+.+-...+.. +.+..-.+|||.+.+|.... ...++.+.++++++. ++.+.+- +.-....+
T Consensus 142 ~P~~~~ianig~~~~~e~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK~vg~g~s~e 221 (365)
T 3sr7_A 142 RPHLLLATNIGLDKPYQAGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKLQLPFILKEVGFGMDVK 221 (365)
T ss_dssp ---CCEEEEEETTSCHHHHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHCCSCEEEEECSSCCCHH
T ss_pred CCCCcEEEEeCCCCCHHHHHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhhCCCEEEEECCCCCCHH
Confidence 36788888887765554 34444578999999995421 011344677787765 6666665 32224556
Q ss_pred HHHHhhc-cCCEEEEEeecCCCCC-C-------------ccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHH
Q 023494 180 AIECVLD-VVDLVLIMSVNPGFGG-Q-------------SFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKV 243 (281)
Q Consensus 180 ~~~~~l~-~vD~IlvmsV~pG~~G-Q-------------~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~ 243 (281)
..+.+.+ .+|.|.+- -+.|..- | .|-..+..-|.+++.. ..+++|.+||||. ...+.++
T Consensus 222 ~A~~l~~aGad~I~V~-g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v~~~----~~~ipvia~GGI~~g~Dv~Ka 296 (365)
T 3sr7_A 222 TIQTAIDLGVKTVDIS-GRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLLNAQPL----MDKVEILASGGIRHPLDIIKA 296 (365)
T ss_dssp HHHHHHHHTCCEEECC-CBC--------------CGGGTTCSCBHHHHHHHHGGG----TTTSEEEECSSCCSHHHHHHH
T ss_pred HHHHHHHcCCCEEEEe-CCCCcccchhhccccccccccccccccHHHHHHHHHHh----cCCCeEEEeCCCCCHHHHHHH
Confidence 6666655 48999763 2222110 0 1111223344443322 2257899999998 7788888
Q ss_pred HHcCCcEEEEccccc
Q 023494 244 IEAGANALVAGSAVF 258 (281)
Q Consensus 244 ~~aGAD~~VvGSaIf 258 (281)
+.+|||.+-+|++++
T Consensus 297 LalGAdaV~ig~~~l 311 (365)
T 3sr7_A 297 LVLGAKAVGLSRTML 311 (365)
T ss_dssp HHHTCSEEEESHHHH
T ss_pred HHcCCCEEEECHHHH
Confidence 999999999999876
No 169
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=97.35 E-value=0.011 Score=56.91 Aligned_cols=182 Identities=22% Similarity=0.253 Sum_probs=105.7
Q ss_pred cCHHHHHHHHHHcCCCeEEEEeee--CcccccccCCHHHHHHcCcC-----CCCCeeEEEEec---ChhhHHHHHHHcCC
Q 023494 70 AKLGEQVKAVELAGCDWIHVDVMD--GRFVPNITIGPLVVDALRPV-----TDLPLDVHLMIV---EPEQRVPDFIKAGA 139 (281)
Q Consensus 70 ~~l~~~l~~l~~~G~d~iHiDImD--G~fvpn~~~G~~~I~~ir~~-----t~~~idaHLmv~---dp~~~i~~~~~aGA 139 (281)
..+.+.++.+.+.++..+.| .| |.++=.++. .++++.+.+. ....+.+-..+. +-.+.++.+.++|+
T Consensus 170 ~~l~~a~~~m~~~~~~~lpV--Vd~~g~lvGivt~-~Dil~~~~~~~~~~d~~~~~~vg~~i~~~~~~~~~a~~l~~~G~ 246 (491)
T 1zfj_A 170 TDLETAERILHEHRIEKLPL--VDNSGRLSGLITI-KDIEKVIEFPHAAKDEFGRLLVAAAVGVTSDTFERAEALFEAGA 246 (491)
T ss_dssp CCHHHHHHHHHHTTCSEEEE--ECTTSBEEEEEEH-HHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHcCCCEEEE--EcCCCcEEEEEEH-HHHHHHHhccccccCcCCcEEEEEeccCchhHHHHHHHHHHcCC
Confidence 47899999999999888764 44 322221222 3445554420 111222222332 12345777889999
Q ss_pred CEEEEcccccccccHHHHHHHHHHc--CCcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCC-CC----ccchhHHH
Q 023494 140 DIVSVHCEQSSTIHLHRTLNQIKDL--GAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFG-GQ----SFIESQVK 211 (281)
Q Consensus 140 d~Itvh~Ea~~~~~i~~~l~~ik~~--G~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~-GQ----~f~~~~l~ 211 (281)
|.+.++..........+.++++++. ++.+. .=+. ...+....+++ .+|.|.+ +..+|.- +. .+....++
T Consensus 247 d~ivi~~a~g~~~~~~~~i~~l~~~~p~~pvi-~G~v-~t~~~a~~~~~~Gad~I~v-g~g~g~~~~tr~~~~~~~p~~~ 323 (491)
T 1zfj_A 247 DAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLI-AGNI-ATAEGARALYDAGVDVVKV-GIGPGSICTTRVVAGVGVPQVT 323 (491)
T ss_dssp SEEEECCSCTTCHHHHHHHHHHHHHCSSSCEE-EEEE-CSHHHHHHHHHTTCSEEEE-CSSCCTTBCHHHHTCCCCCHHH
T ss_pred CeEEEeeecCcchhHHHHHHHHHHHCCCCcEe-CCCc-cCHHHHHHHHHcCCCEEEE-CccCCcceEEeeecCCCCCcHH
Confidence 9999997422122344566666654 33333 2111 23455555554 4899876 4444320 00 01112344
Q ss_pred HHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccC
Q 023494 212 KISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFG 259 (281)
Q Consensus 212 kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~ 259 (281)
-++++...... .+++|.+||||+ .+.+.+++++|||.+++|+++..
T Consensus 324 ~l~~~~~~~~~--~~ipvia~GGi~~~~di~kal~~GA~~v~vG~~~~~ 370 (491)
T 1zfj_A 324 AIYDAAAVARE--YGKTIIADGGIKYSGDIVKALAAGGNAVMLGSMFAG 370 (491)
T ss_dssp HHHHHHHHHHH--TTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTT
T ss_pred HHHHHHHHHhh--cCCCEEeeCCCCCHHHHHHHHHcCCcceeeCHHhhC
Confidence 45555554433 257899999998 88999999999999999999874
No 170
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=97.33 E-value=0.0032 Score=60.97 Aligned_cols=168 Identities=18% Similarity=0.212 Sum_probs=105.7
Q ss_pred HHHHHHHcCCCeEEEEeeeCccccc---c-cCCHHHHHHcCcC-CCCCeeEEEEecC-------h----hhHHHHHHHcC
Q 023494 75 QVKAVELAGCDWIHVDVMDGRFVPN---I-TIGPLVVDALRPV-TDLPLDVHLMIVE-------P----EQRVPDFIKAG 138 (281)
Q Consensus 75 ~l~~l~~~G~d~iHiDImDG~fvpn---~-~~G~~~I~~ir~~-t~~~idaHLmv~d-------p----~~~i~~~~~aG 138 (281)
.++.|.+.|+++|++--- +.|+.. + .-..+.++.+++. ++..+.+.+-..| | ..+++.+.++|
T Consensus 35 Ia~~L~~~Gv~~IE~g~~-atF~~~~r~~~~d~~e~l~~i~~~~~~~~l~~l~R~~N~~G~~~~~ddv~~~~v~~a~~~G 113 (464)
T 2nx9_A 35 IAQQLDQIGYWSLECWGG-ATFDSCIRFLGEDPWQRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADDVVDTFVERAVKNG 113 (464)
T ss_dssp GHHHHHTSCCSEEEEEET-THHHHHHHTTCCCHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEeCcC-ccccchhhccCCCHHHHHHHHHHhCCCCeEEEEeccccccCcccccchhhHHHHHHHHhCC
Confidence 345677889999888410 013221 1 1123567777663 5566665432121 1 24578888999
Q ss_pred CCEEEEcccccccccHHHHHHHHHHcCCcEEEEE----CCCCCHHHHHHhhcc-----CCEEEEEeecCCCCCCccchhH
Q 023494 139 ADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVL----NPATSLSAIECVLDV-----VDLVLIMSVNPGFGGQSFIESQ 209 (281)
Q Consensus 139 Ad~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai----~p~t~ie~~~~~l~~-----vD~IlvmsV~pG~~GQ~f~~~~ 209 (281)
+|.|.+-.-......+.+.++.+|+.|+++-..+ .+.++.+.+.++++. +|.|.+-- ..|-....++
T Consensus 114 vd~i~if~~~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~D----T~G~~~P~~v 189 (464)
T 2nx9_A 114 MDVFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIALKD----MAGILTPYAA 189 (464)
T ss_dssp CCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEEEE----TTSCCCHHHH
T ss_pred cCEEEEEEecCHHHHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEcC----CCCCcCHHHH
Confidence 9999987554335678899999999999986655 333455555554432 78776531 2232223344
Q ss_pred HHHHHHHHHHhhhcCCCCeEEE----ecCCChhcHHHHHHcCCcEEE
Q 023494 210 VKKISDLRRMCLEKGVNPWIEV----DGGVGPKNAYKVIEAGANALV 252 (281)
Q Consensus 210 l~kI~~lr~l~~~~~~~~~I~V----DGGI~~e~i~~~~~aGAD~~V 252 (281)
.+.++.+++.+ +.+|.+ |.|....|.-..+++|||.|=
T Consensus 190 ~~lv~~l~~~~-----~~~i~~H~Hnd~GlAvAN~laAv~AGa~~VD 231 (464)
T 2nx9_A 190 EELVSTLKKQV-----DVELHLHCHSTAGLADMTLLKAIEAGVDRVD 231 (464)
T ss_dssp HHHHHHHHHHC-----CSCEEEEECCTTSCHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHhc-----CCeEEEEECCCCChHHHHHHHHHHhCCCEEE
Confidence 55566666654 356776 789999999999999999763
No 171
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=97.30 E-value=0.0027 Score=59.60 Aligned_cols=49 Identities=18% Similarity=0.260 Sum_probs=38.3
Q ss_pred hHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccC
Q 023494 208 SQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFG 259 (281)
Q Consensus 208 ~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~ 259 (281)
.+++-|.++++.+.. +++|.+||||. .+.+.+++..|||.+-+|+.+..
T Consensus 269 ~~~~~l~~v~~~v~~---~ipVia~GGI~~g~D~~kalalGAd~V~iGr~~l~ 318 (368)
T 2nli_A 269 GSFDTLPAIAERVNK---RVPIVFDSGVRRGEHVAKALASGADVVALGRPVLF 318 (368)
T ss_dssp CHHHHHHHHHHHHTT---SSCEEECSSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred ChHHHHHHHHHHhCC---CCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 345666666665532 47899999999 77899999999999999988653
No 172
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=97.29 E-value=0.002 Score=60.40 Aligned_cols=49 Identities=18% Similarity=0.329 Sum_probs=39.0
Q ss_pred hHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccC
Q 023494 208 SQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFG 259 (281)
Q Consensus 208 ~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~ 259 (281)
..++-|.++++.+.. +++|..+|||+ .+++.+++.+|||.+.+|++++.
T Consensus 265 ~~~~~l~~v~~~~~~---~ipvia~GGI~~~~D~~k~l~~GAdaV~iGr~~l~ 314 (370)
T 1gox_A 265 ATIMALEEVVKAAQG---RIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVF 314 (370)
T ss_dssp CHHHHHHHHHHHTTT---SSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred cHHHHHHHHHHHhCC---CCEEEEECCCCCHHHHHHHHHcCCCEEeecHHHHH
Confidence 356666777665532 47899999997 77999999999999999998764
No 173
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=97.29 E-value=0.0048 Score=55.23 Aligned_cols=132 Identities=13% Similarity=0.230 Sum_probs=85.1
Q ss_pred HHHHHHcCCCEEEEc--------ccccccccHHHHHHHHHHcCCcEEEEECCCCCHH-------------HHHHhhccCC
Q 023494 131 VPDFIKAGADIVSVH--------CEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLS-------------AIECVLDVVD 189 (281)
Q Consensus 131 i~~~~~aGAd~Itvh--------~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie-------------~~~~~l~~vD 189 (281)
.+++.++|+++|.+. .| +++.+.+-++.+.++|+.+.+-+.- .++ .+...+..++
T Consensus 83 ~~mL~d~G~~~ViiGHSERR~~f~E--td~~V~~Kv~~Al~~GL~pIlCvGE--tleere~g~t~~vv~~Ql~~~l~~~~ 158 (254)
T 3m9y_A 83 PVALADLGVKYVVIGHSERRELFHE--TDEEINKKAHAIFKHGMTPIICVGE--TDEERESGKANDVVGEQVKKAVAGLS 158 (254)
T ss_dssp HHHHHHTTCCEEEESCHHHHHHSCC--CHHHHHHHHHHHHHTTCEEEEEECC--CHHHHHTTCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHcCCCEEEECcccccCccCC--CHHHHHHHHHHHHHCCCEEEEEcCC--cHHHHHCCCHHHHHHHHHHHHHhcCC
Confidence 578899999999985 44 2455666678889999999887752 332 2333344332
Q ss_pred -------EEEEEeecC-CCCCCccchhHHHH-HHHHHHHhhhc-----CCCCeEEEecCCChhcHHHHH-HcCCcEEEEc
Q 023494 190 -------LVLIMSVNP-GFGGQSFIESQVKK-ISDLRRMCLEK-----GVNPWIEVDGGVGPKNAYKVI-EAGANALVAG 254 (281)
Q Consensus 190 -------~IlvmsV~p-G~~GQ~f~~~~l~k-I~~lr~l~~~~-----~~~~~I~VDGGI~~e~i~~~~-~aGAD~~VvG 254 (281)
+|.+=.|.. | +|..-.|+..+. .+.+|+.+.+. ..+++|.-.|+++++|+.++. +.++|.+-+|
T Consensus 159 ~~~~~~vvIAYEPvWAIG-TG~~At~e~aqevh~~IR~~l~~~~~~~~a~~~rIlYGGSV~~~N~~~l~~~~diDG~LVG 237 (254)
T 3m9y_A 159 EDQLKSVVIAYEPIWAIG-TGKSSTSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYMAQTDIDGALVG 237 (254)
T ss_dssp HHHHHHCEEEECCGGGCC---CCCCHHHHHHHHHHHHHHHHHHSCHHHHTTSEEEECSCCCTTTHHHHHTSTTCCEEEES
T ss_pred HHHhCCEEEEECChhhhc-CCCCCCHHHHHHHHHHHHHHHHHhcChhhcCCccEEEcCCcCHHHHHHHHcCCCCCeEEee
Confidence 444422221 4 355444444333 33345544321 235789999999999999987 8899999999
Q ss_pred ccccCCCCHHHHH
Q 023494 255 SAVFGAKDYAEAI 267 (281)
Q Consensus 255 SaIf~a~dp~~~~ 267 (281)
++-.++++..+.+
T Consensus 238 gASL~~~~F~~Ii 250 (254)
T 3m9y_A 238 GASLKVEDFVQLL 250 (254)
T ss_dssp GGGSSHHHHHHHH
T ss_pred HHhhCHHHHHHHH
Confidence 9988766554443
No 174
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=97.29 E-value=0.00021 Score=82.45 Aligned_cols=153 Identities=14% Similarity=0.180 Sum_probs=94.0
Q ss_pred HHHHHcCcCC--CCCeeEEEEecChh---------hHHHHHHHcC--CCEEEEcccccccccHHHHHHHHHHcCCcEEEE
Q 023494 105 LVVDALRPVT--DLPLDVHLMIVEPE---------QRVPDFIKAG--ADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVV 171 (281)
Q Consensus 105 ~~I~~ir~~t--~~~idaHLmv~dp~---------~~i~~~~~aG--Ad~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Gla 171 (281)
+.|+.+|+.+ +.++-+-+|..||. ++++.+.+.| +|+|+++.-..+.++..++++.+|++|+++.-.
T Consensus 470 ~~i~~~r~~~~~~~p~~vNl~~~~p~~~~~~~g~~~~~~~~~~~g~~vdgv~~~aG~P~~ee~~~~i~~l~~~Gi~~i~~ 549 (3089)
T 3zen_D 470 DRIAELETLLEPGRAIQFNTLFLDPYLWKLQVGGKRLVQRARQSGAPIDGLVVSAGIPDLEEAVDIIDELNEVGISHVVF 549 (3089)
T ss_dssp HHHHHHHHHSCTTCCCEEEEECSCHHHHHHHHHHHHHHHHHHHTTCSCCEEEEESSCCCHHHHHHHHTSTTHHHHCSEEE
T ss_pred HHHHHHHHhcCCCCceeechhhcChhhhhhccCHHHHHHHHHHcCCCceEEEEeCCCCchhHhHHHHHHHHHcCCEEEEE
Confidence 4566667665 67888999999984 4677889999 888999854211345567888888888775443
Q ss_pred ECCCCCH-HHHHHhhcc-CC---EEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHH-
Q 023494 172 LNPATSL-SAIECVLDV-VD---LVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVI- 244 (281)
Q Consensus 172 i~p~t~i-e~~~~~l~~-vD---~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~- 244 (281)
.-+++.. ..+..+... .+ .|.+.+++.| |..........|-.....+.+ ..++++.+.|||. .+.+..+.
T Consensus 550 ~~~t~~~a~~~~~i~~d~~~~~y~vv~~G~eaG--GH~g~~~~~~ll~~~~~~ir~-~~~iPViaaGGI~d~~~vaaal~ 626 (3089)
T 3zen_D 550 KPGTVEQIRSVIRIAAEVPTKPVIVHIEGGRAG--GHHSWEDLDDLLLATYSELRS-RSNITICVGGGIGTPERSAEYLS 626 (3089)
T ss_dssp CCCSHHHHHHHHHHHTTSTTSCEEEEECCSSSS--EECCSCCHHHHHHHHHHHHTT-CTTEEEEEESSCCCTTTTHHHHH
T ss_pred eCCCHHHHHHHHHhhhhcCCCcEEEEEeCCCcC--CCCCcccHHHHHHHHHHHHhh-cCCCeEEEEeCCCCHHHHHHHhc
Confidence 3322222 133333222 22 3444433332 222112222333112222211 2358999999997 88998888
Q ss_pred ----------HcCCcEEEEcccccCC
Q 023494 245 ----------EAGANALVAGSAVFGA 260 (281)
Q Consensus 245 ----------~aGAD~~VvGSaIf~a 260 (281)
..|||.+++||++...
T Consensus 627 g~ws~~~~~p~lGAdGV~vGTrfl~t 652 (3089)
T 3zen_D 627 GRWAEVHGYPLMPIDGILVGTAAMAT 652 (3089)
T ss_dssp TGGGGTTTCCCCCCSEEECSSTTTTC
T ss_pred cccccccCccCCCCCEEEecHHHHhC
Confidence 9999999999997753
No 175
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=97.23 E-value=0.0041 Score=55.58 Aligned_cols=130 Identities=15% Similarity=0.246 Sum_probs=87.3
Q ss_pred HHHHHHcCCCEEEEc--------ccccccccHHHHHHHHHHcCCcEEEEECCCCCHH-------------HHHHhhccC-
Q 023494 131 VPDFIKAGADIVSVH--------CEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLS-------------AIECVLDVV- 188 (281)
Q Consensus 131 i~~~~~aGAd~Itvh--------~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie-------------~~~~~l~~v- 188 (281)
.+++.++|++++.+. .| +++.+.+-++.+.++|+++.+=+.- ..+ .+...+..+
T Consensus 79 ~~mL~d~G~~~ViiGHSERR~~f~E--td~~v~~Kv~~Al~~GL~pI~CvGE--~leere~g~t~~vv~~Ql~~~l~~~~ 154 (250)
T 1yya_A 79 ARMLSDLGCRYAIVGHSERRRYHGE--TDALVAEKAKRLLEEGITPILCVGE--PLEVREKGEAVPYTLRQLRGSLEGVE 154 (250)
T ss_dssp HHHHHHTTCSEEEESCHHHHHHSCC--CHHHHHHHHHHHHHTTCEEEEEECC--CHHHHHTTCHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHcCCCEEEeCchhhhcccCC--CHHHHHHHHHHHHHCCCEEEEEcCC--cHHHHhcCCHHHHHHHHHHHHHhcCC
Confidence 678899999999985 44 3456777888899999999887753 332 223333332
Q ss_pred -C-----EEEEEeecC----CCCCCccchhHHH-HHHHHHHHhhhc-----CCCCeEEEecCCChhcHHHHHHc-CCcEE
Q 023494 189 -D-----LVLIMSVNP----GFGGQSFIESQVK-KISDLRRMCLEK-----GVNPWIEVDGGVGPKNAYKVIEA-GANAL 251 (281)
Q Consensus 189 -D-----~IlvmsV~p----G~~GQ~f~~~~l~-kI~~lr~l~~~~-----~~~~~I~VDGGI~~e~i~~~~~a-GAD~~ 251 (281)
+ +|.+ +| |. |+.-.|+..+ -.+.+|+.+.+. ..+++|.-.|+|+++|+.++.+. ++|.+
T Consensus 155 ~~~~~~vvIAY---EPvWAIGT-G~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~ 230 (250)
T 1yya_A 155 PPGPEALVIAY---EPVWAIGT-GKNATPEDAEAMHQAIRKALSERYGEAFASRVRILYGGSVNPKNFADLLSMPNVDGG 230 (250)
T ss_dssp CSSGGGCEEEE---CCGGGSSS-SCCCCHHHHHHHHHHHHHHHHHHHCHHHHTTCEEEEESSCCTTTHHHHHTSTTCCEE
T ss_pred HHHcCcEEEEE---CCHHHhCC-CCCCCHHHHHHHHHHHHHHHHHhcCccccCceeEEEcCCCCHHHHHHHHcCCCCCee
Confidence 3 3433 55 43 4444444432 234444443321 12578889999999999999887 99999
Q ss_pred EEcccccCCCCHHHHHH
Q 023494 252 VAGSAVFGAKDYAEAIK 268 (281)
Q Consensus 252 VvGSaIf~a~dp~~~~~ 268 (281)
-+|++..+++|+.+.++
T Consensus 231 LVGgAsL~a~~F~~ii~ 247 (250)
T 1yya_A 231 LVGGASLELESFLALLR 247 (250)
T ss_dssp EESGGGSSHHHHHHHHH
T ss_pred EeeHHHhChHHHHHHHH
Confidence 99999998777765543
No 176
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=97.22 E-value=0.0039 Score=57.56 Aligned_cols=189 Identities=14% Similarity=0.131 Sum_probs=108.7
Q ss_pred CHHHHHHHHHHcCCCeEEEEeeeCccc-ccccC-------CHHHHHHcCcCCCCCeeEEEEecC--hhhHHHH--HHHcC
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMDGRFV-PNITI-------GPLVVDALRPVTDLPLDVHLMIVE--PEQRVPD--FIKAG 138 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImDG~fv-pn~~~-------G~~~I~~ir~~t~~~idaHLmv~d--p~~~i~~--~~~aG 138 (281)
+..+.++.|.++|+++|++- .|+ |.-.| ..+.++.|++.++.++-+-+--.+ |...... ..++|
T Consensus 25 ~k~~ia~~L~~aGv~~IEvg----~~~~p~~~f~~~~~~~~~e~l~~i~~~~~~~~~~L~r~~~~~~~dv~~~~~a~~~G 100 (320)
T 3dxi_A 25 IVDAYILAMNELPIDYLEVG----YRNKPSKEYMGKFGYTPVSVLKHLRNISTKKIAIMLNEKNTTPEDLNHLLLPIIGL 100 (320)
T ss_dssp HHHHHHHHHHTTTCCEEEEE----ECCSCCSSCCCHHHHCCHHHHHHHHHHCCSEEEEEEEGGGCCGGGHHHHHGGGTTT
T ss_pred HHHHHHHHHHHhCCCEEEEe----cccCCccccccccccChHHHHHHHhhccCCeEEEEecCCCCChhhHHHHHHhhhcC
Confidence 44466678889999999984 333 21111 256777777666666555221111 2222222 24579
Q ss_pred CCEEEEcccccccccHHHHHHHHHHcCCcEEEEEC---CCCCHH-HHHHhh---ccCCEEEEEeecCCCCCCccchhHHH
Q 023494 139 ADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLN---PATSLS-AIECVL---DVVDLVLIMSVNPGFGGQSFIESQVK 211 (281)
Q Consensus 139 Ad~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~---p~t~ie-~~~~~l---~~vD~IlvmsV~pG~~GQ~f~~~~l~ 211 (281)
+|.+.+.......+...+.++.+|+.|+++...+. |.++.+ .+.... ..+|.|.+- ...|-.......+
T Consensus 101 vd~~ri~~~~~nle~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~l~~~~~~~~G~~~i~l~----Dt~G~~~P~~~~~ 176 (320)
T 3dxi_A 101 VDMIRIAIDPQNIDRAIVLAKAIKTMGFEVGFNVMYMSKWAEMNGFLSKLKAIDKIADLFCMV----DSFGGITPKEVKN 176 (320)
T ss_dssp CSEEEEEECGGGHHHHHHHHHHHHTTTCEEEEEECCTTTGGGSTTSGGGGGGGTTTCSEEEEE----CTTSCCCHHHHHH
T ss_pred CCEEEEEecHHHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCCHHHHHHHHHHhhCCCCEEEEC----cccCCCCHHHHHH
Confidence 99988775421124456677779999999988773 332221 122221 136766552 3344333334455
Q ss_pred HHHHHHHHhhhcCCCCeEEE----ecCCChhcHHHHHHcCCcEEEEc-cc---ccCCCCHHHHHHHHHH
Q 023494 212 KISDLRRMCLEKGVNPWIEV----DGGVGPKNAYKVIEAGANALVAG-SA---VFGAKDYAEAIKGIKT 272 (281)
Q Consensus 212 kI~~lr~l~~~~~~~~~I~V----DGGI~~e~i~~~~~aGAD~~VvG-Sa---If~a~dp~~~~~~l~~ 272 (281)
.++.+++.+ +.+|.+ |-|....|.-..+++|||.+=.- +. -.++.+.++.+..|+.
T Consensus 177 lv~~l~~~~-----~~~i~~H~Hn~~G~a~an~laA~~aGa~~vd~si~GlG~~~GN~~~E~lv~~L~~ 240 (320)
T 3dxi_A 177 LLKEVRKYT-----HVPVGFHGHDNLQLGLINSITAIDDGIDFIDATITGMGRGAGNLKMELLLTYLNK 240 (320)
T ss_dssp HHHHHHHHC-----CSCEEEECBCTTSCHHHHHHHHHHTTCSEEEEBGGGCSSTTCBCBHHHHHHHHHH
T ss_pred HHHHHHHhC-----CCeEEEEeCCCCccHHHHHHHHHHhCCCEEEEeccccCCcccchhHHHHHHHHHh
Confidence 666666654 357777 58888889999999999976322 11 1233455555555554
No 177
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=97.20 E-value=0.0029 Score=59.41 Aligned_cols=118 Identities=22% Similarity=0.282 Sum_probs=79.2
Q ss_pred HHHcCCCEEEEccccc--------cc----------------ccHHHHHHHHHHc-CC-cEEEEECCCC---------CH
Q 023494 134 FIKAGADIVSVHCEQS--------ST----------------IHLHRTLNQIKDL-GA-KAGVVLNPAT---------SL 178 (281)
Q Consensus 134 ~~~aGAd~Itvh~Ea~--------~~----------------~~i~~~l~~ik~~-G~-k~Glai~p~t---------~i 178 (281)
+.++|.|.|-+|.-.. +. .-+.++++++|+. |. .+++=+++.. +.
T Consensus 170 A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~ 249 (361)
T 3gka_A 170 ARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTMGDSDPA 249 (361)
T ss_dssp HHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCSCHH
T ss_pred HHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCCCCCCCcH
Confidence 4578999999997530 00 0145788888865 43 7888888852 23
Q ss_pred HHHHHhh---c--cCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcC-CcEEE
Q 023494 179 SAIECVL---D--VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAG-ANALV 252 (281)
Q Consensus 179 e~~~~~l---~--~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aG-AD~~V 252 (281)
+...+++ + .+|+|-+.. |..+. . .++++|+.. +.++.+-||++++.+.++++.| +|.+.
T Consensus 250 ~~~~~la~~l~~~Gvd~i~v~~---~~~~~----~---~~~~ik~~~-----~iPvi~~Ggit~e~a~~~l~~G~aD~V~ 314 (361)
T 3gka_A 250 ATFGHVARELGRRRIAFLFARE---SFGGD----A---IGQQLKAAF-----GGPFIVNENFTLDSAQAALDAGQADAVA 314 (361)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEC---CCSTT----C---CHHHHHHHH-----CSCEEEESSCCHHHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHHHHHcCCCEEEECC---CCCCH----H---HHHHHHHHc-----CCCEEEeCCCCHHHHHHHHHcCCccEEE
Confidence 3333332 2 389987643 22222 2 234555544 2578889999999999999998 99999
Q ss_pred EcccccCCCCHHHH
Q 023494 253 AGSAVFGAKDYAEA 266 (281)
Q Consensus 253 vGSaIf~a~dp~~~ 266 (281)
+|++++..+|....
T Consensus 315 iGR~~ladPdl~~k 328 (361)
T 3gka_A 315 WGKLFIANPDLPRR 328 (361)
T ss_dssp ESHHHHHCTTHHHH
T ss_pred ECHHhHhCcHHHHH
Confidence 99999987775433
No 178
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=97.20 E-value=0.0064 Score=59.93 Aligned_cols=172 Identities=13% Similarity=0.123 Sum_probs=108.9
Q ss_pred HHHHHHHHHHcCCCeEEEEeeeCccccc----ccCCHHHHHHcCcC-CCCCeeEEEEecC-------h----hhHHHHHH
Q 023494 72 LGEQVKAVELAGCDWIHVDVMDGRFVPN----ITIGPLVVDALRPV-TDLPLDVHLMIVE-------P----EQRVPDFI 135 (281)
Q Consensus 72 l~~~l~~l~~~G~d~iHiDImDG~fvpn----~~~G~~~I~~ir~~-t~~~idaHLmv~d-------p----~~~i~~~~ 135 (281)
..+.++.|.+.|+++|++.-- +.|... -.-..+.++.|++. ++..+.+.+-..| | ..+++.+.
T Consensus 49 Kl~Ia~~L~~~Gv~~IE~G~p-atF~~~~rfl~~d~~e~lr~l~~~~~~~~l~~L~R~~N~~G~~~ypddv~~~~ve~a~ 127 (539)
T 1rqb_A 49 MVGACADIDAAGYWSVECWGG-ATYDSCIRFLNEDPWERLRTFRKLMPNSRLQMLLRGQNLLGYRHYNDEVVDRFVDKSA 127 (539)
T ss_dssp TGGGHHHHHHTTCSEEEEEET-THHHHHHHTSCCCHHHHHHHHHHHCTTSCEEEEECGGGTTSSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeCcc-cccccchhccCCCHHHHHHHHHHhCCCCEEEEEeccccccCcccCcccccHHHHHHHH
Confidence 334456777789999988410 012221 11234567777663 5666665332111 1 24578889
Q ss_pred HcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEE----CCCCCHHHHHHhhc-----cCCEEEEEeecCCCCCCccc
Q 023494 136 KAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVL----NPATSLSAIECVLD-----VVDLVLIMSVNPGFGGQSFI 206 (281)
Q Consensus 136 ~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai----~p~t~ie~~~~~l~-----~vD~IlvmsV~pG~~GQ~f~ 206 (281)
++|+|.|.+-.-......+...++.+|+.|+++...+ .+.++.+.+.++++ .+|.|.+- -..|-...
T Consensus 128 ~aGvd~vrIf~s~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~L~----DT~G~~~P 203 (539)
T 1rqb_A 128 ENGMDVFRVFDAMNDPRNMAHAMAAVKKAGKHAQGTICYTISPVHTVEGYVKLAGQLLDMGADSIALK----DMAALLKP 203 (539)
T ss_dssp HTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCSTTCCHHHHHHHHHHHHHTTCSEEEEE----ETTCCCCH
T ss_pred hCCCCEEEEEEehhHHHHHHHHHHHHHHCCCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcCCCEEEeC----CCCCCcCH
Confidence 9999999987654335678899999999999986555 33345555555543 27877653 12233233
Q ss_pred hhHHHHHHHHHHHhhhcCCCCeEEE----ecCCChhcHHHHHHcCCcEE
Q 023494 207 ESQVKKISDLRRMCLEKGVNPWIEV----DGGVGPKNAYKVIEAGANAL 251 (281)
Q Consensus 207 ~~~l~kI~~lr~l~~~~~~~~~I~V----DGGI~~e~i~~~~~aGAD~~ 251 (281)
..+.+.++.+++.+++ +.+|.+ |.|....|.-..+++|||.|
T Consensus 204 ~~v~~lv~~l~~~~p~---~i~I~~H~Hnd~GlAvAN~laAveAGa~~V 249 (539)
T 1rqb_A 204 QPAYDIIKAIKDTYGQ---KTQINLHCHSTTGVTEVSLMKAIEAGVDVV 249 (539)
T ss_dssp HHHHHHHHHHHHHHCT---TCCEEEEEBCTTSCHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHhcCC---CceEEEEeCCCCChHHHHHHHHHHhCCCEE
Confidence 3445667777776641 356766 89999999999999999976
No 179
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=97.19 E-value=0.0063 Score=58.74 Aligned_cols=164 Identities=20% Similarity=0.147 Sum_probs=104.3
Q ss_pred HHHHHHcCCCeEEEEeeeCccccc-c-cCCHHHHHHcCcCCCCCeeEEEEecChhhH-HHHHHHcCCCEEEEcccccccc
Q 023494 76 VKAVELAGCDWIHVDVMDGRFVPN-I-TIGPLVVDALRPVTDLPLDVHLMIVEPEQR-VPDFIKAGADIVSVHCEQSSTI 152 (281)
Q Consensus 76 l~~l~~~G~d~iHiDImDG~fvpn-~-~~G~~~I~~ir~~t~~~idaHLmv~dp~~~-i~~~~~aGAd~Itvh~Ea~~~~ 152 (281)
++.+.++|+|++=+ .|.|. - ...++..++|.+.+.. --|=+.++.+... .+.+.+.+.|.|-+|++.
T Consensus 268 a~~a~~~Gad~iGf-----If~~~SpR~V~~~~a~~i~~~~~v-~~VgVFvn~~~~~i~~~~~~~~ld~vQLHG~E---- 337 (452)
T 1pii_A 268 AKAAYDAGAIYGGL-----IFVATSPRCVNVEQAQEVMAAAPL-QYVGVFRNHDIADVVDKAKVLSLAAVQLHGNE---- 337 (452)
T ss_dssp HHHHHHHTCSEEEE-----ECCTTCTTBCCHHHHHHHHHHCCC-EEEEEESSCCHHHHHHHHHHHTCSEEEECSCC----
T ss_pred HHHHHhcCCCEEEe-----ecCCCCCCCCCHHHHHHHHhcCCC-CEEEEEeCCCHHHHHHHHHhcCCCEEEECCCC----
Confidence 45566789999744 23332 1 3367777777554433 3344567655545 455677899999999863
Q ss_pred cHHHHHHHHHHc---CCcEEEEECCCCCHHHHHHhhccCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeE
Q 023494 153 HLHRTLNQIKDL---GAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWI 229 (281)
Q Consensus 153 ~i~~~l~~ik~~---G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I 229 (281)
++ +.++.+++. ++++.-++.....++. ..|. .+|++++=+ ..|-+|+.|.-+.+.. . ...++
T Consensus 338 ~~-~~~~~l~~~~p~~~~iika~~v~~~~~~-~~~~-~~d~~LlD~-~~GGtG~~fdW~~l~~------~-----~~~p~ 402 (452)
T 1pii_A 338 EQ-LYIDTLREALPAHVAIWKALSVGETLPA-REFQ-HVDKYVLDN-GQGGSGQRFDWSLLNG------Q-----SLGNV 402 (452)
T ss_dssp CH-HHHHHHHHHSCTTSEEEEEEECSSSCCC-CCCT-TCCEEEEES-CSCCSSCCCCGGGGTT------S-----CCTTE
T ss_pred CH-HHHHHHHhhccCCCcEEEEEecCCccch-hhhh-cccEEEecC-CCCCCCCccCHHHhhc------c-----cCCcE
Confidence 22 344555553 6777777776654432 2222 478988744 4466788886544321 0 12467
Q ss_pred EEecCCChhcHHHHHHcCCcEEEEcccccC---CCCHH
Q 023494 230 EVDGGVGPKNAYKVIEAGANALVAGSAVFG---AKDYA 264 (281)
Q Consensus 230 ~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~---a~dp~ 264 (281)
.+.||+|++|+.+.++.++..+=+-|.+=. ..|+.
T Consensus 403 iLAGGL~p~NV~~ai~~~p~gvDvsSGVE~~pG~KD~~ 440 (452)
T 1pii_A 403 LLAGGLGADNCVEAAQTGCAGLDFNSAVESQPGIKDAR 440 (452)
T ss_dssp EEESSCCTTTHHHHHTTCCSEEEECGGGEEETTEECHH
T ss_pred EEEcCCCHHHHHHHHhcCCCEEEeCCceeCCCCCCCHH
Confidence 799999999999888899998888888742 24665
No 180
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=97.18 E-value=0.0042 Score=55.52 Aligned_cols=129 Identities=16% Similarity=0.222 Sum_probs=84.7
Q ss_pred HHHHHHcCCCEEEEc--------ccccccccHHHHHHHHHHcCCcEEEEECCCCCHH-------------HHHHhhccC-
Q 023494 131 VPDFIKAGADIVSVH--------CEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLS-------------AIECVLDVV- 188 (281)
Q Consensus 131 i~~~~~aGAd~Itvh--------~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie-------------~~~~~l~~v- 188 (281)
.+++.++|++++.+. .| +++.+.+-++.+.++|+++.+=+.- .++ .+...+..+
T Consensus 79 ~~mL~d~G~~~ViiGHSERR~~f~E--td~~v~~Kv~~Al~~GL~pI~CvGE--tleere~g~t~~vv~~Ql~~~l~~~~ 154 (252)
T 2btm_A 79 PVMLKDLGVTYVILGHSERRQMFAE--TDETVNKKVLAAFTRGLIPIICCGE--SLEEREAGQTNAVVASQVEKALAGLT 154 (252)
T ss_dssp HHHHHHHTCCEEEESCHHHHHHSCC--CHHHHHHHHHHHHHHTCEEEEEECC--CHHHHHTTCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHcCCCEEEeCchhcccccCC--CHHHHHHHHHHHHHCCCEEEEEcCC--cHHHHhCCCHHHHHHHHHHHHHhcCC
Confidence 568899999999885 34 2455666688889999999887752 322 123333333
Q ss_pred -C-----EEEEEeecC----CCCCCccchhHH-HHHHHHHHHhhhc-----CCCCeEEEecCCChhcHHHHH-HcCCcEE
Q 023494 189 -D-----LVLIMSVNP----GFGGQSFIESQV-KKISDLRRMCLEK-----GVNPWIEVDGGVGPKNAYKVI-EAGANAL 251 (281)
Q Consensus 189 -D-----~IlvmsV~p----G~~GQ~f~~~~l-~kI~~lr~l~~~~-----~~~~~I~VDGGI~~e~i~~~~-~aGAD~~ 251 (281)
+ +|.+ +| |. |..-.|+.. +-.+.+|+.+.+. ..+++|.-.|+|+++|+.++. +.++|.+
T Consensus 155 ~~~~~~~vIAY---EPvWAIGT-G~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~ 230 (252)
T 2btm_A 155 PEQVKQAVIAY---EPIWAIGT-GKSSTPEDANSVCGHIRSVVSRLFGPEAAEAIRIQYGGSVKPDNIRDFLAQQQIDGA 230 (252)
T ss_dssp HHHHTTCEEEE---CCGGGTTT-SCCCCHHHHHHHHHHHHHHHHHHHCHHHHTTSEEEEESSCCTTTHHHHHTSTTCCEE
T ss_pred HHHcCCEEEEE---CCHHHhCC-CCCCCHHHHHHHHHHHHHHHHHhcCccccCceeEEEcCCCCHHHHHHHHcCCCCCee
Confidence 2 3433 55 43 444334333 2233444443221 125788899999999999988 8999999
Q ss_pred EEcccccCCCCHHHHH
Q 023494 252 VAGSAVFGAKDYAEAI 267 (281)
Q Consensus 252 VvGSaIf~a~dp~~~~ 267 (281)
-+|++..+++|+.+.+
T Consensus 231 LVGgAsL~a~~F~~Ii 246 (252)
T 2btm_A 231 LVGGASLEPASFLQLV 246 (252)
T ss_dssp EESGGGSSHHHHHHHH
T ss_pred EecHHHhChHHHHHHH
Confidence 9999999877666544
No 181
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=97.15 E-value=0.003 Score=59.28 Aligned_cols=118 Identities=19% Similarity=0.192 Sum_probs=78.9
Q ss_pred HHHcCCCEEEEccccc--------cc----------------ccHHHHHHHHHHc-CC-cEEEEECCCC---------CH
Q 023494 134 FIKAGADIVSVHCEQS--------ST----------------IHLHRTLNQIKDL-GA-KAGVVLNPAT---------SL 178 (281)
Q Consensus 134 ~~~aGAd~Itvh~Ea~--------~~----------------~~i~~~l~~ik~~-G~-k~Glai~p~t---------~i 178 (281)
+.++|.|.|-+|.-.. +. .-+.++++++|+. |. .+++=+++.. +.
T Consensus 162 a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~ 241 (362)
T 4ab4_A 162 AKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDMGDADRA 241 (362)
T ss_dssp HHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCTTHH
T ss_pred HHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccccccCCCCcH
Confidence 4578999999997630 00 0145778888764 43 7899888763 23
Q ss_pred HHHHHhh---c--cCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcC-CcEEE
Q 023494 179 SAIECVL---D--VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAG-ANALV 252 (281)
Q Consensus 179 e~~~~~l---~--~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aG-AD~~V 252 (281)
+...+++ . .+|+|-+.. |..|.. -++++|+.. +.++.+-||++++.+.++++.| +|.+.
T Consensus 242 ~~~~~la~~l~~~Gvd~i~v~~---~~~~~~-------~~~~ik~~~-----~iPvi~~Ggit~e~a~~~l~~g~aD~V~ 306 (362)
T 4ab4_A 242 ETFTYVARELGKRGIAFICSRE---READDS-------IGPLIKEAF-----GGPYIVNERFDKASANAALASGKADAVA 306 (362)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEC---CCCTTC-------CHHHHHHHH-----CSCEEEESSCCHHHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECC---CCCCHH-------HHHHHHHHC-----CCCEEEeCCCCHHHHHHHHHcCCccEEE
Confidence 3333332 2 389987643 222321 234455544 2578889999999999999998 99999
Q ss_pred EcccccCCCCHHHH
Q 023494 253 AGSAVFGAKDYAEA 266 (281)
Q Consensus 253 vGSaIf~a~dp~~~ 266 (281)
+|++++..+|.-..
T Consensus 307 iGR~~lanPdl~~k 320 (362)
T 4ab4_A 307 FGVPFIANPDLPAR 320 (362)
T ss_dssp ESHHHHHCTTHHHH
T ss_pred ECHHhHhCcHHHHH
Confidence 99999987775433
No 182
>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 2y70_A 2y6z_A* 1ml1_A 2wsr_A 3q37_A 2v2h_A 2v2d_A 1dkw_A ...
Probab=97.14 E-value=0.0096 Score=53.15 Aligned_cols=132 Identities=17% Similarity=0.220 Sum_probs=86.1
Q ss_pred HHHHHHcCCCEEEEc--------ccccccccHHHHHHHHHHcCCcEEEEECCCCCHHH-------------HHHhhccC-
Q 023494 131 VPDFIKAGADIVSVH--------CEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSA-------------IECVLDVV- 188 (281)
Q Consensus 131 i~~~~~aGAd~Itvh--------~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~-------------~~~~l~~v- 188 (281)
.+++.++|++++.+. .| +++.+.+-++.+.++|+.+.+=+. ..++. ++..+..+
T Consensus 80 ~~mL~d~G~~~ViiGHSERR~~f~E--td~~v~~Kv~~Al~~GL~pI~CvG--Etleere~g~t~~vv~~Ql~~~l~~~~ 155 (250)
T 2j27_A 80 LPILKDFGVNWIVLGHSERRAYYGE--TNEIVADKVAAAVASGFMVIACIG--ETLQERESGRTAVVVLTQIAAIAKKLK 155 (250)
T ss_dssp HHHHHHTTCCEEEESCHHHHHHSCC--CHHHHHHHHHHHHHHTCEEEEEEC--CCHHHHHTTCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHcCCCEEEECchhhhcccCC--CHHHHHHHHHHHHHCCCEEEEEeC--CCHHHhhcccHHHHHHHHHHHHHhcCC
Confidence 678999999999985 44 345677788889999999888775 23321 12222222
Q ss_pred ------CEEEEEeecC-CCCCCccchhHHH-HHHHHHHHhhhc-----CCCCeEEEecCCChhcHHHHH-HcCCcEEEEc
Q 023494 189 ------DLVLIMSVNP-GFGGQSFIESQVK-KISDLRRMCLEK-----GVNPWIEVDGGVGPKNAYKVI-EAGANALVAG 254 (281)
Q Consensus 189 ------D~IlvmsV~p-G~~GQ~f~~~~l~-kI~~lr~l~~~~-----~~~~~I~VDGGI~~e~i~~~~-~aGAD~~VvG 254 (281)
.+|.+=+|.. | +|..-.|+..+ -.+.+|+.+.+. ..+++|.-.|+|+++|+.++. +.++|.+-+|
T Consensus 156 ~~~~~~~vIAYEPvWAIG-TG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVG 234 (250)
T 2j27_A 156 KADWAKVVIAYEAVWAIG-TGKVATPQQAQEAHALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLVG 234 (250)
T ss_dssp GGGGGGEEEEEECGGGTT-SSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEEESSCCTTTHHHHHTSTTCCEEEES
T ss_pred HHHhCCEEEEECCHHHhC-CCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCCCHHHHHHHHcCCCCCeeeee
Confidence 1333322321 4 35444444433 234445443321 113678889999999999988 8999999999
Q ss_pred ccccCCCCHHHHHH
Q 023494 255 SAVFGAKDYAEAIK 268 (281)
Q Consensus 255 SaIf~a~dp~~~~~ 268 (281)
++..+ +|+.+.++
T Consensus 235 gAsL~-~~F~~ii~ 247 (250)
T 2j27_A 235 GASLK-PEFVDIIK 247 (250)
T ss_dssp GGGGS-TTHHHHHH
T ss_pred hHHHH-HHHHHHHH
Confidence 99999 88876653
No 183
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=97.12 E-value=0.0016 Score=61.41 Aligned_cols=45 Identities=18% Similarity=0.214 Sum_probs=35.0
Q ss_pred HHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccC
Q 023494 210 VKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFG 259 (281)
Q Consensus 210 l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~ 259 (281)
++-+.++++.++ .+|.++|||+ .+++.+++.+|||.+.+|++++.
T Consensus 267 ~~~l~~v~~~~~-----~pVia~GGI~~~~dv~kal~~GAdaV~iGr~~l~ 312 (380)
T 1p4c_A 267 MEVLAQSVAKTG-----KPVLIDSGFRRGSDIVKALALGAEAVLLGRATLY 312 (380)
T ss_dssp GGTHHHHHHHHC-----SCEEECSSCCSHHHHHHHHHTTCSCEEESHHHHH
T ss_pred HHHHHHHHHHcC-----CeEEEECCCCCHHHHHHHHHhCCcHhhehHHHHH
Confidence 444555555442 3788999997 77999999999999999999764
No 184
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.11 E-value=0.00036 Score=61.86 Aligned_cols=81 Identities=12% Similarity=0.147 Sum_probs=57.8
Q ss_pred CCCCHHHHHHhhc-cCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEE
Q 023494 174 PATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANAL 251 (281)
Q Consensus 174 p~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~ 251 (281)
...|++..+.|.+ .+|.+.+.-......|..... +-|+++.+.. ..+++|+|||+ .++++.++++|||-+
T Consensus 30 ~~dP~~~a~~~~~~gad~lhvvDld~a~~~~~~~~---~~i~~i~~~~-----~~pl~vGGGIrs~e~~~~~l~~GadkV 101 (243)
T 4gj1_A 30 KYNPLKKFKEYEKAGAKELHLVDLTGAKDPSKRQF---ALIEKLAKEV-----SVNLQVGGGIRSKEEVKALLDCGVKRV 101 (243)
T ss_dssp CCCHHHHHHHHHHHTCCEEEEEEHHHHHCGGGCCH---HHHHHHHHHC-----CSEEEEESSCCCHHHHHHHHHTTCSEE
T ss_pred CCCHHHHHHHHHHCCCCEEEEEecCcccccchhHH---HHHHHHHHhc-----CCCeEeccccccHHHHHHHHHcCCCEE
Confidence 3467777777655 488887776665444443333 3344444432 47899999998 799999999999999
Q ss_pred EEcccccCCCC
Q 023494 252 VAGSAVFGAKD 262 (281)
Q Consensus 252 VvGSaIf~a~d 262 (281)
++||+.++.++
T Consensus 102 ii~t~a~~~p~ 112 (243)
T 4gj1_A 102 VIGSMAIKDAT 112 (243)
T ss_dssp EECTTTTTCHH
T ss_pred EEccccccCCc
Confidence 99999996443
No 185
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=97.11 E-value=0.0047 Score=57.51 Aligned_cols=128 Identities=16% Similarity=0.221 Sum_probs=83.7
Q ss_pred HHHcCCCEEEEccc---------cc-----------c----cccHHHHHHHHHHc---CCcEEEEECCC------CCHHH
Q 023494 134 FIKAGADIVSVHCE---------QS-----------S----TIHLHRTLNQIKDL---GAKAGVVLNPA------TSLSA 180 (281)
Q Consensus 134 ~~~aGAd~Itvh~E---------a~-----------~----~~~i~~~l~~ik~~---G~k~Glai~p~------t~ie~ 180 (281)
+.++|.|.|-+|+. +. + ..-+.++++++|+. +..+++=++|. .+.+.
T Consensus 152 a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~~ 231 (343)
T 3kru_A 152 ANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDM 231 (343)
T ss_dssp HHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHHH
T ss_pred ccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhccCccHHH
Confidence 45789999999942 10 0 01146788888876 45789888874 23444
Q ss_pred HHHhhc----cCCEEEEEeecCCCCCCc---cchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEE
Q 023494 181 IECVLD----VVDLVLIMSVNPGFGGQS---FIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANAL 251 (281)
Q Consensus 181 ~~~~l~----~vD~IlvmsV~pG~~GQ~---f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~ 251 (281)
..++++ .+|+|-+. +.+...++ .....++-++++|+.. +++|.+.|||+ ++.+.++++.| +|.+
T Consensus 232 ~~~~a~~l~~~vd~i~vs--~g~~~~~~~~~~~~~~~~~~~~ir~~~-----~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V 304 (343)
T 3kru_A 232 MVEYINMIKDKVDLIDVS--SGGLLNVDINLYPGYQVKYAETIKKRC-----NIKTSAVGLITTQELAEEILSNERADLV 304 (343)
T ss_dssp HHHHHHHHTTTCSEEEEE--CCCSSCCCCCCCTTTTHHHHHHHHHHH-----TCEEEEESSCCCHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHhhccccEEecc--CCceEeeeecccCceeehHHHHHHHhc-----CcccceeeeeeHHHHHHHHHhchhhHHH
Confidence 333322 27888763 22222221 1112345566666654 36899999996 89999999998 9999
Q ss_pred EEcccccCCCCHHHHHH
Q 023494 252 VAGSAVFGAKDYAEAIK 268 (281)
Q Consensus 252 VvGSaIf~a~dp~~~~~ 268 (281)
.+|++++..+|.-..++
T Consensus 305 ~iGR~~lanPdl~~k~~ 321 (343)
T 3kru_A 305 ALGRELLRNPYWVLHTY 321 (343)
T ss_dssp EESHHHHHCTTHHHHTC
T ss_pred HHHHHHhcCCeEEEEEe
Confidence 99999998777655443
No 186
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A 3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 3pvf_A 3py2_A 2vfd_A 2vfe_A*
Probab=97.09 E-value=0.025 Score=50.34 Aligned_cols=132 Identities=19% Similarity=0.285 Sum_probs=86.8
Q ss_pred HHHHHHcCCCEEEEc--------ccccccccHHHHHHHHHHcCCcEEEEECCCCCHHH-------------HHHhhccC-
Q 023494 131 VPDFIKAGADIVSVH--------CEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSA-------------IECVLDVV- 188 (281)
Q Consensus 131 i~~~~~aGAd~Itvh--------~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~-------------~~~~l~~v- 188 (281)
.+++.++|++++.+. .| +++.+.+-++.+.++|+++.+=+. ...+. ++..+..+
T Consensus 80 ~~mL~d~G~~~ViiGHSERR~~f~E--td~~v~~Kv~~Al~~GL~pI~CvG--Etleere~g~t~~vv~~Ql~~~l~~~~ 155 (248)
T 1o5x_A 80 AEIAKDLNIEYVIIGHFERRKYFHE--TDEDVREKLQASLKNNLKAVVCFG--ESLEQREQNKTIEVITKQVKAFVDLID 155 (248)
T ss_dssp HHHHHHTTCCEEEECCHHHHHHSCC--CHHHHHHHHHHHHHTTCEEEEEEC--CCHHHHHTTCHHHHHHHHHHTTGGGCC
T ss_pred HHHHHHcCCCEEEeCChhhhcccCC--CHHHHHHHHHHHHHCCCEEEEEcC--CcHHHHhcCChHHHHHHHHHHHHhhhh
Confidence 678899999999985 44 345677788889999999988775 23321 11123222
Q ss_pred --CEEEEEeecCCC---CCCccchhHH-HHHHHHHHHhhhc-----CCCCeEEEecCCChhcHHHHHH-cCCcEEEEccc
Q 023494 189 --DLVLIMSVNPGF---GGQSFIESQV-KKISDLRRMCLEK-----GVNPWIEVDGGVGPKNAYKVIE-AGANALVAGSA 256 (281)
Q Consensus 189 --D~IlvmsV~pG~---~GQ~f~~~~l-~kI~~lr~l~~~~-----~~~~~I~VDGGI~~e~i~~~~~-aGAD~~VvGSa 256 (281)
.-+ +..-+|=+ +|..-.|+.. +-.+.+|+.+.+. ..+++|.-.|+|+++|+.++.+ .++|.+-+|++
T Consensus 156 ~~~~~-vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgA 234 (248)
T 1o5x_A 156 NFDNV-ILVYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNA 234 (248)
T ss_dssp CTTSE-EEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSEEEECSCCCTTTHHHHHTSTTCCEEEECGG
T ss_pred hhcCE-EEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcCccccCcceEEEcCCCCHHHHHHHHcCCCCCeeEeeHH
Confidence 111 22446622 2444444443 3334445543321 0136788899999999999987 99999999999
Q ss_pred ccCCCCHHHHHH
Q 023494 257 VFGAKDYAEAIK 268 (281)
Q Consensus 257 If~a~dp~~~~~ 268 (281)
..+ +|+.+.++
T Consensus 235 sL~-~~F~~ii~ 245 (248)
T 1o5x_A 235 SLK-ESFVDIIK 245 (248)
T ss_dssp GGS-TTHHHHHH
T ss_pred HHH-HHHHHHHH
Confidence 999 98876654
No 187
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=97.08 E-value=0.0057 Score=56.31 Aligned_cols=144 Identities=17% Similarity=0.131 Sum_probs=89.1
Q ss_pred cCcC-CCCCeeEEEEe-----cChhhHHHHHHHcCCCEEEEccccc------cccc---HHHHHHHHHHcCCcEEEE-EC
Q 023494 110 LRPV-TDLPLDVHLMI-----VEPEQRVPDFIKAGADIVSVHCEQS------STIH---LHRTLNQIKDLGAKAGVV-LN 173 (281)
Q Consensus 110 ir~~-t~~~idaHLmv-----~dp~~~i~~~~~aGAd~Itvh~Ea~------~~~~---i~~~l~~ik~~G~k~Gla-i~ 173 (281)
+|.. ++.|+..-+-. .+|....+.+..+|++.+.+|.... ...+ ..+.++++++.++.+.+- +.
T Consensus 111 l~~~~~d~pv~~~~~~~q~~~~~~~~~~~a~~~~~~~a~~i~~n~~~~~~~~~~~~~~~~~~~i~~vr~~~~Pv~vK~v~ 190 (332)
T 1vcf_A 111 VRKVAPKALLIANLGLAQLRRYGRDDLLRLVEMLEADALAFHVNPLQEAVQRGDTDFRGLVERLAELLPLPFPVMVKEVG 190 (332)
T ss_dssp CTTTCSSSCEEEEEEGGGGGTCCHHHHHHHHHHHTCSEEEEECCHHHHHHTTSCCCCTTHHHHHHHHCSCSSCEEEECSS
T ss_pred eeccCCCceeecccChhhhhccChHHHHHHHhhcCCCceeeccchHHHHhcCCCccHHHHHHHHHHHHcCCCCEEEEecC
Confidence 4443 45666544442 2344444444445888877775310 1112 357788888766677765 55
Q ss_pred CCCCHHHHHHhhc-cCCEEEEEeecCCC--------CC---------CccchhHHHHHHHHHHHhhhcCCCCeEEEecCC
Q 023494 174 PATSLSAIECVLD-VVDLVLIMSVNPGF--------GG---------QSFIESQVKKISDLRRMCLEKGVNPWIEVDGGV 235 (281)
Q Consensus 174 p~t~ie~~~~~l~-~vD~IlvmsV~pG~--------~G---------Q~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI 235 (281)
++...+..+.+.+ .+|.|.+ +.+.|. .. ..+-+.+++-|.++++..+ +++|.++|||
T Consensus 191 ~g~~~e~a~~~~~~G~d~I~v-s~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~----~ipvia~GGI 265 (332)
T 1vcf_A 191 HGLSREAALALRDLPLAAVDV-AGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLP----HLPLVASGGV 265 (332)
T ss_dssp SCCCHHHHHHHTTSCCSEEEC-CCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCS----SSCEEEESSC
T ss_pred CCCCHHHHHHHHHcCCCEEEe-CCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcC----CCeEEEECCC
Confidence 5566777666555 3899976 223231 11 1122345666666666542 4789999999
Q ss_pred C-hhcHHHHHHcCCcEEEEccccc
Q 023494 236 G-PKNAYKVIEAGANALVAGSAVF 258 (281)
Q Consensus 236 ~-~e~i~~~~~aGAD~~VvGSaIf 258 (281)
. .+.+.+++.+|||.+-+|++++
T Consensus 266 ~~~~d~~kal~~GAd~V~igr~~l 289 (332)
T 1vcf_A 266 YTGTDGAKALALGADLLAVARPLL 289 (332)
T ss_dssp CSHHHHHHHHHHTCSEEEECGGGH
T ss_pred CCHHHHHHHHHhCCChHhhhHHHH
Confidence 8 7889999999999999999876
No 188
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=97.07 E-value=0.0036 Score=57.18 Aligned_cols=176 Identities=17% Similarity=0.171 Sum_probs=102.0
Q ss_pred CccCHHHHHHHHHHcCCCeEEEEeeeCcccccc--cCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEc
Q 023494 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNI--TIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVH 145 (281)
Q Consensus 68 D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~--~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh 145 (281)
+...+.++++.+.+.|++.+++ ..|. .|.+ ..=.++++.+++. +..+.+..-..+ .+.++.+.++|++.+.+.
T Consensus 85 s~eei~~~i~~~~~~g~~~i~~--~gGe-~p~~~~~~~~~li~~i~~~-~~~i~~s~g~l~-~e~l~~L~~ag~~~v~i~ 159 (348)
T 3iix_A 85 TPEEIVERARLAVQFGAKTIVL--QSGE-DPYXMPDVISDIVKEIKKM-GVAVTLSLGEWP-REYYEKWKEAGADRYLLR 159 (348)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEE--EESC-CGGGTTHHHHHHHHHHHTT-SCEEEEECCCCC-HHHHHHHHHHTCCEEECC
T ss_pred CHHHHHHHHHHHHHCCCCEEEE--EeCC-CCCccHHHHHHHHHHHHhc-CceEEEecCCCC-HHHHHHHHHhCCCEEeee
Confidence 4456667777777788887654 6664 2433 2334566666654 322221111112 246788999999999988
Q ss_pred ccccc------------cccHHHHHHHHHHcCCcEEEEE--C-CCCCHHHHHHhhc-----cCCEEEEEeecC--CCCCC
Q 023494 146 CEQSS------------TIHLHRTLNQIKDLGAKAGVVL--N-PATSLSAIECVLD-----VVDLVLIMSVNP--GFGGQ 203 (281)
Q Consensus 146 ~Ea~~------------~~~i~~~l~~ik~~G~k~Glai--~-p~t~ie~~~~~l~-----~vD~IlvmsV~p--G~~GQ 203 (281)
.|+.+ .+...+.++.+++.|++++..+ . |+...+.+.+.+. .++.+.+....| |..-.
T Consensus 160 let~~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~G~p~et~e~~~~~~~~l~~l~~~~i~i~~~~p~~gt~l~ 239 (348)
T 3iix_A 160 HETANPVLHRKLRPDTSFENRLNCLLTLKELGYETGAGSMVGLPGQTIDDLVDDLLFLKEHDFDMVGIGPFIPHPDTPLA 239 (348)
T ss_dssp CBCSCHHHHHHHSTTSCHHHHHHHHHHHHHTTCEEEECBEESCTTCCHHHHHHHHHHHHHHTCSEECCEECCCCTTSTTT
T ss_pred eeeCCHHHHHHhCCCcCHHHHHHHHHHHHHhCCeeccceEEeCCCCCHHHHHHHHHHHHhcCCCEEeeeeeecCCCCCcc
Confidence 77531 1235567778889999887643 3 3455555554433 267776655544 43211
Q ss_pred cc----chhHHHHHHHHHHHhhhcCCCCeEEEecC---CChhcHHHHHHcCCcEEE
Q 023494 204 SF----IESQVKKISDLRRMCLEKGVNPWIEVDGG---VGPKNAYKVIEAGANALV 252 (281)
Q Consensus 204 ~f----~~~~l~kI~~lr~l~~~~~~~~~I~VDGG---I~~e~i~~~~~aGAD~~V 252 (281)
.. ..+.++.+..+|.+++. ..|-+.++ ++++....++.+|||.+.
T Consensus 240 ~~~~~~~~e~~~~~a~~R~~lp~----~~i~~~~~~~~~~~~~~~~~l~~Gan~i~ 291 (348)
T 3iix_A 240 NEKKGDFTLTLKMVALTRILLPD----SNIPATTAMGTIVPGGREITLRCGANVIM 291 (348)
T ss_dssp TSCCCCHHHHHHHHHHHHHHSTT----SBCBCCHHHHHHSTTHHHHHHTTTCCEEC
T ss_pred cCCCCCHHHHHHHHHHHHHHCCC----CCchhcchhhhcCHHHHHHHHhcCCcEEe
Confidence 11 13334445555655543 23444444 556667788999999887
No 189
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=97.07 E-value=0.028 Score=52.07 Aligned_cols=209 Identities=16% Similarity=0.226 Sum_probs=119.8
Q ss_pred EEEeccC-ccCHHHHHHHHHHcCCCeEEEEe-----eeCc-----------ccccc---cCCHH-HHHHc---CcCCCCC
Q 023494 62 PSILSAN-FAKLGEQVKAVELAGCDWIHVDV-----MDGR-----------FVPNI---TIGPL-VVDAL---RPVTDLP 117 (281)
Q Consensus 62 pSila~D-~~~l~~~l~~l~~~G~d~iHiDI-----mDG~-----------fvpn~---~~G~~-~I~~i---r~~t~~~ 117 (281)
|-++|+= +.+-.+.++.+...|.-.+.+-= -.|+ +.+.+ ..|.+ +++.+ ++..+.|
T Consensus 49 PvglAaG~~~~~~e~~~~l~~~G~G~v~~~tvt~~pq~GNp~PR~~~l~~~~iN~~G~~n~G~~~~~~~~~~~~~~~~~p 128 (354)
T 3tjx_A 49 PFMNAAGVMCTTTEELVAMTESASGSLVSKSCTPALREGNPTPRYQALPLGSINSMGLPNNGFDFYLAYAAEQHDYGKKP 128 (354)
T ss_dssp SEEECTTSSCSSHHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETTEEEECCCCCBCCHHHHHHHHHHTCCTTTCC
T ss_pred CcEEccCCCCCCHHHHHHHHHcCCCEEEeCCcCcccccCCCCCeEEEcccccccccccCCHHHHHHHHHHHHhhccCCce
Confidence 5555543 45556788899888888776631 1111 01112 22433 23333 3335678
Q ss_pred eeEEEEecChhhHHHH---H---HHcCCCEEEEcccccc----------cccHHHHHHHHHHc-CCcEEEEECCCCCHHH
Q 023494 118 LDVHLMIVEPEQRVPD---F---IKAGADIVSVHCEQSS----------TIHLHRTLNQIKDL-GAKAGVVLNPATSLSA 180 (281)
Q Consensus 118 idaHLmv~dp~~~i~~---~---~~aGAd~Itvh~Ea~~----------~~~i~~~l~~ik~~-G~k~Glai~p~t~ie~ 180 (281)
+.+-+.-.+++.+++. + ...++|++.+-.-+.. .+.+.++++..++. ...+.+-+.|......
T Consensus 129 vivsi~g~~~~~~~~~~~~~~~~~~~~ad~ielNiScPn~~g~~~l~~~~~~~~~i~~~v~~~~~~pv~vK~~p~~~~~~ 208 (354)
T 3tjx_A 129 LFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSFGVKMPPYFDFAA 208 (354)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECC---------CTTSHHHHHHHHHHHHHHCCSCEEEEECCCCSHHH
T ss_pred EEEEEecCChHHHHHHHHHHHHhhhcCCCEEEeeeCCCCCcchhhhccCHHHHHHHHHHHHHHhhcccccccCCCCCchh
Confidence 8888888888765443 2 2347999888654310 12245666666654 5567788888866533
Q ss_pred HHHh---h-cc--CCEEEE-------EeecC--------------CCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEec
Q 023494 181 IECV---L-DV--VDLVLI-------MSVNP--------------GFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDG 233 (281)
Q Consensus 181 ~~~~---l-~~--vD~Ilv-------msV~p--------------G~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDG 233 (281)
.... + +. .+.+.. |.++. |.+|.+..|..++.++++++... +++|...|
T Consensus 209 ~~~~~~~~~~~~~~~~i~~i~t~~~~~~id~~~~~~~~~~~~~~GGlSG~~~~~~a~~~v~~~~~~~~----~~pIIg~G 284 (354)
T 3tjx_A 209 FDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCP----GKLIFGCG 284 (354)
T ss_dssp HHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCT----TSEEEEES
T ss_pred HHHHHHHHHhhcccchhheecccccccccccccccccccCcccccccCchhhHHHHHHHHHHHHHhcC----CCcEEEeC
Confidence 2222 2 11 222221 11111 12345555666666766665543 46888899
Q ss_pred CCC-hhcHHHHHHcCCcEEEEccc-ccCCCCH-HHHHHHHHHhc
Q 023494 234 GVG-PKNAYKVIEAGANALVAGSA-VFGAKDY-AEAIKGIKTSK 274 (281)
Q Consensus 234 GI~-~e~i~~~~~aGAD~~VvGSa-If~a~dp-~~~~~~l~~~~ 274 (281)
||. .+.+.+.+.+|||.+=+||+ +|..+.. .+..+.|.+.+
T Consensus 285 GI~s~~Da~e~i~aGAs~Vqv~Ta~~y~GP~~~~~I~~~L~~~L 328 (354)
T 3tjx_A 285 GVYTGEDAFLHVLAGASMVQVGTALQEEGPSIFERLTSELLGVM 328 (354)
T ss_dssp SCCSHHHHHHHHHHTEEEEEECHHHHHHCTTHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHcCCCEEEEChhhhhcCchHHHHHHHHHHHHH
Confidence 998 78898999999999999998 4654443 34445555443
No 190
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=97.06 E-value=0.0075 Score=59.04 Aligned_cols=50 Identities=18% Similarity=0.268 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHhhhc--CCCCeEEEecCCC-hhcHHHHHHcCCcEEEEccccc
Q 023494 209 QVKKISDLRRMCLEK--GVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVF 258 (281)
Q Consensus 209 ~l~kI~~lr~l~~~~--~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf 258 (281)
.++-+.++++.+.++ +.+++|.+||||. .+.+.+++.+|||.+-+|+.++
T Consensus 384 ~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iGr~~l 436 (511)
T 1kbi_A 384 PIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFL 436 (511)
T ss_dssp HHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEECHHHH
T ss_pred hHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEECHHHH
Confidence 355556666655321 1257899999999 7788899999999999999865
No 191
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=97.05 E-value=0.034 Score=49.94 Aligned_cols=194 Identities=13% Similarity=0.153 Sum_probs=129.7
Q ss_pred CccCHHHHHHHHHHcCCCeEEEEeeeCcccccc-cCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEcc
Q 023494 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNI-TIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHC 146 (281)
Q Consensus 68 D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~-~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~ 146 (281)
+.-+.-++...++++|+|-|=+ |--|.- -.-..-+..||+....++...+-. ..++++.+.+..++.||+-.
T Consensus 51 ~~PDpv~aA~~ae~aGAdGITv-----HlReDrRHI~d~Dv~~L~~~i~t~lNlEma~--t~emi~ial~~kP~~vtLVP 123 (278)
T 3gk0_A 51 AYPDPVRAALAAEDAGADAITL-----HLREDRRHIVDADVRTLRPRVKTRMNLECAV--TPEMLDIACEIRPHDACLVP 123 (278)
T ss_dssp SCSCHHHHHHHHHHTTCSEEEE-----ECCTTCSSSCHHHHHHHHHHCSSCEEEEECS--SHHHHHHHHHHCCSEEEECC
T ss_pred CCCCHHHHHHHHHHcCCCEEEe-----ccCCCcccCCHHHHHHHHHHcCCCEEeecCC--CHHHHHHHHHcCCCEEEECC
Confidence 4446667777888999998544 111221 234556777777655666654433 34588889999999999998
Q ss_pred ccc-------------ccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCCCCcc----chh
Q 023494 147 EQS-------------STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSF----IES 208 (281)
Q Consensus 147 Ea~-------------~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f----~~~ 208 (281)
|.. ..+.+..+++.+++.|+++.+.+.|+ .+.++.-.+ .+|+|-+.|- .....+ ...
T Consensus 124 EkreE~TTegGlDv~~~~~~L~~~i~~L~~~GIrVSLFIDpd--~~qI~aA~~~GAd~IELhTG---~YA~a~~~~~~~~ 198 (278)
T 3gk0_A 124 EKRSELTTEGGLDVVGHFDAVRAACKQLADAGVRVSLFIDPD--EAQIRAAHETGAPVIELHTG---RYADAHDAAEQQR 198 (278)
T ss_dssp CSGGGBCSSSSBCTTTTHHHHHHHHHHHHHTTCEEEEEECSC--HHHHHHHHHHTCSEEEECCH---HHHTCSSHHHHHH
T ss_pred CCCCCcCCCcchhhhccHHHHHHHHHHHHHCCCEEEEEeCCC--HHHHHHHHHhCcCEEEEecc---hhhccCCchhHHH
Confidence 752 01237889999999999999999874 333443322 4899987543 211112 234
Q ss_pred HHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHc-CCcEEEEcccccCC---CCHHHHHHHHHHhcC
Q 023494 209 QVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEA-GANALVAGSAVFGA---KDYAEAIKGIKTSKR 275 (281)
Q Consensus 209 ~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~a-GAD~~VvGSaIf~a---~dp~~~~~~l~~~~~ 275 (281)
-+++|.+..++-.+. ++.+....|+|.+|++.+.+. +..-+-+|-+|+.. --.+++++++++.++
T Consensus 199 el~rl~~aA~~A~~l--GL~VnAGHGL~y~Nv~~ia~ip~i~ElnIGHaiIa~Al~~Gl~~AVr~mk~lm~ 267 (278)
T 3gk0_A 199 EFERIATGVDAGIAL--GLKVNAGHGLHYTNVQAIAALPGIAELNIGHAIVAHAVFVGWDNAVREMKAIMV 267 (278)
T ss_dssp HHHHHHHHHHHHHHT--TCEEEECTTCCTTTHHHHHTCTTEEEEEECHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc--CCEEecCCCCCHHHHHHHHhCCCCeEEecCHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 567777776665554 577889999999999987542 34667888877642 245678888887665
No 192
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=97.03 E-value=0.0011 Score=61.24 Aligned_cols=88 Identities=15% Similarity=0.265 Sum_probs=62.5
Q ss_pred HHHHHHHHHHcC--CcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEE
Q 023494 154 LHRTLNQIKDLG--AKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIE 230 (281)
Q Consensus 154 i~~~l~~ik~~G--~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~ 230 (281)
+.+.++.+|+.. .++.+.+. .++.+++.+. .+|+|++=. |.++ .++++.+.++. +++|+
T Consensus 218 i~~Av~~ar~~~p~~kIeVEVd---tldea~eAl~aGaD~I~LDn---------~~~~---~l~~av~~l~~---~v~ie 279 (320)
T 3paj_A 218 IRQAISTAKQLNPGKPVEVETE---TLAELEEAISAGADIIMLDN---------FSLE---MMREAVKINAG---RAALE 279 (320)
T ss_dssp HHHHHHHHHHHSTTSCEEEEES---SHHHHHHHHHTTCSEEEEES---------CCHH---HHHHHHHHHTT---SSEEE
T ss_pred HHHHHHHHHHhCCCCeEEEEEC---CHHHHHHHHHcCCCEEEECC---------CCHH---HHHHHHHHhCC---CCeEE
Confidence 567788888753 56666553 3455555544 589987721 3344 44555555542 58999
Q ss_pred EecCCChhcHHHHHHcCCcEEEEcccccC
Q 023494 231 VDGGVGPKNAYKVIEAGANALVAGSAVFG 259 (281)
Q Consensus 231 VDGGI~~e~i~~~~~aGAD~~VvGSaIf~ 259 (281)
+.||||++|+.++.+.|+|++.+|+...+
T Consensus 280 aSGGIt~~~I~~~a~tGVD~isvGalt~s 308 (320)
T 3paj_A 280 NSGNITLDNLKECAETGVDYISVGALTKH 308 (320)
T ss_dssp EESSCCHHHHHHHHTTTCSEEECTHHHHS
T ss_pred EECCCCHHHHHHHHHcCCCEEEECceecC
Confidence 99999999999999999999999986544
No 193
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A {Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Probab=97.01 E-value=0.0076 Score=54.00 Aligned_cols=132 Identities=20% Similarity=0.302 Sum_probs=86.6
Q ss_pred HHHHHHcCCCEEEEc--------ccccccccHHHHHHHHHHcCCcEEEEECCCCCHHH-------------HHHhhccC-
Q 023494 131 VPDFIKAGADIVSVH--------CEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSA-------------IECVLDVV- 188 (281)
Q Consensus 131 i~~~~~aGAd~Itvh--------~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~-------------~~~~l~~v- 188 (281)
.+++.++|++++.+. .| +++.+.+-++.+.++|+++.+=+.- ..+. ++..+..+
T Consensus 82 ~~mL~d~G~~~ViiGHSERR~~f~E--td~~v~~Kv~~Al~~GL~pI~CvGE--tleere~g~t~~vv~~Ql~~~l~~~~ 157 (256)
T 1aw2_A 82 PAMLKEFGATHIIIGHSERREYHAE--SDEFVAKKFAFLKENGLTPVLCIGE--SDAQNEAGETMAVCARQLDAVINTQG 157 (256)
T ss_dssp HHHHHHHTCCEEEESCHHHHHHSCC--CHHHHHHHHHHHHHHTCEEEEEECC--CHHHHHTTCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCCEEEECchhhccccCC--CHHHHHHHHHHHHHCCCEEEEEcCC--cHHHHhcCCHHHHHHHHHHHHHhcCC
Confidence 578899999999885 44 2455666688889999998887752 3322 12222211
Q ss_pred -C-----EEEEEeecCCC---CCCccchhHHH-HHHHHHHHhhhcC----CCCeEEEecCCChhcHHHHHHc-CCcEEEE
Q 023494 189 -D-----LVLIMSVNPGF---GGQSFIESQVK-KISDLRRMCLEKG----VNPWIEVDGGVGPKNAYKVIEA-GANALVA 253 (281)
Q Consensus 189 -D-----~IlvmsV~pG~---~GQ~f~~~~l~-kI~~lr~l~~~~~----~~~~I~VDGGI~~e~i~~~~~a-GAD~~Vv 253 (281)
+ +|. -+|=+ +|..-.|+..+ -.+.+|+.+.+.+ .+++|.-.|+|+++|+.++.+. ++|.+-+
T Consensus 158 ~~~~~~vvIA---YEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LV 234 (256)
T 1aw2_A 158 VEALEGAIIA---YEPIWAIGTGKAATAEDAQRIHAQIRAHIAEKSEAVAKNVVIQYGGSVKPENAAAYFAQPDIDGALV 234 (256)
T ss_dssp GGGGTTCEEE---ECCTTTTTSSCCCCHHHHHHHHHHHHHHHHTTCHHHHHHCEEEECSCCCTTTHHHHTTSTTCCEEEE
T ss_pred HHHcCCEEEE---ECCHHHhCCCCCCCHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCCCHHHHHHHHcCCCCCeeee
Confidence 2 343 36632 35554444433 3444555543211 1367888999999999999877 9999999
Q ss_pred cccccCCCCHHHHHHH
Q 023494 254 GSAVFGAKDYAEAIKG 269 (281)
Q Consensus 254 GSaIf~a~dp~~~~~~ 269 (281)
|++..+++|+.+.++.
T Consensus 235 GgAsL~a~~F~~Ii~~ 250 (256)
T 1aw2_A 235 GGAALDAKSFAAIAKA 250 (256)
T ss_dssp SGGGGCHHHHHHHHHH
T ss_pred cHHHhChHHHHHHHHH
Confidence 9999988777765543
No 194
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.00 E-value=0.0052 Score=60.43 Aligned_cols=126 Identities=19% Similarity=0.201 Sum_probs=83.0
Q ss_pred hHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEE-EEECCCCCHHHHHHhhc-cCCEEEEEeecCCC------
Q 023494 129 QRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAG-VVLNPATSLSAIECVLD-VVDLVLIMSVNPGF------ 200 (281)
Q Consensus 129 ~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~G-lai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~------ 200 (281)
+.++.+.++|+|.+.+-......+...+.++++|+.--.+- ++=|..|. +..+.+++ .+|.|-+ ++=||.
T Consensus 284 eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~viaGNVaT~-e~a~~Li~aGAD~vkV-GiGpGSiCtTr~ 361 (556)
T 4af0_A 284 DRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNVVTR-EQAAQLIAAGADGLRI-GMGSGSICITQE 361 (556)
T ss_dssp HHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEEEEECSH-HHHHHHHHHTCSEEEE-CSSCSTTBCCTT
T ss_pred HHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEeccccCH-HHHHHHHHcCCCEEee-cCCCCccccccc
Confidence 45778899999999986544333457788888888743333 34454444 44555555 5898876 444542
Q ss_pred -CCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCC
Q 023494 201 -GGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGA 260 (281)
Q Consensus 201 -~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a 260 (281)
.|- -.|+ +.-|.+..+...+ ++++|..||||. ..++.+.+.+|||.+-+||.+-+.
T Consensus 362 v~Gv-G~PQ-~tAi~~~a~~a~~--~~vpvIADGGI~~sGDi~KAlaaGAd~VMlGsllAGt 419 (556)
T 4af0_A 362 VMAV-GRPQ-GTAVYAVAEFASR--FGIPCIADGGIGNIGHIAKALALGASAVMMGGLLAGT 419 (556)
T ss_dssp TCCS-CCCH-HHHHHHHHHHHGG--GTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTB
T ss_pred ccCC-CCcH-HHHHHHHHHHHHH--cCCCEEecCCcCcchHHHHHhhcCCCEEEEchhhccc
Confidence 110 1232 2334444444433 357899999999 779999999999999999988753
No 195
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=96.93 E-value=0.039 Score=51.88 Aligned_cols=167 Identities=19% Similarity=0.194 Sum_probs=101.0
Q ss_pred CHHHHHHHHHHcCCCeEEEEeeeCccccc-ccCCHHHHHHcCcC-CCCCeeEEEEecChhhHHHHHHHcCCCEEEEcccc
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPN-ITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQ 148 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImDG~fvpn-~~~G~~~I~~ir~~-t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea 148 (281)
+..+.++.|.+.|+++|++ | | |. ...-.+.++.+++. .+..+.+... .++. -++.+.++|++.|.+-.-.
T Consensus 26 ~k~~ia~~L~~~Gv~~IE~----g-~-p~~~~~~~~~~~~i~~~~~~~~v~~~~r-~~~~-di~~a~~~g~~~v~i~~~~ 97 (382)
T 2ztj_A 26 DKVEIAKALDEFGIEYIEV----T-T-PVASPQSRKDAEVLASLGLKAKVVTHIQ-CRLD-AAKVAVETGVQGIDLLFGT 97 (382)
T ss_dssp HHHHHHHHHHHHTCSEEEE----C-C-TTSCHHHHHHHHHHHTSCCSSEEEEEEE-SCHH-HHHHHHHTTCSEEEEEECC
T ss_pred HHHHHHHHHHHcCcCEEEE----c-C-CcCCHHHHHHHHHHHhcCCCcEEEEEcc-cChh-hHHHHHHcCCCEEEEEecc
Confidence 3345566777889999888 3 3 32 12223456666654 2233332211 2333 3788899999988875432
Q ss_pred cc-------------cccHHHHHHHHHHcC--CcEEEEECCC--CCHHHHHHhhc----cCCEEEEEeecCCCCCCccch
Q 023494 149 SS-------------TIHLHRTLNQIKDLG--AKAGVVLNPA--TSLSAIECVLD----VVDLVLIMSVNPGFGGQSFIE 207 (281)
Q Consensus 149 ~~-------------~~~i~~~l~~ik~~G--~k~Glai~p~--t~ie~~~~~l~----~vD~IlvmsV~pG~~GQ~f~~ 207 (281)
.. .+.+.+.++.+|+.| .++.+..... ++.+.+.++++ .+|.|.+- -..|-....
T Consensus 98 s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~~~~~~~~~~~~~~~~~~a~~i~l~----DT~G~~~P~ 173 (382)
T 2ztj_A 98 SKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLLAVYEAVAPYVDRVGLA----DTVGVATPR 173 (382)
T ss_dssp --------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTTTSCHHHHHHHHHHHGGGCSEEEEE----ETTSCCCHH
T ss_pred CHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCHHHHHHHHHHHHHhcCEEEec----CCCCCCCHH
Confidence 11 134678889999999 8877765433 34444444432 25666542 223332333
Q ss_pred hHHHHHHHHHHHhhhcCCCCeEEE----ecCCChhcHHHHHHcCCcEEE
Q 023494 208 SQVKKISDLRRMCLEKGVNPWIEV----DGGVGPKNAYKVIEAGANALV 252 (281)
Q Consensus 208 ~~l~kI~~lr~l~~~~~~~~~I~V----DGGI~~e~i~~~~~aGAD~~V 252 (281)
++.+.++.+++.++ .+.+|.+ |.|.-..|.-..+++||+.+=
T Consensus 174 ~~~~lv~~l~~~~~---~~~~i~~H~Hnd~GlAvAN~laAv~aGa~~vd 219 (382)
T 2ztj_A 174 QVYALVREVRRVVG---PRVDIEFHGHNDTGCAIANAYEAIEAGATHVD 219 (382)
T ss_dssp HHHHHHHHHHHHHT---TTSEEEEEEBCTTSCHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHhcC---CCCeEEEEeCCCccHHHHHHHHHHHhCCCEEE
Confidence 44566777776531 2367777 799999999999999999774
No 196
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=96.91 E-value=0.0027 Score=54.36 Aligned_cols=98 Identities=21% Similarity=0.175 Sum_probs=63.0
Q ss_pred HHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEE--ECCCCCHHHHHHhhc--cCCEEEEEeecCCCCCCccchhHH
Q 023494 135 IKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVV--LNPATSLSAIECVLD--VVDLVLIMSVNPGFGGQSFIESQV 210 (281)
Q Consensus 135 ~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Gla--i~p~t~ie~~~~~l~--~vD~IlvmsV~pG~~GQ~f~~~~l 210 (281)
...++|+|+=- -...++.+|++|+.+-.- +-.+..++.-.+.++ ++|++-+| ||. ..|.++
T Consensus 80 ~~~~pdGIIsT--------k~~~i~~Akk~GL~tIqR~FliDs~al~~~~~~I~~~kPD~iEiL---Pg~----v~p~~I 144 (188)
T 1vkf_A 80 KKAGADGIITI--------KPKNYVVAKKNGIPAVLRFFALDSKAVERGIEQIETLGVDVVEVL---PGA----VAPKVA 144 (188)
T ss_dssp HHHTCSEEEES--------CHHHHHHHHHTTCCEEEEEECCSHHHHHHHHHHHHHHTCSEEEEE---SGG----GHHHHH
T ss_pred HhcCCCEEEcC--------cHHHHHHHHHcCCEEeeEEEEEEeHHHhhhhhhccccCCCeEeec---CCC----chHHHH
Confidence 34467777522 224678888899877542 222223333334444 48999888 542 234444
Q ss_pred HHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcc-cccC
Q 023494 211 KKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGS-AVFG 259 (281)
Q Consensus 211 ~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGS-aIf~ 259 (281)
+++ .+.++-+.|+|+ .|.+.+ +++|||.++.|+ .+++
T Consensus 145 ~~v-----------~~~PiIaGGlI~t~edv~~-l~aGA~aIsTs~~~LW~ 183 (188)
T 1vkf_A 145 RKI-----------PGRTVIAAGLVETEEEARE-ILKHVSAISTSSRILWK 183 (188)
T ss_dssp TTS-----------TTSEEEEESCCCSHHHHHH-HTTTSSEEEECCHHHHT
T ss_pred HHh-----------cCCCEEEECCcCCHHHHHH-HHCCCeEEEeCCHHHhC
Confidence 333 146898999999 889999 999999999983 3543
No 197
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.90 E-value=0.0035 Score=62.78 Aligned_cols=130 Identities=9% Similarity=0.013 Sum_probs=79.5
Q ss_pred HHHHcCCCEEEEccccc--------c----------------cccHHHHHHHHHHc---CCcEEEEECC------CCCHH
Q 023494 133 DFIKAGADIVSVHCEQS--------S----------------TIHLHRTLNQIKDL---GAKAGVVLNP------ATSLS 179 (281)
Q Consensus 133 ~~~~aGAd~Itvh~Ea~--------~----------------~~~i~~~l~~ik~~---G~k~Glai~p------~t~ie 179 (281)
.+.++|.|.|-+|.-.. + ..-+.++++++|+. +..+++=++| ..+.+
T Consensus 149 ~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~~~~ 228 (671)
T 1ps9_A 149 LAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFA 228 (671)
T ss_dssp HHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCCCHH
T ss_pred HHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCCCCCHH
Confidence 34678999999996420 0 01146778888874 3445564554 23444
Q ss_pred HHHHhhc-----cCCEEEEEee--cCCCC-CCccch--hHHHHHHHHHHHhhhcCCCCeEEEecCC-ChhcHHHHHHcC-
Q 023494 180 AIECVLD-----VVDLVLIMSV--NPGFG-GQSFIE--SQVKKISDLRRMCLEKGVNPWIEVDGGV-GPKNAYKVIEAG- 247 (281)
Q Consensus 180 ~~~~~l~-----~vD~IlvmsV--~pG~~-GQ~f~~--~~l~kI~~lr~l~~~~~~~~~I~VDGGI-~~e~i~~~~~aG- 247 (281)
...+++. .+|+|.+... ++.+. .+...+ ..++.++++|+. .++++...||| +++++.++++.|
T Consensus 229 ~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-----~~iPvi~~Ggi~~~~~a~~~l~~g~ 303 (671)
T 1ps9_A 229 ETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGH-----VSLPLVTTNRINDPQVADDILSRGD 303 (671)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTS-----CSSCEEECSSCCSHHHHHHHHHTTS
T ss_pred HHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHh-----cCceEEEeCCCCCHHHHHHHHHcCC
Confidence 4333322 3899976431 11111 011111 223444444433 35789999999 699999999998
Q ss_pred CcEEEEcccccCCCCHHHHH
Q 023494 248 ANALVAGSAVFGAKDYAEAI 267 (281)
Q Consensus 248 AD~~VvGSaIf~a~dp~~~~ 267 (281)
||.+.+||+++..+|+...+
T Consensus 304 aD~V~~gR~~l~~P~l~~k~ 323 (671)
T 1ps9_A 304 ADMVSMARPFLADAELLSKA 323 (671)
T ss_dssp CSEEEESTHHHHCTTHHHHH
T ss_pred CCEEEeCHHHHhCcHHHHHH
Confidence 99999999999877765443
No 198
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=96.87 E-value=0.056 Score=47.78 Aligned_cols=194 Identities=13% Similarity=0.152 Sum_probs=129.3
Q ss_pred CHHHHHHHHHHcCCCeEEEEeeeCcccccc-cCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEccccc
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNI-TIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQS 149 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImDG~fvpn~-~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~ 149 (281)
+.-+....++++|+|-|-+ |--|.- -.-..-+..||+..+.++...+- -..++++.+.+..++.+|+-.|.-
T Consensus 26 dpv~aA~~ae~aGAdgITv-----HlReDrRHI~d~Dv~~L~~~~~~~lNlE~a--~t~emi~ia~~~kP~~vtLVPE~r 98 (243)
T 1m5w_A 26 DPVQAAFIAEQAGADGITV-----HLREDRRHITDRDVRILRQTLDTRMNLEMA--VTEEMLAIAVETKPHFCCLVPEKR 98 (243)
T ss_dssp CHHHHHHHHHTTTCSEEEE-----ECCTTCSSSCHHHHHHHHHHCSSEEEEEEC--SSHHHHHHHHHHCCSEEEECCCCS
T ss_pred CHHHHHHHHHHcCCCEEEe-----CCCCCcccCCHHHHHHHHHhcCCCEEeccC--CCHHHHHHHHHcCCCEEEECCCCC
Confidence 4556667788999998654 212221 23456678887765556665443 334588889999999999998831
Q ss_pred -------------ccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecC-CCCCCccchhHHHHHH
Q 023494 150 -------------STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNP-GFGGQSFIESQVKKIS 214 (281)
Q Consensus 150 -------------~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~p-G~~GQ~f~~~~l~kI~ 214 (281)
..+.+..+++.+++.|+++.+.+.|+ .+.++.-.. .+|+|-+.|-.= ...+..-...-+++|.
T Consensus 99 ~e~TTegGldv~~~~~~l~~~i~~L~~~GIrVSLFIDpd--~~qi~aA~~~GA~~IELhTG~Ya~a~~~~~~~~el~~i~ 176 (243)
T 1m5w_A 99 QEVTTEGGLDVAGQRDKMRDACKRLADAGIQVSLFIDAD--EEQIKAAAEVGAPFIEIHTGCYADAKTDAEQAQELARIA 176 (243)
T ss_dssp SCSSCCSCCCSGGGHHHHHHHHHHHHHTTCEEEEEECSC--HHHHHHHHHTTCSEEEEECHHHHHCCSHHHHHHHHHHHH
T ss_pred CCcCCCcchhHHhhHHHHHHHHHHHHHCCCEEEEEeCCC--HHHHHHHHHhCcCEEEEechhhhcCCCchhHHHHHHHHH
Confidence 11237889999999999999999874 444444333 489998865421 1111111234567777
Q ss_pred HHHHHhhhcCCCCeEEEecCCChhcHHHHHHc-CCcEEEEcccccCC---CCHHHHHHHHHHhcC
Q 023494 215 DLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEA-GANALVAGSAVFGA---KDYAEAIKGIKTSKR 275 (281)
Q Consensus 215 ~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~a-GAD~~VvGSaIf~a---~dp~~~~~~l~~~~~ 275 (281)
...++..+. ++.+...-|+|.+|+..+.+. +..-+-+|.+|+.. --.++++++|++.++
T Consensus 177 ~aa~~A~~l--GL~VnAGHgL~y~Nv~~ia~ip~i~ElnIGHaiia~Al~~Gl~~aV~~m~~~~~ 239 (243)
T 1m5w_A 177 KAATFAASL--GLKVNAGHGLTYHNVKAIAAIPEMHELNIGHAIIGRAVMTGLKDAVAEMKRLML 239 (243)
T ss_dssp HHHHHHHHT--TCEEEEESSCCTTTHHHHHTCTTEEEEEECHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHHHc--CCEEecCCCCCHHHHHHHhhCCCCeEEccCHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 776666554 578889999999999998653 34667788777642 246678888887663
No 199
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=96.86 E-value=0.0088 Score=56.37 Aligned_cols=123 Identities=16% Similarity=0.188 Sum_probs=79.5
Q ss_pred HH-HcCCCEEEEccccc----------------------ccc----cHHHHHHHHHHc-CC-cEEEEECCCC--------
Q 023494 134 FI-KAGADIVSVHCEQS----------------------STI----HLHRTLNQIKDL-GA-KAGVVLNPAT-------- 176 (281)
Q Consensus 134 ~~-~aGAd~Itvh~Ea~----------------------~~~----~i~~~l~~ik~~-G~-k~Glai~p~t-------- 176 (281)
+. ++|.|.|-+|.-.. +.+ -+.++++++|+. |- .+++=|+|..
T Consensus 183 a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vRis~~~~~~~~~~~ 262 (379)
T 3aty_A 183 AIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPLNGVHGMIDS 262 (379)
T ss_dssp HHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGGGCCCS
T ss_pred HHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEEECcccccccCCCC
Confidence 46 89999999996420 000 145677778764 42 5888787743
Q ss_pred -CHHHHHHhh---c--cCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcC-Cc
Q 023494 177 -SLSAIECVL---D--VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAG-AN 249 (281)
Q Consensus 177 -~ie~~~~~l---~--~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aG-AD 249 (281)
+.+...+++ . .+|+|-+.. +++..+.+ +. + ++++|+.. +.+|.+.|||+++.+.++++.| ||
T Consensus 263 ~~~~~~~~la~~l~~~Gvd~i~v~~--~~~~~~~~-~~--~-~~~ir~~~-----~iPvi~~G~it~~~a~~~l~~g~aD 331 (379)
T 3aty_A 263 NPEALTKHLCKKIEPLSLAYLHYLR--GDMVNQQI-GD--V-VAWVRGSY-----SGVKISNLRYDFEEADQQIREGKVD 331 (379)
T ss_dssp CHHHHHHHHHHHHGGGCCSEEEEEC--SCTTSCCC-CC--H-HHHHHTTC-----CSCEEEESSCCHHHHHHHHHTTSCS
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEcC--CCcCCCCc-cH--H-HHHHHHHC-----CCcEEEECCCCHHHHHHHHHcCCCe
Confidence 233333332 2 279887653 12222223 21 3 55555433 4689999999999999999998 99
Q ss_pred EEEEcccccCCCCHHHHH
Q 023494 250 ALVAGSAVFGAKDYAEAI 267 (281)
Q Consensus 250 ~~VvGSaIf~a~dp~~~~ 267 (281)
.+.+|++++..++.-..+
T Consensus 332 ~V~igR~~l~~P~l~~k~ 349 (379)
T 3aty_A 332 AVAFGAKFIANPDLVERA 349 (379)
T ss_dssp EEEESHHHHHCTTHHHHH
T ss_pred EEEecHHHHhCcHHHHHH
Confidence 999999988767654433
No 200
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=96.83 E-value=0.028 Score=50.29 Aligned_cols=129 Identities=18% Similarity=0.242 Sum_probs=84.8
Q ss_pred HHHHHHcCCCEEEEc--------ccccccccHHHHHHHHHHcCCcEEEEECCCCCHHH-------------HHHhhccC-
Q 023494 131 VPDFIKAGADIVSVH--------CEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSA-------------IECVLDVV- 188 (281)
Q Consensus 131 i~~~~~aGAd~Itvh--------~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~-------------~~~~l~~v- 188 (281)
.+++.++|+++|.+. .| +++.+.+-++.+.++|+++.+=+.- .++. ++..+..+
T Consensus 81 ~~mL~d~G~~~ViiGHSERR~~f~E--td~~v~~Kv~~Al~~GL~pI~CvGE--tleere~g~t~~vv~~Ql~~~l~~~~ 156 (257)
T 2yc6_A 81 VEMLQDMGLKHVIVGHSERRRIMGE--TDEQSAKKAKRALEKGMTVIFCVGE--TLDERKANRTMEVNIAQLEALGKELG 156 (257)
T ss_dssp HHHHHHTTCCEEEESCHHHHHTSCC--CHHHHHHHHHHHHHTTCEEEEEECC--CHHHHHTTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCEEEECchhhccccCC--CHHHHHHHHHHHHHCCCEEEEEcCC--cHHHHhcCCHHHHHHHHHHHHHhcCC
Confidence 678999999999986 34 3456777888899999999887742 3322 11222222
Q ss_pred --C------EEEEEeecC----CCCCCccchhHHHH-HHHHHHHhhhc-----CCCCeEEEecCCChhcHHHHHHc-CCc
Q 023494 189 --D------LVLIMSVNP----GFGGQSFIESQVKK-ISDLRRMCLEK-----GVNPWIEVDGGVGPKNAYKVIEA-GAN 249 (281)
Q Consensus 189 --D------~IlvmsV~p----G~~GQ~f~~~~l~k-I~~lr~l~~~~-----~~~~~I~VDGGI~~e~i~~~~~a-GAD 249 (281)
+ +| .-+| | +|..-.|+..+. .+.+|+.+.+. ..+++|.-.|+|+++|+.++.+. ++|
T Consensus 157 ~~~~~~~~vvI---AYEPvWAIG-TG~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diD 232 (257)
T 2yc6_A 157 ESKMLWKEVVI---AYEPVWSIG-TGVVATPEQAEEVHVGLRKWFVEKVAAEGAQHIRIIYGGSANGSNNEKLGQCPNID 232 (257)
T ss_dssp TCHHHHHTEEE---EECCGGGTT-TSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEESSCCTTTHHHHHTSTTCC
T ss_pred ChhhccCCEEE---EECCHHHhC-CCCCCCHHHHHHHHHHHHHHHHHhcChhhcccceEEEcCccCHHHHHHHHcCCCCC
Confidence 1 33 3366 4 344444444322 33444443210 12578889999999999999887 999
Q ss_pred EEEEcccccCCCCHHHHHH
Q 023494 250 ALVAGSAVFGAKDYAEAIK 268 (281)
Q Consensus 250 ~~VvGSaIf~a~dp~~~~~ 268 (281)
.+-+|++..+++ ..+.++
T Consensus 233 G~LVGgAsL~a~-F~~Ii~ 250 (257)
T 2yc6_A 233 GFLVGGASLKPE-FMTMID 250 (257)
T ss_dssp EEEESGGGGSTH-HHHHHH
T ss_pred eeeecHHHHHHH-HHHHHH
Confidence 999999999876 655544
No 201
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=96.82 E-value=0.014 Score=55.50 Aligned_cols=128 Identities=19% Similarity=0.305 Sum_probs=81.4
Q ss_pred HHHHcCCCEEEEccccc--------cc----------------ccHHHHHHHHHHc-C-CcEEEEECCCC---------C
Q 023494 133 DFIKAGADIVSVHCEQS--------ST----------------IHLHRTLNQIKDL-G-AKAGVVLNPAT---------S 177 (281)
Q Consensus 133 ~~~~aGAd~Itvh~Ea~--------~~----------------~~i~~~l~~ik~~-G-~k~Glai~p~t---------~ 177 (281)
.+.++|.|.|-+|.-.. +. .-+.++++++|+. | ..+++=|+|.. +
T Consensus 179 ~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~g~~~~~~ 258 (402)
T 2hsa_B 179 NAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLDAMDSNP 258 (402)
T ss_dssp HHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCSTTCCCSCH
T ss_pred HHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccCCCCCCCC
Confidence 34678999999997420 00 0156788888874 4 37888888752 1
Q ss_pred HHHHHHhh----c-c------CCEEEEEeecCCCCC---Cc--cc--h-hHHHHHHHHHHHhhhcCCCCeEEEecCCChh
Q 023494 178 LSAIECVL----D-V------VDLVLIMSVNPGFGG---QS--FI--E-SQVKKISDLRRMCLEKGVNPWIEVDGGVGPK 238 (281)
Q Consensus 178 ie~~~~~l----~-~------vD~IlvmsV~pG~~G---Q~--f~--~-~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e 238 (281)
.+...+++ + . +|+|-+.. ++..+ .+ +. + ..++-++++|+.+ +.+|.+-|||+++
T Consensus 259 ~~~~~~la~~le~~G~~gg~~vd~i~v~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~-----~iPvi~~G~i~~~ 331 (402)
T 2hsa_B 259 LSLGLAVVERLNKIQLHSGSKLAYLHVTQ--PRYVAYGQTEAGRLGSEEEEARLMRTLRNAY-----QGTFICSGGYTRE 331 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCSEEEEEC--CCCCTTTTSSSTTTTHHHHHHHHHHHHHHHC-----SSCEEEESSCCHH
T ss_pred HHHHHHHHHHHHhcCCccCCceEEEEEec--CccccccCCccccccCCcchHHHHHHHHHHC-----CCCEEEeCCCCHH
Confidence 22222222 2 3 78887643 12211 11 10 1 1234455555543 4688899999999
Q ss_pred cHHHHHHcC-CcEEEEcccccCCCCHHHHH
Q 023494 239 NAYKVIEAG-ANALVAGSAVFGAKDYAEAI 267 (281)
Q Consensus 239 ~i~~~~~aG-AD~~VvGSaIf~a~dp~~~~ 267 (281)
.+.++++.| ||.+-+|++++..++.-..+
T Consensus 332 ~a~~~l~~g~aD~V~igR~~l~dP~l~~k~ 361 (402)
T 2hsa_B 332 LGIEAVAQGDADLVSYGRLFISNPDLVMRI 361 (402)
T ss_dssp HHHHHHHTTSCSEEEESHHHHHCTTHHHHH
T ss_pred HHHHHHHCCCCceeeecHHHHhCchHHHHH
Confidence 999999998 99999999998777655443
No 202
>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} SCOP: c.1.1.1
Probab=96.74 E-value=0.019 Score=51.92 Aligned_cols=132 Identities=17% Similarity=0.173 Sum_probs=85.7
Q ss_pred HHHHHHcCCCEEEEc--------ccccccccHHHHHHHHHHcCCcEEEEECCCCCHHH-------------HHHhhccCC
Q 023494 131 VPDFIKAGADIVSVH--------CEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSA-------------IECVLDVVD 189 (281)
Q Consensus 131 i~~~~~aGAd~Itvh--------~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~-------------~~~~l~~vD 189 (281)
.+++.++|+++|.+. .| +++.+.+-++.+.++|+++.+=+.- ..+. ++..+..++
T Consensus 99 ~~mLkd~G~~~ViiGHSERR~~f~E--tde~V~~Kv~~Al~~GL~pI~CvGE--tleeReag~t~~vv~~Ql~~~l~~~~ 174 (275)
T 1mo0_A 99 PAMIKDLGLEWVILGHSERRHVFGE--SDALIAEKTVHALEAGIKVVFCIGE--KLEEREAGHTKDVNFRQLQAIVDKGV 174 (275)
T ss_dssp HHHHHHTTCCEEEESCHHHHHTSCC--CHHHHHHHHHHHHHTTCEEEEEECC--CHHHHHTTCHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHcCCCEEEeCchhhhcccCC--CHHHHHHHHHHHHHCCCEEEEEcCC--cHHHHhCCChHHHHHHHHHHHHhhhh
Confidence 678999999999986 44 3456777888899999999887742 3321 122232111
Q ss_pred ---EEEEEeecC----CCCCCccchhHH-HHHHHHHHHhhhc-----CCCCeEEEecCCChhcHHHH-HHcCCcEEEEcc
Q 023494 190 ---LVLIMSVNP----GFGGQSFIESQV-KKISDLRRMCLEK-----GVNPWIEVDGGVGPKNAYKV-IEAGANALVAGS 255 (281)
Q Consensus 190 ---~IlvmsV~p----G~~GQ~f~~~~l-~kI~~lr~l~~~~-----~~~~~I~VDGGI~~e~i~~~-~~aGAD~~VvGS 255 (281)
-+ +..-+| |. |..-.|+.. +-.+.+|+.+.+. ..+++|.-.|+|+++|+.++ .+.++|++-+|+
T Consensus 175 ~~~~v-vIAYEPvWAIGT-GktAtpe~aqevh~~IR~~l~~~~~~~~a~~vrILYGGSV~~~N~~el~~~~diDG~LVGg 252 (275)
T 1mo0_A 175 SWENI-VIAYEPVWAIGT-GKTASGEQAQEVHEWIRAFLKEKVSPAVADATRIIYGGSVTADNAAELGKKPDIDGFLVGG 252 (275)
T ss_dssp CSTTE-EEEECCGGGTTT-SCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEEESSCCTTTHHHHTTSTTCCEEEESG
T ss_pred hhcCE-EEEECCHHHhCC-CCCCCHHHHHHHHHHHHHHHHHhhChhhcCcccEEEcCCCCHhhHHHHhcCCCCCeeEech
Confidence 11 123466 43 444444443 3334445444321 11367888999999999876 568999999999
Q ss_pred cccCCCCHHHHHH
Q 023494 256 AVFGAKDYAEAIK 268 (281)
Q Consensus 256 aIf~a~dp~~~~~ 268 (281)
+..+++|+.+.++
T Consensus 253 ASLka~~F~~Ii~ 265 (275)
T 1mo0_A 253 ASLKPDFVKIINA 265 (275)
T ss_dssp GGGSTHHHHHHHH
T ss_pred HHhChHHHHHHHH
Confidence 9999887776554
No 203
>3sy1_A UPF0001 protein YGGS; engineered protein, structural genomics, PSI-biology, protei structure initiative; HET: MES; 1.47A {Escherichia coli} PDB: 1w8g_A*
Probab=96.73 E-value=0.024 Score=50.15 Aligned_cols=176 Identities=13% Similarity=0.053 Sum_probs=92.7
Q ss_pred HHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEccccccccc
Q 023494 74 EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIH 153 (281)
Q Consensus 74 ~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~~~~~ 153 (281)
+.++.+.++|++++=+ .++ ..+.+..+.+.....-++..|+.=.-+.+.++.+... +|++..- + +.+.
T Consensus 42 ~~i~~~~~~G~~~fge-----n~v---qEa~~kr~~~~~~~~~~i~w~~iG~lq~nk~~~~~~~-~~~i~sV-d--s~~~ 109 (245)
T 3sy1_A 42 SAIAEAIDAGQRQFSE-----HYV---QEGVDKIRHFQELGVTGLEWNFAGPLQSNKSRLVAEH-FDWCITI-D--RLRI 109 (245)
T ss_dssp HHHHHHHHTTCCEEEE-----SSH---HHHHHHHHHHHHHTCCSCEEEECSCCCGGGHHHHHHH-CSEEEEE-C--CHHH
T ss_pred HHHHHHHHcCCCEEEE-----ecH---HHHHHHHHhhhhccCCCeEEeecCCCChHHHHHHHHH-CCEEEec-C--CHHH
Confidence 4577888899997632 222 2233333333221001344555322222344444421 4654322 1 1233
Q ss_pred HHHHHHHHHHcCCcEEEE--ECCCC-------CHHHHHHhh------ccCCEEEEEeecCCCCCCccchhHHHHHHHHHH
Q 023494 154 LHRTLNQIKDLGAKAGVV--LNPAT-------SLSAIECVL------DVVDLVLIMSVNPGFGGQSFIESQVKKISDLRR 218 (281)
Q Consensus 154 i~~~l~~ik~~G~k~Gla--i~p~t-------~ie~~~~~l------~~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~ 218 (281)
+.++-+.+.+.|..+-+. +|.+. +.+.+.+++ +.+.+..+|+..|-.....-....+++++++++
T Consensus 110 a~~l~~~a~~~~~~~~V~lqVntG~e~~R~G~~~ee~~~l~~~i~~~~~l~l~Glmt~~~~~~d~~~~~~~f~~l~~l~~ 189 (245)
T 3sy1_A 110 ATRLNDQRPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAELPRLRLRGLSAIPAPESEYVRQFEVARQMAVAFA 189 (245)
T ss_dssp HHHHHHHSCTTSCCEEEEEEBCCSCTTCCSSBCGGGHHHHHHHHTTCTTEEEEEEECCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCceEEEEEECCCCcCCcCCCHHHHHHHHHHHHcCCCCeEEEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 444444455567666555 45431 112333322 235667788754322221122345778888887
Q ss_pred HhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEcccccCCCCH
Q 023494 219 MCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAKDY 263 (281)
Q Consensus 219 l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a~dp 263 (281)
.+.+++..++ .+.+|.+.+ ....++.|++.+=+||+||...++
T Consensus 190 ~l~~~~~~~~-~LSmGmS~d-~~~Ai~~G~t~vRvGt~iFg~r~y 232 (245)
T 3sy1_A 190 GLKTRYPHID-TLALGQSDD-MEAAIAAGSTMVAIGTAIFGARDY 232 (245)
T ss_dssp HHHTTSTTCC-EEECCCSTT-HHHHHHHTCCEEEESHHHHCC---
T ss_pred HHHHhCCCCC-EEeccCcHh-HHHHHHcCCCEEECchHHhCCCCC
Confidence 7766554444 479999874 555688999999999999987554
No 204
>3r89_A Orotidine 5'-phosphate decarboxylase; PSI-biology, midwest center for structural genomics, MCSG, O 5-phosphate decarboxylase, lyase; 1.84A {Anaerococcus prevotii}
Probab=96.67 E-value=0.013 Score=53.30 Aligned_cols=164 Identities=10% Similarity=0.036 Sum_probs=95.7
Q ss_pred cCCHHHHHHcCcC------CCCCeeEEEEecChhh----HHHHHHH--cCCCEEEEcccccccccHHHHHHHHHHcCCcE
Q 023494 101 TIGPLVVDALRPV------TDLPLDVHLMIVEPEQ----RVPDFIK--AGADIVSVHCEQSSTIHLHRTLNQIKDLGAKA 168 (281)
Q Consensus 101 ~~G~~~I~~ir~~------t~~~idaHLmv~dp~~----~i~~~~~--aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~ 168 (281)
.+|++.++.|++. .++++.+|+|..|... |.+.+++ .|+|.+|+|.-.. .+.++.+++.+++.|..+
T Consensus 72 ~~G~~~v~~L~~~i~~~~~~g~~VflDlK~~DIpnTv~~~a~~~~~~~lg~D~vTvh~~~G-~~~l~~~~~~a~~~~kgv 150 (290)
T 3r89_A 72 SYGIEGMIAYRDTLSYLREKDLLSIGDVKRSDIAASAKMYAKAHFEGDFETDFITLNPYMG-MDSIEPYEEYIEKGDKGV 150 (290)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCHHHHHHHHHHHHSGGGCCSEEEECCTTC-GGGTGGGHHHHHTTSCEE
T ss_pred hcCHHHHHHHHHHHHHHHHCCCeEEEEecccCcHHHHHHHHHHHhccccCCCEEEEcccCC-HHHHHHHHHHHHhcCCeE
Confidence 7899988777541 4789999999999874 4555556 7999999997653 455677788888888766
Q ss_pred EEEECCCCCHH-------------------HHHHhhccC----CEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCC
Q 023494 169 GVVLNPATSLS-------------------AIECVLDVV----DLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGV 225 (281)
Q Consensus 169 Glai~p~t~ie-------------------~~~~~l~~v----D~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~ 225 (281)
-+....+.|-. ...++.... .+=.++-|-+.. .| +.++++|+.+++
T Consensus 151 ~vL~~tSn~g~~d~q~~~~~~g~l~~~V~~~a~~~~~~~~g~~~~g~~GvVvgAT-----~p---~e~~~iR~~~~~--- 219 (290)
T 3r89_A 151 FVLLRTSNPGAKDFEVLPVDGEEFFYKVGDKMRELNEKYIGKSGFGPIGLVVGAT-----HS---EEVEKIRKRYDK--- 219 (290)
T ss_dssp EEEEECCSGGGGTTTTCEETTEETHHHHHHHHHHHHGGGCCTTSCEEEEEEECCC-----CH---HHHHHHHHHTTT---
T ss_pred EEEEeCCCCCHHHHhhcccCCCCHHHHHHHHHHHHhhhccCCCCCCceEEEECCC-----Ch---HHHHHHHHhCCC---
Confidence 66554443320 111111111 000111111111 12 345666776653
Q ss_pred CCeEEEecCCChh--cHHHHHHcC---C-cEEEEcccccCC--------CCH----HHHHHHHHHhcCcCc
Q 023494 226 NPWIEVDGGVGPK--NAYKVIEAG---A-NALVAGSAVFGA--------KDY----AEAIKGIKTSKRPQA 278 (281)
Q Consensus 226 ~~~I~VDGGI~~e--~i~~~~~aG---A-D~~VvGSaIf~a--------~dp----~~~~~~l~~~~~~~~ 278 (281)
..| +-.||.++ +...+.+.+ . -++.++++|..+ +|. +++++++++.+....
T Consensus 220 -~~i-L~PGiGaQGg~~~d~~~~~~~g~g~lvn~SR~Il~a~~~~~~~~~~~~~aar~~a~~~~~~~~~~~ 288 (290)
T 3r89_A 220 -MFF-LIPGFGAQKADSMNVYKLLEGLNGGVVNSSRAILKNWQNYEDGSEKVGYYARKKAIETYEEIKANE 288 (290)
T ss_dssp -EEE-EECCCCSSHHHHHHHHTTCBTTBSEEEEECHHHHTGGGGSTTGGGCHHHHHHHHHHHHHHHHHTTC
T ss_pred -CeE-EECCcCCCCCCHHHHHHHHhcCCcEEEECCHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHhhh
Confidence 235 45999976 555555443 2 267777888754 233 355566666665443
No 205
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=96.66 E-value=0.039 Score=49.21 Aligned_cols=131 Identities=18% Similarity=0.256 Sum_probs=85.1
Q ss_pred HHHHHHcCCCEEEEc--------ccccccccHHHHHHHHHHcCCcEEEEECCCCCHHH-------------HHHhhccC-
Q 023494 131 VPDFIKAGADIVSVH--------CEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSA-------------IECVLDVV- 188 (281)
Q Consensus 131 i~~~~~aGAd~Itvh--------~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~-------------~~~~l~~v- 188 (281)
.+++.++|++++.+. .| +++.+.+-++.+.++|+++.+=+.- .++. ++..+..+
T Consensus 81 ~~mL~d~G~~~ViiGHSERR~~f~E--td~~v~~Kv~~Al~~GL~pI~CvGE--tleere~g~t~~vv~~Ql~~~l~~~~ 156 (251)
T 2vxn_A 81 MPILKDIGVHWVILGHSERRTYYGE--TDEIVAQKVSEACKQGFMVIACIGE--TLQQREANQTAKVVLSQTSAIAAKLT 156 (251)
T ss_dssp HHHHHHTTCCEEEESCHHHHHHSCC--CHHHHHHHHHHHHHTTCEEEEEECC--CHHHHHTTCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHcCCCEEEECchhhhcccCC--CHHHHHHHHHHHHHCCCEEEEEcCC--cHHHHhCCCHHHHHHHHHHHHHhcCC
Confidence 678999999999985 44 3456777888899999999887752 3221 22223322
Q ss_pred ----CEEEEEeecC----CCCCCccchhHHH-HHHHHHHHhhhc-----CCCCeEEEecCCChhcHHHH-HHcCCcEEEE
Q 023494 189 ----DLVLIMSVNP----GFGGQSFIESQVK-KISDLRRMCLEK-----GVNPWIEVDGGVGPKNAYKV-IEAGANALVA 253 (281)
Q Consensus 189 ----D~IlvmsV~p----G~~GQ~f~~~~l~-kI~~lr~l~~~~-----~~~~~I~VDGGI~~e~i~~~-~~aGAD~~Vv 253 (281)
.-+ +..-+| |. |..-.|+..+ -.+.+|+.+.+. ..+++|.-.|+|+++|+.++ .+.++|.+-+
T Consensus 157 ~~~~~~~-vIAYEPvWAIGT-G~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LV 234 (251)
T 2vxn_A 157 KDAWNQV-VLAYEPVWAIGT-GKVATPEQAQEVHLLLRKWVSENIGTDVAAKLRILYGGSVNAANAATLYAKPDINGFLV 234 (251)
T ss_dssp TGGGGGE-EEEECCGGGSSS-SCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEEESSCCTTTHHHHHTSTTCCEEEE
T ss_pred HHHhCCE-EEEECCHHHhCC-CCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCcCHhHHHHHhcCCCCCeeee
Confidence 111 224466 43 4444444432 333444443321 11367888999999999866 5689999999
Q ss_pred cccccCCCCHHHHHH
Q 023494 254 GSAVFGAKDYAEAIK 268 (281)
Q Consensus 254 GSaIf~a~dp~~~~~ 268 (281)
|++..+ +|+.+.++
T Consensus 235 GgAsL~-~~F~~Ii~ 248 (251)
T 2vxn_A 235 GGASLK-PEFRDIID 248 (251)
T ss_dssp SGGGGS-TTHHHHHH
T ss_pred cHHHHH-HHHHHHHH
Confidence 999999 88876554
No 206
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=96.65 E-value=0.033 Score=49.80 Aligned_cols=131 Identities=19% Similarity=0.279 Sum_probs=85.6
Q ss_pred HHHHHHcCCCEEEEc--------ccccccccHHHHHHHHHHcCCcEEEEECCCCCHHH-------------HHHhhccC-
Q 023494 131 VPDFIKAGADIVSVH--------CEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSA-------------IECVLDVV- 188 (281)
Q Consensus 131 i~~~~~aGAd~Itvh--------~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~-------------~~~~l~~v- 188 (281)
.+++.++|++++.+. .| +++.+.+=++.+.++|+.+.+=+.- ..+. ++..+..+
T Consensus 80 ~~mL~d~G~~~ViiGHSERR~~f~E--td~~v~~Kv~~Al~~GL~pI~CvGE--tleere~g~t~~vv~~Ql~~~l~~~~ 155 (255)
T 1tre_A 80 AAMLKDIGAQYIIIGHSERRTYHKE--SDELIAKKFAVLKEQGLTPVLCIGE--TEAENEAGKTEEVCARQIDAVLKTQG 155 (255)
T ss_dssp HHHHHHHTCCEEEESCHHHHHHSCC--CHHHHHHHHHHHHHTTCEEEEEECC--CHHHHHTTCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCCEEEECccccccccCC--CHHHHHHHHHHHHHCCCEEEEEcCC--cHHHHhcCCHHHHHHHHHHHHHhcCC
Confidence 678899999999985 44 2455666688889999999887752 3322 22222221
Q ss_pred -C-----EEEEEeecC----CCCCCccchhHHH-HHHHHHHHhhhc----CCCCeEEEecCCChhcHHHHHH-cCCcEEE
Q 023494 189 -D-----LVLIMSVNP----GFGGQSFIESQVK-KISDLRRMCLEK----GVNPWIEVDGGVGPKNAYKVIE-AGANALV 252 (281)
Q Consensus 189 -D-----~IlvmsV~p----G~~GQ~f~~~~l~-kI~~lr~l~~~~----~~~~~I~VDGGI~~e~i~~~~~-aGAD~~V 252 (281)
+ +|.+ +| |. |..-.|+..+ -.+.+|+.+.+. ..+++|.-.|+|+++|+.++.+ .++|.+-
T Consensus 156 ~~~~~~vvIAY---EPvWAIGT-G~~Atpe~a~evh~~IR~~l~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~L 231 (255)
T 1tre_A 156 AAAFEGAVIAY---EPVWAIGT-GKSATPAQAQAVHKFIRDHIAKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGAL 231 (255)
T ss_dssp GGGGTTCEEEE---CCGGGSSS-SCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECSCCCTTTHHHHHTSTTCCEEE
T ss_pred HHHcCcEEEEE---CCHHHhCC-CCCCCHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCCCHHHHHHHHcCCCCCeeE
Confidence 2 3433 55 43 4443444332 233344443210 1136788899999999999987 9999999
Q ss_pred EcccccCCCCHHHHHHH
Q 023494 253 AGSAVFGAKDYAEAIKG 269 (281)
Q Consensus 253 vGSaIf~a~dp~~~~~~ 269 (281)
+|++..+++|+.+.++.
T Consensus 232 VGgAsL~a~~F~~Ii~~ 248 (255)
T 1tre_A 232 VGGASLKADAFAVIVKA 248 (255)
T ss_dssp ESGGGGCHHHHHHHHHH
T ss_pred ecHHHhChHHHHHHHHH
Confidence 99999988877766654
No 207
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=96.63 E-value=0.039 Score=56.15 Aligned_cols=191 Identities=14% Similarity=0.128 Sum_probs=115.5
Q ss_pred CHHHHHHHHHHcCCCe--EEEEeeeC-cc---cccccCCH-HHHHHcCcC-CCCCeeEEEEec-------Ch----hhHH
Q 023494 71 KLGEQVKAVELAGCDW--IHVDVMDG-RF---VPNITIGP-LVVDALRPV-TDLPLDVHLMIV-------EP----EQRV 131 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~--iHiDImDG-~f---vpn~~~G~-~~I~~ir~~-t~~~idaHLmv~-------dp----~~~i 131 (281)
+..+..+.|.+.|+++ |++. =| +| .|.....+ +.++.+++. ++..+.+++... -| ..++
T Consensus 126 dkl~Ia~~Ld~~Gvg~~~IE~g--GGatfd~~~~f~~e~p~e~l~~l~~~~~~~~l~~l~R~~n~vgy~~~p~~~~~~~i 203 (718)
T 3bg3_A 126 DLKKIAPYVAHNFSKLFSMENW--GGATFDVAMRFLYECPWRRLQELRELIPNIPFQMLLRGANAVGYTNYPDNVVFKFC 203 (718)
T ss_dssp HHHHHHHHHHHHCTTCSEEEEE--ETTHHHHHHHTSCCCHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCcEEEec--CCcchhhccccCCCCHHHHHHHHHHHcccchHHHHhcccccccccccCCcchHHHH
Confidence 4445556777776665 5552 11 11 12223344 557777664 556665544321 12 3568
Q ss_pred HHHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCC----------CCHHHHHHhhcc-----CCEEEEEee
Q 023494 132 PDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPA----------TSLSAIECVLDV-----VDLVLIMSV 196 (281)
Q Consensus 132 ~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~----------t~ie~~~~~l~~-----vD~IlvmsV 196 (281)
+.+.++|+|.+.+.......+.+...++++++.|..+-.+++-. ++.+.+.++++. +|.|.+-
T Consensus 204 ~~a~~~Gvd~irIf~s~n~l~~l~~~i~~ak~~G~~v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~l~~~Ga~~I~l~-- 281 (718)
T 3bg3_A 204 EVAKENGMDVFRVFDSLNYLPNMLLGMEAAGSAGGVVEAAISYTGDVADPSRTKYSLQYYMGLAEELVRAGTHILCIK-- 281 (718)
T ss_dssp HHHHHHTCCEEEEECSSCCHHHHHHHHHHHHTTTSEEEEEEECCSCTTCTTCCTTCHHHHHHHHHHHHHHTCSEEEEE--
T ss_pred HHHHhcCcCEEEEEecHHHHHHHHHHHHHHHHcCCeEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEc--
Confidence 88999999998887653234567788899999998877655322 245555555432 6877652
Q ss_pred cCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEE----ecCCChhcHHHHHHcCCcEEEEc----ccccCCCCHHHHHH
Q 023494 197 NPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEV----DGGVGPKNAYKVIEAGANALVAG----SAVFGAKDYAEAIK 268 (281)
Q Consensus 197 ~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~V----DGGI~~e~i~~~~~aGAD~~VvG----SaIf~a~dp~~~~~ 268 (281)
-..|-....++.+.++.+++.++ +.+|.+ |-|....|.-..+++|||.+=.- +.-.++.+.++.+.
T Consensus 282 --DT~G~~~P~~v~~lV~~lk~~~p----~~~I~~H~Hnd~GlAvANslaAveAGa~~VD~ti~GlGertGN~~lE~vv~ 355 (718)
T 3bg3_A 282 --DMAGLLKPTACTMLVSSLRDRFP----DLPLHIHTHDTSGAGVAAMLACAQAGADVVDVAADSMSGMTSQPSMGALVA 355 (718)
T ss_dssp --CTTSCCCHHHHHHHHHHHHHHST----TCCEEEECCCTTSCHHHHHHHHHHTTCSEEEEBCGGGCSTTSCCBHHHHHH
T ss_pred --CcCCCcCHHHHHHHHHHHHHhCC----CCeEEEEECCCccHHHHHHHHHHHhCCCEEEecCcccccccCchhHHHHHH
Confidence 33343333445677788877663 356776 88999889999999999976322 12233445555554
Q ss_pred HHH
Q 023494 269 GIK 271 (281)
Q Consensus 269 ~l~ 271 (281)
.|+
T Consensus 356 ~L~ 358 (718)
T 3bg3_A 356 CTR 358 (718)
T ss_dssp HHT
T ss_pred HHH
Confidence 444
No 208
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=96.62 E-value=0.0085 Score=56.36 Aligned_cols=127 Identities=13% Similarity=0.205 Sum_probs=79.2
Q ss_pred HHHHcCCCEEEEccccc--------cc-----c-----------cHHHHHHHHHHc-CC-cEEEEECCCC---------C
Q 023494 133 DFIKAGADIVSVHCEQS--------ST-----I-----------HLHRTLNQIKDL-GA-KAGVVLNPAT---------S 177 (281)
Q Consensus 133 ~~~~aGAd~Itvh~Ea~--------~~-----~-----------~i~~~l~~ik~~-G~-k~Glai~p~t---------~ 177 (281)
.+.++|.|.|-+|.-.. +. + -+.++++++|+. |. .+++=+++.. +
T Consensus 175 ~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~~~~~ 254 (376)
T 1icp_A 175 NAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEAGDTNP 254 (376)
T ss_dssp HHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCCSCH
T ss_pred HHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCCCC
Confidence 34678999999997420 00 0 156778888874 43 7899898752 2
Q ss_pred HHHHHHh---hc--cCCEEEEEeecCCCCC-CccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcC-CcE
Q 023494 178 LSAIECV---LD--VVDLVLIMSVNPGFGG-QSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAG-ANA 250 (281)
Q Consensus 178 ie~~~~~---l~--~vD~IlvmsV~pG~~G-Q~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aG-AD~ 250 (281)
.+...++ ++ .+|+|-+..- ++.. .+. ....+.++++|+.. +++|.+-|||+++.+.++++.| +|.
T Consensus 255 ~~~~~~la~~le~~Gvd~i~v~~~--~~~~~~~~-~~~~~~~~~vr~~~-----~iPvi~~G~i~~~~a~~~l~~g~aD~ 326 (376)
T 1icp_A 255 TALGLYMVESLNKYDLAYCHVVEP--RMKTAWEK-IECTESLVPMRKAY-----KGTFIVAGGYDREDGNRALIEDRADL 326 (376)
T ss_dssp HHHHHHHHHHHGGGCCSEEEEECC--SCCC-------CCCCSHHHHHHC-----CSCEEEESSCCHHHHHHHHHTTSCSE
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCC--cccCCCCc-cccHHHHHHHHHHc-----CCCEEEeCCCCHHHHHHHHHCCCCcE
Confidence 2222222 22 2888876421 1110 010 00112244455543 3688899999999999999998 999
Q ss_pred EEEcccccCCCCHHHHH
Q 023494 251 LVAGSAVFGAKDYAEAI 267 (281)
Q Consensus 251 ~VvGSaIf~a~dp~~~~ 267 (281)
+-+|++++..++.-..+
T Consensus 327 V~~gR~~l~~P~l~~k~ 343 (376)
T 1icp_A 327 VAYGRLFISNPDLPKRF 343 (376)
T ss_dssp EEESHHHHHCTTHHHHH
T ss_pred EeecHHHHhCccHHHHH
Confidence 99999998777755443
No 209
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=96.59 E-value=0.0037 Score=54.81 Aligned_cols=77 Identities=16% Similarity=0.166 Sum_probs=51.1
Q ss_pred HHHHHHhhcc-CCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcc
Q 023494 178 LSAIECVLDV-VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGS 255 (281)
Q Consensus 178 ie~~~~~l~~-vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGS 255 (281)
.+.++.+.+. +|+|.+...+....++.. .++.++++++. .++++.+.|||+ ++.+..++++|||.+++|+
T Consensus 38 ~~~a~~~~~~G~~~i~v~d~~~~~~~~~~---~~~~i~~i~~~-----~~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~ 109 (247)
T 3tdn_A 38 RDWVVEVEKRGAGEILLTSIDRDGTKSGY---DTEMIRFVRPL-----TTLPIIASGGAGKMEHFLEAFLRGADKVSINT 109 (247)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTCSSCC---CHHHHHHHGGG-----CCSCEEEESCCCSHHHHHHHHHTTCSEECCSH
T ss_pred HHHHHHHHHcCCCEEEEEecCcccCCCcc---cHHHHHHHHHh-----CCCCEEEeCCCCCHHHHHHHHHcCCCeeehhh
Confidence 3444444443 777776555443333322 23445544432 357899999999 7899999999999999999
Q ss_pred cccCCCC
Q 023494 256 AVFGAKD 262 (281)
Q Consensus 256 aIf~a~d 262 (281)
+.+..++
T Consensus 110 ~~l~dp~ 116 (247)
T 3tdn_A 110 AAVENPS 116 (247)
T ss_dssp HHHHCTH
T ss_pred HHhhChH
Confidence 9885443
No 210
>1b9b_A TIM, protein (triosephosphate isomerase); thermophilic; 2.85A {Thermotoga maritima} SCOP: c.1.1.1
Probab=96.55 E-value=0.012 Score=52.69 Aligned_cols=129 Identities=16% Similarity=0.216 Sum_probs=84.9
Q ss_pred HHHHHHcCCCEEEEc--------ccccccccHHHHHHHHHHcCCcEEEEECCCCCHHH-------------HHHhhccC-
Q 023494 131 VPDFIKAGADIVSVH--------CEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSA-------------IECVLDVV- 188 (281)
Q Consensus 131 i~~~~~aGAd~Itvh--------~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~-------------~~~~l~~v- 188 (281)
.+++.++|++++.+. .| +++.+.+=++.+.++|+++.+=+. ..++. ++..+..+
T Consensus 81 ~~mL~d~G~~~ViiGHSERR~~f~E--td~~v~~Kv~~Al~~GL~pI~CvG--Etleere~g~t~~vv~~Ql~~~l~~~~ 156 (255)
T 1b9b_A 81 PLMLQEIGVEYVIVGHSERRRIFKE--DDEFINRKVKAVLEKGMTPILCVG--ETLEEREKGLTFCVVEKQVREGFYGLD 156 (255)
T ss_dssp HHHHHTTTCCEEEESCHHHHHTSCC--CHHHHHHHHHHHHHTTCEEEEEEC--CCHHHHHHTCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHcCCCEEEECchhhccccCC--CHHHHHHHHHHHHHCCCEEEEEcC--CcHHHHhcCCHHHHHHHHHHHHHhcCC
Confidence 678899999999985 34 245566668888999999888774 23322 22233322
Q ss_pred ------CEEEEEeecC----CCCCCccchhHH-HHHHHHHHHhhhc-----CCCCeEEEecCCChhcHHHHH-HcCCcEE
Q 023494 189 ------DLVLIMSVNP----GFGGQSFIESQV-KKISDLRRMCLEK-----GVNPWIEVDGGVGPKNAYKVI-EAGANAL 251 (281)
Q Consensus 189 ------D~IlvmsV~p----G~~GQ~f~~~~l-~kI~~lr~l~~~~-----~~~~~I~VDGGI~~e~i~~~~-~aGAD~~ 251 (281)
.+|. -+| |. |..-.|+.. +-.+.+|+.+.+. ..+++|.-.|+|+++|+.++. +.++|.+
T Consensus 157 ~~~~~~~vIA---YEPvWAIGT-G~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~ 232 (255)
T 1b9b_A 157 KEEAKRVVIA---YEPVWAIGT-GRVATPQQAQEVHAFIRKLLSEMYDEETAGSIRILYGGSIKPDNFLGLIVQKDIDGG 232 (255)
T ss_dssp HHHHTTCEEE---ECCGGGSSS-SCCCCHHHHHHHHHHHHHHHHHHSCHHHHHHSEEEEESSCCHHHHTTTSSSTTCCEE
T ss_pred HHHcCCEEEE---ECCHHHhCC-CCCCCHHHHHHHHHHHHHHHHHhcCccccCcceEEEcCcCCHHHHHHHHcCCCCCee
Confidence 2333 366 43 444444433 3334445543321 113678889999999999887 8999999
Q ss_pred EEcccccCCC--CHHHHH
Q 023494 252 VAGSAVFGAK--DYAEAI 267 (281)
Q Consensus 252 VvGSaIf~a~--dp~~~~ 267 (281)
-+|++..+++ |+.+.+
T Consensus 233 LVGgASLka~~~~F~~ii 250 (255)
T 1b9b_A 233 LVGGASLKESFIELARIM 250 (255)
T ss_dssp EESGGGTSTHHHHHHHHH
T ss_pred EeehHhhcCccccHHHHH
Confidence 9999999887 776544
No 211
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=96.53 E-value=0.016 Score=51.19 Aligned_cols=129 Identities=16% Similarity=0.177 Sum_probs=81.5
Q ss_pred HHHHHHcCCCEEEEc--------ccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHH-----------hhccC--C
Q 023494 131 VPDFIKAGADIVSVH--------CEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIEC-----------VLDVV--D 189 (281)
Q Consensus 131 i~~~~~aGAd~Itvh--------~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~-----------~l~~v--D 189 (281)
.+++.++|++++.+. .| +++.+.+-++.+.++|+++.+=+.- ..+.-+. -+..+ +
T Consensus 74 ~~mL~d~G~~~ViiGHSERR~~f~E--td~~v~~Kv~~Al~~GL~pI~CvGE--tleere~g~~~t~~vv~~Ql~~l~~~ 149 (233)
T 2jgq_A 74 SKHLEELKIHTLLIGHSERRTLLKE--SPSFLKEKFDFFKSKNFKIVYCIGE--ELTTREKGFKAVKEFLSEQLENIDLN 149 (233)
T ss_dssp HHHHHHTTCCEEEECCHHHHHTTCC--CHHHHHHHHHHHHHTTCEEEEEECC--CHHHHHHCHHHHHHHHHHHHTTSCTT
T ss_pred HHHHHHcCCCEEEeCchhhhcccCC--CHHHHHHHHHHHHHCCCEEEEEcCC--cHHHHhcCchhHHHHHHHHHHhhhhh
Confidence 578899999999885 34 3456777888899999999887752 3321111 11111 1
Q ss_pred --EEEEEeecCCC---CCCccchhHHH-HHHHHHHHhhhcCCCCeEEEecCCChhcHHHH-HHcCCcEEEEcccccCCCC
Q 023494 190 --LVLIMSVNPGF---GGQSFIESQVK-KISDLRRMCLEKGVNPWIEVDGGVGPKNAYKV-IEAGANALVAGSAVFGAKD 262 (281)
Q Consensus 190 --~IlvmsV~pG~---~GQ~f~~~~l~-kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~-~~aGAD~~VvGSaIf~a~d 262 (281)
- ++..-+|=+ +|..-.|+..+ -.+.+|+.+. .+++|.-.|+|+++|+.++ .+.++|.+-+|++..+++|
T Consensus 150 ~~~-~vIAYEPvWAIGTG~~At~e~a~ev~~~IR~~l~---~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsl~a~~ 225 (233)
T 2jgq_A 150 YPN-LVVAYEPIWAIGTKKSASLEDIYLTHGFLKQILN---QKTPLLYGGSVNTQNAKEILGIDSVDGLLIGSASWELEN 225 (233)
T ss_dssp CTT-EEEEECCGGGTTC--CCCHHHHHHHHHHHHHHSC---TTSCEEEESSCCTTTHHHHHTSTTCCEEEESGGGGSHHH
T ss_pred ccc-eEEEEeCHHHhCCCCCCCHHHHHHHHHHHHHHHh---cCCcEEEcCCcChhhHHHHhcCCCCCeeEecHHHhChHH
Confidence 1 122446622 35444444332 2334444432 2478888999999999975 5789999999999998776
Q ss_pred HHHHH
Q 023494 263 YAEAI 267 (281)
Q Consensus 263 p~~~~ 267 (281)
+.+.+
T Consensus 226 f~~ii 230 (233)
T 2jgq_A 226 FKTII 230 (233)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
No 212
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=96.50 E-value=0.0017 Score=58.77 Aligned_cols=73 Identities=16% Similarity=0.171 Sum_probs=51.9
Q ss_pred EEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEE--ecChhhHHHHHHHcCC
Q 023494 62 PSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLM--IVEPEQRVPDFIKAGA 139 (281)
Q Consensus 62 pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLm--v~dp~~~i~~~~~aGA 139 (281)
|+++..+..+ .+.++.+.++|+|++ ||+|.++. +++++.+++. .+++|+| +.+|..+.. +.++|+
T Consensus 80 Pvi~~~~~~~-~~~~~~~~~aGad~v-----~~~~~~~~---~~~~~~~~~~---~~~i~l~~~v~~~~~~~~-a~~~Ga 146 (297)
T 2zbt_A 80 PVMAKVRIGH-FVEAMILEAIGVDFI-----DESEVLTP---ADEEHHIDKW---KFKVPFVCGARNLGEALR-RIAEGA 146 (297)
T ss_dssp CEEEEEETTC-HHHHHHHHHTTCSEE-----EEETTSCC---SCSSCCCCGG---GCSSCEEEEESSHHHHHH-HHHTTC
T ss_pred CeEEEeccCC-HHHHHHHHHCCCCEE-----eeeCCCCh---HHHHHHHHHh---CCCceEEeecCCHHHHHH-HHHcCC
Confidence 5555555544 678999999999998 56666543 3455666553 2477888 778887654 689999
Q ss_pred CEEEEccc
Q 023494 140 DIVSVHCE 147 (281)
Q Consensus 140 d~Itvh~E 147 (281)
|+|.+|.+
T Consensus 147 d~I~v~G~ 154 (297)
T 2zbt_A 147 AMIRTKGE 154 (297)
T ss_dssp SEEEECCC
T ss_pred CEEEEccc
Confidence 99999954
No 213
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Probab=96.49 E-value=0.027 Score=50.48 Aligned_cols=131 Identities=19% Similarity=0.231 Sum_probs=85.9
Q ss_pred HHHHHHcCCCEEEEc--------ccccccccHHHHHHHHHHcCCcEEEEECCCCCHH-------------HHHHhhccCC
Q 023494 131 VPDFIKAGADIVSVH--------CEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLS-------------AIECVLDVVD 189 (281)
Q Consensus 131 i~~~~~aGAd~Itvh--------~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie-------------~~~~~l~~vD 189 (281)
.+++.++|++++.+. .| +++.+.+-++.+.++|+.+.+=+.- ..+ .++..++.++
T Consensus 79 ~~mL~d~G~~~ViiGHSERR~~f~E--td~~v~~Kv~~Al~~GL~pIvCvGE--tleere~g~t~~vv~~Ql~~~l~~~~ 154 (259)
T 2i9e_A 79 PAMIKDVGADWVILGHSERRQIFGE--SDELIAEKVCHALESGLKVIACIGE--TLEEREAGKTEEVVFRQTKAIAAKVN 154 (259)
T ss_dssp HHHHHHTTCCEEEESCHHHHHTSCC--CHHHHHHHHHHHHHTTCEEEEEECC--CHHHHHTTCHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHcCCCEEEECchhhhhhcCC--CHHHHHHHHHHHHHCCCeEEEEcCC--cHHHHhcCCHHHHHHHHHHHHHhcch
Confidence 678999999999986 44 3566888888999999999887753 332 1333332211
Q ss_pred ---EEEEEeecC----CCCCCccchhHH-HHHHHHHHHhhhc-----CCCCeEEEecCCChhcHHHH-HHcCCcEEEEcc
Q 023494 190 ---LVLIMSVNP----GFGGQSFIESQV-KKISDLRRMCLEK-----GVNPWIEVDGGVGPKNAYKV-IEAGANALVAGS 255 (281)
Q Consensus 190 ---~IlvmsV~p----G~~GQ~f~~~~l-~kI~~lr~l~~~~-----~~~~~I~VDGGI~~e~i~~~-~~aGAD~~VvGS 255 (281)
-+ +..-+| | +|..-.|+.. +-.+.+|+.+.+. ..+++|.-.|+|+++|+.++ .+.++|.+-+|+
T Consensus 155 ~~~~~-vIAYEPvWAIG-TG~~Atpe~aqevh~~IR~~l~~~~~~~va~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGg 232 (259)
T 2i9e_A 155 DWSNV-VIAYEPVWAIG-TGKTATPQQAQDVHKALRQWICENIDAKVGNSIRIQYGGSVTAANCKELASQPDIDGFLVGG 232 (259)
T ss_dssp CCTTE-EEEECCGGGTT-SSSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEECSCCCTTTHHHHHTSTTCCEEEESG
T ss_pred hhcCE-EEEEcCHHHcC-CCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCCCHhhHHHHhcCCCCCeeeech
Confidence 11 223466 4 3544444443 3334445444321 11367888999999999876 468999999999
Q ss_pred cccCCCCHHHHH
Q 023494 256 AVFGAKDYAEAI 267 (281)
Q Consensus 256 aIf~a~dp~~~~ 267 (281)
+..+++|+.+.+
T Consensus 233 AsL~a~~F~~Ii 244 (259)
T 2i9e_A 233 ASLKPEFVDIIN 244 (259)
T ss_dssp GGGSTHHHHHHT
T ss_pred HhhChHHHHHHH
Confidence 999988776544
No 214
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=96.47 E-value=0.024 Score=50.52 Aligned_cols=130 Identities=16% Similarity=0.174 Sum_probs=82.9
Q ss_pred HHHHHHcCCCEEEEc--------ccccccccHHHHHHHHHHcCCcEEEEECCCCCHHH-------------HHHhhccCC
Q 023494 131 VPDFIKAGADIVSVH--------CEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSA-------------IECVLDVVD 189 (281)
Q Consensus 131 i~~~~~aGAd~Itvh--------~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~-------------~~~~l~~vD 189 (281)
.+++.++|++++.+. .| +++.+.+-++.+.++|+++.+=+.- ..+. ++..+..++
T Consensus 80 ~~mL~d~G~~~ViiGHSERR~~f~E--td~~v~~Kv~~Al~~GL~pI~CvGE--tleere~g~t~~vv~~Ql~~~l~~~~ 155 (248)
T 1r2r_A 80 PGMIKDCGATWVVLGHSERRHVFGE--SDELIGQKVAHALSEGLGVIACIGE--KLDEREAGITEKVVFEQTKVIADNVK 155 (248)
T ss_dssp HHHHHHTTCCEEEESCHHHHHTSCC--CHHHHHHHHHHHHHTTCEEEEEECC--CHHHHHTTCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHcCCCEEEECChhhhcccCC--CHHHHHHHHHHHHHCCCEEEEEcCC--cHHHHhCCChHHHHHHHHHHHHhhhh
Confidence 678999999999985 34 3456777888889999999887752 3322 111222111
Q ss_pred ---EEEEEeecC----CCCCCccchhHH-HHHHHHHHHhhhc-----CCCCeEEEecCCChhcHHHH-HHcCCcEEEEcc
Q 023494 190 ---LVLIMSVNP----GFGGQSFIESQV-KKISDLRRMCLEK-----GVNPWIEVDGGVGPKNAYKV-IEAGANALVAGS 255 (281)
Q Consensus 190 ---~IlvmsV~p----G~~GQ~f~~~~l-~kI~~lr~l~~~~-----~~~~~I~VDGGI~~e~i~~~-~~aGAD~~VvGS 255 (281)
-+ +..-+| |. |..-.|+.. +-.+.+|+.+.+. ..+++|.-.|+|+++|+.++ .+.++|.+-+|+
T Consensus 156 ~~~~~-vIAYEPvWAIGT-G~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGg 233 (248)
T 1r2r_A 156 DWSKV-VLAYEPVWAIGT-GKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGG 233 (248)
T ss_dssp CGGGE-EEEECCGGGSSS-SCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEECSCCCTTTHHHHHTSTTCCEEEESG
T ss_pred hhhce-EEEEecHHhhCC-CCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCcCHhHHHHHHcCCCCCeeEech
Confidence 11 123366 43 444444443 2334444444321 11367888999999999866 568999999999
Q ss_pred cccCCCCHHHH
Q 023494 256 AVFGAKDYAEA 266 (281)
Q Consensus 256 aIf~a~dp~~~ 266 (281)
+..+++|+.+.
T Consensus 234 AsL~a~~F~~i 244 (248)
T 1r2r_A 234 ASLKPEFVDII 244 (248)
T ss_dssp GGGSTHHHHHH
T ss_pred HHhChHHHHHH
Confidence 99988776543
No 215
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=96.46 E-value=0.054 Score=50.81 Aligned_cols=137 Identities=18% Similarity=0.221 Sum_probs=83.7
Q ss_pred CCCCCeeEEEEe------cChhhHHHH-HHHcCCCEEEEccccc---------ccc--cHHHHHHHHHHc-CCcEEEE-E
Q 023494 113 VTDLPLDVHLMI------VEPEQRVPD-FIKAGADIVSVHCEQS---------STI--HLHRTLNQIKDL-GAKAGVV-L 172 (281)
Q Consensus 113 ~t~~~idaHLmv------~dp~~~i~~-~~~aGAd~Itvh~Ea~---------~~~--~i~~~l~~ik~~-G~k~Gla-i 172 (281)
.++.++.+-+-. .++. ++.. ...++++...+|.... ... ...+.++.+++. ++.+.+- +
T Consensus 117 ap~~~~~anlg~~ql~~~~~~~-~~~~av~~~~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~~vPVivK~v 195 (368)
T 3vkj_A 117 APTIPIIANLGMPQLVKGYGLK-EFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKELSVPIIVKES 195 (368)
T ss_dssp CSSSCEEEEEEGGGGGTTCCHH-HHHHHHHHTTCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTCSSCEEEECS
T ss_pred CcCcceecCcCeeecCCCCCHH-HHHHHHHHhcCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHcCCCEEEEeC
Confidence 366777777666 2233 3433 3345777777775311 011 256677887765 6666664 3
Q ss_pred CCCCCHHHHHHhhc-cCCEEEEEeecCCCCCCccc-------------------------hhHHHHHHHHHHHhhhcCCC
Q 023494 173 NPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFI-------------------------ESQVKKISDLRRMCLEKGVN 226 (281)
Q Consensus 173 ~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f~-------------------------~~~l~kI~~lr~l~~~~~~~ 226 (281)
......+..+.+.+ .+|.|.+- |.+|+.|. .-+..-|.++++..+ +
T Consensus 196 G~g~s~~~A~~l~~aGad~I~V~----g~GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l~~v~~~~~----~ 267 (368)
T 3vkj_A 196 GNGISMETAKLLYSYGIKNFDTS----GQGGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYSVP----D 267 (368)
T ss_dssp SSCCCHHHHHHHHHTTCCEEECC----CBTSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHHHHHHHST----T
T ss_pred CCCCCHHHHHHHHhCCCCEEEEe----CCCCCcccchhhhhcccccccchhhccccccccccHHHHHHHHHHHcC----C
Confidence 22335566666655 38999752 22443332 011233445555432 3
Q ss_pred CeEEEecCCC-hhcHHHHHHcCCcEEEEccccc
Q 023494 227 PWIEVDGGVG-PKNAYKVIEAGANALVAGSAVF 258 (281)
Q Consensus 227 ~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf 258 (281)
++|.++|||. ...+.+.+.+|||.+-+|+.++
T Consensus 268 ipvia~GGI~~~~d~~kal~lGA~~v~ig~~~l 300 (368)
T 3vkj_A 268 SFLVGSGGIRSGLDAAKAIALGADIAGMALPVL 300 (368)
T ss_dssp CEEEEESSCCSHHHHHHHHHHTCSEEEECHHHH
T ss_pred CcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHH
Confidence 7899999998 7889999999999999999865
No 216
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=96.38 E-value=0.0045 Score=55.35 Aligned_cols=70 Identities=16% Similarity=0.218 Sum_probs=46.0
Q ss_pred CCHHHHHHhhcc-CCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEc
Q 023494 176 TSLSAIECVLDV-VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAG 254 (281)
Q Consensus 176 t~ie~~~~~l~~-vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvG 254 (281)
.|++..+.|.+. +|.+.+.-.++ ..++-|+++.+.. ..+++++|||+.+++..++ +|||.+++|
T Consensus 39 dp~~~A~~~~~~Ga~~l~vvDL~~---------~n~~~i~~i~~~~-----~~pv~vgGGir~~~~~~~l-~Ga~~Viig 103 (260)
T 2agk_A 39 PSSYYAKLYKDRDVQGCHVIKLGP---------NNDDAAREALQES-----PQFLQVGGGINDTNCLEWL-KWASKVIVT 103 (260)
T ss_dssp CHHHHHHHHHHTTCTTCEEEEESS---------SCHHHHHHHHHHS-----TTTSEEESSCCTTTHHHHT-TTCSCEEEC
T ss_pred CHHHHHHHHHHcCCCEEEEEeCCC---------CCHHHHHHHHhcC-----CceEEEeCCCCHHHHHHHh-cCCCEEEEC
Confidence 455555544332 45544443442 1233445554432 3678899999977999999 999999999
Q ss_pred ccccCC
Q 023494 255 SAVFGA 260 (281)
Q Consensus 255 SaIf~a 260 (281)
|+.++.
T Consensus 104 s~a~~~ 109 (260)
T 2agk_A 104 SWLFTK 109 (260)
T ss_dssp GGGBCT
T ss_pred cHHHhh
Confidence 999964
No 217
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=96.33 E-value=0.24 Score=44.11 Aligned_cols=191 Identities=15% Similarity=0.196 Sum_probs=126.0
Q ss_pred cCHHHHHHHHHHcCCCeEEEEeeeCcccccc-cCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEcccc
Q 023494 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNI-TIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQ 148 (281)
Q Consensus 70 ~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~-~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea 148 (281)
-+.-++...++++| |-|-+ |--|.- -.-..-+..||+....++...+-. ..++++.+.+...+.||+-.|.
T Consensus 25 Pdpv~aA~~ae~aG-dgITv-----HlReDrRHI~d~Dv~~L~~~~~~~lNlE~a~--t~emi~ial~~kP~~vtLVPEk 96 (260)
T 3o6c_A 25 PDLLEAAFIVARHG-DQITL-----HVREDRRHAQDFDLENIIKFCKSPVNLECAL--NDEILNLALKLKPHRVTLVPEK 96 (260)
T ss_dssp SCHHHHHHHHHHHS-SEEEE-----ECCTTCSSSCHHHHHHHHHHCSSCEEEEECS--CHHHHHHHHHHCCSEEEECCCS
T ss_pred CCHHHHHHHHHHhC-CeEEE-----eeCCCcccCCHHHHHHHHHHcCCCEEeecCC--CHHHHHHHHHcCCCEEEECCCC
Confidence 35556677788899 98543 111221 234456777777655666664433 3458888899999999999874
Q ss_pred c-----------ccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCCCCcc-----------
Q 023494 149 S-----------STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSF----------- 205 (281)
Q Consensus 149 ~-----------~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f----------- 205 (281)
. ..+.+..+++.+++.|+++.+.+.|. .+.++.-.+ .+|+|-+.|- .....+
T Consensus 97 reE~TTegGldv~~~~L~~~i~~L~~~GIrVSLFIDpd--~~qi~aA~~~GAd~IELhTG---~YA~a~~~~~sn~~~~~ 171 (260)
T 3o6c_A 97 REELTTEGGLCLNHAKLKQSIEKLQNANIEVSLFINPS--LEDIEKSKILKAQFIELHTG---HYANLHNALFSNISHTA 171 (260)
T ss_dssp GGGBCTTSSBCTTCTTHHHHHHHHHHTTCEEEEEECSC--HHHHHHHHHTTCSEEEECCH---HHHHHHHHHHSSGGGST
T ss_pred CCccCCCCChhhCHHHHHHHHHHHHHCCCEEEEEeCCC--HHHHHHHHHhCCCEEEEech---Hhhhhhhcccccccccc
Confidence 2 12347889999999999999999874 333443322 4899977543 111111
Q ss_pred ----------------chhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHH-cCCcEEEEcccccCC---CCHHH
Q 023494 206 ----------------IESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIE-AGANALVAGSAVFGA---KDYAE 265 (281)
Q Consensus 206 ----------------~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~-aGAD~~VvGSaIf~a---~dp~~ 265 (281)
...-+++|.+..+.-.+ .++.+...-|+|.+|++.+.+ -+..=+-+|-+|+.. --.++
T Consensus 172 ~~~~~l~~~~~~~~~~~~~el~~l~~aA~~A~~--lGL~VnAGHGL~y~Nv~~ia~ip~i~ElnIGHaiIa~Al~~Gl~~ 249 (260)
T 3o6c_A 172 FALKELDQDKKTLQAQFEKELQNLELCAKKGLE--LGLKVAAGHGLNYKNVKPVVKIKEICELNIGQSIVARSVFTGLQN 249 (260)
T ss_dssp TCCGGGCSCHHHHHHHHHHHHHHHHHHHHHHHH--TTCEEEECTTCCTTTTHHHHTCTTCCEEEECHHHHHHHHHHCHHH
T ss_pred ccccccccccchhhHHHHHHHHHHHHHHHHHHH--cCCEEecCCCCCHHHHHHHHhCCCCeEEecCHHHHHHHHHHhHHH
Confidence 12235555555555444 457888999999999998754 356778899887742 24678
Q ss_pred HHHHHHHhcC
Q 023494 266 AIKGIKTSKR 275 (281)
Q Consensus 266 ~~~~l~~~~~ 275 (281)
++++|++.++
T Consensus 250 AV~~m~~l~~ 259 (260)
T 3o6c_A 250 AILEMKELIK 259 (260)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHhc
Confidence 8888888764
No 218
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=96.33 E-value=0.068 Score=48.46 Aligned_cols=185 Identities=15% Similarity=0.099 Sum_probs=107.9
Q ss_pred CHHHHHHHHHHcCCCeEEEEeeeCcccccccC-CHHHHHHcCcC-CCCCeeEEEEecChhhHHHHHHH----cCCCEEEE
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITI-GPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIK----AGADIVSV 144 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~-G~~~I~~ir~~-t~~~idaHLmv~dp~~~i~~~~~----aGAd~Itv 144 (281)
+-.+.++.|.+.|+++|++- | |...- ..+.++.+++. .+..+-+..- .+ .+-++.+.+ +|++.|++
T Consensus 28 ~K~~i~~~L~~~Gv~~IE~g-----~-p~~~~~d~e~v~~i~~~~~~~~i~~l~~-~~-~~di~~a~~~~~~ag~~~v~i 99 (293)
T 3ewb_X 28 EKIQIALQLEKLGIDVIEAG-----F-PISSPGDFECVKAIAKAIKHCSVTGLAR-CV-EGDIDRAEEALKDAVSPQIHI 99 (293)
T ss_dssp HHHHHHHHHHHHTCSEEEEE-----C-GGGCHHHHHHHHHHHHHCCSSEEEEEEE-SS-HHHHHHHHHHHTTCSSEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEe-----C-CCCCccHHHHHHHHHHhcCCCEEEEEec-CC-HHHHHHHHHHHhhcCCCEEEE
Confidence 44456677888999998883 2 32211 12456666543 4444544322 22 223444444 68898887
Q ss_pred cccccccc---------------cHHHHHHHHHHcCCcEEEEEC--CCCCHHHHHHhhcc-----CCEEEEEeecCCCCC
Q 023494 145 HCEQSSTI---------------HLHRTLNQIKDLGAKAGVVLN--PATSLSAIECVLDV-----VDLVLIMSVNPGFGG 202 (281)
Q Consensus 145 h~Ea~~~~---------------~i~~~l~~ik~~G~k~Glai~--p~t~ie~~~~~l~~-----vD~IlvmsV~pG~~G 202 (281)
..-.. .. .+.+.++.+|+.|.++.+.+. +.++.+.+.++.+. +|.|.+- ...|
T Consensus 100 ~~~~S-d~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~----DT~G 174 (293)
T 3ewb_X 100 FLATS-DVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPEDATRSDRAFLIEAVQTAIDAGATVINIP----DTVG 174 (293)
T ss_dssp EEECS-HHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEETGGGSCHHHHHHHHHHHHHTTCCEEEEE----CSSS
T ss_pred EecCc-HHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccCCCCCHHHHHHHHHHHHHcCCCEEEec----CCCC
Confidence 65431 11 246778888999999877554 23566665555442 6777552 2334
Q ss_pred CccchhHHHHHHHHHHHhhhcCCCCeEEE----ecCCChhcHHHHHHcCCcEEEEccccc------CCCCHHHHHHHHH
Q 023494 203 QSFIESQVKKISDLRRMCLEKGVNPWIEV----DGGVGPKNAYKVIEAGANALVAGSAVF------GAKDYAEAIKGIK 271 (281)
Q Consensus 203 Q~f~~~~l~kI~~lr~l~~~~~~~~~I~V----DGGI~~e~i~~~~~aGAD~~VvGSaIf------~a~dp~~~~~~l~ 271 (281)
-....++.+.++.+++.++.. .+.+|.+ |-|....|.-..+++||+.| =+++. ++.+.++.+..|+
T Consensus 175 ~~~P~~v~~lv~~l~~~~~~~-~~~~l~~H~Hnd~Gla~AN~laA~~aGa~~v--d~sv~GlGeraGN~~~E~vv~~L~ 250 (293)
T 3ewb_X 175 YTNPTEFGQLFQDLRREIKQF-DDIIFASHCHDDLGMATANALAAIENGARRV--EGTINGIGERAGNTALEEVAVALH 250 (293)
T ss_dssp CCCHHHHHHHHHHHHHHCTTG-GGSEEEEECBCTTSCHHHHHHHHHHTTCCEE--EEBGGGCCTTTCBCBHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCc-cCceEEEEeCCCcChHHHHHHHHHHhCCCEE--EeeccccccccccHhHHHHHHHHH
Confidence 333344556677777765421 0145776 78888889999999999965 33333 2344555555554
No 219
>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, I structural genomics; 1.55A {Cryptosporidium parvum iowa II}
Probab=96.30 E-value=0.1 Score=47.06 Aligned_cols=131 Identities=20% Similarity=0.239 Sum_probs=84.6
Q ss_pred HHHHHHcCCCEEEEc--------ccccccccHHHHHHHHHHcCCcEEEEECCCCCHH-------------HHHHhhccCC
Q 023494 131 VPDFIKAGADIVSVH--------CEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLS-------------AIECVLDVVD 189 (281)
Q Consensus 131 i~~~~~aGAd~Itvh--------~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie-------------~~~~~l~~vD 189 (281)
.+++.++|+++|.+. .| +++.+.+-++.+.++|+++.+-+.- .++ .+...++.++
T Consensus 103 ~~mLkd~G~~~ViiGHSERR~~f~E--tde~v~~Kv~~Al~~GL~pIlCVGE--tleere~g~t~~vv~~Ql~~~l~~v~ 178 (271)
T 3krs_A 103 CEMLKDMDVDCSLVGHSERRQYYSE--TDQIVNNKVKKGLENGLKIVLCIGE--SLSERETGKTNDVIQKQLTEALKDVS 178 (271)
T ss_dssp HHHHHHTTCCEEEESCHHHHHHSCC--CHHHHHHHHHHHHHTTCEEEEEECC--CHHHHHTTCHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHcCCCEEEECchhhccccCC--CHHHHHHHHHHHHHCCCeEEEEeCC--cHHHHHCCCHHHHHHHHHHHHHhchH
Confidence 678899999999985 45 3456777788899999999887752 332 2233333221
Q ss_pred ---EEEEEeecCCC---CCCccchhHHHH-HHHHHHHhhhc-----CCCCeEEEecCCChhcHHHHH-HcCCcEEEEccc
Q 023494 190 ---LVLIMSVNPGF---GGQSFIESQVKK-ISDLRRMCLEK-----GVNPWIEVDGGVGPKNAYKVI-EAGANALVAGSA 256 (281)
Q Consensus 190 ---~IlvmsV~pG~---~GQ~f~~~~l~k-I~~lr~l~~~~-----~~~~~I~VDGGI~~e~i~~~~-~aGAD~~VvGSa 256 (281)
-+ +..-+|=+ +|..-.|+..+. .+.+|+.+.+. ..+++|.-.|+|+++|+.++. +.++|.+-+|++
T Consensus 179 ~~~~~-vIAYEPvWAIGTG~tAtpe~aqevh~~IR~~l~~~~~~~~a~~vrILYGGSV~~~N~~el~~~~diDG~LVGgA 257 (271)
T 3krs_A 179 DLSNL-VIAYEPIWAIGTGVVATPGQAQEAHAFIREYVTRMYNPQVSSNLRIIYGGSVTPDNCNELIKCADIDGFLVGGA 257 (271)
T ss_dssp CCTTE-EEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHSCHHHHHHCCEEECSCCCTTTHHHHHHSTTCCEEEESGG
T ss_pred hhcCE-EEEECChhhhcCCCCCCHHHHHHHHHHHHHHHHHhcChhhcCCccEEEcCCcCHHHHHHHhcCCCCCEEEeeHH
Confidence 11 22336632 355555555433 34455554321 113678899999999999764 688999999999
Q ss_pred ccCCCCHHHHH
Q 023494 257 VFGAKDYAEAI 267 (281)
Q Consensus 257 If~a~dp~~~~ 267 (281)
-.+ ++..+.+
T Consensus 258 SL~-~~F~~Ii 267 (271)
T 3krs_A 258 SLK-PTFAKII 267 (271)
T ss_dssp GGS-TTHHHHH
T ss_pred hhh-HHHHHHH
Confidence 887 5655443
No 220
>3ta6_A Triosephosphate isomerase; HET: FLC; 1.41A {Mycobacterium tuberculosis} SCOP: c.1.1.0 PDB: 3tao_A* 3gvg_A
Probab=96.15 E-value=0.13 Score=46.28 Aligned_cols=130 Identities=15% Similarity=0.167 Sum_probs=83.7
Q ss_pred HHHHHHcCCCEEEEc--------ccccccccHHHHHHHHHHcCCcEEEEECCCCCHHH-------------HHHhhccCC
Q 023494 131 VPDFIKAGADIVSVH--------CEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSA-------------IECVLDVVD 189 (281)
Q Consensus 131 i~~~~~aGAd~Itvh--------~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~-------------~~~~l~~vD 189 (281)
.+++.++|+++|.+. .| +++.+.+-++.+.++|+++.+-+.- .++. ++..+..++
T Consensus 85 ~~mLkd~G~~~ViiGHSERR~~f~E--tde~V~~Kv~~Al~~GL~pIlCvGE--tleeReag~t~~vv~~Ql~~~l~~l~ 160 (267)
T 3ta6_A 85 GAFLAKLGCSYVVVGHSERRTYHNE--DDALVAAKAATALKHGLTPIVCIGE--HLDVREAGNHVAHNIEQLRGSLAGLL 160 (267)
T ss_dssp HHHHHHTTCCEEEESCHHHHHHTTC--CHHHHHHHHHHHHHTTCEEEEEECC--CHHHHHTTCHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHcCCCEEEEcchhhccccCC--CHHHHHHHHHHHHHCCCeEEEEeCC--CHHHHhCCCHHHHHHHHHHHHHhcCC
Confidence 678899999999985 44 2455667788889999999887752 3322 222333332
Q ss_pred -------EEEEEeecCCC---CCCccchhHH-HHHHHHHHHhhhc-----CCCCeEEEecCCChhcHHHHH-HcCCcEEE
Q 023494 190 -------LVLIMSVNPGF---GGQSFIESQV-KKISDLRRMCLEK-----GVNPWIEVDGGVGPKNAYKVI-EAGANALV 252 (281)
Q Consensus 190 -------~IlvmsV~pG~---~GQ~f~~~~l-~kI~~lr~l~~~~-----~~~~~I~VDGGI~~e~i~~~~-~aGAD~~V 252 (281)
+|. -+|=+ +|..-.|+.. +-.+.+|+.+.+. ..+++|.=.|+++++|+.++. +..+|.+-
T Consensus 161 ~~~~~~vvIA---YEPVWAIGTG~tAtpe~aqevh~~IR~~l~~~~~~~~a~~~rIlYGGSV~~~N~~el~~~~diDG~L 237 (267)
T 3ta6_A 161 AEQIGSVVIA---YEPVWAIGTGRVASAADAQEVCAAIRKELASLASPRIADTVRVLYGGSVNAKNVGDIVAQDDVDGGL 237 (267)
T ss_dssp HHHHTTCEEE---ECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHSCHHHHTTSCEEECSCCCTTTHHHHHTSTTCCEEE
T ss_pred HHHhCCEEEE---ECChhhhcCCcCCCHHHHHHHHHHHHHHHHHhhChhhhccceEEEcCCcCHhHHHHHhcCCCCCEEE
Confidence 343 35522 3554444443 3344455554321 124678889999999999875 57799999
Q ss_pred EcccccCCCCHHHHH
Q 023494 253 AGSAVFGAKDYAEAI 267 (281)
Q Consensus 253 vGSaIf~a~dp~~~~ 267 (281)
+|++-.+.++..+.+
T Consensus 238 VGgASL~~~~F~~Ii 252 (267)
T 3ta6_A 238 VGGASLDGEHFATLA 252 (267)
T ss_dssp ECGGGGSHHHHHHHH
T ss_pred echHhcCHHHHHHHH
Confidence 999988755554443
No 221
>3s6d_A Putative triosephosphate isomerase; seattle structural genomics center for infectious disease, S pathogenic fungus, eukaryote; 2.20A {Coccidioides immitis RS}
Probab=96.09 E-value=0.047 Score=50.06 Aligned_cols=140 Identities=16% Similarity=0.176 Sum_probs=88.4
Q ss_pred HHHHHHcCCCEEEEc--------ccccccccHHHHHHHHHHcCCcEEEEECCCCC-HH---------------HHHHhhc
Q 023494 131 VPDFIKAGADIVSVH--------CEQSSTIHLHRTLNQIKDLGAKAGVVLNPATS-LS---------------AIECVLD 186 (281)
Q Consensus 131 i~~~~~aGAd~Itvh--------~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~-ie---------------~~~~~l~ 186 (281)
.+++.++|+++|.+. .| +++.+.+-++.+.++|+.+.+-+.-... -+ .++..+.
T Consensus 133 a~mLkd~G~~~ViiGHSERR~~f~E--tde~V~~Kv~aAl~~GL~pIvCVGEtleere~~~~~~g~t~~vv~~Ql~~~l~ 210 (310)
T 3s6d_A 133 PVCLRDMNVSIVELGHAERRAIFGE--TDQQVARKAAAAADQGLIPLVCIGEVSTLGPIVSEAIGRAVGECEAQIRPVLE 210 (310)
T ss_dssp HHHHHHTTCCEEEESCHHHHHHHCC--CHHHHHHHHHHHHHTTCEEEEEECCCSCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEecccccccccCC--CHHHHHHHHHHHHHCCCEEEEEeCCcHHHhhhhccccccHHHHHHHHHHHHHh
Confidence 678899999999985 45 2455677788889999999887753321 11 1222232
Q ss_pred cC---CEEEEEeecCCC---CCCccchhHH-HHHHHHHHHhh----hcCCCCeEEEecCCChhcHHH--HHHcCCcEEEE
Q 023494 187 VV---DLVLIMSVNPGF---GGQSFIESQV-KKISDLRRMCL----EKGVNPWIEVDGGVGPKNAYK--VIEAGANALVA 253 (281)
Q Consensus 187 ~v---D~IlvmsV~pG~---~GQ~f~~~~l-~kI~~lr~l~~----~~~~~~~I~VDGGI~~e~i~~--~~~aGAD~~Vv 253 (281)
.+ .-+ +..-+|=+ +|+.-.|+.. +-.+.+|+.+. +...+++|.-.|+|+++++.+ + ..++|++-+
T Consensus 211 ~l~~~~~v-VIAYEPVWAIGTGk~Atpe~aqevh~~IR~~l~~~~~~~a~~vrILYGGSV~~~n~~~~~l-~~dVDG~LV 288 (310)
T 3s6d_A 211 ALPRDAPV-IFAYEPVWAIGKPQPARVDHVGAVVSGIRSVIERIDRHRKGEVRILYGGSAGPGLWGPGGL-GKEVDGMFL 288 (310)
T ss_dssp HSCTTSCE-EEEECCGGGC-----CCHHHHHHHHHHHHHHHHHHHTTCSSCEEEEEEEEECTTTTTTTSG-GGTCSEEEE
T ss_pred cCCcccce-EEEECChhhccCCCCCCHHHHHHHHHHHHHHHHHhhhcccCceeEEEcCccCHHHHhhhcc-cCCCCEEEe
Confidence 22 111 22446622 3544444433 22334444432 222356788899999999887 5 589999999
Q ss_pred cccccCCCCHHHHHHHHHHhc
Q 023494 254 GSAVFGAKDYAEAIKGIKTSK 274 (281)
Q Consensus 254 GSaIf~a~dp~~~~~~l~~~~ 274 (281)
|++-.+++++.+.++++.+.+
T Consensus 289 GgASL~a~~F~~Ii~e~~~~~ 309 (310)
T 3s6d_A 289 GRFAHDIEGVRKVVREVEESL 309 (310)
T ss_dssp CGGGGSHHHHHHHHHHHHHHC
T ss_pred eheeecHHHHHHHHHHHHHHh
Confidence 999999888888887776554
No 222
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=96.05 E-value=0.078 Score=47.36 Aligned_cols=130 Identities=18% Similarity=0.219 Sum_probs=83.2
Q ss_pred HHHHHHcCCCEEEEc--------ccccccccHHHHHHHHHHcCCcEEEEECCCCCHH-H------------HHHhhccC-
Q 023494 131 VPDFIKAGADIVSVH--------CEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLS-A------------IECVLDVV- 188 (281)
Q Consensus 131 i~~~~~aGAd~Itvh--------~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie-~------------~~~~l~~v- 188 (281)
.+++.++|+++|.+. .| +++.+.+-++.+.++|+++.+-+.- .++ + ++..++.+
T Consensus 82 ~~mL~d~G~~~ViiGHSERR~~f~E--td~~v~~Kv~~Al~~GL~pIlCvGE--tleere~g~t~~vv~~Ql~~~l~~~~ 157 (255)
T 3qst_A 82 VPMIKSFGIEWTILGHSERRDILKE--DDEFLAAKAKFALENGMKIIYCCGE--HLSEREAGKASEFVSAQIEKMIPAIP 157 (255)
T ss_dssp HHHHHTTTCCEEEESCHHHHHTSCC--CHHHHHHHHHHHHHTTCEEEEEECC--CHHHHHTTCHHHHHHHHHHHHGGGSC
T ss_pred HHHHHHcCCCEEEECchhhhhhcCC--CHHHHHHHHHHHHHCCCeEEEEcCC--cHHHHHcCCHHHHHHHHHHHHHccCC
Confidence 678899999999985 34 2455667788889999999887752 332 1 33444321
Q ss_pred --C--EEEEEeecCCC---CCCccchhHHHH-HHHHHHHhhhc-----CCCCeEEEecCCChhcHHHH-HHcCCcEEEEc
Q 023494 189 --D--LVLIMSVNPGF---GGQSFIESQVKK-ISDLRRMCLEK-----GVNPWIEVDGGVGPKNAYKV-IEAGANALVAG 254 (281)
Q Consensus 189 --D--~IlvmsV~pG~---~GQ~f~~~~l~k-I~~lr~l~~~~-----~~~~~I~VDGGI~~e~i~~~-~~aGAD~~VvG 254 (281)
+ -+ +..-+|=+ +|..-.|+..+. .+.+|+.+.+. ..+++|.-.|+|+++|+.++ .+.++|.+-+|
T Consensus 158 ~~~~~~~-vIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVG 236 (255)
T 3qst_A 158 AGKWDDV-VIAYEPIWAIGTGKVASTQDAQEMCKVIRDILAAKVGADIANKVRILYGGSVKPNNCNELAACPDVDGFLVG 236 (255)
T ss_dssp TTCGGGE-EEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCEEEECSCCCTTTHHHHHHSTTCCEEEEC
T ss_pred HHHhCCE-EEEECCHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCcCHhHHHHHhcCCCCCEEEee
Confidence 1 11 12346622 355544544433 34445544321 12368889999999999876 46899999999
Q ss_pred ccccCCCCHHHH
Q 023494 255 SAVFGAKDYAEA 266 (281)
Q Consensus 255 SaIf~a~dp~~~ 266 (281)
++-.+ ++..+.
T Consensus 237 gASL~-~~F~~I 247 (255)
T 3qst_A 237 GASLE-AGFINI 247 (255)
T ss_dssp GGGGS-TTHHHH
T ss_pred HHHhh-HHHHHH
Confidence 99887 455443
No 223
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Probab=96.01 E-value=0.023 Score=50.98 Aligned_cols=130 Identities=18% Similarity=0.314 Sum_probs=83.6
Q ss_pred HHHHHHcCCCEEEEc--------ccccccccHHHHHHHHHHcCCcEEEEECCCCCHHH-------------HHHhhccC-
Q 023494 131 VPDFIKAGADIVSVH--------CEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSA-------------IECVLDVV- 188 (281)
Q Consensus 131 i~~~~~aGAd~Itvh--------~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~-------------~~~~l~~v- 188 (281)
.+++.++|+++|.+. .| +++.+.+-++.+.++|+.+.+=+.- ..+. ++..+..+
T Consensus 87 ~~mL~d~G~~~ViiGHSERR~~f~E--td~~v~~Kv~~Al~~GL~pI~CvGE--tleere~g~t~~vv~~Ql~~~l~~~~ 162 (261)
T 1m6j_A 87 VGMLVDCQVPYVILGHSERRQIFHE--SNEQVAEKVKVAIDAGLKVIACIGE--TEAQRIANQTEEVVAAQLKAINNAIS 162 (261)
T ss_dssp HHHHHHTTCCEEEESCHHHHHHSCC--CHHHHHHHHHHHHHHTCEEEEEECC--CHHHHHTTCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHcCCCEEEECchhhhcccCC--CHHHHHHHHHHHHHCCCEEEEEcCC--cHHHHhCCCHHHHHHHHHHHHHhcCC
Confidence 678899999999985 44 3456777888889999999887752 3321 11112222
Q ss_pred -----CEEEEEeecC----CCCCCccchhHH-HHHHHHHHHhhhc-----CCCCeEEEecCCChhcHHHH-HHcCCcEEE
Q 023494 189 -----DLVLIMSVNP----GFGGQSFIESQV-KKISDLRRMCLEK-----GVNPWIEVDGGVGPKNAYKV-IEAGANALV 252 (281)
Q Consensus 189 -----D~IlvmsV~p----G~~GQ~f~~~~l-~kI~~lr~l~~~~-----~~~~~I~VDGGI~~e~i~~~-~~aGAD~~V 252 (281)
..| ..-+| | +|..-.|+.. +-.+.+|+.+.+. ..+++|.-.|+|+++|+.++ .+.++|.+-
T Consensus 163 ~~~~~~~v--IAYEPvWAIG-TG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~L 239 (261)
T 1m6j_A 163 KEAWKNII--LAYEPVWAIG-TGKTATPDQAQEVHQYIRKWMTENISKEVAEATRIQYGGSVNPANCNELAKKADIDGFL 239 (261)
T ss_dssp TGGGGGEE--EEECCGGGSS-SSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEECSCCCTTTHHHHHTSTTCCEEE
T ss_pred HHHcCCEE--EEECCHHHhC-CCCCCCHHHHHHHHHHHHHHHHHhhChhhcccccEEEcCCcCHhhHHHHhcCCCCCeeE
Confidence 222 23466 4 3444444443 2334444443321 11367888999999999876 467999999
Q ss_pred EcccccCCCCHHHHH
Q 023494 253 AGSAVFGAKDYAEAI 267 (281)
Q Consensus 253 vGSaIf~a~dp~~~~ 267 (281)
+|++..+++|+.+.+
T Consensus 240 VGgAsL~a~~F~~ii 254 (261)
T 1m6j_A 240 VGGASLDAAKFKTII 254 (261)
T ss_dssp ESGGGGSHHHHHHHH
T ss_pred ecHHHhChHHHHHHH
Confidence 999999877666544
No 224
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=96.01 E-value=0.046 Score=52.13 Aligned_cols=128 Identities=16% Similarity=0.211 Sum_probs=78.9
Q ss_pred HHHcCCCEEEEcccc---------c-----------cc-c----cHHHHHHHHHHc-------CCcEEEEECCC------
Q 023494 134 FIKAGADIVSVHCEQ---------S-----------ST-I----HLHRTLNQIKDL-------GAKAGVVLNPA------ 175 (281)
Q Consensus 134 ~~~aGAd~Itvh~Ea---------~-----------~~-~----~i~~~l~~ik~~-------G~k~Glai~p~------ 175 (281)
+.++|.|+|-+|+-. . +. + -+.++++++|+. +..+|+=++|.
T Consensus 179 A~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~~~~~~~ 258 (419)
T 3l5a_A 179 AIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEETRGSD 258 (419)
T ss_dssp HHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECSCEEETTE
T ss_pred HHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEecccccccCCC
Confidence 457899999999753 0 11 1 145677777763 45688888873
Q ss_pred --CCHHHH----HHhhc--cCCEEEEEeecCCC----CCCccchh--HHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcH
Q 023494 176 --TSLSAI----ECVLD--VVDLVLIMSVNPGF----GGQSFIES--QVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNA 240 (281)
Q Consensus 176 --t~ie~~----~~~l~--~vD~IlvmsV~pG~----~GQ~f~~~--~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i 240 (281)
...+.. +.+.+ .+|||-+..- +. ..+.+.+. ..+.++++++.+.. +++|.+-|||+ ++.+
T Consensus 259 ~G~~~ed~~~la~~L~~~~Gvd~I~vs~g--~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~---~iPVI~~GgI~t~e~A 333 (419)
T 3l5a_A 259 LGYTIDEFNQLIDWVMDVSNIQYLAIASW--GRHIYQNTSRTPGDHFGRPVNQIVYEHLAG---RIPLIASGGINSPESA 333 (419)
T ss_dssp EEECHHHHHHHHHHHHHHSCCCCEEECCT--TCCGGGCBCCCSSTTTTSBHHHHHHHHHTT---SSCEEECSSCCSHHHH
T ss_pred CCCCHHHHHHHHHHHHhhcCCcEEEEeeC--CccccccccCCCCccccHHHHHHHHHHcCC---CCeEEEECCCCCHHHH
Confidence 234333 33333 3899876432 11 01111111 12234555555431 36888999985 9999
Q ss_pred HHHHHcCCcEEEEcccccCCCCHHHHH
Q 023494 241 YKVIEAGANALVAGSAVFGAKDYAEAI 267 (281)
Q Consensus 241 ~~~~~aGAD~~VvGSaIf~a~dp~~~~ 267 (281)
.++++. +|.|.+|++++..+|....+
T Consensus 334 e~~L~~-aDlVaiGR~~IanPdlv~ki 359 (419)
T 3l5a_A 334 LDALQH-ADMVGMSSPFVTEPDFVHKL 359 (419)
T ss_dssp HHHGGG-CSEEEESTHHHHCTTHHHHH
T ss_pred HHHHHh-CCcHHHHHHHHHCcHHHHHH
Confidence 999999 99999999998777754433
No 225
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=95.96 E-value=0.13 Score=44.48 Aligned_cols=127 Identities=9% Similarity=0.059 Sum_probs=87.1
Q ss_pred CCceEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeee-------CcccccccCCHHHHHHcCcC---CCCCeeEEEEec
Q 023494 56 SDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMD-------GRFVPNITIGPLVVDALRPV---TDLPLDVHLMIV 125 (281)
Q Consensus 56 ~~~~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImD-------G~fvpn~~~G~~~I~~ir~~---t~~~idaHLmv~ 125 (281)
..++|+-+.++.--..+++.++.+.+.|.+.+++.... |++. ...+.+..++++|+. .++.+.++-...
T Consensus 8 ~~mklg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~ 86 (262)
T 3p6l_A 8 NGWRLGMQSYSFHLFPLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVF-DFNLDAQTQKEIKELAASKGIKIVGTGVYV 86 (262)
T ss_dssp TTEEEEEEGGGGTTSCHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEE-STTCCHHHHHHHHHHHHHTTCEEEEEEEEC
T ss_pred cCcEEEEEecccCCCCHHHHHHHHHHcCCCEEeecCCcccccccccccc-cccCCHHHHHHHHHHHHHcCCeEEEEeccC
Confidence 45789999999876799999999999999998885432 1110 123344455555442 566655543332
Q ss_pred Ch-----hhHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCC----CHHHHHHhhc
Q 023494 126 EP-----EQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT----SLSAIECVLD 186 (281)
Q Consensus 126 dp-----~~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t----~ie~~~~~l~ 186 (281)
+. .+.++.+.+.|++.|.+|.- .+.+.++.+.++++|+++++--.+.. ..+.+..+++
T Consensus 87 ~~~~~~~~~~i~~A~~lGa~~v~~~~~---~~~~~~l~~~a~~~gv~l~~En~~~~~~~~~~~~~~~ll~ 153 (262)
T 3p6l_A 87 AEKSSDWEKMFKFAKAMDLEFITCEPA---LSDWDLVEKLSKQYNIKISVHNHPQPSDYWKPENLLKAIS 153 (262)
T ss_dssp CSSTTHHHHHHHHHHHTTCSEEEECCC---GGGHHHHHHHHHHHTCEEEEECCSSSSSSSSHHHHHHHHT
T ss_pred CccHHHHHHHHHHHHHcCCCEEEecCC---HHHHHHHHHHHHHhCCEEEEEeCCCccccCCHHHHHHHHH
Confidence 21 23567778899999999964 35688899999999999999776653 3355666664
No 226
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=95.94 E-value=0.073 Score=47.40 Aligned_cols=123 Identities=10% Similarity=0.072 Sum_probs=83.2
Q ss_pred CCCCCceEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCC-CCCeeEEEEec------
Q 023494 53 FSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIV------ 125 (281)
Q Consensus 53 ~~~~~~~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t-~~~idaHLmv~------ 125 (281)
+.++..+|+.+|..-+...+.++++.+.+.|+|.+++.+=--.-.++...=.+.++.||+.+ ++|+.+++-..
T Consensus 15 ~g~~~p~Icv~l~~~~~~e~~~~~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~ 94 (257)
T 2yr1_A 15 IGGTEPCICAPVVGEDDRKVLREAEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGEIPILFTIRSEREGGQP 94 (257)
T ss_dssp ESSSSCEEEEEECCSSHHHHHHHHHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHSSSCCEEEECCCTTTTCCC
T ss_pred eCCCCcEEEEEecCCCHHHHHHHHHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhccCCCEEEEEeecccCCCC
Confidence 45667789999998888777777888777899999997321100111111123456777765 68999888653
Q ss_pred ---ChhhHH---HHHHHcC-CCEEEEcccccccccHHHHHHHHHHcCCcEEEEECC--CCC
Q 023494 126 ---EPEQRV---PDFIKAG-ADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNP--ATS 177 (281)
Q Consensus 126 ---dp~~~i---~~~~~aG-Ad~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p--~t~ 177 (281)
+...|+ +.+.+.| +|+|-+-.... . ...++++.+++.|.++.+..+. .||
T Consensus 95 ~~~~~~~~~~ll~~~~~~g~~d~iDvEl~~~-~-~~~~l~~~~~~~~~kvI~S~Hdf~~tP 153 (257)
T 2yr1_A 95 IPLNEAEVRRLIEAICRSGAIDLVDYELAYG-E-RIADVRRMTEECSVWLVVSRHYFDGTP 153 (257)
T ss_dssp CSSCHHHHHHHHHHHHHHTCCSEEEEEGGGT-T-HHHHHHHHHHHTTCEEEEEEEESSCCC
T ss_pred CCCCHHHHHHHHHHHHHcCCCCEEEEECCCC-h-hHHHHHHHHHhCCCEEEEEecCCCCCc
Confidence 223344 4456778 99999987642 3 5778888889999999998752 455
No 227
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=95.92 E-value=0.032 Score=47.10 Aligned_cols=113 Identities=14% Similarity=0.215 Sum_probs=71.1
Q ss_pred CeeEEEEecChh---hHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHc---CCcEEEEECCCCCHHHHHHhh-ccCC
Q 023494 117 PLDVHLMIVEPE---QRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL---GAKAGVVLNPATSLSAIECVL-DVVD 189 (281)
Q Consensus 117 ~idaHLmv~dp~---~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~---G~k~Glai~p~t~ie~~~~~l-~~vD 189 (281)
++.+=+...+++ ++++.+.+.|++.+.+|.+. .+..+.++.+|+. ++.+|+..- . ..+..+... ..+|
T Consensus 11 ~~i~~~~~~~~~~~~~~~~~~~~~G~~~iev~~~~---~~~~~~i~~ir~~~~~~~~ig~~~v-~-~~~~~~~a~~~Gad 85 (205)
T 1wa3_A 11 KIVAVLRANSVEEAKEKALAVFEGGVHLIEITFTV---PDADTVIKELSFLKEKGAIIGAGTV-T-SVEQCRKAVESGAE 85 (205)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHTTCCEEEEETTS---TTHHHHHHHTHHHHHTTCEEEEESC-C-SHHHHHHHHHHTCS
T ss_pred CEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCC---hhHHHHHHHHHHHCCCCcEEEeccc-C-CHHHHHHHHHcCCC
Confidence 455545556665 35667788999999999884 3455678888775 466676321 2 334444443 3599
Q ss_pred EEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEE
Q 023494 190 LVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVA 253 (281)
Q Consensus 190 ~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~Vv 253 (281)
+| + .|++. +..++.. ++ . +.++.+ |..+++.+....++|+|++-.
T Consensus 86 ~i-v---~~~~~-----~~~~~~~---~~----~--g~~vi~-g~~t~~e~~~a~~~Gad~vk~ 130 (205)
T 1wa3_A 86 FI-V---SPHLD-----EEISQFC---KE----K--GVFYMP-GVMTPTELVKAMKLGHTILKL 130 (205)
T ss_dssp EE-E---CSSCC-----HHHHHHH---HH----H--TCEEEC-EECSHHHHHHHHHTTCCEEEE
T ss_pred EE-E---cCCCC-----HHHHHHH---HH----c--CCcEEC-CcCCHHHHHHHHHcCCCEEEE
Confidence 99 3 46653 3333322 22 1 345543 556788899999999998864
No 228
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=95.89 E-value=0.043 Score=49.47 Aligned_cols=121 Identities=12% Similarity=0.087 Sum_probs=83.5
Q ss_pred cCCCCCceEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCC-CCCeeEEEEecC----
Q 023494 52 KFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIVE---- 126 (281)
Q Consensus 52 ~~~~~~~~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t-~~~idaHLmv~d---- 126 (281)
.+-++..+|+.+|..-+...+.++++.+.+.|+|.+++.+=--.-......=.+.++.||+.+ ++|+.+++-...
T Consensus 34 ~~g~g~p~i~v~l~~~~~~e~~~~~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~ 113 (276)
T 3o1n_A 34 VVGEGAPKIIVSLMGKTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGE 113 (276)
T ss_dssp EETSSSCEEEEEECCSSHHHHHHHHHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSSCEEEECCBGGGTCS
T ss_pred EeCCCCcEEEEEeCCCCHHHHHHHHHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCC
Confidence 355667899999999998888888888887899999996321110111112234566777764 789999887631
Q ss_pred ----hhhHHH---HHHHcC-CCEEEEcccccccccHHHHHHHHHHcCCcEEEEEC
Q 023494 127 ----PEQRVP---DFIKAG-ADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLN 173 (281)
Q Consensus 127 ----p~~~i~---~~~~aG-Ad~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~ 173 (281)
...|++ .+.+.| +|+|-+-... +.+.+.++++.+++.|.++.+.-+
T Consensus 114 ~~~~~~~~~~ll~~~l~~g~~dyIDvEl~~-~~~~~~~l~~~a~~~~~kvI~S~H 167 (276)
T 3o1n_A 114 QALTTGQYIDLNRAAVDSGLVDMIDLELFT-GDDEVKATVGYAHQHNVAVIMSNH 167 (276)
T ss_dssp BCCCHHHHHHHHHHHHHHTCCSEEEEEGGG-CHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHhcCCCCEEEEECcC-CHHHHHHHHHHHHhCCCEEEEEee
Confidence 233444 456778 9999998764 234566777888999999988754
No 229
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=95.87 E-value=0.054 Score=50.29 Aligned_cols=173 Identities=13% Similarity=0.094 Sum_probs=105.6
Q ss_pred HHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCC--CCCeeEEEEecChhhHHHHHHHcCCCEEEEcccccc
Q 023494 73 GEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT--DLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSS 150 (281)
Q Consensus 73 ~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t--~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~~ 150 (281)
.+.++.+...|+|++-+|.-|+.+ ...--...++.++... +.++.|-+--.||. .++.+.++|+++|.++.-. +
T Consensus 53 p~~~e~a~~~GaD~vilDlEha~~--~~e~~~~~l~a~~~~~~~~~~~~VRv~~~~~~-di~~~LdaGa~gImlP~V~-s 128 (339)
T 1izc_A 53 TFVTKVLAATKPDFVWIDVEHGMF--NRLELHDAIHAAQHHSEGRSLVIVRVPKHDEV-SLSTALDAGAAGIVIPHVE-T 128 (339)
T ss_dssp HHHHHHHHHTCCSEEEEETTTSCC--CHHHHHHHHHHHHHHTTTCSEEEEECCTTCHH-HHHHHHHHTCSEEEETTCC-C
T ss_pred HHHHHHHHhCCCCEEEEECCCCCC--cHHHHHHHHHHhhhcCCCCCeEEEEeCCCCHH-HHHHHHhCCCCEEEeCCCC-C
Confidence 355777778899999999988843 2111111222222111 14444432223443 5777889999999888654 3
Q ss_pred cccHHHHHHHHHHc--------------C--------------------CcEEEEECCCCCHHHHHHhhc--cCCEEEEE
Q 023494 151 TIHLHRTLNQIKDL--------------G--------------------AKAGVVLNPATSLSAIECVLD--VVDLVLIM 194 (281)
Q Consensus 151 ~~~i~~~l~~ik~~--------------G--------------------~k~Glai~p~t~ie~~~~~l~--~vD~Ilvm 194 (281)
.+++.++.+.++.. | +.+++.|....-++.+.+++. .+|.+.+.
T Consensus 129 aee~~~~~~~~~~~p~g~Rg~~~~a~~~G~~~~~~~~~~~~y~~~a~~~i~vi~mIEt~~av~nldeIaa~~~vD~l~iG 208 (339)
T 1izc_A 129 VEEVREFVKEMYYGPIGRRSFSPWTFSPGIADASLFPNDPYNVATSNNHVCIIPQIESVKGVENVDAIAAMPEIHGLMFG 208 (339)
T ss_dssp HHHHHHHHHHHSCTTTCCCCCCSTTCBTTTBCCCSSTTCTTCHHHHHHHCEEEEEECSHHHHHTHHHHHTCTTCCCEEEC
T ss_pred HHHHHHHHHHhccCccCcccccchhhcccccccccccchhhhhhhcCcCceEEEEEChHHHHHHHHHHhcCCCCCEEEEC
Confidence 56677777766531 1 346666744444567777764 58998875
Q ss_pred ee----c--------CCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecC--CChhcHHHHHHcCCcEEEEcccc
Q 023494 195 SV----N--------PGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGG--VGPKNAYKVIEAGANALVAGSAV 257 (281)
Q Consensus 195 sV----~--------pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGG--I~~e~i~~~~~aGAD~~VvGSaI 257 (281)
+. . -|..+ .|..+.-++++..-...+|. ++ |+ -+++.+..++..|.+.+++++.+
T Consensus 209 ~~DLs~~~~~~~~~~lG~~~---~p~v~~a~~~iv~aaraaGk--~~---g~~~~d~~~a~~~~~~Gf~~l~~~~di 277 (339)
T 1izc_A 209 PGDYMIDAGLDLNGALSGVP---HPTFVEAMTKFSTAAQRNGV--PI---FGGALSVDMVPSLIEQGYRAIAVQFDV 277 (339)
T ss_dssp HHHHHHHTTCCTTCCTTSCC---CHHHHHHHHHHHHHHHHTTC--CE---EEECSSGGGHHHHHHTTEEEEEEEEHH
T ss_pred HHHHHhhhhcccchhhCCCC---CHHHHHHHHHHHHHHHHhCC--ce---eEecCCHHHHHHHHHhCCCEEEecHHH
Confidence 32 3 23333 56666666666666655543 32 22 24678889999999999998754
No 230
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=95.86 E-value=0.029 Score=50.39 Aligned_cols=137 Identities=13% Similarity=0.100 Sum_probs=86.4
Q ss_pred CceEeEEEeccCccCHHHHHHHHHH-cCCCeEEEEeeeCc-------ccccccCCHHHHHHcCcCCCCCeeEEEEe--cC
Q 023494 57 DIIVSPSILSANFAKLGEQVKAVEL-AGCDWIHVDVMDGR-------FVPNITIGPLVVDALRPVTDLPLDVHLMI--VE 126 (281)
Q Consensus 57 ~~~i~pSila~D~~~l~~~l~~l~~-~G~d~iHiDImDG~-------fvpn~~~G~~~I~~ir~~t~~~idaHLmv--~d 126 (281)
...+.++|.+.+..++.+..+.+.+ .|+|.|++.+..-+ |..+..+-.++++++|+..+.|+.+.+.. .+
T Consensus 98 ~~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~~~~~~ 177 (311)
T 1ep3_A 98 ELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVKLSPNVTD 177 (311)
T ss_dssp TSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEEECSCSSC
T ss_pred CCcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEEECCChHH
Confidence 3458888988888888888888887 89999988754211 11111222677888887767888776542 35
Q ss_pred hhhHHHHHHHcCCCEEEE---------ccccc-----------cccc----HHHHHHHHHHcCCcEEEEECCC-CCHHHH
Q 023494 127 PEQRVPDFIKAGADIVSV---------HCEQS-----------STIH----LHRTLNQIKDLGAKAGVVLNPA-TSLSAI 181 (281)
Q Consensus 127 p~~~i~~~~~aGAd~Itv---------h~Ea~-----------~~~~----i~~~l~~ik~~G~k~Glai~p~-t~ie~~ 181 (281)
+.++.+.+.++|+|+|++ |.+.. +... ..+.++.+++.- ++=+..+-. ...+.+
T Consensus 178 ~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~-~ipvia~GGI~~~~d~ 256 (311)
T 1ep3_A 178 IVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDV-DIPIIGMGGVANAQDV 256 (311)
T ss_dssp SHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTC-SSCEEECSSCCSHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhc-CCCEEEECCcCCHHHH
Confidence 566788889999999999 54320 0000 135666776642 222333333 355666
Q ss_pred HHhhc-cCCEEEEE
Q 023494 182 ECVLD-VVDLVLIM 194 (281)
Q Consensus 182 ~~~l~-~vD~Ilvm 194 (281)
.+++. .+|.|.+.
T Consensus 257 ~~~l~~GAd~V~vg 270 (311)
T 1ep3_A 257 LEMYMAGASAVAVG 270 (311)
T ss_dssp HHHHHHTCSEEEEC
T ss_pred HHHHHcCCCEEEEC
Confidence 66654 59998763
No 231
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=95.84 E-value=0.32 Score=44.84 Aligned_cols=193 Identities=15% Similarity=0.210 Sum_probs=103.5
Q ss_pred cCHHHHHHHHHHcCCCeEEEEeeeCccccc---ccCCHHHHHHcCcCCCCCeeEEEEecCh--hhHHHHHHHcCCCEEEE
Q 023494 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPN---ITIGPLVVDALRPVTDLPLDVHLMIVEP--EQRVPDFIKAGADIVSV 144 (281)
Q Consensus 70 ~~l~~~l~~l~~~G~d~iHiDImDG~fvpn---~~~G~~~I~~ir~~t~~~idaHLmv~dp--~~~i~~~~~aGAd~Itv 144 (281)
..+.++++.+.+.|++.+.+ ..|..-|. ..+=.++++.+++. +. .+++ .... .+.++.+.++|.|.+.+
T Consensus 102 eei~~~~~~~~~~g~~~i~~--~gg~~~p~~~~~~~l~~ll~~ik~~-g~--~i~~-t~G~l~~e~l~~L~~aGvd~v~i 175 (369)
T 1r30_A 102 EQVLESARKAKAAGSTRFCM--GAAWKNPHERDMPYLEQMVQGVKAM-GL--EACM-TLGTLSESQAQRLANAGLDYYNH 175 (369)
T ss_dssp HHHHHHHHHHHHTTCSEEEE--EECCSSCCTTTHHHHHHHHHHHHHT-TS--EEEE-ECSSCCHHHHHHHHHHCCCEEEC
T ss_pred HHHHHHHHHHHHcCCcEEEE--EeCCCCCCcCCHHHHHHHHHHHHHc-CC--eEEE-ecCCCCHHHHHHHHHCCCCEEee
Confidence 34445555566778887764 33321122 12234555666653 33 3332 2221 24678899999999998
Q ss_pred ccccc-----------ccccHHHHHHHHHHcCCcEEE--EECCCCCHHHHHHhhc---c----CCEEEEEee--cCCCC-
Q 023494 145 HCEQS-----------STIHLHRTLNQIKDLGAKAGV--VLNPATSLSAIECVLD---V----VDLVLIMSV--NPGFG- 201 (281)
Q Consensus 145 h~Ea~-----------~~~~i~~~l~~ik~~G~k~Gl--ai~p~t~ie~~~~~l~---~----vD~IlvmsV--~pG~~- 201 (281)
..++. +.+...+.++.+++.|+++.+ .+..+...+.+.+.+. . ++.|-+... .||..
T Consensus 176 ~les~~e~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~I~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~l~p~~gT~l 255 (369)
T 1r30_A 176 NLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPL 255 (369)
T ss_dssp CCBSCHHHHHHHCCSSCHHHHHHHHHHHHHHHCEEECCEEECSSCCHHHHHHHHHHHHSSSSCCSEEEEEECCCCTTSTT
T ss_pred cCcCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeeeeeeEeeCCCCHHHHHHHHHHHHhhcCCCCEEEeeeeeecCCCcC
Confidence 87751 012355667778888887764 3333344444333322 1 556655443 45542
Q ss_pred -CCc-cc-hhHHHHHHHHHHHhhhcCCCCeEEEecC---CChhcHHHHHHcCCcEEEEcccccCC--CCHHHHHHHHHH
Q 023494 202 -GQS-FI-ESQVKKISDLRRMCLEKGVNPWIEVDGG---VGPKNAYKVIEAGANALVAGSAVFGA--KDYAEAIKGIKT 272 (281)
Q Consensus 202 -GQ~-f~-~~~l~kI~~lr~l~~~~~~~~~I~VDGG---I~~e~i~~~~~aGAD~~VvGSaIf~a--~dp~~~~~~l~~ 272 (281)
..+ .. .+.++.+..+|.+++.. .+-+-+| ++.+.-...+.+||+.++.|..+... .++++..+.+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~r~~l~~~----~i~i~~~~~~l~~~~~~~~l~~Gan~~~~g~~~~t~~~~~~~~~~~~i~~ 330 (369)
T 1r30_A 256 ADNDDVDAFDFIRTIAVARIMMPTS----YVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRK 330 (369)
T ss_dssp SSCCCCCHHHHHHHHHHHHHHCTTS----EEEEESSGGGSCHHHHHHHHHHTCCEEECSSBSSSSBCCCHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCC----ceEeecchhhcChHHHHHHhhCCCceEEeCCeeeCCCCCCHHHHHHHHHH
Confidence 111 11 22344455556665532 2334443 33444556689999999988765543 445656555555
No 232
>1ney_A TIM, triosephosphate isomerase; yeast, DHAP, dihydroxyacetone phosphate, michaelis complex; HET: FTR 13P; 1.20A {Saccharomyces cerevisiae} SCOP: c.1.1.1 PDB: 1nf0_A* 1i45_A* 1ypi_A 2ypi_A 7tim_A* 3ypi_A*
Probab=95.81 E-value=0.059 Score=47.92 Aligned_cols=130 Identities=18% Similarity=0.265 Sum_probs=82.5
Q ss_pred HHHHHHcCCCEEEEc--------ccccccccHHHHHHHHHHcCCcEEEEECCCCCHH-H------------HHHhhc---
Q 023494 131 VPDFIKAGADIVSVH--------CEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLS-A------------IECVLD--- 186 (281)
Q Consensus 131 i~~~~~aGAd~Itvh--------~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie-~------------~~~~l~--- 186 (281)
.+++.++|++++.+. .| +++.+.+-++.+.++|+++.+=+.- ..+ + ++..+.
T Consensus 79 ~~mL~d~G~~~ViiGHSERR~~f~E--td~~v~~Kv~~Al~~GL~pI~CvGE--tleere~g~t~~vv~~Ql~~~l~~~~ 154 (247)
T 1ney_A 79 VDQIKDVGAKYVILGHSERRSYFHE--DDKFIADKTKFALGQGVGVILCIGE--TLEEKKAGKTLDVVERQLNAVLEEVK 154 (247)
T ss_dssp HHHHHHTTCCEEEESCHHHHHTTCC--CHHHHHHHHHHHHHTTCEEEEEECC--CHHHHHTTCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHcCCCEEEECChhhccccCC--CHHHHHHHHHHHHHCCCEEEEEcCC--cHHHHHCCCHHHHHHHHHHHHHhchh
Confidence 678999999999985 34 3456777888889999999887752 322 1 111222
Q ss_pred cCCEEEEEeecC----CCCCCccchhHHH-HHHHHHHHhhhc-----CCCCeEEEecCCChhcHHHH-HHcCCcEEEEcc
Q 023494 187 VVDLVLIMSVNP----GFGGQSFIESQVK-KISDLRRMCLEK-----GVNPWIEVDGGVGPKNAYKV-IEAGANALVAGS 255 (281)
Q Consensus 187 ~vD~IlvmsV~p----G~~GQ~f~~~~l~-kI~~lr~l~~~~-----~~~~~I~VDGGI~~e~i~~~-~~aGAD~~VvGS 255 (281)
...-+ +..-+| | +|..-.|+..+ -.+.+|+.+.+. ..+++|.-.|+|+++|+.++ .+.++|.+-+|+
T Consensus 155 ~~~~~-vIAYEPvWAIG-TG~~Atpe~a~evh~~IR~~l~~~~~~~va~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGg 232 (247)
T 1ney_A 155 DFTNV-VVAYEPVXAIG-TGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNAVTFKDKADVDGFLVGG 232 (247)
T ss_dssp CCTTE-EEEECCGGGTT-TSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCEEEESSCCTTTGGGGTTCTTCCEEEESG
T ss_pred hhcCE-EEEECChhhcC-CCCCCCHHHHHHHHHHHHHHHHHhcChhhcccceEEEcCCcCHhHHHHHHcCCCCCeeEeeh
Confidence 11111 223466 4 35444444432 233444433221 11367888999999999865 578999999999
Q ss_pred cccCCCCHHHHH
Q 023494 256 AVFGAKDYAEAI 267 (281)
Q Consensus 256 aIf~a~dp~~~~ 267 (281)
+..+ +|+.+.+
T Consensus 233 AsL~-~~F~~Ii 243 (247)
T 1ney_A 233 ASLK-PEFVDII 243 (247)
T ss_dssp GGGS-THHHHHH
T ss_pred HHHH-HHHHHHH
Confidence 9998 8776543
No 233
>4g1k_A Triosephosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel, TPIA; 2.35A {Burkholderia thailandensis}
Probab=95.77 E-value=0.14 Score=46.11 Aligned_cols=128 Identities=20% Similarity=0.219 Sum_probs=81.9
Q ss_pred HHHHHHcCCCEEEEc--------ccccccccHHHHHHHHHHcCCcEEEEECCCCCHH-------------HHHHhhccC-
Q 023494 131 VPDFIKAGADIVSVH--------CEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLS-------------AIECVLDVV- 188 (281)
Q Consensus 131 i~~~~~aGAd~Itvh--------~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie-------------~~~~~l~~v- 188 (281)
.+++.++|+++|.+. .| +++.+.+-++.+.++|+.+.+-+.- .++ .++..++.+
T Consensus 105 a~MLkd~G~~~VIiGHSERR~~fgE--tde~V~~K~~~Al~~GL~pIlCVGE--tleeReag~t~~vv~~Ql~~~l~~~~ 180 (272)
T 4g1k_A 105 AGMVAEFGAAYAIVGHSERRAYHGE--SNETVAAKARRALAAGLTPIVCVGE--TLAEREAGTTEQVVGAQLDAVLAVLS 180 (272)
T ss_dssp HHHHHTTTCCEEEESCHHHHHHSCC--CHHHHHHHHHHHHHTTCEEEEEECC--CHHHHHTTCHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHcCCCEEEECchhcccccCC--CHHHHHHHHHHHHHCCCeEEEEeCC--CHHHHhCCCHHHHHHHHHHHHHhCCC
Confidence 678999999999986 44 2455667778889999999887742 222 122233323
Q ss_pred -----CEEEEEeecCCC---CCCccchhHH-HHHHHHHHHhhhc-CCCCeEEEecCCChhcHHHHHHc-CCcEEEEcccc
Q 023494 189 -----DLVLIMSVNPGF---GGQSFIESQV-KKISDLRRMCLEK-GVNPWIEVDGGVGPKNAYKVIEA-GANALVAGSAV 257 (281)
Q Consensus 189 -----D~IlvmsV~pG~---~GQ~f~~~~l-~kI~~lr~l~~~~-~~~~~I~VDGGI~~e~i~~~~~a-GAD~~VvGSaI 257 (281)
..|+ .=+|=+ +|+.-.|+-. +-...+|+.+.+. ..+++|.=.|+++++|+.++.+. .+|.+-+|++-
T Consensus 181 ~~~~~~vVI--AYEPVWAIGTG~tAt~e~aqevh~~IR~~l~~~~a~~~rIlYGGSV~~~N~~el~~~~dIDG~LVGgAS 258 (272)
T 4g1k_A 181 PDEAARIVV--AYEPVWAIGTGKSATAEQAQQVHAFLRGRLAAKGAGHVSLLYGGSVKADNAAELFGQPDIDGGLIGGAS 258 (272)
T ss_dssp HHHHTTCEE--EECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCTTSCEEECSCCCTTTHHHHHTSTTCCEEEECGGG
T ss_pred HHHcCCEEE--EECcHhhccCCCCCCHHHHHHHHHHHHHHHHHhhcCCceEEEcCCcCHhHHHHHhcCCCCCEEEechHh
Confidence 2222 335522 3544444433 3344555555421 22467888999999999998754 89999999987
Q ss_pred cCCCCHH
Q 023494 258 FGAKDYA 264 (281)
Q Consensus 258 f~a~dp~ 264 (281)
.++++..
T Consensus 259 L~~~~F~ 265 (272)
T 4g1k_A 259 LKSGDFL 265 (272)
T ss_dssp GSHHHHH
T ss_pred cCHHHHH
Confidence 7654443
No 234
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=95.72 E-value=0.013 Score=57.86 Aligned_cols=78 Identities=13% Similarity=0.094 Sum_probs=52.8
Q ss_pred CHHHHHHhhc-cCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCCh------------hcHHHH
Q 023494 177 SLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGP------------KNAYKV 243 (281)
Q Consensus 177 ~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~------------e~i~~~ 243 (281)
|++..+.|.+ .+|.+.+.-......+..-.+..++.|+++++. ..++|.|+|||+. +++..+
T Consensus 282 p~~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~-----~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~ 356 (555)
T 1jvn_A 282 PVQLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKT-----VFVPLTVGGGIKDIVDVDGTKIPALEVASLY 356 (555)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTT-----CCSCEEEESSCSCEECTTCCEECHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhh-----CCCcEEEeCccccchhcccccchHHHHHHHH
Confidence 5555555544 378887776664434433334456666655432 3578999999985 559999
Q ss_pred HHcCCcEEEEcccccC
Q 023494 244 IEAGANALVAGSAVFG 259 (281)
Q Consensus 244 ~~aGAD~~VvGSaIf~ 259 (281)
.++|||.+++||+.+.
T Consensus 357 l~aGad~V~igt~~~~ 372 (555)
T 1jvn_A 357 FRSGADKVSIGTDAVY 372 (555)
T ss_dssp HHHTCSEEEECHHHHH
T ss_pred HHcCCCEEEECCHHhh
Confidence 9999999999998874
No 235
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=95.70 E-value=0.33 Score=46.34 Aligned_cols=181 Identities=20% Similarity=0.216 Sum_probs=104.6
Q ss_pred CHHHHHHHHHHcCCCeEEEEeeeCcccccccCC-HHHHHHcCcC-CCCCeeEEEEecChhhHHHHHHHcCCCEEEEcccc
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIG-PLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQ 148 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G-~~~I~~ir~~-t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea 148 (281)
+-.+.++.|.+.|++.|++ | | |..+-+ .+.++.+.+. ....+.+++ ..+.. -++.+.++|++.|++-.-+
T Consensus 62 eKl~Ia~~L~~~Gv~~IEv----G-~-P~asp~d~~~~~~i~~~~~~~~v~~~~-r~~~~-di~~A~~aG~~~V~i~~s~ 133 (423)
T 3ivs_A 62 KKIQIAKALDNFGVDYIEL----T-S-PVASEQSRQDCEAICKLGLKCKILTHI-RCHMD-DARVAVETGVDGVDVVIGT 133 (423)
T ss_dssp HHHHHHHHHHHHTCSEEEE----C-C-TTSCHHHHHHHHHHHTSCCSSEEEEEE-ESCHH-HHHHHHHTTCSEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEE----e-e-cccCHHHHHHHHHHHhcCCCCEEEEee-ccChh-hHHHHHHcCCCEEEEEeec
Confidence 3335556778899999888 4 3 433222 2345555543 122232322 23433 3678899999998875321
Q ss_pred c----------c----cccHHHHHHHHHHcCCcEEEEECCC--CCHHHHHHhhc-----cCCEEEEEeecCCCCCCccch
Q 023494 149 S----------S----TIHLHRTLNQIKDLGAKAGVVLNPA--TSLSAIECVLD-----VVDLVLIMSVNPGFGGQSFIE 207 (281)
Q Consensus 149 ~----------~----~~~i~~~l~~ik~~G~k~Glai~p~--t~ie~~~~~l~-----~vD~IlvmsV~pG~~GQ~f~~ 207 (281)
+ + .+...+.++.+|+.|.++.+..... ++.+.+.++.+ .+|.|.+- -..|-....
T Consensus 134 Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~eda~r~d~~~~~~v~~~~~~~Ga~~i~l~----DTvG~~~P~ 209 (423)
T 3ivs_A 134 SQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSEDSFRSDLVDLLSLYKAVDKIGVNRVGIA----DTVGCATPR 209 (423)
T ss_dssp -------------CHHHHHHHHHHHHHHTTTCEEEEEEESGGGSCHHHHHHHHHHHHHHCCSEEEEE----ETTSCCCHH
T ss_pred cHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEccCcCCCHHHHHHHHHHHHHhCCCccccC----CccCcCCHH
Confidence 1 0 1234567888999999988765432 34554444433 26776552 222322223
Q ss_pred hHHHHHHHHHHHhhhcCCCCeEEE----ecCCChhcHHHHHHcCCcEEEEccccc------CCCCHHHHHHHH
Q 023494 208 SQVKKISDLRRMCLEKGVNPWIEV----DGGVGPKNAYKVIEAGANALVAGSAVF------GAKDYAEAIKGI 270 (281)
Q Consensus 208 ~~l~kI~~lr~l~~~~~~~~~I~V----DGGI~~e~i~~~~~aGAD~~VvGSaIf------~a~dp~~~~~~l 270 (281)
++.+.++.+++.. +.+|.+ |-|....|.-..+++||+.| -++|. ++.+.++.+..|
T Consensus 210 ~v~~lv~~l~~~~-----~~~i~~H~Hnd~GlAvAN~laAv~aGa~~v--d~ti~GlGERaGNa~Le~vv~~L 275 (423)
T 3ivs_A 210 QVYDLIRTLRGVV-----SCDIECHFHNDTGMAIANAYCALEAGATHI--DTSILGIGERNGITPLGALLARM 275 (423)
T ss_dssp HHHHHHHHHHHHC-----SSEEEEEEBCTTSCHHHHHHHHHHTTCCEE--EEBGGGCSSTTCBCBHHHHHHHH
T ss_pred HHHHHHHHHHhhc-----CCeEEEEECCCCchHHHHHHHHHHhCCCEE--EEecccccCcccchhHHHHHHHH
Confidence 4455566666543 356776 88998889999999999955 34444 234566555443
No 236
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=95.66 E-value=0.017 Score=50.31 Aligned_cols=48 Identities=23% Similarity=0.278 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCCC
Q 023494 209 QVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGAK 261 (281)
Q Consensus 209 ~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a~ 261 (281)
.++.++++++. .++++.+.|||+ .+.+.+++++|||.+++|++.+..+
T Consensus 63 ~~~~i~~i~~~-----~~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~~p 111 (252)
T 1ka9_F 63 LLDVVARVAER-----VFIPLTVGGGVRSLEDARKLLLSGADKVSVNSAAVRRP 111 (252)
T ss_dssp HHHHHHHHHTT-----CCSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHCT
T ss_pred cHHHHHHHHHh-----CCCCEEEECCcCCHHHHHHHHHcCCCEEEEChHHHhCc
Confidence 34455555432 357899999999 8899999999999999999988544
No 237
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=95.64 E-value=0.072 Score=48.76 Aligned_cols=180 Identities=19% Similarity=0.137 Sum_probs=101.9
Q ss_pred CccCHHHHHHHHHHcCCCeEEEEeeeCcccccc----cCCHHHHHHcCcCCCCCeeEEEEec-ChhhHHHHHHHcCCCEE
Q 023494 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNI----TIGPLVVDALRPVTDLPLDVHLMIV-EPEQRVPDFIKAGADIV 142 (281)
Q Consensus 68 D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~----~~G~~~I~~ir~~t~~~idaHLmv~-dp~~~i~~~~~aGAd~I 142 (281)
+...+.++++.+.+.|++.+.+ ..|. .|.. ..=.++++.+|+..++. +++-.. -..+.++.+.++|++.+
T Consensus 92 s~eei~~~~~~~~~~G~~~i~l--~gGe-~p~~~~~~~~~~~l~~~ik~~~~i~--i~~s~g~~~~e~l~~L~~aG~~~i 166 (350)
T 3t7v_A 92 TMEEIKETCKTLKGAGFHMVDL--TMGE-DPYYYEDPNRFVELVQIVKEELGLP--IMISPGLMDNATLLKAREKGANFL 166 (350)
T ss_dssp CHHHHHHHHHHHTTSCCSEEEE--EECC-CHHHHHSTHHHHHHHHHHHHHHCSC--EEEECSSCCHHHHHHHHHTTEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEE--eeCC-CCccccCHHHHHHHHHHHHhhcCce--EEEeCCCCCHHHHHHHHHcCCCEE
Confidence 4445556666666778887765 4553 1321 11256677776543433 333221 11346788999999999
Q ss_pred EEcccccc------------cccHHHHHHHHHHcCCcEEE--EECCCCCHHHHHHhhc-----cCCEEEEEeecC--CCC
Q 023494 143 SVHCEQSS------------TIHLHRTLNQIKDLGAKAGV--VLNPATSLSAIECVLD-----VVDLVLIMSVNP--GFG 201 (281)
Q Consensus 143 tvh~Ea~~------------~~~i~~~l~~ik~~G~k~Gl--ai~p~t~ie~~~~~l~-----~vD~IlvmsV~p--G~~ 201 (281)
.+..|+.+ .++..+.++.+++.|++++. .+......+.+.+.+. .++.|.+....| |..
T Consensus 167 ~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~e~~~~~l~~l~~l~~~~v~~~~f~p~~gT~ 246 (350)
T 3t7v_A 167 ALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQGYCVEDGILTGVGNDIESTILSLRGMSTNDPDMVRVMTFLPQEGTP 246 (350)
T ss_dssp ECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHHTCEEEEEEEESSSCCHHHHHHHHHHHHHTCCSEEEEEECCCCTTST
T ss_pred EEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeEccceEeecCCCHHHHHHHHHHHHhCCCCEEEecceeeCCCCc
Confidence 98877631 12355677888899988765 3444444444433332 267787776655 431
Q ss_pred --CC--ccchhHHHHHHHHHHHhhhcCCCCeEE-EecCCChhcHHHHHHcCCcEEEEccccc
Q 023494 202 --GQ--SFIESQVKKISDLRRMCLEKGVNPWIE-VDGGVGPKNAYKVIEAGANALVAGSAVF 258 (281)
Q Consensus 202 --GQ--~f~~~~l~kI~~lr~l~~~~~~~~~I~-VDGGI~~e~i~~~~~aGAD~~VvGSaIf 258 (281)
.. .-..+.++.+..+|-+++.. +++.. +-.|+ +.....+.+||| ++|+.+.
T Consensus 247 l~~~~~~~~~e~l~~ia~~Rl~lp~~--~I~a~~~~~g~--~~~~~~l~~Gan--~~~~~~~ 302 (350)
T 3t7v_A 247 LEGFRDKSNLSELKIISVLRLMFPKR--LIPASLDLEGI--DGMVLRLNAGAN--IVTSILP 302 (350)
T ss_dssp TTTCCCCCCCCHHHHHHHHHHHSTTS--BCEEEHHHHHH--HHHHHHHHTTCC--EEEEECC
T ss_pred CccCCCCChHHHHHHHHHHHHhCCCc--CccccccccCh--hHHHHHHhcCCc--eecCCCC
Confidence 11 11234566677777776542 33322 22333 456678999999 3455554
No 238
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=95.61 E-value=0.14 Score=47.07 Aligned_cols=187 Identities=15% Similarity=0.106 Sum_probs=109.5
Q ss_pred cCHHHHHHHHHHcCCCeEEEEeeeCcccccccC-CHHHHHHcCcC-CCCCeeEEEEecChhhHHHHHHHc----CCCEEE
Q 023494 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITI-GPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKA----GADIVS 143 (281)
Q Consensus 70 ~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~-G~~~I~~ir~~-t~~~idaHLmv~dp~~~i~~~~~a----GAd~It 143 (281)
.+-.+.++.|.+.|+++|++ | | |..+- ..+.++.+++. ++..+-+. .-.+. +.++.+.++ |++.|+
T Consensus 28 ~~Kl~ia~~L~~~Gv~~IE~----g-~-p~~~~~d~e~v~~i~~~~~~~~i~~l-~r~~~-~~i~~a~~al~~ag~~~v~ 99 (325)
T 3eeg_A 28 EEKIIVAKALDELGVDVIEA----G-F-PVSSPGDFNSVVEITKAVTRPTICAL-TRAKE-ADINIAGEALRFAKRSRIH 99 (325)
T ss_dssp THHHHHHHHHHHHTCSEEEE----E-C-TTSCHHHHHHHHHHHHHCCSSEEEEE-CCSCH-HHHHHHHHHHTTCSSEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEE----e-C-CCCCHhHHHHHHHHHHhCCCCEEEEe-ecCCH-HHHHHHHHhhcccCCCEEE
Confidence 34456677888899999888 3 3 32111 12345666553 44333331 11232 345666666 999988
Q ss_pred Eccccc--------------ccccHHHHHHHHHHcCCcEEEEEC--CCCCHHHHHHhhc-----cCCEEEEEeecCCCCC
Q 023494 144 VHCEQS--------------STIHLHRTLNQIKDLGAKAGVVLN--PATSLSAIECVLD-----VVDLVLIMSVNPGFGG 202 (281)
Q Consensus 144 vh~Ea~--------------~~~~i~~~l~~ik~~G~k~Glai~--p~t~ie~~~~~l~-----~vD~IlvmsV~pG~~G 202 (281)
+..-.. ..+.+.+.++.+|+.|..+.+... ..++.+.+.++++ .+|.|.+ +...|
T Consensus 100 i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l----~DT~G 175 (325)
T 3eeg_A 100 TGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCEDAGRADQAFLARMVEAVIEAGADVVNI----PDTTG 175 (325)
T ss_dssp EEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEETGGGSCHHHHHHHHHHHHHHTCSEEEC----CBSSS
T ss_pred EEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEccccccchHHHHHHHHHHHHhcCCCEEEe----cCccC
Confidence 764321 122356788999999998766432 2356666555544 2676654 33334
Q ss_pred CccchhHHHHHHHHHHHhhhcCCCCeEEE----ecCCChhcHHHHHHcCCcEEEEccccc------CCCCHHHHHHHHH
Q 023494 203 QSFIESQVKKISDLRRMCLEKGVNPWIEV----DGGVGPKNAYKVIEAGANALVAGSAVF------GAKDYAEAIKGIK 271 (281)
Q Consensus 203 Q~f~~~~l~kI~~lr~l~~~~~~~~~I~V----DGGI~~e~i~~~~~aGAD~~VvGSaIf------~a~dp~~~~~~l~ 271 (281)
-....++.+.++.+++.++.. .+.+|.+ |-|....|.-..+++||+.|= +++. ++.+.++.+..|+
T Consensus 176 ~~~P~~v~~lv~~l~~~~~~~-~~~~i~~H~Hnd~GlA~AN~laA~~aGa~~vd--~tv~GlGer~GN~~lE~vv~~L~ 251 (325)
T 3eeg_A 176 YMLPWQYGERIKYLMDNVSNI-DKAILSAHCHNDLGLATANSLAALQNGARQVE--CTINGIGERAGNTALEEVVMAME 251 (325)
T ss_dssp CCCHHHHHHHHHHHHHHCSCG-GGSEEEECBCCTTSCHHHHHHHHHHHTCCEEE--EBGGGCCSTTCCCBHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHhCCCC-CceEEEEEeCCCCCHHHHHHHHHHHhCCCEEE--EecccccccccchhHHHHHHHHH
Confidence 333344556677777665410 0156776 889998899999999999763 2232 2345565555554
No 239
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=95.60 E-value=0.022 Score=49.64 Aligned_cols=48 Identities=17% Similarity=0.258 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCCC
Q 023494 209 QVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGAK 261 (281)
Q Consensus 209 ~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a~ 261 (281)
.++.++++++. .++++.+.|||+ ++.+.++.++|||.+++|++.+..+
T Consensus 62 ~~~~i~~i~~~-----~~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~~l~~p 110 (253)
T 1thf_D 62 MLELVEKVAEQ-----IDIPFTVGGGIHDFETASELILRGADKVSINTAAVENP 110 (253)
T ss_dssp HHHHHHHHHTT-----CCSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHHCT
T ss_pred cHHHHHHHHHh-----CCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHHhCh
Confidence 34455555432 357899999999 7889999999999999999988543
No 240
>3kxq_A Triosephosphate isomerase; ssgcid, NIH, niaid, SBRI, UW, gluconeogenesis, glycolysis, pentose shunt; 1.60A {Bartonella henselae}
Probab=95.60 E-value=0.12 Score=46.59 Aligned_cols=128 Identities=20% Similarity=0.274 Sum_probs=79.3
Q ss_pred HHHHHHcCCCEEEEc--------ccccccccHHHHHHHHHHcCCcEEEEECCCCCHH-------------HHHHhhcc-C
Q 023494 131 VPDFIKAGADIVSVH--------CEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLS-------------AIECVLDV-V 188 (281)
Q Consensus 131 i~~~~~aGAd~Itvh--------~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie-------------~~~~~l~~-v 188 (281)
.+++.++|+++|.+. .| +++.+.+-++.+.++|+++.+-+.- .++ .++..++. .
T Consensus 105 ~~mLkd~G~~~VIiGHSERR~~f~E--tde~V~~Kv~~Al~~GL~pIlCVGE--tleeRe~g~t~~vv~~Ql~~~l~~~~ 180 (275)
T 3kxq_A 105 AFMLKEAGASHVIIGHSERRTVYQE--SDAIVRAKVQAAWRAGLVALICVGE--TLEERKSNKVLDVLTRQLEGSLPDGA 180 (275)
T ss_dssp HHHHHHHTCSEEEESCHHHHHHTCC--CHHHHHHHHHHHHHTTCEEEEEECC--CHHHHHTTCHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHcCCCEEEECchhhccccCC--CHHHHHHHHHHHHHCCCEEEEEeCC--CHHHHHCCCHHHHHHHHHHHHHcCCc
Confidence 678999999999985 45 2455667778889999999887752 221 13333332 1
Q ss_pred C---EEEEEeecCCC---CCCccchhHH-HHHHHHHHHhhhc----CCCCeEEEecCCChhcHHHHHHc-CCcEEEEccc
Q 023494 189 D---LVLIMSVNPGF---GGQSFIESQV-KKISDLRRMCLEK----GVNPWIEVDGGVGPKNAYKVIEA-GANALVAGSA 256 (281)
Q Consensus 189 D---~IlvmsV~pG~---~GQ~f~~~~l-~kI~~lr~l~~~~----~~~~~I~VDGGI~~e~i~~~~~a-GAD~~VvGSa 256 (281)
+ .| ..-+|=+ +|..-.|+.. +-.+.+|+.+.+. ..+++|.=.|+++++|+.++.+. .+|.+-+|++
T Consensus 181 ~~~~vV--IAYEPVWAIGTGktAt~e~aqevh~~IR~~l~~~~~~~a~~~rIlYGGSV~~~Na~el~~~~dIDG~LVGgA 258 (275)
T 3kxq_A 181 TAENII--IAYEPVWAVGTGNTATSADVAEVHAFIHHKMHSRFGDEGAKIRLLYGGSVKPSNAFELLSTAHVNGALIGGA 258 (275)
T ss_dssp CTTTEE--EEECCCC--------CHHHHHHHHHHHHHHHHHHHHHHHTTSCEEECSCCCTTTHHHHHTSTTCCEEEESGG
T ss_pred ccCCEE--EEECChhhhcCCCCCCHHHHHHHHHHHHHHHHHhhhhhcccceEEEcCCcCHhHHHHHHcCCccceEEeehh
Confidence 1 22 2336633 2544333333 2233444444321 22578888999999999998754 8999999998
Q ss_pred ccCCCCHH
Q 023494 257 VFGAKDYA 264 (281)
Q Consensus 257 If~a~dp~ 264 (281)
-.+.++..
T Consensus 259 SL~~~~F~ 266 (275)
T 3kxq_A 259 SLKAIDFL 266 (275)
T ss_dssp GSSHHHHH
T ss_pred hcCHHHHH
Confidence 77654443
No 241
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=95.45 E-value=0.057 Score=60.66 Aligned_cols=146 Identities=18% Similarity=0.266 Sum_probs=94.5
Q ss_pred HHHHHcCcCC--CCCeeEEEEecChh------hHHHHHHHcCCCE--EEEcccccccccHHHHHHHHHHcCCcEEEEECC
Q 023494 105 LVVDALRPVT--DLPLDVHLMIVEPE------QRVPDFIKAGADI--VSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNP 174 (281)
Q Consensus 105 ~~I~~ir~~t--~~~idaHLmv~dp~------~~i~~~~~aGAd~--Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p 174 (281)
+.|+.+|+.+ +.++-+.+|..+|. .+++.+.+.|+.. |++..- .+.+....+.+++.|+++. .+.|
T Consensus 632 ~~I~~~~~~t~~~~~~gvN~~~~~~~~~~~~~~~~~~~~~~gv~i~~v~~~ag---~p~~~~~~~~i~~lG~~vi-~~~~ 707 (2051)
T 2uv8_G 632 AAIDSVVSQIEKGSTFGINLIYVNPFMLQWGIPLIKELRSKGYPIQFLTIGAG---VPSLEVASEYIETLGLKYL-GLKP 707 (2051)
T ss_dssp HHHHHHHHHSCTTCCEEEEEETTCTTHHHHHHHHHHHHHHTTCSEEEEEEESS---CCCHHHHHHHHHHSCCSCE-EECC
T ss_pred HHHHHHHHhcCCCCceEEEEeecChhhhhhhHHHHHHHHHcCCCcceEEecCC---CCchhhHHHHHHHcCCEEE-EecC
Confidence 3455566654 47999999999885 5678888999888 887654 2345566777788888875 4444
Q ss_pred CCCH--HHHHHhhc-cCCEEEEEeecCCCC-CC----ccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHH-
Q 023494 175 ATSL--SAIECVLD-VVDLVLIMSVNPGFG-GQ----SFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVI- 244 (281)
Q Consensus 175 ~t~i--e~~~~~l~-~vD~IlvmsV~pG~~-GQ----~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~- 244 (281)
++.. .......+ .+|.++++.++=|-+ |. .+..-++.-+.++++. .++++.+.|||. .+.+..++
T Consensus 708 ~~~~a~~~~~~~~~~g~d~~ii~~~~G~eaGGH~g~~d~~~~~l~l~~~v~~~-----~~ipviaaGGi~dg~~~~aaL~ 782 (2051)
T 2uv8_G 708 GSIDAISQVINIAKAHPNFPIALQWTGGRGGGHHSFEDAHTPMLQMYSKIRRH-----PNIMLIFGSGFGSADDTYPYLT 782 (2051)
T ss_dssp CSHHHHHHHHHHHHHSTTSCEEEEECCSSCSEECCSCCSSHHHHHHHHHHTTC-----TTBCCEEESSCCSHHHHTHHHH
T ss_pred chHHHHHHHHHHHHhCCCceeEEEEEccCcCCCCCcccccccHHHHHHHHHhc-----CCceEEEeCCCCCHHHHHHHHc
Confidence 4332 22233333 488865555542222 21 2223344445555543 358899999999 55666667
Q ss_pred ----------HcCCcEEEEcccccC
Q 023494 245 ----------EAGANALVAGSAVFG 259 (281)
Q Consensus 245 ----------~aGAD~~VvGSaIf~ 259 (281)
..|||.+-+||.+.-
T Consensus 783 g~w~~~~g~~~lgadGv~~GTrf~~ 807 (2051)
T 2uv8_G 783 GEWSTKFDYPPMPFDGFLFGSRVMI 807 (2051)
T ss_dssp TCGGGTTTCCCCCCSCEECSGGGTT
T ss_pred cccccccCccCCCCceeeechHHHh
Confidence 799999999988653
No 242
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=95.43 E-value=0.19 Score=46.58 Aligned_cols=139 Identities=19% Similarity=0.225 Sum_probs=88.6
Q ss_pred CCceEeEEEeccCccCHHHHHHHHHHcCCCeEEEEee--------e--C-cccccccCCHHHHHHcCcCCCCCeeEEEEe
Q 023494 56 SDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVM--------D--G-RFVPNITIGPLVVDALRPVTDLPLDVHLMI 124 (281)
Q Consensus 56 ~~~~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDIm--------D--G-~fvpn~~~G~~~I~~ir~~t~~~idaHLmv 124 (281)
....+...|...|+..+.++.+.+.+.|+|.|.+-.- | | .+..+..+-.++++++++..+.|+.+-+-+
T Consensus 56 ~~~p~~vQL~g~~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~ 135 (350)
T 3b0p_A 56 EEHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRL 135 (350)
T ss_dssp GGCSEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEES
T ss_pred CCCeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEec
Confidence 3456888999888888999999999999998766431 1 1 111112334456777777667888874432
Q ss_pred --cC------hhhHHHHHHHcCCCEEEEccccc----c-c------ccHHHHHHHHHHcCCcEEEEECCC-CCHHHHHHh
Q 023494 125 --VE------PEQRVPDFIKAGADIVSVHCEQS----S-T------IHLHRTLNQIKDLGAKAGVVLNPA-TSLSAIECV 184 (281)
Q Consensus 125 --~d------p~~~i~~~~~aGAd~Itvh~Ea~----~-~------~~i~~~l~~ik~~G~k~Glai~p~-t~ie~~~~~ 184 (281)
.+ ..++++.+.++|+|+|++|.-.. + . .--.+.++.+++.--++=|..|-+ +..+.++++
T Consensus 136 g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~ 215 (350)
T 3b0p_A 136 GLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFH 215 (350)
T ss_dssp CBTTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHH
T ss_pred CcCccccHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHH
Confidence 22 23456788899999999997420 0 0 001356677776521233344444 466777777
Q ss_pred hccCCEEEEE
Q 023494 185 LDVVDLVLIM 194 (281)
Q Consensus 185 l~~vD~Ilvm 194 (281)
+..+|.|.+.
T Consensus 216 l~GaD~V~iG 225 (350)
T 3b0p_A 216 LKRVDGVMLG 225 (350)
T ss_dssp HTTSSEEEEC
T ss_pred HhCCCEEEEC
Confidence 7789999874
No 243
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=95.42 E-value=0.03 Score=48.47 Aligned_cols=74 Identities=14% Similarity=0.289 Sum_probs=49.2
Q ss_pred CHHHHHHhhc-cCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEc
Q 023494 177 SLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAG 254 (281)
Q Consensus 177 ~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvG 254 (281)
+.+..+.+.+ .+|+|.+...+..+.+.. .. +.|+++++.. ++++.+.|||+ ++.+..++++|||.+++|
T Consensus 33 ~~~~a~~~~~~Gad~i~v~~~d~~~~~~~---~~-~~i~~i~~~~-----~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg 103 (244)
T 2y88_A 33 AVDAALGWQRDGAEWIHLVDLDAAFGRGS---NH-ELLAEVVGKL-----DVQVELSGGIRDDESLAAALATGCARVNVG 103 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHHTTSCC---CH-HHHHHHHHHC-----SSEEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEEcCcccccCCC---hH-HHHHHHHHhc-----CCcEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 4444444433 367776654333333322 11 4556665543 47899999999 789999999999999999
Q ss_pred ccccC
Q 023494 255 SAVFG 259 (281)
Q Consensus 255 SaIf~ 259 (281)
++.+.
T Consensus 104 ~~~l~ 108 (244)
T 2y88_A 104 TAALE 108 (244)
T ss_dssp HHHHH
T ss_pred chHhh
Confidence 98774
No 244
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=95.35 E-value=0.027 Score=48.94 Aligned_cols=74 Identities=15% Similarity=0.282 Sum_probs=47.7
Q ss_pred CHHHHHHhhc-cCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEc
Q 023494 177 SLSAIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAG 254 (281)
Q Consensus 177 ~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvG 254 (281)
+.+..+.+.+ .+|+|.+...+..+.+... . +.|+++++.. +.++.+.|||+ ++.+..++++|||.+++|
T Consensus 34 ~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~---~-~~i~~i~~~~-----~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg 104 (244)
T 1vzw_A 34 PLEAALAWQRSGAEWLHLVDLDAAFGTGDN---R-ALIAEVAQAM-----DIKVELSGGIRDDDTLAAALATGCTRVNLG 104 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHHHTSCCC---H-HHHHHHHHHC-----SSEEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEecCchhhcCCCh---H-HHHHHHHHhc-----CCcEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 3444444433 3676665433322223211 1 4455555542 47899999999 788999999999999999
Q ss_pred ccccC
Q 023494 255 SAVFG 259 (281)
Q Consensus 255 SaIf~ 259 (281)
+..+.
T Consensus 105 ~~~l~ 109 (244)
T 1vzw_A 105 TAALE 109 (244)
T ss_dssp HHHHH
T ss_pred chHhh
Confidence 98774
No 245
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=95.35 E-value=0.065 Score=46.76 Aligned_cols=166 Identities=16% Similarity=0.208 Sum_probs=91.4
Q ss_pred CHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcC-CCCCeeEEEEecChh---------hHHHHHHHcCCC
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPE---------QRVPDFIKAGAD 140 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~-t~~~idaHLmv~dp~---------~~i~~~~~aGAd 140 (281)
++++.++.+.+.|.+.+-+ .|.+++..++. .+..+.++.-+.=|. .-++.+.+.|||
T Consensus 20 ~i~~l~~~a~~~~~~aVcv-------------~p~~v~~~~~~l~~~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~~GAd 86 (220)
T 1ub3_A 20 EVAKAAEEALEYGFYGLCI-------------PPSYVAWVRARYPHAPFRLVTVVGFPLGYQEKEVKALEAALACARGAD 86 (220)
T ss_dssp HHHHHHHHHHHHTCSEEEC-------------CGGGHHHHHHHCTTCSSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHhCCCEEEE-------------CHHHHHHHHHHhCCCCceEEEEecCCCCCCchHHHHHHHHHHHHcCCC
Confidence 4555566666777776532 22233332221 122345555665543 235678899999
Q ss_pred EEEEccccc-----ccccHHHHHHHHHHc----CCcEEEEECCCCCHHHHHHhhc-----cCCEEEEEeecCCCCCCccc
Q 023494 141 IVSVHCEQS-----STIHLHRTLNQIKDL----GAKAGVVLNPATSLSAIECVLD-----VVDLVLIMSVNPGFGGQSFI 206 (281)
Q Consensus 141 ~Itvh~Ea~-----~~~~i~~~l~~ik~~----G~k~Glai~p~t~ie~~~~~l~-----~vD~IlvmsV~pG~~GQ~f~ 206 (281)
-|-+|..-. ..+...+.+..+++. ++|+-+....-| .+.+..... .+|+|=. .-||...
T Consensus 87 evd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~-~e~i~~a~~ia~eaGADfVKT---sTGf~~~--- 159 (220)
T 1ub3_A 87 EVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGYFS-PEEIARLAEAAIRGGADFLKT---STGFGPR--- 159 (220)
T ss_dssp EEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSC-HHHHHHHHHHHHHHTCSEEEC---CCSSSSC---
T ss_pred EEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCC-HHHHHHHHHHHHHhCCCEEEe---CCCCCCC---
Confidence 999986421 112233444444443 333333332223 233333222 3798842 3355311
Q ss_pred hhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCc--EEEEcccccC
Q 023494 207 ESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGAN--ALVAGSAVFG 259 (281)
Q Consensus 207 ~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD--~~VvGSaIf~ 259 (281)
..+++.++.+++.. +..++|-+.|||+ .+++..++++||+ ..-.|..|++
T Consensus 160 gat~~dv~~m~~~v---g~~v~VkaaGGirt~~~al~~i~aGa~RiG~S~g~~I~~ 212 (220)
T 1ub3_A 160 GASLEDVALLVRVA---QGRAQVKAAGGIRDRETALRMLKAGASRLGTSSGVALVA 212 (220)
T ss_dssp CCCHHHHHHHHHHH---TTSSEEEEESSCCSHHHHHHHHHTTCSEEEETTHHHHHC
T ss_pred CCCHHHHHHHHHhh---CCCCeEEEECCCCCHHHHHHHHHCCCcccchhHHHHHHH
Confidence 23455666666655 2357899999999 6788889999999 5555555664
No 246
>3th6_A Triosephosphate isomerase; alpha/beta barrel, embryogenesis, glycolysis; 2.40A {Rhipicephalus microplus}
Probab=95.33 E-value=0.19 Score=44.65 Aligned_cols=125 Identities=16% Similarity=0.226 Sum_probs=77.8
Q ss_pred HHHHHHcCCCEEEEc--------ccccccccHHHHHHHHHHcCCcEEEEECCCCCHH-------------HHHHhhccC-
Q 023494 131 VPDFIKAGADIVSVH--------CEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLS-------------AIECVLDVV- 188 (281)
Q Consensus 131 i~~~~~aGAd~Itvh--------~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie-------------~~~~~l~~v- 188 (281)
.+++.++|++++.+. .| +++.+.+-++.+.++|+.+.+-+.- .++ .++..+..+
T Consensus 80 ~~mL~d~G~~~ViiGHSERR~~f~E--td~~v~~Kv~~Al~~GL~pI~CvGE--tleere~g~t~~vv~~Ql~~~l~~~~ 155 (249)
T 3th6_A 80 PGMIKDCGGQWVILGHSERRHVFKE--DDVLIGEKIKHALESGLNVIACIGE--LLEDREAGRTEEVCFRQIKHIASNVK 155 (249)
T ss_dssp HHHHHHTTCCEEEESCHHHHHTSCC--CHHHHHHHHHHHHHTTCEEEEEECC--CHHHHTTTCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHcCCCEEEECchhhccccCC--CHHHHHHHHHHHHHCCCEEEEEcCC--cHHHHhcCCHHHHHHHHHHHHHhchh
Confidence 678899999999985 34 2455666678889999999887752 221 123333322
Q ss_pred C--EEEEEeecCCC---CCCccchhHHH-HHHHHHHHhhhc-----CCCCeEEEecCCChhcHHHHH-HcCCcEEEEccc
Q 023494 189 D--LVLIMSVNPGF---GGQSFIESQVK-KISDLRRMCLEK-----GVNPWIEVDGGVGPKNAYKVI-EAGANALVAGSA 256 (281)
Q Consensus 189 D--~IlvmsV~pG~---~GQ~f~~~~l~-kI~~lr~l~~~~-----~~~~~I~VDGGI~~e~i~~~~-~aGAD~~VvGSa 256 (281)
+ -+ +..-+|=+ +|..-.|+..+ -.+.+|+.+.+. ..+++|.-.|+|+++|+.++. +.++|.+-+|++
T Consensus 156 ~~~~~-vIAYEPvWAIGTG~~At~e~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgA 234 (249)
T 3th6_A 156 DWSKV-VIAYEPVWAIGTGKTATPDQAQEVHSKVRNWLSTNVSADVASKVRIQYGGSVNAGNCKELGRKPDIDGFLVGGA 234 (249)
T ss_dssp CGGGE-EEEECCTTTCCC---CCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEECSCCCTTTHHHHHTSTTCCEEEECGG
T ss_pred hhcCE-EEEECCcchhcCCCCCCHHHHHHHHHHHHHHHHHhhChhhcccccEEEcCccCHhHHHHHhcCCCCCEEEeehH
Confidence 1 11 22446633 35544444432 234445443221 113678899999999998764 688999999999
Q ss_pred ccCC
Q 023494 257 VFGA 260 (281)
Q Consensus 257 If~a 260 (281)
-.++
T Consensus 235 SL~~ 238 (249)
T 3th6_A 235 SLKP 238 (249)
T ss_dssp GGST
T ss_pred hhhH
Confidence 8765
No 247
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=95.32 E-value=0.47 Score=41.97 Aligned_cols=130 Identities=21% Similarity=0.249 Sum_probs=82.5
Q ss_pred HHHHHHcCCCEEEEc--------ccccccccHHHHHHHHHHcCCcEEEEECCCCCHHH-------------HHHhhccCC
Q 023494 131 VPDFIKAGADIVSVH--------CEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSA-------------IECVLDVVD 189 (281)
Q Consensus 131 i~~~~~aGAd~Itvh--------~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~-------------~~~~l~~vD 189 (281)
.+++.++|+++|.+. .| +++.+.+=++.+.++|+++.+=+.- .++. ++..+..++
T Consensus 74 ~~mL~d~G~~~ViiGHSERR~~f~E--td~~v~~Kv~~Al~~GL~pI~CvGE--tleereag~t~~vv~~Ql~~~l~~~~ 149 (244)
T 2v5b_A 74 LASLKDYGISWVVLGHSERRLYYGE--TNEIVAEKVAQACAAGFHVIVCVGE--TNEEREAGRTAAVVLTQLAAVAQKLS 149 (244)
T ss_dssp HHHHHHTTCCEEEECCHHHHHHSCC--CHHHHHHHHHHHHHTTCEEEEEECC--CHHHHHTTCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHcCCCEEEeCchhhhhccCC--CHHHHHHHHHHHHHCCCeEEEEcCC--cHHHHhcCCHHHHHHHHHHHHHhcCC
Confidence 778999999999986 44 2455666688889999999887752 3221 223333321
Q ss_pred -----EEEEEeecC----CCCCCccchhHH-HHHHHHHHHhhhc-----CCCCeEEEecCCChhcHHHHH-HcCCcEEEE
Q 023494 190 -----LVLIMSVNP----GFGGQSFIESQV-KKISDLRRMCLEK-----GVNPWIEVDGGVGPKNAYKVI-EAGANALVA 253 (281)
Q Consensus 190 -----~IlvmsV~p----G~~GQ~f~~~~l-~kI~~lr~l~~~~-----~~~~~I~VDGGI~~e~i~~~~-~aGAD~~Vv 253 (281)
-+ +..-+| |. |..-.|+.. +-.+.+|+.+.+. ..+++|.-.|+|+++|+.++. ...+|++-+
T Consensus 150 ~~~~~~~-vIAYEPvWAIGT-G~~Atpe~aqevh~~IR~~l~~~~~~~va~~vrIlYGGSV~~~N~~~l~~~~diDG~LV 227 (244)
T 2v5b_A 150 KEAWSRV-VIAYEPVWAIGT-GKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKNARTLYQMRDINGFLV 227 (244)
T ss_dssp TGGGGGE-EEEECCHHHHSS-SCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCEEEECSCCCHHHHHHHHTSTTCCEEEE
T ss_pred HHHcCCE-EEEECCHHHhCC-CCCCCHHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCCCHhHHHHHhcCCCCCeeee
Confidence 12 224466 53 444444433 2233444433221 013678889999999999876 456999999
Q ss_pred cccccCCCCHHHHH
Q 023494 254 GSAVFGAKDYAEAI 267 (281)
Q Consensus 254 GSaIf~a~dp~~~~ 267 (281)
|++=.+ ++..+.+
T Consensus 228 GgASL~-~~F~~Ii 240 (244)
T 2v5b_A 228 GGASLK-PEFVEII 240 (244)
T ss_dssp SGGGSS-TTHHHHH
T ss_pred chHHHH-HHHHHHH
Confidence 999887 7766544
No 248
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=95.27 E-value=0.093 Score=53.09 Aligned_cols=128 Identities=16% Similarity=0.143 Sum_probs=79.0
Q ss_pred HHHcCCCEEEEccccc--------c-----cc-----------cHHHHHHHHHHc---CCcEEEEECCC-------CC-H
Q 023494 134 FIKAGADIVSVHCEQS--------S-----TI-----------HLHRTLNQIKDL---GAKAGVVLNPA-------TS-L 178 (281)
Q Consensus 134 ~~~aGAd~Itvh~Ea~--------~-----~~-----------~i~~~l~~ik~~---G~k~Glai~p~-------t~-i 178 (281)
+.++|.|.|-+|.-.. + ++ -+.++++++|+. +..+++=++|. .. .
T Consensus 158 a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~~~~G~~~~ 237 (729)
T 1o94_A 158 SRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEAE 237 (729)
T ss_dssp HHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSSCTTSCCTT
T ss_pred HHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccCcCCCCCCch
Confidence 4578999999997540 0 00 166788888875 45578777652 11 2
Q ss_pred HH---HHHhhc-cCCEEEEEeec----CCC-CCCccchh--HHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHc
Q 023494 179 SA---IECVLD-VVDLVLIMSVN----PGF-GGQSFIES--QVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEA 246 (281)
Q Consensus 179 e~---~~~~l~-~vD~IlvmsV~----pG~-~GQ~f~~~--~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~a 246 (281)
+. +.+.++ .+|++-+.... .+. ..+.+.+. .++.++++|+. .++++.+-|||+ ++.+.++++.
T Consensus 238 ~~~~~~~~~l~~~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-----~~~pvi~~G~i~~~~~a~~~l~~ 312 (729)
T 1o94_A 238 VDGQKFVEMADSLVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQV-----SKKPVLGVGRYTDPEKMIEIVTK 312 (729)
T ss_dssp THHHHHHHHHGGGCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTT-----CSSCEECCSCCCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhcCEEEEeeecccccccccCCccccCccccHHHHHHHHHH-----CCCEEEEeCCCCCHHHHHHHHHC
Confidence 12 333333 47887664321 000 11112221 13444555543 357898999995 9999999999
Q ss_pred C-CcEEEEcccccCCCCHHHH
Q 023494 247 G-ANALVAGSAVFGAKDYAEA 266 (281)
Q Consensus 247 G-AD~~VvGSaIf~a~dp~~~ 266 (281)
| ||.+.+|++++..+|.-..
T Consensus 313 g~aD~V~~gR~~l~~P~~~~~ 333 (729)
T 1o94_A 313 GYADIIGCARPSIADPFLPQK 333 (729)
T ss_dssp TSCSBEEESHHHHHCTTHHHH
T ss_pred CCCCEEEeCchhhcCchHHHH
Confidence 8 9999999999877765433
No 249
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=95.25 E-value=0.28 Score=47.24 Aligned_cols=126 Identities=22% Similarity=0.350 Sum_probs=73.3
Q ss_pred hhHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHc-CCcEEEEECCCCCHHHHHHhhccCCEEEEEeecCCCCC----
Q 023494 128 EQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL-GAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGG---- 202 (281)
Q Consensus 128 ~~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~-G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG~~G---- 202 (281)
.+....+.++|+|.+.+..........-..++.+++. ++.+ ++=+.. ..+....+. .+|.|.+ ++-+|.-.
T Consensus 230 ~~~a~~l~~~gvd~lvvdta~G~~~~~L~~I~~l~~~~~vpv-i~k~v~-~~~~a~~l~-G~d~v~v-g~g~g~~~~~r~ 305 (486)
T 2cu0_A 230 IKRAIELDKAGVDVIVVDTAHAHNLKAIKSMKEMRQKVDADF-IVGNIA-NPKAVDDLT-FADAVKV-GIGPGSICTTRI 305 (486)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCCCHHHHHHHHHHHHTCCSEE-EEEEEC-CHHHHTTCT-TSSEEEE-CSSCSTTBCHHH
T ss_pred HHHHHHHHHhcCCceEEEecCCcEeehhhHHHHHHHHhCCcc-ccCCcC-CHHHHHHhh-CCCeEEE-eeeeccceeeeE
Confidence 4456778899999887754221112233455666654 4444 221222 334455555 8899877 33222200
Q ss_pred -CccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccC
Q 023494 203 -QSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFG 259 (281)
Q Consensus 203 -Q~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~ 259 (281)
..+-...+.-|..+++...+. +++|..||||. ...+.+.+.+|||.+-+|+.+..
T Consensus 306 ~~~~g~~~~~~l~~~~~~~~~~--~vpVia~GGi~~~~di~kalalGA~~v~~g~~~~~ 362 (486)
T 2cu0_A 306 VAGVGVPQITAVAMVADRAQEY--GLYVIADGGIRYSGDIVKAIAAGADAVMLGNLLAG 362 (486)
T ss_dssp HTCCCCCHHHHHHHHHHHHHHH--TCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTT
T ss_pred EeecCcchHHHHHHHHHHHHHc--CCcEEecCCCCCHHHHHHHHHcCCCceeeChhhhc
Confidence 000001223344445444432 47898999999 66888888999999999999874
No 250
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=95.23 E-value=0.079 Score=47.33 Aligned_cols=98 Identities=14% Similarity=0.166 Sum_probs=55.6
Q ss_pred CccCHHHHHHHHHHcCCCeEEEEeeeC-cccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHc--CCCEEE-
Q 023494 68 NFAKLGEQVKAVELAGCDWIHVDVMDG-RFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA--GADIVS- 143 (281)
Q Consensus 68 D~~~l~~~l~~l~~~G~d~iHiDImDG-~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~a--GAd~It- 143 (281)
|+....+..+.+.+.|+|+|.|.. | ..++.-..=.+++..++..++.|+-+ =+.+|. .++.+.++ |+++|-
T Consensus 23 ~~~~a~~~a~~~v~~GAdiIDIg~--g~~~v~~~ee~~rvv~~i~~~~~~pisI--DT~~~~-v~~aAl~a~~Ga~iINd 97 (262)
T 1f6y_A 23 DPAPVQEWARRQEEGGARALDLNV--GPAVQDKVSAMEWLVEVTQEVSNLTLCL--DSTNIK-AIEAGLKKCKNRAMINS 97 (262)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEBC--C----CHHHHHHHHHHHHHTTCCSEEEE--ECSCHH-HHHHHHHHCSSCEEEEE
T ss_pred CHHHHHHHHHHHHHCCCcEEEECC--CCCCCChHHHHHHHHHHHHHhCCCeEEE--eCCCHH-HHHHHHhhCCCCCEEEE
Confidence 444445555667788999875432 2 11111111223344445444555544 334554 56677777 999885
Q ss_pred EcccccccccHHHHHHHHHHcCCcEEEEEC
Q 023494 144 VHCEQSSTIHLHRTLNQIKDLGAKAGVVLN 173 (281)
Q Consensus 144 vh~Ea~~~~~i~~~l~~ik~~G~k~Glai~ 173 (281)
+-.+ .+...+.+..++++|..+.+.-.
T Consensus 98 vs~~---~d~~~~~~~~~a~~~~~vvlmh~ 124 (262)
T 1f6y_A 98 TNAE---REKVEKLFPLAVEHGAALIGLTM 124 (262)
T ss_dssp ECSC---HHHHHHHHHHHHHTTCEEEEESC
T ss_pred CCCC---cccHHHHHHHHHHhCCcEEEEcC
Confidence 6554 23355788889999986655443
No 251
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=95.23 E-value=0.045 Score=48.05 Aligned_cols=33 Identities=27% Similarity=0.317 Sum_probs=29.6
Q ss_pred CCeEEEecCCC-hhcHHHHHHcCCcEEEEccccc
Q 023494 226 NPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVF 258 (281)
Q Consensus 226 ~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf 258 (281)
++++.+.|||+ .+.+..+.++|||.+++|++++
T Consensus 74 ~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~~~~ 107 (266)
T 2w6r_A 74 TLPIIASGGAGKMEHFLEAFLAGADKALAASVFH 107 (266)
T ss_dssp CSCEEEESCCCSTHHHHHHHHHTCSEEECCCCC-
T ss_pred CCCEEEECCCCCHHHHHHHHHcCCcHhhhhHHHH
Confidence 57899999999 6889999999999999999988
No 252
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=95.21 E-value=0.043 Score=50.26 Aligned_cols=126 Identities=14% Similarity=0.129 Sum_probs=81.0
Q ss_pred HHHHHHHcCCCEEE--Eccccc------ccccHHHHHHHHHHcCCcEEEE--ECC--------CCCHHHHHHhhc-----
Q 023494 130 RVPDFIKAGADIVS--VHCEQS------STIHLHRTLNQIKDLGAKAGVV--LNP--------ATSLSAIECVLD----- 186 (281)
Q Consensus 130 ~i~~~~~aGAd~It--vh~Ea~------~~~~i~~~l~~ik~~G~k~Gla--i~p--------~t~ie~~~~~l~----- 186 (281)
-++.+.+.|||.+. +|..-. ..+++.++.++++++|+-+-+. +.| .+..+.+.....
T Consensus 133 sVe~AvrlGADaV~~l~~i~~Gs~~e~~~l~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaRiAaEL 212 (307)
T 3fok_A 133 NVSSMVDRGVDFAKTLVRINLSDAGTAPTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAIAAGL 212 (307)
T ss_dssp CHHHHHHHTCCEEEEEEEECTTCTTHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHHHHHHHHHTC
T ss_pred CHHHHHHCCCCEEEEEEEECCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHHHHHHHHHHHHh
Confidence 37788899999977 664321 1235678888899999988775 322 134444444322
Q ss_pred cCC----EEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCCh----h---cHHHHHH-cCCcEEEEc
Q 023494 187 VVD----LVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGP----K---NAYKVIE-AGANALVAG 254 (281)
Q Consensus 187 ~vD----~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~----e---~i~~~~~-aGAD~~VvG 254 (281)
.+| +|=+ -.| +.+++ ..... ..++.+.||=.. + .+...++ +|+..+++|
T Consensus 213 GADs~~tivK~--~y~---------e~f~~------Vv~a~--~vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vG 273 (307)
T 3fok_A 213 GNDSSYTWMKL--PVV---------EEMER------VMEST--TMPTLLLGGEGGNDPDATFASWEHALTLPGVRGLTVG 273 (307)
T ss_dssp SSCCSSEEEEE--ECC---------TTHHH------HGGGC--SSCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEEC
T ss_pred CCCcCCCEEEe--CCc---------HHHHH------HHHhC--CCCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEeec
Confidence 156 5422 112 12222 22221 367778887663 2 4556677 799999999
Q ss_pred ccccC--CCCHHHHHHHHHHhc
Q 023494 255 SAVFG--AKDYAEAIKGIKTSK 274 (281)
Q Consensus 255 SaIf~--a~dp~~~~~~l~~~~ 274 (281)
+.||+ .+||.+.++.+...+
T Consensus 274 RNIfQ~~~~dp~~~v~al~~iV 295 (307)
T 3fok_A 274 RTLLYPQDGDVAAAVDTAARLV 295 (307)
T ss_dssp TTTSSCSSSCHHHHHHHHHHHH
T ss_pred hhhccCCCCCHHHHHHHHHHHH
Confidence 99999 899999999988754
No 253
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=95.19 E-value=0.074 Score=49.85 Aligned_cols=97 Identities=15% Similarity=0.190 Sum_probs=62.7
Q ss_pred ccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCCCCccchh-HHHHHHHHHHHhhhcCCCCeE
Q 023494 152 IHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIES-QVKKISDLRRMCLEKGVNPWI 229 (281)
Q Consensus 152 ~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f~~~-~l~kI~~lr~l~~~~~~~~~I 229 (281)
+...+.++.+++.|..+.+.+.+....+..+.+.+ .+|.+.+- ..+... ..+.+. ..+.|+++++.. +.++
T Consensus 142 ~~~~~~i~~~~~~g~~v~~~v~~~~~~e~a~~~~~agad~i~i~-~~~~~~-~~~~~~~~~~~i~~l~~~~-----~~pv 214 (393)
T 2qr6_A 142 ELLSERIAQVRDSGEIVAVRVSPQNVREIAPIVIKAGADLLVIQ-GTLISA-EHVNTGGEALNLKEFIGSL-----DVPV 214 (393)
T ss_dssp HHHHHHHHHHHHTTSCCEEEECTTTHHHHHHHHHHTTCSEEEEE-CSSCCS-SCCCC-----CHHHHHHHC-----SSCE
T ss_pred HHHHHHHHHHhhcCCeEEEEeCCccHHHHHHHHHHCCCCEEEEe-CCcccc-ccCCCcccHHHHHHHHHhc-----CCCE
Confidence 34567888999999999988887655554554433 57887543 222100 011121 344566666653 4678
Q ss_pred EEecCCChhcHHHHHHcCCcEEEEcc
Q 023494 230 EVDGGVGPKNAYKVIEAGANALVAGS 255 (281)
Q Consensus 230 ~VDGGI~~e~i~~~~~aGAD~~VvGS 255 (281)
.+-|..+++.+..+.++|||.+++|+
T Consensus 215 i~ggi~t~e~a~~~~~~Gad~i~vg~ 240 (393)
T 2qr6_A 215 IAGGVNDYTTALHMMRTGAVGIIVGG 240 (393)
T ss_dssp EEECCCSHHHHHHHHTTTCSEEEESC
T ss_pred EECCcCCHHHHHHHHHcCCCEEEECC
Confidence 77666779999999999999999986
No 254
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=95.17 E-value=0.23 Score=53.07 Aligned_cols=192 Identities=15% Similarity=0.137 Sum_probs=112.5
Q ss_pred CHHHHHHHHHHcCCCeEEEEeeeC-ccccc---ccCCH-HHHHHcCcC-CCCCeeEEEEe-------cCh----hhHHHH
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMDG-RFVPN---ITIGP-LVVDALRPV-TDLPLDVHLMI-------VEP----EQRVPD 133 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImDG-~fvpn---~~~G~-~~I~~ir~~-t~~~idaHLmv-------~dp----~~~i~~ 133 (281)
+..+..+.|.+.|+++.++.+.-| +|--. .+..+ +.++.+++. ++..+.+.+-- .-| ..+++.
T Consensus 574 dkl~ia~~L~~~gv~~~~iE~~gga~f~~~~~f~~~~p~e~l~~~~~~~~~~~~~~l~R~~n~vg~~~~~~~~~~~~i~~ 653 (1165)
T 2qf7_A 574 DIARIAGTYSHALPNLLSLECWGGATFDVSMRFLTEDPWERLALIREGAPNLLLQMLLRGANGVGYTNYPDNVVKYFVRQ 653 (1165)
T ss_dssp HHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHHHCCCHHHHHHHHHHHCTTSEEEEEEETTTBTCSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCceEEEeCCCCccHHHHhhcCCCHHHHHHHHHHHchhhHHHHHhccccccccccCCchhHHHHHHH
Confidence 444555677788888755554433 33211 13334 456666654 44444332211 112 246888
Q ss_pred HHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCC----------CCHHHHHHhhc-----cCCEEEEEeecC
Q 023494 134 FIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPA----------TSLSAIECVLD-----VVDLVLIMSVNP 198 (281)
Q Consensus 134 ~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~----------t~ie~~~~~l~-----~vD~IlvmsV~p 198 (281)
+.++|+|.+.+-.-....+.+...++.+++.|..+-.+++.. ++.+.+.++++ .+|.|.+-
T Consensus 654 a~~~g~d~irif~sl~~~~~~~~~i~~~~~~g~~v~~~i~~~~~~~d~~r~~~~~~~~~~~~~~~~~~Ga~~i~l~---- 729 (1165)
T 2qf7_A 654 AAKGGIDLFRVFDCLNWVENMRVSMDAIAEENKLCEAAICYTGDILNSARPKYDLKYYTNLAVELEKAGAHIIAVK---- 729 (1165)
T ss_dssp HHHHTCCEEEEECTTCCGGGGHHHHHHHHHTTCEEEEEEECCSCTTCTTSGGGCHHHHHHHHHHHHHTTCSEEEEE----
T ss_pred HHhcCcCEEEEEeeHHHHHHHHHHHHHHHhccceEEEEEEEeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEe----
Confidence 999999997775432234678899999999998887765322 34444444433 27877653
Q ss_pred CCCCCccchhHHHHHHHHHHHhhhcCCCCeEEE----ecCCChhcHHHHHHcCCcEEEEc----ccccCCCCHHHHHHHH
Q 023494 199 GFGGQSFIESQVKKISDLRRMCLEKGVNPWIEV----DGGVGPKNAYKVIEAGANALVAG----SAVFGAKDYAEAIKGI 270 (281)
Q Consensus 199 G~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~V----DGGI~~e~i~~~~~aGAD~~VvG----SaIf~a~dp~~~~~~l 270 (281)
-..|-....++.+.++.+++.+ +.+|.+ |-|....|.-..+++|||.+=.- +.-.++.+.++.+..|
T Consensus 730 DT~G~~~P~~~~~lv~~l~~~~-----~~~i~~H~Hnd~GlAvAn~laAv~aGa~~vd~ti~GlGe~~Gn~~le~vv~~L 804 (1165)
T 2qf7_A 730 DMAGLLKPAAAKVLFKALREAT-----GLPIHFHTHDTSGIAAATVLAAVEAGVDAVDAAMDALSGNTSQPCLGSIVEAL 804 (1165)
T ss_dssp ETTCCCCHHHHHHHHHHHHHHC-----SSCEEEEECBTTSCHHHHHHHHHHTTCSEEEEBCGGGCSBTSCCBHHHHHHHH
T ss_pred CccCCcCHHHHHHHHHHHHHhc-----CCeEEEEECCCCCHHHHHHHHHHHhCCCEEEecccccCCCccchhHHHHHHHH
Confidence 2233323334456677777654 356776 88999999999999999976322 1123344555544444
Q ss_pred H
Q 023494 271 K 271 (281)
Q Consensus 271 ~ 271 (281)
+
T Consensus 805 ~ 805 (1165)
T 2qf7_A 805 S 805 (1165)
T ss_dssp T
T ss_pred H
Confidence 3
No 255
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=95.16 E-value=0.061 Score=53.95 Aligned_cols=126 Identities=21% Similarity=0.195 Sum_probs=78.7
Q ss_pred HHHcCCCEEEEccccc---------------------ccc----cHHHHHHHHHHc-C--CcEEEEECCCCC------HH
Q 023494 134 FIKAGADIVSVHCEQS---------------------STI----HLHRTLNQIKDL-G--AKAGVVLNPATS------LS 179 (281)
Q Consensus 134 ~~~aGAd~Itvh~Ea~---------------------~~~----~i~~~l~~ik~~-G--~k~Glai~p~t~------ie 179 (281)
+.++|.|.|-+|.-.. +.+ -+.++++++|+. | ..+++=++|... .+
T Consensus 165 a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~~~~~g~~~~ 244 (690)
T 3k30_A 165 SIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEEEIDGGITRE 244 (690)
T ss_dssp HHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCCCSTTSCCHH
T ss_pred HHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECccccCCCCCCHH
Confidence 4578999999986421 001 255788888875 4 468887876532 33
Q ss_pred HHHHh---h-ccCCEEEEEeec-------CCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC
Q 023494 180 AIECV---L-DVVDLVLIMSVN-------PGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG 247 (281)
Q Consensus 180 ~~~~~---l-~~vD~IlvmsV~-------pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG 247 (281)
+..++ + +.+|++.+.... +.+.++.+. ++-++++|+. .++++..-|||+ ++.+.++++.|
T Consensus 245 ~~~~~~~~l~~~~d~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~-----~~~pvi~~G~i~~~~~a~~~l~~g 316 (690)
T 3k30_A 245 DIEGVLRELGELPDLWDFAMGSWEGDSVTSRFAPEGRQ---EEFVAGLKKL-----TTKPVVGVGRFTSPDAMVRQIKAG 316 (690)
T ss_dssp HHHHHHHHHTTSSSEEEEECSCHHHHTCCTTTCCTTTT---HHHHTTSGGG-----CSSCEEECSCCCCHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhcCEEEEecccccccCCCCccCCcccc---HHHHHHHHHH-----cCCeEEEeCCCCCHHHHHHHHHCC
Confidence 33222 2 247888664321 111121121 2333444433 357888899997 89999999998
Q ss_pred -CcEEEEcccccCCCCHHHHH
Q 023494 248 -ANALVAGSAVFGAKDYAEAI 267 (281)
Q Consensus 248 -AD~~VvGSaIf~a~dp~~~~ 267 (281)
+|.+.+|++++..+|.-..+
T Consensus 317 ~~d~v~~gR~~~~~P~~~~~~ 337 (690)
T 3k30_A 317 ILDLIGAARPSIADPFLPNKI 337 (690)
T ss_dssp SCSEEEESHHHHHCTTHHHHH
T ss_pred CcceEEEcHHhHhCccHHHHH
Confidence 99999999999777755433
No 256
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=95.12 E-value=0.096 Score=48.70 Aligned_cols=126 Identities=18% Similarity=0.238 Sum_probs=76.7
Q ss_pred HHHcCCCEEEEccccc--------c------------cc----cHHHHHHHHHHc-CC-cEEEEECCCCC---------H
Q 023494 134 FIKAGADIVSVHCEQS--------S------------TI----HLHRTLNQIKDL-GA-KAGVVLNPATS---------L 178 (281)
Q Consensus 134 ~~~aGAd~Itvh~Ea~--------~------------~~----~i~~~l~~ik~~-G~-k~Glai~p~t~---------i 178 (281)
+.++|.|+|-+|+-.. + .+ -+.++++++|+. |- .+|+=+++... .
T Consensus 161 A~~AGFDgVEIH~ahGYLl~QFLSp~tN~RtDeYGGS~eNR~Rf~~Eii~avr~~vg~~~v~vRls~~~~~~g~~~~~~~ 240 (358)
T 4a3u_A 161 ALKAGFDGVQIHAANGYLIDEFIRDSTNHRHDEYGGAVENRIRLLKDVTERVIATIGKERTAVRLSPNGEIQGTVDSHPE 240 (358)
T ss_dssp HHHTTCSEEEEEECTTSHHHHHHSTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECCSSCBTTBCCSSTH
T ss_pred HHHcCCCeEeecccCCCcHHhceecccCCeeCCCCCCHHHHHHHHHHHHHHHHHHcCccceEEEeccCcccCCCcccchH
Confidence 4679999999996421 0 00 155778888764 32 47777776422 2
Q ss_pred HHHHHh---hc--cCCEEEEEee-cCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcC-CcEE
Q 023494 179 SAIECV---LD--VVDLVLIMSV-NPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAG-ANAL 251 (281)
Q Consensus 179 e~~~~~---l~--~vD~IlvmsV-~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aG-AD~~ 251 (281)
+.+.++ +. .+|++-+..- .++..+..+.+...++|+ +.. ..++.+.|+.+++.+.++++.| +|.+
T Consensus 241 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~ik---~~~-----~~~v~~~g~~~~~~ae~~l~~G~aD~V 312 (358)
T 4a3u_A 241 QVFIPAAKMLSDLDIAFLGMREGAVDGTFGKTDQPKLSPEIR---KVF-----KPPLVLNQDYTFETAQAALDSGVADAI 312 (358)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCBTTCSSSBCSSCCCHHHHH---HHC-----CSCEEEESSCCHHHHHHHHHHTSCSEE
T ss_pred HHHHHHHHhhhccCccccccccccccCcccccccHHHHHHHH---Hhc-----CCcEEEeCCCCHHHHHHHHHcCCceEe
Confidence 222222 22 2566655322 122223333344444443 332 3567788888899999999999 8999
Q ss_pred EEcccccCCCCHHHHH
Q 023494 252 VAGSAVFGAKDYAEAI 267 (281)
Q Consensus 252 VvGSaIf~a~dp~~~~ 267 (281)
.+|+.+...+|.-..+
T Consensus 313 ~~gR~~ladPdlp~k~ 328 (358)
T 4a3u_A 313 SFGRPFIGNPDLPRRF 328 (358)
T ss_dssp EESHHHHHCTTHHHHH
T ss_pred HhhHHHHhChhHHHHH
Confidence 9999999877765443
No 257
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_A*
Probab=95.12 E-value=0.15 Score=48.96 Aligned_cols=129 Identities=18% Similarity=0.183 Sum_probs=83.5
Q ss_pred HHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCC---EE-EEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHH
Q 023494 104 PLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGAD---IV-SVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLS 179 (281)
Q Consensus 104 ~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd---~I-tvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie 179 (281)
..+++.+++.++.|+.++ .||. -++...++|+| .| .+.. ++.+++...++++|..+.+. .+ .++
T Consensus 144 ~~~Vk~V~e~~dvPlsID---~dp~-vleaale~~~d~~pLIns~t~-----en~~~~~~la~~y~~~vV~~-~~--~l~ 211 (445)
T 2h9a_A 144 AKAVATAREVTDLPFILI---GTPE-QLAAALETEGANNPLLYAATA-----DNYEQMVELAKKYNVPLTVS-AK--GLD 211 (445)
T ss_dssp HHHHHHHHHHCCSCEEEE---SCHH-HHHHHHHHHGGGCCEEEEECT-----TTHHHHHHHHHHHTCCEEEE-CS--SHH
T ss_pred HHHHHHHHHhcCCCEEEE---CCHH-HHHHHHHhcCCCCCEEEECCH-----HHHHHHHHHHHHhCCeEEEE-cC--CHH
Confidence 445667777788999988 8876 56777888887 55 2332 35788899999999888773 33 676
Q ss_pred HHHHhhcc-----C-CEEEEEeecCCCCCCccchhHHHHHHHHHHHh---hhcCCCCeEEEecCCCh-----h--cHHHH
Q 023494 180 AIECVLDV-----V-DLVLIMSVNPGFGGQSFIESQVKKISDLRRMC---LEKGVNPWIEVDGGVGP-----K--NAYKV 243 (281)
Q Consensus 180 ~~~~~l~~-----v-D~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~---~~~~~~~~I~VDGGI~~-----e--~i~~~ 243 (281)
.++++... + |.| .+||.++ ..++++.++++|+.. ..+.+.+++ -+|++. + .+..+
T Consensus 212 ~l~~lv~~a~~~Gi~~Ii----LDP~~~~---~~~sl~~~~~IR~~al~~~d~~lg~P~--i~~vs~~d~~~ea~lA~~~ 282 (445)
T 2h9a_A 212 ALAELVQKITALGYKNLI----LDPQPEN---ISEGLFYQTQIRRLAIKKLFRPFGYPT--IAFALDENPYQAVMEASVY 282 (445)
T ss_dssp HHHHHHHHHHHTTCCCEE----EECCCSS---HHHHHHHHHHHHHHHHHSCCGGGCSCB--EEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCcEE----EcCCchh---HHHHHHHHHHHHHhhhcCCCcccCCCe--eecCCchhHHHHHHHHHHH
Confidence 66665443 3 334 4898744 345677777777763 222234443 344432 2 33455
Q ss_pred HHcCCcEEEE
Q 023494 244 IEAGANALVA 253 (281)
Q Consensus 244 ~~aGAD~~Vv 253 (281)
...|||++++
T Consensus 283 ~~~GasIl~~ 292 (445)
T 2h9a_A 283 IAKYAGIIVL 292 (445)
T ss_dssp HHTTCSEEEE
T ss_pred HHcCCeEEEe
Confidence 8899999987
No 258
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=95.08 E-value=0.27 Score=45.52 Aligned_cols=174 Identities=17% Similarity=0.163 Sum_probs=99.0
Q ss_pred CHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEE------ec---Chh----hHHHHHHHc
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLM------IV---EPE----QRVPDFIKA 137 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLm------v~---dp~----~~i~~~~~a 137 (281)
++++.+......|++-|=+ |. .||....... .++..+.+|+= .. .|. --++.+.+.
T Consensus 54 ~~K~lv~~~~~~~asaILl---D~------~~G~~a~~~~--~~~~GLii~~E~~G~~~~~~gr~p~~l~~~sve~a~~~ 122 (332)
T 3iv3_A 54 ELKVLVSEELTPYASSILL---DP------EYGLPAAQAR--DREAGLLLAYEKTGYDANTTSRLPDCLVDWSIKRLKEA 122 (332)
T ss_dssp HHHHHHHHHHGGGSSEEEE---CT------TTCHHHHHTS--CTTCEEEEECBCCCCCTTSSCCCCCBCTTCCHHHHHHT
T ss_pred HHHHHHHHHHhcCCcEEEE---ch------hhCHHHhccc--cCCCcEEEEeccCCCCcCCCCCCCccccccCHHHHHHc
Confidence 3444455555667776633 33 2566666532 24566777771 10 111 127889999
Q ss_pred CCCEEEEccccccc----------ccHHHHHHHHHHcCCcEEEEE--CCC-----CC----------HHH-HHHh--hc-
Q 023494 138 GADIVSVHCEQSST----------IHLHRTLNQIKDLGAKAGVVL--NPA-----TS----------LSA-IECV--LD- 186 (281)
Q Consensus 138 GAd~Itvh~Ea~~~----------~~i~~~l~~ik~~G~k~Glai--~p~-----t~----------ie~-~~~~--l~- 186 (281)
|||.|.+|.--.+. ..+.++.+++++.|+.+-+.+ .|. .+ +.. .+.. ++
T Consensus 123 GADAVk~lv~~g~d~~~e~~~~q~~~l~rv~~ec~~~GiPlllEil~y~~~~~~~~~~~~a~~~p~~V~~a~R~~~~~el 202 (332)
T 3iv3_A 123 GADAVKFLLYYDVDGDPQVNVQKQAYIERIGSECQAEDIPFFLEILTYDETISNNSSVEFAKVKVHKVNDAMKVFSAERF 202 (332)
T ss_dssp TCSEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECBTTBSCTTSHHHHTTHHHHHHHHHHHHTSGGG
T ss_pred CCCEEEEEEEcCCCchHHHHHHHHHHHHHHHHHHHHcCCceEEEEeccCCCCCCCcchhhhccCHHHHHHHHHHHhhcCc
Confidence 99999999532111 246677888999999988743 332 11 111 1222 12
Q ss_pred cCCEEEE-EeecC----CCCC-Cc-cc-hhHHHHHHHHHHHhhhcCCCCe-EEEecCCChh----cHHHHHHcCC--cEE
Q 023494 187 VVDLVLI-MSVNP----GFGG-QS-FI-ESQVKKISDLRRMCLEKGVNPW-IEVDGGVGPK----NAYKVIEAGA--NAL 251 (281)
Q Consensus 187 ~vD~Ilv-msV~p----G~~G-Q~-f~-~~~l~kI~~lr~l~~~~~~~~~-I~VDGGI~~e----~i~~~~~aGA--D~~ 251 (281)
.+|++=+ +++++ ||+. +. +. .+..+..+ +.... -..+ |...||.+.+ ++....++|| ..+
T Consensus 203 GaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~---~~~~a--~~~P~v~lsgG~~~~~fl~~v~~A~~aGa~f~Gv 277 (332)
T 3iv3_A 203 GIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFR---EQEAS--TDLPYIYLSAGVSAELFQETLVFAHKAGAKFNGV 277 (332)
T ss_dssp CCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHH---HHHHT--CSSCEEEECTTCCHHHHHHHHHHHHHHTCCCCEE
T ss_pred CCcEEEEecCCChhhhcccccccccccHHHHHHHHH---HHHhc--CCCCEEEECCCCCHHHHHHHHHHHHHcCCCcceE
Confidence 3787643 23333 3432 11 11 12222233 33222 2356 4569999854 6667789999 999
Q ss_pred EEcccccCC
Q 023494 252 VAGSAVFGA 260 (281)
Q Consensus 252 VvGSaIf~a 260 (281)
.+|+++|+.
T Consensus 278 ~~GRnvwq~ 286 (332)
T 3iv3_A 278 LCGRATWAG 286 (332)
T ss_dssp EECHHHHTT
T ss_pred EeeHHHHHh
Confidence 999999985
No 259
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=95.06 E-value=0.61 Score=42.21 Aligned_cols=188 Identities=12% Similarity=0.147 Sum_probs=115.5
Q ss_pred EEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCc--ccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCC
Q 023494 62 PSILSANFAKLGEQVKAVELAGCDWIHVDVMDGR--FVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGA 139 (281)
Q Consensus 62 pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~--fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGA 139 (281)
|..=+-++..+.-.++.+++.+...| +-+-.|. |.+ +......++.+.+..+.|+-+||==..-..++..++++|.
T Consensus 21 ~AfNv~n~e~~~avl~AAe~~~sPvI-lq~s~~~~~y~g-~~~~~~~v~~~a~~~~VPValHlDHg~~~e~i~~ai~~GF 98 (286)
T 1gvf_A 21 PAFNIHNAETIQAILEVCSEMRSPVI-LAGTPGTFKHIA-LEEIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGV 98 (286)
T ss_dssp EEEECCSHHHHHHHHHHHHHHTCCCE-EEECTTHHHHSC-HHHHHHHHHHHHHHTTSCBEEEEEEECCHHHHHHHHHTTC
T ss_pred EEEeeCCHHHHHHHHHHHHHhCCCEE-EECChhHHhhcC-HHHHHHHHHHHHHhCCCcEEEEcCCCCCHHHHHHHHHcCC
Confidence 33333344444556677777777765 5444442 221 1111234444444467999999976544567888999998
Q ss_pred CEEEEcccccc----cccHHHHHHHHHHcCCcEEEEE------------C----CCCCHHHHHHhhc--cCCEEEE--Ee
Q 023494 140 DIVSVHCEQSS----TIHLHRTLNQIKDLGAKAGVVL------------N----PATSLSAIECVLD--VVDLVLI--MS 195 (281)
Q Consensus 140 d~Itvh~Ea~~----~~~i~~~l~~ik~~G~k~Glai------------~----p~t~ie~~~~~l~--~vD~Ilv--ms 195 (281)
+.|-+=.-..+ ...-+++++.+++.|+-+-.-| . .-|..++..++.+ .+|.+.+ .+
T Consensus 99 tSVMiDgS~lp~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgg~ed~~~~~~~~~~~T~Peea~~Fv~~TgvD~LAvaiGt 178 (286)
T 1gvf_A 99 RSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELTGVDSLAVAIGT 178 (286)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCC-----------CCSSCCHHHHHHHHHHHCCSEEEECSSC
T ss_pred CeEEECCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCcccCcccccccccCCCHHHHHHHHHHHCCCEEEeecCc
Confidence 77766543222 1224577888888887652111 0 1277777888775 4897654 23
Q ss_pred ecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEec--CCChhcHHHHHHcCCcEEEEccccc
Q 023494 196 VNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDG--GVGPKNAYKVIEAGANALVAGSAVF 258 (281)
Q Consensus 196 V~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDG--GI~~e~i~~~~~aGAD~~VvGSaIf 258 (281)
+|--+.|.+ .-.+++|+++++.. ++++..=| |+..+.++++++.|+.-+=+++.+.
T Consensus 179 ~HG~Y~~~p--~Ld~~~L~~I~~~~-----~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~Tdl~ 236 (286)
T 1gvf_A 179 AHGLYSKTP--KIDFQRLAEIREVV-----DVPLVLHGASDVPDEFVRRTIELGVTKVNVATELK 236 (286)
T ss_dssp CSSCCSSCC--CCCHHHHHHHHHHC-----CSCEEECCCTTCCHHHHHHHHHTTEEEEEECHHHH
T ss_pred cccCcCCCC--ccCHHHHHHHHHhc-----CCCEEEECCCCCCHHHHHHHHHCCCeEEEEChHHH
Confidence 341122321 12256666666664 37888888 6778899999999999999998873
No 260
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=95.00 E-value=0.17 Score=46.71 Aligned_cols=170 Identities=18% Similarity=0.154 Sum_probs=92.8
Q ss_pred CHHHHHHHHH-HcCCCeEEEEee-eCcccccc-c----CCHHHHHHcCcCCCCCeeEE---EEecChhhHHHHHHHcCCC
Q 023494 71 KLGEQVKAVE-LAGCDWIHVDVM-DGRFVPNI-T----IGPLVVDALRPVTDLPLDVH---LMIVEPEQRVPDFIKAGAD 140 (281)
Q Consensus 71 ~l~~~l~~l~-~~G~d~iHiDIm-DG~fvpn~-~----~G~~~I~~ir~~t~~~idaH---Lmv~dp~~~i~~~~~aGAd 140 (281)
+..+..+.+. +.|+|+| ||- ++ .-|+. . .-.+.++.+++.++.|+.++ =-+.||. .++.+.++|++
T Consensus 81 ~~~~~A~~~v~~~GAdiI--DIg~eS-trP~~~~vs~ee~~~~V~~v~~~~~vPlsIDg~~~~T~~~e-V~eaAleagag 156 (323)
T 4djd_D 81 EPGRWAQKCVAEYGADLI--YLKLDG-ADPEGANHSVDQCVATVKEVLQAVGVPLVVVGCGDVEKDHE-VLEAVAEAAAG 156 (323)
T ss_dssp CHHHHHHHHHHTTCCSEE--EEECGG-GCTTTTCCCHHHHHHHHHHHHHHCCSCEEEECCSCHHHHHH-HHHHHHHHTTT
T ss_pred hHHHHHHHHHHHcCCCEE--EEcCcc-CCCCCCCCCHHHHHHHHHHHHhhCCceEEEECCCCCCCCHH-HHHHHHHhcCC
Confidence 4556666666 8899986 663 32 22431 1 12334666666566665542 0023443 56777888876
Q ss_pred ---EE-EEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhc---c--C--CEEEEEeecCCCCC-Cccchh
Q 023494 141 ---IV-SVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD---V--V--DLVLIMSVNPGFGG-QSFIES 208 (281)
Q Consensus 141 ---~I-tvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~---~--v--D~IlvmsV~pG~~G-Q~f~~~ 208 (281)
.| .+..+ ...+.+..++++|..+.+.- |. .++.++++.. . + +-|++ +||++. -+-..+
T Consensus 157 ~~~lINsv~~~-----~~~~m~~laa~~g~~vVlmh-~~-d~~~~~~l~~~a~~~GI~~e~IIl---DPg~g~fgk~~e~ 226 (323)
T 4djd_D 157 ENLLLGNAEQE-----NYKSLTAACMVHKHNIIARS-PL-DINICKQLNILINEMNLPLDHIVI---DPSIGGLGYGIEY 226 (323)
T ss_dssp SCCEEEEEBTT-----BCHHHHHHHHHHTCEEEEEC-SS-CHHHHHHHHHHHHTTTCCGGGEEE---ECCCCCTTTTHHH
T ss_pred CCCeEEECCcc-----cHHHHHHHHHHhCCeEEEEc-cc-hHHHHHHHHHHHHHcCCCHHHEEE---eCCCccccCCHHH
Confidence 22 22222 24578888899998777643 32 3444444432 2 3 33443 898851 112345
Q ss_pred HHHHHHHHHHH-hh-hcCCCCeEEEe--------------------------cCCChh--cHHHHHHcCCcEEEEc
Q 023494 209 QVKKISDLRRM-CL-EKGVNPWIEVD--------------------------GGVGPK--NAYKVIEAGANALVAG 254 (281)
Q Consensus 209 ~l~kI~~lr~l-~~-~~~~~~~I~VD--------------------------GGI~~e--~i~~~~~aGAD~~VvG 254 (281)
.++.++++|.. +. .+.+++++-+. -|+-.| +...++.+|+|++|+-
T Consensus 227 ~l~~l~~ir~~al~~~~~lg~PvL~GvSrksf~~ke~~~~~~~~~~~g~~~~~~~~~E~~~a~~~~~~~~~i~v~~ 302 (323)
T 4djd_D 227 SFSIMERIRLGALQGDKMLSMPVICTVGYEAWRAKEASAPVSEYPGWGKETERGILWEAVTATALLQAGAHILLMR 302 (323)
T ss_dssp HHHHHHHHHHHHHHTCGGGCSCBEEEHHHHHHTSHHHHCCTTTCGGGCCHHHHHHHHHHHHHHHHHTTTCSEEEEC
T ss_pred HHHHHHHHHHHhhcccccCCCCEEEecchhhhhhccccccccccccccccchhhHHHHHHHHHHHHHhcCCEEEEc
Confidence 66777777763 11 12345666442 111122 3456788999999974
No 261
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=94.94 E-value=0.35 Score=42.36 Aligned_cols=118 Identities=11% Similarity=0.153 Sum_probs=75.1
Q ss_pred CceEeEEEec-cCccCHHHHHHHHHHcCCCeEEEEeeeCcccccc--cCCHHHHHHcCcCC-CCCeeEEEEecC------
Q 023494 57 DIIVSPSILS-ANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNI--TIGPLVVDALRPVT-DLPLDVHLMIVE------ 126 (281)
Q Consensus 57 ~~~i~pSila-~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~--~~G~~~I~~ir~~t-~~~idaHLmv~d------ 126 (281)
..+|+.+|.. -+...+.++++.+.+.|+|.+++.+ |- ..+. ..=.+.++.+|+.+ ++|+.+++-...
T Consensus 3 ~p~Icvpi~~~~~~~e~~~~~~~~~~~~~D~vElRv-D~--l~~~~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~~ 79 (238)
T 1sfl_A 3 HVEVVATITPQLSIEETLIQKINHRIDAIDVLELRI-DQ--FENVTVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQ 79 (238)
T ss_dssp CCEEEEEECCCC---CHHHHHHHHTTTTCSEEEEEC-TT--STTCCHHHHHHHHHHHC---CCSEEEEECCBGGGTSCBC
T ss_pred CCeEEEEecCCCCHHHHHHHHHHhhhcCCCEEEEEe-cc--cccCCHHHHHHHHHHHHHhccCCCEEEEeeccccCCCCC
Confidence 3578999998 8888888888888888999999873 21 1211 11123456678875 689988886532
Q ss_pred --hhhHHHH---HHHc-CCCEEEEccccc-ccccHHHHHHHHHHcCCcEEEEECC--CCC
Q 023494 127 --PEQRVPD---FIKA-GADIVSVHCEQS-STIHLHRTLNQIKDLGAKAGVVLNP--ATS 177 (281)
Q Consensus 127 --p~~~i~~---~~~a-GAd~Itvh~Ea~-~~~~i~~~l~~ik~~G~k~Glai~p--~t~ 177 (281)
...|++. +.+. ++|+|-+-.... +.+...++++.+++.|.|+.+..+. .||
T Consensus 80 ~~~~~~~~ll~~~~~~~~~d~iDvEl~~~~~~~~~~~l~~~~~~~~~kvI~S~Hdf~~tp 139 (238)
T 1sfl_A 80 FTNDSYLNLISDLANINGIDMIDIEWQADIDIEKHQRIITHLQQYNKEVIISHHNFESTP 139 (238)
T ss_dssp CCHHHHHHHHHHGGGCTTCCEEEEECCTTSCHHHHHHHHHHHHHTTCEEEEEEEESSCCC
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEEccCCCChHHHHHHHHHHHhcCCEEEEEecCCCCCc
Confidence 2345544 3455 699999987630 1234667888888999999998652 455
No 262
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=94.91 E-value=0.16 Score=46.03 Aligned_cols=114 Identities=17% Similarity=0.269 Sum_probs=67.3
Q ss_pred HHHHHHcCCCEEEEccccc-----ccccHHHHHHHHHHc-C---CcEEEEECCCCCHHHHHHh---hc--cCCEEEEEee
Q 023494 131 VPDFIKAGADIVSVHCEQS-----STIHLHRTLNQIKDL-G---AKAGVVLNPATSLSAIECV---LD--VVDLVLIMSV 196 (281)
Q Consensus 131 i~~~~~aGAd~Itvh~Ea~-----~~~~i~~~l~~ik~~-G---~k~Glai~p~t~ie~~~~~---l~--~vD~IlvmsV 196 (281)
++.+.+.|||-|-++..-. ..+.+.+.++.+++. + +|+.+...--|+ +.+... .. .+|+|= |
T Consensus 132 a~~Ai~~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~Lt~-eei~~A~~ia~eaGADfVK--T- 207 (288)
T 3oa3_A 132 AKRAMQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQLTA-DEIIAGCVLSSLAGADYVK--T- 207 (288)
T ss_dssp HHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCH-HHHHHHHHHHHHTTCSEEE--C-
T ss_pred HHHHHHcCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCCCCH-HHHHHHHHHHHHcCCCEEE--c-
Confidence 5567899999999886531 112355556666654 2 233332221122 322222 11 379884 2
Q ss_pred cCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEE
Q 023494 197 NPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANAL 251 (281)
Q Consensus 197 ~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~ 251 (281)
..||+.. ..+++.++-+++.++..+..+.|-+.|||+ .+++..++++||+-+
T Consensus 208 STGf~~~---GAT~edv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~aGA~Ri 260 (288)
T 3oa3_A 208 STGFNGP---GASIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRAGAERL 260 (288)
T ss_dssp CCSSSSC---CCCHHHHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred CCCCCCC---CCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCcee
Confidence 2566522 234555566666654323468899999999 789999999999954
No 263
>3r79_A Uncharacterized protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium, TIM barrel; HET: PLP; 1.90A {Agrobacterium tumefaciens}
Probab=94.90 E-value=0.53 Score=41.52 Aligned_cols=168 Identities=16% Similarity=0.143 Sum_probs=90.8
Q ss_pred HHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEccccccccc
Q 023494 74 EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIH 153 (281)
Q Consensus 74 ~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~~~~~ 153 (281)
+.++.+.++|++++=+ .++ ..+.+..+.+... ..++..|+.=.-+.+.++.+++. +|++..-. +.+.
T Consensus 43 ~~i~~~~~~G~~~fge-----n~v---qEa~~kr~~~~~~-~~~i~wh~iG~lq~nk~~~~v~~-~~~i~sVd---s~~~ 109 (244)
T 3r79_A 43 EAIQPVIDAGQRVFGE-----NRV---QEAQGKWPALKEK-TSDIELHLIGPLQSNKAADAVAL-FDVVESID---REKI 109 (244)
T ss_dssp HHHHHHHHTTCCEEEE-----SCH---HHHHHHHHHHHHH-STTCEEEECSCCCGGGHHHHHHH-CSEEEEEC---SHHH
T ss_pred HHHHHHHHCCCCEEEE-----eeH---HHHHHHHHhcccc-CCCeEEEecCCCCHHHHHHHHHH-CCEEEeeC---CHHH
Confidence 4567888899997622 222 2333333333210 01345555332223345555532 46643221 1334
Q ss_pred HHHHHHHHHHcCCcEEE--EECCCC-------CHHHHHHhh------ccCCEEEEEeecCCCCCCccchhHHHHHHHHHH
Q 023494 154 LHRTLNQIKDLGAKAGV--VLNPAT-------SLSAIECVL------DVVDLVLIMSVNPGFGGQSFIESQVKKISDLRR 218 (281)
Q Consensus 154 i~~~l~~ik~~G~k~Gl--ai~p~t-------~ie~~~~~l------~~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~ 218 (281)
+.++-+.+.+.|..+-+ -+|.++ +.+.+.+++ +.+.+..+||..|-... + ...+.+++++++
T Consensus 110 a~~L~~~a~~~g~~~~V~LqVdtG~e~~R~Gv~~ee~~~l~~~i~~l~~L~l~GlmTh~a~~dd-~--~~~f~~l~~l~~ 186 (244)
T 3r79_A 110 ARALSEECARQGRSLRFYVQVNTGLEPQKAGIDPRETVAFVAFCRDELKLPVEGLMCIPPAEEN-P--GPHFALLAKLAG 186 (244)
T ss_dssp HHHHHHHHHHHTCCCEEEEEBCTTCCTTSCSBCHHHHHHHHHHHHHTSCCCCCEEECCCCTTSC-S--HHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCceEEEEEECCCCcCCCCCCHHHHHHHHHHHHcCCCCEEEEEEecCCCCCC-H--HHHHHHHHHHHH
Confidence 55555666677765555 455431 123333332 34677788886442222 1 145666666665
Q ss_pred HhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEcccccCCCCHH
Q 023494 219 MCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAKDYA 264 (281)
Q Consensus 219 l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a~dp~ 264 (281)
.++ +. .+-+|.+.+ +...++.|++.+=+|++||+..++.
T Consensus 187 ~l~-----~~-~lSmGmS~d-~~~Ai~~G~t~vRvGtaIfg~r~~~ 225 (244)
T 3r79_A 187 QCG-----LE-KLSMGMSGD-FETAVEFGATSVRVGSAIFGSRAEN 225 (244)
T ss_dssp HHT-----CC-EEECCCTTT-HHHHHHTTCSEEEECHHHHCCHHHH
T ss_pred hCC-----CC-EEEeecchh-HHHHHHcCCCEEEeeHHHhCCCchh
Confidence 542 23 478898874 4556889999999999999865443
No 264
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=94.77 E-value=0.62 Score=43.54 Aligned_cols=185 Identities=14% Similarity=0.094 Sum_probs=107.8
Q ss_pred CHHHHHHHHHHcCCCeEEEEeeeCcccccccC-CHHHHHHcCcC-CCCCeeEEEEecChhhHHHHHHH----cCCCEEEE
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITI-GPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIK----AGADIVSV 144 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~-G~~~I~~ir~~-t~~~idaHLmv~dp~~~i~~~~~----aGAd~Itv 144 (281)
+-.+.++.|.+.|+++|++ | | |..+- ..+.++++++. .+..+-+..- .++. -++.+.+ +|++.|++
T Consensus 35 ~Kl~ia~~L~~~Gv~~IE~----g-~-p~~~~~d~e~v~~i~~~~~~~~i~~l~r-~~~~-di~~a~~al~~ag~~~v~i 106 (370)
T 3rmj_A 35 EKIRVARQLEKLGVDIIEA----G-F-AAASPGDFEAVNAIAKTITKSTVCSLSR-AIER-DIRQAGEAVAPAPKKRIHT 106 (370)
T ss_dssp HHHHHHHHHHHHTCSEEEE----E-E-GGGCHHHHHHHHHHHTTCSSSEEEEEEE-SSHH-HHHHHHHHHTTSSSEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEE----e-C-CCCCHHHHHHHHHHHHhCCCCeEEEEec-CCHH-HHHHHHHHHhhCCCCEEEE
Confidence 3335556777889999888 3 2 32111 12456665543 3344444322 2332 3455555 89999888
Q ss_pred cccccccc---------------cHHHHHHHHHHcCCcEEEEE--CCCCCHHHHHHhhcc-----CCEEEEEeecCCCCC
Q 023494 145 HCEQSSTI---------------HLHRTLNQIKDLGAKAGVVL--NPATSLSAIECVLDV-----VDLVLIMSVNPGFGG 202 (281)
Q Consensus 145 h~Ea~~~~---------------~i~~~l~~ik~~G~k~Glai--~p~t~ie~~~~~l~~-----vD~IlvmsV~pG~~G 202 (281)
..-.. .. .+.+.++.+|++|..+.+.. ...++.+.+.++.+. +|.|.+- -..|
T Consensus 107 f~~~S-d~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~ed~~r~~~~~~~~~~~~~~~~Ga~~i~l~----DT~G 181 (370)
T 3rmj_A 107 FIATS-PIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCEDALRSEIDFLAEICGAVIEAGATTINIP----DTVG 181 (370)
T ss_dssp EEECS-HHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEETGGGSCHHHHHHHHHHHHHHTCCEEEEE----CSSS
T ss_pred EecCc-HHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecCCCCccCHHHHHHHHHHHHHcCCCEEEec----CccC
Confidence 75432 11 23457778889998876654 234666666665442 6777652 2234
Q ss_pred CccchhHHHHHHHHHHHhhhcCCCCeEEE----ecCCChhcHHHHHHcCCcEEEEccccc------CCCCHHHHHHHHH
Q 023494 203 QSFIESQVKKISDLRRMCLEKGVNPWIEV----DGGVGPKNAYKVIEAGANALVAGSAVF------GAKDYAEAIKGIK 271 (281)
Q Consensus 203 Q~f~~~~l~kI~~lr~l~~~~~~~~~I~V----DGGI~~e~i~~~~~aGAD~~VvGSaIf------~a~dp~~~~~~l~ 271 (281)
-....++.+.++.+++.++.. .+.+|++ |-|.-..|.-..+++||+.|= ++|. ++.+.++.+..|+
T Consensus 182 ~~~P~~~~~lv~~l~~~~~~~-~~~~l~~H~Hnd~GlAvAN~laAv~aGa~~vd--~tv~GlGeraGN~~lE~vv~~L~ 257 (370)
T 3rmj_A 182 YSIPYKTEEFFRELIAKTPNG-GKVVWSAHCHNDLGLAVANSLAALKGGARQVE--CTVNGLGERAGNASVEEIVMALK 257 (370)
T ss_dssp CCCHHHHHHHHHHHHHHSTTG-GGSEEEEECBCTTSCHHHHHHHHHHTTCCEEE--EBGGGCSSTTCBCBHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHhCCCc-CceEEEEEeCCCCChHHHHHHHHHHhCCCEEE--EeccccCcccccccHHHHHHHHH
Confidence 333344566677777765421 0156777 889998899999999999763 3332 2345565555554
No 265
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=94.76 E-value=0.21 Score=43.05 Aligned_cols=123 Identities=9% Similarity=0.038 Sum_probs=82.2
Q ss_pred CceEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcC---CCCCeeEEEEe-c-Ch---h
Q 023494 57 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV---TDLPLDVHLMI-V-EP---E 128 (281)
Q Consensus 57 ~~~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~---t~~~idaHLmv-~-dp---~ 128 (281)
.++|+-+.++.--..+++.++.+.+.|.+.+++.. .++ | ....+..++++|+. .++.+.++--. . .. .
T Consensus 17 ~~klg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~--~~~-~-~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~ 92 (257)
T 3lmz_A 17 PFHLGMAGYTFVNFDLDTTLKTLERLDIHYLCIKD--FHL-P-LNSTDEQIRAFHDKCAAHKVTGYAVGPIYMKSEEEID 92 (257)
T ss_dssp SSEEEECGGGGTTSCHHHHHHHHHHTTCCEEEECT--TTS-C-TTCCHHHHHHHHHHHHHTTCEEEEEEEEEECSHHHHH
T ss_pred ceEEEEEEEeecCCCHHHHHHHHHHhCCCEEEEec--ccC-C-CCCCHHHHHHHHHHHHHcCCeEEEEeccccCCHHHHH
Confidence 35788888887667899999999999999988742 222 2 23345555555442 45554432221 1 11 2
Q ss_pred hHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEEC-CC----CCHHHHHHhhc
Q 023494 129 QRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLN-PA----TSLSAIECVLD 186 (281)
Q Consensus 129 ~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~-p~----t~ie~~~~~l~ 186 (281)
+.++.+.+.|+..|.+|.. .+.+.++.+.++++|+++++--. |. ...+.+..+++
T Consensus 93 ~~i~~A~~lGa~~v~~~p~---~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~ll~ 152 (257)
T 3lmz_A 93 RAFDYAKRVGVKLIVGVPN---YELLPYVDKKVKEYDFHYAIHLHGPDIKTYPDATDVWVHTK 152 (257)
T ss_dssp HHHHHHHHHTCSEEEEEEC---GGGHHHHHHHHHHHTCEEEEECCCTTCSSSCSHHHHHHHHT
T ss_pred HHHHHHHHhCCCEEEecCC---HHHHHHHHHHHHHcCCEEEEecCCCcccccCCHHHHHHHHH
Confidence 3566778899999999864 35688999999999999988655 32 23455556655
No 266
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=94.70 E-value=0.15 Score=48.39 Aligned_cols=127 Identities=13% Similarity=0.252 Sum_probs=74.9
Q ss_pred HHHcCCCEEEEccccc--------c-----c-----------ccHHHHHHHHHHc-CC-cEEEEECCCCC----------
Q 023494 134 FIKAGADIVSVHCEQS--------S-----T-----------IHLHRTLNQIKDL-GA-KAGVVLNPATS---------- 177 (281)
Q Consensus 134 ~~~aGAd~Itvh~Ea~--------~-----~-----------~~i~~~l~~ik~~-G~-k~Glai~p~t~---------- 177 (281)
+.++|.|+|-+|.-.. + + .-+.++++++|+. |. .+|+=++|...
T Consensus 177 a~~aGfdgveih~~~GYLl~QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~~~~~~~~v~~r~~~~~~~~g~~~~~d~ 256 (407)
T 3tjl_A 177 AMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLSTIVGADKIGIRISPWATFQNMKAHKDT 256 (407)
T ss_dssp HHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGGGCCGGGSS
T ss_pred HHHhCCCeEEECCccchHHHHhcCccccccCCcCCCChhhChHHHHHHHHHHHHHhCCCeEEEEECcccccCCCcccccc
Confidence 4678999999997541 0 0 0155777777764 42 68888887431
Q ss_pred ---HHH----HHHh---hc-c--CCEEEEEeecCCCCCCccchhH--HHHHHHHHHHhhhcCCCCeEEEecCCChhc-HH
Q 023494 178 ---LSA----IECV---LD-V--VDLVLIMSVNPGFGGQSFIESQ--VKKISDLRRMCLEKGVNPWIEVDGGVGPKN-AY 241 (281)
Q Consensus 178 ---ie~----~~~~---l~-~--vD~IlvmsV~pG~~GQ~f~~~~--l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~-i~ 241 (281)
.+. ++.+ .+ . +|||-+. ++.+.++...+.. .+.++.+++.. +.++.+-|||+.+. +.
T Consensus 257 ~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~--~~~~~~~~~~~~~~~~~~~~~ir~~~-----~~PvI~~Ggi~~~~dA~ 329 (407)
T 3tjl_A 257 VHPLTTFSYLVHELQQRADKGQGIAYISVV--EPRVSGNVDVSEEDQAGDNEFVSKIW-----KGVILKAGNYSYDAPEF 329 (407)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCCCSEEEEE--CTTEETTEECCGGGCCCCSHHHHHHC-----CSEEEEESCGGGGTTTT
T ss_pred cccHHHHHHHHHHHHhHhhcCCceeEEEEE--ccccCCCCcCCccchhHHHHHHHHHh-----CCCEEecCCCCCHHHHH
Confidence 222 2222 11 2 8888765 2332222111100 01234445443 25788899999655 65
Q ss_pred HHHHc----CCcEEEEcccccCCCCHHHHH
Q 023494 242 KVIEA----GANALVAGSAVFGAKDYAEAI 267 (281)
Q Consensus 242 ~~~~a----GAD~~VvGSaIf~a~dp~~~~ 267 (281)
++++. ++|.+.+|++.+..+|..+.+
T Consensus 330 ~~i~~~~~g~aDlVa~GR~~iaNPdL~~ri 359 (407)
T 3tjl_A 330 KTLKEDIADKRTLVGFSRYFTSNPNLVWKL 359 (407)
T ss_dssp HHHHHHHTTSSEEEECSHHHHHCTTHHHHH
T ss_pred HHHHhhccCCCeEEEeChhhhhCchHHHHH
Confidence 55554 599999999999888865444
No 267
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=94.67 E-value=0.7 Score=41.35 Aligned_cols=98 Identities=14% Similarity=0.229 Sum_probs=60.1
Q ss_pred CccCHHHHHHHHHHcCCCeEEEEeeeCcccc-cccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHc--CCCEEE-
Q 023494 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFVP-NITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA--GADIVS- 143 (281)
Q Consensus 68 D~~~l~~~l~~l~~~G~d~iHiDImDG~fvp-n~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~a--GAd~It- 143 (281)
|.....+..+.+.+.|+|+|-|- =+.... ...-=..+|+.+++.++.|+-+| +.+|. .++.+.++ |+++|-
T Consensus 32 ~~~~a~~~a~~~v~~GAdiIDIg--~~s~~~eE~~rv~~vi~~l~~~~~~pisID--T~~~~-v~~aal~a~~Ga~iINd 106 (271)
T 2yci_X 32 DPRPIQEWARRQAEKGAHYLDVN--TGPTADDPVRVMEWLVKTIQEVVDLPCCLD--STNPD-AIEAGLKVHRGHAMINS 106 (271)
T ss_dssp CCHHHHHHHHHHHHTTCSEEEEE--CCSCSSCHHHHHHHHHHHHHHHCCCCEEEE--CSCHH-HHHHHHHHCCSCCEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEc--CCcCchhHHHHHHHHHHHHHHhCCCeEEEe--CCCHH-HHHHHHHhCCCCCEEEE
Confidence 44455566667778999987553 211011 01112334666666566776653 44655 56777888 999996
Q ss_pred EcccccccccHHHHHHHHHHcCCcEEEEEC
Q 023494 144 VHCEQSSTIHLHRTLNQIKDLGAKAGVVLN 173 (281)
Q Consensus 144 vh~Ea~~~~~i~~~l~~ik~~G~k~Glai~ 173 (281)
+..+ .+.+.+.+..++++|..+.+.-.
T Consensus 107 vs~~---~d~~~~~~~~~a~~~~~vv~m~~ 133 (271)
T 2yci_X 107 TSAD---QWKMDIFFPMAKKYEAAIIGLTM 133 (271)
T ss_dssp ECSC---HHHHHHHHHHHHHHTCEEEEESC
T ss_pred CCCC---ccccHHHHHHHHHcCCCEEEEec
Confidence 6665 13346788889999986665543
No 268
>3rlg_A Sphingomyelin phosphodiesterase D lisictox-alphai; TIM beta/alpha-barrel, PLC-like phosphodiesterase, inactive H12A phospholipase D; HET: PGE; 1.60A {Loxosceles intermedia} PDB: 3rlh_A*
Probab=94.66 E-value=0.82 Score=41.65 Aligned_cols=188 Identities=10% Similarity=0.058 Sum_probs=109.5
Q ss_pred cCHHHHHHHHHHcCCCeEEEEee---eCc------ccccccC---C-----HHHHHHcCcCC--C--------CCeeEEE
Q 023494 70 AKLGEQVKAVELAGCDWIHVDVM---DGR------FVPNITI---G-----PLVVDALRPVT--D--------LPLDVHL 122 (281)
Q Consensus 70 ~~l~~~l~~l~~~G~d~iHiDIm---DG~------fvpn~~~---G-----~~~I~~ir~~t--~--------~~idaHL 122 (281)
.|.-++++.+.+.|+++|++||. ||. -+|.-.+ + .+.++.||+.| + ..+..||
T Consensus 36 vNTl~~~~~a~~~GAn~IE~DV~~~~dg~~v~~hhg~pcdc~r~C~~~~~~~~~l~~lr~~ttpg~~k~~~~l~lv~~Dl 115 (302)
T 3rlg_A 36 VNAIGQIDEFVNLGANSIETDVSFDDNANPEYTYHGIPCDCGRNCKKYENFNDFLKGLRSATTPGNSKYQEKLVLVVFDL 115 (302)
T ss_dssp CCSHHHHHHHHHTTCSEEEEEECBCTTSCBCBCCCCSSCCTTCCSCCCCBHHHHHHHHHHHHSTTSTTCCTTCCEEEEEE
T ss_pred hhhHHHHHHHHHcCCCEEEEEEEECCCCCEEEEECCCCcchhccCCCCccHHHHHHHHHHhcCCCCCccccceEEEEEEc
Confidence 56667899999999999999975 331 0232111 1 56788887752 1 3577899
Q ss_pred EecChh---------hHHHH----HHH---cCC-CEEEEccccc-ccccHHHHHHHHHHcC-----CcEEEEECCCCCHH
Q 023494 123 MIVEPE---------QRVPD----FIK---AGA-DIVSVHCEQS-STIHLHRTLNQIKDLG-----AKAGVVLNPATSLS 179 (281)
Q Consensus 123 mv~dp~---------~~i~~----~~~---aGA-d~Itvh~Ea~-~~~~i~~~l~~ik~~G-----~k~Glai~p~t~ie 179 (281)
++.+-. ...+. +.. .|+ -.|.+..... ..+-+..+.+.+++.| -++|..+.-+.+++
T Consensus 116 K~~~l~~~~~~~aG~~la~kLl~~~w~~g~~~~ra~vilsi~~~~~~~~l~gf~~~l~~~g~~~LldkvG~Dfs~n~dl~ 195 (302)
T 3rlg_A 116 KTGSLYDNQANDAGKKLAKNLLQHYWNNGNNGGRAYIVLSIPDLNHYPLIKGFKDQLTKDGHPELMDKVGHDFSGNDDIG 195 (302)
T ss_dssp CGGGSCGGGHHHHHHHHHHHHHHHTSGGGSSCCCCEEEEEESCGGGTHHHHHHHHHHHHTTCGGGGGGEEEEECSCCCHH
T ss_pred CCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCceeEEEEecCcchHHHHHHHHHHHHhhcCHHHHhhhcCccccCCCCHH
Confidence 985441 11222 223 233 3555554421 1223555555666777 37899999888898
Q ss_pred HHHHhhcc--C-CEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcC-CCCeEEEecCCC-hhcHHHHHHcCCcEEEEc
Q 023494 180 AIECVLDV--V-DLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKG-VNPWIEVDGGVG-PKNAYKVIEAGANALVAG 254 (281)
Q Consensus 180 ~~~~~l~~--v-D~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~-~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvG 254 (281)
.+.+.+.. + +.+..- -|++.=. ....+++++..+..+..+ +-.++. -=-|| ++.++.+.+.|+|.++
T Consensus 196 ~i~~~~~~~Gi~~h~wqs---DGItnC~--~r~~~rl~~ai~~RDs~~~~i~~V~-vWTVNd~~~m~~l~~~GVDGII-- 267 (302)
T 3rlg_A 196 DVGKAYKKAGITGHIWQS---DGITNCL--PRGLSRVNAAVANRDSANGFINKVY-YWTVDKRSTTRDALDAGVDGIM-- 267 (302)
T ss_dssp HHHHHHHHTTCCSCBEEE---EECCTTS--CCCSHHHHHHHHHHTSTTCCCSEEE-EECCCSHHHHHHHHHTTCSEEE--
T ss_pred HHHHHHHhcCCcCcEEec---CCcccce--eccHHHHHHHHHhccCCCCceEEEE-EEeCCCHHHHHHHHHcCCCEEE--
Confidence 88887764 2 334331 1333322 333466666665554322 112332 23355 7899999999999987
Q ss_pred ccccCCCCHHHHHHHH
Q 023494 255 SAVFGAKDYAEAIKGI 270 (281)
Q Consensus 255 SaIf~a~dp~~~~~~l 270 (281)
.+.|....+.+
T Consensus 268 -----TD~Pd~l~~~l 278 (302)
T 3rlg_A 268 -----TNYPDVITDVL 278 (302)
T ss_dssp -----ESCHHHHHHHH
T ss_pred -----CCCHHHHHHHH
Confidence 35565444333
No 269
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=94.62 E-value=0.46 Score=44.24 Aligned_cols=111 Identities=14% Similarity=0.262 Sum_probs=69.2
Q ss_pred HHHHHHHcCCCEEEEcccccccccHHHHHHHHHHcC-CcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCCCCCCccch
Q 023494 130 RVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLG-AKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFIE 207 (281)
Q Consensus 130 ~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G-~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f~~ 207 (281)
+...+.++|.=. .+|... +.+...+.++.+|+.+ ..+|+.+..++ .+.++.+++ .+|+|.+ +.+. | ...
T Consensus 61 lA~avA~~GGlg-ii~~~~-s~e~~~~~I~~vk~~~~~pvga~ig~~~-~e~a~~l~eaGad~I~l---d~a~-G--~~~ 131 (361)
T 3khj_A 61 MAVGMARLGGIG-IIHKNM-DMESQVNEVLKVKNSGGLRVGAAIGVNE-IERAKLLVEAGVDVIVL---DSAH-G--HSL 131 (361)
T ss_dssp HHHHHHHTTCEE-EECSSS-CHHHHHHHHHHHHHTTCCCCEEEECTTC-HHHHHHHHHTTCSEEEE---CCSC-C--SBH
T ss_pred HHHHHHHcCCCe-EEecCC-CHHHHHHHHHHHHhccCceEEEEeCCCH-HHHHHHHHHcCcCeEEE---eCCC-C--CcH
Confidence 444445454322 234432 3455666777777765 45777776554 666777665 4898754 3222 2 123
Q ss_pred hHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEc
Q 023494 208 SQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAG 254 (281)
Q Consensus 208 ~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvG 254 (281)
..++.|+++++.. +.++.+.+..+.+.+..+.++|||.+++|
T Consensus 132 ~~~~~i~~i~~~~-----~~~Vivg~v~t~e~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 132 NIIRTLKEIKSKM-----NIDVIVGNVVTEEATKELIENGADGIKVG 173 (361)
T ss_dssp HHHHHHHHHHHHC-----CCEEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHHhc-----CCcEEEccCCCHHHHHHHHHcCcCEEEEe
Confidence 4456677776653 35666655567999999999999999996
No 270
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=94.57 E-value=0.22 Score=49.24 Aligned_cols=167 Identities=18% Similarity=0.210 Sum_probs=87.0
Q ss_pred CccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHc--CCCEE-EE
Q 023494 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA--GADIV-SV 144 (281)
Q Consensus 68 D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~a--GAd~I-tv 144 (281)
|+....+..+.+.+.|+|+|-|. ++...++.-..=.++++.+++.++.|+-+ -+.+|. .++.+.++ |+++| .+
T Consensus 338 ~~~~a~~~A~~~v~~GAdiIDIg-pg~~~v~~~ee~~rvv~~i~~~~~vpisI--DT~~~~-v~eaal~~~~G~~iINdi 413 (566)
T 1q7z_A 338 NEEIVIKEAKTQVEKGAEVLDVN-FGIESQIDVRYVEKIVQTLPYVSNVPLSL--DIQNVD-LTERALRAYPGRSLFNSA 413 (566)
T ss_dssp CCHHHHHHHHHHHHTTCSEEEEE-CSSGGGSCHHHHHHHHHHHHHHTCSCEEE--ECCCHH-HHHHHHHHCSSCCEEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEC-CCCCCCCHHHHHHHHHHHHHhhCCceEEE--eCCCHH-HHHHHHHhcCCCCEEEEC
Confidence 44444445566678899986443 11111111111223455555545666655 345655 56777788 99987 33
Q ss_pred cccccccccHHHHHHHHHHcCCcEEEEECCC-CC------HHHHHHhhc---c--C-CEEEEEeecCCC---C-CCccch
Q 023494 145 HCEQSSTIHLHRTLNQIKDLGAKAGVVLNPA-TS------LSAIECVLD---V--V-DLVLIMSVNPGF---G-GQSFIE 207 (281)
Q Consensus 145 h~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~-t~------ie~~~~~l~---~--v-D~IlvmsV~pG~---~-GQ~f~~ 207 (281)
..+ .+.+.+.+..++++|..+.+.-..+ +| ++.+++.++ . + +-|++ +||+ + |+
T Consensus 414 s~~---~~~~~~~~~~~~~~g~~vV~m~~~~~~p~t~~~~~~~l~~~~~~a~~~Gi~~~Iil---DPg~~~igfgk---- 483 (566)
T 1q7z_A 414 KVD---EEELEMKINLLKKYGGTLIVLLMGKDVPKSFEERKEYFEKALKILERHDFSDRVIF---DPGVLPLGAEG---- 483 (566)
T ss_dssp ESC---HHHHHHHHHHHHHHCCEEEEESCSSSCCCSHHHHHHHHHHHHHHHHHTTCGGGEEE---ECCCCCTTTTC----
T ss_pred Ccc---hhhHHHHHHHHHHhCCeEEEEeCCCCCcCCHHHHHHHHHHHHHHHHHCCCCCcEEE---eCCCCcccCcH----
Confidence 443 1334678888999998665543322 11 222222222 1 3 23433 8887 3 33
Q ss_pred hHHHHHHHHHHHhhhcCCCCeEEEecCCChh-------------cHHHHHHcCCcEEEE
Q 023494 208 SQVKKISDLRRMCLEKGVNPWIEVDGGVGPK-------------NAYKVIEAGANALVA 253 (281)
Q Consensus 208 ~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e-------------~i~~~~~aGAD~~Vv 253 (281)
+.++-|++++.+... ++++ -.|++-. -+..++++|+|++++
T Consensus 484 ~~~~~l~~~~~~~~~---g~p~--l~G~Snksf~~~~~~~l~~t~a~~a~~~G~~i~rv 537 (566)
T 1q7z_A 484 KPVEVLKTIEFISSK---GFNT--TVGLSNLSFGLPDRSYYNTAFLVLGISKGLSSAIM 537 (566)
T ss_dssp CHHHHHHHHHHHHHT---TCEE--CCBGGGGSTTSTTHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHhC---CCCE--EEEeCcccccCCHHHHHHHHHHHHHHHcCCCEEEE
Confidence 444444444444321 3454 3455322 223457899999987
No 271
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=94.53 E-value=0.027 Score=48.94 Aligned_cols=37 Identities=22% Similarity=0.306 Sum_probs=32.7
Q ss_pred CCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCCCC
Q 023494 226 NPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGAKD 262 (281)
Q Consensus 226 ~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a~d 262 (281)
++++.+.|||+ .+.+.++.++|||.+++|++.+..++
T Consensus 73 ~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~~p~ 110 (241)
T 1qo2_A 73 AEHIQIGGGIRSLDYAEKLRKLGYRRQIVSSKVLEDPS 110 (241)
T ss_dssp GGGEEEESSCCSHHHHHHHHHTTCCEEEECHHHHHCTT
T ss_pred CCcEEEECCCCCHHHHHHHHHCCCCEEEECchHhhChH
Confidence 47899999999 78999999999999999999886554
No 272
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A
Probab=94.48 E-value=0.23 Score=49.28 Aligned_cols=120 Identities=13% Similarity=0.152 Sum_probs=81.3
Q ss_pred HHHcCCCEEEEccccccccc---HHHHHHHHHH----cC------CcEEEEECCCCCHHHHHHhhccCCEEEEEeec---
Q 023494 134 FIKAGADIVSVHCEQSSTIH---LHRTLNQIKD----LG------AKAGVVLNPATSLSAIECVLDVVDLVLIMSVN--- 197 (281)
Q Consensus 134 ~~~aGAd~Itvh~Ea~~~~~---i~~~l~~ik~----~G------~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~--- 197 (281)
+.+.|...|-|+.-. +.++ ..+.++.++. .| .++|+.+....-+..+.+++..+|++.+.+.+
T Consensus 380 A~~~G~~~Im~PmV~-t~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~vDf~siGtNDLtq 458 (575)
T 2hwg_A 380 ASAFGKLRIMFPMII-SVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKEVDFFSIGTNDLTQ 458 (575)
T ss_dssp HTTSSCEEEEESSCC-CHHHHHHHHHHHHHHHHHHHHTTCCCCTTCEEEEEECSHHHHHTHHHHHTTCSEEEECHHHHHH
T ss_pred HHhcCCCEEEEeCCC-CHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHHhCCEEEECHHHHHH
Confidence 344588888887654 3455 4444444433 24 56788885433446677788889999885431
Q ss_pred -----------CCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCC--ChhcHHHHHHcCCcEEEEccc
Q 023494 198 -----------PGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGV--GPKNAYKVIEAGANALVAGSA 256 (281)
Q Consensus 198 -----------pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI--~~e~i~~~~~aGAD~~VvGSa 256 (281)
-|..+++|.|.++.-|+.+.+..... +.++.|=|.. +++.++.+...|.|.+.++..
T Consensus 459 y~la~dR~~~~l~~~~dp~~paVl~li~~vv~aa~~~--g~~vgvCGe~agdp~~~~~l~~lG~~~~S~~p~ 528 (575)
T 2hwg_A 459 YTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAE--GKWTGMCGELAGDERATLLLLGMGLDEFSMSAI 528 (575)
T ss_dssp HHHTCCTTCGGGGGGCCSSSHHHHHHHHHHHHHHHHT--TCEEEECSTTTTCTTTHHHHHHTTCCEEEECGG
T ss_pred HHhCcCCCccccccccCCCCHHHHHHHHHHHHHHHHh--CCeEEEeCCCCCCHHHHHHHHHCCCCEEEECcc
Confidence 12235778899988888887776554 4677773332 688999999999999998854
No 273
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=94.46 E-value=0.096 Score=44.89 Aligned_cols=48 Identities=19% Similarity=0.288 Sum_probs=37.9
Q ss_pred hHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEEcccccCC
Q 023494 208 SQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGA 260 (281)
Q Consensus 208 ~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf~a 260 (281)
..++.++++++.. ++++.+.|||+ ++.+.++.++|||.+.+|+..+..
T Consensus 64 ~~~~~i~~i~~~~-----~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~~~~~ 112 (253)
T 1h5y_A 64 TFIDSVKRVAEAV-----SIPVLVGGGVRSLEDATTLFRAGADKVSVNTAAVRN 112 (253)
T ss_dssp HHHHHHHHHHHHC-----SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHC
T ss_pred ccHHHHHHHHHhc-----CCCEEEECCCCCHHHHHHHHHcCCCEEEEChHHhhC
Confidence 4455666666543 47888999998 789999999999999999987743
No 274
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=94.29 E-value=2 Score=39.27 Aligned_cols=182 Identities=14% Similarity=0.204 Sum_probs=110.7
Q ss_pred ccCccCH---HHHHHHHHHcCCCeEEEEeeeCc--ccccccCCHHHHHHcCc-CCCCCeeEEEEecChhhHHHHHHHcCC
Q 023494 66 SANFAKL---GEQVKAVELAGCDWIHVDVMDGR--FVPNITIGPLVVDALRP-VTDLPLDVHLMIVEPEQRVPDFIKAGA 139 (281)
Q Consensus 66 a~D~~~l---~~~l~~l~~~G~d~iHiDImDG~--fvpn~~~G~~~I~~ir~-~t~~~idaHLmv~dp~~~i~~~~~aGA 139 (281)
+.|..++ .-.++.+++.+...| +-+-.|. |.+ ..+-..+++...+ ..+.|+-+||==..-...+..++++|.
T Consensus 21 AfNv~n~e~~~avi~AAee~~sPvI-lq~s~g~~~y~g-~~~~~~~v~~aa~~~~~VPValHLDHg~~~e~~~~ai~~GF 98 (307)
T 3n9r_A 21 AFNFVNFEMLNAIFEAGNEENSPLF-IQASEGAIKYMG-IDMAVGMVKIMCERYPHIPVALHLDHGTTFESCEKAVKAGF 98 (307)
T ss_dssp EEECSSHHHHHHHHHHHHHHTCCEE-EEEEHHHHHHHC-HHHHHHHHHHHHHHSTTSCEEEEEEEECSHHHHHHHHHHTC
T ss_pred EEeeCCHHHHHHHHHHHHHhCCCEE-EEcChhhhhhCC-HHHHHHHHHHHHHhcCCCcEEEECCCCCCHHHHHHHHHhCC
Confidence 3444444 345667777777765 4444442 211 1111223333333 367999999966544457888999998
Q ss_pred CEEEEcccccc----cccHHHHHHHHHHcCCcEEEEEC----------------CCCCHHHHHHhhc--cCCEEEE--Ee
Q 023494 140 DIVSVHCEQSS----TIHLHRTLNQIKDLGAKAGVVLN----------------PATSLSAIECVLD--VVDLVLI--MS 195 (281)
Q Consensus 140 d~Itvh~Ea~~----~~~i~~~l~~ik~~G~k~Glai~----------------p~t~ie~~~~~l~--~vD~Ilv--ms 195 (281)
+.|-+=.-..+ ...-+++++.+++.|+-+-.-|. .-|..++..++.+ .+|.+.+ .+
T Consensus 99 tSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaELG~igG~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt 178 (307)
T 3n9r_A 99 TSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGIEDNISVDEKDAVLVNPKEAEQFVKESQVDYLAPAIGT 178 (307)
T ss_dssp SEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCC----------CCSCCHHHHHHHHHHHCCSEEEECSSC
T ss_pred CcEEEECCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcccccccccCCCHHHHHHHHHHHCCCEEEEecCC
Confidence 77766543222 12245777888888876532211 1267777777765 4898764 33
Q ss_pred ecCCC-C---CCccchhHHHHHHHHHHHhhhcCCCCeEEEec-----------------------CCChhcHHHHHHcCC
Q 023494 196 VNPGF-G---GQSFIESQVKKISDLRRMCLEKGVNPWIEVDG-----------------------GVGPKNAYKVIEAGA 248 (281)
Q Consensus 196 V~pG~-~---GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDG-----------------------GI~~e~i~~~~~aGA 248 (281)
+| |. . ..+.. +++|++++++. ++++..=| |+..+.++++++.|+
T Consensus 179 ~H-G~Yk~~~~p~Ld---~~~L~~I~~~~-----~~PLVlHGgS~vp~~~~~~~~~~gg~~~~~~G~p~e~i~~ai~~GV 249 (307)
T 3n9r_A 179 SH-GAFKFKGEPKLD---FERLQEVKRLT-----NIPLVLHGASAIPDNVRKSYLDAGGDLKGSKGVPFEFLQESVKGGI 249 (307)
T ss_dssp CS-SSBCCSSSCCCC---HHHHHHHHHHH-----CSCEEESSCCCCCHHHHHHHHHTTCCCTTCBCCCHHHHHHHHHTTE
T ss_pred cc-cccCCCCCCccC---HHHHHHHHhcC-----CCCeEEeCCCCcchHHHHHHHHhcCccCCCCCCCHHHHHHHHHcCc
Confidence 44 22 1 12333 45555555442 36788888 788999999999999
Q ss_pred cEEEEccccc
Q 023494 249 NALVAGSAVF 258 (281)
Q Consensus 249 D~~VvGSaIf 258 (281)
.-+=+++.+.
T Consensus 250 ~KiNi~Tdl~ 259 (307)
T 3n9r_A 250 NKVNTDTDLR 259 (307)
T ss_dssp EEEEECHHHH
T ss_pred eEEEechHHH
Confidence 9999998764
No 275
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=94.26 E-value=0.53 Score=40.71 Aligned_cols=111 Identities=17% Similarity=0.248 Sum_probs=66.9
Q ss_pred HHHHHHcCCCEEEEccccc-----ccccHHHHHHHHHHcCCcEEEEE---CCCCCHHHHHHhhc-----cCCEEEEEeec
Q 023494 131 VPDFIKAGADIVSVHCEQS-----STIHLHRTLNQIKDLGAKAGVVL---NPATSLSAIECVLD-----VVDLVLIMSVN 197 (281)
Q Consensus 131 i~~~~~aGAd~Itvh~Ea~-----~~~~i~~~l~~ik~~G~k~Glai---~p~t~ie~~~~~l~-----~vD~IlvmsV~ 197 (281)
.+.+.+.|||.|-++.... ..+...+.++.+++....+.+-+ .+....+.+.+... .+|+|- +.
T Consensus 76 ~~~A~~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~---ts 152 (225)
T 1mzh_A 76 AVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETPSAVHKVIVETPYLNEEEIKKAVEICIEAGADFIK---TS 152 (225)
T ss_dssp HHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCTTSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEE---CC
T ss_pred HHHHHHcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhcCceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEE---EC
Confidence 3467789999999765421 01224455777776532333433 34434333333322 389992 23
Q ss_pred CCCC-CCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEE
Q 023494 198 PGFG-GQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANAL 251 (281)
Q Consensus 198 pG~~-GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~ 251 (281)
.|+. |. .+++-++++++... .+++|-+.|||+ .+.+.+++++|||.+
T Consensus 153 tg~~~gg----a~~~~i~~v~~~v~---~~ipVia~GGI~t~~da~~~l~aGA~~i 201 (225)
T 1mzh_A 153 TGFAPRG----TTLEEVRLIKSSAK---GRIKVKASGGIRDLETAISMIEAGADRI 201 (225)
T ss_dssp CSCSSSC----CCHHHHHHHHHHHT---TSSEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred CCCCCCC----CCHHHHHHHHHHhC---CCCcEEEECCCCCHHHHHHHHHhCchHH
Confidence 3552 21 24556666666543 247999999998 889999999999953
No 276
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=94.20 E-value=0.33 Score=45.77 Aligned_cols=169 Identities=12% Similarity=0.159 Sum_probs=100.0
Q ss_pred CccCHHHHHHHHHHcCCCeEEEEeeeCcccccc------cCCHHHHHHcCcC---CCCCeeEEEEecChhhHHHHHHHcC
Q 023494 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNI------TIGPLVVDALRPV---TDLPLDVHLMIVEPEQRVPDFIKAG 138 (281)
Q Consensus 68 D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~------~~G~~~I~~ir~~---t~~~idaHLmv~dp~~~i~~~~~aG 138 (281)
|.....+.++.+.++|++.+-.. .|-|.. .+|.+..+.|+++ .++++... +.||. -++.+.+.
T Consensus 154 s~e~a~~~a~~~k~aGa~~vk~q----~fkprts~~~f~gl~~egl~~L~~~~~~~Gl~~~te--~~d~~-~~~~l~~~- 225 (385)
T 3nvt_A 154 SYEQVAAVAESIKAKGLKLIRGG----AFKPRTSPYDFQGLGLEGLKILKRVSDEYGLGVISE--IVTPA-DIEVALDY- 225 (385)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECB----SSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEE--CCSGG-GHHHHTTT-
T ss_pred CHHHHHHHHHHHHHcCCCeEEcc----cccCCCChHhhcCCCHHHHHHHHHHHHHcCCEEEEe--cCCHH-HHHHHHhh-
Confidence 44445566677888999977553 444321 3556666666554 56676663 34443 34555666
Q ss_pred CCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhcc------CCEEEEEe-e--cCCCCCCccchhH
Q 023494 139 ADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV------VDLVLIMS-V--NPGFGGQSFIESQ 209 (281)
Q Consensus 139 Ad~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~------vD~Ilvms-V--~pG~~GQ~f~~~~ 209 (281)
+|++-+.... ..+ ..+++++-+.|+-+++.......++++...++. -+++++.+ + +|.+. ...--
T Consensus 226 vd~lkIgs~~--~~n-~~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~---~~~ld 299 (385)
T 3nvt_A 226 VDVIQIGARN--MQN-FELLKAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKAT---RNTLD 299 (385)
T ss_dssp CSEEEECGGG--TTC-HHHHHHHHTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSS---SSBCC
T ss_pred CCEEEECccc--ccC-HHHHHHHHccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCC---ccccC
Confidence 9999999774 233 468888889999999998874455444333221 35666554 2 23221 11112
Q ss_pred HHHHHHHHHHhhhcCCCCeEEEec--CCC-h----hcHHHHHHcCCcEEEEcc
Q 023494 210 VKKISDLRRMCLEKGVNPWIEVDG--GVG-P----KNAYKVIEAGANALVAGS 255 (281)
Q Consensus 210 l~kI~~lr~l~~~~~~~~~I~VDG--GI~-~----e~i~~~~~aGAD~~VvGS 255 (281)
+.-|..+++.. +++|.+|- |++ . ......+.+|||++++=.
T Consensus 300 l~~i~~lk~~~-----~lpV~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~ 347 (385)
T 3nvt_A 300 ISAVPILKKET-----HLPVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEV 347 (385)
T ss_dssp TTHHHHHHHHB-----SSCEEEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEB
T ss_pred HHHHHHHHHhc-----CCCEEEcCCCCCCccchHHHHHHHHHHhCCCEEEEEe
Confidence 33455555543 46788882 222 1 233457889999998876
No 277
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=94.09 E-value=0.67 Score=43.27 Aligned_cols=113 Identities=23% Similarity=0.272 Sum_probs=69.5
Q ss_pred HHHHHHHcCCCEEEEcccccccccHHHHHHHHHHcC-CcEEEEECCC-CCHHHHHHhhc-cCCEEEEEeecCCCCCCccc
Q 023494 130 RVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLG-AKAGVVLNPA-TSLSAIECVLD-VVDLVLIMSVNPGFGGQSFI 206 (281)
Q Consensus 130 ~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G-~k~Glai~p~-t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f~ 206 (281)
+...+.++|. .-.+|... +.+...+.++.+|+.+ ..+++.+... ...+.++.+++ .+|+|.+-+. . | ..
T Consensus 62 lA~avA~aGG-lg~i~~~~-s~e~~~~~i~~vk~~~~l~vga~vg~~~~~~~~~~~lieaGvd~I~idta-~---G--~~ 133 (366)
T 4fo4_A 62 LAIALAQEGG-IGFIHKNM-SIEQQAAQVHQVKISGGLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSS-H---G--HS 133 (366)
T ss_dssp HHHHHHHTTC-EEEECSSS-CHHHHHHHHHHHHTTTSCCCEEECCSCTTCHHHHHHHHHTTCSEEEEECS-C---T--TS
T ss_pred HHHHHHHcCC-ceEeecCC-CHHHHHHHHHHHHhcCceeEEEEeccChhHHHHHHHHHhCCCCEEEEeCC-C---C--CC
Confidence 4444566664 33445433 3455667777777754 4566665432 23456666655 4898765321 1 2 22
Q ss_pred hhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEc
Q 023494 207 ESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAG 254 (281)
Q Consensus 207 ~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvG 254 (281)
+..++.|+++++..+ +.++.+....+.+.+..+.++|||.+++|
T Consensus 134 ~~~~~~I~~ik~~~p----~v~Vi~G~v~t~e~A~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 134 EGVLQRIRETRAAYP----HLEIIGGNVATAEGARALIEAGVSAVKVG 177 (366)
T ss_dssp HHHHHHHHHHHHHCT----TCEEEEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHHHhcC----CCceEeeeeCCHHHHHHHHHcCCCEEEEe
Confidence 456677777777643 35554433567999999999999999995
No 278
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=94.01 E-value=0.089 Score=48.49 Aligned_cols=121 Identities=13% Similarity=0.145 Sum_probs=81.2
Q ss_pred HHHHcCCCEEEEccccccccc---HHHHHHHHHH----cC------CcEEEEECCCCCHHHHHHhhccCCEEEEEeecC-
Q 023494 133 DFIKAGADIVSVHCEQSSTIH---LHRTLNQIKD----LG------AKAGVVLNPATSLSAIECVLDVVDLVLIMSVNP- 198 (281)
Q Consensus 133 ~~~~aGAd~Itvh~Ea~~~~~---i~~~l~~ik~----~G------~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~p- 198 (281)
.+.+.|+..|.++.-. +.++ ..+.++.++. .| .++|+.+....-+..+.+++..+|.+.+.+-+-
T Consensus 130 ra~~~G~~~ImvPmV~-s~~E~~~a~~~v~~~~~~~r~~G~~~~~~~~vg~mIEtp~av~~~d~Ia~~vD~~siGtnDLt 208 (324)
T 2xz9_A 130 RASAYGNVQIMYPMIS-SVEEVRKANSILEEVKAELDREGVKYDKEIKVGIMVEIPSAAVTADILAKEVDFFSIGTNDLT 208 (324)
T ss_dssp HHGGGSCEEEEECSCC-CHHHHHHHHHHHHHHHHHHHHHTCCCCTTCEEEEEECSHHHHHTHHHHTTTCSEEEECHHHHH
T ss_pred HHHhCCCCEEEEcCCC-CHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHHhCcEEEECHHHHH
Confidence 3445699999888654 3555 4445544443 23 567888854444577788888899998754321
Q ss_pred ----C---------CCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCC--ChhcHHHHHHcCCcEEEEccc
Q 023494 199 ----G---------FGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGV--GPKNAYKVIEAGANALVAGSA 256 (281)
Q Consensus 199 ----G---------~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI--~~e~i~~~~~aGAD~~VvGSa 256 (281)
| ..++++.|..+.-|+++.+-.... +.++.|=|.+ +++.++.+++.|.|.+.++..
T Consensus 209 q~~lg~dR~~~~~~~~~~~~~p~v~~ai~~vv~aar~a--G~~vgvcge~~~dp~~~~~l~~lG~~~~si~p~ 279 (324)
T 2xz9_A 209 QYTLAVDRMNEHVKEYYQPFHPAILRLVKMVIDAAHKE--GKFAAMCGEMAGDPLAAVILLGLGLDEFSMSAT 279 (324)
T ss_dssp HHHTTCCTTCGGGGGGCCTTCHHHHHHHHHHHHHHHHT--TCEEEECSGGGGCHHHHHHHHHHTCCEEEECGG
T ss_pred HHHhCCCCCcccccccCCCCCHHHHHHHHHHHHHHHHH--CCceeecCccCCCHHHHHHHHHCCCCEEEEChh
Confidence 1 124677888888888887776655 3566664443 677888999999999998854
No 279
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=93.97 E-value=0.72 Score=49.30 Aligned_cols=171 Identities=13% Similarity=0.109 Sum_probs=101.9
Q ss_pred CHHHHHHHHHHc--CCCeEEEE---eeeCcccccccCC-HHHHHHcCcC-CCCCeeEEEEecC-------h----hhHHH
Q 023494 71 KLGEQVKAVELA--GCDWIHVD---VMDGRFVPNITIG-PLVVDALRPV-TDLPLDVHLMIVE-------P----EQRVP 132 (281)
Q Consensus 71 ~l~~~l~~l~~~--G~d~iHiD---ImDG~fvpn~~~G-~~~I~~ir~~-t~~~idaHLmv~d-------p----~~~i~ 132 (281)
+..+.++.|.+. |...|+.- ..|.. .|.+... .+.++.|++. ++.++.+.+--.| | .++++
T Consensus 556 ~kl~ia~~L~~~~~G~~~lE~~Gga~~e~~-~~~~~e~~~e~l~~l~~~~~~~~~~~l~R~~n~vgy~~~pd~v~~~~v~ 634 (1150)
T 3hbl_A 556 DMINIASKTADVFKDGFSLEMWGGATFDVA-YNFLKENPWERLERLRKAIPNVLFQMLLRASNAVGYKNYPDNVIHKFVQ 634 (1150)
T ss_dssp HHHHHHHHHHHHTTTCSEEEEEETTHHHHH-HHTSCCCHHHHHHHHHHHCCSSEEEEEEETTTBTCSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCcEEeecCCceEEec-ccccCCCHHHHHHHHHHhCCCCeEEEEeccccccccccCCchhHHHHHH
Confidence 333444455555 66665542 12211 1223222 4567777764 5666655442211 2 24688
Q ss_pred HHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCC-----------CCHHHHHHhhc-----cCCEEEEEee
Q 023494 133 DFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPA-----------TSLSAIECVLD-----VVDLVLIMSV 196 (281)
Q Consensus 133 ~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~-----------t~ie~~~~~l~-----~vD~IlvmsV 196 (281)
.+.++|+|.+.+-.-..........++.+++.|..+...+++. +..+.+.++++ .+|.|.+-
T Consensus 635 ~a~~~Gvd~irif~~~sd~~~~~~~~~~~~e~g~~~~~~i~~~~~~~~pe~~~~~~~~~~~~~a~~~~~~Ga~~i~l~-- 712 (1150)
T 3hbl_A 635 ESAKAGIDVFRIFDSLNWVDQMKVANEAVQEAGKISEGTICYTGDILNPERSNIYTLEYYVKLAKELEREGFHILAIK-- 712 (1150)
T ss_dssp HHHHTTCCEEEEECTTCCGGGGHHHHHHHHHTTCEEEEEEECCSCTTCTTTCSSSSHHHHHHHHHHHHHTTCSEEEEE--
T ss_pred HHHhCCcCEEEEEeeCCHHHHHHHHHHHHHHHhhheeEEEeecccccChhhcCCCCHHHHHHHHHHHHHcCCCeeeEc--
Confidence 8899999998776543334567788889999998887776655 33344444433 26776653
Q ss_pred cCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEE----ecCCChhcHHHHHHcCCcEE
Q 023494 197 NPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEV----DGGVGPKNAYKVIEAGANAL 251 (281)
Q Consensus 197 ~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~V----DGGI~~e~i~~~~~aGAD~~ 251 (281)
-..|-.....+.+.++.+++.+ +++|.+ |-|....|.-..+++|||.+
T Consensus 713 --Dt~G~~~P~~~~~lv~~l~~~~-----~~~i~~H~Hnt~G~a~An~laA~~aGa~~v 764 (1150)
T 3hbl_A 713 --DMAGLLKPKAAYELIGELKSAV-----DLPIHLHTHDTSGNGLLTYKQAIDAGVDII 764 (1150)
T ss_dssp --ETTCCCCHHHHHHHHHHHHHHC-----CSCEEEEECBTTSCHHHHHHHHHHTTCSEE
T ss_pred --CccCCCCHHHHHHHHHHHHHhc-----CCeEEEEeCCCCcHHHHHHHHHHHhCCCEE
Confidence 2223222234455666666654 356766 78888889999999999975
No 280
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=93.87 E-value=0.69 Score=42.59 Aligned_cols=190 Identities=15% Similarity=0.147 Sum_probs=114.5
Q ss_pred EEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCc--ccccccCCHHHHHHcCcC-CCCCeeEEEEecChhhHHHHHHHcC
Q 023494 62 PSILSANFAKLGEQVKAVELAGCDWIHVDVMDGR--FVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAG 138 (281)
Q Consensus 62 pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~--fvpn~~~G~~~I~~ir~~-t~~~idaHLmv~dp~~~i~~~~~aG 138 (281)
|..=+-++..+.-.++.+++.+...| +-+-.|. |.. ..+-..+++...+. .+.|+-+||==......+..++++|
T Consensus 21 ~AfNv~n~e~~~Ail~AAee~~sPvI-lq~s~g~~~y~g-~~~~~~~v~~aa~~~~~VPValHlDHg~~~e~i~~ai~~G 98 (323)
T 2isw_A 21 GAFNVNNMEQIQGIMKAVVQLKSPVI-LQCSRGALKYSD-MIYLKKLCEAALEKHPDIPICIHLDHGDTLESVKMAIDLG 98 (323)
T ss_dssp EEEECCSHHHHHHHHHHHHHTTCCEE-EEEEHHHHHHTT-THHHHHHHHHHHHHCTTSCEEEEEEEECSHHHHHHHHHTT
T ss_pred EEEeeCCHHHHHHHHHHHHHhCCCEE-EECChhHHHhCC-HHHHHHHHHHHHHhcCCCcEEEECCCCCCHHHHHHHHHcC
Confidence 33333344444456677778877765 5554442 221 11111233333333 6799999997655556788999999
Q ss_pred CCEEEEccccccc----ccHHHHHHHHHHcCCcEEEEE-----------C--CCCCHHHHHHhhc--cCCEEEE--Eeec
Q 023494 139 ADIVSVHCEQSST----IHLHRTLNQIKDLGAKAGVVL-----------N--PATSLSAIECVLD--VVDLVLI--MSVN 197 (281)
Q Consensus 139 Ad~Itvh~Ea~~~----~~i~~~l~~ik~~G~k~Glai-----------~--p~t~ie~~~~~l~--~vD~Ilv--msV~ 197 (281)
.+.|-+=.-..+. ..-+++++.+++.|+-+-.-| + .-|..++..++.+ .+|.+.+ .++|
T Consensus 99 FtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~v~~~~~yTdPeea~~Fv~~TgvD~LAvaiGt~H 178 (323)
T 2isw_A 99 FSSVMIDASHHPFDENVRITKEVVAYAHARSVSVEAELGTLGGIEEDVQNTVQLTEPQDAKKFVELTGVDALAVAIGTSH 178 (323)
T ss_dssp CSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESCC----------CCCCCHHHHHHHHHHHCCSEEEECSSCCS
T ss_pred CCeEEecCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeCCccCCccCcccccccCCHHHHHHHHHHHCCCEEEEecCccc
Confidence 8877665433221 124567778888886651111 1 1277777888775 4897654 2333
Q ss_pred CCCC--CCccchhHHHHHHHHHHHhhhcCCCCeEEEec-----------------------CCChhcHHHHHHcCCcEEE
Q 023494 198 PGFG--GQSFIESQVKKISDLRRMCLEKGVNPWIEVDG-----------------------GVGPKNAYKVIEAGANALV 252 (281)
Q Consensus 198 pG~~--GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDG-----------------------GI~~e~i~~~~~aGAD~~V 252 (281)
--+. |.+-..-.+++|+++++.+ ++++..=| |+..+.++++++.|+--+=
T Consensus 179 G~Yk~~~~p~~~L~~~~L~~I~~~~-----~vpLVlHGgSsvp~~~~~~~~~~gg~~~~~~Gvp~e~i~~ai~~GV~KiN 253 (323)
T 2isw_A 179 GAYKFKSESDIRLAIDRVKTISDLT-----GIPLVMHGSSSVPKDVKDMINKYGGKMPDAVGVPIESIVHAIGEGVCKIN 253 (323)
T ss_dssp SSBCCCC----CCCCHHHHHHHHHH-----CSCEEECSCCCCCHHHHHHHHHTTCCCTTCBCCCHHHHHHHHHTTEEEEE
T ss_pred cccCCCCCcccccCHHHHHHHHHHh-----CCCeEEECCCCCCHHHHHHHHHhccccccCCCCCHHHHHHHHHCCCeEEE
Confidence 1111 2110001245666666665 37898999 8899999999999999999
Q ss_pred Eccccc
Q 023494 253 AGSAVF 258 (281)
Q Consensus 253 vGSaIf 258 (281)
+++.+.
T Consensus 254 i~Tdl~ 259 (323)
T 2isw_A 254 VDSDSR 259 (323)
T ss_dssp ECHHHH
T ss_pred EChHHH
Confidence 998763
No 281
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=93.85 E-value=0.4 Score=41.21 Aligned_cols=131 Identities=9% Similarity=-0.071 Sum_probs=76.7
Q ss_pred ceEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCe-eEEEE--ecCh-------
Q 023494 58 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL-DVHLM--IVEP------- 127 (281)
Q Consensus 58 ~~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~i-daHLm--v~dp------- 127 (281)
++|+-+.++..-..+++.++.+.+.|.+.+++..-..+.-+.-....+.++++-+..++.+ .+|.- .++|
T Consensus 7 m~lg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~ 86 (272)
T 2q02_A 7 TRFCINRKIAPGLSIEAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTINAVYPFNQLTEEVVKK 86 (272)
T ss_dssp GGEEEEGGGCTTSCHHHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEEEETTTTSCCHHHHHH
T ss_pred hhhhhcccccCCCCHHHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEEechhhhccCCcHHHHHHH
Confidence 4677777776556899999999999999998853111101101233444444333356655 55542 1222
Q ss_pred -hhHHHHHHHcCCCEEEEcccccc--------cccHHHHHHHHHHcCCcEEEEECC--C---CCHHHHHHhhccC
Q 023494 128 -EQRVPDFIKAGADIVSVHCEQSS--------TIHLHRTLNQIKDLGAKAGVVLNP--A---TSLSAIECVLDVV 188 (281)
Q Consensus 128 -~~~i~~~~~aGAd~Itvh~Ea~~--------~~~i~~~l~~ik~~G~k~Glai~p--~---t~ie~~~~~l~~v 188 (281)
.+.++.+.+.|++.|.+|.-... .+.+.++.+.++++|+++++--.+ . ...+.+..+++.+
T Consensus 87 ~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~~~~~~~~~~~~~~~~l~~~v 161 (272)
T 2q02_A 87 TEGLLRDAQGVGARALVLCPLNDGTIVPPEVTVEAIKRLSDLFARYDIQGLVEPLGFRVSSLRSAVWAQQLIREA 161 (272)
T ss_dssp HHHHHHHHHHHTCSEEEECCCCSSBCCCHHHHHHHHHHHHHHHHTTTCEEEECCCCSTTCSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEccCCCchhHHHHHHHHHHHHHHHHHHHcCCEEEEEecCCCcccccCHHHHHHHHHHh
Confidence 23456677889999999854210 233456666778889888775432 1 2345555666554
No 282
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=93.72 E-value=2.5 Score=38.15 Aligned_cols=181 Identities=15% Similarity=0.171 Sum_probs=113.0
Q ss_pred CccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHH----HHHHcCc--CCCCCeeEEEEecChhhHHHHHHHcCCCE
Q 023494 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPL----VVDALRP--VTDLPLDVHLMIVEPEQRVPDFIKAGADI 141 (281)
Q Consensus 68 D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~----~I~~ir~--~t~~~idaHLmv~dp~~~i~~~~~aGAd~ 141 (281)
|+..+.-.++.+++.+...| +-+-.|.. . +..|.. .++.+.+ ..+.|+-+||==..-...+..++++|.+.
T Consensus 30 n~e~~~avi~AAee~~sPvI-lq~s~~~~-~-~~~g~~~~~~~v~~~A~~~~~~VPValHlDHg~~~e~i~~ai~~GFtS 106 (288)
T 3q94_A 30 NLEWTQAILAAAEEEKSPVI-LGVSEGAA-R-HMTGFKTVVAMVKALIEEMNITVPVAIHLDHGSSFEKCKEAIDAGFTS 106 (288)
T ss_dssp SHHHHHHHHHHHHHTTCCEE-EEEEHHHH-H-HTSCHHHHHHHHHHHHHHTTCCSCEEEEEEEECSHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHHHHHHhCCCEE-EECChhhh-h-hcCCHHHHHHHHHHHHHhcCCCCcEEEECCCCCCHHHHHHHHHcCCCe
Confidence 33344455677788887765 54444421 0 111333 3444444 46799999996654455788899999888
Q ss_pred EEEccccccc----ccHHHHHHHHHHcCCcEEEEEC--------------CCCCHHHHHHhhc--cCCEEEE--EeecCC
Q 023494 142 VSVHCEQSST----IHLHRTLNQIKDLGAKAGVVLN--------------PATSLSAIECVLD--VVDLVLI--MSVNPG 199 (281)
Q Consensus 142 Itvh~Ea~~~----~~i~~~l~~ik~~G~k~Glai~--------------p~t~ie~~~~~l~--~vD~Ilv--msV~pG 199 (281)
|-+=.-..+. ..-+++++.+++.|+-+-.-|. .-|..++..++.+ .+|.+.+ .++|--
T Consensus 107 VMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~Ed~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~ 186 (288)
T 3q94_A 107 VMIDASHHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIAEGVIYADPAECKHLVEATGIDCLAPALGSVHGP 186 (288)
T ss_dssp EEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESBCBCSCSSCGGGGCBCCCHHHHHHHHHHHCCSEEEECSSCBSSC
T ss_pred EEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcCCccccCCCHHHHHHHHHHHCCCEEEEEcCcccCC
Confidence 7765433221 2245777888888876533221 2377788888875 4898765 344411
Q ss_pred CCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecC--CChhcHHHHHHcCCcEEEEccccc
Q 023494 200 FGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGG--VGPKNAYKVIEAGANALVAGSAVF 258 (281)
Q Consensus 200 ~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGG--I~~e~i~~~~~aGAD~~VvGSaIf 258 (281)
+.|.+ .-.+++|+++++.+ ++++..=|| +..+.++++++.|+--+=+++.+.
T Consensus 187 Y~~~p--~Ld~~~L~~I~~~v-----~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~Tdl~ 240 (288)
T 3q94_A 187 YKGEP--NLGFAEMEQVRDFT-----GVPLVLHGGTGIPTADIEKAISLGTSKINVNTENQ 240 (288)
T ss_dssp CSSSC--CCCHHHHHHHHHHH-----CSCEEECCCTTCCHHHHHHHHHTTEEEEEECHHHH
T ss_pred cCCCC--ccCHHHHHHHHHhc-----CCCEEEeCCCCCCHHHHHHHHHcCCeEEEEChHHH
Confidence 22221 12256677777765 367877664 558899999999999999998764
No 283
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=93.70 E-value=0.94 Score=41.21 Aligned_cols=102 Identities=16% Similarity=0.176 Sum_probs=54.7
Q ss_pred ccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcC---cCCCCCeeEEEEecChhhHHHHHHH--cCCC
Q 023494 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALR---PVTDLPLDVHLMIVEPEQRVPDFIK--AGAD 140 (281)
Q Consensus 66 a~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir---~~t~~~idaHLmv~dp~~~i~~~~~--aGAd 140 (281)
..|+....+..+.+.+.|+|+|-|-. +...++.-..=.+++..|+ +.++.|+-+| +.+|. .++.+.+ +|++
T Consensus 33 ~~~~~~a~~~A~~~v~~GAdiIDIg~-g~~~v~~~eem~rvv~~i~~~~~~~~vpisID--T~~~~-V~eaaL~~~~Ga~ 108 (300)
T 3k13_A 33 EKKYDEALSIARQQVEDGALVIDVNM-DDGLLDARTEMTTFLNLIMSEPEIARVPVMID--SSKWE-VIEAGLKCLQGKS 108 (300)
T ss_dssp TTCHHHHHHHHHHHHHTTCSEEEEEC-CCTTSCHHHHHHHHHHHHHTCHHHHTSCEEEE--CSCHH-HHHHHHHHCSSCC
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECC-CCCCCCHHHHHHHHHHHHHHhhhcCCCeEEEe--CCCHH-HHHHHHHhcCCCC
Confidence 34444445555667788999874432 1111111011112233332 3345665542 34554 5666777 7999
Q ss_pred EEE-EcccccccccHHHHHHHHHHcCCcEEEEE
Q 023494 141 IVS-VHCEQSSTIHLHRTLNQIKDLGAKAGVVL 172 (281)
Q Consensus 141 ~It-vh~Ea~~~~~i~~~l~~ik~~G~k~Glai 172 (281)
+|- +..+.. .+.+.+.+..++++|..+.+.-
T Consensus 109 iINdIs~~~~-d~~~~~~~~l~a~~ga~vV~mh 140 (300)
T 3k13_A 109 IVNSISLKEG-EEVFLEHARIIKQYGAATVVMA 140 (300)
T ss_dssp EEEEECSTTC-HHHHHHHHHHHHHHTCEEEEES
T ss_pred EEEeCCcccC-ChhHHHHHHHHHHhCCeEEEEe
Confidence 773 344421 2345588999999998776653
No 284
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=93.69 E-value=0.38 Score=44.30 Aligned_cols=119 Identities=24% Similarity=0.227 Sum_probs=72.8
Q ss_pred HHHHHHHHcCCCeEEEEeeeCcc-----cc--cc---cCC----------HHHHHHcCcCCCCCeeEEEEec--------
Q 023494 74 EQVKAVELAGCDWIHVDVMDGRF-----VP--NI---TIG----------PLVVDALRPVTDLPLDVHLMIV-------- 125 (281)
Q Consensus 74 ~~l~~l~~~G~d~iHiDImDG~f-----vp--n~---~~G----------~~~I~~ir~~t~~~idaHLmv~-------- 125 (281)
++.+.+.++|.|.|+|-.--|-. .| |. .+| .++++++|+..+.|+-+-|=..
T Consensus 148 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~ 227 (340)
T 3gr7_A 148 NGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHPDGLT 227 (340)
T ss_dssp HHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTTSCC
T ss_pred HHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCC
Confidence 44456678999998876543211 12 21 344 6788899887778888866643
Q ss_pred --ChhhHHHHHHHcCCCEEEEccccc-------ccccHHHHHHHHHHc-CCcEEEEECCCCCHHHHHHhhcc--CCEEEE
Q 023494 126 --EPEQRVPDFIKAGADIVSVHCEQS-------STIHLHRTLNQIKDL-GAKAGVVLNPATSLSAIECVLDV--VDLVLI 193 (281)
Q Consensus 126 --dp~~~i~~~~~aGAd~Itvh~Ea~-------~~~~i~~~l~~ik~~-G~k~Glai~p~t~ie~~~~~l~~--vD~Ilv 193 (281)
++.++++.+.++|+|++++|.-.. ......+.++.+|+. ++.+ ++..-=+..+..++++.. +|.|.+
T Consensus 228 ~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPV-i~~GgI~s~e~a~~~L~~G~aD~V~i 306 (340)
T 3gr7_A 228 AKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPT-GAVGLITSGWQAEEILQNGRADLVFL 306 (340)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCE-EEESSCCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcE-EeeCCCCCHHHHHHHHHCCCeeEEEe
Confidence 233456778899999999983110 011123566777764 4333 222222466777777663 899976
No 285
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=93.68 E-value=0.091 Score=49.81 Aligned_cols=51 Identities=29% Similarity=0.359 Sum_probs=41.1
Q ss_pred HHHHHHHHHHhhhcCC-CCeEEEecCCChhcHHHHHHcCCcEEEEcccccCC
Q 023494 210 VKKISDLRRMCLEKGV-NPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGA 260 (281)
Q Consensus 210 l~kI~~lr~l~~~~~~-~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a 260 (281)
.+-++++++.+++.+. +..|++-||||++++..+.+.|+|.|-+|+.+.++
T Consensus 253 ~~~v~~v~~~ld~~G~~~~~I~aSggl~~~~i~~l~~~GvD~~gvGt~l~~~ 304 (398)
T 2i1o_A 253 EALIREVRWELALRGRSDIKIMVSGGLDENTVKKLREAGAEAFGVGTSISSA 304 (398)
T ss_dssp HHHHHHHHHHHHHTTCTTSEEEEESSCCHHHHHHHHHTTCCEEEECHHHHTC
T ss_pred HHHHHHHHHHHHhCCCCceEEEEeCCCCHHHHHHHHHcCCCEEEeCcccCCC
Confidence 4445666666665442 47899999999999999999999999999987753
No 286
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=93.59 E-value=0.57 Score=41.57 Aligned_cols=130 Identities=20% Similarity=0.159 Sum_probs=85.0
Q ss_pred CCCCCceEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeC-cccccccCCHHHHHHcCcC-CCCCeeEEEEec-Ch--
Q 023494 53 FSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDG-RFVPNITIGPLVVDALRPV-TDLPLDVHLMIV-EP-- 127 (281)
Q Consensus 53 ~~~~~~~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG-~fvpn~~~G~~~I~~ir~~-t~~~idaHLmv~-dp-- 127 (281)
+-++..+|+.+|.+-+..++.++++.+.+.|+|.+++++ |- .-.++...=.+.+..+|+. .++|+.+-+-.. +.
T Consensus 15 ig~g~PkIcvpl~~~t~~e~l~~a~~~~~~~aD~vElR~-D~l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~ 93 (258)
T 4h3d_A 15 IGEGRPKICVPIIGKNKKDIIKEAKELKDACLDIIEWRV-DFFENVENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGE 93 (258)
T ss_dssp ETSSSCEEEEEECCSSHHHHHHHHHHHTTSSCSEEEEEG-GGCTTTTCHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCS
T ss_pred eCCCCCEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEee-ccccccCCHHHHHHHHHHHHHhcCCCCEEEEEechhhCCC
Confidence 445677899999998888888888888888999999974 31 0012222233456667765 467887655442 11
Q ss_pred -----hhHHH---HHHHcC-CCEEEEcccccccccHHHHHHHHHHcCCcEEEEEC--CCCC-HHHHHHh
Q 023494 128 -----EQRVP---DFIKAG-ADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLN--PATS-LSAIECV 184 (281)
Q Consensus 128 -----~~~i~---~~~~aG-Ad~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~--p~t~-ie~~~~~ 184 (281)
..|.+ .+.+.| +|+|=+-... +.+...++++.+++.|.++.++.+ ..|| .+.+...
T Consensus 94 ~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~-~~~~~~~l~~~a~~~~~kiI~S~Hdf~~TP~~~el~~~ 161 (258)
T 4h3d_A 94 KLISRDYYTTLNKEISNTGLVDLIDVELFM-GDEVIDEVVNFAHKKEVKVIISNHDFNKTPKKEEIVSR 161 (258)
T ss_dssp CCCCHHHHHHHHHHHHHTTCCSEEEEEGGG-CHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCchhhHHhhhc-cHHHHHHHHHHHHhCCCEEEEEEecCCCCCCHHHHHHH
Confidence 23443 345555 8999888764 234466778888999999998865 2355 3444443
No 287
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=93.54 E-value=0.27 Score=44.18 Aligned_cols=85 Identities=13% Similarity=0.054 Sum_probs=60.4
Q ss_pred ceEeEEEeccCccCHHHHHHHHHHcCCC-eEEEEeeeCcccccc----cCC------HHHHHHcCcCCCCCeeEEEEec-
Q 023494 58 IIVSPSILSANFAKLGEQVKAVELAGCD-WIHVDVMDGRFVPNI----TIG------PLVVDALRPVTDLPLDVHLMIV- 125 (281)
Q Consensus 58 ~~i~pSila~D~~~l~~~l~~l~~~G~d-~iHiDImDG~fvpn~----~~G------~~~I~~ir~~t~~~idaHLmv~- 125 (281)
..+..+|...+..++.+.++.+.+.|+| .|++.+- .|+. .+| .++++++|+.+++|+.+-+-..
T Consensus 94 ~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~----~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~~ 169 (311)
T 1jub_A 94 GPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLS----CPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPYF 169 (311)
T ss_dssp SCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESC----CCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCCC
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEecc----CCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECCCC
Confidence 3466788877888888999999999999 8888653 2332 233 4678888887778887744322
Q ss_pred Chhh---HHHHHHHcCCCEEEEcc
Q 023494 126 EPEQ---RVPDFIKAGADIVSVHC 146 (281)
Q Consensus 126 dp~~---~i~~~~~aGAd~Itvh~ 146 (281)
+... +.+.+.++|+|.|++|.
T Consensus 170 ~~~~~~~~a~~~~~~G~d~i~v~~ 193 (311)
T 1jub_A 170 DLVHFDIMAEILNQFPLTYVNSVN 193 (311)
T ss_dssp SHHHHHHHHHHHTTSCCCEEEECC
T ss_pred CHHHHHHHHHHHHHcCCcEEEecC
Confidence 2222 35667788999999985
No 288
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=93.42 E-value=0.63 Score=45.10 Aligned_cols=123 Identities=18% Similarity=0.104 Sum_probs=74.6
Q ss_pred CHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcC-CCCCeeEEEEecChhhHHHHHHHcCCCEEEEccccc
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQS 149 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~-t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~ 149 (281)
+..+.++.+.++|+|.+++|...|+. ..-.+.++++|+. ++.++.+ --+.++ +..+.+.++|||.|.+..-..
T Consensus 231 d~~~~a~~l~~aG~d~I~id~a~g~~----~~~~~~i~~ir~~~p~~~Vi~-g~v~t~-e~a~~l~~aGaD~I~Vg~g~G 304 (496)
T 4fxs_A 231 GNEERVKALVEAGVDVLLIDSSHGHS----EGVLQRIRETRAAYPHLEIIG-GNVATA-EGARALIEAGVSAVKVGIGPG 304 (496)
T ss_dssp CCHHHHHHHHHTTCSEEEEECSCTTS----HHHHHHHHHHHHHCTTCCEEE-EEECSH-HHHHHHHHHTCSEEEECSSCC
T ss_pred chHHHHHHHHhccCceEEeccccccc----hHHHHHHHHHHHHCCCceEEE-cccCcH-HHHHHHHHhCCCEEEECCCCC
Confidence 34566778888999999999887643 1234778888876 4677766 123443 367788999999999841100
Q ss_pred c-----------ccc---HHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCCEEEEEeecCC
Q 023494 150 S-----------TIH---LHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPG 199 (281)
Q Consensus 150 ~-----------~~~---i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG 199 (281)
+ ..+ +.++.+.+++.++.+..+=.-.++-+..+.+...+|.|++.+...|
T Consensus 305 s~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GAd~V~iGs~f~~ 368 (496)
T 4fxs_A 305 SICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAG 368 (496)
T ss_dssp TTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTT
T ss_pred cCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHHcCCCeEEecHHHhc
Confidence 0 111 3445555556676655432223444434444446999987654433
No 289
>1ct5_A Protein (yeast hypothetical protein, selenoMet); TIM barrel, pyridoxal-5'-phosphate, selenomethionine, structural genomics, PSI; HET: PLP; 2.00A {Saccharomyces cerevisiae} SCOP: c.1.6.2 PDB: 1b54_A*
Probab=93.42 E-value=2 Score=37.87 Aligned_cols=172 Identities=13% Similarity=0.123 Sum_probs=86.8
Q ss_pred HHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHc-CCCEEEEcccccccc
Q 023494 74 EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA-GADIVSVHCEQSSTI 152 (281)
Q Consensus 74 ~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~a-GAd~Itvh~Ea~~~~ 152 (281)
+.+..+.++|++++=+ ..+.++....+.+. + ++..|+.-.-+.+.++.+..+ ..+++ |.-. +.+
T Consensus 53 ~~i~~~~~aG~~~fgv--------a~vqEa~~~r~~~~---~-~l~~h~iG~lq~nk~~~~~~~~~~~l~--~sVd-s~~ 117 (256)
T 1ct5_A 53 SDIQILYDHGVREFGE--------NYVQELIEKAKLLP---D-DIKWHFIGGLQTNKCKDLAKVPNLYSV--ETID-SLK 117 (256)
T ss_dssp HHHHHHHHHTCCEEEE--------CCHHHHHHHHHHSC---T-TCEEEECSCCCGGGHHHHHHCTTEEEE--EEEC-SHH
T ss_pred HHHHHHHHcCCCEEEE--------EcHHHHHHHHHhcc---c-CeeEeecCCCCHHHHHHHhcccccCEE--EEEC-CHH
Confidence 4556688889997632 33344444444432 2 466666443333345555322 23332 3222 234
Q ss_pred cHHHHHHHHHHcCC---cE--EEEECCC--------CCHHHH----HHhh----ccCCEEEEEeec--CCCCCCccchhH
Q 023494 153 HLHRTLNQIKDLGA---KA--GVVLNPA--------TSLSAI----ECVL----DVVDLVLIMSVN--PGFGGQSFIESQ 209 (281)
Q Consensus 153 ~i~~~l~~ik~~G~---k~--Glai~p~--------t~ie~~----~~~l----~~vD~IlvmsV~--pG~~GQ~f~~~~ 209 (281)
...++-+.+++.|. .+ -|-+|.+ .+.+.+ +.+. +.+.+..+||.. |-..........
T Consensus 118 ~a~~l~~~a~~~~~~~~~l~V~lqVdtG~e~~R~G~~~~~e~~~l~~~i~~~~~~~L~l~Glmth~~~~~ad~~~~~~~~ 197 (256)
T 1ct5_A 118 KAKKLNESRAKFQPDCNPILCNVQINTSHEDQKSGLNNEAEIFEVIDFFLSEECKYIKLNGLMTIGSWNVSHEDSKENRD 197 (256)
T ss_dssp HHHHHHHHHHHHCTTSCCEEEEEEBCCSSSCCSSSBCCHHHHHHHHHHHHSTTCCSEEEEEEECCCCCC---------HH
T ss_pred HHHHHHHHHHHcCCCCCCceEEEEEECCCCCCCcCcCchHHHHHHHHHHHHccCCCeeEEEEEEECCcCCCCCHHHHHHH
Confidence 45555566667776 44 4445554 121222 2222 235567788775 322221123345
Q ss_pred HHHHHHHHHHhhhcCC-CCeEEEecCCChhcHHHHHHcCCcEEEEcccccCCCCH
Q 023494 210 VKKISDLRRMCLEKGV-NPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAKDY 263 (281)
Q Consensus 210 l~kI~~lr~l~~~~~~-~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a~dp 263 (281)
+++++++++.+.+ +. .+. .+-.|.+.+ .+..++.|+|.+=+|++||+..++
T Consensus 198 f~~~~~~~~~l~~-~~~~~~-~lS~Gms~d-~~~ai~~g~t~VR~G~~lfG~~~~ 249 (256)
T 1ct5_A 198 FATLVEWKKKIDA-KFGTSL-KLSMGMSAD-FREAIRQGTAEVRIGTDIFGARPP 249 (256)
T ss_dssp HHHHHHHHHHHHH-HHCCCC-EEECCCTTT-HHHHHHTTCSEEEESHHHHC----
T ss_pred HHHHHHHHHHHHh-cCCCCC-EEEecccHh-HHHHHHcCCCEEEecHHHhCCCcC
Confidence 6677666666543 21 122 347777653 566678999999999999986543
No 290
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=93.21 E-value=0.48 Score=51.64 Aligned_cols=128 Identities=19% Similarity=0.236 Sum_probs=79.0
Q ss_pred HHHHHH--HcCCCEEEEccccc--ccccHHHHHHHHHHc--CCcEEEEECCCCCH-HHHHHhhc-cCCEEEEEeecCCCC
Q 023494 130 RVPDFI--KAGADIVSVHCEQS--STIHLHRTLNQIKDL--GAKAGVVLNPATSL-SAIECVLD-VVDLVLIMSVNPGFG 201 (281)
Q Consensus 130 ~i~~~~--~aGAd~Itvh~Ea~--~~~~i~~~l~~ik~~--G~k~Glai~p~t~i-e~~~~~l~-~vD~IlvmsV~pG~~ 201 (281)
++..+. ..|.+.++-..... +.+++.+.++.+|+. ++.+++-+-+...+ .....+.+ .+|.|.+-..+.|.+
T Consensus 952 ~IA~~R~~~~Gv~lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~~AGAD~IvVsG~eGGTg 1031 (1479)
T 1ea0_A 952 MIARLRHSTPGVMLISPPPHHDIYSIEDLAQLIYDLKQINPDAKVTVKLVSRSGIGTIAAGVAKANADIILISGNSGGTG 1031 (1479)
T ss_dssp HHHHHHTCCTTCCEECCSSCTTCSSHHHHHHHHHHHHHHCTTCEEEEEEECCTTHHHHHHHHHHTTCSEEEEECTTCCCS
T ss_pred HHHHHcCCCCCCCccCCCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEEcCCCChHHHHHHHHHcCCcEEEEcCCCCCCC
Confidence 444443 34677765432210 123456788888887 67888866655443 33333333 489998754443432
Q ss_pred CCccch-------hHHHHHHHHHHHhhhcC--CCCeEEEecCCC-hhcHHHHHHcCCcEEEEccccc
Q 023494 202 GQSFIE-------SQVKKISDLRRMCLEKG--VNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVF 258 (281)
Q Consensus 202 GQ~f~~-------~~l~kI~~lr~l~~~~~--~~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf 258 (281)
+ .+.. -+..-|.++++.+...+ .+++|.+||||. ...+.+.+.+|||.+-+|++.+
T Consensus 1032 a-sp~~~~~~~G~Pt~~aL~ev~~al~~~glr~~VpVIAdGGIrtG~DVakALaLGAdaV~iGTafL 1097 (1479)
T 1ea0_A 1032 A-SPQTSIKFAGLPWEMGLSEVHQVLTLNRLRHRVRLRTDGGLKTGRDIVIAAMLGAEEFGIGTASL 1097 (1479)
T ss_dssp S-EETTHHHHSCCCHHHHHHHHHHHHHTTTCTTTSEEEEESSCCSHHHHHHHHHTTCSEEECCHHHH
T ss_pred C-CchhhhcCCchhHHHHHHHHHHHHHHcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeeEcHHHH
Confidence 2 2211 12345666666654433 258899999999 6788899999999999998863
No 291
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=93.13 E-value=0.98 Score=41.86 Aligned_cols=118 Identities=11% Similarity=0.087 Sum_probs=78.8
Q ss_pred cChhhHHH---HHHHcCCCEEEEcccccccccHHHHHHHHHHc-C-CcEEEEECCCCCHHHHHHhhcc-----CCEEEEE
Q 023494 125 VEPEQRVP---DFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL-G-AKAGVVLNPATSLSAIECVLDV-----VDLVLIM 194 (281)
Q Consensus 125 ~dp~~~i~---~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~-G-~k~Glai~p~t~ie~~~~~l~~-----vD~Ilvm 194 (281)
.+|+.+.+ .+.++|.+.+=+|.-. ......+.++++|+. | +.+.+..|.....+...++++. +++|-
T Consensus 146 ~~~e~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~avr~a~gd~~l~vD~n~~~~~~~a~~~~~~l~~~~i~~iE-- 222 (384)
T 2pgw_A 146 ETAEELARDAAVGHAQGERVFYLKVGR-GEKLDLEITAAVRGEIGDARLRLDANEGWSVHDAINMCRKLEKYDIEFIE-- 222 (384)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHHHTTSTTCEEEEECTTCCCHHHHHHHHHHHGGGCCSEEE--
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECcCC-CHHHHHHHHHHHHHHcCCcEEEEecCCCCCHHHHHHHHHHHHhcCCCEEe--
Confidence 57776654 4567899999998642 123345777888865 4 6667777777777655454432 45542
Q ss_pred eecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEEccccc
Q 023494 195 SVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVAGSAVF 258 (281)
Q Consensus 195 sV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~VvGSaIf 258 (281)
|++.+..++-++++++.. +++|..|+.+. ++.+.++++.| +|++.+.-.-.
T Consensus 223 --------qP~~~~~~~~~~~l~~~~-----~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~ 275 (384)
T 2pgw_A 223 --------QPTVSWSIPAMAHVREKV-----GIPIVADQAAFTLYDVYEICRQRAADMICIGPREI 275 (384)
T ss_dssp --------CCSCTTCHHHHHHHHHHC-----SSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHH
T ss_pred --------CCCChhhHHHHHHHHhhC-----CCCEEEeCCcCCHHHHHHHHHcCCCCEEEEcchhh
Confidence 445455566666666543 47999999996 78888888776 89998864433
No 292
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=93.01 E-value=0.64 Score=42.65 Aligned_cols=99 Identities=17% Similarity=0.229 Sum_probs=56.0
Q ss_pred CccCHHHHHHHHHHcCCCeEEEEeeeCccccccc-------C------CHHHHHHcCcCCCCCeeEEEEecChhhHHHHH
Q 023494 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNIT-------I------GPLVVDALRPVTDLPLDVHLMIVEPEQRVPDF 134 (281)
Q Consensus 68 D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~-------~------G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~ 134 (281)
|+...-+..+.+.+.|+|+| ||==-..-|.-. . =..+|+.|++.++.|+-+ =+.+|. .++.+
T Consensus 47 ~~~~al~~A~~~v~~GAdII--DIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISI--DT~~~~-Va~aA 121 (314)
T 3tr9_A 47 DLNSALRTAEKMVDEGADIL--DIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISV--DTSRPR-VMREA 121 (314)
T ss_dssp SHHHHHHHHHHHHHTTCSEE--EEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEE--ECSCHH-HHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEE--EECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEE--eCCCHH-HHHHH
Confidence 44444445556678899986 443111234211 0 113456666655555554 335554 56778
Q ss_pred HHcCCCEEEEc-ccccccccHHHHHHHHHHcCCcEEEEECCCC
Q 023494 135 IKAGADIVSVH-CEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT 176 (281)
Q Consensus 135 ~~aGAd~Itvh-~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t 176 (281)
.++||++|-=- .+. ..+.+..++++|..+.+.-+.++
T Consensus 122 l~aGa~iINDVsg~~-----~~~m~~v~a~~g~~vVlMh~~G~ 159 (314)
T 3tr9_A 122 VNTGADMINDQRALQ-----LDDALTTVSALKTPVCLMHFPSE 159 (314)
T ss_dssp HHHTCCEEEETTTTC-----STTHHHHHHHHTCCEEEECCCCT
T ss_pred HHcCCCEEEECCCCC-----chHHHHHHHHhCCeEEEECCCCC
Confidence 88999987432 221 22577888899988877654433
No 293
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=92.98 E-value=1.1 Score=40.24 Aligned_cols=142 Identities=13% Similarity=0.168 Sum_probs=82.7
Q ss_pred cCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEcccccccccH-HHHHHHHHHc-CCcEEEEECCCCCH
Q 023494 101 TIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHL-HRTLNQIKDL-GAKAGVVLNPATSL 178 (281)
Q Consensus 101 ~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~~~~~i-~~~l~~ik~~-G~k~Glai~p~t~i 178 (281)
+...+-|.-||..-+. -.-||.+....+.++|||+||+|.-. +..++ .+.+..+++. ..+.-+-.+|....
T Consensus 35 gVNIDhVAtLRnARg~------~~PDpv~aA~~ae~aGAdGITvHlRe-DrRHI~d~Dv~~L~~~i~t~lNlEma~t~em 107 (278)
T 3gk0_A 35 GVNIDHVATLRNARGT------AYPDPVRAALAAEDAGADAITLHLRE-DRRHIVDADVRTLRPRVKTRMNLECAVTPEM 107 (278)
T ss_dssp EEECHHHHHHHHHHSS------SCSCHHHHHHHHHHTTCSEEEEECCT-TCSSSCHHHHHHHHHHCSSCEEEEECSSHHH
T ss_pred EechHhhhhhhccCCC------CCCCHHHHHHHHHHcCCCEEEeccCC-CcccCCHHHHHHHHHHcCCCEEeecCCCHHH
Confidence 4445556666653111 11255556666789999999999763 23333 2444455543 56777777764322
Q ss_pred HHHHHhhc-cCCEEEEEeecCC---C-CCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEE
Q 023494 179 SAIECVLD-VVDLVLIMSVNPG---F-GGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVA 253 (281)
Q Consensus 179 e~~~~~l~-~vD~IlvmsV~pG---~-~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~Vv 253 (281)
+.-.++ .+|.|.+..-.+. . +|-.+ ..-.++|+.+.+.+.+.|..+-+=+| =.++.+....+.|||.+=+
T Consensus 108 --i~ial~~kP~~vtLVPEkreE~TTegGlDv-~~~~~~L~~~i~~L~~~GIrVSLFID--pd~~qI~aA~~~GAd~IEL 182 (278)
T 3gk0_A 108 --LDIACEIRPHDACLVPEKRSELTTEGGLDV-VGHFDAVRAACKQLADAGVRVSLFID--PDEAQIRAAHETGAPVIEL 182 (278)
T ss_dssp --HHHHHHHCCSEEEECCCSGGGBCSSSSBCT-TTTHHHHHHHHHHHHHTTCEEEEEEC--SCHHHHHHHHHHTCSEEEE
T ss_pred --HHHHHHcCCCEEEECCCCCCCcCCCcchhh-hccHHHHHHHHHHHHHCCCEEEEEeC--CCHHHHHHHHHhCcCEEEE
Confidence 322233 4789877432221 1 23222 23356677766666666544445566 3466899999999999988
Q ss_pred c
Q 023494 254 G 254 (281)
Q Consensus 254 G 254 (281)
=
T Consensus 183 h 183 (278)
T 3gk0_A 183 H 183 (278)
T ss_dssp C
T ss_pred e
Confidence 4
No 294
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=92.63 E-value=1 Score=38.84 Aligned_cols=130 Identities=14% Similarity=0.078 Sum_probs=78.2
Q ss_pred eEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcC---CCC-CeeEEEEe-----cChh-
Q 023494 59 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV---TDL-PLDVHLMI-----VEPE- 128 (281)
Q Consensus 59 ~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~---t~~-~idaHLmv-----~dp~- 128 (281)
+|..++.+.....+++.++.+.+.|.|.+++-..+.+......+....++++++. .++ .+.+|.-. .||.
T Consensus 3 klg~~~~~~~~~~~~~~~~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~h~~~~~~l~s~~~~ 82 (270)
T 3aam_A 3 RYGFHLSIAGKKGVAGAVEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREASGGLPAVIHASYLVNLGAEGEL 82 (270)
T ss_dssp EEEEBCCCCSTTHHHHHHHHHHHHTCSCEEEESSCTTCCSCCCCCHHHHHHHHHHHHHTTCCCEEEECCTTCCTTCSSTH
T ss_pred eeeeccccCCCccHHHHHHHHHHcCCCEEEEeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCceEEEecCcccCCCCCHHH
Confidence 5666666554446899999999999999988221111111122334455555442 455 66777421 1442
Q ss_pred ---------hHHHHHHHcCCCEEEEccccc----ccccHHHHHHHHH-HcCCcEEEEECCC------CCHHHHHHhhccC
Q 023494 129 ---------QRVPDFIKAGADIVSVHCEQS----STIHLHRTLNQIK-DLGAKAGVVLNPA------TSLSAIECVLDVV 188 (281)
Q Consensus 129 ---------~~i~~~~~aGAd~Itvh~Ea~----~~~~i~~~l~~ik-~~G~k~Glai~p~------t~ie~~~~~l~~v 188 (281)
+.++.+.+.|+..+.+|.-.. ..+.+.++.+.++ +.|+++++--.+. +..+.+..+++.+
T Consensus 83 r~~~~~~~~~~i~~a~~lGa~~vv~h~g~~~~~~~~~~l~~l~~~a~~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~~v 162 (270)
T 3aam_A 83 WEKSVASLADDLEKAALLGVEYVVVHPGSGRPERVKEGALKALRLAGVRSRPVLLVENTAGGGEKVGARFEELAWLVADT 162 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEECCCBSCHHHHHHHHHHHHHHHTCCSSSEEEEECCCCCTTBSCCSHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHhhcccCCCEEEEecCCCCCCccCCCHHHHHHHHHhC
Confidence 235556788999999996421 0123555666666 6788888865532 2567777777766
No 295
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=92.63 E-value=1.8 Score=35.36 Aligned_cols=84 Identities=12% Similarity=0.120 Sum_probs=48.4
Q ss_pred HHHHHcCCcEEEEECCCCCHHHHHHhhc--cCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCC-CCeEEEecCC
Q 023494 159 NQIKDLGAKAGVVLNPATSLSAIECVLD--VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGV-NPWIEVDGGV 235 (281)
Q Consensus 159 ~~ik~~G~k~Glai~p~t~ie~~~~~l~--~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~-~~~I~VDGGI 235 (281)
..++..|.++- .+....|.+.+.+.+. .+|+|.+-+... ..++.++++.+.+.+.+. +++|.|.|.+
T Consensus 40 ~~l~~~G~eVi-~lG~~~p~e~lv~aa~~~~~diV~lS~~~~---------~~~~~~~~~i~~L~~~g~~~i~v~vGG~~ 109 (161)
T 2yxb_A 40 RALRDAGFEVV-YTGLRQTPEQVAMAAVQEDVDVIGVSILNG---------AHLHLMKRLMAKLRELGADDIPVVLGGTI 109 (161)
T ss_dssp HHHHHTTCEEE-CCCSBCCHHHHHHHHHHTTCSEEEEEESSS---------CHHHHHHHHHHHHHHTTCTTSCEEEEECC
T ss_pred HHHHHCCCEEE-ECCCCCCHHHHHHHHHhcCCCEEEEEeech---------hhHHHHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 34556676654 2333456665555443 478777643321 122333333333333443 5788888888
Q ss_pred ChhcHHHHHHcCCcEEE
Q 023494 236 GPKNAYKVIEAGANALV 252 (281)
Q Consensus 236 ~~e~i~~~~~aGAD~~V 252 (281)
..+....+.+.|+|.+.
T Consensus 110 ~~~~~~~l~~~G~d~v~ 126 (161)
T 2yxb_A 110 PIPDLEPLRSLGIREIF 126 (161)
T ss_dssp CHHHHHHHHHTTCCEEE
T ss_pred chhcHHHHHHCCCcEEE
Confidence 77777788899999654
No 296
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=92.62 E-value=1 Score=41.42 Aligned_cols=119 Identities=21% Similarity=0.244 Sum_probs=71.6
Q ss_pred HHHHHHHHcCCCeEEEEeeeCccc-----cc--c---cCC----------HHHHHHcCcCC--CCCeeEEEEec------
Q 023494 74 EQVKAVELAGCDWIHVDVMDGRFV-----PN--I---TIG----------PLVVDALRPVT--DLPLDVHLMIV------ 125 (281)
Q Consensus 74 ~~l~~l~~~G~d~iHiDImDG~fv-----pn--~---~~G----------~~~I~~ir~~t--~~~idaHLmv~------ 125 (281)
++.+.+.++|.|.|+|..-.|-.+ |+ . .+| .++++++|+.. +.|+-+.|=..
T Consensus 156 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g 235 (349)
T 3hgj_A 156 EGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGG 235 (349)
T ss_dssp HHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTS
T ss_pred HHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCC
Confidence 444566789999988876554221 32 1 334 67888998864 56777766543
Q ss_pred -Ch---hhHHHHHHHcCCCEEEEccc-ccc-------cccHHHHHHHHHHc-CCcEEEEECCCCCHHHHHHhhcc--CCE
Q 023494 126 -EP---EQRVPDFIKAGADIVSVHCE-QSS-------TIHLHRTLNQIKDL-GAKAGVVLNPATSLSAIECVLDV--VDL 190 (281)
Q Consensus 126 -dp---~~~i~~~~~aGAd~Itvh~E-a~~-------~~~i~~~l~~ik~~-G~k~Glai~p~t~ie~~~~~l~~--vD~ 190 (281)
++ .++++.+.++|+|+++++.- ... .....+.++.+|+. ++ ..++..--+..+..++++.. +|.
T Consensus 236 ~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~i-PVi~~Ggi~t~e~a~~~l~~G~aD~ 314 (349)
T 3hgj_A 236 WSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGL-RTGAVGLITTPEQAETLLQAGSADL 314 (349)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCC-EEEECSSCCCHHHHHHHHHTTSCSE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCc-eEEEECCCCCHHHHHHHHHCCCceE
Confidence 22 23466778899999999941 000 11123566777764 33 22232222466777777664 899
Q ss_pred EEE
Q 023494 191 VLI 193 (281)
Q Consensus 191 Ilv 193 (281)
|.+
T Consensus 315 V~i 317 (349)
T 3hgj_A 315 VLL 317 (349)
T ss_dssp EEE
T ss_pred EEe
Confidence 976
No 297
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=92.57 E-value=1.2 Score=40.09 Aligned_cols=96 Identities=14% Similarity=0.123 Sum_probs=53.0
Q ss_pred CccCHHHHHHHHHHcCCCeEEEEeeeCccccc---c---cCC---HHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcC
Q 023494 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPN---I---TIG---PLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAG 138 (281)
Q Consensus 68 D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn---~---~~G---~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aG 138 (281)
|+....+..+.+.+.|+|+| ||-=-..-|. + ..- ..+++.+++. +.|+-+ =+.+|. .++.+.++|
T Consensus 27 ~~~~a~~~a~~~v~~GAdiI--DIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~-~~piSI--DT~~~~-va~aAl~aG 100 (280)
T 1eye_A 27 DLDDAVKHGLAMAAAGAGIV--DVGGESSRPGATRVDPAVETSRVIPVVKELAAQ-GITVSI--DTMRAD-VARAALQNG 100 (280)
T ss_dssp SHHHHHHHHHHHHHTTCSEE--EEECC--------------HHHHHHHHHHHHHT-TCCEEE--ECSCHH-HHHHHHHTT
T ss_pred CHHHHHHHHHHHHHCCCCEE--EECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC-CCEEEE--eCCCHH-HHHHHHHcC
Confidence 33344445566778899986 4431111132 1 111 2334445443 566555 345655 677888999
Q ss_pred CCEEE-EcccccccccHHHHHHHHHHcCCcEEEEEC
Q 023494 139 ADIVS-VHCEQSSTIHLHRTLNQIKDLGAKAGVVLN 173 (281)
Q Consensus 139 Ad~It-vh~Ea~~~~~i~~~l~~ik~~G~k~Glai~ 173 (281)
+++|- +..+.. . .+.++.++++|+.+.+.-+
T Consensus 101 a~iINdvsg~~~-d---~~m~~~~a~~~~~vVlmh~ 132 (280)
T 1eye_A 101 AQMVNDVSGGRA-D---PAMGPLLAEADVPWVLMHW 132 (280)
T ss_dssp CCEEEETTTTSS-C---TTHHHHHHHHTCCEEEECC
T ss_pred CCEEEECCCCCC-C---HHHHHHHHHhCCeEEEEcC
Confidence 99884 333321 1 2567788899998887654
No 298
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=92.48 E-value=0.46 Score=44.27 Aligned_cols=117 Identities=16% Similarity=0.120 Sum_probs=77.3
Q ss_pred ChhhHHH---HHHHcCCCEEEEcccccccccHHHHHHHHHHc---CCcEEEEECCCCCHHHHHHhhcc-----CCEEEEE
Q 023494 126 EPEQRVP---DFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL---GAKAGVVLNPATSLSAIECVLDV-----VDLVLIM 194 (281)
Q Consensus 126 dp~~~i~---~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~---G~k~Glai~p~t~ie~~~~~l~~-----vD~Ilvm 194 (281)
+|+.+.+ .+.+.|.+.+=+|.-..+.+...+.++++|+. ++.+.+..|.....+...++++. .+...+
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a~G~~~~l~vDan~~~~~~~a~~~~~~l~~~g~~i~~i- 223 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIKVGHRDFDRDLRRLELLKTCVPAGSKVMIDPNEAWTSKEALTKLVAIREAGHDLLWV- 223 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHTTSCTTCEEEEECTTCBCHHHHHHHHHHHHHTTCCCSEE-
T ss_pred CHHHHHHHHHHHHHhCCCEEEEccCCCCHHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCceEE-
Confidence 6666644 45678999999986421123345677788873 46677788877777655554432 222111
Q ss_pred eecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcC-CcEEEEc
Q 023494 195 SVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAG-ANALVAG 254 (281)
Q Consensus 195 sV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aG-AD~~VvG 254 (281)
.|++.+..++-.+++++... +++|..|+.++++.+..+++.| +|++.++
T Consensus 224 -------EqP~~~~~~~~~~~l~~~~~----~iPIa~dE~~~~~~~~~~i~~~~~d~v~ik 273 (389)
T 2oz8_A 224 -------EDPILRHDHDGLRTLRHAVT----WTQINSGEYLDLQGKRLLLEAHAADILNVH 273 (389)
T ss_dssp -------ESCBCTTCHHHHHHHHHHCC----SSEEEECTTCCHHHHHHHHHTTCCSEEEEC
T ss_pred -------eCCCCCcCHHHHHHHHhhCC----CCCEEeCCCCCHHHHHHHHHcCCCCEEEEC
Confidence 35665656666666665431 4799999999888888888877 8999997
No 299
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=92.43 E-value=0.87 Score=44.02 Aligned_cols=124 Identities=21% Similarity=0.131 Sum_probs=73.3
Q ss_pred cCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcC-CCCCeeEEEEecChhhHHHHHHHcCCCEEEEcccc
Q 023494 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQ 148 (281)
Q Consensus 70 ~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~-t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea 148 (281)
.+..+.++.+.++|+|.+++|...|+.. .-.+.++++|+. ++.++.+ --+.++ +..+.+.++|||.|.+....
T Consensus 228 ~~~~~~a~~l~~aG~d~I~id~a~g~~~----~~~~~v~~i~~~~p~~~Vi~-g~v~t~-e~a~~l~~aGaD~I~vg~g~ 301 (490)
T 4avf_A 228 ADTGERVAALVAAGVDVVVVDTAHGHSK----GVIERVRWVKQTFPDVQVIG-GNIATA-EAAKALAEAGADAVKVGIGP 301 (490)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCCSBH----HHHHHHHHHHHHCTTSEEEE-EEECSH-HHHHHHHHTTCSEEEECSSC
T ss_pred cchHHHHHHHhhcccceEEecccCCcch----hHHHHHHHHHHHCCCceEEE-eeeCcH-HHHHHHHHcCCCEEEECCCC
Confidence 3556778888899999999997776421 224678888875 3666655 113444 36778899999999983211
Q ss_pred cc-----------ccc---HHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCCEEEEEeecCC
Q 023494 149 SS-----------TIH---LHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPG 199 (281)
Q Consensus 149 ~~-----------~~~---i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG 199 (281)
.+ ..+ +.++.+.+++.++.+..+=.-.++-+..+.+...+|.|++.+...|
T Consensus 302 Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~GAd~V~vGs~~~~ 366 (490)
T 4avf_A 302 GSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVAGAYCVMMGSMFAG 366 (490)
T ss_dssp STTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHHTCSEEEECTTTTT
T ss_pred CcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHcCCCeeeecHHHhc
Confidence 00 112 2334444444565554432223344433334446999988654433
No 300
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=92.36 E-value=1.7 Score=38.26 Aligned_cols=128 Identities=16% Similarity=0.268 Sum_probs=78.4
Q ss_pred cChhhHHHHHHHcCCCEEEEcccccccccHH-HHHHHHHH-cCCcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCC--
Q 023494 125 VEPEQRVPDFIKAGADIVSVHCEQSSTIHLH-RTLNQIKD-LGAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPG-- 199 (281)
Q Consensus 125 ~dp~~~i~~~~~aGAd~Itvh~Ea~~~~~i~-~~l~~ik~-~G~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG-- 199 (281)
-||.+....+.++|||+||+|.-. +..|+. +-+..+++ ...+.-+-.+|.... +.-.++ .++.|.+..-.+.
T Consensus 25 Pdpv~aA~~ae~aGAdgITvHlRe-DrRHI~d~Dv~~L~~~~~~~lNlE~a~t~em--i~ia~~~kP~~vtLVPE~r~e~ 101 (243)
T 1m5w_A 25 PDPVQAAFIAEQAGADGITVHLRE-DRRHITDRDVRILRQTLDTRMNLEMAVTEEM--LAIAVETKPHFCCLVPEKRQEV 101 (243)
T ss_dssp SCHHHHHHHHHTTTCSEEEEECCT-TCSSSCHHHHHHHHHHCSSEEEEEECSSHHH--HHHHHHHCCSEEEECCCCSSCS
T ss_pred CCHHHHHHHHHHcCCCEEEeCCCC-CcccCCHHHHHHHHHhcCCCEEeccCCCHHH--HHHHHHcCCCEEEECCCCCCCc
Confidence 356666667789999999999763 223322 33444443 355777777764322 222222 4789877533221
Q ss_pred -C-CCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEccccc
Q 023494 200 -F-GGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVF 258 (281)
Q Consensus 200 -~-~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf 258 (281)
. +|-.+ ..-.++|+.+.+.+.+.|..+-+-+| =.++.+....+.|||.+=+=+.=|
T Consensus 102 TTegGldv-~~~~~~l~~~i~~L~~~GIrVSLFID--pd~~qi~aA~~~GA~~IELhTG~Y 159 (243)
T 1m5w_A 102 TTEGGLDV-AGQRDKMRDACKRLADAGIQVSLFID--ADEEQIKAAAEVGAPFIEIHTGCY 159 (243)
T ss_dssp SCCSCCCS-GGGHHHHHHHHHHHHHTTCEEEEEEC--SCHHHHHHHHHTTCSEEEEECHHH
T ss_pred CCCcchhH-HhhHHHHHHHHHHHHHCCCEEEEEeC--CCHHHHHHHHHhCcCEEEEechhh
Confidence 1 23333 34467788777777776644445567 356789999999999887665443
No 301
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=92.31 E-value=0.65 Score=40.97 Aligned_cols=111 Identities=15% Similarity=0.187 Sum_probs=65.8
Q ss_pred HHHHHHcCCCEEEEccccc-----ccccHHHHHHHHHHc--C--CcEEEEECCCCCHHHHHHhh---c--cCCEEEEEee
Q 023494 131 VPDFIKAGADIVSVHCEQS-----STIHLHRTLNQIKDL--G--AKAGVVLNPATSLSAIECVL---D--VVDLVLIMSV 196 (281)
Q Consensus 131 i~~~~~aGAd~Itvh~Ea~-----~~~~i~~~l~~ik~~--G--~k~Glai~p~t~ie~~~~~l---~--~vD~IlvmsV 196 (281)
.+.+.+.|||-|-+|..-. ..+.+.+.++.+++. + +|+.+....= ..+.+.... . .+|+|=.
T Consensus 101 a~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L-t~eei~~a~~ia~~aGADfVKT--- 176 (239)
T 3ngj_A 101 TKVAVEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCYL-TNEEKVEVCKRCVAAGAEYVKT--- 176 (239)
T ss_dssp HHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGS-CHHHHHHHHHHHHHHTCSEEEC---
T ss_pred HHHHHHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCCC-CHHHHHHHHHHHHHHCcCEEEC---
Confidence 5567889999999996531 112244444444443 3 2332222111 223333331 1 3799842
Q ss_pred cCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEE
Q 023494 197 NPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANAL 251 (281)
Q Consensus 197 ~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~ 251 (281)
-.||+. ...+++.++.+|+.... ++.|-+.|||+ .+++..++++||+-+
T Consensus 177 STGf~~---ggAt~~dv~lmr~~vg~---~v~VKasGGIrt~~da~~~i~aGA~ri 226 (239)
T 3ngj_A 177 STGFGT---HGATPEDVKLMKDTVGD---KALVKAAGGIRTFDDAMKMINNGASRI 226 (239)
T ss_dssp CCSSSS---CCCCHHHHHHHHHHHGG---GSEEEEESSCCSHHHHHHHHHTTEEEE
T ss_pred CCCCCC---CCCCHHHHHHHHHhhCC---CceEEEeCCCCCHHHHHHHHHhcccce
Confidence 335531 12456677777777643 47888999999 789999999999943
No 302
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=92.27 E-value=2.8 Score=37.19 Aligned_cols=182 Identities=12% Similarity=0.126 Sum_probs=103.8
Q ss_pred ceEeEEEecc-CccCHHHHHHHHHHcCCCeEEEEeeeCcccccc------cCCHHHHHHcCcC---CCCCeeEEEEecCh
Q 023494 58 IIVSPSILSA-NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNI------TIGPLVVDALRPV---TDLPLDVHLMIVEP 127 (281)
Q Consensus 58 ~~i~pSila~-D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~------~~G~~~I~~ir~~---t~~~idaHLmv~dp 127 (281)
+.+.+...+. |.....+.++.+.++|++.+-. +.|-|.. .+|.+..+.++++ .++|+... +-||
T Consensus 24 ~~vIAgpc~~~~~e~a~~~a~~l~~~Ga~~vk~----~~fkprts~~~~~g~~~egl~~l~~~~~~~Gl~~~te--~~d~ 97 (262)
T 1zco_A 24 FTIIAGPCSIESREQIMKVAEFLAEVGIKVLRG----GAFKPRTSPYSFQGYGEKALRWMREAADEYGLVTVTE--VMDT 97 (262)
T ss_dssp CEEEEECSBCCCHHHHHHHHHHHHHTTCCEEEC----BSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEE--CCCG
T ss_pred cEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEE----EecccCCCcccccCccHHHHHHHHHHHHHcCCcEEEe--eCCH
Confidence 4444444332 4444556667788999987544 4555432 2235555555543 56776663 3455
Q ss_pred hhHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhc------cCCEEEEEe---ecC
Q 023494 128 EQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD------VVDLVLIMS---VNP 198 (281)
Q Consensus 128 ~~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~------~vD~Ilvms---V~p 198 (281)
.. ++.+.+. +|++-+.... ..+ ..+++++-+.|+-+++.-...-.++++..-++ .-+.+++.. ..+
T Consensus 98 ~~-~~~l~~~-vd~~kIga~~--~~n-~~ll~~~a~~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~ 172 (262)
T 1zco_A 98 RH-VELVAKY-SDILQIGARN--SQN-FELLKEVGKVENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFE 172 (262)
T ss_dssp GG-HHHHHHH-CSEEEECGGG--TTC-HHHHHHHTTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSC
T ss_pred Hh-HHHHHhh-CCEEEECccc--ccC-HHHHHHHHhcCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCC
Confidence 43 5566677 8999999874 233 34677777789999998776634544433332 135555441 112
Q ss_pred CCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEe----cCCCh---hcHHHHHHcCCcEEEEccccc
Q 023494 199 GFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVD----GGVGP---KNAYKVIEAGANALVAGSAVF 258 (281)
Q Consensus 199 G~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VD----GGI~~---e~i~~~~~aGAD~~VvGSaIf 258 (281)
++ +...-.+..+..+++.. +++|.+| +|... ......+..|||++++=+-+.
T Consensus 173 ~y---~~~~v~L~ai~~lk~~~-----~~pVi~d~sH~~g~~~~v~~~~~aAva~Ga~Gl~iE~H~~ 231 (262)
T 1zco_A 173 TA---TRFTLDISAVPVVKELS-----HLPIIVDPSHPAGRRSLVIPLAKAAYAIGADGIMVEVHPE 231 (262)
T ss_dssp CS---SSSBCCTTHHHHHHHHB-----SSCEEECSSTTTCSGGGHHHHHHHHHHTTCSEEEEEBCSS
T ss_pred Cc---ChhhcCHHHHHHHHhhh-----CCCEEEEcCCCCCccchHHHHHHHHHHcCCCEEEEEecCC
Confidence 22 22222244555666542 3566554 33322 335567889999999998854
No 303
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=92.26 E-value=1.2 Score=43.34 Aligned_cols=116 Identities=16% Similarity=0.222 Sum_probs=76.8
Q ss_pred hhHHHHHHHcCCCEEEEccccc---ccccHHHHHHHHHH-------c-CCcEEEEECCCC-CHHHHHHhhc-cCCEEEEE
Q 023494 128 EQRVPDFIKAGADIVSVHCEQS---STIHLHRTLNQIKD-------L-GAKAGVVLNPAT-SLSAIECVLD-VVDLVLIM 194 (281)
Q Consensus 128 ~~~i~~~~~aGAd~Itvh~Ea~---~~~~i~~~l~~ik~-------~-G~k~Glai~p~t-~ie~~~~~l~-~vD~Ilvm 194 (281)
.+..+.+.+.+...+.|--|.. ...+.+.+++.+.. . ...+++.+.... ..++++.+++ .+|.|.+-
T Consensus 196 ~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~p~a~~D~~~rl~V~aavg~~~d~~era~aLveaGvd~I~Id 275 (511)
T 3usb_A 196 SEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEFPNSAKDKQGRLLVGAAVGVTADAMTRIDALVKASVDAIVLD 275 (511)
T ss_dssp HHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhcccchhhhccceeeeeeeeeccchHHHHHHHHhhccceEEec
Confidence 3456677888888887765532 12356777777654 1 235677776543 3566666666 48998876
Q ss_pred eecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCC-ChhcHHHHHHcCCcEEEEc
Q 023494 195 SVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGV-GPKNAYKVIEAGANALVAG 254 (281)
Q Consensus 195 sV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI-~~e~i~~~~~aGAD~~VvG 254 (281)
+.++. ....++.|+++++..+ +.++. .|+| +.+.+..+.++|||.+++|
T Consensus 276 ~a~g~------~~~v~~~i~~i~~~~~----~~~vi-~g~v~t~e~a~~~~~aGad~i~vg 325 (511)
T 3usb_A 276 TAHGH------SQGVIDKVKEVRAKYP----SLNII-AGNVATAEATKALIEAGANVVKVG 325 (511)
T ss_dssp CSCTT------SHHHHHHHHHHHHHCT----TSEEE-EEEECSHHHHHHHHHHTCSEEEEC
T ss_pred ccccc------hhhhhhHHHHHHHhCC----CceEE-eeeeccHHHHHHHHHhCCCEEEEC
Confidence 55432 2356777888887653 24564 4455 5889999999999999985
No 304
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=92.25 E-value=1.9 Score=37.67 Aligned_cols=170 Identities=17% Similarity=0.207 Sum_probs=92.9
Q ss_pred EeEEEeccCc--cCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChh-------h-
Q 023494 60 VSPSILSANF--AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPE-------Q- 129 (281)
Q Consensus 60 i~pSila~D~--~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~-------~- 129 (281)
|-=++|.-|. .++++.++.+.+.|...+-+ .|.+++..+...+..+.++.-+.=|. +
T Consensus 17 IDhTlL~p~~t~~~i~~lc~eA~~~~~~aVcV-------------~p~~v~~a~~l~~~~v~v~tVigFP~G~~~~~~K~ 83 (231)
T 3ndo_A 17 VDHTLLKPEATPSDVTALVDEAADLGVFAVCV-------------SPPLVSVAAGVAPSGLAIAAVAGFPSGKHVPGIKA 83 (231)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHHHTCSEEEE-------------CGGGHHHHHHHCCTTCEEEEEESTTTCCSCHHHHH
T ss_pred cCcccCCCCCCHHHHHHHHHHHHHhCCcEEEE-------------CHHHHHHHHHhcCCCCeEEEEecCCCCCCcHHHHH
Confidence 4444544332 24445555666677766543 22233332211234466666665442 1
Q ss_pred -HHHHHHHcCCCEEEEccccc-----ccccHHHHHHHHHHc--CCcEEEEECC------CCCHHHHHHh---hc--cCCE
Q 023494 130 -RVPDFIKAGADIVSVHCEQS-----STIHLHRTLNQIKDL--GAKAGVVLNP------ATSLSAIECV---LD--VVDL 190 (281)
Q Consensus 130 -~i~~~~~aGAd~Itvh~Ea~-----~~~~i~~~l~~ik~~--G~k~Glai~p------~t~ie~~~~~---l~--~vD~ 190 (281)
-.+.+.+.|||-|-++..-. ..+.+.+.++.+++. |..+=+.+.. .|+ +.+... .. .+|+
T Consensus 84 ~E~~~Ai~~GAdEIDmVinig~lk~g~~~~v~~ei~~v~~a~~~~~lKvIiEt~~L~~~~t~-eei~~a~~ia~~aGADf 162 (231)
T 3ndo_A 84 TEAELAVAAGATEIDMVIDVGAALAGDLDAVSADITAVRKAVRAATLKVIVESAALLEFSGE-PLLADVCRVARDAGADF 162 (231)
T ss_dssp HHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCHHHHHHHTCH-HHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHcCCCEEEEEeehHhhhcccHHHHHHHHHHHHHHccCCceEEEEECcccCCCCCH-HHHHHHHHHHHHHCcCE
Confidence 25567899999999996531 112344455555554 3322222221 122 222222 21 3798
Q ss_pred EEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEE
Q 023494 191 VLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANAL 251 (281)
Q Consensus 191 IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~ 251 (281)
|= ..-||.. ....+++.++.+++... .++.|-+.|||+ .+++..++++||+-+
T Consensus 163 VK---TSTGf~~--~~gAt~edv~lm~~~v~---~~v~VKaaGGIrt~~~a~~~i~aGa~Ri 216 (231)
T 3ndo_A 163 VK---TSTGFHP--SGGASVQAVEIMARTVG---ERLGVKASGGIRTAEQAAAMLDAGATRL 216 (231)
T ss_dssp EE---CCCSCCT--TCSCCHHHHHHHHHHHT---TTSEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred EE---cCCCCCC--CCCCCHHHHHHHHHHhC---CCceEEEeCCCCCHHHHHHHHHhcchhc
Confidence 84 2335530 12345677777777764 357899999999 789999999999943
No 305
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=92.23 E-value=0.55 Score=40.95 Aligned_cols=124 Identities=15% Similarity=0.127 Sum_probs=76.0
Q ss_pred ceEeEEEecc---------CccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEec--C
Q 023494 58 IIVSPSILSA---------NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIV--E 126 (281)
Q Consensus 58 ~~i~pSila~---------D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~--d 126 (281)
++|+-+.++. ....+++.++.+.+.|.+.|++. + +.| .+..++++-+..++.+.++.... +
T Consensus 10 mklg~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~---~-~~~----~~~~~~~~l~~~gl~~~~~~~~~~~~ 81 (301)
T 3cny_A 10 IKWGIAPIGWRNDDIPSIGKDNNLQQLLSDIVVAGFQGTEVG---G-FFP----GPEKLNYELKLRNLEIAGQWFSSYII 81 (301)
T ss_dssp EEEEECGGGTCCSSSTTTTTTCCHHHHHHHHHHHTCCEECCC---T-TCC----CHHHHHHHHHHTTCEECEEEEEECHH
T ss_pred eeEEeccccccCccccccccCCCHHHHHHHHHHhCCCEEEec---C-CCC----CHHHHHHHHHHCCCeEEEEeccCCCC
Confidence 4566555555 23578999999999999998774 2 223 34444444333566666652221 1
Q ss_pred h----------hhHHHHHHHcCCCEEEEcc-------cc-c--c--------------cccHHHHHHHHHHcCCcEEEEE
Q 023494 127 P----------EQRVPDFIKAGADIVSVHC-------EQ-S--S--------------TIHLHRTLNQIKDLGAKAGVVL 172 (281)
Q Consensus 127 p----------~~~i~~~~~aGAd~Itvh~-------Ea-~--~--------------~~~i~~~l~~ik~~G~k~Glai 172 (281)
| .+.++.+.+.|++.|.+|. .. . + .+.+.++.+.++++|+++++--
T Consensus 82 ~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~ 161 (301)
T 3cny_A 82 RDGIEKASEAFEKHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAYHH 161 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred hhhHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCEEEEec
Confidence 2 1345566789999999984 10 0 0 1124566677788999988876
Q ss_pred CCC---CCHHHHHHhhccCC
Q 023494 173 NPA---TSLSAIECVLDVVD 189 (281)
Q Consensus 173 ~p~---t~ie~~~~~l~~vD 189 (281)
.+. ...+.+..+++.++
T Consensus 162 ~~~~~~~~~~~~~~l~~~~~ 181 (301)
T 3cny_A 162 HMGTGIQTKEETDRLMANTD 181 (301)
T ss_dssp CTTSSSCSHHHHHHHHHTSC
T ss_pred CCCcccCCHHHHHHHHHhCC
Confidence 554 34566777777654
No 306
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=92.22 E-value=0.41 Score=43.20 Aligned_cols=95 Identities=19% Similarity=0.181 Sum_probs=54.3
Q ss_pred ccCHHHHHHHHHHcCCCeEEEEeeeCccccc------ccC---CHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCC
Q 023494 69 FAKLGEQVKAVELAGCDWIHVDVMDGRFVPN------ITI---GPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGA 139 (281)
Q Consensus 69 ~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn------~~~---G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGA 139 (281)
+....+..+.+.+.|+|+| ||-=-..=|. ... =..+++.+++.++.|+-+ =+.+|. .++.+.++|+
T Consensus 37 ~~~a~~~a~~~v~~GAdiI--DIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~piSI--DT~~~~-va~aAl~aGa 111 (282)
T 1aj0_A 37 LIDAVKHANLMINAGATII--DVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISV--DTSKPE-VIRESAKVGA 111 (282)
T ss_dssp HHHHHHHHHHHHHHTCSEE--EEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCEEEE--ECCCHH-HHHHHHHTTC
T ss_pred HHHHHHHHHHHHHCCCCEE--EECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCeEEE--eCCCHH-HHHHHHHcCC
Confidence 3344445566677899986 4432111132 101 123455555544555544 345554 6778889999
Q ss_pred CEEE-EcccccccccHHHHHHHHHHcCCcEEEEEC
Q 023494 140 DIVS-VHCEQSSTIHLHRTLNQIKDLGAKAGVVLN 173 (281)
Q Consensus 140 d~It-vh~Ea~~~~~i~~~l~~ik~~G~k~Glai~ 173 (281)
++|- +..+. . .+.++.++++|..+.+.-+
T Consensus 112 ~iINdvsg~~--d---~~~~~~~a~~~~~vVlmh~ 141 (282)
T 1aj0_A 112 HIINDIRSLS--E---PGALEAAAETGLPVCLMHM 141 (282)
T ss_dssp CEEEETTTTC--S---TTHHHHHHHHTCCEEEECC
T ss_pred CEEEECCCCC--C---HHHHHHHHHhCCeEEEEcc
Confidence 9884 33331 2 2567778889988887654
No 307
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=92.14 E-value=3.7 Score=37.40 Aligned_cols=181 Identities=15% Similarity=0.238 Sum_probs=112.7
Q ss_pred CccCHHHHHHHHHHcCCCeEEEEeeeCc--ccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEc
Q 023494 68 NFAKLGEQVKAVELAGCDWIHVDVMDGR--FVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVH 145 (281)
Q Consensus 68 D~~~l~~~l~~l~~~G~d~iHiDImDG~--fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh 145 (281)
++..+.-.++.+++.+...| +-+-.|. |.+ ..+-..+++...+ .+.|+-+||==..-.+.+..+.++|.+.|-+=
T Consensus 26 n~e~~~Ail~AAee~~sPvI-lq~s~g~~~y~g-~~~~~~~v~~~a~-~~VPValHlDHg~~~e~~~~ai~~GFtSVMiD 102 (305)
T 1rvg_A 26 NMEFLQAVLEAAEEQRSPVI-LALSEGAMKYGG-RALTLMAVELAKE-ARVPVAVHLDHGSSYESVLRALRAGFTSVMID 102 (305)
T ss_dssp SHHHHHHHHHHHHHTTCCEE-EEEEHHHHHHHH-HHHHHHHHHHHHH-CSSCEEEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred CHHHHHHHHHHHHHhCCCEE-EECChhHHhhCC-HHHHHHHHHHHHh-CCCcEEEECCCCCCHHHHHHHHHcCCCeeeeC
Confidence 33344456677777777765 5444442 221 1111234555555 77999999976544557788899998888765
Q ss_pred ccccc----cccHHHHHHHHHHcCCcEEEEE--------------C--CCCCHHHHHHhhc--cCCEEEE--EeecCCCC
Q 023494 146 CEQSS----TIHLHRTLNQIKDLGAKAGVVL--------------N--PATSLSAIECVLD--VVDLVLI--MSVNPGFG 201 (281)
Q Consensus 146 ~Ea~~----~~~i~~~l~~ik~~G~k~Glai--------------~--p~t~ie~~~~~l~--~vD~Ilv--msV~pG~~ 201 (281)
.-..+ ...-+++++.+++.|+-+-.-| + .-|..+...++.+ .+|.+.+ .++|--+.
T Consensus 103 gS~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk 182 (305)
T 1rvg_A 103 KSHEDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVDEKDALLTNPEEARIFMERTGADYLAVAIGTSHGAYK 182 (305)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCSCC------CCTTCCCHHHHHHHHHHHCCSEEEECSSCCSSSBC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCccCCccccccccccCCHHHHHHHHHHHCCCEEEEecCccccccC
Confidence 43222 1234577888888887652211 1 1277777888776 4897654 23331122
Q ss_pred --CCccchhHHHHHHHHHHHhhhcCCCCeEEEec-----------------------CCChhcHHHHHHcCCcEEEEccc
Q 023494 202 --GQSFIESQVKKISDLRRMCLEKGVNPWIEVDG-----------------------GVGPKNAYKVIEAGANALVAGSA 256 (281)
Q Consensus 202 --GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDG-----------------------GI~~e~i~~~~~aGAD~~VvGSa 256 (281)
|.+ .-.+++|+++++.+ ++++..=| |+..+.++++++.|+.-+=+++.
T Consensus 183 ~~g~p--~L~~~~L~~I~~~~-----~vpLVlHGgSsv~~~~~~~~~~~gg~~~~~~G~p~e~i~~ai~~GV~KiNi~Td 255 (305)
T 1rvg_A 183 GKGRP--FIDHARLERIARLV-----PAPLVLHGASAVPPELVERFRASGGEIGEAAGIHPEDIKKAISLGIAKINTDTD 255 (305)
T ss_dssp SSSSC--CCCHHHHHHHHHHC-----CSCEEECSCCCCCHHHHHHHHHTTCCCCSCBCCCHHHHHHHHHTTEEEEEECHH
T ss_pred CCCCC--ccCHHHHHHHHHhc-----CCCEEEeCCCCCcHHHHHHHHhhccccccCCCCCHHHHHHHHHCCCeEEEEChH
Confidence 221 12256667776654 37888877 66789999999999999999987
Q ss_pred cc
Q 023494 257 VF 258 (281)
Q Consensus 257 If 258 (281)
+.
T Consensus 256 l~ 257 (305)
T 1rvg_A 256 LR 257 (305)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 308
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=92.12 E-value=0.85 Score=39.34 Aligned_cols=127 Identities=14% Similarity=0.045 Sum_probs=78.3
Q ss_pred ceEeEEEeccCc-----cCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEE----e----
Q 023494 58 IIVSPSILSANF-----AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLM----I---- 124 (281)
Q Consensus 58 ~~i~pSila~D~-----~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLm----v---- 124 (281)
++|+-|.++... ..+++.++.+.+.|.+.+++-.. .+.| .. ....+++..+..++.+..|-- .
T Consensus 6 ~kl~~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~vEl~~~--~~~~-~~-~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~ 81 (264)
T 1yx1_A 6 HPVSISLSSYGADLVRSRGQASFLPLLAMAGAQRVELREE--LFAG-PP-DTEALTAAIQLQGLECVFSSPLELWREDGQ 81 (264)
T ss_dssp CCEEEEGGGGCHHHHHHHCGGGGHHHHHHHTCSEEEEEGG--GCSS-CC-CHHHHHHHHHHTTCEEEEEEEEEEECTTSS
T ss_pred CceeeechhhcchhccCcCHHHHHHHHHHcCCCEEEEEHH--hcCC-CH-HHHHHHHHHHHcCCEEEEecchhhcCCchh
Confidence 456666666533 24577899999999999988522 2222 12 344444433335666555421 1
Q ss_pred --cChhhHHHHHHHcCCCEEEEccccc-ccccHHHHHHHHHHcCCcEEEEECCCC---CHHHHHHhhccC
Q 023494 125 --VEPEQRVPDFIKAGADIVSVHCEQS-STIHLHRTLNQIKDLGAKAGVVLNPAT---SLSAIECVLDVV 188 (281)
Q Consensus 125 --~dp~~~i~~~~~aGAd~Itvh~Ea~-~~~~i~~~l~~ik~~G~k~Glai~p~t---~ie~~~~~l~~v 188 (281)
..-.+.++.+.+.|+..|.+|.-.. ....+.++.+.++++|+++++--.+.+ ..+.+..+++.+
T Consensus 82 ~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~~~~~~~~~~ll~~v 151 (264)
T 1yx1_A 82 LNPELEPTLRRAEACGAGWLKVSLGLLPEQPDLAALGRRLARHGLQLLVENDQTPQGGRIEVLERFFRLA 151 (264)
T ss_dssp BCTTHHHHHHHHHHTTCSEEEEEEECCCSSCCHHHHHHHHTTSSCEEEEECCSSHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEecCCCCcHHHHHHHHHHHHhcCCEEEEecCCCCCCCCHHHHHHHHHHH
Confidence 1122456777889999999985421 123688889999999999888755432 345566666554
No 309
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A
Probab=92.07 E-value=0.39 Score=47.57 Aligned_cols=121 Identities=11% Similarity=0.127 Sum_probs=80.3
Q ss_pred HHHHcCCCEEEEcccccccccH---HHHHHHHHH----cC------CcEEEEECCCCCHHHHHHhhccCCEEEEEeecC-
Q 023494 133 DFIKAGADIVSVHCEQSSTIHL---HRTLNQIKD----LG------AKAGVVLNPATSLSAIECVLDVVDLVLIMSVNP- 198 (281)
Q Consensus 133 ~~~~aGAd~Itvh~Ea~~~~~i---~~~l~~ik~----~G------~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~p- 198 (281)
.+.+.|+..|-|+.-. +.+++ .+.++.++. .| .++|+.+....-+..+.+++..+|++.+.+.+-
T Consensus 381 rA~~~G~~~Im~PmV~-s~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~vDf~siGtNDLt 459 (572)
T 2wqd_A 381 RASVYGKLNIMFPMVA-TINEFREAKAILLEEKENLKNEGHDISDDIELGIMVEIPATAALADVFAKEVDFFSIGTNDLI 459 (572)
T ss_dssp HHTTTSCEEEEESCCC-SHHHHHHHHHHHHHHHHHHHHHTCCCCSCCEEEEEECCHHHHHTHHHHHHHCSEEEECHHHHH
T ss_pred HHHhcCCCEEEEeCCC-CHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEEccHHHHHHHHHHHHhCCEEEECHHHHH
Confidence 3445677788887654 24453 334444443 24 567888854434466777777799998854321
Q ss_pred -------------CCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecC--CChhcHHHHHHcCCcEEEEccc
Q 023494 199 -------------GFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGG--VGPKNAYKVIEAGANALVAGSA 256 (281)
Q Consensus 199 -------------G~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGG--I~~e~i~~~~~aGAD~~VvGSa 256 (281)
+..+++|.|.++.-|+.+.+-.... +.++.|=|. -+++.++.++..|.|.+.++..
T Consensus 460 Q~~lg~dR~~~~v~~~~dp~~paVl~li~~vv~aa~~~--g~~vgiCGe~agdp~~~~~l~~lG~~~~S~~p~ 530 (572)
T 2wqd_A 460 QYTLAADRMSERVSYLYQPYNPSILRLVKQVIEASHKE--GKWTGMCGEMAGDETAIPLLLGLGLDEFSMSAT 530 (572)
T ss_dssp HHHHTCCSSSGGGGGGCCTTCHHHHHHHHHHHHHHHHT--TCEEEECSGGGGCTTTHHHHHHHTCCEEEECHH
T ss_pred HHHhccCCCccccccccCCCCHHHHHHHHHHHHHHHHh--CCeEEEeCCccCCHHHHHHHHHCCCCEEEeccc
Confidence 2235778899988888887776554 467776332 2688999999999999998854
No 310
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=92.05 E-value=0.37 Score=43.85 Aligned_cols=99 Identities=14% Similarity=0.200 Sum_probs=55.7
Q ss_pred ccCHHHHHHHHHHcCCCeEEEEeeeCccccc---ccCC------HHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCC
Q 023494 69 FAKLGEQVKAVELAGCDWIHVDVMDGRFVPN---ITIG------PLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGA 139 (281)
Q Consensus 69 ~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn---~~~G------~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGA 139 (281)
.....+..+.+.+.|+|+|-|.-.- .=|. .+.. ..+|+.+++..+.|+-+| +.+|+ .++.+.++|+
T Consensus 62 ~~~a~~~a~~~v~~GAdiIDIGgeS--trPga~~v~~~eE~~RvvpvI~~l~~~~~vpiSID--T~~~~-V~~aAl~aGa 136 (297)
T 1tx2_A 62 VDAAVRHAKEMRDEGAHIIDIGGES--TRPGFAKVSVEEEIKRVVPMIQAVSKEVKLPISID--TYKAE-VAKQAIEAGA 136 (297)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEESCC------CCCCCHHHHHHHHHHHHHHHHHHSCSCEEEE--CSCHH-HHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCc--CCCCCCCCCHHHHHHHHHHHHHHHHhcCCceEEEe--CCCHH-HHHHHHHcCC
Confidence 3344445566678899987443111 1122 1111 123355555456777664 35655 5677888899
Q ss_pred CEEE-EcccccccccHHHHHHHHHHcCCcEEEEECCCC
Q 023494 140 DIVS-VHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT 176 (281)
Q Consensus 140 d~It-vh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t 176 (281)
++|- +-.+. . ..+.++.++++|..+.+.-+..+
T Consensus 137 ~iINdvsg~~---~-d~~m~~~aa~~g~~vVlmh~~G~ 170 (297)
T 1tx2_A 137 HIINDIWGAK---A-EPKIAEVAAHYDVPIILMHNRDN 170 (297)
T ss_dssp CEEEETTTTS---S-CTHHHHHHHHHTCCEEEECCCSC
T ss_pred CEEEECCCCC---C-CHHHHHHHHHhCCcEEEEeCCCC
Confidence 9983 22221 1 23677888999988877765444
No 311
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=92.05 E-value=2.8 Score=37.39 Aligned_cols=136 Identities=17% Similarity=0.186 Sum_probs=69.0
Q ss_pred HHHHHHcCcC-CCCCeeEEEEecChhhHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHc-CCcEEEEECCCCCHHHH
Q 023494 104 PLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL-GAKAGVVLNPATSLSAI 181 (281)
Q Consensus 104 ~~~I~~ir~~-t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~-G~k~Glai~p~t~ie~~ 181 (281)
+.+|.++|+. |.+-+.. --.||..+...+.+.||+++++..+..-..--.+.++.+|+. ++.+ +.-..--....+
T Consensus 52 ~~~IaE~K~asPs~g~i~--~~~~p~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v~lPv-l~kdfiid~~qv 128 (272)
T 3qja_A 52 IGVIAEVKRASPSAGALA--TIADPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVSIPV-LRKDFVVQPYQI 128 (272)
T ss_dssp CEEEEEEC---------------CHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHCSSCE-EEESCCCSHHHH
T ss_pred CeEEEEEecCCCCCCccC--CCCCHHHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhCCCCE-EECccccCHHHH
Confidence 3445566654 2222111 124777788888899999999997631011123466777764 3333 211111111113
Q ss_pred HH-hhccCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEcc
Q 023494 182 EC-VLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGS 255 (281)
Q Consensus 182 ~~-~l~~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGS 255 (281)
.+ ..-.+|.|++.... ..+. .++++.+...+.|....++| -+.+.+....++|+|++.++.
T Consensus 129 ~~A~~~GAD~VlLi~a~-------l~~~---~l~~l~~~a~~lGl~~lvev---~t~ee~~~A~~~Gad~IGv~~ 190 (272)
T 3qja_A 129 HEARAHGADMLLLIVAA-------LEQS---VLVSMLDRTESLGMTALVEV---HTEQEADRALKAGAKVIGVNA 190 (272)
T ss_dssp HHHHHTTCSEEEEEGGG-------SCHH---HHHHHHHHHHHTTCEEEEEE---SSHHHHHHHHHHTCSEEEEES
T ss_pred HHHHHcCCCEEEEeccc-------CCHH---HHHHHHHHHHHCCCcEEEEc---CCHHHHHHHHHCCCCEEEECC
Confidence 33 23358999875221 1122 34444444444444433443 357778888899999998873
No 312
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=92.05 E-value=1 Score=43.13 Aligned_cols=135 Identities=16% Similarity=0.156 Sum_probs=79.9
Q ss_pred HHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHh
Q 023494 105 LVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECV 184 (281)
Q Consensus 105 ~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~ 184 (281)
.+++.+++.++.|+.+ .+.||+ -++..++++++..-.-.-+ ..++.++....+.++|..+.+.-+ .++.++++
T Consensus 145 ~vVk~V~e~~dvPL~I--DS~dpe-vleaALea~a~~~plI~sa-t~dn~e~m~~lAa~y~~pVi~~~~---dl~~lkel 217 (446)
T 4djd_C 145 AAVASVAAATQLNLVL--MADDPD-VLKEALAGVADRKPLLYAA-TGANYEAMTALAKENNCPLAVYGN---GLEELAEL 217 (446)
T ss_dssp HHHHHHHTTCCSEEEE--ECSCHH-HHHHHHGGGGGGCCEEEEE-CTTTHHHHHHHHHHTTCCEEEECS---SHHHHHHH
T ss_pred HHHHHHHHhCCCCEEE--ecCCHH-HHHHHHHhhcCcCCeeEec-chhhHHHHHHHHHHcCCcEEEEec---cHHHHHHH
Confidence 4566666667788776 467876 5677778776521111111 134577889999999998888754 66666555
Q ss_pred hcc-----CCEEEEEeecCCCCCCccchhHHHHHHHHHHH---hhhcCCCCeEEEecCCChh-------cHHHHHHcCCc
Q 023494 185 LDV-----VDLVLIMSVNPGFGGQSFIESQVKKISDLRRM---CLEKGVNPWIEVDGGVGPK-------NAYKVIEAGAN 249 (281)
Q Consensus 185 l~~-----vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l---~~~~~~~~~I~VDGGI~~e-------~i~~~~~aGAD 249 (281)
... ++-|. .+||..| | .++++...++|.. -..+.+++++-. |.+.+ .+..++..|+|
T Consensus 218 v~~a~~~GI~~Iv---LDPG~~g--~-~~t~~~~~~iRr~AL~~~d~~LgyPvi~--~~sr~d~~~E~t~A~~~i~kga~ 289 (446)
T 4djd_C 218 VDKIVALGHKQLV---LDPGARE--T-SRAIADFTQIRRLAIKKRFRSFGYPIIA--LTTAANPLDEVLQAVNYVTKYAS 289 (446)
T ss_dssp HHHHHHTTCCCEE---EECCCCS--H-HHHHHHHHHHHHHHHHSCCGGGCSCBEE--ECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHCCCCcEE---ECCCchh--H-HHHHHHHHHHHHHhhhccCcccCCCEEe--ccCCccHHHHHHHHHHHHHcCCe
Confidence 432 44343 3899866 3 3455555555554 112234556432 22221 22456788999
Q ss_pred EEEEc
Q 023494 250 ALVAG 254 (281)
Q Consensus 250 ~~VvG 254 (281)
++++=
T Consensus 290 Iv~vh 294 (446)
T 4djd_C 290 LVVLR 294 (446)
T ss_dssp EEEES
T ss_pred EEEEc
Confidence 99874
No 313
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=92.00 E-value=1.4 Score=38.34 Aligned_cols=215 Identities=10% Similarity=-0.065 Sum_probs=109.0
Q ss_pred hhhhhccccccCCC-CCceEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCee-
Q 023494 42 TIVKASARVDKFSK-SDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLD- 119 (281)
Q Consensus 42 ~~~~~~~~~~~~~~-~~~~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~id- 119 (281)
++-+|++..++=.+ ++++|+-+.++..-..+++.++.+.+.|.+.+++..- + .....+.++++-+..++.+.
T Consensus 9 ~~~~~~~~~~~~~~~m~mklg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~--~----~~~~~~~~~~~l~~~gl~v~~ 82 (287)
T 3kws_A 9 NTAKGEKGSDKTGKDLELKLSFQEGIAPGESLNEKLDFMEKLGVVGFEPGGG--G----LAGRVNEIKQALNGRNIKVSA 82 (287)
T ss_dssp --------------CCCCEEEEETTSSCCSSHHHHHHHHHHTTCCEEECBST--T----CGGGHHHHHHHHTTSSCEECE
T ss_pred ccccccccCcccCCcceeeEEEEecccCCCCHHHHHHHHHHcCCCEEEecCC--c----hHHHHHHHHHHHHHcCCeEEE
Confidence 33445555554333 2467888877776678999999999999999877422 1 22233444443333455543
Q ss_pred EEEE------ecChh----------hHHHHHHHcCCCEEEEccccc--------c-------cccHHHHHHHHHHcCCcE
Q 023494 120 VHLM------IVEPE----------QRVPDFIKAGADIVSVHCEQS--------S-------TIHLHRTLNQIKDLGAKA 168 (281)
Q Consensus 120 aHLm------v~dp~----------~~i~~~~~aGAd~Itvh~Ea~--------~-------~~~i~~~l~~ik~~G~k~ 168 (281)
+|.- ..||. +.++.+.+.|++.|.+|.-.. . .+.+.++.+.++++|+++
T Consensus 83 ~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l 162 (287)
T 3kws_A 83 ICAGFKGFILSTDPAIRKECMDTMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSV 162 (287)
T ss_dssp EECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred EecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEE
Confidence 2321 12442 245566788999999984310 0 123566777788899998
Q ss_pred EEEECC---C---CCHHHHHHhhccCC--EEEEEeecCCC---CCCccchhHHHHHHHHHHHhhh-----c-CCCCeEEE
Q 023494 169 GVVLNP---A---TSLSAIECVLDVVD--LVLIMSVNPGF---GGQSFIESQVKKISDLRRMCLE-----K-GVNPWIEV 231 (281)
Q Consensus 169 Glai~p---~---t~ie~~~~~l~~vD--~IlvmsV~pG~---~GQ~f~~~~l~kI~~lr~l~~~-----~-~~~~~I~V 231 (281)
++--.+ . ...+.+..+++.++ .+-+ +.++|- .|.. ..+-|+++...+.. . +...+ =
T Consensus 163 ~lE~~~~~~~~~~~~~~~~~~ll~~v~~~~vg~-~~D~~h~~~~g~d----~~~~l~~~~~~i~~vHlkD~~~r~~p--G 235 (287)
T 3kws_A 163 IFEPLNRKECFYLRQVADAASLCRDINNPGVRC-MGDFWHMTWEETS----DMGAFISGGEYLQHVHVASRKRRSMP--G 235 (287)
T ss_dssp EECCCCTTTCSSCCCHHHHHHHHHHHCCTTEEE-EEEHHHHHHHCSC----HHHHHHHHGGGEEEEEECCTTTSCST--T
T ss_pred EEEecCcccCcccCCHHHHHHHHHHcCCCCeeE-EeehHHHHhcCCC----HHHHHHHhhhhEEEEEeCCCCCCCCC--C
Confidence 886432 1 24556666666543 3332 233331 2221 12233333322210 0 11111 2
Q ss_pred ecC--CChh-cHHHHHHcCCcEEEEcccccCCCCHHHHHHHH
Q 023494 232 DGG--VGPK-NAYKVIEAGANALVAGSAVFGAKDYAEAIKGI 270 (281)
Q Consensus 232 DGG--I~~e-~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l 270 (281)
+|. |+.. -+..+.+.|.+..++=- .+...||.+.+++-
T Consensus 236 ~G~d~id~~~i~~~L~~~gy~g~i~lE-~~~~~~~~~~~~~s 276 (287)
T 3kws_A 236 EDGDADNYINGFKGLKMIGYNNYVSFE-CGCQGDRNVVVPAA 276 (287)
T ss_dssp TTGGGCCCHHHHHHHHHTTCCSEEEEC-CCCSSCHHHHHHHH
T ss_pred CCCCCcCHHHHHHHHHHcCCCccEEEE-ecCCCCHHHHHHHH
Confidence 455 7744 55677888988655422 23345776555443
No 314
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=91.99 E-value=0.2 Score=46.80 Aligned_cols=106 Identities=17% Similarity=0.249 Sum_probs=73.0
Q ss_pred eEeEEEeccCccCHH---HHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHH
Q 023494 59 IVSPSILSANFAKLG---EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFI 135 (281)
Q Consensus 59 ~i~pSila~D~~~l~---~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~ 135 (281)
+--.|+..-|..+.+ ++++.|.++|+|.+-+- +|.. .-.+.++.||+.++.|+.+|+- .|| +....++
T Consensus 32 i~VQSMtnt~T~D~~atv~Qi~~l~~aG~diVRva------vp~~-~~a~al~~I~~~~~vPlvaDiH-f~~-~lal~a~ 102 (366)
T 3noy_A 32 IVVQSMTSTKTHDVEATLNQIKRLYEAGCEIVRVA------VPHK-EDVEALEEIVKKSPMPVIADIH-FAP-SYAFLSM 102 (366)
T ss_dssp CEEEEECCSCTTCHHHHHHHHHHHHHTTCCEEEEE------CCSH-HHHHHHHHHHHHCSSCEEEECC-SCH-HHHHHHH
T ss_pred EEEEEecCCCCcCHHHHHHHHHHHHHcCCCEEEeC------CCCh-HHHHHHHHHHhcCCCCEEEeCC-CCH-HHHHHHH
Confidence 345666666665554 66778889999987662 4542 2257788888878899888753 243 2455688
Q ss_pred HcCCCEEEEccccc-ccccHHHHHHHHHHcCCcEEEEEC
Q 023494 136 KAGADIVSVHCEQS-STIHLHRTLNQIKDLGAKAGVVLN 173 (281)
Q Consensus 136 ~aGAd~Itvh~Ea~-~~~~i~~~l~~ik~~G~k~Glai~ 173 (281)
++|+|.+-+-.-.. ..+.+.++++.++++|+-+=+-+|
T Consensus 103 e~G~dklRINPGNig~~~~~~~vv~~ak~~~~piRIGvN 141 (366)
T 3noy_A 103 EKGVHGIRINPGNIGKEEIVREIVEEAKRRGVAVRIGVN 141 (366)
T ss_dssp HTTCSEEEECHHHHSCHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HhCCCeEEECCcccCchhHHHHHHHHHHHcCCCEEEecC
Confidence 99999999885532 134567899999999986655433
No 315
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=91.96 E-value=0.57 Score=51.18 Aligned_cols=122 Identities=19% Similarity=0.262 Sum_probs=74.2
Q ss_pred HcCCCEEEEcccc--cccccHHHHHHHHHHc--CCcEEEEECCCCCH-HHHHHhhc-cCCEEEEEeecCCCCCCccch--
Q 023494 136 KAGADIVSVHCEQ--SSTIHLHRTLNQIKDL--GAKAGVVLNPATSL-SAIECVLD-VVDLVLIMSVNPGFGGQSFIE-- 207 (281)
Q Consensus 136 ~aGAd~Itvh~Ea--~~~~~i~~~l~~ik~~--G~k~Glai~p~t~i-e~~~~~l~-~vD~IlvmsV~pG~~GQ~f~~-- 207 (281)
..|.+.++-.... .+.+++.+.++.+|+. ++.+++-+-+...+ +....+.+ .+|.|.+-....|.++ .+.+
T Consensus 995 ~~Gv~lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~kAGAD~IvVsG~eGGTga-sp~~~~ 1073 (1520)
T 1ofd_A 995 KPGVTLISPPPHHDIYSIEDLAQLIYDLHQINPEAQVSVKLVAEIGIGTIAAGVAKANADIIQISGHDGGTGA-SPLSSI 1073 (1520)
T ss_dssp CTTCCEECCSSCTTCSSHHHHHHHHHHHHHHCTTSEEEEEEECSTTHHHHHHHHHHTTCSEEEEECTTCCCSS-EEHHHH
T ss_pred CCCCCeeCCCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEecCCCChHHHHHHHHHcCCCEEEEeCCCCccCC-Ccchhh
Confidence 3466666543221 0123456788888887 67778766554443 33333333 4899987444433222 2111
Q ss_pred -----hHHHHHHHHHHHhhhcCC--CCeEEEecCCC-hhcHHHHHHcCCcEEEEccccc
Q 023494 208 -----SQVKKISDLRRMCLEKGV--NPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVF 258 (281)
Q Consensus 208 -----~~l~kI~~lr~l~~~~~~--~~~I~VDGGI~-~e~i~~~~~aGAD~~VvGSaIf 258 (281)
-+..-|.++++.+...+. +++|.+||||. ...+.+++.+|||.+-+|++.+
T Consensus 1074 ~~~GlPt~~aL~ev~~al~~~glr~~IpVIAdGGIrtG~DVakALaLGAdaV~iGTafL 1132 (1520)
T 1ofd_A 1074 KHAGSPWELGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMAALMGAEEYGFGSIAM 1132 (1520)
T ss_dssp HHBCCCHHHHHHHHHHHHHHTTCGGGCEEEEESSCCSHHHHHHHHHTTCSEEECSHHHH
T ss_pred cCCchhHHHHHHHHHHHHHhcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeEEcHHHH
Confidence 123445666665543322 47899999999 6688899999999999998853
No 316
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=91.95 E-value=0.96 Score=42.14 Aligned_cols=113 Identities=10% Similarity=0.018 Sum_probs=76.2
Q ss_pred ChhhHHH---HHHHcCCCEEEEcccccccccHHHHHHHHHHc---CCcEEEEECCCCCHHHHHHhhcc-----CCEEEEE
Q 023494 126 EPEQRVP---DFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL---GAKAGVVLNPATSLSAIECVLDV-----VDLVLIM 194 (281)
Q Consensus 126 dp~~~i~---~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~---G~k~Glai~p~t~ie~~~~~l~~-----vD~Ilvm 194 (281)
+|+.+.+ .+.++|.+.+=+|.-..+.....+.++++|+. ++.+.+..|.....+...++++. +++|
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~avg~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i--- 238 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQPDGALDIARVTAVRKHLGDAVPLMVDANQQWDRPTAQRMCRIFEPFNLVWI--- 238 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCCSCHHHHHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGGGCCSCE---
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCEE---
Confidence 6776654 35678999999986421123345677888875 46788888888777665555432 4444
Q ss_pred eecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEE
Q 023494 195 SVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVA 253 (281)
Q Consensus 195 sV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~Vv 253 (281)
.|++.+..++-.+++++.. +++|..|+.+. ++.+..+++.| +|++.+
T Consensus 239 -------E~P~~~~~~~~~~~l~~~~-----~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 287 (393)
T 2og9_A 239 -------EEPLDAYDHEGHAALALQF-----DTPIATGEMLTSAAEHGDLIRHRAADYLMP 287 (393)
T ss_dssp -------ECCSCTTCHHHHHHHHHHC-----SSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred -------ECCCCcccHHHHHHHHHhC-----CCCEEeCCCcCCHHHHHHHHHCCCCCEEee
Confidence 2455555566666666543 47999999996 78888888877 787755
No 317
>3l52_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, PSI-2, protein structure initiative; 1.35A {Streptomyces avermitilis} PDB: 3v75_A*
Probab=91.90 E-value=0.43 Score=43.16 Aligned_cols=75 Identities=13% Similarity=0.073 Sum_probs=56.1
Q ss_pred cCCHH-------HHHHcCcCCCCCeeEEEEecChhhHHH----HHH----HcCCCEEEEcccccccccHHHHHHHHHHcC
Q 023494 101 TIGPL-------VVDALRPVTDLPLDVHLMIVEPEQRVP----DFI----KAGADIVSVHCEQSSTIHLHRTLNQIKDLG 165 (281)
Q Consensus 101 ~~G~~-------~I~~ir~~t~~~idaHLmv~dp~~~i~----~~~----~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G 165 (281)
.+|++ +++.+|+. ++++.+|+|..|...-+. .++ +.|+|.+|+|.-.. .+.++.+++.+++.|
T Consensus 75 ~~G~~G~~~l~~~i~~l~~~-g~~VflDlK~~DIpnTv~~ya~~~~~~~~~lg~D~vTvh~~~G-~~~l~~~~~~a~~~~ 152 (284)
T 3l52_A 75 RFGSRGVAVLEKTVAEARAA-GALVVMDAKRGDIGSTMAAYAEAFLRKDSPLFSDALTVSPYLG-YGSLRPAVELARESG 152 (284)
T ss_dssp TTHHHHHHHHHHHHHHHHHT-TCEEEEEEEECCCHHHHHHHHHHHSSTTSTTCCSEEEECCTTC-GGGGHHHHHHHHHHT
T ss_pred hcCHHHHHHHHHHHHHHHHC-CCcEEEEecccCcHHHHHHHHHHHhccccccCCcEEEEeccCC-HHHHHHHHHHHHhcC
Confidence 78888 77787774 789999999999875443 333 26899999998753 456888888888888
Q ss_pred CcEEEEECCCCC
Q 023494 166 AKAGVVLNPATS 177 (281)
Q Consensus 166 ~k~Glai~p~t~ 177 (281)
..+-+....+.|
T Consensus 153 kgvfvL~~tSnp 164 (284)
T 3l52_A 153 AGLFVLALTSNP 164 (284)
T ss_dssp CEEEEEEECCST
T ss_pred CeEEEEEeCCCC
Confidence 877666544444
No 318
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=91.72 E-value=1 Score=41.51 Aligned_cols=118 Identities=8% Similarity=0.021 Sum_probs=78.6
Q ss_pred ChhhHHH---HHHHcCCCEEEEcccccccccHHHHHHHHHHc---CCcEEEEECCCCCHHHHHHhhcc-----CCEEEEE
Q 023494 126 EPEQRVP---DFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL---GAKAGVVLNPATSLSAIECVLDV-----VDLVLIM 194 (281)
Q Consensus 126 dp~~~i~---~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~---G~k~Glai~p~t~ie~~~~~l~~-----vD~Ilvm 194 (281)
+|+.+.+ .+.+.|.+.+=+|.-..+.+...+.++++|+. ++.+.+..|.....+...++++. +++|
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i--- 222 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRPDLKEDVDRVSALREHLGDSFPLMVDANMKWTVDGAIRAARALAPFDLHWI--- 222 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCSSHHHHHHHHHHHHHHHCTTSCEEEECTTCSCHHHHHHHHHHHGGGCCSEE---
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEE---
Confidence 6766654 45678999999986431123344677777763 57788888888777665555432 4444
Q ss_pred eecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEEccccc
Q 023494 195 SVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVAGSAVF 258 (281)
Q Consensus 195 sV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~VvGSaIf 258 (281)
.|++.+..++-++++++.. +++|..|+.+. ++.+..+++.| +|++.+.-.-.
T Consensus 223 -------EqP~~~~d~~~~~~l~~~~-----~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~ 276 (371)
T 2ovl_A 223 -------EEPTIPDDLVGNARIVRES-----GHTIAGGENLHTLYDFHNAVRAGSLTLPEPDVSNI 276 (371)
T ss_dssp -------ECCSCTTCHHHHHHHHHHH-----CSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTT
T ss_pred -------ECCCCcccHHHHHHHHhhC-----CCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCcccc
Confidence 2555555566677776654 37999999996 78888887766 78887764433
No 319
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=91.67 E-value=1 Score=39.44 Aligned_cols=118 Identities=19% Similarity=0.180 Sum_probs=69.4
Q ss_pred HHHHHHcCCCEEEEcccccc-----cccHHHHHHHHHHcCCcEEEEECCCC-CHHHHHHhhc-----cCCEEEEEeecCC
Q 023494 131 VPDFIKAGADIVSVHCEQSS-----TIHLHRTLNQIKDLGAKAGVVLNPAT-SLSAIECVLD-----VVDLVLIMSVNPG 199 (281)
Q Consensus 131 i~~~~~aGAd~Itvh~Ea~~-----~~~i~~~l~~ik~~G~k~Glai~p~t-~ie~~~~~l~-----~vD~IlvmsV~pG 199 (281)
++.+.+.|||-|-++..-.. .+++.++.+.++++|+.+-+.+.... ..+.+..... .+|+|=. .-|
T Consensus 94 ~~~Av~~GAdEID~vinig~~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~~e~i~~a~ria~eaGADfVKT---sTG 170 (234)
T 1n7k_A 94 AQTVLEAGATELDVVPHLSLGPEAVYREVSGIVKLAKSYGAVVKVILEAPLWDDKTLSLLVDSSRRAGADIVKT---STG 170 (234)
T ss_dssp HHHHHHHTCCEEEECCCGGGCHHHHHHHHHHHHHHHHHTTCEEEEECCGGGSCHHHHHHHHHHHHHTTCSEEES---CCS
T ss_pred HHHHHHcCCCEEEEeccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEeccCCCHHHHHHHHHHHHHhCCCEEEe---CCC
Confidence 56788999999999975321 12455566666666765544443211 1233333222 3798842 335
Q ss_pred CCCCccchhHHHHHHH--HHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCc--EEEEccccc
Q 023494 200 FGGQSFIESQVKKISD--LRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGAN--ALVAGSAVF 258 (281)
Q Consensus 200 ~~GQ~f~~~~l~kI~~--lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD--~~VvGSaIf 258 (281)
|.+ +...+++.++. +++... ++|-+.|||+ .+++..++++||+ ..-.|..||
T Consensus 171 ~~~--~~gAt~~dv~l~~m~~~v~-----v~VKaaGGirt~~~al~~i~aGa~RiG~S~g~~I~ 227 (234)
T 1n7k_A 171 VYT--KGGDPVTVFRLASLAKPLG-----MGVKASGGIRSGIDAVLAVGAGADIIGTSSAVKVL 227 (234)
T ss_dssp SSC--CCCSHHHHHHHHHHHGGGT-----CEEEEESSCCSHHHHHHHHHTTCSEEEETTHHHHH
T ss_pred CCC--CCCCCHHHHHHHHHHHHHC-----CCEEEecCCCCHHHHHHHHHcCccccchHHHHHHH
Confidence 532 01234444444 554432 6888999999 7788889999999 444444444
No 320
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=91.62 E-value=0.92 Score=41.58 Aligned_cols=117 Identities=9% Similarity=0.059 Sum_probs=77.2
Q ss_pred cChhhHHH---HHHHcCCCEEEEcccccccccHHHHHHHHHHc---CCcEEEEECCCCCHHHHHHhhcc-----CCEEEE
Q 023494 125 VEPEQRVP---DFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL---GAKAGVVLNPATSLSAIECVLDV-----VDLVLI 193 (281)
Q Consensus 125 ~dp~~~i~---~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~---G~k~Glai~p~t~ie~~~~~l~~-----vD~Ilv 193 (281)
.+|+.+.+ .+.+.|.+.+=+|.-..+.....+.++++|+. ++.+.+..|.....+...++++. +++|
T Consensus 143 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i-- 220 (359)
T 1mdl_A 143 DGVKLATERAVTAAELGFRAVKTRIGYPALDQDLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGVTWI-- 220 (359)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEECCCSSHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHHTCSCE--
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCCeE--
Confidence 46766654 45678999999996421123345677777773 46777888877777665555432 4544
Q ss_pred EeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEEccc
Q 023494 194 MSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVAGSA 256 (281)
Q Consensus 194 msV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~VvGSa 256 (281)
.|++.+..++-++++++. .+++|..|+.+. ++.+.++++.| +|++.+.-.
T Consensus 221 --------E~P~~~~~~~~~~~l~~~-----~~iPI~~de~~~~~~~~~~~i~~~~~d~v~ik~~ 272 (359)
T 1mdl_A 221 --------EEPTLQHDYEGHQRIQSK-----LNVPVQMGENWLGPEEMFKALSIGACRLAMPDAM 272 (359)
T ss_dssp --------ECCSCTTCHHHHHHHHHT-----CSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTT
T ss_pred --------ECCCChhhHHHHHHHHHh-----CCCCEEeCCCCCCHHHHHHHHHcCCCCEEeecch
Confidence 255555556666666553 258999999996 78888887776 788877643
No 321
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=91.53 E-value=1.9 Score=39.12 Aligned_cols=95 Identities=19% Similarity=0.262 Sum_probs=51.2
Q ss_pred CccCHHHHHHHHHHcCCCeEEEEeeeCccccc---ccCC------HHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcC
Q 023494 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPN---ITIG------PLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAG 138 (281)
Q Consensus 68 D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn---~~~G------~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aG 138 (281)
|.....+..+.+.+.|+|+|-|...- .-|. ++.. ..+|+.+++. +.|+-+ =+.+|. .++.+.++|
T Consensus 50 ~~~~a~~~a~~~v~~GAdIIDIGgeS--TrPga~~v~~~eE~~Rv~pvI~~l~~~-~vpiSI--DT~~~~-Va~aAl~aG 123 (294)
T 2dqw_A 50 DPERALERAREMVAEGADILDLGAES--TRPGAAPVPVEEEKRRLLPVLEAVLSL-GVPVSV--DTRKPE-VAEEALKLG 123 (294)
T ss_dssp ---CCHHHHHHHHHHTCSEEEEECC-------------CCHHHHHHHHHHHHHTT-CSCEEE--ECSCHH-HHHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCc--CCCCCCCCCHHHHHHHHHHHHHHHHhC-CCeEEE--ECCCHH-HHHHHHHhC
Confidence 34444445566677899987443211 1121 1111 1234455443 555544 455655 677788899
Q ss_pred CCEEE-EcccccccccHHHHHHHHHHcCCcEEEEEC
Q 023494 139 ADIVS-VHCEQSSTIHLHRTLNQIKDLGAKAGVVLN 173 (281)
Q Consensus 139 Ad~It-vh~Ea~~~~~i~~~l~~ik~~G~k~Glai~ 173 (281)
+++|- +..+ ...+.+..++++|..+.+.-+
T Consensus 124 a~iINdVsg~-----~d~~m~~v~a~~~~~vVlmh~ 154 (294)
T 2dqw_A 124 AHLLNDVTGL-----RDERMVALAARHGVAAVVMHM 154 (294)
T ss_dssp CSEEECSSCS-----CCHHHHHHHHHHTCEEEEECC
T ss_pred CCEEEECCCC-----CChHHHHHHHHhCCCEEEEcC
Confidence 99773 2222 234678888999987777654
No 322
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=91.44 E-value=0.99 Score=41.29 Aligned_cols=120 Identities=19% Similarity=0.203 Sum_probs=73.6
Q ss_pred HHHHHHHHHHcCCCeEEEEeeeCccc-----ccc-----cCC----------HHHHHHcCcCCCCCeeEEEEecC-----
Q 023494 72 LGEQVKAVELAGCDWIHVDVMDGRFV-----PNI-----TIG----------PLVVDALRPVTDLPLDVHLMIVE----- 126 (281)
Q Consensus 72 l~~~l~~l~~~G~d~iHiDImDG~fv-----pn~-----~~G----------~~~I~~ir~~t~~~idaHLmv~d----- 126 (281)
+.++.+.+.++|.|.|++..--|-.+ |+. .+| .++++++|+..+.++-+.|-..+
T Consensus 146 ~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~~g 225 (338)
T 1z41_A 146 FKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDKG 225 (338)
T ss_dssp HHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTTS
T ss_pred HHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCCCC
Confidence 44556677889999988765433111 321 233 67888888866788888765532
Q ss_pred -----hhhHHHHHHHcCCCEEEEccccc-----c-cc-cHHHHHHHHHHc-CCcEEEEECCC-CCHHHHHHhhcc--CCE
Q 023494 127 -----PEQRVPDFIKAGADIVSVHCEQS-----S-TI-HLHRTLNQIKDL-GAKAGVVLNPA-TSLSAIECVLDV--VDL 190 (281)
Q Consensus 127 -----p~~~i~~~~~aGAd~Itvh~Ea~-----~-~~-~i~~~l~~ik~~-G~k~Glai~p~-t~ie~~~~~l~~--vD~ 190 (281)
..++++.+.++|+|++++|.-.. + .. .-.+.++.+|+. ++. +..+-. +..+..++++.. +|.
T Consensus 226 ~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iP--Vi~~Ggi~s~~~a~~~l~~G~aD~ 303 (338)
T 1z41_A 226 LDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMA--TGAVGMITDGSMAEEILQNGRADL 303 (338)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCE--EEECSSCCSHHHHHHHHHTTSCSE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCC--EEEECCCCCHHHHHHHHHcCCceE
Confidence 23456677899999999985310 0 11 123556667664 332 333333 466777787763 999
Q ss_pred EEE
Q 023494 191 VLI 193 (281)
Q Consensus 191 Ilv 193 (281)
|.+
T Consensus 304 V~i 306 (338)
T 1z41_A 304 IFI 306 (338)
T ss_dssp EEE
T ss_pred Eee
Confidence 976
No 323
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=91.35 E-value=1.4 Score=37.58 Aligned_cols=129 Identities=9% Similarity=0.046 Sum_probs=76.0
Q ss_pred eEeEEEec-cCccCHHHHHHHHHHcCCCeEEEE-eeeCc-ccccccCCHHHHHHcCcCCCCCee-EEEEe----cChh--
Q 023494 59 IVSPSILS-ANFAKLGEQVKAVELAGCDWIHVD-VMDGR-FVPNITIGPLVVDALRPVTDLPLD-VHLMI----VEPE-- 128 (281)
Q Consensus 59 ~i~pSila-~D~~~l~~~l~~l~~~G~d~iHiD-ImDG~-fvpn~~~G~~~I~~ir~~t~~~id-aHLmv----~dp~-- 128 (281)
+|+-+.++ ..-..+++.++.+.+.|.+.+++. .-+.. |. -....+.++++-+..++.+. +|.-. .||.
T Consensus 2 klg~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~--~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 79 (278)
T 1i60_A 2 KLCFNEATTLENSNLKLDLELCEKHGYDYIEIRTMDKLPEYL--KDHSLDDLAEYFQTHHIKPLALNALVFFNNRDEKGH 79 (278)
T ss_dssp EEEEEGGGGTTTCCHHHHHHHHHHTTCSEEEEETTTHHHHHT--TSSCHHHHHHHHHTSSCEEEEEEEEECCSSCCHHHH
T ss_pred eeEechhhcccCCCHHHHHHHHHHhCCCEEEEccHHHHHHHh--ccCCHHHHHHHHHHcCCCeeeeccccccccCCHHHH
Confidence 45555555 344689999999999999998885 32211 10 11334444444333455544 55432 2442
Q ss_pred --------hHHHHHHHcCCCEEEEcccccc------------cccHHHHHHHHHHcCCcEEEEECCCC-----CHHHHHH
Q 023494 129 --------QRVPDFIKAGADIVSVHCEQSS------------TIHLHRTLNQIKDLGAKAGVVLNPAT-----SLSAIEC 183 (281)
Q Consensus 129 --------~~i~~~~~aGAd~Itvh~Ea~~------------~~~i~~~l~~ik~~G~k~Glai~p~t-----~ie~~~~ 183 (281)
+.++.+.+.|++.|.+|.-... .+.+.++.+.++++|+++++--.+.+ ..+.+..
T Consensus 80 ~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~ 159 (278)
T 1i60_A 80 NEIITEFKGMMETCKTLGVKYVVAVPLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGVKIALEFVGHPQCTVNTFEQAYE 159 (278)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEECCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCTTBSSCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEEecCCccchhcCHHHHHH
Confidence 2355567889999999843211 01244556666778999888755443 4566667
Q ss_pred hhccCC
Q 023494 184 VLDVVD 189 (281)
Q Consensus 184 ~l~~vD 189 (281)
+++.++
T Consensus 160 l~~~~~ 165 (278)
T 1i60_A 160 IVNTVN 165 (278)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 766543
No 324
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=91.33 E-value=0.2 Score=45.54 Aligned_cols=192 Identities=15% Similarity=0.143 Sum_probs=104.8
Q ss_pred CceEeEEEeccCccCHHHHHHHHHHcCCCeEEEE---e-e--eCcccccc-----cCCHHHHHHcCcCCCCCeeEEE---
Q 023494 57 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVD---V-M--DGRFVPNI-----TIGPLVVDALRPVTDLPLDVHL--- 122 (281)
Q Consensus 57 ~~~i~pSila~D~~~l~~~l~~l~~~G~d~iHiD---I-m--DG~fvpn~-----~~G~~~I~~ir~~t~~~idaHL--- 122 (281)
+.+..|..+..- . -+.++++|.|.+-+- + | =| .|.. ..=...++.|...++.|+.+|+
T Consensus 17 ~~i~~~~a~D~~-----s-A~~~~~aG~~ai~vs~~~~a~~~~G--~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~G 88 (295)
T 1xg4_A 17 NPLQIVGTINAN-----H-ALLAQRAGYQAIYLSGGGVAAGSLG--LPDLGISTLDDVLTDIRRITDVCSLPLLVDADIG 88 (295)
T ss_dssp SSEEEEECSSHH-----H-HHHHHHTTCSCEEECHHHHHHTTTC--CCSSSCSCHHHHHHHHHHHHHHCCSCEEEECTTC
T ss_pred CcEEEecCcCHH-----H-HHHHHHcCCCEEEECchHhhhhhcC--CCCCCCCCHHHHHHHHHHHHhhCCCCEEecCCcc
Confidence 445555554222 1 335566788887662 0 0 01 1221 1122345555555778999988
Q ss_pred EecChh---hHHHHHHHcCCCEEEEccccc-------------ccccHHHHHHHHHHcCCcEEEEECCCCC---------
Q 023494 123 MIVEPE---QRVPDFIKAGADIVSVHCEQS-------------STIHLHRTLNQIKDLGAKAGVVLNPATS--------- 177 (281)
Q Consensus 123 mv~dp~---~~i~~~~~aGAd~Itvh~Ea~-------------~~~~i~~~l~~ik~~G~k~Glai~p~t~--------- 177 (281)
.=.+|. +.+..+.++||..|.+-.-.. +.++..+-|+++++.+...++.++-.|+
T Consensus 89 yg~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ 168 (295)
T 1xg4_A 89 FGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDA 168 (295)
T ss_dssp SSSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHH
T ss_pred cCCCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHH
Confidence 323665 346678899999998753210 1113334566666665444444443333
Q ss_pred -HHHHHHhhcc-CCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeE--EEe-cCCC-hhcHHHHHHcCCcEE
Q 023494 178 -LSAIECVLDV-VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWI--EVD-GGVG-PKNAYKVIEAGANAL 251 (281)
Q Consensus 178 -ie~~~~~l~~-vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I--~VD-GGI~-~e~i~~~~~aGAD~~ 251 (281)
+++.+.|.+. +|.|.+ +|.. ..+.++++.+.++ .|+ .+. ||-+ .-+..++.+.|++.+
T Consensus 169 ai~ra~ay~eAGAd~i~~----e~~~-------~~~~~~~i~~~~~-----iP~~~N~~~~g~~p~~~~~eL~~~G~~~v 232 (295)
T 1xg4_A 169 AIERAQAYVEAGAEMLFP----EAIT-------ELAMYRQFADAVQ-----VPILANITEFGATPLFTTDELRSAHVAMA 232 (295)
T ss_dssp HHHHHHHHHHTTCSEEEE----TTCC-------SHHHHHHHHHHHC-----SCBEEECCSSSSSCCCCHHHHHHTTCSEE
T ss_pred HHHHHHHHHHcCCCEEEE----eCCC-------CHHHHHHHHHHcC-----CCEEEEecccCCCCCCCHHHHHHcCCCEE
Confidence 2334444443 898876 2321 2334455554442 343 233 5555 348899999999999
Q ss_pred EEcccccCCC--CHHHHHHHHHH
Q 023494 252 VAGSAVFGAK--DYAEAIKGIKT 272 (281)
Q Consensus 252 VvGSaIf~a~--dp~~~~~~l~~ 272 (281)
+.|.+.+.+. ...+.++.|++
T Consensus 233 ~~~~~~~~aa~~a~~~~~~~i~~ 255 (295)
T 1xg4_A 233 LYPLSAFRAMNRAAEHVYNVLRQ 255 (295)
T ss_dssp EESSHHHHHHHHHHHHHHHHHHH
T ss_pred EEChHHHHHHHHHHHHHHHHHHH
Confidence 9999888542 22344444444
No 325
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=91.30 E-value=0.99 Score=42.10 Aligned_cols=117 Identities=15% Similarity=0.107 Sum_probs=73.8
Q ss_pred hhHHH---HHHHcCCCEEEEccccc--------ccccHHHHHHHHHH-c--CCcEEEEECCCCCHHHHHHhhccC---CE
Q 023494 128 EQRVP---DFIKAGADIVSVHCEQS--------STIHLHRTLNQIKD-L--GAKAGVVLNPATSLSAIECVLDVV---DL 190 (281)
Q Consensus 128 ~~~i~---~~~~aGAd~Itvh~Ea~--------~~~~i~~~l~~ik~-~--G~k~Glai~p~t~ie~~~~~l~~v---D~ 190 (281)
+.+.+ .+.+.|.+.+=+|.-.. ..+...+.++++|+ . ++.+.+..|.....+...++++.+ +.
T Consensus 150 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~~~~~~~~~e~v~avR~~~g~d~~l~vDan~~~~~~~ai~~~~~l~~~~i 229 (392)
T 3p3b_A 150 ALMQEEAMQGYAKGQRHFKIKVGRGGRHMPLWEGTKRDIAIVRGISEVAGPAGKIMIDANNAYNLNLTKEVLAALSDVNL 229 (392)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCHHHHTSCHHHHHHHHHHHHHHHHHHHCTTCCEEEECTTCCCHHHHHHHHHHTTTSCE
T ss_pred HHHHHHHHHHHHhCCCEEEECcCcCcccCCccccHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCC
Confidence 65544 35678999999885420 01223466777776 3 467788888887877666665542 22
Q ss_pred EEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEEc
Q 023494 191 VLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVAG 254 (281)
Q Consensus 191 IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~VvG 254 (281)
.. ++ |++. ..++-.+++++.+.+++.+++|+.|+ ++ ++.+.++++.| +|++.+=
T Consensus 230 ~~---iE-----~P~~-~d~~~~~~l~~~l~~~g~~iPIa~dE-~~~~~~~~~~i~~~~~d~v~ik 285 (392)
T 3p3b_A 230 YW---LE-----EAFH-EDEALYEDLKEWLGQRGQNVLIADGE-GLASPHLIEWATRGRVDVLQYD 285 (392)
T ss_dssp EE---EE-----CSSS-CCHHHHHHHHHHHHHHTCCCEEEECC-SSCCTTHHHHHHTTSCCEECCB
T ss_pred CE---Ee-----cCCc-ccHHHHHHHHHhhccCCCCccEEecC-CCCHHHHHHHHHcCCCCEEEeC
Confidence 22 22 4443 34555566665533334468999999 86 78999999888 7877653
No 326
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=91.26 E-value=3.1 Score=36.21 Aligned_cols=113 Identities=19% Similarity=0.221 Sum_probs=66.0
Q ss_pred HHHHHHcCCCEEEEccccc-----ccccHHHHHHHHHHc----CCcEEEEECCCCCHHHHHHhhc-----cCCEEEEEee
Q 023494 131 VPDFIKAGADIVSVHCEQS-----STIHLHRTLNQIKDL----GAKAGVVLNPATSLSAIECVLD-----VVDLVLIMSV 196 (281)
Q Consensus 131 i~~~~~aGAd~Itvh~Ea~-----~~~~i~~~l~~ik~~----G~k~Glai~p~t~ie~~~~~l~-----~vD~IlvmsV 196 (281)
++. .+.|||-|-++..-. ..+...+.++.+++. ++|+-+...--| .+.+..... .+|+|=-
T Consensus 73 ~~~-i~~GAdEID~Vinig~~~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~Lt-~eei~~a~~ia~eaGADfVKT--- 147 (226)
T 1vcv_A 73 VSR-LAEVADEIDVVAPIGLVKSRRWAEVRRDLISVVGAAGGRVVKVITEEPYLR-DEERYTLYDIIAEAGAHFIKS--- 147 (226)
T ss_dssp HHH-HTTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCC-HHHHHHHHHHHHHHTCSEEEC---
T ss_pred HHH-HHCCCCEEEEecchhhhcCCCHHHHHHHHHHHHHHHcCCCceEEEeccCCC-HHHHHHHHHHHHHcCCCEEEe---
Confidence 556 889999998886421 112234444444443 334444332223 233333322 3798842
Q ss_pred cCCCC--------CCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHc---CCc
Q 023494 197 NPGFG--------GQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEA---GAN 249 (281)
Q Consensus 197 ~pG~~--------GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~a---GAD 249 (281)
..||. |+ -...+++.++-+++.+...+.++.|-+.|||+ .+++..++++ ||+
T Consensus 148 STGf~~~~~~~~~~~-~~gAt~~dv~lm~~~i~~~g~~v~vKaaGGirt~~~al~~i~a~~~Ga~ 211 (226)
T 1vcv_A 148 STGFAEEAYAARQGN-PVHSTPERAAAIARYIKEKGYRLGVKMAGGIRTREQAKAIVDAIGWGED 211 (226)
T ss_dssp CCSCCCHHHHHHTTC-CSSCCHHHHHHHHHHHHHHTCCCEEEEESSCCSHHHHHHHHHHHCSCSC
T ss_pred CCCCCccccccccCC-CCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHCCCC
Confidence 34554 00 01245666666666654445568899999999 8899999999 998
No 327
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=91.24 E-value=0.15 Score=45.99 Aligned_cols=134 Identities=10% Similarity=0.006 Sum_probs=82.8
Q ss_pred CceEeEEEeccCccCHHHHHHHHHHcCCC---eEEEEeeeCcccccc----cCC------HHHHHHcCcCCCCCeeEEEE
Q 023494 57 DIIVSPSILSANFAKLGEQVKAVELAGCD---WIHVDVMDGRFVPNI----TIG------PLVVDALRPVTDLPLDVHLM 123 (281)
Q Consensus 57 ~~~i~pSila~D~~~l~~~l~~l~~~G~d---~iHiDImDG~fvpn~----~~G------~~~I~~ir~~t~~~idaHLm 123 (281)
...+..+|...+..++.+.++.+.++|+| .+++.+- .|+. .+| .++++++|+.++.|+.+-+-
T Consensus 93 ~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~----~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~~ 168 (314)
T 2e6f_A 93 KKPLFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLS----CPNVPGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKMP 168 (314)
T ss_dssp TCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECC----CCCSTTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEEC
T ss_pred CCcEEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcC----CCCCCCchhhcCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 34577888887888888999999999999 8988653 2332 222 45788888766788877443
Q ss_pred ec-Chh---hHHHHHHHcC-CCEEEEcccc----------c-------------cc----ccHHHHHHHHHHcC-CcEEE
Q 023494 124 IV-EPE---QRVPDFIKAG-ADIVSVHCEQ----------S-------------ST----IHLHRTLNQIKDLG-AKAGV 170 (281)
Q Consensus 124 v~-dp~---~~i~~~~~aG-Ad~Itvh~Ea----------~-------------~~----~~i~~~l~~ik~~G-~k~Gl 170 (281)
.. ++. ++.+.+.++| +|+|++|.-. . +. ....+.++.+++.- -..-+
T Consensus 169 ~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi 248 (314)
T 2e6f_A 169 PYFDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVF 248 (314)
T ss_dssp CCCCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEE
T ss_pred CCCCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEE
Confidence 32 222 2356678999 9999988521 0 00 01136677777652 22223
Q ss_pred EECCCCCHHHHHHhhc-cCCEEEEE
Q 023494 171 VLNPATSLSAIECVLD-VVDLVLIM 194 (281)
Q Consensus 171 ai~p~t~ie~~~~~l~-~vD~Ilvm 194 (281)
+..-=...+.+.+++. .+|.|.+.
T Consensus 249 ~~GGI~~~~da~~~l~~GAd~V~ig 273 (314)
T 2e6f_A 249 GCGGVYSGEDAFLHILAGASMVQVG 273 (314)
T ss_dssp EESSCCSHHHHHHHHHHTCSSEEEC
T ss_pred EECCCCCHHHHHHHHHcCCCEEEEc
Confidence 3322234555555543 58998764
No 328
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=91.17 E-value=0.74 Score=39.95 Aligned_cols=127 Identities=11% Similarity=-0.051 Sum_probs=77.4
Q ss_pred eEeEEEeccCc--cCHHHHHHHHHHcCCCeEEEEeeeCcccccc-cCCHHHHHHcCc---CCCCCeeEEEEe-c--Chh-
Q 023494 59 IVSPSILSANF--AKLGEQVKAVELAGCDWIHVDVMDGRFVPNI-TIGPLVVDALRP---VTDLPLDVHLMI-V--EPE- 128 (281)
Q Consensus 59 ~i~pSila~D~--~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~-~~G~~~I~~ir~---~t~~~idaHLmv-~--dp~- 128 (281)
+|+-|.++..- ..+++.++.+.+.|.+.+++..- +.+.+ ......++++|+ ..++.+.++--. . +|.
T Consensus 2 klg~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~---~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~ 78 (286)
T 3dx5_A 2 KYSLCTISFRHQLISFTDIVQFAYENGFEGIELWGT---HAQNLYMQEYETTERELNCLKDKTLEITMISDYLDISLSAD 78 (286)
T ss_dssp EEEEEGGGGTTSCCCHHHHHHHHHHTTCCEEEEEHH---HHHHHHHHCHHHHHHHHHHTGGGTCCEEEEECCCCCSTTSC
T ss_pred eEEEEeeeccCCCCCHHHHHHHHHHhCCCEEEEccc---ccccccccCHHHHHHHHHHHHHcCCeEEEEecCCCCCCchh
Confidence 56667777654 68999999999999999887421 11111 122334444433 246666654211 1 221
Q ss_pred ---------hHHHHHHHcCCCEEEEcccccc------------cccHHHHHHHHHHcCCcEEEEECCCC---CHHHHHHh
Q 023494 129 ---------QRVPDFIKAGADIVSVHCEQSS------------TIHLHRTLNQIKDLGAKAGVVLNPAT---SLSAIECV 184 (281)
Q Consensus 129 ---------~~i~~~~~aGAd~Itvh~Ea~~------------~~~i~~~l~~ik~~G~k~Glai~p~t---~ie~~~~~ 184 (281)
+.++.+.+.|+..|.+|.-... .+.+.++.+.++++|+++++--.+.+ ..+.+..+
T Consensus 79 ~~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~l 158 (286)
T 3dx5_A 79 FEKTIEKCEQLAILANWFKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLLETHPNTLTDTLPSTLEL 158 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCTTSTTSSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEEecCCCcCcCCHHHHHHH
Confidence 2455667889999999853211 12355667778889999998866553 34556666
Q ss_pred hccC
Q 023494 185 LDVV 188 (281)
Q Consensus 185 l~~v 188 (281)
++.+
T Consensus 159 ~~~~ 162 (286)
T 3dx5_A 159 LGEV 162 (286)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 6654
No 329
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=91.12 E-value=2.3 Score=38.80 Aligned_cols=119 Identities=15% Similarity=0.074 Sum_probs=69.8
Q ss_pred HHHHHHHHcC--CCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEE--ccccc
Q 023494 74 EQVKAVELAG--CDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSV--HCEQS 149 (281)
Q Consensus 74 ~~l~~l~~~G--~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itv--h~Ea~ 149 (281)
+.++.+.+.| ++++++|...|. ...-.+.++++|+.++.++.+.=-+.++ +..+.+.++|||.|.+ |.-..
T Consensus 109 ~~a~~~~~~g~~~~~i~i~~~~G~----~~~~~~~i~~lr~~~~~~~vi~G~v~s~-e~A~~a~~aGad~Ivvs~hgG~~ 183 (336)
T 1ypf_A 109 EFVQQLAAEHLTPEYITIDIAHGH----SNAVINMIQHIKKHLPESFVIAGNVGTP-EAVRELENAGADATKVGIGPGKV 183 (336)
T ss_dssp HHHHHHHHTTCCCSEEEEECSSCC----SHHHHHHHHHHHHHCTTSEEEEEEECSH-HHHHHHHHHTCSEEEECSSCSTT
T ss_pred HHHHHHHhcCCCCCEEEEECCCCC----cHHHHHHHHHHHHhCCCCEEEECCcCCH-HHHHHHHHcCCCEEEEecCCCce
Confidence 4467778888 999998864431 1233567888888765444443334554 3677889999999999 54210
Q ss_pred ---------cccc-HHHHHHHHHHc-CCcEEEEECCCCCHHHHHHhhccCCEEEEEeec
Q 023494 150 ---------STIH-LHRTLNQIKDL-GAKAGVVLNPATSLSAIECVLDVVDLVLIMSVN 197 (281)
Q Consensus 150 ---------~~~~-i~~~l~~ik~~-G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~ 197 (281)
.... ....+.++++. ++.+..+=.-.++.+..+.+.-.+|.|.+-+..
T Consensus 184 ~~~~~~~~~g~~g~~~~~l~~v~~~~~ipVIa~GGI~~g~Dv~kalalGAdaV~iGr~~ 242 (336)
T 1ypf_A 184 CITKIKTGFGTGGWQLAALRWCAKAASKPIIADGGIRTNGDVAKSIRFGATMVMIGSLF 242 (336)
T ss_dssp CHHHHHHSCSSTTCHHHHHHHHHHTCSSCEEEESCCCSTHHHHHHHHTTCSEEEESGGG
T ss_pred eecccccCcCCchhHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCCEEEeChhh
Confidence 0000 23445555544 444443212234555555555569999875443
No 330
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=91.04 E-value=1.6 Score=38.54 Aligned_cols=147 Identities=20% Similarity=0.217 Sum_probs=76.6
Q ss_pred CCeeEEEEecCh--hh---HHHHHHHcCCCEEEEccccc-c---cccH-----------------HHHHHHHHHc--CCc
Q 023494 116 LPLDVHLMIVEP--EQ---RVPDFIKAGADIVSVHCEQS-S---TIHL-----------------HRTLNQIKDL--GAK 167 (281)
Q Consensus 116 ~~idaHLmv~dp--~~---~i~~~~~aGAd~Itvh~Ea~-~---~~~i-----------------~~~l~~ik~~--G~k 167 (281)
..+..+++.-|| .. +++.+.++|+|++.+..-.. + ...+ .+.++.+|+. .+.
T Consensus 17 ~~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~P 96 (268)
T 1qop_A 17 GAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIP 96 (268)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSC
T ss_pred ceEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCC
Confidence 457778888888 33 45567789999999986221 0 0112 2668888877 456
Q ss_pred EEEEE--CC--CCCHHH-HHHhhc-cCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHH
Q 023494 168 AGVVL--NP--ATSLSA-IECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAY 241 (281)
Q Consensus 168 ~Glai--~p--~t~ie~-~~~~l~-~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~ 241 (281)
+++.. || .++.+. ++.+.+ .+|.|++... .. +.+.++.+.+.+++...-..+.-.-+.+.+.
T Consensus 97 v~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~d~----~~--------e~~~~~~~~~~~~g~~~i~l~~p~t~~~~i~ 164 (268)
T 1qop_A 97 IGLLMYANLVFNNGIDAFYARCEQVGVDSVLVADV----PV--------EESAPFRQAALRHNIAPIFICPPNADDDLLR 164 (268)
T ss_dssp EEEEECHHHHHTTCHHHHHHHHHHHTCCEEEETTC----CG--------GGCHHHHHHHHHTTCEEECEECTTCCHHHHH
T ss_pred EEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEcCC----CH--------HHHHHHHHHHHHcCCcEEEEECCCCCHHHHH
Confidence 66543 32 123333 333332 4787776311 11 2233344444444432222234444556777
Q ss_pred HHHHcCCcEEEEcc--cccCC-----CCHHHHHHHHHHhc
Q 023494 242 KVIEAGANALVAGS--AVFGA-----KDYAEAIKGIKTSK 274 (281)
Q Consensus 242 ~~~~aGAD~~VvGS--aIf~a-----~dp~~~~~~l~~~~ 274 (281)
.+.+.+.+.+.+.| ..++. ++..+.++++++..
T Consensus 165 ~i~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~ 204 (268)
T 1qop_A 165 QVASYGRGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYH 204 (268)
T ss_dssp HHHHHCCSCEEEESSSSCCCSSSCC--CCHHHHHHHHHTT
T ss_pred HHHhhCCCcEEEEecCCcCCCccCCCchHHHHHHHHHhcc
Confidence 77777664443322 23332 22346667777654
No 331
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=91.01 E-value=2.7 Score=38.21 Aligned_cols=123 Identities=12% Similarity=0.086 Sum_probs=78.3
Q ss_pred CeeEEEEecChhhHHH---HHHHcCCCEEEEcccccccccHHHHHHHHHHcC--CcEEEEECCCCCHHHHHHhhcc----
Q 023494 117 PLDVHLMIVEPEQRVP---DFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLG--AKAGVVLNPATSLSAIECVLDV---- 187 (281)
Q Consensus 117 ~idaHLmv~dp~~~i~---~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G--~k~Glai~p~t~ie~~~~~l~~---- 187 (281)
+....+-..+|+.+.+ .+.+.|.+.+=+|.-. +.++-.+.++++|+.| +.+.+..|.....+....+++.
T Consensus 130 ~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~-~~~~d~~~v~avr~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~ 208 (345)
T 2zad_A 130 ETDKTVGIDTVENRVKEAKKIFEEGFRVIKIKVGE-NLKEDIEAVEEIAKVTRGAKYIVDANMGYTQKEAVEFARAVYQK 208 (345)
T ss_dssp EBCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCS-CHHHHHHHHHHHHHHSTTCEEEEECTTCSCHHHHHHHHHHHHHT
T ss_pred eeeEEecCCCHHHHHHHHHHHHHcCcCEEEEeecC-CHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHHHHHHHhc
Confidence 3333333357776654 3467899999998643 1233345677788765 5566677777777665555432
Q ss_pred -CCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEE
Q 023494 188 -VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVA 253 (281)
Q Consensus 188 -vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~Vv 253 (281)
++ .|+-.|++.+..++-.+++++.. +++|..|+.+. ++.+..+++.| +|++.+
T Consensus 209 ~i~--------~~~iE~P~~~~~~~~~~~l~~~~-----~ipia~dE~~~~~~~~~~~i~~~~~d~v~i 264 (345)
T 2zad_A 209 GID--------IAVYEQPVRREDIEGLKFVRFHS-----PFPVAADESARTKFDVMRLVKEEAVDYVNI 264 (345)
T ss_dssp TCC--------CSEEECCSCTTCHHHHHHHHHHS-----SSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CCC--------eeeeeCCCCcccHHHHHHHHHhC-----CCCEEEeCCcCCHHHHHHHHHhCCCCEEEE
Confidence 33 11223666665566666666543 47899999986 77888887776 788876
No 332
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=91.01 E-value=1.6 Score=40.66 Aligned_cols=110 Identities=16% Similarity=0.143 Sum_probs=67.0
Q ss_pred HHHHHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCC-CHHHHHHhhc-cCCEEEEEeecCCCCCCccch
Q 023494 130 RVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPAT-SLSAIECVLD-VVDLVLIMSVNPGFGGQSFIE 207 (281)
Q Consensus 130 ~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t-~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f~~ 207 (281)
+...+.++|. .-.+|.. .++++..+.+++....++..+.... ..+.++.+.+ .+|+|.+-+ ..|. .+
T Consensus 58 lA~A~a~~Gg-~gvi~~~----~s~ee~~~~i~~~~~~~~~~~g~~~~~~e~~~~a~~aGvdvI~id~-a~G~-----~~ 126 (361)
T 3r2g_A 58 MANFMHSKGA-MGALHRF----MTIEENIQEFKKCKGPVFVSVGCTENELQRAEALRDAGADFFCVDV-AHAH-----AK 126 (361)
T ss_dssp HHHHHHHTTC-EEBCCSC----SCHHHHHHHHHTCCSCCBEEECSSHHHHHHHHHHHHTTCCEEEEEC-SCCS-----SH
T ss_pred HHHHHHHcCC-CEEEeCC----CCHHHHHHHHhhcceEEEEEcCCCHHHHHHHHHHHHcCCCEEEEeC-CCCC-----cH
Confidence 4445567774 3334432 3477778888876656666664322 2344554444 488665422 2232 23
Q ss_pred hHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEc
Q 023494 208 SQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAG 254 (281)
Q Consensus 208 ~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvG 254 (281)
..++.|+++|+..+ +.+|.+-+-.+++.+..+.++|||.+++|
T Consensus 127 ~~~e~I~~ir~~~~----~~~Vi~G~V~T~e~A~~a~~aGaD~I~Vg 169 (361)
T 3r2g_A 127 YVGKTLKSLRQLLG----SRCIMAGNVATYAGADYLASCGADIIKAG 169 (361)
T ss_dssp HHHHHHHHHHHHHT----TCEEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred hHHHHHHHHHHhcC----CCeEEEcCcCCHHHHHHHHHcCCCEEEEc
Confidence 45667777777653 25664423456999999999999999995
No 333
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=90.95 E-value=0.3 Score=47.63 Aligned_cols=139 Identities=12% Similarity=0.112 Sum_probs=84.6
Q ss_pred HHHHHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEE--EECCCCCHHHHHHhhccCCEEEEEeecCCCC-CCccc
Q 023494 130 RVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGV--VLNPATSLSAIECVLDVVDLVLIMSVNPGFG-GQSFI 206 (281)
Q Consensus 130 ~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Gl--ai~p~t~ie~~~~~l~~vD~IlvmsV~pG~~-GQ~f~ 206 (281)
.++...+.|+|+|.+..-. +.+++.++.+.+.+.|..+.+ -|....-++.+.+++..+|.|++-..+-|.. |-
T Consensus 198 DI~~~l~~g~d~I~lpfV~-saeDv~~~~~~l~~~~~~i~IiakIEt~eav~nldeI~~~~DgImvgrgDLgvelg~--- 273 (500)
T 1a3w_A 198 DLRFGVKNGVHMVFASFIR-TANDVLTIREVLGEQGKDVKIIVKIENQQGVNNFDEILKVTDGVMVARGDLGIEIPA--- 273 (500)
T ss_dssp HHHHHHHHTCSEEEECSCC-SHHHHHHHHHHHHHHHTTSEEEEEECSSHHHHSHHHHHHHSSEEEECHHHHHHHTTG---
T ss_pred HHHHHHHcCCCEEEECCCC-CHHHHHHHHHHHHhcCCCcEEEEEECChHHHHhHHHHHHhCCEEEECchHhhhhcCc---
Confidence 4667789999999999654 356677777777666544444 4543344567888887789887742221110 11
Q ss_pred hhHHHHHHHHHHHhhhcCCCCeEEE--------ecCCChh-----cHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHh
Q 023494 207 ESQVKKISDLRRMCLEKGVNPWIEV--------DGGVGPK-----NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTS 273 (281)
Q Consensus 207 ~~~l~kI~~lr~l~~~~~~~~~I~V--------DGGI~~e-----~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~ 273 (281)
++...-.+++....+..| .++.+ --.-++. .+...+..|+|.+.+++.--.-.-|.++++.|.+.
T Consensus 274 ~~v~~aqk~ii~aaraaG--kpvi~ATQMLeSMi~~~~ptraEvsdva~av~~G~d~vmLs~eta~G~yPveaV~~m~~I 351 (500)
T 1a3w_A 274 PEVLAVQKKLIAKSNLAG--KPVICATQMLESMTYNPRPTRAEVSDVGNAILDGADCVMLSGETAKGNYPINAVTTMAET 351 (500)
T ss_dssp GGHHHHHHHHHHHHHHHT--CCEEECSSTTGGGGSCSSCCHHHHHHHHHHHHHTCSEECBSTTTTTCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC--CCEEEEeehhhhhccCCCchHHHHHHHHHHHHhCCCEEEecchhhcchhHHHHHHHHHHH
Confidence 223223333333333333 34433 1223344 55677888999999997765557788888887764
Q ss_pred c
Q 023494 274 K 274 (281)
Q Consensus 274 ~ 274 (281)
+
T Consensus 352 ~ 352 (500)
T 1a3w_A 352 A 352 (500)
T ss_dssp H
T ss_pred H
Confidence 4
No 334
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=90.82 E-value=2.9 Score=38.31 Aligned_cols=115 Identities=14% Similarity=0.153 Sum_probs=77.0
Q ss_pred cChhhHHH---HHHH-cCCCEEEEcccccccccHHHHHHHHHH-cC--CcEEEEECCCCCHHHHHHhhcc-----CCEEE
Q 023494 125 VEPEQRVP---DFIK-AGADIVSVHCEQSSTIHLHRTLNQIKD-LG--AKAGVVLNPATSLSAIECVLDV-----VDLVL 192 (281)
Q Consensus 125 ~dp~~~i~---~~~~-aGAd~Itvh~Ea~~~~~i~~~l~~ik~-~G--~k~Glai~p~t~ie~~~~~l~~-----vD~Il 192 (281)
.+|+.+++ .+.+ .|.+.+=+|.-..+.+...+.++++|+ .| +.+.+..|.....+...++++. +++|
T Consensus 141 ~~~e~~~~~a~~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i- 219 (370)
T 1nu5_A 141 GDTARDIDSALEMIETRRHNRFKVKLGARTPAQDLEHIRSIVKAVGDRASVRVDVNQGWDEQTASIWIPRLEEAGVELV- 219 (370)
T ss_dssp SCHHHHHHHHHHHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHHHGGGCEEEEECTTCCCHHHHHHHHHHHHHHTCCEE-
T ss_pred CCHHHHHHHHHHHHHhCCccEEEEecCCCChHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCcceE-
Confidence 57776654 3456 899999998653112334467777776 34 6777888877777665555432 4444
Q ss_pred EEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEEc
Q 023494 193 IMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVAG 254 (281)
Q Consensus 193 vmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~VvG 254 (281)
.|++.+..++-.+++++.. +++|..|+.++ .+.+.++++.| +|++.+-
T Consensus 220 ---------EqP~~~~~~~~~~~l~~~~-----~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik 269 (370)
T 1nu5_A 220 ---------EQPVPRANFGALRRLTEQN-----GVAILADESLSSLSSAFELARDHAVDAFSLK 269 (370)
T ss_dssp ---------ECCSCTTCHHHHHHHHHHC-----SSEEEESTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred ---------eCCCCcccHHHHHHHHHhC-----CCCEEeCCCCCCHHHHHHHHHhCCCCEEEEc
Confidence 2556555666666666543 47999999986 77888888776 7888774
No 335
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=90.77 E-value=0.95 Score=42.07 Aligned_cols=114 Identities=8% Similarity=-0.008 Sum_probs=77.0
Q ss_pred cChhhHHH---HHHHcCCCEEEEcccccccccHHHHHHHHHH-c--CCcEEEEECCCCCHHHHHHhhcc-----CCEEEE
Q 023494 125 VEPEQRVP---DFIKAGADIVSVHCEQSSTIHLHRTLNQIKD-L--GAKAGVVLNPATSLSAIECVLDV-----VDLVLI 193 (281)
Q Consensus 125 ~dp~~~i~---~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~-~--G~k~Glai~p~t~ie~~~~~l~~-----vD~Ilv 193 (281)
.+|+.+.+ .+.+.|.+.+=+|.-...... .+.++++|+ . ++.+.+..|.....+...++++. +++|
T Consensus 163 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~-~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i-- 239 (388)
T 2nql_A 163 RTLKARGELAKYWQDRGFNAFKFATPVADDGP-AAEIANLRQVLGPQAKIAADMHWNQTPERALELIAEMQPFDPWFA-- 239 (388)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEEGGGCTTCH-HHHHHHHHHHHCTTSEEEEECCSCSCHHHHHHHHHHHGGGCCSCE--
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEeCCCCChHH-HHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCEE--
Confidence 47776654 456789999999854211345 678888887 3 46788888877777665555432 4444
Q ss_pred EeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEEc
Q 023494 194 MSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVAG 254 (281)
Q Consensus 194 msV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~VvG 254 (281)
.|++.+..++-.+++++. .+++|..|+.+. ++.+.++++.| +|++.+-
T Consensus 240 --------EqP~~~~d~~~~~~l~~~-----~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik 289 (388)
T 2nql_A 240 --------EAPVWTEDIAGLEKVSKN-----TDVPIAVGEEWRTHWDMRARIERCRIAIVQPE 289 (388)
T ss_dssp --------ECCSCTTCHHHHHHHHTS-----CCSCEEECTTCCSHHHHHHHHTTSCCSEECCC
T ss_pred --------ECCCChhhHHHHHHHHhh-----CCCCEEEeCCcCCHHHHHHHHHcCCCCEEEec
Confidence 245555555555555543 358999999996 78888888776 7888764
No 336
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=90.71 E-value=5.2 Score=35.61 Aligned_cols=112 Identities=14% Similarity=0.178 Sum_probs=66.9
Q ss_pred HHHHHHcCCCEEEEccccc-----ccccHHHHHHHHHHc--CCcEEEEECCC-CCHHHHHHhhc-----cCCEEEEEeec
Q 023494 131 VPDFIKAGADIVSVHCEQS-----STIHLHRTLNQIKDL--GAKAGVVLNPA-TSLSAIECVLD-----VVDLVLIMSVN 197 (281)
Q Consensus 131 i~~~~~aGAd~Itvh~Ea~-----~~~~i~~~l~~ik~~--G~k~Glai~p~-t~ie~~~~~l~-----~vD~IlvmsV~ 197 (281)
.+.+.+.|||-|-++..-. ..+.+.+.++.+++. |..+=+.+... -..+.+..... .+|+|=- .
T Consensus 117 a~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKT---S 193 (260)
T 3r12_A 117 AIFAVESGADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYLDTEEKIAACVISKLAGAHFVKT---S 193 (260)
T ss_dssp HHHHHHHTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEEC---C
T ss_pred HHHHHHcCCCEEEEEeehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCCCCHHHHHHHHHHHHHhCcCEEEc---C
Confidence 5567889999999986531 112344455555554 33332333222 11233333221 3798842 2
Q ss_pred CCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEE
Q 023494 198 PGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANAL 251 (281)
Q Consensus 198 pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~ 251 (281)
.||+. ...+++.++.+++... ..+.|-+.|||+ .+++..++++||+-+
T Consensus 194 TGf~~---~GAT~edV~lm~~~vg---~~v~VKaAGGIrt~~~al~mi~aGA~Ri 242 (260)
T 3r12_A 194 TGFGT---GGATAEDVHLMKWIVG---DEMGVKASGGIRTFEDAVKMIMYGADRI 242 (260)
T ss_dssp CSSSS---CCCCHHHHHHHHHHHC---TTSEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred CCCCC---CCCCHHHHHHHHHHhC---CCceEEEeCCCCCHHHHHHHHHcCCcee
Confidence 45542 1245667777777663 357899999999 789999999999954
No 337
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=90.68 E-value=4.8 Score=34.67 Aligned_cols=29 Identities=17% Similarity=0.068 Sum_probs=22.7
Q ss_pred ccCHHHHHHHHHHcCCCeEEEEee---eCccc
Q 023494 69 FAKLGEQVKAVELAGCDWIHVDVM---DGRFV 97 (281)
Q Consensus 69 ~~~l~~~l~~l~~~G~d~iHiDIm---DG~fv 97 (281)
+-|...+++.+.+.|+|++++||. ||..|
T Consensus 20 pENTl~Af~~A~~~G~d~iE~DV~lT~Dg~~V 51 (238)
T 3no3_A 20 AQNSIRSLERASEIGAYGSEFDVHLTADNVLV 51 (238)
T ss_dssp CTTSHHHHHHHHHTTCSEEEEEEEECTTSCEE
T ss_pred CccHHHHHHHHHHcCCCEEEEEeeEccCCcEE
Confidence 346677888888999999999975 67544
No 338
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=90.48 E-value=2.6 Score=38.83 Aligned_cols=115 Identities=12% Similarity=0.052 Sum_probs=76.7
Q ss_pred cChhhHHH---HHHHcCCCEEEEccccc------ccccHHHHHHHHHH-c--CCcEEEEECCCCCHHHHHHhhcc-----
Q 023494 125 VEPEQRVP---DFIKAGADIVSVHCEQS------STIHLHRTLNQIKD-L--GAKAGVVLNPATSLSAIECVLDV----- 187 (281)
Q Consensus 125 ~dp~~~i~---~~~~aGAd~Itvh~Ea~------~~~~i~~~l~~ik~-~--G~k~Glai~p~t~ie~~~~~l~~----- 187 (281)
.+|+.+.+ .+.+.|.+.+=+|.-.. ......+.++++|+ . ++.+.+..|.....+...++++.
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~ 227 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAVGPDIRLMIDAFHWYSRTDALALGRGLEKLG 227 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHHCTTSEEEEECCTTCCHHHHHHHHHHHHTTT
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcC
Confidence 57776654 35678999999986420 12334567777777 3 46778888877777665555432
Q ss_pred CCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC--hhcHHHHHHcC-CcEEEEc
Q 023494 188 VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG--PKNAYKVIEAG-ANALVAG 254 (281)
Q Consensus 188 vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~--~e~i~~~~~aG-AD~~VvG 254 (281)
+++| .|++.+..++-.+++++.. +++|..|+.+. ++.+..+++.| +|++.+-
T Consensus 228 i~~i----------E~P~~~~~~~~~~~l~~~~-----~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~ik 282 (382)
T 1rvk_A 228 FDWI----------EEPMDEQSLSSYKWLSDNL-----DIPVVGPESAAGKHWHRAEWIKAGACDILRTG 282 (382)
T ss_dssp CSEE----------ECCSCTTCHHHHHHHHHHC-----SSCEEECSSCSSHHHHHHHHHHTTCCSEEEEC
T ss_pred CCEE----------eCCCChhhHHHHHHHHhhC-----CCCEEEeCCccCcHHHHHHHHHcCCCCEEeeC
Confidence 3443 2555555566666666543 47999999986 47888888776 7988774
No 339
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=90.34 E-value=1.1 Score=38.36 Aligned_cols=116 Identities=19% Similarity=0.211 Sum_probs=69.7
Q ss_pred cCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCC-CCCeeEEEEe-------cChh----------
Q 023494 67 ANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMI-------VEPE---------- 128 (281)
Q Consensus 67 ~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t-~~~idaHLmv-------~dp~---------- 128 (281)
+...++++.++.+.+.|.+ +++ ..++ +.+... ..++++++.. + .+.+|.-. .||.
T Consensus 7 ~p~~~l~~~l~~~~~~G~~-vEl-~~~~---~~~~~~-~~~~~~~~~~~~-~~~~h~~~~~~~l~~~~~~~r~~~~~~~~ 79 (254)
T 3ayv_A 7 FPLSRAEEALPRLQALGLG-AEV-YLDP---ALLEED-ALFQSLRRRFSG-KLSVHLPFWNLDLLSPDPEVRGLTLRRLL 79 (254)
T ss_dssp EEGGGHHHHHHHHHHHTCE-EEE-ECCG---GGTTCH-HHHHHHHHHCCS-CEEEECCCTTCCTTCSSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCC-EEE-eccc---cccCcH-HHHHHHHHHhCC-CeEEecCccCCCCCCCCHHHHHHHHHHHH
Confidence 3456889999999999999 887 3332 211111 1455554433 4 56666432 1332
Q ss_pred hHHHHHHHcCCCEEEEccccccc--------------ccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCC
Q 023494 129 QRVPDFIKAGADIVSVHCEQSST--------------IHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVD 189 (281)
Q Consensus 129 ~~i~~~~~aGAd~Itvh~Ea~~~--------------~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD 189 (281)
+.++.+.+.|+..|.+|.-.... +.+.++.+.++++|+++++--.+.+..+.+..+++.++
T Consensus 80 ~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~l~~~v~ 154 (254)
T 3ayv_A 80 FGLDRAAELGADRAVFHSGIPHGRTPEEALERALPLAEALGLVVRRARTLGVRLLLENSHEPHPEALRPVLEAHA 154 (254)
T ss_dssp HHHHHHHHTTCSEEEEECCCCTTCCHHHHHHTHHHHHHHTHHHHHHHHHHTCEEEEECSSCSSGGGTHHHHHHHT
T ss_pred HHHHHHHHhCCCEEEECCCCCcccccccHHHHHHHHHHHHHHHHHHHhhcCCEEEEcCCCCCCHHHHHHHHHhcC
Confidence 23556678999999998432111 12345566677889999887655555555666666554
No 340
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=90.31 E-value=7 Score=37.42 Aligned_cols=198 Identities=16% Similarity=0.118 Sum_probs=114.9
Q ss_pred EeEEEeccCccCHHHHHHHHHHcCCCeEEEEeee------Ccccccc-cCCHHHHHHcCcCCCCC---eeEEEEecCh--
Q 023494 60 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMD------GRFVPNI-TIGPLVVDALRPVTDLP---LDVHLMIVEP-- 127 (281)
Q Consensus 60 i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImD------G~fvpn~-~~G~~~I~~ir~~t~~~---idaHLmv~dp-- 127 (281)
=.+|+-+.++.-++-.++.+++.+...| +.+-. |+|+.-. ..-..+++.+-+..+.| +.+||==-.|
T Consensus 22 gi~av~~~n~e~i~Ail~aAee~~sPVI-Ie~t~~qv~~~gGYtG~~p~~f~~~V~~~A~~~~vPv~pV~LhlDHg~~~~ 100 (450)
T 3txv_A 22 GIPSICSAHPLVIEAAMLRAHREKAPVL-IEATCNQVNQDGGYTGMTPEDFTRFVGAIADRIEFPREKILLGGDHLGPNP 100 (450)
T ss_dssp CEEEECCCCHHHHHHHHHHHHHSCSCEE-EEEETTTSCTTCTTTTCCHHHHHHHHHHHHHHTTCCGGGEEEEEEEESSGG
T ss_pred EEEEeCcCCHHHHHHHHHHHHHhCCCEE-EEcChhhHhhcCCCCCCCHHHHHHHHHHHHHHcCcCcccEEEECCCCCCcc
Confidence 3467777788888888899998877765 44443 2333100 00123344443334566 5777655444
Q ss_pred -------------hhHHHHHHHcCCCEEEEcccccc----cc--------cHHHHHHHHHHcCCcE-----EEEECC---
Q 023494 128 -------------EQRVPDFIKAGADIVSVHCEQSS----TI--------HLHRTLNQIKDLGAKA-----GVVLNP--- 174 (281)
Q Consensus 128 -------------~~~i~~~~~aGAd~Itvh~Ea~~----~~--------~i~~~l~~ik~~G~k~-----Glai~p--- 174 (281)
.+.+..++++|...|.+=+-..+ .. ...++++.+++.+... +-.+..
T Consensus 101 w~~~~~~~am~~a~e~i~~aI~AGFtSVMiD~S~~p~eeNi~lt~evva~rtaeL~~~A~~~~~~~g~~e~~yviGtEvp 180 (450)
T 3txv_A 101 WKHLPADEAMAKAEAMITAYAKAGFTKLHLDTSMGCAGEPTALPDATTAARAARLAAVAEDAVGGRGGVLPVYIIGTEVP 180 (450)
T ss_dssp GTTSCHHHHHHHHHHHHHHHHTTTCCEEEECCCBCCSSSCSBCCHHHHHHHHHHHHHHHHHTC------CCEEEEECC--
T ss_pred cccccHHHHHHHHHHHHHHHHHcCCCEEEECCCCCchhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeeeecC
Confidence 45788899999888776543211 11 1234457777754443 222222
Q ss_pred -------------CCCHHHHHHhhcc---------CC----EEEEEeecCCCC-CCccc-hhHHHHHHHHHHHhhhcCCC
Q 023494 175 -------------ATSLSAIECVLDV---------VD----LVLIMSVNPGFG-GQSFI-ESQVKKISDLRRMCLEKGVN 226 (281)
Q Consensus 175 -------------~t~ie~~~~~l~~---------vD----~IlvmsV~pG~~-GQ~f~-~~~l~kI~~lr~l~~~~~~~ 226 (281)
-|+.+..+++++. +| .+.-+-|.||.. |.... ..-.+++++|++.+++. .+
T Consensus 181 vpGGa~~~~~~~~~T~PeeA~~fv~~~~~~f~~~gld~~w~~v~~lvVqpGt~f~~~~v~~y~~e~~~~L~~~v~~~-P~ 259 (450)
T 3txv_A 181 IPGGALEELDTLEVTAPEAAIETVRVHRAAFEEAGAAGAFSRVVGAVVQPGVEFGNENVIAYDRARAEKLSATLGQL-HG 259 (450)
T ss_dssp -----------CCCCCHHHHHHHHHHHHHHHHHHTCHHHHTTEEEEECCCSCEECSSCEECCCTTTTSHHHHGGGTS-TT
T ss_pred CCCccccccccCCCCCHHHHHHHHHHHHHHHHHhCcccccCceeEEEecCCcccCCCCCCCCCHHHHHHHHHHhccC-CC
Confidence 2556666666542 32 233346788863 33322 22355777777776431 11
Q ss_pred CeEEEec--CCChhcHHHHHHcCCcEEEEcccccC
Q 023494 227 PWIEVDG--GVGPKNAYKVIEAGANALVAGSAVFG 259 (281)
Q Consensus 227 ~~I~VDG--GI~~e~i~~~~~aGAD~~VvGSaIf~ 259 (281)
+-+.--. |++.++++++++.|..++=||++++.
T Consensus 260 LVlhghStDy~~~e~l~~~V~~GiaklNVgp~Lt~ 294 (450)
T 3txv_A 260 MVFEAHSTDYQTPDALRELVADGFAILKVGPGLTF 294 (450)
T ss_dssp CEEEESCCTTCCHHHHHHHHHTTEEEEEECHHHHH
T ss_pred EEEecCCCCCCCHHHHHHHHHcCCcEEEEChHHHH
Confidence 3344444 67899999999999999999999874
No 341
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=90.25 E-value=1.7 Score=40.43 Aligned_cols=116 Identities=7% Similarity=0.038 Sum_probs=77.9
Q ss_pred cChhhHHH---HHHHcCCCEEEEcccccccccHHHHHHHHHH-c--CCcEEEEECCCCCHHHHHHhhcc-----CCEEEE
Q 023494 125 VEPEQRVP---DFIKAGADIVSVHCEQSSTIHLHRTLNQIKD-L--GAKAGVVLNPATSLSAIECVLDV-----VDLVLI 193 (281)
Q Consensus 125 ~dp~~~i~---~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~-~--G~k~Glai~p~t~ie~~~~~l~~-----vD~Ilv 193 (281)
.+|+.+.+ .+.+.|.+.+=+|.-..+.....+.++++|+ . ++.+.+..|.....+...++++. +++|
T Consensus 148 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i-- 225 (391)
T 2qgy_A 148 KDTNDYLRQIEKFYGKKYGGIKIYPMLDSLSISIQFVEKVREIVGDELPLMLDLAVPEDLDQTKSFLKEVSSFNPYWI-- 225 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCSCEEECCCCSSHHHHHHHHHHHHHHHCSSSCEEEECCCCSCHHHHHHHHHHHGGGCCSEE--
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccCCChHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCHHHHHHHHHHHHhcCCCeE--
Confidence 57776654 4567899999998531111334567788887 3 57788888887777665555432 4444
Q ss_pred EeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEEcc
Q 023494 194 MSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVAGS 255 (281)
Q Consensus 194 msV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~VvGS 255 (281)
.|++.+..++-.+++++.. +++|..|+.+. ++.+.++++.| +|++.+--
T Consensus 226 --------EqP~~~~d~~~~~~l~~~~-----~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~ 276 (391)
T 2qgy_A 226 --------EEPVDGENISLLTEIKNTF-----NMKVVTGEKQSGLVHFRELISRNAADIFNPDI 276 (391)
T ss_dssp --------ECSSCTTCHHHHHHHHHHC-----SSCEEECTTCCSHHHHHHHHHTTCCSEECCBT
T ss_pred --------eCCCChhhHHHHHHHHhhC-----CCCEEEcCCcCCHHHHHHHHHcCCCCEEEECc
Confidence 2455555566666666543 47999999996 78888888777 78887643
No 342
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=90.15 E-value=6.4 Score=35.65 Aligned_cols=151 Identities=13% Similarity=0.124 Sum_probs=88.8
Q ss_pred cCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChh-----hHHHHHHHcCCCEEEE
Q 023494 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPE-----QRVPDFIKAGADIVSV 144 (281)
Q Consensus 70 ~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~-----~~i~~~~~aGAd~Itv 144 (281)
.++.+.++.+...+.|. ++|-||.--..-.-...+...|+ .++++..+||-+.|-- .++..+.++|.+.|.+
T Consensus 29 ~~l~~~~~~L~~~~pd~--vsVT~~~~g~~r~~t~~~a~~i~-~~g~~~i~Hltc~~~~~~~l~~~L~~~~~~GI~niLa 105 (310)
T 3apt_A 29 EALFRTLEELKAFRPAF--VSITYGAMGSTRERSVAWAQRIQ-SLGLNPLAHLTVAGQSRKEVAEVLHRFVESGVENLLA 105 (310)
T ss_dssp HHHHHHHHHHGGGCCSE--EEECCCSTTCSHHHHHHHHHHHH-HTTCCBCEEEECTTSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHhcCCCCE--EEEecCCCCCcchhHHHHHHHHH-HhCCCeEEEeecCCCCHHHHHHHHHHHHHCCCCEEEE
Confidence 35667788887777887 47777521110111334566677 4689999999996542 2455677899987765
Q ss_pred c-cccc-----------ccccHHHHHHHHHHc-C--CcEEEEECCCC-----CH-HHHHHhhc----cCCEEEEEeecCC
Q 023494 145 H-CEQS-----------STIHLHRTLNQIKDL-G--AKAGVVLNPAT-----SL-SAIECVLD----VVDLVLIMSVNPG 199 (281)
Q Consensus 145 h-~Ea~-----------~~~~i~~~l~~ik~~-G--~k~Glai~p~t-----~i-e~~~~~l~----~vD~IlvmsV~pG 199 (281)
. ++.. ...+..++++.+|+. | ..+|++.+|.. +. .++..+.. .+|++.- .+.
T Consensus 106 LrGD~p~~~g~~~~~~~~f~~a~~Lv~~ir~~~g~~f~igvA~yPE~Hp~~~~~~~d~~~Lk~Kv~aGAdf~iT---Q~f 182 (310)
T 3apt_A 106 LRGDPPRGERVFRPHPEGFRYAAELVALIRERYGDRVSVGGAAYPEGHPESESLEADLRHFKAKVEAGLDFAIT---QLF 182 (310)
T ss_dssp ECCCCSTTCCSCCCCTTSCSSHHHHHHHHHHHHGGGSEEEEEECTTCCTTSSCHHHHHHHHHHHHHHHCSEEEE---CCC
T ss_pred EcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhCCCCeEEEEEeCCCcCCCCCCHHHHHHHHHHHHHcCCCEEEe---ccc
Confidence 4 2211 022577888888887 6 79999999841 22 23333333 3787752 222
Q ss_pred CCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC
Q 023494 200 FGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG 236 (281)
Q Consensus 200 ~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~ 236 (281)
|..+.+ .++.+.+.+.|.+++| -.||-
T Consensus 183 -----fD~~~~---~~f~~~~r~~Gi~vPI--i~GIm 209 (310)
T 3apt_A 183 -----FNNAHY---FGFLERARRAGIGIPI--LPGIM 209 (310)
T ss_dssp -----SCHHHH---HHHHHHHHHTTCCSCE--ECEEC
T ss_pred -----CCHHHH---HHHHHHHHHcCCCCeE--EEEec
Confidence 334443 3334444445555554 45554
No 343
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=90.12 E-value=4.8 Score=38.14 Aligned_cols=126 Identities=14% Similarity=0.256 Sum_probs=73.1
Q ss_pred HHHHHcCcCCCCC--eeEEEEecChh----hHHHHHHHcCCCEEEEcccccc------------cccHHHHHHHHHHcCC
Q 023494 105 LVVDALRPVTDLP--LDVHLMIVEPE----QRVPDFIKAGADIVSVHCEQSS------------TIHLHRTLNQIKDLGA 166 (281)
Q Consensus 105 ~~I~~ir~~t~~~--idaHLmv~dp~----~~i~~~~~aGAd~Itvh~Ea~~------------~~~i~~~l~~ik~~G~ 166 (281)
++++.+++..+.. ..+.+ -.||. +.++.+.++|.+.|++..++.+ .++..+.++.+++.|+
T Consensus 125 ~ll~~i~~~~~~~~~~eiti-e~~p~~l~~e~l~~L~~~G~~rislGvQS~~~~~l~~i~R~~~~~~~~~ai~~~r~~G~ 203 (457)
T 1olt_A 125 RLMKLLRENFQFNADAEISI-EVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGF 203 (457)
T ss_dssp HHHHHHHHHSCEEEEEEEEE-EECSSSCCTHHHHHHHHTTCCEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCCCcEEEE-EEccCcCCHHHHHHHHHcCCCEEEEeeccCCHHHHHHhCCCCCHHHHHHHHHHHHHcCC
Confidence 3455555532221 22333 24664 5788899999999999987641 1235677888899999
Q ss_pred c-EEEEE---CCCCCHHHHHHhhc-----cCCEEEEEee--cCCCC-CCcc-----c---hhHHHHHHHHHHHhhhcCCC
Q 023494 167 K-AGVVL---NPATSLSAIECVLD-----VVDLVLIMSV--NPGFG-GQSF-----I---ESQVKKISDLRRMCLEKGVN 226 (281)
Q Consensus 167 k-~Glai---~p~t~ie~~~~~l~-----~vD~IlvmsV--~pG~~-GQ~f-----~---~~~l~kI~~lr~l~~~~~~~ 226 (281)
. +.+.+ -|....+.+.+-++ .+|.|.+... .||.. .|.. . .+..+..+.+.+.+.+.|+.
T Consensus 204 ~~v~~dlI~GlPget~e~~~~tl~~~~~l~~~~i~~y~l~~~p~t~~~~~~~~~~~lp~~~~~~~~~~~~~~~L~~~Gy~ 283 (457)
T 1olt_A 204 TSTNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSGYQ 283 (457)
T ss_dssp CSCEEEEEESCTTCCHHHHHHHHHHHHHHCCSEEEEEECCCCTTTSGGGGGSCGGGSCCHHHHHHHHHHHHHHHHHTTCE
T ss_pred CcEEEEEEcCCCCCCHHHHHHHHHHHHhcCcCEEEeecCcCCcCchhHhhccccCCCcCHHHHHHHHHHHHHHHHHCCCe
Confidence 7 76654 35656655555443 2788877654 47642 2211 1 22344556666666665542
Q ss_pred CeEEEe
Q 023494 227 PWIEVD 232 (281)
Q Consensus 227 ~~I~VD 232 (281)
.++++
T Consensus 284 -~yeis 288 (457)
T 1olt_A 284 -FIGMD 288 (457)
T ss_dssp -EEETT
T ss_pred -EEEec
Confidence 34443
No 344
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=89.96 E-value=1.1 Score=41.25 Aligned_cols=123 Identities=16% Similarity=0.256 Sum_probs=79.4
Q ss_pred CeeEEEEecChhhHHH---HHHHcCCCEEEEcccccccccHHHHHHHHHHc---CCcEEEEECCCCCHHHHH-Hhhcc--
Q 023494 117 PLDVHLMIVEPEQRVP---DFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL---GAKAGVVLNPATSLSAIE-CVLDV-- 187 (281)
Q Consensus 117 ~idaHLmv~dp~~~i~---~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~---G~k~Glai~p~t~ie~~~-~~l~~-- 187 (281)
++...+-..+|+.+.+ .+.+.|.+.+=+|.-. +.....+.++++|+. ++.+.+..|.....+... ++++.
T Consensus 132 ~~~~~i~~~~~~~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~~l~ 210 (369)
T 2p8b_A 132 PVTHVLSIADPENMAEEAASMIQKGYQSFKMKVGT-NVKEDVKRIEAVRERVGNDIAIRVDVNQGWKNSANTLTALRSLG 210 (369)
T ss_dssp ECCEEECSCCHHHHHHHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHHHHHHCTTSEEEEECTTTTBSHHHHHHHHHTST
T ss_pred eeeEEecCCChHHHHHHHHHHHHcCcCEEEEEeCC-CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHH
Confidence 3334344457876654 4567899999998643 223344677777763 466777777776666555 55543
Q ss_pred ---CCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEEcc
Q 023494 188 ---VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVAGS 255 (281)
Q Consensus 188 ---vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~VvGS 255 (281)
+++| .|++.+..++-++++++. .+++|..|+.++ ++.+.++++.| +|++.+--
T Consensus 211 ~~~i~~i----------EqP~~~~d~~~~~~l~~~-----~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~ 268 (369)
T 2p8b_A 211 HLNIDWI----------EQPVIADDIDAMAHIRSK-----TDLPLMIDEGLKSSREMRQIIKLEAADKVNIKL 268 (369)
T ss_dssp TSCCSCE----------ECCBCTTCHHHHHHHHHT-----CCSCEEESTTCCSHHHHHHHHHHTCCSEEEECH
T ss_pred hCCCcEE----------ECCCCcccHHHHHHHHHh-----CCCCEEeCCCCCCHHHHHHHHHhCCCCEEEeec
Confidence 2333 356655556666666653 257899999986 77888887765 89888753
No 345
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=89.93 E-value=3.1 Score=38.68 Aligned_cols=126 Identities=12% Similarity=0.051 Sum_probs=80.5
Q ss_pred CCeeEEEE-ecChhhHHH---HHHHcCCCEEEEc---cccccc-ccHHHHHHHHHHc---CCcEEEEECCCC--CHHHHH
Q 023494 116 LPLDVHLM-IVEPEQRVP---DFIKAGADIVSVH---CEQSST-IHLHRTLNQIKDL---GAKAGVVLNPAT--SLSAIE 182 (281)
Q Consensus 116 ~~idaHLm-v~dp~~~i~---~~~~aGAd~Itvh---~Ea~~~-~~i~~~l~~ik~~---G~k~Glai~p~t--~ie~~~ 182 (281)
+|+.+.+. ..+|+.+.+ .+.+.|.+.+=+| .-. +. ....+.++++|+. ++.+.+..|... ..+...
T Consensus 134 vp~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~spvG~-~~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~~~a~ 212 (401)
T 2hzg_A 134 KRPYASLLFGDTPQETLERARAARRDGFAAVKFGWGPIGR-GTVAADADQIMAAREGLGPDGDLMVDVGQIFGEDVEAAA 212 (401)
T ss_dssp BEEEEEEECCSSHHHHHHHHHHHHHTTCSEEEEESTTTTS-SCHHHHHHHHHHHHHHHCSSSEEEEECTTTTTTCHHHHH
T ss_pred eEeeEEcCCCCCHHHHHHHHHHHHHhCCCeEEEcCCCCCC-CHHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCCHHHHH
Confidence 45555443 357877654 3567899999998 321 12 3345677777763 467778888777 776655
Q ss_pred Hhhcc-----CCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEEcc
Q 023494 183 CVLDV-----VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVAGS 255 (281)
Q Consensus 183 ~~l~~-----vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~VvGS 255 (281)
++++. +++| .|++.+..++-++++++. ..+++|..|+.+. ++.+..+++.| +|++.+--
T Consensus 213 ~~~~~l~~~~i~~i----------EqP~~~~d~~~~~~l~~~----~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~ 278 (401)
T 2hzg_A 213 ARLPTLDAAGVLWL----------EEPFDAGALAAHAALAGR----GARVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDC 278 (401)
T ss_dssp TTHHHHHHTTCSEE----------ECCSCTTCHHHHHHHHTT----CCSSEEEECTTCSSHHHHHHHHHHSCCSEEEECH
T ss_pred HHHHHHHhcCCCEE----------ECCCCccCHHHHHHHHhh----CCCCCEEecCCcCCHHHHHHHHHCCCCCEEEeCc
Confidence 55432 4444 244555555555555530 2358999999996 78888888766 89988753
Q ss_pred c
Q 023494 256 A 256 (281)
Q Consensus 256 a 256 (281)
.
T Consensus 279 ~ 279 (401)
T 2hzg_A 279 G 279 (401)
T ss_dssp H
T ss_pred c
Confidence 3
No 346
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=89.75 E-value=1.6 Score=40.73 Aligned_cols=113 Identities=10% Similarity=0.012 Sum_probs=75.5
Q ss_pred ChhhHHH---HHHHcCCCEEEEcccccccccHHHHHHHHHHc-C--CcEEEEECCCCCHHHHHHhhcc-----CCEEEEE
Q 023494 126 EPEQRVP---DFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL-G--AKAGVVLNPATSLSAIECVLDV-----VDLVLIM 194 (281)
Q Consensus 126 dp~~~i~---~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~-G--~k~Glai~p~t~ie~~~~~l~~-----vD~Ilvm 194 (281)
+|+.+.+ .+.+.|.+.+=+|.-........+.++.+|+. | +.+.+..|.....+...++++. +++|
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~avG~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~i--- 251 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLKVGQPNCAEDIRRLTAVREALGDEFPLMVDANQQWDRETAIRMGRKMEQFNLIWI--- 251 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCSCHHHHHHHHHHHHHHHCSSSCEEEECTTCSCHHHHHHHHHHHGGGTCSCE---
T ss_pred CHHHHHHHHHHHHHhCCCeEEEecCCCCHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHHcCCcee---
Confidence 6776654 35678999999986421123345677788775 4 6778888877777665555443 3433
Q ss_pred eecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEE
Q 023494 195 SVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVA 253 (281)
Q Consensus 195 sV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~Vv 253 (281)
.|++.+..++-.+++++.. +++|..|+.+. ++.+..+++.| +|++.+
T Consensus 252 -------EqP~~~~d~~~~~~l~~~~-----~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 300 (398)
T 2pp0_A 252 -------EEPLDAYDIEGHAQLAAAL-----DTPIATGEMLTSFREHEQLILGNASDFVQP 300 (398)
T ss_dssp -------ECCSCTTCHHHHHHHHHHC-----SSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred -------eCCCChhhHHHHHHHHhhC-----CCCEEecCCcCCHHHHHHHHHcCCCCEEEe
Confidence 3555555566666666543 47899999986 78888888777 787755
No 347
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=89.60 E-value=0.78 Score=45.09 Aligned_cols=121 Identities=14% Similarity=0.099 Sum_probs=79.9
Q ss_pred HHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhH--HHHHHHcCCCEEEEcccccc
Q 023494 73 GEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQR--VPDFIKAGADIVSVHCEQSS 150 (281)
Q Consensus 73 ~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~--i~~~~~aGAd~Itvh~Ea~~ 150 (281)
.+-++.|.++|+|.|-+|...||-.- =.+.++.||+..+ ++.++.-|...+ .+.+.++|||.|-+..-..+
T Consensus 283 ~eR~~aLv~AGvD~iviD~ahGhs~~----v~~~i~~ik~~~p---~~~viaGNVaT~e~a~~Li~aGAD~vkVGiGpGS 355 (556)
T 4af0_A 283 KDRLKLLAEAGLDVVVLDSSQGNSVY----QIEFIKWIKQTYP---KIDVIAGNVVTREQAAQLIAAGADGLRIGMGSGS 355 (556)
T ss_dssp HHHHHHHHHTTCCEEEECCSCCCSHH----HHHHHHHHHHHCT---TSEEEEEEECSHHHHHHHHHHTCSEEEECSSCST
T ss_pred HHHHHHHHhcCCcEEEEeccccccHH----HHHHHHHHHhhCC---cceEEeccccCHHHHHHHHHcCCCEEeecCCCCc
Confidence 44577888999999999999886321 2467777777421 344566554433 55678999999998853210
Q ss_pred -----------ccc---HHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCCEEEEEeecCCC
Q 023494 151 -----------TIH---LHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGF 200 (281)
Q Consensus 151 -----------~~~---i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG~ 200 (281)
.+. +.++.+.++++|+.+.-.=.-.++-...+.+.-.+|.|++.+...|.
T Consensus 356 iCtTr~v~GvG~PQ~tAi~~~a~~a~~~~vpvIADGGI~~sGDi~KAlaaGAd~VMlGsllAGt 419 (556)
T 4af0_A 356 ICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIADGGIGNIGHIAKALALGASAVMMGGLLAGT 419 (556)
T ss_dssp TBCCTTTCCSCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTB
T ss_pred ccccccccCCCCcHHHHHHHHHHHHHHcCCCEEecCCcCcchHHHHHhhcCCCEEEEchhhccc
Confidence 111 44566777788876554433345667777787789999987665554
No 348
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=89.54 E-value=1.7 Score=38.11 Aligned_cols=74 Identities=15% Similarity=0.263 Sum_probs=46.4
Q ss_pred EEEEecChhh-----HHHHHHHcCCCEEEEccccc-ccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCCEEEE
Q 023494 120 VHLMIVEPEQ-----RVPDFIKAGADIVSVHCEQS-STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLI 193 (281)
Q Consensus 120 aHLmv~dp~~-----~i~~~~~aGAd~Itvh~Ea~-~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD~Ilv 193 (281)
.|++.-||.. .++.+.++|+|.|-+..... +.+...++++.+|+..+-+.+...-+.++ ...+|.+++
T Consensus 10 ~~it~gDP~~~~t~~~~~~l~~~GaD~IelG~S~g~t~~~~~~~v~~ir~~~~Pivl~~y~~n~i------~~gvDg~ii 83 (234)
T 2f6u_A 10 RHITKLDPDRTNTDEIIKAVADSGTDAVMISGTQNVTYEKARTLIEKVSQYGLPIVVEPSDPSNV------VYDVDYLFV 83 (234)
T ss_dssp CEEEEECTTSCCCHHHHHHHHTTTCSEEEECCCTTCCHHHHHHHHHHHTTSCCCEEECCSSCCCC------CCCSSEEEE
T ss_pred eEEEeeCCCccccHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHHhcCCCCCEEEecCCcchh------hcCCCEEEE
Confidence 4677778853 57788899999999997532 13346677777776444444432221233 345777777
Q ss_pred EeecCC
Q 023494 194 MSVNPG 199 (281)
Q Consensus 194 msV~pG 199 (281)
+.+.+.
T Consensus 84 pdLp~e 89 (234)
T 2f6u_A 84 PTVLNS 89 (234)
T ss_dssp EEETTB
T ss_pred cccCCC
Confidence 777554
No 349
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=89.54 E-value=4.8 Score=37.26 Aligned_cols=127 Identities=16% Similarity=0.215 Sum_probs=82.8
Q ss_pred CCeeEEEEecChhhHHHHH---HHc-CCCEEEEcccccccccHHHHHHHHHHc-C--CcEEEEECCCCCHHHHHHhhcc-
Q 023494 116 LPLDVHLMIVEPEQRVPDF---IKA-GADIVSVHCEQSSTIHLHRTLNQIKDL-G--AKAGVVLNPATSLSAIECVLDV- 187 (281)
Q Consensus 116 ~~idaHLmv~dp~~~i~~~---~~a-GAd~Itvh~Ea~~~~~i~~~l~~ik~~-G--~k~Glai~p~t~ie~~~~~l~~- 187 (281)
+++...+-..+|++.++.+ .+. |...+=+..-....+.-.+.++++|+. | +.+.+..|.....+....+++.
T Consensus 138 v~~~~t~~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~A~~~~~~l 217 (383)
T 3i4k_A 138 VDVTWALGVLPLDVAVAEIEERIEEFGNRSFKLKMGAGDPAEDTRRVAELAREVGDRVSLRIDINARWDRRTALHYLPIL 217 (383)
T ss_dssp EEBCEEECSCCHHHHHHHHHHHHHHHCCSEEEEECCSSCHHHHHHHHHHHHHTTTTTSEEEEECTTCSCHHHHHHHHHHH
T ss_pred EEEeEEeeCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCCHHHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHH
Confidence 3444455556787665543 455 999998875321122334567777775 4 6788888888887765555432
Q ss_pred ----CCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEEcccc
Q 023494 188 ----VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVAGSAV 257 (281)
Q Consensus 188 ----vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~VvGSaI 257 (281)
+++| .|++.+..++-++++++.. +++|..|+.+. .+.+..+++.| +|++.+--.-
T Consensus 218 ~~~~i~~i----------EqP~~~~d~~~~~~l~~~~-----~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~ 278 (383)
T 3i4k_A 218 AEAGVELF----------EQPTPADDLETLREITRRT-----NVSVMADESVWTPAEALAVVKAQAADVIALKTTK 278 (383)
T ss_dssp HHTTCCEE----------ESCSCTTCHHHHHHHHHHH-----CCEEEESTTCSSHHHHHHHHHHTCCSEEEECTTT
T ss_pred HhcCCCEE----------ECCCChhhHHHHHHHHhhC-----CCCEEecCccCCHHHHHHHHHcCCCCEEEEcccc
Confidence 4444 2566665566667776654 37999999987 77888888776 7988876433
No 350
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=89.50 E-value=1.2 Score=39.30 Aligned_cols=81 Identities=16% Similarity=0.115 Sum_probs=54.8
Q ss_pred CCHHHHHHhhcc-CCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEE
Q 023494 176 TSLSAIECVLDV-VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVA 253 (281)
Q Consensus 176 t~ie~~~~~l~~-vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~Vv 253 (281)
+|.+..+.|... ++.|-+.+-+.-|.| .++.++.+++.. ++++..-++|. ...+.++..+|||.+.+
T Consensus 66 ~p~~~A~~~~~~GA~~isvlt~~~~f~G------~~~~l~~i~~~v-----~lPvl~kdfI~d~~qi~~a~~~GAD~VlL 134 (254)
T 1vc4_A 66 DPVEAALAYARGGARAVSVLTEPHRFGG------SLLDLKRVREAV-----DLPLLRKDFVVDPFMLEEARAFGASAALL 134 (254)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCCSSSCC------CHHHHHHHHHHC-----CSCEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHHcCCCEEEEecchhhhcc------CHHHHHHHHHhc-----CCCEEECCcCCCHHHHHHHHHcCCCEEEE
Confidence 345666666654 788877654333344 244556666542 47888888877 54899999999999999
Q ss_pred cccccCCCCHHHHHH
Q 023494 254 GSAVFGAKDYAEAIK 268 (281)
Q Consensus 254 GSaIf~a~dp~~~~~ 268 (281)
|.+.+. +..++.++
T Consensus 135 ~~~~l~-~~l~~l~~ 148 (254)
T 1vc4_A 135 IVALLG-ELTGAYLE 148 (254)
T ss_dssp EHHHHG-GGHHHHHH
T ss_pred CccchH-HHHHHHHH
Confidence 988776 55555444
No 351
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=89.48 E-value=10 Score=34.48 Aligned_cols=187 Identities=14% Similarity=0.115 Sum_probs=110.8
Q ss_pred EEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCc--ccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHc--
Q 023494 62 PSILSANFAKLGEQVKAVELAGCDWIHVDVMDGR--FVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA-- 137 (281)
Q Consensus 62 pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~--fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~a-- 137 (281)
|..=+-++..+.-.++.+++.+...| +-+-.|. |.+. .+ ...+..+-+..+.|+-+||==..-...+..++++
T Consensus 30 ~AfNv~n~e~~~Avl~AAee~~sPvI-lq~s~g~~~y~g~-~~-~~~~~~~A~~~~VPVaLHlDHg~~~e~i~~ai~~~~ 106 (306)
T 3pm6_A 30 PAICVYNLEGILAIIRAAEHKRSPAM-ILLFPWAIQYADS-LL-VRTAASACRAASVPITLHLDHAQDPEIIKRAADLSR 106 (306)
T ss_dssp EEEECSSHHHHHHHHHHHHHTTCCEE-EEECHHHHHHHTT-HH-HHHHHHHHHHCSSCEEEEEEEECCHHHHHHHHHTC-
T ss_pred EEEeeCCHHHHHHHHHHHHHhCCCEE-EEcChhHHhhccH-HH-HHHHHHHHHHCCCCEEEEcCCCCCHHHHHHHHHhhh
Confidence 33333344444456677788887765 4444432 2210 01 1223333333679999999665444578888998
Q ss_pred ------CCCEEEEcccccc----cccHHHHHHHHHHcCCcEEEEE-----------C------CCCCHHHHHHhhc-cCC
Q 023494 138 ------GADIVSVHCEQSS----TIHLHRTLNQIKDLGAKAGVVL-----------N------PATSLSAIECVLD-VVD 189 (281)
Q Consensus 138 ------GAd~Itvh~Ea~~----~~~i~~~l~~ik~~G~k~Glai-----------~------p~t~ie~~~~~l~-~vD 189 (281)
|.+.|-+=.-..+ ...-+++++.+++.|+-+=.-+ + .-|..++..++.+ .+|
T Consensus 107 ~~~~~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaElG~igG~Edgv~~~~~~~~~yT~Peea~~Fv~TgvD 186 (306)
T 3pm6_A 107 SETHEPGFDSIMVDMSHFSKEENLRLTRELVAYCNARGIATEAEPGRIEGGEDGVQDTVDLEGVLTTPEESEEFVATGIN 186 (306)
T ss_dssp -----CCCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEECSSBCCCCBTTBCCCTTCCCBCCCHHHHHHHHTTTCS
T ss_pred hccCCCCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCccccccccccCCCHHHHHHHHHcCCC
Confidence 8887776543222 1224467777887776552110 1 1366777777764 388
Q ss_pred EEEE--EeecCCCC---CCccchhHHHHHHHHHHHhhhcCCCCeEEEecC--CChhcHHHHHHcCCcEEEEccccc
Q 023494 190 LVLI--MSVNPGFG---GQSFIESQVKKISDLRRMCLEKGVNPWIEVDGG--VGPKNAYKVIEAGANALVAGSAVF 258 (281)
Q Consensus 190 ~Ilv--msV~pG~~---GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGG--I~~e~i~~~~~aGAD~~VvGSaIf 258 (281)
.+.+ .++| |.. +.+.. +++|+++++.+.. ++++..=|| +..+.++++++.|+--+=+++.+.
T Consensus 187 ~LAvaiGt~H-G~Yk~~~p~Ld---~~~L~~I~~~v~~---~vpLVlHGgSG~p~e~i~~ai~~GV~KiNi~Tdl~ 255 (306)
T 3pm6_A 187 WLAPAFGNVH-GNYGPRGVQLD---YERLQRINEAVGE---RVGLVLHGADPFTKEIFEKCIERGVAKVNVNRAVN 255 (306)
T ss_dssp EECCCSSCCS-SCCCTTCCCCC---HHHHHHHHHHHTT---TSEEEECSCTTCCHHHHHHHHHTTEEEEEESHHHH
T ss_pred EEEEEcCccc-cCcCCCCCccC---HHHHHHHHHHhCC---CCCEEeeCCCCCCHHHHHHHHHcCCeEEEeChHHH
Confidence 6643 2333 221 12233 5566666666531 478888775 558899999999999999998764
No 352
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=89.41 E-value=1.1 Score=41.48 Aligned_cols=116 Identities=12% Similarity=0.082 Sum_probs=74.6
Q ss_pred cCh---hhHHHH---HHHcCCCEEEEcccccccccHHHHHHHHHHc---CCcEEEEECCCCCHHHHHHhhcc---C-CEE
Q 023494 125 VEP---EQRVPD---FIKAGADIVSVHCEQSSTIHLHRTLNQIKDL---GAKAGVVLNPATSLSAIECVLDV---V-DLV 191 (281)
Q Consensus 125 ~dp---~~~i~~---~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~---G~k~Glai~p~t~ie~~~~~l~~---v-D~I 191 (281)
.+| +.+.+. +.+.|.+.+=+|.-..+.....+.++++|+. ++.+.+..|.....+....+++. . +..
T Consensus 135 ~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~~i~ 214 (382)
T 2gdq_A 135 DSPQWISRSVSNVEAQLKKGFEQIKVKIGGTSFKEDVRHINALQHTAGSSITMILDANQSYDAAAAFKWERYFSEWTNIG 214 (382)
T ss_dssp SSTTHHHHHHHHHHHHHTTTCCEEEEECSSSCHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHTTHHHHTTCSCEE
T ss_pred CCcccHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhhCCCCEEEEECCCCCCHHHHHHHHHHHhhccCCe
Confidence 577 766543 4678999999986421123344667777763 46778888887777766665543 2 222
Q ss_pred EEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEE
Q 023494 192 LIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVA 253 (281)
Q Consensus 192 lvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~Vv 253 (281)
. ++ |++.+..++-.+++++. .+++|..|+.+. ++.+..+++.| +|++.+
T Consensus 215 ~---iE-----qP~~~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 265 (382)
T 2gdq_A 215 W---LE-----EPLPFDQPQDYAMLRSR-----LSVPVAGGENMKGPAQYVPLLSQRCLDIIQP 265 (382)
T ss_dssp E---EE-----CCSCSSCHHHHHHHHTT-----CSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred E---EE-----CCCCcccHHHHHHHHhh-----CCCCEEecCCcCCHHHHHHHHHcCCCCEEec
Confidence 2 22 44545455555555543 357999999997 78888888876 787765
No 353
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=89.35 E-value=5.2 Score=35.75 Aligned_cols=29 Identities=14% Similarity=-0.065 Sum_probs=22.2
Q ss_pred ccCHHHHHHHHHHcCCCeEEEEee---eCccc
Q 023494 69 FAKLGEQVKAVELAGCDWIHVDVM---DGRFV 97 (281)
Q Consensus 69 ~~~l~~~l~~l~~~G~d~iHiDIm---DG~fv 97 (281)
+-|...+++.+.+.|+|++++||. ||.+|
T Consensus 46 pENTl~af~~A~~~g~d~iE~Dv~~TkDg~~V 77 (292)
T 3mz2_A 46 PENSMETFENTLSYTPATFEIDPRLTKDSVIV 77 (292)
T ss_dssp CTTCHHHHHHHHHHCCCEEEECEEECTTCCEE
T ss_pred CccHHHHHHHHHHcCCCEEEEEEeECCCCcEE
Confidence 346667788888899999999974 66544
No 354
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=89.33 E-value=3 Score=38.16 Aligned_cols=126 Identities=16% Similarity=0.165 Sum_probs=79.5
Q ss_pred eeEEEEecChhhHHH---HHHHcCCCEEEEcccccccccHHHHHHHHHH---cCCcEEEEECCCCCHHHHHHhhccCCEE
Q 023494 118 LDVHLMIVEPEQRVP---DFIKAGADIVSVHCEQSSTIHLHRTLNQIKD---LGAKAGVVLNPATSLSAIECVLDVVDLV 191 (281)
Q Consensus 118 idaHLmv~dp~~~i~---~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~---~G~k~Glai~p~t~ie~~~~~l~~vD~I 191 (281)
....+-..+|+.+.+ .+.+.|...+=+..-.. .+.-.+.++++|+ .++.+.+..|.....+....+++..+-.
T Consensus 131 ~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~K~g~~-~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~L~~~ 209 (354)
T 3jva_A 131 TDITLGIDEPNVMAQKAVEKVKLGFDTLKIKVGTG-IEADIARVKAIREAVGFDIKLRLDANQAWTPKDAVKAIQALADY 209 (354)
T ss_dssp CCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCSC-HHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHTTTS
T ss_pred eeEEeCCCCHHHHHHHHHHHHHhCCCeEEEEeCCC-HHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHhc
Confidence 344455578876654 45578999998886431 2223456677776 3567788888888887665555432111
Q ss_pred EEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEEc
Q 023494 192 LIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVAG 254 (281)
Q Consensus 192 lvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~VvG 254 (281)
-+.-++ |++.+..++-++++++.. +++|..|+.+. .+.+..+++.| +|++.+-
T Consensus 210 ~i~~iE-----qP~~~~d~~~~~~l~~~~-----~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k 264 (354)
T 3jva_A 210 QIELVE-----QPVKRRDLEGLKYVTSQV-----NTTIMADESCFDAQDALELVKKGTVDVINIK 264 (354)
T ss_dssp CEEEEE-----CCSCTTCHHHHHHHHHHC-----SSEEEESTTCCSHHHHHHHHHHTCCSEEEEC
T ss_pred CCCEEE-----CCCChhhHHHHHHHHHhC-----CCCEEEcCCcCCHHHHHHHHHcCCCCEEEEC
Confidence 111112 556555566666666543 47999999988 77787777764 7988775
No 355
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=89.31 E-value=2.5 Score=40.80 Aligned_cols=120 Identities=15% Similarity=0.080 Sum_probs=69.9
Q ss_pred cCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCC-CCCeeEEEEecChhhHHHHHHHcCCCEEEEcccc
Q 023494 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQ 148 (281)
Q Consensus 70 ~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t-~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea 148 (281)
.+..+.++.+.++|+|.+|+|..-|+ | .+-.+.++++|+.+ +.|+.+. -+.+ .+..+.+.++|+|+|.+..+.
T Consensus 254 ~~~~~~a~~~~~aG~d~v~i~~~~G~--~--~~~~~~i~~i~~~~~~~pvi~~-~v~t-~~~a~~l~~aGad~I~vg~~~ 327 (514)
T 1jcn_A 254 EDDKYRLDLLTQAGVDVIVLDSSQGN--S--VYQIAMVHYIKQKYPHLQVIGG-NVVT-AAQAKNLIDAGVDGLRVGMGC 327 (514)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCCC--S--HHHHHHHHHHHHHCTTCEEEEE-EECS-HHHHHHHHHHTCSEEEECSSC
T ss_pred hhhHHHHHHHHHcCCCEEEeeccCCc--c--hhHHHHHHHHHHhCCCCceEec-ccch-HHHHHHHHHcCCCEEEECCCC
Confidence 34567788899999999999876553 2 12357789998875 6777652 1233 346778889999999883221
Q ss_pred c-------------ccccHHHHHHHHHH-cCCcEEEEECCCCCHHHHHHhhccCCEEEEEe
Q 023494 149 S-------------STIHLHRTLNQIKD-LGAKAGVVLNPATSLSAIECVLDVVDLVLIMS 195 (281)
Q Consensus 149 ~-------------~~~~i~~~l~~ik~-~G~k~Glai~p~t~ie~~~~~l~~vD~Ilvms 195 (281)
. +.......+..+++ .++.+..+=.-.++.+..+.+...+|.|.+.+
T Consensus 328 G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia~GGI~~~~di~kala~GAd~V~iG~ 388 (514)
T 1jcn_A 328 GSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALALGASTVMMGS 388 (514)
T ss_dssp SCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEEST
T ss_pred CcccccccccCCCccchhHHHHHHHHHhhCCCCEEEECCCCCHHHHHHHHHcCCCeeeECH
Confidence 0 01112233444443 35444332111233333333444599998754
No 356
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=89.26 E-value=1.5 Score=38.07 Aligned_cols=138 Identities=10% Similarity=0.120 Sum_probs=74.8
Q ss_pred EecChh---hHHHHHHHcCCCEEEE-----cccccccccHHHHHHHHHHc---CCcEEEEECCCCCHHHHHHhhc-cCCE
Q 023494 123 MIVEPE---QRVPDFIKAGADIVSV-----HCEQSSTIHLHRTLNQIKDL---GAKAGVVLNPATSLSAIECVLD-VVDL 190 (281)
Q Consensus 123 mv~dp~---~~i~~~~~aGAd~Itv-----h~Ea~~~~~i~~~l~~ik~~---G~k~Glai~p~t~ie~~~~~l~-~vD~ 190 (281)
+..|.. +-++.+.++|+|++++ |.-.. ...=...++.+|+. .+...+-+..++|...++.+.+ .+|+
T Consensus 12 l~~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn-~~~G~~~v~~ir~~~~~~~~~dvhLmv~~p~~~i~~~~~aGad~ 90 (228)
T 3ovp_A 12 LNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPN-ITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQ 90 (228)
T ss_dssp TTSCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSC-BCBCHHHHHHHHHHHCSSSCEEEEEECSCGGGGHHHHHHHTCSE
T ss_pred eeCCchhHHHHHHHHHHcCCCEEEEEecCCCcCcc-cccCHHHHHHHHHhhCCCCcEEEEEEeCCHHHHHHHHHHcCCCE
Confidence 334554 3466778899999999 64310 11112467778876 3455555666777766776666 4899
Q ss_pred EEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEccc--ccCC----CCHH
Q 023494 191 VLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSA--VFGA----KDYA 264 (281)
Q Consensus 191 IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSa--If~a----~dp~ 264 (281)
|.++. +.+ . ...+-++++|+ .|...-+.+-.+-..+.+..+.. .+|.+.+.|- =|.. +..-
T Consensus 91 itvH~-Ea~---~----~~~~~i~~i~~----~G~k~gval~p~t~~e~l~~~l~-~~D~Vl~msv~pGf~Gq~f~~~~l 157 (228)
T 3ovp_A 91 YTFHL-EAT---E----NPGALIKDIRE----NGMKVGLAIKPGTSVEYLAPWAN-QIDMALVMTVEPGFGGQKFMEDMM 157 (228)
T ss_dssp EEEEG-GGC---S----CHHHHHHHHHH----TTCEEEEEECTTSCGGGTGGGGG-GCSEEEEESSCTTTCSCCCCGGGH
T ss_pred EEEcc-CCc---h----hHHHHHHHHHH----cCCCEEEEEcCCCCHHHHHHHhc-cCCeEEEeeecCCCCCcccCHHHH
Confidence 98752 211 1 12222333333 23333344445555666666554 4787765442 1221 2223
Q ss_pred HHHHHHHHhc
Q 023494 265 EAIKGIKTSK 274 (281)
Q Consensus 265 ~~~~~l~~~~ 274 (281)
+.++++++..
T Consensus 158 ~ki~~lr~~~ 167 (228)
T 3ovp_A 158 PKVHWLRTQF 167 (228)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhc
Confidence 4566666543
No 357
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=89.22 E-value=0.66 Score=43.24 Aligned_cols=115 Identities=9% Similarity=0.009 Sum_probs=76.3
Q ss_pred ChhhHHH---HHHHcCCCEEEEcccccccccHHHHHHHHHH-c--CCcEEEEECCCCCHHHHHHhhcc-----CCEEEEE
Q 023494 126 EPEQRVP---DFIKAGADIVSVHCEQSSTIHLHRTLNQIKD-L--GAKAGVVLNPATSLSAIECVLDV-----VDLVLIM 194 (281)
Q Consensus 126 dp~~~i~---~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~-~--G~k~Glai~p~t~ie~~~~~l~~-----vD~Ilvm 194 (281)
+|+.+.+ .+.+.|.+.+=+|.-..+.....+.++++|+ . ++.+.+..|.....+...++++. +++|
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i--- 241 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGGAPIEEDRMRIEAVLEEIGKDAQLAVDANGRFNLETGIAYAKMLRDYPLFWY--- 241 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSSSCHHHHHHHHHHHHHHHTTTCEEEEECTTCCCHHHHHHHHHHHTTSCCSEE---
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHHHHcCCCee---
Confidence 5666644 4567899999998653112334567777777 3 46778888877777666555443 3333
Q ss_pred eecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-----CcEEEEcc
Q 023494 195 SVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-----ANALVAGS 255 (281)
Q Consensus 195 sV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-----AD~~VvGS 255 (281)
.|++.+..++-.+++++. .+++|..|+.++ ++.+..+++.| +|++.+--
T Consensus 242 -------EqP~~~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~ik~ 296 (392)
T 1tzz_A 242 -------EEVGDPLDYALQAALAEF-----YPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQFDC 296 (392)
T ss_dssp -------ECCSCTTCHHHHHHHTTT-----CCSCEEECTTCCSHHHHHHHHHHSCCCTTTCEECCCT
T ss_pred -------cCCCChhhHHHHHHHHhh-----CCCCEEECCCCCCHHHHHHHHHcCCCccCCcEEEECc
Confidence 255555555555555432 358999999996 78889988887 89887653
No 358
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=89.13 E-value=2.2 Score=39.10 Aligned_cols=125 Identities=14% Similarity=0.226 Sum_probs=78.4
Q ss_pred CeeEEEEecChhhHHH---HHHHcCCCEEEEcccccccccHHHHHHHHHHc---CCcEEEEECCCCCHHHHHHhhcc---
Q 023494 117 PLDVHLMIVEPEQRVP---DFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL---GAKAGVVLNPATSLSAIECVLDV--- 187 (281)
Q Consensus 117 ~idaHLmv~dp~~~i~---~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~---G~k~Glai~p~t~ie~~~~~l~~--- 187 (281)
++...+-..+|+.+.+ .+.+.|.+.+=+|.-..+.....+.++++|+. ++.+.+..|.....+...++++.
T Consensus 131 ~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~d~~~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~ 210 (366)
T 1tkk_A 131 ETDYTVSVNSPEEMAADAENYLKQGFQTLKIKVGKDDIATDIARIQEIRKRVGSAVKLRLDANQGWRPKEAVTAIRKMED 210 (366)
T ss_dssp EBCEEECSCCHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHH
T ss_pred eeeEEecCCCHHHHHHHHHHHHHcCCCeEEEEeCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHhh
Confidence 3333333457876654 34577999999986421123334667777763 56777888877777665555432
Q ss_pred --CCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEEc
Q 023494 188 --VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVAG 254 (281)
Q Consensus 188 --vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~VvG 254 (281)
.+...+ .|++.+..++-++++++.. +++|..|+.++ .+.+..+++.| +|++.+-
T Consensus 211 ~~~~i~~i--------EqP~~~~d~~~~~~l~~~~-----~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik 268 (366)
T 1tkk_A 211 AGLGIELV--------EQPVHKDDLAGLKKVTDAT-----DTPIMADESVFTPRQAFEVLQTRSADLINIK 268 (366)
T ss_dssp TTCCEEEE--------ECCSCTTCHHHHHHHHHHC-----SSCEEECTTCCSHHHHHHHHHHTCCSEEEEC
T ss_pred cCCCceEE--------ECCCCcccHHHHHHHHhhC-----CCCEEEcCCCCCHHHHHHHHHhCCCCEEEee
Confidence 222222 2556555666666666543 47899999986 67788777655 7888775
No 359
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=89.12 E-value=1.6 Score=39.50 Aligned_cols=84 Identities=13% Similarity=0.094 Sum_probs=53.6
Q ss_pred ceEeEEEeccC-------ccCHHHHHHHHHHcCCCeEEEEeeeCcccccc---------cCCHHHHHHcCcCC-------
Q 023494 58 IIVSPSILSAN-------FAKLGEQVKAVELAGCDWIHVDVMDGRFVPNI---------TIGPLVVDALRPVT------- 114 (281)
Q Consensus 58 ~~i~pSila~D-------~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~---------~~G~~~I~~ir~~t------- 114 (281)
..+.+|+...+ ..++.+.++.+.+ |+|.+++.+- .|+. .+-.++++.+|+..
T Consensus 134 ~~~~v~i~~~~~~~i~~~~~~~~~aa~~~~~-g~d~iein~~----sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~ 208 (336)
T 1f76_A 134 GVLGINIGKNKDTPVEQGKDDYLICMEKIYA-YAGYIAINIS----SPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMH 208 (336)
T ss_dssp SEEEEEECCCTTSCGGGTHHHHHHHHHHHGG-GCSEEEEECC----CSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEecCCCCCcccccHHHHHHHHHHHhc-cCCEEEEEcc----CCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcc
Confidence 46888887655 4455566666655 7998877542 2331 12236778888765
Q ss_pred --CCCeeEEEEec----ChhhHHHHHHHcCCCEEEEcc
Q 023494 115 --DLPLDVHLMIV----EPEQRVPDFIKAGADIVSVHC 146 (281)
Q Consensus 115 --~~~idaHLmv~----dp~~~i~~~~~aGAd~Itvh~ 146 (281)
+.|+.+-+-.. |..++.+.+.++|+|+|++|.
T Consensus 209 g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn 246 (336)
T 1f76_A 209 HKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATN 246 (336)
T ss_dssp TSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred cccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeC
Confidence 68888743221 123346678899999999984
No 360
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=89.11 E-value=2.6 Score=37.02 Aligned_cols=132 Identities=8% Similarity=0.063 Sum_probs=73.1
Q ss_pred ceEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCccccccc---CCHHHHHHcCcCCCC-CeeEEEEe------cC-
Q 023494 58 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNIT---IGPLVVDALRPVTDL-PLDVHLMI------VE- 126 (281)
Q Consensus 58 ~~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~---~G~~~I~~ir~~t~~-~idaHLmv------~d- 126 (281)
++|..+........+++.++.+.+.|.+.+++-...-.+..... ...+.+++.-+..++ .+.+|.-. .|
T Consensus 6 mklG~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~h~~~~~nl~s~d~ 85 (303)
T 3aal_A 6 LKIGSHVSMSGKKMLLAASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGIEEIVVHAPYIINIGNTTN 85 (303)
T ss_dssp CCEEEECCCCTTTTHHHHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTTCCEEEEECCTTCCTTCSSC
T ss_pred eeeceeeecCCCccHHHHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcCCceEEEeccccccCCCCCc
Confidence 45777766654447999999999999999988211111111111 223333333222455 56666421 13
Q ss_pred hh----------hHHHHHHHcCCCEEEEcccccc----cccHHHHHHHHHH-----cCCcEEEEECCC------CCHHHH
Q 023494 127 PE----------QRVPDFIKAGADIVSVHCEQSS----TIHLHRTLNQIKD-----LGAKAGVVLNPA------TSLSAI 181 (281)
Q Consensus 127 p~----------~~i~~~~~aGAd~Itvh~Ea~~----~~~i~~~l~~ik~-----~G~k~Glai~p~------t~ie~~ 181 (281)
|. +.++.+.+.|+..+.+|.-... .+....+++.+++ .|+++++--.+. +..+.+
T Consensus 86 ~~~r~~~~~~~~~~i~~A~~lGa~~vv~h~g~~~~~~~~~~~~~~~~~l~~l~~~a~gv~l~lEn~~~~~~~~~~t~~~~ 165 (303)
T 3aal_A 86 LDTFSLGVDFLRAEIERTEAIGAKQLVLHPGAHVGAGVEAGLRQIIRGLNEVLTREQNVQIALETMAGKGSECGRTFEEL 165 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSEEEECCEECTTSCHHHHHHHHHHHHHHHCCSSCSCEEEEECCCCCTTEECSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCCCCCHHHHHHHHHHHHHHHHHhCCCCEEEEecCCCCCCccCCCHHHH
Confidence 42 1345567789999999854210 1223444555554 366666654431 255667
Q ss_pred HHhhccCC
Q 023494 182 ECVLDVVD 189 (281)
Q Consensus 182 ~~~l~~vD 189 (281)
..+++.++
T Consensus 166 ~~li~~v~ 173 (303)
T 3aal_A 166 AYIIDGVA 173 (303)
T ss_dssp HHHHHHCT
T ss_pred HHHHHhcC
Confidence 77777654
No 361
>3rpd_A Methionine synthase (B12-independent); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, rossmann fold, Zn, TRA; HET: MSE; 1.50A {Shewanella SP}
Probab=89.03 E-value=0.86 Score=42.36 Aligned_cols=89 Identities=30% Similarity=0.426 Sum_probs=51.3
Q ss_pred HHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHH-----HHHcCcC-CCC--CeeEEEEec-----C------------
Q 023494 72 LGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLV-----VDALRPV-TDL--PLDVHLMIV-----E------------ 126 (281)
Q Consensus 72 l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~-----I~~ir~~-t~~--~idaHLmv~-----d------------ 126 (281)
+.++++.+.++|+++|++|- |.++..++. ++.++.. .+. ...+|+--- |
T Consensus 173 ~~~ei~~l~~aG~~~IQiDe------P~l~~~~~~~~~~~v~~~n~~~~~~~~~~~iHiC~G~~~~~n~d~~~t~~~~~g 246 (357)
T 3rpd_A 173 LNEEAKELEAAGVDIIQFDE------PAFNVFFDEVNDWGIACLERAIEGLKCETAVHICYGYGIKANTDWKKTLGSEWR 246 (357)
T ss_dssp HHHHHHHHHHTTCSEEEEEC------GGGGTCHHHHHHTHHHHHHHHHTTCCSEEEEEECSCCSSHHHHHHHTTSCSCCC
T ss_pred HHHHHHHHHHcCCCEEEecC------ccccccHHHHHHHHHHHHHHHHhCCCCceEEEEecCCccCCccccccccccccC
Confidence 34667788899999999993 444444432 3444432 233 344475522 1
Q ss_pred -hhhHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEE
Q 023494 127 -PEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGV 170 (281)
Q Consensus 127 -p~~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Gl 170 (281)
-...++.+.+.++|.+++-.... ... .+.++.++ |..+++
T Consensus 247 ~y~~i~~~l~~~~~D~i~lE~~~~-r~~-~e~l~~~~--~k~v~l 287 (357)
T 3rpd_A 247 QYEEVFPKLQKSNIDIISLECHNS-HVP-MELLELIR--GKKVMV 287 (357)
T ss_dssp GGGGTHHHHHHSSCCEEEECCTTC-CCC-GGGGGGGT--TSEEEE
T ss_pred cHHHHHHHHHhCCCCEEEEEecCC-CCC-hHHHHhcC--CCEEEe
Confidence 12346778889999999886542 111 23445443 455655
No 362
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=88.95 E-value=2.6 Score=38.83 Aligned_cols=124 Identities=13% Similarity=0.072 Sum_probs=81.1
Q ss_pred CCeeEEEEecChhhHHHH---HHHc-CCCEEEEcccccccccHHHHHHHHHH---cCCcEEEEECCCCCHHHHHHhhcc-
Q 023494 116 LPLDVHLMIVEPEQRVPD---FIKA-GADIVSVHCEQSSTIHLHRTLNQIKD---LGAKAGVVLNPATSLSAIECVLDV- 187 (281)
Q Consensus 116 ~~idaHLmv~dp~~~i~~---~~~a-GAd~Itvh~Ea~~~~~i~~~l~~ik~---~G~k~Glai~p~t~ie~~~~~l~~- 187 (281)
+++...+-..+|+..++. +.+. |...+=+..-..+...-.+.++++|+ .+..+.+..|.....+....+++.
T Consensus 129 v~~~~~~~~~~~~~~~~~a~~~~~~~G~~~~K~K~g~~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~l 208 (367)
T 3dg3_A 129 MRVSHMLGFDDPVKMVAEAERIRETYGINTFKVKVGRRPVQLDTAVVRALRERFGDAIELYVDGNRGWSAAESLRAMREM 208 (367)
T ss_dssp EEEEEEEESSCHHHHHHHHHHHHHHHCCCEEEEECCCSSTHHHHHHHHHHHHHHGGGSEEEEECTTCSCHHHHHHHHHHT
T ss_pred EEEEEEecCCCHHHHHHHHHHHHHhcCccEEEEeeCCChhhhHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHH
Confidence 445555556788876554 4556 99999888632112122356677776 356788888888888766655543
Q ss_pred ----CCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEEc
Q 023494 188 ----VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVAG 254 (281)
Q Consensus 188 ----vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~VvG 254 (281)
+++| .|++.+..++-.+++++.. +++|..|+.+. .+.+..+++.| +|++.+=
T Consensus 209 ~~~~i~~i----------EqP~~~~d~~~~~~l~~~~-----~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k 266 (367)
T 3dg3_A 209 ADLDLLFA----------EELCPADDVLSRRRLVGQL-----DMPFIADESVPTPADVTREVLGGSATAISIK 266 (367)
T ss_dssp TTSCCSCE----------ESCSCTTSHHHHHHHHHHC-----SSCEEECTTCSSHHHHHHHHHHTSCSEEEEC
T ss_pred HHhCCCEE----------ECCCCcccHHHHHHHHHhC-----CCCEEecCCcCCHHHHHHHHHcCCCCEEEee
Confidence 2333 3666665566666666543 47999999987 77888887776 7888764
No 363
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=88.86 E-value=11 Score=34.93 Aligned_cols=181 Identities=10% Similarity=0.091 Sum_probs=106.0
Q ss_pred ceEeEEEec---cCccCHHHHHHHHHHcCCCeEEEEeeeCc--cccc---c----------------cCCHHHHHHcCcC
Q 023494 58 IIVSPSILS---ANFAKLGEQVKAVELAGCDWIHVDVMDGR--FVPN---I----------------TIGPLVVDALRPV 113 (281)
Q Consensus 58 ~~i~pSila---~D~~~l~~~l~~l~~~G~d~iHiDImDG~--fvpn---~----------------~~G~~~I~~ir~~ 113 (281)
..|.+-+-+ .|.....+.++.+.++|+|.+-.-.-.-. +.|. + .++.+..+.|+++
T Consensus 20 ~~iIAe~g~NH~gs~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~ 99 (349)
T 2wqp_A 20 PLIICEIGINHEGSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEY 99 (349)
T ss_dssp CEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHH
T ss_pred eEEEEecCCcccCCHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHH
Confidence 444444432 35555556667778899999877321110 0111 1 4677777777664
Q ss_pred ---CCCCeeEEEEecChhhHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHH---hhcc
Q 023494 114 ---TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIEC---VLDV 187 (281)
Q Consensus 114 ---t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~---~l~~ 187 (281)
.++++.. =+.|+. -++.+.+.|+|.+=+..-. ..+ ..+|+++-+.|+.+-+..... .++++.. ++..
T Consensus 100 ~~~~Gi~~~s--t~~d~~-svd~l~~~~v~~~KI~S~~--~~n-~~LL~~va~~gkPviLstGma-t~~Ei~~Ave~i~~ 172 (349)
T 2wqp_A 100 VESKGMIFIS--TLFSRA-AALRLQRMDIPAYKIGSGE--CNN-YPLIKLVASFGKPIILSTGMN-SIESIKKSVEIIRE 172 (349)
T ss_dssp HHHTTCEEEE--EECSHH-HHHHHHHHTCSCEEECGGG--TTC-HHHHHHHHTTCSCEEEECTTC-CHHHHHHHHHHHHH
T ss_pred HHHhCCeEEE--eeCCHH-HHHHHHhcCCCEEEECccc--ccC-HHHHHHHHhcCCeEEEECCCC-CHHHHHHHHHHHHH
Confidence 5555555 334543 4666778899999998764 233 468888888999999988887 4443333 3321
Q ss_pred --CCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEE-ecCCChhcHHHHHHcCCcEE
Q 023494 188 --VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEV-DGGVGPKNAYKVIEAGANAL 251 (281)
Q Consensus 188 --vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~V-DGGI~~e~i~~~~~aGAD~~ 251 (281)
.+++++.++ -++-- +...--|..|..+++..+ +++|.. |=..+.......+.+|||++
T Consensus 173 ~G~~iiLlhc~-s~Yp~-~~~~~nL~ai~~lk~~f~----~lpVg~sdHt~G~~~~~AAvAlGA~iI 233 (349)
T 2wqp_A 173 AGVPYALLHCT-NIYPT-PYEDVRLGGMNDLSEAFP----DAIIGLSDHTLDNYACLGAVALGGSIL 233 (349)
T ss_dssp HTCCEEEEECC-CCSSC-CGGGCCTHHHHHHHHHCT----TSEEEEECCSSSSHHHHHHHHHTCCEE
T ss_pred cCCCEEEEecc-CCCCC-ChhhcCHHHHHHHHHHCC----CCCEEeCCCCCcHHHHHHHHHhCCCEE
Confidence 377776544 12211 233334666777777642 356532 22233455566789999944
No 364
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=88.81 E-value=0.86 Score=39.06 Aligned_cols=208 Identities=14% Similarity=0.058 Sum_probs=112.1
Q ss_pred CceEeEEEecc-CccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEE---e--cChh--
Q 023494 57 DIIVSPSILSA-NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLM---I--VEPE-- 128 (281)
Q Consensus 57 ~~~i~pSila~-D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLm---v--~dp~-- 128 (281)
..+|+-+.++. .-..+++.++.+.+.|.+.+++..-+ ......+.++++-+..++.+.++-. . .||.
T Consensus 4 ~~~lg~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~-----~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~r 78 (275)
T 3qc0_A 4 VEGLSINLATIREQCGFAEAVDICLKHGITAIAPWRDQ-----VAAIGLGEAGRIVRANGLKLTGLCRGGFFPAPDASGR 78 (275)
T ss_dssp CTTEEEEGGGGTTTCCHHHHHHHHHHTTCCEEECBHHH-----HHHHCHHHHHHHHHHHTCEESCEEEEECCCCSSHHHH
T ss_pred cccceeeeeeccCCCCHHHHHHHHHHcCCCEEEecccc-----ccccCHHHHHHHHHHcCCceEEeecCCCcCCCCHHHH
Confidence 45688888888 66799999999999999998874211 0122333333332224554443321 1 2432
Q ss_pred --------hHHHHHHHcCCCEEEEcccccc-------------cccHHHHHHHHHHcCCcEEEEE-CC--------CCCH
Q 023494 129 --------QRVPDFIKAGADIVSVHCEQSS-------------TIHLHRTLNQIKDLGAKAGVVL-NP--------ATSL 178 (281)
Q Consensus 129 --------~~i~~~~~aGAd~Itvh~Ea~~-------------~~~i~~~l~~ik~~G~k~Glai-~p--------~t~i 178 (281)
+.++.+.+.|++.|.+|.-..+ .+.+.++.+.++++|+++++-- ++ -...
T Consensus 79 ~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~~~~~~~~~~~~~~ 158 (275)
T 3qc0_A 79 EKAIDDNRRAVDEAAELGADCLVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIEPLHPMYAADRACVNTL 158 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCEEEECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEECCCCGGGTTTTBSCCCH
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeECCCcccCCccccCCH
Confidence 2455667889999999852111 1235666777788999988863 32 1245
Q ss_pred HHHHHhhccCC-EEEEEeecCCCCCCccchhHHHHHHHHHH--Hhhh---cCC----------CCeEEEecCCChh-cHH
Q 023494 179 SAIECVLDVVD-LVLIMSVNPGFGGQSFIESQVKKISDLRR--MCLE---KGV----------NPWIEVDGGVGPK-NAY 241 (281)
Q Consensus 179 e~~~~~l~~vD-~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~--l~~~---~~~----------~~~I~VDGGI~~e-~i~ 241 (281)
+.+..+++.++ .+-+ +.++|-.-. .....+-|+++.. .+.. +.. ...+ =+|-|+.. -+.
T Consensus 159 ~~~~~l~~~~~~~vg~-~~D~~h~~~--~~d~~~~l~~~~~~~~i~~vH~~D~~~~~~~~~~~r~~~-G~G~id~~~~~~ 234 (275)
T 3qc0_A 159 GQALDICETLGPGVGV-AIDVYHVWW--DPDLANQIARAGKMKAILAHHICDWLVPTKDMLTDRGMM-GDGVIDLKGIRR 234 (275)
T ss_dssp HHHHHHHHHHCTTEEE-EEEHHHHTT--CTTHHHHHHHHHHTTCEEEEEECBCCSSCCCSSSBCBCT-TSSCCCHHHHHH
T ss_pred HHHHHHHHHhCcccEE-EEEhhhhee--CCCHHHHHHHcCccceEEEEEecCCCCCcccccCCCcCC-CCCccCHHHHHH
Confidence 56666777665 2322 233331100 1123344444431 2210 000 0011 14666744 456
Q ss_pred HHHHcCCcEEEEcccccCC-----CCHHHHHHHHHHhc
Q 023494 242 KVIEAGANALVAGSAVFGA-----KDYAEAIKGIKTSK 274 (281)
Q Consensus 242 ~~~~aGAD~~VvGSaIf~a-----~dp~~~~~~l~~~~ 274 (281)
.+.+.|.+..++= -++.. .||.+.+++-.+.+
T Consensus 235 ~L~~~gy~g~~~~-E~~~~~~~~~~~~~~~~~~~~~~l 271 (275)
T 3qc0_A 235 RIEAAGFHGAQEV-EIFSADNWWKRPADEVIATCVERY 271 (275)
T ss_dssp HHHHTTCCCCEEE-CCCBTTTGGGSCHHHHHHHHHHHH
T ss_pred HHHHcCCCceEEE-EecCccccccCCHHHHHHHHHHHh
Confidence 7778898864422 23333 57887777655544
No 365
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=88.81 E-value=12 Score=33.19 Aligned_cols=172 Identities=15% Similarity=0.077 Sum_probs=97.0
Q ss_pred ccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCH----HHHHHcCcC--CCCCeeEEEEecChhh---HHHHHHH
Q 023494 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGP----LVVDALRPV--TDLPLDVHLMIVEPEQ---RVPDFIK 136 (281)
Q Consensus 66 a~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~----~~I~~ir~~--t~~~idaHLmv~dp~~---~i~~~~~ 136 (281)
..|+..+++.++.+.+.|++-+-+ =|+.--..++.. ++++...+. -..|+.++.-.++..+ +.+.+.+
T Consensus 17 ~iD~~~l~~lv~~li~~Gv~gl~~---~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~ 93 (292)
T 2vc6_A 17 RIDEVALHDLVEWQIEEGSFGLVP---CGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQN 93 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCSEEET---TSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEE---CccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHH
Confidence 367788889999999999987532 232222223333 334444432 2478888887777654 4455678
Q ss_pred cCCCEEEEcccc---cccccHHHHHHHHHH-cCCcEEEEECC-----CCCHHHHHHhhc-cCCEEEEEeecCCCCCCccc
Q 023494 137 AGADIVSVHCEQ---SSTIHLHRTLNQIKD-LGAKAGVVLNP-----ATSLSAIECVLD-VVDLVLIMSVNPGFGGQSFI 206 (281)
Q Consensus 137 aGAd~Itvh~Ea---~~~~~i~~~l~~ik~-~G~k~Glai~p-----~t~ie~~~~~l~-~vD~IlvmsV~pG~~GQ~f~ 206 (281)
+|||.+.+..-. .+.+.+.+..+.+-+ .++.+.+=-+| +-+.+.+.++.+ ...++.+= +. .|
T Consensus 94 ~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiK--~s--~g---- 165 (292)
T 2vc6_A 94 AGADGVLIVSPYYNKPTQEGIYQHFKAIDAASTIPIIVYNIPGRSAIEIHVETLARIFEDCPNVKGVX--DA--TG---- 165 (292)
T ss_dssp TTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEE--EC--SC----
T ss_pred cCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHhhCCCEEEEe--cC--CC----
Confidence 899988775321 112233344434333 46666554333 235566777765 44444321 11 11
Q ss_pred hhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEccc
Q 023494 207 ESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSA 256 (281)
Q Consensus 207 ~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSa 256 (281)
.+.++.++++..+ .++.+ ..| +-+.+......|++.+|.|.+
T Consensus 166 --d~~~~~~~~~~~~---~~f~v-~~G--~d~~~~~~l~~G~~G~is~~~ 207 (292)
T 2vc6_A 166 --NLLRPSLERMACG---EDFNL-LTG--EDGTALGYMAHGGHGCISVTA 207 (292)
T ss_dssp --CTHHHHHHHHHSC---TTSEE-EES--CGGGHHHHHHTTCCEEEESGG
T ss_pred --CHHHHHHHHHHcC---CCEEE-EEC--chHHHHHHHHcCCCEEEecHH
Confidence 1345555554432 24554 344 344566778999999999955
No 366
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=88.74 E-value=12 Score=33.11 Aligned_cols=130 Identities=13% Similarity=0.178 Sum_probs=75.3
Q ss_pred CccCHHHHHHHHHHcCCCeEEEEeeeCccc------ccccCCHHHHHHcCcCCCCCeeEEEEecChh----hHHHHHHHc
Q 023494 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFV------PNITIGPLVVDALRPVTDLPLDVHLMIVEPE----QRVPDFIKA 137 (281)
Q Consensus 68 D~~~l~~~l~~l~~~G~d~iHiDImDG~fv------pn~~~G~~~I~~ir~~t~~~idaHLmv~dp~----~~i~~~~~a 137 (281)
++.++.++++.+.+.|++.+. +.++++. |+...=.++++.+++.++.. .+.+...+|. +.++.+.++
T Consensus 34 ~~e~i~~ei~~l~~~G~~ei~--l~g~~~~~yG~~~~~~~~l~~Ll~~l~~~~gi~-~ir~~~~~p~~l~~e~l~~l~~~ 110 (304)
T 2qgq_A 34 SIEDITREVEDLLKEGKKEII--LVAQDTTSYGIDLYRKQALPDLLRRLNSLNGEF-WIRVMYLHPDHLTEEIISAMLEL 110 (304)
T ss_dssp CHHHHHHHHHHHHHTTCCEEE--EECTTGGGTTHHHHSSCCHHHHHHHHHTSSSSC-EEEECCCCGGGCCHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHCCCcEEE--EEeEcccccCCCCCcHHHHHHHHHHHHhcCCCc-EEEEeeeecccCCHHHHHHHHhC
Confidence 445677778888778887653 3443221 11111245566666654432 3455556775 467888899
Q ss_pred C--CCEEEEcccccc------------cccHHHHHHHHHH--cCCcEEEEE--C-CCCCHHHHHHhhcc-----CCEEEE
Q 023494 138 G--ADIVSVHCEQSS------------TIHLHRTLNQIKD--LGAKAGVVL--N-PATSLSAIECVLDV-----VDLVLI 193 (281)
Q Consensus 138 G--Ad~Itvh~Ea~~------------~~~i~~~l~~ik~--~G~k~Glai--~-p~t~ie~~~~~l~~-----vD~Ilv 193 (281)
| ++.+++..++.+ .++..+.++.+++ .|+.+...+ . |+...+.+++.++. +|.+.+
T Consensus 111 g~~~~~l~i~lqs~s~~vl~~m~r~~t~e~~~~~i~~l~~~~~gi~i~~~~IvG~PgEt~ed~~~t~~~l~~l~~~~v~~ 190 (304)
T 2qgq_A 111 DKVVKYFDVPVQHGSDKILKLMGRTKSSEELKKMLSSIRERFPDAVLRTSIIVGFPGETEEDFEELKQFVEEIQFDKLGA 190 (304)
T ss_dssp TTBCCEEECCCBCSCHHHHHHTTCCSCHHHHHHHHHHHHHHCTTCEEEEEEEECCTTCCHHHHHHHHHHHHHHCCSEEEE
T ss_pred CCCccEEEEecccCCHHHHHHhCCCCCHHHHHHHHHHHHhhCCCCEEEEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 9 899999887641 1235567778888 687776543 2 55555555554432 577666
Q ss_pred Eee--cCCC
Q 023494 194 MSV--NPGF 200 (281)
Q Consensus 194 msV--~pG~ 200 (281)
... .||.
T Consensus 191 ~~~~p~pgT 199 (304)
T 2qgq_A 191 FVYSDEEGT 199 (304)
T ss_dssp EECCC----
T ss_pred EEeeCCCCC
Confidence 543 5565
No 367
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=88.63 E-value=1.5 Score=38.72 Aligned_cols=144 Identities=15% Similarity=0.182 Sum_probs=81.2
Q ss_pred eeEEEEecChh---hHHHHHHHcCCCEEEEccccc---cccc-HHHHHHHHHHcC--CcEEEEECCCCCHHHHHHhhc-c
Q 023494 118 LDVHLMIVEPE---QRVPDFIKAGADIVSVHCEQS---STIH-LHRTLNQIKDLG--AKAGVVLNPATSLSAIECVLD-V 187 (281)
Q Consensus 118 idaHLmv~dp~---~~i~~~~~aGAd~Itvh~Ea~---~~~~-i~~~l~~ik~~G--~k~Glai~p~t~ie~~~~~l~-~ 187 (281)
+---++..|.. +.++.+.++|+|++++=.-.. +.-+ =..+++.+|+.. +..-+-+...+|...++.+.+ .
T Consensus 30 i~pSilsaD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv~~p~~~i~~~~~aG 109 (246)
T 3inp_A 30 INPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPVDALIESFAKAG 109 (246)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCSCEEEEEECSSCHHHHHHHHHHT
T ss_pred eehhhhcCChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCCeEEEEEeeCCHHHHHHHHHHcC
Confidence 34444555654 456777889999999832211 1111 125788888875 556666777788777777766 4
Q ss_pred CCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEccc--ccCC----C
Q 023494 188 VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSA--VFGA----K 261 (281)
Q Consensus 188 vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSa--If~a----~ 261 (281)
+|+|.+.. +. .. ...+-++++| +.|...-+.+-.+-..+.+..+.+ ++|.+.+.|- =|+. +
T Consensus 110 Ad~itvH~-Ea---~~----~~~~~i~~ir----~~G~k~Gvalnp~Tp~e~l~~~l~-~vD~VlvMsV~PGfgGQ~fi~ 176 (246)
T 3inp_A 110 ATSIVFHP-EA---SE----HIDRSLQLIK----SFGIQAGLALNPATGIDCLKYVES-NIDRVLIMSVNPGFGGQKFIP 176 (246)
T ss_dssp CSEEEECG-GG---CS----CHHHHHHHHH----TTTSEEEEEECTTCCSGGGTTTGG-GCSEEEEECSCTTC--CCCCT
T ss_pred CCEEEEcc-cc---ch----hHHHHHHHHH----HcCCeEEEEecCCCCHHHHHHHHh-cCCEEEEeeecCCCCCcccch
Confidence 89997641 11 11 1122233332 334333455555555667777666 6898876542 2321 3
Q ss_pred CHHHHHHHHHHhc
Q 023494 262 DYAEAIKGIKTSK 274 (281)
Q Consensus 262 dp~~~~~~l~~~~ 274 (281)
+.-+.++++++.+
T Consensus 177 ~~l~KI~~lr~~~ 189 (246)
T 3inp_A 177 AMLDKAKEISKWI 189 (246)
T ss_dssp THHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4455666776654
No 368
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=88.54 E-value=1.2 Score=40.00 Aligned_cols=99 Identities=13% Similarity=0.170 Sum_probs=60.7
Q ss_pred CccCHHHHHHHHHHcCCCeEEEEeee--CcccccccCCHHHHHHcCcCC-CCCeeEEEEec--ChhhHHHHHHHcCCCEE
Q 023494 68 NFAKLGEQVKAVELAGCDWIHVDVMD--GRFVPNITIGPLVVDALRPVT-DLPLDVHLMIV--EPEQRVPDFIKAGADIV 142 (281)
Q Consensus 68 D~~~l~~~l~~l~~~G~d~iHiDImD--G~fvpn~~~G~~~I~~ir~~t-~~~idaHLmv~--dp~~~i~~~~~aGAd~I 142 (281)
|+..+.+.++.+.+.|+|.| -+.| |...|... .+.++.|++.. +.++.+|.==. -+..-...+.++|++.|
T Consensus 157 ~~~~~~~~~~~~~~~G~d~i--~l~DT~G~~~P~~~--~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~~v 232 (302)
T 2ftp_A 157 DPRQVAWVARELQQMGCYEV--SLGDTIGVGTAGAT--RRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAVF 232 (302)
T ss_dssp CHHHHHHHHHHHHHTTCSEE--EEEESSSCCCHHHH--HHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEE
T ss_pred CHHHHHHHHHHHHHcCCCEE--EEeCCCCCcCHHHH--HHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEE
Confidence 44455566666779999986 4456 54455432 35677888764 67888887332 22223445678999988
Q ss_pred EEcc----c------ccccccHHHHHHHHHHcCCcEEE
Q 023494 143 SVHC----E------QSSTIHLHRTLNQIKDLGAKAGV 170 (281)
Q Consensus 143 tvh~----E------a~~~~~i~~~l~~ik~~G~k~Gl 170 (281)
-.-. | .......++++..+++.|...|+
T Consensus 233 d~tv~GlG~cp~a~gr~GN~~~E~lv~~l~~~g~~~~i 270 (302)
T 2ftp_A 233 DSSVAGLGGCPYAKGATGNVASEDVLYLLNGLEIHTGV 270 (302)
T ss_dssp EEBGGGCCBCGGGTTCBCBCBHHHHHHHHHHTTCBCCC
T ss_pred EecccccCCCCCCCCCCCChhHHHHHHHHHhcCCCCCc
Confidence 7653 3 11234466677777777666544
No 369
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=88.51 E-value=7.8 Score=36.80 Aligned_cols=195 Identities=13% Similarity=0.083 Sum_probs=111.9
Q ss_pred eEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCc------cccc-ccCCHHHHHHcCcCCCCC---eeEEEEecChh--
Q 023494 61 SPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGR------FVPN-ITIGPLVVDALRPVTDLP---LDVHLMIVEPE-- 128 (281)
Q Consensus 61 ~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~------fvpn-~~~G~~~I~~ir~~t~~~---idaHLmv~dp~-- 128 (281)
.+++-+.++..++-.++.+++.+...| +-+-.+. |..- ...-..+++.+-+..+.| +-+||==-.|.
T Consensus 16 v~afn~~n~e~i~Ail~aAee~~sPVI-i~~s~~~v~~~gGY~g~~~~~~~~~v~~~A~~~~vP~~~VaLHlDHg~~~~w 94 (420)
T 2fiq_A 16 ICSVCSAHPLVIEAALAFDRNSTRKVL-IEATSNQVNQFGGYTGMTPADFREFVFAIADKVGFARERIILGGDHLGPNCW 94 (420)
T ss_dssp EEEECCCCHHHHHHHHHHTTTSCCCEE-EEEETTTBSTTCTTTTBCHHHHHHHHHHHHHHHTCCGGGEEEEEEEESSGGG
T ss_pred EEEeccCCHHHHHHHHHHHHHcCCCEE-EEcChhhhhhccCCCCCCHHHHHHHHHHHHHHcCcCcceEEEECCCCCCccc
Confidence 456666666677777777877777664 5444332 3310 000013344333334566 88888665554
Q ss_pred -------------hHHHHHHHcCCCEEEEcccc------cc-cccH-----HHHHHHHHHcCCc------EEEE------
Q 023494 129 -------------QRVPDFIKAGADIVSVHCEQ------SS-TIHL-----HRTLNQIKDLGAK------AGVV------ 171 (281)
Q Consensus 129 -------------~~i~~~~~aGAd~Itvh~Ea------~~-~~~i-----~~~l~~ik~~G~k------~Gla------ 171 (281)
..+..++++|.+.|.+=+-. .+ .+++ .++.+.+++. .. +|-.
T Consensus 95 ~~~~~~~am~~a~e~i~~aI~aGFtSVMiD~S~~~~~~~~pl~eNi~~~rt~elv~~Ah~~-~~~~~eaElG~vgG~Ev~ 173 (420)
T 2fiq_A 95 QQENVDAAMEKSVELVKAYVRAGFSKIHLDASMSCAGDPIPLAPETVAERAAVLCFAAESV-ATDCQREQLSYVIGTEVP 173 (420)
T ss_dssp TTSBHHHHHHHHHHHHHHHHHTTCCEEEECCCSCCBTCCSSCCHHHHHHHHHHHHHHHHHH-CCHHHHHHCEEEEECSSC
T ss_pred cccchhhhhhhHHHHHHHHHHhCCCEEEECCCCCCCCCCCCccHHHHHHHHHHHHHHHHHH-cccCCcccceEEeeeecC
Confidence 56888999998877765432 11 2233 4557777775 21 1111
Q ss_pred --------EC--CCCCHHHHHHhhc-------c--CCE----EEEEeecCCCC-CCc-cchhHHHHHHHHHHHhhhcCCC
Q 023494 172 --------LN--PATSLSAIECVLD-------V--VDL----VLIMSVNPGFG-GQS-FIESQVKKISDLRRMCLEKGVN 226 (281)
Q Consensus 172 --------i~--p~t~ie~~~~~l~-------~--vD~----IlvmsV~pG~~-GQ~-f~~~~l~kI~~lr~l~~~~~~~ 226 (281)
.. .-|..+..+++++ . +|. |.-+.|.+|.. |.. -..--+++++++++.++. ++
T Consensus 174 v~~~~~~~~~~~~~T~PeeA~~Fve~~~~~~~~tGvd~~~~~vi~LAV~iGt~HG~y~~~~ld~e~l~~I~~~v~~--P~ 251 (420)
T 2fiq_A 174 VPGGEASAIQSVHITHVEDAANTLRTHQKAFIARGLTEALTRVIAIVVQPGVEFDHSNIIHYQPQEAQALAQWIEN--TR 251 (420)
T ss_dssp C----------CCCCCHHHHHHHHHHHHHHHHTTTCHHHHHTEEEEECCCSCEECSSCEECCCGGGGHHHHHHHTT--SS
T ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHHHhhCCCcccccceEEEEeCCccCCCCCCCCcCHHHHHHHHHhcCC--CC
Confidence 11 1377777777775 3 565 33345667752 211 112225566777777642 11
Q ss_pred CeEEEec--CCChhcHHHHHHcCCcEEEEcccccC
Q 023494 227 PWIEVDG--GVGPKNAYKVIEAGANALVAGSAVFG 259 (281)
Q Consensus 227 ~~I~VDG--GI~~e~i~~~~~aGAD~~VvGSaIf~ 259 (281)
+-++-=| |++.+.++++++.|...+=+|+.+..
T Consensus 252 LVle~HGgSg~~~e~l~~~v~~Gi~kiNV~t~l~~ 286 (420)
T 2fiq_A 252 MVYEAHSTDYQTRTAYWELVRDHFAILKVGPALTF 286 (420)
T ss_dssp CEEEESCCTTCCHHHHHHHHHTTEEEEEECHHHHH
T ss_pred EEEecCCCCCCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 2232234 57789999999999999999988764
No 370
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=88.47 E-value=0.74 Score=42.94 Aligned_cols=114 Identities=15% Similarity=0.180 Sum_probs=75.3
Q ss_pred cChhhHHHH---HHHcCCCEEEEcccccccccHHHHHHHHHHc---CCcEEEEECCCCCHHHHHHhhcc-----CCEEEE
Q 023494 125 VEPEQRVPD---FIKAGADIVSVHCEQSSTIHLHRTLNQIKDL---GAKAGVVLNPATSLSAIECVLDV-----VDLVLI 193 (281)
Q Consensus 125 ~dp~~~i~~---~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~---G~k~Glai~p~t~ie~~~~~l~~-----vD~Ilv 193 (281)
.+|+.+.+. +.+.|.+.+=+|.-. +.+...+.++++|+. ++.+.+..|.....+...++++. +++|
T Consensus 144 ~~~e~~~~~a~~~~~~Gf~~vKik~g~-~~~~~~e~v~avR~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i-- 220 (397)
T 2qde_A 144 GEPEAVAEEALAVLREGFHFVKLKAGG-PLKADIAMVAEVRRAVGDDVDLFIDINGAWTYDQALTTIRALEKYNLSKI-- 220 (397)
T ss_dssp SCHHHHHHHHHHHHHHTCSCEEEECCS-CHHHHHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGGGCCSCE--
T ss_pred CCHHHHHHHHHHHHHhhhhheeecccC-CHHHHHHHHHHHHHhhCCCCEEEEECCCCCCHHHHHHHHHHHHhCCCCEE--
Confidence 577766543 467899999999643 223345677788775 46778888877777665555432 3433
Q ss_pred EeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEEc
Q 023494 194 MSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVAG 254 (281)
Q Consensus 194 msV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~VvG 254 (281)
.|++.+..++-.+++++. .+++|..|+.+. ++.+..+++.| +|++.+-
T Consensus 221 --------EqP~~~~~~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 270 (397)
T 2qde_A 221 --------EQPLPAWDLDGMARLRGK-----VATPIYADESAQELHDLLAIINKGAADGLMIK 270 (397)
T ss_dssp --------ECCSCTTCHHHHHHHHTT-----CSSCEEESTTCCSHHHHHHHHHHTCCSEEEEC
T ss_pred --------ECCCChhhHHHHHHHHhh-----CCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEe
Confidence 255555555555555543 357899999986 77888887765 7888763
No 371
>3lot_A Uncharacterized protein; protein of unknown function, structural genomics, joint CENT structural genomics, JCSG; HET: MSE; 1.89A {Archaeoglobus fulgidus}
Probab=88.35 E-value=3.2 Score=37.96 Aligned_cols=195 Identities=15% Similarity=0.176 Sum_probs=109.4
Q ss_pred CHHHHHHHHHHcCCCeEEEEeee---CcccccccCCHHHHHHcCcCCCCCeeEEEEec-------ChhhHHHHHHHcCCC
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMD---GRFVPNITIGPLVVDALRPVTDLPLDVHLMIV-------EPEQRVPDFIKAGAD 140 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImD---G~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~-------dp~~~i~~~~~aGAd 140 (281)
.+.++...+.++|+..+|+-+-| |.=......--++++.||+.++ +.+.+-+. +++.-+....+...|
T Consensus 33 Eia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~y~e~i~~IR~~~d--~iI~~TTgg~~~~~~~~eeR~~~~~~~~Pe 110 (314)
T 3lot_A 33 QIVEEAVKAAEAGAGMVHIHARDPKDGRPTTDVEVFRYICREIKKQSD--VVINVTTGGGGTLGIPVEERAKVVPALKPE 110 (314)
T ss_dssp HHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHHHCC--CEEEECSSTTGGGTCCHHHHTTHHHHHCCS
T ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCcCCCHHHHHHHHHHHHhcCC--eEEEeCCCCcCCCCCCHHHHHHHHHhcCCc
Confidence 44555566778999999998876 5322223344568888888765 33434332 333333334456778
Q ss_pred EEEEccccc---------------------------------ccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhcc
Q 023494 141 IVSVHCEQS---------------------------------STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV 187 (281)
Q Consensus 141 ~Itvh~Ea~---------------------------------~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~ 187 (281)
+.++-.-+. +...+.++++.++++|+++-+.+-....+..+..+++.
T Consensus 111 ~aSln~Gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~~~v~~N~~~~i~~~~~~~~e~Gi~pE~e~fd~g~l~~~~~l~~~ 190 (314)
T 3lot_A 111 IATFNMGSMNFAIHPLLKKYKEFKYDWEPEYLEMTRDIVFRNTFKDLEALSRIFKENDTKPELECYDIGQIYNTAFMFHE 190 (314)
T ss_dssp EEEEECCCEECBCTTHHHHCCCCSSTHHHHHHHHGGGCEECCCHHHHHHHHHHHHHHTCEEEEEECSHHHHHHHHHHHHT
T ss_pred eeeecCCCcccccccccccccccccccchhhcccCCCceecCCHHHHHHHHHHHHHcCCEEEEEEECHHHHHHHHHHHHC
Confidence 887765110 13358888999999999999988643445555555543
Q ss_pred ------CCEEEEEeecCCCCCCccchhHHHHHHH-HHHHhhhcCCCCeEEEecCCChh---cHHHHHHcCCcEEEEc--c
Q 023494 188 ------VDLVLIMSVNPGFGGQSFIESQVKKISD-LRRMCLEKGVNPWIEVDGGVGPK---NAYKVIEAGANALVAG--S 255 (281)
Q Consensus 188 ------vD~IlvmsV~pG~~GQ~f~~~~l~kI~~-lr~l~~~~~~~~~I~VDGGI~~e---~i~~~~~aGAD~~VvG--S 255 (281)
..+-+||++. +|++-.|+.+.-..+ +.++.... +....| -|+... -....+..|-+ +=|| =
T Consensus 191 Gll~~p~~~~~VlGv~---~G~~~~p~~L~~~~~~~~~l~~~~--~~~Wsv-~g~Gr~q~p~~~~A~~~GGh-vRVGlED 263 (314)
T 3lot_A 191 GYLEPPLRLQFIHGIL---GGIGTAVEDVLFMKQTADRLIGRE--NYTWSL-VGAGRFQMPLGTLAVIMGGD-VRVGLED 263 (314)
T ss_dssp TCSCSSEEEEEEECCB---TSCCCCHHHHHHHHHHHHHHTCGG--GEEEEE-EECGGGHHHHHHHHHHTTCE-EEESTTT
T ss_pred CCCCCCceEEEEecCC---CCCCCCHHHHHHHHHHhhhccCCC--CCeEEE-EecChhhHHHHHHHHHcCCc-eEEccCc
Confidence 2233456552 356666666554432 22333211 233333 333333 34456888988 5667 2
Q ss_pred cccC-----CCCHHHHHHHHHHhc
Q 023494 256 AVFG-----AKDYAEAIKGIKTSK 274 (281)
Q Consensus 256 aIf~-----a~dp~~~~~~l~~~~ 274 (281)
.++- +++-.+.++++.+.+
T Consensus 264 nl~~~~G~lA~sNa~lV~~~~~i~ 287 (314)
T 3lot_A 264 SLYIERGKLAKSNAEQVEKMVRIV 287 (314)
T ss_dssp CSEEETTEECSCHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCHHHHHHHHHHHH
Confidence 2442 234455555555543
No 372
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=88.29 E-value=4.7 Score=31.78 Aligned_cols=101 Identities=17% Similarity=0.201 Sum_probs=54.3
Q ss_pred HHHHHcCCcEEEEECCCCCHHHHHHhhc--cCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCC-CCeEEEecCC
Q 023494 159 NQIKDLGAKAGVVLNPATSLSAIECVLD--VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGV-NPWIEVDGGV 235 (281)
Q Consensus 159 ~~ik~~G~k~Glai~p~t~ie~~~~~l~--~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~-~~~I~VDGGI 235 (281)
..++.+|.++- .+.+..|.+.+.+.+. .+|.|.+-+.. +. ....++++.+.+.+.+. +++|.|.|..
T Consensus 25 ~~l~~~G~~Vi-~lG~~~p~e~~v~~a~~~~~d~v~lS~~~-~~--------~~~~~~~~i~~l~~~g~~~i~v~vGG~~ 94 (137)
T 1ccw_A 25 HAFTNAGFNVV-NIGVLSPQELFIKAAIETKADAILVSSLY-GQ--------GEIDCKGLRQKCDEAGLEGILLYVGGNI 94 (137)
T ss_dssp HHHHHTTCEEE-EEEEEECHHHHHHHHHHHTCSEEEEEECS-ST--------HHHHHTTHHHHHHHTTCTTCEEEEEESC
T ss_pred HHHHHCCCEEE-ECCCCCCHHHHHHHHHhcCCCEEEEEecC-cC--------cHHHHHHHHHHHHhcCCCCCEEEEECCC
Confidence 44566777654 2222346655554433 47888764433 11 11222222333333333 5778777653
Q ss_pred --ChhcH----HHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhc
Q 023494 236 --GPKNA----YKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSK 274 (281)
Q Consensus 236 --~~e~i----~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~ 274 (281)
..+.. ..+.++|+|.+.- ...++.+.++.+++.+
T Consensus 95 ~~~~~~~~~~~~~~~~~G~d~~~~-----~g~~~~~~~~~l~~~~ 134 (137)
T 1ccw_A 95 VVGKQHWPDVEKRFKDMGYDRVYA-----PGTPPEVGIADLKKDL 134 (137)
T ss_dssp SSSSCCHHHHHHHHHHTTCSEECC-----TTCCHHHHHHHHHHHH
T ss_pred cCchHhhhhhHHHHHHCCCCEEEC-----CCCCHHHHHHHHHHHh
Confidence 34444 3489999996642 2357778888887654
No 373
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=88.23 E-value=1.7 Score=40.17 Aligned_cols=117 Identities=12% Similarity=0.070 Sum_probs=76.3
Q ss_pred cChhhHHH---HHHHcCCCEEEEcccccccccHHHHHHHHHHc-C--CcEEEEECCCCCHHHHHHhhcc---CCEEEEEe
Q 023494 125 VEPEQRVP---DFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL-G--AKAGVVLNPATSLSAIECVLDV---VDLVLIMS 195 (281)
Q Consensus 125 ~dp~~~i~---~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~-G--~k~Glai~p~t~ie~~~~~l~~---vD~Ilvms 195 (281)
.+|+.+.+ .+.++|.+.+=+|.-. +.....+.++++|+. | +.+.+..|.....+...++++. .+. .+
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i-~i-- 219 (379)
T 2rdx_A 144 RSEAETRAELARHRAAGYRQFQIKVGA-DWQSDIDRIRACLPLLEPGEKAMADANQGWRVDNAIRLARATRDLDY-IL-- 219 (379)
T ss_dssp SCSHHHHHHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHHGGGSCTTCEEEEECTTCSCHHHHHHHHHHTTTSCC-EE--
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccC-CHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhCCe-EE--
Confidence 57776654 4567899999999753 133345777888764 4 6778888877777766565543 333 22
Q ss_pred ecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEEccccc
Q 023494 196 VNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVAGSAVF 258 (281)
Q Consensus 196 V~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~VvGSaIf 258 (281)
+ |++. .++-.+++++. .+++|..|+.++ ++.+.++++.| +|++.+.-.-.
T Consensus 220 -E-----~P~~--~~~~~~~l~~~-----~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~ 271 (379)
T 2rdx_A 220 -E-----QPCR--SYEECQQVRRV-----ADQPMKLDECVTGLHMAQRIVADRGAEICCLKISNL 271 (379)
T ss_dssp -E-----CCSS--SHHHHHHHHTT-----CCSCEEECTTCCSHHHHHHHHHHTCCSEEEEETTTT
T ss_pred -e-----CCcC--CHHHHHHHHhh-----CCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEecccc
Confidence 2 3332 34444444432 358999999996 77888887766 89998865443
No 374
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=88.23 E-value=3 Score=36.20 Aligned_cols=141 Identities=9% Similarity=0.119 Sum_probs=78.8
Q ss_pred EecChh---hHHHHHHHcCCCEEEEccccc---ccccH-HHHHHHHHHcC--CcEEEEECCCCCHHHHHHhhccCCEEEE
Q 023494 123 MIVEPE---QRVPDFIKAGADIVSVHCEQS---STIHL-HRTLNQIKDLG--AKAGVVLNPATSLSAIECVLDVVDLVLI 193 (281)
Q Consensus 123 mv~dp~---~~i~~~~~aGAd~Itvh~Ea~---~~~~i-~~~l~~ik~~G--~k~Glai~p~t~ie~~~~~l~~vD~Ilv 193 (281)
+..|.. +.++.+.++|+|++++=.-.. +..+. ...++.+|+.- ....+-+.-..|...++.+.+ +|++.+
T Consensus 13 la~D~~~l~~~i~~~~~~g~d~iHvDvmDg~fvpn~t~G~~~v~~lr~~~p~~~~dvhLmv~dp~~~i~~~~~-Ad~itv 91 (227)
T 1tqx_A 13 LASNISKLAEETQRMESLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKYTKSIFFDVHLMVEYPEKYVPLLKT-SNQLTF 91 (227)
T ss_dssp GGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCCCHHHHHHHGGGCSSCEEEEEEESSCGGGGGGGCTT-SSEEEE
T ss_pred hcCChhhHHHHHHHHHHcCCCEEEEEEEeCCcCcchhcCHHHHHHHHHhCCCCcEEEEEEEcCHHHHHHHHHh-CCEEEE
Confidence 444543 346667788999987764321 11121 36888888873 666666666667766666666 999866
Q ss_pred EeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEec--CCChhcHHHHHHcC-CcEEEEccc--cc-CC---CCHH
Q 023494 194 MSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDG--GVGPKNAYKVIEAG-ANALVAGSA--VF-GA---KDYA 264 (281)
Q Consensus 194 msV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDG--GI~~e~i~~~~~aG-AD~~VvGSa--If-~a---~dp~ 264 (281)
+ .+... ..+.+.-++...+.+.| .++.|+= +-..+.+..+.+.| +|.+.++|- =| +. +..-
T Consensus 92 H---~ea~~-----~~~~~~i~~~~~i~~~G--~k~gvalnp~tp~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l 161 (227)
T 1tqx_A 92 H---FEALN-----EDTERCIQLAKEIRDNN--LWCGISIKPKTDVQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMM 161 (227)
T ss_dssp E---GGGGT-----TCHHHHHHHHHHHHTTT--CEEEEEECTTSCGGGGHHHHTTTCCSEEEEESSCTTCSSCCCCGGGH
T ss_pred e---ecCCc-----cCHHHHHHHHHHHHHcC--CeEEEEeCCCCcHHHHHHHhhcCCcCEEEEeeeccCCCCcccchHHH
Confidence 4 32211 01222211111333333 4555543 33356788888876 999987763 12 22 2334
Q ss_pred HHHHHHHHhc
Q 023494 265 EAIKGIKTSK 274 (281)
Q Consensus 265 ~~~~~l~~~~ 274 (281)
+.++++++..
T Consensus 162 ~ki~~lr~~~ 171 (227)
T 1tqx_A 162 GKVSFLRKKY 171 (227)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhc
Confidence 5566666654
No 375
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=88.21 E-value=4.3 Score=35.82 Aligned_cols=75 Identities=20% Similarity=0.323 Sum_probs=53.2
Q ss_pred CeeEEEEe-cChhhHHHHHHHcCCCEEEEcccccc--cccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhc-cCCEEE
Q 023494 117 PLDVHLMI-VEPEQRVPDFIKAGADIVSVHCEQSS--TIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD-VVDLVL 192 (281)
Q Consensus 117 ~idaHLmv-~dp~~~i~~~~~aGAd~Itvh~Ea~~--~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~-~vD~Il 192 (281)
.+-..+.+ .+|. .++++..+|+|+|.+=.|... .+.+...++.++..|..+.|=+|+.++ ..++..++ .+|.|+
T Consensus 16 ~~g~~~~~~~~p~-~~e~a~~~g~D~vilDlEhav~~~~k~~~~l~a~~~~~~~~~VRVn~~~~-~di~~~ld~G~~gI~ 93 (261)
T 3qz6_A 16 VVGTMLNLVYNPD-IVRIYAEAGLDYFIVDCEHAAYTFREINHLVSVAKNAGVSVLVRIPQVDR-AHVQRLLDIGAEGFM 93 (261)
T ss_dssp EEEEEESSCCCTT-HHHHHHHTTCSEEEEESSSSCCCHHHHHHHHHHHHHHTCEEEEECSSCCH-HHHHHHHHHTCCEEE
T ss_pred EEEEEEecCCCHH-HHHHHhcCCcCEEEEeccCCCCCHHHHHHHHHHHhhcCCeEEEEeCCCCH-HHHHHHHhcCCCEEE
Confidence 45666667 7776 678888999999999999741 223455566666678888888887766 45666665 478776
Q ss_pred E
Q 023494 193 I 193 (281)
Q Consensus 193 v 193 (281)
+
T Consensus 94 l 94 (261)
T 3qz6_A 94 I 94 (261)
T ss_dssp E
T ss_pred E
Confidence 5
No 376
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=88.17 E-value=1.7 Score=39.77 Aligned_cols=93 Identities=17% Similarity=0.151 Sum_probs=50.8
Q ss_pred CHHHHHHHHHHcCCCeEEEEeeeCccccc--ccCC------HHHHHHcCcCC-CCCeeEEEEecChhhHHHHHHHcCCCE
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPN--ITIG------PLVVDALRPVT-DLPLDVHLMIVEPEQRVPDFIKAGADI 141 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImDG~fvpn--~~~G------~~~I~~ir~~t-~~~idaHLmv~dp~~~i~~~~~aGAd~ 141 (281)
...+..+.+.+.|+|+|-|.-. ..=|. ++.. ..+|+.|++.. +.++-+ =+.+|+ .++.+.++||++
T Consensus 66 ~a~~~A~~~v~~GAdIIDIGge--STrPG~~v~~~eEl~Rv~pvI~~l~~~~~~vpISI--DT~~~~-VaeaAl~aGa~i 140 (318)
T 2vp8_A 66 AARDAVHRAVADGADVIDVGGV--KAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISV--DTWRAQ-VAKAACAAGADL 140 (318)
T ss_dssp HHHHHHHHHHHTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHSTTCEEEE--ECSCHH-HHHHHHHHTCCE
T ss_pred HHHHHHHHHHHCCCCEEEECCC--cCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEEE--eCCCHH-HHHHHHHhCCCE
Confidence 3344455667789998644211 11122 1111 22356666543 556544 445655 677888899998
Q ss_pred EE-EcccccccccHHHHHHHHHHcCCcEEEEEC
Q 023494 142 VS-VHCEQSSTIHLHRTLNQIKDLGAKAGVVLN 173 (281)
Q Consensus 142 It-vh~Ea~~~~~i~~~l~~ik~~G~k~Glai~ 173 (281)
|- +..+. ..+.+..++++|+.+.+.-+
T Consensus 141 INDVsg~~-----d~~m~~vaa~~g~~vVlmh~ 168 (318)
T 2vp8_A 141 INDTWGGV-----DPAMPEVAAEFGAGLVCAHT 168 (318)
T ss_dssp EEETTSSS-----STTHHHHHHHHTCEEEEECC
T ss_pred EEECCCCC-----chHHHHHHHHhCCCEEEECC
Confidence 74 33331 22567778889987777654
No 377
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=88.06 E-value=2 Score=39.52 Aligned_cols=122 Identities=17% Similarity=0.125 Sum_probs=77.5
Q ss_pred CCeeEEEEecChhhHHHH---HHHcCCCEEEEcccccccccHHHHHHHHHHc---CCcEEEEECCCCCHHHHHHhhccC-
Q 023494 116 LPLDVHLMIVEPEQRVPD---FIKAGADIVSVHCEQSSTIHLHRTLNQIKDL---GAKAGVVLNPATSLSAIECVLDVV- 188 (281)
Q Consensus 116 ~~idaHLmv~dp~~~i~~---~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~---G~k~Glai~p~t~ie~~~~~l~~v- 188 (281)
.|....+-..+|+.+.+. +.+.|.+.+=+|.-. +.....+.++++|+. ++.+.+..|.....+...++++..
T Consensus 136 vp~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~ 214 (371)
T 2ps2_A 136 LPLISSIYVGEPEDMRARVAKYRAKGYKGQSVKISG-EPVTDAKRITAALANQQPDEFFIVDANGKLSVETALRLLRLLP 214 (371)
T ss_dssp EEBEEEECSCCHHHHHHHHHHHHTTTCCEEEEECCS-CHHHHHHHHHHHTTTCCTTCEEEEECTTBCCHHHHHHHHHHSC
T ss_pred eEEEEEeCCCCHHHHHHHHHHHHHhChheEEeecCC-CHHHHHHHHHHHHHhcCCCCEEEEECCCCcCHHHHHHHHHHHH
Confidence 455555545688776543 467899999999753 233345677788773 466777788777776665554433
Q ss_pred ---CEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEEc
Q 023494 189 ---DLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVAG 254 (281)
Q Consensus 189 ---D~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~VvG 254 (281)
+. .+ + |++. .++-.+++++. .+++|..|+.++ ++.+.++++.| +|++.+-
T Consensus 215 ~~~~i-~i---E-----~P~~--~~~~~~~l~~~-----~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik 269 (371)
T 2ps2_A 215 HGLDF-AL---E-----APCA--TWRECISLRRK-----TDIPIIYDELATNEMSIVKILADDAAEGIDLK 269 (371)
T ss_dssp TTCCC-EE---E-----CCBS--SHHHHHHHHTT-----CCSCEEESTTCCSHHHHHHHHHHTCCSEEEEE
T ss_pred hhcCC-cC---c-----CCcC--CHHHHHHHHhh-----CCCCEEeCCCcCCHHHHHHHHHhCCCCEEEec
Confidence 32 22 2 3332 23444444432 358999999986 77888887776 7988774
No 378
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=87.88 E-value=3.9 Score=38.36 Aligned_cols=117 Identities=11% Similarity=0.059 Sum_probs=75.9
Q ss_pred cChhhHHHHHHHcCCCEEEEccc------c----c--ccccHHHHHHHHHHc---CCcEEEEECCCCCHHHHHHhhcc--
Q 023494 125 VEPEQRVPDFIKAGADIVSVHCE------Q----S--STIHLHRTLNQIKDL---GAKAGVVLNPATSLSAIECVLDV-- 187 (281)
Q Consensus 125 ~dp~~~i~~~~~aGAd~Itvh~E------a----~--~~~~i~~~l~~ik~~---G~k~Glai~p~t~ie~~~~~l~~-- 187 (281)
.+|.+.++.+.+.|...+=++.- . . ..+...+.++++|+. ++.+.+..|.....+....+++.
T Consensus 158 ~~~~~~a~~~~~~G~~~~K~~~~~~~~~K~G~~~~~~~~~~d~e~v~avR~a~g~d~~l~vDaN~~~~~~~A~~~~~~L~ 237 (410)
T 3dip_A 158 RDAGVLAESLVAEGYAAMKIWPFDDFASITPHHISLTDLKDGLEPFRKIRAAVGQRIEIMCELHSLWGTHAAARICNALA 237 (410)
T ss_dssp -CHHHHHHHHHHTTCSEEEECTTHHHHTTCTTCCCHHHHHHHHHHHHHHHHHHTTSSEEEEECTTCBCHHHHHHHHHHGG
T ss_pred hhHHHHHHHHHHcCCCEEEECCccCccccccCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHHH
Confidence 34555667778899999998421 0 0 011234567777764 46788888888888766555432
Q ss_pred ---CCEEEEEeecCCCCCCc-cchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEEccc
Q 023494 188 ---VDLVLIMSVNPGFGGQS-FIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVAGSA 256 (281)
Q Consensus 188 ---vD~IlvmsV~pG~~GQ~-f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~VvGSa 256 (281)
+++| .|+ +.+..++-.+++++.. +++|+.|+.+. ++.+..+++.| +|++.+--.
T Consensus 238 ~~~i~~i----------EqP~~~~~~~~~~~~l~~~~-----~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~ 297 (410)
T 3dip_A 238 DYGVLWV----------EDPIAKMDNIPAVADLRRQT-----RAPICGGENLAGTRRFHEMLCADAIDFVMLDLT 297 (410)
T ss_dssp GGTCSEE----------ECCBSCTTCHHHHHHHHHHH-----CCCEEECTTCCSHHHHHHHHHTTCCSEEEECTT
T ss_pred hcCCCEE----------ECCCCCcccHHHHHHHHhhC-----CCCEEecCCcCCHHHHHHHHHcCCCCeEeeccc
Confidence 3444 256 4555566666666654 47899999998 77888888876 688876533
No 379
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=87.78 E-value=1.4 Score=40.95 Aligned_cols=117 Identities=12% Similarity=0.032 Sum_probs=75.2
Q ss_pred cChhhHHH---HHHHcCCCEEEEcccc-----------------cccccHHHHHHHHHH-c--CCcEEEEECCCCCHHHH
Q 023494 125 VEPEQRVP---DFIKAGADIVSVHCEQ-----------------SSTIHLHRTLNQIKD-L--GAKAGVVLNPATSLSAI 181 (281)
Q Consensus 125 ~dp~~~i~---~~~~aGAd~Itvh~Ea-----------------~~~~~i~~~l~~ik~-~--G~k~Glai~p~t~ie~~ 181 (281)
.+|+.+.+ .+.+.|.+.+=+|.-. .......+.++++|+ . ++.+.+..|.....+..
T Consensus 136 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~~~~~~~a 215 (392)
T 2poz_A 136 DTPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDLSGGLTTDET 215 (392)
T ss_dssp CSHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHH
Confidence 46776654 3567899999988541 011234467777777 3 46677788877777665
Q ss_pred HHhhcc---CCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEEc
Q 023494 182 ECVLDV---VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVAG 254 (281)
Q Consensus 182 ~~~l~~---vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~VvG 254 (281)
.++++. .+... ++ |++.+..++-.+++++.. +++|..|+.+. ++.+.++++.| +|++.+-
T Consensus 216 ~~~~~~l~~~~i~~---iE-----~P~~~~~~~~~~~l~~~~-----~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik 280 (392)
T 2poz_A 216 IRFCRKIGELDICF---VE-----EPCDPFDNGALKVISEQI-----PLPIAVGERVYTRFGFRKIFELQACGIIQPD 280 (392)
T ss_dssp HHHHHHHGGGCEEE---EE-----CCSCTTCHHHHHHHHHHC-----SSCEEECTTCCHHHHHHHHHTTTCCSEECCC
T ss_pred HHHHHHHHhcCCCE---EE-----CCCCcccHHHHHHHHhhC-----CCCEEecCCcCCHHHHHHHHHcCCCCEEecC
Confidence 555443 23222 22 445555566666666543 47999999997 78888888776 7877653
No 380
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=87.56 E-value=8.6 Score=34.35 Aligned_cols=142 Identities=20% Similarity=0.234 Sum_probs=76.5
Q ss_pred HHHHHHHHcCCCeEEEEeeeCcccccc---cC------CHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEE
Q 023494 74 EQVKAVELAGCDWIHVDVMDGRFVPNI---TI------GPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSV 144 (281)
Q Consensus 74 ~~l~~l~~~G~d~iHiDImDG~fvpn~---~~------G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itv 144 (281)
+..+.+.+.|+|+| ||==-..=|.- +. =..+|+.|++ .+.++-+| +.+|+ ..+.+.++||++|-=
T Consensus 34 ~~a~~m~~~GAdiI--DIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~-~~v~iSID--T~~~~-Va~~al~aGa~iIND 107 (270)
T 4hb7_A 34 NRVKAMIDEGADII--DVGGVSTRPGHEMVTLEEELNRVLPVVEAIVG-FDVKISVD--TFRSE-VAEACLKLGVDMIND 107 (270)
T ss_dssp HHHHHHHHTTCSEE--EEESCCCSTTCCCCCHHHHHHHHHHHHHHHTT-SSSEEEEE--CSCHH-HHHHHHHHTCCEEEE
T ss_pred HHHHHHHHCCCCEE--EECCccCCCCCCCCchHHHHHHHHHHHHHhhc-CCCeEEEE--CCCHH-HHHHHHHhccceecc
Confidence 33445667899986 44211222321 11 1235566665 45555553 45554 567788999999862
Q ss_pred -cccccccccHHHHHHHHHHcCCcEEEEECCCCCH-----HHHHHhhc-c--------C--CEEEEEeecCCCCCCccch
Q 023494 145 -HCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSL-----SAIECVLD-V--------V--DLVLIMSVNPGFGGQSFIE 207 (281)
Q Consensus 145 -h~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~i-----e~~~~~l~-~--------v--D~IlvmsV~pG~~GQ~f~~ 207 (281)
-.-. .+ .+.++.+.++|+.+.+.-++.+|- +++..++. . + +.|++ +||+|=-+-..
T Consensus 108 Vs~g~---~d-~~m~~~va~~~~~~vlMH~~~~p~~~~vv~ev~~~l~~~i~~a~~aGI~~~~Iil---DPGiGFgKt~~ 180 (270)
T 4hb7_A 108 QWAGL---YD-HRMFQIVAKYDAEIILMHNGNGNRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWL---DPGIGFAKTRN 180 (270)
T ss_dssp TTTTS---SC-THHHHHHHHTTCEEEEECCCSSCCSSCHHHHHHHHHHHHHHHHHHTTCCGGGEEE---ECCTTSSCCHH
T ss_pred ccccc---cc-hhHHHHHHHcCCCeEEeccccCCccccchhHHHHHHHHHHHHHHHcCCCCceEEE---eCCCCcccccc
Confidence 2111 11 256777788988887765544432 22222221 1 2 33443 99987434445
Q ss_pred hHHHHHHHHHHHhhhcCCCCeEEE
Q 023494 208 SQVKKISDLRRMCLEKGVNPWIEV 231 (281)
Q Consensus 208 ~~l~kI~~lr~l~~~~~~~~~I~V 231 (281)
+.++-|+++..+.. +++++-|
T Consensus 181 ~N~~ll~~l~~~~~---lg~PvLv 201 (270)
T 4hb7_A 181 EEAEVMARLDELVA---TEYPVLL 201 (270)
T ss_dssp HHHHHHTCHHHHHT---TCSCBEE
T ss_pred cHHHHHhhHHHHhc---CCCCEEE
Confidence 56666777666642 3456544
No 381
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=87.49 E-value=3.8 Score=35.61 Aligned_cols=131 Identities=10% Similarity=0.037 Sum_probs=77.2
Q ss_pred ceEeEEEecc-CccCHHHHHHHHHHcCCCeEEEEeeeCc-ccccccCCHHHHHHcCcC---CCCCee-EEEE------e-
Q 023494 58 IIVSPSILSA-NFAKLGEQVKAVELAGCDWIHVDVMDGR-FVPNITIGPLVVDALRPV---TDLPLD-VHLM------I- 124 (281)
Q Consensus 58 ~~i~pSila~-D~~~l~~~l~~l~~~G~d~iHiDImDG~-fvpn~~~G~~~I~~ir~~---t~~~id-aHLm------v- 124 (281)
++++-...++ +...+++.++.+.+.|.+.+++..-+.. ++....+....++++|+. .++.+. +|.- .
T Consensus 17 ~~~gi~~~~~~~~~~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~l~ 96 (295)
T 3cqj_A 17 IPLGIYEKALPAGECWLERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVPSMCLSAHRRFPLG 96 (295)
T ss_dssp CCEEEEGGGSCCCSCHHHHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEEEEEEGGGGTSCTT
T ss_pred ccceeeeecCCCCCCHHHHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEEEEecCcccCCCCC
Confidence 4455555555 3468999999999999999988643321 010122344445555442 355543 3321 1
Q ss_pred -cChh----------hHHHHHHHcCCCEEEEccccc----c--------cccHHHHHHHHHHcCCcEEEEECCC---CCH
Q 023494 125 -VEPE----------QRVPDFIKAGADIVSVHCEQS----S--------TIHLHRTLNQIKDLGAKAGVVLNPA---TSL 178 (281)
Q Consensus 125 -~dp~----------~~i~~~~~aGAd~Itvh~Ea~----~--------~~~i~~~l~~ik~~G~k~Glai~p~---t~i 178 (281)
.||. +.++.+.+.|++.|.+|.-.. . .+.+.++.+.++++|+++++--.+. ...
T Consensus 97 ~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~~~~~ 176 (295)
T 3cqj_A 97 SEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYPLMNSI 176 (295)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEEEECCSSGGGCSH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEeeCCCcccCCH
Confidence 1332 235556788999999985320 0 1225566677788999988876554 244
Q ss_pred HHHHHhhccC
Q 023494 179 SAIECVLDVV 188 (281)
Q Consensus 179 e~~~~~l~~v 188 (281)
+.+..+++.+
T Consensus 177 ~~~~~l~~~v 186 (295)
T 3cqj_A 177 SKALGYAHYL 186 (295)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 5566666654
No 382
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=87.49 E-value=15 Score=32.71 Aligned_cols=172 Identities=15% Similarity=0.109 Sum_probs=99.0
Q ss_pred ccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHH----HHHHcCcC--CCCCeeEEEEecChhh---HHHHHHH
Q 023494 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPL----VVDALRPV--TDLPLDVHLMIVEPEQ---RVPDFIK 136 (281)
Q Consensus 66 a~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~----~I~~ir~~--t~~~idaHLmv~dp~~---~i~~~~~ 136 (281)
..|+..+++.++.+.+.|++-+-+ =|+.--..++..+ +++...+. -..|+.++.-.++..+ +.+.+.+
T Consensus 24 ~iD~~~l~~lv~~li~~Gv~gl~~---~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~ 100 (297)
T 3flu_A 24 SIHYEQLRDLIDWHIENGTDGIVA---VGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEK 100 (297)
T ss_dssp CBCHHHHHHHHHHHHHTTCCEEEE---SSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEe---CccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHH
Confidence 467778889999999999997643 2332222333333 34443332 2478999887777664 4556778
Q ss_pred cCCCEEEEccc---ccccccHHHHHHHHHH-cCCcEEEEECCC-----CCHHHHHHhhccCCEEEEEeecCCCCCCccch
Q 023494 137 AGADIVSVHCE---QSSTIHLHRTLNQIKD-LGAKAGVVLNPA-----TSLSAIECVLDVVDLVLIMSVNPGFGGQSFIE 207 (281)
Q Consensus 137 aGAd~Itvh~E---a~~~~~i~~~l~~ik~-~G~k~Glai~p~-----t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~~ 207 (281)
+|||.+.+..- ..+.+.+.+..+.+-+ .++.+.+=-+|. -+.+.+.++.+...++.+= .-.
T Consensus 101 ~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiK----------dss 170 (297)
T 3flu_A 101 AGADYTLSVVPYYNKPSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLAEIPNIVGVK----------EAS 170 (297)
T ss_dssp TTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTTSTTEEEEE----------ECS
T ss_pred cCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCHHHHHHHHcCCCEEEEE----------eCC
Confidence 99999877632 1112234444444433 466666654442 3456777776444444321 111
Q ss_pred hHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEccc
Q 023494 208 SQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSA 256 (281)
Q Consensus 208 ~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSa 256 (281)
..+.++.++++..+ .++.+ ..| - -+.+-.....|++.+|.|.+
T Consensus 171 gd~~~~~~~~~~~~---~~f~v-~~G-~-d~~~l~~l~~G~~G~is~~a 213 (297)
T 3flu_A 171 GNIGSNIELINRAP---EGFVV-LSG-D-DHTALPFMLCGGHGVITVAA 213 (297)
T ss_dssp CCHHHHHHHHHHSC---TTCEE-EEC-C-GGGHHHHHHTTCCEEEESGG
T ss_pred CCHHHHHHHHHhcC---CCeEE-EEC-c-HHHHHHHHhCCCCEEEechH
Confidence 12455555555432 23544 333 2 34566778899999999965
No 383
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=87.49 E-value=0.6 Score=42.24 Aligned_cols=191 Identities=10% Similarity=0.084 Sum_probs=106.1
Q ss_pred CceEeEEEeccCccCHHHHHHHHHHcCCCeEEEE---e-e--eCcccccc-----cCCHHHHHHcCcCCCCCeeEEEEe-
Q 023494 57 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVD---V-M--DGRFVPNI-----TIGPLVVDALRPVTDLPLDVHLMI- 124 (281)
Q Consensus 57 ~~~i~pSila~D~~~l~~~l~~l~~~G~d~iHiD---I-m--DG~fvpn~-----~~G~~~I~~ir~~t~~~idaHLmv- 124 (281)
+.+..|..+..- . -+.++++|.|.+-+- + | =| .|.. ..=...++.|.+.++.|+.+|+=.
T Consensus 21 ~~i~~~~a~D~~-----s-A~i~e~aGf~ai~vs~s~~a~~~lG--~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~G 92 (287)
T 3b8i_A 21 RCYHTASVFDPM-----S-ARIAADLGFECGILGGSVASLQVLA--APDFALITLSEFVEQATRIGRVARLPVIADADHG 92 (287)
T ss_dssp CCEECEECCSHH-----H-HHHHHHTTCSCEEECHHHHHHHHHS--CCSSSCSCHHHHHHHHHHHHTTCSSCEEEECTTC
T ss_pred CcEEEecCCCHH-----H-HHHHHHcCCCEEEeCcHHHHHHhcC--CCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 455556555222 1 335566788887662 0 1 12 1221 112334566666677888888754
Q ss_pred -cChh---hHHHHHHHcCCCEEEEccccc------------ccccHHHHHHHHHHcCCcEEEEECCCC---------CHH
Q 023494 125 -VEPE---QRVPDFIKAGADIVSVHCEQS------------STIHLHRTLNQIKDLGAKAGVVLNPAT---------SLS 179 (281)
Q Consensus 125 -~dp~---~~i~~~~~aGAd~Itvh~Ea~------------~~~~i~~~l~~ik~~G~k~Glai~p~t---------~ie 179 (281)
-+|. +.+..+.++|+..|.+-.-.. +.++..+.++++++.+...++.++-.| -++
T Consensus 93 yg~~~~~~~~v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~~~~~~~i~aRtdaa~~gl~~ai~ 172 (287)
T 3b8i_A 93 YGNALNVMRTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDAVIQ 172 (287)
T ss_dssp SSSHHHHHHHHHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCCSTTSEEEEEEETTTSCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHcCCCCCcEEEEechhhhcCHHHHHH
Confidence 2564 346678889999998753310 112456777778887654333332221 223
Q ss_pred HHHHhhc-cCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCe-EEEecCCCh-hcHHHHHHcCCcEEEEccc
Q 023494 180 AIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPW-IEVDGGVGP-KNAYKVIEAGANALVAGSA 256 (281)
Q Consensus 180 ~~~~~l~-~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~-I~VDGGI~~-e~i~~~~~aGAD~~VvGSa 256 (281)
+.+.|.+ .+|.|.+-++ . ..+.++++.+.+ ++| +.+.||-++ -+..++.+.|+..++.|..
T Consensus 173 Ra~ay~eAGAd~i~~e~~----~-------~~~~~~~i~~~~-----~~P~ii~~~g~~~~~~~~eL~~lGv~~v~~~~~ 236 (287)
T 3b8i_A 173 RTLAYQEAGADGICLVGV----R-------DFAHLEAIAEHL-----HIPLMLVTYGNPQLRDDARLARLGVRVVVNGHA 236 (287)
T ss_dssp HHHHHHHTTCSEEEEECC----C-------SHHHHHHHHTTC-----CSCEEEECTTCGGGCCHHHHHHTTEEEEECCCH
T ss_pred HHHHHHHcCCCEEEecCC----C-------CHHHHHHHHHhC-----CCCEEEeCCCCCCCCCHHHHHHcCCcEEEEChH
Confidence 4444544 4898876322 1 122333333322 234 335566554 4789999999999999988
Q ss_pred ccCCCCHHHHHHHHHH
Q 023494 257 VFGAKDYAEAIKGIKT 272 (281)
Q Consensus 257 If~a~dp~~~~~~l~~ 272 (281)
.+.+.-.. ..+.|++
T Consensus 237 ~~raa~~a-~~~~l~~ 251 (287)
T 3b8i_A 237 AYFAAIKA-TYDCLRE 251 (287)
T ss_dssp HHHHHHHH-HHHHHHH
T ss_pred HHHHHHHH-HHHHHHH
Confidence 88643333 5555554
No 384
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=87.47 E-value=1.3 Score=38.46 Aligned_cols=115 Identities=14% Similarity=0.066 Sum_probs=73.0
Q ss_pred ccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcC---CCCCeeEEEE-------e-----------cCh
Q 023494 69 FAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV---TDLPLDVHLM-------I-----------VEP 127 (281)
Q Consensus 69 ~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~---t~~~idaHLm-------v-----------~dp 127 (281)
...+++.++.+.+.|.+.+++..-+.. .+....++++|+. .++.+.++-. . .||
T Consensus 20 ~~~l~~~l~~~~~~G~~~vEl~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 94 (290)
T 3tva_A 20 DAGLGVHLEVAQDLKVPTVQVHAPHPH-----TRTREHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPL 94 (290)
T ss_dssp SSSSSBCHHHHHHTTCSEEEEECCCGG-----GCSHHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCST
T ss_pred CCCHHHHHHHHHHcCCCEEEecCCCCC-----cCCHHHHHHHHHHHHHcCCEEEEEeeccCCcccccccccccccCCCCH
Confidence 357778899999999999988754432 1344555555442 5666666522 0 133
Q ss_pred h----------hHHHHHHHcCCCEEEEcccccc----------cccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhcc
Q 023494 128 E----------QRVPDFIKAGADIVSVHCEQSS----------TIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV 187 (281)
Q Consensus 128 ~----------~~i~~~~~aGAd~Itvh~Ea~~----------~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~ 187 (281)
. +.++.+.+.|+..|.+|.-..+ .+.+.++.+.++++|+++++--.++ ..+.+..+++.
T Consensus 95 ~~r~~~~~~~~~~i~~a~~lG~~~v~~~~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~-~~~~~~~l~~~ 173 (290)
T 3tva_A 95 ETRASRVAEMKEISDFASWVGCPAIGLHIGFVPESSSPDYSELVRVTQDLLTHAANHGQAVHLETGQE-SADHLLEFIED 173 (290)
T ss_dssp TTHHHHHHHHHHHHHHHHHHTCSEEEECCCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEEEECCSS-CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEEEecCCC-CHHHHHHHHHh
Confidence 1 3455667889999999842100 1235667777888999998876654 45566677766
Q ss_pred CC
Q 023494 188 VD 189 (281)
Q Consensus 188 vD 189 (281)
++
T Consensus 174 ~~ 175 (290)
T 3tva_A 174 VN 175 (290)
T ss_dssp HC
T ss_pred cC
Confidence 43
No 385
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=87.34 E-value=2 Score=40.61 Aligned_cols=114 Identities=9% Similarity=0.044 Sum_probs=76.6
Q ss_pred ChhhHHH---HHHHcCCCEEEEcccccccccHHHHHHHHHH-c--CCcEEEEECCCCCHHHHHHhhcc-----CCEEEEE
Q 023494 126 EPEQRVP---DFIKAGADIVSVHCEQSSTIHLHRTLNQIKD-L--GAKAGVVLNPATSLSAIECVLDV-----VDLVLIM 194 (281)
Q Consensus 126 dp~~~i~---~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~-~--G~k~Glai~p~t~ie~~~~~l~~-----vD~Ilvm 194 (281)
+|+.+.+ .+.+.|.+.+=+|.-. +.....+.++++|+ . ++.+.+..|.....+...++++. +++|
T Consensus 198 ~~e~~~~~a~~~~~~Gf~~vKik~g~-~~~~d~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i--- 273 (441)
T 2hxt_A 198 SDEKLVRLAKEAVADGFRTIKLKVGA-NVQDDIRRCRLARAAIGPDIAMAVDANQRWDVGPAIDWMRQLAEFDIAWI--- 273 (441)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCS-CHHHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHTTGGGCCSCE---
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCC-CHHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCee---
Confidence 6766654 4567899999999753 22334467777877 3 46777888887777766666543 3333
Q ss_pred eecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEEc
Q 023494 195 SVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVAG 254 (281)
Q Consensus 195 sV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~VvG 254 (281)
.|++.+..++-.+++++... .++|..|+.++ ++.+..+++.| +|++.+-
T Consensus 274 -------EqP~~~~d~~~~~~l~~~~~----~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 324 (441)
T 2hxt_A 274 -------EEPTSPDDVLGHAAIRQGIT----PVPVSTGEHTQNRVVFKQLLQAGAVDLIQID 324 (441)
T ss_dssp -------ECCSCTTCHHHHHHHHHHHT----TSCEEECTTCCSHHHHHHHHHHTCCSEECCC
T ss_pred -------eCCCCHHHHHHHHHHHhhCC----CCCEEEeCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 35555555666666666542 37899999997 77888887776 6877654
No 386
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=87.25 E-value=4.3 Score=34.82 Aligned_cols=217 Identities=14% Similarity=0.147 Sum_probs=106.4
Q ss_pred eEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcC---CCCC---eeEEE------EecC
Q 023494 59 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV---TDLP---LDVHL------MIVE 126 (281)
Q Consensus 59 ~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~---t~~~---idaHL------mv~d 126 (281)
+|..++... ..+++.++.+.+.|.+.+++...+.+..+...+....++++|+. .++. +.+|. ...|
T Consensus 3 ~~G~~~~~~--~~l~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~l~~~~ 80 (285)
T 1qtw_A 3 YIGAHVSAA--GGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPV 80 (285)
T ss_dssp EEEEECCCT--TCHHHHHHHHHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHHTTCCGGGBCCBCCTTCCTTCSS
T ss_pred ceeEEeccc--cCHHHHHHHHHHcCCCEEEeeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCCceeEEecCCcccccCCCC
Confidence 455554443 47999999999999999887322221111112344455555432 3444 44443 1124
Q ss_pred hh----------hHHHHHHHcCCCEEEEcccccc-----cccHHHHHHHH-----HHcCCcEEEEECCC------CCHHH
Q 023494 127 PE----------QRVPDFIKAGADIVSVHCEQSS-----TIHLHRTLNQI-----KDLGAKAGVVLNPA------TSLSA 180 (281)
Q Consensus 127 p~----------~~i~~~~~aGAd~Itvh~Ea~~-----~~~i~~~l~~i-----k~~G~k~Glai~p~------t~ie~ 180 (281)
|. +.++.+.+.|+..|.+|.-... .+....+++.+ +++|+++++--.+. +..+.
T Consensus 81 ~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~a~~~gv~l~lEn~~~~~~~~~~~~~~ 160 (285)
T 1qtw_A 81 TEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEH 160 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEEEECCCBCTTTSCHHHHHHHHHHHHHHHHHHCSSCEEEEECCCCCTTBCCSSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHhccCCCEEEEecCCCCCCcccCCHHH
Confidence 42 2355567899999999854210 01122222222 23688887765433 25566
Q ss_pred HHHhhccC---CEEEEEeecCC---CCCCcc-chhHHH-HHHHHHHHhh-hcCCCCeE---------------E-EecCC
Q 023494 181 IECVLDVV---DLVLIMSVNPG---FGGQSF-IESQVK-KISDLRRMCL-EKGVNPWI---------------E-VDGGV 235 (281)
Q Consensus 181 ~~~~l~~v---D~IlvmsV~pG---~~GQ~f-~~~~l~-kI~~lr~l~~-~~~~~~~I---------------~-VDGGI 235 (281)
+..+++.+ +.+-+ +.++| ..|... .++.++ -++++.+... ++=..+.+ . =+|-|
T Consensus 161 ~~~l~~~v~~~~~~g~-~~D~~H~~~~g~~~~~~~~~~~~~~~~~~~~g~~~i~~vH~~D~~~~~~~~~~~h~~~G~G~i 239 (285)
T 1qtw_A 161 LAAIIDGVEDKSRVGV-CIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 (285)
T ss_dssp HHHHHHHCSCGGGEEE-EEEHHHHHHHTCCCSSHHHHHHHHHHHHHHTCGGGEEEEEECEESSCTTCCCCCEECTTTSSS
T ss_pred HHHHHHhhcCccceEE-EEEhHhHHHcCCCcCChHHHHHHHHHHHHhcCccceeEEEEecCCCcccCCcccccCCCCCCC
Confidence 77777766 33433 23333 123222 121221 1333333221 10000001 0 13556
Q ss_pred ChhcHH-HHHHcCCcE--EEEcccccCCCCHHHHHHHHHHhcCcCccC
Q 023494 236 GPKNAY-KVIEAGANA--LVAGSAVFGAKDYAEAIKGIKTSKRPQAVA 280 (281)
Q Consensus 236 ~~e~i~-~~~~aGAD~--~VvGSaIf~a~dp~~~~~~l~~~~~~~~~~ 280 (281)
..+.+- .+.+.|-+. +++= .++.++.++.++.+++..++.+||
T Consensus 240 d~~~~~~~L~~~gy~g~~~~lE--~~~~~~~~~s~~~lr~~~~~~~~~ 285 (285)
T 1qtw_A 240 GHDAFRWIMQDDRFDGIPLILE--TINPDIWAEEIAWLKAQQTEKAVA 285 (285)
T ss_dssp CSHHHHHHHTCGGGTTSEEEEC--CSCGGGHHHHHHHHHHHTTSSCCC
T ss_pred CHHHHHHHHhccCcCCCCEEEe--cCCCcchHHHHHHHHHHHhhhccC
Confidence 655443 444555543 3332 233356677888888888776664
No 387
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=87.16 E-value=2.5 Score=39.48 Aligned_cols=77 Identities=23% Similarity=0.264 Sum_probs=49.8
Q ss_pred EeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCC-CCCeeEEEEecChhhHHHHHHHcC
Q 023494 60 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIVEPEQRVPDFIKAG 138 (281)
Q Consensus 60 i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t-~~~idaHLmv~dp~~~i~~~~~aG 138 (281)
+..++.. + .+..+.++.+.+.|+|.++++..-|. | .+-.+.++++|+.+ +.|+.+. -+.++ +..+.+.++|
T Consensus 144 ~~~~i~~-~-~~~~~~a~~~~~~G~d~i~i~~~~g~--~--~~~~e~i~~ir~~~~~~pviv~-~v~~~-~~a~~a~~~G 215 (404)
T 1eep_A 144 VGAAVSI-D-IDTIERVEELVKAHVDILVIDSAHGH--S--TRIIELIKKIKTKYPNLDLIAG-NIVTK-EAALDLISVG 215 (404)
T ss_dssp CEEEECS-C-TTHHHHHHHHHHTTCSEEEECCSCCS--S--HHHHHHHHHHHHHCTTCEEEEE-EECSH-HHHHHHHTTT
T ss_pred EEEEeCC-C-hhHHHHHHHHHHCCCCEEEEeCCCCC--h--HHHHHHHHHHHHHCCCCeEEEc-CCCcH-HHHHHHHhcC
Confidence 4455543 2 23556677888899999887432221 2 23356778888875 6777651 23333 4677888999
Q ss_pred CCEEEE
Q 023494 139 ADIVSV 144 (281)
Q Consensus 139 Ad~Itv 144 (281)
+|+|.+
T Consensus 216 ad~I~v 221 (404)
T 1eep_A 216 ADCLKV 221 (404)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 999999
No 388
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=87.15 E-value=17 Score=32.81 Aligned_cols=172 Identities=12% Similarity=0.115 Sum_probs=99.2
Q ss_pred ccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHH----HHHHcCcC--CCCCeeEEEEecChhh---HHHHHHH
Q 023494 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPL----VVDALRPV--TDLPLDVHLMIVEPEQ---RVPDFIK 136 (281)
Q Consensus 66 a~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~----~I~~ir~~--t~~~idaHLmv~dp~~---~i~~~~~ 136 (281)
..|+..+++.++.+.+.|++-+-+ =|+.--..++..+ +++...+. -..|+.++.-.++..+ +.+.+.+
T Consensus 40 ~iD~~~l~~lv~~li~~Gv~Gl~v---~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~ 116 (314)
T 3qze_A 40 RLDWDSLAKLVDFHLQEGTNAIVA---VGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKS 116 (314)
T ss_dssp CBCHHHHHHHHHHHHHHTCCEEEE---SSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEE---CccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHH
Confidence 467778889999999999997633 3332222333333 34433332 2378898887777664 4556778
Q ss_pred cCCCEEEEccc---ccccccHHHHHHHHHH-cCCcEEEEECC-----CCCHHHHHHhhccCCEEEEEeecCCCCCCccch
Q 023494 137 AGADIVSVHCE---QSSTIHLHRTLNQIKD-LGAKAGVVLNP-----ATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIE 207 (281)
Q Consensus 137 aGAd~Itvh~E---a~~~~~i~~~l~~ik~-~G~k~Glai~p-----~t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~~ 207 (281)
+|||.+.+..- ..+.+.+.+..+.+-+ .++.+.+=-+| +-+.+.+.++.+...++.+= +. .|
T Consensus 117 ~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiK--ds--sg----- 187 (314)
T 3qze_A 117 GGADACLLVTPYYNKPTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERLSKVPNIIGIK--EA--TG----- 187 (314)
T ss_dssp TTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSCSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEEE--EC--SC-----
T ss_pred cCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhcCCCEEEEE--cC--CC-----
Confidence 99999887632 1112234444444433 46666665444 23556777776544444331 11 11
Q ss_pred hHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEccc
Q 023494 208 SQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSA 256 (281)
Q Consensus 208 ~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSa 256 (281)
.+.++.++++..+ .++.+ ..| -. +.+-.....|++.+|.|.+
T Consensus 188 -d~~~~~~~~~~~~---~~f~v-~~G-~d-~~~l~~l~~Ga~G~is~~a 229 (314)
T 3qze_A 188 -DLQRAKEVIERVG---KDFLV-YSG-DD-ATAVELMLLGGKGNISVTA 229 (314)
T ss_dssp -CHHHHHHHHHHSC---TTSEE-EES-CG-GGHHHHHHTTCCEEEESGG
T ss_pred -CHHHHHHHHHHcC---CCeEE-Eec-Ch-HHHHHHHHCCCCEEEecHH
Confidence 2445555555432 23544 333 33 3466678999999999965
No 389
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=87.06 E-value=8.6 Score=34.94 Aligned_cols=135 Identities=16% Similarity=0.123 Sum_probs=72.9
Q ss_pred cCHHHHHHHHHHcCCCeEEEEeeeCcccccc-----cCCHHHHHHcCcCCCCCeeEEEEecChhh---HHHHHHHcCCC-
Q 023494 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNI-----TIGPLVVDALRPVTDLPLDVHLMIVEPEQ---RVPDFIKAGAD- 140 (281)
Q Consensus 70 ~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~-----~~G~~~I~~ir~~t~~~idaHLmv~dp~~---~i~~~~~aGAd- 140 (281)
....+..+.+.+.|+|+| ||-=...-|+- ..-.++|+.+++.++.|+.+ .=+.||+. .++.+.++|++
T Consensus 74 ~~~~~~A~~~v~~GAdiI--DIg~~StrP~~~~vs~eee~~vV~~v~~~~~vplsI-~DT~~~~~~~~V~eaal~aga~~ 150 (310)
T 2h9a_B 74 NDPVAWAKKCVEYGADIV--ALRLVSAHPDGQNRSGAELAEVCKAVADAIDVPLMI-IGCGVEEKDAEIFPVIGEALSGR 150 (310)
T ss_dssp TCHHHHHHHHHHTTCSEE--EEECGGGCTTTTCCCHHHHHHHHHHHHHHCSSCEEE-ECCSCHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHHcCCcEE--EEeCccCCCCCCCCCHHHHHHHHHHHHHhCCceEEE-ECCCCCCCCHHHHHHHHHhCCCC
Confidence 345555666778899986 44332222431 11244677777655555432 02333332 46778899998
Q ss_pred --EE-EEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhcc-----C--CEEEEEeecCCCC--CCccchh
Q 023494 141 --IV-SVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV-----V--DLVLIMSVNPGFG--GQSFIES 208 (281)
Q Consensus 141 --~I-tvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~-----v--D~IlvmsV~pG~~--GQ~f~~~ 208 (281)
+| .+-.+ ...+.+..++++|..+.+.- +. .++.+++.... + +-|++ +||++ |..+ .+
T Consensus 151 k~iINdvs~~-----~~~~~~~~aa~~g~~vv~m~-~~-dv~~l~~~~~~a~~~Gi~~e~Iil---DPg~g~~g~~~-e~ 219 (310)
T 2h9a_B 151 NCLLSSATKD-----NYKPIVATCMVHGHSVVASA-PL-DINLSKQLNIMIMEMNLAPNRIIM---DPLIGALGYGI-EY 219 (310)
T ss_dssp CCEEEEECTT-----THHHHHHHHHHHTCEEEEEC-SS-CHHHHHHHHHHHHTTTCCGGGEEE---ECCCCCTTTTH-HH
T ss_pred CCEEEECCCC-----ccHHHHHHHHHhCCCEEEEC-hh-HHHHHHHHHHHHHHCCCChhhEEE---eCCCccccCch-Hh
Confidence 44 33333 35678888899998766643 22 35545544332 3 33433 89875 3111 23
Q ss_pred HHHHHHHHHH
Q 023494 209 QVKKISDLRR 218 (281)
Q Consensus 209 ~l~kI~~lr~ 218 (281)
++..++.+|.
T Consensus 220 ~~~~l~~ir~ 229 (310)
T 2h9a_B 220 SYSIIERMRL 229 (310)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4344444454
No 390
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=86.99 E-value=1.9 Score=41.82 Aligned_cols=87 Identities=13% Similarity=0.185 Sum_probs=57.4
Q ss_pred CceEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecCh--------h
Q 023494 57 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEP--------E 128 (281)
Q Consensus 57 ~~~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp--------~ 128 (281)
..+|+.+|..-|+..+.+.++...+.|+|.+++.+ |- ..++. ..+.++.+++.+++|+.+++-.... .
T Consensus 4 ~~~icv~l~~~~~~~~~~~~~~~~~~g~D~vElRv-D~--l~~~~-~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~ 79 (523)
T 2o7s_A 4 PSLICAPVMADSIDKMVIETSKAHELGADLVEIRL-DW--LKDFN-PLEDLKTIIKKSPLPTLFTYRPKWEGGQYEGDEN 79 (523)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHHHHTCSEEEEEG-GG--CSSCC-HHHHHHHHHHHCSSCEEEECCBGGGTSSBCSCHH
T ss_pred CCEEEEEecCCCHHHHHHHHHHhhhcCCCEEEEEE-ec--ccccC-hHHHHHHHHhcCCCcEEEEecccccCCCCCCCHH
Confidence 55899999998888877778777777899999963 21 11111 1345666666677899888765322 2
Q ss_pred hH---HHHHHHcCCCEEEEccc
Q 023494 129 QR---VPDFIKAGADIVSVHCE 147 (281)
Q Consensus 129 ~~---i~~~~~aGAd~Itvh~E 147 (281)
.| ++.+.+.|+|+|-+-..
T Consensus 80 ~~~~ll~~~~~~~~~yiDvEl~ 101 (523)
T 2o7s_A 80 ERRDVLRLAMELGADYIDVELQ 101 (523)
T ss_dssp HHHHHHHHHHHHTCSEEEEEHH
T ss_pred HHHHHHHHHHHhCCCEEEEECC
Confidence 23 34456678888776543
No 391
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=86.77 E-value=3.7 Score=36.65 Aligned_cols=155 Identities=17% Similarity=0.183 Sum_probs=81.9
Q ss_pred HHcCcCCCCCeeEEEEecChh-----hHHHHHHHcCCCEEEEccccc----ccccHH-----------------HHHHHH
Q 023494 108 DALRPVTDLPLDVHLMIVEPE-----QRVPDFIKAGADIVSVHCEQS----STIHLH-----------------RTLNQI 161 (281)
Q Consensus 108 ~~ir~~t~~~idaHLmv~dp~-----~~i~~~~~aGAd~Itvh~Ea~----~~~~i~-----------------~~l~~i 161 (281)
+++|+.-.+.+..+++.-||. ++++.+.++|||+|-+..--+ +.+.++ +.++.+
T Consensus 12 ~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~ 91 (271)
T 3nav_A 12 QRLSAAQQGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQI 91 (271)
T ss_dssp HHHHHTTBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 334433335678888888884 345667788999999884321 011233 466677
Q ss_pred HHc--CCcEEEEE--CC--CCCHHHHHHhh-c-cCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEec
Q 023494 162 KDL--GAKAGVVL--NP--ATSLSAIECVL-D-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDG 233 (281)
Q Consensus 162 k~~--G~k~Glai--~p--~t~ie~~~~~l-~-~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDG 233 (281)
|+. .+.+.+.. || .+.++.+.+-+ + .+|.+++ |.. ++ +...++++...+++.+.-.-+..
T Consensus 92 r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIi----pDl---p~-----ee~~~~~~~~~~~gl~~I~lvap 159 (271)
T 3nav_A 92 RARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLI----ADV---PT-----NESQPFVAAAEKFGIQPIFIAPP 159 (271)
T ss_dssp HHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEE----TTS---CG-----GGCHHHHHHHHHTTCEEEEEECT
T ss_pred HhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEE----CCC---CH-----HHHHHHHHHHHHcCCeEEEEECC
Confidence 765 44555543 33 13444333322 2 2787766 211 11 22445555555655543333444
Q ss_pred CCChhcHHHHHHcCCcEEEEcc--cccCCC-----CHHHHHHHHHHhc
Q 023494 234 GVGPKNAYKVIEAGANALVAGS--AVFGAK-----DYAEAIKGIKTSK 274 (281)
Q Consensus 234 GI~~e~i~~~~~aGAD~~VvGS--aIf~a~-----dp~~~~~~l~~~~ 274 (281)
--+.+.++.+.+.+.+.+-.-| ..++.. +..+.++++|+..
T Consensus 160 ~t~~eri~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~ 207 (271)
T 3nav_A 160 TASDETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQFD 207 (271)
T ss_dssp TCCHHHHHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHHHhc
Confidence 4556888888888777655422 234321 2346667777654
No 392
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=86.72 E-value=3.7 Score=37.89 Aligned_cols=119 Identities=19% Similarity=0.294 Sum_probs=70.5
Q ss_pred HHHHHHHHcCCCeEEEEeeeCcc-----ccc--c---cCC----------HHHHHHcCcCC--CCCeeEEEEecC-----
Q 023494 74 EQVKAVELAGCDWIHVDVMDGRF-----VPN--I---TIG----------PLVVDALRPVT--DLPLDVHLMIVE----- 126 (281)
Q Consensus 74 ~~l~~l~~~G~d~iHiDImDG~f-----vpn--~---~~G----------~~~I~~ir~~t--~~~idaHLmv~d----- 126 (281)
++.+.+.++|.|.|++-.-.|-. .|+ . .+| .++++++|+.. +.++-+.|=..+
T Consensus 162 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G 241 (363)
T 3l5l_A 162 DAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRD 241 (363)
T ss_dssp HHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCH
T ss_pred HHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCCC
Confidence 44456678999998887654422 121 1 333 67888998874 467777664432
Q ss_pred ------hhhHHHHHHHcCCCEEEEccccc--------ccccHHHHHHHHHHc-CCcEEEEECCCCCHHHHHHhhcc--CC
Q 023494 127 ------PEQRVPDFIKAGADIVSVHCEQS--------STIHLHRTLNQIKDL-GAKAGVVLNPATSLSAIECVLDV--VD 189 (281)
Q Consensus 127 ------p~~~i~~~~~aGAd~Itvh~Ea~--------~~~~i~~~l~~ik~~-G~k~Glai~p~t~ie~~~~~l~~--vD 189 (281)
..++++.+.++|+|+++++.-.. ......+.++.+|+. ++.+ ++..-=+..+..++++.. +|
T Consensus 242 ~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPV-i~~GgI~s~e~a~~~l~~G~aD 320 (363)
T 3l5l_A 242 EQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPV-TSAWGFGTPQLAEAALQANQLD 320 (363)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCE-EECSSTTSHHHHHHHHHTTSCS
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcE-EEeCCCCCHHHHHHHHHCCCcc
Confidence 22346677899999999995210 011123456666664 3332 222222466777777764 89
Q ss_pred EEEE
Q 023494 190 LVLI 193 (281)
Q Consensus 190 ~Ilv 193 (281)
+|.+
T Consensus 321 ~V~i 324 (363)
T 3l5l_A 321 LVSV 324 (363)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 8865
No 393
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=86.67 E-value=5.4 Score=37.50 Aligned_cols=106 Identities=14% Similarity=0.155 Sum_probs=70.6
Q ss_pred hHHHHHHHcCCCEEE--Ecc-ccc---ccccHHHHHHHHHHcCCcEEEEECCCCCHH------HHHHhhc-cCCEEEEEe
Q 023494 129 QRVPDFIKAGADIVS--VHC-EQS---STIHLHRTLNQIKDLGAKAGVVLNPATSLS------AIECVLD-VVDLVLIMS 195 (281)
Q Consensus 129 ~~i~~~~~aGAd~It--vh~-Ea~---~~~~i~~~l~~ik~~G~k~Glai~p~t~ie------~~~~~l~-~vD~Ilvms 195 (281)
.|++.+.++|...|. +|. |.. -.+.+.++++.++++|+++.+.++|.+--. .+..+.+ .++.| -
T Consensus 45 ~Yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DVsp~~~~~Lg~s~~dl~~f~~lGi~gL---R 121 (385)
T 1x7f_A 45 AYISAAARHGFSRIFTCLLSVNRPKEEIVAEFKEIINHAKDNNMEVILDVAPAVFDQLGISYSDLSFFAELGADGI---R 121 (385)
T ss_dssp HHHHHHHTTTEEEEEEEECCC--------HHHHHHHHHHHHTTCEEEEEECTTCC------CCCTHHHHHHTCSEE---E
T ss_pred HHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHcCCCHHHHHHHHHcCCCEE---E
Confidence 589999999998664 432 211 123578899999999999999999974321 2222222 35544 4
Q ss_pred ecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCc
Q 023494 196 VNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGAN 249 (281)
Q Consensus 196 V~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD 249 (281)
.+-||+++ ++..+. .+.++++|++=-..+.+.+..+.+.|+|
T Consensus 122 LD~Gf~~~-----------eia~ls-~n~~glkIeLNASt~~~~l~~l~~~~~n 163 (385)
T 1x7f_A 122 LDVGFDGL-----------TEAKMT-NNPYGLKIELNVSNDIAYLENILSHQAN 163 (385)
T ss_dssp ESSCCSSH-----------HHHHHT-TCTTCCEEEEETTSCSSHHHHHTTSSCC
T ss_pred EcCCCCHH-----------HHHHHh-cCCCCCEEEEeCcCCHHHHHHHHHcCCC
Confidence 57788772 223332 3345688999888888899999999998
No 394
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=86.67 E-value=3.7 Score=35.58 Aligned_cols=76 Identities=18% Similarity=0.249 Sum_probs=48.5
Q ss_pred eEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccc-cccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHc
Q 023494 59 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVP-NITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA 137 (281)
Q Consensus 59 ~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvp-n~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~a 137 (281)
.+-.=+|..|+. +.++.+.++|+|++.+ |+-- .- .-.+.++.+|+. +...-+-|-...|...++.+.+
T Consensus 59 ~~dvhLmv~dp~---~~i~~~~~aGAd~itv-----h~Ea~~~-~~~~~i~~i~~~-G~k~gv~lnp~tp~~~~~~~l~- 127 (231)
T 3ctl_A 59 PLDCHLMVTRPQ---DYIAQLARAGADFITL-----HPETING-QAFRLIDEIRRH-DMKVGLILNPETPVEAMKYYIH- 127 (231)
T ss_dssp CEEEEEESSCGG---GTHHHHHHHTCSEEEE-----CGGGCTT-THHHHHHHHHHT-TCEEEEEECTTCCGGGGTTTGG-
T ss_pred cEEEEEEecCHH---HHHHHHHHcCCCEEEE-----CcccCCc-cHHHHHHHHHHc-CCeEEEEEECCCcHHHHHHHHh-
Confidence 356667777774 4567888899999976 2211 11 124678888774 6666666655566556555554
Q ss_pred CCCEEEEc
Q 023494 138 GADIVSVH 145 (281)
Q Consensus 138 GAd~Itvh 145 (281)
++|+|.++
T Consensus 128 ~~D~Vlvm 135 (231)
T 3ctl_A 128 KADKITVM 135 (231)
T ss_dssp GCSEEEEE
T ss_pred cCCEEEEe
Confidence 79999754
No 395
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=86.66 E-value=1.5 Score=41.10 Aligned_cols=115 Identities=8% Similarity=0.067 Sum_probs=75.1
Q ss_pred cChhhHHHHHHHcCCCEEEEcccc----------c---ccccHHHHHHHHHHc---CCcEEEEECCCCCHHHHHHhhcc-
Q 023494 125 VEPEQRVPDFIKAGADIVSVHCEQ----------S---STIHLHRTLNQIKDL---GAKAGVVLNPATSLSAIECVLDV- 187 (281)
Q Consensus 125 ~dp~~~i~~~~~aGAd~Itvh~Ea----------~---~~~~i~~~l~~ik~~---G~k~Glai~p~t~ie~~~~~l~~- 187 (281)
.+|.+.++.+.+.|...+=+..-. . ..+.-.+.++++|+. ++.+.+..|.....+....+++.
T Consensus 154 ~~~~~~a~~~~~~G~~~~Kik~g~~~~~~~~~g~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L 233 (400)
T 4dxk_A 154 HRADELAHSLLEDGITAMKIWPFDAAAEKTRGQYISMPDLKSALEPFEKIRKAVGDKMDIMVEFHSMWQLLPAMQIAKAL 233 (400)
T ss_dssp -CHHHHHHHHHHTTCCEEEECTTHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHGGGSEEEEECTTCBCHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHhCCCEEEEcCCCccccccccCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHH
Confidence 456677778889999999887420 0 011223556677764 47788888988888766555443
Q ss_pred ----CCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEEc
Q 023494 188 ----VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVAG 254 (281)
Q Consensus 188 ----vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~VvG 254 (281)
+++| .|++.+..++-.+++++.. +++|+.|+.+. ++.+..+++.| +|++.+-
T Consensus 234 ~~~~i~~i----------EeP~~~~~~~~~~~l~~~~-----~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~d 291 (400)
T 4dxk_A 234 TPYQTFWH----------EDPIKMDSLSSLTRYAAVS-----PAPISASETLGSRWAFRDLLETGAAGVVMLD 291 (400)
T ss_dssp GGGCCSEE----------ECCBCTTSGGGHHHHHHHC-----SSCEEECTTCCHHHHHHHHHHTTCCCEEEEC
T ss_pred hhcCCCEE----------EcCCCcccHHHHHHHHHhC-----CCCEEecCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 3444 2455444444555565543 47899999998 67888888887 6888764
No 396
>2egz_A 3-dehydroquinate dehydratase; aquifex aeolicus VF5, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TLA; 1.75A {Aquifex aeolicus} PDB: 2ysw_A
Probab=86.61 E-value=14 Score=31.66 Aligned_cols=109 Identities=15% Similarity=0.196 Sum_probs=67.4
Q ss_pred eEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccC--CHHHHHHcCcCCCCCeeEEEEec-----ChhhHH
Q 023494 59 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITI--GPLVVDALRPVTDLPLDVHLMIV-----EPEQRV 131 (281)
Q Consensus 59 ~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~--G~~~I~~ir~~t~~~idaHLmv~-----dp~~~i 131 (281)
.|+.+|..- ++++.++.+...|+|.+++.+ | |..+... =.+.++.+|+. ++|+.+++-.. +...|+
T Consensus 2 ~icv~l~~~---~~~~~~~~~~~~~~D~vElRv-D--~l~~~~~~~v~~~~~~lr~~-~~PiI~T~R~~~eGG~~~~~~~ 74 (219)
T 2egz_A 2 LIAVPLDDT---NFSENLKKAKEKGADIVELRV-D--QFSDTSLNYVKEKLEEVHSQ-GLKTILTIRSPEEGGREVKNRE 74 (219)
T ss_dssp EEEEEECST---THHHHHHHHHHHTCSEEEEEG-G--GCSCCCHHHHHHHHHHHHHT-TCEEEEECCCGGGTCCCCTTHH
T ss_pred EEEEEeCCC---CHHHHHHHHHHcCCCEEEEEe-c--cccccCHHHHHHHHHHHHhc-CCcEEEEEeehhccCCCHHHHH
Confidence 467777754 455556666667899999873 2 1111111 12356667775 68898877653 233454
Q ss_pred H---HHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEEC--CCCC
Q 023494 132 P---DFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLN--PATS 177 (281)
Q Consensus 132 ~---~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~--p~t~ 177 (281)
+ .+.+. +|+|-+-... .+....+.+.+++.|.++.+..+ ..||
T Consensus 75 ~ll~~~~~~-~d~iDvEl~~--~~~~~~l~~~~~~~g~kvI~S~Hdf~~tp 122 (219)
T 2egz_A 75 ELFEELSPL-SDYTDIELSS--RGLLVKLYNITKEAGKKLIISYHNFELTP 122 (219)
T ss_dssp HHHHHHTTT-SSEEEEETTC--HHHHHHHHHHHHHTTCEEEEEEEESSCCC
T ss_pred HHHHHHHhc-CCEEEEEccC--CccHHHHHHHHHHcCCEEEEEecCCCCCc
Confidence 4 44556 8999887652 12245778888899999888765 3455
No 397
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=86.60 E-value=14 Score=32.96 Aligned_cols=172 Identities=15% Similarity=0.132 Sum_probs=98.7
Q ss_pred ccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHH----HHHHcCcC--CCCCeeEEEEecChhh---HHHHHHH
Q 023494 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPL----VVDALRPV--TDLPLDVHLMIVEPEQ---RVPDFIK 136 (281)
Q Consensus 66 a~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~----~I~~ir~~--t~~~idaHLmv~dp~~---~i~~~~~ 136 (281)
..|+..+++.++.+.+.|++-+ +.-|+.--..++..+ +++...+. -..|+.++.-.++..+ +.+.+.+
T Consensus 21 ~iD~~~l~~lv~~li~~Gv~gl---~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~ 97 (300)
T 3eb2_A 21 RVRADVMGRLCDDLIQAGVHGL---TPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEK 97 (300)
T ss_dssp CBCHHHHHHHHHHHHHTTCSCB---BTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEE---EECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHH
Confidence 4677788899999999999865 222332222333333 34443333 2478999988877764 4556678
Q ss_pred cCCCEEEEccc---ccccccHHHHHHHHH-HcCCcEEEEECCC-----CCHHHHHHhhccCCEEEEEeecCCCCCCccch
Q 023494 137 AGADIVSVHCE---QSSTIHLHRTLNQIK-DLGAKAGVVLNPA-----TSLSAIECVLDVVDLVLIMSVNPGFGGQSFIE 207 (281)
Q Consensus 137 aGAd~Itvh~E---a~~~~~i~~~l~~ik-~~G~k~Glai~p~-----t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~~ 207 (281)
+|||.+.+..- ..+.+.+.+..+.+- ..++.+.+=-+|. -+.+.+.++.+...++.+= .-.
T Consensus 98 ~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiK----------dss 167 (300)
T 3eb2_A 98 LGADGILAILEAYFPLKDAQIESYFRAIADAVEIPVVIYTNPQFQRSDLTLDVIARLAEHPRIRYIK----------DAS 167 (300)
T ss_dssp HTCSEEEEEECCSSCCCHHHHHHHHHHHHHHCSSCEEEEECTTTCSSCCCHHHHHHHHTSTTEEEEE----------ECS
T ss_pred cCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECccccCCCCCHHHHHHHHcCCCEEEEE----------cCC
Confidence 89998887622 111233444444443 3467777665664 2446677765444444321 111
Q ss_pred hHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEccc
Q 023494 208 SQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSA 256 (281)
Q Consensus 208 ~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSa 256 (281)
..+.++.++++..++ ++.+ =.|-.. .+-.....|++.+|.|.+
T Consensus 168 gd~~~~~~~~~~~~~---~f~v--~~G~d~-~~~~~l~~G~~G~is~~a 210 (300)
T 3eb2_A 168 TNTGRLLSIINRCGD---ALQV--FSASAH-IPAAVMLIGGVGWMAGPA 210 (300)
T ss_dssp SBHHHHHHHHHHHGG---GSEE--EECTTS-CHHHHHHTTCCEEEEGGG
T ss_pred CCHHHHHHHHHHcCC---CeEE--EeCcHH-HHHHHHhCCCCEEEeChh
Confidence 124556666655443 2443 334333 455667899999999966
No 398
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=86.52 E-value=1 Score=38.97 Aligned_cols=122 Identities=14% Similarity=0.098 Sum_probs=65.1
Q ss_pred EeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCC
Q 023494 60 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGA 139 (281)
Q Consensus 60 i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGA 139 (281)
+-.-++-.|+ ++.++.+.++|+|++|+=.. ++ +. ..-.+.++.+++ .+..+-+-+-..+|...++.+.+ ++
T Consensus 65 ~~vhlmv~dp---~~~i~~~~~aGadgv~vh~e--~~-~~-~~~~~~~~~i~~-~g~~~gv~~~p~t~~e~~~~~~~-~~ 135 (230)
T 1tqj_A 65 LDVHLMIVEP---EKYVEDFAKAGADIISVHVE--HN-AS-PHLHRTLCQIRE-LGKKAGAVLNPSTPLDFLEYVLP-VC 135 (230)
T ss_dssp EEEEEESSSG---GGTHHHHHHHTCSEEEEECS--TT-TC-TTHHHHHHHHHH-TTCEEEEEECTTCCGGGGTTTGG-GC
T ss_pred EEEEEEccCH---HHHHHHHHHcCCCEEEECcc--cc-cc-hhHHHHHHHHHH-cCCcEEEEEeCCCcHHHHHHHHh-cC
Confidence 3333444565 45678888899999988311 00 21 234467777776 35555554433556555544443 89
Q ss_pred CEEEEccccc-----c-cccHHHHHHHHHH----c--CCcEEEE--ECCCCCHHHHHHhhc-cCCEEEEE
Q 023494 140 DIVSVHCEQS-----S-TIHLHRTLNQIKD----L--GAKAGVV--LNPATSLSAIECVLD-VVDLVLIM 194 (281)
Q Consensus 140 d~Itvh~Ea~-----~-~~~i~~~l~~ik~----~--G~k~Gla--i~p~t~ie~~~~~l~-~vD~Ilvm 194 (281)
|+|.+..-.. . .+...+.++.+|+ + ++.+.+. |++ +.+.++.. .+|.+.+.
T Consensus 136 D~v~~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~----~~~~~~~~aGad~vvvG 201 (230)
T 1tqj_A 136 DLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKP----NNTWQVLEAGANAIVAG 201 (230)
T ss_dssp SEEEEESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCT----TTTHHHHHHTCCEEEES
T ss_pred CEEEEEEeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCH----HHHHHHHHcCCCEEEEC
Confidence 9996653211 0 1122333444443 3 3444443 444 33445544 58988774
No 399
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=86.42 E-value=7.2 Score=34.82 Aligned_cols=167 Identities=18% Similarity=0.147 Sum_probs=92.7
Q ss_pred HHHHHcCCCeEEEE---e-eeCcccccc-----cCCHHHHHHcCcCCCCCeeEEEEec---Chh---hHHHHHHHcCCCE
Q 023494 77 KAVELAGCDWIHVD---V-MDGRFVPNI-----TIGPLVVDALRPVTDLPLDVHLMIV---EPE---QRVPDFIKAGADI 141 (281)
Q Consensus 77 ~~l~~~G~d~iHiD---I-mDG~fvpn~-----~~G~~~I~~ir~~t~~~idaHLmv~---dp~---~~i~~~~~aGAd~ 141 (281)
+.++++|.|.+-+- + +--++ |.. ..=...++.|...++.|+.+|+=.- +|. +.+..+.++|+..
T Consensus 30 ~~~~~aG~~ai~vsg~s~a~~~G~-pD~~~vt~~em~~~~~~I~~~~~~pviaD~d~Gyg~~~~~~~~~v~~l~~aGaag 108 (275)
T 2ze3_A 30 RLLEAAGFTAIGTTSAGIAHARGR-TDGQTLTRDEMGREVEAIVRAVAIPVNADIEAGYGHAPEDVRRTVEHFAALGVAG 108 (275)
T ss_dssp HHHHHHTCSCEEECHHHHHHHSCC-CSSSSSCHHHHHHHHHHHHHHCSSCEEEECTTCSSSSHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHcCCCEEEECcHHHHHhCCC-CCCCCCCHHHHHHHHHHHHhhcCCCEEeecCCCCCCCHHHHHHHHHHHHHcCCcE
Confidence 34556788887663 0 00011 221 1122345556555678888888663 564 3467788999999
Q ss_pred EEEcccc-------cccccHHHHHHHHHHc----CCcEEEEECCCC-----------CH----HHHHHhhc-cCCEEEEE
Q 023494 142 VSVHCEQ-------SSTIHLHRTLNQIKDL----GAKAGVVLNPAT-----------SL----SAIECVLD-VVDLVLIM 194 (281)
Q Consensus 142 Itvh~Ea-------~~~~~i~~~l~~ik~~----G~k~Glai~p~t-----------~i----e~~~~~l~-~vD~Ilvm 194 (281)
|.+-.-. .+.++..+.++.+++. |...-+--..+. .+ ++.+.|.+ .+|.|.+
T Consensus 109 v~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~~ai~Ra~ay~eAGAd~i~~- 187 (275)
T 2ze3_A 109 VNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLAETVRRGQAYADAGADGIFV- 187 (275)
T ss_dssp EEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHHHHHHHHHHHHHTTCSEEEC-
T ss_pred EEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHHHHHHHHHHHHHCCCCEEEE-
Confidence 8765321 0112344556666555 776544332222 12 23333434 4788764
Q ss_pred eecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEcccccCC
Q 023494 195 SVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGA 260 (281)
Q Consensus 195 sV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a 260 (281)
+|.. ..+.++++.+.+ ++|+.+-++-..-+..++.+.|+..++.|...|.+
T Consensus 188 ---e~~~-------~~~~~~~i~~~~-----~~P~n~~~~~~~~~~~eL~~lGv~~v~~~~~~~ra 238 (275)
T 2ze3_A 188 ---PLAL-------QSQDIRALADAL-----RVPLNVMAFPGSPVPRALLDAGAARVSFGQSLMLA 238 (275)
T ss_dssp ---TTCC-------CHHHHHHHHHHC-----SSCEEEECCTTSCCHHHHHHTTCSEEECTTHHHHH
T ss_pred ---CCCC-------CHHHHHHHHHhc-----CCCEEEecCCCCCCHHHHHHcCCcEEEEChHHHHH
Confidence 3321 123344444443 25665554433446789999999999999887754
No 400
>2i14_A Nicotinate-nucleotide pyrophosphorylase; ligand binding, phosphoribosylpyrophosphate, Zn metal ION, structural genomics, PSI; HET: PCP; 2.90A {Pyrococcus furiosus} SCOP: c.1.17.1 d.41.2.1
Probab=86.42 E-value=0.58 Score=44.19 Aligned_cols=50 Identities=24% Similarity=0.316 Sum_probs=39.7
Q ss_pred HHHHHHHHHHhhhcCC-CCeEEEecCCChhcHHHHHHcCCcEEEEcccccCC
Q 023494 210 VKKISDLRRMCLEKGV-NPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGA 260 (281)
Q Consensus 210 l~kI~~lr~l~~~~~~-~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a 260 (281)
.+-++++++.+++.+. +..|++-||||++++..+.+. +|.|-+|+.+.++
T Consensus 251 ~~~v~~~r~~ld~~G~~~~~I~aSggl~~~~i~~l~~~-vD~~gvGt~l~~~ 301 (395)
T 2i14_A 251 RKIIEEVRWELKVRGYDWVKIFVSGGLDEEKIKEIVDV-VDAFGVGGAIASA 301 (395)
T ss_dssp HHHHHHHHHHHHHTTCCSCEEEEESSCCHHHHHTTGGG-CSEEEECHHHHTC
T ss_pred HHHHHHHHHHHHhCCCCceEEEEECCCCHHHHHHHHHh-CCEEEeCcccCCC
Confidence 4445666666665442 478999999999999999999 9999999987753
No 401
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=86.39 E-value=9.1 Score=33.66 Aligned_cols=130 Identities=16% Similarity=0.087 Sum_probs=73.9
Q ss_pred eEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccc--cCCHHHHHHcCc---CCCCCee---EEE-------E
Q 023494 59 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNI--TIGPLVVDALRP---VTDLPLD---VHL-------M 123 (281)
Q Consensus 59 ~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~--~~G~~~I~~ir~---~t~~~id---aHL-------m 123 (281)
+|.-+..+.-...+++.++.+.+.|.+.|++..- +.+.+.- ......++++|+ ..++.+. +|+ -
T Consensus 4 klg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~g~~~~~p 82 (340)
T 2zds_A 4 NFTLFTGQWADLPLEEVCRLARDFGYDGLELACW-GDHFEVDKALADPSYVDSRHQLLDKYGLKCWAISNHLVGQAVCDA 82 (340)
T ss_dssp CEEEESGGGTTSCHHHHHHHHHHHTCSEEEEESS-TTTCCHHHHHHCTTHHHHHHHHHHHTTCEEEEEEEHHHHHHHHCS
T ss_pred ceEEeecccCCCCHHHHHHHHHHcCCCEEEeccc-cccCCccccccCHHHHHHHHHHHHHcCCeEEEeeccccccccccc
Confidence 4555555544568899999999999999988642 2222210 011222333333 2455543 232 0
Q ss_pred -------------e-c--Chh-----------hHHHHHHHcCCCEEEEcccccc----------------------cccH
Q 023494 124 -------------I-V--EPE-----------QRVPDFIKAGADIVSVHCEQSS----------------------TIHL 154 (281)
Q Consensus 124 -------------v-~--dp~-----------~~i~~~~~aGAd~Itvh~Ea~~----------------------~~~i 154 (281)
+ . +|. +.++.+.+.|+..|.+|.-... .+.+
T Consensus 83 ~~~~~~~~~~~~~l~~~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 162 (340)
T 2zds_A 83 IIDERHEAILPARIWGDGDAEGVRQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFADRW 162 (340)
T ss_dssp CCSHHHHHHSCHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHHHHHHH
Confidence 0 1 331 2355567889999999842100 0124
Q ss_pred HHHHHHHHHcCCcEEEEECCCC---CHHHHHHhhccCC
Q 023494 155 HRTLNQIKDLGAKAGVVLNPAT---SLSAIECVLDVVD 189 (281)
Q Consensus 155 ~~~l~~ik~~G~k~Glai~p~t---~ie~~~~~l~~vD 189 (281)
.++.+.++++|+++++--.+.+ ..+.+..+++.++
T Consensus 163 ~~l~~~a~~~Gv~l~lEn~~~~~~~~~~~~~~ll~~v~ 200 (340)
T 2zds_A 163 NPILDVFDAEGVRFAHEVHPSEIAYDYWTTHRALEAVG 200 (340)
T ss_dssp HHHHHHHHHHTCEEEEECCTTSSCCSHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCEEEEEcCCCcccCCHHHHHHHHHhcC
Confidence 4556667788999888766543 4556667777664
No 402
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=86.38 E-value=1.5 Score=36.89 Aligned_cols=57 Identities=14% Similarity=0.167 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHhhhcCCCCeEEEecCCCh--hcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHH
Q 023494 209 QVKKISDLRRMCLEKGVNPWIEVDGGVGP--KNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKT 272 (281)
Q Consensus 209 ~l~kI~~lr~l~~~~~~~~~I~VDGGI~~--e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~ 272 (281)
.++.++++++.. +.++.|++.++. +.+..+.++|+|.+.++..-. +.+.+.++.+++
T Consensus 49 g~~~i~~i~~~~-----~~~~~v~l~v~d~~~~i~~~~~~gad~v~vh~~~~--~~~~~~~~~~~~ 107 (220)
T 2fli_A 49 GADVVASMRKHS-----KLVFDCHLMVVDPERYVEAFAQAGADIMTIHTEST--RHIHGALQKIKA 107 (220)
T ss_dssp CHHHHHHHHTTC-----CSEEEEEEESSSGGGGHHHHHHHTCSEEEEEGGGC--SCHHHHHHHHHH
T ss_pred CHHHHHHHHHhC-----CCCEEEEEeecCHHHHHHHHHHcCCCEEEEccCcc--ccHHHHHHHHHH
Confidence 355566665543 357889999983 468999999999999985543 567777777765
No 403
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=86.34 E-value=2.8 Score=36.53 Aligned_cols=135 Identities=9% Similarity=0.049 Sum_probs=66.6
Q ss_pred HHcCcCCCCCeeEEEEecCh--hh---HHHHHHHcCCCEEEEccccc---------------------ccccHHHHHHHH
Q 023494 108 DALRPVTDLPLDVHLMIVEP--EQ---RVPDFIKAGADIVSVHCEQS---------------------STIHLHRTLNQI 161 (281)
Q Consensus 108 ~~ir~~t~~~idaHLmv~dp--~~---~i~~~~~aGAd~Itvh~Ea~---------------------~~~~i~~~l~~i 161 (281)
+.+|+.-...+...++..|| .. .++.+.++|+|++.+..-.. ......+.++.+
T Consensus 10 ~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~i 89 (262)
T 1rd5_A 10 AALMAKGKTAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREV 89 (262)
T ss_dssp HHHHHTTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred HHHHhcCCceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 33433323457777888888 33 35567789999999963210 011123566667
Q ss_pred HHc-CCcEEEEECCCCCHH--HHHHhhc-cCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCCh
Q 023494 162 KDL-GAKAGVVLNPATSLS--AIECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGP 237 (281)
Q Consensus 162 k~~-G~k~Glai~p~t~ie--~~~~~l~-~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~ 237 (281)
|+. ++.+.+....+ +.. .++...+ .+|.|.+. . . +. +.++++.+...++|....+.+.-.-..
T Consensus 90 r~~~~~Pv~~m~~~~-~~~~~~~~~a~~aGadgv~v~----d--~-~~-----~~~~~~~~~~~~~g~~~i~~~a~~t~~ 156 (262)
T 1rd5_A 90 TPELSCPVVLLSYYK-PIMFRSLAKMKEAGVHGLIVP----D--L-PY-----VAAHSLWSEAKNNNLELVLLTTPAIPE 156 (262)
T ss_dssp GGGCSSCEEEECCSH-HHHSCCTHHHHHTTCCEEECT----T--C-BT-----TTHHHHHHHHHHTTCEECEEECTTSCH
T ss_pred HhcCCCCEEEEecCc-HHHHHHHHHHHHcCCCEEEEc----C--C-Ch-----hhHHHHHHHHHHcCCceEEEECCCCCH
Confidence 665 45555432111 110 0111222 47776541 1 1 11 123444444444443333334433445
Q ss_pred hcHHHHHHcCCcEEEEcc
Q 023494 238 KNAYKVIEAGANALVAGS 255 (281)
Q Consensus 238 e~i~~~~~aGAD~~VvGS 255 (281)
+.+..+.+.+.+.+.+++
T Consensus 157 e~~~~~~~~~~g~v~~~s 174 (262)
T 1rd5_A 157 DRMKEITKASEGFVYLVS 174 (262)
T ss_dssp HHHHHHHHHCCSCEEEEC
T ss_pred HHHHHHHhcCCCeEEEec
Confidence 666777777776555554
No 404
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=86.26 E-value=3.4 Score=37.34 Aligned_cols=95 Identities=17% Similarity=0.261 Sum_probs=54.8
Q ss_pred CccCHHHHHHHHHHcCCCeEEEEeeeCccccc---c------cCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcC
Q 023494 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPN---I------TIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAG 138 (281)
Q Consensus 68 D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn---~------~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aG 138 (281)
|+....+..+.+.+.|+|+|-|... ..-|. + .-=..+|+.+++. +.|+-+ =+.+|. .++.+.++|
T Consensus 44 ~~~~a~~~a~~~v~~GAdiIDIGge--STrPga~~v~~~eE~~Rv~pvi~~l~~~-~vpiSI--DT~~~~-Va~aAl~aG 117 (294)
T 2y5s_A 44 ARDDALRRAERMIAEGADLLDIGGE--STRPGAPPVPLDEELARVIPLVEALRPL-NVPLSI--DTYKPA-VMRAALAAG 117 (294)
T ss_dssp CTTHHHHHHHHHHHTTCSEEEEESS--CCSTTCCCCCHHHHHHHHHHHHHHHGGG-CSCEEE--ECCCHH-HHHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCC--cCCCCCCCCCHHHHHHHHHHHHHHHhhC-CCeEEE--ECCCHH-HHHHHHHcC
Confidence 4444555566777889998644321 11232 1 1112344555543 556544 445655 677788899
Q ss_pred CCEEE-EcccccccccHHHHHHHHHHcCCcEEEEEC
Q 023494 139 ADIVS-VHCEQSSTIHLHRTLNQIKDLGAKAGVVLN 173 (281)
Q Consensus 139 Ad~It-vh~Ea~~~~~i~~~l~~ik~~G~k~Glai~ 173 (281)
|++|- +..+. ..+.+..++++|+.+.+.-+
T Consensus 118 a~iINdVsg~~-----d~~m~~~~a~~~~~vVlmh~ 148 (294)
T 2y5s_A 118 ADLINDIWGFR-----QPGAIDAVRDGNSGLCAMHM 148 (294)
T ss_dssp CSEEEETTTTC-----STTHHHHHSSSSCEEEEECC
T ss_pred CCEEEECCCCC-----chHHHHHHHHhCCCEEEECC
Confidence 99884 33331 22567788889987776543
No 405
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=86.17 E-value=2.6 Score=41.81 Aligned_cols=151 Identities=12% Similarity=0.117 Sum_probs=87.8
Q ss_pred CCCCeeEEEEec-ChhhHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHcCC-cEEEE--ECCCCCHHHHHHhhccCC
Q 023494 114 TDLPLDVHLMIV-EPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGA-KAGVV--LNPATSLSAIECVLDVVD 189 (281)
Q Consensus 114 t~~~idaHLmv~-dp~~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~-k~Gla--i~p~t~ie~~~~~l~~vD 189 (281)
++..++.--++. |+ ..++...+.|+|+|.+..-. +.+++.++.+.+++.|. .+.+. |....-++.+.+++...|
T Consensus 162 Pg~~~~lp~ltekD~-~di~~~l~~g~d~v~~sfV~-~a~dv~~~~~~l~~~~~~~~~iiakIE~~eav~nldeIl~~~D 239 (587)
T 2e28_A 162 PGVKVNLPGITEKDR-ADILFGIRQGIDFIAASFVR-RASDVLEIRELLEAHDALHIQIIAKIENEEGVANIDEILEAAD 239 (587)
T ss_dssp TTSCCCCCSCCHHHH-HHHHHHHHHTCSEEEESSCC-SHHHHHHHHHHHHHTTCTTSEEEEEECSHHHHHTHHHHHHHSS
T ss_pred CCCcCCCCCCCcccH-HHHHHHHHcCCCEEEECCCC-CHHHHHHHHHHHHHcCCCCceEEEEECCHHHHHhHHHHHHhCC
Confidence 444455444443 33 34677889999999999765 36778888888888874 45444 543345577888888899
Q ss_pred EEEEEe----ecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecC----------CChhcHHHHHH---cCCcEEE
Q 023494 190 LVLIMS----VNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGG----------VGPKNAYKVIE---AGANALV 252 (281)
Q Consensus 190 ~Ilvms----V~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGG----------I~~e~i~~~~~---aGAD~~V 252 (281)
.|++-. ++-|+ ++...-.+++.+.++..| .++.++-= -+...+..+.. -|+|.+.
T Consensus 240 gImVargDLgvei~~------~~v~~~qk~ii~~~~~~g--kpvi~ATQmLeSMi~~p~PTRAE~sDvanav~dG~DavM 311 (587)
T 2e28_A 240 GLMVARGDLGVEIPA------EEVPLIQKLLIKKSNMLG--KPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAVM 311 (587)
T ss_dssp EEEEEHHHHHHHSCG------GGHHHHHHHHHHHHHHHT--CCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEE
T ss_pred EEEEcCchhhhhcCH------HHHHHHHHHHHHHHHHcC--CCeEEechhhHhhccCCCccHHHHhccchhhhhCcceee
Confidence 998743 33232 333333344444444433 24433221 12223334444 4999998
Q ss_pred EcccccCCCCHHHHHHHHHHhc
Q 023494 253 AGSAVFGAKDYAEAIKGIKTSK 274 (281)
Q Consensus 253 vGSaIf~a~dp~~~~~~l~~~~ 274 (281)
+...=-.-.-|.++++.|.+.+
T Consensus 312 LSgETA~G~yPveaV~~m~~I~ 333 (587)
T 2e28_A 312 LSGETAAGQYPVEAVKTMHQIA 333 (587)
T ss_dssp ESHHHHTCSCHHHHHHHHHHHH
T ss_pred ecccccCCCCHHHHHHHHHHHH
Confidence 7522222245777777776643
No 406
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=86.14 E-value=1.1 Score=39.12 Aligned_cols=73 Identities=19% Similarity=0.338 Sum_probs=51.9
Q ss_pred EEEecChhh-----HHHHHHHcCCCEEEEccccc-ccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCCEEEEE
Q 023494 121 HLMIVEPEQ-----RVPDFIKAGADIVSVHCEQS-STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIM 194 (281)
Q Consensus 121 HLmv~dp~~-----~i~~~~~aGAd~Itvh~Ea~-~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD~Ilvm 194 (281)
|+..-||.+ .++.+.+.|+|.|.+..... ..++..++++.+|+.++.+ .+-|..+ ..+.+.+|.+++|
T Consensus 9 h~~~iDPdk~~~~~~~~~~~~~GtD~i~vGGs~gvt~~~~~~~v~~ik~~~~Pv--vlfp~~~----~~v~~gaD~~l~p 82 (228)
T 3vzx_A 9 HVFKLDPNKDLPDEQLEILCESGTDAVIIGGSDGVTEDNVLRMMSKVRRFLVPC--VLEVSAI----EAIVPGFDLYFIP 82 (228)
T ss_dssp EEEEECTTSCCCTTHHHHHHTSSCSEEEECCCSCCCHHHHHHHHHHHTTSSSCE--EEECSCG----GGCCSCCSEEEEE
T ss_pred EEEeECCCCCCCHHHHHHHHHcCCCEEEECCcCCCCHHHHHHHHHHhhccCCCE--EEeCCCH----HHccccCCEEEEe
Confidence 667778864 56777899999999998752 2346778888888754444 4455553 2456789999999
Q ss_pred eecCC
Q 023494 195 SVNPG 199 (281)
Q Consensus 195 sV~pG 199 (281)
++-.+
T Consensus 83 slln~ 87 (228)
T 3vzx_A 83 SVLNS 87 (228)
T ss_dssp EETTB
T ss_pred eecCC
Confidence 88654
No 407
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=86.13 E-value=2.7 Score=39.18 Aligned_cols=115 Identities=10% Similarity=0.056 Sum_probs=73.4
Q ss_pred ChhhHHHH---HHHcCCCEEEEccc-----cc------------------ccccHHHHHHHHHH-c--CCcEEEEECCCC
Q 023494 126 EPEQRVPD---FIKAGADIVSVHCE-----QS------------------STIHLHRTLNQIKD-L--GAKAGVVLNPAT 176 (281)
Q Consensus 126 dp~~~i~~---~~~aGAd~Itvh~E-----a~------------------~~~~i~~~l~~ik~-~--G~k~Glai~p~t 176 (281)
+|+.+.+. +.+.|.+.+=+|.. .. ..+...+.++++|+ . ++.+.+..|...
T Consensus 150 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~ 229 (410)
T 2gl5_A 150 TPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAMGDDADIIVEIHSLL 229 (410)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhcCCCCEEEEECCCCC
Confidence 67766543 56789999999852 10 01224467777777 3 466777778777
Q ss_pred CHHHHHHhhcc---CCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEE
Q 023494 177 SLSAIECVLDV---VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANAL 251 (281)
Q Consensus 177 ~ie~~~~~l~~---vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~ 251 (281)
..+...++++. .+... ++ |++.+..++-.+++++.. +++|..|+.+. ++.+.++++.| +|++
T Consensus 230 ~~~~ai~~~~~l~~~~i~~---iE-----~P~~~~~~~~~~~l~~~~-----~iPIa~dE~~~~~~~~~~~i~~~~~d~v 296 (410)
T 2gl5_A 230 GTNSAIQFAKAIEKYRIFL---YE-----EPIHPLNSDNMQKVSRST-----TIPIATGERSYTRWGYRELLEKQSIAVA 296 (410)
T ss_dssp CHHHHHHHHHHHGGGCEEE---EE-----CSSCSSCHHHHHHHHHHC-----SSCEEECTTCCTTHHHHHHHHTTCCSEE
T ss_pred CHHHHHHHHHHHHhcCCCe---EE-----CCCChhhHHHHHHHHhhC-----CCCEEecCCcCCHHHHHHHHHcCCCCEE
Confidence 77665555443 23222 22 445555566666666543 47999999986 78888888877 6877
Q ss_pred EE
Q 023494 252 VA 253 (281)
Q Consensus 252 Vv 253 (281)
.+
T Consensus 297 ~i 298 (410)
T 2gl5_A 297 QP 298 (410)
T ss_dssp CC
T ss_pred ec
Confidence 54
No 408
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=86.02 E-value=1.6 Score=38.87 Aligned_cols=155 Identities=17% Similarity=0.220 Sum_probs=83.1
Q ss_pred HHcCcCCCCCeeEEEEecCh--h---hHHHHHHHcCCCEEEEccccc-c---cc-----------------cHHHHHHHH
Q 023494 108 DALRPVTDLPLDVHLMIVEP--E---QRVPDFIKAGADIVSVHCEQS-S---TI-----------------HLHRTLNQI 161 (281)
Q Consensus 108 ~~ir~~t~~~idaHLmv~dp--~---~~i~~~~~aGAd~Itvh~Ea~-~---~~-----------------~i~~~l~~i 161 (281)
+++|+.-.+.+..+++.-|| + ++++.+.++|||++.+...-+ + -. +..+.++.+
T Consensus 10 ~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~i 89 (267)
T 3vnd_A 10 AALKAQDKGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKV 89 (267)
T ss_dssp HHHHHHTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 33443334668888888999 3 346667889999999983211 0 11 123566667
Q ss_pred HHc--CCcEEEEE--CC--CCCHHHHHH-hhc-cCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEec
Q 023494 162 KDL--GAKAGVVL--NP--ATSLSAIEC-VLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDG 233 (281)
Q Consensus 162 k~~--G~k~Glai--~p--~t~ie~~~~-~l~-~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDG 233 (281)
|+. .+.+.+.. || .+.++.+.+ +.+ .+|.+++... ++ +...++++.+.++|.+.-..+..
T Consensus 90 r~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dl-------p~-----ee~~~~~~~~~~~gl~~i~liaP 157 (267)
T 3vnd_A 90 RAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADV-------PV-----EESAPFSKAAKAHGIAPIFIAPP 157 (267)
T ss_dssp HHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTS-------CG-----GGCHHHHHHHHHTTCEEECEECT
T ss_pred HhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCC-------CH-----hhHHHHHHHHHHcCCeEEEEECC
Confidence 765 34555542 32 122333222 222 3787766211 11 22445555555555543334555
Q ss_pred CCChhcHHHHHHcCCcEEEEc--ccccCC-----CCHHHHHHHHHHhc
Q 023494 234 GVGPKNAYKVIEAGANALVAG--SAVFGA-----KDYAEAIKGIKTSK 274 (281)
Q Consensus 234 GI~~e~i~~~~~aGAD~~VvG--SaIf~a-----~dp~~~~~~l~~~~ 274 (281)
.-+.+.++.+.+.+.+.+-.- ...++. ++..+.++++|+..
T Consensus 158 ~t~~eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~ 205 (267)
T 3vnd_A 158 NADADTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEFN 205 (267)
T ss_dssp TCCHHHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHTTT
T ss_pred CCCHHHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhc
Confidence 556788888888865554442 224443 23456677777654
No 409
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=85.98 E-value=3 Score=39.38 Aligned_cols=117 Identities=20% Similarity=0.182 Sum_probs=66.2
Q ss_pred HHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEcccccc--
Q 023494 73 GEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSS-- 150 (281)
Q Consensus 73 ~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~~-- 150 (281)
.+.++.+.++|+|.|-+|...|+ | ..-++.++++|+..+.++.+. -+.+ .+..+.+.++|||.|.++.+..+
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~--~--~~~~e~I~~ik~~~~i~Vi~g-~V~t-~e~A~~a~~aGAD~I~vG~g~Gs~~ 219 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGH--S--LNIIRTLKEIKSKMNIDVIVG-NVVT-EEATKELIENGADGIKVGIGPGSIC 219 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCS--B--HHHHHHHHHHHTTCCCEEEEE-EECS-HHHHHHHHHTTCSEEEECC------
T ss_pred HHHHHHHHHcCCCEEEEeCCCCC--c--ccHHHHHHHHHhcCCCeEEEe-ecCC-HHHHHHHHHcCCCEEEEeCCCCcCc
Confidence 57789999999999877755442 1 011467788877556666552 2333 33667788999999999543210
Q ss_pred ---------cccHHHHHHHH----HHcCCcEEEEECCCCCHHHHHHhhc-cCCEEEEEeec
Q 023494 151 ---------TIHLHRTLNQI----KDLGAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVN 197 (281)
Q Consensus 151 ---------~~~i~~~l~~i----k~~G~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~ 197 (281)
..++ ..+..+ ++.++.+..+ .-=...+.+.+.+. .+|.|.+.+..
T Consensus 220 ~tr~~~g~g~p~~-~al~~v~~~~~~~~IPVIA~-GGI~~~~di~kalalGAd~V~vGt~f 278 (400)
T 3ffs_A 220 TTRIVAGVGVPQI-TAIEKCSSVASKFGIPIIAD-GGIRYSGDIGKALAVGASSVMIGSIL 278 (400)
T ss_dssp ---CCSCBCCCHH-HHHHHHHHHHTTTTCCEEEE-SCCCSHHHHHHHHTTTCSEEEECGGG
T ss_pred ccccccccchhHH-HHHHHHHHHHHhcCCCEEec-CCCCCHHHHHHHHHcCCCEEEEChHH
Confidence 1122 223333 3345444332 11123444555544 58999876543
No 410
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=85.83 E-value=4 Score=37.93 Aligned_cols=127 Identities=11% Similarity=0.101 Sum_probs=82.5
Q ss_pred CCeeEEEE--ecChhhHHH---HHHHcCCCEEEEcccccccccHHHHHHHHHHc---CCcEEEEECCCCCHHHHHHhhcc
Q 023494 116 LPLDVHLM--IVEPEQRVP---DFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL---GAKAGVVLNPATSLSAIECVLDV 187 (281)
Q Consensus 116 ~~idaHLm--v~dp~~~i~---~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~---G~k~Glai~p~t~ie~~~~~l~~ 187 (281)
+++.+.+. ..+|+.+.+ .+.+.|.+.+=++.-. +.+.-.+.++++|+. ++.+.+..|.....+....+++.
T Consensus 139 v~~y~~~~~~~~~~e~~~~~a~~~~~~G~~~iKiKvG~-~~~~d~~~v~avR~a~g~d~~l~vDan~~~~~~~A~~~~~~ 217 (389)
T 3ozy_A 139 VRAYASSIYWDLTPDQAADELAGWVEQGFTAAKLKVGR-APRKDAANLRAMRQRVGADVEILVDANQSLGRHDALAMLRI 217 (389)
T ss_dssp EEEEEEEECSSCCHHHHHHHHHHHHHTTCSEEEEECCS-CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHH
T ss_pred eeeEEecCCCCCCHHHHHHHHHHHHHCCCCEEeeccCC-CHHHHHHHHHHHHHHcCCCceEEEECCCCcCHHHHHHHHHH
Confidence 55666552 467776644 4567899999998643 123344567777763 56778888888887765555432
Q ss_pred -----CCEEEEEeecCCCCCCccchhHHHHHHHHH-HHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEEccccc
Q 023494 188 -----VDLVLIMSVNPGFGGQSFIESQVKKISDLR-RMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVAGSAVF 258 (281)
Q Consensus 188 -----vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr-~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~VvGSaIf 258 (281)
+++| .|++.+..++-+++++ + ..+++|..|+.+. ++.+..+++.| +|++.+--.-.
T Consensus 218 l~~~~i~~i----------EqP~~~~d~~~~~~l~~~-----~~~iPIa~dE~i~~~~~~~~~i~~~~~d~v~ik~~~~ 281 (389)
T 3ozy_A 218 LDEAGCYWF----------EEPLSIDDIEGHRILRAQ-----GTPVRIATGENLYTRNAFNDYIRNDAIDVLQADASRA 281 (389)
T ss_dssp HHHTTCSEE----------ESCSCTTCHHHHHHHHTT-----CCSSEEEECTTCCHHHHHHHHHHTTCCSEECCCTTTS
T ss_pred HHhcCCCEE----------ECCCCcccHHHHHHHHhc-----CCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCcccc
Confidence 4444 2556555565566655 3 2358999999998 67888888765 78887654433
No 411
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=85.73 E-value=17 Score=32.83 Aligned_cols=172 Identities=16% Similarity=0.165 Sum_probs=97.6
Q ss_pred ccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCH----HHHHHcCcC--CCCCeeEEEEecChhh---HHHHHHH
Q 023494 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGP----LVVDALRPV--TDLPLDVHLMIVEPEQ---RVPDFIK 136 (281)
Q Consensus 66 a~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~----~~I~~ir~~--t~~~idaHLmv~dp~~---~i~~~~~ 136 (281)
..|+..+++.++.+.+.|++-+-+ =|+.--..++.. ++++...+. -..|+.++.-.++..+ +.+.+.+
T Consensus 41 ~iD~~~l~~lv~~li~~Gv~Gi~v---~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~ 117 (315)
T 3na8_A 41 GLDLPALGRSIERLIDGGVHAIAP---LGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAES 117 (315)
T ss_dssp SBCHHHHHHHHHHHHHTTCSEEEC---SSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEE---CccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHh
Confidence 467778889999999999997632 233222233333 344444432 2478999877666654 4556778
Q ss_pred cCCCEEEEcccc---cccccHHHHHHHHHH-cCCcEEEEECC-----CCCHHHHHHh-hccCCEEEEEeecCCCCCCccc
Q 023494 137 AGADIVSVHCEQ---SSTIHLHRTLNQIKD-LGAKAGVVLNP-----ATSLSAIECV-LDVVDLVLIMSVNPGFGGQSFI 206 (281)
Q Consensus 137 aGAd~Itvh~Ea---~~~~~i~~~l~~ik~-~G~k~Glai~p-----~t~ie~~~~~-l~~vD~IlvmsV~pG~~GQ~f~ 206 (281)
+|||.+.+..-. .+.+.+.+..+.+-+ .++.+.+=-+| +-+.+.+.++ .+...++.+= .-
T Consensus 118 ~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L~a~~pnIvgiK----------ds 187 (315)
T 3na8_A 118 LGAEAVMVLPISYWKLNEAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDMSVELILRIVREVDNVTMVK----------ES 187 (315)
T ss_dssp TTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHSTTEEEEE----------EC
T ss_pred cCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCcEEEEeCcchhCcCCCHHHHHHHHhcCCCEEEEE----------CC
Confidence 999999887321 112334444444433 46666665444 2355777777 4434444321 11
Q ss_pred hhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEccc
Q 023494 207 ESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSA 256 (281)
Q Consensus 207 ~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSa 256 (281)
...+.++.++++..+. ++.+- .|-. +.+-....+|++.+|.|.+
T Consensus 188 sgd~~~~~~~~~~~~~---~f~v~--~G~D-~~~l~~l~~G~~G~is~~a 231 (315)
T 3na8_A 188 TGDIQRMHKLRLLGEG---RVPFY--NGCN-PLALEAFVAGAKGWCSAAP 231 (315)
T ss_dssp SSCHHHHHHHHHHTTT---CSCEE--ECCG-GGHHHHHHHTCSEEEESGG
T ss_pred CCCHHHHHHHHHHcCC---CEEEE--eCch-HHHHHHHHCCCCEEEechh
Confidence 1124555555554432 34442 2333 2455667889999999965
No 412
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=85.69 E-value=1.4 Score=36.85 Aligned_cols=89 Identities=20% Similarity=0.166 Sum_probs=55.9
Q ss_pred ccCHHHHHHHHHHcCCCeEEEEee-eCc-ccccccCCHHHHHHcCcC-CCCCeeEEEEecChhhHHHHHHHcCCCEEEEc
Q 023494 69 FAKLGEQVKAVELAGCDWIHVDVM-DGR-FVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVH 145 (281)
Q Consensus 69 ~~~l~~~l~~l~~~G~d~iHiDIm-DG~-fvpn~~~G~~~I~~ir~~-t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh 145 (281)
+.+..+.++.+.+.|+|++.++.. +|. |. ..+.+.++++|+. ++.|+.+.-=+ +|. -+..+.++|||++.+.
T Consensus 113 ~~t~~~~~~~~~~~g~d~i~v~~g~~g~~~~---~~~~~~i~~l~~~~~~~~i~~~gGI-~~~-~~~~~~~~Gad~vvvG 187 (211)
T 3f4w_A 113 VDDLPARVRLLEEAGADMLAVHTGTDQQAAG---RKPIDDLITMLKVRRKARIAVAGGI-SSQ-TVKDYALLGPDVVIVG 187 (211)
T ss_dssp CSSHHHHHHHHHHHTCCEEEEECCHHHHHTT---CCSHHHHHHHHHHCSSCEEEEESSC-CTT-THHHHHTTCCSEEEEC
T ss_pred CCCHHHHHHHHHHcCCCEEEEcCCCcccccC---CCCHHHHHHHHHHcCCCcEEEECCC-CHH-HHHHHHHcCCCEEEEC
Confidence 446667788888899999887621 121 11 1256788888876 46666554434 343 5677889999999998
Q ss_pred ccccccccHHHHHHHHH
Q 023494 146 CEQSSTIHLHRTLNQIK 162 (281)
Q Consensus 146 ~Ea~~~~~i~~~l~~ik 162 (281)
-.-...+++.+.++.++
T Consensus 188 sai~~~~d~~~~~~~l~ 204 (211)
T 3f4w_A 188 SAITHAADPAGEARKIS 204 (211)
T ss_dssp HHHHTCSSHHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHH
Confidence 32111234555555554
No 413
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=85.68 E-value=3.5 Score=36.64 Aligned_cols=119 Identities=11% Similarity=0.094 Sum_probs=69.8
Q ss_pred ChhhHHHHHHHcCCCEEEEcccccccccH-HHHHHHHHHc-CCcEEEEECCCCCHHHHHHhhc-cCCEEEEEeecCC---
Q 023494 126 EPEQRVPDFIKAGADIVSVHCEQSSTIHL-HRTLNQIKDL-GAKAGVVLNPATSLSAIECVLD-VVDLVLIMSVNPG--- 199 (281)
Q Consensus 126 dp~~~i~~~~~aGAd~Itvh~Ea~~~~~i-~~~l~~ik~~-G~k~Glai~p~t~ie~~~~~l~-~vD~IlvmsV~pG--- 199 (281)
||.+....+.++| |+||+|.-. +..|+ .+-+..+++. ..+.-+-.+|.... +.-.++ .++.|.+..-.+.
T Consensus 26 dpv~aA~~ae~aG-dgITvHlRe-DrRHI~d~Dv~~L~~~~~~~lNlE~a~t~em--i~ial~~kP~~vtLVPEkreE~T 101 (260)
T 3o6c_A 26 DLLEAAFIVARHG-DQITLHVRE-DRRHAQDFDLENIIKFCKSPVNLECALNDEI--LNLALKLKPHRVTLVPEKREELT 101 (260)
T ss_dssp CHHHHHHHHHHHS-SEEEEECCT-TCSSSCHHHHHHHHHHCSSCEEEEECSCHHH--HHHHHHHCCSEEEECCCSGGGBC
T ss_pred CHHHHHHHHHHhC-CeEEEeeCC-CcccCCHHHHHHHHHHcCCCEEeecCCCHHH--HHHHHHcCCCEEEECCCCCCccC
Confidence 4555556677899 999999763 23333 2344455543 56777777764322 322233 4788877532221
Q ss_pred -CCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEE
Q 023494 200 -FGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVA 253 (281)
Q Consensus 200 -~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~Vv 253 (281)
-+|-.+ -.++|+.+.+.+.+.|..+-+=+|. .++.+....+.|||.+=+
T Consensus 102 TegGldv---~~~~L~~~i~~L~~~GIrVSLFIDp--d~~qi~aA~~~GAd~IEL 151 (260)
T 3o6c_A 102 TEGGLCL---NHAKLKQSIEKLQNANIEVSLFINP--SLEDIEKSKILKAQFIEL 151 (260)
T ss_dssp TTSSBCT---TCTTHHHHHHHHHHTTCEEEEEECS--CHHHHHHHHHTTCSEEEE
T ss_pred CCCChhh---CHHHHHHHHHHHHHCCCEEEEEeCC--CHHHHHHHHHhCCCEEEE
Confidence 133223 3344555555555555434455663 466899999999999887
No 414
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=85.66 E-value=5.1 Score=36.85 Aligned_cols=119 Identities=15% Similarity=0.077 Sum_probs=76.7
Q ss_pred cChhhHHH---HHHHcCCCEEEEcccccccccHHHHHHHHHHc---CCcEEEEECCCCCHHHHHHhhccCCEEEEEeecC
Q 023494 125 VEPEQRVP---DFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL---GAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNP 198 (281)
Q Consensus 125 ~dp~~~i~---~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~---G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~p 198 (281)
.+|+.+.+ .+.+.|.+.+=+|.-..+.....+.++++|+. ++.+.+..|.....+...++++..+ .-+ -+
T Consensus 144 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~-~~i-~i-- 219 (378)
T 2qdd_A 144 GTPDQMLGLIAEAAAQGYRTHSAKIGGSDPAQDIARIEAISAGLPDGHRVTFDVNRAWTPAIAVEVLNSVR-ARD-WI-- 219 (378)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHSCCTTCEEEEECTTCCCHHHHHHHHTSCC-CCC-EE--
T ss_pred CCHHHHHHHHHHHHHHhhhheeecCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHhC-CCc-EE--
Confidence 57776644 35678999999986531123345778888873 4667778887777777777766554 212 22
Q ss_pred CCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEEcccc
Q 023494 199 GFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVAGSAV 257 (281)
Q Consensus 199 G~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~VvGSaI 257 (281)
.|++. .++-++++++. .+++|..|+.+. ++.+..+++.| +|++.+--.-
T Consensus 220 ---EqP~~--d~~~~~~l~~~-----~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~ 270 (378)
T 2qdd_A 220 ---EQPCQ--TLDQCAHVARR-----VANPIMLDECLHEFSDHLAAWSRGACEGVKIKPNR 270 (378)
T ss_dssp ---ECCSS--SHHHHHHHHTT-----CCSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHH
T ss_pred ---EcCCC--CHHHHHHHHHh-----CCCCEEECCCcCCHHHHHHHHHhCCCCEEEecccc
Confidence 24443 34444444432 357999999986 77888877655 8988875443
No 415
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=85.63 E-value=19 Score=32.00 Aligned_cols=167 Identities=13% Similarity=0.063 Sum_probs=86.0
Q ss_pred ccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCH----HHHHHcCcCCCCCeeEEEEecChhhH---HHHHHHcC
Q 023494 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGP----LVVDALRPVTDLPLDVHLMIVEPEQR---VPDFIKAG 138 (281)
Q Consensus 66 a~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~----~~I~~ir~~t~~~idaHLmv~dp~~~---i~~~~~aG 138 (281)
..|+..+++.++.+.+.|++-+-+ =|+.--..++.. ++++...+..+- +.++.-.++..+- .+.+.++|
T Consensus 16 ~iD~~~l~~lv~~li~~Gv~gl~~---~GttGE~~~Ls~eEr~~v~~~~~~~~~g-viaGvg~~~t~~ai~la~~A~~~G 91 (293)
T 1w3i_A 16 RIDKEKLKIHAENLIRKGIDKLFV---NGTTGLGPSLSPEEKLENLKAVYDVTNK-IIFQVGGLNLDDAIRLAKLSKDFD 91 (293)
T ss_dssp SBCHHHHHHHHHHHHHTTCCEEEE---SSTTTTGGGSCHHHHHHHHHHHHTTCSC-EEEECCCSCHHHHHHHHHHGGGSC
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEE---CccccChhhCCHHHHHHHHHHHHHHcCC-EEEecCCCCHHHHHHHHHHHHhcC
Confidence 467778889999999999987633 243222233333 334444444333 6666655565543 44456678
Q ss_pred CCEEEEcccc----cccccHHHHHHHHHH-cCCcEEEEECCC-----CCHHHHHHhhccCCEEEEEeecCCCCCCccchh
Q 023494 139 ADIVSVHCEQ----SSTIHLHRTLNQIKD-LGAKAGVVLNPA-----TSLSAIECVLDVVDLVLIMSVNPGFGGQSFIES 208 (281)
Q Consensus 139 Ad~Itvh~Ea----~~~~~i~~~l~~ik~-~G~k~Glai~p~-----t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~~~ 208 (281)
||.+.+..=. .+.+.+.+..+.+-+ .++.+.+=-+|. -+.+.+.+ .+. ++.+ |.-..
T Consensus 92 adavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~-~pn--Ivgi----------Kds~g 158 (293)
T 1w3i_A 92 IVGIASYAPYYYPRMSEKHLVKYFKTLCEVSPHPVYLYNYPTATGKDIDAKVAKE-IGC--FTGV----------KDTIE 158 (293)
T ss_dssp CSEEEEECCCSCSSCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHH-HCC--EEEE----------EECCS
T ss_pred CCEEEEcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEEEECchhhCcCCCHHHHHh-cCC--EEEE----------EeCCC
Confidence 8887765211 112223333333332 355555544442 23344444 221 2211 11111
Q ss_pred HHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEccc
Q 023494 209 QVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSA 256 (281)
Q Consensus 209 ~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSa 256 (281)
.+.++.++++ .+ .++.+ ..| -. +.+-.....|++.+|.|.+
T Consensus 159 d~~~~~~~~~-~~---~~f~v-~~G-~d-~~~~~~l~~G~~G~is~~a 199 (293)
T 1w3i_A 159 NIIHTLDYKR-LN---PNMLV-YSG-SD-MLIATVASTGLDGNVAAGS 199 (293)
T ss_dssp CHHHHHHHHH-HC---TTSEE-EEC-CS-TTHHHHHHTTCCEEECGGG
T ss_pred CHHHHHHHHh-cC---CCEEE-EEc-cH-HHHHHHHHcCCCEEEeCHH
Confidence 2445555555 32 24544 333 33 3455667899999999965
No 416
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=85.60 E-value=5.8 Score=36.99 Aligned_cols=124 Identities=10% Similarity=0.058 Sum_probs=81.2
Q ss_pred CCeeEEE---EecChhhHHH----HHHHcCCCEEEEccccc------ccccHHHHHHHHHHc---CCcEEEEECCCCCHH
Q 023494 116 LPLDVHL---MIVEPEQRVP----DFIKAGADIVSVHCEQS------STIHLHRTLNQIKDL---GAKAGVVLNPATSLS 179 (281)
Q Consensus 116 ~~idaHL---mv~dp~~~i~----~~~~aGAd~Itvh~Ea~------~~~~i~~~l~~ik~~---G~k~Glai~p~t~ie 179 (281)
+++.+.+ ...+|+.+.+ .+.+.|...+=+..-.. ..+.-.+.++++|+. ++.+.+..|.....+
T Consensus 126 v~~y~s~~g~~~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~ 205 (393)
T 4dwd_A 126 LPCYSSIGGNAARSVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRELLGPDAVIGFDANNGYSVG 205 (393)
T ss_dssp EEEEEEECCCSSSCHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHHHCTTCCEEEECTTCCCHH
T ss_pred eeeEEecCccCCCCHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHH
Confidence 5566653 1356776644 44567999998876320 112234566777764 567888888888887
Q ss_pred HHHHhhcc-----CCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcCCcEEEE
Q 023494 180 AIECVLDV-----VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAGANALVA 253 (281)
Q Consensus 180 ~~~~~l~~-----vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aGAD~~Vv 253 (281)
....+++. +++| .|++.+..++-++++++.. +++|..|+.+. .+.+..+++.|+|++.+
T Consensus 206 ~A~~~~~~L~~~~i~~i----------EqP~~~~d~~~~~~l~~~~-----~iPIa~dE~~~~~~~~~~~i~~~~d~v~~ 270 (393)
T 4dwd_A 206 GAIRVGRALEDLGYSWF----------EEPVQHYHVGAMGEVAQRL-----DITVSAGEQTYTLQALKDLILSGVRMVQP 270 (393)
T ss_dssp HHHHHHHHHHHTTCSEE----------ECCSCTTCHHHHHHHHHHC-----SSEEEBCTTCCSHHHHHHHHHHTCCEECC
T ss_pred HHHHHHHHHHhhCCCEE----------ECCCCcccHHHHHHHHhhC-----CCCEEecCCcCCHHHHHHHHHcCCCEEEe
Confidence 65555432 4444 2556555566666666653 47999999988 77888888888998866
Q ss_pred c
Q 023494 254 G 254 (281)
Q Consensus 254 G 254 (281)
-
T Consensus 271 k 271 (393)
T 4dwd_A 271 D 271 (393)
T ss_dssp C
T ss_pred C
Confidence 4
No 417
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=85.56 E-value=2.2 Score=39.79 Aligned_cols=122 Identities=13% Similarity=0.057 Sum_probs=70.2
Q ss_pred CHHHHHHHHHHcCCCeEEEEeeeCccc-----cc---------------ccCCHHHHHHcCcCCC-CCeeEEEEecC---
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMDGRFV-----PN---------------ITIGPLVVDALRPVTD-LPLDVHLMIVE--- 126 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImDG~fv-----pn---------------~~~G~~~I~~ir~~t~-~~idaHLmv~d--- 126 (281)
.+.++.+.+.++|.|.|+|..-.|-.+ |+ ..|-.++++++|+..+ .++-+.|-..+
T Consensus 167 ~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~ 246 (377)
T 2r14_A 167 DYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELF 246 (377)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCT
T ss_pred HHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccC
Confidence 444555667789999998875443111 21 1234677888888643 27777653321
Q ss_pred ----------hhhHHHHHHHcCCCEEEEccccc---ccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhcc--CCEE
Q 023494 127 ----------PEQRVPDFIKAGADIVSVHCEQS---STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV--VDLV 191 (281)
Q Consensus 127 ----------p~~~i~~~~~aGAd~Itvh~Ea~---~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~--vD~I 191 (281)
..++++.+.++|+|++++|.-.. ......+.++.+|+.=-...++. -.-..+..++++.. +|.|
T Consensus 247 ~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~iPvi~~-Ggi~~~~a~~~l~~g~aD~V 325 (377)
T 2r14_A 247 GLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFKGGLIYC-GNYDAGRAQARLDDNTADAV 325 (377)
T ss_dssp TCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHCCSEEEEE-SSCCHHHHHHHHHTTSCSEE
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHCCCCEEEE-CCCCHHHHHHHHHCCCceEE
Confidence 12345667789999999996310 00001245566665422233333 33347777887764 8999
Q ss_pred EE
Q 023494 192 LI 193 (281)
Q Consensus 192 lv 193 (281)
.+
T Consensus 326 ~i 327 (377)
T 2r14_A 326 AF 327 (377)
T ss_dssp EE
T ss_pred ee
Confidence 76
No 418
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=85.44 E-value=2.5 Score=39.04 Aligned_cols=66 Identities=23% Similarity=0.305 Sum_probs=45.0
Q ss_pred HHHHHhhc---cCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEc
Q 023494 179 SAIECVLD---VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAG 254 (281)
Q Consensus 179 e~~~~~l~---~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvG 254 (281)
+.+..+++ .+|.+.+- ... | ..+..++.|+++|+..+ +.++.+-+..+.+.+..+.++|||.+++|
T Consensus 121 ~~~~~l~~~~~g~~~i~i~-~~~---g--~~~~~~~~i~~lr~~~~----~~~vi~g~v~t~e~A~~a~~aGaD~I~v~ 189 (351)
T 2c6q_A 121 EQLEQILEAIPQVKYICLD-VAN---G--YSEHFVEFVKDVRKRFP----QHTIMAGNVVTGEMVEELILSGADIIKVG 189 (351)
T ss_dssp HHHHHHHHHCTTCCEEEEE-CSC---T--TBHHHHHHHHHHHHHCT----TSEEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHhccCCCCEEEEE-ecC---C--CcHHHHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHHHhCCCEEEEC
Confidence 34444444 47766542 222 2 23456788888887653 36777777788999999999999999885
No 419
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=85.39 E-value=6.9 Score=36.04 Aligned_cols=118 Identities=11% Similarity=0.051 Sum_probs=74.3
Q ss_pred ChhhHHH---HHHHc-CCCEEEEcccccccccHHHHHHHHHHc---CCcEEEEECCCCCHHHHHHhhccCCEEEEEeecC
Q 023494 126 EPEQRVP---DFIKA-GADIVSVHCEQSSTIHLHRTLNQIKDL---GAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNP 198 (281)
Q Consensus 126 dp~~~i~---~~~~a-GAd~Itvh~Ea~~~~~i~~~l~~ik~~---G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~p 198 (281)
+|+..++ .+.+. |...+=+..-....+.-.+.++++|+. +..+.+..|.....+....+++.++-.-+.-+
T Consensus 151 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i-- 228 (372)
T 3tj4_A 151 TLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRERVDSAVRIAIDGNGKWDLPTCQRFCAAAKDLDIYWF-- 228 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEECCCSSHHHHHHHHHHHHHHSCTTCEEEEECTTCCCHHHHHHHHHHTTTSCEEEE--
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCCCCHHHHHHHHHHHHHHcCCCCcEEeeCCCCCCHHHHHHHHHHHhhcCCCEE--
Confidence 6766654 45567 999998886421122234567777763 56777888888888766665543221111111
Q ss_pred CCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEE
Q 023494 199 GFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVA 253 (281)
Q Consensus 199 G~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~Vv 253 (281)
.|++.+..++-++++++.. +++|..|+.+. .+.+..+++.| +|++.+
T Consensus 229 ---EqP~~~~d~~~~~~l~~~~-----~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~ 277 (372)
T 3tj4_A 229 ---EEPLWYDDVTSHARLARNT-----SIPIALGEQLYTVDAFRSFIDAGAVAYVQP 277 (372)
T ss_dssp ---ESCSCTTCHHHHHHHHHHC-----SSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred ---ECCCCchhHHHHHHHHhhc-----CCCEEeCCCccCHHHHHHHHHcCCCCEEEe
Confidence 2556555566666666543 47999999988 67888888776 677654
No 420
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=85.34 E-value=2.2 Score=40.26 Aligned_cols=114 Identities=11% Similarity=0.150 Sum_probs=74.6
Q ss_pred cCh-hhHHH---HHHHcCCCEEEEcccccccccHHHHHHHHHHc---CCcEEEEECCCCCHHHHHHhhcc-----CCEEE
Q 023494 125 VEP-EQRVP---DFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL---GAKAGVVLNPATSLSAIECVLDV-----VDLVL 192 (281)
Q Consensus 125 ~dp-~~~i~---~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~---G~k~Glai~p~t~ie~~~~~l~~-----vD~Il 192 (281)
.+| +.+.+ .+.+.|.+.+=+|.-. +.....+.++++|+. ++.+.+..|.....+....+++. +++|
T Consensus 183 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~-~~~~d~e~v~avR~avG~d~~l~vDan~~~~~~eai~~~~~L~~~~i~~i- 260 (428)
T 3bjs_A 183 YQPKESLAEEAQEYIARGYKALKLRIGD-AARVDIERVRHVRKVLGDEVDILTDANTAYTMADARRVLPVLAEIQAGWL- 260 (428)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCS-CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTTCSCE-
T ss_pred CChHHHHHHHHHHHHHCCCCEEEECCCC-CHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEE-
Confidence 577 76654 3467899999998653 223345677788874 46677788877777665555432 4443
Q ss_pred EEeecCCCCCCccchhHHHHHHHHHHHhhhcCCC-CeEEEecCCC-hhcHHHHHHcC-CcEEEEc
Q 023494 193 IMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVN-PWIEVDGGVG-PKNAYKVIEAG-ANALVAG 254 (281)
Q Consensus 193 vmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~-~~I~VDGGI~-~e~i~~~~~aG-AD~~VvG 254 (281)
.|++.+..++-.+++++. .+ ++|..|+.+. ++.+..+++.| +|++.+-
T Consensus 261 ---------EqP~~~~d~~~~~~l~~~-----~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 311 (428)
T 3bjs_A 261 ---------EEPFACNDFASYREVAKI-----TPLVPIAAGENHYTRFEFGQMLDAGAVQVWQPD 311 (428)
T ss_dssp ---------ECCSCTTCHHHHHHHTTT-----CSSSCEEECTTCCSHHHHHHHHTTCCEEEECCB
T ss_pred ---------ECCCCccCHHHHHHHHHh-----CCCCcEEcCCCcCCHHHHHHHHHhCCCCEEEeC
Confidence 255555555555555432 34 7899999986 78888888777 5666543
No 421
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=85.26 E-value=3.1 Score=36.12 Aligned_cols=86 Identities=10% Similarity=0.040 Sum_probs=59.2
Q ss_pred ccCCHHHHHHcCcC-CCCCeeEEEEecChhhHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCH
Q 023494 100 ITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSL 178 (281)
Q Consensus 100 ~~~G~~~I~~ir~~-t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~i 178 (281)
.+|.++.++.+|+. ++.++-. |.-..|..+.+.+...|++.++.+.... -.+.++.+++.|+++.+.. .+ ..
T Consensus 149 ~SF~~~~l~~~~~~~p~~~~~~-l~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~v~~~~~~G~~v~~WT-vn-~~ 221 (252)
T 3qvq_A 149 SSFNYFALVSAKALWPEIARGY-NVSAIPSAWQERLEHLDCAGLHIHQSFF----DVQQVSDIKAAGYKVLAFT-IN-DE 221 (252)
T ss_dssp EESCHHHHHHHHHHCTTSCEEE-ECSSCCTTHHHHHHHHTCSEEEEEGGGC----CHHHHHHHHHTTCEEEEEC-CC-CH
T ss_pred EeCCHHHHHHHHHHCCCCcEEE-EEecCchhHHHHHHHcCCeEEecchhhC----CHHHHHHHHHCCCEEEEEc-CC-CH
Confidence 37899999999876 5555432 3323345566667788999999887642 2468899999999998863 23 44
Q ss_pred HHHHHhhc-cCCEEE
Q 023494 179 SAIECVLD-VVDLVL 192 (281)
Q Consensus 179 e~~~~~l~-~vD~Il 192 (281)
+.++.++. .+|.|.
T Consensus 222 ~~~~~l~~~GVdgIi 236 (252)
T 3qvq_A 222 SLALKLYNQGLDAVF 236 (252)
T ss_dssp HHHHHHHHTTCCEEE
T ss_pred HHHHHHHHcCCCEEE
Confidence 55666665 588774
No 422
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=85.23 E-value=2.3 Score=38.97 Aligned_cols=111 Identities=17% Similarity=0.167 Sum_probs=71.4
Q ss_pred cChhhHHH---HHHHcCCCEEEEcccccccccHHHHHHHHHHc---CCcEEEEECCCCCHHHHHHhhcc-----CCEEEE
Q 023494 125 VEPEQRVP---DFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL---GAKAGVVLNPATSLSAIECVLDV-----VDLVLI 193 (281)
Q Consensus 125 ~dp~~~i~---~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~---G~k~Glai~p~t~ie~~~~~l~~-----vD~Ilv 193 (281)
.+|+.+.+ .+.+.|.+.+-+|.. +..+ .+.++++|+. ++.+.+..|.....+. .++++. +++|
T Consensus 140 ~~~~~~~~~a~~~~~~Gf~~vKik~~--~~~~-~e~v~avr~~~g~~~~l~vDan~~~~~~~-~~~~~~l~~~~i~~i-- 213 (368)
T 1sjd_A 140 DTIPQLLDVVGGYLDEGYVRIKLKIE--PGWD-VEPVRAVRERFGDDVLLQVDANTAYTLGD-APQLARLDPFGLLLI-- 213 (368)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEECB--TTBS-HHHHHHHHHHHCTTSEEEEECTTCCCGGG-HHHHHTTGGGCCSEE--
T ss_pred CCHHHHHHHHHHHHHhCccEEEEecC--chhH-HHHHHHHHHhcCCCceEEEeccCCCCHHH-HHHHHHHHhcCCCeE--
Confidence 36766654 356789999999974 2222 3566777753 4667777777666655 555443 3433
Q ss_pred EeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEEc
Q 023494 194 MSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVAG 254 (281)
Q Consensus 194 msV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~VvG 254 (281)
.|++.+..++..+++++. .+++|..|+.++ ++.+..+++.| +|++.+=
T Consensus 214 --------E~P~~~~~~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik 263 (368)
T 1sjd_A 214 --------EQPLEEEDVLGHAELARR-----IQTPICLDESIVSARAAADAIKLGAVQIVNIK 263 (368)
T ss_dssp --------ECCSCTTCHHHHHHHHTT-----CSSCEEESTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred --------eCCCChhhHHHHHHHHHh-----CCCCEEECCCcCCHHHHHHHHHcCCCCEEEec
Confidence 255555555555555543 357899999986 77888888776 6888763
No 423
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=85.21 E-value=1.9 Score=40.03 Aligned_cols=114 Identities=21% Similarity=0.179 Sum_probs=67.3
Q ss_pred HHHHHHHHcCCCeEEEEeeeCccc-----c--cc---c----------CCHHHHHHcCcCCC-CCeeEEEEecC------
Q 023494 74 EQVKAVELAGCDWIHVDVMDGRFV-----P--NI---T----------IGPLVVDALRPVTD-LPLDVHLMIVE------ 126 (281)
Q Consensus 74 ~~l~~l~~~G~d~iHiDImDG~fv-----p--n~---~----------~G~~~I~~ir~~t~-~~idaHLmv~d------ 126 (281)
++.+.+.++|.|.|+|-.--|-.+ | |. . |-.++++++|+..+ .++-+.|=..+
T Consensus 165 ~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~~ 244 (361)
T 3gka_A 165 RGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTMG 244 (361)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCC
T ss_pred HHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCCCC
Confidence 444567789999988865433111 2 11 2 33788999988643 26766554332
Q ss_pred ---h----hhHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHc-CCcEEEEECCCCCHHHHHHhhcc--CCEEEE
Q 023494 127 ---P----EQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL-GAKAGVVLNPATSLSAIECVLDV--VDLVLI 193 (281)
Q Consensus 127 ---p----~~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~-G~k~Glai~p~t~ie~~~~~l~~--vD~Ilv 193 (281)
+ ..+++.+.++|+|++++|.-.. .. ..++.+|+. ++.+ ++.. ....+..++++.. +|.|.+
T Consensus 245 ~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~-~~---~~~~~ik~~~~iPv-i~~G-git~e~a~~~l~~G~aD~V~i 315 (361)
T 3gka_A 245 DSDPAATFGHVARELGRRRIAFLFARESFG-GD---AIGQQLKAAFGGPF-IVNE-NFTLDSAQAALDAGQADAVAW 315 (361)
T ss_dssp CSCHHHHHHHHHHHHHHTTCSEEEEECCCS-TT---CCHHHHHHHHCSCE-EEES-SCCHHHHHHHHHTTSCSEEEE
T ss_pred CCCcHHHHHHHHHHHHHcCCCEEEECCCCC-CH---HHHHHHHHHcCCCE-EEeC-CCCHHHHHHHHHcCCccEEEE
Confidence 1 1245667789999999996431 11 234555543 4332 2322 3356777777764 899976
No 424
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=85.15 E-value=20 Score=31.87 Aligned_cols=172 Identities=19% Similarity=0.247 Sum_probs=100.0
Q ss_pred CccCHHHHHHHHHHcCCCeEEEEeeeCcccccc------cCCHHHHHHcCcC---CCCCeeEEEEecChhhHHHHHHHcC
Q 023494 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNI------TIGPLVVDALRPV---TDLPLDVHLMIVEPEQRVPDFIKAG 138 (281)
Q Consensus 68 D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~------~~G~~~I~~ir~~---t~~~idaHLmv~dp~~~i~~~~~aG 138 (281)
|.....+.++.+.++|++.+-+ +.|-|.. .+|.+..+.+++. .++++... +.||. -++.+.+.
T Consensus 50 ~~e~a~~~a~~~k~~ga~~~k~----~~~kprts~~~f~g~g~~gl~~l~~~~~~~Gl~~~te--~~d~~-~~~~l~~~- 121 (276)
T 1vs1_A 50 SWEQVREAALAVKEAGAHMLRG----GAFKPRTSPYSFQGLGLEGLKLLRRAGDEAGLPVVTE--VLDPR-HVETVSRY- 121 (276)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEC----BSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCCEEEE--CCCGG-GHHHHHHH-
T ss_pred CHHHHHHHHHHHHHhCCCEEEe----EEEeCCCChhhhcCCCHHHHHHHHHHHHHcCCcEEEe--cCCHH-HHHHHHHh-
Confidence 4445556667777999987544 3444432 2255556655543 56777663 34544 34555666
Q ss_pred CCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhc------cCCEEEEE-ee--cCCCCCCccchhH
Q 023494 139 ADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD------VVDLVLIM-SV--NPGFGGQSFIESQ 209 (281)
Q Consensus 139 Ad~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~------~vD~Ilvm-sV--~pG~~GQ~f~~~~ 209 (281)
+|++-+.... ..+ ..+++++-+.|+-+++.....-.++++..-++ .-+++++. ++ .|++.-.. -.
T Consensus 122 vd~~kIgs~~--~~n-~~ll~~~a~~~kPV~lk~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~---vd 195 (276)
T 1vs1_A 122 ADMLQIGARN--MQN-FPLLREVGRSGKPVLLKRGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFT---LD 195 (276)
T ss_dssp CSEEEECGGG--TTC-HHHHHHHHHHTCCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSB---CB
T ss_pred CCeEEECccc--ccC-HHHHHHHHccCCeEEEcCCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcch---hC
Confidence 8999999774 233 35677777889999998877633433333222 13666665 33 34432222 22
Q ss_pred HHHHHHHHHHhhhcCCCCeEEEec----CCC---hhcHHHHHHcCCcEEEEccccc
Q 023494 210 VKKISDLRRMCLEKGVNPWIEVDG----GVG---PKNAYKVIEAGANALVAGSAVF 258 (281)
Q Consensus 210 l~kI~~lr~l~~~~~~~~~I~VDG----GI~---~e~i~~~~~aGAD~~VvGSaIf 258 (281)
+.-|..+++.. +++|.+|- |.. ..-....+.+|||++++=+-+.
T Consensus 196 l~~i~~lk~~~-----~lpVi~dssH~~g~~~~~~~~~~aAva~Ga~Gl~IE~H~~ 246 (276)
T 1vs1_A 196 VAAVAVLKEAT-----HLPVIVDPSHPAGRRSLVPALAKAGLAAGADGLIVEVHPN 246 (276)
T ss_dssp HHHHHHHHHHB-----SSCEEECCHHHHCSGGGHHHHHHHHHHTTCSEEEEEBCSS
T ss_pred HHHHHHHHHHh-----CCCEEEeCCCCCCccchHHHHHHHHHHcCCCEEEEEecCC
Confidence 44455555542 35665552 332 2334455789999999988763
No 425
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=85.13 E-value=13 Score=35.26 Aligned_cols=117 Identities=14% Similarity=0.200 Sum_probs=76.7
Q ss_pred hhHHHHHHHcCCCEEEEccccc---ccccHHHHHHHHHH-------c-CCcEEEEECCCCC-HHHHHHhhc-cCCEEEEE
Q 023494 128 EQRVPDFIKAGADIVSVHCEQS---STIHLHRTLNQIKD-------L-GAKAGVVLNPATS-LSAIECVLD-VVDLVLIM 194 (281)
Q Consensus 128 ~~~i~~~~~aGAd~Itvh~Ea~---~~~~i~~~l~~ik~-------~-G~k~Glai~p~t~-ie~~~~~l~-~vD~Ilvm 194 (281)
.+.++.+.+.+...+.|-.+.. ...+...+++.+.+ . ...+|..+.+... .+++..+.+ .+|.|.+-
T Consensus 173 ~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~~~~~~d~~~~~~vg~~i~~~~~~~~~a~~l~~~G~d~ivi~ 252 (491)
T 1zfj_A 173 ETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEFPHAAKDEFGRLLVAAAVGVTSDTFERAEALFEAGADAIVID 252 (491)
T ss_dssp HHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhccccccCcCCcEEEEEeccCchhHHHHHHHHHHcCCCeEEEe
Confidence 3457778889988888765431 13456777777763 2 3567777765433 355555544 48988764
Q ss_pred eecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCC-ChhcHHHHHHcCCcEEEEcc
Q 023494 195 SVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGV-GPKNAYKVIEAGANALVAGS 255 (281)
Q Consensus 195 sV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI-~~e~i~~~~~aGAD~~VvGS 255 (281)
+. .| ..+..++.++++++.++ +.++. .||+ +.+.+..+.++|||.+.+|.
T Consensus 253 ~a----~g--~~~~~~~~i~~l~~~~p----~~pvi-~G~v~t~~~a~~~~~~Gad~I~vg~ 303 (491)
T 1zfj_A 253 TA----HG--HSAGVLRKIAEIRAHFP----NRTLI-AGNIATAEGARALYDAGVDVVKVGI 303 (491)
T ss_dssp CS----CT--TCHHHHHHHHHHHHHCS----SSCEE-EEEECSHHHHHHHHHTTCSEEEECS
T ss_pred ee----cC--cchhHHHHHHHHHHHCC----CCcEe-CCCccCHHHHHHHHHcCCCEEEECc
Confidence 32 22 22456777888887753 35665 5555 48888999999999999983
No 426
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=85.10 E-value=5 Score=37.07 Aligned_cols=122 Identities=14% Similarity=0.129 Sum_probs=71.2
Q ss_pred CHHHHHHHHHHcCCCeEEEEeeeCc----cc-cc---------------ccCCHHHHHHcCcCCC-CCeeEEEEecC---
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMDGR----FV-PN---------------ITIGPLVVDALRPVTD-LPLDVHLMIVE--- 126 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImDG~----fv-pn---------------~~~G~~~I~~ir~~t~-~~idaHLmv~d--- 126 (281)
++.++.+.+.++|.|.|||..-.|- |. |+ ..|-.++++++|+..+ .++-+-|=..+
T Consensus 162 ~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~ 241 (364)
T 1vyr_A 162 DFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQ 241 (364)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBT
T ss_pred HHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEccccccc
Confidence 4445556678899999988754431 11 32 1234567888888643 26666444332
Q ss_pred --------h---hhHHHHHHHcCCCEEEEccccc--ccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhcc--CCEE
Q 023494 127 --------P---EQRVPDFIKAGADIVSVHCEQS--STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV--VDLV 191 (281)
Q Consensus 127 --------p---~~~i~~~~~aGAd~Itvh~Ea~--~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~--vD~I 191 (281)
+ .++.+.+.++|+|++++|.-.. ......+.++.+|+.=-..-++. -.-..+..++++.. +|.|
T Consensus 242 ~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~~iPvi~~-Ggit~~~a~~~l~~g~aD~V 320 (364)
T 1vyr_A 242 NVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERFHGVIIGA-GAYTAEKAEDLIGKGLIDAV 320 (364)
T ss_dssp TBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEEE-SSCCHHHHHHHHHTTSCSEE
T ss_pred cccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHHCCCCEEEE-CCcCHHHHHHHHHCCCccEE
Confidence 1 1235667789999999996310 00112356677776522233333 23356777777764 8999
Q ss_pred EE
Q 023494 192 LI 193 (281)
Q Consensus 192 lv 193 (281)
.+
T Consensus 321 ~~ 322 (364)
T 1vyr_A 321 AF 322 (364)
T ss_dssp EE
T ss_pred EE
Confidence 76
No 427
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=85.04 E-value=10 Score=39.69 Aligned_cols=83 Identities=20% Similarity=0.212 Sum_probs=58.9
Q ss_pred ceEeEEEecc-CccCHHHHHHHHHHcCCCeEEEEeeeCcccccc--------------cCCHHHHHHcCcCCCCCeeEEE
Q 023494 58 IIVSPSILSA-NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNI--------------TIGPLVVDALRPVTDLPLDVHL 122 (281)
Q Consensus 58 ~~i~pSila~-D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~--------------~~G~~~I~~ir~~t~~~idaHL 122 (281)
..+..++++. |..++.+.++.+++.|+|.|++.+- .|+. .+-.+.++++|+.+++|+.+-+
T Consensus 635 ~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~----~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~ 710 (1025)
T 1gte_A 635 NIVIASIMCSYNKNDWMELSRKAEASGADALELNLS----CPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKL 710 (1025)
T ss_dssp SEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC----CBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECC----CCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEe
Confidence 3566777654 7778888899998999999988642 1332 1123477888887788988865
Q ss_pred Eec--ChhhHHHHHHHcCCCEEEE
Q 023494 123 MIV--EPEQRVPDFIKAGADIVSV 144 (281)
Q Consensus 123 mv~--dp~~~i~~~~~aGAd~Itv 144 (281)
.-. |...+.+.+.++|+|+|++
T Consensus 711 ~~~~~~~~~~a~~~~~~G~d~i~v 734 (1025)
T 1gte_A 711 TPNVTDIVSIARAAKEGGADGVTA 734 (1025)
T ss_dssp CSCSSCHHHHHHHHHHHTCSEEEE
T ss_pred CCChHHHHHHHHHHHHcCCCEEEE
Confidence 432 3345677788999999999
No 428
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=84.95 E-value=1.9 Score=38.39 Aligned_cols=181 Identities=12% Similarity=-0.028 Sum_probs=99.3
Q ss_pred eEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCccc--ccccCCH-HHHHHcCc----CCCCCeeEEEEecCh--hhH-
Q 023494 61 SPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFV--PNITIGP-LVVDALRP----VTDLPLDVHLMIVEP--EQR- 130 (281)
Q Consensus 61 ~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fv--pn~~~G~-~~I~~ir~----~t~~~idaHLmv~dp--~~~- 130 (281)
..|.|.+...+- +.++.+...|+|++-+|.-|+... .+..... .+...++. ..+....+ -++.. ..+
T Consensus 8 ~rs~L~~p~~~~-~~~~~a~~~gaD~vilDlEdav~~~~~~k~~Ar~~v~~~l~~~~~~~~~~~~~V--Rv~~~~~~~~~ 84 (284)
T 1sgj_A 8 LRSVLFAPGNRA-DLIAKLPRSAPDAVVIDLEDAVPGTAEAKAAARPVAHDAARDLIAAAPHLAVFV--RVNALHSPYFE 84 (284)
T ss_dssp CSEEEEEETTCH-HHHHHTTTTCCSEEEEESSTTSCSSHHHHHHHHHHHHHHHHHHHHHSTTSEEEE--ECCCTTSTTHH
T ss_pred CceEEEccCCCH-HHHHHHHhCCCCEEEEECCCCCCCchhhHHHHHHHHHHHHHhcccccCCCeEEE--EeCCCCCHhHH
Confidence 345555554443 456667778999999999998432 1111111 22222322 12222333 33332 222
Q ss_pred --HHHHHHcCCCEEEEcccccccccHHHHHHHHHHc--CCcEEEEECCCCCHHHHHHhhc--cCCEEEEEee----cCCC
Q 023494 131 --VPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL--GAKAGVVLNPATSLSAIECVLD--VVDLVLIMSV----NPGF 200 (281)
Q Consensus 131 --i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~--G~k~Glai~p~t~ie~~~~~l~--~vD~IlvmsV----~pG~ 200 (281)
+..+.+ |+++|.++--. +.+++..+.+.++.. .++++..|....-+..+.+++. .+|.+.+.+. .-|.
T Consensus 85 ~dl~~~l~-g~~~i~lPkv~-s~~~v~~~~~~l~~~g~~~~i~~~IEt~~av~~~~eIa~~~~vd~l~iG~~DL~~~lg~ 162 (284)
T 1sgj_A 85 DDLSVLTP-ELSGVVVPKLE-MGAEARQVAQMLQERSLPLPILAGLETGAGVWNAREIMEVPEVAWAYFGAEDYTTDLGG 162 (284)
T ss_dssp HHGGGCCT-TSSEEEECSCC-SHHHHHHHHHHHHHTTCCCCEEEEECSHHHHHTHHHHHTSTTEEEEEECHHHHHHHHTC
T ss_pred HHHHHHhc-cCCEEEeCCCC-CHHHHHHHHHHHHhcCCCeEEEEEecCHHHHHHHHHHHcCCCCcEEEECHHHHHHHhCC
Confidence 333456 99999998554 356677777777765 4677777744444466777664 4677766432 2244
Q ss_pred CCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-h-------hcHHHHHHcCCc
Q 023494 201 GGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-P-------KNAYKVIEAGAN 249 (281)
Q Consensus 201 ~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~-------e~i~~~~~aGAD 249 (281)
.+++..+..+.-++++.......| .+. +||=.. . +.....++.|.+
T Consensus 163 ~~~~~~~~~~~a~~~iv~aa~a~G--~~~-i~~v~~~~~d~~~l~~~~~~~~~~Gf~ 216 (284)
T 1sgj_A 163 KRTPGGLEVLYARSQVALAARLTG--VAA-LDIVVTALNDPETFRADAEQGRALGYS 216 (284)
T ss_dssp CCCSSCGGGHHHHHHHHHHHHHHT--CEE-EECCCCCCSCHHHHHHHHHHHHHTTCS
T ss_pred CCCCChHHHHHHHHHHHHHHHHcC--CCe-eeCCcCCCCCHHHHHHHHHHHHhCCCC
Confidence 444444555555555555554443 333 444221 2 456778999996
No 429
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=84.88 E-value=2.2 Score=39.72 Aligned_cols=115 Identities=10% Similarity=0.072 Sum_probs=72.6
Q ss_pred ChhhHHHH---HHHcCCCEEEEccc-----cc-------------ccccHHHHHHHHHH-c--CCcEEEEECCCCCHHHH
Q 023494 126 EPEQRVPD---FIKAGADIVSVHCE-----QS-------------STIHLHRTLNQIKD-L--GAKAGVVLNPATSLSAI 181 (281)
Q Consensus 126 dp~~~i~~---~~~aGAd~Itvh~E-----a~-------------~~~~i~~~l~~ik~-~--G~k~Glai~p~t~ie~~ 181 (281)
+|+.+.+. +.+.|.+.+=+|.. .. ......+.++++|+ . ++.+.+..|.....+..
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~avG~d~~l~vDan~~~~~~~a 225 (403)
T 2ox4_A 146 RKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNAVGPDVDIIVENHGHTDLVSA 225 (403)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHH
Confidence 67766544 46789999999852 10 01224467777777 3 46677788877777665
Q ss_pred HHhhcc---CCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEE
Q 023494 182 ECVLDV---VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVA 253 (281)
Q Consensus 182 ~~~l~~---vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~Vv 253 (281)
.++++. .+...+ + |++.+..++-.+++++. .+++|..|+.+. ++.+.++++.| +|++.+
T Consensus 226 i~~~~~l~~~~i~~i---E-----~P~~~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 289 (403)
T 2ox4_A 226 IQFAKAIEEFNIFFY---E-----EINTPLNPRLLKEAKKK-----IDIPLASGERIYSRWGFLPFLEDRSIDVIQP 289 (403)
T ss_dssp HHHHHHHGGGCEEEE---E-----CCSCTTSTHHHHHHHHT-----CCSCEEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHHhhCCCEE---e-----CCCChhhHHHHHHHHHh-----CCCCEEecCCcCCHHHHHHHHHcCCCCEEec
Confidence 555443 232222 2 44545555555666543 257899999997 78888888876 677754
No 430
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=84.83 E-value=5.8 Score=36.81 Aligned_cols=126 Identities=17% Similarity=0.178 Sum_probs=81.0
Q ss_pred CCeeEEEEecChhhHHHH---HHHcCCCEEEEcccccccccHHHHHHHHHHc---CCcEEEEECCCCCHHHHHHhhccC-
Q 023494 116 LPLDVHLMIVEPEQRVPD---FIKAGADIVSVHCEQSSTIHLHRTLNQIKDL---GAKAGVVLNPATSLSAIECVLDVV- 188 (281)
Q Consensus 116 ~~idaHLmv~dp~~~i~~---~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~---G~k~Glai~p~t~ie~~~~~l~~v- 188 (281)
++..+.+-..+|+..++. +.+.|...+=+..-. +.+.-.+.++++|+. ++.+.+..|.....+....+++..
T Consensus 132 v~~y~t~g~~~~e~~~~~a~~~~~~Gf~~~KlK~g~-~~~~d~~~v~avR~a~g~~~~L~vDaN~~w~~~~A~~~~~~l~ 210 (379)
T 3r0u_A 132 IVTDVSISCGNVAETIQNIQNGVEANFTAIKVKTGA-DFNRDIQLLKALDNEFSKNIKFRFDANQGWNLAQTKQFIEEIN 210 (379)
T ss_dssp EEBCEEECCCCHHHHHHHHHHHHHTTCCEEEEECSS-CHHHHHHHHHHHHHHCCTTSEEEEECTTCCCHHHHHHHHHHHH
T ss_pred EEEEEEecCCCHHHHHHHHHHHHHcCCCEEeeecCC-CHHHHHHHHHHHHHhcCCCCeEEEeCCCCcCHHHHHHHHHHHh
Confidence 455566666788766544 456799998887643 122334567777774 467888888888887666654432
Q ss_pred C--E-EEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEEc
Q 023494 189 D--L-VLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVAG 254 (281)
Q Consensus 189 D--~-IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~VvG 254 (281)
+ + +.. + .|++.+..++-++++++.. .++|+.|..+. .+.+..+++.| +|++.+-
T Consensus 211 ~~~~~l~~--i-----EeP~~~~d~~~~~~l~~~~-----~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k 269 (379)
T 3r0u_A 211 KYSLNVEI--I-----EQPVKYYDIKAMAEITKFS-----NIPVVADESVFDAKDAERVIDEQACNMINIK 269 (379)
T ss_dssp TSCCCEEE--E-----ECCSCTTCHHHHHHHHHHC-----SSCEEESTTCSSHHHHHHHHHTTCCSEEEEC
T ss_pred hcCCCcEE--E-----ECCCCcccHHHHHHHHhcC-----CCCEEeCCccCCHHHHHHHHHcCCCCEEEEC
Confidence 2 1 221 1 2555555566666666543 47899998887 67788888876 6887764
No 431
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=84.65 E-value=13 Score=31.33 Aligned_cols=95 Identities=12% Similarity=0.075 Sum_probs=53.1
Q ss_pred hhhHHHHHHHcCCCEEEEccccc-----ccccHHHHHHHHHHcCCcE-EEEE--CCCCC----HHHHHHhhcc-----CC
Q 023494 127 PEQRVPDFIKAGADIVSVHCEQS-----STIHLHRTLNQIKDLGAKA-GVVL--NPATS----LSAIECVLDV-----VD 189 (281)
Q Consensus 127 p~~~i~~~~~aGAd~Itvh~Ea~-----~~~~i~~~l~~ik~~G~k~-Glai--~p~t~----ie~~~~~l~~-----vD 189 (281)
+...++.+.++|.+.|-+..... ...++.++.+.++++|+++ ++.. ..+.+ .+.++..++. ++
T Consensus 21 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~ 100 (272)
T 2q02_A 21 IEAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVGAR 100 (272)
T ss_dssp HHHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEEechhhhccCCcHHHHHHHHHHHHHHHHHhCCC
Confidence 44567777888888888764311 1245777788888888887 4432 11111 1223333332 45
Q ss_pred EEEEEeecCCCCCCccchhH-HHHHHHHHHHhhhcC
Q 023494 190 LVLIMSVNPGFGGQSFIESQ-VKKISDLRRMCLEKG 224 (281)
Q Consensus 190 ~IlvmsV~pG~~GQ~f~~~~-l~kI~~lr~l~~~~~ 224 (281)
+|.+ +||..+..-.... .+.++++.+...+.|
T Consensus 101 ~v~~---~~g~~~~~~~~~~~~~~l~~l~~~a~~~g 133 (272)
T 2q02_A 101 ALVL---CPLNDGTIVPPEVTVEAIKRLSDLFARYD 133 (272)
T ss_dssp EEEE---CCCCSSBCCCHHHHHHHHHHHHHHHHTTT
T ss_pred EEEE---ccCCCchhHHHHHHHHHHHHHHHHHHHcC
Confidence 6544 5665443223444 666777777665544
No 432
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=84.61 E-value=5.7 Score=37.94 Aligned_cols=119 Identities=20% Similarity=0.185 Sum_probs=69.9
Q ss_pred cCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCC-CCCeeEEEEecChhhHHHHHHHcCCCEEEEcccc
Q 023494 70 AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQ 148 (281)
Q Consensus 70 ~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t-~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea 148 (281)
....+.++.+.++|+|.+.++...|++ ..-.+.++++|+.+ ++|+.+- -+.+++ ..+.+.++|+|.|.+..+.
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~~G~~----~~~~e~i~~i~~~~p~~pvi~g-~~~t~e-~a~~l~~~G~d~I~v~~~~ 309 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTAHGHS----RRVIETLEMIKADYPDLPVVAG-NVATPE-GTEALIKAGADAVKVGVGP 309 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCCSS----HHHHHHHHHHHHHCTTSCEEEE-EECSHH-HHHHHHHTTCSEEEECSSC
T ss_pred HhHHHHHHHHHHhCCCEEEEEecCCch----HHHHHHHHHHHHHCCCceEEeC-CcCCHH-HHHHHHHcCCCEEEEcCCC
Confidence 455678888999999999887766643 12357788888864 6776552 234443 4577889999999994331
Q ss_pred c-----------ccccH---HHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCCEEEEE
Q 023494 149 S-----------STIHL---HRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIM 194 (281)
Q Consensus 149 ~-----------~~~~i---~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD~Ilvm 194 (281)
. ...+. .++.+..++.++.+..+=.-.++.+..+.+...+|.|.+.
T Consensus 310 G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kala~GAd~V~iG 369 (494)
T 1vrd_A 310 GSICTTRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALAAGAESVMVG 369 (494)
T ss_dssp STTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred CccccccccCCCCccHHHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 0 01122 2222223333555544322234444444444469998763
No 433
>3e49_A Uncharacterized protein DUF849 with A TIM barrel; structural genomics, joint center for structural genomics; HET: MSE; 1.75A {Burkholderia xenovorans LB400}
Probab=84.60 E-value=8.5 Score=35.03 Aligned_cols=194 Identities=15% Similarity=0.167 Sum_probs=108.0
Q ss_pred CHHHHHHHHHHcCCCeEEEEeee---CcccccccCCHHHHHHcCcCCCCCeeEEEEe-----cChhhHHHHHHHcCCCEE
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMD---GRFVPNITIGPLVVDALRPVTDLPLDVHLMI-----VEPEQRVPDFIKAGADIV 142 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImD---G~fvpn~~~G~~~I~~ir~~t~~~idaHLmv-----~dp~~~i~~~~~aGAd~I 142 (281)
.+.++...+.++|+..+|+-+-| |.=......--++++.||+.++ +.+.+-+ .+|+.-+..+.+...|..
T Consensus 33 Eia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~~d--~iI~~TTgg~~~~~~eerla~~~~~~Pe~a 110 (311)
T 3e49_A 33 EVAQASIGAAEAGAAVIHLHARDPRDGRPTQDPAAFAEFLPRIKSNTD--AVINLTTGGSPHMTVEERLRPATHYMPELA 110 (311)
T ss_dssp HHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTHHHHHHHHCC--CEEEECSCSCTTSCHHHHHHHHHHHCCSEE
T ss_pred HHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHhCC--cEEEECCCCCCCCCHHHHHHHHHhcCCCee
Confidence 45555667778999999998877 5322222334567888887664 3333333 234444444445578888
Q ss_pred EEccccc---------------------------------ccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhcc--
Q 023494 143 SVHCEQS---------------------------------STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV-- 187 (281)
Q Consensus 143 tvh~Ea~---------------------------------~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~-- 187 (281)
++-.-.. +...+.++++.++++|+++-+.+-....+..+..+++.
T Consensus 111 Sln~gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~~~v~~n~~~~i~~~~~~~~e~Gi~pE~e~fd~g~l~~~~~l~~~Gl 190 (311)
T 3e49_A 111 SLNMGSMNFGLYPMLERFKEFAHGWEREHLERSRDLVFKNTFADIEFILKTCGGNGTRFEFECYDTSHLYNLAHFVDRKL 190 (311)
T ss_dssp EEECSCEECCCGGGGGTCCCCSSHHHHHHHHGGGGCEECCCHHHHHHHHHHHHTTTCEEEEEECSHHHHHHHHHHHHTTC
T ss_pred eecCCCcccccccchhhccccccccchhhcccCCCceecCCHHHHHHHHHHHHHcCCeeEEEEECHHHHHHHHHHHHcCC
Confidence 7762210 12258889999999999999988644455556555543
Q ss_pred ----CCEEEEEeecCCCCCCccchhHHHHHHHH-HHHhhhcCCCCeEEEecCCChh---cHHHHHHcCCcEEEEc--ccc
Q 023494 188 ----VDLVLIMSVNPGFGGQSFIESQVKKISDL-RRMCLEKGVNPWIEVDGGVGPK---NAYKVIEAGANALVAG--SAV 257 (281)
Q Consensus 188 ----vD~IlvmsV~pG~~GQ~f~~~~l~kI~~l-r~l~~~~~~~~~I~VDGGI~~e---~i~~~~~aGAD~~VvG--SaI 257 (281)
..+-++|++. +|++-.++.+.-+.+. .++++. +....| -|+... -....+..|-+ +=+| =.+
T Consensus 191 ~~~p~~~~~vlGv~---~g~~~~~~~L~~~~~~~~~~~~~---~~~wsv-~~~Gr~~~p~~~~A~~~GGh-vRVGlEDnl 262 (311)
T 3e49_A 191 ATPPFFVQTVFGLL---GGIGPHPEDLAHMRRTADRLFGA---DYVWSI-LGAGRHQIPLASIGAAQGAN-VRVGLEDSL 262 (311)
T ss_dssp SCSSEEEEEEESCT---TSCCCCHHHHHHHHHHHHHHHGG---GEEEEE-EECGGGHHHHHHHHHTTTCE-EEECTTTCS
T ss_pred CCCCeEEEEEecCC---CCCCCCHHHHHHHHHHHHhhCCC---CCeEEE-EeeChhhHHHHHHHHHcCCC-eEEcCCcce
Confidence 2233445443 4666666666554322 244443 233232 233333 34455778887 4556 224
Q ss_pred cC-----CCCHHHHHHHHHHhc
Q 023494 258 FG-----AKDYAEAIKGIKTSK 274 (281)
Q Consensus 258 f~-----a~dp~~~~~~l~~~~ 274 (281)
+- +++-.+.++++.+.+
T Consensus 263 ~~~~G~lA~sNaelV~~~~~i~ 284 (311)
T 3e49_A 263 WIAPGELAETNAAQVRKIRQVI 284 (311)
T ss_dssp EEETTEECSCHHHHHHHHHHHH
T ss_pred ecCCCCCCCCHHHHHHHHHHHH
Confidence 42 234445555555543
No 434
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=84.53 E-value=8.6 Score=33.01 Aligned_cols=151 Identities=15% Similarity=0.162 Sum_probs=81.5
Q ss_pred CHHHHHHcCcCCCCCeeEEEEecChh-hHHHHHHHcCCCEEEEccccc------------------------ccccH-HH
Q 023494 103 GPLVVDALRPVTDLPLDVHLMIVEPE-QRVPDFIKAGADIVSVHCEQS------------------------STIHL-HR 156 (281)
Q Consensus 103 G~~~I~~ir~~t~~~idaHLmv~dp~-~~i~~~~~aGAd~Itvh~Ea~------------------------~~~~i-~~ 156 (281)
|.++++.+|+. +.|+.+ ++.... .....+.++||+....=.... +.... ..
T Consensus 63 G~~~~~~lr~~-~~pvi~--lt~~~~~~~~~~a~~~Ga~dyl~Kp~~~~~~~~~~~~~~~~~~~~~~ILivDD~~~~~~~ 139 (259)
T 3luf_A 63 SGEAVKVLLER-GLPVVI--LTADISEDKREAWLEAGVLDYVMKDSRHSLQYAVGLVHRLYLNQQIEVLVVDDSRTSRHR 139 (259)
T ss_dssp TSHHHHHHHHT-TCCEEE--EECC-CHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred HHHHHHHHHhC-CCCEEE--EEccCCHHHHHHHHHCCCcEEEeCCchhHHHHHHHhhhhHhhcCCCcEEEEeCCHHHHHH
Confidence 77888888874 466654 554332 345567899997655432100 00011 12
Q ss_pred HHHHHHHcCCcEEEEECCCCCHHHHHHhhcc--CCEEEEEeec-CCCCCCccchhHHHHHHHHHHHhhhcCCCCeE-EEe
Q 023494 157 TLNQIKDLGAKAGVVLNPATSLSAIECVLDV--VDLVLIMSVN-PGFGGQSFIESQVKKISDLRRMCLEKGVNPWI-EVD 232 (281)
Q Consensus 157 ~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~--vD~IlvmsV~-pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I-~VD 232 (281)
+...+++.|..+..+-+ ..+.++.+... +|.|+ +-++ ||..| ++-++++|+..+. .+++| .+.
T Consensus 140 l~~~L~~~~~~v~~a~~---~~eal~~l~~~~~~dlvl-lD~~mP~~dG-------~~l~~~lr~~~~~--~~~~ii~~s 206 (259)
T 3luf_A 140 TMAQLRKQLLQVHEASH---AREALATLEQHPAIRLVL-VDYYMPEIDG-------ISLVRMLRERYSK--QQLAIIGIS 206 (259)
T ss_dssp HHHHHHTTTCEEEEESS---HHHHHHHHHHCTTEEEEE-ECSCCSSSCH-------HHHHHHHHHHCCT--TTSEEEEEE
T ss_pred HHHHHHHcCcEEEEeCC---HHHHHHHHhcCCCCCEEE-EcCCCCCCCH-------HHHHHHHHhccCC--CCCeEEEEE
Confidence 22334455655544433 22333332222 45554 3332 55444 5556666654321 23454 456
Q ss_pred cCCChhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhc
Q 023494 233 GGVGPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSK 274 (281)
Q Consensus 233 GGI~~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~ 274 (281)
+.-+.+....+.++||+.++ .+.-++++-..++++.+
T Consensus 207 ~~~~~~~~~~a~~~Ga~~yl-----~KP~~~~~L~~~i~~~l 243 (259)
T 3luf_A 207 VSDKRGLSARYLKQGANDFL-----NQPFEPEELQCRVSHNL 243 (259)
T ss_dssp CSSSSSHHHHHHHTTCSEEE-----ESSCCHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHhcChhheE-----cCCCCHHHHHHHHHHHH
Confidence 66677788889999999764 45567776666666543
No 435
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=84.53 E-value=1 Score=38.36 Aligned_cols=82 Identities=18% Similarity=0.254 Sum_probs=66.5
Q ss_pred CCceEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHH
Q 023494 56 SDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFI 135 (281)
Q Consensus 56 ~~~~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~ 135 (281)
..+...+-++-.|-..++..++.+.+...|.+++ |-| . -|++++++++.++.|+.+==.+.+++ -++.+.
T Consensus 100 ~gL~tIqR~FliDS~al~~~~~~i~~~~PD~iEi--LPG-----i--~p~iI~~i~~~~~~PiIaGGlI~~~e-dv~~al 169 (192)
T 3kts_A 100 HKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIEL--LPG-----I--IPEQVQKMTQKLHIPVIAGGLIETSE-QVNQVI 169 (192)
T ss_dssp TTCEEEEEEECCSHHHHHHHHHHHHHHCCSEEEE--ECT-----T--CHHHHHHHHHHHCCCEEEESSCCSHH-HHHHHH
T ss_pred CCCeEEEEEEEEEcchHHHHHHHHhhcCCCEEEE--CCc-----h--hHHHHHHHHHhcCCCEEEECCcCCHH-HHHHHH
Confidence 3556777888889999999999999988998754 544 2 36899999998889999988888876 567788
Q ss_pred HcCCCEEEEccc
Q 023494 136 KAGADIVSVHCE 147 (281)
Q Consensus 136 ~aGAd~Itvh~E 147 (281)
++||+.|+..-.
T Consensus 170 ~aGA~aVsTs~~ 181 (192)
T 3kts_A 170 ASGAIAVTTSNK 181 (192)
T ss_dssp TTTEEEEEECCG
T ss_pred HcCCeEEEeCCH
Confidence 999999987643
No 436
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=84.52 E-value=2.8 Score=36.76 Aligned_cols=74 Identities=11% Similarity=0.184 Sum_probs=52.8
Q ss_pred EEEEecChhh-----HHHHHHHcCCCEEEEccccc-ccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCCEEEE
Q 023494 120 VHLMIVEPEQ-----RVPDFIKAGADIVSVHCEQS-STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLI 193 (281)
Q Consensus 120 aHLmv~dp~~-----~i~~~~~aGAd~Itvh~Ea~-~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD~Ilv 193 (281)
-|+..-||.+ .++.+.+.|+|.|.+..... ..++..++++.+|+..+-+.+. |..+ +.+.+.+|.+++
T Consensus 13 ~h~~~~DPdk~~~~~~l~~~~~~GtDaI~vGgs~gvt~~~~~~~v~~ik~~~~Piil~--p~~~----~~~~~gaD~il~ 86 (235)
T 3w01_A 13 RHIFKLDPAKHISDDDLDAICMSQTDAIMIGGTDDVTEDNVIHLMSKIRRYPLPLVLE--ISNI----ESVMPGFDFYFV 86 (235)
T ss_dssp CEEEEECTTSCCCHHHHHHHHTSSCSEEEECCSSCCCHHHHHHHHHHHTTSCSCEEEE--CCCS----TTCCTTCSEEEE
T ss_pred eEEEeECCCCcCCHHHHHHHHHcCCCEEEECCcCCcCHHHHHHHHHHhcCcCCCEEEe--cCCH----HHhhcCCCEEEE
Confidence 3677778864 35567889999999998752 2446788899998865555553 3433 335668999999
Q ss_pred EeecCC
Q 023494 194 MSVNPG 199 (281)
Q Consensus 194 msV~pG 199 (281)
+++-.+
T Consensus 87 pslln~ 92 (235)
T 3w01_A 87 PTVLNS 92 (235)
T ss_dssp EEETTB
T ss_pred ccccCC
Confidence 999665
No 437
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=84.49 E-value=19 Score=32.99 Aligned_cols=175 Identities=13% Similarity=0.101 Sum_probs=97.0
Q ss_pred ccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCH----HHHHHcCcC--CCCCeeEEEEecChhh---HHHHHHH
Q 023494 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGP----LVVDALRPV--TDLPLDVHLMIVEPEQ---RVPDFIK 136 (281)
Q Consensus 66 a~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~----~~I~~ir~~--t~~~idaHLmv~dp~~---~i~~~~~ 136 (281)
..|+..+++.++.+.+.|++-|-+ =|+.--..++.. ++++...+. -..|+.++.-.++..+ +.+.+.+
T Consensus 48 ~ID~~~l~~lv~~li~~Gv~Gl~v---~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~ 124 (343)
T 2v9d_A 48 QLDKPGTAALIDDLIKAGVDGLFF---LGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQ 124 (343)
T ss_dssp SBCHHHHHHHHHHHHHTTCSCEEE---SSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEe---CccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHh
Confidence 467777889999999999987633 233222223333 334444432 2478888877766654 4455678
Q ss_pred cCCCEEEEcccc---cccccHHHHHHHHHH-cCCcEEEEECCC-----CCHHHHHHhh-ccCCEEEEEeecCCCCCCccc
Q 023494 137 AGADIVSVHCEQ---SSTIHLHRTLNQIKD-LGAKAGVVLNPA-----TSLSAIECVL-DVVDLVLIMSVNPGFGGQSFI 206 (281)
Q Consensus 137 aGAd~Itvh~Ea---~~~~~i~~~l~~ik~-~G~k~Glai~p~-----t~ie~~~~~l-~~vD~IlvmsV~pG~~GQ~f~ 206 (281)
+|||.+.+..=. .+.+.+.+..+.+-+ .++.+.+=-+|. -+.+.+.++. +...++.+= +. .|
T Consensus 125 ~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~~~pnIvgiK--ds--sg---- 196 (343)
T 2v9d_A 125 AGADGIVVINPYYWKVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLADSRSNIIGIK--DT--ID---- 196 (343)
T ss_dssp HTCSEEEEECCSSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHHHCTTEEEEE--EC--CS----
T ss_pred cCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCchhcCcCCCHHHHHHHHHhCCCEEEEE--eC--CC----
Confidence 899988775221 112234444444433 356665544442 3556777776 444444331 11 11
Q ss_pred hhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEccc
Q 023494 207 ESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSA 256 (281)
Q Consensus 207 ~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSa 256 (281)
.+.++.++++..+..+.++.+ ..| - -+.+-.....|++.+|.|.+
T Consensus 197 --d~~~~~~l~~~~~~~~~~f~v-~~G-~-D~~~l~~l~~Ga~G~is~~a 241 (343)
T 2v9d_A 197 --SVAHLRSMIHTVKGAHPHFTV-LCG-Y-DDHLFNTLLLGGDGAISASG 241 (343)
T ss_dssp --CHHHHHHHHHHHHHHCTTCEE-EES-S-GGGHHHHHHTTCCEECCGGG
T ss_pred --CHHHHHHHHHhcCCCCCCEEE-EEC-c-HHHHHHHHHCCCCEEEeCHH
Confidence 244555555554311113444 333 2 33566678899999999965
No 438
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=84.43 E-value=3.9 Score=37.42 Aligned_cols=124 Identities=15% Similarity=0.189 Sum_probs=81.1
Q ss_pred CCeeEEEEecChhhHHHH---HHHcCCCEEEEcccccccccHHHHHHHHHHc---CCcEEEEECCCCCHHHHHHhhcc--
Q 023494 116 LPLDVHLMIVEPEQRVPD---FIKAGADIVSVHCEQSSTIHLHRTLNQIKDL---GAKAGVVLNPATSLSAIECVLDV-- 187 (281)
Q Consensus 116 ~~idaHLmv~dp~~~i~~---~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~---G~k~Glai~p~t~ie~~~~~l~~-- 187 (281)
++..+.+-..+|+.+.+. +.+.|...+=+..-. +.+.-.+.++++|+. ++.+.+..|.....+....+++.
T Consensus 130 v~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~K~G~-~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~ 208 (356)
T 3ro6_B 130 LPTSVTIGIKPVEETLAEAREHLALGFRVLKVKLCG-DEEQDFERLRRLHETLAGRAVVRVDPNQSYDRDGLLRLDRLVQ 208 (356)
T ss_dssp EEBCEEECSCCHHHHHHHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHHHHHHTTSSEEEEECTTCCCHHHHHHHHHHHH
T ss_pred eeeeEEEcCCCHHHHHHHHHHHHHcCCCEEEEEeCC-CHHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 455556666788876544 466799999887642 122233556666664 56777888888887765555432
Q ss_pred ---CCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC--CcEEEEcc
Q 023494 188 ---VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG--ANALVAGS 255 (281)
Q Consensus 188 ---vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG--AD~~VvGS 255 (281)
+++| .|++.+..++.++++++... ++|..|+.+. .+.+..+++.| +|++.+--
T Consensus 209 ~~~i~~i----------EqP~~~~d~~~~~~l~~~~~-----iPIa~dE~~~~~~~~~~~~~~~~~~d~v~~k~ 267 (356)
T 3ro6_B 209 ELGIEFI----------EQPFPAGRTDWLRALPKAIR-----RRIAADESLLGPADAFALAAPPAACGIFNIKL 267 (356)
T ss_dssp HTTCCCE----------ECCSCTTCHHHHHTSCHHHH-----HTEEESTTCCSHHHHHHHHSSSCSCSEEEECH
T ss_pred hcCCCEE----------ECCCCCCcHHHHHHHHhcCC-----CCEEeCCcCCCHHHHHHHHhcCCcCCEEEEcc
Confidence 3344 35666555666666665543 5899999987 67788888865 89888753
No 439
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=84.05 E-value=9.8 Score=35.94 Aligned_cols=112 Identities=21% Similarity=0.329 Sum_probs=67.6
Q ss_pred CCCeeEEEEecCh----h---hHHHHHHHcCCCEEEEcccccccccHHHHHHHHHH----cCCc--EEEEECCCCCH--H
Q 023494 115 DLPLDVHLMIVEP----E---QRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKD----LGAK--AGVVLNPATSL--S 179 (281)
Q Consensus 115 ~~~idaHLmv~dp----~---~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~----~G~k--~Glai~p~t~i--e 179 (281)
+.|+.+.=|++.+ . .-+..+.++|+|+|-+-.-. .+-.+.+..|++ .|.. +.-.|+-+..+ .
T Consensus 21 ~~PI~VQSMtnT~T~Dv~aTv~QI~~L~~aG~eiVRvaVp~---~~~A~al~~I~~~l~~~~~~vPLVADiHF~~~~al~ 97 (406)
T 4g9p_A 21 AHPIAVQSMTNTPTRDVEATTAQVLELHRAGSEIVRLTVND---EEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLR 97 (406)
T ss_dssp TSCCEEEEECCSCTTCHHHHHHHHHHHHHHTCSEEEEECCS---HHHHHHHHHHHHHHHHTTCCCCEEEECCSSHHHHHH
T ss_pred CCceeeeecCCCCcccHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHhHHHHHHHHHhcCCCCceEeeecccHHHHHH
Confidence 4689999999654 2 23567889999999887642 333455555554 4554 44456544322 2
Q ss_pred HHHHhhccCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecC
Q 023494 180 AIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGG 234 (281)
Q Consensus 180 ~~~~~l~~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGG 234 (281)
.+......+|.+ -+|||--|.. ...-++++++.+...+++..+.|.|-.|
T Consensus 98 a~~~~a~~~dki---RINPGNig~~--~k~~e~~~~vv~~ak~~~~pIRIGVN~G 147 (406)
T 4g9p_A 98 KYPKMAEALDKF---RINPGTLGRG--RHKDEHFAEMIRIAMDLGKPVRIGANWG 147 (406)
T ss_dssp HCHHHHHHCSEE---EECTTSSCST--HHHHHHHHHHHHHHHHHTCCEEEEEEGG
T ss_pred HHHHHHhHHhhc---ccCccccCcc--ccHHHHHHHHHHHHHHccCCceeccccc
Confidence 223344457776 5699975532 1223456666666666666778888655
No 440
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=83.92 E-value=14 Score=31.16 Aligned_cols=142 Identities=13% Similarity=0.109 Sum_probs=74.0
Q ss_pred ChhhHHHHHHHcCCCEEEEc-cccc----ccccHHHHHHHHHHcCCcEE-EE--ECCC--CC------HHHHHHhhcc--
Q 023494 126 EPEQRVPDFIKAGADIVSVH-CEQS----STIHLHRTLNQIKDLGAKAG-VV--LNPA--TS------LSAIECVLDV-- 187 (281)
Q Consensus 126 dp~~~i~~~~~aGAd~Itvh-~Ea~----~~~~i~~~l~~ik~~G~k~G-la--i~p~--t~------ie~~~~~l~~-- 187 (281)
++.+.++.+.++|.+.|-+. .... ...++.++.+.++++|+++. +. .+.. .+ ++.++..++.
T Consensus 15 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~ 94 (278)
T 1i60_A 15 NLKLDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPLALNALVFFNNRDEKGHNEIITEFKGMMETCK 94 (278)
T ss_dssp CHHHHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCCeeeeccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 34556788888999998887 4421 12457778888888998875 32 1221 11 2333333332
Q ss_pred ---CCEEEEEeecCCCCCCcc-----chhHHHHHHHHHHHhhhcCCCCeEEEecCC-----ChhcHHHHHH-cCCc-EEE
Q 023494 188 ---VDLVLIMSVNPGFGGQSF-----IESQVKKISDLRRMCLEKGVNPWIEVDGGV-----GPKNAYKVIE-AGAN-ALV 252 (281)
Q Consensus 188 ---vD~IlvmsV~pG~~GQ~f-----~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI-----~~e~i~~~~~-aGAD-~~V 252 (281)
+++|.+ +||.....+ .....+.++++.+...+.|..+-++-.++- +++.+..+++ .+.+ +=+
T Consensus 95 ~lG~~~v~~---~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~l~~~~~~~~~g~ 171 (278)
T 1i60_A 95 TLGVKYVVA---VPLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGVKIALEFVGHPQCTVNTFEQAYEIVNTVNRDNVGL 171 (278)
T ss_dssp HHTCCEEEE---ECCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCTTBSSCSHHHHHHHHHHHCCTTEEE
T ss_pred HcCCCEEEE---ecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEEecCCccchhcCHHHHHHHHHHhCCCCeeE
Confidence 566655 455432212 233455666666666655544444444432 3455555544 3322 211
Q ss_pred ---EcccccCCCCHHHHHHHH
Q 023494 253 ---AGSAVFGAKDYAEAIKGI 270 (281)
Q Consensus 253 ---vGSaIf~a~dp~~~~~~l 270 (281)
.|-......||.+.++.+
T Consensus 172 ~~D~~h~~~~g~d~~~~~~~~ 192 (278)
T 1i60_A 172 VLDSFHFHAMGSNIESLKQAD 192 (278)
T ss_dssp EEEHHHHHHTTCCHHHHHTSC
T ss_pred EEEeEEEeecCCCHHHHHhcC
Confidence 233333446776655444
No 441
>1ypx_A Putative vitamin-B12 independent methionine synth protein; alpha-beta protein; 2.60A {Listeria monocytogenes}
Probab=83.89 E-value=1.8 Score=40.37 Aligned_cols=76 Identities=12% Similarity=0.186 Sum_probs=43.2
Q ss_pred HHHHHHHHHcCCCeEEEEeeeCcc-c--------ccccCC-----HHHHHHcCcC----C-CCCeeEEEEec--------
Q 023494 73 GEQVKAVELAGCDWIHVDVMDGRF-V--------PNITIG-----PLVVDALRPV----T-DLPLDVHLMIV-------- 125 (281)
Q Consensus 73 ~~~l~~l~~~G~d~iHiDImDG~f-v--------pn~~~G-----~~~I~~ir~~----t-~~~idaHLmv~-------- 125 (281)
.++++.+.++|+++|++|--.... . |..... ...++.++.. + +.++.+|+--.
T Consensus 170 ~~ei~~l~~aG~~~IQiDeP~l~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~n~~~~~~~~~~~i~~HiC~gn~~s~~~~ 249 (375)
T 1ypx_A 170 QKAIQAFYDAGCRYLQLDDTSWSYLCSDEQREVVRQRGFDPETLQETYKNLINEAIKHKPADMVITMHICRGNFRSTWIA 249 (375)
T ss_dssp HHHHHHHHHTTCCEEEEEECHHHHTTSCC--------CCSTTTHHHHHHHHHHHHTTTCCTTCEEEEEECCC--------
T ss_pred HHHHHHHHHCCCCEEEecCCchhhhhccchhcccccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeccccCCcccc
Confidence 355677889999999999432111 1 111111 2224444332 2 35666676532
Q ss_pred --ChhhHHHHHH-HcCCCEEEEcccc
Q 023494 126 --EPEQRVPDFI-KAGADIVSVHCEQ 148 (281)
Q Consensus 126 --dp~~~i~~~~-~aGAd~Itvh~Ea 148 (281)
+-...++.+. +.++|.+++-+.+
T Consensus 250 ~g~~~~i~~~l~~~~~~d~i~lE~~~ 275 (375)
T 1ypx_A 250 EGGYGPVAETLFGKLNIDGFFLEYDN 275 (375)
T ss_dssp --CCSGGGHHHHTTCCCSEEEEECCS
T ss_pred ccchHHHHHHHHhhCCCCEEEEEecC
Confidence 1123467777 9999999988654
No 442
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=83.88 E-value=5.8 Score=36.93 Aligned_cols=112 Identities=9% Similarity=0.063 Sum_probs=73.4
Q ss_pred ChhhHH---HHHHHcCCCEEEEcccccccccHHHHHHHHHHc---CCcEEEEECCCCCHHHHHHhhcc-----CCEEEEE
Q 023494 126 EPEQRV---PDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL---GAKAGVVLNPATSLSAIECVLDV-----VDLVLIM 194 (281)
Q Consensus 126 dp~~~i---~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~---G~k~Glai~p~t~ie~~~~~l~~-----vD~Ilvm 194 (281)
+|+.+. +.+.+.|.+.+=++.-. ..+.-.+.++++|+. ++.+.+..|.....+....+++. +++|
T Consensus 155 ~~e~~~~~a~~~~~~G~~~iKlK~g~-~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~i--- 230 (392)
T 3ddm_A 155 NPENPEDVVARKAAEGYRAFKLKVGF-DDARDVRNALHVRELLGAATPLMADANQGWDLPRARQMAQRLGPAQLDWL--- 230 (392)
T ss_dssp CSSSHHHHHHHHHHHTCCCEEEECSS-CHHHHHHHHHHHHHHHCSSSCEEEECTTCCCHHHHHHHHHHHGGGCCSEE---
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCC-CHHHHHHHHHHHHHhcCCCceEEEeCCCCCCHHHHHHHHHHHHHhCCCEE---
Confidence 365544 45567899999888643 123334567777775 46788888888888765555432 3444
Q ss_pred eecCCCCCCccchhH-HHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEE
Q 023494 195 SVNPGFGGQSFIESQ-VKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVA 253 (281)
Q Consensus 195 sV~pG~~GQ~f~~~~-l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~Vv 253 (281)
.|++.+.. ++-++++++.. +++|..|+.+. .+.+..+++.| +|++.+
T Consensus 231 -------EeP~~~~d~~~~~~~l~~~~-----~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~ 280 (392)
T 3ddm_A 231 -------EEPLRADRPAAEWAELAQAA-----PMPLAGGENIAGVAAFETALAARSLRVMQP 280 (392)
T ss_dssp -------ECCSCTTSCHHHHHHHHHHC-----SSCEEECTTCCSHHHHHHHHHHTCEEEECC
T ss_pred -------ECCCCccchHHHHHHHHHhc-----CCCEEeCCCCCCHHHHHHHHHcCCCCEEEe
Confidence 25555555 66666666543 47999999987 77888887766 566544
No 443
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=83.85 E-value=8.2 Score=33.29 Aligned_cols=113 Identities=15% Similarity=0.068 Sum_probs=66.5
Q ss_pred HHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEE--cc-cc-
Q 023494 73 GEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSV--HC-EQ- 148 (281)
Q Consensus 73 ~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itv--h~-Ea- 148 (281)
.++++.+.+.|+|.+.+|.... .+-.+-.++++.+++. +.++.+. +.+ .+..+.+.++|+|+|.+ +. ..
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~---~~p~~l~~~i~~~~~~-g~~v~~~--v~t-~eea~~a~~~Gad~Ig~~~~g~t~~ 163 (232)
T 3igs_A 91 LDDVDALAQAGAAIIAVDGTAR---QRPVAVEALLARIHHH-HLLTMAD--CSS-VDDGLACQRLGADIIGTTMSGYTTP 163 (232)
T ss_dssp HHHHHHHHHHTCSEEEEECCSS---CCSSCHHHHHHHHHHT-TCEEEEE--CCS-HHHHHHHHHTTCSEEECTTTTSSSS
T ss_pred HHHHHHHHHcCCCEEEECcccc---CCHHHHHHHHHHHHHC-CCEEEEe--CCC-HHHHHHHHhCCCCEEEEcCccCCCC
Confidence 3557788889999998875432 1112335677777764 4554442 233 33667788999999964 32 11
Q ss_pred --cccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhc-cCCEEEEE
Q 023494 149 --SSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD-VVDLVLIM 194 (281)
Q Consensus 149 --~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~-~vD~Ilvm 194 (281)
....++ +.++.+++.++ +-++..-=...+.+..++. .+|-|++.
T Consensus 164 ~~~~~~~~-~~i~~l~~~~i-pvIA~GGI~t~~d~~~~~~~GadgV~VG 210 (232)
T 3igs_A 164 DTPEEPDL-PLVKALHDAGC-RVIAEGRYNSPALAAEAIRYGAWAVTVG 210 (232)
T ss_dssp SCCSSCCH-HHHHHHHHTTC-CEEEESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred CCCCCCCH-HHHHHHHhcCC-cEEEECCCCCHHHHHHHHHcCCCEEEEe
Confidence 011233 55666776633 3344433235666777666 48988873
No 444
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=83.83 E-value=6.7 Score=33.83 Aligned_cols=113 Identities=12% Similarity=0.029 Sum_probs=65.4
Q ss_pred HHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEE--ccc-c-
Q 023494 73 GEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSV--HCE-Q- 148 (281)
Q Consensus 73 ~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itv--h~E-a- 148 (281)
.++++.+.+.|+|.+.+|.... .+-..-.++++.+++. +.++.+. +.+ .+..+.+.++|+|+|.+ |.- .
T Consensus 91 ~~~i~~~~~aGad~I~l~~~~~---~~p~~l~~~i~~~~~~-g~~v~~~--v~t-~eea~~a~~~Gad~Ig~~~~g~t~~ 163 (229)
T 3q58_A 91 LQDVDALAQAGADIIAFDASFR---SRPVDIDSLLTRIRLH-GLLAMAD--CST-VNEGISCHQKGIEFIGTTLSGYTGP 163 (229)
T ss_dssp HHHHHHHHHHTCSEEEEECCSS---CCSSCHHHHHHHHHHT-TCEEEEE--CSS-HHHHHHHHHTTCSEEECTTTTSSSS
T ss_pred HHHHHHHHHcCCCEEEECcccc---CChHHHHHHHHHHHHC-CCEEEEe--cCC-HHHHHHHHhCCCCEEEecCccCCCC
Confidence 3567788889999998875432 1112335677777764 4554442 233 33667788999999954 321 1
Q ss_pred --cccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhc-cCCEEEEE
Q 023494 149 --SSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD-VVDLVLIM 194 (281)
Q Consensus 149 --~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~-~vD~Ilvm 194 (281)
....++ +.++.+++.++ +-++-.-=...+.+..++. .+|-|++.
T Consensus 164 ~~~~~~~~-~li~~l~~~~i-pvIA~GGI~t~~d~~~~~~~GadgV~VG 210 (229)
T 3q58_A 164 ITPVEPDL-AMVTQLSHAGC-RVIAEGRYNTPALAANAIEHGAWAVTVG 210 (229)
T ss_dssp CCCSSCCH-HHHHHHHTTTC-CEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred CcCCCCCH-HHHHHHHHcCC-CEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 001233 55666666533 3344332234566666665 48888773
No 445
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=83.82 E-value=2.4 Score=38.98 Aligned_cols=111 Identities=14% Similarity=0.196 Sum_probs=72.9
Q ss_pred cChhhHHH---HHHHcCCCEEEEcccccccccHHHHHHHHHHc--CCcEEEEECCCCCHHHHHHhhcc-----CCEEEEE
Q 023494 125 VEPEQRVP---DFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL--GAKAGVVLNPATSLSAIECVLDV-----VDLVLIM 194 (281)
Q Consensus 125 ~dp~~~i~---~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~--G~k~Glai~p~t~ie~~~~~l~~-----vD~Ilvm 194 (281)
.+|+.+.+ .+.+.|.+.+-+|.. +..++ +.++++|+. ++.+.+..|.....+. ..+++. +++|
T Consensus 147 ~~~~~~~~~a~~~~~~G~~~iKik~~--~~~d~-~~v~avr~a~~~~~l~vDan~~~~~~~-~~~~~~l~~~~i~~i--- 219 (375)
T 1r0m_A 147 ADEQATVDLVRRHVEQGYRRIKLKIK--PGWDV-QPVRATREAFPDIRLTVDANSAYTLAD-AGRLRQLDEYDLTYI--- 219 (375)
T ss_dssp SSHHHHHHHHHHHHHTTCSCEEEECB--TTBSH-HHHHHHHHHCTTSCEEEECTTCCCGGG-HHHHHTTGGGCCSCE---
T ss_pred CCHHHHHHHHHHHHHhcccEEEEecC--hHHHH-HHHHHHHHHcCCCeEEEeCCCCCCHHH-HHHHHHHHhCCCcEE---
Confidence 36766544 456789999998863 22333 456777764 6788888887766665 555443 3333
Q ss_pred eecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEEc
Q 023494 195 SVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVAG 254 (281)
Q Consensus 195 sV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~VvG 254 (281)
.|++.+..++-.+++++.. +++|+.|+.+. .+.+..+++.| +|++.+=
T Consensus 220 -------EqP~~~~d~~~~~~l~~~~-----~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik 269 (375)
T 1r0m_A 220 -------EQPLAWDDLVDHAELARRI-----RTPLCLDESVASASDARKALALGAGGVINLK 269 (375)
T ss_dssp -------ECCSCTTCSHHHHHHHHHC-----SSCEEESTTCCSHHHHHHHHHHTSCSEEEEC
T ss_pred -------ECCCCcccHHHHHHHHHhC-----CCCEEecCccCCHHHHHHHHHhCCCCEEEEC
Confidence 2556555555566666543 47899999986 77888887766 7888773
No 446
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=83.77 E-value=2.9 Score=37.39 Aligned_cols=73 Identities=11% Similarity=0.049 Sum_probs=49.0
Q ss_pred CCHHHHHHhhcc-CCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEE-ecCCChhcHHHHHHcCCcEEEE
Q 023494 176 TSLSAIECVLDV-VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEV-DGGVGPKNAYKVIEAGANALVA 253 (281)
Q Consensus 176 t~ie~~~~~l~~-vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~V-DGGI~~e~i~~~~~aGAD~~Vv 253 (281)
.|.+..+.|... ++.|-+.+ +|++.+. .++.|+.+|+.. +++|.. |+-+++..+.++..+|||.+.+
T Consensus 80 dp~~~A~~y~~~GA~~IsVlt-d~~~f~G-----s~~~L~~ir~~v-----~lPVl~Kdfi~d~~qi~ea~~~GAD~VlL 148 (272)
T 3tsm_A 80 DPPALAKAYEEGGAACLSVLT-DTPSFQG-----APEFLTAARQAC-----SLPALRKDFLFDPYQVYEARSWGADCILI 148 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEEC-CSTTTCC-----CHHHHHHHHHTS-----SSCEEEESCCCSTHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHHCCCCEEEEec-cccccCC-----CHHHHHHHHHhc-----CCCEEECCccCCHHHHHHHHHcCCCEEEE
Confidence 445666666554 88887766 4554321 344555555442 355544 6667788999999999999999
Q ss_pred cccccC
Q 023494 254 GSAVFG 259 (281)
Q Consensus 254 GSaIf~ 259 (281)
+.+...
T Consensus 149 i~a~L~ 154 (272)
T 3tsm_A 149 IMASVD 154 (272)
T ss_dssp ETTTSC
T ss_pred cccccC
Confidence 987764
No 447
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=83.74 E-value=22 Score=31.76 Aligned_cols=174 Identities=15% Similarity=0.114 Sum_probs=95.7
Q ss_pred cCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCH----HHHHHcCcC--CCCCeeEEEEecChhh---HHHHHHHc
Q 023494 67 ANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGP----LVVDALRPV--TDLPLDVHLMIVEPEQ---RVPDFIKA 137 (281)
Q Consensus 67 ~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~----~~I~~ir~~--t~~~idaHLmv~dp~~---~i~~~~~a 137 (281)
.|+..+++.++.+.+.|++-+-+ =|+.--..++.. ++++...+. -..|+.++.-.++..+ +.+.+.++
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v---~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~ 106 (306)
T 1o5k_A 30 LDLESYERLVRYQLENGVNALIV---LGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKL 106 (306)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEE---SSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEe---CccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhc
Confidence 56677888899999999997633 233222223333 334443332 2478888887777654 44556788
Q ss_pred CCCEEEEcccc---cccccHHHHHHHHHH-cCCcEEEEECCC-----CCHHHHHHhh-ccCCEEEEEeecCCCCCCccch
Q 023494 138 GADIVSVHCEQ---SSTIHLHRTLNQIKD-LGAKAGVVLNPA-----TSLSAIECVL-DVVDLVLIMSVNPGFGGQSFIE 207 (281)
Q Consensus 138 GAd~Itvh~Ea---~~~~~i~~~l~~ik~-~G~k~Glai~p~-----t~ie~~~~~l-~~vD~IlvmsV~pG~~GQ~f~~ 207 (281)
|||.+.+..=. .+.+.+.+..+.+-+ .++.+.+=-+|. -+.+.+.++. +...++.+= +. .|
T Consensus 107 Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiK--ds--sg----- 177 (306)
T 1o5k_A 107 GANGVLVVTPYYNKPTQEGLYQHYKYISERTDLGIVVYNVPGRTGVNVLPETAARIAADLKNVVGIX--EA--NP----- 177 (306)
T ss_dssp TCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEE--EC--CC-----
T ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHHhCCCEEEEe--CC--CC-----
Confidence 99988775321 112233344444333 355555544442 3556677776 433444321 11 11
Q ss_pred hHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEccc
Q 023494 208 SQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSA 256 (281)
Q Consensus 208 ~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSa 256 (281)
.+.++.++++..+..+.++.+ =.|-. +.+-.....|++.+|.|.+
T Consensus 178 -d~~~~~~~~~~~~~~~~~f~v--~~G~d-~~~l~~l~~G~~G~is~~a 222 (306)
T 1o5k_A 178 -DIDQIDRTVSLTKQARSDFMV--WSGND-DRTFYLLCAGGDGVISVVS 222 (306)
T ss_dssp -CHHHHHHHHHHHHHHCTTCEE--EESSG-GGHHHHHHHTCCEEEESGG
T ss_pred -CHHHHHHHHHhcCCCCCcEEE--EECcH-HHHHHHHHCCCCEEEecHH
Confidence 144555555554421113443 33333 3466668899999999955
No 448
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=83.74 E-value=1.9 Score=40.14 Aligned_cols=113 Identities=12% Similarity=0.082 Sum_probs=73.6
Q ss_pred ChhhHHH---HHHHcCCCEEEEccc----cc--------------ccccHHHHHHHHHH-c--CCcEEEEECCCCCHHHH
Q 023494 126 EPEQRVP---DFIKAGADIVSVHCE----QS--------------STIHLHRTLNQIKD-L--GAKAGVVLNPATSLSAI 181 (281)
Q Consensus 126 dp~~~i~---~~~~aGAd~Itvh~E----a~--------------~~~~i~~~l~~ik~-~--G~k~Glai~p~t~ie~~ 181 (281)
+|+.+.+ .+.+.|.+.+=+|.. .. ......+.++++|+ . ++.+.+..|.....+..
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~~~a 231 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAVGPDVDIIAEMHAFTDTTSA 231 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHH
Confidence 6776654 356789999999852 00 01224467777777 3 46677788877777665
Q ss_pred HHhhcc-----CCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEE
Q 023494 182 ECVLDV-----VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVA 253 (281)
Q Consensus 182 ~~~l~~-----vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~Vv 253 (281)
.++++. +++| .|++.+..++-.+++++.. +++|..|+.+. ++.+.++++.| +|++.+
T Consensus 232 ~~~~~~l~~~~i~~i----------E~P~~~~~~~~~~~l~~~~-----~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 295 (407)
T 2o56_A 232 IQFGRMIEELGIFYY----------EEPVMPLNPAQMKQVADKV-----NIPLAAGERIYWRWGYRPFLENGSLSVIQP 295 (407)
T ss_dssp HHHHHHHGGGCCSCE----------ECSSCSSSHHHHHHHHHHC-----CSCEEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHHhcCCCEE----------eCCCChhhHHHHHHHHHhC-----CCCEEeCCCcCCHHHHHHHHHcCCCCEEec
Confidence 555443 3333 2455555566666666543 47999999997 78888888777 677754
No 449
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=83.68 E-value=23 Score=31.31 Aligned_cols=167 Identities=14% Similarity=0.128 Sum_probs=85.3
Q ss_pred ccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCH----HHHHHcCcCCCCCeeEEEEecChhh---HHHHHHHcC
Q 023494 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGP----LVVDALRPVTDLPLDVHLMIVEPEQ---RVPDFIKAG 138 (281)
Q Consensus 66 a~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~----~~I~~ir~~t~~~idaHLmv~dp~~---~i~~~~~aG 138 (281)
..|+..+++.++.+.+.|++-+-+ =|+.--..++.. ++++...+..+. +.++.-.++..+ +.+.+.++|
T Consensus 15 ~iD~~~l~~lv~~li~~Gv~gl~v---~GttGE~~~Ls~~Er~~v~~~~~~~~~g-vi~Gvg~~~t~~ai~la~~A~~~G 90 (286)
T 2r91_A 15 RLDPELFANHVKNITSKGVDVVFV---AGTTGLGPALSLQEKMELTDAATSAARR-VIVQVASLNADEAIALAKYAESRG 90 (286)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEE---TSTTTTGGGSCHHHHHHHHHHHHHHCSS-EEEECCCSSHHHHHHHHHHHHHTT
T ss_pred ccCHHHHHHHHHHHHHCCCCEEEE---CccccChhhCCHHHHHHHHHHHHHHhCC-EEEeeCCCCHHHHHHHHHHHHhcC
Confidence 367778889999999999987633 243222223333 334443443333 556655555543 444566788
Q ss_pred CCEEEEcccc----cccccHHHHHHHHHH-cCCcEEEEECCC-----CCHHHHHHhhccCCEEEEEeecCCCCCCccchh
Q 023494 139 ADIVSVHCEQ----SSTIHLHRTLNQIKD-LGAKAGVVLNPA-----TSLSAIECVLDVVDLVLIMSVNPGFGGQSFIES 208 (281)
Q Consensus 139 Ad~Itvh~Ea----~~~~~i~~~l~~ik~-~G~k~Glai~p~-----t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~~~ 208 (281)
||.+.+..-. .+.+.+.+..+.+-+ .++.+.+=-+|. -+.+.+.+ .+ .++.+ |.-..
T Consensus 91 adavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~-~p--nivgi----------Kds~g 157 (286)
T 2r91_A 91 AEAVASLPPYYFPRLSERQIAKYFRDLCSAVSIPVFLYNYPAAVGRDVDARAAKE-LG--CIRGV----------KDTNE 157 (286)
T ss_dssp CSEEEECCSCSSTTCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSSCCCHHHHHH-HS--CEEEE----------EECCS
T ss_pred CCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEeChhhcCCCCCHHHHHh-cC--CEEEE----------EeCCC
Confidence 8887775221 112223333333332 355555543442 23344444 22 12211 11111
Q ss_pred HHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEccc
Q 023494 209 QVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSA 256 (281)
Q Consensus 209 ~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSa 256 (281)
.+.++.++++ .+ .++.+ .. |-. +.+-.....|++.+|.|.+
T Consensus 158 d~~~~~~~~~-~~---~~f~v-~~-G~d-~~~~~~l~~G~~G~is~~a 198 (286)
T 2r91_A 158 SLAHTLAYKR-YL---PQARV-YN-GSD-SLVFASFAVRLDGVVASSA 198 (286)
T ss_dssp CHHHHHHHHH-HC---TTSEE-EE-CCG-GGHHHHHHTTCSEECCGGG
T ss_pred CHHHHHHHHh-cC---CCEEE-EE-ccH-HHHHHHHHcCCCEEEecHH
Confidence 2445555555 32 23544 23 333 3455678899999999965
No 450
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=83.50 E-value=1.8 Score=38.07 Aligned_cols=138 Identities=11% Similarity=0.008 Sum_probs=71.6
Q ss_pred cccccCCCCCceEeEEEeccCc-cCHHHHHHHHHHcCCCeEEEEeeeC-cccccccCCHHHHHHcCcCCCCCeeEEEEec
Q 023494 48 ARVDKFSKSDIIVSPSILSANF-AKLGEQVKAVELAGCDWIHVDVMDG-RFVPNITIGPLVVDALRPVTDLPLDVHLMIV 125 (281)
Q Consensus 48 ~~~~~~~~~~~~i~pSila~D~-~~l~~~l~~l~~~G~d~iHiDImDG-~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~ 125 (281)
+++-.-+.+..+|+-+.++.-. ..+++.++.+.+.|.+.+++...+. .+.+ .......+++.-+..++.+.++-...
T Consensus 13 ~~~~~~~~~~~klgi~~~~~~~~~~~~~~l~~a~~~G~~~vEl~~~~~~~~~~-~~~~~~~~~~~l~~~gl~i~~~~~~~ 91 (296)
T 2g0w_A 13 MTNANGNLKKCPITISSYTLGTEVSFPKRVKVAAENGFDGIGLRAENYVDALA-AGLTDEDMLRILDEHNMKVTEVEYIT 91 (296)
T ss_dssp ---------CCCEEECGGGGTTTSCHHHHHHHHHHTTCSEEEEEHHHHHHHHH-TTCCHHHHHHHHHHTTCEEEEEECBC
T ss_pred cccCCCCcCCCCceeechhcCCCCCHHHHHHHHHHcCCCEEEeCHHHHHHHHh-cCCcHHHHHHHHHHcCCceEeehhhh
Confidence 3333333444567777776644 7899999999999999998864211 0101 11233334443333566555432222
Q ss_pred -----Chh---------hHHHHHHHcCCCEEEEcccc-cc----cccHHHHHHHHHHcCCcEEEEECCCC---CHHHHHH
Q 023494 126 -----EPE---------QRVPDFIKAGADIVSVHCEQ-SS----TIHLHRTLNQIKDLGAKAGVVLNPAT---SLSAIEC 183 (281)
Q Consensus 126 -----dp~---------~~i~~~~~aGAd~Itvh~Ea-~~----~~~i~~~l~~ik~~G~k~Glai~p~t---~ie~~~~ 183 (281)
+|. +.++.+.+.|++.|.++.-. .+ .+.+.++.+.+ +|+++++--.+.+ ..+.+..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~g~~~~~~~~~~~~~l~~l~~~a--~Gv~l~lE~~~~~~~~~~~~~~~ 169 (296)
T 2g0w_A 92 QWGTAEDRTAEQQKKEQTTFHMARLFGVKHINCGLLEKIPEEQIIVALGELCDRA--EELIIGLEFMPYSGVADLQAAWR 169 (296)
T ss_dssp CCSSTTTCCHHHHHHHHHHHHHHHHHTCCEEEECCCSCCCHHHHHHHHHHHHHHH--TTSEEEEECCTTSSSCSHHHHHH
T ss_pred ccccCChHHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCHHHHHHHHHHHHHHh--cCCEEEEEecCCCCCCCHHHHHH
Confidence 221 34556778899999886421 00 11233444444 6888887654432 3344555
Q ss_pred hhccC
Q 023494 184 VLDVV 188 (281)
Q Consensus 184 ~l~~v 188 (281)
+++.+
T Consensus 170 l~~~v 174 (296)
T 2g0w_A 170 VAEAC 174 (296)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 55544
No 451
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=83.50 E-value=2.6 Score=36.09 Aligned_cols=131 Identities=15% Similarity=0.116 Sum_probs=74.6
Q ss_pred ceEeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeE-EEEe--cChh------
Q 023494 58 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDV-HLMI--VEPE------ 128 (281)
Q Consensus 58 ~~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~ida-HLmv--~dp~------ 128 (281)
++++-+-.+..-..+++.++.+.+.|.+.+++...+.+..+ -....+.++++-+..++.+.. |.-. .+|.
T Consensus 4 Mk~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~-~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (281)
T 3u0h_A 4 MEPCLHPTLVDETSLVLYLDLARETGYRYVDVPFHWLEAEA-ERHGDAAVEAMFQRRGLVLANLGLPLNLYDSEPVFLRE 82 (281)
T ss_dssp CEEEECGGGTTCCCHHHHHHHHHHTTCSEECCCHHHHHHHH-HHHCHHHHHHHHHTTTCEECCEECCSCTTSCHHHHHHH
T ss_pred chhhhcchhccCCCHHHHHHHHHHcCCCEEEecHHHHHHHh-cccCHHHHHHHHHHcCCceEEecccccccCCCHHHHHH
Confidence 45666666666679999999999999999887543321000 012333344333334554432 2211 1221
Q ss_pred -----hHHHHHHHcCCCEEEEcccccc-----------cccHHHHHHHHHHcCCcEEEEECC-----------CCCHHHH
Q 023494 129 -----QRVPDFIKAGADIVSVHCEQSS-----------TIHLHRTLNQIKDLGAKAGVVLNP-----------ATSLSAI 181 (281)
Q Consensus 129 -----~~i~~~~~aGAd~Itvh~Ea~~-----------~~~i~~~l~~ik~~G~k~Glai~p-----------~t~ie~~ 181 (281)
+.++.+.+.|+..|.++.-... .+.+.++.+.++++|+++++--.+ -...+.+
T Consensus 83 ~~~~~~~i~~A~~lG~~~v~~~~~p~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~~~~~~~ 162 (281)
T 3u0h_A 83 LSLLPDRARLCARLGARSVTAFLWPSMDEEPVRYISQLARRIRQVAVELLPLGMRVGLEYVGPHHLRHRRYPFVQSLADL 162 (281)
T ss_dssp HHTHHHHHHHHHHTTCCEEEEECCSEESSCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCGGGCCSSEECCCSHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEeecCCCCCcchhhHHHHHHHHHHHHHHHHHcCCEEEEEeccccccccccccccCCHHHH
Confidence 2456677889999986532100 123455666677889998886543 1245566
Q ss_pred HHhhccCC
Q 023494 182 ECVLDVVD 189 (281)
Q Consensus 182 ~~~l~~vD 189 (281)
..+++.++
T Consensus 163 ~~l~~~v~ 170 (281)
T 3u0h_A 163 KTFWEAIG 170 (281)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHcC
Confidence 66666543
No 452
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=83.47 E-value=5 Score=34.18 Aligned_cols=122 Identities=13% Similarity=0.181 Sum_probs=69.9
Q ss_pred EeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCC-HHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHc-
Q 023494 60 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIG-PLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA- 137 (281)
Q Consensus 60 i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G-~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~a- 137 (281)
+-.-++--|. ++.++.+.++|+|++++= .-+. ... ...++.+++. +..+-+.+-..+|...++.+.+.
T Consensus 67 ~~v~lmv~d~---~~~i~~~~~agad~v~vH-----~~~~-~~~~~~~~~~i~~~-g~~igv~~~p~t~~e~~~~~~~~~ 136 (228)
T 1h1y_A 67 LDCHLMVTNP---SDYVEPLAKAGASGFTFH-----IEVS-RDNWQELIQSIKAK-GMRPGVSLRPGTPVEEVFPLVEAE 136 (228)
T ss_dssp EEEEEESSCG---GGGHHHHHHHTCSEEEEE-----GGGC-TTTHHHHHHHHHHT-TCEEEEEECTTSCGGGGHHHHHSS
T ss_pred EEEEEEecCH---HHHHHHHHHcCCCEEEEC-----CCCc-ccHHHHHHHHHHHc-CCCEEEEEeCCCCHHHHHHHHhcC
Confidence 3344454565 445777778899999652 1121 123 4668887764 56666545435666666777776
Q ss_pred -CCCEEEEccccc-----c-cccHHHHHHHHHHc--CCcEEEE--ECCCCCHHHHHHhhc-cCCEEEEEe
Q 023494 138 -GADIVSVHCEQS-----S-TIHLHRTLNQIKDL--GAKAGVV--LNPATSLSAIECVLD-VVDLVLIMS 195 (281)
Q Consensus 138 -GAd~Itvh~Ea~-----~-~~~i~~~l~~ik~~--G~k~Gla--i~p~t~ie~~~~~l~-~vD~Ilvms 195 (281)
++|+|.+..-.. . .....+.++.+|+. ++.+.+. |+++ .+.+++. .+|.+.+.+
T Consensus 137 ~~~d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~~~~~pi~v~GGI~~~----ni~~~~~aGaD~vvvGs 202 (228)
T 1h1y_A 137 NPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVDGGLGPS----TIDVAASAGANCIVAGS 202 (228)
T ss_dssp SCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEEESSCSTT----THHHHHHHTCCEEEESH
T ss_pred CCCCEEEEEeecCCCCcccCCHHHHHHHHHHHHhcCCCCEEEECCcCHH----HHHHHHHcCCCEEEECH
Confidence 899998843210 0 12233446666664 4555544 5543 3444444 689988743
No 453
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=83.46 E-value=2.1 Score=38.58 Aligned_cols=133 Identities=16% Similarity=0.236 Sum_probs=83.7
Q ss_pred CceEeEEEeccCccCHHHHHHHHHHcCCCeEEEEee--------e--C-cccccccCCHHHHHHcCcCCCCCeeEEEEe-
Q 023494 57 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVM--------D--G-RFVPNITIGPLVVDALRPVTDLPLDVHLMI- 124 (281)
Q Consensus 57 ~~~i~pSila~D~~~l~~~l~~l~~~G~d~iHiDIm--------D--G-~fvpn~~~G~~~I~~ir~~t~~~idaHLmv- 124 (281)
...+...|+.-|+..+.++.+.+.+. +|.|.+-.- | | .+.....+-.++++++|+..+.|+.+.+-.
T Consensus 58 ~~~~~~QL~g~~~~~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G 136 (318)
T 1vhn_A 58 ERNVAVQIFGSEPNELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLG 136 (318)
T ss_dssp CTTEEEEEECSCHHHHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred CCeEEEEeCCCCHHHHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCC
Confidence 34678888877888888888999888 888655421 1 1 011112334466788887767787776543
Q ss_pred ---cChhhHHHHHHHcCCCEEEEccccc-----ccccHHHHHHHHHHcCCcEEEEECCC-CCHHHHHHhhc--cCCEEEE
Q 023494 125 ---VEPEQRVPDFIKAGADIVSVHCEQS-----STIHLHRTLNQIKDLGAKAGVVLNPA-TSLSAIECVLD--VVDLVLI 193 (281)
Q Consensus 125 ---~dp~~~i~~~~~aGAd~Itvh~Ea~-----~~~~i~~~l~~ik~~G~k~Glai~p~-t~ie~~~~~l~--~vD~Ilv 193 (281)
.++.++++.+.++|+|+|++|.-.. ...+. +.+..+++ ++. |..+-+ ...+.+.+.+. .+|.|.+
T Consensus 137 ~~~~~~~~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~-~~i~~i~~-~ip--Vi~~GgI~s~~da~~~l~~~gad~V~i 212 (318)
T 1vhn_A 137 WEKNEVEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEW-KALSVLEK-RIP--TFVSGDIFTPEDAKRALEESGCDGLLV 212 (318)
T ss_dssp SSSCCHHHHHHHHHHTTCCEEEEESSCTTTTTSSCCCG-GGGGGSCC-SSC--EEEESSCCSHHHHHHHHHHHCCSEEEE
T ss_pred CChHHHHHHHHHHHHhCCCEEEEcCCCccccCCCCcCH-HHHHHHHc-CCe--EEEECCcCCHHHHHHHHHcCCCCEEEE
Confidence 2333578888999999999995321 11122 45566665 433 333444 46677777776 4999977
Q ss_pred E
Q 023494 194 M 194 (281)
Q Consensus 194 m 194 (281)
.
T Consensus 213 G 213 (318)
T 1vhn_A 213 A 213 (318)
T ss_dssp S
T ss_pred C
Confidence 3
No 454
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=83.42 E-value=18 Score=32.63 Aligned_cols=135 Identities=15% Similarity=0.138 Sum_probs=76.3
Q ss_pred HHHHHHcCCCEEEEccccccc--ccHHHHHHHHH-HcCCcEEE-EECCCCCHHHHHHhhc-----cCCEEEEEeecCCCC
Q 023494 131 VPDFIKAGADIVSVHCEQSST--IHLHRTLNQIK-DLGAKAGV-VLNPATSLSAIECVLD-----VVDLVLIMSVNPGFG 201 (281)
Q Consensus 131 i~~~~~aGAd~Itvh~Ea~~~--~~i~~~l~~ik-~~G~k~Gl-ai~p~t~ie~~~~~l~-----~vD~IlvmsV~pG~~ 201 (281)
++.+.+.+.|.|+|-.-+... ....++...++ +.|+.+.. ..+-+.+.+.++.++. .++-|+.++-+|-.+
T Consensus 45 ~~~l~~l~p~fvsVT~gagg~~r~~t~~~a~~i~~~~g~~~v~Hltc~~~~~~~l~~~L~~~~~~GI~nILaLrGDpp~~ 124 (304)
T 3fst_A 45 IDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDRTGLEAAPHLTCIDATPDELRTIARDYWNNGIRHIVALRGDLPPG 124 (304)
T ss_dssp HHHHHTTCCSEEEECCCTTSSCHHHHHHHHHHHHHHHCCCEEEEEESTTSCHHHHHHHHHHHHHTTCCEEEEECCCCC--
T ss_pred HHHHhcCCCCEEEEeeCCCCcchhHHHHHHHHHHHHhCCCeeEEeecCCCCHHHHHHHHHHHHHCCCCEEEEecCCCCCC
Confidence 566777899998888665321 11223445555 47998887 3344556666666543 377888888776333
Q ss_pred C-CccchhHHHHHHHHHHHhhhcCCCCeEEEecC----C---Ch----hcHHHHHHcCCcEEEEcccccCCCCHHHHHHH
Q 023494 202 G-QSFIESQVKKISDLRRMCLEKGVNPWIEVDGG----V---GP----KNAYKVIEAGANALVAGSAVFGAKDYAEAIKG 269 (281)
Q Consensus 202 G-Q~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGG----I---~~----e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~ 269 (281)
+ ..| .+..+-++.+|++ .++.|.|.|= - +. +.+++=+++|||.+| =-.+|..+...+..++
T Consensus 125 ~~~~~-~~A~dLv~~ir~~-----~~f~IgvA~yPE~Hp~a~~~~~d~~~Lk~KvdAGAdf~i-TQ~ffD~~~~~~f~~~ 197 (304)
T 3fst_A 125 SGKPE-MYASDLVTLLKEV-----ADFDISVAAYPEVHPEAKSAQADLLNLKRKVDAGANRAI-TQFFFDVESYLRFRDR 197 (304)
T ss_dssp ----C-CCHHHHHHHHHHH-----CCCEEEEEECTTCCTTCSCHHHHHHHHHHHHHHTCCEEE-ECCCSCHHHHHHHHHH
T ss_pred CCCCC-CCHHHHHHHHHHc-----CCCeEEEEeCCCcCCCCCCHHHHHHHHHHHHHcCCCEEE-eCccCCHHHHHHHHHH
Confidence 3 234 4566677777665 1467777642 1 11 133333679999754 4455654444444444
Q ss_pred HHH
Q 023494 270 IKT 272 (281)
Q Consensus 270 l~~ 272 (281)
+++
T Consensus 198 ~r~ 200 (304)
T 3fst_A 198 CVS 200 (304)
T ss_dssp HHH
T ss_pred HHh
Confidence 443
No 455
>3e02_A Uncharacterized protein DUF849; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.90A {Burkholderia xenovorans LB400}
Probab=83.32 E-value=11 Score=34.30 Aligned_cols=194 Identities=15% Similarity=0.210 Sum_probs=107.5
Q ss_pred CHHHHHHHHHHcCCCeEEEEeee---CcccccccCCHHHHHHcCcCCCCCeeEEEEe-----cChhhHHHHHHHcCCCEE
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMD---GRFVPNITIGPLVVDALRPVTDLPLDVHLMI-----VEPEQRVPDFIKAGADIV 142 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImD---G~fvpn~~~G~~~I~~ir~~t~~~idaHLmv-----~dp~~~i~~~~~aGAd~I 142 (281)
.+.++...+.++|+..+|+-+-| |.=......--++++.||+.++ +.+.+-+ .+|+.-+..+.+...|..
T Consensus 33 Eia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~~d--~iI~~TTgg~~~~~~eerla~~~~~~Pe~a 110 (311)
T 3e02_A 33 EIVKEGVAAAEAGAAMLHLHARDPLNGRPSQDPDLFMRFLPQLKERTD--AILNITTGGGLGMSLDERLAPARAARPEVA 110 (311)
T ss_dssp HHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTTHHHHHHHCC--CEEEECSSCSTTCCHHHHHHHHHHHCCSEE
T ss_pred HHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHhCC--cEEEECCCCCCCCCHHHHHHHHHhcCCCee
Confidence 45555567778999999998877 5312222233456777887654 3333333 234444444445578888
Q ss_pred EEccccc---------------------------------ccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhcc--
Q 023494 143 SVHCEQS---------------------------------STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV-- 187 (281)
Q Consensus 143 tvh~Ea~---------------------------------~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~-- 187 (281)
++-.-.. +...+.++++.++++|+++-+.+-....+..+..+++.
T Consensus 111 Sln~gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~d~v~~n~~~~i~~~~~~~~e~Gi~pE~e~fd~g~l~~~~~l~~~Gl 190 (311)
T 3e02_A 111 SMNMGSLNFNISQAAAKFDTFKFDWERPYLAGTRDFILSNTFSQIERGMTELGASGTRFEFECYDVGHLYNLAHFVDRKL 190 (311)
T ss_dssp EEECSCEECBCGGGGGGCSCCSSTTHHHHHHHGGGCEECCCHHHHHHHHHHHHTTTCEEEEEECSHHHHHHHHHHHHTTS
T ss_pred eecCCCceeccccchhhccccccccchhhcccCCCceecCCHHHHHHHHHHHHHcCCeEEEEEEcHHHHHHHHHHHHcCC
Confidence 7652110 12258889999999999999988644455556555543
Q ss_pred ----CCEEEEEeecCCCCCCccchhHHHHHHHH-HHHhhhcCCCCeEEEecCCChh---cHHHHHHcCCcEEEEc--ccc
Q 023494 188 ----VDLVLIMSVNPGFGGQSFIESQVKKISDL-RRMCLEKGVNPWIEVDGGVGPK---NAYKVIEAGANALVAG--SAV 257 (281)
Q Consensus 188 ----vD~IlvmsV~pG~~GQ~f~~~~l~kI~~l-r~l~~~~~~~~~I~VDGGI~~e---~i~~~~~aGAD~~VvG--SaI 257 (281)
..+-++|++. +|++-.++.+.-+.+. .++++. +....| -|+... -....+..|-+ +=+| =.+
T Consensus 191 ~~~p~~~~~vlGv~---~g~~~~~~~L~~~~~~~~~~~~~---~~~wsv-~~~Gr~~~p~~~~A~~~GGh-vRVGlEDnl 262 (311)
T 3e02_A 191 VEPPFFLQCVFGIL---GGIGADPENLLHMRTIADRLFGQ---DYYLSV-LAAGRHQMPFVTMSAILGGN-VRVGLEDSL 262 (311)
T ss_dssp SCSCEEEEEEECCB---TSCCSCHHHHHHHHHHHHHHHTT---SEEEEE-EECGGGHHHHHHHHHHTTCE-EEESTTTCS
T ss_pred CCCCeEEEEEecCC---CCCCCCHHHHHHHHHHHHhhCCC---CCceEE-EeeChhhHHHHHHHHHcCCC-eEEccCcce
Confidence 2233445443 4566666665544322 244432 233333 233333 34456888887 5556 224
Q ss_pred cC-----CCCHHHHHHHHHHhc
Q 023494 258 FG-----AKDYAEAIKGIKTSK 274 (281)
Q Consensus 258 f~-----a~dp~~~~~~l~~~~ 274 (281)
+- +++-.+.++++.+.+
T Consensus 263 ~~~~G~lA~sNaelV~~~~~i~ 284 (311)
T 3e02_A 263 YSGKGQLATSNAEQVRKIRRII 284 (311)
T ss_dssp EEETTEECSCHHHHHHHHHHHH
T ss_pred ecCCCCCCCCHHHHHHHHHHHH
Confidence 42 234445555555543
No 456
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=83.23 E-value=9.4 Score=34.72 Aligned_cols=91 Identities=15% Similarity=0.211 Sum_probs=51.0
Q ss_pred HHHHHHHHcCCCeEEEEeeeCcccccc---------cCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEE-
Q 023494 74 EQVKAVELAGCDWIHVDVMDGRFVPNI---------TIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVS- 143 (281)
Q Consensus 74 ~~l~~l~~~G~d~iHiDImDG~fvpn~---------~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~It- 143 (281)
+..+.+.+.|+|+|-|... ..-|.. .-=..+|+.|++.++.|+-+ =+.+|. .++.+.++||++|-
T Consensus 37 ~~a~~~v~~GAdIIDIGge--STrPGa~~v~~~eE~~Rv~pvI~~l~~~~~vpiSI--DT~~~~-Va~aAl~aGa~iIND 111 (314)
T 2vef_A 37 QQARKLIAEGASMLDIGGE--STRPGSSYVEIEEEIQRVVPVIKAIRKESDVLISI--DTWKSQ-VAEAALAAGADLVND 111 (314)
T ss_dssp HHHHHHHHTTCSEEEEECC--C-----CHHHHHHHHHHHHHHHHHHHHHCCCEEEE--ECSCHH-HHHHHHHTTCCEEEE
T ss_pred HHHHHHHHCCCCEEEECCC--cCCCCCCCCCHHHHHHHHHHHHHHHHhhCCceEEE--eCCCHH-HHHHHHHcCCCEEEE
Confidence 3345566789998644311 111311 00123455566555555544 345654 67788899999984
Q ss_pred EcccccccccHHHHHHHHHHcCCcEEEEEC
Q 023494 144 VHCEQSSTIHLHRTLNQIKDLGAKAGVVLN 173 (281)
Q Consensus 144 vh~Ea~~~~~i~~~l~~ik~~G~k~Glai~ 173 (281)
+..+.. .+ +.+..++++|+.+.+.-+
T Consensus 112 Vsg~~~-d~---~m~~v~a~~~~~vvlmh~ 137 (314)
T 2vef_A 112 ITGLMG-DE---KMPHVVAEARAQVVIMFN 137 (314)
T ss_dssp TTTTCS-CT---THHHHHHHHTCEEEEECC
T ss_pred CCCCCC-Ch---HHHHHHHHcCCCEEEEec
Confidence 444421 12 456677889988777644
No 457
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=83.20 E-value=2.6 Score=38.65 Aligned_cols=110 Identities=18% Similarity=0.216 Sum_probs=71.7
Q ss_pred cChhhHHH---HHHHcCCCEEEEcccccccccHHHHHHHHHHc--CCcEEEEECCCCCHHHHHHhhcc-----CCEEEEE
Q 023494 125 VEPEQRVP---DFIKAGADIVSVHCEQSSTIHLHRTLNQIKDL--GAKAGVVLNPATSLSAIECVLDV-----VDLVLIM 194 (281)
Q Consensus 125 ~dp~~~i~---~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~--G~k~Glai~p~t~ie~~~~~l~~-----vD~Ilvm 194 (281)
.+|+.+.+ .+.+.|.+.+-+|.. +..++ +.++++|+. ++.+.+..|.....+. .++++. +++|
T Consensus 140 ~~~~~~~~~a~~~~~~G~~~iKik~~--~~~d~-~~v~avr~a~~~~~l~vDan~~~~~~~-~~~~~~l~~~~i~~i--- 212 (369)
T 2zc8_A 140 PSVEDTLRVVERHLEEGYRRIKLKIK--PGWDY-EVLKAVREAFPEATLTADANSAYSLAN-LAQLKRLDELRLDYI--- 212 (369)
T ss_dssp SSHHHHHHHHHHHHHTTCSCEEEECB--TTBSH-HHHHHHHHHCTTSCEEEECTTCCCGGG-HHHHHGGGGGCCSCE---
T ss_pred CCHHHHHHHHHHHHHhhhheeeeecC--hhHHH-HHHHHHHHHcCCCeEEEecCCCCCHHH-HHHHHHHHhCCCcEE---
Confidence 36766544 346789999998863 22333 456777764 6778888887766665 555443 2333
Q ss_pred eecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEE
Q 023494 195 SVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVA 253 (281)
Q Consensus 195 sV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~Vv 253 (281)
.|++.+..++-.+++++.. +++|+.|+.+. .+.+..+++.| +|++.+
T Consensus 213 -------EqP~~~~d~~~~~~l~~~~-----~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 261 (369)
T 2zc8_A 213 -------EQPLAYDDLLDHAKLQREL-----STPICLDESLTGAEKARKAIELGAGRVFNV 261 (369)
T ss_dssp -------ECCSCTTCSHHHHHHHHHC-----SSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred -------ECCCCcccHHHHHHHHhhC-----CCCEEEcCccCCHHHHHHHHHhCCCCEEEE
Confidence 2555555555566665542 47899999986 77888888777 788776
No 458
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=83.16 E-value=14 Score=34.12 Aligned_cols=172 Identities=13% Similarity=0.138 Sum_probs=97.8
Q ss_pred CccCHHHHHHHHHHcCCCeEEEEeeeCcccccc------cCCHHHHHHcCcC---CCCCeeEEEEecChhhHHHHHHHcC
Q 023494 68 NFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNI------TIGPLVVDALRPV---TDLPLDVHLMIVEPEQRVPDFIKAG 138 (281)
Q Consensus 68 D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~------~~G~~~I~~ir~~---t~~~idaHLmv~dp~~~i~~~~~aG 138 (281)
|.....+.++.+.++|++.+-. +.|-|.. .+|.+.++.+++. .++++.. -+.||. -++.+.+.
T Consensus 118 s~e~a~~~a~~~k~aGa~~vr~----q~fKprTs~~~f~glg~egl~~l~~~~~e~Gl~~~t--e~~d~~-~~~~l~~~- 189 (350)
T 1vr6_A 118 GREMLMETAHFLSELGVKVLRG----GAYKPRTSPYSFQGLGEKGLEYLREAADKYGMYVVT--EALGED-DLPKVAEY- 189 (350)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEC----BSCCCCCSTTSCCCCTHHHHHHHHHHHHHHTCEEEE--ECSSGG-GHHHHHHH-
T ss_pred CHHHHHHHHHHHHHcCCCeeee----eEEeCCCChHhhcCCCHHHHHHHHHHHHHcCCcEEE--EeCCHH-HHHHHHHh-
Confidence 4444556667778899987544 4555532 2355666666553 5677766 334544 34555666
Q ss_pred CCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhc------cCCEEEEE---eecCCCCCCccchhH
Q 023494 139 ADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD------VVDLVLIM---SVNPGFGGQSFIESQ 209 (281)
Q Consensus 139 Ad~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~------~vD~Ilvm---sV~pG~~GQ~f~~~~ 209 (281)
+|++-+.... ..+ ..+++++-+.|+-+++.-...-.++++..-++ .-++++.. +.+|++.-....
T Consensus 190 vd~lkIgAr~--~~n-~~LL~~va~~~kPVilk~G~~~tl~ei~~Ave~i~~~GN~~viLceRG~~typ~~~~~~vd--- 263 (350)
T 1vr6_A 190 ADIIQIGARN--AQN-FRLLSKAGSYNKPVLLKRGFMNTIEEFLLSAEYIANSGNTKIILCERGIRTFEKATRNTLD--- 263 (350)
T ss_dssp CSEEEECGGG--TTC-HHHHHHHHTTCSCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCC---
T ss_pred CCEEEECccc--ccC-HHHHHHHHccCCcEEEcCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcChhhhh---
Confidence 8999999874 233 34677777889999988877633433333222 13566531 123443222222
Q ss_pred HHHHHHHHHHhhhcCCCCeEEEec----CCC---hhcHHHHHHcCCcEEEEccccc
Q 023494 210 VKKISDLRRMCLEKGVNPWIEVDG----GVG---PKNAYKVIEAGANALVAGSAVF 258 (281)
Q Consensus 210 l~kI~~lr~l~~~~~~~~~I~VDG----GI~---~e~i~~~~~aGAD~~VvGSaIf 258 (281)
+.-|..+++.. +++|.+|- |-. ..-....+.+|||++++=+-+.
T Consensus 264 l~ai~~lk~~~-----~lpVi~dssHs~G~~~~v~~~a~AAvA~GA~Gl~IE~H~~ 314 (350)
T 1vr6_A 264 ISAVPIIRKES-----HLPILVDPSHSGGRRDLVIPLSRAAIAVGAHGIIVEVHPE 314 (350)
T ss_dssp TTHHHHHHHHB-----SSCEEECHHHHHCSGGGHHHHHHHHHHHTCSEEEEEBCSC
T ss_pred HHHHHHHHHhh-----CCCEEEeCCCCCcccchHHHHHHHHHHhCCCEEEEEecCC
Confidence 33344555542 35665643 322 2333445788999999987764
No 459
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=83.12 E-value=13 Score=33.58 Aligned_cols=174 Identities=17% Similarity=0.081 Sum_probs=96.3
Q ss_pred ccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCH----HHHHHcCcC--CCCCeeEEEEecChhh---HHHHHHH
Q 023494 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGP----LVVDALRPV--TDLPLDVHLMIVEPEQ---RVPDFIK 136 (281)
Q Consensus 66 a~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~----~~I~~ir~~--t~~~idaHLmv~dp~~---~i~~~~~ 136 (281)
..|+..+++.++.+.+.|++-+- .-|+.--..++.. ++++...+. -..|+.++.- .+..+ +.+.+.+
T Consensus 29 ~iD~~~l~~lv~~li~~Gv~Gl~---v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg-~~t~~ai~la~~A~~ 104 (316)
T 3e96_A 29 SIDWHHYKETVDRIVDNGIDVIV---PCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIG-YATSTAIELGNAAKA 104 (316)
T ss_dssp CBCHHHHHHHHHHHHTTTCCEEC---TTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC-SSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEE---eCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeC-cCHHHHHHHHHHHHh
Confidence 46778888999999999998652 2232222223333 344444443 2478999875 35543 4556778
Q ss_pred cCCCEEEEccc--c-cccccHHHHHHHHHH-cCCcEEEE-ECCCCCHHHHHHhhccCCEEEEEeecCCCCCCccchhHHH
Q 023494 137 AGADIVSVHCE--Q-SSTIHLHRTLNQIKD-LGAKAGVV-LNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVK 211 (281)
Q Consensus 137 aGAd~Itvh~E--a-~~~~~i~~~l~~ik~-~G~k~Gla-i~p~t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~~~~l~ 211 (281)
+|||.+.+..= . .+.+.+.+..+.+-+ .++.+.+= ..++-+.+.+.++.+...++.+= +. .| .+.
T Consensus 105 ~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~g~~l~~~~~~~La~~pnIvgiK--ds--sg------d~~ 174 (316)
T 3e96_A 105 AGADAVMIHMPIHPYVTAGGVYAYFRDIIEALDFPSLVYFKDPEISDRVLVDLAPLQNLVGVK--YA--IN------DLP 174 (316)
T ss_dssp HTCSEEEECCCCCSCCCHHHHHHHHHHHHHHHTSCEEEEECCTTSCTHHHHHHTTCTTEEEEE--EC--CC------CHH
T ss_pred cCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHcCCCEEEEE--eC--CC------CHH
Confidence 99999988521 1 012234444444433 36655553 24455667788877544444331 11 11 234
Q ss_pred HHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEccc
Q 023494 212 KISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSA 256 (281)
Q Consensus 212 kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSa 256 (281)
++.++++..+.. ++. .|=.|-....+..+...|++.+|.|.+
T Consensus 175 ~~~~~~~~~~~~--~f~-~v~~G~d~~~~~~~l~~G~~G~is~~a 216 (316)
T 3e96_A 175 RFAKVVRSIPEE--HQI-AWICGTAEKWAPFFWHAGAKGFTSGLV 216 (316)
T ss_dssp HHHHHHTTSCGG--GCC-EEEETTCTTTHHHHHHHTCCEEEESGG
T ss_pred HHHHHHHhcCCC--Cce-EEEeCChHHHHHHHHHCCCCEEEechh
Confidence 455544432210 232 033454444566677899999999965
No 460
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=83.10 E-value=6.2 Score=36.47 Aligned_cols=122 Identities=12% Similarity=0.063 Sum_probs=70.5
Q ss_pred CHHHHHHHHHHcCCCeEEEEeeeCccc-----cc---------------ccCCHHHHHHcCcCCC-CCeeEEEEecC---
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMDGRFV-----PN---------------ITIGPLVVDALRPVTD-LPLDVHLMIVE--- 126 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImDG~fv-----pn---------------~~~G~~~I~~ir~~t~-~~idaHLmv~d--- 126 (281)
++.++.+.+.++|.|.|||..--|-.+ |+ ..|-.++++++|+..+ .++-+.|=..+
T Consensus 162 ~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~ 241 (365)
T 2gou_A 162 DYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLN 241 (365)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTT
T ss_pred HHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccC
Confidence 444555667889999998865433211 32 1133466888887632 26766554322
Q ss_pred ------h----hhHHHHHHHcCCCEEEEccccc--ccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhcc--CCEEE
Q 023494 127 ------P----EQRVPDFIKAGADIVSVHCEQS--STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV--VDLVL 192 (281)
Q Consensus 127 ------p----~~~i~~~~~aGAd~Itvh~Ea~--~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~--vD~Il 192 (281)
+ .++++.+.++|+|++++|.-.. ......+.++.+|+.=...-++.. .-..+..++++.. +|.|.
T Consensus 242 ~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~G-gi~~~~a~~~l~~g~aD~V~ 320 (365)
T 2gou_A 242 GTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREAYQGVLIYAG-RYNAEKAEQAINDGLADMIG 320 (365)
T ss_dssp SCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEEES-SCCHHHHHHHHHTTSCSEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHHHCCCcEEEeC-CCCHHHHHHHHHCCCcceeh
Confidence 1 1235667789999999996310 011123566777765222333332 3346777777763 89987
Q ss_pred E
Q 023494 193 I 193 (281)
Q Consensus 193 v 193 (281)
+
T Consensus 321 i 321 (365)
T 2gou_A 321 F 321 (365)
T ss_dssp C
T ss_pred h
Confidence 5
No 461
>2f7f_A Nicotinate phosphoribosyltransferase, putative; structural genomics, PSI; 2.00A {Enterococcus faecalis} SCOP: c.1.17.1 d.41.2.1
Probab=83.07 E-value=1.2 Score=43.27 Aligned_cols=46 Identities=13% Similarity=0.115 Sum_probs=36.1
Q ss_pred HHHHHHhhhcCC-CCeEEEecCCChhcHHHHHHcCCcEEEEc--ccccC
Q 023494 214 SDLRRMCLEKGV-NPWIEVDGGVGPKNAYKVIEAGANALVAG--SAVFG 259 (281)
Q Consensus 214 ~~lr~l~~~~~~-~~~I~VDGGI~~e~i~~~~~aGAD~~VvG--SaIf~ 259 (281)
+++++++++.|. +..|++.|||+++++..+.+.|+|+++.| ++|+.
T Consensus 273 ~~~r~~ld~~G~~~~kI~aSggld~~~i~~l~~~G~~~~sfGvGT~Lt~ 321 (494)
T 2f7f_A 273 KRVREQLDEAGFTEAKIYASNDLDENTILNLKMQKSKIDVWGVGTKLIT 321 (494)
T ss_dssp HHHHHHHHHTTCTTCEEEECSSCCHHHHHHHHHTTCCCCEEEECHHHHT
T ss_pred HHHHHHHHhCCCCceEEEEECCCCHHHHHHHHHcCCCEEEEecCccccc
Confidence 566666655442 46899999999999999999999877777 56765
No 462
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=83.01 E-value=4.4 Score=34.84 Aligned_cols=92 Identities=14% Similarity=0.089 Sum_probs=62.2
Q ss_pred ccCCHHHHHHcCcC-CCCCeeEEEEecChhhHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCH
Q 023494 100 ITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSL 178 (281)
Q Consensus 100 ~~~G~~~I~~ir~~-t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~i 178 (281)
.+|.++.++.+|+. ++.++-. +.-..|..+.+.+.+.|++.++++.... + .+.++.+++.|+++.+.. .+ ..
T Consensus 146 ~Sf~~~~l~~~~~~~p~~~~~~-l~~~~~~~~~~~~~~~~~~~i~~~~~~~---~-~~~v~~~~~~G~~v~~wT-vn-~~ 218 (247)
T 2otd_A 146 SSFEIDALEAAQQAAPELPRGL-LLDEWRDDWRELTARLGCVSIHLNHKLL---D-KARVMQLKDAGLRILVYT-VN-KP 218 (247)
T ss_dssp EESCHHHHHHHHHHCTTSCEEE-EESSCCTTHHHHHHHHTCSEEEEEGGGC---C-HHHHHHHHHTTCEEEEEC-CC-CH
T ss_pred EcCCHHHHHHHHHHCCCCCEEE-EecCCcccHHHHHHHcCCeEEecChHhC---C-HHHHHHHHHCCCEEEEEc-cC-CH
Confidence 37889999999885 5555432 2223445555667788999999887642 2 468899999999998754 23 34
Q ss_pred HHHHHhhcc-CCEEEEEeecCCC
Q 023494 179 SAIECVLDV-VDLVLIMSVNPGF 200 (281)
Q Consensus 179 e~~~~~l~~-vD~IlvmsV~pG~ 200 (281)
+.++.+++. +|.| +|=+|..
T Consensus 219 ~~~~~l~~~GvdgI--~TD~p~~ 239 (247)
T 2otd_A 219 QHAAELLRWGVDCI--CTDAIDV 239 (247)
T ss_dssp HHHHHHHHHTCSEE--EESCTTT
T ss_pred HHHHHHHHcCCCEE--EeCCHHH
Confidence 556666654 8876 3666654
No 463
>3i10_A Putative glycerophosphoryl diester phosphodiester; NP_812074.1; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482}
Probab=83.00 E-value=7.4 Score=34.62 Aligned_cols=184 Identities=13% Similarity=0.122 Sum_probs=0.0
Q ss_pred ccCHHHHHHHHHHcCCCeEEEEe---eeCccccc---------------ccCCHHHHHHcCcCCCCCeeEEEEecChhhH
Q 023494 69 FAKLGEQVKAVELAGCDWIHVDV---MDGRFVPN---------------ITIGPLVVDALRPVTDLPLDVHLMIVEPEQR 130 (281)
Q Consensus 69 ~~~l~~~l~~l~~~G~d~iHiDI---mDG~fvpn---------------~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~ 130 (281)
+-|...+++.+.+.|+|++++|| .||..|-. -.+-...++.++-..... -....+.--
T Consensus 31 pENTl~af~~A~~~g~d~iE~Dv~~TkDg~~vv~HD~~l~r~t~~~g~v~~~t~~el~~l~~~~~~~----~~~~~~ipt 106 (278)
T 3i10_A 31 PENSTAAIDSAIAMKVDIVEIDIQKTKDGQLILMHDNTLDRTTTGKGEIKNWTLADIKKLKLKDKDG----KVTNYVVPT 106 (278)
T ss_dssp CTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSBSTTTBSCCSBGGGSCHHHHTTSCBBCTTS----CBCSCCCCB
T ss_pred CccHHHHHHHHHHcCCCEEEEEEEECCCCeEEEecCcchhhcCCCCceeecCcHHHHhcCCCCCCCc----ccCCCCCCC
Q ss_pred HHHHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhcc-CCEEEEEe--------------
Q 023494 131 VPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV-VDLVLIMS-------------- 195 (281)
Q Consensus 131 i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~-vD~Ilvms-------------- 195 (281)
++.+++.-...+.+..|. .......+++.++++|+.--+.+.-..+++.++++.+. ..-+++|.
T Consensus 107 L~evl~~~~~~~~~nie~-~~~~~~~v~~~l~~~~~~~~v~i~s~~~l~~~~~~~p~~~~~~l~~p~i~~~~~~~~~~i~ 185 (278)
T 3i10_A 107 LEEALLTAKGKIMVNLDK-AYDIFDDVYAILEKTETQNQVIMKGGQPIETVKREFGSYLDKVLYMPVIDLGNKEAEKIIT 185 (278)
T ss_dssp HHHHHHHHTTTSEEEEES-CGGGHHHHHHHHHHHTCGGGEEEEESSCHHHHHHHHGGGTTTSEEEEEEETTSTTHHHHHH
T ss_pred HHHHHHHhcCCeEEEEec-CchHHHHHHHHHHHcCCCCeEEEEEhHHHHHHHHHCcCCccceEEEeeecccccchHHHHH
Q ss_pred ----------ecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEE-------ecC------C-Chhc-HHHHHHc-CCc
Q 023494 196 ----------VNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEV-------DGG------V-GPKN-AYKVIEA-GAN 249 (281)
Q Consensus 196 ----------V~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~V-------DGG------I-~~e~-i~~~~~a-GAD 249 (281)
+++-+.. ..+...+.++++++. +.++.+ .|| + +++. +..+++. |+|
T Consensus 186 ~~~~~~~p~~~~~~~~~--~~~~~~~~v~~~~~~------g~~v~~nTlw~~~~~g~~d~~a~~d~~~~~~~l~~~~Gvd 257 (278)
T 3i10_A 186 DYLKELRPAAFEIIYSD--PKNPLPPKIKQLLFK------KSLIWYNTLWGSLAGNHDDNLALTDPEKSYGYLIEQLGAR 257 (278)
T ss_dssp HHHHHTCCSEEEEEBCC--TTCSSHHHHHHHHTT------TSEEEEECSSGGGBTTCCHHHHHHCHHHHHHHHHHTTCEE
T ss_pred HHHHhcCceEEEEeecC--CccchHHHHHHHHHC------CCEEEEEecccccccCccchhhccChHHHHHHHHhcCCCC
Q ss_pred EEEEcccccCCCCHHHHHHHHHH
Q 023494 250 ALVAGSAVFGAKDYAEAIKGIKT 272 (281)
Q Consensus 250 ~~VvGSaIf~a~dp~~~~~~l~~ 272 (281)
++. .+.|....+-+++
T Consensus 258 ~I~-------TD~P~~l~~yL~~ 273 (278)
T 3i10_A 258 ILQ-------TDQPAYLLDYLRK 273 (278)
T ss_dssp EEE-------ESCHHHHHHHHHH
T ss_pred EEE-------eCCHHHHHHHHhh
No 464
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=82.94 E-value=9.3 Score=34.14 Aligned_cols=193 Identities=15% Similarity=0.125 Sum_probs=108.5
Q ss_pred CHHHHHHHHHHcCCCeEEEEeee--CcccccccCCHHHHHHcCcC-CCCCeeEEEEe----cChhhHHHHHHHcCCCEEE
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMD--GRFVPNITIGPLVVDALRPV-TDLPLDVHLMI----VEPEQRVPDFIKAGADIVS 143 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImD--G~fvpn~~~G~~~I~~ir~~-t~~~idaHLmv----~dp~~~i~~~~~aGAd~It 143 (281)
.+.++...+.++|+..+|+-+-| |.=+.....--++++.||+. ++..+.+ =+ .++++. ....+...|..+
T Consensus 31 Eia~~A~~~~~AGAaivHlHvRd~~G~~s~d~~~~~e~~~~IR~~~pd~ii~~--Ttg~~~~~~e~R-~~~~~~~Pe~aS 107 (275)
T 3no5_A 31 EQVESTQAAFEAGATLVHLHVRNDDETPTSNPDRFALVLEGIRKHAPGMITQV--STGGRSGAGNER-GAMLSLRPDMAS 107 (275)
T ss_dssp HHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCEEEE--CCCCCTTCCGGG-GTTGGGCCSEEE
T ss_pred HHHHHHHHHHHccCcEEEEeecCCCCCcCCCHHHHHHHHHHHHHhCCCeEEEe--CCCCCCCCHHHH-hhHhhcCCCEEE
Confidence 55566667788999999998887 53222233445778888875 3544332 22 122222 222456788888
Q ss_pred Eccccc---------ccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhcc------CCEEEEEeecCCCCCCccchh
Q 023494 144 VHCEQS---------STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV------VDLVLIMSVNPGFGGQSFIES 208 (281)
Q Consensus 144 vh~Ea~---------~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~------vD~IlvmsV~pG~~GQ~f~~~ 208 (281)
+-.-+. +.+.+.++++.++++|+++-+.+.....+..+..+++. ..+-++|++ + +|++-.++
T Consensus 108 l~~gs~Nf~~~v~~N~~~~~~~~~~~~~e~Gi~pE~e~fd~g~l~~~~~l~~~Gl~~~p~~~~~vlGv-~--~g~~~~~~ 184 (275)
T 3no5_A 108 LATGSVNFPTRVYDNPPELVDWLAAEMKTYGIKPEVEAFDLSMIFQAAAMQAAGAIVGPLHIQFVMGI-K--NAMPVDRE 184 (275)
T ss_dssp EECSCEECSSSEECCCHHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHHHTSSCSSCEEEEEECC-T--TSCCCCHH
T ss_pred ecCcccccccccccCCHHHHHHHHHHHHHcCCeeEEEEEcHHHHHHHHHHHHCCCCCCCeeEEEEeCC-C--CCCCCCHH
Confidence 442210 12458889999999999999988755555655555542 233445655 2 36666666
Q ss_pred HHHHHHHHHHHhhhcCCCCeEEEecCCChh---cHHHHHHcCCcEEEEc--ccccC-----CCCHHHHHHHHHHhc
Q 023494 209 QVKKISDLRRMCLEKGVNPWIEVDGGVGPK---NAYKVIEAGANALVAG--SAVFG-----AKDYAEAIKGIKTSK 274 (281)
Q Consensus 209 ~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e---~i~~~~~aGAD~~VvG--SaIf~-----a~dp~~~~~~l~~~~ 274 (281)
.+.-+.+.-+.++. +....| -|+... -....+..|-+ +=+| =.++- +++-.+.++++.+.+
T Consensus 185 ~l~~~~~~l~~~~~---~~~w~v-~g~Gr~~~p~~~~A~~~GGh-vRVGlEDnl~~~~G~~A~sNa~lV~~~~~i~ 255 (275)
T 3no5_A 185 VLEFYVQTLKRLSP---DATWTG-AGIGRHQLTMARWSLELGGH-CRTGLEDNVRLDKNTLAPSNAALVRQVAELC 255 (275)
T ss_dssp HHHHHHHHHHHHCT---TCEEEE-EECGGGHHHHHHHHHHHTCE-EEESTTTCCBSSSSCBCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCC---CCeEEE-EecCHhhHHHHHHHHHhCCC-eEEcCCcceeCCCCCCCCCHHHHHHHHHHHH
Confidence 65443222111232 344433 344433 34455788988 5667 33552 234445555555543
No 465
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=82.79 E-value=3.7 Score=37.94 Aligned_cols=112 Identities=8% Similarity=0.064 Sum_probs=73.4
Q ss_pred hhHHH---HHHHcCCCEEEEccccc--ccccHHHHHHHHHHc---CCcEEEEECCCCC-HHHHHHhhcc-----CCEEEE
Q 023494 128 EQRVP---DFIKAGADIVSVHCEQS--STIHLHRTLNQIKDL---GAKAGVVLNPATS-LSAIECVLDV-----VDLVLI 193 (281)
Q Consensus 128 ~~~i~---~~~~aGAd~Itvh~Ea~--~~~~i~~~l~~ik~~---G~k~Glai~p~t~-ie~~~~~l~~-----vD~Ilv 193 (281)
+.+.+ .+.+.|.+.+=++.-.. +.+.-.+.++++|+. ++.+.+..|.... .+....+++. +++|
T Consensus 148 e~~~~~a~~~~~~Gf~~iKlk~g~~g~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~d~~~A~~~~~~l~~~~i~~i-- 225 (374)
T 3sjn_A 148 EDNVAIVQGLKDQGFSSIKFGGGVMGDDPDTDYAIVKAVREAAGPEMEVQIDLASKWHTCGHSAMMAKRLEEFNLNWI-- 225 (374)
T ss_dssp GGGHHHHHHHHTTTCSEEEEECTTTTSCHHHHHHHHHHHHHHHCSSSEEEEECTTTTCSHHHHHHHHHHSGGGCCSEE--
T ss_pred HHHHHHHHHHHHcCCCEEEeccCCCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCHHHHHHHHHHhhhcCceEE--
Confidence 66544 45678999999996410 123344667777775 4567778888877 7665555432 3444
Q ss_pred EeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHc-CCcEEEEc
Q 023494 194 MSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEA-GANALVAG 254 (281)
Q Consensus 194 msV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~a-GAD~~VvG 254 (281)
.|++.+..++-++++++.. +++|..|+.+. ++.+..+++. .+|++.+-
T Consensus 226 --------EqP~~~~~~~~~~~l~~~~-----~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k 275 (374)
T 3sjn_A 226 --------EEPVLADSLISYEKLSRQV-----SQKIAGGESLTTRYEFQEFITKSNADIVQPD 275 (374)
T ss_dssp --------ECSSCTTCHHHHHHHHHHC-----SSEEEECTTCCHHHHHHHHHHHHCCSEECCB
T ss_pred --------ECCCCcccHHHHHHHHhhC-----CCCEEeCCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 2555555566666666643 47999999998 6778877765 57877654
No 466
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=82.79 E-value=4.5 Score=35.52 Aligned_cols=146 Identities=12% Similarity=0.091 Sum_probs=74.6
Q ss_pred CCeeEEEEecChh-----hHHHHHHHcCCCEEEEcccccc----ccc-----------------HHHHHHHHHHc--CCc
Q 023494 116 LPLDVHLMIVEPE-----QRVPDFIKAGADIVSVHCEQSS----TIH-----------------LHRTLNQIKDL--GAK 167 (281)
Q Consensus 116 ~~idaHLmv~dp~-----~~i~~~~~aGAd~Itvh~Ea~~----~~~-----------------i~~~l~~ik~~--G~k 167 (281)
..+..+++.-+|. ++++.+.++|+|.|-+..-..+ .+. ..+.++.+|+. ++.
T Consensus 17 ~~~i~~i~~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~P 96 (262)
T 2ekc_A 17 KALVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIP 96 (262)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSC
T ss_pred ceEEEEecCCCCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCC
Confidence 4577777777775 2456678899999999753210 012 23557777776 666
Q ss_pred EEEEECCCCCH-----HH-HHHhhc-cCCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcH
Q 023494 168 AGVVLNPATSL-----SA-IECVLD-VVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNA 240 (281)
Q Consensus 168 ~Glai~p~t~i-----e~-~~~~l~-~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i 240 (281)
+++....+ ++ +. ++.... .+|.+++ |... ++.+.++.+...+++.....-+...-+.+.+
T Consensus 97 i~~m~y~n-~v~~~g~~~f~~~~~~aG~dgvii----~dl~--------~ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl 163 (262)
T 2ekc_A 97 FLLMTYYN-PIFRIGLEKFCRLSREKGIDGFIV----PDLP--------PEEAEELKAVMKKYVLSFVPLGAPTSTRKRI 163 (262)
T ss_dssp EEEECCHH-HHHHHCHHHHHHHHHHTTCCEEEC----TTCC--------HHHHHHHHHHHHHTTCEECCEECTTCCHHHH
T ss_pred EEEEecCc-HHHHhhHHHHHHHHHHcCCCEEEE----CCCC--------HHHHHHHHHHHHHcCCcEEEEeCCCCCHHHH
Confidence 66631111 22 11 122222 3676654 2211 2456666666666554321223344445677
Q ss_pred HHHHHcCCcEEEEcc--cccCCCC------HHHHHHHHHHhc
Q 023494 241 YKVIEAGANALVAGS--AVFGAKD------YAEAIKGIKTSK 274 (281)
Q Consensus 241 ~~~~~aGAD~~VvGS--aIf~a~d------p~~~~~~l~~~~ 274 (281)
..+.+.+...+...| ..++... ..+.++++++..
T Consensus 164 ~~ia~~a~gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~ 205 (262)
T 2ekc_A 164 KLICEAADEMTYFVSVTGTTGAREKLPYERIKKKVEEYRELC 205 (262)
T ss_dssp HHHHHHCSSCEEEESSCC---------CHHHHHHHHHHHHHC
T ss_pred HHHHHhCCCCEEEEecCCccCCCCCcCcccHHHHHHHHHhhc
Confidence 777777655543322 2443322 235666777654
No 467
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=82.66 E-value=2.5 Score=38.44 Aligned_cols=153 Identities=15% Similarity=0.159 Sum_probs=0.0
Q ss_pred HHHHHHcCcCCCCCeeEEEEec-----ChhhHHHHHHHcCCCEEEEcccc-------------cccccHHHHHHHHHHcC
Q 023494 104 PLVVDALRPVTDLPLDVHLMIV-----EPEQRVPDFIKAGADIVSVHCEQ-------------SSTIHLHRTLNQIKDLG 165 (281)
Q Consensus 104 ~~~I~~ir~~t~~~idaHLmv~-----dp~~~i~~~~~aGAd~Itvh~Ea-------------~~~~~i~~~l~~ik~~G 165 (281)
...++.|.+.++.|+.+|+=.- +..+-+..+.++|+..|.+-.-. .+.++..+-|+++++.|
T Consensus 78 ~~~~~~I~r~~~~pviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~ 157 (305)
T 3ih1_A 78 AERARDLVRATDLPVLVDIDTGFGGVLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVA 157 (305)
T ss_dssp HHHHHHHHHHHCCCEEEECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCHHHHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcC
Q ss_pred CcEEEEECCC--------CCHHHHHHhhcc-CCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEE---Eec
Q 023494 166 AKAGVVLNPA--------TSLSAIECVLDV-VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIE---VDG 233 (281)
Q Consensus 166 ~k~Glai~p~--------t~ie~~~~~l~~-vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~---VDG 233 (281)
...-|.-..+ .-+++.+.|.+. +|.|.+ --....+.++++.+.++ .++. +.|
T Consensus 158 ~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~-----------e~~~~~~~~~~i~~~~~-----~P~~~n~~~~ 221 (305)
T 3ih1_A 158 PSLYIVARTDARGVEGLDEAIERANAYVKAGADAIFP-----------EALQSEEEFRLFNSKVN-----APLLANMTEF 221 (305)
T ss_dssp TTSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEE-----------TTCCSHHHHHHHHHHSC-----SCBEEECCTT
T ss_pred CCeEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEE-----------cCCCCHHHHHHHHHHcC-----CCEEEeecCC
Q ss_pred CCChh-cHHHHHHcCCcEEEEcccccCC--CCHHHHHHHHHH
Q 023494 234 GVGPK-NAYKVIEAGANALVAGSAVFGA--KDYAEAIKGIKT 272 (281)
Q Consensus 234 GI~~e-~i~~~~~aGAD~~VvGSaIf~a--~dp~~~~~~l~~ 272 (281)
|-++. +..++.+.|+..++.|...+.+ ....+.++.|++
T Consensus 222 g~tp~~~~~eL~~lGv~~v~~~~~~~raa~~a~~~~~~~i~~ 263 (305)
T 3ih1_A 222 GKTPYYSAEEFANMGFQMVIYPVTSLRVAAKAYENVFTLIKE 263 (305)
T ss_dssp SSSCCCCHHHHHHTTCSEEEECSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHcCCCEEEEchHHHHHHHHHHHHHHHHHHh
No 468
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=82.63 E-value=5.2 Score=35.77 Aligned_cols=185 Identities=11% Similarity=0.096 Sum_probs=95.8
Q ss_pred ceEeEEEecc-CccCHHHHHHHHHHcCCCeEEEE-eeeCcccc--c-----c-----cCCHHHHHHcCcCCCCCeeEEEE
Q 023494 58 IIVSPSILSA-NFAKLGEQVKAVELAGCDWIHVD-VMDGRFVP--N-----I-----TIGPLVVDALRPVTDLPLDVHLM 123 (281)
Q Consensus 58 ~~i~pSila~-D~~~l~~~l~~l~~~G~d~iHiD-ImDG~fvp--n-----~-----~~G~~~I~~ir~~t~~~idaHLm 123 (281)
+.+.++..+. |.....+..+++.+.|++.. +. +|-..|-. . + ..|.+..+++++..++++....
T Consensus 16 ~~vIAGpc~~~~~e~a~~~a~~lk~~ga~~~-~~~v~k~~f~k~prts~~~~~g~~l~~gl~~l~~~~~~~Gl~~~te~- 93 (280)
T 2qkf_A 16 FVLFGGINVLESLDSTLQTCAHYVEVTRKLG-IPYIFKASFDKANRSSIHSYRGVGLEEGLKIFEKVKAEFGIPVITDV- 93 (280)
T ss_dssp CEEEEEEEECCCHHHHHHHHHHHHHHHHHHT-CCEEEEEESCCSSCSSSSSCCCSCHHHHHHHHHHHHHHHCCCEEEEC-
T ss_pred eEEEEecCCCCCHHHHHHHHHHHHHhhhhcc-eeEEEeeeeecCCCCChHHhhccchHHHHHHHHHHHHHcCCcEEEec-
Confidence 3333355444 44344455566666654443 33 44433332 1 1 2234444444444567776633
Q ss_pred ecChhhHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCC-CCHHH--HHHhhc---cCCEEEEEeec
Q 023494 124 IVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPA-TSLSA--IECVLD---VVDLVLIMSVN 197 (281)
Q Consensus 124 v~dp~~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~-t~ie~--~~~~l~---~vD~IlvmsV~ 197 (281)
.||. -++.+.+. +|++-+.... ..+. ++++++-+.|+-+++.-... |.-+. ..+++. .-+.+++.+.-
T Consensus 94 -~d~~-~~~~l~~~-~d~~kIga~~--~~n~-~ll~~~a~~~kPV~lk~G~~~t~~e~~~A~~~i~~~Gn~~i~L~~rg~ 167 (280)
T 2qkf_A 94 -HEPH-QCQPVAEV-CDVIQLPAFL--ARQT-DLVVAMAKTGNVVNIKKPQFLSPSQMKNIVEKFHEAGNGKLILCERGS 167 (280)
T ss_dssp -CSGG-GHHHHHHH-CSEEEECGGG--TTBH-HHHHHHHHTCCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCE
T ss_pred -CCHH-HHHHHHhh-CCEEEECccc--ccCH-HHHHHHHcCCCcEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 4544 34445566 8999999753 2333 37888878899999887765 43332 222222 13566654321
Q ss_pred CCCCCCccch--hHHHHHHHHHHHhhhcCCCCeEEEe---------------cCCC---hhcHHHHHHcCCcEEEEcccc
Q 023494 198 PGFGGQSFIE--SQVKKISDLRRMCLEKGVNPWIEVD---------------GGVG---PKNAYKVIEAGANALVAGSAV 257 (281)
Q Consensus 198 pG~~GQ~f~~--~~l~kI~~lr~l~~~~~~~~~I~VD---------------GGI~---~e~i~~~~~aGAD~~VvGSaI 257 (281)
.+ ++.. ..+.-|..+++... +++|.+| +|-. .......+..|||.+++=+-+
T Consensus 168 -~~---~~~~~~~dl~~i~~lk~~~~----~~pV~~D~sH~~q~~~~~~~~s~g~~~~~~~~a~aava~Ga~G~~IE~H~ 239 (280)
T 2qkf_A 168 -SF---GYDNLVVDMLGFGVMKQTCG----NLPVIFDVTHSLQTRDAGSAASGGRRAQALDLALAGMATRLAGLFLESHP 239 (280)
T ss_dssp -EC---STTCEECCTTHHHHHHHHTT----TCCEEEEHHHHCC----------CHHHHHHHHHHHHHTTCCSEEEEEC--
T ss_pred -CC---CCCccccCHHHHHHHHHhCC----CCCEEEECCCCccccCccccccCCchhhHHHHHHHHHHcCCCEEEEeecC
Confidence 12 1211 12334445555431 3689998 5511 233456678999999988876
Q ss_pred c
Q 023494 258 F 258 (281)
Q Consensus 258 f 258 (281)
.
T Consensus 240 ~ 240 (280)
T 2qkf_A 240 D 240 (280)
T ss_dssp -
T ss_pred C
Confidence 5
No 469
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=82.62 E-value=8.1 Score=33.02 Aligned_cols=119 Identities=11% Similarity=0.069 Sum_probs=65.0
Q ss_pred CHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcC---CCCC---eeEEEE----ec--Chh----------
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV---TDLP---LDVHLM----IV--EPE---------- 128 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~---t~~~---idaHLm----v~--dp~---------- 128 (281)
.+++.++.+.+.|.+.+++-.-+.++.....+....++++|+. .++. +.+|.- .. ||.
T Consensus 13 ~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~h~~~~~~~~~~~~~~r~~~~~~~~ 92 (287)
T 2x7v_A 13 GFDRVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHGIDWENAFCHSGYLINLASPKDDIWQKSVELLK 92 (287)
T ss_dssp CGGGHHHHHHHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHHTCCGGGEEEECCTTCCTTCSSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHHcCCCcceeEEecccccccCCCCHHHHHHHHHHHH
Confidence 6788899999999999988422211111112334455555442 4555 556631 11 332
Q ss_pred hHHHHHHHcCCCEEEEcccccc----cccHHHHHHHHHH-----cCCcEEEEECCC------CCHHHHHHhhccCC
Q 023494 129 QRVPDFIKAGADIVSVHCEQSS----TIHLHRTLNQIKD-----LGAKAGVVLNPA------TSLSAIECVLDVVD 189 (281)
Q Consensus 129 ~~i~~~~~aGAd~Itvh~Ea~~----~~~i~~~l~~ik~-----~G~k~Glai~p~------t~ie~~~~~l~~vD 189 (281)
+.++.+.+.|+..|.+|.-... .+....+++.+++ .|+++++--.+. ...+.+..+++.++
T Consensus 93 ~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~l~~l~~~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~~~~ 168 (287)
T 2x7v_A 93 KEVEICRKLGIRYLNIHPGSHLGTGEEEGIDRIVRGLNEVLNNTEGVVILLENVSQKGGNIGYKLEQLKKIRDLVD 168 (287)
T ss_dssp HHHHHHHHHTCCEEEECCEECTTSCHHHHHHHHHHHHHHHHTTCCSCEEEEECCCCCTTEECSSHHHHHHHHHHCS
T ss_pred HHHHHHHHcCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHcccCCCEEEEeCCCCCCCccCCCHHHHHHHHHhcC
Confidence 2355567889999999843210 1112233333332 577777765433 25566777777664
No 470
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=82.54 E-value=22 Score=32.07 Aligned_cols=137 Identities=14% Similarity=0.106 Sum_probs=80.0
Q ss_pred HHHHHHcCCCEEEEcccccc--cccHHHHHHHHHHcCCcEEEE-ECCCCCHHHHHHhhc-----cCCEEEEEeecCCCC-
Q 023494 131 VPDFIKAGADIVSVHCEQSS--TIHLHRTLNQIKDLGAKAGVV-LNPATSLSAIECVLD-----VVDLVLIMSVNPGFG- 201 (281)
Q Consensus 131 i~~~~~aGAd~Itvh~Ea~~--~~~i~~~l~~ik~~G~k~Gla-i~p~t~ie~~~~~l~-----~vD~IlvmsV~pG~~- 201 (281)
++.+...++|.|+|-.-+.. .....++...+++.|+.+..= .+-+.+.+.++.++. .++-|+.++-+|-.+
T Consensus 35 ~~~L~~~~pd~vsVT~~~~g~~r~~t~~~a~~i~~~g~~~i~Hltc~~~~~~~l~~~L~~~~~~GI~niLaLrGD~p~~~ 114 (310)
T 3apt_A 35 LEELKAFRPAFVSITYGAMGSTRERSVAWAQRIQSLGLNPLAHLTVAGQSRKEVAEVLHRFVESGVENLLALRGDPPRGE 114 (310)
T ss_dssp HHHHGGGCCSEEEECCCSTTCSHHHHHHHHHHHHHTTCCBCEEEECTTSCHHHHHHHHHHHHHTTCCEEEEECCCCSTTC
T ss_pred HHHHhcCCCCEEEEecCCCCCcchhHHHHHHHHHHhCCCeEEEeecCCCCHHHHHHHHHHHHHCCCCEEEEEcCCCCCCC
Confidence 44456668899999864421 112334566677788887763 333455555665543 378888888775322
Q ss_pred C------CccchhHHHHHHHHHHHhhhcCCCCeEEEecCC-------Ch----hcHHHHHHcCCcEEEEcccccCCCCHH
Q 023494 202 G------QSFIESQVKKISDLRRMCLEKGVNPWIEVDGGV-------GP----KNAYKVIEAGANALVAGSAVFGAKDYA 264 (281)
Q Consensus 202 G------Q~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI-------~~----e~i~~~~~aGAD~~VvGSaIf~a~dp~ 264 (281)
| +.|. +..+-|+.++++.. .++.|.|.|-= +. +.+++=+++|||.+| --.+|..+...
T Consensus 115 g~~~~~~~~f~-~a~~Lv~~ir~~~g---~~f~igvA~yPE~Hp~~~~~~~d~~~Lk~Kv~aGAdf~i-TQ~ffD~~~~~ 189 (310)
T 3apt_A 115 RVFRPHPEGFR-YAAELVALIRERYG---DRVSVGGAAYPEGHPESESLEADLRHFKAKVEAGLDFAI-TQLFFNNAHYF 189 (310)
T ss_dssp CSCCCCTTSCS-SHHHHHHHHHHHHG---GGSEEEEEECTTCCTTSSCHHHHHHHHHHHHHHHCSEEE-ECCCSCHHHHH
T ss_pred CCCCCCCCCCC-CHHHHHHHHHHhCC---CCeEEEEEeCCCcCCCCCCHHHHHHHHHHHHHcCCCEEE-ecccCCHHHHH
Confidence 2 1255 67788888877642 13677775521 11 133333689999554 45667655555
Q ss_pred HHHHHHHH
Q 023494 265 EAIKGIKT 272 (281)
Q Consensus 265 ~~~~~l~~ 272 (281)
...+++++
T Consensus 190 ~f~~~~r~ 197 (310)
T 3apt_A 190 GFLERARR 197 (310)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55554443
No 471
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=82.51 E-value=10 Score=29.14 Aligned_cols=58 Identities=12% Similarity=0.117 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHhhhcCCCCe-EEEecCCChhcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHHHhcC
Q 023494 209 QVKKISDLRRMCLEKGVNPW-IEVDGGVGPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKR 275 (281)
Q Consensus 209 ~l~kI~~lr~l~~~~~~~~~-I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~~~~~ 275 (281)
.++-++++++..+ +.+ |.+.+--+.+....+.++|++.++ .+.-++.+..+.+++.++
T Consensus 98 g~~~~~~lr~~~~----~~~ii~ls~~~~~~~~~~~~~~g~~~~l-----~KP~~~~~l~~~i~~~l~ 156 (157)
T 3hzh_A 98 GITCLSNIMEFDK----NARVIMISALGKEQLVKDCLIKGAKTFI-----VKPLDRAKVLQRVMSVFV 156 (157)
T ss_dssp HHHHHHHHHHHCT----TCCEEEEESCCCHHHHHHHHHTTCSEEE-----ESSCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhhCC----CCcEEEEeccCcHHHHHHHHHcCCCEEE-----eCCCCHHHHHHHHHHHhc
Confidence 3555666665532 233 556777778889999999999765 345577777777766543
No 472
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=82.42 E-value=4.4 Score=36.49 Aligned_cols=195 Identities=12% Similarity=0.038 Sum_probs=110.9
Q ss_pred CHHHHHHHHHHcCCCeEEEEeee--CcccccccCCHHHHHHcCcC-CCCCeeEEEEe--cChhhHHHHHHHcCCCEEEEc
Q 023494 71 KLGEQVKAVELAGCDWIHVDVMD--GRFVPNITIGPLVVDALRPV-TDLPLDVHLMI--VEPEQRVPDFIKAGADIVSVH 145 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d~iHiDImD--G~fvpn~~~G~~~I~~ir~~-t~~~idaHLmv--~dp~~~i~~~~~aGAd~Itvh 145 (281)
.+.++...+.++|+..+|+-+-| |.-......--++++.||+. ++..+.+-.=. .++++....+ +...|+.++-
T Consensus 35 Eia~~A~~~~~AGAaivHlH~Rd~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TTgg~~~~~eeR~~~~-~~~Pe~aSl~ 113 (284)
T 3chv_A 35 EQVESTQEAFEAGAAIAHCHVRNDDGTPSSDPDRFARLTEGLHTHCPGMIVQFSTGGRSGAGQARGGML-PLKPDMASLS 113 (284)
T ss_dssp HHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCCTTTCCGGGGGTTG-GGCCSEEEEC
T ss_pred HHHHHHHHHHHcCCcEEEeeecCCCCCcCCCHHHHHHHHHHHHHhCCCeEEEeCCCCCCCCHHHHHHhh-hcCCCEEEec
Confidence 55566667788999999998887 54222333446778888875 46444432201 1344433333 5678998887
Q ss_pred cccc---------ccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhcc------CCEEEEEeecCCCCCCccchhHH
Q 023494 146 CEQS---------STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV------VDLVLIMSVNPGFGGQSFIESQV 210 (281)
Q Consensus 146 ~Ea~---------~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~------vD~IlvmsV~pG~~GQ~f~~~~l 210 (281)
.-.. +...+.++++.++++|+++-+.+.....+..+..+.+. ..+-.+|++ + +|++-.++.+
T Consensus 114 ~Gs~Nf~~~v~~n~~~~~~~~~~~~~e~Gv~pE~e~fd~g~l~~~~~l~~~Gll~~p~~~~~vlGv-~--~g~~~~~~~L 190 (284)
T 3chv_A 114 VGSNNFPSRVYENPPDLVDWLAAQMRSYRVTPEIEAFDLSHILRAIDMHGRGLLYGKLYVQFVMGV-K--NAMPADREVF 190 (284)
T ss_dssp CSCEECSSSEECCCHHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHTTCSCSSCEEEEEECC-T--TSCCCCHHHH
T ss_pred CcccccCCccccCCHHHHHHHHHHHHHcCCEEEEEEECHHHHHHHHHHHHcCCCCCCceEEEEEec-C--CCCCCCHHHH
Confidence 5210 23458899999999999999988644455555555442 234455654 3 3555555555
Q ss_pred HHHHHHHHHhhhcCCCCeEEEecCCChhc---HHHHHHcCCcEEEEc--ccccC-----CCCHHHHHHHHHHhc
Q 023494 211 KKISDLRRMCLEKGVNPWIEVDGGVGPKN---AYKVIEAGANALVAG--SAVFG-----AKDYAEAIKGIKTSK 274 (281)
Q Consensus 211 ~kI~~lr~l~~~~~~~~~I~VDGGI~~e~---i~~~~~aGAD~~VvG--SaIf~-----a~dp~~~~~~l~~~~ 274 (281)
.-. .+.+........ +---|+.... ....+..|-+ +=+| =.++- +.+-.+.++++.+.+
T Consensus 191 ~~~---~~~~p~~~~~~~-ws~~g~Gr~q~p~~~~A~~~GGh-vRVGlEDnl~~~~G~~A~sNa~lV~~~~~i~ 259 (284)
T 3chv_A 191 DFY---VRMMRTRAPQAE-WCAAGIGANQLTVNEWAIAAGGH-TRTGLEDNIRLDRQTLAPSNAALVRRSVELC 259 (284)
T ss_dssp HHH---HHHHHHHCTTSE-EEEEECTTHHHHHHHHHHHTTCE-EEESTTTCCBSSSSCBCCCHHHHHHHHHHHH
T ss_pred HHH---HHhccCCCCCce-EEEEecCcchhHHHHHHHHcCCC-eEEecccccCCCCCCCCCCHHHHHHHHHHHH
Confidence 433 333333111123 3334455443 3455888988 5567 33442 224445555555543
No 473
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=82.41 E-value=19 Score=30.87 Aligned_cols=177 Identities=15% Similarity=0.155 Sum_probs=106.3
Q ss_pred cCccCHHHHHHHHHHcCCCeEEEEeeeC-cccccc--cC-C---HHHHHHcCcCCCCCeeEEEEecChhhHHHH---HHH
Q 023494 67 ANFAKLGEQVKAVELAGCDWIHVDVMDG-RFVPNI--TI-G---PLVVDALRPVTDLPLDVHLMIVEPEQRVPD---FIK 136 (281)
Q Consensus 67 ~D~~~l~~~l~~l~~~G~d~iHiDImDG-~fvpn~--~~-G---~~~I~~ir~~t~~~idaHLmv~dp~~~i~~---~~~ 136 (281)
+|-.|+++ ++.+.+.|. .|| +.-|.+ .. | .+.+++|.+..+-++.+-..-.|.+..+++ +.+
T Consensus 5 lDtAn~~e-i~~~~~~g~-------i~GVTTNPsli~k~~g~~~~~~~~eI~~~v~G~Vs~EV~a~d~e~mi~ea~~l~~ 76 (212)
T 3r8r_A 5 VDTANIDE-IREANELGI-------LAGVTTNPSLVAKEANVSFHDRLREITDVVKGSVSAEVISLKAEEMIEEGKELAK 76 (212)
T ss_dssp EECCCHHH-HHHHHHTTC-------EEEEECCHHHHHTSCSSCHHHHHHHHHHHCCSCEEEECCCSSHHHHHHHHHHHHT
T ss_pred EecCCHHH-HHHHHhcCC-------cccccCCHHHHHHccCCCHHHHHHHHHHhcCCCEEEEEecCCHHHHHHHHHHHHH
Confidence 56667754 677776653 345 233443 22 2 356666666544566665555787766554 445
Q ss_pred cCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCCEEEEEeecCCCCCCccchhHHHHHHHH
Q 023494 137 AGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDL 216 (281)
Q Consensus 137 aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~l 216 (281)
.+ +.+.+-.-+ +.+=-+.++.+.+.|+++-+.+--+ .-+.+......++||.. .-|.- ..+....++.++++
T Consensus 77 ~~-~nv~IKIP~--T~eGl~A~~~L~~~GI~vn~TlifS-~~Qa~~Aa~AGa~yISP---fvgRi-~d~~~dG~~~v~~i 148 (212)
T 3r8r_A 77 IA-PNITVKIPM--TSDGLKAVRALTDLGIKTNVTLIFN-ANQALLAARAGATYVSP---FLGRL-DDIGHNGLDLISEV 148 (212)
T ss_dssp TC-TTEEEEEES--SHHHHHHHHHHHHTTCCEEEEEECS-HHHHHHHHHHTCSEEEE---BHHHH-HHTTSCHHHHHHHH
T ss_pred hC-CCEEEEeCC--CHHHHHHHHHHHHCCCcEEEEEeCC-HHHHHHHHHcCCeEEEe---ccchh-hhcCCChHHHHHHH
Confidence 55 344444432 2222356777788899998765422 22222222235788743 22210 00112346778888
Q ss_pred HHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEcccccC
Q 023494 217 RRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFG 259 (281)
Q Consensus 217 r~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSaIf~ 259 (281)
+++++.++++.+|-+..=-|+.++.++..+|+|.+-+.-.+++
T Consensus 149 ~~~~~~~~~~t~ilaAS~R~~~~v~~~a~~G~d~~Tip~~vl~ 191 (212)
T 3r8r_A 149 KQIFDIHGLDTQIIAASIRHPQHVTEAALRGAHIGTMPLKVIH 191 (212)
T ss_dssp HHHHHHHTCCCEEEEBSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred HHHHHHcCCCCEEEEecCCCHHHHHHHHHcCCCEEEcCHHHHH
Confidence 9988888888888666656688999999999999999877664
No 474
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=82.31 E-value=6.6 Score=36.55 Aligned_cols=113 Identities=6% Similarity=0.130 Sum_probs=71.6
Q ss_pred ChhhHHH---HHHHcCCCEEEEccc--cc--------------ccccHHHHHHHHHH-c--CCcEEEEECCCCCHHHHHH
Q 023494 126 EPEQRVP---DFIKAGADIVSVHCE--QS--------------STIHLHRTLNQIKD-L--GAKAGVVLNPATSLSAIEC 183 (281)
Q Consensus 126 dp~~~i~---~~~~aGAd~Itvh~E--a~--------------~~~~i~~~l~~ik~-~--G~k~Glai~p~t~ie~~~~ 183 (281)
+|..+.+ .+.+.|.+.+=+|.. .. ......+.++++|+ . ++.+.+..|.....+....
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~~~G~~~~~~~~~~~~e~v~avRea~G~d~~l~vDan~~~~~~~a~~ 228 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARVAAVREAVGPEVEVAIDMHGRFDIPSSIR 228 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCcCccccchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHH
Confidence 5665544 456789999999861 00 01224467777777 3 4677788887777766555
Q ss_pred hhcc-----CCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEE
Q 023494 184 VLDV-----VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVA 253 (281)
Q Consensus 184 ~l~~-----vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~Vv 253 (281)
+++. +++| .|++.+..++-.+++++. .+++|+.|+.+. ++.+.++++.| +|++.+
T Consensus 229 ~~~~l~~~~i~~i----------EeP~~~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 290 (410)
T 2qq6_A 229 FARAMEPFGLLWL----------EEPTPPENLDALAEVRRS-----TSTPICAGENVYTRFDFRELFAKRAVDYVMP 290 (410)
T ss_dssp HHHHHGGGCCSEE----------ECCSCTTCHHHHHHHHTT-----CSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred HHHHHhhcCCCeE----------ECCCChhhHHHHHHHHhh-----CCCCEEeCCCcCCHHHHHHHHHcCCCCEEec
Confidence 5432 3433 244555555555555543 357999999986 78888888776 677754
No 475
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=82.22 E-value=9.8 Score=35.70 Aligned_cols=123 Identities=11% Similarity=0.023 Sum_probs=79.7
Q ss_pred CCeeEEE-EecChhhHHHH---HHHcCCCEEEEcccccc------cccHHHHHHHHHHc---CCcEEEEECCCCCHHHHH
Q 023494 116 LPLDVHL-MIVEPEQRVPD---FIKAGADIVSVHCEQSS------TIHLHRTLNQIKDL---GAKAGVVLNPATSLSAIE 182 (281)
Q Consensus 116 ~~idaHL-mv~dp~~~i~~---~~~aGAd~Itvh~Ea~~------~~~i~~~l~~ik~~---G~k~Glai~p~t~ie~~~ 182 (281)
+++.+.. ...+|+.+.+. +.+.|.+.+=++.-..+ .+...+.++++|+. ++.+.+..|.....+...
T Consensus 168 v~~y~s~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG~d~~L~vDaN~~~~~~~Ai 247 (412)
T 3stp_A 168 IPVYYSKLYAGSIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIGYDNDLMLECYMGWNLDYAK 247 (412)
T ss_dssp EEEEEECCCSCCHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHH
T ss_pred EEEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHH
Confidence 4555542 33577776554 45689999999963210 12234566777764 567788888888877655
Q ss_pred Hhhcc-----CCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEE
Q 023494 183 CVLDV-----VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVA 253 (281)
Q Consensus 183 ~~l~~-----vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~Vv 253 (281)
.+++. +++| .|++.+..++-++++++. .+++|..|+.+. .+.+..+++.| +|++.+
T Consensus 248 ~~~~~Le~~~i~~i----------EeP~~~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~~li~~~a~D~v~i 310 (412)
T 3stp_A 248 RMLPKLAPYEPRWL----------EEPVIADDVAGYAELNAM-----NIVPISGGEHEFSVIGCAELINRKAVSVLQY 310 (412)
T ss_dssp HHHHHHGGGCCSEE----------ECCSCTTCHHHHHHHHHT-----CSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHhcCCCEE----------ECCCCcccHHHHHHHHhC-----CCCCEEeCCCCCCHHHHHHHHHcCCCCEEec
Confidence 55432 3444 255666556666666654 358999999998 77888888876 787754
No 476
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=82.12 E-value=5 Score=37.28 Aligned_cols=124 Identities=8% Similarity=0.096 Sum_probs=78.4
Q ss_pred CCeeEEEEecChhhHHHH---HHHc-CCCEEEEcccccccccHHHHHHHHHHc---CCcEEEEECCCCCHHHHHHhhcc-
Q 023494 116 LPLDVHLMIVEPEQRVPD---FIKA-GADIVSVHCEQSSTIHLHRTLNQIKDL---GAKAGVVLNPATSLSAIECVLDV- 187 (281)
Q Consensus 116 ~~idaHLmv~dp~~~i~~---~~~a-GAd~Itvh~Ea~~~~~i~~~l~~ik~~---G~k~Glai~p~t~ie~~~~~l~~- 187 (281)
+++.+..-..+|+...+. +.+. |...+=+..-....+.-.+.++++|+. ++.+.+..|.....+....+++.
T Consensus 157 v~~y~s~g~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~d~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~~~~~~l 236 (383)
T 3toy_A 157 IPAYDSYGVLDARDDERTLRTACDEHGFRAIKSKGGHGDLATDEAMIKGLRALLGPDIALMLDFNQSLDPAEATRRIARL 236 (383)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHTSCCCEEEEECCSSCHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHH
T ss_pred eEEeEecCCCCHHHHHHHHHHHHHccCCcEEEEecCCCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHHHH
Confidence 344443333678766544 4567 999998876421112233566677764 46777888888887665555432
Q ss_pred ----CCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-CcEEEEc
Q 023494 188 ----VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG-ANALVAG 254 (281)
Q Consensus 188 ----vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG-AD~~VvG 254 (281)
+++| .|++.+..++-++++++.. .++|+.|..+. .+.+..+++.| +|++.+-
T Consensus 237 ~~~~i~~i----------EeP~~~~d~~~~~~l~~~~-----~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik 294 (383)
T 3toy_A 237 ADYDLTWI----------EEPVPQENLSGHAAVRERS-----EIPIQAGENWWFPRGFAEAIAAGASDFIMPD 294 (383)
T ss_dssp GGGCCSEE----------ECCSCTTCHHHHHHHHHHC-----SSCEEECTTCCHHHHHHHHHHHTCCSEECCC
T ss_pred HhhCCCEE----------ECCCCcchHHHHHHHHhhc-----CCCEEeCCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 3333 3566666666666666643 47999999998 67888888766 6777544
No 477
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=82.06 E-value=26 Score=30.86 Aligned_cols=140 Identities=14% Similarity=0.234 Sum_probs=78.6
Q ss_pred hHHHHHHHcCCCEEEEccccccc-----ccHHHHHHHHHHc-CCcEEEEECCCCCHHHHHHhhcc-CCEEEEEe-ecCCC
Q 023494 129 QRVPDFIKAGADIVSVHCEQSST-----IHLHRTLNQIKDL-GAKAGVVLNPATSLSAIECVLDV-VDLVLIMS-VNPGF 200 (281)
Q Consensus 129 ~~i~~~~~aGAd~Itvh~Ea~~~-----~~i~~~l~~ik~~-G~k~Glai~p~t~ie~~~~~l~~-vD~Ilvms-V~pG~ 200 (281)
++++.+.++|.+.|-+.....+. .+..+.++.+++. +.++.+.+ + ..+.++..++. +|.|.+.. ..+.+
T Consensus 30 ~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~~~v~~l~-~--n~~~i~~a~~~G~~~V~i~~~~S~~h 106 (295)
T 1ydn_A 30 ALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRADGVRYSVLV-P--NMKGYEAAAAAHADEIAVFISASEGF 106 (295)
T ss_dssp HHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEEEEEC-S--SHHHHHHHHHTTCSEEEEEEESCHHH
T ss_pred HHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhCCCCEEEEEe-C--CHHHHHHHHHCCCCEEEEEEecCHHH
Confidence 46777888899988886532111 1456777777665 66665443 3 35666666553 78776531 11111
Q ss_pred CC---CccchhHHHHHHHHHHHhhhcCCCCeEEEe--c------CCChhcHHHHH----HcCCcEEEEcccccCCCCHHH
Q 023494 201 GG---QSFIESQVKKISDLRRMCLEKGVNPWIEVD--G------GVGPKNAYKVI----EAGANALVAGSAVFGAKDYAE 265 (281)
Q Consensus 201 ~G---Q~f~~~~l~kI~~lr~l~~~~~~~~~I~VD--G------GI~~e~i~~~~----~aGAD~~VvGSaIf~a~dp~~ 265 (281)
.- ..-.++.++++++..++..+.|..+..++- + -.+++.+.+++ ++|+|.+.+.-. .+...|..
T Consensus 107 ~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~Dt-~G~~~P~~ 185 (295)
T 1ydn_A 107 SKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVSLGDT-IGRGTPDT 185 (295)
T ss_dssp HHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEEEEET-TSCCCHHH
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEecCC-CCCcCHHH
Confidence 00 112356777877777777766544331121 2 34566555544 799999998832 22245655
Q ss_pred HHHHHHH
Q 023494 266 AIKGIKT 272 (281)
Q Consensus 266 ~~~~l~~ 272 (281)
..+.++.
T Consensus 186 ~~~lv~~ 192 (295)
T 1ydn_A 186 VAAMLDA 192 (295)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444443
No 478
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=82.00 E-value=21 Score=32.28 Aligned_cols=72 Identities=15% Similarity=0.255 Sum_probs=43.7
Q ss_pred HHHHHHHHHHcCCCeEEEEeeeCc--ccc--cccC--CHHHHHHcCcCCCCCeeEEEE--ecChhhHHHHHHHcCCCEEE
Q 023494 72 LGEQVKAVELAGCDWIHVDVMDGR--FVP--NITI--GPLVVDALRPVTDLPLDVHLM--IVEPEQRVPDFIKAGADIVS 143 (281)
Q Consensus 72 l~~~l~~l~~~G~d~iHiDImDG~--fvp--n~~~--G~~~I~~ir~~t~~~idaHLm--v~dp~~~i~~~~~aGAd~It 143 (281)
.++..+.++..|+|.|.+++--.+ +.| +-.| -.+.++++|+.++.|+.+-+. ..++ +.+..+.++|+|+|+
T Consensus 129 ~~~~~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~~-~~a~~a~~~Gad~I~ 207 (349)
T 1p0k_A 129 AAQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVKEVGFGMSK-ASAGKLYEAGAAAVD 207 (349)
T ss_dssp HHHHHHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHCSSCEEEEEESSCCCH-HHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHcCCCEEEEecCCCCCH-HHHHHHHHcCCCEEE
Confidence 444445566789999876643110 001 1122 136788888877788887442 0343 357788899999999
Q ss_pred E
Q 023494 144 V 144 (281)
Q Consensus 144 v 144 (281)
+
T Consensus 208 v 208 (349)
T 1p0k_A 208 I 208 (349)
T ss_dssp E
T ss_pred E
Confidence 9
No 479
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=81.96 E-value=27 Score=30.95 Aligned_cols=173 Identities=13% Similarity=0.157 Sum_probs=98.8
Q ss_pred ccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCH----HHHHHcCcC--CCCCeeEEEEecChhh---HHHHHHH
Q 023494 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGP----LVVDALRPV--TDLPLDVHLMIVEPEQ---RVPDFIK 136 (281)
Q Consensus 66 a~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~----~~I~~ir~~--t~~~idaHLmv~dp~~---~i~~~~~ 136 (281)
..|+..+++.++.+.+.|++-+-+ =|+.--..++.. ++++...+. -..|+.++.-.++..+ +.+.+.+
T Consensus 19 ~iD~~~l~~lv~~li~~Gv~gl~v---~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~ 95 (292)
T 3daq_A 19 KVNLEALKAHVNFLLENNAQAIIV---NGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKA 95 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEE---SSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEE---CccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHH
Confidence 577888889999999999997643 233222223333 344444443 2478999877667654 4556678
Q ss_pred cCCCEEEEccc---ccccccHHHHHHHHHH-cCCcEEEEECC-----CCCHHHHHHhhccCCEEEEEeecCCCCCCccch
Q 023494 137 AGADIVSVHCE---QSSTIHLHRTLNQIKD-LGAKAGVVLNP-----ATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIE 207 (281)
Q Consensus 137 aGAd~Itvh~E---a~~~~~i~~~l~~ik~-~G~k~Glai~p-----~t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~~ 207 (281)
+|||.+.+..- ..+.+.+.+..+.+-+ .++.+.+=-+| +-+.+.+.++.+...++.+= +. .|
T Consensus 96 ~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiK--~s--sg----- 166 (292)
T 3daq_A 96 LGADAIMLITPYYNKTNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQHPYIVALK--DA--TN----- 166 (292)
T ss_dssp HTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEEE--EC--CC-----
T ss_pred cCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhcCCCEEEEE--eC--CC-----
Confidence 89998887632 1112234444444333 47777765544 33557777776644444321 10 11
Q ss_pred hHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEccc
Q 023494 208 SQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSA 256 (281)
Q Consensus 208 ~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSa 256 (281)
.+.++.++++..+. .++.+ ..| -. +.+-.....|++.+|.|.+
T Consensus 167 -d~~~~~~~~~~~~~--~~f~v-~~G-~d-~~~~~~l~~G~~G~is~~~ 209 (292)
T 3daq_A 167 -DFEYLEEVKKRIDT--NSFAL-YSG-ND-DNVVEYYQRGGQGVISVIA 209 (292)
T ss_dssp -CHHHHHHHHTTSCT--TTSEE-EES-CG-GGHHHHHHTTCCEEEESGG
T ss_pred -CHHHHHHHHHHCCC--CCEEE-EEC-CH-HHHHHHHhcCCCEEEeCHH
Confidence 24555555543321 03444 233 33 3455668899999999965
No 480
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=81.82 E-value=6 Score=32.52 Aligned_cols=92 Identities=22% Similarity=0.192 Sum_probs=61.1
Q ss_pred CHHHHHHHHHHcCCC-eEEEEe-eeCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhHHHHHHHcCCCEEEEcccc
Q 023494 71 KLGEQVKAVELAGCD-WIHVDV-MDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQ 148 (281)
Q Consensus 71 ~l~~~l~~l~~~G~d-~iHiDI-mDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea 148 (281)
.+.+.++.+...|+. .+-.++ .+|.. -.+..+.++++++..+.|+.+---+.+|... ..+.+.|+|.+.+.-.-
T Consensus 131 ~~~~~i~~~~~~~~~~vli~~~~~~g~~---~g~~~~~i~~~~~~~~~Pvia~~g~~~~~~~-~~~~~~G~~~~~vg~a~ 206 (237)
T 3cwo_X 131 LLRDWVVEVEKRGAGEILLTSIDRDGTK---SGYDTEMIRFVRPLTTLPIIASGGAGKMEHF-LEAFLAGADAALAASVF 206 (237)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTTTCC---SCCCHHHHHHHGGGCCSCEEEESCCCSHHHH-HHHHHHTCSEEEESHHH
T ss_pred CHHHHHHHHhhcCCCeEEEEecCCCCcc---ccccHHHHHHHHHhcCCCEEecCCCCCHHHH-HHHHHcCcHHHhhhHHH
Confidence 567778888887887 333344 33421 2334778999888778898874445666644 44557999999877321
Q ss_pred -cccccHHHHHHHHHHcCC
Q 023494 149 -SSTIHLHRTLNQIKDLGA 166 (281)
Q Consensus 149 -~~~~~i~~~l~~ik~~G~ 166 (281)
....++.++++.+++.|+
T Consensus 207 ~~~~~~~~~~~~~l~~~~~ 225 (237)
T 3cwo_X 207 HFREIDVRELKEYLKKHGV 225 (237)
T ss_dssp HTTSSCHHHHHHHHHTTTC
T ss_pred HcCCCCHHHHHHHHHHCCC
Confidence 023468888888888776
No 481
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=81.76 E-value=4.8 Score=34.77 Aligned_cols=125 Identities=11% Similarity=0.103 Sum_probs=73.5
Q ss_pred EeEEEeccCc---cCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcC---CCCCeeE-EEEe-------c
Q 023494 60 VSPSILSANF---AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV---TDLPLDV-HLMI-------V 125 (281)
Q Consensus 60 i~pSila~D~---~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~---t~~~ida-HLmv-------~ 125 (281)
|.-|.++.-. ..+++.++.+.+.|.+.+++..-. + +. +....++++|+. .++.+.+ |-.. .
T Consensus 4 igi~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~--~-~~--~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~l~~~ 78 (294)
T 3vni_A 4 HGIYYAYWEQEWEADYKYYIEKVAKLGFDILEIAASP--L-PF--YSDIQINELKACAHGNGITLTVGHGPSAEQNLSSP 78 (294)
T ss_dssp EEEEGGGGCSSSCCCHHHHHHHHHHHTCSEEEEESTT--G-GG--CCHHHHHHHHHHHHHTTCEEEEEECCCGGGCTTCS
T ss_pred EEEehhhhcCCcCcCHHHHHHHHHHcCCCEEEecCcc--c-CC--cCHHHHHHHHHHHHHcCCeEEEeecCCCCcCCCCC
Confidence 4444444322 479999999999999998886321 2 22 345555555542 5666665 3221 2
Q ss_pred Chh----------hHHHHHHHcCCCEEE--Ecccc-------cc--------cccHHHHHHHHHHcCCcEEEEECC---C
Q 023494 126 EPE----------QRVPDFIKAGADIVS--VHCEQ-------SS--------TIHLHRTLNQIKDLGAKAGVVLNP---A 175 (281)
Q Consensus 126 dp~----------~~i~~~~~aGAd~It--vh~Ea-------~~--------~~~i~~~l~~ik~~G~k~Glai~p---~ 175 (281)
||. +.++.+.+.|++.+. +|.-. .+ .+.+.++.+.++++|+++++--.+ .
T Consensus 79 d~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~~ 158 (294)
T 3vni_A 79 DPDIRKNAKAFYTDLLKRLYKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFEN 158 (294)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCCEEEESTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCTTTC
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCeeeccccCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCcccC
Confidence 442 245566788999997 44210 00 112556667778899998886543 1
Q ss_pred ---CCHHHHHHhhccCC
Q 023494 176 ---TSLSAIECVLDVVD 189 (281)
Q Consensus 176 ---t~ie~~~~~l~~vD 189 (281)
...+.+..+++.++
T Consensus 159 ~~~~~~~~~~~l~~~v~ 175 (294)
T 3vni_A 159 YLINTAQEGVDFVKQVD 175 (294)
T ss_dssp SSCCSHHHHHHHHHHHC
T ss_pred cccCCHHHHHHHHHHcC
Confidence 24556666666543
No 482
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=81.69 E-value=2.8 Score=35.96 Aligned_cols=56 Identities=11% Similarity=0.038 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHhhhcCCCCeEEEecCCCh-------hcHHHHHHcCCcEEEEcccccCCCCHHHHHHHHH
Q 023494 209 QVKKISDLRRMCLEKGVNPWIEVDGGVGP-------KNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIK 271 (281)
Q Consensus 209 ~l~kI~~lr~l~~~~~~~~~I~VDGGI~~-------e~i~~~~~aGAD~~VvGSaIf~a~dp~~~~~~l~ 271 (281)
.++-|+++|+.. +.++.+-+++|+ +.++.+.++|||.+++|..-. +++++..+.++
T Consensus 68 ~~~~i~~i~~~~-----~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~~~--~~~~~~~~~~~ 130 (248)
T 1geq_A 68 AFWIVKEFRRHS-----STPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPV--FHAKEFTEIAR 130 (248)
T ss_dssp HHHHHHHHHTTC-----CCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTCCG--GGHHHHHHHHH
T ss_pred HHHHHHHHHhhC-----CCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECCCCh--hhHHHHHHHHH
Confidence 345555555432 357777666785 788999999999999995322 34444444443
No 483
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=81.61 E-value=28 Score=30.89 Aligned_cols=171 Identities=12% Similarity=0.154 Sum_probs=97.9
Q ss_pred ccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCH----HHHHHcCcCC--CCCeeEEEEecChhh---HHHHHHH
Q 023494 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGP----LVVDALRPVT--DLPLDVHLMIVEPEQ---RVPDFIK 136 (281)
Q Consensus 66 a~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~----~~I~~ir~~t--~~~idaHLmv~dp~~---~i~~~~~ 136 (281)
..|+..+++.++.+.+.|++-+-+ =|+.--..++.. ++++...+.. ..|+.++.-.++..+ +.+.+.+
T Consensus 20 ~iD~~~l~~lv~~li~~Gv~gl~~---~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~ 96 (294)
T 3b4u_A 20 TVDIDAMIAHARRCLSNGCDSVTL---FGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALN 96 (294)
T ss_dssp SBCHHHHHHHHHHHHHTTCSEEEE---SSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEE---CccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHh
Confidence 367778889999999999997643 243222233333 3444444432 368999888777654 4555678
Q ss_pred cCCCEEEEcccc----cccccHHHHHHHHHH-c---CCcEEEEECCC-----CCHHHHHHhh-ccCC-EEEEEeecCCCC
Q 023494 137 AGADIVSVHCEQ----SSTIHLHRTLNQIKD-L---GAKAGVVLNPA-----TSLSAIECVL-DVVD-LVLIMSVNPGFG 201 (281)
Q Consensus 137 aGAd~Itvh~Ea----~~~~~i~~~l~~ik~-~---G~k~Glai~p~-----t~ie~~~~~l-~~vD-~IlvmsV~pG~~ 201 (281)
+|||.+.+..-. .+.+.+.+..+.+-+ . ++.+.+=-+|. -+.+.+.++. +... ++.+= +. .
T Consensus 97 ~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~La~~~pn~ivgiK--ds--~ 172 (294)
T 3b4u_A 97 AGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLKAAFPGIVTGVK--DS--S 172 (294)
T ss_dssp TTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHHHHHCTTTEEEEE--EC--C
T ss_pred cCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHHHHhCCCcEEEEE--EC--C
Confidence 999998876321 112334444444433 3 66666644442 3556777776 4444 44331 11 1
Q ss_pred CCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEccc
Q 023494 202 GQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSA 256 (281)
Q Consensus 202 GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSa 256 (281)
| .+.++.++++..+ ++.+ .. |-. +.+-.....|++.+|.|.+
T Consensus 173 g------d~~~~~~~~~~~~----~f~v-~~-G~d-~~~l~~l~~G~~G~is~~~ 214 (294)
T 3b4u_A 173 G------NWSHTERLLKEHG----DLAI-LI-GDE-RDLARGVRLGGQGAISGVA 214 (294)
T ss_dssp C------CHHHHHHHHHHHT----TSEE-EE-CCH-HHHHHHHHTTCCEEEESGG
T ss_pred C------CHHHHHHHHHhCC----CeEE-EE-ccH-HHHHHHHHCCCCEEEeCHH
Confidence 1 2445555555432 3444 23 332 3455667899999999955
No 484
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=81.53 E-value=25 Score=30.20 Aligned_cols=178 Identities=13% Similarity=0.049 Sum_probs=0.0
Q ss_pred ccCHHHHHHHHHHcCCCeEEEEee---eCcccccccC---C---------------------------------HHHHHH
Q 023494 69 FAKLGEQVKAVELAGCDWIHVDVM---DGRFVPNITI---G---------------------------------PLVVDA 109 (281)
Q Consensus 69 ~~~l~~~l~~l~~~G~d~iHiDIm---DG~fvpn~~~---G---------------------------------~~~I~~ 109 (281)
+-|...+++.+.+.|+|++++||. ||..|-.... . .++++.
T Consensus 22 PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~~~~l~Rtt~~~g~v~~~t~~eL~~l~~~~~~~iptL~evl~~ 101 (258)
T 2o55_A 22 PENTLRSFVLCMERNIPYIETDLRVCKTGEIVLFHGTPEGTIPFYKDGTSRIGDLSLEELKRLDVGGGHTIPSLEELFVA 101 (258)
T ss_dssp CTTCHHHHHHHHHTTCCEEEEEEEECTTSCEEECCCSTTSBCTTSTTTTCBGGGSCHHHHTTCBSSSSCBCCBHHHHHHH
T ss_pred CccHHHHHHHHHHcCcCEEEEEEEEecCCeEEEEeCCCCccceeeCCCCeehhhCcHHHHhhcCCCCCCccCCHHHHHHH
Q ss_pred cCcCC-CCCeeEEEEecC--------hhhHHHHHHHcCC-CEEEEcccccccccHHHHHHHHHHc--CCcEEEEE---CC
Q 023494 110 LRPVT-DLPLDVHLMIVE--------PEQRVPDFIKAGA-DIVSVHCEQSSTIHLHRTLNQIKDL--GAKAGVVL---NP 174 (281)
Q Consensus 110 ir~~t-~~~idaHLmv~d--------p~~~i~~~~~aGA-d~Itvh~Ea~~~~~i~~~l~~ik~~--G~k~Glai---~p 174 (281)
++..+ +..+.+.+|... ....++.+.+.|. +.+.+.... .+.++.+|+. +++.|+.+ .+
T Consensus 102 ~~~~~~~~~l~iEiK~~~~~~~~~~~~~~v~~~l~~~~~~~~v~i~Sf~------~~~l~~~~~~~p~~~~~~l~~~~~~ 175 (258)
T 2o55_A 102 IEEQKFNLKLNLELKGEEWKRKESGDHQRLLLLVEKYHMQERVDYCSFH------HEALAHLKALCPDVKITYLFNYMGQ 175 (258)
T ss_dssp HHHSCSCCEEEEEECCSSSSSTTSSHHHHHHHHHHTTTCGGGEEEEESS------HHHHHHHHHHCTTCEEEEECCTTSC
T ss_pred hhhhcCceEEEEEEccCCccccchHHHHHHHHHHHHcCCCCCEEEEeCC------HHHHHHHHHHCCCCcEEEEEeCCCC
Q ss_pred CCCHHHHHHhhcc-CCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecC----CChhcHHHHHHcCCc
Q 023494 175 ATSLSAIECVLDV-VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGG----VGPKNAYKVIEAGAN 249 (281)
Q Consensus 175 ~t~ie~~~~~l~~-vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGG----I~~e~i~~~~~aGAD 249 (281)
..+.+.+...... ++.|..- +.--.-+.++++++. +.++.+=.= =+++.+..+.+.|+|
T Consensus 176 ~~~~~~~~~~~~~~~~~v~~~----------~~~~~~~~v~~~~~~------G~~v~~wTv~~~~n~~~~~~~l~~~Gvd 239 (258)
T 2o55_A 176 PTPLDFVEQACYGDANGVSML----------FHYLTKEQVCTAHEK------GLSVTVWMPWIFDDSEEDWKKCLELQVD 239 (258)
T ss_dssp CCCTTHHHHHHHTTCSEEEEE----------GGGCCHHHHHHHHHT------TCEEEEECCTTCCCCHHHHHHHHHHTCS
T ss_pred CCHHHHHHHHHhcCCeEEecC----------hhhcCHHHHHHHHHC------CCEEEEeeCCCCCCCHHHHHHHHHcCCC
Q ss_pred EEEEcccccCCCCHHHHHHHHHHhcC
Q 023494 250 ALVAGSAVFGAKDYAEAIKGIKTSKR 275 (281)
Q Consensus 250 ~~VvGSaIf~a~dp~~~~~~l~~~~~ 275 (281)
.++ .++|....+.+++.+.
T Consensus 240 gI~-------TD~p~~~~~~l~~~~~ 258 (258)
T 2o55_A 240 LIC-------SNYPFGLMNFLSNISE 258 (258)
T ss_dssp EEE-------ESCHHHHHHHHTC---
T ss_pred EEE-------eCCHHHHHHHHHHhcC
No 485
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=81.50 E-value=5.9 Score=40.58 Aligned_cols=119 Identities=13% Similarity=0.104 Sum_probs=83.1
Q ss_pred HHH-cC--CCEEEEcccccccccHHHHHHHHHHcC-------CcEEEEECCCCCHHHHHHhhccCCEEEEEeec-----C
Q 023494 134 FIK-AG--ADIVSVHCEQSSTIHLHRTLNQIKDLG-------AKAGVVLNPATSLSAIECVLDVVDLVLIMSVN-----P 198 (281)
Q Consensus 134 ~~~-aG--Ad~Itvh~Ea~~~~~i~~~l~~ik~~G-------~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~-----p 198 (281)
+.+ .| +..|.++.-. +.+++..+.+.++..| .++|+.+....-+..+.+++..+|.+.+.+-+ -
T Consensus 633 a~~~~G~~~~~ImvP~V~-t~~E~~~~~~~l~~~g~~~~~~~~~vg~MIEtp~a~~~ad~ia~~vD~~siGtnDLtq~tl 711 (794)
T 2ols_A 633 VRDEMGLTNVEIMIPFVR-TLGEAEAVVKALKENGLERGKNGLRLIMMCELPSNAVLAEQFLQYFDGFSIGSNDMTQLTL 711 (794)
T ss_dssp HHHTSCCTTEEEEECCCC-SHHHHHHHHHHHHHTTCCTTGGGCCEEEEECSHHHHHTHHHHHTTSSEEEEEHHHHHHHHH
T ss_pred HHHhcCCCCceEEecCCC-CHHHHHHHHHHHHhcCcccCccCCEEEEEECcHHHHHHHHHHHHhCCEEEECHHHHHHHHh
Confidence 455 57 6777777554 3567777778777655 55788885444456777888889999886432 2
Q ss_pred CCC---------CCccchhHHHHHHHHHHHhhhcCCCCeEEEecCC---ChhcHHHHHHcCCcEEEEcc
Q 023494 199 GFG---------GQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGV---GPKNAYKVIEAGANALVAGS 255 (281)
Q Consensus 199 G~~---------GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI---~~e~i~~~~~aGAD~~VvGS 255 (281)
|+. ++...|..+.-|+.+.+..... +.++.|=|-. +++.++.+++.|.|.+.++.
T Consensus 712 g~~R~~~~~~~~~~~~~p~v~~~i~~~v~aar~~--g~~vgicGe~~~~dp~~~~~~~~~G~~~~s~~p 778 (794)
T 2ols_A 712 GLDRDSGLVSESFDERNPAVKVMLHLAISACRKQ--NKYVGICGQGPSDHPDFAKWLVEEGIESVSLNP 778 (794)
T ss_dssp TCCTTCTTTGGGCCTTSHHHHHHHHHHHHHHHTT--TCEEEEESSHHHHCHHHHHHHHHHTCCEEEECG
T ss_pred CCCCCcchhccccCCCCHHHHHHHHHHHHHHHHh--CCEEEEecccCCCCHHHHHHHHHCCCCEEEECH
Confidence 332 4556788888888777766554 4566664444 78889999999999998863
No 486
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=81.49 E-value=28 Score=30.79 Aligned_cols=165 Identities=17% Similarity=0.085 Sum_probs=84.1
Q ss_pred ccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCH----HHHHHcCcCCCCCeeEEEEecChhh---HHHHHHHcC
Q 023494 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGP----LVVDALRPVTDLPLDVHLMIVEPEQ---RVPDFIKAG 138 (281)
Q Consensus 66 a~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~----~~I~~ir~~t~~~idaHLmv~dp~~---~i~~~~~aG 138 (281)
..|+..+++-++.+.+.|++-+-+ =|+.--..++.. ++++...+..+. +.++.-.++..+ +.+.+.++|
T Consensus 16 ~iD~~~l~~lv~~li~~Gv~gl~v---~GtTGE~~~Ls~eEr~~v~~~~~~~~~g-ViaGvg~~~t~~ai~la~~A~~~G 91 (288)
T 2nuw_A 16 KVNVDALKTHAKNLLEKGIDAIFV---NGTTGLGPALSKDEKRQNLNALYDVTHK-LIFQVGSLNLNDVMELVKFSNEMD 91 (288)
T ss_dssp CBCHHHHHHHHHHHHHTTCCEEEE---TSTTTTGGGSCHHHHHHHHHHHTTTCSC-EEEECCCSCHHHHHHHHHHHHTSC
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEE---CccccChhhCCHHHHHHHHHHHHHHhCC-eEEeeCCCCHHHHHHHHHHHHhcC
Confidence 467778889999999999987633 233222233333 444544554333 666655555543 444566789
Q ss_pred CCEEEEcccc----cccccHHHHHHHHH-HcCCcEEEEECCC-----CCHHHHHHhhccCCEEEEEeecCCCCCCccchh
Q 023494 139 ADIVSVHCEQ----SSTIHLHRTLNQIK-DLGAKAGVVLNPA-----TSLSAIECVLDVVDLVLIMSVNPGFGGQSFIES 208 (281)
Q Consensus 139 Ad~Itvh~Ea----~~~~~i~~~l~~ik-~~G~k~Glai~p~-----t~ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~~~ 208 (281)
||.+.+..-. .+.+.+.+..+.+- ..++.+.+=-+|. -+.+.+.++ .++.+= +. .|
T Consensus 92 adavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L----nIvgiK--ds--sg------ 157 (288)
T 2nuw_A 92 ILGVSSHSPYYFPRLPEKFLAKYYEEIARISSHSLYIYNYPAATGYDIPPSILKSL----PVKGIK--DT--NQ------ 157 (288)
T ss_dssp CSEEEECCCCSSCSCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHTTT----TEEEEE--EC--CS------
T ss_pred CCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEECchHhCcCCCHHHHhcc----EEEEEE--eC--CC------
Confidence 9988775221 11222333333333 3355555544442 233434333 222211 11 11
Q ss_pred HHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEccc
Q 023494 209 QVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSA 256 (281)
Q Consensus 209 ~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSa 256 (281)
.+.++.++++ .+ .++.+ =.|-.. .+-..... ++.+|.|.+
T Consensus 158 d~~~~~~~~~-~~---~~f~v--~~G~d~-~~~~~l~~-~~G~is~~a 197 (288)
T 2nuw_A 158 DLAHSLEYKL-NL---PGVKV--YNGSNT-LIYYSLLS-LDGVVASFT 197 (288)
T ss_dssp CHHHHHHHHH-HS---TTCEE--EECCGG-GHHHHHTT-SSEEECGGG
T ss_pred CHHHHHHHHh-cC---CCeEE--EECcHH-HHHHHHHH-hCEEEecHH
Confidence 1445555555 32 23444 334333 44445567 999999955
No 487
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=81.44 E-value=6.8 Score=36.37 Aligned_cols=63 Identities=11% Similarity=0.082 Sum_probs=39.3
Q ss_pred HcCCCeEEEEeeeCccccc--ccC---CHHHHHHcCcCCCCCeeEEEEe---cChhhHHHHHHHcCCCEEEEc
Q 023494 81 LAGCDWIHVDVMDGRFVPN--ITI---GPLVVDALRPVTDLPLDVHLMI---VEPEQRVPDFIKAGADIVSVH 145 (281)
Q Consensus 81 ~~G~d~iHiDImDG~fvpn--~~~---G~~~I~~ir~~t~~~idaHLmv---~dp~~~i~~~~~aGAd~Itvh 145 (281)
++|+..||+..++..+-|. ..| -.+.++++++.+++|+.+-. + ..| +..+.+.++|+|.|.+.
T Consensus 148 ~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~~vPVivK~-vG~g~s~-~~A~~l~~aGad~I~V~ 218 (368)
T 3vkj_A 148 EADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKELSVPIIVKE-SGNGISM-ETAKLLYSYGIKNFDTS 218 (368)
T ss_dssp TCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTCSSCEEEEC-SSSCCCH-HHHHHHHHTTCCEEECC
T ss_pred cCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHcCCCEEEEe-CCCCCCH-HHHHHHHhCCCCEEEEe
Confidence 4455555554333322221 233 25678888888888887743 3 233 35778899999999994
No 488
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=81.40 E-value=4.4 Score=36.74 Aligned_cols=153 Identities=14% Similarity=0.178 Sum_probs=0.0
Q ss_pred HHHHHHcCcCCCCCeeEEEEe-----cChhhHHHHHHHcCCCEEEEccccc-------------ccccHHHHHHHHHHcC
Q 023494 104 PLVVDALRPVTDLPLDVHLMI-----VEPEQRVPDFIKAGADIVSVHCEQS-------------STIHLHRTLNQIKDLG 165 (281)
Q Consensus 104 ~~~I~~ir~~t~~~idaHLmv-----~dp~~~i~~~~~aGAd~Itvh~Ea~-------------~~~~i~~~l~~ik~~G 165 (281)
...++.|.+.++.|+.+|+=. .+..+.+..+.++|+..|.+-.-.. +.++..+-|+++++.-
T Consensus 72 ~~~~~~I~r~~~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~ 151 (298)
T 3eoo_A 72 LVDANRITNATNLPLLVDIDTGWGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDAR 151 (298)
T ss_dssp HHHHHHHHHHCCSCEEEECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhhcCCeEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhc
Q ss_pred CcEEEEECCCC----------CHHHHHHhhcc-CCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEe--
Q 023494 166 AKAGVVLNPAT----------SLSAIECVLDV-VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVD-- 232 (281)
Q Consensus 166 ~k~Glai~p~t----------~ie~~~~~l~~-vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VD-- 232 (281)
....+.|+-.| -+++.+.|.+. +|.|.+ ||... .+.++++.+-++ .++.+-
T Consensus 152 ~~~~~~I~ARTDa~~~~gldeai~Ra~ay~~AGAD~if~----~~~~~-------~ee~~~~~~~~~-----~Pl~~n~~ 215 (298)
T 3eoo_A 152 TDETFVIMARTDAAAAEGIDAAIERAIAYVEAGADMIFP----EAMKT-------LDDYRRFKEAVK-----VPILANLT 215 (298)
T ss_dssp SSTTSEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEEEE----CCCCS-------HHHHHHHHHHHC-----SCBEEECC
T ss_pred cCCCeEEEEeehhhhhcCHHHHHHHHHhhHhcCCCEEEe----CCCCC-------HHHHHHHHHHcC-----CCeEEEec
Q ss_pred -cCCChh-cHHHHHHcCCcEEEEcccccCC--CCHHHHHHHHHH
Q 023494 233 -GGVGPK-NAYKVIEAGANALVAGSAVFGA--KDYAEAIKGIKT 272 (281)
Q Consensus 233 -GGI~~e-~i~~~~~aGAD~~VvGSaIf~a--~dp~~~~~~l~~ 272 (281)
||-++. +..++.+.|+..++.|...+.+ ....+.++.|++
T Consensus 216 ~~g~tp~~~~~eL~~lGv~~v~~~~~~~raa~~a~~~~~~~i~~ 259 (298)
T 3eoo_A 216 EFGSTPLFTLDELKGANVDIALYCCGAYRAMNKAALNFYETVRR 259 (298)
T ss_dssp TTSSSCCCCHHHHHHTTCCEEEECSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCHHHHHHcCCeEEEEchHHHHHHHHHHHHHHHHHHH
No 489
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=81.38 E-value=8.1 Score=32.69 Aligned_cols=117 Identities=11% Similarity=-0.005 Sum_probs=67.8
Q ss_pred HHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCC-CCCeeEEEEecChhhHHHHHHHcCCCEE--EEcccc
Q 023494 72 LGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIVEPEQRVPDFIKAGADIV--SVHCEQ 148 (281)
Q Consensus 72 l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t-~~~idaHLmv~dp~~~i~~~~~aGAd~I--tvh~Ea 148 (281)
-.++++.+.++|+|.++++..-... |+-..-.+.++.+|+.. +.++.+ -+.++. ....+.++|+|+| +++.-.
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~~~~~-~~~~~~~~~i~~i~~~~~~~~v~~--~~~t~~-ea~~a~~~Gad~i~~~v~g~~ 165 (234)
T 1yxy_A 90 TMTEVDQLAALNIAVIAMDCTKRDR-HDGLDIASFIRQVKEKYPNQLLMA--DISTFD-EGLVAHQAGIDFVGTTLSGYT 165 (234)
T ss_dssp SHHHHHHHHTTTCSEEEEECCSSCC-TTCCCHHHHHHHHHHHCTTCEEEE--ECSSHH-HHHHHHHTTCSEEECTTTTSS
T ss_pred hHHHHHHHHHcCCCEEEEcccccCC-CCCccHHHHHHHHHHhCCCCeEEE--eCCCHH-HHHHHHHcCCCEEeeeccccC
Confidence 3567888999999999987443210 11001157888888753 455444 233443 3566789999999 566321
Q ss_pred cc-----cccHHHHHHHHHHcCCcEEEEECCCCCHHHHHHhhc-cCCEEEEE
Q 023494 149 SS-----TIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLD-VVDLVLIM 194 (281)
Q Consensus 149 ~~-----~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~-~vD~Ilvm 194 (281)
.. ..++ +.++.+++.++.+ ++..-=+..+.+.+++. .+|.|.+.
T Consensus 166 ~~~~~~~~~~~-~~i~~~~~~~ipv-ia~GGI~s~~~~~~~~~~Gad~v~vG 215 (234)
T 1yxy_A 166 PYSRQEAGPDV-ALIEALCKAGIAV-IAEGKIHSPEEAKKINDLGVAGIVVG 215 (234)
T ss_dssp TTSCCSSSCCH-HHHHHHHHTTCCE-EEESCCCSHHHHHHHHTTCCSEEEEC
T ss_pred CCCcCCCCCCH-HHHHHHHhCCCCE-EEECCCCCHHHHHHHHHCCCCEEEEc
Confidence 10 1123 4566666554333 33332234777777776 48988764
No 490
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=81.20 E-value=29 Score=30.76 Aligned_cols=172 Identities=13% Similarity=0.088 Sum_probs=96.6
Q ss_pred ccCccCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCH----HHHHHcCcC--CCCCeeEEEEecChhh---HHHHHHH
Q 023494 66 SANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGP----LVVDALRPV--TDLPLDVHLMIVEPEQ---RVPDFIK 136 (281)
Q Consensus 66 a~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~----~~I~~ir~~--t~~~idaHLmv~dp~~---~i~~~~~ 136 (281)
..|+..+++.++.+.+.|++-+-+ =|+.--..++.. ++++...+. -..|+.++.-.++..+ +.+.+.+
T Consensus 17 ~iD~~~l~~lv~~li~~Gv~gl~~---~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~ 93 (294)
T 2ehh_A 17 EVDYEALGNLIEFHVDNGTDAILV---CGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKE 93 (294)
T ss_dssp EECHHHHHHHHHHHHTTTCCEEEE---SSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHCCCCEEEE---CccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHh
Confidence 367778889999999999987643 243222223333 334443432 2378888887777654 4455678
Q ss_pred cCCCEEEEcccc---cccccHHHHHHHHHH-cCCcEEEEECCC-----CCHHHHHHhh-ccCCEEEEEeecCCCCCCccc
Q 023494 137 AGADIVSVHCEQ---SSTIHLHRTLNQIKD-LGAKAGVVLNPA-----TSLSAIECVL-DVVDLVLIMSVNPGFGGQSFI 206 (281)
Q Consensus 137 aGAd~Itvh~Ea---~~~~~i~~~l~~ik~-~G~k~Glai~p~-----t~ie~~~~~l-~~vD~IlvmsV~pG~~GQ~f~ 206 (281)
+|||.+.+..-. .+.+.+.+..+.+-+ .++.+.+=-+|. -+.+.+.++. +...++.+= +. .|
T Consensus 94 ~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgiK--ds--~g---- 165 (294)
T 2ehh_A 94 VGADGALVVVPYYNKPTQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKLASECENIVASK--ES--TP---- 165 (294)
T ss_dssp TTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEE--EC--CS----
T ss_pred cCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHHHHhhCCCEEEEE--eC--CC----
Confidence 899988775221 112234444444333 466666544442 3556777776 433444321 11 11
Q ss_pred hhHHHHHHHHHHHhhhcCCCCeEEEecCCChhcHHHHHHcCCcEEEEccc
Q 023494 207 ESQVKKISDLRRMCLEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSA 256 (281)
Q Consensus 207 ~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~~e~i~~~~~aGAD~~VvGSa 256 (281)
.+.++.++++..+ .++.+ ..| -. +.+-.....|++.+|.|.+
T Consensus 166 --d~~~~~~~~~~~~---~~f~v-~~G-~d-~~~~~~l~~G~~G~is~~a 207 (294)
T 2ehh_A 166 --NMDRISEIVKRLG---ESFSV-LSG-DD-SLTLPMMALGAKGVISVAN 207 (294)
T ss_dssp --CHHHHHHHHHHHC---TTSEE-EES-SG-GGHHHHHHTTCCEEEESGG
T ss_pred --CHHHHHHHHHhcC---CCeEE-EEC-cH-HHHHHHHHCCCCEEEeCHH
Confidence 2455555555443 23544 334 32 3455677899999999965
No 491
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=81.10 E-value=7.6 Score=32.78 Aligned_cols=117 Identities=8% Similarity=0.057 Sum_probs=65.3
Q ss_pred cChhhHHHHH--HHcCCCEEEEcccccccccHHHHHHHHHHc--CCcEEEEECCCCCHH-HHHHhhc-cCCEEEEEeecC
Q 023494 125 VEPEQRVPDF--IKAGADIVSVHCEQSSTIHLHRTLNQIKDL--GAKAGVVLNPATSLS-AIECVLD-VVDLVLIMSVNP 198 (281)
Q Consensus 125 ~dp~~~i~~~--~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~--G~k~Glai~p~t~ie-~~~~~l~-~vD~IlvmsV~p 198 (281)
.|+++-++.+ .+.|+|++-++.+-. ...--+.++.+|+. +..+.+.++.....+ .++.+.+ .+|+|.++.
T Consensus 16 ~~~~~~~~~~~~~~~~vd~ie~g~~~~-~~~G~~~i~~lr~~~~~~~i~ld~~l~d~p~~~~~~~~~aGad~i~vh~--- 91 (218)
T 3jr2_A 16 TNLTDAVAVASNVASYVDVIEVGTILA-FAEGMKAVSTLRHNHPNHILVCDMKTTDGGAILSRMAFEAGADWITVSA--- 91 (218)
T ss_dssp SSHHHHHHHHHHHGGGCSEEEECHHHH-HHHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHHTCSEEEEET---
T ss_pred CCHHHHHHHHHHhcCCceEEEeCcHHH-HhcCHHHHHHHHHhCCCCcEEEEEeecccHHHHHHHHHhcCCCEEEEec---
Confidence 4444433332 355899999986521 11112568888887 667877776554333 3344444 489997742
Q ss_pred CCCCCccchhHHHHHHHHHHHhhhcCCCCeEEE--ecCCChhcHHHHHHcCCcEEEEcc
Q 023494 199 GFGGQSFIESQVKKISDLRRMCLEKGVNPWIEV--DGGVGPKNAYKVIEAGANALVAGS 255 (281)
Q Consensus 199 G~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~V--DGGI~~e~i~~~~~aGAD~~VvGS 255 (281)
..+ ++++ +++.+.+++.| ....+ -|=-|++.+..+.+.|+|.+++..
T Consensus 92 -~~~----~~~~---~~~~~~~~~~g--~~~~~d~l~~~T~~~~~~~~~~g~d~v~~~~ 140 (218)
T 3jr2_A 92 -AAH----IATI---AACKKVADELN--GEIQIEIYGNWTMQDAKAWVDLGITQAIYHR 140 (218)
T ss_dssp -TSC----HHHH---HHHHHHHHHHT--CEEEEECCSSCCHHHHHHHHHTTCCEEEEEC
T ss_pred -CCC----HHHH---HHHHHHHHHhC--CccceeeeecCCHHHHHHHHHcCccceeeee
Confidence 222 2233 23333333333 34433 233467778888888999887753
No 492
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=80.87 E-value=14 Score=35.11 Aligned_cols=80 Identities=6% Similarity=-0.014 Sum_probs=43.6
Q ss_pred CCC-eeEEEEec----ChhhHHHHHHHcCCCEEEEccccccccc-------------------HHHHHHHHHHc-C-CcE
Q 023494 115 DLP-LDVHLMIV----EPEQRVPDFIKAGADIVSVHCEQSSTIH-------------------LHRTLNQIKDL-G-AKA 168 (281)
Q Consensus 115 ~~~-idaHLmv~----dp~~~i~~~~~aGAd~Itvh~Ea~~~~~-------------------i~~~l~~ik~~-G-~k~ 168 (281)
++| +.+-+-.. +.....+.+.++|+|+|++|.-.....+ ..+.+..+++. + ...
T Consensus 296 ~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iP 375 (443)
T 1tv5_A 296 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 375 (443)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCc
Confidence 467 66643322 2223466778999999999964210000 13567777765 2 223
Q ss_pred EEEECCCCCHHHHHHhhc-cCCEEEEE
Q 023494 169 GVVLNPATSLSAIECVLD-VVDLVLIM 194 (281)
Q Consensus 169 Glai~p~t~ie~~~~~l~-~vD~Ilvm 194 (281)
.+...-=+..+...+.+. .+|.|.+.
T Consensus 376 VIg~GGI~s~~DA~e~l~aGAd~Vqig 402 (443)
T 1tv5_A 376 IIASGGIFSGLDALEKIEAGASVCQLY 402 (443)
T ss_dssp EEEESSCCSHHHHHHHHHTTEEEEEES
T ss_pred EEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 334332244555555544 58988763
No 493
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=80.76 E-value=2.5 Score=40.07 Aligned_cols=121 Identities=12% Similarity=0.089 Sum_probs=67.2
Q ss_pred HHHHHHHHHcCCCeEEEEeeeCc-----ccc--c--------------ccCCHHHHHHcCcCC------CCCeeEEEEe-
Q 023494 73 GEQVKAVELAGCDWIHVDVMDGR-----FVP--N--------------ITIGPLVVDALRPVT------DLPLDVHLMI- 124 (281)
Q Consensus 73 ~~~l~~l~~~G~d~iHiDImDG~-----fvp--n--------------~~~G~~~I~~ir~~t------~~~idaHLmv- 124 (281)
.++.+++.++|.|.|+|-.--|- +.| | ..|-.++++++|+.. +.++-+-|=.
T Consensus 173 ~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~ 252 (419)
T 3l5a_A 173 RDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPE 252 (419)
T ss_dssp HHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECSC
T ss_pred HHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEecccc
Confidence 34445677899999877533221 012 2 134566788887743 4566664422
Q ss_pred -----------cChhhHHHHHHH-cCCCEEEEccccc----------ccccHHHHHHHHHHc-CCcEEEEECCC-CCHHH
Q 023494 125 -----------VEPEQRVPDFIK-AGADIVSVHCEQS----------STIHLHRTLNQIKDL-GAKAGVVLNPA-TSLSA 180 (281)
Q Consensus 125 -----------~dp~~~i~~~~~-aGAd~Itvh~Ea~----------~~~~i~~~l~~ik~~-G~k~Glai~p~-t~ie~ 180 (281)
.+...+++.+.+ +|+|++++|.-.. ....-...++.+|+. +-++=|..+-. +..+.
T Consensus 253 ~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI~~GgI~t~e~ 332 (419)
T 3l5a_A 253 ETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIASGGINSPES 332 (419)
T ss_dssp EEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEEECSSCCSHHH
T ss_pred cccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEEEECCCCCHHH
Confidence 122345667788 9999999996310 000012345666653 21222333333 46677
Q ss_pred HHHhhccCCEEEE
Q 023494 181 IECVLDVVDLVLI 193 (281)
Q Consensus 181 ~~~~l~~vD~Ilv 193 (281)
.++.+..+|.|.+
T Consensus 333 Ae~~L~~aDlVai 345 (419)
T 3l5a_A 333 ALDALQHADMVGM 345 (419)
T ss_dssp HHHHGGGCSEEEE
T ss_pred HHHHHHhCCcHHH
Confidence 7777666998876
No 494
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=80.49 E-value=3.7 Score=35.34 Aligned_cols=130 Identities=12% Similarity=0.050 Sum_probs=0.0
Q ss_pred CceEeEEEeccCc---cCHHHHHHHHHHcCCCeEEEEeeeCcccccccCCHHHHHHcCcCCCCCeeEEEEe---------
Q 023494 57 DIIVSPSILSANF---AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMI--------- 124 (281)
Q Consensus 57 ~~~i~pSila~D~---~~l~~~l~~l~~~G~d~iHiDImDG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv--------- 124 (281)
+++|+-+.++.-- ..+++.++.+.+.|.+.+++...+....+ ......++++-+..++.+.+|.-.
T Consensus 1 Mmkig~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~--~~~~~~~~~~l~~~gl~~~~~~~~~~~~~l~~~ 78 (290)
T 2qul_A 1 MNKVGMFYTYWSTEWMVDFPATAKRIAGLGFDLMEISLGEFHNLS--DAKKRELKAVADDLGLTVMCCIGLKSEYDFASP 78 (290)
T ss_dssp CCCEEEETTSSCSSSCCCHHHHHHHHHHTTCSEEEEESTTGGGSC--HHHHHHHHHHHHHHTCEEEEEEEECGGGCTTCS
T ss_pred CcceeEEeeeecCcccccHHHHHHHHHHhCCCEEEEecCCccccc--hhhHHHHHHHHHHcCCceEEecCCCCCCCCCCC
Q ss_pred ---------cChhhHHHHHHHcCCCEEEEcc-------------------cccccccHHHHHHHHHHcCCcEEEEECCC-
Q 023494 125 ---------VEPEQRVPDFIKAGADIVSVHC-------------------EQSSTIHLHRTLNQIKDLGAKAGVVLNPA- 175 (281)
Q Consensus 125 ---------~dp~~~i~~~~~aGAd~Itvh~-------------------Ea~~~~~i~~~l~~ik~~G~k~Glai~p~- 175 (281)
..-.+.++.+.+.|+..|.++. +.. .+.+.++.+.++++|+++++--.+.
T Consensus 79 d~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~l~~l~~~a~~~gv~l~lEn~~~~ 157 (290)
T 2qul_A 79 DKSVRDAGTEYVKRLLDDCHLLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRA-IESVRRVIKVAEDYGIIYALEVVNRF 157 (290)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHH-HHHHHTTHHHHHHHTCEEEEECCCTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCCcccHHHHHHHH-HHHHHHHHHHHHHcCCEEEEEeCccc
Q ss_pred -----CCHHHHHHhhccCC
Q 023494 176 -----TSLSAIECVLDVVD 189 (281)
Q Consensus 176 -----t~ie~~~~~l~~vD 189 (281)
...+.+..+++.++
T Consensus 158 ~~~~~~~~~~~~~l~~~~~ 176 (290)
T 2qul_A 158 EQWLCNDAKEAIAFADAVD 176 (290)
T ss_dssp TCSSCCSHHHHHHHHHHHC
T ss_pred cccccCCHHHHHHHHHHcC
No 495
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=80.38 E-value=6.1 Score=33.49 Aligned_cols=111 Identities=17% Similarity=0.078 Sum_probs=0.0
Q ss_pred ccCHHHHHHHHHHcCCCeEEEEee---eCcccccccCCHHHHHHcCcCCCCCeeEEEEecChhhH-HHHHHHcCCCEEEE
Q 023494 69 FAKLGEQVKAVELAGCDWIHVDVM---DGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQR-VPDFIKAGADIVSV 144 (281)
Q Consensus 69 ~~~l~~~l~~l~~~G~d~iHiDIm---DG~fvpn~~~G~~~I~~ir~~t~~~idaHLmv~dp~~~-i~~~~~aGAd~Itv 144 (281)
+-|.-.+++.+.+.|+|++++||. ||..|-......+ .-.+.+ + ++.+.+..
T Consensus 21 PENTl~Af~~A~~~G~d~iE~DV~lT~Dg~lVv~HD~~l~---------------~g~v~~---~t~~eL~~l~------ 76 (224)
T 1vd6_A 21 KENTLESFRLALEAGLDGVELDVWPTRDGVFAVRHDPDTP---------------LGPVFQ---VDYADLKAQE------ 76 (224)
T ss_dssp CTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSCSEET---------------TEEGGG---SCHHHHHHHS------
T ss_pred CcchHHHHHHHHHcCCCEEEEEeeEecCCcEEEECCCccC---------------CCChhh---CCHHHHHhcC------
Q ss_pred cccccccccHHHHHHHHH-HcCCcEEEEECCCCC-----HHHHHHhhccCCEEEEEeecCCCCCCccchhHHHHHHHH
Q 023494 145 HCEQSSTIHLHRTLNQIK-DLGAKAGVVLNPATS-----LSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDL 216 (281)
Q Consensus 145 h~Ea~~~~~i~~~l~~ik-~~G~k~Glai~p~t~-----ie~~~~~l~~vD~IlvmsV~pG~~GQ~f~~~~l~kI~~l 216 (281)
+ ...+++++++.++ +.++.+-+.+..... .+.+...+...+.+++ ++|.+..+.+++++
T Consensus 77 --~--~iptL~evl~~~~~~~~~~l~iEiK~~~~~~~~~~~~v~~~l~~~~~v~i---------~Sf~~~~l~~~~~~ 141 (224)
T 1vd6_A 77 --P--DLPRLEEVLALKEAFPQAVFNVELKSFPGLGEEAARRLAALLRGREGVWV---------SSFDPLALLALRKA 141 (224)
T ss_dssp --T--TCCBHHHHHGGGGTCTTCEEEEEECCCTTSHHHHHHHHHHHTTTCSSEEE---------EESCHHHHHHHHHH
T ss_pred --C--CCCCHHHHHHhhhccCCceEEEEECCCCCccHHHHHHHHHHHhcCCcEEE---------EeCCHHHHHHHHHH
No 496
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=80.33 E-value=12 Score=30.05 Aligned_cols=105 Identities=16% Similarity=0.113 Sum_probs=61.2
Q ss_pred EEEEc-ccccccccH-HHHHHHHHHcCCcEEEEECCCCCHHHHHHhhccCCEEEEEeecCCC--------CCCccchhHH
Q 023494 141 IVSVH-CEQSSTIHL-HRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGF--------GGQSFIESQV 210 (281)
Q Consensus 141 ~Itvh-~Ea~~~~~i-~~~l~~ik~~G~k~Glai~p~t~ie~~~~~l~~vD~IlvmsV~pG~--------~GQ~f~~~~l 210 (281)
.|++. +|..-..++ .++++.+++.|+.+.+..|...+.+.++.+++.+|.|.+ +++ |. .|..+ ...+
T Consensus 6 ~v~~tGGEPll~~~~~~~l~~~~~~~g~~~~l~TNG~l~~~~~~~l~~~~d~v~i-sld-~~~~~~~~~~~g~~~-~~i~ 82 (182)
T 3can_A 6 GVTFCGGEPLLHPEFLIDILKRCGQQGIHRAVDTTLLARKETVDEVMRNCELLLI-DLK-SMDSTVHQTFCDVPN-ELIL 82 (182)
T ss_dssp CEEECSSTGGGSHHHHHHHHHHHHHTTCCEEEECTTCCCHHHHHHHHHTCSEEEE-ECC-CSCHHHHHHHHSSCS-HHHH
T ss_pred EEEEEcccccCCHHHHHHHHHHHHHCCCcEEEECCCCCCHHHHHHHHhhCCEEEE-ECC-CCCHHHHHHHhCCCH-HHHH
Confidence 34444 564212234 589999999999999999876566777777777888764 554 22 12222 4445
Q ss_pred HHHHHHHHHhhhcCCCC--eEEEecCCC--hhcHH----HHHHc-CC-cEEE
Q 023494 211 KKISDLRRMCLEKGVNP--WIEVDGGVG--PKNAY----KVIEA-GA-NALV 252 (281)
Q Consensus 211 ~kI~~lr~l~~~~~~~~--~I~VDGGI~--~e~i~----~~~~a-GA-D~~V 252 (281)
+.|+.+++ .+..+ .+.+.-|+| .+.+. .+.+. |+ +.+.
T Consensus 83 ~~i~~l~~----~g~~v~i~~~v~~~~n~n~~~~~~~~~~~~~~~g~~~~~~ 130 (182)
T 3can_A 83 KNIRRVAE----ADFPYYIRIPLIEGVNADEKNIKLSAEFLASLPRHPEIIN 130 (182)
T ss_dssp HHHHHHHH----TTCCEEEEEEECBTTTCSHHHHHHHHHHHHHSSSCCSEEE
T ss_pred HHHHHHHh----CCCeEEEEEEEECCCCCCHHHHHHHHHHHHhCcCccceEE
Confidence 55555543 23333 344577765 34443 34455 87 5443
No 497
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=80.33 E-value=23 Score=29.17 Aligned_cols=109 Identities=19% Similarity=0.169 Sum_probs=62.2
Q ss_pred CCCEEEEcc-ccccccc-HHHHHHHHHHcCCcEEEEECCCC--CHHHHHHhhccCCEEEEEeecCCC-------CCCccc
Q 023494 138 GADIVSVHC-EQSSTIH-LHRTLNQIKDLGAKAGVVLNPAT--SLSAIECVLDVVDLVLIMSVNPGF-------GGQSFI 206 (281)
Q Consensus 138 GAd~Itvh~-Ea~~~~~-i~~~l~~ik~~G~k~Glai~p~t--~ie~~~~~l~~vD~IlvmsV~pG~-------~GQ~f~ 206 (281)
+...|++.+ |.....+ +.++++.+++.|+++.+..|... ..+.+..+++.+|.|.+ +++-+- .|..+
T Consensus 69 ~~~~i~~~GGEP~l~~~~l~~l~~~~~~~~~~i~i~Tng~~~~~~~~~~~l~~~~~~v~i-sld~~~~~~~~~~~~~~~- 146 (245)
T 3c8f_A 69 SGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVTDLVML-DLKQMNDEIHQNLVGVSN- 146 (245)
T ss_dssp TTCEEEEEESCGGGGHHHHHHHHHHHHTTTCCEEEEECCCCCCCCHHHHHHHHTCSEEEE-ECCCSSHHHHHHHHSSCS-
T ss_pred CCCeEEEECCCcCCCHHHHHHHHHHHHHcCCcEEEEeCCCcCcCHHHHHHHHHhCCEEEE-eCCCCCHHHhhhccCCCH-
Confidence 356777764 4221223 57899999999999999888654 45667777777887654 554221 12223
Q ss_pred hhHHHHHHHHHHHhhhcCCCCeE--EEecCCCh--hc----HHHHHHcCC-cEEE
Q 023494 207 ESQVKKISDLRRMCLEKGVNPWI--EVDGGVGP--KN----AYKVIEAGA-NALV 252 (281)
Q Consensus 207 ~~~l~kI~~lr~l~~~~~~~~~I--~VDGGI~~--e~----i~~~~~aGA-D~~V 252 (281)
...++.|+.+++ .+..+.+ .+..|.+. ++ +..+.+.|+ +.+-
T Consensus 147 ~~~~~~i~~l~~----~g~~v~i~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (245)
T 3c8f_A 147 HRTLEFAKYLAN----KNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIE 197 (245)
T ss_dssp HHHHHHHHHHHH----HTCCEEEEEEECTTTTCCHHHHHHHHHHHHHHCCEEEEE
T ss_pred HHHHHHHHHHHh----cCCEEEEEEeecCCCCCCHHHHHHHHHHHHhcCCCceeE
Confidence 444555555543 3333333 35667653 33 445566775 4333
No 498
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=80.30 E-value=8.6 Score=36.19 Aligned_cols=174 Identities=8% Similarity=0.062 Sum_probs=103.3
Q ss_pred EeEEEeccCccCHHHHHHHHHHcCCCeEEEEeeeCccccc--------------ccCCHHHHHHcC--cCCCCCeeEEEE
Q 023494 60 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPN--------------ITIGPLVVDALR--PVTDLPLDVHLM 123 (281)
Q Consensus 60 i~pSila~D~~~l~~~l~~l~~~G~d~iHiDImDG~fvpn--------------~~~G~~~I~~ir--~~t~~~idaHLm 123 (281)
+.|.|+--|+.++++..+.+.... -|- -|...+. -..|..+-+-|- ....++.-+++-
T Consensus 78 l~p~LiG~dp~~ie~~~~~l~~~~-~~~-----~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLGG~~r~~v~~y~~~~ 151 (422)
T 3tji_A 78 LQPLMIGRDANNIEDLWQMMNVNA-YWR-----NGPLMNNAISGVDMALWDIKGQLAGMPLYQLFGGKSRDAIPAYSHAS 151 (422)
T ss_dssp HHHHHTTSBTTCHHHHHHHHHHTT-SSC-----CSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCSSSCEEEEEEEE
T ss_pred HHHHhCCCCcccHHHHHHHHHHhh-hcc-----CCchHHHHHHHHHHHHHHHHHHHhCCcHHHHcCCCCCCeEEEEEEeC
Confidence 667777778888887767666532 110 0111110 011222222221 112356666766
Q ss_pred ecChhhHHH---HHHHcCCCEEEEcccccc-----------------------cccHHHHHHHHHHc---CCcEEEEECC
Q 023494 124 IVEPEQRVP---DFIKAGADIVSVHCEQSS-----------------------TIHLHRTLNQIKDL---GAKAGVVLNP 174 (281)
Q Consensus 124 v~dp~~~i~---~~~~aGAd~Itvh~Ea~~-----------------------~~~i~~~l~~ik~~---G~k~Glai~p 174 (281)
..+|+.+.+ .+.+.|...+-+..-... .+...+.++++|+. ++.+.+..|.
T Consensus 152 ~~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~ 231 (422)
T 3tji_A 152 GETLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALREKYGWKLHILHDVHE 231 (422)
T ss_dssp ESSHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHCSSSEEEEECTT
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHHHHHcCCCCEEEEECCC
Confidence 778887654 456789999887642100 01234567777774 5677788888
Q ss_pred CCCHHHHHHhhcc-----CCEEEEEeecCCCCCCccchhHHHHHHHHHHHhhhcCCCCeEEEecCCC-hhcHHHHHHcC-
Q 023494 175 ATSLSAIECVLDV-----VDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLEKGVNPWIEVDGGVG-PKNAYKVIEAG- 247 (281)
Q Consensus 175 ~t~ie~~~~~l~~-----vD~IlvmsV~pG~~GQ~f~~~~l~kI~~lr~l~~~~~~~~~I~VDGGI~-~e~i~~~~~aG- 247 (281)
....+....+++. +++| .|++.+..++-++++++.. .++|+.|+.+. .+.+..+++.|
T Consensus 232 ~~~~~~A~~~~~~Le~~~i~~i----------EqP~~~~d~~~~~~l~~~~-----~iPIa~dE~~~~~~~~~~ll~~ga 296 (422)
T 3tji_A 232 RLFPQQAVQLAKQLEPFQPYFI----------EDILPPQQSAWLEQVRQQS-----CVPLALGELFNNPAEWHDLIVNRR 296 (422)
T ss_dssp CSCHHHHHHHHHHHGGGCCSEE----------ECCSCGGGGGGHHHHHHHC-----CCCEEECTTCCSGGGTHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHhhCCCeE----------ECCCChhhHHHHHHHHhhC-----CCCEEEeCCcCCHHHHHHHHhcCC
Confidence 8777666555432 3333 2556555555666666543 47999999998 78888888876
Q ss_pred CcEEEEc
Q 023494 248 ANALVAG 254 (281)
Q Consensus 248 AD~~VvG 254 (281)
+|++.+-
T Consensus 297 ~d~v~~k 303 (422)
T 3tji_A 297 IDFIRCH 303 (422)
T ss_dssp CSEECCC
T ss_pred CCEEecC
Confidence 7877654
No 499
>3ppg_A 5-methyltetrahydropteroyltriglutamate--homocystei methyltransferase; cobalamin-independent, surface entropy reduction; 1.98A {Candida albicans} PDB: 3ppf_A 3pph_A 3ppc_A
Probab=80.28 E-value=5.4 Score=40.91 Aligned_cols=95 Identities=19% Similarity=0.240 Sum_probs=47.7
Q ss_pred HHHHHHHHHHcCCCeEEEEeeeCc-ccccccCCH-------HHHHHcCcC-CCCC--eeEEEEecChhhHHHHHHHcCCC
Q 023494 72 LGEQVKAVELAGCDWIHVDVMDGR-FVPNITIGP-------LVVDALRPV-TDLP--LDVHLMIVEPEQRVPDFIKAGAD 140 (281)
Q Consensus 72 l~~~l~~l~~~G~d~iHiDImDG~-fvpn~~~G~-------~~I~~ir~~-t~~~--idaHLmv~dp~~~i~~~~~aGAd 140 (281)
+.++++.+.++|+++|++|--... ..|.- -|. ..++.++.. .+.+ ..+|+-++......+.+.+.++|
T Consensus 618 ~r~Ei~~L~~AG~r~IQiDEPal~e~l~~r-~g~d~~~~l~~av~a~n~a~~g~p~d~~I~tHiC~Gnf~~~~I~~l~aD 696 (789)
T 3ppg_A 618 LRDEVNDLEGAGITVIQVDEPAIREGLPLR-AGKERSDYLNWAAQSFRVATSGVENSTQIHSHFCYSDLDPNHIKALDAD 696 (789)
T ss_dssp HHHHHHHHHHTTCCEEEEECTTTGGGSCSS-SSHHHHHHHHHHHHHHHHHHSSSCTTSEEEEECC---CCHHHHHHHCCS
T ss_pred HHHHHHHHHHcCCCEEEEcccchhhccccc-ccCCHHHHHHHHHHHHHHHHhcCCCCcEEEEeccCCCCChhHHHhCCCC
Confidence 457778889999999999932110 01110 011 134444432 2222 33444443221112667789999
Q ss_pred EEEEcccccccccHHHHHHHHHHcCCcEEE
Q 023494 141 IVSVHCEQSSTIHLHRTLNQIKDLGAKAGV 170 (281)
Q Consensus 141 ~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Gl 170 (281)
.+++-+ + +... .+.++.+++.|.++|+
T Consensus 697 ~islE~-~-~Rs~-~e~L~~~~~~~k~V~l 723 (789)
T 3ppg_A 697 VVSIEF-S-KKDD-PNYIQEFSEYPNHIGL 723 (789)
T ss_dssp EEEEC------------CGGGGGCCSEEEE
T ss_pred EEEEec-C-CCcc-hHHHHHHHhcCCeEEe
Confidence 999885 3 1222 3556666666777766
No 500
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=79.94 E-value=2.5 Score=38.06 Aligned_cols=84 Identities=12% Similarity=0.172 Sum_probs=57.3
Q ss_pred HHHHHcCcC-CCCCeeEEEEecChhhHHHHHHHcCCCEEEEcccccccccHHHHHHHHHHcCCcEEEEECCCCCHHHHHH
Q 023494 105 LVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIEC 183 (281)
Q Consensus 105 ~~I~~ir~~-t~~~idaHLmv~dp~~~i~~~~~aGAd~Itvh~Ea~~~~~i~~~l~~ik~~G~k~Glai~p~t~ie~~~~ 183 (281)
..++..|+. +..++.+ -+.+. .-++.+.++|+|+|-+|--. .+++.+.++.+++.+.++-+...-+-..+.+.+
T Consensus 183 ~av~~ar~~~~~~~I~V--ev~t~-eea~eal~aGaD~I~LDn~~--~~~~~~~v~~l~~~~~~v~ieaSGGIt~~~i~~ 257 (284)
T 1qpo_A 183 DALRAVRNAAPDLPCEV--EVDSL-EQLDAVLPEKPELILLDNFA--VWQTQTAVQRRDSRAPTVMLESSGGLSLQTAAT 257 (284)
T ss_dssp HHHHHHHHHCTTSCEEE--EESSH-HHHHHHGGGCCSEEEEETCC--HHHHHHHHHHHHHHCTTCEEEEESSCCTTTHHH
T ss_pred HHHHHHHHhCCCCCEEE--EeCCH-HHHHHHHHcCCCEEEECCCC--HHHHHHHHHHhhccCCCeEEEEECCCCHHHHHH
Confidence 467777765 3235555 33343 35667788999999999763 566788888888755556666665656667778
Q ss_pred hhcc-CCEEEE
Q 023494 184 VLDV-VDLVLI 193 (281)
Q Consensus 184 ~l~~-vD~Ilv 193 (281)
|... +|+|.+
T Consensus 258 ~a~tGVD~isv 268 (284)
T 1qpo_A 258 YAETGVDYLAV 268 (284)
T ss_dssp HHHTTCSEEEC
T ss_pred HHhcCCCEEEE
Confidence 8775 999975
Done!