BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 023495
         (281 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359485043|ref|XP_002266645.2| PREDICTED: leucine-rich repeat-containing protein 40-like [Vitis
           vinifera]
          Length = 351

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 221/281 (78%), Positives = 257/281 (91%), Gaps = 2/281 (0%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPESLTARLLNVV+LDVHSNQLK LPNSIGCLSKLKVL++SGNL+++LPKTIENCRSLEE
Sbjct: 72  IPESLTARLLNVVILDVHSNQLKSLPNSIGCLSKLKVLNISGNLIQNLPKTIENCRSLEE 131

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LNANFN+L  LPDTIGFEL+N+K LS+N NK+++LP S +HLTSL+VLDARLNCL++LPE
Sbjct: 132 LNANFNQLTMLPDTIGFELLNIKKLSVNSNKLMLLPSSTSHLTSLQVLDARLNCLRALPE 191

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           DLENLINL+VLN+SQNFQYLETLPYSIGLLMSLVELD SYN+ITTLPDS+GCL+KLQKL 
Sbjct: 192 DLENLINLQVLNVSQNFQYLETLPYSIGLLMSLVELDASYNRITTLPDSMGCLKKLQKLC 251

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHK-SPKKKSWVGKLVKYGTFNGALRNHR 240
           +EGNPLVSPPM+VVEQG+ AVK YLSEKM   H+ SPKKKSW+GKLV+YGTFNG   N  
Sbjct: 252 VEGNPLVSPPMEVVEQGMQAVKEYLSEKMTAAHRCSPKKKSWIGKLVRYGTFNGT-NNAS 310

Query: 241 SEERERFIMSDFRAIDGLASPRHIGMFSPRRLFSPRSYFTK 281
            EERE F+ SD+R+I+GLA+PR +GMFSPRRLFSPR+YF+K
Sbjct: 311 REEREGFLRSDYRSIEGLATPRSVGMFSPRRLFSPRNYFSK 351



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 95/160 (59%), Gaps = 3/160 (1%)

Query: 36  LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           L+++D+SG  L++LP    N  ++ +L+   N L+ +P+++   L+N+  L ++ N++  
Sbjct: 36  LEIVDLSGMSLDALPNPSLNLAAICKLDLCNNNLQNIPESLTARLLNVVILDVHSNQLKS 95

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL-LMSL 154
           LP S+  L+ L+VL+   N +++LP+ +EN  +LE LN   NF  L  LP +IG  L+++
Sbjct: 96  LPNSIGCLSKLKVLNISGNLIQNLPKTIENCRSLEELN--ANFNQLTMLPDTIGFELLNI 153

Query: 155 VELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            +L V+ NK+  LP S   L  LQ L    N L + P D+
Sbjct: 154 KKLSVNSNKLMLLPSSTSHLTSLQVLDARLNCLRALPEDL 193



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 73/125 (58%), Gaps = 3/125 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+P+++   LLN+  L V+SN+L  LP+S   L+ L+VLD   N L +LP+ +EN  +L+
Sbjct: 141 MLPDTIGFELLNIKKLSVNSNKLMLLPSSTSHLTSLQVLDARLNCLRALPEDLENLINLQ 200

Query: 61  ELNA--NFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKS 118
            LN   NF  L  LP +IG  L++L  L  + N+I  LP S+  L  L+ L    N L S
Sbjct: 201 VLNVSQNFQYLETLPYSIGL-LMSLVELDASYNRITTLPDSMGCLKKLQKLCVEGNPLVS 259

Query: 119 LPEDL 123
            P ++
Sbjct: 260 PPMEV 264


>gi|147771824|emb|CAN71340.1| hypothetical protein VITISV_043793 [Vitis vinifera]
          Length = 355

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 221/281 (78%), Positives = 257/281 (91%), Gaps = 2/281 (0%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPESLTARLLNVV+LDVHSNQLK LPNSIGCLSKLKVL++SGNL+++LPKTIENCRSLEE
Sbjct: 76  IPESLTARLLNVVILDVHSNQLKSLPNSIGCLSKLKVLNISGNLIQNLPKTIENCRSLEE 135

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LNANFN+L  LPDTIGFEL+N+K LS+N NK+++LP S +HLTSL+VLDARLNCL++LPE
Sbjct: 136 LNANFNQLTMLPDTIGFELLNIKKLSVNSNKLMLLPSSTSHLTSLQVLDARLNCLRALPE 195

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           DLENLINL+VLN+SQNFQYLETLPYSIGLLMSLVELD SYN+ITTLPDS+GCL+KLQKL 
Sbjct: 196 DLENLINLQVLNVSQNFQYLETLPYSIGLLMSLVELDASYNRITTLPDSMGCLKKLQKLC 255

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHK-SPKKKSWVGKLVKYGTFNGALRNHR 240
           +EGNPLVSPPM+VVEQG+ AVK YLSEKM   H+ SPKKKSW+GKLV+YGTFNG   N  
Sbjct: 256 VEGNPLVSPPMEVVEQGMQAVKEYLSEKMTAAHRCSPKKKSWIGKLVRYGTFNGT-NNAS 314

Query: 241 SEERERFIMSDFRAIDGLASPRHIGMFSPRRLFSPRSYFTK 281
            EERE F+ SD+R+I+GLA+PR +GMFSPRRLFSPR+YF+K
Sbjct: 315 REEREGFLRSDYRSIEGLATPRSVGMFSPRRLFSPRNYFSK 355



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 95/160 (59%), Gaps = 3/160 (1%)

Query: 36  LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           L+++D+SG  L++LP    N  ++ +L+   N L+ +P+++   L+N+  L ++ N++  
Sbjct: 40  LEIVDLSGMSLDALPNPSLNLAAICKLDLCNNNLQNIPESLTARLLNVVILDVHSNQLKS 99

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL-LMSL 154
           LP S+  L+ L+VL+   N +++LP+ +EN  +LE LN   NF  L  LP +IG  L+++
Sbjct: 100 LPNSIGCLSKLKVLNISGNLIQNLPKTIENCRSLEELN--ANFNQLTMLPDTIGFELLNI 157

Query: 155 VELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            +L V+ NK+  LP S   L  LQ L    N L + P D+
Sbjct: 158 KKLSVNSNKLMLLPSSTSHLTSLQVLDARLNCLRALPEDL 197



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 73/125 (58%), Gaps = 3/125 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+P+++   LLN+  L V+SN+L  LP+S   L+ L+VLD   N L +LP+ +EN  +L+
Sbjct: 145 MLPDTIGFELLNIKKLSVNSNKLMLLPSSTSHLTSLQVLDARLNCLRALPEDLENLINLQ 204

Query: 61  ELNA--NFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKS 118
            LN   NF  L  LP +IG  L++L  L  + N+I  LP S+  L  L+ L    N L S
Sbjct: 205 VLNVSQNFQYLETLPYSIGL-LMSLVELDASYNRITTLPDSMGCLKKLQKLCVEGNPLVS 263

Query: 119 LPEDL 123
            P ++
Sbjct: 264 PPMEV 268


>gi|297735442|emb|CBI17882.3| unnamed protein product [Vitis vinifera]
          Length = 308

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 221/281 (78%), Positives = 257/281 (91%), Gaps = 2/281 (0%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPESLTARLLNVV+LDVHSNQLK LPNSIGCLSKLKVL++SGNL+++LPKTIENCRSLEE
Sbjct: 29  IPESLTARLLNVVILDVHSNQLKSLPNSIGCLSKLKVLNISGNLIQNLPKTIENCRSLEE 88

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LNANFN+L  LPDTIGFEL+N+K LS+N NK+++LP S +HLTSL+VLDARLNCL++LPE
Sbjct: 89  LNANFNQLTMLPDTIGFELLNIKKLSVNSNKLMLLPSSTSHLTSLQVLDARLNCLRALPE 148

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           DLENLINL+VLN+SQNFQYLETLPYSIGLLMSLVELD SYN+ITTLPDS+GCL+KLQKL 
Sbjct: 149 DLENLINLQVLNVSQNFQYLETLPYSIGLLMSLVELDASYNRITTLPDSMGCLKKLQKLC 208

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHK-SPKKKSWVGKLVKYGTFNGALRNHR 240
           +EGNPLVSPPM+VVEQG+ AVK YLSEKM   H+ SPKKKSW+GKLV+YGTFNG   N  
Sbjct: 209 VEGNPLVSPPMEVVEQGMQAVKEYLSEKMTAAHRCSPKKKSWIGKLVRYGTFNGT-NNAS 267

Query: 241 SEERERFIMSDFRAIDGLASPRHIGMFSPRRLFSPRSYFTK 281
            EERE F+ SD+R+I+GLA+PR +GMFSPRRLFSPR+YF+K
Sbjct: 268 REEREGFLRSDYRSIEGLATPRSVGMFSPRRLFSPRNYFSK 308



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 87/150 (58%), Gaps = 3/150 (2%)

Query: 46  LESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTS 105
           L++LP    N  ++ +L+   N L+ +P+++   L+N+  L ++ N++  LP S+  L+ 
Sbjct: 3   LDALPNPSLNLAAICKLDLCNNNLQNIPESLTARLLNVVILDVHSNQLKSLPNSIGCLSK 62

Query: 106 LRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL-LMSLVELDVSYNKI 164
           L+VL+   N +++LP+ +EN  +LE LN   NF  L  LP +IG  L+++ +L V+ NK+
Sbjct: 63  LKVLNISGNLIQNLPKTIENCRSLEELN--ANFNQLTMLPDTIGFELLNIKKLSVNSNKL 120

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP S   L  LQ L    N L + P D+
Sbjct: 121 MLLPSSTSHLTSLQVLDARLNCLRALPEDL 150



 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 73/125 (58%), Gaps = 3/125 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+P+++   LLN+  L V+SN+L  LP+S   L+ L+VLD   N L +LP+ +EN  +L+
Sbjct: 98  MLPDTIGFELLNIKKLSVNSNKLMLLPSSTSHLTSLQVLDARLNCLRALPEDLENLINLQ 157

Query: 61  ELNA--NFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKS 118
            LN   NF  L  LP +IG  L++L  L  + N+I  LP S+  L  L+ L    N L S
Sbjct: 158 VLNVSQNFQYLETLPYSIGL-LMSLVELDASYNRITTLPDSMGCLKKLQKLCVEGNPLVS 216

Query: 119 LPEDL 123
            P ++
Sbjct: 217 PPMEV 221


>gi|255554408|ref|XP_002518243.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223542590|gb|EEF44129.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 353

 Score =  455 bits (1171), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 225/283 (79%), Positives = 255/283 (90%), Gaps = 5/283 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPESLTARLLN+V+LDVHSNQLK LPNSIGCLSKLKVL+V+GNLL  LPKTIENCRSLEE
Sbjct: 70  IPESLTARLLNIVILDVHSNQLKSLPNSIGCLSKLKVLNVAGNLLACLPKTIENCRSLEE 129

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LNANFNKL  LP+TIGFEL+NLK LS+N NK+V LP S+THLTSL+ LDARLN L+SLPE
Sbjct: 130 LNANFNKLSVLPNTIGFELVNLKKLSVNSNKLVFLPHSITHLTSLKTLDARLNNLRSLPE 189

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           DLENLINL+VLN+SQNFQYLETLPYSIGLL SL+ELD+SYN+IT+LP+SIGCLRKLQKLS
Sbjct: 190 DLENLINLKVLNVSQNFQYLETLPYSIGLLFSLIELDISYNRITSLPNSIGCLRKLQKLS 249

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSP-KKKSWVGKLVKYGTFNGALRNH- 239
           +EGNPLVSPPM+VVEQGL  VK YLSEKMN  HKSP KKKSWVGKLVKYGTFNG+ RN  
Sbjct: 250 VEGNPLVSPPMEVVEQGLHTVKEYLSEKMNAGHKSPQKKKSWVGKLVKYGTFNGSTRNQI 309

Query: 240 ---RSEERERFIMSDFRAIDGLASPRHIGMFSPRRLFSPRSYF 279
               +EER+ FIMS++R+IDGLASP ++GMFSPRRLFSP++ F
Sbjct: 310 NSTNNEERKAFIMSEYRSIDGLASPSYMGMFSPRRLFSPKNIF 352



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 96/161 (59%), Gaps = 3/161 (1%)

Query: 35  KLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
           KL+++D+SG  L++LP    N  ++ +L+ + N L+ +P+++   L+N+  L ++ N++ 
Sbjct: 33  KLEIVDLSGMSLDTLPSPSLNLATICKLDLSNNNLQSIPESLTARLLNIVILDVHSNQLK 92

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL-LMS 153
            LP S+  L+ L+VL+   N L  LP+ +EN  +LE LN   NF  L  LP +IG  L++
Sbjct: 93  SLPNSIGCLSKLKVLNVAGNLLACLPKTIENCRSLEELN--ANFNKLSVLPNTIGFELVN 150

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L +L V+ NK+  LP SI  L  L+ L    N L S P D+
Sbjct: 151 LKKLSVNSNKLVFLPHSITHLTSLKTLDARLNNLRSLPEDL 191



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/125 (40%), Positives = 72/125 (57%), Gaps = 3/125 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P ++   L+N+  L V+SN+L  LP+SI  L+ LK LD   N L SLP+ +EN  +L+
Sbjct: 139 VLPNTIGFELVNLKKLSVNSNKLVFLPHSITHLTSLKTLDARLNNLRSLPEDLENLINLK 198

Query: 61  ELNA--NFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKS 118
            LN   NF  L  LP +IG  L +L  L I+ N+I  LP S+  L  L+ L    N L S
Sbjct: 199 VLNVSQNFQYLETLPYSIGL-LFSLIELDISYNRITSLPNSIGCLRKLQKLSVEGNPLVS 257

Query: 119 LPEDL 123
            P ++
Sbjct: 258 PPMEV 262


>gi|283132365|dbj|BAI63588.1| leucine rich repeat protein [Lotus japonicus]
          Length = 350

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 221/281 (78%), Positives = 257/281 (91%), Gaps = 2/281 (0%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPESLTARLLN+VVLDVHSNQL+ LPNS+GCLSKLKVL+VSGNL+E LPK+IENCR+LEE
Sbjct: 69  IPESLTARLLNMVVLDVHSNQLRSLPNSVGCLSKLKVLNVSGNLIEYLPKSIENCRALEE 128

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LNANFNKL QLPDT+GFEL+NLK LS+N NK+V LP+S +HLTSL++LDARLNCL+SLP+
Sbjct: 129 LNANFNKLSQLPDTMGFELLNLKKLSVNSNKLVFLPRSTSHLTSLKILDARLNCLRSLPD 188

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           DLENLINLE LN+SQNFQYL+TLPYSIGLL+SLVELDVSYN++ +LPDSIGCL+KLQKLS
Sbjct: 189 DLENLINLETLNVSQNFQYLDTLPYSIGLLLSLVELDVSYNRVKSLPDSIGCLKKLQKLS 248

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSP-KKKSWVGKLVKYGTFNGALRNHR 240
           +EGNPLVSPP +VVEQGL AVK YL  KMN+ H+SP KKKSWVGKLVKYGTFNG  R+  
Sbjct: 249 VEGNPLVSPPPEVVEQGLHAVKEYLCNKMNSAHQSPTKKKSWVGKLVKYGTFNGHARSGP 308

Query: 241 SEERERFIMS-DFRAIDGLASPRHIGMFSPRRLFSPRSYFT 280
            EERE FI+  ++R+IDGLASPR++GMFSPRRLFSPRSYF+
Sbjct: 309 REEREAFIVDHEYRSIDGLASPRYMGMFSPRRLFSPRSYFS 349



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 94/161 (58%), Gaps = 3/161 (1%)

Query: 35  KLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
           KL+++D+SG  LESLP    N   + +L+ + N L+ +P+++   L+N+  L ++ N++ 
Sbjct: 32  KLEIVDLSGMSLESLPNPSLNLAIICKLDLSNNNLQNIPESLTARLLNMVVLDVHSNQLR 91

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL-LMS 153
            LP S+  L+ L+VL+   N ++ LP+ +EN   LE LN   NF  L  LP ++G  L++
Sbjct: 92  SLPNSVGCLSKLKVLNVSGNLIEYLPKSIENCRALEELN--ANFNKLSQLPDTMGFELLN 149

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L +L V+ NK+  LP S   L  L+ L    N L S P D+
Sbjct: 150 LKKLSVNSNKLVFLPRSTSHLTSLKILDARLNCLRSLPDDL 190


>gi|356562028|ref|XP_003549277.1| PREDICTED: leucine-rich repeat and calponin homology
           domain-containing protein 1-like [Glycine max]
          Length = 360

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 217/287 (75%), Positives = 251/287 (87%), Gaps = 8/287 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPESLTARLLN+VVLDVHSNQL+ LPNSIGCL KLKVL+VSGNL+E LPKTIENCRSLEE
Sbjct: 73  IPESLTARLLNMVVLDVHSNQLRSLPNSIGCLYKLKVLNVSGNLIEYLPKTIENCRSLEE 132

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LNANFNKL QLPDTIG+EL NLK LS+N NK+V LP+S +HLT+LR+LDARLNCL+SLPE
Sbjct: 133 LNANFNKLIQLPDTIGYELKNLKKLSVNSNKLVFLPRSTSHLTALRILDARLNCLRSLPE 192

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           DLENLINLE LN+SQNFQYL++LPYS+G L+SLVELDVSYNKI  LPDSIGCL+KLQK+S
Sbjct: 193 DLENLINLETLNVSQNFQYLDSLPYSVGFLLSLVELDVSYNKIRALPDSIGCLKKLQKIS 252

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSP-----KKKSWVGKLVKYGTFNGAL 236
           +EGNPL SPP ++VEQGL AVK YL +KMN  H+SP     K KSWVG+LV+YGTFNG  
Sbjct: 253 VEGNPLSSPPPELVEQGLHAVKEYLCQKMNAGHQSPTTNNKKSKSWVGRLVRYGTFNGIG 312

Query: 237 RNHRS---EERERFIMSDFRAIDGLASPRHIGMFSPRRLFSPRSYFT 280
           ++  +   EERE FI+ D+R IDGLASPR++GMFSPRRLFSPR+YFT
Sbjct: 313 QSRAAGAREEREAFIVPDYRPIDGLASPRYMGMFSPRRLFSPRTYFT 359


>gi|224090495|ref|XP_002309000.1| predicted protein [Populus trichocarpa]
 gi|222854976|gb|EEE92523.1| predicted protein [Populus trichocarpa]
          Length = 336

 Score =  436 bits (1120), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 217/281 (77%), Positives = 249/281 (88%), Gaps = 3/281 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           MIPESLTAR+LN+VVLDVHSNQLK LPNSIGCLSKLKVL+VSGNL+ESLP+TIENCR LE
Sbjct: 57  MIPESLTARMLNLVVLDVHSNQLKSLPNSIGCLSKLKVLNVSGNLIESLPRTIENCRCLE 116

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           ELNANFNKL +LPDTIGFEL+NLK LS+N NK+V LP S +HLTSL++LDARLN L+SLP
Sbjct: 117 ELNANFNKLSRLPDTIGFELVNLKKLSVNSNKLVFLPMSTSHLTSLKILDARLNNLRSLP 176

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           EDLENLINLEVLN+SQNFQYLE LPY+IG+L+SLVELDVSYNKITTLPDS+GCLRKLQKL
Sbjct: 177 EDLENLINLEVLNVSQNFQYLEALPYAIGVLISLVELDVSYNKITTLPDSMGCLRKLQKL 236

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGALRNHR 240
            +EGNPL+SPPM+VVE+GL  VK YLSEKMN  HKSP KKSWVGKLVKYGTFNG     R
Sbjct: 237 YVEGNPLISPPMEVVERGLHVVKEYLSEKMNAGHKSPTKKSWVGKLVKYGTFNGRRIGSR 296

Query: 241 SEERERFIMS--DFRAIDGLASPRHIGMFSPRRLFSPRSYF 279
            ++R+ F +S   + + DGLASPRH+ MFSPRRLFS +++F
Sbjct: 297 -KDRQWFHVSPDHYHSFDGLASPRHLRMFSPRRLFSSKNFF 336



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 94/161 (58%), Gaps = 3/161 (1%)

Query: 35  KLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
           +L+V+D+SG  LE+LP    N  ++ +L  + N L+ +P+++   ++NL  L ++ N++ 
Sbjct: 21  RLEVVDLSGMSLETLPHPSLNLATICKLYLSNNDLQMIPESLTARMLNLVVLDVHSNQLK 80

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL-LMS 153
            LP S+  L+ L+VL+   N ++SLP  +EN   LE LN   NF  L  LP +IG  L++
Sbjct: 81  SLPNSIGCLSKLKVLNVSGNLIESLPRTIENCRCLEELN--ANFNKLSRLPDTIGFELVN 138

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L +L V+ NK+  LP S   L  L+ L    N L S P D+
Sbjct: 139 LKKLSVNSNKLVFLPMSTSHLTSLKILDARLNNLRSLPEDL 179


>gi|357479483|ref|XP_003610027.1| Leucine rich repeat protein [Medicago truncatula]
 gi|355511082|gb|AES92224.1| Leucine rich repeat protein [Medicago truncatula]
          Length = 343

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 212/281 (75%), Positives = 250/281 (88%), Gaps = 4/281 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPESLTARLLN+VVLDVHSNQL+ LPNSIGCLS+LK+L+VSGNL+ +LPKTIENCR+LE+
Sbjct: 64  IPESLTARLLNMVVLDVHSNQLRSLPNSIGCLSRLKLLNVSGNLIHTLPKTIENCRALED 123

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN NFNKL QLPDTIG+ELINLK LS+N NK++ LP+S +HLTSL+VLDARLNCL+SLPE
Sbjct: 124 LNLNFNKLSQLPDTIGYELINLKKLSVNSNKLIFLPRSTSHLTSLKVLDARLNCLRSLPE 183

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           DLENLINLE+LN+SQNFQYL ++PYS+GLL+SL ELDVSYNKI +LPDSIGCL KLQKLS
Sbjct: 184 DLENLINLEILNVSQNFQYLTSIPYSVGLLLSLTELDVSYNKIRSLPDSIGCLNKLQKLS 243

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSP-KKKSWVGKLVKYGTFNGALRNHR 240
           +EGNPL SPP +VVE+GL  VK YL  KMN  H+SP KKKSWVG+LVKYGTFN  +R+  
Sbjct: 244 VEGNPLTSPPPEVVERGLHIVKEYLCNKMNAGHQSPTKKKSWVGRLVKYGTFN--VRSGA 301

Query: 241 SEERERFIMSDF-RAIDGLASPRHIGMFSPRRLFSPRSYFT 280
            EE E FI+ ++ R+IDGLASPRH+GMFSPRRLFSPR+YF+
Sbjct: 302 REEHEAFILPEYNRSIDGLASPRHMGMFSPRRLFSPRNYFS 342



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 99/168 (58%), Gaps = 3/168 (1%)

Query: 28  NSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLS 87
           NSI    +L+++D+SG  LESLP    N  ++ +L+ + N L+ +P+++   L+N+  L 
Sbjct: 20  NSIEEEERLEIVDLSGMSLESLPNPSLNLATICKLDLSNNNLQNIPESLTARLLNMVVLD 79

Query: 88  INCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYS 147
           ++ N++  LP S+  L+ L++L+   N + +LP+ +EN   LE LN+  NF  L  LP +
Sbjct: 80  VHSNQLRSLPNSIGCLSRLKLLNVSGNLIHTLPKTIENCRALEDLNL--NFNKLSQLPDT 137

Query: 148 IGL-LMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           IG  L++L +L V+ NK+  LP S   L  L+ L    N L S P D+
Sbjct: 138 IGYELINLKKLSVNSNKLIFLPRSTSHLTSLKVLDARLNCLRSLPEDL 185


>gi|449457277|ref|XP_004146375.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Cucumis
           sativus]
 gi|449530051|ref|XP_004172010.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Cucumis
           sativus]
          Length = 379

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 208/282 (73%), Positives = 245/282 (86%), Gaps = 1/282 (0%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IPESLTARLLN+V  DVHSNQLK LPNSIGCLSKLK+L+VSGNL+ SLP TIENCRSLE
Sbjct: 98  VIPESLTARLLNLVSFDVHSNQLKTLPNSIGCLSKLKILNVSGNLIVSLPSTIENCRSLE 157

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           ELNANFN+L +LPDTIGFEL NLK LS+N NK+  LP SL+HLT+LRVLD+ LNCL+SLP
Sbjct: 158 ELNANFNQLTRLPDTIGFELTNLKKLSVNSNKLAFLPHSLSHLTALRVLDSHLNCLRSLP 217

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +DLENLINL+VLNISQNFQ+L+ LPYSIGLL+SLVELDVSYNKI +LPDSIGCL+ L+KL
Sbjct: 218 DDLENLINLQVLNISQNFQFLQALPYSIGLLISLVELDVSYNKIISLPDSIGCLKNLKKL 277

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHK-SPKKKSWVGKLVKYGTFNGALRNH 239
           ++EGNPL SPP +V+EQGL  V+ YL++KMN  HK S KK+SWVGKLVKYGTFN      
Sbjct: 278 NVEGNPLTSPPPEVIEQGLDTVRMYLTDKMNGVHKDSHKKRSWVGKLVKYGTFNSRSNKL 337

Query: 240 RSEERERFIMSDFRAIDGLASPRHIGMFSPRRLFSPRSYFTK 281
             EE+E FIM ++R+IDGLASPR++GMFSPRRLFSPR  ++K
Sbjct: 338 SREEKEGFIMPEYRSIDGLASPRYMGMFSPRRLFSPRHSYSK 379



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 89/157 (56%), Gaps = 3/157 (1%)

Query: 39  LDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ 98
           LD+SG  L SLP    N  S+  L+ + N L+ +P+++   L+NL +  ++ N++  LP 
Sbjct: 66  LDLSGLSLHSLPNPTLNLASISHLDLSNNNLQVIPESLTARLLNLVSFDVHSNQLKTLPN 125

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL-LMSLVEL 157
           S+  L+ L++L+   N + SLP  +EN  +LE LN   NF  L  LP +IG  L +L +L
Sbjct: 126 SIGCLSKLKILNVSGNLIVSLPSTIENCRSLEELN--ANFNQLTRLPDTIGFELTNLKKL 183

Query: 158 DVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            V+ NK+  LP S+  L  L+ L    N L S P D+
Sbjct: 184 SVNSNKLAFLPHSLSHLTALRVLDSHLNCLRSLPDDL 220


>gi|297836332|ref|XP_002886048.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297331888|gb|EFH62307.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 377

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 208/283 (73%), Positives = 245/283 (86%), Gaps = 3/283 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPESLTARLLN++ LDVHSNQ+K LPNSIGCLSKLK L+VSGN L S PK+I++CRSLEE
Sbjct: 95  IPESLTARLLNLIALDVHSNQIKALPNSIGCLSKLKTLNVSGNFLVSFPKSIQHCRSLEE 154

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LNANFNKL +LPD+IGFEL NL+ LSIN NK++ LP S+THLTSLRVLDARLNCL  LP+
Sbjct: 155 LNANFNKLIRLPDSIGFELTNLRKLSINSNKLISLPLSITHLTSLRVLDARLNCLMILPD 214

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           DLENLINLE+LN+SQNFQYL  LP SIGLLM+L+ELDVSYNKIT LP+SIGC+R+L+KLS
Sbjct: 215 DLENLINLEILNVSQNFQYLSALPSSIGLLMNLIELDVSYNKITVLPESIGCMRRLRKLS 274

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDH-KSP-KKKSW-VGKLVKYGTFNGALRN 238
           +EGNPLVSPP++V+EQ L  V+ YL++KMN    +SP KKKSW  GKLVKYGTFNG  R+
Sbjct: 275 VEGNPLVSPPIEVMEQNLQVVREYLTQKMNGGSPRSPSKKKSWGFGKLVKYGTFNGGSRS 334

Query: 239 HRSEERERFIMSDFRAIDGLASPRHIGMFSPRRLFSPRSYFTK 281
              EERE FIM ++RAID LASPR+ GMFSPRRLFSPR+YF++
Sbjct: 335 WNREEREGFIMPEYRAIDSLASPRYSGMFSPRRLFSPRTYFSR 377



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 94/161 (58%), Gaps = 3/161 (1%)

Query: 35  KLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
           +L+V+++SG  LESLP    N   + +L+ + N L+ +P+++   L+NL  L ++ N+I 
Sbjct: 58  RLEVVNLSGMALESLPNPSLNLAQICKLDLSNNHLQTIPESLTARLLNLIALDVHSNQIK 117

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL-LMS 153
            LP S+  L+ L+ L+   N L S P+ +++  +LE LN   NF  L  LP SIG  L +
Sbjct: 118 ALPNSIGCLSKLKTLNVSGNFLVSFPKSIQHCRSLEELN--ANFNKLIRLPDSIGFELTN 175

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L +L ++ NK+ +LP SI  L  L+ L    N L+  P D+
Sbjct: 176 LRKLSINSNKLISLPLSITHLTSLRVLDARLNCLMILPDDL 216


>gi|15224761|ref|NP_179523.1| ras group-related protein LRR 6 [Arabidopsis thaliana]
 gi|3135263|gb|AAC16463.1| putative leucine-rich-repeat protein [Arabidopsis thaliana]
 gi|57868154|gb|AAW57415.1| plant intracellular Ras-group-related LRR protein 6 [Arabidopsis
           thaliana]
 gi|330251775|gb|AEC06869.1| ras group-related protein LRR 6 [Arabidopsis thaliana]
          Length = 380

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 207/283 (73%), Positives = 245/283 (86%), Gaps = 3/283 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPESLTARLLN++ LDVHSNQ+K LPNSIGCLSKLK L+VSGN L S PK+I++CRSLEE
Sbjct: 98  IPESLTARLLNLIALDVHSNQIKALPNSIGCLSKLKTLNVSGNFLVSFPKSIQHCRSLEE 157

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LNANFNKL +LPD+IGFEL NL+ LSIN NK++ LP S+THLTSLRVLDARLNCL  LP+
Sbjct: 158 LNANFNKLIRLPDSIGFELTNLRKLSINSNKLISLPISITHLTSLRVLDARLNCLMILPD 217

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           DLENLINLE+LN+SQNFQYL  LP SIGLLM+L+ELDVSYNKIT LP+SIGC+R+L+KLS
Sbjct: 218 DLENLINLEILNVSQNFQYLSALPSSIGLLMNLIELDVSYNKITVLPESIGCMRRLRKLS 277

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDH-KSP-KKKSW-VGKLVKYGTFNGALRN 238
           +EGNPLVSPP++V+EQ L  V+ YL++KMN    +SP KKKSW  GKLVKYGTFNG  R+
Sbjct: 278 VEGNPLVSPPIEVMEQNLQVVREYLTQKMNGGSPRSPSKKKSWGFGKLVKYGTFNGGSRS 337

Query: 239 HRSEERERFIMSDFRAIDGLASPRHIGMFSPRRLFSPRSYFTK 281
              EERE FIM ++R+ID LASPR+ GMFSPRRLFSPR+YF++
Sbjct: 338 WNREEREGFIMPEYRSIDSLASPRYSGMFSPRRLFSPRTYFSR 380



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 94/161 (58%), Gaps = 3/161 (1%)

Query: 35  KLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
           +L+V+++SG  LESLP    N   + +L+ + N L+ +P+++   L+NL  L ++ N+I 
Sbjct: 61  RLEVVNLSGMALESLPNPSLNLAQICKLDLSNNHLQTIPESLTARLLNLIALDVHSNQIK 120

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL-LMS 153
            LP S+  L+ L+ L+   N L S P+ +++  +LE LN   NF  L  LP SIG  L +
Sbjct: 121 ALPNSIGCLSKLKTLNVSGNFLVSFPKSIQHCRSLEELN--ANFNKLIRLPDSIGFELTN 178

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L +L ++ NK+ +LP SI  L  L+ L    N L+  P D+
Sbjct: 179 LRKLSINSNKLISLPISITHLTSLRVLDARLNCLMILPDDL 219


>gi|449508231|ref|XP_004163257.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Cucumis
           sativus]
          Length = 367

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 204/285 (71%), Positives = 238/285 (83%), Gaps = 5/285 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPESL ARLLNVVVLDVHSNQLKCLP+SIGCL KLK L+VSGNL+ SLPKT+ +CRSLEE
Sbjct: 83  IPESLIARLLNVVVLDVHSNQLKCLPHSIGCLGKLKTLNVSGNLIASLPKTLVDCRSLEE 142

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN NFNKL +LPD +GFEL NLK LS+N NK++ LP S++HLT+LRVLDARLNCL SLP+
Sbjct: 143 LNVNFNKLMKLPDALGFELTNLKKLSVNSNKLIYLPHSISHLTNLRVLDARLNCLTSLPD 202

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           DLENLI LEVLN+SQNF +L+TLPYSIGLL+SLVELD+SYN ITTLP+SIGCL++L KL 
Sbjct: 203 DLENLIKLEVLNVSQNFHHLQTLPYSIGLLLSLVELDISYNGITTLPESIGCLKRLHKLC 262

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHK-SPKKKSWVGKLVKYGTFNGALRNHR 240
           ++GNPL SPP  V EQGL AVK YLSEKMN  H+ S KKKSWVGKLV+YGTFNG     R
Sbjct: 263 VDGNPLSSPPSLVFEQGLHAVKEYLSEKMNAGHQNSHKKKSWVGKLVRYGTFNGGYGYFR 322

Query: 241 S----EERERFIMSDFRAIDGLASPRHIGMFSPRRLFSPRSYFTK 281
           +    E+RE F+ S +R+IDGL SPR+ GMFS RR F+ R YFT+
Sbjct: 323 TTEPREDREAFMWSQYRSIDGLTSPRYTGMFSARRFFTTRGYFTR 367



 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 71/127 (55%), Gaps = 3/127 (2%)

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  +P+++   L+N+  L ++ N++  LP S+  L  L+ L+   N + SLP+ L +  +
Sbjct: 80  LESIPESLIARLLNVVVLDVHSNQLKCLPHSIGCLGKLKTLNVSGNLIASLPKTLVDCRS 139

Query: 129 LEVLNISQNFQYLETLPYSIGL-LMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           LE LN+  NF  L  LP ++G  L +L +L V+ NK+  LP SI  L  L+ L    N L
Sbjct: 140 LEELNV--NFNKLMKLPDALGFELTNLKKLSVNSNKLIYLPHSISHLTNLRVLDARLNCL 197

Query: 188 VSPPMDV 194
            S P D+
Sbjct: 198 TSLPDDL 204


>gi|449465350|ref|XP_004150391.1| PREDICTED: leucine-rich repeat-containing protein 1-like [Cucumis
           sativus]
          Length = 362

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 204/285 (71%), Positives = 238/285 (83%), Gaps = 5/285 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPESL ARLLNVVVLDVHSNQLKCLP+SIGCL KLK L+VSGNL+ SLPKT+ +CRSLEE
Sbjct: 78  IPESLIARLLNVVVLDVHSNQLKCLPHSIGCLGKLKTLNVSGNLIASLPKTLVDCRSLEE 137

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN NFNKL +LPD +GFEL NLK LS+N NK++ LP S++HLT+LRVLDARLNCL SLP+
Sbjct: 138 LNVNFNKLMKLPDALGFELTNLKKLSVNSNKLIYLPHSISHLTNLRVLDARLNCLTSLPD 197

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           DLENLI LEVLN+SQNF +L+TLPYSIGLL+SLVELD+SYN ITTLP+SIGCL++L KL 
Sbjct: 198 DLENLIKLEVLNVSQNFHHLQTLPYSIGLLLSLVELDISYNGITTLPESIGCLKRLHKLC 257

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHK-SPKKKSWVGKLVKYGTFNGALRNHR 240
           ++GNPL SPP  V EQGL AVK YLSEKMN  H+ S KKKSWVGKLV+YGTFNG     R
Sbjct: 258 VDGNPLSSPPSLVFEQGLHAVKEYLSEKMNAGHQNSHKKKSWVGKLVRYGTFNGGYGYFR 317

Query: 241 S----EERERFIMSDFRAIDGLASPRHIGMFSPRRLFSPRSYFTK 281
           +    E+RE F+ S +R+IDGL SPR+ GMFS RR F+ R YFT+
Sbjct: 318 TTEPREDREAFMWSQYRSIDGLTSPRYTGMFSARRFFTTRGYFTR 362



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/161 (34%), Positives = 93/161 (57%), Gaps = 3/161 (1%)

Query: 35  KLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
           +L+++D+SG  L SLP    N  ++ +L+ + N L+ +P+++   L+N+  L ++ N++ 
Sbjct: 41  RLEIVDLSGISLNSLPNPNLNLTTICKLDLSNNNLQSIPESLIARLLNVVVLDVHSNQLK 100

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL-LMS 153
            LP S+  L  L+ L+   N + SLP+ L +  +LE LN+  NF  L  LP ++G  L +
Sbjct: 101 CLPHSIGCLGKLKTLNVSGNLIASLPKTLVDCRSLEELNV--NFNKLMKLPDALGFELTN 158

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L +L V+ NK+  LP SI  L  L+ L    N L S P D+
Sbjct: 159 LKKLSVNSNKLIYLPHSISHLTNLRVLDARLNCLTSLPDDL 199


>gi|224144293|ref|XP_002325250.1| predicted protein [Populus trichocarpa]
 gi|222866684|gb|EEF03815.1| predicted protein [Populus trichocarpa]
          Length = 345

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 215/300 (71%), Positives = 247/300 (82%), Gaps = 26/300 (8%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           MIPESLTAR+LN+VVLDVHSNQLK LPNSIGCLSKLK L+VS NLL SLP+TIENCRSLE
Sbjct: 45  MIPESLTARMLNLVVLDVHSNQLKSLPNSIGCLSKLKALNVSCNLLVSLPRTIENCRSLE 104

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           ELN NFNKL +LPDTIGFEL+NLK LS+N NK+V LP S +++TSL+ LDARLN L+SLP
Sbjct: 105 ELNVNFNKLSRLPDTIGFELVNLKKLSVNSNKLVFLPMSTSYITSLKTLDARLNNLRSLP 164

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           EDLENLINLEVLN+SQNFQYLETLPYSIGLL+SLVELDVSYNKITTLPDS+GCLRKLQKL
Sbjct: 165 EDLENLINLEVLNVSQNFQYLETLPYSIGLLLSLVELDVSYNKITTLPDSMGCLRKLQKL 224

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSP-KKKSWVGKLVKYGTFNGALRNH 239
           S+EGNPLVSPPM+VVE+G+  VK YLSEKMN  HKSP KKKSWVGKLVKYGTF+G + + 
Sbjct: 225 SVEGNPLVSPPMEVVERGVHFVKEYLSEKMNAGHKSPTKKKSWVGKLVKYGTFSGRIGSR 284

Query: 240 RSEERERFIM-----SDF------------------RAIDGLASPRHIGMFSPRRLFSPR 276
           +  +RE F +     S F                  R+I+GLASPR++ +FSP RLFS +
Sbjct: 285 K--DREGFDVTPDHYSSFDGLASPAYSGKSPKHTWNRSIEGLASPRYLRIFSPGRLFSSK 342



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 91/157 (57%), Gaps = 3/157 (1%)

Query: 39  LDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ 98
           +D+SG  LE++P    N  ++ +LN + N L+ +P+++   ++NL  L ++ N++  LP 
Sbjct: 13  VDLSGMSLETIPNPSLNLAAICKLNLSNNDLQMIPESLTARMLNLVVLDVHSNQLKSLPN 72

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL-LMSLVEL 157
           S+  L+ L+ L+   N L SLP  +EN  +LE LN+  NF  L  LP +IG  L++L +L
Sbjct: 73  SIGCLSKLKALNVSCNLLVSLPRTIENCRSLEELNV--NFNKLSRLPDTIGFELVNLKKL 130

Query: 158 DVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            V+ NK+  LP S   +  L+ L    N L S P D+
Sbjct: 131 SVNSNKLVFLPMSTSYITSLKTLDARLNNLRSLPEDL 167


>gi|356530354|ref|XP_003533747.1| PREDICTED: leucine-rich repeat protein lrrA-like [Glycine max]
          Length = 355

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 199/276 (72%), Positives = 230/276 (83%), Gaps = 1/276 (0%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPESLTARLLNV VLDV SNQLK LPNSIGCLSKLKVL+VSGN +ESLPKTIENCR+LEE
Sbjct: 72  IPESLTARLLNVEVLDVRSNQLKSLPNSIGCLSKLKVLNVSGNFIESLPKTIENCRALEE 131

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LNANFNKL +LPDTIGFEL+NLK LS+N NK+V LP S +HLT+L+VLDARLNCL++LPE
Sbjct: 132 LNANFNKLSKLPDTIGFELVNLKKLSVNSNKLVFLPSSTSHLTALKVLDARLNCLRALPE 191

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           DLENLINLE LN+SQNFQYL+TLPYSIGLL+SL+ELDVSYN I TLP+SIGCL+ LQKLS
Sbjct: 192 DLENLINLETLNVSQNFQYLDTLPYSIGLLLSLIELDVSYNNIKTLPESIGCLKNLQKLS 251

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMN-NDHKSPKKKSWVGKLVKYGTFNGALRNHR 240
           +EGNPL  PPM+VVEQGL  V  Y+  KMN +D    KK+ W+GK+VK GTFN  +R  +
Sbjct: 252 VEGNPLTCPPMEVVEQGLHVVMEYMHHKMNSSDQNKTKKRWWIGKIVKCGTFNKQMRGGK 311

Query: 241 SEERERFIMSDFRAIDGLASPRHIGMFSPRRLFSPR 276
             E E + M   + I+GLASP  +GM SP RLFSPR
Sbjct: 312 RPENEGYNMLKHQNINGLASPGLMGMLSPLRLFSPR 347



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 96/161 (59%), Gaps = 3/161 (1%)

Query: 35  KLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
           +L V+D+SG  LE LPK   +  ++ +L+ + N L+++P+++   L+N++ L +  N++ 
Sbjct: 35  RLHVMDLSGMSLEFLPKPSLDLATICKLDLSNNNLQEIPESLTARLLNVEVLDVRSNQLK 94

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL-LMS 153
            LP S+  L+ L+VL+   N ++SLP+ +EN   LE LN   NF  L  LP +IG  L++
Sbjct: 95  SLPNSIGCLSKLKVLNVSGNFIESLPKTIENCRALEELN--ANFNKLSKLPDTIGFELVN 152

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L +L V+ NK+  LP S   L  L+ L    N L + P D+
Sbjct: 153 LKKLSVNSNKLVFLPSSTSHLTALKVLDARLNCLRALPEDL 193



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 3/126 (2%)

Query: 67  NKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDL-EN 125
           N +R+   +   E   L  + ++   +  LP+    L ++  LD   N L+ +PE L   
Sbjct: 20  NTMRKRERSKAMEKERLHVMDLSGMSLEFLPKPSLDLATICKLDLSNNNLQEIPESLTAR 79

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L+N+EVL++  N   L++LP SIG L  L  L+VS N I +LP +I   R L++L+   N
Sbjct: 80  LLNVEVLDVRSN--QLKSLPNSIGCLSKLKVLNVSGNFIESLPKTIENCRALEELNANFN 137

Query: 186 PLVSPP 191
            L   P
Sbjct: 138 KLSKLP 143


>gi|356556262|ref|XP_003546445.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Glycine max]
          Length = 363

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 200/284 (70%), Positives = 230/284 (80%), Gaps = 5/284 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPESLTARLLNV VLDV SNQL  LPNSIGCLSKLKVL+VSGN +ESLPKTIENCR+LEE
Sbjct: 80  IPESLTARLLNVEVLDVRSNQLNSLPNSIGCLSKLKVLNVSGNFIESLPKTIENCRALEE 139

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LNANFNKL +LPDTIGFELINLK LS+N NK+V LP S +HLT+L+VLDARLNCL++LPE
Sbjct: 140 LNANFNKLSKLPDTIGFELINLKKLSVNSNKLVFLPSSTSHLTALKVLDARLNCLRALPE 199

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           DLENLINLE LN+SQNFQYLET+PYSIGLL SLVELDVSYN I TLP+SIGCL+ LQKLS
Sbjct: 200 DLENLINLETLNVSQNFQYLETIPYSIGLLWSLVELDVSYNNIKTLPESIGCLKNLQKLS 259

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMN-NDHKSPKKKSWVGKLVKYGTFNGALRNHR 240
           +EGNPL  PPM+VVEQGL  V  Y+  K+N +D    KK+ W+GK+VK GTFN   RN +
Sbjct: 260 VEGNPLTCPPMEVVEQGLHVVMEYMHHKINSSDQNKTKKRWWMGKIVKCGTFNKQFRNGK 319

Query: 241 SEERERFIMSDFRAIDGLASPRHIGMFSPRRLF----SPRSYFT 280
             E   + M   + I+GLASP  +GM SP RLF    SPR +F+
Sbjct: 320 RPEHVGYNMLKHQNINGLASPGFMGMLSPLRLFSPHRSPRHFFS 363



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 97/161 (60%), Gaps = 3/161 (1%)

Query: 35  KLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
           +L+V+D+SG  LE LPK   +  ++ +L+ + N L+++P+++   L+N++ L +  N++ 
Sbjct: 43  RLQVMDLSGMSLEFLPKPSLDLATICKLDLSNNNLQEIPESLTARLLNVEVLDVRSNQLN 102

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL-LMS 153
            LP S+  L+ L+VL+   N ++SLP+ +EN   LE LN   NF  L  LP +IG  L++
Sbjct: 103 SLPNSIGCLSKLKVLNVSGNFIESLPKTIENCRALEELN--ANFNKLSKLPDTIGFELIN 160

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L +L V+ NK+  LP S   L  L+ L    N L + P D+
Sbjct: 161 LKKLSVNSNKLVFLPSSTSHLTALKVLDARLNCLRALPEDL 201



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 3/126 (2%)

Query: 67  NKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDL-EN 125
           N +R+   +   E   L+ + ++   +  LP+    L ++  LD   N L+ +PE L   
Sbjct: 28  NTMRKRERSKAMEKERLQVMDLSGMSLEFLPKPSLDLATICKLDLSNNNLQEIPESLTAR 87

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L+N+EVL++  N   L +LP SIG L  L  L+VS N I +LP +I   R L++L+   N
Sbjct: 88  LLNVEVLDVRSN--QLNSLPNSIGCLSKLKVLNVSGNFIESLPKTIENCRALEELNANFN 145

Query: 186 PLVSPP 191
            L   P
Sbjct: 146 KLSKLP 151


>gi|22328943|ref|NP_194335.2| plant intracellular ras group-related LRR 8 [Arabidopsis thaliana]
 gi|20260486|gb|AAM13141.1| putative leucine-rich-repeat protein [Arabidopsis thaliana]
 gi|30725612|gb|AAP37828.1| At4g26050 [Arabidopsis thaliana]
 gi|332659749|gb|AEE85149.1| plant intracellular ras group-related LRR 8 [Arabidopsis thaliana]
          Length = 383

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 198/285 (69%), Positives = 239/285 (83%), Gaps = 6/285 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPESL AR+LN+  LD+ SNQLK LPNSIGCLSKLK L+VSGN L+SLPKTIE+CRSLEE
Sbjct: 95  IPESLVARMLNLWALDLQSNQLKTLPNSIGCLSKLKFLNVSGNYLQSLPKTIEDCRSLEE 154

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LNANFN+L +LPD IGFEL NL  LS+N NK+V+LP S+++LTSLRVLDARLN L SLPE
Sbjct: 155 LNANFNELTRLPDAIGFELTNLTKLSVNSNKLVLLPNSVSYLTSLRVLDARLNRLSSLPE 214

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           DLENL+NL+VLN+SQNFQ+L TLPYS+GLL+SLVELDVSYN IT LPDS+GCLR++QKLS
Sbjct: 215 DLENLVNLQVLNVSQNFQHLTTLPYSVGLLISLVELDVSYNGITVLPDSLGCLRRIQKLS 274

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKS--PKKKSW-VGKLVKYGTFNGALRN 238
           +EGNPL+SPP +VVEQGL A+K Y+SEKM   +K    KKKSW +GKLVKYG  +   R+
Sbjct: 275 VEGNPLISPPFEVVEQGLEALKQYMSEKMTESYKKTPTKKKSWGIGKLVKYGLSSSPGRS 334

Query: 239 -HRSEERERFI-MSDFRAIDGLASPRHIGMFSPRRLFSPRS-YFT 280
             R + +E FI +SD+R IDG+ASPRH+ +F+PRRL SP S YF+
Sbjct: 335 TGREDGKEGFINVSDYRQIDGIASPRHVSLFNPRRLLSPLSAYFS 379



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 94/160 (58%), Gaps = 3/160 (1%)

Query: 36  LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           +K LD+SG  L SL  +  N  S+ +L+ + N ++++P+++   ++NL  L +  N++  
Sbjct: 59  IKTLDLSGMSLASLSASSINLASISKLDLSNNNIQKIPESLVARMLNLWALDLQSNQLKT 118

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL-LMSL 154
           LP S+  L+ L+ L+   N L+SLP+ +E+  +LE LN   NF  L  LP +IG  L +L
Sbjct: 119 LPNSIGCLSKLKFLNVSGNYLQSLPKTIEDCRSLEELN--ANFNELTRLPDAIGFELTNL 176

Query: 155 VELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            +L V+ NK+  LP+S+  L  L+ L    N L S P D+
Sbjct: 177 TKLSVNSNKLVLLPNSVSYLTSLRVLDARLNRLSSLPEDL 216



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 70/138 (50%), Gaps = 27/138 (19%)

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE------------DLEN---- 125
           N+KTL ++   +  L  S  +L S+  LD   N ++ +PE            DL++    
Sbjct: 58  NIKTLDLSGMSLASLSASSINLASISKLDLSNNNIQKIPESLVARMLNLWALDLQSNQLK 117

Query: 126 --------LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGC-LRK 176
                   L  L+ LN+S N  YL++LP +I    SL EL+ ++N++T LPD+IG  L  
Sbjct: 118 TLPNSIGCLSKLKFLNVSGN--YLQSLPKTIEDCRSLEELNANFNELTRLPDAIGFELTN 175

Query: 177 LQKLSLEGNPLVSPPMDV 194
           L KLS+  N LV  P  V
Sbjct: 176 LTKLSVNSNKLVLLPNSV 193


>gi|4538934|emb|CAB39670.1| putative leucine-rich-repeat protein [Arabidopsis thaliana]
 gi|7269456|emb|CAB79460.1| putative leucine-rich-repeat protein [Arabidopsis thaliana]
 gi|57868158|gb|AAW57417.1| plant intracellular Ras-group-related LRR protein 8 [Arabidopsis
           thaliana]
          Length = 382

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 198/285 (69%), Positives = 239/285 (83%), Gaps = 6/285 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPESL AR+LN+  LD+ SNQLK LPNSIGCLSKLK L+VSGN L+SLPKTIE+CRSLEE
Sbjct: 94  IPESLVARMLNLWALDLQSNQLKTLPNSIGCLSKLKFLNVSGNYLQSLPKTIEDCRSLEE 153

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LNANFN+L +LPD IGFEL NL  LS+N NK+V+LP S+++LTSLRVLDARLN L SLPE
Sbjct: 154 LNANFNELTRLPDAIGFELTNLTKLSVNSNKLVLLPNSVSYLTSLRVLDARLNRLSSLPE 213

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           DLENL+NL+VLN+SQNFQ+L TLPYS+GLL+SLVELDVSYN IT LPDS+GCLR++QKLS
Sbjct: 214 DLENLVNLQVLNVSQNFQHLTTLPYSVGLLISLVELDVSYNGITVLPDSLGCLRRIQKLS 273

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKS--PKKKSW-VGKLVKYGTFNGALRN 238
           +EGNPL+SPP +VVEQGL A+K Y+SEKM   +K    KKKSW +GKLVKYG  +   R+
Sbjct: 274 VEGNPLISPPFEVVEQGLEALKQYMSEKMTESYKKTPTKKKSWGIGKLVKYGLSSSPGRS 333

Query: 239 -HRSEERERFI-MSDFRAIDGLASPRHIGMFSPRRLFSPRS-YFT 280
             R + +E FI +SD+R IDG+ASPRH+ +F+PRRL SP S YF+
Sbjct: 334 TGREDGKEGFINVSDYRQIDGIASPRHVSLFNPRRLLSPLSAYFS 378



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 94/160 (58%), Gaps = 3/160 (1%)

Query: 36  LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           +K LD+SG  L SL  +  N  S+ +L+ + N ++++P+++   ++NL  L +  N++  
Sbjct: 58  IKTLDLSGMSLASLSASSINLASISKLDLSNNNIQKIPESLVARMLNLWALDLQSNQLKT 117

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL-LMSL 154
           LP S+  L+ L+ L+   N L+SLP+ +E+  +LE LN   NF  L  LP +IG  L +L
Sbjct: 118 LPNSIGCLSKLKFLNVSGNYLQSLPKTIEDCRSLEELN--ANFNELTRLPDAIGFELTNL 175

Query: 155 VELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            +L V+ NK+  LP+S+  L  L+ L    N L S P D+
Sbjct: 176 TKLSVNSNKLVLLPNSVSYLTSLRVLDARLNRLSSLPEDL 215



 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 70/138 (50%), Gaps = 27/138 (19%)

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE------------DLEN---- 125
           N+KTL ++   +  L  S  +L S+  LD   N ++ +PE            DL++    
Sbjct: 57  NIKTLDLSGMSLASLSASSINLASISKLDLSNNNIQKIPESLVARMLNLWALDLQSNQLK 116

Query: 126 --------LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGC-LRK 176
                   L  L+ LN+S N  YL++LP +I    SL EL+ ++N++T LPD+IG  L  
Sbjct: 117 TLPNSIGCLSKLKFLNVSGN--YLQSLPKTIEDCRSLEELNANFNELTRLPDAIGFELTN 174

Query: 177 LQKLSLEGNPLVSPPMDV 194
           L KLS+  N LV  P  V
Sbjct: 175 LTKLSVNSNKLVLLPNSV 192


>gi|297803494|ref|XP_002869631.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315467|gb|EFH45890.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 386

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 197/285 (69%), Positives = 237/285 (83%), Gaps = 6/285 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPESL AR+LN+  LD+ SNQLK LPNSIGCLSKLK L+VSGN L+ LPKTIE+CRSLEE
Sbjct: 98  IPESLVARMLNLWALDLQSNQLKTLPNSIGCLSKLKFLNVSGNYLQFLPKTIEDCRSLEE 157

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LNANFN+L +LPD IGFEL NL  LS+N NK+V+LP S+++LTSLRVLDARLN L SLPE
Sbjct: 158 LNANFNELTRLPDAIGFELKNLTKLSVNSNKLVLLPNSVSYLTSLRVLDARLNRLSSLPE 217

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           DLENL+NL+VLN+SQNFQ+L TLPYS+GLL+SLVELDVSYN IT LPDS+GCLR++QKLS
Sbjct: 218 DLENLVNLQVLNVSQNFQHLTTLPYSVGLLISLVELDVSYNGITVLPDSLGCLRRIQKLS 277

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKS--PKKKSW-VGKLVKYG-TFNGALR 237
           +EGNPL+SPP +VVEQGL A+K Y+SEKM   +K    KKKSW +GKLVKYG + +    
Sbjct: 278 VEGNPLISPPFEVVEQGLEALKQYMSEKMTESYKKTPAKKKSWGIGKLVKYGLSSSPGRG 337

Query: 238 NHRSEERERFI-MSDFRAIDGLASPRHIGMFSPRRLFSPRS-YFT 280
             R + RE FI +SD+R IDG+ASPRH+ +F+PRRL SP S YF+
Sbjct: 338 TGRGDGREGFINVSDYRQIDGIASPRHVSLFNPRRLLSPLSAYFS 382



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 71/138 (51%), Gaps = 27/138 (19%)

Query: 82  NLKTLSINC-----------------------NKIVILPQSL-THLTSLRVLDARLNCLK 117
           NLKTL ++                        N I  +P+SL   + +L  LD + N LK
Sbjct: 61  NLKTLDLSGMSLASLSASSINLASISKLDLSNNNIQKIPESLVARMLNLWALDLQSNQLK 120

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGC-LRK 176
           +LP  +  L  L+ LN+S N  YL+ LP +I    SL EL+ ++N++T LPD+IG  L+ 
Sbjct: 121 TLPNSIGCLSKLKFLNVSGN--YLQFLPKTIEDCRSLEELNANFNELTRLPDAIGFELKN 178

Query: 177 LQKLSLEGNPLVSPPMDV 194
           L KLS+  N LV  P  V
Sbjct: 179 LTKLSVNSNKLVLLPNSV 196


>gi|115460388|ref|NP_001053794.1| Os04g0605300 [Oryza sativa Japonica Group]
 gi|38346910|emb|CAE03882.2| OSJNBb0015N08.10 [Oryza sativa Japonica Group]
 gi|113565365|dbj|BAF15708.1| Os04g0605300 [Oryza sativa Japonica Group]
 gi|125549626|gb|EAY95448.1| hypothetical protein OsI_17289 [Oryza sativa Indica Group]
 gi|125591552|gb|EAZ31902.1| hypothetical protein OsJ_16067 [Oryza sativa Japonica Group]
 gi|215692656|dbj|BAG88076.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215694832|dbj|BAG90023.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215737669|dbj|BAG96799.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 352

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 184/278 (66%), Positives = 221/278 (79%), Gaps = 3/278 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPES+ ARLLNVVVLDV SNQLK LPNSIGCLSKLKVL+VSGNLLESLP TIE CR+LEE
Sbjct: 68  IPESIIARLLNVVVLDVRSNQLKSLPNSIGCLSKLKVLNVSGNLLESLPNTIEECRALEE 127

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ANFN+L +LPDT+GFEL +L+ LS+N NK+  LP S +H+T+LR LDARLNCL++LP+
Sbjct: 128 LHANFNELTKLPDTLGFELHSLRKLSVNSNKLAQLPSSTSHMTALRALDARLNCLRALPD 187

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            LENL NLE LN+SQNFQ+L  LPY++GLL SL ELDVSYN I  LPDS+GCL KL + S
Sbjct: 188 GLENLANLEALNVSQNFQFLRELPYAVGLLASLRELDVSYNSIAALPDSMGCLTKLARFS 247

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGAL---RN 238
             GNPLVSPPMDVVEQGL A++ YL+ +MN      KKK+W+ KLVKY TF   +   R 
Sbjct: 248 AVGNPLVSPPMDVVEQGLDAMRAYLTARMNGGDGKRKKKAWLPKLVKYSTFTARMTPGRT 307

Query: 239 HRSEERERFIMSDFRAIDGLASPRHIGMFSPRRLFSPR 276
              E  E  +MSD+R+++G+ASPR + M SPRRLFSPR
Sbjct: 308 RVHENTEGLLMSDYRSLNGIASPRFLTMLSPRRLFSPR 345



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 3/154 (1%)

Query: 39  LDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ 98
           LD+SG  +++LP    +   +  L+ + N L  +P++I   L+N+  L +  N++  LP 
Sbjct: 35  LDMSGMSMDALPHLTMSLGQVTILDLSNNNLESIPESIIARLLNVVVLDVRSNQLKSLPN 94

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL-LMSLVEL 157
           S+  L+ L+VL+   N L+SLP  +E    LE L+   NF  L  LP ++G  L SL +L
Sbjct: 95  SIGCLSKLKVLNVSGNLLESLPNTIEECRALEELH--ANFNELTKLPDTLGFELHSLRKL 152

Query: 158 DVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            V+ NK+  LP S   +  L+ L    N L + P
Sbjct: 153 SVNSNKLAQLPSSTSHMTALRALDARLNCLRALP 186


>gi|357449671|ref|XP_003595112.1| Leucine-rich repeat-containing protein [Medicago truncatula]
 gi|355484160|gb|AES65363.1| Leucine-rich repeat-containing protein [Medicago truncatula]
          Length = 353

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 189/275 (68%), Positives = 226/275 (82%), Gaps = 5/275 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPESLTARLLN+ +LDVHSNQL+ LPNSIGCLSKLKVL+VSGN ++SLP TIENCR+LEE
Sbjct: 80  IPESLTARLLNLEMLDVHSNQLRSLPNSIGCLSKLKVLNVSGNFIQSLPATIENCRALEE 139

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN NFN L +LPDTIGFELI LK L++N NK+V LP+S +H+ +L VLD RLNCL+SLP+
Sbjct: 140 LNLNFNMLSKLPDTIGFELIKLKKLAVNSNKLVCLPRSTSHMMTLMVLDVRLNCLRSLPD 199

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           DLENL+NLE LN+SQNF+YLE+LPYSIGLL+SLVELDVSYN I TLPDSIGCL+KLQKLS
Sbjct: 200 DLENLVNLETLNVSQNFRYLESLPYSIGLLLSLVELDVSYNNIKTLPDSIGCLQKLQKLS 259

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGALRNHRS 241
           +EGNPL+SPP +VVEQGL  VK Y+  KMN+ H  P KK W   +VK GTFNG ++  RS
Sbjct: 260 VEGNPLISPPQEVVEQGLHVVKEYMCNKMNSSHHIPTKKRWW--MVKCGTFNGEMK--RS 315

Query: 242 EERERFIMSDFRAIDGLASPRHIGMFSPRRLFSPR 276
           E +  F    ++ ++GLASP  +G  SP RLFSPR
Sbjct: 316 EHKG-FHKLHYQPMNGLASPGFMGRLSPLRLFSPR 349


>gi|297798998|ref|XP_002867383.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313219|gb|EFH43642.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 369

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 193/283 (68%), Positives = 233/283 (82%), Gaps = 3/283 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPESLTARLLN++ LD+HSNQ+K LPNSIGCLSKLK+L+VSGN L SLP+TI+NCRSLEE
Sbjct: 87  IPESLTARLLNLIALDIHSNQIKALPNSIGCLSKLKILNVSGNFLVSLPQTIQNCRSLEE 146

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LNANFN+L +LPD IG EL NL+ L +N NK++ LP ++T+LTSLRVLDARLNCL  LPE
Sbjct: 147 LNANFNELIRLPDNIGLELTNLRKLCVNSNKLISLPTTITYLTSLRVLDARLNCLMILPE 206

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           DLENLINLE+LN+SQNFQYL  LP SIGLL++L+ELD+SYNKIT LP+SIGC+R+L+KLS
Sbjct: 207 DLENLINLEILNVSQNFQYLSALPSSIGLLLNLLELDISYNKITVLPESIGCMRRLRKLS 266

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNND--HKSPKKKSW-VGKLVKYGTFNGALRN 238
            EGNPLVSPP++VVEQ L AV+ YLS+KMN    + + KKK+W   KLVKYGTFNG  R 
Sbjct: 267 AEGNPLVSPPIEVVEQSLQAVREYLSQKMNGKLVNSAAKKKTWGFRKLVKYGTFNGRSRA 326

Query: 239 HRSEERERFIMSDFRAIDGLASPRHIGMFSPRRLFSPRSYFTK 281
              EERE  IM ++R ID L S +   M SPR LFSPR+YF++
Sbjct: 327 WTREEREGLIMPEYRPIDILTSTKFPVMCSPRLLFSPRTYFSR 369



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 99/161 (61%), Gaps = 3/161 (1%)

Query: 35  KLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
           +L+V+++SG  L+SLP    N  ++ +L+ + N ++++P+++   L+NL  L I+ N+I 
Sbjct: 50  RLEVVNLSGMALQSLPNPSLNLANICKLDLSNNHIKKIPESLTARLLNLIALDIHSNQIK 109

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL-LMS 153
            LP S+  L+ L++L+   N L SLP+ ++N  +LE LN   NF  L  LP +IGL L +
Sbjct: 110 ALPNSIGCLSKLKILNVSGNFLVSLPQTIQNCRSLEELN--ANFNELIRLPDNIGLELTN 167

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L +L V+ NK+ +LP +I  L  L+ L    N L+  P D+
Sbjct: 168 LRKLCVNSNKLISLPTTITYLTSLRVLDARLNCLMILPEDL 208


>gi|79490247|ref|NP_194717.2| plant intracellular ras group-related LRR 7 [Arabidopsis thaliana]
 gi|57868156|gb|AAW57416.1| plant intracellular Ras-group-related LRR protein 7 [Arabidopsis
           thaliana]
 gi|332660288|gb|AEE85688.1| plant intracellular ras group-related LRR 7 [Arabidopsis thaliana]
          Length = 373

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 194/283 (68%), Positives = 232/283 (81%), Gaps = 3/283 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPESLTARLLN++ LD+HSNQ+K LPNSIGCLSKLK+L+VSGN L SLP+TI+NCRSLEE
Sbjct: 91  IPESLTARLLNLIALDIHSNQIKALPNSIGCLSKLKILNVSGNFLVSLPQTIQNCRSLEE 150

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LNANFN+L +LPD IG EL NLK L +N NK++ LP ++T LTSLRVLDARLNCL  LPE
Sbjct: 151 LNANFNELIRLPDNIGLELTNLKKLCVNSNKLISLPATITCLTSLRVLDARLNCLMILPE 210

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           DLENLINLE+LN+SQNFQYL  LP SIGLL++L+ELD+SYNKIT LP+SIGC+R+L+KLS
Sbjct: 211 DLENLINLEILNVSQNFQYLSALPSSIGLLLNLLELDISYNKITVLPESIGCMRRLRKLS 270

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNND--HKSPKKKSW-VGKLVKYGTFNGALRN 238
            EGNPLVSPP++VVEQ L AV+ YLS+KMN    + + KKK+W   KLVKYGTFNG  R 
Sbjct: 271 AEGNPLVSPPIEVVEQSLHAVREYLSQKMNGKLVNTAAKKKTWGFRKLVKYGTFNGRSRV 330

Query: 239 HRSEERERFIMSDFRAIDGLASPRHIGMFSPRRLFSPRSYFTK 281
              EERE  IM ++R ID L S +     SPRRLFSPR+YF++
Sbjct: 331 WTREEREGLIMPEYRPIDILTSTKFPVTCSPRRLFSPRTYFSR 373



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 100/161 (62%), Gaps = 3/161 (1%)

Query: 35  KLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
           +L+V+++SG  L+SLP    N  ++ +L+ + N ++++P+++   L+NL  L I+ N+I 
Sbjct: 54  RLEVVNLSGMALQSLPNPSLNLANICKLDLSNNHIKKIPESLTARLLNLIALDIHSNQIK 113

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL-LMS 153
            LP S+  L+ L++L+   N L SLP+ ++N  +LE LN   NF  L  LP +IGL L +
Sbjct: 114 ALPNSIGCLSKLKILNVSGNFLVSLPQTIQNCRSLEELN--ANFNELIRLPDNIGLELTN 171

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L +L V+ NK+ +LP +I CL  L+ L    N L+  P D+
Sbjct: 172 LKKLCVNSNKLISLPATITCLTSLRVLDARLNCLMILPEDL 212


>gi|357165652|ref|XP_003580452.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Brachypodium
           distachyon]
          Length = 365

 Score =  365 bits (937), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 183/284 (64%), Positives = 221/284 (77%), Gaps = 9/284 (3%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPES+ ARLLNVVVLDV SNQLK LPNSIGCLSKL+VL+VSGNLLESLP TIE CR+LEE
Sbjct: 76  IPESVIARLLNVVVLDVRSNQLKSLPNSIGCLSKLRVLNVSGNLLESLPATIEECRALEE 135

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LNANFN+L +LPDT+GFEL +L+ LS+N NK+  LP S +H+T+LR LDARLNC+++LP+
Sbjct: 136 LNANFNQLTRLPDTLGFELHSLRKLSVNSNKLASLPFSTSHMTALRALDARLNCIRALPD 195

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            LENLINLEVLN+SQNF +L  LPY++GLL SL ELDVSYN I+ LPDS+GCL KL K S
Sbjct: 196 GLENLINLEVLNVSQNFHFLRELPYAVGLLTSLRELDVSYNSISVLPDSMGCLTKLAKFS 255

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDH-KSPKKKSWVGKLVKYGTFNGAL---- 236
             GNPLV PPMD+VEQ L A++ YLS +MN     + KKK WV KLVKY TF+G +    
Sbjct: 256 AVGNPLVCPPMDIVEQSLDAMRAYLSSRMNGTGVNAKKKKGWVPKLVKYSTFSGRMTPGR 315

Query: 237 ----RNHRSEERERFIMSDFRAIDGLASPRHIGMFSPRRLFSPR 276
               R    +  E  +MSD+R++ G+ASP  + M SPRRLFSPR
Sbjct: 316 MTPGRKSAHDNSEGLLMSDYRSLHGVASPGFLSMLSPRRLFSPR 359



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 82/147 (55%), Gaps = 3/147 (2%)

Query: 35  KLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
           K K LD+SG  +++LP    +   +  L+ + N L  +P+++   L+N+  L +  N++ 
Sbjct: 39  KEKKLDMSGMSMDTLPHITMSLGHITTLDLSNNNLESIPESVIARLLNVVVLDVRSNQLK 98

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL-LMS 153
            LP S+  L+ LRVL+   N L+SLP  +E    LE LN   NF  L  LP ++G  L S
Sbjct: 99  SLPNSIGCLSKLRVLNVSGNLLESLPATIEECRALEELN--ANFNQLTRLPDTLGFELHS 156

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKL 180
           L +L V+ NK+ +LP S   +  L+ L
Sbjct: 157 LRKLSVNSNKLASLPFSTSHMTALRAL 183


>gi|82780766|gb|ABB90552.1| leucine-rich repeat protein 1 [Triticum aestivum]
          Length = 365

 Score =  360 bits (923), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 178/279 (63%), Positives = 219/279 (78%), Gaps = 4/279 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPES+ ARLLNVVVLDV SNQLK LPNSIGCLSKL+VL+VSGNLL+SLP TIE CR+LEE
Sbjct: 80  IPESMIARLLNVVVLDVRSNQLKSLPNSIGCLSKLRVLNVSGNLLQSLPATIEECRALEE 139

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LNANFN+L +LPDT+GFEL +L+ LS+N NK+  LP S +H+T+LR LDARLNC+++LPE
Sbjct: 140 LNANFNQLTRLPDTLGFELHSLRRLSVNSNKLTSLPFSTSHMTALRALDARLNCIRALPE 199

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            LENL+NLEVLN+SQNF +L  LPY +GLL SL ELD+SYN I+ LPDS+GCL KL K S
Sbjct: 200 GLENLVNLEVLNVSQNFHFLRELPYGLGLLTSLRELDISYNSISVLPDSMGCLAKLNKFS 259

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDH-KSPKKKSWVGKLVKYGTFNGAL---R 237
             GNPLV PPMD+VEQ L A++ YLS +MN     + KKK W+ ++VKY TF+G +   R
Sbjct: 260 AVGNPLVCPPMDIVEQSLDAMRTYLSSRMNGTGVNAKKKKGWLPRMVKYNTFSGRMTPGR 319

Query: 238 NHRSEERERFIMSDFRAIDGLASPRHIGMFSPRRLFSPR 276
               +  E F MSD+ +++G ASP  + M SPRRLFSPR
Sbjct: 320 KSAHDNSEGFSMSDYHSLNGSASPGFLSMLSPRRLFSPR 358



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 82/147 (55%), Gaps = 3/147 (2%)

Query: 35  KLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
           K K LD+SG  ++++P    +   +  L+ + N L  +P+++   L+N+  L +  N++ 
Sbjct: 43  KEKKLDMSGLSMDTIPHLTMSLGHITTLDLSNNNLESIPESMIARLLNVVVLDVRSNQLK 102

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL-LMS 153
            LP S+  L+ LRVL+   N L+SLP  +E    LE LN   NF  L  LP ++G  L S
Sbjct: 103 SLPNSIGCLSKLRVLNVSGNLLQSLPATIEECRALEELN--ANFNQLTRLPDTLGFELHS 160

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKL 180
           L  L V+ NK+T+LP S   +  L+ L
Sbjct: 161 LRRLSVNSNKLTSLPFSTSHMTALRAL 187


>gi|195613110|gb|ACG28385.1| leucine-rich repeat-containing protein 40 [Zea mays]
          Length = 363

 Score =  359 bits (922), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 186/287 (64%), Positives = 220/287 (76%), Gaps = 8/287 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPES+ ARLLNVVVLDV SNQLK LPNSIGCLSKLKVL+VSGNLL+ LP TIE CR+LEE
Sbjct: 77  IPESIIARLLNVVVLDVRSNQLKSLPNSIGCLSKLKVLNVSGNLLQELPATIEECRALEE 136

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LNANFN+L +LPDT+GFEL  L+ LS+N NK+  LP S +H+T+LR LDARLNCL++LP+
Sbjct: 137 LNANFNQLTRLPDTLGFELHGLRRLSVNSNKLAYLPSSTSHMTALRSLDARLNCLRALPD 196

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            LENL  LE LN+SQNFQYL  LPY IGLL+SL ELDVSYN I  LPDS+GCL KL + S
Sbjct: 197 GLENLGGLEALNVSQNFQYLRELPYGIGLLVSLRELDVSYNSIAALPDSMGCLTKLARFS 256

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFN-GALRNHR 240
             GNPLV PPMDVVEQ L A++ YLS +MN   K+ KKKSWV KLVKY TF+ G +   R
Sbjct: 257 AAGNPLVCPPMDVVEQSLDAMRAYLSARMNGTAKA-KKKSWVPKLVKYSTFSAGMMTPGR 315

Query: 241 SE----ERERFIMSDFRAID--GLASPRHIGMFSPRRLFSPRSYFTK 281
           ++      +   MSD+R++D  G+AS   + M SPRRLFSPR   TK
Sbjct: 316 TKVHGNNTDGLHMSDYRSLDGGGVASSAFLSMLSPRRLFSPRRNSTK 362



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 81/156 (51%), Gaps = 3/156 (1%)

Query: 37  KVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVIL 96
           K LD+S   +++LP       ++  L+ + N L+ +P++I   L+N+  L +  N++  L
Sbjct: 42  KKLDMSSMSMDTLPHLTTPLGNITTLDLSNNNLQSIPESIIARLLNVVVLDVRSNQLKSL 101

Query: 97  PQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL-LMSLV 155
           P S+  L+ L+VL+   N L+ LP  +E    LE LN   NF  L  LP ++G  L  L 
Sbjct: 102 PNSIGCLSKLKVLNVSGNLLQELPATIEECRALEELN--ANFNQLTRLPDTLGFELHGLR 159

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            L V+ NK+  LP S   +  L+ L    N L + P
Sbjct: 160 RLSVNSNKLAYLPSSTSHMTALRSLDARLNCLRALP 195


>gi|242077088|ref|XP_002448480.1| hypothetical protein SORBIDRAFT_06g027760 [Sorghum bicolor]
 gi|241939663|gb|EES12808.1| hypothetical protein SORBIDRAFT_06g027760 [Sorghum bicolor]
          Length = 363

 Score =  358 bits (919), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 183/285 (64%), Positives = 218/285 (76%), Gaps = 6/285 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPES+ ARLLNVVVLDV SNQLK LPNSIGCLSKLKVL+VSGNLL+ LP TIE CR+LEE
Sbjct: 79  IPESIIARLLNVVVLDVRSNQLKSLPNSIGCLSKLKVLNVSGNLLQELPATIEECRALEE 138

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LNANFN+L +LPDT+GFEL  L+ LS+N NK+  LP S +H+T+LR LDARLNCL++LP+
Sbjct: 139 LNANFNQLTRLPDTLGFELHGLRRLSVNSNKLAYLPSSTSHMTALRSLDARLNCLRALPD 198

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            LENL  LE LN+SQNFQYL  LPY IGLL+SL ELDVSYN I  LPDS+GCL KL + S
Sbjct: 199 GLENLGGLETLNVSQNFQYLRELPYGIGLLVSLRELDVSYNSIAALPDSMGCLTKLARFS 258

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGALRN--- 238
             GNPLV PPMDVVEQ L A++ YLS +MN   K+ KKKSWV KLVKY TF+  +     
Sbjct: 259 AAGNPLVCPPMDVVEQSLDAMRAYLSARMNGTAKA-KKKSWVPKLVKYSTFSAGMMTPGR 317

Query: 239 HRSEERERFIMSDFRAI--DGLASPRHIGMFSPRRLFSPRSYFTK 281
            ++   +   MSD++++   G+ASP  + M SPRRLFSPR   TK
Sbjct: 318 TKNNSTDGLHMSDYQSLHGGGIASPGFLSMLSPRRLFSPRRNSTK 362



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 3/156 (1%)

Query: 37  KVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVIL 96
           K LD+SG  +++LP       ++  L+ + N L+ +P++I   L+N+  L +  N++  L
Sbjct: 44  KKLDMSGMCMDTLPHLTTPLGNITTLDLSNNNLQSIPESIIARLLNVVVLDVRSNQLKSL 103

Query: 97  PQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL-LMSLV 155
           P S+  L+ L+VL+   N L+ LP  +E    LE LN   NF  L  LP ++G  L  L 
Sbjct: 104 PNSIGCLSKLKVLNVSGNLLQELPATIEECRALEELN--ANFNQLTRLPDTLGFELHGLR 161

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            L V+ NK+  LP S   +  L+ L    N L + P
Sbjct: 162 RLSVNSNKLAYLPSSTSHMTALRSLDARLNCLRALP 197


>gi|308080012|ref|NP_001183644.1| uncharacterized protein LOC100502238 [Zea mays]
 gi|238013634|gb|ACR37852.1| unknown [Zea mays]
 gi|414585564|tpg|DAA36135.1| TPA: leucine-rich repeat-containing protein 40 [Zea mays]
          Length = 363

 Score =  358 bits (918), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 184/282 (65%), Positives = 218/282 (77%), Gaps = 8/282 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPES+ ARLLNVVVLDV SNQLK LPNSIGCLSKLKVL+VSGNLL+ LP TIE CR+LEE
Sbjct: 77  IPESIIARLLNVVVLDVRSNQLKSLPNSIGCLSKLKVLNVSGNLLQELPATIEECRALEE 136

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LNANFN+L +LPDT+GFEL  L+ LS+N NK+  LP S +H+T+LR LDARLNCL++LP+
Sbjct: 137 LNANFNQLTRLPDTLGFELHGLRRLSVNSNKLAYLPSSTSHMTALRSLDARLNCLRALPD 196

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            LENL  LE LN+SQNFQYL  LPY IGLL+SL ELDVSYN I  LPDS+GCL KL + S
Sbjct: 197 GLENLGGLEALNVSQNFQYLRELPYGIGLLVSLRELDVSYNSIAALPDSMGCLTKLARFS 256

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFN-GALRNHR 240
             GNPLV PPMDVVEQ L A++ YLS +MN   K+ KKKSWV KLVKY TF+ G +   R
Sbjct: 257 AAGNPLVCPPMDVVEQSLDAMRAYLSARMNGTAKA-KKKSWVPKLVKYSTFSAGMMTPGR 315

Query: 241 SE----ERERFIMSDFRAID--GLASPRHIGMFSPRRLFSPR 276
           ++      +   MSD+R++D  G+AS   + M SPRRLFSPR
Sbjct: 316 TKVHGNNTDGLHMSDYRSLDGGGVASSAFLSMLSPRRLFSPR 357



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 81/156 (51%), Gaps = 3/156 (1%)

Query: 37  KVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVIL 96
           K LD+S   +++LP       ++  L+ + N L+ +P++I   L+N+  L +  N++  L
Sbjct: 42  KKLDMSSMSMDTLPHLTTPLGNITTLDLSNNNLQSIPESIIARLLNVVVLDVRSNQLKSL 101

Query: 97  PQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL-LMSLV 155
           P S+  L+ L+VL+   N L+ LP  +E    LE LN   NF  L  LP ++G  L  L 
Sbjct: 102 PNSIGCLSKLKVLNVSGNLLQELPATIEECRALEELN--ANFNQLTRLPDTLGFELHGLR 159

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            L V+ NK+  LP S   +  L+ L    N L + P
Sbjct: 160 RLSVNSNKLAYLPSSTSHMTALRSLDARLNCLRALP 195


>gi|82780768|gb|ABB90553.1| leucine-rich repeat protein 2 [Triticum aestivum]
          Length = 362

 Score =  355 bits (912), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 176/279 (63%), Positives = 217/279 (77%), Gaps = 4/279 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPES+ ARLL VVVLDV SNQLK LPNSIGCLSKL+VL+VSGNLL+SLP TIE CR+LEE
Sbjct: 77  IPESMIARLLKVVVLDVRSNQLKSLPNSIGCLSKLRVLNVSGNLLQSLPATIEECRALEE 136

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LNANFN+L +LPDT+GFEL +L+ LS+N NK+  LP S +H+T+LR LDARLNC+++LPE
Sbjct: 137 LNANFNQLTRLPDTLGFELHSLRRLSVNSNKLTSLPFSTSHMTALRALDARLNCIRALPE 196

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            LENL+NLEVLN+SQNF +L  LPY +GLL SL ELD+SYN I+ LPDS+GCL KL K S
Sbjct: 197 GLENLVNLEVLNVSQNFHFLRELPYGLGLLTSLRELDISYNSISVLPDSMGCLAKLNKFS 256

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDH-KSPKKKSWVGKLVKYGTFNGAL---R 237
             GNPLV PPMD+VEQ L A++ YLS +MN     + KKK W+ ++VKY TF+  +   R
Sbjct: 257 AVGNPLVCPPMDIVEQSLDAMRTYLSSRMNGTGVNAKKKKGWLPRMVKYNTFSARMTPGR 316

Query: 238 NHRSEERERFIMSDFRAIDGLASPRHIGMFSPRRLFSPR 276
               +  E F MSD+ +++G ASP  + M SPRRLFSPR
Sbjct: 317 KSAHDNSEGFSMSDYHSLNGSASPGFLSMLSPRRLFSPR 355



 Score = 70.9 bits (172), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 81/147 (55%), Gaps = 3/147 (2%)

Query: 35  KLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
           K K LD+SG  ++++P    +   +  L+ + N L  +P+++   L+ +  L +  N++ 
Sbjct: 40  KEKKLDMSGLSMDTIPHLTMSLGHITTLDLSNNNLESIPESMIARLLKVVVLDVRSNQLK 99

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL-LMS 153
            LP S+  L+ LRVL+   N L+SLP  +E    LE LN   NF  L  LP ++G  L S
Sbjct: 100 SLPNSIGCLSKLRVLNVSGNLLQSLPATIEECRALEELN--ANFNQLTRLPDTLGFELHS 157

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKL 180
           L  L V+ NK+T+LP S   +  L+ L
Sbjct: 158 LRRLSVNSNKLTSLPFSTSHMTALRAL 184


>gi|4914412|emb|CAB43663.1| putative protein [Arabidopsis thaliana]
 gi|7269887|emb|CAB79746.1| putative protein [Arabidopsis thaliana]
          Length = 404

 Score =  355 bits (910), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 194/314 (61%), Positives = 232/314 (73%), Gaps = 34/314 (10%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCR---- 57
           IPESLTARLLN++ LD+HSNQ+K LPNSIGCLSKLK+L+VSGN L SLP+TI+NCR    
Sbjct: 91  IPESLTARLLNLIALDIHSNQIKALPNSIGCLSKLKILNVSGNFLVSLPQTIQNCRFHTS 150

Query: 58  ---------------------------SLEELNANFNKLRQLPDTIGFELINLKTLSINC 90
                                      SLEELNANFN+L +LPD IG EL NLK L +N 
Sbjct: 151 TKSGPNQSYMMIMLINSSVFFCFGFSRSLEELNANFNELIRLPDNIGLELTNLKKLCVNS 210

Query: 91  NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL 150
           NK++ LP ++T LTSLRVLDARLNCL  LPEDLENLINLE+LN+SQNFQYL  LP SIGL
Sbjct: 211 NKLISLPATITCLTSLRVLDARLNCLMILPEDLENLINLEILNVSQNFQYLSALPSSIGL 270

Query: 151 LMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKM 210
           L++L+ELD+SYNKIT LP+SIGC+R+L+KLS EGNPLVSPP++VVEQ L AV+ YLS+KM
Sbjct: 271 LLNLLELDISYNKITVLPESIGCMRRLRKLSAEGNPLVSPPIEVVEQSLHAVREYLSQKM 330

Query: 211 NND--HKSPKKKSW-VGKLVKYGTFNGALRNHRSEERERFIMSDFRAIDGLASPRHIGMF 267
           N    + + KKK+W   KLVKYGTFNG  R    EERE  IM ++R ID L S +     
Sbjct: 331 NGKLVNTAAKKKTWGFRKLVKYGTFNGRSRVWTREEREGLIMPEYRPIDILTSTKFPVTC 390

Query: 268 SPRRLFSPRSYFTK 281
           SPRRLFSPR+YF++
Sbjct: 391 SPRRLFSPRTYFSR 404



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 95/168 (56%), Gaps = 7/168 (4%)

Query: 35  KLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
           +L+V+++SG  L+SLP    N  ++ +L+ + N ++++P+++   L+NL  L I+ N+I 
Sbjct: 54  RLEVVNLSGMALQSLPNPSLNLANICKLDLSNNHIKKIPESLTARLLNLIALDIHSNQIK 113

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL------ETLPYSI 148
            LP S+  L+ L++L+   N L SLP+ ++N           N  Y+       ++ +  
Sbjct: 114 ALPNSIGCLSKLKILNVSGNFLVSLPQTIQNCRFHTSTKSGPNQSYMMIMLINSSVFFCF 173

Query: 149 GLLMSLVELDVSYNKITTLPDSIGC-LRKLQKLSLEGNPLVSPPMDVV 195
           G   SL EL+ ++N++  LPD+IG  L  L+KL +  N L+S P  + 
Sbjct: 174 GFSRSLEELNANFNELIRLPDNIGLELTNLKKLCVNSNKLISLPATIT 221


>gi|168052852|ref|XP_001778853.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669722|gb|EDQ56303.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 277

 Score =  194 bits (494), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 108/220 (49%), Positives = 146/220 (66%), Gaps = 1/220 (0%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +P+S+ A L+N+ VLD+  NQLK LP+SIG LSKL  LDVSGN L  LP ++  C +L 
Sbjct: 52  FLPDSI-AGLVNLEVLDLQHNQLKLLPDSIGLLSKLNSLDVSGNQLRVLPASLGRCSALV 110

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL ANFN+L   P   GF+L NL+ L ++ NK+  LP S+  L +LRVLD   N L+ LP
Sbjct: 111 ELIANFNELEMWPSDFGFQLSNLQILRLHLNKLTCLPPSVGELRALRVLDVHFNKLRGLP 170

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             + NL NL +L++S NF+    LP S+G L+SL ELD+S+N++  LP SIG L  L+KL
Sbjct: 171 STIGNLTNLSILDVSSNFKDFAALPDSVGDLVSLTELDLSFNQLHELPISIGRLTNLKKL 230

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKK 220
            L+ NPLV PPM++VEQG   V  Y++E      KS ++K
Sbjct: 231 KLDENPLVVPPMEIVEQGHEVVMKYMAELWTESLKSEEEK 270



 Score = 37.4 bits (85), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 30/49 (61%)

Query: 139 QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           Q L  +P S G + SL+ L++S N++  LPDSI  L  L+ L L+ N L
Sbjct: 25  QLLSHVPESFGRITSLIVLNLSNNRLEFLPDSIAGLVNLEVLDLQHNQL 73


>gi|356513766|ref|XP_003525581.1| PREDICTED: uncharacterized protein LOC100782818 [Glycine max]
          Length = 511

 Score =  192 bits (488), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 106/209 (50%), Positives = 142/209 (67%), Gaps = 1/209 (0%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP+S++  L N+  L++ SN L+ LP+SIG L KLK L+VSGN L +LP +I  CRSL 
Sbjct: 247 VIPDSISG-LANLEELNLSSNALESLPDSIGLLQKLKFLNVSGNKLSALPDSISQCRSLV 305

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+A FN L  LP  IG+EL+NL+ L I  NKI  LP S+  + SLR LDA  N L+ LP
Sbjct: 306 ELDAGFNSLTYLPTNIGYELLNLQKLMIQLNKIRSLPSSVCEMKSLRYLDAHFNELRGLP 365

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             +  L NLEVLN+S NF  L  LP + G L+SL ELD+S N+I  LPD+ G L  L KL
Sbjct: 366 IAIGKLTNLEVLNLSSNFSDLRELPETFGDLISLRELDLSNNQIHALPDTFGRLDSLTKL 425

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEK 209
           +L+ NP+  PPM++V QG+ AVK ++ ++
Sbjct: 426 NLDQNPVEVPPMEIVNQGVQAVKSFMVQR 454



 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 66/112 (58%), Gaps = 2/112 (1%)

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           ++ + ++  ++ +LP +  H+ +L VLD   N L  +P+ +  L NLE LN+S N   LE
Sbjct: 212 IERVDLSGKRLKLLPPAFGHIPALVVLDVSTNQLSVIPDSISGLANLEELNLSSN--ALE 269

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +LP SIGLL  L  L+VS NK++ LPDSI   R L +L    N L   P ++
Sbjct: 270 SLPDSIGLLQKLKFLNVSGNKLSALPDSISQCRSLVELDAGFNSLTYLPTNI 321


>gi|357164161|ref|XP_003579968.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Brachypodium
           distachyon]
          Length = 505

 Score =  188 bits (477), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 110/273 (40%), Positives = 167/273 (61%), Gaps = 22/273 (8%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP+++  RL ++  L + SN L  LP+S+G LS LK+L+VS N L +LP +I  CRSL 
Sbjct: 234 VIPDAI-GRLDHLEELLLASNALVSLPDSVGLLSNLKILNVSSNKLRTLPDSISKCRSLV 292

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+A++N L  LP  IG+EL+NL+ L ++ NK+   P S+  + SL +LDA  N L  LP
Sbjct: 293 ELDASYNGLTYLPTNIGYELVNLRKLWVHMNKLRSFPSSICEMQSLYLLDAHFNELCGLP 352

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             +  L +LE+LN+S NF  ++ LP+S G L+ L ELD+S N+I  LPDS G L +L+KL
Sbjct: 353 SAIGKLSSLEILNLSSNFSDMKELPFSFGDLLKLRELDLSNNQIHALPDSFGRLDRLEKL 412

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEK-----MNNDHK--------SPKK---KSWVG 224
           +LE NPL  PP D+V +G+ AVK Y+S++     +  + K        SP+    K+W+ 
Sbjct: 413 NLEQNPLAMPPSDIVNKGVDAVKEYMSKRWLDALLEEEQKSMAAAAAESPQASTPKAWLA 472

Query: 225 KLVKY-----GTFNGALRNHRSEERERFIMSDF 252
           + V +     G+  G +  H   E++ ++   F
Sbjct: 473 RSVSWVSDVSGSVVGYVSGHNKPEKDAYLDQQF 505



 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 33/54 (61%)

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L  LP + G +  L  LDVS+N++  +PD+IG L  L++L L  N LVS P  V
Sbjct: 209 LRFLPEAFGRIQGLRVLDVSHNQLEVIPDAIGRLDHLEELLLASNALVSLPDSV 262


>gi|449440622|ref|XP_004138083.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Cucumis
           sativus]
 gi|449526497|ref|XP_004170250.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Cucumis
           sativus]
          Length = 523

 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 102/209 (48%), Positives = 143/209 (68%), Gaps = 1/209 (0%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP+S++  L N+  L+  SN L+ LP+SIG L KLK+L+VS N L +LP TI +CRSL 
Sbjct: 254 IIPDSISG-LENLEELNASSNLLESLPDSIGLLQKLKLLNVSANKLHALPDTICHCRSLV 312

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN L  LP  IG EL+NL+ L++  NK+  LP S+  ++SLR LDA  N L  LP
Sbjct: 313 ELDVSFNSLTYLPTNIGLELVNLEKLAVQLNKLRSLPSSVCGMSSLRYLDAHFNELHGLP 372

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           + +  L  LE LN+S NF  L  LP++ G L+SL ELD+S N+I  LPD+ G L  L+KL
Sbjct: 373 QAIGKLTKLEYLNLSSNFTDLTELPHTFGDLISLRELDLSNNQIHALPDTFGHLENLKKL 432

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEK 209
           ++E NPL  PPM+VV +G  AV+ ++S++
Sbjct: 433 NVEQNPLTVPPMEVVSKGPDAVRTFMSKR 461



 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 34/62 (54%)

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           E+  IS   + L  LP   G +  LV LD+S N++  +PDSI  L  L++L+   N L S
Sbjct: 218 EMDRISLTGRRLRFLPEEFGHIRGLVVLDISSNQLQIIPDSISGLENLEELNASSNLLES 277

Query: 190 PP 191
            P
Sbjct: 278 LP 279


>gi|255540519|ref|XP_002511324.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223550439|gb|EEF51926.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 519

 Score =  185 bits (469), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/209 (50%), Positives = 147/209 (70%), Gaps = 1/209 (0%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP+S+ A L N+  L++ SN L+ LP+ IG L  LKVL+VS N LESLP +I +CRSL 
Sbjct: 249 VIPDSI-AGLENLDELNLASNLLEALPDFIGLLVNLKVLNVSSNKLESLPDSISHCRSLL 307

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN+L  LP  IG+EL+N+K LSI  NKI  LP S+  + SL+ LDA  N L+ LP
Sbjct: 308 ELDVSFNRLTYLPTNIGYELVNVKRLSIQLNKIRSLPTSIGEMRSLQHLDAHFNELQGLP 367

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
                LINLE+L +S NF  L+ LP ++G L +L ELD+S N+I TLPDS G L  L KL
Sbjct: 368 LSFGRLINLEILKLSSNFSDLKELPDTLGDLTNLKELDLSNNQIETLPDSFGRLDNLTKL 427

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEK 209
           +L+ NPL+ PP +VV++G+ AVK +++++
Sbjct: 428 NLDQNPLILPPPEVVKEGVEAVKIFMAKR 456



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 68/112 (60%), Gaps = 2/112 (1%)

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           L+ + ++  ++  LP++   ++ L+VLD   N L+ +P+ +  L NL+ LN++ N   LE
Sbjct: 214 LERVDLSNRRLRFLPEAFCRISGLKVLDLSNNQLEVIPDSIAGLENLDELNLASNL--LE 271

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LP  IGLL++L  L+VS NK+ +LPDSI   R L +L +  N L   P ++
Sbjct: 272 ALPDFIGLLVNLKVLNVSSNKLESLPDSISHCRSLLELDVSFNRLTYLPTNI 323


>gi|15239256|ref|NP_196204.1| plant intracellular ras group-related LRR 1 [Arabidopsis thaliana]
 gi|9759110|dbj|BAB09679.1| unnamed protein product [Arabidopsis thaliana]
 gi|53850485|gb|AAU95419.1| At5g05850 [Arabidopsis thaliana]
 gi|55733731|gb|AAV59262.1| At5g05850 [Arabidopsis thaliana]
 gi|57868144|gb|AAW57410.1| plant intracellular Ras-group-related LRR protein 1 [Arabidopsis
           thaliana]
 gi|110737851|dbj|BAF00864.1| hypothetical protein [Arabidopsis thaliana]
 gi|332003549|gb|AED90932.1| plant intracellular ras group-related LRR 1 [Arabidopsis thaliana]
          Length = 506

 Score =  184 bits (468), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/208 (51%), Positives = 143/208 (68%), Gaps = 1/208 (0%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+S+ A L N++ LDV +N L+ LP+SIG LSKLK+L+VS N L +LP +I +C SL  
Sbjct: 242 IPDSI-AGLHNLLELDVSTNFLETLPDSIGLLSKLKILNVSCNKLTTLPDSICHCGSLVV 300

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+A++N L  LP  IGFEL+ L+ L I+ NKI  LP S+  + SLR LDA  N L  LP 
Sbjct: 301 LDASYNNLTYLPTNIGFELVKLEKLLIHLNKIRSLPTSIGEMRSLRYLDAHFNELNGLPN 360

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
               L NLE LN+S NF  L+ LP S G L+SL ELD+S N+I +LPD+ G L  L KL+
Sbjct: 361 SFGLLTNLEYLNLSSNFSDLQDLPASFGDLISLQELDLSNNQIHSLPDAFGTLVNLTKLN 420

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEK 209
           L+ NPLV PP +VV+QG+ AVK Y+ ++
Sbjct: 421 LDQNPLVVPPDEVVKQGVDAVKMYMGKR 448



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 68/121 (56%), Gaps = 5/121 (4%)

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           L  + ++  K+ +LP++   +  L VL+   N L+++P+ +  L NL  L++S NF  LE
Sbjct: 206 LDRVDLSGRKLKLLPEAFGKIQGLLVLNLYNNQLQAIPDSIAGLHNLLELDVSTNF--LE 263

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAV 202
           TLP SIGLL  L  L+VS NK+TTLPDSI     L  L    N L   P ++   G   V
Sbjct: 264 TLPDSIGLLSKLKILNVSCNKLTTLPDSICHCGSLVVLDASYNNLTYLPTNI---GFELV 320

Query: 203 K 203
           K
Sbjct: 321 K 321


>gi|297810689|ref|XP_002873228.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319065|gb|EFH49487.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 506

 Score =  184 bits (467), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 107/208 (51%), Positives = 143/208 (68%), Gaps = 1/208 (0%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+S+ A L N++ LDV +N L+ LP+SIG LSKLK+L+VS N L +LP +I +C SL  
Sbjct: 242 IPDSI-AGLQNLLELDVSTNFLETLPDSIGLLSKLKILNVSCNKLTTLPDSICHCGSLVV 300

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+A++N L  LP  IGFEL+ ++ L I+ NKI  LP S+  + SLR LDA  N L  LP 
Sbjct: 301 LDASYNNLTYLPTNIGFELVKVEKLLIHLNKIRSLPTSIGEMRSLRYLDAHFNELNGLPN 360

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
               L NLE LN+S NF  L+ LP S G L+SL ELD+S N+I +LPD+ G L  L KL+
Sbjct: 361 SFGLLTNLEYLNLSSNFSDLQDLPASFGDLISLQELDLSNNQIHSLPDAFGTLVNLTKLN 420

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEK 209
           L+ NPLV PP +VV+QG+ AVK Y+ ++
Sbjct: 421 LDQNPLVVPPEEVVKQGVGAVKMYMGKR 448



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 68/121 (56%), Gaps = 5/121 (4%)

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           L  + ++  K+ +LP++   +  L VL+   N L+++P+ +  L NL  L++S NF  LE
Sbjct: 206 LDRVDLSGRKLKLLPEAFGKIQGLLVLNLYNNQLEAIPDSIAGLQNLLELDVSTNF--LE 263

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAV 202
           TLP SIGLL  L  L+VS NK+TTLPDSI     L  L    N L   P ++   G   V
Sbjct: 264 TLPDSIGLLSKLKILNVSCNKLTTLPDSICHCGSLVVLDASYNNLTYLPTNI---GFELV 320

Query: 203 K 203
           K
Sbjct: 321 K 321


>gi|148909879|gb|ABR18026.1| unknown [Picea sitchensis]
          Length = 524

 Score =  184 bits (467), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 102/202 (50%), Positives = 140/202 (69%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A L+N+  LD+  N L  LP+SIG L +LK L++SGN L+SLP +I  C  L EL+A++N
Sbjct: 257 AGLVNLETLDLSGNVLVSLPDSIGLLKRLKFLNISGNKLKSLPDSISMCSELIELDASYN 316

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP   G++L NL+ L +  NK+  LP S+  L SLR LD   N L+SLPE L +L 
Sbjct: 317 QLTYLPTNFGYQLANLQKLLVQLNKLRSLPSSVCELKSLRYLDVHFNELRSLPEALGDLK 376

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NLEVLN S NF  L +LP SIG L +LVELDVS N+I  LP S G L+ L+KL+L+ NPL
Sbjct: 377 NLEVLNASSNFSDLVSLPDSIGELTNLVELDVSNNQIKELPYSFGSLQNLKKLNLDQNPL 436

Query: 188 VSPPMDVVEQGLSAVKGYLSEK 209
           ++PP ++V QG+ AVK +++++
Sbjct: 437 MTPPNEIVVQGVEAVKEHMAKR 458



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/124 (39%), Positives = 74/124 (59%), Gaps = 3/124 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P +   +L N+  L V  N+L+ LP+S+  L  L+ LDV  N L SLP+ + + ++LE 
Sbjct: 321 LPTNFGYQLANLQKLLVQLNKLRSLPSSVCELKSLRYLDVHFNELRSLPEALGDLKNLEV 380

Query: 62  LNA--NFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
           LNA  NF+ L  LPD+IG EL NL  L ++ N+I  LP S   L +L+ L+   N L + 
Sbjct: 381 LNASSNFSDLVSLPDSIG-ELTNLVELDVSNNQIKELPYSFGSLQNLKKLNLDQNPLMTP 439

Query: 120 PEDL 123
           P ++
Sbjct: 440 PNEI 443


>gi|357461813|ref|XP_003601188.1| Leucine-rich-repeat protein [Medicago truncatula]
 gi|355490236|gb|AES71439.1| Leucine-rich-repeat protein [Medicago truncatula]
          Length = 510

 Score =  184 bits (467), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 104/209 (49%), Positives = 139/209 (66%), Gaps = 1/209 (0%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP+S+   L N+  L++ +N L+ LP+SIG L KLK+L+VSGN L +LP  I  CRSL 
Sbjct: 237 VIPDSIVG-LQNLEELNLSANHLESLPDSIGFLQKLKLLNVSGNKLTALPDAICQCRSLV 295

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN L  LP  IG+EL NLK L I  NKI  LP S+  L SL  LDA +N L  LP
Sbjct: 296 ELDVSFNDLSYLPTNIGYELPNLKKLMIQLNKIRSLPSSICELKSLCYLDAHVNELHGLP 355

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
                L  LE+LN+S NF  L+ LP + G L +L ELDVS N+I  LPD+ GCL  L KL
Sbjct: 356 AAFGRLTTLEILNLSSNFADLKELPETFGELTNLKELDVSNNQIHALPDTFGCLDNLTKL 415

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEK 209
           +LE NPL  PP+++V QG+ A+K +++++
Sbjct: 416 NLEQNPLELPPVEIVNQGVQAIKTFMAKR 444



 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 67/113 (59%), Gaps = 2/113 (1%)

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
            ++ + I+  K+ +LP++   +  L VLDA  N L  +P+ +  L NLE LN+S N  +L
Sbjct: 201 GMERIEISDRKLKVLPEAFGRIPGLLVLDASKNLLSVIPDSIVGLQNLEELNLSAN--HL 258

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           E+LP SIG L  L  L+VS NK+T LPD+I   R L +L +  N L   P ++
Sbjct: 259 ESLPDSIGFLQKLKLLNVSGNKLTALPDAICQCRSLVELDVSFNDLSYLPTNI 311


>gi|356508718|ref|XP_003523101.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Glycine max]
          Length = 513

 Score =  184 bits (466), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/235 (46%), Positives = 148/235 (62%), Gaps = 12/235 (5%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+S+ A L N+  L++ SN L+ LP+SIG L KLK+L+VSGN L +LP +I  CRSL E
Sbjct: 242 IPDSI-AGLQNLEELNLSSNLLESLPDSIGLLQKLKLLNVSGNKLTALPDSICQCRSLVE 300

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ +FN L  LP  IG+EL NL+ L I  NKI   P S+  L SL  LDA  N L  LP 
Sbjct: 301 LDVSFNNLSYLPTNIGYELPNLQKLMIYLNKIRSFPSSICELKSLHYLDAHFNELHGLPI 360

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L NLEVLN+S NF  L+ LP + G L +L ELD+S N+I  LPD+ G L  L KL+
Sbjct: 361 AIGRLTNLEVLNLSSNFSDLKELPETFGDLANLRELDLSNNQIHALPDTFGRLDNLIKLN 420

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSE-----------KMNNDHKSPKKKSWVGK 225
           LE NPL  PPM++V QGL A+K ++++           K N + + P++  W+ +
Sbjct: 421 LEQNPLELPPMEIVNQGLEAIKTFMAKRWLDILLEEERKSNQEMQEPEQGGWLTR 475



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 74/135 (54%), Gaps = 7/135 (5%)

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
           EE+N     + Q     G E I+L     +  ++ +LP++   ++ L V D   N L ++
Sbjct: 188 EEVNEEVVGILQEAYGKGMERIDL-----SGRQLKLLPEAFGRISGLLVFDLSTNQLSAI 242

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L NLE LN+S N   LE+LP SIGLL  L  L+VS NK+T LPDSI   R L +
Sbjct: 243 PDSIAGLQNLEELNLSSNL--LESLPDSIGLLQKLKLLNVSGNKLTALPDSICQCRSLVE 300

Query: 180 LSLEGNPLVSPPMDV 194
           L +  N L   P ++
Sbjct: 301 LDVSFNNLSYLPTNI 315


>gi|22330985|ref|NP_187741.2| ras group-related LRR 9 protein [Arabidopsis thaliana]
 gi|18175638|gb|AAL59901.1| unknown protein [Arabidopsis thaliana]
 gi|21689861|gb|AAM67491.1| unknown protein [Arabidopsis thaliana]
 gi|57868160|gb|AAW57418.1| plant intracellular Ras-group-related LRR protein 9 [Arabidopsis
           thaliana]
 gi|332641510|gb|AEE75031.1| ras group-related LRR 9 protein [Arabidopsis thaliana]
          Length = 499

 Score =  182 bits (461), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/208 (50%), Positives = 141/208 (67%), Gaps = 1/208 (0%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+S+ A L ++V LDV +N L+ LP+SIG LSKLK+L+VS N L SLP +I  C SL  
Sbjct: 236 IPDSI-AGLHSLVELDVSTNSLETLPDSIGLLSKLKILNVSTNKLTSLPDSICRCGSLVI 294

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ +FN+L  LP  IG EL+NL+ L +  NKI   P S+  + SL+ LDA  N L  LP+
Sbjct: 295 LDVSFNRLTYLPTNIGPELVNLEKLLVQYNKIRSFPTSIGEMRSLKHLDAHFNELNGLPD 354

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
               L NLE LN+S NF  L+ LP+S G L+SL ELD+S N+I  LPD+ G L  L KL+
Sbjct: 355 SFVLLTNLEYLNLSSNFSDLKDLPFSFGELISLQELDLSNNQIHALPDTFGTLDSLTKLN 414

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEK 209
           ++ NPLV PP +VV++G+ AVK Y+ ++
Sbjct: 415 VDQNPLVVPPEEVVKEGVEAVKTYMGQR 442


>gi|12321872|gb|AAG50968.1|AC073395_10 hypothetical protein; 91861-89496 [Arabidopsis thaliana]
          Length = 537

 Score =  182 bits (461), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/208 (50%), Positives = 141/208 (67%), Gaps = 1/208 (0%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+S+ A L ++V LDV +N L+ LP+SIG LSKLK+L+VS N L SLP +I  C SL  
Sbjct: 274 IPDSI-AGLHSLVELDVSTNSLETLPDSIGLLSKLKILNVSTNKLTSLPDSICRCGSLVI 332

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ +FN+L  LP  IG EL+NL+ L +  NKI   P S+  + SL+ LDA  N L  LP+
Sbjct: 333 LDVSFNRLTYLPTNIGPELVNLEKLLVQYNKIRSFPTSIGEMRSLKHLDAHFNELNGLPD 392

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
               L NLE LN+S NF  L+ LP+S G L+SL ELD+S N+I  LPD+ G L  L KL+
Sbjct: 393 SFVLLTNLEYLNLSSNFSDLKDLPFSFGELISLQELDLSNNQIHALPDTFGTLDSLTKLN 452

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEK 209
           ++ NPLV PP +VV++G+ AVK Y+ ++
Sbjct: 453 VDQNPLVVPPEEVVKEGVEAVKTYMGQR 480



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/173 (33%), Positives = 89/173 (51%), Gaps = 17/173 (9%)

Query: 39  LDVSGNLLESLPKTIENCRSLEELNANFNKLRQ-----LPDTIGFELINLKTLSINCNKI 93
           +D+SG  L  LP+     + L  LN + NKL +     +   I F L+      ++ +  
Sbjct: 203 VDLSGRKLRLLPEAFGRIQGLLVLNLSNNKLERSYMLNIRCGISFWLLPAIAADVHASSF 262

Query: 94  V---------ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
           +          +P S+  L SL  LD   N L++LP+ +  L  L++LN+S N   L +L
Sbjct: 263 LDSSEVYVQQSIPDSIAGLHSLVELDVSTNSLETLPDSIGLLSKLKILNVSTN--KLTSL 320

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGC-LRKLQKLSLEGNPLVSPPMDVVE 196
           P SI    SLV LDVS+N++T LP +IG  L  L+KL ++ N + S P  + E
Sbjct: 321 PDSICRCGSLVILDVSFNRLTYLPTNIGPELVNLEKLLVQYNKIRSFPTSIGE 373



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/57 (50%), Positives = 37/57 (64%)

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQG 198
           +++P SI  L SLVELDVS N + TLPDSIG L KL+ L++  N L S P  +   G
Sbjct: 272 QSIPDSIAGLHSLVELDVSTNSLETLPDSIGLLSKLKILNVSTNKLTSLPDSICRCG 328


>gi|242073460|ref|XP_002446666.1| hypothetical protein SORBIDRAFT_06g020060 [Sorghum bicolor]
 gi|241937849|gb|EES10994.1| hypothetical protein SORBIDRAFT_06g020060 [Sorghum bicolor]
          Length = 511

 Score =  180 bits (457), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 113/284 (39%), Positives = 160/284 (56%), Gaps = 43/284 (15%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKC-----------------------LPNSIGCLSKLKV 38
           +PE+   R+L + VLDV  NQL+                        LP++IG LSKLK+
Sbjct: 221 LPEAF-GRILGLRVLDVSRNQLEVIPDAIGGLDHLEELRLAANSLVSLPDTIGLLSKLKI 279

Query: 39  LDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ 98
           L+VS N L +LP +I  CRSL EL+ ++N L  LP  IG+EL+NL+ L I+ NK+  LP 
Sbjct: 280 LNVSSNRLRALPDSISKCRSLVELDVSYNGLTYLPTNIGYELVNLRKLWIHMNKLRSLPS 339

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
           S+  +TSL +LDA  N L  LP     L +LE+LN+S NF  L+ LP S G L++L ELD
Sbjct: 340 SVCEMTSLYLLDAHFNELCGLPSAFGKLSSLEILNLSSNFSDLKELPSSFGDLLNLRELD 399

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKM-------- 210
           +S N+I  LPD+ G L KL+KL+LE NPL  PP  +V  G+ AVK Y+S++         
Sbjct: 400 LSNNQIHALPDTFGRLDKLEKLNLEQNPLAMPPEAIVNNGVDAVKEYMSKRWLDILLEEE 459

Query: 211 ------NNDHKSPKKKSWVGKLVKY-----GTFNGALRNHRSEE 243
                      S   K+W+ + V +     G+  G L  ++S++
Sbjct: 460 QRRIAAETPQASSTPKAWLDRSVSWVTGVSGSLVGYLGGNKSDK 503



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 83/147 (56%), Gaps = 4/147 (2%)

Query: 51  KTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD 110
           K  E+ + +E +     +LRQLP+  G  ++ L+ L ++ N++ ++P ++  L  L  L 
Sbjct: 200 KQAEDGKPVESVRLVDRQLRQLPEAFG-RILGLRVLDVSRNQLEVIPDAIGGLDHLEELR 258

Query: 111 ARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDS 170
              N L SLP+ +  L  L++LN+S N   L  LP SI    SLVELDVSYN +T LP +
Sbjct: 259 LAANSLVSLPDTIGLLSKLKILNVSSN--RLRALPDSISKCRSLVELDVSYNGLTYLPTN 316

Query: 171 IGC-LRKLQKLSLEGNPLVSPPMDVVE 196
           IG  L  L+KL +  N L S P  V E
Sbjct: 317 IGYELVNLRKLWIHMNKLRSLPSSVCE 343


>gi|356497728|ref|XP_003517711.1| PREDICTED: leucine-rich repeat-containing protein 7-like [Glycine
           max]
          Length = 461

 Score =  180 bits (456), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 102/208 (49%), Positives = 141/208 (67%), Gaps = 1/208 (0%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP+S+ A L  +V LDV SN L+ LP+SIG L  LK+ +VS N L +LP++I  CRSL 
Sbjct: 192 VIPDSI-AGLQRLVELDVSSNVLESLPDSIGLLVNLKIFNVSANKLTALPESIALCRSLV 250

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+A+FN L  LP  +GF L+NL+ L I+ NKI  LP S+  + SLR LD   N L  LP
Sbjct: 251 ELDASFNNLMCLPTNMGFGLVNLEKLLIHLNKIRFLPASIGEMKSLRHLDVHFNELHGLP 310

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           + +  L NLE LN+S NF  +  LP ++G L++L ELD+S N+I  LP S G L KL KL
Sbjct: 311 QSIGKLTNLEYLNVSSNFSDMTELPETLGDLVNLRELDLSNNQIRALPYSFGRLEKLTKL 370

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSE 208
           +L+ NP++ PP++VV QG  AVK ++++
Sbjct: 371 NLDQNPIIVPPIEVVNQGAEAVKEFMAK 398



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 66/112 (58%), Gaps = 2/112 (1%)

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           ++ + ++ + + ILP++   +  L VL+   N L+ +P+ +  L  L  L++S N   LE
Sbjct: 157 VERVDLSGSHLRILPEAFGKIRGLVVLNLSQNQLEVIPDSIAGLQRLVELDVSSNV--LE 214

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +LP SIGLL++L   +VS NK+T LP+SI   R L +L    N L+  P ++
Sbjct: 215 SLPDSIGLLVNLKIFNVSANKLTALPESIALCRSLVELDASFNNLMCLPTNM 266


>gi|224133674|ref|XP_002321633.1| predicted protein [Populus trichocarpa]
 gi|222868629|gb|EEF05760.1| predicted protein [Populus trichocarpa]
          Length = 515

 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/209 (49%), Positives = 143/209 (68%), Gaps = 1/209 (0%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP+S+T  L  +  L++ SN L+ LP+SIG L  LK+LDVS N +E LP TI +CRSL 
Sbjct: 247 VIPDSITG-LEILEELNLASNLLEALPDSIGLLQNLKILDVSSNKIEVLPGTICHCRSLL 305

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN L  LP  IG E+ NL+ LSI  NKI  LP S+  + SLR LDA  N L+ LP
Sbjct: 306 ELDVSFNCLTYLPTNIGHEMSNLQRLSIQLNKIFSLPTSIGEMRSLRHLDAHFNELRGLP 365

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             +  L NLE+LN+S NF  L+ LP + G L +L ELD+S N+I+ LPDS G L  L KL
Sbjct: 366 LAIGKLTNLEILNLSGNFSDLKELPETFGDLTNLKELDLSNNQISALPDSFGRLDNLTKL 425

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEK 209
           +L+ NPLV PP +V+++G+ AVK +++++
Sbjct: 426 NLDQNPLVIPPPEVIKEGVEAVKIFMAKR 454



 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 63/113 (55%), Gaps = 2/113 (1%)

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
            ++ + ++  ++  LP+    +  L+VL+   N L+ +P+ +  L  LE LN++ N   L
Sbjct: 211 GIERVDLSNRRLRFLPEGFGRVVGLKVLNLSNNQLQVIPDSITGLEILEELNLASNL--L 268

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           E LP SIGLL +L  LDVS NKI  LP +I   R L +L +  N L   P ++
Sbjct: 269 EALPDSIGLLQNLKILDVSSNKIEVLPGTICHCRSLLELDVSFNCLTYLPTNI 321


>gi|297833920|ref|XP_002884842.1| hypothetical protein ARALYDRAFT_317922 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297330682|gb|EFH61101.1| hypothetical protein ARALYDRAFT_317922 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 537

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/208 (49%), Positives = 139/208 (66%), Gaps = 1/208 (0%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+S+ A L ++V LDV +N L+ LP+SIG LSKLK+L+VS N L  LP +I  C SL  
Sbjct: 274 IPDSI-AGLHSLVELDVSTNSLETLPDSIGLLSKLKILNVSTNKLTCLPDSICRCGSLVI 332

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ +FN+L  LP  IG EL+NL+ L +  NKI   P S+  + SL+ LDA  N L  LP+
Sbjct: 333 LDVSFNRLTYLPTNIGLELVNLEKLLVQYNKIRSFPTSIGEMRSLKHLDAHFNELYGLPD 392

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
               L NLE LN+S NF  L+ LP S G L+SL ELD+S N+I  LPD+ G L  L KL+
Sbjct: 393 SFVLLTNLEYLNLSSNFSDLKDLPSSFGDLISLQELDLSNNQIHALPDTFGTLDSLTKLN 452

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEK 209
           ++ NPLV PP +VV++G+ AVK Y+ ++
Sbjct: 453 VDQNPLVVPPEEVVKEGVEAVKTYMGQR 480



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 35/57 (61%)

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQG 198
           + +P SI  L SLVELDVS N + TLPDSIG L KL+ L++  N L   P  +   G
Sbjct: 272 QAIPDSIAGLHSLVELDVSTNSLETLPDSIGLLSKLKILNVSTNKLTCLPDSICRCG 328


>gi|357142738|ref|XP_003572676.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Brachypodium distachyon]
          Length = 495

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 97/195 (49%), Positives = 131/195 (67%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L + SN L  LP++IG LS LK+LDVSGN L SLP +I  CRSL EL+A++N L  LP  
Sbjct: 247 LRLASNALVSLPDTIGLLSNLKILDVSGNKLRSLPDSISKCRSLVELDASYNVLAYLPTG 306

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG EL+NL+ L ++ NK+  LP S+  + SLR+LDA  N L+ LP  +  L  LE LN+S
Sbjct: 307 IGHELVNLQKLWVHLNKLRSLPSSVCEMRSLRLLDAHFNELRGLPAAIGKLAALESLNLS 366

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            NF  +  LP S   L+ L ELD+S N+I  LPD  G L +L+ LSL+ NPL  PPM+VV
Sbjct: 367 SNFSDMRDLPESFCDLVGLRELDLSNNQIHELPDRFGQLDRLELLSLDQNPLAVPPMEVV 426

Query: 196 EQGLSAVKGYLSEKM 210
            +G+ AVK Y+++++
Sbjct: 427 AEGVGAVKEYMTKRL 441



 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 33/53 (62%)

Query: 139 QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           + L  LP   G +  L+ L+VS N++ T+PD+IG L  L++L L  N LVS P
Sbjct: 206 RQLHHLPEPFGRIRGLLVLNVSRNQLQTVPDAIGGLEHLEELRLASNALVSLP 258


>gi|223949627|gb|ACN28897.1| unknown [Zea mays]
          Length = 502

 Score =  178 bits (451), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 105/231 (45%), Positives = 143/231 (61%), Gaps = 24/231 (10%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKC-----------------------LPNSIGCLSKLKV 38
           +PE+   R+L + VLDV  NQL+                        LP++IG LS LK+
Sbjct: 212 LPEAF-GRILGLRVLDVSRNQLEVIPDAIGGLGHLEELFLTANDLVSLPDTIGLLSNLKI 270

Query: 39  LDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ 98
           L+VS N L +LP +I  CRSL ELN ++N L  LP  IG++L+NL+ L I+ NK+  LP 
Sbjct: 271 LNVSSNRLRALPDSISKCRSLVELNVSYNGLTYLPTNIGYDLVNLRKLWIHMNKLRSLPS 330

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
           S+  + SL +LDA  N L  LP     L  LE+LN+S NF  L+ LP S G L++L ELD
Sbjct: 331 SVCEMRSLYLLDAHFNELCGLPSLFGKLSGLEILNLSSNFSDLKELPPSFGDLLNLRELD 390

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEK 209
           +S N+I  LPD+ G L KL+KL+LE NPLV PP D+V +G+ AVK Y+S++
Sbjct: 391 LSNNQIHALPDTFGRLDKLEKLNLEQNPLVMPPEDIVNKGVDAVKEYMSKR 441



 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 33/53 (62%)

Query: 139 QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           + L  LP + G ++ L  LDVS N++  +PD+IG L  L++L L  N LVS P
Sbjct: 207 RQLRHLPEAFGRILGLRVLDVSRNQLEVIPDAIGGLGHLEELFLTANDLVSLP 259


>gi|226502182|ref|NP_001149497.1| LOC100283123 [Zea mays]
 gi|195627564|gb|ACG35612.1| protein lap1 [Zea mays]
          Length = 502

 Score =  177 bits (450), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 105/231 (45%), Positives = 143/231 (61%), Gaps = 24/231 (10%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKC-----------------------LPNSIGCLSKLKV 38
           +PE+   R+L + VLDV  NQL+                        LP++IG LS LK+
Sbjct: 212 LPEAF-GRILGLRVLDVSRNQLEVIPDAIGGLGHLEELFLTANDLVSLPDTIGLLSNLKI 270

Query: 39  LDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ 98
           L+VS N L +LP +I  CRSL ELN ++N L  LP  IG++L+NL+ L I+ NK+  LP 
Sbjct: 271 LNVSSNRLRALPDSISKCRSLVELNVSYNGLTYLPTNIGYDLVNLRKLWIHMNKLRSLPS 330

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
           S+  + SL +LDA  N L  LP     L  LE+LN+S NF  L+ LP S G L++L ELD
Sbjct: 331 SVCEMRSLYLLDAHFNELCGLPSLFGKLSGLEILNLSSNFSDLKELPPSFGDLLNLRELD 390

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEK 209
           +S N+I  LPD+ G L KL+KL+LE NPLV PP D+V +G+ AVK Y+S++
Sbjct: 391 LSNNQIHALPDTFGRLDKLEKLNLEQNPLVMPPEDIVNKGVDAVKEYMSKR 441



 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 33/53 (62%)

Query: 139 QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           + L  LP + G ++ L  LDVS N++  +PD+IG L  L++L L  N LVS P
Sbjct: 207 RQLRHLPEAFGRILGLRVLDVSRNQLEVIPDAIGGLGHLEELFLTANDLVSLP 259


>gi|413918659|gb|AFW58591.1| protein lap1 [Zea mays]
          Length = 753

 Score =  177 bits (450), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/284 (40%), Positives = 159/284 (55%), Gaps = 43/284 (15%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKC-----------------------LPNSIGCLSKLKV 38
           +PE+   R+L + VLDV  NQL+                        LP++IG LS LK+
Sbjct: 463 LPEAF-GRILGLRVLDVSRNQLEVIPDAIGGLGHLEELFLTANDLVSLPDTIGLLSNLKI 521

Query: 39  LDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ 98
           L+VS N L +LP +I  CRSL ELN ++N L  LP  IG++L+NL+ L I+ NK+  LP 
Sbjct: 522 LNVSSNRLRALPDSISKCRSLVELNVSYNGLTYLPTNIGYDLVNLRKLWIHMNKLRSLPS 581

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
           S+  + SL +LDA  N L  LP     L  LE+LN+S NF  L+ LP S G L++L ELD
Sbjct: 582 SVCEMRSLYLLDAHFNELCGLPSLFGKLSGLEILNLSSNFSDLKELPPSFGDLLNLRELD 641

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKM-------- 210
           +S N+I  LPD+ G L KL+KL+LE NPLV PP D+V +G+ AVK Y+S++         
Sbjct: 642 LSNNQIHALPDTFGRLDKLEKLNLEQNPLVMPPEDIVNKGVDAVKEYMSKRWLDILLEEE 701

Query: 211 ------NNDHKSPKKKSWVGKLVKYGT-----FNGALRNHRSEE 243
                      S   K+W+ + V + T       G L  ++SE+
Sbjct: 702 QRRIAAETPEMSSTPKAWLTRSVSWVTDVSESLAGYLGGNKSEK 745



 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L  LP + G ++ L  LDVS N++  +PD+IG L  L++L L  N LVS P
Sbjct: 460 LRHLPEAFGRILGLRVLDVSRNQLEVIPDAIGGLGHLEELFLTANDLVSLP 510


>gi|302762216|ref|XP_002964530.1| hypothetical protein SELMODRAFT_142486 [Selaginella moellendorffii]
 gi|300168259|gb|EFJ34863.1| hypothetical protein SELMODRAFT_142486 [Selaginella moellendorffii]
          Length = 299

 Score =  177 bits (448), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 104/221 (47%), Positives = 139/221 (62%), Gaps = 4/221 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+S+   L  + VLD+ SNQL  LP++IG L+ LK L++  N +E LP TI NC SLEE
Sbjct: 49  LPDSI-GELSQLTVLDLQSNQLTALPDTIGRLTSLKQLNIEKNGIEELPWTIGNCESLEE 107

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L A+FN+L+ LP+ +G+ L NL+ LS++ N +  LP ++ +LTSL  LD   N L+S+PE
Sbjct: 108 LRADFNQLKALPEAVGY-LGNLRILSVHLNCLKSLPSTMAYLTSLAELDVHFNQLESVPE 166

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L  +  L  L+IS NF  L  LPY IG L  L ELD+SYN I  LPDS   L  L+KL 
Sbjct: 167 SLCFVTTLRKLDISSNFHALRFLPYKIGNLHQLEELDISYNSILELPDSFVQLENLRKLR 226

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSE--KMNNDHKSPKKK 220
           LEGNP   PP+ V ++G  A+  YL E  K     K  +KK
Sbjct: 227 LEGNPWRVPPLQVTQKGNQAIFDYLHESIKQKQQEKLARKK 267


>gi|116309899|emb|CAH66934.1| OSIGBa0116M22.1 [Oryza sativa Indica Group]
 gi|116310302|emb|CAH67320.1| OSIGBa0106G07.16 [Oryza sativa Indica Group]
          Length = 509

 Score =  176 bits (447), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 108/272 (39%), Positives = 163/272 (59%), Gaps = 21/272 (7%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP+++   L ++  L + SN L  LP+SIG L  L++L+V  N L SLP +I  CRSL 
Sbjct: 239 VIPDAIGG-LDHLEELRLASNALISLPDSIGLLLNLRILNVGSNRLRSLPDSISKCRSLI 297

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+A++N L  LP  IG+EL+NL+ L ++ NK+  LP S+  + SL +LDA  N L  LP
Sbjct: 298 ELDASYNGLAYLPTNIGYELVNLRKLWVHMNKLRSLPSSICEMRSLYLLDAHFNELCGLP 357

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             +  L +LE+LN+S NF  L+ LP S G L++L ELD+S N+I  LPDS G L KL+KL
Sbjct: 358 SAIGKLSSLEILNLSSNFSDLKDLPASFGDLLNLRELDLSNNQIHALPDSFGRLDKLEKL 417

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEK-----MNNDHK------SPKK----KSWVGK 225
           +LE NPL  PPM++V +G+ AVK Y+ ++     +  + K      SP+      +W+ +
Sbjct: 418 NLEQNPLSMPPMEIVSKGVDAVKEYMLQRWLDILLEEERKSIAAAESPQAPTTPSAWLAR 477

Query: 226 LVKY-----GTFNGALRNHRSEERERFIMSDF 252
            V +     G+  G L      E++ ++   +
Sbjct: 478 SVSWVSDVSGSLVGYLSGENKTEKDAYLDQQY 509



 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%)

Query: 139 QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           + L  LP + G +  L  LDVS N++  +PD+IG L  L++L L  N L+S P
Sbjct: 212 RQLRHLPEAFGRIQGLRVLDVSRNQLEVIPDAIGGLDHLEELRLASNALISLP 264


>gi|326533850|dbj|BAJ93698.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 383

 Score =  176 bits (447), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 106/271 (39%), Positives = 165/271 (60%), Gaps = 23/271 (8%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP+++   L ++  L + SN L  LP+++G LS LK+L+VS N L +LP +I  CRSL 
Sbjct: 110 VIPDAIGG-LEHLEELRLASNALVSLPDTVGFLSNLKILNVSTNKLRTLPDSISKCRSLV 168

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+A++N L  LP  IG+ELINL+ L ++ NK+   P S+  + SL +LDA  N L  LP
Sbjct: 169 ELDASYNGLTYLPTNIGYELINLRKLWVHMNKLRSFPSSICEMQSLYLLDAHFNELCGLP 228

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             +  L +LE+LN+S NF  ++ LP+S G L++L E+D+S N+I  LPDS G L KL+KL
Sbjct: 229 SAIGKLSSLEILNLSSNFSDMKELPFSFGDLLNLREVDLSNNQIHALPDSFGRLDKLEKL 288

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEK-----MNNDHKS------------PKKKSWV 223
           +LE NPL  P  +VV++G+ AVK Y+S++     +  + +S               K+W+
Sbjct: 289 NLEQNPLSMPSAEVVKEGVEAVKEYMSKRWLDALLEEEQRSMAEAAAAESLQASTPKAWL 348

Query: 224 GKLVKY-----GTFNGALRNHRSEERERFIM 249
            + V +     G+F G +   +S+  +  I+
Sbjct: 349 ARSVSWVSDVGGSFVGYVSGGQSKSEKDSIL 379



 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 3/64 (4%)

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
           VL + +  +YL   P + G ++ L  LDVS+N++  +PD+IG L  L++L L  N LVS 
Sbjct: 78  VLLVDRQLRYL---PEAFGRILGLRVLDVSHNQLQVIPDAIGGLEHLEELRLASNALVSL 134

Query: 191 PMDV 194
           P  V
Sbjct: 135 PDTV 138


>gi|326516954|dbj|BAJ96469.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 504

 Score =  176 bits (447), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 106/271 (39%), Positives = 165/271 (60%), Gaps = 23/271 (8%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP+++   L ++  L + SN L  LP+++G LS LK+L+VS N L +LP +I  CRSL 
Sbjct: 231 VIPDAIGG-LEHLEELRLASNALVSLPDTVGFLSNLKILNVSTNKLRTLPDSISKCRSLV 289

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+A++N L  LP  IG+ELINL+ L ++ NK+   P S+  + SL +LDA  N L  LP
Sbjct: 290 ELDASYNGLTYLPTNIGYELINLRKLWVHMNKLRSFPSSICEMQSLYLLDAHFNELCGLP 349

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             +  L +LE+LN+S NF  ++ LP+S G L++L E+D+S N+I  LPDS G L KL+KL
Sbjct: 350 SAIGKLSSLEILNLSSNFSDMKELPFSFGDLLNLREVDLSNNQIHALPDSFGRLDKLEKL 409

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEK-----MNNDHKS------------PKKKSWV 223
           +LE NPL  P  +VV++G+ AVK Y+S++     +  + +S               K+W+
Sbjct: 410 NLEQNPLSMPSAEVVKEGVEAVKEYMSKRWLDALLEEEQRSMAEAAAAESLQASTPKAWL 469

Query: 224 GKLVKY-----GTFNGALRNHRSEERERFIM 249
            + V +     G+F G +   +S+  +  I+
Sbjct: 470 ARSVSWVSDVGGSFVGYVSGGQSKSEKDSIL 500



 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 3/64 (4%)

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
           VL + +  +YL   P + G ++ L  LDVS+N++  +PD+IG L  L++L L  N LVS 
Sbjct: 199 VLLVDRQLRYL---PEAFGRILGLRVLDVSHNQLQVIPDAIGGLEHLEELRLASNALVSL 255

Query: 191 PMDV 194
           P  V
Sbjct: 256 PDTV 259


>gi|449434977|ref|XP_004135272.1| PREDICTED: protein scribble homolog [Cucumis sativus]
 gi|449478610|ref|XP_004155368.1| PREDICTED: protein scribble homolog [Cucumis sativus]
          Length = 501

 Score =  176 bits (446), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 105/234 (44%), Positives = 149/234 (63%), Gaps = 12/234 (5%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+S+ A L  +  LD+ SN L+ LP+SIG L  LKV+ VSGN L+ LP+TI  C SL 
Sbjct: 231 VLPDSI-AGLQKLQRLDISSNLLESLPDSIGVLINLKVVIVSGNKLKVLPETITGCSSLV 289

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+A+FN L+ LP  IG+ L+NL+ LSI  NKI   P S+  L SL+  DA  N L +LP
Sbjct: 290 ELDASFNNLQGLPINIGYGLVNLERLSIQLNKICYFPTSICQLRSLKYFDAHFNQLHALP 349

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             +  L +LEVLN+S NF  L  +P S+  L +L ELD+S N+I  LPD  G L KL +L
Sbjct: 350 PAIGRLTSLEVLNLSGNFNNLTEVPESMSDLCNLKELDLSDNQIKALPDRFGRLEKLLRL 409

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYL--------SEKMNNDHK---SPKKKSWV 223
           +++ NPLV PPM++V++G  AVK ++        +EK  + H+   + K+  W+
Sbjct: 410 NMDQNPLVIPPMEIVDKGAQAVKDFMDMRWADLVAEKQKSMHEANMAEKQSGWL 463



 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 34/53 (64%)

Query: 139 QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           Q +  LP   G L  L++L++S+N++  LPDSI  L+KLQ+L +  N L S P
Sbjct: 204 QQIRFLPEEFGKLRRLIDLNLSHNQLEVLPDSIAGLQKLQRLDISSNLLESLP 256


>gi|225456898|ref|XP_002280677.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Vitis vinifera]
          Length = 517

 Score =  176 bits (445), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/183 (53%), Positives = 126/183 (68%)

Query: 27  PNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTL 86
           P+SIG L  LK+LD SGN L +LP +I +CRSL EL+ +FN L  LP  IG+EL+NLK L
Sbjct: 275 PDSIGLLVNLKILDASGNKLLALPDSICHCRSLVELDVSFNNLAYLPTNIGYELVNLKRL 334

Query: 87  SINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPY 146
           SIN NKI  LP S+  + SL  LDA  N L+ LP  +  L NLE LN+S NF  L  LP 
Sbjct: 335 SINLNKIRSLPTSIGEMRSLCHLDAHFNELRGLPSAIGRLTNLETLNLSSNFSDLTELPE 394

Query: 147 SIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYL 206
           +IG L +L ELD+S N+I  LPD+ G L  L KL+L+ NPLV PPM+VV +G+ AVK ++
Sbjct: 395 TIGDLTNLRELDLSNNQIQALPDTFGRLDNLNKLNLDQNPLVIPPMEVVNEGVEAVKVFM 454

Query: 207 SEK 209
           +++
Sbjct: 455 AKR 457



 Score = 44.3 bits (103), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 31/168 (18%)

Query: 53  IENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDAR 112
           +E+    EE N     + Q     G E ++L     +  ++  LP++   + SL  L+  
Sbjct: 190 VEHLPVKEETNEEVVGVLQEASGKGLERVDL-----SGRRLRFLPEAFGKIRSLVALNLS 244

Query: 113 LNCLKSLPEDLEN-----------------------LINLEVLNISQNFQYLETLPYSIG 149
            N L+ +P+ +                         L+NL++L+ S N   L  LP SI 
Sbjct: 245 CNQLEFIPDSIATLENLEELNLSSNLLELLPDSIGLLVNLKILDASGN--KLLALPDSIC 302

Query: 150 LLMSLVELDVSYNKITTLPDSIGC-LRKLQKLSLEGNPLVSPPMDVVE 196
              SLVELDVS+N +  LP +IG  L  L++LS+  N + S P  + E
Sbjct: 303 HCRSLVELDVSFNNLAYLPTNIGYELVNLKRLSINLNKIRSLPTSIGE 350


>gi|297733709|emb|CBI14956.3| unnamed protein product [Vitis vinifera]
          Length = 417

 Score =  175 bits (444), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 97/183 (53%), Positives = 126/183 (68%)

Query: 27  PNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTL 86
           P+SIG L  LK+LD SGN L +LP +I +CRSL EL+ +FN L  LP  IG+EL+NLK L
Sbjct: 175 PDSIGLLVNLKILDASGNKLLALPDSICHCRSLVELDVSFNNLAYLPTNIGYELVNLKRL 234

Query: 87  SINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPY 146
           SIN NKI  LP S+  + SL  LDA  N L+ LP  +  L NLE LN+S NF  L  LP 
Sbjct: 235 SINLNKIRSLPTSIGEMRSLCHLDAHFNELRGLPSAIGRLTNLETLNLSSNFSDLTELPE 294

Query: 147 SIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYL 206
           +IG L +L ELD+S N+I  LPD+ G L  L KL+L+ NPLV PPM+VV +G+ AVK ++
Sbjct: 295 TIGDLTNLRELDLSNNQIQALPDTFGRLDNLNKLNLDQNPLVIPPMEVVNEGVEAVKVFM 354

Query: 207 SEK 209
           +++
Sbjct: 355 AKR 357



 Score = 44.3 bits (103), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 26/138 (18%)

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN----------------- 125
           L+ + ++  ++  LP++   + SL  L+   N L+ +P+ +                   
Sbjct: 115 LERVDLSGRRLRFLPEAFGKIRSLVALNLSCNQLEFIPDSIATLENLEELNLSSNLLELL 174

Query: 126 ------LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGC-LRKLQ 178
                 L+NL++L+ S N   L  LP SI    SLVELDVS+N +  LP +IG  L  L+
Sbjct: 175 PDSIGLLVNLKILDASGN--KLLALPDSICHCRSLVELDVSFNNLAYLPTNIGYELVNLK 232

Query: 179 KLSLEGNPLVSPPMDVVE 196
           +LS+  N + S P  + E
Sbjct: 233 RLSINLNKIRSLPTSIGE 250


>gi|125548711|gb|EAY94533.1| hypothetical protein OsI_16309 [Oryza sativa Indica Group]
          Length = 517

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/264 (40%), Positives = 158/264 (59%), Gaps = 20/264 (7%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RL ++  L + SN L  LP+SIG L  L++L+V  N L SLP +I  CRSL EL+A++N 
Sbjct: 254 RLDHLEELRLASNALISLPDSIGLLLNLRILNVGSNRLRSLPDSISKCRSLIELDASYNG 313

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG+EL+NL+ L ++ NK+  LP S+  + SL +LDA  N L  LP  +  L +
Sbjct: 314 LAYLPTNIGYELVNLRKLWVHMNKLRSLPSSICEMRSLYLLDAHFNELCGLPSAIGKLSS 373

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           LE+LN+S NF  L+ LP S G L++L ELD+S N+I  LPD+ G L KL+KL+LE NPL 
Sbjct: 374 LEILNLSSNFSDLKDLPASFGDLLNLRELDLSNNQIHALPDNFGRLDKLEKLNLEQNPLS 433

Query: 189 SPPMDVVEQGLSAVKGYLSEK-----MNNDHK------SPKK----KSWVGKLVKY---- 229
            PPM++V +G+ AVK Y+ ++     +  + K      SP+      +W+ + V +    
Sbjct: 434 MPPMEIVNKGVDAVKEYMLQRWLDILLEEERKSIAAAESPQAPTTPSAWLARSVSWVSDV 493

Query: 230 -GTFNGALRNHRSEERERFIMSDF 252
            G+  G L      E++ ++   +
Sbjct: 494 SGSLVGYLSGENKTEKDAYLDQQY 517



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 3/126 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P ++   L+N+  L VH N+L+ LP+SI  +  L +LD   N L  LP  I    SLE 
Sbjct: 317 LPTNIGYELVNLRKLWVHMNKLRSLPSSICEMRSLYLLDAHFNELCGLPSAIGKLSSLEI 376

Query: 62  LN--ANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
           LN  +NF+ L+ LP + G +L+NL+ L ++ N+I  LP +   L  L  L+   N L   
Sbjct: 377 LNLSSNFSDLKDLPASFG-DLLNLRELDLSNNQIHALPDNFGRLDKLEKLNLEQNPLSMP 435

Query: 120 PEDLEN 125
           P ++ N
Sbjct: 436 PMEIVN 441


>gi|38605760|emb|CAE05859.2| OSJNBa0044K18.1 [Oryza sativa Japonica Group]
          Length = 434

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/272 (39%), Positives = 163/272 (59%), Gaps = 21/272 (7%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP+++   L ++  L + SN L  LP+SIG L  L++L+V  N L SLP +I  CRSL 
Sbjct: 164 VIPDAIGG-LDHLEELRLASNALISLPDSIGLLLNLRILNVGSNRLRSLPDSISKCRSLI 222

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+A++N L  LP  IG+EL+NL+ L ++ NK+  LP S+  + SL +LDA  N L  LP
Sbjct: 223 ELDASYNGLAYLPTNIGYELVNLRKLWVHMNKLRSLPSSICEMRSLYLLDAHFNELCGLP 282

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             +  L +LE+LN+S NF  L+ LP S G L++L ELD+S N+I  LPD+ G L KL+KL
Sbjct: 283 SAIGKLSSLEILNLSSNFSDLKDLPASFGDLLNLRELDLSNNQIHALPDNFGRLDKLEKL 342

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEK-----MNNDHK------SPKK----KSWVGK 225
           +LE NPL  PPM++V +G+ AVK Y+ ++     +  + K      SP+      +W+ +
Sbjct: 343 NLEQNPLSMPPMEIVNKGVDAVKEYMLQRWLDILLEEERKSIAAAESPQAPTTPSAWLAR 402

Query: 226 LVKY-----GTFNGALRNHRSEERERFIMSDF 252
            V +     G+  G L      E++ ++   +
Sbjct: 403 SVSWVSDVSGSLVGYLSGENKTEKDAYLDQQY 434



 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%)

Query: 139 QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           + L  LP + G +  L  LDVS N++  +PD+IG L  L++L L  N L+S P
Sbjct: 137 RQLRHLPEAFGRIQGLRVLDVSRNQLEVIPDAIGGLDHLEELRLASNALISLP 189


>gi|168057803|ref|XP_001780902.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667684|gb|EDQ54308.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 376

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 94/198 (47%), Positives = 129/198 (65%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L+ + VLD+  NQLK LP+SIG L+ LK LD+SGN L+ LP ++  CR+L EL ANFN+L
Sbjct: 167 LVKLEVLDLQHNQLKSLPDSIGLLTSLKSLDISGNALKVLPASLGGCRALVELIANFNQL 226

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
              P   GF+   L+TL ++ NK+   P S+  L +L  LD   N LK LP  +  L NL
Sbjct: 227 ETWPADFGFQFSKLQTLCLHLNKLTSFPPSIGELRALMFLDVHFNKLKGLPSTIGKLSNL 286

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
            VL+ S NF+    LP SIG L+SL ELD+S+N+I  LP S+G L  L+KL L+ NP+V 
Sbjct: 287 TVLDASSNFRDFADLPDSIGDLVSLTELDLSFNQIHELPISMGKLTNLRKLKLDENPIVV 346

Query: 190 PPMDVVEQGLSAVKGYLS 207
           PP +++EQG  A+  Y++
Sbjct: 347 PPEEILEQGHEAIMKYMA 364



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 2/109 (1%)

Query: 85  TLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
           TL ++   +  +P++   ++SL +L+   N L+ LP+ +  L+ LEVL++  N   L++L
Sbjct: 126 TLDLSTQFLSHVPETFGRISSLIILNLSNNRLEYLPDAVGGLVKLEVLDLQHN--QLKSL 183

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMD 193
           P SIGLL SL  LD+S N +  LP S+G  R L +L    N L + P D
Sbjct: 184 PDSIGLLTSLKSLDISGNALKVLPASLGGCRALVELIANFNQLETWPAD 232


>gi|242062170|ref|XP_002452374.1| hypothetical protein SORBIDRAFT_04g024650 [Sorghum bicolor]
 gi|241932205|gb|EES05350.1| hypothetical protein SORBIDRAFT_04g024650 [Sorghum bicolor]
          Length = 503

 Score =  174 bits (442), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 96/194 (49%), Positives = 125/194 (64%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L + SN L  LP+SIG LS LK+LDVSGN L  LP TI  CRSL EL+A++N L  LP  
Sbjct: 248 LRLASNDLVSLPDSIGLLSNLKILDVSGNRLRVLPDTISKCRSLMELDASYNALAYLPTG 307

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG EL++L+TL ++ NK+  LP S+  + SLR+LDA  N L  LP  +  L  LE L++S
Sbjct: 308 IGHELVHLQTLRVHLNKLRSLPSSVCEMRSLRLLDAHFNELHGLPAAIGQLSALETLDLS 367

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            NF  +  LP S G L  L ELD+S N+I  LPD  G L KL++L L+ NPL  PP +VV
Sbjct: 368 SNFSDMRDLPPSFGDLAGLRELDLSNNQIRALPDCFGRLGKLERLRLDQNPLAVPPPEVV 427

Query: 196 EQGLSAVKGYLSEK 209
             G+ AV  Y++ +
Sbjct: 428 ADGVVAVNEYMARR 441



 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 2/70 (2%)

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           D E    +E +N++   + L  LP  +G +  L+ LDVS N++  +PD+IG L  L++L 
Sbjct: 192 DAEEGKVVERVNLAD--RQLHLLPEPVGRIRGLLALDVSRNRLKEVPDAIGGLEHLEELR 249

Query: 182 LEGNPLVSPP 191
           L  N LVS P
Sbjct: 250 LASNDLVSLP 259


>gi|222629055|gb|EEE61187.1| hypothetical protein OsJ_15183 [Oryza sativa Japonica Group]
          Length = 438

 Score =  174 bits (441), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 107/272 (39%), Positives = 163/272 (59%), Gaps = 21/272 (7%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP+++   L ++  L + SN L  LP+SIG L  L++L+V  N L SLP +I  CRSL 
Sbjct: 168 VIPDAIGG-LDHLEELRLASNALISLPDSIGLLLNLRILNVGSNRLRSLPDSISKCRSLI 226

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+A++N L  LP  IG+EL+NL+ L ++ NK+  LP S+  + SL +LDA  N L  LP
Sbjct: 227 ELDASYNGLAYLPTNIGYELVNLRKLWVHMNKLRSLPSSICEMRSLYLLDAHFNELCGLP 286

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             +  L +LE+LN+S NF  L+ LP S G L++L ELD+S N+I  LPD+ G L KL+KL
Sbjct: 287 SAIGKLSSLEILNLSSNFSDLKDLPASFGDLLNLRELDLSNNQIHALPDNFGRLDKLEKL 346

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEK-----MNNDHK------SPKK----KSWVGK 225
           +LE NPL  PPM++V +G+ AVK Y+ ++     +  + K      SP+      +W+ +
Sbjct: 347 NLEQNPLSMPPMEIVNKGVDAVKEYMLQRWLDILLEEERKSIAAAESPQAPTTPSAWLAR 406

Query: 226 LVKY-----GTFNGALRNHRSEERERFIMSDF 252
            V +     G+  G L      E++ ++   +
Sbjct: 407 SVSWVSDVSGSLVGYLSGENKTEKDAYLDQQY 438



 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 31/51 (60%)

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L  LP + G +  L  LDVS N++  +PD+IG L  L++L L  N L+S P
Sbjct: 143 LRHLPEAFGRIQGLRVLDVSRNQLEVIPDAIGGLDHLEELRLASNALISLP 193


>gi|413937564|gb|AFW72115.1| hypothetical protein ZEAMMB73_054835 [Zea mays]
          Length = 529

 Score =  174 bits (440), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 98/209 (46%), Positives = 133/209 (63%), Gaps = 1/209 (0%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP+++   L ++  L + SN L  LP+SIG LS LK+LDVSGN L  LP TI  CRSL 
Sbjct: 256 VIPDAIGG-LEHLEELRLASNDLVSLPDSIGLLSNLKILDVSGNRLRVLPDTISKCRSLV 314

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+A++N L  LP  IG EL++L+ L ++ NK+  LP S+  + SLR+LDA  N L  LP
Sbjct: 315 ELDASYNALAYLPTGIGHELVDLQILRVHLNKLRSLPSSVCEMRSLRLLDAHFNELHGLP 374

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             +  L  LE L++S NF  +  LP S G L  L ELD+S N+I  LPD  G L KL++L
Sbjct: 375 AAIGQLSALETLDLSSNFSDMRDLPPSFGDLAGLRELDLSNNQIRALPDCFGRLAKLERL 434

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEK 209
            L+ NPL  PP +VV  G+ AV  Y++ +
Sbjct: 435 RLDQNPLAVPPPEVVADGVVAVNEYMARR 463


>gi|115458964|ref|NP_001053082.1| Os04g0476700 [Oryza sativa Japonica Group]
 gi|113564653|dbj|BAF14996.1| Os04g0476700, partial [Oryza sativa Japonica Group]
          Length = 271

 Score =  173 bits (439), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 107/272 (39%), Positives = 163/272 (59%), Gaps = 21/272 (7%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP+++   L ++  L + SN L  LP+SIG L  L++L+V  N L SLP +I  CRSL 
Sbjct: 1   VIPDAIGG-LDHLEELRLASNALISLPDSIGLLLNLRILNVGSNRLRSLPDSISKCRSLI 59

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+A++N L  LP  IG+EL+NL+ L ++ NK+  LP S+  + SL +LDA  N L  LP
Sbjct: 60  ELDASYNGLAYLPTNIGYELVNLRKLWVHMNKLRSLPSSICEMRSLYLLDAHFNELCGLP 119

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             +  L +LE+LN+S NF  L+ LP S G L++L ELD+S N+I  LPD+ G L KL+KL
Sbjct: 120 SAIGKLSSLEILNLSSNFSDLKDLPASFGDLLNLRELDLSNNQIHALPDNFGRLDKLEKL 179

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEK-----MNNDHK------SPKK----KSWVGK 225
           +LE NPL  PPM++V +G+ AVK Y+ ++     +  + K      SP+      +W+ +
Sbjct: 180 NLEQNPLSMPPMEIVNKGVDAVKEYMLQRWLDILLEEERKSIAAAESPQAPTTPSAWLAR 239

Query: 226 LVKY-----GTFNGALRNHRSEERERFIMSDF 252
            V +     G+  G L      E++ ++   +
Sbjct: 240 SVSWVSDVSGSLVGYLSGENKTEKDAYLDQQY 271


>gi|413937565|gb|AFW72116.1| hypothetical protein ZEAMMB73_054835 [Zea mays]
          Length = 507

 Score =  173 bits (439), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 98/209 (46%), Positives = 133/209 (63%), Gaps = 1/209 (0%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP+++   L ++  L + SN L  LP+SIG LS LK+LDVSGN L  LP TI  CRSL 
Sbjct: 234 VIPDAIGG-LEHLEELRLASNDLVSLPDSIGLLSNLKILDVSGNRLRVLPDTISKCRSLV 292

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+A++N L  LP  IG EL++L+ L ++ NK+  LP S+  + SLR+LDA  N L  LP
Sbjct: 293 ELDASYNALAYLPTGIGHELVDLQILRVHLNKLRSLPSSVCEMRSLRLLDAHFNELHGLP 352

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             +  L  LE L++S NF  +  LP S G L  L ELD+S N+I  LPD  G L KL++L
Sbjct: 353 AAIGQLSALETLDLSSNFSDMRDLPPSFGDLAGLRELDLSNNQIRALPDCFGRLAKLERL 412

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEK 209
            L+ NPL  PP +VV  G+ AV  Y++ +
Sbjct: 413 RLDQNPLAVPPPEVVADGVVAVNEYMARR 441



 Score = 44.7 bits (104), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 33/53 (62%)

Query: 139 QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           + +  LP  IG +  L+ LDVS N++  +PD+IG L  L++L L  N LVS P
Sbjct: 207 RQMRLLPEPIGRIRGLLALDVSRNQLKVIPDAIGGLEHLEELRLASNDLVSLP 259


>gi|302794859|ref|XP_002979193.1| hypothetical protein SELMODRAFT_110183 [Selaginella moellendorffii]
 gi|302821302|ref|XP_002992314.1| hypothetical protein SELMODRAFT_135145 [Selaginella moellendorffii]
 gi|300139857|gb|EFJ06590.1| hypothetical protein SELMODRAFT_135145 [Selaginella moellendorffii]
 gi|300152961|gb|EFJ19601.1| hypothetical protein SELMODRAFT_110183 [Selaginella moellendorffii]
          Length = 437

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/268 (45%), Positives = 167/268 (62%), Gaps = 27/268 (10%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+SL+  L N++ LDV SNQL  LP+SI  L KL+ L+VSGN L+SLP ++  C SL E
Sbjct: 167 LPDSLSQ-LSNLITLDVSSNQLTTLPDSIRSLKKLRFLNVSGNALKSLPDSLALCFSLVE 225

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LNA+FN+L +LP  IG  L NL+ LS+  NK+ +LP S+  LTSL+VL+   N L +LP 
Sbjct: 226 LNASFNQLEKLPPNIG-SLFNLEKLSLQLNKLSMLPASIGDLTSLKVLEIHFNKLVALPS 284

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + NL +LEVLN S NF  L T+P S+G L  L ELD+SYN+I  LP S G L+KL+KL 
Sbjct: 285 SIGNLKDLEVLNCSSNFNSLTTVPSSLGDLYCLRELDLSYNQIRELPLSFGRLQKLRKLK 344

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSE------KMNNDHK-----SPKKK---------S 221
           L+ NPLV PP +VV+  L AV  Y++E      K++++H      +P +          S
Sbjct: 345 LDQNPLVVPPPEVVDHSLEAVLEYMAEKWRSSMKLDDEHDRAGSNTPARVVTNGGSRVIS 404

Query: 222 WVGKLVKYGT-----FNGALRNHRSEER 244
           W+G +   GT      +  L  HRS +R
Sbjct: 405 WLGGMCAAGTEFRRPSSKVLSWHRSPDR 432



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/146 (39%), Positives = 85/146 (58%), Gaps = 3/146 (2%)

Query: 49  LPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRV 108
           LP+++   +SL  +N + N L  LPD++  +L NL TL ++ N++  LP S+  L  LR 
Sbjct: 144 LPESLGRIKSLSLINLSTNCLEALPDSLS-QLSNLITLDVSSNQLTTLPDSIRSLKKLRF 202

Query: 109 LDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           L+   N LKSLP+ L    +L  LN S  F  LE LP +IG L +L +L +  NK++ LP
Sbjct: 203 LNVSGNALKSLPDSLALCFSLVELNAS--FNQLEKLPPNIGSLFNLEKLSLQLNKLSMLP 260

Query: 169 DSIGCLRKLQKLSLEGNPLVSPPMDV 194
            SIG L  L+ L +  N LV+ P  +
Sbjct: 261 ASIGDLTSLKVLEIHFNKLVALPSSI 286



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 21/128 (16%)

Query: 88  INCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN---------- 137
           ++  ++  LP+SL  + SL +++   NCL++LP+ L  L NL  L++S N          
Sbjct: 136 LSSRRVACLPESLGRIKSLSLINLSTNCLEALPDSLSQLSNLITLDVSSNQLTTLPDSIR 195

Query: 138 -----------FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
                         L++LP S+ L  SLVEL+ S+N++  LP +IG L  L+KLSL+ N 
Sbjct: 196 SLKKLRFLNVSGNALKSLPDSLALCFSLVELNASFNQLEKLPPNIGSLFNLEKLSLQLNK 255

Query: 187 LVSPPMDV 194
           L   P  +
Sbjct: 256 LSMLPASI 263


>gi|224110878|ref|XP_002315667.1| predicted protein [Populus trichocarpa]
 gi|222864707|gb|EEF01838.1| predicted protein [Populus trichocarpa]
          Length = 447

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/209 (46%), Positives = 139/209 (66%), Gaps = 1/209 (0%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+S+ A L  +V LDV SN L  LP+SIG L  LK+L+VS N +++LP++I    SL 
Sbjct: 190 VLPDSI-AGLEKLVELDVSSNLLVFLPDSIGLLRNLKILNVSANKVKALPESIALSSSLV 248

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           E++A+FN L  LP  IG+ L+NL+ LS+  NKI +LP S+  + SLR LD   N L+ LP
Sbjct: 249 EIDASFNNLVSLPANIGYGLVNLERLSVQLNKIRLLPPSICEMKSLRFLDVHFNMLRGLP 308

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             +  L NLEVLN+S NF  LE LP  IG L++L ELD+S N+I  LPD    L  L KL
Sbjct: 309 RAIGRLTNLEVLNLSSNFSDLEELPEEIGDLINLRELDLSNNQIRALPDRFARLENLTKL 368

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEK 209
            L  NPL+ PP ++V +G+ A++ +++++
Sbjct: 369 DLNENPLLVPPKEIVNKGVQAIREFMAKR 397



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 88/147 (59%), Gaps = 4/147 (2%)

Query: 51  KTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD 110
           +  E+  ++E +N +  +LR +P++IG  L  L  L+++ N++ +LP S+  L  L  LD
Sbjct: 147 REAESGGAVERVNLSARQLRLIPESIG-RLHGLLVLNLSQNQLEVLPDSIAGLEKLVELD 205

Query: 111 ARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDS 170
              N L  LP+ +  L NL++LN+S N   ++ LP SI L  SLVE+D S+N + +LP +
Sbjct: 206 VSSNLLVFLPDSIGLLRNLKILNVSAN--KVKALPESIALSSSLVEIDASFNNLVSLPAN 263

Query: 171 IG-CLRKLQKLSLEGNPLVSPPMDVVE 196
           IG  L  L++LS++ N +   P  + E
Sbjct: 264 IGYGLVNLERLSVQLNKIRLLPPSICE 290


>gi|255578319|ref|XP_002530026.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223530442|gb|EEF32326.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 456

 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/209 (48%), Positives = 136/209 (65%), Gaps = 1/209 (0%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+S+ A L  +  LDV SN L  LP+SIG L  LKVL+VSGN L  LP++I  C SL 
Sbjct: 186 VLPDSI-AGLQKLEELDVSSNLLLSLPDSIGLLRTLKVLNVSGNKLNYLPESIALCSSLV 244

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+A+FN L  LP  IG+ L NL+ LSI  NKI ILP S+  + SLR LD   N L  LP
Sbjct: 245 ELDASFNNLVSLPTNIGYGLTNLERLSIQLNKIHILPPSICEMKSLRYLDVHFNELHGLP 304

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             +  L NLEVL++S NF  L  LP ++G L +L EL++S N+I  LPD+ G L  L  L
Sbjct: 305 YAIGRLTNLEVLDLSSNFSDLTELPETVGDLANLRELNLSNNQIRALPDTFGRLENLANL 364

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEK 209
            L+ NPLV PP ++V +G+ AV+ ++ ++
Sbjct: 365 ILDENPLVIPPKEIVNKGVQAVREFMQKR 393



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 77/135 (57%), Gaps = 4/135 (2%)

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           ++ + ++  ++ +LP++   L  L +L+   N L+ LP+ +  L  LE L++S N   L 
Sbjct: 151 VERVDLSGRQLKLLPEAFGKLHGLVLLNLSRNQLEVLPDSIAGLQKLEELDVSSNL--LL 208

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAV 202
           +LP SIGLL +L  L+VS NK+  LP+SI     L +L    N LVS P + +  GL+ +
Sbjct: 209 SLPDSIGLLRTLKVLNVSGNKLNYLPESIALCSSLVELDASFNNLVSLPTN-IGYGLTNL 267

Query: 203 KGYLSEKMNNDHKSP 217
           +  LS ++N  H  P
Sbjct: 268 E-RLSIQLNKIHILP 281


>gi|302822956|ref|XP_002993133.1| hypothetical protein SELMODRAFT_136615 [Selaginella moellendorffii]
 gi|300139024|gb|EFJ05773.1| hypothetical protein SELMODRAFT_136615 [Selaginella moellendorffii]
          Length = 245

 Score =  168 bits (426), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/204 (48%), Positives = 133/204 (65%), Gaps = 3/204 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+S+   L  + VLD+ SNQL  LP++IG L+ LK L++  N +E LP TI NC SLEE
Sbjct: 32  LPDSI-GELSQLTVLDLQSNQLTALPDTIGRLTSLKRLNIEKNGIEELPWTIGNCESLEE 90

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L A+FN+L+ LP+ +G+ L NL+ LS++ N +  LP ++ +LTSL  LD   N L+S+PE
Sbjct: 91  LRADFNQLKALPEAVGY-LGNLRILSVHLNCLKSLPSTMAYLTSLAELDVHFNQLESVPE 149

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L  +  L  L+IS NF  L  LPY IG L  L ELD+SYN I  LPDS   L  L+KL 
Sbjct: 150 SLCFVTTLRKLDISSNFHALRFLPYKIGNLHQLEELDISYNSILELPDSFVQLENLRKLR 209

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGY 205
           LEGNP   PP+ V ++G + V G+
Sbjct: 210 LEGNPWRVPPLQVTQKG-NQVCGW 232



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 2/101 (1%)

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
           ++L  S++ L++LRVL+   N +  LP+ +  L  L VL++  N   L  LP +IG L S
Sbjct: 7   ILLDDSISQLSNLRVLELSGNRIVKLPDSIGELSQLTVLDLQSN--QLTALPDTIGRLTS 64

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L  L++  N I  LP +IG    L++L  + N L + P  V
Sbjct: 65  LKRLNIEKNGIEELPWTIGNCESLEELRADFNQLKALPEAV 105


>gi|297844192|ref|XP_002889977.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297335819|gb|EFH66236.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 463

 Score =  167 bits (423), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 102/241 (42%), Positives = 146/241 (60%), Gaps = 19/241 (7%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+ SN+L  LP+SIG L  L++L+V+GN L SLP++I  CRSL EL+A+FN L  LP  
Sbjct: 212 LDLSSNRLVSLPDSIGMLLNLRILNVTGNKLTSLPESIAQCRSLVELDASFNNLTSLPAN 271

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG+ L+NL+ LSI  NKI   P S+  + SLR +DA +N +  LP  +  L +LEV+N+S
Sbjct: 272 IGYGLLNLERLSIQLNKIRFFPNSMCEMRSLRYIDAHMNEIHGLPIAIGRLTSLEVMNLS 331

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            NF  L  LP +I  L +L ELD+S N+I  LP+S   L KL+KL+L+ NPL  PP ++V
Sbjct: 332 SNFSDLTELPDTISDLANLRELDLSNNQIRVLPNSFFRLEKLEKLNLDQNPLEFPPQEMV 391

Query: 196 EQGLSAVKGYL---------SEKMNNDHKSPKKK------SW----VGKLVKYGTFNGAL 236
            Q   AV+ ++          E++ +  ++ K++      SW    V  L   GT  GA 
Sbjct: 392 NQSAEAVREFMRKRWEEMVEEEQLRSVIEAEKQRGATGWLSWGSSIVTSLFSGGTHGGAA 451

Query: 237 R 237
           +
Sbjct: 452 K 452



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 67/112 (59%), Gaps = 2/112 (1%)

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           ++ + ++  ++ +LP +L  +  L  L+   N LK LP+ +  L  LE L++S N   L 
Sbjct: 163 VERIDLSDRELKLLPDALGKIVGLVSLNLSRNNLKFLPDTISGLEKLEELDLSSN--RLV 220

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +LP SIG+L++L  L+V+ NK+T+LP+SI   R L +L    N L S P ++
Sbjct: 221 SLPDSIGMLLNLRILNVTGNKLTSLPESIAQCRSLVELDASFNNLTSLPANI 272


>gi|18391461|ref|NP_563921.1| ras group-related protein LRR 3 [Arabidopsis thaliana]
 gi|17063165|gb|AAL32979.1| At1g12970/F13K23_18 [Arabidopsis thaliana]
 gi|21700931|gb|AAM70589.1| At1g12970/F13K23_18 [Arabidopsis thaliana]
 gi|57868148|gb|AAW57412.1| plant intracellular Ras-group-related LRR protein 3 [Arabidopsis
           thaliana]
 gi|332190834|gb|AEE28955.1| ras group-related protein LRR 3 [Arabidopsis thaliana]
          Length = 464

 Score =  167 bits (423), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 97/221 (43%), Positives = 137/221 (61%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+ SN+L  LP+SIG L  L++L+V+GN L  LP++I  CRSL EL+A+FN L  LP  
Sbjct: 212 LDLSSNRLVFLPDSIGLLLNLRILNVTGNKLTLLPESIAQCRSLVELDASFNNLTSLPAN 271

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
            G+ L+NL+ LSI  NKI   P S+  + SLR LDA +N +  LP  +  L NLEV+N+S
Sbjct: 272 FGYGLLNLERLSIQLNKIRFFPNSICEMRSLRYLDAHMNEIHGLPIAIGRLTNLEVMNLS 331

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            NF  L  LP +I  L +L ELD+S N+I  LPDS   L KL+KL+L+ NPL  PP ++V
Sbjct: 332 SNFSDLIELPDTISDLANLRELDLSNNQIRVLPDSFFRLEKLEKLNLDQNPLEYPPQEMV 391

Query: 196 EQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGAL 236
            Q   AV+ ++ ++     +  + +S +    + G   G L
Sbjct: 392 NQSAEAVREFMRKRWEEMVEEEQLRSVIEAEKQQGGATGWL 432



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 65/111 (58%), Gaps = 2/111 (1%)

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           ++ + ++ +++ +LP +L  +  L  L+   N L+ LP+ +  L  LE L++S N   L 
Sbjct: 163 VERIDLSDHELKLLPDALGKIVGLVSLNVSRNNLRFLPDTISGLEKLEELDLSSN--RLV 220

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMD 193
            LP SIGLL++L  L+V+ NK+T LP+SI   R L +L    N L S P +
Sbjct: 221 FLPDSIGLLLNLRILNVTGNKLTLLPESIAQCRSLVELDASFNNLTSLPAN 271


>gi|115447043|ref|NP_001047301.1| Os02g0593600 [Oryza sativa Japonica Group]
 gi|46805022|dbj|BAD16887.1| putative leucine-rich protein [Oryza sativa Japonica Group]
 gi|50726485|dbj|BAD34094.1| putative leucine-rich protein [Oryza sativa Japonica Group]
 gi|113536832|dbj|BAF09215.1| Os02g0593600 [Oryza sativa Japonica Group]
 gi|125582715|gb|EAZ23646.1| hypothetical protein OsJ_07347 [Oryza sativa Japonica Group]
 gi|215697713|dbj|BAG91707.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 501

 Score =  166 bits (421), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 106/278 (38%), Positives = 148/278 (53%), Gaps = 49/278 (17%)

Query: 2   IPESLTARLLNVVVLDVHSNQLK-----------------------CLPNSIGCLSKLKV 38
           +PE L  R+  ++VLDV  NQLK                        LP+SIG L+ LK+
Sbjct: 206 LPEQL-GRIRGLLVLDVSRNQLKNVPDAIGGLEHLEELRLASNALVSLPDSIGLLTSLKI 264

Query: 39  LDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ 98
           LDVSGN L SLP +I  CRSL EL+ ++N L  LP  IG E+  L+ L ++ NK+  LP 
Sbjct: 265 LDVSGNKLRSLPDSISKCRSLVELDVSYNVLSYLPTGIGQEMARLEKLWVHLNKLRSLPS 324

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
           S+  + SLR+LDA  N L+ LP  +  L  LE LN+S NF  +  LP S G L+ L ELD
Sbjct: 325 SVCEMRSLRLLDAHFNQLRGLPAGIGRLAALESLNLSSNFSDMRDLPASFGDLLGLRELD 384

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPK 218
           +S N+I  LPD  G L++L++L L+ NPL  PP +VV  G+ AVK Y++ +  +     +
Sbjct: 385 LSNNQIHALPDCFGRLQRLERLRLDQNPLAVPPKEVVAGGVGAVKEYMARRWRDARAEEE 444

Query: 219 KK-------------------------SWVGKLVKYGT 231
           ++                         SWV  + +YG 
Sbjct: 445 RRGSAVAESPRVSTPKEWLVRSVSSLGSWVSDVTRYGA 482



 Score = 43.9 bits (102), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 33/53 (62%)

Query: 139 QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           + L  LP  +G +  L+ LDVS N++  +PD+IG L  L++L L  N LVS P
Sbjct: 201 RQLRHLPEQLGRIRGLLVLDVSRNQLKNVPDAIGGLEHLEELRLASNALVSLP 253


>gi|297818186|ref|XP_002876976.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322814|gb|EFH53235.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 471

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/209 (44%), Positives = 139/209 (66%), Gaps = 1/209 (0%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IPE+++ +L  +  LDV SN L+ LP+SIG L  L++L+V+GN L +LP++I +CRSL 
Sbjct: 197 VIPEAIS-KLKKLEELDVSSNSLESLPDSIGMLLNLRILNVNGNNLTALPESIAHCRSLV 255

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+A++N L  LP  IG+ L NL+ LSI  NK+   P S++ + +L+ LDA +N +  +P
Sbjct: 256 ELDASYNNLTTLPTNIGYGLQNLERLSIQLNKLRYFPGSISEMYNLKYLDAHMNEIHGIP 315

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             +  L  LEVLN+S NF  L  +P +I  L +L ELD+S N+I  +PDS   LRKL+KL
Sbjct: 316 NSIGRLTKLEVLNLSSNFNNLMGVPDTITDLTNLRELDLSNNQIQAIPDSFYRLRKLEKL 375

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEK 209
           +L+ NPL  P   V  QG  AV+ ++ ++
Sbjct: 376 NLDENPLEIPSQKVAGQGAEAVREFMRKR 404



 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 32/175 (18%)

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           ++ + ++  ++ +LP++   +  L  L+   N L  +PE +  L  LE L++S N   LE
Sbjct: 162 VERIDLSGQELKLLPEAFWKVVGLVYLNLSGNDLTVIPEAISKLKKLEELDVSSN--SLE 219

Query: 143 TLPYSIGLLM-----------------------SLVELDVSYNKITTLPDSIG-CLRKLQ 178
           +LP SIG+L+                       SLVELD SYN +TTLP +IG  L+ L+
Sbjct: 220 SLPDSIGMLLNLRILNVNGNNLTALPESIAHCRSLVELDASYNNLTTLPTNIGYGLQNLE 279

Query: 179 KLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFN 233
           +LS++ N L   P  + E  +  +K YL   MN  H  P     +G+L K    N
Sbjct: 280 RLSIQLNKLRYFPGSISE--MYNLK-YLDAHMNEIHGIPNS---IGRLTKLEVLN 328


>gi|125540110|gb|EAY86505.1| hypothetical protein OsI_07885 [Oryza sativa Indica Group]
          Length = 501

 Score =  164 bits (416), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/278 (38%), Positives = 148/278 (53%), Gaps = 49/278 (17%)

Query: 2   IPESLTARLLNVVVLDVHSNQLK-----------------------CLPNSIGCLSKLKV 38
           +PE L  R+  ++VLDV  NQLK                        LP+SIG L+ LK+
Sbjct: 206 LPEQL-GRIRGLLVLDVSRNQLKNVPDAIGGLEHLEELRLASNALVSLPDSIGLLTSLKI 264

Query: 39  LDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ 98
           LDVSGN L SLP +I  CRSL EL+ ++N L  LP  IG E+  L+ L ++ NK+  LP 
Sbjct: 265 LDVSGNKLRSLPDSISKCRSLVELDVSYNVLSYLPTGIGQEMARLEKLWVHLNKLRSLPS 324

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
           S+  + SLR+LDA  N L+ LP  +  L  LE LN+S NF  +  LP S G L+ L ELD
Sbjct: 325 SVCEMRSLRLLDAHFNQLRGLPAGIGRLAALESLNLSSNFSDMRDLPASFGDLLGLRELD 384

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPK 218
           +S N+I  LPD  G L++L++L L+ NPL  PP +VV  G+ AVK Y++ +  +     +
Sbjct: 385 LSNNQIHALPDCFGRLQRLERLRLDQNPLAVPPKEVVAGGVGAVKEYMARRWCDARAEEE 444

Query: 219 KK-------------------------SWVGKLVKYGT 231
           ++                         SWV  + +YG 
Sbjct: 445 RRGSAVAESPRVSTPKEWLVRSVSSLGSWVSDVTRYGA 482



 Score = 43.9 bits (102), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 33/53 (62%)

Query: 139 QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           + L  LP  +G +  L+ LDVS N++  +PD+IG L  L++L L  N LVS P
Sbjct: 201 RQLRHLPEQLGRIRGLLVLDVSRNQLKNVPDAIGGLEHLEELRLASNALVSLP 253


>gi|30688342|ref|NP_189281.2| plant intracellular ras group-related LRR 2 [Arabidopsis thaliana]
 gi|9293927|dbj|BAB01830.1| leucine-rich-repeat protein-like [Arabidopsis thaliana]
 gi|26453000|dbj|BAC43576.1| unknown protein [Arabidopsis thaliana]
 gi|29824149|gb|AAP04035.1| unknown protein [Arabidopsis thaliana]
 gi|57868146|gb|AAW57411.1| plant intracellular Ras-group-related LRR protein 2 [Arabidopsis
           thaliana]
 gi|332643646|gb|AEE77167.1| plant intracellular ras group-related LRR 2 [Arabidopsis thaliana]
          Length = 471

 Score =  163 bits (412), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 94/234 (40%), Positives = 148/234 (63%), Gaps = 2/234 (0%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            IP++++ +L  +  LDV SN L+ LP+SIG L  L++L+V+ N L +LP++I +CRSL 
Sbjct: 197 FIPDAIS-KLKKLEELDVSSNSLESLPDSIGMLLNLRILNVNANNLTALPESIAHCRSLV 255

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+A++N L  LP  IG+ L NL+ LSI  NK+   P S++ + +L+ LDA +N +  +P
Sbjct: 256 ELDASYNNLTSLPTNIGYGLQNLERLSIQLNKLRYFPGSISEMYNLKYLDAHMNEIHGIP 315

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             +  L  LEVLN+S NF  L  +P +I  L +L ELD+S N+I  +PDS   LRKL+KL
Sbjct: 316 NSIGRLTKLEVLNLSSNFNNLMGVPDTITDLTNLRELDLSNNQIQAIPDSFYRLRKLEKL 375

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNG 234
           +L+ NPL  P  +V  QG   V+ ++ ++  +     +++  V +  ++G  NG
Sbjct: 376 NLDQNPLEIPSQEVATQGAEVVREFMRKRWGDIMAEQQQRIGV-EAERHGDENG 428



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 48/246 (19%)

Query: 13  VVVLD-VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           VV LD VH +  K L ++   LS++   +V   L           RS EE+N     + +
Sbjct: 106 VVRLDEVHDSYEKKLKDTEEELSRVYSTEVESML-----------RSGEEVNEKVLAVLK 154

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
             ++ G     ++ + ++  ++ ++P++   +  L  L+   N L  +P+ +  L  LE 
Sbjct: 155 EAESGG----TVERIDLSSQELKLIPEAFWKVVGLVYLNLSGNDLTFIPDAISKLKKLEE 210

Query: 132 LNISQNFQYLETLPYSIGLLM-----------------------SLVELDVSYNKITTLP 168
           L++S N   LE+LP SIG+L+                       SLVELD SYN +T+LP
Sbjct: 211 LDVSSN--SLESLPDSIGMLLNLRILNVNANNLTALPESIAHCRSLVELDASYNNLTSLP 268

Query: 169 DSIG-CLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
            +IG  L+ L++LS++ N L   P  + E  +  +K YL   MN  H  P     +G+L 
Sbjct: 269 TNIGYGLQNLERLSIQLNKLRYFPGSISE--MYNLK-YLDAHMNEIHGIPNS---IGRLT 322

Query: 228 KYGTFN 233
           K    N
Sbjct: 323 KLEVLN 328


>gi|242079987|ref|XP_002444762.1| hypothetical protein SORBIDRAFT_07g027580 [Sorghum bicolor]
 gi|241941112|gb|EES14257.1| hypothetical protein SORBIDRAFT_07g027580 [Sorghum bicolor]
          Length = 578

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/226 (44%), Positives = 135/226 (59%), Gaps = 6/226 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P SL  RL+ +  LDV +N L  LP++IG L  LK L V  N L+ LP TI NC SL E
Sbjct: 337 LPPSL-GRLVKLEELDVSANHLTSLPDAIGSLKHLKKLIVETNNLDELPYTIGNCVSLVE 395

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L A +N L+ LP+ +G +L +L+ LS+  N I  LP ++  LT L+ +DA  N L+S+PE
Sbjct: 396 LRAGYNHLKALPEAVG-KLESLEVLSVRYNSIRGLPTTMASLTKLKEVDASFNELESIPE 454

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +   + +L  LN+  NF  L++LP SIG L  L ELD+S N+I  LPDS G L+ L+ L 
Sbjct: 455 NFCFVTSLVKLNVGNNFADLQSLPRSIGNLEMLEELDISNNQIRVLPDSFGNLQHLRVLR 514

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSE----KMNNDHKSPKKKSWV 223
            E NPL  PP DV  +G  A   Y+SE    K      +  KK+WV
Sbjct: 515 AEENPLQVPPRDVALKGAQAAVQYMSEYVTKKATRSQPTKTKKTWV 560



 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/171 (40%), Positives = 104/171 (60%), Gaps = 3/171 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           NQ++ LP+SIG L+ L  LD+S N + +LP+ I    SL +L+A+ N++  LPD+IG +L
Sbjct: 263 NQIEWLPDSIGKLTGLVTLDISENRILTLPEAIGRLSSLAKLDAHSNRISHLPDSIG-DL 321

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            NL  L +  N++  LP SL  L  L  LD   N L SLP+ + +L +L+ L +  N   
Sbjct: 322 SNLIYLDLRGNQLASLPPSLGRLVKLEELDVSANHLTSLPDAIGSLKHLKKLIVETN--N 379

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L+ LPY+IG  +SLVEL   YN +  LP+++G L  L+ LS+  N +   P
Sbjct: 380 LDELPYTIGNCVSLVELRAGYNHLKALPEAVGKLESLEVLSVRYNSIRGLP 430



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 2/79 (2%)

Query: 113 LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
           +N ++ LP+ +  L  L  L+IS+N   + TLP +IG L SL +LD   N+I+ LPDSIG
Sbjct: 262 MNQIEWLPDSIGKLTGLVTLDISEN--RILTLPEAIGRLSSLAKLDAHSNRISHLPDSIG 319

Query: 173 CLRKLQKLSLEGNPLVSPP 191
            L  L  L L GN L S P
Sbjct: 320 DLSNLIYLDLRGNQLASLP 338


>gi|168045665|ref|XP_001775297.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673378|gb|EDQ59902.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 349

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/246 (41%), Positives = 142/246 (57%), Gaps = 37/246 (15%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCR------------ 57
           L+N+V L+VHSN+LK LP SIG LSKLK+L+VSGNLL++LP+ + +CR            
Sbjct: 104 LVNLVALNVHSNKLKSLPESIGNLSKLKILNVSGNLLKALPENLSSCRYAQTLFCGFMFS 163

Query: 58  -------------------------SLEELNANFNKLRQLPDTIGFELINLKTLSINCNK 92
                                     L ELNANFN+L       G++L+ L+ L    N 
Sbjct: 164 VTSTKKIARFLRILPQFLIVLIVCSELVELNANFNQLETWMPVFGWKLVKLRKLEFQFNN 223

Query: 93  IVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLM 152
           +V LP+S  HL  L+ LD R N L+ LP  + +L +LE L++S+NF  L TLP +IG L 
Sbjct: 224 LVGLPESFGHLKELKHLDLRNNHLRGLPLSIGSLSHLETLDLSRNFSNLCTLPDTIGNLA 283

Query: 153 SLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNN 212
           SL+ LD+S+N+I  LP ++G L+ L+ L L+ NPLV PP  V+E    AV  YL + + N
Sbjct: 284 SLLTLDLSFNQIRELPPALGKLKNLKNLMLDQNPLVVPPKRVIEHSQEAVLAYLLDLLEN 343

Query: 213 DHKSPK 218
             +S +
Sbjct: 344 GVESKQ 349



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 100/196 (51%), Gaps = 37/196 (18%)

Query: 35  KLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
           KL+  +  G  L+++P+++ +   L  LN + N+L  +P  IG +L+NL  L+++ NK+ 
Sbjct: 60  KLEHFEFCGKELKNIPRSLMSITCLSSLNLSNNQLEVVPSEIG-DLVNLVALNVHSNKLK 118

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLEN----------------------------- 125
            LP+S+ +L+ L++L+   N LK+LPE+L +                             
Sbjct: 119 SLPESIGNLSKLKILNVSGNLLKALPENLSSCRYAQTLFCGFMFSVTSTKKIARFLRILP 178

Query: 126 ------LINLEVLNISQNFQYLET-LPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQ 178
                 ++  E++ ++ NF  LET +P     L+ L +L+  +N +  LP+S G L++L+
Sbjct: 179 QFLIVLIVCSELVELNANFNQLETWMPVFGWKLVKLRKLEFQFNNLVGLPESFGHLKELK 238

Query: 179 KLSLEGNPLVSPPMDV 194
            L L  N L   P+ +
Sbjct: 239 HLDLRNNHLRGLPLSI 254


>gi|357485651|ref|XP_003613113.1| Leucine-rich-repeat protein-like protein [Medicago truncatula]
 gi|355514448|gb|AES96071.1| Leucine-rich-repeat protein-like protein [Medicago truncatula]
          Length = 456

 Score =  160 bits (406), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 97/209 (46%), Positives = 140/209 (66%), Gaps = 1/209 (0%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP+S+T  L  +  LD+ SN L  LP+ IG L  LKVL++SGN L +LP++I  CRSL 
Sbjct: 187 VIPDSITG-LQKLAELDMSSNLLPSLPDCIGLLVNLKVLNLSGNKLTTLPESISLCRSLV 245

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN L  LP  I + L+NL+ LSI+ NKI  LP S+  + SLR LD   N L  LP
Sbjct: 246 ELDVSFNNLMCLPTNIAYGLVNLEKLSIHLNKIRFLPLSIGEMKSLRYLDVHFNELHGLP 305

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           + +  L NLE LNIS NF  +  LP ++G L++L ELD+S N+I  LP +   L KL KL
Sbjct: 306 QSIGKLTNLEYLNISSNFNDMTQLPETVGGLVNLKELDLSNNQIRALPYAFCRLEKLTKL 365

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEK 209
           +L+ NP++ PP++V+ QG+ A+K +++++
Sbjct: 366 NLDQNPIIVPPLEVLNQGVEAMKEFMAKR 394


>gi|356502043|ref|XP_003519831.1| PREDICTED: LOW QUALITY PROTEIN: protein lap1-like [Glycine max]
          Length = 346

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/208 (45%), Positives = 135/208 (64%), Gaps = 8/208 (3%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP+S+ A L  +V LDV SN L+ LP+SIG L  LK+L+VS + L +LP++I  CRSL 
Sbjct: 84  VIPDSI-AGLKKLVELDVSSNVLESLPDSIGLLVNLKILNVSASKLIALPESIALCRSLV 142

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+A+FN L  LP  +GF  +NL+ L I+ NK   +P S+  + SLR LD   N L  LP
Sbjct: 143 ELDASFNNLVCLPTNMGFGPVNLEKLLIHLNKXQFVPASIGEMKSLRHLDVHFNELHGLP 202

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             +  L NLE LN+S NF  +  LP ++G L++L ELD+S N+I  LP        L KL
Sbjct: 203 XSIGKLTNLEYLNVSSNFSDMTELPETLGDLVNLRELDLSNNQIRALP-------XLTKL 255

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSE 208
           +L+ NP++ PP++VV QG  AVK ++++
Sbjct: 256 NLDQNPIIVPPIEVVNQGAEAVKDFMAK 283


>gi|302817824|ref|XP_002990587.1| hypothetical protein SELMODRAFT_185397 [Selaginella moellendorffii]
 gi|300141755|gb|EFJ08464.1| hypothetical protein SELMODRAFT_185397 [Selaginella moellendorffii]
          Length = 412

 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/210 (42%), Positives = 132/210 (62%), Gaps = 1/210 (0%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+++ A L N+  L V SN+L+ LP+SIG +  LK L+ S N L+ LP+ I  C +L 
Sbjct: 144 VLPDAI-AGLANLERLQVQSNRLRILPDSIGLMKNLKYLNCSRNQLKQLPERISGCSALI 202

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           ELNA+FNK+  LP + G  + +L+ LS+  N +  LP +L  + +L+ LD   N L+SLP
Sbjct: 203 ELNADFNKIEYLPSSFGRGMDSLERLSLQLNSLTYLPPTLCEVKTLKHLDLHFNKLRSLP 262

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             + NL  LE L+ S NF  L  LP S+  L+SL  LD+ YN+I  LP S G L  ++ L
Sbjct: 263 RAIGNLTRLETLDASSNFSDLTALPESMADLVSLTHLDLRYNQIRELPLSFGRLTNIKTL 322

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEKM 210
            L+ NPLV PP+++V+QG  A   YL+ ++
Sbjct: 323 ELDENPLVDPPLEIVQQGTPATMKYLAYRL 352



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 27/132 (20%)

Query: 90  CNK-IVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSI 148
           CN+ + ++P+S+  ++SL  L+   N ++ LP+ +  L NLE L +  N   L  LP SI
Sbjct: 115 CNQSLQLVPESIGRISSLVDLNLSTNQIEVLPDAIAGLANLERLQVQSN--RLRILPDSI 172

Query: 149 GLLM-----------------------SLVELDVSYNKITTLPDSIG-CLRKLQKLSLEG 184
           GL+                        +L+EL+  +NKI  LP S G  +  L++LSL+ 
Sbjct: 173 GLMKNLKYLNCSRNQLKQLPERISGCSALIELNADFNKIEYLPSSFGRGMDSLERLSLQL 232

Query: 185 NPLVSPPMDVVE 196
           N L   P  + E
Sbjct: 233 NSLTYLPPTLCE 244


>gi|302803741|ref|XP_002983623.1| hypothetical protein SELMODRAFT_119044 [Selaginella moellendorffii]
 gi|300148460|gb|EFJ15119.1| hypothetical protein SELMODRAFT_119044 [Selaginella moellendorffii]
          Length = 427

 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/210 (42%), Positives = 131/210 (62%), Gaps = 1/210 (0%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+++ A L N+  L V SN+L+ LP+SIG +  LK L+ S N L+ LP++I  C +L 
Sbjct: 159 VLPDAI-AGLANLERLQVQSNRLRILPDSIGLMKNLKYLNCSRNQLKQLPESISGCSALI 217

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           ELNA+FNKL  LP   G  + +L+ LS+  N +  LP +L    +L+ LD   N L+SLP
Sbjct: 218 ELNADFNKLEYLPSRFGRGMDSLERLSLQLNSLTYLPPTLCEAQTLKHLDLHFNKLRSLP 277

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             + NL  LE L+ S NF  L  LP S+  L+SL  LD+ YN+I  LP S G L  ++ L
Sbjct: 278 RAIGNLTRLETLDASSNFSDLTALPESMADLVSLTHLDLRYNQIRELPLSFGRLTNIKTL 337

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEKM 210
            L+ NPLV PP+++V+QG  A   YL+ ++
Sbjct: 338 ELDENPLVDPPLEIVQQGTPATMKYLAYRL 367



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 53/86 (61%), Gaps = 4/86 (4%)

Query: 90  CNK-IVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSI 148
           CN+ + ++P+S+  ++SL  L+   N ++ LP+ +  L NLE L +  N   L  LP SI
Sbjct: 130 CNQSLQLVPESIGRISSLVDLNLSTNQVEVLPDAIAGLANLERLQVQSN--RLRILPDSI 187

Query: 149 GLLMSLVELDVSYNKITTLPDSI-GC 173
           GL+ +L  L+ S N++  LP+SI GC
Sbjct: 188 GLMKNLKYLNCSRNQLKQLPESISGC 213


>gi|414869438|tpg|DAA47995.1| TPA: hypothetical protein ZEAMMB73_132219 [Zea mays]
          Length = 577

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/226 (42%), Positives = 134/226 (59%), Gaps = 6/226 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P SL  RL+ +  LDV +N L  LP+SIG L++LK L    N L+ LP TI NC SL E
Sbjct: 334 LPASL-GRLVKLEELDVSANHLTSLPDSIGSLTRLKKLIAETNDLDELPYTIGNCVSLVE 392

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L   +N L+ LP+ +G +L +L+ LS+  N I  LP ++  LT L+ +DA  N L+S+PE
Sbjct: 393 LRVGYNHLKALPEAVG-KLESLEVLSVRYNTIRGLPTTMASLTKLKEVDASFNELESIPE 451

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +   + +L  LN+  NF  L++LP SIG L  L ELD+S N+I  LPDS G L++L+ L 
Sbjct: 452 NFCFVTSLIKLNVGNNFADLQSLPRSIGNLEMLEELDISNNQIRVLPDSFGNLQRLRVLR 511

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSE----KMNNDHKSPKKKSWV 223
            E NPL  PP DV  +G  A   Y++E    K         KK+W 
Sbjct: 512 AEENPLQVPPRDVALKGAQAAVQYMAEYVAKKATRSQPMKTKKTWA 557



 Score =  110 bits (275), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 70/171 (40%), Positives = 103/171 (60%), Gaps = 3/171 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           NQ++ LP+SIG L+ L  LD+S N + +LP+ I    SL +L+ + N++ QLP++IG +L
Sbjct: 260 NQIEWLPDSIGKLTGLVTLDISENRILALPEAIGMLSSLAKLDLHANRIAQLPESIG-DL 318

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            NL  L +  N++  LP SL  L  L  LD   N L SLP+ + +L  L+ L    N   
Sbjct: 319 SNLIYLDLRGNQLASLPASLGRLVKLEELDVSANHLTSLPDSIGSLTRLKKLIAETN--D 376

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L+ LPY+IG  +SLVEL V YN +  LP+++G L  L+ LS+  N +   P
Sbjct: 377 LDELPYTIGNCVSLVELRVGYNHLKALPEAVGKLESLEVLSVRYNTIRGLP 427



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 3/129 (2%)

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
            N++  LPD+IG +L  L TL I+ N+I+ LP+++  L+SL  LD   N +  LPE + +
Sbjct: 259 MNQIEWLPDSIG-KLTGLVTLDISENRILALPEAIGMLSSLAKLDLHANRIAQLPESIGD 317

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L NL  L++  N   L +LP S+G L+ L ELDVS N +T+LPDSIG L +L+KL  E N
Sbjct: 318 LSNLIYLDLRGN--QLASLPASLGRLVKLEELDVSANHLTSLPDSIGSLTRLKKLIAETN 375

Query: 186 PLVSPPMDV 194
            L   P  +
Sbjct: 376 DLDELPYTI 384


>gi|168008240|ref|XP_001756815.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692053|gb|EDQ78412.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 444

 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/206 (44%), Positives = 130/206 (63%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L+N+V L+VHSNQLK LP+SIG LSKL +L+VSGN L++LP ++  C  + ELNA+FN+L
Sbjct: 160 LVNLVELNVHSNQLKSLPDSIGNLSKLTILNVSGNQLKTLPMSLSKCSKMLELNAHFNQL 219

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
                  G++L  L+ L +  N +V LP+S  +L+ L  LD   N L  LP  +  L +L
Sbjct: 220 EIWLPVFGWKLAMLRKLELQFNNLVTLPESFGYLSGLEHLDLSNNRLCCLPTSVGLLSHL 279

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           + L++S+NF  L  LP+S+G L  L  LD+S+N+I  LP S+G L+ L+ L L+ NPL  
Sbjct: 280 KTLDLSRNFNNLCNLPHSLGNLTCLSTLDLSFNQIRVLPSSLGKLQNLKNLVLDQNPLTV 339

Query: 190 PPMDVVEQGLSAVKGYLSEKMNNDHK 215
           PP  V+E    AV  YL +   N  K
Sbjct: 340 PPKQVIEHSQEAVMAYLLDLYENGAK 365



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 2/90 (2%)

Query: 105 SLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
           +L   D     LKS P     + +L  LN+S N   LE LP  +G L++LVEL+V  N++
Sbjct: 116 TLEHFDFSGKALKSFPRSWTAMSSLISLNLSNN--QLEALPSDVGGLVNLVELNVHSNQL 173

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            +LPDSIG L KL  L++ GN L + PM +
Sbjct: 174 KSLPDSIGNLSKLTILNVSGNQLKTLPMSL 203


>gi|125603982|gb|EAZ43307.1| hypothetical protein OsJ_27903 [Oryza sativa Japonica Group]
          Length = 576

 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/225 (44%), Positives = 135/225 (60%), Gaps = 5/225 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P S+  RLLN+  LDV SN L  LP+SIG L++LK L V  N L+ LP TI +C SL E
Sbjct: 334 LPSSI-GRLLNLEELDVGSNGLSSLPDSIGSLTRLKKLIVETNDLDELPYTIGHCVSLVE 392

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L A +N L+ LP+ +G +L  L+ LS+  N +  LP ++  LT L+ +D   N L+S+PE
Sbjct: 393 LQAGYNHLKALPEAVG-KLEPLEILSVRYNNLRSLPTTMASLTKLKEVDVSFNELESIPE 451

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +     +L  LN+  NF  L+ LP SIG L  L ELD+S N+I  LPDS G L+ L+ L 
Sbjct: 452 NFCFATSLIKLNVGNNFADLQYLPRSIGNLEMLEELDMSNNQIRVLPDSFGNLKHLRVLR 511

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSP---KKKSWV 223
            E NPL  PP D+  +G  AV  Y+S+      KS     KK+WV
Sbjct: 512 AEENPLQVPPRDIALKGAQAVVQYMSDASKRTTKSEPMKPKKTWV 556



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 104/170 (61%), Gaps = 3/170 (1%)

Query: 22  QLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELI 81
           Q++ LP+SIG L+ L  LD+S N L +LP  I    SL +L+ + N++ QLP++IG +L 
Sbjct: 261 QIEWLPDSIGKLTGLVTLDISENRLLALPDAIGKLFSLAKLDIHANRISQLPESIG-DLR 319

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           +L  L++  N++  LP S+  L +L  LD   N L SLP+ + +L  L+ L +  N   L
Sbjct: 320 SLIYLNMRGNQLSSLPSSIGRLLNLEELDVGSNGLSSLPDSIGSLTRLKKLIVETN--DL 377

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           + LPY+IG  +SLVEL   YN +  LP+++G L  L+ LS+  N L S P
Sbjct: 378 DELPYTIGHCVSLVELQAGYNHLKALPEAVGKLEPLEILSVRYNNLRSLP 427



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/127 (42%), Positives = 79/127 (62%), Gaps = 3/127 (2%)

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           ++  LPD+IG +L  L TL I+ N+++ LP ++  L SL  LD   N +  LPE + +L 
Sbjct: 261 QIEWLPDSIG-KLTGLVTLDISENRLLALPDAIGKLFSLAKLDIHANRISQLPESIGDLR 319

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  LN+  N   L +LP SIG L++L ELDV  N +++LPDSIG L +L+KL +E N L
Sbjct: 320 SLIYLNMRGN--QLSSLPSSIGRLLNLEELDVGSNGLSSLPDSIGSLTRLKKLIVETNDL 377

Query: 188 VSPPMDV 194
              P  +
Sbjct: 378 DELPYTI 384


>gi|42408795|dbj|BAD10056.1| putative PSR9 [Oryza sativa Japonica Group]
 gi|125562149|gb|EAZ07597.1| hypothetical protein OsI_29848 [Oryza sativa Indica Group]
          Length = 576

 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/225 (44%), Positives = 135/225 (60%), Gaps = 5/225 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P S+  RLLN+  LDV SN L  LP+SIG L++LK L V  N L+ LP TI +C SL E
Sbjct: 334 LPSSI-GRLLNLEELDVGSNGLSSLPDSIGSLTRLKKLIVETNDLDELPYTIGHCVSLVE 392

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L A +N L+ LP+ +G +L  L+ LS+  N +  LP ++  LT L+ +D   N L+S+PE
Sbjct: 393 LQAGYNHLKALPEAVG-KLEPLEILSVRYNNLRSLPTTMASLTKLKEVDVSFNELESIPE 451

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +     +L  LN+  NF  L+ LP SIG L  L ELD+S N+I  LPDS G L+ L+ L 
Sbjct: 452 NFCFATSLIKLNVGNNFADLQYLPRSIGNLEMLEELDMSNNQIRVLPDSFGNLKHLRVLR 511

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSP---KKKSWV 223
            E NPL  PP D+  +G  AV  Y+S+      KS     KK+WV
Sbjct: 512 AEENPLQVPPRDIALKGAQAVVQYMSDASKRTTKSEPMKPKKTWV 556



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 104/170 (61%), Gaps = 3/170 (1%)

Query: 22  QLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELI 81
           Q++ LP+SIG L+ L  LD+S N L +LP  I    SL +L+ + N++ QLP++IG +L 
Sbjct: 261 QIEWLPDSIGKLTGLVTLDISENRLLALPDAIGKLFSLAKLDIHANRISQLPESIG-DLR 319

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           +L  L++  N++  LP S+  L +L  LD   N L SLP+ + +L  L+ L +  N   L
Sbjct: 320 SLIYLNMRGNQLSSLPSSIGRLLNLEELDVGSNGLSSLPDSIGSLTRLKKLIVETN--DL 377

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           + LPY+IG  +SLVEL   YN +  LP+++G L  L+ LS+  N L S P
Sbjct: 378 DELPYTIGHCVSLVELQAGYNHLKALPEAVGKLEPLEILSVRYNNLRSLP 427



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/127 (42%), Positives = 79/127 (62%), Gaps = 3/127 (2%)

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           ++  LPD+IG +L  L TL I+ N+++ LP ++  L SL  LD   N +  LPE + +L 
Sbjct: 261 QIEWLPDSIG-KLTGLVTLDISENRLLALPDAIGKLFSLAKLDIHANRISQLPESIGDLR 319

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  LN+  N   L +LP SIG L++L ELDV  N +++LPDSIG L +L+KL +E N L
Sbjct: 320 SLIYLNMRGN--QLSSLPSSIGRLLNLEELDVGSNGLSSLPDSIGSLTRLKKLIVETNDL 377

Query: 188 VSPPMDV 194
              P  +
Sbjct: 378 DELPYTI 384


>gi|255583434|ref|XP_002532476.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223527801|gb|EEF29900.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 581

 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 94/219 (42%), Positives = 137/219 (62%), Gaps = 4/219 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +RL+ +  LD+ SN L  LP SIG L  LK+L+V  N +E +P +I  C SL+EL+A++N
Sbjct: 343 SRLVRLQELDLSSNHLSSLPESIGSLISLKILNVETNDIEEIPHSIGRCSSLKELHADYN 402

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP+ +G ++  L+ LS+  N I  LP +++ L +L+ L+   N L+S+PE L    
Sbjct: 403 RLKALPEAVG-KIETLEVLSVRYNNIKQLPTTMSSLLNLKELNVSFNELESVPESLCFAT 461

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  +NI  NF  L+ LP SIG L +L ELD+S N+I  LPDS   L KL+ L +E NPL
Sbjct: 462 SLVKINIGNNFADLQYLPRSIGNLENLEELDISNNQIRALPDSFRMLTKLRVLRVEQNPL 521

Query: 188 VSPPMDVVEQGLSAVKGYLSEKMN-NDHKSP--KKKSWV 223
             PP  + E+G  AV  Y++E     D K+P  +KKSW 
Sbjct: 522 EVPPRHIAEKGAQAVVQYMAELFEKKDVKTPIKQKKSWA 560



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 107/171 (62%), Gaps = 3/171 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           +Q++ LP+SIG LS L  LD+S N + +LP TI    SL +L+ + NK+ +LP++IG +L
Sbjct: 264 DQIEWLPDSIGKLSNLVSLDLSENRIVALPATIGGLSSLTKLDLHSNKIAELPESIG-DL 322

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
           ++L  L +  N I  LP + + L  L+ LD   N L SLPE + +LI+L++LN+  N   
Sbjct: 323 LSLVFLDLRANHISSLPATFSRLVRLQELDLSSNHLSSLPESIGSLISLKILNVETN--D 380

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           +E +P+SIG   SL EL   YN++  LP+++G +  L+ LS+  N +   P
Sbjct: 381 IEEIPHSIGRCSSLKELHADYNRLKALPEAVGKIETLEVLSVRYNNIKQLP 431



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/132 (36%), Positives = 82/132 (62%), Gaps = 3/132 (2%)

Query: 63  NANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED 122
           N   +++  LPD+IG +L NL +L ++ N+IV LP ++  L+SL  LD   N +  LPE 
Sbjct: 260 NKLMDQIEWLPDSIG-KLSNLVSLDLSENRIVALPATIGGLSSLTKLDLHSNKIAELPES 318

Query: 123 LENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           + +L++L  L++  N  ++ +LP +   L+ L ELD+S N +++LP+SIG L  L+ L++
Sbjct: 319 IGDLLSLVFLDLRAN--HISSLPATFSRLVRLQELDLSSNHLSSLPESIGSLISLKILNV 376

Query: 183 EGNPLVSPPMDV 194
           E N +   P  +
Sbjct: 377 ETNDIEEIPHSI 388


>gi|1871526|emb|CAA57523.1| leucine-rich-repeat protein [Helianthus annuus]
 gi|18857654|emb|CAA57621.1| leucine-rich-repeat protein [Helianthus annuus]
          Length = 540

 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/211 (44%), Positives = 131/211 (62%), Gaps = 1/211 (0%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPESL A L ++  L++ +N  + LP++IG L  L+ L+VS N L SLP  I  CRSL E
Sbjct: 249 IPESL-AGLTSLEELNLSANLFESLPDTIGSLQHLQFLNVSRNKLTSLPDGICKCRSLLE 307

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+A+FN++  LP  IG+ LINLK L +  N +  LP S+  + SL+VLD   N L+ LP 
Sbjct: 308 LDASFNQITYLPANIGYGLINLKKLIMPLNNVRSLPTSIGEMISLQVLDVHFNTLRGLPP 367

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L  LEVLN+  NF     LP +IG L  L ELD+  N+I  LP + G L  L +L 
Sbjct: 368 SIGMLKKLEVLNLGSNFNDFTALPETIGSLTRLRELDICNNQIQQLPITFGRLVSLTRLV 427

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNN 212
           ++ NPL   P +VV +G+ AVK Y+S+++ +
Sbjct: 428 VDHNPLTVSPPEVVAEGVEAVKVYMSKRLYD 458



 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 3/125 (2%)

Query: 71  QLPDTIGFELIN-LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           ++ D +   L+N ++ + ++  ++  +P++   L +L  LD   N L ++PE L  L +L
Sbjct: 200 EMADILQDALMNGVERIDLSRRRLPFVPEAFGKLHTLVSLDLSSNKLTAIPESLAGLTSL 259

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           E LN+S N    E+LP +IG L  L  L+VS NK+T+LPD I   R L +L    N +  
Sbjct: 260 EELNLSANL--FESLPDTIGSLQHLQFLNVSRNKLTSLPDGICKCRSLLELDASFNQITY 317

Query: 190 PPMDV 194
            P ++
Sbjct: 318 LPANI 322



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 9/95 (9%)

Query: 106 LRVLDARLNCL-----KSLPEDLENLINLEVLN----ISQNFQYLETLPYSIGLLMSLVE 156
           L  LD R++ +     + + E++ +++   ++N    I  + + L  +P + G L +LV 
Sbjct: 179 LSALDKRVSSMLPTIAEEVKEEMADILQDALMNGVERIDLSRRRLPFVPEAFGKLHTLVS 238

Query: 157 LDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LD+S NK+T +P+S+  L  L++L+L  N   S P
Sbjct: 239 LDLSSNKLTAIPESLAGLTSLEELNLSANLFESLP 273


>gi|357148421|ref|XP_003574757.1| PREDICTED: protein lap1-like [Brachypodium distachyon]
          Length = 571

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/226 (41%), Positives = 137/226 (60%), Gaps = 6/226 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P SL  RL+N+  LD+ +N++  LP+SIG L++LK L V  N L+ LP TI +C SL E
Sbjct: 328 LPSSL-GRLMNLEELDMGANRIVTLPDSIGSLTRLKKLMVETNDLDELPYTIGHCVSLVE 386

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L A +N L+ LP+ +G +L +L+ LS+  N I  LP ++  LT L+ +DA  N L+S+PE
Sbjct: 387 LQAGYNHLKALPEAVG-KLESLEILSVRYNNIRSLPTTMASLTKLKEVDASFNELESIPE 445

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +   + +L  LN+  NF  ++ LP SIG L  L ELD+S N+I  LPDS G L  L+ L 
Sbjct: 446 NFCFVTSLVKLNVGNNFADMQKLPRSIGNLEMLEELDISNNQIRVLPDSFGNLHHLRVLR 505

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPK----KKSWV 223
            E NPL  PP +V  +G  AV  Y+++    +    +    KK+W 
Sbjct: 506 AEENPLQVPPREVALKGAQAVVQYMADHTTKNATKSQTIKTKKTWA 551



 Score =  100 bits (250), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 65/170 (38%), Positives = 102/170 (60%), Gaps = 3/170 (1%)

Query: 22  QLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELI 81
           Q++ +P+SIG L  L  LD+S N L +LP+ I    SL +L+ + N++  LP++IG +L 
Sbjct: 255 QIEWIPDSIGKLIGLVTLDISENRLVALPEAIGKLSSLTKLDLHANRIALLPESIG-DLR 313

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           +L  L +  N++  LP SL  L +L  LD   N + +LP+ + +L  L+ L +  N   L
Sbjct: 314 SLICLDLRGNQLTSLPSSLGRLMNLEELDMGANRIVTLPDSIGSLTRLKKLMVETN--DL 371

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           + LPY+IG  +SLVEL   YN +  LP+++G L  L+ LS+  N + S P
Sbjct: 372 DELPYTIGHCVSLVELQAGYNHLKALPEAVGKLESLEILSVRYNNIRSLP 421



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/127 (43%), Positives = 82/127 (64%), Gaps = 3/127 (2%)

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           ++  +PD+IG +LI L TL I+ N++V LP+++  L+SL  LD   N +  LPE + +L 
Sbjct: 255 QIEWIPDSIG-KLIGLVTLDISENRLVALPEAIGKLSSLTKLDLHANRIALLPESIGDLR 313

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  L++  N   L +LP S+G LM+L ELD+  N+I TLPDSIG L +L+KL +E N L
Sbjct: 314 SLICLDLRGN--QLTSLPSSLGRLMNLEELDMGANRIVTLPDSIGSLTRLKKLMVETNDL 371

Query: 188 VSPPMDV 194
              P  +
Sbjct: 372 DELPYTI 378


>gi|356496527|ref|XP_003517118.1| PREDICTED: uncharacterized protein LOC100787496 [Glycine max]
          Length = 574

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/230 (40%), Positives = 140/230 (60%), Gaps = 9/230 (3%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S + RL+ +  LD+ SNQL  LP+SIG L +LK+L+V  N +E LP ++ +C SL 
Sbjct: 326 LLPASFS-RLVRLEELDLSSNQLSALPDSIGSLVRLKILNVETNDIEELPHSVGSCSSLR 384

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL  ++N+L+ LP+ +G ++ +L+ LS+  N I  LP +++ LT+L+ L+   N L+S+P
Sbjct: 385 ELRVDYNRLKALPEAVG-KIQSLEILSVRYNNIKQLPTTMSSLTNLKELNVSFNELESVP 443

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E L    +L  +NI  NF  + +LP SIG L  L ELD+S N+I  LP+S   L +L+ L
Sbjct: 444 ESLCFATSLVKMNIGNNFADMRSLPRSIGNLELLEELDISNNQIRVLPESFRMLTRLRVL 503

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKS-------PKKKSWV 223
             E NPL  PP ++ E+G  AV  Y+ E +    K         +KKSW 
Sbjct: 504 RAEENPLEVPPREIAEKGAQAVVQYMDELVEKREKKDVKAQPLKQKKSWA 553



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/171 (38%), Positives = 106/171 (61%), Gaps = 3/171 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           +Q+  LP+SIG LS L  LD+S N + +LP TI    SL  L+ + N++ +LPD++G  L
Sbjct: 253 DQVDWLPDSIGKLSSLVTLDLSENRIMALPATIGGLSSLTRLDLHSNRITELPDSVG-NL 311

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
           ++L  L +  N++ +LP S + L  L  LD   N L +LP+ + +L+ L++LN+  N   
Sbjct: 312 LSLLYLDLRGNQLTLLPASFSRLVRLEELDLSSNQLSALPDSIGSLVRLKILNVETN--D 369

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           +E LP+S+G   SL EL V YN++  LP+++G ++ L+ LS+  N +   P
Sbjct: 370 IEELPHSVGSCSSLRELRVDYNRLKALPEAVGKIQSLEILSVRYNNIKQLP 420


>gi|225438416|ref|XP_002276062.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Vitis vinifera]
 gi|296082577|emb|CBI21582.3| unnamed protein product [Vitis vinifera]
          Length = 557

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/221 (43%), Positives = 134/221 (60%), Gaps = 5/221 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RL+ +  LD+ SN+L  LP SIG L KLK L V  N +E +P TI  C SL+EL A++N+
Sbjct: 319 RLVRLEELDLSSNRLSSLPESIGSLVKLKKLSVETNDIEEIPHTIGQCSSLKELRADYNR 378

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L+ LP+ +G  + +L+ LS+  N I  LP +++ L++LR LD   N L+S+PE L     
Sbjct: 379 LKALPEAVG-RIQSLEILSVRYNNIKQLPTTMSSLSNLRELDVSFNELESIPESLCFATT 437

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L  +NI  NF  L+ LP SIG L  L ELD+S N+I  LPDS   L +L+ L L+ NPL 
Sbjct: 438 LVKMNIGSNFADLQYLPRSIGNLEMLEELDISNNQIRVLPDSFKMLTRLRVLRLDQNPLE 497

Query: 189 SPPMDVVEQGLSAVKGYLSEKM-NNDHKS---PKKKSWVGK 225
            PP  V E G  AV  Y++E +   + KS    +KK+W  +
Sbjct: 498 VPPRHVAEMGAQAVVQYMAELVAKREVKSLPVKQKKTWAQR 538



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 101/165 (61%), Gaps = 3/165 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           +Q++ LP+SIG LS L  LD+S N + +LP TI    SL +L+ + N++ +LPD IG  L
Sbjct: 239 DQIEWLPDSIGKLSSLMTLDLSENRIVALPATIGGLSSLTKLDLHSNRIAELPDCIG-NL 297

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
           +++  L +  N++  LP +   L  L  LD   N L SLPE + +L+ L+ L++  N   
Sbjct: 298 LSVVVLDLRGNQLTSLPATFCRLVRLEELDLSSNRLSSLPESIGSLVKLKKLSVETN--D 355

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           +E +P++IG   SL EL   YN++  LP+++G ++ L+ LS+  N
Sbjct: 356 IEEIPHTIGQCSSLKELRADYNRLKALPEAVGRIQSLEILSVRYN 400



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 75/161 (46%), Gaps = 49/161 (30%)

Query: 54  ENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL 113
           +  R L   N   +++  LPD+IG +L +L TL ++ N+IV LP ++  L+SL  LD   
Sbjct: 226 KGTRDLNLQNKLMDQIEWLPDSIG-KLSSLMTLDLSENRIVALPATIGGLSSLTKLDLHS 284

Query: 114 NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV------------------ 155
           N +  LP+                          IG L+S+V                  
Sbjct: 285 NRIAELPD-------------------------CIGNLLSVVVLDLRGNQLTSLPATFCR 319

Query: 156 -----ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
                ELD+S N++++LP+SIG L KL+KLS+E N +   P
Sbjct: 320 LVRLEELDLSSNRLSSLPESIGSLVKLKKLSVETNDIEEIP 360


>gi|356531327|ref|XP_003534229.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1-like
           [Glycine max]
          Length = 551

 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 95/242 (39%), Positives = 147/242 (60%), Gaps = 7/242 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P SL  RL+++  LD+ SNQL  LP++IG L  LK+L+V  N +E +P +I  C +L+E
Sbjct: 305 LPASL-GRLVHLEELDLSSNQLSVLPDAIGSLVSLKILNVETNDIEEIPHSIGRCVALKE 363

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L A++N+L+ LP+ +G ++ +L+ LS+  N +  LP +++ L++L+ L+   N L+ +PE
Sbjct: 364 LCADYNRLKALPEAVG-KIESLEVLSVRYNNVKQLPTTMSSLSNLKELNVSFNELEYVPE 422

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L    +L  +NI  NF  + +LP SIG L  L ELD+S N+I  LPDS G L +L+ L 
Sbjct: 423 SLCFATSLVKMNIGNNFADMRSLPRSIGNLEMLEELDISNNQIRVLPDSFGMLTRLRVLK 482

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMN-NDHKS----PKKKSWVGKLVKYGTFNGAL 236
           +E NPL  PP  V E+G  AV  Y+++ +   D KS     KKK W   +  +   N   
Sbjct: 483 VEENPLEIPPRHVAEKGAQAVVKYMADLVEKKDVKSQPLIKKKKGWAHHMCFFSKSNKRK 542

Query: 237 RN 238
           R+
Sbjct: 543 RD 544



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 103/165 (62%), Gaps = 3/165 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           +Q+  LP+SIG LS L  LD+S N +  LP TI +  SL  L+ + NK+ +LP+ +G +L
Sbjct: 231 DQVDWLPDSIGKLSSLIKLDLSENRIMVLPSTIGSLSSLTSLDLHSNKIAELPECVG-DL 289

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
           ++L  L++  N++  LP SL  L  L  LD   N L  LP+ + +L++L++LN+  N   
Sbjct: 290 LSLVYLNVGGNQLSSLPASLGRLVHLEELDLSSNQLSVLPDAIGSLVSLKILNVETN--D 347

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           +E +P+SIG  ++L EL   YN++  LP+++G +  L+ LS+  N
Sbjct: 348 IEEIPHSIGRCVALKELCADYNRLKALPEAVGKIESLEVLSVRYN 392


>gi|326519689|dbj|BAK00217.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 569

 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/226 (40%), Positives = 135/226 (59%), Gaps = 6/226 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P S+  RL N+  LDV +N +  LP+S+G L++LK L V  N L+ LP TI +C SL E
Sbjct: 324 LPSSI-GRLANLEELDVGANHIVALPDSVGSLTRLKKLLVETNDLDELPYTIGHCVSLVE 382

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L A +N L+ LP+ +G +L +L+ LS+  N I  LP ++  LT L+ +DA  N L+S+PE
Sbjct: 383 LQAGYNHLKALPEAVG-KLESLEILSVRYNNIRSLPTTMASLTKLKEVDASFNELESIPE 441

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +   + +L  LN+  NF  +++LP SIG L  L ELD+S N+I  LPDS G L+ L+ L 
Sbjct: 442 NFCFVTSLIKLNVGNNFADMKSLPRSIGNLEMLEELDISNNQIRVLPDSFGMLQHLRVLR 501

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPK----KKSWV 223
            E NPL  PP ++  +G      Y++E        P+    KK+W 
Sbjct: 502 AEENPLQVPPREIALKGAQDAVQYMAEYAAKKTTKPQPVKAKKNWA 547



 Score =  107 bits (266), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 66/170 (38%), Positives = 104/170 (61%), Gaps = 3/170 (1%)

Query: 22  QLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELI 81
           Q++ +P+SIG L+ L  LD+S N L +LP TI    SL +L+ + N++ QLPD++G +L 
Sbjct: 251 QIEWIPDSIGKLTGLVTLDISENRLVALPPTIGKLSSLTKLDLHANRIAQLPDSVG-DLR 309

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           +L  L +  N++  LP S+  L +L  LD   N + +LP+ + +L  L+ L +  N   L
Sbjct: 310 SLICLDLRGNQLTSLPSSIGRLANLEELDVGANHIVALPDSVGSLTRLKKLLVETN--DL 367

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           + LPY+IG  +SLVEL   YN +  LP+++G L  L+ LS+  N + S P
Sbjct: 368 DELPYTIGHCVSLVELQAGYNHLKALPEAVGKLESLEILSVRYNNIRSLP 417


>gi|8698744|gb|AAF78502.1|AC012187_22 Contains similarity to CYR1 from Candida albicans gb|AB034965 and
           contains multiple Leucine Rich PF|00560 repeats
           [Arabidopsis thaliana]
          Length = 492

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/249 (38%), Positives = 137/249 (55%), Gaps = 28/249 (11%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCR------------------ 57
           LD+ SN+L  LP+SIG L  L++L+V+GN L  LP++I  CR                  
Sbjct: 212 LDLSSNRLVFLPDSIGLLLNLRILNVTGNKLTLLPESIAQCRFCAFTFVHLSFQLSLLPN 271

Query: 58  ----------SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
                     SL EL+A+FN L  LP   G+ L+NL+ LSI  NKI   P S+  + SLR
Sbjct: 272 SEERYVLVIRSLVELDASFNNLTSLPANFGYGLLNLERLSIQLNKIRFFPNSICEMRSLR 331

Query: 108 VLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
            LDA +N +  LP  +  L NLEV+N+S NF  L  LP +I  L +L ELD+S N+I  L
Sbjct: 332 YLDAHMNEIHGLPIAIGRLTNLEVMNLSSNFSDLIELPDTISDLANLRELDLSNNQIRVL 391

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
           PDS   L KL+KL+L+ NPL  PP ++V Q   AV+ ++ ++     +  + +S +    
Sbjct: 392 PDSFFRLEKLEKLNLDQNPLEYPPQEMVNQSAEAVREFMRKRWEEMVEEEQLRSVIEAEK 451

Query: 228 KYGTFNGAL 236
           + G   G L
Sbjct: 452 QQGGATGWL 460



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 57/93 (61%), Gaps = 2/93 (2%)

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           ++ + ++ +++ +LP +L  +  L  L+   N L+ LP+ +  L  LE L++S N   L 
Sbjct: 163 VERIDLSDHELKLLPDALGKIVGLVSLNVSRNNLRFLPDTISGLEKLEELDLSSN--RLV 220

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLR 175
            LP SIGLL++L  L+V+ NK+T LP+SI   R
Sbjct: 221 FLPDSIGLLLNLRILNVTGNKLTLLPESIAQCR 253


>gi|356538413|ref|XP_003537698.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Glycine max]
          Length = 567

 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/230 (39%), Positives = 141/230 (61%), Gaps = 9/230 (3%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S + RL+ +  LD+ SNQL  LP++IG L +LK+L+V  N +E LP ++ +C SL 
Sbjct: 319 LLPASFS-RLVRLEELDLSSNQLSALPDTIGSLVRLKILNVETNDIEELPHSVGSCSSLR 377

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL  ++N+L+ LP+ +G ++ +L+ LS+  N I  LP +++ LT+L+ L+   N L+S+P
Sbjct: 378 ELRIDYNRLKALPEAVG-KIQSLEILSVRYNNIKQLPTTMSSLTNLKELNVSFNELESVP 436

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E L    +L  +NI  NF  + +LP SIG L  L ELD+S N+I  LP+S   L +L+ L
Sbjct: 437 ESLCFATSLVKMNIGNNFADMRSLPRSIGNLELLEELDISNNQIRVLPESFRMLTQLRIL 496

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKS-------PKKKSWV 223
             E NPL  PP ++ ++G  AV  Y++E +    K         +KKSW 
Sbjct: 497 RAEENPLEVPPREIADKGAQAVVQYMAELVEKREKKDVKAQPLKQKKSWA 546



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 104/165 (63%), Gaps = 3/165 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           +Q+  LP+SIG LS L  LD+S N + +LP TI    SL  L+ + N++ +LPD++G  L
Sbjct: 246 DQVDWLPDSIGKLSSLVTLDLSENRIVALPATIGGLSSLTRLDLHSNRITELPDSVG-NL 304

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
           ++L  L +  N++ +LP S + L  L  LD   N L +LP+ + +L+ L++LN+  N   
Sbjct: 305 LSLVYLDLRGNQLTLLPASFSRLVRLEELDLSSNQLSALPDTIGSLVRLKILNVETN--D 362

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           +E LP+S+G   SL EL + YN++  LP+++G ++ L+ LS+  N
Sbjct: 363 IEELPHSVGSCSSLRELRIDYNRLKALPEAVGKIQSLEILSVRYN 407


>gi|357484257|ref|XP_003612416.1| Leucine-rich repeat-containing protein [Medicago truncatula]
 gi|355513751|gb|AES95374.1| Leucine-rich repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/229 (41%), Positives = 139/229 (60%), Gaps = 9/229 (3%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P S++ RL+ +  LDV SN +  LP+SIG L  LKVL+V  N +E +P +I NC SL E
Sbjct: 338 LPASVS-RLIRLEELDVSSNLITVLPDSIGSLVSLKVLNVETNDIEEIPYSIGNCSSLRE 396

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+A++NKL+ LP+ +G ++ +L+ LS+  N I  LP +++ L +L+ L+   N L+S+PE
Sbjct: 397 LHADYNKLKALPEALG-KIESLEILSVRYNNIKQLPTTMSTLINLKELNVSFNELESIPE 455

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L    +L  +NI  NF  +  LP SIG L  L E+D+S N+I  LPDS   L  L+ L 
Sbjct: 456 SLCFATSLVKMNIGNNFADMRHLPRSIGNLELLEEMDISNNQIRVLPDSFRMLTNLRVLR 515

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKS-------PKKKSWV 223
           +E NPL  PP ++ E+G  AV  Y++E +    K         +KKSW 
Sbjct: 516 VEENPLEVPPREIAEKGAQAVVQYMAEFVEKRDKKDVKPQPLKQKKSWA 564



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/171 (37%), Positives = 104/171 (60%), Gaps = 3/171 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           +Q+  LP+SIG LS L  LD+S N + ++P TI    SL +L+ + N++ ++PD++G  L
Sbjct: 264 DQVDWLPDSIGKLSSLVTLDLSENRIVAIPSTIGGLSSLTKLDLHSNRITEIPDSVG-NL 322

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
           ++L  L +  N +  LP S++ L  L  LD   N +  LP+ + +L++L+VLN+  N   
Sbjct: 323 LSLVHLYLRGNSLTTLPASVSRLIRLEELDVSSNLITVLPDSIGSLVSLKVLNVETN--D 380

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           +E +PYSIG   SL EL   YNK+  LP+++G +  L+ LS+  N +   P
Sbjct: 381 IEEIPYSIGNCSSLRELHADYNKLKALPEALGKIESLEILSVRYNNIKQLP 431



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 38/66 (57%), Gaps = 1/66 (1%)

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLS 200
           ++ LP SIG L SLV LD+S N+I  +P +IG L  L KL L  N +   P D V   LS
Sbjct: 266 VDWLPDSIGKLSSLVTLDLSENRIVAIPSTIGGLSSLTKLDLHSNRITEIP-DSVGNLLS 324

Query: 201 AVKGYL 206
            V  YL
Sbjct: 325 LVHLYL 330


>gi|224094248|ref|XP_002310108.1| predicted protein [Populus trichocarpa]
 gi|222853011|gb|EEE90558.1| predicted protein [Populus trichocarpa]
          Length = 537

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/220 (42%), Positives = 136/220 (61%), Gaps = 5/220 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL+ +  LD+ SN+L  LP++IG L  LK L+V  N +E +P TI  C SL+EL A++N
Sbjct: 300 GRLVRLQELDLSSNRLSSLPDTIGSLVSLKNLNVETNDIEEIPYTIGKCLSLKELRADYN 359

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP+ +G ++  L+ LS+  N I  LP +++ L SL+ LD   N L+S+PE L   I
Sbjct: 360 RLKALPEAVG-KIETLEVLSVRYNNIKQLPTTMSSLLSLKELDVSFNELESVPESLCFAI 418

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  +NI  NF  +++LP SIG L +L ELD+S N+I  LP S   L +L+ L +E  PL
Sbjct: 419 SLIKMNIGNNFADMQSLPRSIGNLENLEELDISNNQIRVLPGSFRMLTRLRILRVEETPL 478

Query: 188 VSPPMDVVEQGLSAVKGYLSEKMNN-DHKS---PKKKSWV 223
             PP  V E+G  AV  Y++E +   D K+    +KKSW 
Sbjct: 479 EVPPRHVAEKGAQAVVQYMAELVEKRDIKAQPVKQKKSWA 518



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/171 (37%), Positives = 105/171 (61%), Gaps = 3/171 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           +Q+  LP+SIG LS L  LD+S N + +LP TI    SL +L+ + N++ +LP +IG +L
Sbjct: 221 DQVDWLPDSIGKLSSLVTLDLSDNRIVALPDTIGGLSSLTKLDLHANRIGELPGSIG-DL 279

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
           ++L  L +  N++  LP +   L  L+ LD   N L SLP+ + +L++L+ LN+  N   
Sbjct: 280 LSLVVLDVRGNQLSSLPATFGRLVRLQELDLSSNRLSSLPDTIGSLVSLKNLNVETN--D 337

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           +E +PY+IG  +SL EL   YN++  LP+++G +  L+ LS+  N +   P
Sbjct: 338 IEEIPYTIGKCLSLKELRADYNRLKALPEAVGKIETLEVLSVRYNNIKQLP 388


>gi|224081457|ref|XP_002306417.1| predicted protein [Populus trichocarpa]
 gi|222855866|gb|EEE93413.1| predicted protein [Populus trichocarpa]
          Length = 531

 Score =  150 bits (378), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 90/220 (40%), Positives = 131/220 (59%), Gaps = 5/220 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL+ +  LD+ SN+L  LP++IG L  LK L+V  N +E +P TI  C SL+EL A++N
Sbjct: 294 GRLVRLQDLDLSSNRLSSLPDTIGSLVSLKKLNVETNDIEEIPHTIGKCSSLKELRADYN 353

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP+ +G ++  L+ LS+  N I  LP +++ L SL+ LD   N L+S+PE L    
Sbjct: 354 RLKALPEAVG-KIETLEVLSVRYNNIKQLPTTMSSLLSLKELDVSFNELESVPESLCFAT 412

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  +NI  NF  +++LP SIG L +L ELD+S N+I  LPDS   L +L+ L  E NPL
Sbjct: 413 SLVKMNIGNNFADMQSLPRSIGNLENLEELDISNNQIHALPDSFRMLTRLRILRAEENPL 472

Query: 188 VSPPMDVVEQGLSAVKGYLSEKMNND----HKSPKKKSWV 223
             PP  + E+G  A   Y+ E +           +KKSW 
Sbjct: 473 EVPPRHIAEKGAQAAVQYMVELVEKRDVKVQPVKQKKSWA 512



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 105/171 (61%), Gaps = 3/171 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           +Q+  LP+SIG LS L  LD+S N + +LP+TI    SL +L+ + N++ +LP +IG +L
Sbjct: 215 DQVDWLPDSIGKLSSLVTLDLSENRIVALPETIGGLSSLTKLDLHSNRIGELPGSIG-DL 273

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
           ++L  L +  N++  LP +   L  L+ LD   N L SLP+ + +L++L+ LN+  N   
Sbjct: 274 LSLVALDVRGNQLSFLPATFGRLVRLQDLDLSSNRLSSLPDTIGSLVSLKKLNVETN--D 331

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           +E +P++IG   SL EL   YN++  LP+++G +  L+ LS+  N +   P
Sbjct: 332 IEEIPHTIGKCSSLKELRADYNRLKALPEAVGKIETLEVLSVRYNNIKQLP 382


>gi|20148766|gb|AAM10777.1| PSR9 [Brassica nigra]
          Length = 535

 Score =  150 bits (378), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 93/226 (41%), Positives = 135/226 (59%), Gaps = 6/226 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P S + RLL +  L++  N L  LP S+G L+ LK LDV  N +E +P +I  C SL+E
Sbjct: 302 LPSSFS-RLLQLEELNLSCNNLPVLPESVGSLANLKKLDVETNDIEEIPYSIGGCSSLKE 360

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L A++NKL+ LP+ IG ++  L+ LS+  N I  LP +++ L SLR LD   N L+S+PE
Sbjct: 361 LRADYNKLKALPEAIG-KITTLEILSVRYNNIRQLPTTMSSLASLRELDVSFNELESVPE 419

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L    +L  LN+  NF  + +LP S+G L  L ELD+S N+I  LP+S   L KL+  +
Sbjct: 420 SLCFATSLVKLNVGNNFADMISLPRSLGNLEMLEELDISNNQIRVLPESFRSLTKLRVFA 479

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSP----KKKSWV 223
            + NPL  PP D+ E+G  AV  Y+++ +   +        KKSWV
Sbjct: 480 SQENPLQVPPRDIAEKGPQAVVQYMNDLVETRNAKSLVVKPKKSWV 525



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/166 (42%), Positives = 100/166 (60%), Gaps = 3/166 (1%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           S Q++ LP+SIG LS L  LD+S N +  LP TI    SL  L+   N++ QLP++IG E
Sbjct: 227 SAQVEWLPDSIGKLSTLTSLDLSENNIVVLPNTIGGLVSLTNLDLRSNRINQLPESIG-E 285

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L+NL  L ++ N++  LP S + L  L  L+   N L  LPE + +L NL+ L++  N  
Sbjct: 286 LLNLVYLDLSSNQLSSLPSSFSRLLQLEELNLSCNNLPVLPESVGSLANLKKLDVETN-- 343

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            +E +PYSIG   SL EL   YNK+  LP++IG +  L+ LS+  N
Sbjct: 344 DIEEIPYSIGGCSSLKELRADYNKLKALPEAIGKITTLEILSVRYN 389


>gi|297802402|ref|XP_002869085.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297314921|gb|EFH45344.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  149 bits (377), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 94/223 (42%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 5   SLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNA 64
           S  +RL+ +  LD+  N L  LP SIG L  LK LDV  N +E +P +I  C SL+EL A
Sbjct: 310 SAFSRLVRLEELDLSCNNLPILPESIGSLVSLKKLDVETNDIEEIPYSIGGCSSLKELRA 369

Query: 65  NFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLE 124
           ++NKL+ LP+ IG ++  L+ LS+  N I  LP +++ L +L+ LD   N L+S+PE L 
Sbjct: 370 DYNKLKALPEAIG-KITTLEILSVRYNNIRQLPTTMSSLANLKELDVSFNELESVPESLC 428

Query: 125 NLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEG 184
               L  LNI  NF  + +LP SIG L  L ELD+S N+I  LPDS   L KL+    + 
Sbjct: 429 FATTLVKLNIGNNFADMISLPRSIGNLEMLEELDISNNQIRVLPDSFKMLTKLRVFRAQE 488

Query: 185 NPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSP----KKKSWV 223
           NPL  PP D+ E+G  AV  Y+++ +   +        KKSWV
Sbjct: 489 NPLQVPPRDIAEKGPQAVVQYMNDLVETRNAKSLMVKPKKSWV 531



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/166 (40%), Positives = 105/166 (63%), Gaps = 3/166 (1%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           ++Q++ LP+S+G LS L  LD+S N +  LP TI    SL +L+ + N++ QLP++IG E
Sbjct: 233 TDQVEWLPDSLGKLSSLTSLDLSENHIVVLPNTIGGLSSLTKLDLHSNRIGQLPESIG-E 291

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L+NL  L++  N++ +LP + + L  L  LD   N L  LPE + +L++L+ L++  N  
Sbjct: 292 LLNLVYLNLGSNQLSLLPSAFSRLVRLEELDLSCNNLPILPESIGSLVSLKKLDVETN-- 349

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            +E +PYSIG   SL EL   YNK+  LP++IG +  L+ LS+  N
Sbjct: 350 DIEEIPYSIGGCSSLKELRADYNKLKALPEAIGKITTLEILSVRYN 395


>gi|15237011|ref|NP_195272.1| plant intracellular ras group-related LRR 4 [Arabidopsis thaliana]
 gi|5830789|emb|CAB54875.1| putative protein [Arabidopsis thaliana]
 gi|7270498|emb|CAB80263.1| putative protein [Arabidopsis thaliana]
 gi|18252197|gb|AAL61931.1| putative protein [Arabidopsis thaliana]
 gi|22136104|gb|AAM91130.1| putative protein [Arabidopsis thaliana]
 gi|57868150|gb|AAW57413.1| plant intracellular Ras-group-related LRR protein 4 [Arabidopsis
           thaliana]
 gi|332661119|gb|AEE86519.1| plant intracellular ras group-related LRR 4 [Arabidopsis thaliana]
          Length = 549

 Score =  149 bits (377), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/223 (42%), Positives = 129/223 (57%), Gaps = 5/223 (2%)

Query: 5   SLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNA 64
           S  +RL+ +  LD+  N L  LP SIG L  LK LDV  N +E +P +I  C SL EL A
Sbjct: 309 SAFSRLVRLEELDLSCNNLPILPESIGSLVSLKKLDVETNDIEEIPYSIGGCSSLIELRA 368

Query: 65  NFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLE 124
           ++NKL+ LP+ IG ++  L+ LS+  N I  LP +++ L SL+ LD   N L+S+PE L 
Sbjct: 369 DYNKLKALPEAIG-KITTLEILSVRYNNIRQLPTTMSSLASLKELDVSFNELESVPESLC 427

Query: 125 NLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEG 184
               L  LNI  NF  + +LP SIG L  L ELD+S N+I  LPDS   L KL+    + 
Sbjct: 428 FATTLVKLNIGNNFADMVSLPRSIGNLEMLEELDISNNQIRVLPDSFKMLTKLRVFRAQE 487

Query: 185 NPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSP----KKKSWV 223
           NPL  PP D+ E+G  AV  Y+++ +   +        KKSWV
Sbjct: 488 NPLHIPPRDIAEKGPQAVVQYMNDLVETRNAKSLMVKPKKSWV 530



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/166 (40%), Positives = 104/166 (62%), Gaps = 3/166 (1%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           + QL+ LP+S+G LS L  LD+S N +  LP TI    SL +L+ + N++ QLP++IG E
Sbjct: 232 TEQLEWLPDSLGKLSSLTSLDLSENHIVVLPNTIGGLSSLTKLDLHSNRIGQLPESIG-E 290

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L+NL  L++  N++  LP + + L  L  LD   N L  LPE + +L++L+ L++  N  
Sbjct: 291 LLNLVYLNLGSNQLSSLPSAFSRLVRLEELDLSCNNLPILPESIGSLVSLKKLDVETN-- 348

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            +E +PYSIG   SL+EL   YNK+  LP++IG +  L+ LS+  N
Sbjct: 349 DIEEIPYSIGGCSSLIELRADYNKLKALPEAIGKITTLEILSVRYN 394


>gi|356561015|ref|XP_003548781.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1-like
           [Glycine max]
          Length = 548

 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/242 (38%), Positives = 142/242 (58%), Gaps = 7/242 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P SL  RL+++  LD+ SNQL  LP++IG L  LKVL+V  N +E +P +I  C +L E
Sbjct: 302 LPASL-GRLVHLEELDLSSNQLSVLPDAIGSLVSLKVLNVETNDIEEIPHSIGRCVALRE 360

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L A++N+L+ LP+ +G ++ +L+ LS+  N +  LP +++ L++L+ L+   N L+ +PE
Sbjct: 361 LCADYNRLKALPEAVG-KIESLEVLSVRYNNVKQLPTTMSSLSNLKELNVSFNELEYVPE 419

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L    +L  +NI  NF  + +LP SIG L  L ELD+S N+I  LPDS   L +L+ L 
Sbjct: 420 SLCFATSLVKMNIGNNFADMRSLPRSIGNLEMLEELDISNNQIRVLPDSFRMLTRLRVLK 479

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKS-----PKKKSWVGKLVKYGTFNGAL 236
           +E NPL  PP  V E+G  AV  Y+++ +            KKK W   +  +   N   
Sbjct: 480 VEENPLEIPPRHVAEKGAQAVVRYMADLVEKKDAKLQPLIKKKKGWAHHMCFFSKSNKRK 539

Query: 237 RN 238
           R+
Sbjct: 540 RD 541



 Score =  103 bits (258), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 102/165 (61%), Gaps = 3/165 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           +Q+  LP+SIG LS L  LD+S N +  LP TI    SL  LN + NK+ +LP+ +G +L
Sbjct: 228 DQVDWLPDSIGKLSSLIKLDLSENRITVLPSTIGGLSSLTSLNLHSNKIAELPECVG-DL 286

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
           ++L  L++  N++  LP SL  L  L  LD   N L  LP+ + +L++L+VLN+  N   
Sbjct: 287 LSLVYLNVGGNQLSSLPASLGRLVHLEELDLSSNQLSVLPDAIGSLVSLKVLNVETN--D 344

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           +E +P+SIG  ++L EL   YN++  LP+++G +  L+ LS+  N
Sbjct: 345 IEEIPHSIGRCVALRELCADYNRLKALPEAVGKIESLEVLSVRYN 389


>gi|357517589|ref|XP_003629083.1| Leucine-rich repeat-containing protein [Medicago truncatula]
 gi|355523105|gb|AET03559.1| Leucine-rich repeat-containing protein [Medicago truncatula]
          Length = 573

 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/241 (39%), Positives = 147/241 (60%), Gaps = 7/241 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P SL+ +L  +  L+++SNQL  LP+SIG L  LK+L++  N +E +P +I +C SL+E
Sbjct: 327 LPHSLS-KLARLEKLNLNSNQLSLLPDSIGSLVNLKILNIETNDIEEIPHSIGHCCSLKE 385

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L A++N+L+ LP+ +G ++ +L+ LS+  N I  LP ++++L +L+ LD   N L+ +PE
Sbjct: 386 LCADYNRLKALPEAVG-QIRSLEILSVRYNNIKQLPTTMSNLINLKELDVSFNELEFVPE 444

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L     +  +N+  NF  + +LP SIG L  L ELD+S N+I  LP S   L +LQ L 
Sbjct: 445 SLCFATKIVKMNVGNNFADMRSLPRSIGNLEMLEELDISNNQIHALPYSFRMLTRLQVLR 504

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMN-NDHKS----PKKKSWVGKLVKYGTFNGAL 236
           +E NPL  PP  VVE+G  AV  Y++E +   D KS     +KKSW  ++  +   N   
Sbjct: 505 VEENPLEVPPRHVVEKGAQAVVHYMAELVEKGDVKSQPLIKQKKSWTDQICFFSKSNTRK 564

Query: 237 R 237
           R
Sbjct: 565 R 565



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/171 (40%), Positives = 106/171 (61%), Gaps = 3/171 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           +Q+  LP+S+G LS L  LD+S N + +LP TI N  SL  L+ + N++ QLPD+I   L
Sbjct: 253 DQVDWLPDSLGKLSTLLTLDLSQNRIITLPFTIGNLSSLTYLDLHSNQITQLPDSIE-NL 311

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
           INL  L+++ N +  LP SL+ L  L  L+   N L  LP+ + +L+NL++LNI  N   
Sbjct: 312 INLTHLNVSANMLSSLPHSLSKLARLEKLNLNSNQLSLLPDSIGSLVNLKILNIETN--D 369

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           +E +P+SIG   SL EL   YN++  LP+++G +R L+ LS+  N +   P
Sbjct: 370 IEEIPHSIGHCCSLKELCADYNRLKALPEAVGQIRSLEILSVRYNNIKQLP 420



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/132 (40%), Positives = 84/132 (63%), Gaps = 7/132 (5%)

Query: 67  NKLRQ----LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED 122
           NKL+     LPD++G +L  L TL ++ N+I+ LP ++ +L+SL  LD   N +  LP+ 
Sbjct: 249 NKLKDQVDWLPDSLG-KLSTLLTLDLSQNRIITLPFTIGNLSSLTYLDLHSNQITQLPDS 307

Query: 123 LENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           +ENLINL  LN+S N   L +LP+S+  L  L +L+++ N+++ LPDSIG L  L+ L++
Sbjct: 308 IENLINLTHLNVSANM--LSSLPHSLSKLARLEKLNLNSNQLSLLPDSIGSLVNLKILNI 365

Query: 183 EGNPLVSPPMDV 194
           E N +   P  +
Sbjct: 366 ETNDIEEIPHSI 377


>gi|15227838|ref|NP_179336.1| ras group-related LRR 5 protein [Arabidopsis thaliana]
 gi|57868152|gb|AAW57414.1| plant intracellular Ras-group-related LRR protein 5 [Arabidopsis
           thaliana]
 gi|110737388|dbj|BAF00638.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251531|gb|AEC06625.1| ras group-related LRR 5 protein [Arabidopsis thaliana]
          Length = 526

 Score =  146 bits (369), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 90/222 (40%), Positives = 129/222 (58%), Gaps = 5/222 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RL+++  LD+ SN L  LP SIG L  LK LDV  N +E +P +I  C S+EEL A++N+
Sbjct: 297 RLIHLEELDLSSNSLSILPESIGSLVSLKKLDVETNNIEEIPHSISGCSSMEELRADYNR 356

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L+ LP+ +G +L  L+ L++  N I  LP +++ + +L+ LD   N L+S+PE L     
Sbjct: 357 LKALPEAVG-KLSTLEILTVRYNNIRQLPTTMSSMANLKELDVSFNELESVPESLCYAKT 415

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L  LNI  NF  L +LP  IG L  L ELD+S N+I  LP S   L  L+ L  E NPL 
Sbjct: 416 LVKLNIGNNFANLRSLPGLIGNLEKLEELDMSNNQIRFLPYSFKTLSNLRVLQTEQNPLE 475

Query: 189 SPPMDVVEQGLSAVKGYLSE----KMNNDHKSPKKKSWVGKL 226
             P D+ E+G  AV  Y+++    +     ++  KKSWV  +
Sbjct: 476 ELPRDITEKGAQAVVQYMNDLVEARNTKSQRTKPKKSWVNSI 517



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/141 (38%), Positives = 84/141 (59%), Gaps = 6/141 (4%)

Query: 57  RSLEELNAN---FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL 113
           ++ +ELN      ++L  LPD++G +L +L  L ++ N I++LP ++  L SL  LD   
Sbjct: 204 KATQELNLQHRLMDQLEWLPDSLG-KLSSLVRLDLSENCIMVLPATIGGLISLTRLDLHS 262

Query: 114 NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGC 173
           N +  LPE + +L+NL  LN+S N   L +LP S   L+ L ELD+S N ++ LP+SIG 
Sbjct: 263 NRIGQLPESIGDLLNLVNLNLSGN--QLSSLPSSFNRLIHLEELDLSSNSLSILPESIGS 320

Query: 174 LRKLQKLSLEGNPLVSPPMDV 194
           L  L+KL +E N +   P  +
Sbjct: 321 LVSLKKLDVETNNIEEIPHSI 341


>gi|449434074|ref|XP_004134821.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Cucumis
           sativus]
 gi|449524314|ref|XP_004169168.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Cucumis
           sativus]
          Length = 574

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/241 (38%), Positives = 135/241 (56%), Gaps = 12/241 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L+++  LD+ SN L  LP SIG L KL+ L++  N +E +P TI  C SL EL A++N
Sbjct: 334 GKLIHLEELDLSSNMLTSLPESIGNLVKLRKLNLETNNIEEIPHTIGRCASLRELTADYN 393

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP+ +G ++  L+ LS+  N I  LP ++  L +LR LD   N L+S+PE L    
Sbjct: 394 RLKALPEAVG-KIETLEILSVRYNNIKQLPTTMASLANLRELDVSFNELESVPESLCFAT 452

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  +NI  NF  L++LP SIG L  L EL++S N+I  LPDS   L +L+ L  E NP 
Sbjct: 453 NLVKMNIGNNFADLQSLPKSIGNLEMLEELNISNNQIRFLPDSFRMLTRLRVLRAEENPF 512

Query: 188 VSPPMDVVEQGLSAVKGYLSE--KMNNDHKSP---KKKSWVGKLVKYGTFNGALRNHRSE 242
             PP  + E+G  AV  Y+ +  +  N    P   +K+ W      +  FN    N R  
Sbjct: 513 EVPPRHIFEKGAQAVVQYMIDLHENRNVRTEPVKRRKRRW------WHMFNSCNSNQRQS 566

Query: 243 E 243
           +
Sbjct: 567 D 567



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 97/165 (58%), Gaps = 3/165 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           NQ++ LP SIG L+ L  LD+S N L +LP+ I     LE+L+ + NKL +LP +   +L
Sbjct: 255 NQVEWLPESIGKLTNLVSLDLSENRLATLPEAIGALSQLEKLDLHANKLSELPSSFT-DL 313

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            +L  L +  N++V LP S   L  L  LD   N L SLPE + NL+ L  LN+  N   
Sbjct: 314 ASLVYLDLRGNQLVSLPVSFGKLIHLEELDLSSNMLTSLPESIGNLVKLRKLNLETN--N 371

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           +E +P++IG   SL EL   YN++  LP+++G +  L+ LS+  N
Sbjct: 372 IEEIPHTIGRCASLRELTADYNRLKALPEAVGKIETLEILSVRYN 416



 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/104 (40%), Positives = 58/104 (55%), Gaps = 2/104 (1%)

Query: 91  NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL 150
           N++  LP+S+  LT+L  LD   N L +LPE +  L  LE L++  N   L  LP S   
Sbjct: 255 NQVEWLPESIGKLTNLVSLDLSENRLATLPEAIGALSQLEKLDLHAN--KLSELPSSFTD 312

Query: 151 LMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L SLV LD+  N++ +LP S G L  L++L L  N L S P  +
Sbjct: 313 LASLVYLDLRGNQLVSLPVSFGKLIHLEELDLSSNMLTSLPESI 356



 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 5/88 (5%)

Query: 108 VLDAR---LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
            LD R   +N ++ LPE +  L NL  L++S+N   L TLP +IG L  L +LD+  NK+
Sbjct: 246 ALDLRNKLMNQVEWLPESIGKLTNLVSLDLSEN--RLATLPEAIGALSQLEKLDLHANKL 303

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
           + LP S   L  L  L L GN LVS P+
Sbjct: 304 SELPSSFTDLASLVYLDLRGNQLVSLPV 331


>gi|125533033|gb|EAY79598.1| hypothetical protein OsI_34739 [Oryza sativa Indica Group]
          Length = 543

 Score =  143 bits (360), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 94/256 (36%), Positives = 141/256 (55%), Gaps = 29/256 (11%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLL--------------- 46
           +P++    L N++ LD+H+NQLK LP+S G L+ L  LD+S N+L               
Sbjct: 278 LPDAF-GELSNLIDLDLHANQLKSLPSSFGNLTSLANLDLSSNMLKALPDCLGKLANLRR 336

Query: 47  --------ESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ 98
                   E LP TI +C SL EL  +FN+L+ LP+ IG +L  L+ L+++ N+I  LP 
Sbjct: 337 LIVETNELEELPYTIGSCTSLVELRLDFNQLKALPEAIG-KLEKLEILTLHYNRIKGLPT 395

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
           ++  L+ LR LD   N ++ +PE++    +L  LN+S+NF  L  LP SIG L  L ELD
Sbjct: 396 TVGSLSRLRELDVSFNEVEVIPENICFATSLVKLNLSRNFADLRALPKSIGNLEMLEELD 455

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSE----KMNNDH 214
           +S N+I  LPDS  CL +L+    +  PL  PP +VV+ G  AV  Y+++    +  N  
Sbjct: 456 ISSNQIRVLPDSFRCLSRLRVFHADETPLEFPPREVVKLGAQAVVKYMNDLNAARGTNQK 515

Query: 215 KSPKKKSWVGKLVKYG 230
           K+ +   W      +G
Sbjct: 516 KTDRGSFWTWLFSLFG 531



 Score =  110 bits (276), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 105/174 (60%), Gaps = 3/174 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           +Q++ LP S+G L  +  LD+S N + +LP TI + R L +L+ + N+L  LPD  G EL
Sbjct: 227 DQIEWLPVSLGKLQDVTELDLSENRIMALPSTIGSLRYLTKLDLHSNQLINLPDAFG-EL 285

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            NL  L ++ N++  LP S  +LTSL  LD   N LK+LP+ L  L NL  L +  N   
Sbjct: 286 SNLIDLDLHANQLKSLPSSFGNLTSLANLDLSSNMLKALPDCLGKLANLRRLIVETN--E 343

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           LE LPY+IG   SLVEL + +N++  LP++IG L KL+ L+L  N +   P  V
Sbjct: 344 LEELPYTIGSCTSLVELRLDFNQLKALPEAIGKLEKLEILTLHYNRIKGLPTTV 397


>gi|19225010|gb|AAL86486.1|AC077693_25 putative leucine-rich repeat protein [Oryza sativa Japonica Group]
 gi|31433621|gb|AAP55113.1| Leucine Rich Repeat family protein, expressed [Oryza sativa
           Japonica Group]
 gi|78709035|gb|ABB48010.1| Leucine Rich Repeat family protein, expressed [Oryza sativa
           Japonica Group]
 gi|125575769|gb|EAZ17053.1| hypothetical protein OsJ_32547 [Oryza sativa Japonica Group]
 gi|215734963|dbj|BAG95685.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 543

 Score =  143 bits (360), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/256 (36%), Positives = 141/256 (55%), Gaps = 29/256 (11%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLL--------------- 46
           +P++    L N++ LD+H+NQLK LP+S G L+ L  LD+S N+L               
Sbjct: 278 LPDAF-GELSNLIDLDLHANQLKSLPSSFGNLTSLANLDLSSNMLKALPDCLGKLANLRR 336

Query: 47  --------ESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ 98
                   E LP TI +C SL EL  +FN+L+ LP+ IG +L  L+ L+++ N+I  LP 
Sbjct: 337 LIVETNELEELPYTIGSCTSLVELRLDFNQLKALPEAIG-KLEKLEILTLHYNRIKGLPT 395

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
           ++  L+ LR LD   N ++ +PE++    +L  LN+S+NF  L  LP SIG L  L ELD
Sbjct: 396 TVGSLSRLRELDVSFNEVEVIPENICFATSLVKLNLSRNFADLRALPKSIGNLEMLEELD 455

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSE----KMNNDH 214
           +S N+I  LPDS  CL +L+    +  PL  PP +VV+ G  AV  Y+++    +  N  
Sbjct: 456 ISSNQIRVLPDSFRCLSRLRVFHADETPLEFPPREVVKLGAQAVVKYMNDLNAARGTNQK 515

Query: 215 KSPKKKSWVGKLVKYG 230
           K+ +   W      +G
Sbjct: 516 KTDRGSFWTWLFSLFG 531



 Score =  110 bits (276), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 105/174 (60%), Gaps = 3/174 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           +Q++ LP S+G L  +  LD+S N + +LP TI + R L +L+ + N+L  LPD  G EL
Sbjct: 227 DQIEWLPVSLGKLQDVTELDLSENRIMALPSTIGSLRYLTKLDLHSNQLINLPDAFG-EL 285

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            NL  L ++ N++  LP S  +LTSL  LD   N LK+LP+ L  L NL  L +  N   
Sbjct: 286 SNLIDLDLHANQLKSLPSSFGNLTSLANLDLSSNMLKALPDCLGKLANLRRLIVETN--E 343

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           LE LPY+IG   SLVEL + +N++  LP++IG L KL+ L+L  N +   P  V
Sbjct: 344 LEELPYTIGSCTSLVELRLDFNQLKALPEAIGKLEKLEILTLHYNRIKGLPTTV 397


>gi|242040121|ref|XP_002467455.1| hypothetical protein SORBIDRAFT_01g028430 [Sorghum bicolor]
 gi|241921309|gb|EER94453.1| hypothetical protein SORBIDRAFT_01g028430 [Sorghum bicolor]
          Length = 538

 Score =  143 bits (360), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/219 (40%), Positives = 131/219 (59%), Gaps = 5/219 (2%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+ SN LK LP+ +G L  L+ L    N LE LP TI +C SL EL  +FN+L+ LP+ 
Sbjct: 308 LDLSSNLLKVLPDCLGKLKNLRRLIAETNELEELPYTIGSCTSLVELRLDFNQLKALPEA 367

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL+ L+++ N+I  LP ++ HLT LR LD   N ++++PE++    +L  LN+S
Sbjct: 368 IG-KLENLEILTLHYNRIKGLPTTIGHLTRLRELDVSFNEVETIPENICFAASLVKLNVS 426

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
           +NF  L  LP SIG L  L ELD+S N+I  LPDS G L KL+    +  PL  PP +VV
Sbjct: 427 RNFADLRALPKSIGELEMLEELDISSNQIRVLPDSFGHLSKLRVFHADETPLEVPPKEVV 486

Query: 196 EQGLSAVKGYL----SEKMNNDHKSPKKKSWVGKLVKYG 230
           + G   +  Y+    + +  + +++ K+  W   +  +G
Sbjct: 487 KLGAQELVNYMKNMVAAREVSQNQTNKRSFWTWFVSLFG 525



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/174 (41%), Positives = 101/174 (58%), Gaps = 3/174 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           +Q++ LP S+G L  +  LD+S N + +LP TI + R L +L+ + N+L  LPDT G EL
Sbjct: 221 DQVEWLPVSLGKLQDVTELDLSENRIMALPSTIGSLRYLTKLDLHSNQLINLPDTFG-EL 279

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
             L  L +  N++  LP S  +LTSL  LD   N LK LP+ L  L NL  L    N   
Sbjct: 280 SCLIDLDLRANQLKSLPTSFGNLTSLANLDLSSNLLKVLPDCLGKLKNLRRLIAETN--E 337

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           LE LPY+IG   SLVEL + +N++  LP++IG L  L+ L+L  N +   P  +
Sbjct: 338 LEELPYTIGSCTSLVELRLDFNQLKALPEAIGKLENLEILTLHYNRIKGLPTTI 391



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/139 (40%), Positives = 87/139 (62%), Gaps = 4/139 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE++  +L N+ +L +H N++K LP +IG L++L+ LDVS N +E++P+ I    SL +
Sbjct: 364 LPEAI-GKLENLEILTLHYNRIKGLPTTIGHLTRLRELDVSFNEVETIPENICFAASLVK 422

Query: 62  LNA--NFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
           LN   NF  LR LP +IG EL  L+ L I+ N+I +LP S  HL+ LRV  A    L+  
Sbjct: 423 LNVSRNFADLRALPKSIG-ELEMLEELDISSNQIRVLPDSFGHLSKLRVFHADETPLEVP 481

Query: 120 PEDLENLINLEVLNISQNF 138
           P+++  L   E++N  +N 
Sbjct: 482 PKEVVKLGAQELVNYMKNM 500


>gi|226531494|ref|NP_001147848.1| LOC100281458 [Zea mays]
 gi|195614118|gb|ACG28889.1| protein lap4 [Zea mays]
          Length = 532

 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/197 (43%), Positives = 123/197 (62%), Gaps = 1/197 (0%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L+++  LD+ SN LK LP+ +G L  L+ L    N +E LP TI +C SL EL  +FN+L
Sbjct: 297 LISLANLDLSSNLLKVLPDCLGKLKNLRRLIAETNEIEELPYTIGSCTSLVELRLDFNQL 356

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           + LP+ IG +L NL+ L+++ N+I  LP ++ HLT LR LD   N ++++PE++    +L
Sbjct: 357 KALPEAIG-KLENLEILTLHYNRIKGLPTTIGHLTRLRELDVSFNEVETIPENICFAASL 415

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
             LN+S+NF  L  LP SIG L  L ELD+S N+I  LPDS G L KL+    +  PL  
Sbjct: 416 VKLNVSRNFADLRALPKSIGELEMLEELDISSNQIRVLPDSFGHLSKLRVFHADETPLEV 475

Query: 190 PPMDVVEQGLSAVKGYL 206
           PP +VV+ G   +  Y+
Sbjct: 476 PPKEVVKLGAQELVNYM 492



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 101/174 (58%), Gaps = 3/174 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           +Q++ LP S+G L  +  LD+S N + +LP TI + R L +L+ + N+L  LPDT G EL
Sbjct: 216 DQVEWLPVSLGKLQDVTELDLSENRIMALPSTIGSLRYLTKLDLHSNQLINLPDTFG-EL 274

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            +L  L +  N++  LP S  +L SL  LD   N LK LP+ L  L NL  L    N   
Sbjct: 275 SSLIDLDLRANQLKSLPTSFGNLISLANLDLSSNLLKVLPDCLGKLKNLRRLIAETN--E 332

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +E LPY+IG   SLVEL + +N++  LP++IG L  L+ L+L  N +   P  +
Sbjct: 333 IEELPYTIGSCTSLVELRLDFNQLKALPEAIGKLENLEILTLHYNRIKGLPTTI 386



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/139 (40%), Positives = 87/139 (62%), Gaps = 4/139 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE++  +L N+ +L +H N++K LP +IG L++L+ LDVS N +E++P+ I    SL +
Sbjct: 359 LPEAI-GKLENLEILTLHYNRIKGLPTTIGHLTRLRELDVSFNEVETIPENICFAASLVK 417

Query: 62  LNA--NFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
           LN   NF  LR LP +IG EL  L+ L I+ N+I +LP S  HL+ LRV  A    L+  
Sbjct: 418 LNVSRNFADLRALPKSIG-ELEMLEELDISSNQIRVLPDSFGHLSKLRVFHADETPLEVP 476

Query: 120 PEDLENLINLEVLNISQNF 138
           P+++  L   E++N  +N 
Sbjct: 477 PKEVVKLGAQELVNYMKNM 495


>gi|297610977|ref|NP_001065462.2| Os10g0572300 [Oryza sativa Japonica Group]
 gi|255679659|dbj|BAF27299.2| Os10g0572300 [Oryza sativa Japonica Group]
          Length = 396

 Score =  141 bits (356), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/256 (36%), Positives = 141/256 (55%), Gaps = 29/256 (11%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLL--------------- 46
           +P++    L N++ LD+H+NQLK LP+S G L+ L  LD+S N+L               
Sbjct: 131 LPDAF-GELSNLIDLDLHANQLKSLPSSFGNLTSLANLDLSSNMLKALPDCLGKLANLRR 189

Query: 47  --------ESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ 98
                   E LP TI +C SL EL  +FN+L+ LP+ IG +L  L+ L+++ N+I  LP 
Sbjct: 190 LIVETNELEELPYTIGSCTSLVELRLDFNQLKALPEAIG-KLEKLEILTLHYNRIKGLPT 248

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
           ++  L+ LR LD   N ++ +PE++    +L  LN+S+NF  L  LP SIG L  L ELD
Sbjct: 249 TVGSLSRLRELDVSFNEVEVIPENICFATSLVKLNLSRNFADLRALPKSIGNLEMLEELD 308

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSE----KMNNDH 214
           +S N+I  LPDS  CL +L+    +  PL  PP +VV+ G  AV  Y+++    +  N  
Sbjct: 309 ISSNQIRVLPDSFRCLSRLRVFHADETPLEFPPREVVKLGAQAVVKYMNDLNAARGTNQK 368

Query: 215 KSPKKKSWVGKLVKYG 230
           K+ +   W      +G
Sbjct: 369 KTDRGSFWTWLFSLFG 384



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 105/174 (60%), Gaps = 3/174 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           +Q++ LP S+G L  +  LD+S N + +LP TI + R L +L+ + N+L  LPD  G EL
Sbjct: 80  DQIEWLPVSLGKLQDVTELDLSENRIMALPSTIGSLRYLTKLDLHSNQLINLPDAFG-EL 138

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            NL  L ++ N++  LP S  +LTSL  LD   N LK+LP+ L  L NL  L +  N   
Sbjct: 139 SNLIDLDLHANQLKSLPSSFGNLTSLANLDLSSNMLKALPDCLGKLANLRRLIVETN--E 196

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           LE LPY+IG   SLVEL + +N++  LP++IG L KL+ L+L  N +   P  V
Sbjct: 197 LEELPYTIGSCTSLVELRLDFNQLKALPEAIGKLEKLEILTLHYNRIKGLPTTV 250


>gi|224138080|ref|XP_002326513.1| predicted protein [Populus trichocarpa]
 gi|222833835|gb|EEE72312.1| predicted protein [Populus trichocarpa]
          Length = 526

 Score =  139 bits (351), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/196 (42%), Positives = 123/196 (62%), Gaps = 1/196 (0%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+ SNQ   LP ++G L+ LK+L+V  N LE +P TI +C SL EL  +FN+LR LP+ 
Sbjct: 301 LDLSSNQFTQLPETVGSLTSLKILNVDTNELEEVPYTIGSCTSLVELRLDFNELRALPEA 360

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L  L+ L+++ N+I  LP ++ HL++LR LD   N L+S+PE+L    NL+ LN++
Sbjct: 361 IG-KLDCLEILALHYNRIRGLPTTMGHLSNLRELDVSFNELESIPENLCFAENLKKLNVA 419

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            NF  L + P +IG L  L ELD+S ++I  LPDS   L KL+    +  PL  PP  V 
Sbjct: 420 NNFADLRSSPRNIGNLELLEELDISDDQIRVLPDSFRLLSKLRVFRADETPLEIPPRQVT 479

Query: 196 EQGLSAVKGYLSEKMN 211
             G  AV  ++++ +N
Sbjct: 480 ILGAQAVVQFMADLVN 495



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/198 (38%), Positives = 113/198 (57%), Gaps = 15/198 (7%)

Query: 13  VVVLDVHS---NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
            VVLD+     +Q++ LP SIG L  +  LD+S N + +LP TI   ++L +L+ + N+L
Sbjct: 203 AVVLDLRGKLMDQIEWLPLSIGKLLFITELDLSENRIMALPSTINGLKALTKLDVHSNQL 262

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP + G ELINL  L +  N++  LP S   LT L  LD   N    LPE + +L +L
Sbjct: 263 INLPGSFG-ELINLTDLDLRANRLRSLPASFVKLTKLENLDLSSNQFTQLPETVGSLTSL 321

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           ++LN+  N   LE +PY+IG   SLVEL + +N++  LP++IG L  L+ L+L  N +  
Sbjct: 322 KILNVDTN--ELEEVPYTIGSCTSLVELRLDFNELRALPEAIGKLDCLEILALHYNRI-- 377

Query: 190 PPMDVVEQGLSAVKGYLS 207
                  +GL    G+LS
Sbjct: 378 -------RGLPTTMGHLS 388


>gi|297832352|ref|XP_002884058.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329898|gb|EFH60317.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 532

 Score =  139 bits (351), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/226 (40%), Positives = 130/226 (57%), Gaps = 5/226 (2%)

Query: 5   SLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNA 64
           S  +RL+++  LD+ SN L  LP  IG L  LK LDV  N +E +P +I  C  L+EL A
Sbjct: 299 SAFSRLIHLEELDLSSNSLTILPEYIGSLVSLKKLDVETNNIEEIPHSISGCSFLKELRA 358

Query: 65  NFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLE 124
           ++N+L+ LP+ +G +L  L+ L++  N I  LP +++ + +L+ LD   N L+S+PE L 
Sbjct: 359 DYNRLKALPEAVG-KLSTLEILTVRYNNIRQLPTTMSSMANLKELDVSFNELESVPESLC 417

Query: 125 NLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEG 184
               L  LNI  NF  L +LP  IG L  L ELD+S N+I  LP S   L +L+ L  E 
Sbjct: 418 YAKTLVKLNIGNNFANLRSLPGLIGNLEKLEELDMSNNQIRFLPYSFKTLSQLRVLHTEQ 477

Query: 185 NPLVSPPMDVVEQGLSAVKGYLS---EKMNNDHKSPK-KKSWVGKL 226
           NPL   P D+ ++G  AV  Y++   E  N   +  K KKSWV  +
Sbjct: 478 NPLEELPRDITQKGAQAVVQYMNDLVEARNTKSQGTKPKKSWVNSI 523



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 76/129 (58%), Gaps = 3/129 (2%)

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
            ++L  LP+++G +L +L  L ++ N I++LP ++  L SL  LD   N +  LPE + +
Sbjct: 222 MDQLEWLPESLG-KLSSLVRLDLSENCIMVLPATIGGLLSLTRLDLHSNRIGQLPESIGD 280

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L+NL  LN+S N   L  LP +   L+ L ELD+S N +T LP+ IG L  L+KL +E N
Sbjct: 281 LLNLINLNLSGN--QLSFLPSAFSRLIHLEELDLSSNSLTILPEYIGSLVSLKKLDVETN 338

Query: 186 PLVSPPMDV 194
            +   P  +
Sbjct: 339 NIEEIPHSI 347


>gi|224126505|ref|XP_002329571.1| predicted protein [Populus trichocarpa]
 gi|222870280|gb|EEF07411.1| predicted protein [Populus trichocarpa]
          Length = 492

 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/227 (40%), Positives = 130/227 (57%), Gaps = 7/227 (3%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S   +L N+  LD+ SNQ   LP +IG L+ LK L+V  N LE LP TI +C SL 
Sbjct: 255 LLPASF-GKLTNLENLDLGSNQFTQLPETIGSLTSLKKLNVETNELEELPHTIGSCTSLV 313

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL  +FN+LR LP+ IG +L  L+ L+++ N+I  LP ++ HL++LR L    N L+ +P
Sbjct: 314 ELRLDFNQLRALPEAIG-KLACLEILTLHYNRIRGLPTTMGHLSNLRELVVSFNELEFIP 372

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E+L    NL  LN++ NF  L  LP +IG L  L ELD+S ++I  LPDS   L KL   
Sbjct: 373 ENLCFAENLRKLNVANNFADLRALPRNIGNLELLEELDISDDQIRVLPDSFRLLLKLVVF 432

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSP-----KKKSW 222
             +  PL  PP  V   G  AV  +++  +N    +P     KK  W
Sbjct: 433 RADETPLEVPPRQVTTLGAQAVVQFMATLVNKRDTNPQLSKKKKGFW 479



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 77/198 (38%), Positives = 118/198 (59%), Gaps = 15/198 (7%)

Query: 13  VVVLDVHS---NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
            VVLD+     ++++ LP SIG LS +  LD+S N + +LP TI N ++L +L+ + N+L
Sbjct: 171 AVVLDLRGKLMDKVEWLPLSIGKLSVITELDLSENQIMALPSTINNLKALTKLDVHSNQL 230

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP++ G ELINL  L ++ N++ +LP S   LT+L  LD   N    LPE + +L +L
Sbjct: 231 INLPESFG-ELINLTDLDLHANRLRLLPASFGKLTNLENLDLGSNQFTQLPETIGSLTSL 289

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           + LN+  N   LE LP++IG   SLVEL + +N++  LP++IG L  L+ L+L  N +  
Sbjct: 290 KKLNVETN--ELEELPHTIGSCTSLVELRLDFNQLRALPEAIGKLACLEILTLHYNRI-- 345

Query: 190 PPMDVVEQGLSAVKGYLS 207
                  +GL    G+LS
Sbjct: 346 -------RGLPTTMGHLS 356



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 99/175 (56%), Gaps = 3/175 (1%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  NQ+  LP++I  L  L  LDV  N L +LP++     +L +L+ + N+LR L
Sbjct: 197 ITELDLSENQIMALPSTINNLKALTKLDVHSNQLINLPESFGELINLTDLDLHANRLRLL 256

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P + G +L NL+ L +  N+   LP+++  LTSL+ L+   N L+ LP  + +  +L  L
Sbjct: 257 PASFG-KLTNLENLDLGSNQFTQLPETIGSLTSLKKLNVETNELEELPHTIGSCTSLVEL 315

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            +  +F  L  LP +IG L  L  L + YN+I  LP ++G L  L++L +  N L
Sbjct: 316 RL--DFNQLRALPEAIGKLACLEILTLHYNRIRGLPTTMGHLSNLRELVVSFNEL 368


>gi|255557615|ref|XP_002519837.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223540883|gb|EEF42441.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 528

 Score =  138 bits (348), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/189 (43%), Positives = 117/189 (61%), Gaps = 1/189 (0%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SNQ   LP ++G L+ LK+L+V  N LE +P TIENC SL EL  +FN+LR LP+ IG +
Sbjct: 307 SNQFTHLPEALGDLTSLKILNVEINELEEIPYTIENCSSLVELRLDFNRLRALPEAIG-K 365

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L  L+ L+++ N+I  LP ++  L+ LR LD   N L+S+PE+L    +L+ L + +NF 
Sbjct: 366 LGCLEILTLHYNRIRKLPTTMGDLSYLRELDVSFNELESIPENLCFAASLKKLKVGENFA 425

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGL 199
            L  LP SIG L  L ELD+S ++I  LPDS   L KL+    +G PL  PP  V + G 
Sbjct: 426 DLTDLPRSIGNLEMLEELDISDDQIRVLPDSFRFLSKLRVFRADGTPLEVPPRQVAKLGA 485

Query: 200 SAVKGYLSE 208
            A   ++++
Sbjct: 486 QASVQFMAD 494



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 107/175 (61%), Gaps = 6/175 (3%)

Query: 14  VVLDVHS---NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           VVLD+     +Q++ LP SIG LS +  LD+S N + +LP TI + + L +L+ + N+L 
Sbjct: 206 VVLDLKGKLMDQIEWLPLSIGKLSFITELDLSENRIMALPTTITSLKVLTKLDIHSNQLI 265

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LPD+ G EL+NL  L +  N++  LP S  +L +L  LD   N    LPE L +L +L+
Sbjct: 266 NLPDSFG-ELMNLTDLDVRANRLKSLPSSFGNLKNLLNLDLSSNQFTHLPEALGDLTSLK 324

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           +LN+  N   LE +PY+I    SLVEL + +N++  LP++IG L  L+ L+L  N
Sbjct: 325 ILNVEIN--ELEEIPYTIENCSSLVELRLDFNRLRALPEAIGKLGCLEILTLHYN 377



 Score = 43.5 bits (101), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           +E LP SIG L  + ELD+S N+I  LP +I  L+ L KL +  N L++ P
Sbjct: 218 IEWLPLSIGKLSFITELDLSENRIMALPTTITSLKVLTKLDIHSNQLINLP 268


>gi|449461559|ref|XP_004148509.1| PREDICTED: protein lap1-like [Cucumis sativus]
          Length = 533

 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 87/208 (41%), Positives = 128/208 (61%), Gaps = 2/208 (0%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N++ LD+ SN    LP   G L+ LK L+V  N LE LP TI +C SL EL  +FN++
Sbjct: 293 LKNLISLDLSSNLYTHLPEITGKLTSLKKLNVETNELEELPYTIGSCSSLVELRLDFNEI 352

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           + LP+ IG +L  L+ L+++ N+I  LP ++ +L  L+ LD   N L+++PE+L   ++L
Sbjct: 353 KALPEAIG-KLECLEILTLHYNRIRGLPTTMGNLPKLKELDVSFNELETIPENLCFAVSL 411

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
             LN+ +NF  L  LP SIG L  L ELD+S N+I  LP+S   L KL+ L ++  PL  
Sbjct: 412 RKLNVGKNFADLTALPRSIGNLEMLEELDISANQIRFLPESFRFLSKLRVLQIDETPLEE 471

Query: 190 PPMDVVEQGLSAVKGYLSEKMNN-DHKS 216
           PP +VVE G  A+  Y+++ +   D KS
Sbjct: 472 PPREVVELGAQAIVKYMADAVEKRDTKS 499



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 98/165 (59%), Gaps = 3/165 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           ++++ LP SIG L  L  LD+S N + +LP  I   +SL + N + N+L  LPDT G EL
Sbjct: 212 DKMELLPISIGKLFDLVELDLSENKIMALPPGISGLQSLRKFNIHSNQLINLPDTFG-EL 270

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
           +NL  + ++ N++  LP S  +L +L  LD   N    LPE    L +L+ LN+  N   
Sbjct: 271 VNLTYVDLHANRLKSLPASFGNLKNLISLDLSSNLYTHLPEITGKLTSLKKLNVETN--E 328

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           LE LPY+IG   SLVEL + +N+I  LP++IG L  L+ L+L  N
Sbjct: 329 LEELPYTIGSCSSLVELRLDFNEIKALPEAIGKLECLEILTLHYN 373



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 33/51 (64%)

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           +E LP SIG L  LVELD+S NKI  LP  I  L+ L+K ++  N L++ P
Sbjct: 214 MELLPISIGKLFDLVELDLSENKIMALPPGISGLQSLRKFNIHSNQLINLP 264


>gi|449533090|ref|XP_004173510.1| PREDICTED: protein lap1-like, partial [Cucumis sativus]
          Length = 521

 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 87/208 (41%), Positives = 128/208 (61%), Gaps = 2/208 (0%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N++ LD+ SN    LP   G L+ LK L+V  N LE LP TI +C SL EL  +FN++
Sbjct: 281 LKNLISLDLSSNLYTHLPEITGKLTSLKKLNVETNELEELPYTIGSCSSLVELRLDFNEI 340

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           + LP+ IG +L  L+ L+++ N+I  LP ++ +L  L+ LD   N L+++PE+L   ++L
Sbjct: 341 KALPEAIG-KLECLEILTLHYNRIRGLPTTMGNLPKLKELDVSFNELETIPENLCFAVSL 399

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
             LN+ +NF  L  LP SIG L  L ELD+S N+I  LP+S   L KL+ L ++  PL  
Sbjct: 400 RKLNVGKNFADLTALPRSIGNLEMLEELDISANQIRFLPESFRFLSKLRVLQIDETPLEE 459

Query: 190 PPMDVVEQGLSAVKGYLSEKMNN-DHKS 216
           PP +VVE G  A+  Y+++ +   D KS
Sbjct: 460 PPREVVELGAQAIVKYMADAVEKRDTKS 487



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 98/165 (59%), Gaps = 3/165 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           ++++ LP SIG L  L  LD+S N + +LP  I   +SL + N + N+L  LPDT G EL
Sbjct: 200 DKMELLPISIGKLFDLVELDLSENKIMALPPGISGLQSLRKFNIHSNQLINLPDTFG-EL 258

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
           +NL  + ++ N++  LP S  +L +L  LD   N    LPE    L +L+ LN+  N   
Sbjct: 259 VNLTYVDLHANRLKSLPASFGNLKNLISLDLSSNLYTHLPEITGKLTSLKKLNVETN--E 316

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           LE LPY+IG   SLVEL + +N+I  LP++IG L  L+ L+L  N
Sbjct: 317 LEELPYTIGSCSSLVELRLDFNEIKALPEAIGKLECLEILTLHYN 361



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 33/51 (64%)

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           +E LP SIG L  LVELD+S NKI  LP  I  L+ L+K ++  N L++ P
Sbjct: 202 MELLPISIGKLFDLVELDLSENKIMALPPGISGLQSLRKFNIHSNQLINLP 252


>gi|357147505|ref|XP_003574369.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Brachypodium
           distachyon]
          Length = 535

 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 92/241 (38%), Positives = 133/241 (55%), Gaps = 25/241 (10%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNL---------------- 45
           +P+S    L +++ LD+H+NQLK LP S G L+ L  LD+S N                 
Sbjct: 269 LPDSF-GELSSLIDLDLHANQLKSLPTSFGNLTSLANLDLSSNQFRILPDCLGKLTNLRR 327

Query: 46  -------LESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ 98
                  LE LP TI +C SL EL  +FN+L+ LP+ IG +L  L+ L+++ N+I  LP 
Sbjct: 328 LIAETNELEELPYTIGSCMSLVELRLDFNQLKALPEAIG-KLEKLEILTLHYNRIKGLPT 386

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
           ++  LT LR LD   N ++ +PE +    +L  LN+S+NF  L  LP SIG L  L ELD
Sbjct: 387 TIGSLTRLRELDVSFNEVEGIPESICFATSLVKLNVSRNFADLRALPRSIGNLEMLEELD 446

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPK 218
           +S N+I  LPDS   L KL+    +  PL  PP +V++ G  AV  Y+ + + +   S K
Sbjct: 447 ISSNQIRALPDSFQFLAKLRVFHADETPLEVPPREVIKLGAQAVVQYVVDMVASRGASQK 506

Query: 219 K 219
           +
Sbjct: 507 E 507



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/174 (40%), Positives = 104/174 (59%), Gaps = 3/174 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           +Q++ LP S+G L  +  LD+S N + +LP TI + R L +L+ + N+L  LPD+ G EL
Sbjct: 218 DQIEWLPVSLGKLQDVTELDISENRIMALPSTIGSLRYLTKLDLHSNQLINLPDSFG-EL 276

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            +L  L ++ N++  LP S  +LTSL  LD   N  + LP+ L  L NL  L    N   
Sbjct: 277 SSLIDLDLHANQLKSLPTSFGNLTSLANLDLSSNQFRILPDCLGKLTNLRRLIAETN--E 334

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           LE LPY+IG  MSLVEL + +N++  LP++IG L KL+ L+L  N +   P  +
Sbjct: 335 LEELPYTIGSCMSLVELRLDFNQLKALPEAIGKLEKLEILTLHYNRIKGLPTTI 388


>gi|225427252|ref|XP_002278650.1| PREDICTED: leucine-rich repeat protein soc-2 [Vitis vinifera]
          Length = 533

 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/218 (41%), Positives = 129/218 (59%), Gaps = 7/218 (3%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SNQ   LP++IG L+ LK L+V  N LE +P TI +C SL EL  +FN+LR LP+ +G +
Sbjct: 303 SNQFTHLPDNIGSLTSLKRLNVDTNELEEVPYTIGSCTSLLELRLDFNQLRALPEAVG-K 361

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L  L+ L+++ N+I  LP ++ +L++LR LD   N L+S+PE+L   + L+ LN+ +NF 
Sbjct: 362 LECLEILTLHYNRIKGLPTTIGNLSNLRELDVSFNELESVPENLCFAVKLKKLNVGKNFA 421

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGL 199
            L  LP SIG L  L ELD+S  +I  LPDS   L KL+ L  +  PL  PP +V + G 
Sbjct: 422 DLRALPRSIGNLEMLEELDISDCQIRMLPDSFRFLSKLRVLRADETPLEVPPREVTKLGA 481

Query: 200 SAVKGYLSE---KMNNDHKSPKKKS---WVGKLVKYGT 231
             V  Y+++   K      S KKK    WV  + +  T
Sbjct: 482 QEVVQYMADLTAKWEARPLSSKKKGFWFWVCSIFRART 519



 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 111/183 (60%), Gaps = 6/183 (3%)

Query: 15  VLDVHS---NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           VLD+      +++ LP SIG LS +  L++S N + +LP T+   R+L +L+ + N+L  
Sbjct: 203 VLDLQGKLMEKIEWLPTSIGKLSDITELNLSENRIMALPSTMSGLRALTKLDVHSNQLIN 262

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LPD+IG EL+NL  L ++ N++  LP S  +L +L  L+   N    LP+++ +L +L+ 
Sbjct: 263 LPDSIG-ELVNLADLDLHANRLRSLPASFGNLVNLINLNLSSNQFTHLPDNIGSLTSLKR 321

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LN+  N   LE +PY+IG   SL+EL + +N++  LP+++G L  L+ L+L  N +   P
Sbjct: 322 LNVDTN--ELEEVPYTIGSCTSLLELRLDFNQLRALPEAVGKLECLEILTLHYNRIKGLP 379

Query: 192 MDV 194
             +
Sbjct: 380 TTI 382



 Score = 44.3 bits (103), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 35/59 (59%)

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
            + +E LP SIG L  + EL++S N+I  LP ++  LR L KL +  N L++ P  + E
Sbjct: 211 MEKIEWLPTSIGKLSDITELNLSENRIMALPSTMSGLRALTKLDVHSNQLINLPDSIGE 269


>gi|297742120|emb|CBI33907.3| unnamed protein product [Vitis vinifera]
          Length = 513

 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/218 (41%), Positives = 129/218 (59%), Gaps = 7/218 (3%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SNQ   LP++IG L+ LK L+V  N LE +P TI +C SL EL  +FN+LR LP+ +G +
Sbjct: 283 SNQFTHLPDNIGSLTSLKRLNVDTNELEEVPYTIGSCTSLLELRLDFNQLRALPEAVG-K 341

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L  L+ L+++ N+I  LP ++ +L++LR LD   N L+S+PE+L   + L+ LN+ +NF 
Sbjct: 342 LECLEILTLHYNRIKGLPTTIGNLSNLRELDVSFNELESVPENLCFAVKLKKLNVGKNFA 401

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGL 199
            L  LP SIG L  L ELD+S  +I  LPDS   L KL+ L  +  PL  PP +V + G 
Sbjct: 402 DLRALPRSIGNLEMLEELDISDCQIRMLPDSFRFLSKLRVLRADETPLEVPPREVTKLGA 461

Query: 200 SAVKGYLSE---KMNNDHKSPKKKS---WVGKLVKYGT 231
             V  Y+++   K      S KKK    WV  + +  T
Sbjct: 462 QEVVQYMADLTAKWEARPLSSKKKGFWFWVCSIFRART 499



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 111/183 (60%), Gaps = 6/183 (3%)

Query: 15  VLDVHS---NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           VLD+      +++ LP SIG LS +  L++S N + +LP T+   R+L +L+ + N+L  
Sbjct: 183 VLDLQGKLMEKIEWLPTSIGKLSDITELNLSENRIMALPSTMSGLRALTKLDVHSNQLIN 242

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LPD+IG EL+NL  L ++ N++  LP S  +L +L  L+   N    LP+++ +L +L+ 
Sbjct: 243 LPDSIG-ELVNLADLDLHANRLRSLPASFGNLVNLINLNLSSNQFTHLPDNIGSLTSLKR 301

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LN+  N   LE +PY+IG   SL+EL + +N++  LP+++G L  L+ L+L  N +   P
Sbjct: 302 LNVDTN--ELEEVPYTIGSCTSLLELRLDFNQLRALPEAVGKLECLEILTLHYNRIKGLP 359

Query: 192 MDV 194
             +
Sbjct: 360 TTI 362



 Score = 44.3 bits (103), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 35/59 (59%)

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
            + +E LP SIG L  + EL++S N+I  LP ++  LR L KL +  N L++ P  + E
Sbjct: 191 MEKIEWLPTSIGKLSDITELNLSENRIMALPSTMSGLRALTKLDVHSNQLINLPDSIGE 249


>gi|414867883|tpg|DAA46440.1| TPA: hypothetical protein ZEAMMB73_858342 [Zea mays]
          Length = 450

 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 81/182 (44%), Positives = 115/182 (63%), Gaps = 1/182 (0%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L+++  LD+ SN LK LP+ +G L  L+ L    N +E LP TI +C SL EL  +FN+L
Sbjct: 268 LMSLANLDLSSNLLKVLPDCLGKLKNLRRLIAETNEVEELPYTIGSCTSLVELRLDFNQL 327

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           + LP+ IG +L NL+ L+++ N+I  LP ++ HLT LR LD   N ++++PE++    +L
Sbjct: 328 KALPEAIG-KLENLEILTLHYNRIKGLPTTIGHLTRLRELDVSFNEVETIPENICFAASL 386

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
             LN+S+NF  L  LP SIG L  L ELD+S N+I  LPDS G L KL+    +  PL  
Sbjct: 387 VKLNVSRNFADLRALPKSIGELEMLEELDISSNQIRVLPDSFGHLSKLRVFHADETPLEV 446

Query: 190 PP 191
           PP
Sbjct: 447 PP 448



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 106/187 (56%), Gaps = 12/187 (6%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           +Q++ LP S+G L  +  LD+S N + +LP TI + R L +L+ + N+L  LPDT G EL
Sbjct: 187 DQVEWLPVSLGKLQDVTELDLSENRIMALPSTIGSLRYLTKLDLHSNQLINLPDTFG-EL 245

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            +L  L +  N++  LP S  +L SL  LD   N LK LP+ L  L NL  L    N   
Sbjct: 246 SSLIDLDLRANQLKSLPTSFGNLMSLANLDLSSNLLKVLPDCLGKLKNLRRLIAETN--E 303

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLS 200
           +E LPY+IG   SLVEL + +N++  LP++IG L  L+ L+L  N +         +GL 
Sbjct: 304 VEELPYTIGSCTSLVELRLDFNQLKALPEAIGKLENLEILTLHYNRI---------KGLP 354

Query: 201 AVKGYLS 207
              G+L+
Sbjct: 355 TTIGHLT 361



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 110/193 (56%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P SL  +L +V  LD+  N++  LP++IG L  L  LD+  N L +LP T     SL +
Sbjct: 192 LPVSL-GKLQDVTELDLSENRIMALPSTIGSLRYLTKLDLHSNQLINLPDTFGELSSLID 250

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+L+ LP + G  L++L  L ++ N + +LP  L  L +LR L A  N ++ LP 
Sbjct: 251 LDLRANQLKSLPTSFG-NLMSLANLDLSSNLLKVLPDCLGKLKNLRRLIAETNEVEELPY 309

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + +  +L  L +  +F  L+ LP +IG L +L  L + YN+I  LP +IG L +L++L 
Sbjct: 310 TIGSCTSLVELRL--DFNQLKALPEAIGKLENLEILTLHYNRIKGLPTTIGHLTRLRELD 367

Query: 182 LEGNPLVSPPMDV 194
           +  N + + P ++
Sbjct: 368 VSFNEVETIPENI 380


>gi|357476677|ref|XP_003608624.1| Leucine-rich repeat-containing protein [Medicago truncatula]
 gi|355509679|gb|AES90821.1| Leucine-rich repeat-containing protein [Medicago truncatula]
          Length = 493

 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 82/207 (39%), Positives = 127/207 (61%), Gaps = 2/207 (0%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P++   +L N++ LD+ +N    L  SIG L  LK L+V  N LE LP TI NC SL  
Sbjct: 257 LPDTF-GKLTNLIDLDLSTNDFTHLHESIGSLISLKRLNVETNKLEELPFTIGNCTSLTV 315

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           +  +FN+L+ LP+ IG +L  L+ L+++ N+I +LP ++ +L++L+ LD   N L+ +PE
Sbjct: 316 MKLDFNELKALPEAIG-KLECLEILTVHYNRIKMLPTTIGNLSNLKELDVSFNELEFVPE 374

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +    ++L+ LN+ +NF  L  LP SIG L  L ELD+S ++I  LPDS   L KL+   
Sbjct: 375 NFCFAVSLKKLNLGKNFADLRALPRSIGNLEMLEELDISGDQIKALPDSFRFLSKLRVFR 434

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSE 208
            +  PL  PP +VV+ G   V  Y+++
Sbjct: 435 ADETPLEVPPKEVVKLGAQEVVQYMAD 461



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 101/165 (61%), Gaps = 3/165 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           +Q++ LP SIG LS +  +D+S N + +LP TI   ++L +L+ + N+L  LP++ G EL
Sbjct: 183 DQMEWLPLSIGKLSDVTQIDLSENRIMALPTTIVGLKALTKLDLHSNQLINLPNSFG-EL 241

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
           INL  L ++ NK+  LP +   LT+L  LD   N    L E + +LI+L+ LN+  N   
Sbjct: 242 INLIELDLHANKLKSLPDTFGKLTNLIDLDLSTNDFTHLHESIGSLISLKRLNVETN--K 299

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           LE LP++IG   SL  + + +N++  LP++IG L  L+ L++  N
Sbjct: 300 LEELPFTIGNCTSLTVMKLDFNELKALPEAIGKLECLEILTVHYN 344



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/141 (39%), Positives = 81/141 (57%), Gaps = 4/141 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE++  +L  + +L VH N++K LP +IG LS LK LDVS N LE +P+      SL++
Sbjct: 326 LPEAI-GKLECLEILTVHYNRIKMLPTTIGNLSNLKELDVSFNELEFVPENFCFAVSLKK 384

Query: 62  LN--ANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
           LN   NF  LR LP +IG  L  L+ L I+ ++I  LP S   L+ LRV  A    L+  
Sbjct: 385 LNLGKNFADLRALPRSIG-NLEMLEELDISGDQIKALPDSFRFLSKLRVFRADETPLEVP 443

Query: 120 PEDLENLINLEVLNISQNFQY 140
           P+++  L   EV+    ++ Y
Sbjct: 444 PKEVVKLGAQEVVQYMADYVY 464



 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 32/51 (62%)

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           +E LP SIG L  + ++D+S N+I  LP +I  L+ L KL L  N L++ P
Sbjct: 185 MEWLPLSIGKLSDVTQIDLSENRIMALPTTIVGLKALTKLDLHSNQLINLP 235


>gi|194700008|gb|ACF84088.1| unknown [Zea mays]
          Length = 238

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/182 (44%), Positives = 115/182 (63%), Gaps = 1/182 (0%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L+++  LD+ SN LK LP+ +G L  L+ L    N +E LP TI +C SL EL  +FN+L
Sbjct: 56  LMSLANLDLSSNLLKVLPDCLGKLKNLRRLIAETNEVEELPYTIGSCTSLVELRLDFNQL 115

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           + LP+ IG +L NL+ L+++ N+I  LP ++ HLT LR LD   N ++++PE++    +L
Sbjct: 116 KALPEAIG-KLENLEILTLHYNRIKGLPTTIGHLTRLRELDVSFNEVETIPENICFAASL 174

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
             LN+S+NF  L  LP SIG L  L ELD+S N+I  LPDS G L KL+    +  PL  
Sbjct: 175 VKLNVSRNFADLRALPKSIGELEMLEELDISSNQIRVLPDSFGHLSKLRVFHADETPLEV 234

Query: 190 PP 191
           PP
Sbjct: 235 PP 236



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 94/179 (52%), Gaps = 26/179 (14%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+HSNQL  LP++ G LS L  LD+  N L+SLP +  N  SL  L+ + N L+ LPD 
Sbjct: 16  LDLHSNQLINLPDTFGELSSLIDLDLRANQLKSLPTSFGNLMSLANLDLSSNLLKVLPDC 75

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           +G +L NL+ L    N++  LP ++   TSL  L    N LK+LPE +  L NLE+    
Sbjct: 76  LG-KLKNLRRLIAETNEVEELPYTIGSCTSLVELRLDFNQLKALPEAIGKLENLEI---- 130

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
                                L + YN+I  LP +IG L +L++L +  N + + P ++
Sbjct: 131 ---------------------LTLHYNRIKGLPTTIGHLTRLRELDVSFNEVETIPENI 168



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 96/187 (51%), Gaps = 18/187 (9%)

Query: 48  SLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
           +LP TI + R L +L+ + N+L  LPDT G EL +L  L +  N++  LP S  +L SL 
Sbjct: 2   ALPSTIGSLRYLTKLDLHSNQLINLPDTFG-ELSSLIDLDLRANQLKSLPTSFGNLMSLA 60

Query: 108 VLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
            LD   N LK LP+ L  L NL  L    N   +E LPY+IG   SLVEL + +N++  L
Sbjct: 61  NLDLSSNLLKVLPDCLGKLKNLRRLIAETN--EVEELPYTIGSCTSLVELRLDFNQLKAL 118

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSE------KMNNDHKSPKKKS 221
           P++IG L  L+ L+L  N +         +GL    G+L+         N     P+   
Sbjct: 119 PEAIGKLENLEILTLHYNRI---------KGLPTTIGHLTRLRELDVSFNEVETIPENIC 169

Query: 222 WVGKLVK 228
           +   LVK
Sbjct: 170 FAASLVK 176



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/112 (44%), Positives = 74/112 (66%), Gaps = 4/112 (3%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE++  +L N+ +L +H N++K LP +IG L++L+ LDVS N +E++P+ I    SL +
Sbjct: 118 LPEAI-GKLENLEILTLHYNRIKGLPTTIGHLTRLRELDVSFNEVETIPENICFAASLVK 176

Query: 62  LNA--NFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDA 111
           LN   NF  LR LP +IG EL  L+ L I+ N+I +LP S  HL+ LRV  A
Sbjct: 177 LNVSRNFADLRALPKSIG-ELEMLEELDISSNQIRVLPDSFGHLSKLRVFHA 227


>gi|418752849|ref|ZP_13309106.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409966801|gb|EKO34641.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 398

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/187 (43%), Positives = 118/187 (63%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+ SNQL  LP  IG L  L+ LD+S N L +LPK I   ++L++LN N N
Sbjct: 133 GKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQNLQKLNLNSN 192

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  L   IG  L NL+TL +  N++  LP+ + +L +L+ LD   N L +LPE++ NL 
Sbjct: 193 QLTTLSKEIG-NLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIWNLQ 251

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++ +N   L TLP  IG L +L  LD+  N++ TLP+ IG L+ LQKL LEGN L
Sbjct: 252 NLQTLDLGRN--QLTTLPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQKLDLEGNQL 309

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 310 TTLPKEI 316



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/172 (41%), Positives = 109/172 (63%), Gaps = 3/172 (1%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELIN 82
           L  LP  IG L  L+ LD+S N L +LPK I   ++L++L+ + N+L  LP  IG +L N
Sbjct: 125 LWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIG-QLQN 183

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           L+ L++N N++  L + + +L +L+ LD   N L +LPE++ NL NL+ L++ +N   L 
Sbjct: 184 LQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRN--QLT 241

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           TLP  I  L +L  LD+  N++TTLP+ IG L+ LQ L LEGN L + P ++
Sbjct: 242 TLPEEIWNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLATLPEEI 293



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 119/217 (54%), Gaps = 22/217 (10%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L+++SNQL  L   IG L  L+ LD+  N L +LP+ I N ++L+ L+   N
Sbjct: 179 GQLQNLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRN 238

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ I + L NL+TL +  N++  LP+ + +L +L+ LD   N L +LPE++ NL 
Sbjct: 239 QLTTLPEEI-WNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQ 297

Query: 128 NLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELDVSYNKITT 166
           NL+ L++  N                        L TLP  IG L  L  L + +N++TT
Sbjct: 298 NLQKLDLEGNQLTTLPKEIGKLQKLKKLYLYNNRLTTLPIEIGNLQKLQTLSLGHNQLTT 357

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVK 203
           LP  IG L+KL+ L L GNP +    + +++ L  V+
Sbjct: 358 LPKEIGNLQKLKMLDLGGNPSLIDQKEKIQKMLPNVR 394



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 76/136 (55%), Gaps = 2/136 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +   L N+  LD+  NQL  LP  IG L  L+ LD+ GN L +LP+ I N ++L++
Sbjct: 243 LPEEI-WNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQK 301

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+L  LP  IG      K    N N++  LP  + +L  L+ L    N L +LP+
Sbjct: 302 LDLEGNQLTTLPKEIGKLQKLKKLYLYN-NRLTTLPIEIGNLQKLQTLSLGHNQLTTLPK 360

Query: 122 DLENLINLEVLNISQN 137
           ++ NL  L++L++  N
Sbjct: 361 EIGNLQKLKMLDLGGN 376


>gi|307153650|ref|YP_003889034.1| small GTP-binding protein [Cyanothece sp. PCC 7822]
 gi|306983878|gb|ADN15759.1| small GTP-binding protein [Cyanothece sp. PCC 7822]
          Length = 857

 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/208 (40%), Positives = 121/208 (58%), Gaps = 27/208 (12%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+T RL+N+  LD+ +N L  LP SI CL  L  L +S N L +LP++I        
Sbjct: 63  VPESIT-RLVNLTELDLRNNGLTTLPESITCLVNLTRLYLSSNGLTTLPESIT------- 114

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
                             L+NL  L ++ N +  LP+S+T L +L VL    N L +LPE
Sbjct: 115 -----------------RLVNLTVLGLSSNGLTTLPESITRLVNLTVLGLSSNGLTTLPE 157

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L+NL VL +S N   L  LP SI  L++L ELD+SYN++TTLP+SI  L  L++L 
Sbjct: 158 SITRLVNLTVLGLSNNG--LTILPESITRLVNLRELDLSYNRLTTLPESITRLVNLKELD 215

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEK 209
           L  NPL +PP++V +QG+ A++ Y  +K
Sbjct: 216 LRNNPLETPPLEVAKQGIEAIREYFRQK 243



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/129 (41%), Positives = 77/129 (59%), Gaps = 3/129 (2%)

Query: 67  NKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENL 126
           +KL ++P+ + FEL  L+ L++N N +  +P+S+T L +L  LD R N L +LPE +  L
Sbjct: 35  DKLTKIPEEV-FELEWLEVLTLNYNHLTSVPESITRLVNLTELDLRNNGLTTLPESITCL 93

Query: 127 INLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           +NL  L +S N   L TLP SI  L++L  L +S N +TTLP+SI  L  L  L L  N 
Sbjct: 94  VNLTRLYLSSNG--LTTLPESITRLVNLTVLGLSSNGLTTLPESITRLVNLTVLGLSSNG 151

Query: 187 LVSPPMDVV 195
           L + P  + 
Sbjct: 152 LTTLPESIT 160


>gi|421097204|ref|ZP_15557898.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410799695|gb|EKS01761.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 671

 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 86/206 (41%), Positives = 131/206 (63%), Gaps = 5/206 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L N+ +LD+  N+L+ LP  IG L  L++LD+  N LE+LPK I   ++L+E
Sbjct: 405 LPEEI-GKLQNLQILDLSHNKLEALPKEIGQLQNLQILDLRYNQLEALPKEIGKLQNLQE 463

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN  +NKL  LP  IG +L NL+ L++  N++  LP+ +  L +L+ L+ + N LK+LP+
Sbjct: 464 LNLRYNKLEALPKEIG-KLKNLQKLNLQYNQLKTLPKEIGKLKNLQKLNLQYNQLKTLPK 522

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           D+  L NL  L++  N   L+TLP  IG L +L EL++ YNK+ TLP  IG LR L+ L 
Sbjct: 523 DIGKLKNLRELDLRNN--QLKTLPKEIGKLQNLQELNLRYNKLETLPKEIGKLRNLKILY 580

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLS 207
           L  N L + P + +E+ ++  K YLS
Sbjct: 581 LSHNQLQALPKE-IEKLVNLRKLYLS 605



 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/182 (44%), Positives = 117/182 (64%), Gaps = 3/182 (1%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           V VLD+ SN+LK LP  IG L  L+ LD+S N L++LP+ I   ++L EL  + NKL  L
Sbjct: 47  VFVLDLSSNKLKTLPKEIGKLKNLQELDLSHNQLQALPEDIGQLQNLRELYLSDNKLEAL 106

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P+ IG  L NL+TL +  N++  LP+ +  L +L+ L    N L++LPED+ NL NL++L
Sbjct: 107 PEDIG-NLKNLRTLHLYNNQLKTLPEEIGKLQNLQELYLSDNKLEALPEDIGNLKNLQIL 165

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
           ++S+N   L+TLP  IG L +L EL +S NK+  LP+ IG L+ LQ L L  N L + P 
Sbjct: 166 DLSRN--QLKTLPEEIGKLQNLQELYLSDNKLEALPEDIGNLKNLQILDLSRNKLEALPK 223

Query: 193 DV 194
           ++
Sbjct: 224 EI 225



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/187 (40%), Positives = 121/187 (64%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +++NQL+ LP  IG L  L++LD+S N LE+LPK I   ++L+ L+  +N
Sbjct: 387 GQLQNLRELHLYNNQLETLPEEIGKLQNLQILDLSHNKLEALPKEIGQLQNLQILDLRYN 446

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L++  NK+  LP+ +  L +L+ L+ + N LK+LP+++  L 
Sbjct: 447 QLEALPKEIG-KLQNLQELNLRYNKLEALPKEIGKLKNLQKLNLQYNQLKTLPKEIGKLK 505

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+   +  L+TLP  IG L +L ELD+  N++ TLP  IG L+ LQ+L+L  N L
Sbjct: 506 NLQKLNLQ--YNQLKTLPKDIGKLKNLRELDLRNNQLKTLPKEIGKLQNLQELNLRYNKL 563

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 564 ETLPKEI 570



 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/193 (40%), Positives = 126/193 (65%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +   L N+  L +++NQLK LP  IG L  L+ L +S N LE+LP+ I N ++L+ 
Sbjct: 106 LPEDI-GNLKNLRTLHLYNNQLKTLPEEIGKLQNLQELYLSDNKLEALPEDIGNLKNLQI 164

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L+ LP+ IG +L NL+ L ++ NK+  LP+ + +L +L++LD   N L++LP+
Sbjct: 165 LDLSRNQLKTLPEEIG-KLQNLQELYLSDNKLEALPEDIGNLKNLQILDLSRNKLEALPK 223

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L NL  L++S N   LETLP  IG L +L  LD+ YN++ TLP+ IG L+ L++L 
Sbjct: 224 EIGKLRNLPKLDLSHN--QLETLPEEIGQLQNLQILDLRYNQLETLPEEIGQLQNLRELH 281

Query: 182 LEGNPLVSPPMDV 194
           L  N L + P ++
Sbjct: 282 LYNNKLKALPKEI 294



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 79/193 (40%), Positives = 122/193 (63%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +   L N+ +LD+  NQLK LP  IG L  L+ L +S N LE+LP+ I N ++L+ 
Sbjct: 152 LPEDI-GNLKNLQILDLSRNQLKTLPEEIGKLQNLQELYLSDNKLEALPEDIGNLKNLQI 210

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + NKL  LP  IG +L NL  L ++ N++  LP+ +  L +L++LD R N L++LPE
Sbjct: 211 LDLSRNKLEALPKEIG-KLRNLPKLDLSHNQLETLPEEIGQLQNLQILDLRYNQLETLPE 269

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L NL  L++  N   L+ LP  IG L +L  L++S NK+  LP+ IG L+ L+ L+
Sbjct: 270 EIGQLQNLRELHLYNN--KLKALPKEIGKLKNLRTLNLSTNKLEALPEEIGNLKNLRTLN 327

Query: 182 LEGNPLVSPPMDV 194
           L+ NPL + P ++
Sbjct: 328 LQYNPLKTLPEEI 340



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/251 (37%), Positives = 142/251 (56%), Gaps = 36/251 (14%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQL+ LP  IG L  L+ L +S N LE+LP+ I N ++L  L+   N
Sbjct: 65  GKLKNLQELDLSHNQLQALPEDIGQLQNLRELYLSDNKLEALPEDIGNLKNLRTLHLYNN 124

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK---------- 117
           +L+ LP+ IG +L NL+ L ++ NK+  LP+ + +L +L++LD   N LK          
Sbjct: 125 QLKTLPEEIG-KLQNLQELYLSDNKLEALPEDIGNLKNLQILDLSRNQLKTLPEEIGKLQ 183

Query: 118 -------------SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                        +LPED+ NL NL++L++S+N   LE LP  IG L +L +LD+S+N++
Sbjct: 184 NLQELYLSDNKLEALPEDIGNLKNLQILDLSRN--KLEALPKEIGKLRNLPKLDLSHNQL 241

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGLSAVKGYLSEKMNNDHKS-PKKKSW 222
            TLP+ IG L+ LQ L L  N L + P ++ + Q L  +  Y     NN  K+ PK+   
Sbjct: 242 ETLPEEIGQLQNLQILDLRYNQLETLPEEIGQLQNLRELHLY-----NNKLKALPKE--- 293

Query: 223 VGKLVKYGTFN 233
           +GKL    T N
Sbjct: 294 IGKLKNLRTLN 304



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/193 (40%), Positives = 119/193 (61%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L N+  L +++N+LK LP  IG L  L+ L++S N LE+LP+ I N ++L  
Sbjct: 267 LPEEI-GQLQNLRELHLYNNKLKALPKEIGKLKNLRTLNLSTNKLEALPEEIGNLKNLRT 325

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN  +N L+ LP+ IG +L NL  L ++ NK+  LP+ +  L +L  LD   N L++LP+
Sbjct: 326 LNLQYNPLKTLPEEIG-KLQNLPELDLSHNKLEALPKEIGQLQNLPKLDLSHNQLQALPK 384

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L NL  L++  N   LETLP  IG L +L  LD+S+NK+  LP  IG L+ LQ L 
Sbjct: 385 EIGQLQNLRELHLYNN--QLETLPEEIGKLQNLQILDLSHNKLEALPKEIGQLQNLQILD 442

Query: 182 LEGNPLVSPPMDV 194
           L  N L + P ++
Sbjct: 443 LRYNQLEALPKEI 455



 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/191 (39%), Positives = 116/191 (60%), Gaps = 3/191 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  NQLK LP  IG L  L+ L++  N L++LPK I   ++L EL+   N
Sbjct: 479 GKLKNLQKLNLQYNQLKTLPKEIGKLKNLQKLNLQYNQLKTLPKDIGKLKNLRELDLRNN 538

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG +L NL+ L++  NK+  LP+ +  L +L++L    N L++LP+++E L+
Sbjct: 539 QLKTLPKEIG-KLQNLQELNLRYNKLETLPKEIGKLRNLKILYLSHNQLQALPKEIEKLV 597

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L +S N   L+ LP  IG L +L  LD+  N + TLP  IG L+ LQ L L+   L
Sbjct: 598 NLRKLYLSGN--QLQALPKEIGKLQNLQGLDLGNNPLKTLPKDIGKLKSLQTLCLDNKQL 655

Query: 188 VSPPMDVVEQG 198
            S P+++ + G
Sbjct: 656 ESLPIEIGKLG 666



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 71/161 (44%), Positives = 106/161 (65%), Gaps = 3/161 (1%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           SK+ VLD+S N L++LPK I   ++L+EL+ + N+L+ LP+ IG +L NL+ L ++ NK+
Sbjct: 45  SKVFVLDLSSNKLKTLPKEIGKLKNLQELDLSHNQLQALPEDIG-QLQNLRELYLSDNKL 103

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
             LP+ + +L +LR L    N LK+LPE++  L NL+ L +S N   LE LP  IG L +
Sbjct: 104 EALPEDIGNLKNLRTLHLYNNQLKTLPEEIGKLQNLQELYLSDN--KLEALPEDIGNLKN 161

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L  LD+S N++ TLP+ IG L+ LQ+L L  N L + P D+
Sbjct: 162 LQILDLSRNQLKTLPEEIGKLQNLQELYLSDNKLEALPEDI 202



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 103/170 (60%), Gaps = 3/170 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  NQLK LP  IG L  L+ LD+  N L++LPK I   ++L+ELN  +N
Sbjct: 502 GKLKNLQKLNLQYNQLKTLPKDIGKLKNLRELDLRNNQLKTLPKEIGKLQNLQELNLRYN 561

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  LP  IG +L NLK L ++ N++  LP+ +  L +LR L    N L++LP+++  L 
Sbjct: 562 KLETLPKEIG-KLRNLKILYLSHNQLQALPKEIEKLVNLRKLYLSGNQLQALPKEIGKLQ 620

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
           NL+ L++  N   L+TLP  IG L SL  L +   ++ +LP  IG L +L
Sbjct: 621 NLQGLDLGNN--PLKTLPKDIGKLKSLQTLCLDNKQLESLPIEIGKLGEL 668



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 61/99 (61%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L + + + VLD   N LK+LP+++  L NL+ L++S N   L+ LP  IG L +L 
Sbjct: 37  LRKALANPSKVFVLDLSSNKLKTLPKEIGKLKNLQELDLSHN--QLQALPEDIGQLQNLR 94

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           EL +S NK+  LP+ IG L+ L+ L L  N L + P ++
Sbjct: 95  ELYLSDNKLEALPEDIGNLKNLRTLHLYNNQLKTLPEEI 133


>gi|418744888|ref|ZP_13301233.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794219|gb|EKR92129.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 481

 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/187 (43%), Positives = 117/187 (62%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+ SNQL  LP  IG L  L+ LD+S N L +LPK I   ++L++LN N N
Sbjct: 32  GKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQNLQKLNLNSN 91

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  L   IG  L NL+TL +  N++  LP+ + +L +L+ LD   N L +LPE++ NL 
Sbjct: 92  QLTTLSKEIG-NLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIWNLQ 150

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++ +N   L TLP  IG L +L  LD+  N++ TLP+ IG L+ LQ L LEGN L
Sbjct: 151 NLQTLDLGRN--QLTTLPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQL 208

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 209 TTLPKEI 215



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/172 (41%), Positives = 109/172 (63%), Gaps = 3/172 (1%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELIN 82
           L  LP  IG L  L+ LD+S N L +LPK I   ++L++L+ + N+L  LP  IG +L N
Sbjct: 24  LWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIG-QLQN 82

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           L+ L++N N++  L + + +L +L+ LD   N L +LPE++ NL NL+ L++ +N   L 
Sbjct: 83  LQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRN--QLT 140

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           TLP  I  L +L  LD+  N++TTLP+ IG L+ LQ L LEGN L + P ++
Sbjct: 141 TLPEEIWNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLATLPEEI 192



 Score =  114 bits (285), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/193 (39%), Positives = 116/193 (60%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +   L N+  LD+  NQL  LP  IG L  L+ LD+ GN L +LP+ I N ++L+ 
Sbjct: 142 LPEEI-WNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQT 200

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+L  LP  IG +L NLK L +  N++  LP+ +  L +L+ L    N L +LP+
Sbjct: 201 LDLEGNQLTTLPKEIG-KLQNLKKLYLYNNRLTTLPKEVGKLQNLQELYLYNNRLTTLPK 259

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++E+L NL++L++  N   L TLP  +G L +L EL +  N++TTLP  IG L+ LQ L+
Sbjct: 260 EIEDLQNLKILSLGSN--QLTTLPKEVGKLQNLQELYLYNNRLTTLPKEIGNLQNLQDLN 317

Query: 182 LEGNPLVSPPMDV 194
           L  N   + P ++
Sbjct: 318 LNSNQFTTLPKEI 330



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 116/215 (53%), Gaps = 22/215 (10%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+ +L + SNQL  LP  +G L  L+ L +  N L +LPK I N ++L++LN N N+ 
Sbjct: 264 LQNLKILSLGSNQLTTLPKEVGKLQNLQELYLYNNRLTTLPKEIGNLQNLQDLNLNSNQF 323

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  I + L  L+ LS+  N++  LP+ + +L +L+ LD   N L +LPE++ NL NL
Sbjct: 324 TTLPKEI-WNLQKLQKLSLGRNQLTTLPEEIWNLQNLKTLDLEGNQLATLPEEIGNLQNL 382

Query: 130 EVLNISQNF---------------------QYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           + L++  N                        L TLP  IG L  L  L + +N++TTLP
Sbjct: 383 QKLDLEGNQLTTLPKEIGKLQKLKKLYLYNNRLTTLPIEIGNLQKLQTLSLGHNQLTTLP 442

Query: 169 DSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVK 203
             IG L+KL+ L L GNP +    + +++ L  V+
Sbjct: 443 KEIGNLQKLKMLDLGGNPSLIDQKEKIQKMLPNVR 477



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/214 (37%), Positives = 116/214 (54%), Gaps = 23/214 (10%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +   L N+  LD+  NQL  LP  IG L  LK L +  N L +LPK +   ++L+E
Sbjct: 188 LPEEI-GNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTLPKEVGKLQNLQE 246

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+L  LP  I  +L NLK LS+  N++  LP+ +  L +L+ L    N L +LP+
Sbjct: 247 LYLYNNRLTTLPKEIE-DLQNLKILSLGSNQLTTLPKEVGKLQNLQELYLYNNRLTTLPK 305

Query: 122 DLENLINLEVLNISQN-----------FQYLE----------TLPYSIGLLMSLVELDVS 160
           ++ NL NL+ LN++ N            Q L+          TLP  I  L +L  LD+ 
Sbjct: 306 EIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTLPEEIWNLQNLKTLDLE 365

Query: 161 YNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N++ TLP+ IG L+ LQKL LEGN L + P ++
Sbjct: 366 GNQLATLPEEIGNLQNLQKLDLEGNQLTTLPKEI 399



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 112/210 (53%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +++N+L  LP  I  L  LK+L +  N L +LPK +   ++L+EL    N
Sbjct: 239 GKLQNLQELYLYNNRLTTLPKEIEDLQNLKILSLGSNQLTTLPKEVGKLQNLQELYLYNN 298

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG  L NL+ L++N N+   LP+ + +L  L+ L    N L +LPE++ NL 
Sbjct: 299 RLTTLPKEIG-NLQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTLPEEIWNLQ 357

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGC-------------- 173
           NL+ L++  N   L TLP  IG L +L +LD+  N++TTLP  IG               
Sbjct: 358 NLKTLDLEGN--QLATLPEEIGNLQNLQKLDLEGNQLTTLPKEIGKLQKLKKLYLYNNRL 415

Query: 174 ---------LRKLQKLSLEGNPLVSPPMDV 194
                    L+KLQ LSL  N L + P ++
Sbjct: 416 TTLPIEIGNLQKLQTLSLGHNQLTTLPKEI 445



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 64/109 (58%), Gaps = 2/109 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +   L N+  LD+  NQL  LP  IG L  L+ LD+ GN L +LPK I   + L++
Sbjct: 349 LPEEI-WNLQNLKTLDLEGNQLATLPEEIGNLQNLQKLDLEGNQLTTLPKEIGKLQKLKK 407

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD 110
           L    N+L  LP  IG  L  L+TLS+  N++  LP+ + +L  L++LD
Sbjct: 408 LYLYNNRLTTLPIEIG-NLQKLQTLSLGHNQLTTLPKEIGNLQKLKMLD 455


>gi|421094636|ref|ZP_15555352.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410362698|gb|EKP13735.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|456891450|gb|EMG02161.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 331

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/197 (43%), Positives = 126/197 (63%), Gaps = 7/197 (3%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V +L +H N+LK LP  IG L KL+VLD+ GN L +LPK IE  ++L ELN N N+   
Sbjct: 44  DVRILSLH-NKLKTLPKDIGKLKKLRVLDLRGNQLTTLPKEIEQLQNLTELNLNKNQFTT 102

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           +P+ IG+ L NL+ L I  N++  LP+ +  L +L+VL    N L +LP ++  L NL+ 
Sbjct: 103 IPNEIGY-LKNLQELHIGGNQLKTLPKDIGKLKNLQVLHLSNNKLATLPNEIRKLQNLQK 161

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +S+N   L  LP  IG L +L +LD++YN++TTLP+ IG L+ LQ+L+L  N L   P
Sbjct: 162 LYLSEN--QLTILPEEIGKLKNLTKLDLNYNELTTLPNEIGKLQNLQELTLGYNQLTVLP 219

Query: 192 MDVVE-QGLSAVKGYLS 207
            ++ E Q L+ +  YLS
Sbjct: 220 KEIRELQKLTVL--YLS 234



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 113/195 (57%), Gaps = 3/195 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL + +N+L  LPN I  L  L+ L +S N L  LP+ I   ++L +L+ N+N
Sbjct: 131 GKLKNLQVLHLSNNKLATLPNEIRKLQNLQKLYLSENQLTILPEEIGKLKNLTKLDLNYN 190

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+ L++  N++ +LP+ +  L  L VL    N  K+LP+++  L 
Sbjct: 191 ELTTLPNEIG-KLQNLQELTLGYNQLTVLPKEIRELQKLTVLYLSYNQFKTLPKEIGELQ 249

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L VL +  N   L+  P  IG L  L  LD+S+N++TTLP  IG L+ L+KL L+  P 
Sbjct: 250 KLTVLYLRSN--QLKMFPNEIGKLKELESLDLSHNQLTTLPKEIGELQNLRKLYLDDIPA 307

Query: 188 VSPPMDVVEQGLSAV 202
           +    + + + L  V
Sbjct: 308 LRSQEEKIRKLLPEV 322



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 9/145 (6%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++PE +  +L N+  LD++ N+L  LPN IG L  L+ L +  N L  LPK I   + L 
Sbjct: 171 ILPEEI-GKLKNLTKLDLNYNELTTLPNEIGKLQNLQELTLGYNQLTVLPKEIRELQKLT 229

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L  ++N+ + LP  IG EL  L  L +  N++ + P  +  L  L  LD   N L +LP
Sbjct: 230 VLYLSYNQFKTLPKEIG-ELQKLTVLYLRSNQLKMFPNEIGKLKELESLDLSHNQLTTLP 288

Query: 121 EDLENLINLEVLNISQNFQYLETLP 145
           +++  L NL  L       YL+ +P
Sbjct: 289 KEIGELQNLRKL-------YLDDIP 306


>gi|356563459|ref|XP_003549980.1| PREDICTED: leucine-rich repeat protein lrrA-like [Glycine max]
          Length = 518

 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/199 (41%), Positives = 119/199 (59%), Gaps = 1/199 (0%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+  LD+ SN    LP +IG LS LK L+V  N LE LP TI NC SL  L  + N+L
Sbjct: 289 LTNLTDLDLSSNGFTDLPETIGNLSSLKRLNVETNELEELPYTIGNCSSLSVLKLDLNQL 348

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           + LP+ IG +L  L+ L+++ N++  LP ++ +L +L+ LD   N L+ +PE L    NL
Sbjct: 349 KALPEAIG-KLECLEILTLHYNRVKRLPSTMDNLCNLKELDVSFNELEFVPESLCFATNL 407

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           + LN+ +NF  L  LP SIG L  L ELD+S ++I  LP+S   L KL+    +  PL  
Sbjct: 408 KKLNLGKNFADLRALPASIGNLEMLEELDISDDQIKALPESFRFLSKLRVFRADETPLDL 467

Query: 190 PPMDVVEQGLSAVKGYLSE 208
           PP ++V+ G   V  Y+++
Sbjct: 468 PPRELVKLGSQEVVQYMAD 486



 Score =  100 bits (249), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 100/165 (60%), Gaps = 3/165 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           +Q++ LP SIG LS +  +D+S N L +LP TI   ++L +L+ + N+L  LP + G EL
Sbjct: 208 DQMEWLPVSIGKLSDVTEMDLSENRLMALPTTIVGLKALTKLDLHSNQLINLPHSFG-EL 266

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
           INL  L ++ NK+  LP +  +LT+L  LD   N    LPE + NL +L+ LN+  N   
Sbjct: 267 INLVDLDLHANKLKSLPATFGNLTNLTDLDLSSNGFTDLPETIGNLSSLKRLNVETN--E 324

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           LE LPY+IG   SL  L +  N++  LP++IG L  L+ L+L  N
Sbjct: 325 LEELPYTIGNCSSLSVLKLDLNQLKALPEAIGKLECLEILTLHYN 369



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 4/139 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE++  +L  + +L +H N++K LP+++  L  LK LDVS N LE +P+++    +L++
Sbjct: 351 LPEAI-GKLECLEILTLHYNRVKRLPSTMDNLCNLKELDVSFNELEFVPESLCFATNLKK 409

Query: 62  LN--ANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
           LN   NF  LR LP +IG  L  L+ L I+ ++I  LP+S   L+ LRV  A    L   
Sbjct: 410 LNLGKNFADLRALPASIG-NLEMLEELDISDDQIKALPESFRFLSKLRVFRADETPLDLP 468

Query: 120 PEDLENLINLEVLNISQNF 138
           P +L  L + EV+    +F
Sbjct: 469 PRELVKLGSQEVVQYMADF 487



 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 32/51 (62%)

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           +E LP SIG L  + E+D+S N++  LP +I  L+ L KL L  N L++ P
Sbjct: 210 MEWLPVSIGKLSDVTEMDLSENRLMALPTTIVGLKALTKLDLHSNQLINLP 260


>gi|421110748|ref|ZP_15571239.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803845|gb|EKS09972.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 291

 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 80/187 (42%), Positives = 119/187 (63%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L+++SNQ   LP  IG L KL+ LD++ + L +LPK I   + L++LN   N
Sbjct: 73  GNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLDLNYSRLTTLPKEIGKLQKLQKLNLYKN 132

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG +L NLK LS+N N++  LP+ + +L  L+ LD   N LK+LP+++E L 
Sbjct: 133 QLKTLPKEIG-KLQNLKNLSLNGNELTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQ 191

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   L TLP  IG L +L EL+++ N+ TTLP+ IG L+ L+ L+L GN L
Sbjct: 192 KLEALHLGNN--ELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQSLESLNLSGNSL 249

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 250 TSFPEEI 256



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 64/195 (32%), Positives = 103/195 (52%), Gaps = 26/195 (13%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  +  L+++ NQLK LP  IG L  LK L ++GN L +LPK I N + L+ L+   N
Sbjct: 119 GKLQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQKLQTLDLAQN 178

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  I  +L  L+ L +  N++  LP+ + +L +L+ L+   N   +LPE++ NL 
Sbjct: 179 QLKTLPKEIE-KLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQ 237

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +LE LN+                         S N +T+ P+ IG L+KL+ L L GNP 
Sbjct: 238 SLESLNL-------------------------SGNSLTSFPEEIGKLQKLKWLYLGGNPF 272

Query: 188 VSPPMDVVEQGLSAV 202
           +    + +++ L  V
Sbjct: 273 LRSQKEKIQKLLPNV 287



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 47/108 (43%), Positives = 69/108 (63%), Gaps = 6/108 (5%)

Query: 91  NKIVILPQSLTHLTSLRVLD----ARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPY 146
           +K   LP++L H T +RVLD       N L +LP+++ NL NL+ LN++ N     TLP 
Sbjct: 36  DKYYNLPEALQHPTDVRVLDLGPPEGGNQLTTLPKEIGNLQNLQELNLNSN--QFTTLPE 93

Query: 147 SIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            IG L  L +LD++Y+++TTLP  IG L+KLQKL+L  N L + P ++
Sbjct: 94  EIGNLQKLQKLDLNYSRLTTLPKEIGKLQKLQKLNLYKNQLKTLPKEI 141


>gi|418678790|ref|ZP_13240064.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|400321980|gb|EJO69840.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
          Length = 379

 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 83/187 (44%), Positives = 115/187 (61%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L ++ NQL  LPN IG L  L+VLD+  N L  LPK I   ++L+ LN  FN
Sbjct: 68  GKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LPD +G +L NL+ L+++ NK+ ILP+ +  L +L+VL+  LN L  LPE +  L 
Sbjct: 128 RLTILPDEVG-QLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQ 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+VLN+  N   L  LP  IG L +L  L+   N++TT P  IG L KLQKL L GN L
Sbjct: 187 NLQVLNLDLN--KLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLSKLQKLYLYGNQL 244

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 245 TTLPEEI 251



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/195 (35%), Positives = 114/195 (58%), Gaps = 4/195 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++PE +  +L N+ VL++  N+L  LP  IG L  L++L+  GN L + PK I     L+
Sbjct: 177 ILPEKI-GQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLSKLQ 235

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L    N+L  LP+ IG +L  L+ L +  N +  LP+ +  L  L+ L    N + + P
Sbjct: 236 KLYLYGNQLTTLPEEIG-QLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFP 294

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++  L NL+ LN+   F  L TLP  IG L +L EL++ +N++ TLP  +G L+KL+KL
Sbjct: 295 KEIGQLQNLQELNLG--FNQLTTLPQEIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKL 352

Query: 181 SLEGNPLVSPPMDVV 195
           +L  NP+ S  ++ +
Sbjct: 353 NLYNNPIASEKIERI 367



 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 69/180 (38%), Positives = 107/180 (59%), Gaps = 3/180 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +L++  ++L  L   IG L  L+ L ++ N L +LP  I   ++L+ L+   N+L  LP 
Sbjct: 52  ILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPK 111

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            IG +L NL+ L++  N++ ILP  +  L +L+VL+  LN L  LPE +  L NL+VLN+
Sbjct: 112 EIG-KLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNL 170

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N   L  LP  IG L +L  L++  NK+T LP+ IG L+ LQ L+ +GN L + P ++
Sbjct: 171 DLN--KLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEI 228



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 115/198 (58%), Gaps = 11/198 (5%)

Query: 37  KVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVIL 96
           ++L++SG+ L +L K I   ++L++L  N+N+L  LP+ IG +L NL+ L +  N++ IL
Sbjct: 51  RILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIG-QLQNLQVLDLYSNELTIL 109

Query: 97  PQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVE 156
           P+ +  L +L+VL+   N L  LP+++  L NL+VLN+  N   L  LP  IG L +L  
Sbjct: 110 PKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLN--KLTILPEKIGQLQNLQV 167

Query: 157 LDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGLSAVKGYLSEKMNNDHK 215
           L++  NK+T LP+ IG L+ LQ L+L+ N L   P  + + Q L      L+ + N    
Sbjct: 168 LNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQI----LNSQGNQLTT 223

Query: 216 SPKKKSWVGKLVK---YG 230
            PK+   + KL K   YG
Sbjct: 224 FPKEIGQLSKLQKLYLYG 241



 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 3/115 (2%)

Query: 81  INLKTLSINCNK-IVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           +N ++++I  NK + IL   +     L+         ++L E L+N  +  +LN+S +  
Sbjct: 1   MNFQSINIRLNKRLTILLILICFSCKLQAQSKETQTYRNLTEALQNPKDARILNLSGS-- 58

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L TL   IG L +L +L ++YN++TTLP+ IG L+ LQ L L  N L   P ++
Sbjct: 59  KLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEI 113


>gi|428311014|ref|YP_007121991.1| hypothetical protein Mic7113_2802 [Microcoleus sp. PCC 7113]
 gi|428252626|gb|AFZ18585.1| leucine-rich repeat (LRR) protein [Microcoleus sp. PCC 7113]
          Length = 348

 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/233 (39%), Positives = 131/233 (56%), Gaps = 33/233 (14%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L+N+  L ++SN+L  LP  IG L+ L  L    N L +LPK I N  +L  
Sbjct: 123 LPEEI-GKLINLTRLSLYSNRLTGLPKEIGNLTHLNRLSCDNNQLMTLPKEIGNFINLTG 181

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ----------------------- 98
           L+ + N+LR+LP  IG  L NL  LSI+ NK+  LP+                       
Sbjct: 182 LSLDNNQLRELPQDIG-NLTNLTRLSIDNNKLTSLPKEIGNLTNLTQLSLDNNKLTELLK 240

Query: 99  ---SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
              +LTHLT+L + D+  N LKSLPE++  LINL  L++ +N   L +LP +IG L  L 
Sbjct: 241 EIGNLTHLTALAI-DS--NQLKSLPEEMGQLINLTTLSLYKN--QLSSLPTAIGNLTHLT 295

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSE 208
           +L +  N++T LP  IG L  L  LSL+ NPL SPP ++++QG  A+  YL +
Sbjct: 296 KLSLYSNQLTALPKEIGILTNLTSLSLDNNPLTSPPSEIIQQGTQAILAYLRQ 348



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/188 (40%), Positives = 109/188 (57%), Gaps = 4/188 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+P  +  +L N+  LD+  NQLK LP  IG L+ L  L +  N L +LPK I N  +L 
Sbjct: 53  MLPPEI-GQLTNLKELDLSGNQLKALPEEIGNLTNLTDLCLDNNQLTALPKEIGNLTNLT 111

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+ + N+L  LP+ IG +LINL  LS+  N++  LP+ + +LT L  L    N L +LP
Sbjct: 112 GLSLDSNQLTALPEEIG-KLINLTRLSLYSNRLTGLPKEIGNLTHLNRLSCDNNQLMTLP 170

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++ N INL  L++  N   L  LP  IG L +L  L +  NK+T+LP  IG L  L +L
Sbjct: 171 KEIGNFINLTGLSLDNN--QLRELPQDIGNLTNLTRLSIDNNKLTSLPKEIGNLTNLTQL 228

Query: 181 SLEGNPLV 188
           SL+ N L 
Sbjct: 229 SLDNNKLT 236



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 106/187 (56%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L ++  L ++ NQL  LP  IG L+ LK LD+SGN L++LP+ I N  +L +L  + N
Sbjct: 36  GNLTHLTRLSLYGNQLGMLPPEIGQLTNLKELDLSGNQLKALPEEIGNLTNLTDLCLDNN 95

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG  L NL  LS++ N++  LP+ +  L +L  L    N L  LP+++ NL 
Sbjct: 96  QLTALPKEIG-NLTNLTGLSLDSNQLTALPEEIGKLINLTRLSLYSNRLTGLPKEIGNLT 154

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  L+   N   L TLP  IG  ++L  L +  N++  LP  IG L  L +LS++ N L
Sbjct: 155 HLNRLSCDNN--QLMTLPKEIGNFINLTGLSLDNNQLRELPQDIGNLTNLTRLSIDNNKL 212

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 213 TSLPKEI 219



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/182 (39%), Positives = 101/182 (55%), Gaps = 3/182 (1%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           V  LD+H++QL  LP  IG L+ L  L + GN L  LP  I    +L+EL+ + N+L+ L
Sbjct: 18  VTSLDLHNHQLTTLPAEIGNLTHLTRLSLYGNQLGMLPPEIGQLTNLKELDLSGNQLKAL 77

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P+ IG  L NL  L ++ N++  LP+ + +LT+L  L    N L +LPE++  LINL  L
Sbjct: 78  PEEIG-NLTNLTDLCLDNNQLTALPKEIGNLTNLTGLSLDSNQLTALPEEIGKLINLTRL 136

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
           ++  N   L  LP  IG L  L  L    N++ TLP  IG    L  LSL+ N L   P 
Sbjct: 137 SLYSN--RLTGLPKEIGNLTHLNRLSCDNNQLMTLPKEIGNFINLTGLSLDNNQLRELPQ 194

Query: 193 DV 194
           D+
Sbjct: 195 DI 196


>gi|421099978|ref|ZP_15560620.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796959|gb|EKR99076.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 580

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/180 (43%), Positives = 116/180 (64%), Gaps = 3/180 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +LD+  NQLK LP  IG L KL+ L++  N L++LPK I   ++L+ LN + N+L+ LP 
Sbjct: 340 LLDLSGNQLKTLPKDIGQLQKLQDLELDSNQLKTLPKDIGKLQNLQVLNLSNNQLKTLPK 399

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            IG +L  L+ L +  N++  LP+ +  L  L+ L+   N L +LP+D+E L NL+VLN+
Sbjct: 400 DIG-QLQKLRVLELYNNQLKTLPKEIGQLQKLQELNLSHNKLTTLPKDIEKLQNLQVLNL 458

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           + N   L+TLP  IG L +L  L++S+NK+TTLP  IG L+ LQ+L L  N L + P D+
Sbjct: 459 TNN--QLKTLPKEIGQLQNLQVLNLSHNKLTTLPKDIGKLQNLQELYLTNNQLTTLPKDI 516



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/194 (43%), Positives = 114/194 (58%), Gaps = 13/194 (6%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  NQL  LPN IG L  L+ LD+SGN L++LPK I   ++L EL+ N N+L+ LP  
Sbjct: 156 LDLRDNQLTTLPNEIGKLQNLQKLDLSGNQLKTLPKEIGKLQNLRELDLNDNQLKTLPKE 215

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG+ L  L+ L +  N++  LP  +  L +L+ LD   N LK+LP+++  L NL+ L + 
Sbjct: 216 IGY-LKELQDLDLRDNQLTTLPNEIGKLQNLQKLDLSGNQLKTLPKEIGKLQNLQELYLY 274

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK-LSLEGNPLVSPPMDV 194
            N   L+TLP  IG L  L  L +S NK+TTLP  IG L+KLQ  L L  N L + P D+
Sbjct: 275 GN--QLKTLPKEIGYLKELQVLHLSDNKLTTLPKEIGQLQKLQALLHLGDNQLKTLPKDI 332

Query: 195 VEQGLSAVKGYLSE 208
                    GYL E
Sbjct: 333 ---------GYLKE 337



 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 114/179 (63%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L++ SNQLK LP  IG L  L+VL++S N L++LPK I   + L  L    N+L+ LP  
Sbjct: 364 LELDSNQLKTLPKDIGKLQNLQVLNLSNNQLKTLPKDIGQLQKLRVLELYNNQLKTLPKE 423

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L  L+ L+++ NK+  LP+ +  L +L+VL+   N LK+LP+++  L NL+VLN+S
Sbjct: 424 IG-QLQKLQELNLSHNKLTTLPKDIEKLQNLQVLNLTNNQLKTLPKEIGQLQNLQVLNLS 482

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L TLP  IG L +L EL ++ N++TTLP  I  L+ LQ+L L  N L + P ++
Sbjct: 483 HN--KLTTLPKDIGKLQNLQELYLTNNQLTTLPKDIEKLQNLQELYLTNNQLTTLPKEI 539



 Score =  113 bits (283), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 78/196 (39%), Positives = 121/196 (61%), Gaps = 4/196 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + +NQLK LP  IG L +L+ LD+  N L +LP  I   ++L++L+ + N
Sbjct: 125 GKLQNLQELYLTNNQLKTLPKEIGYLKELQDLDLRDNQLTTLPNEIGKLQNLQKLDLSGN 184

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG +L NL+ L +N N++  LP+ + +L  L+ LD R N L +LP ++  L 
Sbjct: 185 QLKTLPKEIG-KLQNLRELDLNDNQLKTLPKEIGYLKELQDLDLRDNQLTTLPNEIGKLQ 243

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++S N   L+TLP  IG L +L EL +  N++ TLP  IG L++LQ L L  N L
Sbjct: 244 NLQKLDLSGN--QLKTLPKEIGKLQNLQELYLYGNQLKTLPKEIGYLKELQVLHLSDNKL 301

Query: 188 VSPPMDVVE-QGLSAV 202
            + P ++ + Q L A+
Sbjct: 302 TTLPKEIGQLQKLQAL 317



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/191 (39%), Positives = 115/191 (60%), Gaps = 12/191 (6%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           + +NQLK LP  IG L  L+ L ++ N L++LPK I   + L++L+   N+L  LP+ IG
Sbjct: 112 LDNNQLKTLPKEIGKLQNLQELYLTNNQLKTLPKEIGYLKELQDLDLRDNQLTTLPNEIG 171

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
            +L NL+ L ++ N++  LP+ +  L +LR LD   N LK+LP+++  L  L+ L++  N
Sbjct: 172 -KLQNLQKLDLSGNQLKTLPKEIGKLQNLRELDLNDNQLKTLPKEIGYLKELQDLDLRDN 230

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQ 197
              L TLP  IG L +L +LD+S N++ TLP  IG L+ LQ+L L GN L + P ++   
Sbjct: 231 --QLTTLPNEIGKLQNLQKLDLSGNQLKTLPKEIGKLQNLQELYLYGNQLKTLPKEI--- 285

Query: 198 GLSAVKGYLSE 208
                 GYL E
Sbjct: 286 ------GYLKE 290



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 117/209 (55%), Gaps = 23/209 (11%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQLK LP  IG L  L+ LD++ N L++LPK I   + L++L+   N
Sbjct: 171 GKLQNLQKLDLSGNQLKTLPKEIGKLQNLRELDLNDNQLKTLPKEIGYLKELQDLDLRDN 230

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+ L ++ N++  LP+ +  L +L+ L    N LK+LP+++  L 
Sbjct: 231 QLTTLPNEIG-KLQNLQKLDLSGNQLKTLPKEIGKLQNLQELYLYGNQLKTLPKEIGYLK 289

Query: 128 NLEVLNISQNF----------------------QYLETLPYSIGLLMSLVELDVSYNKIT 165
            L+VL++S N                         L+TLP  IG L  L  LD+S N++ 
Sbjct: 290 ELQVLHLSDNKLTTLPKEIGQLQKLQALLHLGDNQLKTLPKDIGYLKELQLLDLSGNQLK 349

Query: 166 TLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           TLP  IG L+KLQ L L+ N L + P D+
Sbjct: 350 TLPKDIGQLQKLQDLELDSNQLKTLPKDI 378



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 112/179 (62%), Gaps = 3/179 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL++ +NQLK LP  IG L KL+VL++  N L++LPK I   + L+ELN + N
Sbjct: 379 GKLQNLQVLNLSNNQLKTLPKDIGQLQKLRVLELYNNQLKTLPKEIGQLQKLQELNLSHN 438

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  LP  I  +L NL+ L++  N++  LP+ +  L +L+VL+   N L +LP+D+  L 
Sbjct: 439 KLTTLPKDIE-KLQNLQVLNLTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPKDIGKLQ 497

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           NL+ L ++ N   L TLP  I  L +L EL ++ N++TTLP  I  L+ L+ L L+  P
Sbjct: 498 NLQELYLTNN--QLTTLPKDIEKLQNLQELYLTNNQLTTLPKEIRYLKGLEVLHLDDIP 554



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/205 (36%), Positives = 115/205 (56%), Gaps = 25/205 (12%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELN-------- 63
           +V  LD+++NQL  LP  IG L  L+ L++  N L ++PK I   + L+ELN        
Sbjct: 38  DVRYLDLNNNQLTTLPKDIGKLQNLQKLNLYNNQLTTIPKEIGYLKELQELNLSRNQLTT 97

Query: 64  --------------ANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
                          + N+L+ LP  IG +L NL+ L +  N++  LP+ + +L  L+ L
Sbjct: 98  LTLPNKIGQLQKLYLDNNQLKTLPKEIG-KLQNLQELYLTNNQLKTLPKEIGYLKELQDL 156

Query: 110 DARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPD 169
           D R N L +LP ++  L NL+ L++S N   L+TLP  IG L +L ELD++ N++ TLP 
Sbjct: 157 DLRDNQLTTLPNEIGKLQNLQKLDLSGN--QLKTLPKEIGKLQNLRELDLNDNQLKTLPK 214

Query: 170 SIGCLRKLQKLSLEGNPLVSPPMDV 194
            IG L++LQ L L  N L + P ++
Sbjct: 215 EIGYLKELQDLDLRDNQLTTLPNEI 239


>gi|45656721|ref|YP_000807.1| lipoprotein [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
 gi|421102937|ref|ZP_15563539.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599957|gb|AAS69444.1| putative lipoprotein [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|410367252|gb|EKP22638.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
          Length = 521

 Score =  125 bits (313), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/187 (41%), Positives = 115/187 (61%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  N L  LP  +G L  L+ L+++   L +LPK I   R+L+EL+ +FN
Sbjct: 91  GQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFN 150

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP  +G +L NL+ L++N  K+  LP+ +  L +L+ LD   N L +LP+++  L 
Sbjct: 151 SLTTLPKEVG-QLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLE 209

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+  N Q L TLP  IG L +L ELD+S+N +TTLP  +G L  LQ+L L  N L
Sbjct: 210 NLQRLNL--NSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRL 267

Query: 188 VSPPMDV 194
            + PM++
Sbjct: 268 ATLPMEI 274



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/184 (41%), Positives = 113/184 (61%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL +   +L  LP  I  L  LK+LD+  N L +LPK I   R+L+EL+ +FN L 
Sbjct: 48  LDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLT 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  +G +L NL+ L++N  K+  LP+ +  L +L+ LD   N L +LP+++  L NL+
Sbjct: 108 TLPKEVG-QLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+  N Q L TLP  IG L +L ELD+S+N +TTLP  +G L  LQ+L+L    L + 
Sbjct: 167 RLNL--NSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTL 224

Query: 191 PMDV 194
           P ++
Sbjct: 225 PKEI 228



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 116/187 (62%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+H N+L  LP  IG L  L+ LD++ N L +LPK I   R+L+EL+ + N
Sbjct: 252 GQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRN 311

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NLKTL++   ++  LP+ +  L +L+ L+   N L +LP+++  L 
Sbjct: 312 QLTTLPKEIG-QLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQ 370

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NLE+L + +N   +  LP  IG L +L  LD+  N++TTLP  IG L+ LQ+L L+ N L
Sbjct: 371 NLEILVLREN--RITALPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQL 428

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 429 TTLPKEI 435



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 117/200 (58%), Gaps = 4/200 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  LD+H NQL  LP  IG L  LK L++    L +LPK I   ++L+ LN   N+
Sbjct: 299 QLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQ 358

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG EL NL+ L +  N+I  LP+ +  L +L+ LD   N L +LP+++  L N
Sbjct: 359 LTTLPKEIG-ELQNLEILVLRENRITALPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQN 417

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L + +N   L TLP  I  L +L  LD+  N++TTLP  IG L+ LQ+L L+ N L 
Sbjct: 418 LQELCLDEN--QLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLT 475

Query: 189 SPPMDVVE-QGLSAVKGYLS 207
           + P ++ + + L  +  YL+
Sbjct: 476 TFPKEIRQLKNLQELHLYLN 495



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  N L  LP  +G L  L+ LD+  N L +LP  I   ++L+EL+ N N
Sbjct: 229 GQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSN 288

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  LP  I  +L NL+ L ++ N++  LP+ +  L +L+ L+  +  L +LP+++  L 
Sbjct: 289 KLTTLPKEIR-QLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQ 347

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+  N   L TLP  IG L +L  L +  N+IT LP  IG L+ LQ+L L  N L
Sbjct: 348 NLKTLNLLDN--QLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQRLDLHQNQL 405

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 406 TTLPKEI 412



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 111/189 (58%), Gaps = 3/189 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L+++S +L  LP  IG L  L+ LD+S N L +LPK +    +L+ LN N  
Sbjct: 160 GQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQ 219

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  LP  IG +L NL+ L ++ N +  LP+ +  L +L+ LD   N L +LP ++  L 
Sbjct: 220 KLTTLPKEIG-QLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLK 278

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L+++ N   L TLP  I  L +L ELD+  N++TTLP  IG L+ L+ L+L    L
Sbjct: 279 NLQELDLNSN--KLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQL 336

Query: 188 VSPPMDVVE 196
            + P ++ E
Sbjct: 337 TTLPKEIGE 345



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 111/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L+++S +L  LP  IG L  L+ LD+S N L +LPK +    +L+ L+ + N
Sbjct: 206 GQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQN 265

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +N NK+  LP+ +  L +L+ LD   N L +LP+++  L 
Sbjct: 266 RLATLPMEIG-QLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQ 324

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+      L TLP  IG L +L  L++  N++TTLP  IG L+ L+ L L  N +
Sbjct: 325 NLKTLNLI--VTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRI 382

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 383 TALPKEI 389



 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 64/111 (57%), Gaps = 1/111 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+H NQL  LP  IG L  L+ L +  N L +LPK IE  ++L  L+ + N
Sbjct: 390 GQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNN 449

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKS 118
           +L  LP  IG +L NL+ L ++ N++   P+ +  L +L+ L   LN L S
Sbjct: 450 QLTTLPKEIG-QLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 499



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 60/99 (60%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVL      L +LP++++ L NL++L++  N   L  LP  IG L +L 
Sbjct: 40  LTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHN--QLTALPKEIGQLRNLQ 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           ELD+S+N +TTLP  +G L  LQ+L+L    L + P ++
Sbjct: 98  ELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEI 136


>gi|256396794|ref|YP_003118358.1| phosphoprotein phosphatase [Catenulispora acidiphila DSM 44928]
 gi|256363020|gb|ACU76517.1| Phosphoprotein phosphatase [Catenulispora acidiphila DSM 44928]
          Length = 1263

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 96/277 (34%), Positives = 143/277 (51%), Gaps = 21/277 (7%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P S+   + ++  L +  NQL+ LP SIG LS+L+ L +SGN LE LP ++ +   L E
Sbjct: 222 LPTSI-GDMASLTKLYLQKNQLQTLPASIGNLSELQTLALSGNHLEELPASVADLSRLTE 280

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N L  +P+ IG  L +L  LS+  N++  LP SL  L  L  LD   N L  LP+
Sbjct: 281 LNLADNWLTHVPEAIG-RLASLDKLSLTYNRLTELPPSLGALRVLTALDVSRNSLHDLPD 339

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
             + L NL+ LN++QN   L +LP S+G L  L  L ++Y  + TLP  +G L +L+ L 
Sbjct: 340 SFDGLANLDTLNLAQN--PLTSLPSSVGALKRLTWLSLAYCDLETLPAGLGGLHRLETLD 397

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGALRNHRS 241
           L GN L   P  +   GL A        +   + +  + SWV + +      G LRN  +
Sbjct: 398 LVGNNLRDLPFQL--SGLGA--------LTTLNLASNQLSWVPRTL------GLLRNLVN 441

Query: 242 EERERFIMSDF-RAIDGLASPRHIGMFSPRRLFSPRS 277
            +     +S   RA+ GL S R + +   +  + PRS
Sbjct: 442 LDLADNELSSLPRALGGLESLRKLDVAENQLTWIPRS 478



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 72/183 (39%), Positives = 102/183 (55%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           ++V L    N L  LP SIG L +L+ L ++GN L  LP +I +  SL +L    N+L+ 
Sbjct: 185 SLVALSADDNVLTELPPSIGALIRLQELSLTGNRLRKLPTSIGDMASLTKLYLQKNQLQT 244

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +IG  L  L+TL+++ N +  LP S+  L+ L  L+   N L  +PE +  L +L+ 
Sbjct: 245 LPASIG-NLSELQTLALSGNHLEELPASVADLSRLTELNLADNWLTHVPEAIGRLASLDK 303

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L+++ N   L  LP S+G L  L  LDVS N +  LPDS   L  L  L+L  NPL S P
Sbjct: 304 LSLTYN--RLTELPPSLGALRVLTALDVSRNSLHDLPDSFDGLANLDTLNLAQNPLTSLP 361

Query: 192 MDV 194
             V
Sbjct: 362 SSV 364



 Score =  100 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 71/195 (36%), Positives = 105/195 (53%), Gaps = 4/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE++  RL ++  L +  N+L  LP S+G L  L  LDVS N L  LP + +   +L+ 
Sbjct: 291 VPEAI-GRLASLDKLSLTYNRLTELPPSLGALRVLTALDVSRNSLHDLPDSFDGLANLDT 349

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N L  LP ++G  L  L  LS+    +  LP  L  L  L  LD   N L+ LP 
Sbjct: 350 LNLAQNPLTSLPSSVG-ALKRLTWLSLAYCDLETLPAGLGGLHRLETLDLVGNNLRDLPF 408

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L  L  L  LN++ N   L  +P ++GLL +LV LD++ N++++LP ++G L  L+KL 
Sbjct: 409 QLSGLGALTTLNLASN--QLSWVPRTLGLLRNLVNLDLADNELSSLPRALGGLESLRKLD 466

Query: 182 LEGNPLVSPPMDVVE 196
           +  N L   P  V +
Sbjct: 467 VAENQLTWIPRSVCD 481



 Score = 93.6 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 68/189 (35%), Positives = 98/189 (51%), Gaps = 4/189 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A L  +V L +  N L  LP     L +L  L +  N   +LP+ + +  SL +L    N
Sbjct: 90  ALLGGLVELSLTGNGLTTLPEEFARLERLTSLWLDENAFTALPEVVGHLSSLTQLYLQKN 149

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LPD++G    +L TL ++ N +  LP  +    SL  L A  N L  LP  +  LI
Sbjct: 150 QLPGLPDSLGAP--SLHTLVLDGNHLAELPDWIGDTQSLVALSADDNVLTELPPSIGALI 207

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L+++ N   L  LP SIG + SL +L +  N++ TLP SIG L +LQ L+L GN L
Sbjct: 208 RLQELSLTGN--RLRKLPTSIGDMASLTKLYLQKNQLQTLPASIGNLSELQTLALSGNHL 265

Query: 188 VSPPMDVVE 196
              P  V +
Sbjct: 266 EELPASVAD 274



 Score = 81.6 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 68/196 (34%), Positives = 97/196 (49%), Gaps = 5/196 (2%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           V  L++  N+L  LP ++G ++ L+ L +  N    LP  +     L EL+   N L  L
Sbjct: 49  VTFLNLSGNRLATLPETLGEVTGLRRLWLDSNGFGELPPQVALLGGLVELSLTGNGLTTL 108

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P+     L  L +L ++ N    LP+ + HL+SL  L  + N L  LP+ L    +L  L
Sbjct: 109 PEEFA-RLERLTSLWLDENAFTALPEVVGHLSSLTQLYLQKNQLPGLPDSL-GAPSLHTL 166

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
            +  N  +L  LP  IG   SLV L    N +T LP SIG L +LQ+LSL GN L   P 
Sbjct: 167 VLDGN--HLAELPDWIGDTQSLVALSADDNVLTELPPSIGALIRLQELSLTGNRLRKLPT 224

Query: 193 DVVEQGLSAVKGYLSE 208
            + +   S  K YL +
Sbjct: 225 SIGDMA-SLTKLYLQK 239



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 1/122 (0%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  N L+ LP  +  L  L  L+++ N L  +P+T+   R+L  L+   N+L  LP  
Sbjct: 396 LDLVGNNLRDLPFQLSGLGALTTLNLASNQLSWVPRTLGLLRNLVNLDLADNELSSLPRA 455

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           +G  L +L+ L +  N++  +P+S+  L  L  L  R N L  LP      + L+ L++S
Sbjct: 456 LG-GLESLRKLDVAENQLTWIPRSVCDLPKLETLVLRGNRLADLPTSNWQKLTLKELDLS 514

Query: 136 QN 137
            N
Sbjct: 515 DN 516



 Score = 50.4 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 2/93 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P +L   L N+V LD+  N+L  LP ++G L  L+ LDV+ N L  +P+++ +   LE 
Sbjct: 429 VPRTL-GLLRNLVNLDLADNELSSLPRALGGLESLRKLDVAENQLTWIPRSVCDLPKLET 487

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
           L    N+L  LP T  ++ + LK L ++ N ++
Sbjct: 488 LVLRGNRLADLP-TSNWQKLTLKELDLSDNPLL 519



 Score = 43.5 bits (101), Expect = 0.091,   Method: Composition-based stats.
 Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 3/109 (2%)

Query: 100 LTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDV 159
           L  L  +  L+   N L +LPE L  +  L  L +  N      LP  + LL  LVEL +
Sbjct: 43  LPELGPVTFLNLSGNRLATLPETLGEVTGLRRLWLDSN--GFGELPPQVALLGGLVELSL 100

Query: 160 SYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSE 208
           + N +TTLP+    L +L  L L+ N   + P +VV    S  + YL +
Sbjct: 101 TGNGLTTLPEEFARLERLTSLWLDENAFTALP-EVVGHLSSLTQLYLQK 148


>gi|218441805|ref|YP_002380134.1| Miro domain-containing protein [Cyanothece sp. PCC 7424]
 gi|218174533|gb|ACK73266.1| Miro domain protein [Cyanothece sp. PCC 7424]
          Length = 1015

 Score =  124 bits (312), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/208 (39%), Positives = 126/208 (60%), Gaps = 4/208 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+SLT RL+N+  LD+  NQL  LP+S+  L  L  LD+ GN L SLP ++    +L  
Sbjct: 132 LPDSLT-RLVNLTYLDLRGNQLTSLPDSLTRLVNLTYLDLRGNQLTSLPDSLTRLVNLIY 190

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+L  L +++   L+NL  L ++ N++  LP SLT L +L  LD   N L S P+
Sbjct: 191 LYLGRNQLSSLLNSLT-RLVNLTELDLSFNQLTSLPDSLTPLVNLTELDLSDNQLSSFPD 249

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L +L+NL  L ++ N   L +LP S+  L  L  L++S N+++ LPDS+  L  L  L 
Sbjct: 250 SLTSLVNLTELYLTGN--QLSSLPDSLTRLAKLSRLNLSRNQLSNLPDSLTRLVNLTYLY 307

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEK 209
           L+GNPL +PP+++ +QG+ A++ Y  +K
Sbjct: 308 LKGNPLETPPLEIAQQGIEAIREYFRQK 335



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 75/182 (41%), Positives = 110/182 (60%), Gaps = 3/182 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L+N+  L ++ N L  L N I  L  L  LD+S N L SLP ++ +  +L +L+ +FN+L
Sbjct: 70  LINLKELYLYCNNLTILSNHITDLVNLTKLDLSHNQLTSLPDSLTHLVNLTKLDLSFNQL 129

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LPD++   L+NL  L +  N++  LP SLT L +L  LD R N L SLP+ L  L+NL
Sbjct: 130 TSLPDSLT-RLVNLTYLDLRGNQLTSLPDSLTRLVNLTYLDLRGNQLTSLPDSLTRLVNL 188

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
             L + +N   L +L  S+  L++L ELD+S+N++T+LPDS+  L  L +L L  N L S
Sbjct: 189 IYLYLGRN--QLSSLLNSLTRLVNLTELDLSFNQLTSLPDSLTPLVNLTELDLSDNQLSS 246

Query: 190 PP 191
            P
Sbjct: 247 FP 248



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/168 (37%), Positives = 94/168 (55%), Gaps = 3/168 (1%)

Query: 22  QLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELI 81
           +L  +P  +  L  L+VL ++ N L  + + I    +L+EL    N L  L + I  +L+
Sbjct: 36  KLTEIPEEVFELEWLEVLYLNYNNLSCISEYIYCLINLKELYLYCNNLTILSNHIT-DLV 94

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL  L ++ N++  LP SLTHL +L  LD   N L SLP+ L  L+NL  L++  N   L
Sbjct: 95  NLTKLDLSHNQLTSLPDSLTHLVNLTKLDLSFNQLTSLPDSLTRLVNLTYLDLRGN--QL 152

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
            +LP S+  L++L  LD+  N++T+LPDS+  L  L  L L  N L S
Sbjct: 153 TSLPDSLTRLVNLTYLDLRGNQLTSLPDSLTRLVNLIYLYLGRNQLSS 200



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/100 (38%), Positives = 55/100 (55%), Gaps = 2/100 (2%)

Query: 92  KIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLL 151
           K+  +P+ +  L  L VL    N L  + E +  LINL+ L +  N   L  L   I  L
Sbjct: 36  KLTEIPEEVFELEWLEVLYLNYNNLSCISEYIYCLINLKELYLYCN--NLTILSNHITDL 93

Query: 152 MSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           ++L +LD+S+N++T+LPDS+  L  L KL L  N L S P
Sbjct: 94  VNLTKLDLSHNQLTSLPDSLTHLVNLTKLDLSFNQLTSLP 133


>gi|434403391|ref|YP_007146276.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
           stagnale PCC 7417]
 gi|428257646|gb|AFZ23596.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
           stagnale PCC 7417]
          Length = 938

 Score =  124 bits (312), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 123/207 (59%), Gaps = 4/207 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+++ A+L N+  L++  N++  LP++I  L  L  L++S N + +LP  I    +L  
Sbjct: 109 LPDAI-AKLHNLTTLNLSVNKITTLPDAIAKLHNLTTLNLSVNRIRTLPDAIAKLHNLTS 167

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN N N++  LPD I  +L NL +L ++ N+I  LP ++  L +L  L    N + +LP+
Sbjct: 168 LNLNGNRITTLPDAIA-KLHNLTSLDLSGNRITTLPDAIAKLHNLTSLSLWNNGITTLPD 226

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L NL  L++S N   + TLP +I  L +L  LD+  N+ITTLPD+I  L  L  L 
Sbjct: 227 AIAKLHNLTSLDLSGN--RITTLPDAIAKLQNLSTLDLRGNEITTLPDAIAQLHNLTSLD 284

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSE 208
           L  NP+  PP++VV++G+ A++ Y  +
Sbjct: 285 LRRNPIEKPPLEVVKKGIEAIRDYFRQ 311



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/176 (38%), Positives = 105/176 (59%), Gaps = 3/176 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  N++  LP++I  L  L  L +S N + +LP  I   ++L  L+ ++N +  LPD 
Sbjct: 53  LDLSRNEMTTLPDAIAKLQNLSTLYLSHNGITTLPDAIAQLQNLNSLDLSYNGITTLPDA 112

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           I  +L NL TL+++ NKI  LP ++  L +L  L+  +N +++LP+ +  L NL  LN++
Sbjct: 113 IA-KLHNLTTLNLSVNKITTLPDAIAKLHNLTTLNLSVNRIRTLPDAIAKLHNLTSLNLN 171

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            N   + TLP +I  L +L  LD+S N+ITTLPD+I  L  L  LSL  N + + P
Sbjct: 172 GN--RITTLPDAIAKLHNLTSLDLSGNRITTLPDAIAKLHNLTSLSLWNNGITTLP 225



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 98/171 (57%), Gaps = 3/171 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           ++L  +P  +  L+ L+ LD+S N + +LP  I   ++L  L  + N +  LPD I  +L
Sbjct: 35  DKLTEIPAEVFALTWLEELDLSRNEMTTLPDAIAKLQNLSTLYLSHNGITTLPDAIA-QL 93

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            NL +L ++ N I  LP ++  L +L  L+  +N + +LP+ +  L NL  LN+S N   
Sbjct: 94  QNLNSLDLSYNGITTLPDAIAKLHNLTTLNLSVNKITTLPDAIAKLHNLTTLNLSVN--R 151

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           + TLP +I  L +L  L+++ N+ITTLPD+I  L  L  L L GN + + P
Sbjct: 152 IRTLPDAIAKLHNLTSLNLNGNRITTLPDAIAKLHNLTSLDLSGNRITTLP 202



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 1/57 (1%)

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQ 197
           L  +P  +  L  L ELD+S N++TTLPD+I  L+ L  L L  N + + P D + Q
Sbjct: 37  LTEIPAEVFALTWLEELDLSRNEMTTLPDAIAKLQNLSTLYLSHNGITTLP-DAIAQ 92


>gi|421090489|ref|ZP_15551281.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410000703|gb|EKO51331.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 448

 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/187 (43%), Positives = 117/187 (62%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L ++ NQL  LPN IG L  L+VLD+  N L  LPK I   ++L+ LN  FN
Sbjct: 68  GKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LPD +G +L NL+ L+++ NK+ ILP+ +  L +L+VL+  LN L  LPE +  L 
Sbjct: 128 RLTILPDEVG-QLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQ 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++LN SQ  Q L T P  IG L  L EL++ +N++TTL + +  L+ LQ L L  NPL
Sbjct: 187 NLQILN-SQGNQ-LTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPL 244

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 245 TTLPKEI 251



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 114/209 (54%), Gaps = 22/209 (10%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +LD+ SN L  LP  IG L KL+ L++ G  L++LP+ I   ++L  LN N+ 
Sbjct: 229 VQLQNLQILDLISNPLTTLPKEIGQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNYT 288

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP  IG +L  L+ L +  N++  LP+ +  L  L+ L    N L++LP+++E L 
Sbjct: 289 HLTILPKEIG-QLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQ 347

Query: 128 NLEVLNISQN---------------------FQYLETLPYSIGLLMSLVELDVSYNKITT 166
            L+ L +  N                     F  L TLP  IG L +L EL++ +N++ T
Sbjct: 348 KLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQLAT 407

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
           LP  +G L+KL+KL+L  NP+ S  ++ +
Sbjct: 408 LPKEVGQLQKLRKLNLYNNPIASEKIERI 436



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/158 (39%), Positives = 101/158 (63%), Gaps = 3/158 (1%)

Query: 37  KVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVIL 96
           ++L++SG+ L +L K I   ++L++L  N+N+L  LP+ IG +L NL+ L +  N++ IL
Sbjct: 51  RILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIG-QLQNLQVLDLYSNELTIL 109

Query: 97  PQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVE 156
           P+ +  L +L+VL+   N L  LP+++  L NL+VLN+  N   L  LP  IG L +L  
Sbjct: 110 PKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLN--KLTILPEKIGQLQNLQV 167

Query: 157 LDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L++  NK+T LP+ IG L+ LQ L+ +GN L + P ++
Sbjct: 168 LNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEI 205



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 70/182 (38%), Positives = 107/182 (58%), Gaps = 3/182 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +L++  ++L  L   IG L  L+ L ++ N L +LP  I   ++L+ L+   N+L  LP 
Sbjct: 52  ILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPK 111

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            IG +L NL+ L++  N++ ILP  +  L +L+VL+  LN L  LPE +  L NL+VLN+
Sbjct: 112 EIG-KLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNL 170

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N   L  LP  IG L +L  L+   N++TT P  IG L+KLQ+L+L  N L +   +V
Sbjct: 171 DLN--KLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEV 228

Query: 195 VE 196
           V+
Sbjct: 229 VQ 230



 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 3/115 (2%)

Query: 81  INLKTLSINCNK-IVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           +N ++++I  NK + IL   +     L+         ++L E L+N  +  +LN+S +  
Sbjct: 1   MNFQSINIRLNKRLTILLILICFSCKLQAQSKETQTYRNLTEALQNPKDARILNLSGS-- 58

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L TL   IG L +L +L ++YN++TTLP+ IG L+ LQ L L  N L   P ++
Sbjct: 59  KLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEI 113


>gi|418687360|ref|ZP_13248519.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410737684|gb|EKQ82423.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 402

 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/187 (43%), Positives = 117/187 (62%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L ++ NQL  LPN IG L  L+VLD+  N L  LPK I   ++L+ LN  FN
Sbjct: 68  GKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LPD +G +L NL+ L+++ NK+ ILP+ +  L +L+VL+  LN L  LPE +  L 
Sbjct: 128 RLTILPDEVG-QLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQ 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++LN SQ  Q L T P  IG L  L EL++ +N++TTL + +  L+ LQ L L  NPL
Sbjct: 187 NLQILN-SQGNQ-LTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPL 244

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 245 TTLPKEI 251



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 119/239 (49%), Gaps = 46/239 (19%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++PE +  +L N+ VL++  N+L  LP  IG L  L++L+  GN L + PK I   + L+
Sbjct: 154 ILPEKI-GQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQ 212

Query: 61  ELNANFNKLRQL-----------------------PDTIGFELINLKTLSINCNKIVILP 97
           ELN  FN+L  L                       P  IG +L  L+ L +  N++  LP
Sbjct: 213 ELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIG-QLSKLQKLYLYGNQLTTLP 271

Query: 98  QSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN-------------------- 137
           + +  L  L+ L    N L++LP+++E L  L+ L +  N                    
Sbjct: 272 EEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNL 331

Query: 138 -FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            F  L TLP  IG L +L EL++ +N++ TLP  +G L+KL+KL+L  NP+ S  ++ +
Sbjct: 332 GFNQLTTLPQEIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNNPIASEKIERI 390



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/158 (39%), Positives = 101/158 (63%), Gaps = 3/158 (1%)

Query: 37  KVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVIL 96
           ++L++SG+ L +L K I   ++L++L  N+N+L  LP+ IG +L NL+ L +  N++ IL
Sbjct: 51  RILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIG-QLQNLQVLDLYSNELTIL 109

Query: 97  PQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVE 156
           P+ +  L +L+VL+   N L  LP+++  L NL+VLN+  N   L  LP  IG L +L  
Sbjct: 110 PKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLN--KLTILPEKIGQLQNLQV 167

Query: 157 LDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L++  NK+T LP+ IG L+ LQ L+ +GN L + P ++
Sbjct: 168 LNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEI 205



 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 3/115 (2%)

Query: 81  INLKTLSINCNK-IVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           +N ++++I  NK + IL   +     L+         ++L E L+N  +  +LN+S +  
Sbjct: 1   MNFQSINIRLNKRLTILLILICFSCKLQAQSKETQTYRNLTEALQNPKDARILNLSGS-- 58

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L TL   IG L +L +L ++YN++TTLP+ IG L+ LQ L L  N L   P ++
Sbjct: 59  KLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEI 113


>gi|418753822|ref|ZP_13310061.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           MOR084]
 gi|409965822|gb|EKO33680.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           MOR084]
          Length = 326

 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 79/187 (42%), Positives = 118/187 (63%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L+++SNQ   LP  IG L KL+ L ++ + L +LPK I N ++L+ELN N N
Sbjct: 62  GNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSN 121

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP+ IG  L  L+TL +N +++  LP+ +  L  L+ L+   N LK+LP+++  L 
Sbjct: 122 QFTTLPEEIG-NLQKLQTLDLNYSRLTTLPKEIGKLQKLQKLNLYKNQLKTLPKEIGKLQ 180

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+  N+S N   L TLP  IG L +L EL +  N++TTLP+ IG L+KLQ+LSL GN L
Sbjct: 181 NLK--NLSLNGNELTTLPKEIGNLQNLQELSLGSNQLTTLPEKIGNLQKLQELSLAGNRL 238

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 239 KTLPKEI 245



 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 112/179 (62%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  N+L  LP  IG L KL+ LD++ N L++LPK IE  + LE L+   N+L  LP  
Sbjct: 1   LDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKE 60

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L NL+ L++N N+   LP+ + +L  L+ L    + L +LP+++ NL NL+ LN++
Sbjct: 61  IG-NLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLN 119

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N     TLP  IG L  L  LD++Y+++TTLP  IG L+KLQKL+L  N L + P ++
Sbjct: 120 SN--QFTTLPEEIGNLQKLQTLDLNYSRLTTLPKEIGKLQKLQKLNLYKNQLKTLPKEI 176



 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 111/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L  +  LD+  NQLK LP  I  L KL+ L +  N L +LPK I N ++L+ELN N N
Sbjct: 16  GNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSN 75

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP+ IG  L  L+ LS+  +++  LP+ + +L +L+ L+   N   +LPE++ NL 
Sbjct: 76  QFTTLPEEIG-NLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQ 134

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L++  N+  L TLP  IG L  L +L++  N++ TLP  IG L+ L+ LSL GN L
Sbjct: 135 KLQTLDL--NYSRLTTLPKEIGKLQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNEL 192

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 193 TTLPKEI 199



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/218 (35%), Positives = 119/218 (54%), Gaps = 26/218 (11%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L+++SNQ   LP  IG L KL+ LD++ + L +LPK I   + L++LN   N
Sbjct: 108 GNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLNYSRLTTLPKEIGKLQKLQKLNLYKN 167

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG +L NLK LS+N N++  LP+ + +L +L+ L    N L +LPE + NL 
Sbjct: 168 QLKTLPKEIG-KLQNLKNLSLNGNELTTLPKEIGNLQNLQELSLGSNQLTTLPEKIGNLQ 226

Query: 128 NLEVLNISQNFQYLETLPYSIGL-----------------------LMSLVELDVSYNKI 164
            L+ L+++ N   L+TLP  IG                        L SL  L++S N +
Sbjct: 227 KLQELSLAGN--RLKTLPKEIGNLQNLQELNLNNNQLTTLPKEIENLQSLESLNLSGNSL 284

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAV 202
            + P+ IG L+KL+ L L GNP +    + +++ L  V
Sbjct: 285 ISFPEEIGKLQKLKWLYLGGNPFLRSQKEKIQKLLPNV 322


>gi|418755378|ref|ZP_13311585.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964389|gb|EKO32279.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 277

 Score =  123 bits (309), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 80/187 (42%), Positives = 111/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  LD+ SNQL   P  IG L +LK L +  N   +LPK I   R LE LN + N
Sbjct: 80  GRLQNLEELDLTSNQLAKFPQEIGTLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSNN 139

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L +LK L ++ N++  LPQ +  L +L+ LD   N L +LP+++  L 
Sbjct: 140 QLTTLPNEIG-KLRSLKRLYLSNNQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEIGKLR 198

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NLE L++  N   L  LP  IG L  L EL++S N++ +LP  IG LRKL+KL L  N L
Sbjct: 199 NLEWLDLGSN--QLGNLPQEIGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQL 256

Query: 188 VSPPMDV 194
           V  P ++
Sbjct: 257 VKLPQEI 263



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 70/134 (52%), Gaps = 7/134 (5%)

Query: 62  LNANFNKLRQLPDTIGFELINLKTLS-INCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           LN     L  LP  IG     L+ L  ++  K+  LP+ +  L +L  LD   N L   P
Sbjct: 44  LNLGHYPLTSLPQEIG----TLQRLERLDLEKLTTLPKEIGRLQNLEELDLTSNQLAKFP 99

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++  L  L+ L++  N     TLP  IG L  L  L++S N++TTLP+ IG LR L++L
Sbjct: 100 QEIGTLQRLKWLSLESN--QFATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLKRL 157

Query: 181 SLEGNPLVSPPMDV 194
            L  N L S P ++
Sbjct: 158 YLSNNQLTSLPQEI 171



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/70 (48%), Positives = 44/70 (62%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+ SNQL  LP  IG L KL  L++SGN L SLP+ I   R LE+L+   N
Sbjct: 195 GKLRNLEWLDLGSNQLGNLPQEIGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSN 254

Query: 68  KLRQLPDTIG 77
           +L +LP  IG
Sbjct: 255 QLVKLPQEIG 264



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 4/97 (4%)

Query: 98  QSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVEL 157
           ++L +   +R+L+     L SLP+++  L  LE L++ +    L TLP  IG L +L EL
Sbjct: 33  EALKNPMDVRILNLGHYPLTSLPQEIGTLQRLERLDLEK----LTTLPKEIGRLQNLEEL 88

Query: 158 DVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           D++ N++   P  IG L++L+ LSLE N   + P ++
Sbjct: 89  DLTSNQLAKFPQEIGTLQRLKWLSLESNQFATLPKEI 125



 Score = 37.0 bits (84), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +P+ +  +L  +  L++  NQL+ LP  IG L KL+ LD++ N L  LP+ I   + L
Sbjct: 213 LPQEI-GKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQLVKLPQEIGTLQRL 269


>gi|418744841|ref|ZP_13301186.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794172|gb|EKR92082.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 485

 Score =  123 bits (309), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 79/187 (42%), Positives = 118/187 (63%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L+++SNQ   LP  IG L KL+ L ++ + L +LPK I N ++L+ELN N N
Sbjct: 221 GNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSN 280

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP+ IG  L  L+TL +N +++  LP+ +  L  L+ L+   N LK+LP+++  L 
Sbjct: 281 QFTTLPEEIG-NLQKLQTLDLNYSRLTTLPKEIGKLQKLQKLNLYKNQLKTLPKEIGKLQ 339

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+  N+S N   L TLP  IG L +L EL +  N++TTLP+ IG L+KLQ+LSL GN L
Sbjct: 340 NLK--NLSLNGNELTTLPKEIGNLQNLQELSLGSNQLTTLPEKIGNLQKLQELSLAGNRL 397

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 398 KTLPKEI 404



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/193 (40%), Positives = 118/193 (61%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +   L  +  LD+  N+L  LP  IG L KL+ LD++ N L++LPK IE  + LE 
Sbjct: 147 LPEEI-GNLQKLQTLDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEA 205

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+L  LP  IG  L NL+ L++N N+   LP+ + +L  L+ L    + L +LP+
Sbjct: 206 LHLGNNELTTLPKEIG-NLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPK 264

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++ NL NL+ LN++ N     TLP  IG L  L  LD++Y+++TTLP  IG L+KLQKL+
Sbjct: 265 EIGNLQNLQELNLNSN--QFTTLPEEIGNLQKLQTLDLNYSRLTTLPKEIGKLQKLQKLN 322

Query: 182 LEGNPLVSPPMDV 194
           L  N L + P ++
Sbjct: 323 LYKNQLKTLPKEI 335



 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 111/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L  +  LD+  NQLK LP  I  L KL+ L +  N L +LPK I N ++L+ELN N N
Sbjct: 175 GNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSN 234

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP+ IG  L  L+ LS+  +++  LP+ + +L +L+ L+   N   +LPE++ NL 
Sbjct: 235 QFTTLPEEIG-NLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQ 293

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L++  N+  L TLP  IG L  L +L++  N++ TLP  IG L+ L+ LSL GN L
Sbjct: 294 KLQTLDL--NYSRLTTLPKEIGKLQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNEL 351

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 352 TTLPKEI 358



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 106/165 (64%), Gaps = 7/165 (4%)

Query: 34  SKLKVLDVS----GNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSIN 89
           + ++VLD+     GN L +LPK I N ++L+ELN   N+L  LP+ IG  L  L+TL ++
Sbjct: 105 TDVRVLDLGPPEGGNKLTTLPKEIGNLQNLQELNLEGNQLTTLPEEIG-NLQKLQTLDLS 163

Query: 90  CNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIG 149
            N++  LP+ + +L  L+ LD   N LK+LP+++E L  LE L++  N   L TLP  IG
Sbjct: 164 HNRLTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNN--ELTTLPKEIG 221

Query: 150 LLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L +L EL+++ N+ TTLP+ IG L+KLQKLSL  + L + P ++
Sbjct: 222 NLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEI 266



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 109/187 (58%), Gaps = 7/187 (3%)

Query: 12  NVVVLDVH----SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +V VLD+      N+L  LP  IG L  L+ L++ GN L +LP+ I N + L+ L+ + N
Sbjct: 106 DVRVLDLGPPEGGNKLTTLPKEIGNLQNLQELNLEGNQLTTLPEEIGNLQKLQTLDLSHN 165

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG  L  L+TL +  N++  LP+ +  L  L  L    N L +LP+++ NL 
Sbjct: 166 RLTTLPKEIG-NLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQ 224

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN++ N     TLP  IG L  L +L ++++++TTLP  IG L+ LQ+L+L  N  
Sbjct: 225 NLQELNLNSN--QFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQF 282

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 283 TTLPEEI 289



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/218 (35%), Positives = 119/218 (54%), Gaps = 26/218 (11%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L+++SNQ   LP  IG L KL+ LD++ + L +LPK I   + L++LN   N
Sbjct: 267 GNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLNYSRLTTLPKEIGKLQKLQKLNLYKN 326

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG +L NLK LS+N N++  LP+ + +L +L+ L    N L +LPE + NL 
Sbjct: 327 QLKTLPKEIG-KLQNLKNLSLNGNELTTLPKEIGNLQNLQELSLGSNQLTTLPEKIGNLQ 385

Query: 128 NLEVLNISQNFQYLETLPYSIGL-----------------------LMSLVELDVSYNKI 164
            L+ L+++ N   L+TLP  IG                        L SL  L++S N +
Sbjct: 386 KLQELSLAGN--RLKTLPKEIGNLQNLQELNLNNNQLTTLPKEIENLQSLESLNLSGNSL 443

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAV 202
            + P+ IG L+KL+ L L GNP +    + +++ L  V
Sbjct: 444 ISFPEEIGKLQKLKWLYLGGNPFLRSQKEKIQKLLPNV 481



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 21/104 (20%)

Query: 91  NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL 150
           +K   L ++L H T +RVLD                     L   +    L TLP  IG 
Sbjct: 92  DKYYNLTEALQHPTDVRVLD---------------------LGPPEGGNKLTTLPKEIGN 130

Query: 151 LMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L +L EL++  N++TTLP+ IG L+KLQ L L  N L + P ++
Sbjct: 131 LQNLQELNLEGNQLTTLPEEIGNLQKLQTLDLSHNRLTTLPKEI 174


>gi|418744910|ref|ZP_13301255.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794241|gb|EKR92151.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 281

 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/187 (42%), Positives = 111/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  LD+ SNQL   P  IG L +LK L +  N   +LPK I   R LE LN + N
Sbjct: 80  GRLQNLEELDLTSNQLAKFPQEIGTLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSNN 139

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L +LK L ++ N++  LPQ +  L +L+ LD   N L +LP+++  L 
Sbjct: 140 QLTTLPNEIG-KLRSLKRLYLSNNQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEIGKLR 198

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NLE L++  N   L  LP  IG L  L EL++S N++ +LP  IG LRKL+KL L  N L
Sbjct: 199 NLEWLDLGSN--QLGNLPQEIGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQL 256

Query: 188 VSPPMDV 194
           V  P ++
Sbjct: 257 VKLPQEI 263



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 70/134 (52%), Gaps = 7/134 (5%)

Query: 62  LNANFNKLRQLPDTIGFELINLKTLS-INCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           LN     L  LP  IG     L+ L  ++  K+  LP+ +  L +L  LD   N L   P
Sbjct: 44  LNLGHYPLTSLPQEIG----TLQRLERLDLEKLTTLPKEIGRLQNLEELDLTSNQLAKFP 99

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++  L  L+ L++  N     TLP  IG L  L  L++S N++TTLP+ IG LR L++L
Sbjct: 100 QEIGTLQRLKWLSLESN--QFATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLKRL 157

Query: 181 SLEGNPLVSPPMDV 194
            L  N L S P ++
Sbjct: 158 YLSNNQLTSLPQEI 171



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/70 (48%), Positives = 44/70 (62%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+ SNQL  LP  IG L KL  L++SGN L SLP+ I   R LE+L+   N
Sbjct: 195 GKLRNLEWLDLGSNQLGNLPQEIGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSN 254

Query: 68  KLRQLPDTIG 77
           +L +LP  IG
Sbjct: 255 QLVKLPQEIG 264



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 4/97 (4%)

Query: 98  QSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVEL 157
           ++L +   +R+L+     L SLP+++  L  LE L++ +    L TLP  IG L +L EL
Sbjct: 33  EALKNPMDVRILNLGHYPLTSLPQEIGTLQRLERLDLEK----LTTLPKEIGRLQNLEEL 88

Query: 158 DVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           D++ N++   P  IG L++L+ LSLE N   + P ++
Sbjct: 89  DLTSNQLAKFPQEIGTLQRLKWLSLESNQFATLPKEI 125


>gi|124010573|ref|ZP_01695196.1| leucine-rich repeat-containing protein 1 [Microscilla marina ATCC
           23134]
 gi|123982251|gb|EAY23831.1| leucine-rich repeat-containing protein 1 [Microscilla marina ATCC
           23134]
          Length = 519

 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/190 (42%), Positives = 118/190 (62%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ L  +L  +  LD+++N+LK +P  +G L+ LK LD+S N L++LP+ + N ++LE+
Sbjct: 269 LPKEL-GKLKQLEQLDLYNNRLKTVPKELGKLTALKKLDLSRNRLQNLPQELTNAQALEK 327

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N L QLP  +G  L  LK L+++ N++V LP+SL  L +L  LD R N LK LPE
Sbjct: 328 LNLRGNALTQLPKNLG-NLQQLKRLNLDANRLVGLPESLGKLKNLESLDLRENALKKLPE 386

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L  L  L+ L + +N   L  LP SIG L +L  LD   N +  LP+SIG L+KL+K++
Sbjct: 387 SLGGLEKLKNLQLRKN--ALTKLPESIGKLQNLESLDSWGNALEGLPESIGGLKKLKKMN 444

Query: 182 LEGNPLVSPP 191
           L  N L   P
Sbjct: 445 LAYNQLTELP 454



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 111/190 (58%), Gaps = 3/190 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP     +L N+ VL +++N L+ LP  +G L  LK L +  NLL+++PK I + + L++
Sbjct: 199 IPVQKLKKLKNLEVLKLNNNALRTLPKELGSLKSLKELHLQNNLLKTVPKEIGDLQQLKK 258

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N++  LP  +G +L  L+ L +  N++  +P+ L  LT+L+ LD   N L++LP+
Sbjct: 259 LNLKMNRVEGLPKELG-KLKQLEQLDLYNNRLKTVPKELGKLTALKKLDLSRNRLQNLPQ 317

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L N   LE LN+  N   L  LP ++G L  L  L++  N++  LP+S+G L+ L+ L 
Sbjct: 318 ELTNAQALEKLNLRGN--ALTQLPKNLGNLQQLKRLNLDANRLVGLPESLGKLKNLESLD 375

Query: 182 LEGNPLVSPP 191
           L  N L   P
Sbjct: 376 LRENALKKLP 385



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 112/228 (49%), Gaps = 37/228 (16%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  +L ++  L++  NQ+K LP  I  L+KLK L++ GN ++ LP  +     L  
Sbjct: 96  LPEFL-FKLRHLHTLNLAHNQIKELPTGIARLNKLKYLNIVGNPIKKLPAELTQLSQLAT 154

Query: 62  LNAN----------------------------------FNKLRQLPDTIGFELINLKTLS 87
           L A+                                   + LRQ+P     +L NL+ L 
Sbjct: 155 LKADKKLLVQWEMLRKKNKLFTNLEEALKTPAQVYKLELHSLRQIPVQKLKKLKNLEVLK 214

Query: 88  INCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYS 147
           +N N +  LP+ L  L SL+ L  + N LK++P+++ +L  L+ LN+  N   +E LP  
Sbjct: 215 LNNNALRTLPKELGSLKSLKELHLQNNLLKTVPKEIGDLQQLKKLNLKMN--RVEGLPKE 272

Query: 148 IGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
           +G L  L +LD+  N++ T+P  +G L  L+KL L  N L + P ++ 
Sbjct: 273 LGKLKQLEQLDLYNNRLKTVPKELGKLTALKKLDLSRNRLQNLPQELT 320



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 104/214 (48%), Gaps = 38/214 (17%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  +QL  + + +  L+ L+++D+S N L  LP+ +   R L  LN   N++++LP  
Sbjct: 63  LKLAQDQLDSINSEVTALTNLQIVDLSHNQLGKLPEFLFKLRHLHTLNLAHNQIKELPTG 122

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDA------------------------ 111
           I   L  LK L+I  N I  LP  LT L+ L  L A                        
Sbjct: 123 IA-RLNKLKYLNIVGNPIKKLPAELTQLSQLATLKADKKLLVQWEMLRKKNKLFTNLEEA 181

Query: 112 ----------RLNCLKSLP-EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVS 160
                      L+ L+ +P + L+ L NLEVL ++ N   L TLP  +G L SL EL + 
Sbjct: 182 LKTPAQVYKLELHSLRQIPVQKLKKLKNLEVLKLNNN--ALRTLPKELGSLKSLKELHLQ 239

Query: 161 YNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N + T+P  IG L++L+KL+L+ N +   P ++
Sbjct: 240 NNLLKTVPKEIGDLQQLKKLNLKMNRVEGLPKEL 273



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 72/116 (62%), Gaps = 3/116 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PESL   L  +  L +  N L  LP SIG L  L+ LD  GN LE LP++I   + L++
Sbjct: 384 LPESLGG-LEKLKNLQLRKNALTKLPESIGKLQNLESLDSWGNALEGLPESIGGLKKLKK 442

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSI-NCNKIVILPQSLTHLTSLRVLDARLNCL 116
           +N  +N+L +LP+++G +L NL+TL++ N + +  LP+SL +L +L+    + + L
Sbjct: 443 MNLAYNQLTELPESLG-KLENLQTLNLWNNSTLQKLPKSLGNLKNLQSFKMQFDKL 497



 Score = 40.4 bits (93), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 72/159 (45%), Gaps = 26/159 (16%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           +K+  LD+SG  L+++ + I     L+EL    ++L    D+I  E+             
Sbjct: 35  TKVYRLDLSGQKLKAISRNIHVFTRLQELKLAQDQL----DSINSEV------------- 77

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
                  T LT+L+++D   N L  LPE L  L +L  LN++ N   ++ LP  I  L  
Sbjct: 78  -------TALTNLQIVDLSHNQLGKLPEFLFKLRHLHTLNLAHN--QIKELPTGIARLNK 128

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
           L  L++  N I  LP  +  L +L  L  +   LV   M
Sbjct: 129 LKYLNIVGNPIKKLPAELTQLSQLATLKADKKLLVQWEM 167


>gi|113477255|ref|YP_723316.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
 gi|110168303|gb|ABG52843.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
          Length = 1041

 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/208 (39%), Positives = 124/208 (59%), Gaps = 4/208 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+T +L N+  LD+  N+L  LP SI  LS L  L +  N L SLP++I    +L  
Sbjct: 202 LPESIT-KLSNLTSLDLSWNKLTSLPESITKLSNLTSLYLGSNQLTSLPESITTLSNLTV 260

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+L  +P++I  +L NL  L ++ N++  LP+S+T L++L  LD R N L  LPE
Sbjct: 261 LDLGSNQLTSMPESIT-KLSNLTELYLDGNQLTRLPESITKLSNLTKLDLRNNQLTRLPE 319

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L NL  LN+S N   L +LP SIG L +L  L +  N++T LP+SI  L  L  L 
Sbjct: 320 SITKLSNLTKLNLSWN--KLTSLPESIGKLSNLTSLYLRDNQLTILPESITTLSNLGWLY 377

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEK 209
           L  NPL +PP+++  +G+  ++ Y  ++
Sbjct: 378 LNNNPLENPPIEIATKGIQEIRDYFQQE 405



 Score =  114 bits (286), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/195 (41%), Positives = 115/195 (58%), Gaps = 4/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+T +L N+  L +  N+L  LP SIG LS L  LD+ GN L SLP++I    +L E
Sbjct: 110 LPESIT-KLSNLTELYLSVNKLTSLPESIGKLSNLTSLDLGGNQLTSLPESITKLSNLTE 168

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+L  LP++I  +L NL  L +  N++  LP+S+T L++L  LD   N L SLPE
Sbjct: 169 LYLGHNQLTSLPESIT-KLSNLTELYLGHNQLTSLPESITKLSNLTSLDLSWNKLTSLPE 227

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L NL  L +  N   L +LP SI  L +L  LD+  N++T++P+SI  L  L +L 
Sbjct: 228 SITKLSNLTSLYLGSN--QLTSLPESITTLSNLTVLDLGSNQLTSMPESITKLSNLTELY 285

Query: 182 LEGNPLVSPPMDVVE 196
           L+GN L   P  + +
Sbjct: 286 LDGNQLTRLPESITK 300



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 81/194 (41%), Positives = 114/194 (58%), Gaps = 4/194 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+  +L N+  L + +N+L  LP SI  LS L  L + GN L SLP++I    +L E
Sbjct: 64  LPESI-GKLSNLTSLYLVNNKLTSLPESITKLSNLTELYLDGNQLTSLPESITKLSNLTE 122

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + NKL  LP++IG +L NL +L +  N++  LP+S+T L++L  L    N L SLPE
Sbjct: 123 LYLSVNKLTSLPESIG-KLSNLTSLDLGGNQLTSLPESITKLSNLTELYLGHNQLTSLPE 181

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L NL  L +  N   L +LP SI  L +L  LD+S+NK+T+LP+SI  L  L  L 
Sbjct: 182 SITKLSNLTELYLGHN--QLTSLPESITKLSNLTSLDLSWNKLTSLPESITKLSNLTSLY 239

Query: 182 LEGNPLVSPPMDVV 195
           L  N L S P  + 
Sbjct: 240 LGSNQLTSLPESIT 253



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/182 (41%), Positives = 106/182 (58%), Gaps = 3/182 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           VLD+ SN+L  LP SIG LS L  L +  N L SLP++I    +L EL  + N+L  LP+
Sbjct: 53  VLDLGSNELTSLPESIGKLSNLTSLYLVNNKLTSLPESITKLSNLTELYLDGNQLTSLPE 112

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
           +I  +L NL  L ++ NK+  LP+S+  L++L  LD   N L SLPE +  L NL  L +
Sbjct: 113 SIT-KLSNLTELYLSVNKLTSLPESIGKLSNLTSLDLGGNQLTSLPESITKLSNLTELYL 171

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N   L +LP SI  L +L EL + +N++T+LP+SI  L  L  L L  N L S P  +
Sbjct: 172 GHN--QLTSLPESITKLSNLTELYLGHNQLTSLPESITKLSNLTSLDLSWNKLTSLPESI 229

Query: 195 VE 196
            +
Sbjct: 230 TK 231



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 67/175 (38%), Positives = 102/175 (58%), Gaps = 3/175 (1%)

Query: 22  QLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELI 81
           +L  +P  +  L +L+VLD+  N L SLP++I    +L  L    NKL  LP++I  +L 
Sbjct: 37  KLTEVPGDVWELEQLEVLDLGSNELTSLPESIGKLSNLTSLYLVNNKLTSLPESIT-KLS 95

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL  L ++ N++  LP+S+T L++L  L   +N L SLPE +  L NL  L++  N   L
Sbjct: 96  NLTELYLDGNQLTSLPESITKLSNLTELYLSVNKLTSLPESIGKLSNLTSLDLGGN--QL 153

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
            +LP SI  L +L EL + +N++T+LP+SI  L  L +L L  N L S P  + +
Sbjct: 154 TSLPESITKLSNLTELYLGHNQLTSLPESITKLSNLTELYLGHNQLTSLPESITK 208



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/162 (40%), Positives = 93/162 (57%), Gaps = 3/162 (1%)

Query: 35  KLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
           KLK L +SG  L  +P  +     LE L+   N+L  LP++IG +L NL +L +  NK+ 
Sbjct: 27  KLKWLYLSGCKLTEVPGDVWELEQLEVLDLGSNELTSLPESIG-KLSNLTSLYLVNNKLT 85

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSL 154
            LP+S+T L++L  L    N L SLPE +  L NL  L +S N   L +LP SIG L +L
Sbjct: 86  SLPESITKLSNLTELYLDGNQLTSLPESITKLSNLTELYLSVN--KLTSLPESIGKLSNL 143

Query: 155 VELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
             LD+  N++T+LP+SI  L  L +L L  N L S P  + +
Sbjct: 144 TSLDLGGNQLTSLPESITKLSNLTELYLGHNQLTSLPESITK 185


>gi|24216020|ref|NP_713501.1| hypothetical protein LA_3321 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075101|ref|YP_005989420.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
 gi|24197248|gb|AAN50519.1| putative lipoprotein [Leptospira interrogans serovar Lai str.
           56601]
 gi|353458892|gb|AER03437.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
          Length = 452

 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/187 (41%), Positives = 115/187 (61%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+H N+L  LP  IG L  L+ LD++ N L +LPK I   R+L+EL+ N N
Sbjct: 114 GQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLNSN 173

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  LP  IG +L NLKTL++   ++  LP+ +  L +L+ L+   N L +LP+++  L 
Sbjct: 174 KLTTLPKEIG-QLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQ 232

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NLE+L + +N   +  LP  IG L +L  LD+  N++TTLP  IG L+ LQ+L L  N L
Sbjct: 233 NLEILVLREN--RITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQL 290

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 291 TTLPKEI 297



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/182 (41%), Positives = 108/182 (59%), Gaps = 3/182 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+H NQL  LP  IG L  L+ LD+  N L +LPK I   ++L+EL  + N
Sbjct: 252 GQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDEN 311

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L ++ N++  LP+ +  L SL+VL    N L +LP+++  L 
Sbjct: 312 QLTTLPKEIE-QLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQ 370

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+VL +  N   L TLP  IG L +L EL +  N++TT P  I  L+ LQ+L L  NPL
Sbjct: 371 NLQVLGLISN--QLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPL 428

Query: 188 VS 189
            S
Sbjct: 429 SS 430



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/186 (39%), Positives = 111/186 (59%), Gaps = 3/186 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V  LD+   +L  LP  IG L  L+ LD+S N L +LPK I   R+L+EL+ +FN L 
Sbjct: 48  LKVRTLDLRYQKLTTLPKEIGQLQNLQRLDLSFNSLTTLPKEIGQLRNLQELDLSFNSLT 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  +G +L NL+ L ++ N++  LP  +  L +L+ LD   N L +LP+++  L NL+
Sbjct: 108 TLPKEVG-QLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L+++ N   L TLP  IG L +L  L++   ++TTLP  IG L+ L+ L+L  N L + 
Sbjct: 167 ELDLNSN--KLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTL 224

Query: 191 PMDVVE 196
           P ++ E
Sbjct: 225 PKEIGE 230



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 75/201 (37%), Positives = 119/201 (59%), Gaps = 4/201 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+ +L +  N++  LP  IG L  L+ LD+  N L +LPK I   ++L+ L+ + N
Sbjct: 229 GELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQN 288

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L ++ N++  LP+ +  L +LRVLD   N L +LP+++  L 
Sbjct: 289 QLTTLPKEIG-QLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQ 347

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+VL +  N   L TLP  IG L +L  L +  N++TTLP  IG L+ LQ+L L+ N L
Sbjct: 348 SLQVLALGSN--RLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQL 405

Query: 188 VSPPMDVVE-QGLSAVKGYLS 207
            + P ++ + + L  +  YL+
Sbjct: 406 TTFPKEIRQLKNLQELHLYLN 426



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 107/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  N L  LP  +G L  L+ LD+  N L +LP  I   ++L+EL+ N N
Sbjct: 91  GQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSN 150

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  LP  I  +L NL+ L +N NK+  LP+ +  L +L+ L+  +  L +LP+++  L 
Sbjct: 151 KLTTLPKEIR-QLRNLQELDLNSNKLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQ 209

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+  N   L TLP  IG L +L  L +  N+IT LP  IG L+ LQ L L  N L
Sbjct: 210 NLKTLNLLDN--QLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQL 267

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 268 TTLPKEI 274



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  N L  LP  IG L  L+ LD+S N L +LPK +    +L+ L+ + N
Sbjct: 68  GQLQNLQRLDLSFNSLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +N NK+  LP+ +  L +L+ LD   N L +LP+++  L 
Sbjct: 128 RLATLPMEIG-QLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLNSNKLTTLPKEIGQLQ 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+      L TLP  IG L +L  L++  N++TTLP  IG L+ L+ L L  N +
Sbjct: 187 NLKTLNLI--VTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRI 244

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 245 TALPKEI 251



 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 62/99 (62%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R LD R   L +LP+++  L NL+ L++S  F  L TLP  IG L +L 
Sbjct: 40  LAKTLQNPLKVRTLDLRYQKLTTLPKEIGQLQNLQRLDLS--FNSLTTLPKEIGQLRNLQ 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           ELD+S+N +TTLP  +G L  LQ+L L  N L + PM++
Sbjct: 98  ELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEI 136


>gi|418701720|ref|ZP_13262642.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759284|gb|EKR25499.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 356

 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N++ L +  NQL  LP  IG L  L+ L++  N   +LPK  E  +SL++L   +N
Sbjct: 114 GQLKNLLTLYLGYNQLTALPKEIGQLKNLQWLNLDANQFTTLPKEFEQLQSLQKLTLGYN 173

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           + + LP  IG +L NL+ L +N N+  ILP+    L +L VL+   N L +LP+++E L 
Sbjct: 174 QFKTLPKEIG-QLKNLQELYLNDNQFTILPKKFEQLKNLHVLNLGYNQLTTLPKEIEQLK 232

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L ++ N   L  LP  IG L  L  LD+ YN++TTLP  IG L+ LQ L L  N L
Sbjct: 233 NLHTLYLNNN--QLTALPKEIGQLHDLQWLDLGYNQLTTLPKEIGQLKNLQTLYLGNNQL 290

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 291 TALPKEI 297



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/170 (40%), Positives = 95/170 (55%), Gaps = 3/170 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  NQ K LP  IG L  L+ L ++ N    LPK  E  ++L  LN  +N+L  LP  
Sbjct: 168 LTLGYNQFKTLPKEIGQLKNLQELYLNDNQFTILPKKFEQLKNLHVLNLGYNQLTTLPKE 227

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           I  +L NL TL +N N++  LP+ +  L  L+ LD   N L +LP+++  L NL+ L + 
Sbjct: 228 IE-QLKNLHTLYLNNNQLTALPKEIGQLHDLQWLDLGYNQLTTLPKEIGQLKNLQTLYLG 286

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            N   L  LP  IG L +L EL++  N++TTLP  IG L+ LQ L L  N
Sbjct: 287 NN--QLTALPKEIGQLKNLQELNLWNNQLTTLPIEIGQLQNLQTLYLRNN 334



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 102/184 (55%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL +   +LK +PN I  L  L+ L ++ N L  LPK I     L+ L+ +FN+L 
Sbjct: 48  LDVQVLILREQKLKTVPNEIEQLKNLQWLHLNTNQLTILPKEIGQLHDLQWLDLDFNQLT 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG +L NL TL +  N++  LP+ +  L +L+ L+   N   +LP++ E L +L+
Sbjct: 108 TLPKEIG-QLKNLLTLYLGYNQLTALPKEIGQLKNLQWLNLDANQFTTLPKEFEQLQSLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +  N    +TLP  IG L +L EL ++ N+ T LP     L+ L  L+L  N L + 
Sbjct: 167 KLTLGYN--QFKTLPKEIGQLKNLQELYLNDNQFTILPKKFEQLKNLHVLNLGYNQLTTL 224

Query: 191 PMDV 194
           P ++
Sbjct: 225 PKEI 228



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 1/106 (0%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L +++NQL  LP  IG L  L+ LD+  N L +LPK I   ++L+ L    N+
Sbjct: 230 QLKNLHTLYLNNNQLTALPKEIGQLHDLQWLDLGYNQLTTLPKEIGQLKNLQTLYLGNNQ 289

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLN 114
           L  LP  IG +L NL+ L++  N++  LP  +  L +L+ L  R N
Sbjct: 290 LTALPKEIG-QLKNLQELNLWNNQLTTLPIEIGQLQNLQTLYLRNN 334



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 1/88 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++  LD+  NQL  LP  IG L  L+ L +  N L +LPK I   ++L+ELN   N
Sbjct: 252 GQLHDLQWLDLGYNQLTTLPKEIGQLKNLQTLYLGNNQLTALPKEIGQLKNLQELNLWNN 311

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVI 95
           +L  LP  IG +L NL+TL +  N+  I
Sbjct: 312 QLTTLPIEIG-QLQNLQTLYLRNNQFSI 338


>gi|359683929|ref|ZP_09253930.1| hypothetical protein Lsan2_04281 [Leptospira santarosai str.
           2000030832]
          Length = 504

 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/187 (41%), Positives = 117/187 (62%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L+++SNQ   LP  IG L KL+ L ++ + L +LPK I N ++L+ELN N N
Sbjct: 240 GNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSN 299

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP+ IG  L  L+ L +N +++  LP+ +  L  L+ L    N LK+LP+++  L 
Sbjct: 300 QFTTLPEEIG-NLQKLQKLDLNYSQLTTLPKEIGKLQKLQKLSLAQNQLKTLPKEIGKLQ 358

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++S N   L TLP  IG L +L ELD+  N++TTLP+ IG L+KLQ+L L GN L
Sbjct: 359 NLKNLSLSHN--ELTTLPKEIGNLQNLKELDLGGNQLTTLPEKIGNLQKLQELFLAGNRL 416

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 417 KTLPKEI 423



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 110/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L+++SNQ   LP  IG L KL+ LD+S N L +LPK I N + L+ L+   N
Sbjct: 125 GNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGNLQKLQTLDLAQN 184

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  I  +L  L+ L +  N++  LP+ +  L  L  L    N L +LP+++ NL 
Sbjct: 185 QLKTLPKEIE-KLQKLEALHLGNNELTTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQ 243

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN++ N     TLP  IG L  L +L ++++++TTLP  IG L+ LQ+L+L  N  
Sbjct: 244 NLQELNLNSN--QFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQF 301

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 302 TTLPEEI 308



 Score =  107 bits (266), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 114/208 (54%), Gaps = 24/208 (11%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L  +  L + +N+L  LP  I  L KL+ L +  N L +LPK I N ++L+ELN N N+
Sbjct: 195 KLQKLEALHLGNNELTTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQ 254

Query: 69  LRQLPDTIG----------------------FELINLKTLSINCNKIVILPQSLTHLTSL 106
              LP+ IG                        L NL+ L++N N+   LP+ + +L  L
Sbjct: 255 FTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKL 314

Query: 107 RVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITT 166
           + LD   + L +LP+++  L  L+ L+++QN   L+TLP  IG L +L  L +S+N++TT
Sbjct: 315 QKLDLNYSQLTTLPKEIGKLQKLQKLSLAQN--QLKTLPKEIGKLQNLKNLSLSHNELTT 372

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           LP  IG L+ L++L L GN L + P  +
Sbjct: 373 LPKEIGNLQNLKELDLGGNQLTTLPEKI 400



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 110/187 (58%), Gaps = 7/187 (3%)

Query: 12  NVVVLDVH----SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +V VLD+      N+L  LP  IG L  L+ L+++ N   +LP+ I N + L+ L+ + N
Sbjct: 102 DVRVLDLGPPEGGNKLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLSHN 161

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG  L  L+TL +  N++  LP+ +  L  L  L    N L +LP+++E L 
Sbjct: 162 RLTTLPKEIG-NLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIEKLQ 220

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   L TLP  IG L +L EL+++ N+ TTLP+ IG L+KLQKLSL  + L
Sbjct: 221 KLEALHLGNN--ELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRL 278

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 279 TTLPKEI 285



 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/187 (40%), Positives = 118/187 (63%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L+++SNQ   LP  IG L KL+ LD++ + L +LPK I   + L++L+   N
Sbjct: 286 GNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLDLNYSQLTTLPKEIGKLQKLQKLSLAQN 345

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG +L NLK LS++ N++  LP+ + +L +L+ LD   N L +LPE + NL 
Sbjct: 346 QLKTLPKEIG-KLQNLKNLSLSHNELTTLPKEIGNLQNLKELDLGGNQLTTLPEKIGNLQ 404

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L ++ N   L+TLP  IG L +L  L+++ N++TTLP  IG L+ L+ L+L GN L
Sbjct: 405 KLQELFLAGN--RLKTLPKEIGNLQNLQTLNLNNNQLTTLPKEIGNLQSLESLNLSGNSL 462

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 463 TSFPEEI 469



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 103/195 (52%), Gaps = 26/195 (13%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  +  L +  NQLK LP  IG L  LK L +S N L +LPK I N ++L+EL+   N
Sbjct: 332 GKLQKLQKLSLAQNQLKTLPKEIGKLQNLKNLSLSHNELTTLPKEIGNLQNLKELDLGGN 391

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG  L  L+ L +  N++  LP+ + +L +L+ L+   N L +LP+++ NL 
Sbjct: 392 QLTTLPEKIG-NLQKLQELFLAGNRLKTLPKEIGNLQNLQTLNLNNNQLTTLPKEIGNLQ 450

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +LE LN+                         S N +T+ P+ IG L+KL+ L L GNP 
Sbjct: 451 SLESLNL-------------------------SGNSLTSFPEEIGKLQKLKWLYLGGNPF 485

Query: 188 VSPPMDVVEQGLSAV 202
           +    + +++ L  V
Sbjct: 486 LRSQEEKIQKLLPNV 500



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 21/104 (20%)

Query: 91  NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL 150
           +K   L ++L H T +RVLD                     L   +    L TLP  IG 
Sbjct: 88  DKYYNLTEALQHPTDVRVLD---------------------LGPPEGGNKLTTLPKEIGN 126

Query: 151 LMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L +L EL+++ N+ TTLP+ IG L+KLQ L L  N L + P ++
Sbjct: 127 LQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLSHNRLTTLPKEI 170


>gi|456982914|gb|EMG19366.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 432

 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/184 (42%), Positives = 113/184 (61%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL +   +L  LP  I  L  LK+LD+  N L +LPK I   R+L+EL+ +FN L 
Sbjct: 48  LDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLT 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  +G +L NL+ L++N  K+  LP+ +  L +L+ LD   N L +LP+++  L NL+
Sbjct: 108 TLPKEVG-QLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++ QN   L TLP  IG L +L ELD++ NK+TTLP  I  LR LQ+L L  N L + 
Sbjct: 167 RLDLHQN--RLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTL 224

Query: 191 PMDV 194
           P ++
Sbjct: 225 PKEI 228



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 116/187 (62%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+H N+L  LP  IG L  L+ LD++ N L +LPK I   R+L+EL+ + N
Sbjct: 160 GQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRN 219

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NLKTL++   ++  LP+ +  L +L+ L+   N L +LP+++  L 
Sbjct: 220 QLTTLPKEIG-QLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQ 278

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NLE+L + +N   +  LP  IG L +L  LD+  N++TTLP  IG L+ LQ+L L+ N L
Sbjct: 279 NLEILVLREN--RITALPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQL 336

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 337 TTLPKEI 343



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 117/200 (58%), Gaps = 4/200 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  LD+H NQL  LP  IG L  LK L++    L +LPK I   ++L+ LN   N+
Sbjct: 207 QLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQ 266

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG EL NL+ L +  N+I  LP+ +  L +L+ LD   N L +LP+++  L N
Sbjct: 267 LTTLPKEIG-ELQNLEILVLRENRITALPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQN 325

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L + +N   L TLP  I  L +L  LD+  N++TTLP  IG L+ LQ+L L+ N L 
Sbjct: 326 LQELCLDEN--QLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLT 383

Query: 189 SPPMDVVE-QGLSAVKGYLS 207
           + P ++ + + L  +  YL+
Sbjct: 384 TFPKEIRQLKNLQELHLYLN 403



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 111/188 (59%), Gaps = 3/188 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ +LD+  NQL  LP  IG L  L+ LD+S N L +LPK +    +L+ LN N  K
Sbjct: 69  QLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQK 128

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG +L NL+ L ++ N +  LP+ +  L +L+ LD   N L +LP ++  L N
Sbjct: 129 LTTLPKEIG-QLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKN 187

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L+++ N   L TLP  I  L +L ELD+  N++TTLP  IG L+ L+ L+L    L 
Sbjct: 188 LQELDLNSN--KLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLT 245

Query: 189 SPPMDVVE 196
           + P ++ E
Sbjct: 246 TLPKEIGE 253



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/160 (38%), Positives = 92/160 (57%), Gaps = 3/160 (1%)

Query: 35  KLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
           K++  +V     + L K ++N   +  L  +  KL  LP  I  +L NLK L +  N++ 
Sbjct: 26  KIQAEEVEPEAYQDLTKALQNPLDVRVLILSEQKLTTLPKEIK-QLQNLKLLDLGHNQLT 84

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSL 154
            LP+ +  L +L+ LD   N L +LP+++  L NL+ LN+  N Q L TLP  IG L +L
Sbjct: 85  ALPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNL--NSQKLTTLPKEIGQLRNL 142

Query: 155 VELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            ELD+S+N +TTLP  +G L  LQ+L L  N L + PM++
Sbjct: 143 QELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEI 182



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 64/111 (57%), Gaps = 1/111 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+H NQL  LP  IG L  L+ L +  N L +LPK IE  ++L  L+ + N
Sbjct: 298 GQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNN 357

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKS 118
           +L  LP  IG +L NL+ L ++ N++   P+ +  L +L+ L   LN L S
Sbjct: 358 QLTTLPKEIG-QLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 407


>gi|73670787|ref|YP_306802.1| hypothetical protein Mbar_A3344 [Methanosarcina barkeri str.
           Fusaro]
 gi|72397949|gb|AAZ72222.1| hypothetical protein Mbar_A3344 [Methanosarcina barkeri str.
           Fusaro]
          Length = 892

 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/218 (38%), Positives = 125/218 (57%), Gaps = 4/218 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +   L N+  LD+  NQL  LP+ IG L  L +L++  N L  LP  I+  ++L 
Sbjct: 53  ILPQEI-GELKNLKTLDLSGNQLIQLPSEIGRLKNLTILNLYDNQLTQLPPEIKELKNLT 111

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L    NKL Q+P  IG +L NL+TL I CN++  LP  +  L +L +L    N L  LP
Sbjct: 112 ALTLFNNKLTQIPPEIG-KLKNLETLYIYCNQLTQLPPEIGELKNLSILALNKNKLTQLP 170

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++ NL NLE L++ +N Q +E LP  IG L +L  L +  NK+T LP  I  L+ L  L
Sbjct: 171 SEIGNLKNLETLSLYRN-QLIE-LPPEIGKLENLKTLYIDNNKLTILPPEISELKNLITL 228

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPK 218
           +L  NPL SPP ++V +GL A+  YL++    ++   K
Sbjct: 229 NLSANPLTSPPPEIVSRGLEAIFTYLNQSKTTENNEAK 266



 Score = 77.0 bits (188), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 59/166 (35%), Positives = 90/166 (54%), Gaps = 3/166 (1%)

Query: 29  SIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSI 88
           S+     L  L++SGN L  +P+ I   ++L  L+ + N L  LP  IG EL NLKTL +
Sbjct: 11  SVAKEKNLTNLNLSGNQLTQVPQEIGELKNLTMLDLSENTLTILPQEIG-ELKNLKTLDL 69

Query: 89  NCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSI 148
           + N+++ LP  +  L +L +L+   N L  LP +++ L NL  L +  N   L  +P  I
Sbjct: 70  SGNQLIQLPSEIGRLKNLTILNLYDNQLTQLPPEIKELKNLTALTLFNN--KLTQIPPEI 127

Query: 149 GLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           G L +L  L +  N++T LP  IG L+ L  L+L  N L   P ++
Sbjct: 128 GKLKNLETLYIYCNQLTQLPPEIGELKNLSILALNKNKLTQLPSEI 173



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 2/107 (1%)

Query: 90  CNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIG 149
            N+ V+   S+    +L  L+   N L  +P+++  L NL +L++S+N   L  LP  IG
Sbjct: 2   TNERVVQLISVAKEKNLTNLNLSGNQLTQVPQEIGELKNLTMLDLSENT--LTILPQEIG 59

Query: 150 LLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
            L +L  LD+S N++  LP  IG L+ L  L+L  N L   P ++ E
Sbjct: 60  ELKNLKTLDLSGNQLIQLPSEIGRLKNLTILNLYDNQLTQLPPEIKE 106


>gi|421084250|ref|ZP_15545113.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|410433150|gb|EKP77498.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 429

 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 78/184 (42%), Positives = 113/184 (61%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL +   +L  LP  I  L  LK+LD+  N L +LPK I   R+L+EL+ +FN L 
Sbjct: 48  LDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLT 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  +G +L NL+ L++N  K+  LP+ +  L +L+ LD   N L +LP+++  L NL+
Sbjct: 108 TLPKEVG-QLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++ QN   L TLP  IG L +L ELD++ NK+TTLP  I  LR LQ+L L  N L + 
Sbjct: 167 RLDLHQN--RLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTL 224

Query: 191 PMDV 194
           P ++
Sbjct: 225 PKEI 228



 Score =  118 bits (296), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 116/187 (62%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+H N+L  LP  IG L  L+ LD++ N L +LPK I   R+L+EL+ + N
Sbjct: 160 GQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRN 219

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NLKTL++   ++  LP+ +  L +L+ L+   N L +LP+++  L 
Sbjct: 220 QLTTLPKEIG-QLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQ 278

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NLE+L + +N   +  LP  IG L +L  LD+  N++TTLP  IG L+ LQ+L L+ N L
Sbjct: 279 NLEILVLREN--RITALPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQL 336

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 337 TTLPKEI 343



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 117/200 (58%), Gaps = 4/200 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  LD+H NQL  LP  IG L  LK L++    L +LPK I   ++L+ LN   N+
Sbjct: 207 QLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQ 266

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG EL NL+ L +  N+I  LP+ +  L +L+ LD   N L +LP+++  L N
Sbjct: 267 LTTLPKEIG-ELQNLEILVLRENRITALPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQN 325

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L + +N   L TLP  I  L +L  LD+  N++TTLP  IG L+ LQ+L L+ N L 
Sbjct: 326 LQELCLDEN--QLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLT 383

Query: 189 SPPMDVVE-QGLSAVKGYLS 207
           + P ++ + + L  +  YL+
Sbjct: 384 TFPKEIRQLKNLQELHLYLN 403



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 111/188 (59%), Gaps = 3/188 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ +LD+  NQL  LP  IG L  L+ LD+S N L +LPK +    +L+ LN N  K
Sbjct: 69  QLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQK 128

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG +L NL+ L ++ N +  LP+ +  L +L+ LD   N L +LP ++  L N
Sbjct: 129 LTTLPKEIG-QLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKN 187

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L+++ N   L TLP  I  L +L ELD+  N++TTLP  IG L+ L+ L+L    L 
Sbjct: 188 LQELDLNSN--KLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLT 245

Query: 189 SPPMDVVE 196
           + P ++ E
Sbjct: 246 TLPKEIGE 253



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/160 (38%), Positives = 92/160 (57%), Gaps = 3/160 (1%)

Query: 35  KLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
           K++  +V     + L K ++N   +  L  +  KL  LP  I  +L NLK L +  N++ 
Sbjct: 26  KIQAEEVEPEAYQDLTKALQNPLDVRVLILSEQKLTTLPKEIK-QLQNLKLLDLGHNQLT 84

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSL 154
            LP+ +  L +L+ LD   N L +LP+++  L NL+ LN+  N Q L TLP  IG L +L
Sbjct: 85  ALPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNL--NSQKLTTLPKEIGQLRNL 142

Query: 155 VELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            ELD+S+N +TTLP  +G L  LQ+L L  N L + PM++
Sbjct: 143 QELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEI 182



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 64/111 (57%), Gaps = 1/111 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+H NQL  LP  IG L  L+ L +  N L +LPK IE  ++L  L+ + N
Sbjct: 298 GQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNN 357

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKS 118
           +L  LP  IG +L NL+ L ++ N++   P+ +  L +L+ L   LN L S
Sbjct: 358 QLTTLPKEIG-QLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 407


>gi|417765301|ref|ZP_12413265.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352483|gb|EJP04668.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 288

 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/186 (41%), Positives = 119/186 (63%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ +LD+  NQ K +P  IG L  L+VL++S N L +LPK I    +L+ LN + N+
Sbjct: 94  QLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQ 153

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG +L NL+ L+++ N+++  P+ +  L +L+VL+   N LK+LP+ +E L N
Sbjct: 154 LTTLPKEIG-KLENLQVLNLSSNQLITFPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKN 212

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +  N+  L TLP  IG L SL EL + +N+I TLPD I  L+ L+KL+L  NP+ 
Sbjct: 213 LQTLYL--NYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQNLRKLTLYENPI- 269

Query: 189 SPPMDV 194
            PP ++
Sbjct: 270 -PPQEL 274



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 111/184 (60%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V +L +   +L  LP  I  L  L++LD+  N  +++PK IE  ++L+ L+  +N+ +
Sbjct: 50  LDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYNQFK 109

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            +P  IG +L NL+ L+++ N++  LP+ +  L +L+VL+   N L +LP+++  L NL+
Sbjct: 110 TVPKKIG-QLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQLTTLPKEIGKLENLQ 168

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
           VLN+S N   L T P  IG L +L  L++  N++ TLP  I  L+ LQ L L  N L + 
Sbjct: 169 VLNLSSN--QLITFPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTL 226

Query: 191 PMDV 194
           P ++
Sbjct: 227 PREI 230



 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 1/102 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL++ SNQL   P  IG L  L+VL++  N L++LPK IE  ++L+ L  N+N
Sbjct: 162 GKLENLQVLNLSSNQLITFPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYN 221

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           +L  LP  IG  L +L  L +  N+I  LP  +  L +LR L
Sbjct: 222 QLTTLPREIG-RLQSLTELHLQHNQIATLPDEIIQLQNLRKL 262



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R+L      L +LP+ +E L NL++L++  N    +T+P  I  L +L 
Sbjct: 42  LTEALQNSLDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYN--QFKTVPKEIEQLKNLQ 99

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LD+ YN+  T+P  IG L+ LQ L+L  N L + P ++
Sbjct: 100 MLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEI 138



 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L E L+N +++ +L +S+  Q L TLP  I  L +L  LD+ YN+  T+P  I  L+ 
Sbjct: 40  RDLTEALQNSLDVRILILSE--QKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKN 97

Query: 177 LQKLSLEGNPLVSPPMDV 194
           LQ L L  N   + P  +
Sbjct: 98  LQMLDLCYNQFKTVPKKI 115


>gi|421129189|ref|ZP_15589392.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410359579|gb|EKP06671.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 400

 Score =  120 bits (301), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 77/184 (41%), Positives = 115/184 (62%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VLD+   +LK LP  IG L  L+VL+++ N L +LPK I   ++L+EL+ + N+L 
Sbjct: 46  LDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLT 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
             P  IG +L NL+TL ++ N++  LP+ +  L +LR L    N LK+LP+++  L NL+
Sbjct: 106 TFPKEIG-QLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQLKTLPKEIGQLKNLQ 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+  N   L+TLP  IG L +L EL +SYN++ TL   IG L+ LQ L L  N L + 
Sbjct: 165 QLNLYAN--QLKTLPKEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTL 222

Query: 191 PMDV 194
           P ++
Sbjct: 223 PKEI 226



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 113/187 (60%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL++++NQL  LP  IG L  L+ L +SGN L + PK I   ++L+ L  + N
Sbjct: 66  GQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKEIGQLKNLQTLVLSKN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +N N++  LP+ +  L +L+ L+   N LK+LP+++  L 
Sbjct: 126 RLTTLPKEIG-QLKNLRELYLNTNQLKTLPKEIGQLKNLQQLNLYANQLKTLPKEIGQLQ 184

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L++S N   L+TL   IG L +L  LD++ N++ TLP  IG L+ LQ L L  N  
Sbjct: 185 NLRELHLSYN--QLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQF 242

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 243 KTVPEEI 249



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 114/187 (60%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  NQLK L   IG L  L+VLD++ N L++LPK I   ++L+ L+ N N
Sbjct: 181 GQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNN 240

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           + + +P+ IG +L NL+ L +  N+   +P+ +  L +L++L    N  K++PE+   L 
Sbjct: 241 QFKTVPEEIG-QLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEETGQLK 299

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L+++ N   L TLP  I  L +L EL +SYN++ TL   IG L+ L+KLSL  N L
Sbjct: 300 NLQMLSLNAN--QLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQL 357

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 358 TTLPKEI 364



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 41/99 (41%), Positives = 60/99 (60%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVLD     LK+LP+++  L NL+VL ++ N   L TLP  IG L +L 
Sbjct: 38  LTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNN--QLATLPKEIGQLQNLQ 95

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           EL +S N++TT P  IG L+ LQ L L  N L + P ++
Sbjct: 96  ELHLSGNQLTTFPKEIGQLKNLQTLVLSKNRLTTLPKEI 134



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 1/75 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE  T +L N+ +L +++NQL  LPN I  L  L+ L +S N L++L   I   ++L++
Sbjct: 291 VPEE-TGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKK 349

Query: 62  LNANFNKLRQLPDTI 76
           L+   N+L  LP  I
Sbjct: 350 LSLRDNQLTTLPKEI 364


>gi|456889972|gb|EMG00842.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 290

 Score =  120 bits (301), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 79/187 (42%), Positives = 111/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L++  N+L+ LP  IG L  LKVLD   N L +LPK I   ++L+ L   +N
Sbjct: 75  GELQNLEHLNLWKNKLRTLPKEIGNLQNLKVLDSGLNELTTLPKEIGELQNLDHLELRYN 134

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           K + LP  IG  L NL  L +  NK   LP+ + +L  L+VL+   N LK+LP+++  L 
Sbjct: 135 KFKTLPKEIG-NLQNLGLLDLEKNKFKTLPKEIWNLQKLQVLNLSHNKLKTLPKEIGELQ 193

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  LN+S N   L TLP  IG L +L EL +S N++ TLP  IG L+ LQ+L L GN L
Sbjct: 194 NLRYLNLSDN--QLMTLPKEIGNLQNLQELHLSGNQLMTLPKEIGNLQNLQELHLSGNQL 251

Query: 188 VSPPMDV 194
           ++ P ++
Sbjct: 252 MTLPKEI 258



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/184 (41%), Positives = 115/184 (62%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           ++   L ++ N+LK LP  IG L  L+ L++  N L +LPK I N ++L+ L++  N+L 
Sbjct: 55  MDARALYLNGNELKTLPKEIGELQNLEHLNLWKNKLRTLPKEIGNLQNLKVLDSGLNELT 114

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG EL NL  L +  NK   LP+ + +L +L +LD   N  K+LP+++ NL  L+
Sbjct: 115 TLPKEIG-ELQNLDHLELRYNKFKTLPKEIGNLQNLGLLDLEKNKFKTLPKEIWNLQKLQ 173

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
           VLN+S N   L+TLP  IG L +L  L++S N++ TLP  IG L+ LQ+L L GN L++ 
Sbjct: 174 VLNLSHN--KLKTLPKEIGELQNLRYLNLSDNQLMTLPKEIGNLQNLQELHLSGNQLMTL 231

Query: 191 PMDV 194
           P ++
Sbjct: 232 PKEI 235



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 106/173 (61%), Gaps = 4/173 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L++  N+ K LP  IG L  L +LD+  N  ++LPK I N + L+ LN + N
Sbjct: 121 GELQNLDHLELRYNKFKTLPKEIGNLQNLGLLDLEKNKFKTLPKEIWNLQKLQVLNLSHN 180

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL+ LP  IG EL NL+ L+++ N+++ LP+ + +L +L+ L    N L +LP+++ NL 
Sbjct: 181 KLKTLPKEIG-ELQNLRYLNLSDNQLMTLPKEIGNLQNLQELHLSGNQLMTLPKEIGNLQ 239

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           NL+ L++S N   L TLP  IG L +L EL +S N++  +P  I   +KL+ L
Sbjct: 240 NLQELHLSGN--QLMTLPKEIGNLQNLQELHLSGNQL-MIPKEIWNSKKLRVL 289



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 89/149 (59%), Gaps = 3/149 (2%)

Query: 48  SLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
           +L K ++N      L  N N+L+ LP  IG EL NL+ L++  NK+  LP+ + +L +L+
Sbjct: 46  NLAKALQNPMDARALYLNGNELKTLPKEIG-ELQNLEHLNLWKNKLRTLPKEIGNLQNLK 104

Query: 108 VLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
           VLD+ LN L +LP+++  L NL+ L +   +   +TLP  IG L +L  LD+  NK  TL
Sbjct: 105 VLDSGLNELTTLPKEIGELQNLDHLELR--YNKFKTLPKEIGNLQNLGLLDLEKNKFKTL 162

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           P  I  L+KLQ L+L  N L + P ++ E
Sbjct: 163 PKEIWNLQKLQVLNLSHNKLKTLPKEIGE 191


>gi|421092601|ref|ZP_15553333.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410364452|gb|EKP15473.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
          Length = 300

 Score =  120 bits (301), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 79/187 (42%), Positives = 111/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L++  N+L+ LP  IG L  LKVLD   N L +LPK I   ++L+ L   +N
Sbjct: 85  GELQNLEHLNLWKNKLRTLPKEIGNLQNLKVLDSGLNELTTLPKEIGELQNLDHLELRYN 144

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           K + LP  IG  L NL  L +  NK   LP+ + +L  L+VL+   N LK+LP+++  L 
Sbjct: 145 KFKTLPKEIG-NLQNLGLLDLEKNKFKTLPKEIWNLQKLQVLNLSHNKLKTLPKEIGELQ 203

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  LN+S N   L TLP  IG L +L EL +S N++ TLP  IG L+ LQ+L L GN L
Sbjct: 204 NLRYLNLSDN--QLMTLPKEIGNLQNLQELHLSGNQLMTLPKEIGNLQNLQELHLSGNQL 261

Query: 188 VSPPMDV 194
           ++ P ++
Sbjct: 262 MTLPKEI 268



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/184 (41%), Positives = 115/184 (62%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           ++   L ++ N+LK LP  IG L  L+ L++  N L +LPK I N ++L+ L++  N+L 
Sbjct: 65  MDARALYLNGNELKTLPKEIGELQNLEHLNLWKNKLRTLPKEIGNLQNLKVLDSGLNELT 124

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG EL NL  L +  NK   LP+ + +L +L +LD   N  K+LP+++ NL  L+
Sbjct: 125 TLPKEIG-ELQNLDHLELRYNKFKTLPKEIGNLQNLGLLDLEKNKFKTLPKEIWNLQKLQ 183

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
           VLN+S N   L+TLP  IG L +L  L++S N++ TLP  IG L+ LQ+L L GN L++ 
Sbjct: 184 VLNLSHN--KLKTLPKEIGELQNLRYLNLSDNQLMTLPKEIGNLQNLQELHLSGNQLMTL 241

Query: 191 PMDV 194
           P ++
Sbjct: 242 PKEI 245



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 106/173 (61%), Gaps = 4/173 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L++  N+ K LP  IG L  L +LD+  N  ++LPK I N + L+ LN + N
Sbjct: 131 GELQNLDHLELRYNKFKTLPKEIGNLQNLGLLDLEKNKFKTLPKEIWNLQKLQVLNLSHN 190

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL+ LP  IG EL NL+ L+++ N+++ LP+ + +L +L+ L    N L +LP+++ NL 
Sbjct: 191 KLKTLPKEIG-ELQNLRYLNLSDNQLMTLPKEIGNLQNLQELHLSGNQLMTLPKEIGNLQ 249

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           NL+ L++S N   L TLP  IG L +L EL +S N++  +P  I   +KL+ L
Sbjct: 250 NLQELHLSGN--QLMTLPKEIGNLQNLQELHLSGNQL-MIPKEIWNSKKLRVL 299



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 89/149 (59%), Gaps = 3/149 (2%)

Query: 48  SLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
           +L K ++N      L  N N+L+ LP  IG EL NL+ L++  NK+  LP+ + +L +L+
Sbjct: 56  NLAKALQNPMDARALYLNGNELKTLPKEIG-ELQNLEHLNLWKNKLRTLPKEIGNLQNLK 114

Query: 108 VLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
           VLD+ LN L +LP+++  L NL+ L +   +   +TLP  IG L +L  LD+  NK  TL
Sbjct: 115 VLDSGLNELTTLPKEIGELQNLDHLELR--YNKFKTLPKEIGNLQNLGLLDLEKNKFKTL 172

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           P  I  L+KLQ L+L  N L + P ++ E
Sbjct: 173 PKEIWNLQKLQVLNLSHNKLKTLPKEIGE 201


>gi|421099974|ref|ZP_15560616.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796955|gb|EKR99072.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 398

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/172 (43%), Positives = 113/172 (65%), Gaps = 3/172 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           VL ++ NQL  LP  IG L  L+VL+++ N L++LPK I   ++L+ LN + NKL  LP+
Sbjct: 205 VLHLYDNQLTTLPKEIGKLQNLQVLELTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPN 264

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            IG +L NL+ L +  N++  LP+ + +L  L++L+   N LK+LP+++  L NL+VLN+
Sbjct: 265 DIG-KLQNLQELYLTNNQLTTLPKDIGYLKELQILELTNNQLKTLPKEIGQLQNLQVLNL 323

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           S N   L TLP  IG L +L EL ++ N++TTLP  IG L++LQ L L+  P
Sbjct: 324 SHN--KLTTLPKDIGKLQNLQELYLTNNQLTTLPKDIGYLKELQILHLDDIP 373



 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 78/194 (40%), Positives = 115/194 (59%), Gaps = 12/194 (6%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           VL ++ NQL  LP  IG L +L+VL +  N L +LPK I   ++L+ L    N+L+ LP 
Sbjct: 182 VLHLYDNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGKLQNLQVLELTNNQLKTLPK 241

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            IG +L NL+ L+++ NK+  LP  +  L +L+ L    N L +LP+D+  L  L++L +
Sbjct: 242 EIG-QLQNLQVLNLSHNKLTTLPNDIGKLQNLQELYLTNNQLTTLPKDIGYLKELQILEL 300

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           + N   L+TLP  IG L +L  L++S+NK+TTLP  IG L+ LQ+L L  N L + P D+
Sbjct: 301 TNN--QLKTLPKEIGQLQNLQVLNLSHNKLTTLPKDIGKLQNLQELYLTNNQLTTLPKDI 358

Query: 195 VEQGLSAVKGYLSE 208
                    GYL E
Sbjct: 359 ---------GYLKE 363



 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 74/183 (40%), Positives = 109/183 (59%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V +LD+ SNQL  LP  IG L  L+VLD++ N L +LPK IE+ + L+ L+ + NKL  
Sbjct: 41  DVRILDLKSNQLTTLPKDIGQLQNLQVLDLTNNQLTALPKEIEHLKELQVLHLSHNKLTS 100

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  I   L  L+ L ++ N++  LP+ + HL  L+ L    N L +LP+++  L  L+V
Sbjct: 101 LPKDIEH-LKELQELHLDYNQLTTLPKDIEHLKELQELHLDYNQLTTLPKEIGYLKELQV 159

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L++  N   L TLP  IG L  L  L +  N++TTLP  IG L++LQ L L  N L + P
Sbjct: 160 LHLYDN--QLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGYLKELQVLHLYDNQLTTLP 217

Query: 192 MDV 194
            ++
Sbjct: 218 KEI 220



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 125/245 (51%), Gaps = 54/245 (22%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VLD+ +NQL  LP  I  L +L+VL +S N L SLPK IE+ + L+EL+ ++N
Sbjct: 60  GQLQNLQVLDLTNNQLTALPKEIEHLKELQVLHLSHNKLTSLPKDIEHLKELQELHLDYN 119

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I   L  L+ L ++ N++  LP+ + +L  L+VL    N L +LP+++  L 
Sbjct: 120 QLTTLPKDIEH-LKELQELHLDYNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGYLK 178

Query: 128 NLEVLNIS-------------------------------------QNFQYLE-------T 143
            L+VL++                                      QN Q LE       T
Sbjct: 179 ELQVLHLYDNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGKLQNLQVLELTNNQLKT 238

Query: 144 LPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVK 203
           LP  IG L +L  L++S+NK+TTLP+ IG L+ LQ+L L  N L + P D+         
Sbjct: 239 LPKEIGQLQNLQVLNLSHNKLTTLPNDIGKLQNLQELYLTNNQLTTLPKDI--------- 289

Query: 204 GYLSE 208
           GYL E
Sbjct: 290 GYLKE 294


>gi|418741977|ref|ZP_13298350.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|410750335|gb|EKR07315.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 379

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/208 (38%), Positives = 122/208 (58%), Gaps = 22/208 (10%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L ++ NQL  LPN IG L  L+VLD+  N L  LPK I   ++L+ LN  FN
Sbjct: 68  GKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LPD +G +L NL+ L+++ NK+ ILP+ +  L +L++L+++ N L + P+++  L 
Sbjct: 128 RLTILPDEVG-QLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQ 186

Query: 128 NLEVLNIS--------------QNFQYLE-------TLPYSIGLLMSLVELDVSYNKITT 166
            L+ LN+               QN Q L+       TLP  IG L  L +L +  N++TT
Sbjct: 187 KLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLSKLQKLYLYGNQLTT 246

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           LP+ IG L+KLQ+L L  NPL + P ++
Sbjct: 247 LPEEIGQLKKLQELYLGNNPLRTLPKEI 274



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 114/218 (52%), Gaps = 27/218 (12%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLK----------------------- 37
           ++PE +  +L N+ +L+   NQL   P  IG L KL+                       
Sbjct: 154 ILPEKI-GQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQ 212

Query: 38  VLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILP 97
           +LD+  N L +LPK I     L++L    N+L  LP+ IG +L  L+ L +  N +  LP
Sbjct: 213 ILDLISNPLTTLPKEIGQLSKLQKLYLYGNQLTTLPEEIG-QLKKLQELYLGNNPLRTLP 271

Query: 98  QSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVEL 157
           + +  L  L+ L    N + + P+++  L NL+ LN+   F  L TLP  IG L +L EL
Sbjct: 272 KEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLG--FNQLTTLPQEIGQLQNLQEL 329

Query: 158 DVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
           ++ +N++ TLP  +G L+KL+KL+L  NP+ S  ++ +
Sbjct: 330 NLEFNQLATLPKEVGQLQKLRKLNLYNNPIASEKIERI 367



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/180 (38%), Positives = 107/180 (59%), Gaps = 3/180 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +L++  ++L  L   IG L  L+ L ++ N L +LP  I   ++L+ L+   N+L  LP 
Sbjct: 52  ILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPK 111

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            IG +L NL+ L++  N++ ILP  +  L +L+VL+  LN L  LPE +  L NL++LN 
Sbjct: 112 EIG-KLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILN- 169

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           SQ  Q L T P  IG L  L EL++ +N++TTL + +  L+ LQ L L  NPL + P ++
Sbjct: 170 SQGNQ-LTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEI 228



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 70/194 (36%), Positives = 113/194 (58%), Gaps = 3/194 (1%)

Query: 37  KVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVIL 96
           ++L++SG+ L +L K I   ++L++L  N+N+L  LP+ IG +L NL+ L +  N++ IL
Sbjct: 51  RILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIG-QLQNLQVLDLYSNELTIL 109

Query: 97  PQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVE 156
           P+ +  L +L+VL+   N L  LP+++  L NL+VLN+  N   L  LP  IG L +L  
Sbjct: 110 PKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLN--KLTILPEKIGQLQNLQI 167

Query: 157 LDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKS 216
           L+   N++TT P  IG L+KLQ+L+L  N L +   +VV+     +   +S  +    K 
Sbjct: 168 LNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKE 227

Query: 217 PKKKSWVGKLVKYG 230
             + S + KL  YG
Sbjct: 228 IGQLSKLQKLYLYG 241



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 3/115 (2%)

Query: 81  INLKTLSINCNK-IVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           +N ++++I  NK + IL   +     L+         ++L E L+N  +  +LN+S +  
Sbjct: 1   MNFQSINIRLNKRLTILLILICFSCKLQAQSKETQTYRNLTEALQNPKDARILNLSGS-- 58

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L TL   IG L +L +L ++YN++TTLP+ IG L+ LQ L L  N L   P ++
Sbjct: 59  KLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEI 113


>gi|392966514|ref|ZP_10331933.1| putative serine/threonine-protein kinase pats1 [Fibrisoma limi BUZ
           3]
 gi|387845578|emb|CCH53979.1| putative serine/threonine-protein kinase pats1 [Fibrisoma limi BUZ
           3]
          Length = 925

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/191 (40%), Positives = 112/191 (58%), Gaps = 4/191 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++PES+  +L  +  L +H NQL  LP SI  L++L  L +  N L  LP++I     L 
Sbjct: 55  ILPESI-GQLTQLTRLSLHDNQLAVLPESISQLTQLTSLSLHDNQLAVLPESISQLTQLT 113

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ + N+L  LP++IG +L  L  L ++ N++ +LP+S+  LT L  LD   N L  LP
Sbjct: 114 ELDLSTNQLTVLPESIG-QLNQLTRLDLHTNQLTVLPESIGQLTQLTRLDLSNNQLTDLP 172

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E +  L  L  L++  N   L  LP SIG L  L ELD+  N++TTLP+SIG L +L++L
Sbjct: 173 ESIGQLTQLTELDLPNN--QLTDLPESIGQLTQLTELDLRNNELTTLPESIGQLTQLREL 230

Query: 181 SLEGNPLVSPP 191
           SL  N L   P
Sbjct: 231 SLHTNELTVLP 241



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 74/190 (38%), Positives = 108/190 (56%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+  +L  +  L ++ NQL  LP SIG L++L  L +  N L  LP++I     L  
Sbjct: 33  LPESI-GQLTQLTRLYLYDNQLTILPESIGQLTQLTRLSLHDNQLAVLPESISQLTQLTS 91

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L  LP++I  +L  L  L ++ N++ +LP+S+  L  L  LD   N L  LPE
Sbjct: 92  LSLHDNQLAVLPESIS-QLTQLTELDLSTNQLTVLPESIGQLNQLTRLDLHTNQLTVLPE 150

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L  L  L++S N   L  LP SIG L  L ELD+  N++T LP+SIG L +L +L 
Sbjct: 151 SIGQLTQLTRLDLSNN--QLTDLPESIGQLTQLTELDLPNNQLTDLPESIGQLTQLTELD 208

Query: 182 LEGNPLVSPP 191
           L  N L + P
Sbjct: 209 LRNNELTTLP 218



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/196 (39%), Positives = 112/196 (57%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++PES+ ++L  +  L +H NQL  LP SI  L++L  LD+S N L  LP++I     L 
Sbjct: 78  VLPESI-SQLTQLTSLSLHDNQLAVLPESISQLTQLTELDLSTNQLTVLPESIGQLNQLT 136

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+ + N+L  LP++IG +L  L  L ++ N++  LP+S+  LT L  LD   N L  LP
Sbjct: 137 RLDLHTNQLTVLPESIG-QLTQLTRLDLSNNQLTDLPESIGQLTQLTELDLPNNQLTDLP 195

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E +  L  L  L++  N   L TLP SIG L  L EL +  N++T LP S+  L  L+ L
Sbjct: 196 ESIGQLTQLTELDLRNN--ELTTLPESIGQLTQLRELSLHTNELTVLPKSLQHLTLLRLL 253

Query: 181 SLEGNPLVSPPMDVVE 196
            L GN  +  P +V+E
Sbjct: 254 DLRGNTDLGIPPEVIE 269



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 101/177 (57%), Gaps = 3/177 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +LD+    L  LP SIG L++L  L +  N L  LP++I     L  L+ + N+L  LP+
Sbjct: 22  ILDLSGLNLSSLPESIGQLTQLTRLYLYDNQLTILPESIGQLTQLTRLSLHDNQLAVLPE 81

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
           +I  +L  L +LS++ N++ +LP+S++ LT L  LD   N L  LPE +  L  L  L++
Sbjct: 82  SIS-QLTQLTSLSLHDNQLAVLPESISQLTQLTELDLSTNQLTVLPESIGQLNQLTRLDL 140

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
             N   L  LP SIG L  L  LD+S N++T LP+SIG L +L +L L  N L   P
Sbjct: 141 HTN--QLTVLPESIGQLTQLTRLDLSNNQLTDLPESIGQLTQLTELDLPNNQLTDLP 195



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 67/169 (39%), Positives = 96/169 (56%), Gaps = 5/169 (2%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELIN 82
           L+ + N+   LS+  +LD+SG  L SLP++I     L  L    N+L  LP++IG +L  
Sbjct: 9   LRRIKNTRSKLSE--ILDLSGLNLSSLPESIGQLTQLTRLYLYDNQLTILPESIG-QLTQ 65

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           L  LS++ N++ +LP+S++ LT L  L    N L  LPE +  L  L  L++S N   L 
Sbjct: 66  LTRLSLHDNQLAVLPESISQLTQLTSLSLHDNQLAVLPESISQLTQLTELDLSTN--QLT 123

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            LP SIG L  L  LD+  N++T LP+SIG L +L +L L  N L   P
Sbjct: 124 VLPESIGQLNQLTRLDLHTNQLTVLPESIGQLTQLTRLDLSNNQLTDLP 172


>gi|418726308|ref|ZP_13284919.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960218|gb|EKO23972.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 312

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/186 (40%), Positives = 120/186 (64%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ +LD+  NQ K +P  I  L  L++LD+  N  +++PK IE  ++L+ LN + N+
Sbjct: 118 QLKNLQMLDLCYNQFKTVPKKIEQLKNLQMLDLCYNQFKTVPKKIEQLKNLQVLNLSSNQ 177

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG +L NL+ L+++ N+++ LP+ +  L +L+VL+   N LK+LP+ +E L N
Sbjct: 178 LTTLPKEIG-KLENLQVLNLSSNQLITLPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKN 236

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +  N+  L TLP  IG L SL EL + +N+I TLPD I  L+ L+KL+L  NP+ 
Sbjct: 237 LQTLYL--NYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQNLRKLTLYENPI- 293

Query: 189 SPPMDV 194
            PP ++
Sbjct: 294 -PPQEL 298



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 108/184 (58%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V +L +   +L  LP  I  L  L++LD+  N  +++PK IE  ++L+ L+  +N+ +
Sbjct: 74  LDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYNQFK 133

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            +P  I  +L NL+ L +  N+   +P+ +  L +L+VL+   N L +LP+++  L NL+
Sbjct: 134 TVPKKIE-QLKNLQMLDLCYNQFKTVPKKIEQLKNLQVLNLSSNQLTTLPKEIGKLENLQ 192

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
           VLN+S N   L TLP  IG L +L  L++  N++ TLP  I  L+ LQ L L  N L + 
Sbjct: 193 VLNLSSN--QLITLPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTL 250

Query: 191 PMDV 194
           P ++
Sbjct: 251 PREI 254



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 62/102 (60%), Gaps = 1/102 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL++ SNQL  LP  IG L  L+VL++  N L++LPK IE  ++L+ L  N+N
Sbjct: 186 GKLENLQVLNLSSNQLITLPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYN 245

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           +L  LP  IG  L +L  L +  N+I  LP  +  L +LR L
Sbjct: 246 QLTTLPREIG-RLQSLTELHLQHNQIATLPDEIIQLQNLRKL 286



 Score = 44.3 bits (103), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R+L      L +LP+ +E L NL++L++  N    +T+P  I  L +L 
Sbjct: 66  LTEALQNSLDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYN--QFKTVPKEIEQLKNLQ 123

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LD+ YN+  T+P  I  L+ LQ L L  N   + P  +
Sbjct: 124 MLDLCYNQFKTVPKKIEQLKNLQMLDLCYNQFKTVPKKI 162



 Score = 40.0 bits (92), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L E L+N +++ +L +S+  Q L TLP  I  L +L  LD+ YN+  T+P  I  L+ 
Sbjct: 64  RDLTEALQNSLDVRILILSE--QKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKN 121

Query: 177 LQKLSLEGNPLVSPPMDV 194
           LQ L L  N   + P  +
Sbjct: 122 LQMLDLCYNQFKTVPKKI 139


>gi|421110782|ref|ZP_15571273.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803879|gb|EKS10006.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 473

 Score =  118 bits (296), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 114/193 (59%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +   L N+  LD+  NQL  LP  IG L  L+ LD+ GN L +LP+ I N ++L+ 
Sbjct: 249 LPEEI-GNLQNLQTLDLEGNQLAALPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQT 307

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+L  LP  IG      K    N N++  LP+ +  L  L+ L    N LK+LP+
Sbjct: 308 LDLEGNQLTTLPKEIGKLQKLKKLYLYN-NRLTTLPKEIGKLQKLQWLSLDHNQLKTLPK 366

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++E+L NL++L++  N   L TLP  +G L +L+ LD+  N++TTLP  IG L+ L+ L 
Sbjct: 367 EIEDLQNLKILSLGSN--QLTTLPKEVGKLQNLIMLDLHGNQLTTLPKEIGKLQNLKMLD 424

Query: 182 LEGNPLVSPPMDV 194
           L GN L++ P ++
Sbjct: 425 LHGNQLMTLPKEI 437



 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 114/187 (60%), Gaps = 7/187 (3%)

Query: 12  NVVVLDVH----SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +V VLD+      NQL  LP  IG L  L+ L+++ N   +LP+ I N + L++L+ + N
Sbjct: 139 DVRVLDLGPPEGGNQLTTLPKEIGNLQNLQTLNLNSNQFTTLPEEIGNLQKLQKLDLSHN 198

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L++N N++  L + + +L +L+ LD   N L +LPE++ NL 
Sbjct: 199 QLTTLPKEIG-QLQNLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIGNLQ 257

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++  N   L  LP  IG L +L  LD+  N++ TLP+ IG L+ LQ L LEGN L
Sbjct: 258 NLQTLDLEGN--QLAALPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQL 315

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 316 TTLPKEI 322



 Score =  114 bits (286), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 81/210 (38%), Positives = 117/210 (55%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L+++SNQ   LP  IG L KL+ LD+S N L +LPK I   ++L++LN N N
Sbjct: 162 GNLQNLQTLNLNSNQFTTLPEEIGNLQKLQKLDLSHNQLTTLPKEIGQLQNLQKLNLNSN 221

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  L   IG  L NL+TL +  N++  LP+ + +L +L+ LD   N L +LPE++ NL 
Sbjct: 222 QLTTLSKEIG-NLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLAALPEEIGNLQ 280

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGC-------------- 173
           NL+ L++  N   L TLP  IG L +L  LD+  N++TTLP  IG               
Sbjct: 281 NLQTLDLEGN--QLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQKLKKLYLYNNRL 338

Query: 174 ---------LRKLQKLSLEGNPLVSPPMDV 194
                    L+KLQ LSL+ N L + P ++
Sbjct: 339 TTLPKEIGKLQKLQWLSLDHNQLKTLPKEI 368



 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 39/56 (69%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELN 63
            +L N+++LD+H NQL  LP  IG L  LK+LD+ GN L +LPK I   ++L+ELN
Sbjct: 392 GKLQNLIMLDLHGNQLTTLPKEIGKLQNLKMLDLHGNQLMTLPKEIGKLQNLKELN 447



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 1/82 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+ +L + SNQL  LP  +G L  L +LD+ GN L +LPK I   ++L+ L+ + N+L
Sbjct: 371 LQNLKILSLGSNQLTTLPKEVGKLQNLIMLDLHGNQLTTLPKEIGKLQNLKMLDLHGNQL 430

Query: 70  RQLPDTIGFELINLKTLSINCN 91
             LP  IG +L NLK L++  N
Sbjct: 431 MTLPKEIG-KLQNLKELNLVGN 451



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 2/79 (2%)

Query: 118 SLPEDLENLINLEVLNIS--QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLR 175
           +L E L++  ++ VL++   +    L TLP  IG L +L  L+++ N+ TTLP+ IG L+
Sbjct: 129 NLTEALQHPTDVRVLDLGPPEGGNQLTTLPKEIGNLQNLQTLNLNSNQFTTLPEEIGNLQ 188

Query: 176 KLQKLSLEGNPLVSPPMDV 194
           KLQKL L  N L + P ++
Sbjct: 189 KLQKLDLSHNQLTTLPKEI 207


>gi|455791564|gb|EMF43371.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 452

 Score =  118 bits (296), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 115/187 (61%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+H N+L  LP  IG L  L+ LD++ N L +LPK I   R+L+EL+ + N
Sbjct: 91  GQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRN 150

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NLKTL++   ++  LP+ +  L +L+ L+   N L +LP+++  L 
Sbjct: 151 QLTTLPKEIG-QLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQ 209

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NLE+L + +N   +  LP  IG L +L  LD+  N++TTLP  IG L+ LQ+L L  N L
Sbjct: 210 NLEILVLREN--RITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQL 267

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 268 TTLPKEI 274



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/201 (39%), Positives = 121/201 (60%), Gaps = 4/201 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+H NQL  LP  IG L  L+ LD+  N L +LPK I   ++L+ L+ + N
Sbjct: 229 GQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQRLDLHQN 288

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L ++ N++  LP+ +  L +LRVLD   N L +LP+++  L 
Sbjct: 289 QLTTLPKEIG-QLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQ 347

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+VL +  N   L TLP  IG L +L  L +  N++TTLP  IG L+ LQ+L L+ N L
Sbjct: 348 SLQVLALGSN--RLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQL 405

Query: 188 VSPPMDVVE-QGLSAVKGYLS 207
            + P ++ + + L  +  YL+
Sbjct: 406 TTFPKEIRQLKNLQELHLYLN 426



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/184 (38%), Positives = 107/184 (58%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V  LD+   +L  LP  IG L  L+ LD+S N L +LPK +    +L+ L+ + N+L 
Sbjct: 48  LKVRTLDLRYQKLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLA 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG +L NL+ L +N NK+  LP+ +  L +L+ LD   N L +LP+++  L NL+
Sbjct: 108 TLPMEIG-QLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLK 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+      L TLP  IG L +L  L++  N++TTLP  IG L+ L+ L L  N + + 
Sbjct: 167 TLNLI--VTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITAL 224

Query: 191 PMDV 194
           P ++
Sbjct: 225 PKEI 228



 Score =  100 bits (250), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 107/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  N L  LP  +G L  L+ LD+  N L +LP  I   ++L+EL+ N N
Sbjct: 68  GQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  LP  I  +L NL+ L ++ N++  LP+ +  L +L+ L+  +  L +LP+++  L 
Sbjct: 128 KLTTLPKEIR-QLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQ 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+  N   L TLP  IG L +L  L +  N+IT LP  IG L+ LQ L L  N L
Sbjct: 187 NLKTLNLLDN--QLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQL 244

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 245 TTLPKEI 251



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+ +L +  N++  LP  IG L  L+ LD+  N L +LPK I   ++L+ L+ + N
Sbjct: 206 GELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQN 265

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L ++ N++  LP+ +  L +L+ L    N L +LP+++E L 
Sbjct: 266 QLTTLPKEIG-QLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQ 324

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL VL++  N   L TLP  +  L SL  L +  N+++TLP  IG L+ LQ L L  N L
Sbjct: 325 NLRVLDLDNN--QLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQL 382

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 383 TTLPKEI 389



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/162 (37%), Positives = 97/162 (59%), Gaps = 3/162 (1%)

Query: 35  KLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
           K++ LD+    L  LPK I   R+L+EL+ +FN L  LP  +G +L NL+ L ++ N++ 
Sbjct: 49  KVRTLDLRYQKLTILPKEIGQLRNLQELDLSFNSLTTLPKEVG-QLENLQRLDLHQNRLA 107

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSL 154
            LP  +  L +L+ LD   N L +LP+++  L NL+ L++ +N   L TLP  IG L +L
Sbjct: 108 TLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRN--QLTTLPKEIGQLQNL 165

Query: 155 VELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
             L++   ++TTLP  IG L+ L+ L+L  N L + P ++ E
Sbjct: 166 KTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGE 207



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 85/149 (57%), Gaps = 3/149 (2%)

Query: 48  SLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
            L K ++N   +  L+  + KL  LP  IG +L NL+ L ++ N +  LP+ +  L +L+
Sbjct: 39  DLAKALQNPLKVRTLDLRYQKLTILPKEIG-QLRNLQELDLSFNSLTTLPKEVGQLENLQ 97

Query: 108 VLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
            LD   N L +LP ++  L NL+ L+++ N   L TLP  I  L +L ELD+  N++TTL
Sbjct: 98  RLDLHQNRLATLPMEIGQLKNLQELDLNSN--KLTTLPKEIRQLRNLQELDLHRNQLTTL 155

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           P  IG L+ L+ L+L    L + P ++ E
Sbjct: 156 PKEIGQLQNLKTLNLIVTQLTTLPKEIGE 184


>gi|418701699|ref|ZP_13262621.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759263|gb|EKR25478.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 498

 Score =  118 bits (296), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 115/187 (61%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+H N+L  LP  IG L  L+ LD++ N L +LPK I   R+L+EL+ + N
Sbjct: 160 GQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRN 219

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NLKTL++   ++  LP+ +  L +L+ L+   N L +LP+++  L 
Sbjct: 220 QLTTLPKEIG-QLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQ 278

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NLE+L + +N   +  LP  IG L +L  LD+  N++TTLP  IG L+ LQ+L L  N L
Sbjct: 279 NLEILVLREN--RITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQL 336

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 337 TTLPKEI 343



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/182 (41%), Positives = 108/182 (59%), Gaps = 3/182 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+H NQL  LP  IG L  L+ LD+  N L +LPK I   ++L+EL  + N
Sbjct: 298 GQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDEN 357

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L ++ N++  LP+ +  L SL+VL    N L +LP+++  L 
Sbjct: 358 QLTTLPKEIE-QLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQ 416

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+VL +  N   L TLP  IG L +L EL +  N++TT P  I  L+ LQ+L L  NPL
Sbjct: 417 NLQVLGLISN--QLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPL 474

Query: 188 VS 189
            S
Sbjct: 475 SS 476



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 75/201 (37%), Positives = 119/201 (59%), Gaps = 4/201 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+ +L +  N++  LP  IG L  L+ LD+  N L +LPK I   ++L+ L+ + N
Sbjct: 275 GELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQN 334

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L ++ N++  LP+ +  L +LRVLD   N L +LP+++  L 
Sbjct: 335 QLTTLPKEIG-QLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQ 393

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+VL +  N   L TLP  IG L +L  L +  N++TTLP  IG L+ LQ+L L+ N L
Sbjct: 394 SLQVLALGSN--RLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQL 451

Query: 188 VSPPMDVVE-QGLSAVKGYLS 207
            + P ++ + + L  +  YL+
Sbjct: 452 TTFPKEIRQLKNLQELHLYLN 472



 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 112/189 (59%), Gaps = 3/189 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  N L  LP  +G L  L+ L+++   L +LPK I   R+L+EL+ +FN
Sbjct: 91  GQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFN 150

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP  +G +L NL+ L ++ N++  LP  +  L +L+ LD   N L +LP+++  L 
Sbjct: 151 SLTTLPKEVG-QLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLR 209

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++ +N   L TLP  IG L +L  L++   ++TTLP  IG L+ L+ L+L  N L
Sbjct: 210 NLQELDLHRN--QLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQL 267

Query: 188 VSPPMDVVE 196
            + P ++ E
Sbjct: 268 TTLPKEIGE 276



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/189 (39%), Positives = 109/189 (57%), Gaps = 3/189 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  N L  LP  IG L  L+ LD+S N L +LPK +    +L+ LN N  
Sbjct: 68  GQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQ 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  LP  IG +L NL+ L ++ N +  LP+ +  L +L+ LD   N L +LP ++  L 
Sbjct: 128 KLTTLPKEIG-QLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLK 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L+++ N   L TLP  I  L +L ELD+  N++TTLP  IG L+ L+ L+L    L
Sbjct: 187 NLQELDLNSN--KLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQL 244

Query: 188 VSPPMDVVE 196
            + P ++ E
Sbjct: 245 TTLPKEIGE 253



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 89/147 (60%), Gaps = 3/147 (2%)

Query: 48  SLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
            L K ++N   +  L+  + KL  LP  IG +L NL+ L ++ N + ILP+ +  L +L+
Sbjct: 39  DLAKALQNPLKVRTLDLRYQKLTILPKEIG-QLQNLQRLDLSFNSLTILPKEIGQLRNLQ 97

Query: 108 VLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
            LD   N L +LP+++  L NL+ LN+  N Q L TLP  IG L +L ELD+S+N +TTL
Sbjct: 98  ELDLSFNSLTTLPKEVGQLENLQRLNL--NSQKLTTLPKEIGQLRNLQELDLSFNSLTTL 155

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P  +G L  LQ+L L  N L + PM++
Sbjct: 156 PKEVGQLENLQRLDLHQNRLATLPMEI 182


>gi|418712123|ref|ZP_13272868.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791390|gb|EKR85066.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 475

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 115/187 (61%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+H N+L  LP  IG L  L+ LD++ N L +LPK I   R+L+EL+ + N
Sbjct: 137 GQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRN 196

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NLKTL++   ++  LP+ +  L +L+ L+   N L +LP+++  L 
Sbjct: 197 QLTTLPKEIG-QLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQ 255

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NLE+L + +N   +  LP  IG L +L  LD+  N++TTLP  IG L+ LQ+L L  N L
Sbjct: 256 NLEILVLREN--RITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQL 313

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 314 TTLPKEI 320



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/182 (41%), Positives = 108/182 (59%), Gaps = 3/182 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+H NQL  LP  IG L  L+ LD+  N L +LPK I   ++L+EL  + N
Sbjct: 275 GQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDEN 334

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L ++ N++  LP+ +  L SL+VL    N L +LP+++  L 
Sbjct: 335 QLTTLPKEIE-QLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQ 393

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+VL +  N   L TLP  IG L +L EL +  N++TT P  I  L+ LQ+L L  NPL
Sbjct: 394 NLQVLGLISN--QLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPL 451

Query: 188 VS 189
            S
Sbjct: 452 SS 453



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 75/201 (37%), Positives = 119/201 (59%), Gaps = 4/201 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+ +L +  N++  LP  IG L  L+ LD+  N L +LPK I   ++L+ L+ + N
Sbjct: 252 GELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQN 311

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L ++ N++  LP+ +  L +LRVLD   N L +LP+++  L 
Sbjct: 312 QLTTLPKEIG-QLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQ 370

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+VL +  N   L TLP  IG L +L  L +  N++TTLP  IG L+ LQ+L L+ N L
Sbjct: 371 SLQVLALGSN--RLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQL 428

Query: 188 VSPPMDVVE-QGLSAVKGYLS 207
            + P ++ + + L  +  YL+
Sbjct: 429 TTFPKEIRQLKNLQELHLYLN 449



 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 112/189 (59%), Gaps = 3/189 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  N L  LP  +G L  L+ L+++   L +LPK I   R+L+EL+ +FN
Sbjct: 68  GQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP  +G +L NL+ L ++ N++  LP  +  L +L+ LD   N L +LP+++  L 
Sbjct: 128 SLTTLPKEVG-QLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLR 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++ +N   L TLP  IG L +L  L++   ++TTLP  IG L+ L+ L+L  N L
Sbjct: 187 NLQELDLHRN--QLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQL 244

Query: 188 VSPPMDVVE 196
            + P ++ E
Sbjct: 245 TTLPKEIGE 253



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/186 (39%), Positives = 107/186 (57%), Gaps = 3/186 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V  LD+   +L  LP  IG L  L+ LD+S N L +LPK +    +L+ LN N  KL 
Sbjct: 48  LKVRTLDLRYQKLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLT 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG +L NL+ L ++ N +  LP+ +  L +L+ LD   N L +LP ++  L NL+
Sbjct: 108 TLPKEIG-QLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L+++ N   L TLP  I  L +L ELD+  N++TTLP  IG L+ L+ L+L    L + 
Sbjct: 167 ELDLNSN--KLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTL 224

Query: 191 PMDVVE 196
           P ++ E
Sbjct: 225 PKEIGE 230


>gi|429961331|gb|ELA40876.1| hypothetical protein VICG_02090, partial [Vittaforma corneae ATCC
           50505]
          Length = 728

 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 79/190 (41%), Positives = 115/190 (60%), Gaps = 3/190 (1%)

Query: 5   SLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNA 64
           ++   L N+  LD+  N+LK LP++IG L  L++L    N  ESLP  +   R+L ELN 
Sbjct: 224 AVIGNLTNLQELDLDHNKLKTLPDTIGELKDLRILSFIHNEFESLPTKVIELRNLRELNF 283

Query: 65  NFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLE 124
           + NKL+ LP  IG EL NL+ L ++ N +  LP ++  L  LR L    N L+SLP  + 
Sbjct: 284 DDNKLKLLPVEIG-ELKNLQKLYLSGNNLKTLPDTIGGLKDLRELSLSGNELESLPAVIG 342

Query: 125 NLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEG 184
           NL+NL+ LN+  N   L+TLP +IG L +L +L +  +K+  LP +IG L  LQKL L G
Sbjct: 343 NLVNLQYLNLDHN--KLKTLPDTIGELKNLRKLYLGGSKLEILPVAIGELENLQKLHLSG 400

Query: 185 NPLVSPPMDV 194
           N L + P+++
Sbjct: 401 NKLETLPIEI 410



 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/214 (37%), Positives = 121/214 (56%), Gaps = 24/214 (11%)

Query: 5   SLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNA 64
           ++   L+N+  LD+H N LK LP  I  L  L+ L++  N  ESLP  I N  +L+EL+ 
Sbjct: 178 AVIGNLINLQDLDLHENSLKTLPTEIEKLKSLQKLNLQNNRFESLPAVIGNLTNLQELDL 237

Query: 65  NFNKLRQLPDTIG----------------------FELINLKTLSINCNKIVILPQSLTH 102
           + NKL+ LPDTIG                       EL NL+ L+ + NK+ +LP  +  
Sbjct: 238 DHNKLKTLPDTIGELKDLRILSFIHNEFESLPTKVIELRNLRELNFDDNKLKLLPVEIGE 297

Query: 103 LTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYN 162
           L +L+ L    N LK+LP+ +  L +L  L++S N   LE+LP  IG L++L  L++ +N
Sbjct: 298 LKNLQKLYLSGNNLKTLPDTIGGLKDLRELSLSGN--ELESLPAVIGNLVNLQYLNLDHN 355

Query: 163 KITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           K+ TLPD+IG L+ L+KL L G+ L   P+ + E
Sbjct: 356 KLKTLPDTIGELKNLRKLYLGGSKLEILPVAIGE 389



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/176 (42%), Positives = 104/176 (59%), Gaps = 3/176 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  N+L+ LP  IG L  L+ LD+  N L++LP  IE  +SL++LN   N+   LP  
Sbjct: 166 LDLSGNKLESLPAVIGNLINLQDLDLHENSLKTLPTEIEKLKSLQKLNLQNNRFESLPAV 225

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L NL+ L ++ NK+  LP ++  L  LR+L    N  +SLP  +  L NL  LN  
Sbjct: 226 IG-NLTNLQELDLDHNKLKTLPDTIGELKDLRILSFIHNEFESLPTKVIELRNLRELNFD 284

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            N   L+ LP  IG L +L +L +S N + TLPD+IG L+ L++LSL GN L S P
Sbjct: 285 DN--KLKLLPVEIGELKNLQKLYLSGNNLKTLPDTIGGLKDLRELSLSGNELESLP 338



 Score =  110 bits (275), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 116/187 (62%), Gaps = 3/187 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+ VL ++ N+LK LP+ IG L  L+ L +S N L+ LP  +   +SL++L+   N+ 
Sbjct: 91  LENLKVLFLNVNRLKLLPDEIGKLVSLQELCLSCNELKLLPAKMVELKSLQKLDLWKNRF 150

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            + P+ +G EL +L+ L ++ NK+  LP  + +L +L+ LD   N LK+LP ++E L +L
Sbjct: 151 EKFPNVVG-ELKSLQELDLSGNKLESLPAVIGNLINLQDLDLHENSLKTLPTEIEKLKSL 209

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           + LN+  N    E+LP  IG L +L ELD+ +NK+ TLPD+IG L+ L+ LS   N   S
Sbjct: 210 QKLNLQNN--RFESLPAVIGNLTNLQELDLDHNKLKTLPDTIGELKDLRILSFIHNEFES 267

Query: 190 PPMDVVE 196
            P  V+E
Sbjct: 268 LPTKVIE 274



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 107/178 (60%), Gaps = 5/178 (2%)

Query: 16  LDVHSNQLKCLPNSI--GCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLP 73
           + +HS  ++ + + I     S++K L +S N LE+LP  +E   +L+ L  N N+L+ LP
Sbjct: 49  ISIHSKDIEYIDSYIRGSVKSEIKELVLSNNNLETLPPVMEELENLKVLFLNVNRLKLLP 108

Query: 74  DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLN 133
           D IG +L++L+ L ++CN++ +LP  +  L SL+ LD   N  +  P  +  L +L+ L+
Sbjct: 109 DEIG-KLVSLQELCLSCNELKLLPAKMVELKSLQKLDLWKNRFEKFPNVVGELKSLQELD 167

Query: 134 ISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           +S N   LE+LP  IG L++L +LD+  N + TLP  I  L+ LQKL+L+ N   S P
Sbjct: 168 LSGN--KLESLPAVIGNLINLQDLDLHENSLKTLPTEIEKLKSLQKLNLQNNRFESLP 223



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 112/196 (57%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +  +L+++  L +  N+LK LP  +  L  L+ LD+  N  E  P  +   +SL+
Sbjct: 106 LLPDEI-GKLVSLQELCLSCNELKLLPAKMVELKSLQKLDLWKNRFEKFPNVVGELKSLQ 164

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ + NKL  LP  IG  LINL+ L ++ N +  LP  +  L SL+ L+ + N  +SLP
Sbjct: 165 ELDLSGNKLESLPAVIG-NLINLQDLDLHENSLKTLPTEIEKLKSLQKLNLQNNRFESLP 223

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             + NL NL+ L++  N   L+TLP +IG L  L  L   +N+  +LP  +  LR L++L
Sbjct: 224 AVIGNLTNLQELDLDHN--KLKTLPDTIGELKDLRILSFIHNEFESLPTKVIELRNLREL 281

Query: 181 SLEGNPLVSPPMDVVE 196
           + + N L   P+++ E
Sbjct: 282 NFDDNKLKLLPVEIGE 297



 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 52/89 (58%)

Query: 5   SLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNA 64
           ++   L+N+  L++  N+LK LP++IG L  L+ L + G+ LE LP  I    +L++L+ 
Sbjct: 339 AVIGNLVNLQYLNLDHNKLKTLPDTIGELKNLRKLYLGGSKLEILPVAIGELENLQKLHL 398

Query: 65  NFNKLRQLPDTIGFELINLKTLSINCNKI 93
           + NKL  LP  I     +L+ L++  N I
Sbjct: 399 SGNKLETLPIEIEKLSGSLRLLNLRGNNI 427


>gi|421091300|ref|ZP_15552074.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|409999904|gb|EKO50586.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 400

 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/184 (42%), Positives = 114/184 (61%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VLD+   +LK LPN IG L  L+ L +  N L +LP  I   ++L+ LN + N+L 
Sbjct: 46  LDVRVLDLSEQKLKTLPNEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTLNLDTNQLT 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ IG +LINL+TL +  N++VILP+ +  L +LRVL    N LK LP+++  L NL+
Sbjct: 106 TLPNEIG-QLINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKEIGQLENLQ 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++  N   L+ LP  IG L +L  LD+S N +T LP  IG L+ L++L L  N L + 
Sbjct: 165 TLDLYAN--QLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLKNLRELYLSSNQLKTL 222

Query: 191 PMDV 194
           P ++
Sbjct: 223 PKEI 226



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/187 (41%), Positives = 111/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+++NQLK LPN IG L  L+ LD+S N+L  LPK I   ++L EL  + N
Sbjct: 158 GQLENLQTLDLYANQLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLKNLRELYLSSN 217

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG +L NL+TL ++ N++  LP  +  L +L  L    N L +LP+++  L 
Sbjct: 218 QLKTLPKEIG-QLENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKNLLTTLPKEVGQLK 276

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L++S N   L TLP  IG L +L EL +  N+ T LP  I  L+ LQ L L  N L
Sbjct: 277 NLPTLDLSNN--RLTTLPKEIGQLKNLRELYLGTNQFTALPKEIRQLQNLQVLFLNNNQL 334

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 335 KTLPNEI 341



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/187 (40%), Positives = 112/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L+N+  LD+  NQL  LP  I  L  L+VL +S N L+ LPK I    +L+ L+   N
Sbjct: 112 GQLINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKEIGQLENLQTLDLYAN 171

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP+ IG +L NL+TL ++ N + ILP+ +  L +LR L    N LK+LP+++  L 
Sbjct: 172 QLKALPNEIG-QLKNLQTLDLSKNILTILPKEIGQLKNLRELYLSSNQLKTLPKEIGQLE 230

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++S N   L TLP  IG L +L EL +  N +TTLP  +G L+ L  L L  N L
Sbjct: 231 NLQTLHLSDN--QLTTLPNEIGQLKNLYELYLGKNLLTTLPKEVGQLKNLPTLDLSNNRL 288

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 289 TTLPKEI 295



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/187 (40%), Positives = 110/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++ +NQL  LPN IG L  L+ LD+  N L  LPK I   ++L  L  + N
Sbjct: 89  GQLKNLQTLNLDTNQLTTLPNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNN 148

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG +L NL+TL +  N++  LP  +  L +L+ LD   N L  LP+++  L 
Sbjct: 149 QLKILPKEIG-QLENLQTLDLYANQLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLK 207

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L +S N   L+TLP  IG L +L  L +S N++TTLP+ IG L+ L +L L  N L
Sbjct: 208 NLRELYLSSN--QLKTLPKEIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKNLL 265

Query: 188 VSPPMDV 194
            + P +V
Sbjct: 266 TTLPKEV 272



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + +NQL  LPN IG L  L+ L++  N L +LP  I    +L+ L+   N
Sbjct: 66  GQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTLNLDTNQLTTLPNEIGQLINLQTLDLIHN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L ++ N++ ILP+ +  L +L+ LD   N LK+LP ++  L 
Sbjct: 126 QLVILPKEIN-QLQNLRVLGLSNNQLKILPKEIGQLENLQTLDLYANQLKALPNEIGQLK 184

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++S+N   L  LP  IG L +L EL +S N++ TLP  IG L  LQ L L  N L
Sbjct: 185 NLQTLDLSKNI--LTILPKEIGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQL 242

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 243 TTLPNEI 249



 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 74/200 (37%), Positives = 111/200 (55%), Gaps = 3/200 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + SNQLK LP  IG L  L+ L +S N L +LP  I   ++L EL    N
Sbjct: 204 GQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKN 263

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP  +G +L NL TL ++ N++  LP+ +  L +LR L    N   +LP+++  L 
Sbjct: 264 LLTTLPKEVG-QLKNLPTLDLSNNRLTTLPKEIGQLKNLRELYLGTNQFTALPKEIRQLQ 322

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+VL ++ N   L+TLP  I  L +L  LD++ N++ TLP  I  L+ LQ+L L+ N L
Sbjct: 323 NLQVLFLNNN--QLKTLPNEIEKLQNLQVLDLNDNQLKTLPKEIEKLQNLQRLYLQYNQL 380

Query: 188 VSPPMDVVEQGLSAVKGYLS 207
            S   + + + L   + Y  
Sbjct: 381 SSEEKERIRKLLPKCQIYFE 400



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 81/147 (55%), Gaps = 3/147 (2%)

Query: 48  SLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
            L K ++N   +  L+ +  KL+ LP+ IG +L NL+TL +  N++  LP  +  L +L+
Sbjct: 37  DLTKALKNPLDVRVLDLSEQKLKTLPNEIG-QLQNLQTLYLWNNQLTTLPNEIGQLKNLQ 95

Query: 108 VLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+   N L +LP ++  LINL+ L++  N   L  LP  I  L +L  L +S N++  L
Sbjct: 96  TLNLDTNQLTTLPNEIGQLINLQTLDLIHN--QLVILPKEINQLQNLRVLGLSNNQLKIL 153

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P  IG L  LQ L L  N L + P ++
Sbjct: 154 PKEIGQLENLQTLDLYANQLKALPNEI 180


>gi|410941458|ref|ZP_11373255.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
 gi|410783407|gb|EKR72401.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
          Length = 425

 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 132/228 (57%), Gaps = 13/228 (5%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL++  NQL  LPN +G L  L+VL++  N L  LPK I   R+L+ LN  FN
Sbjct: 68  GKLQNLQVLNLGFNQLTTLPNEVGQLQNLQVLNLYSNKLTILPKEIGKLRNLQVLNLGFN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LPD +G +L NL+ L+++ NK+ ILP+ +  L  L++LD   N L + P+++  L 
Sbjct: 128 RLTILPDEVG-QLQNLQELNLDLNKLTILPEEIGQLQKLQILDLEGNQLTTFPKEIGKLQ 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+VLN+   F  L TL   +  L +L  L++  N +TTLP  IG L+KLQ+L+L    L
Sbjct: 187 KLQVLNLG--FNQLTTLREEVVQLQNLQILNLISNPLTTLPKEIGQLQKLQELNLYDIQL 244

Query: 188 VSPPMDVVEQGLSAVKGYLSEKMNNDHKS--PKKKSWVGKLVK---YG 230
            + P  +++  L  ++G     +N  H +  PK+   + KL K   YG
Sbjct: 245 KTLPQGIIQ--LQNLRGL---NLNYTHLTILPKEIGQLSKLQKLYLYG 287



 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 113/209 (54%), Gaps = 22/209 (10%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L++ SN L  LP  IG L KL+ L++    L++LP+ I   ++L  LN N+ 
Sbjct: 206 VQLQNLQILNLISNPLTTLPKEIGQLQKLQELNLYDIQLKTLPQGIIQLQNLRGLNLNYT 265

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP  IG +L  L+ L +  N++  LP+ +  L  L+ L    N L++LP+++E L 
Sbjct: 266 HLTILPKEIG-QLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQ 324

Query: 128 NLEVLNISQN---------------------FQYLETLPYSIGLLMSLVELDVSYNKITT 166
            L+ L++  N                     F  L TLP  IG L +L EL++ +N++ T
Sbjct: 325 KLQTLHLESNQITTFPKEIGQLQNLQELNLGFNQLTTLPKEIGQLQNLQELNLKFNQLAT 384

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
           LP  IG  +KL+KL+L  NP+ S  ++ +
Sbjct: 385 LPKEIGQQQKLRKLNLYNNPIASEKIERI 413



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 109/183 (59%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V +L+++ ++L  L   IG L  L+VL++  N L +LP  +   ++L+ LN   NKL  
Sbjct: 49  DVRILNLNGSKLATLSKEIGKLQNLQVLNLGFNQLTTLPNEVGQLQNLQVLNLYSNKLTI 108

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ L++  N++ ILP  +  L +L+ L+  LN L  LPE++  L  L++
Sbjct: 109 LPKEIG-KLRNLQVLNLGFNRLTILPDEVGQLQNLQELNLDLNKLTILPEEIGQLQKLQI 167

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L++  N   L T P  IG L  L  L++ +N++TTL + +  L+ LQ L+L  NPL + P
Sbjct: 168 LDLEGN--QLTTFPKEIGKLQKLQVLNLGFNQLTTLREEVVQLQNLQILNLISNPLTTLP 225

Query: 192 MDV 194
            ++
Sbjct: 226 KEI 228



 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 3/115 (2%)

Query: 81  INLKTLSINCNK-IVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           +N ++++I  NK + IL   +     L+         ++L E L+N  ++ +LN+  N  
Sbjct: 1   MNFQSINIRLNKKLTILLILICFSCKLQAQSKETQTYRNLTEALQNPKDVRILNL--NGS 58

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L TL   IG L +L  L++ +N++TTLP+ +G L+ LQ L+L  N L   P ++
Sbjct: 59  KLATLSKEIGKLQNLQVLNLGFNQLTTLPNEVGQLQNLQVLNLYSNKLTILPKEI 113


>gi|417776852|ref|ZP_12424684.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410573348|gb|EKQ36398.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
          Length = 265

 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/186 (39%), Positives = 119/186 (63%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ +LD+  NQ K +P  I  L  L++LD+  N  +++PK IE  ++L+ L+  +N+
Sbjct: 71  QLKNLQMLDLCYNQFKTVPKKIEQLKNLQMLDLCYNQFKTVPKKIEQLKNLQMLDLCYNQ 130

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
            + +P  IG +L NL+ L+++ N++  LP+ +  L +L+VL+   N LK+LP+ +E L N
Sbjct: 131 FKTVPKKIG-QLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKN 189

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +  N+  L TLP  IG L SL EL + +N+I TLPD I  L+ L+KL+L  NP+ 
Sbjct: 190 LQTLYL--NYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQNLRKLTLYENPI- 246

Query: 189 SPPMDV 194
            PP ++
Sbjct: 247 -PPQEL 251



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 62/102 (60%), Gaps = 1/102 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL++ SNQL  LP  IG L  L+VL++  N L++LPK IE  ++L+ L  N+N
Sbjct: 139 GQLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYN 198

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           +L  LP  IG  L +L  L +  N+I  LP  +  L +LR L
Sbjct: 199 QLTTLPREIG-RLQSLTELHLQHNQIATLPDEIIQLQNLRKL 239



 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 21/120 (17%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN------------------ 137
           L ++L +   +R+L      L +LP+ +E L NL++L++  N                  
Sbjct: 42  LTEALQNSLDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKKIEQLKNLQML 101

Query: 138 ---FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
              +   +T+P  I  L +L  LD+ YN+  T+P  IG L+ LQ L+L  N L + P ++
Sbjct: 102 DLCYNQFKTVPKKIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEI 161



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L E L+N +++ +L +S+  Q L TLP  I  L +L  LD+ YN+  T+P  I  L+ 
Sbjct: 40  RDLTEALQNSLDVRILILSE--QKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKKIEQLKN 97

Query: 177 LQKLSLEGNPLVSPPMDV 194
           LQ L L  N   + P  +
Sbjct: 98  LQMLDLCYNQFKTVPKKI 115


>gi|456825364|gb|EMF73760.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 266

 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 76/199 (38%), Positives = 122/199 (61%), Gaps = 3/199 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ +LD+  NQ K +P  I  L  L++LD+  N  +++PK I   ++L+ LN + N+
Sbjct: 71  QLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQ 130

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG +L NL+ L+++ N+++ LP+ +  L +L+VL+   N LK+LP+ +E L N
Sbjct: 131 LTTLPKEIG-KLENLQVLNLSSNQLITLPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKN 189

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +  N+  L TLP  IG L SL EL + +N+I TLPD I  L+ L+KL+L  NP+ 
Sbjct: 190 LQTLYL--NYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQNLRKLTLYENPIP 247

Query: 189 SPPMDVVEQGLSAVKGYLS 207
              +D + + L   + Y  
Sbjct: 248 PQELDKIRKLLPKCQVYFK 266



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/130 (40%), Positives = 79/130 (60%), Gaps = 1/130 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL++ SNQL  LP  IG L  L+VL++S N L +LPK I    +L+ LN   N
Sbjct: 116 GQLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQLITLPKEIGKLENLQVLNLGSN 175

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  I  +L NL+TL +N N++  LP+ +  L SL  L  + N + +LP+++  L 
Sbjct: 176 RLKTLPKGIE-QLKNLQTLYLNYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQ 234

Query: 128 NLEVLNISQN 137
           NL  L + +N
Sbjct: 235 NLRKLTLYEN 244



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R+L      L +LP+ +E L NL++L++  N    +T+P  I  L +L 
Sbjct: 42  LTEALQNSLDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYN--QFKTVPKEIEQLKNLQ 99

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LD+ YN+  T+P  IG L+ LQ L+L  N L + P ++
Sbjct: 100 MLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEI 138



 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L E L+N +++ +L +S+  Q L TLP  I  L +L  LD+ YN+  T+P  I  L+ 
Sbjct: 40  RDLTEALQNSLDVRILILSE--QKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKN 97

Query: 177 LQKLSLEGNPLVSPPMDV 194
           LQ L L  N   + P  +
Sbjct: 98  LQMLDLCYNQFKTVPKKI 115


>gi|421137163|ref|ZP_15597251.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410018657|gb|EKO85494.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
          Length = 313

 Score =  117 bits (293), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 73/186 (39%), Positives = 112/186 (60%), Gaps = 3/186 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L++  NQL  LP  IG L  L+VL+++GN   SLPK I   ++LE L+ + N+   
Sbjct: 18  NLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTS 77

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ L++  N++  LP+ +  L +L  LD   N   SLP+++  L NL V
Sbjct: 78  LPKEIG-QLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLDGNQFTSLPKEIGQLQNLRV 136

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LN++ N   L +LP  IG L +L  LD++ N+ T+LP  IG L+KL+ L+L+ N     P
Sbjct: 137 LNLAGN--QLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFP 194

Query: 192 MDVVEQ 197
            ++ +Q
Sbjct: 195 KEIRQQ 200



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 105/178 (58%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQ   LP  IG L  L+VL+++GN L SLPK I   ++LE L+   N
Sbjct: 106 GQLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGN 165

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP  IG +L  L+ L+++ N+  I P+ +    SL+ L    + LK+LP+++  L 
Sbjct: 166 QFTSLPKEIG-QLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQ 224

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ L++  N   L +LP  IG L +L EL++  NK+ TLP  IG L+KL+ L L  N
Sbjct: 225 NLQSLHLDSN--QLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIGQLQKLEVLRLYSN 280



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 106/188 (56%), Gaps = 3/188 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL++  NQ   LP  IG L  L+ LD+ GN   SLPK I   ++L  LN   N
Sbjct: 37  GQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGN 96

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L ++ N+   LP+ +  L +LRVL+   N L SLP+++  L 
Sbjct: 97  QLTSLPKEIG-QLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQ 155

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NLE L+++ N     +LP  IG L  L  L++ +N+ T  P  I   + L+ L L G+ L
Sbjct: 156 NLERLDLAGN--QFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQL 213

Query: 188 VSPPMDVV 195
            + P +++
Sbjct: 214 KTLPKEIL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/220 (34%), Positives = 117/220 (53%), Gaps = 23/220 (10%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQ   LP  IG L  L+VL+++GN L SLPK I   ++LE L+ + N
Sbjct: 60  GQLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLDGN 119

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP  IG +L NL+ L++  N++  LP+ +  L +L  LD   N   SLP+++  L 
Sbjct: 120 QFTSLPKEIG-QLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQ 178

Query: 128 NLEVLNISQN---------------------FQYLETLPYSIGLLMSLVELDVSYNKITT 166
            LE LN+  N                        L+TLP  I LL +L  L +  N++T+
Sbjct: 179 KLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLTS 238

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGLSAVKGY 205
           LP  IG L+ L +L+L+ N L + P ++ + Q L  ++ Y
Sbjct: 239 LPKEIGQLQNLFELNLQDNKLKTLPKEIGQLQKLEVLRLY 278



 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/183 (38%), Positives = 108/183 (59%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           ++L+ LP  IG    L+ L++ GN L SLPK I   ++L  LN   N+   LP  IG +L
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG-QL 62

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            NL+ L ++ N+   LP+ +  L +LRVL+   N L SLP+++  L NLE L++  N   
Sbjct: 63  QNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLDGN--Q 120

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
             +LP  IG L +L  L+++ N++T+LP  IG L+ L++L L GN   S P ++ + Q L
Sbjct: 121 FTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKL 180

Query: 200 SAV 202
            A+
Sbjct: 181 EAL 183



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 2/82 (2%)

Query: 113 LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
           L+ L+SLP  +    NLE LN+  N   L +LP  IG L +L  L+++ N+ T+LP  IG
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGN--QLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60

Query: 173 CLRKLQKLSLEGNPLVSPPMDV 194
            L+ L++L L+GN   S P ++
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEI 82


>gi|456875041|gb|EMF90275.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 528

 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 79/193 (40%), Positives = 116/193 (60%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +   L N+  L +HSNQL  +P  IG L KL+ LD+  N L  LPK I N + L+ 
Sbjct: 301 VPEEI-GNLQNLQKLSLHSNQLTIIPKEIGNLQKLEELDLGQNQLTILPKEIGNLQKLQT 359

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   NKL  LP  IG +L N +TL +N N++  LP+ + +L  L+ L    N L ++P+
Sbjct: 360 LDLGNNKLTALPKEIG-KLQNPQTLYLNRNQLTTLPKEIGNLQKLKWLYLAHNNLATIPQ 418

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++ +L +L+VL ++ N   L TLP  IG L +L  L++  N++TTLP  IG LR L+ L 
Sbjct: 419 EIGSLQSLQVLTLNSN--RLTTLPKEIGNLQNLQGLNLDKNQLTTLPKEIGKLRNLESLD 476

Query: 182 LEGNPLVSPPMDV 194
           L  NPL S P ++
Sbjct: 477 LSENPLTSFPEEI 489



 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 110/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQL  LP  IG L  L+ L+++ N L +LPK I N + L+EL    N
Sbjct: 99  GKLQNLEELDLGQNQLTTLPEEIGKLQNLQKLNLNQNQLTTLPKEIGNLQKLQELYLGDN 158

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP  IG +L  L+ L +  N++  LP+ +  L  L+ LD  +N L +LP+++ NL 
Sbjct: 159 QFATLPKAIG-KLQKLQELDLGINQLTTLPKEIEKLQKLQELDLGINQLTTLPKEIGNLQ 217

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ LN++ N   L  LP  IG L  L  L++++N++TTLP  IG L+ LQ+L L  N L
Sbjct: 218 KLQTLNLNHN--QLTNLPKEIGKLQKLQTLNLNHNQLTTLPKEIGNLQNLQQLYLYSNQL 275

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 276 TTLPKEI 282



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 104/179 (58%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  NQL  LP  IG L KL+ L+++ N L +LPK I   + L+ LN N N+L  LP  
Sbjct: 199 LDLGINQLTTLPKEIGNLQKLQTLNLNHNQLTNLPKEIGKLQKLQTLNLNHNQLTTLPKE 258

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L NL+ L +  N++  LP+ +  L  L+ L    N L S+PE++ NL NL+ L++ 
Sbjct: 259 IG-NLQNLQQLYLYSNQLTTLPKEIEKLQKLQELHLSDNQLTSVPEEIGNLQNLQKLSLH 317

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L  +P  IG L  L ELD+  N++T LP  IG L+KLQ L L  N L + P ++
Sbjct: 318 SN--QLTIIPKEIGNLQKLEELDLGQNQLTILPKEIGNLQKLQTLDLGNNKLTALPKEI 374



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/185 (38%), Positives = 111/185 (60%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+ +L + SNQL  LP  +G L  L+ LD+  N L +LP+ I   ++L++LN N N+L
Sbjct: 78  LQNLKILGLGSNQLTTLPKEVGKLQNLEELDLGQNQLTTLPEEIGKLQNLQKLNLNQNQL 137

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  IG  L  L+ L +  N+   LP+++  L  L+ LD  +N L +LP+++E L  L
Sbjct: 138 TTLPKEIG-NLQKLQELYLGDNQFATLPKAIGKLQKLQELDLGINQLTTLPKEIEKLQKL 196

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           + L++  N   L TLP  IG L  L  L++++N++T LP  IG L+KLQ L+L  N L +
Sbjct: 197 QELDLGIN--QLTTLPKEIGNLQKLQTLNLNHNQLTNLPKEIGKLQKLQTLNLNHNQLTT 254

Query: 190 PPMDV 194
            P ++
Sbjct: 255 LPKEI 259



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/175 (39%), Positives = 103/175 (58%), Gaps = 3/175 (1%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +NQL  LP  I  L  LK+L +  N L +LPK +   ++LEEL+   N+L  LP+ IG +
Sbjct: 65  NNQLTTLPKEIENLQNLKILGLGSNQLTTLPKEVGKLQNLEELDLGQNQLTTLPEEIG-K 123

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+ L++N N++  LP+ + +L  L+ L    N   +LP+ +  L  L+ L++  N  
Sbjct: 124 LQNLQKLNLNQNQLTTLPKEIGNLQKLQELYLGDNQFATLPKAIGKLQKLQELDLGIN-- 181

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L TLP  I  L  L ELD+  N++TTLP  IG L+KLQ L+L  N L + P ++
Sbjct: 182 QLTTLPKEIEKLQKLQELDLGINQLTTLPKEIGNLQKLQTLNLNHNQLTNLPKEI 236



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/198 (36%), Positives = 108/198 (54%), Gaps = 21/198 (10%)

Query: 42  SGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLT 101
           S N L +LPK IEN ++L+ L    N+L  LP  +G +L NL+ L +  N++  LP+ + 
Sbjct: 64  SNNQLTTLPKEIENLQNLKILGLGSNQLTTLPKEVG-KLQNLEELDLGQNQLTTLPEEIG 122

Query: 102 HLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSY 161
            L +L+ L+   N L +LP+++ NL  L+ L +  N     TLP +IG L  L ELD+  
Sbjct: 123 KLQNLQKLNLNQNQLTTLPKEIGNLQKLQELYLGDN--QFATLPKAIGKLQKLQELDLGI 180

Query: 162 NKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLS--EKMNNDHKS--- 216
           N++TTLP  I  L+KLQ+L L  N L + P ++         G L   + +N +H     
Sbjct: 181 NQLTTLPKEIEKLQKLQELDLGINQLTTLPKEI---------GNLQKLQTLNLNHNQLTN 231

Query: 217 -PKKKSWVGKLVKYGTFN 233
            PK+   +GKL K  T N
Sbjct: 232 LPKE---IGKLQKLQTLN 246



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 3/97 (3%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +   L ++ VL ++SN+L  LP  IG L  L+ L++  N L +LPK I   R+LE 
Sbjct: 416 IPQEI-GSLQSLQVLTLNSNRLTTLPKEIGNLQNLQGLNLDKNQLTTLPKEIGKLRNLES 474

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ 98
           L+ + N L   P+ IG +L +LK L +  N   +LPQ
Sbjct: 475 LDLSENPLTSFPEEIG-KLQHLKWLRLE-NIPTLLPQ 509



 Score = 37.7 bits (86), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 32/106 (30%)

Query: 96  LPQSLTHLTSLRVLDARL-------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSI 148
           L ++L H T +RVL+          N L +LP+++ENL NL++L +              
Sbjct: 41  LTEALQHPTDVRVLNLEPQEGGNSNNQLTTLPKEIENLQNLKILGLG------------- 87

Query: 149 GLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
                        N++TTLP  +G L+ L++L L  N L + P ++
Sbjct: 88  ------------SNQLTTLPKEVGKLQNLEELDLGQNQLTTLPEEI 121


>gi|418720656|ref|ZP_13279852.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410742930|gb|EKQ91675.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
          Length = 251

 Score =  117 bits (292), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 83/240 (34%), Positives = 134/240 (55%), Gaps = 9/240 (3%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ L  R  N+  LD++SNQL  LPN IG L  L+ LD+  N L ++P  I   + L+
Sbjct: 7   VLPKEL-ERFKNLQKLDLYSNQLTILPNEIGQLQNLEELDLGANQLRTIPNEIGQLKDLQ 65

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ + N+L  LP+ IG +L NL++L +  N++  LP  +  L  LR L+   N L +LP
Sbjct: 66  ELHLDGNQLTILPNEIG-QLKNLRSLELYNNQLTALPNEIGQLKDLRSLELYNNQLTTLP 124

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E++  L NL+ L +++N   +  LP  +G L  L EL++S N++T LP  IG L+KL+ L
Sbjct: 125 EEIGRLKNLQKLYLNEN--QITILPNEVGNLSELEELNLSGNRLTNLPKEIGQLQKLRSL 182

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGALRNHR 240
            L  N L + P ++       +K      +  ++ SP++K  +  L+     +G L   R
Sbjct: 183 DLSNNQLTTLPKEI-----GHLKNLRRLVLKGNNFSPQEKERIRNLLLEYEIDGELLRRR 237



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/172 (36%), Positives = 101/172 (58%), Gaps = 3/172 (1%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELIN 82
           L  LP  +     L+ LD+  N L  LP  I   ++LEEL+   N+LR +P+ IG +L +
Sbjct: 5   LTVLPKELERFKNLQKLDLYSNQLTILPNEIGQLQNLEELDLGANQLRTIPNEIG-QLKD 63

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           L+ L ++ N++ ILP  +  L +LR L+   N L +LP ++  L +L  L +  N   L 
Sbjct: 64  LQELHLDGNQLTILPNEIGQLKNLRSLELYNNQLTALPNEIGQLKDLRSLELYNN--QLT 121

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           TLP  IG L +L +L ++ N+IT LP+ +G L +L++L+L GN L + P ++
Sbjct: 122 TLPEEIGRLKNLQKLYLNENQITILPNEVGNLSELEELNLSGNRLTNLPKEI 173


>gi|418678217|ref|ZP_13239491.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|400321407|gb|EJO69267.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
          Length = 377

 Score =  117 bits (292), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 115/193 (59%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L N+  L++  NQL  LPN IG L  L+ L +  N L +LP  I   ++L+ 
Sbjct: 153 IPKEI-GQLKNLQTLNLGYNQLTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQS 211

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+L  LP+ IG +L NL++L +  N++ ILP  +  L +L+ L  R N   +LP+
Sbjct: 212 LYLSTNRLTTLPNEIG-QLQNLQSLYLGSNQLTILPNEIGQLKNLQTLYLRYNQFTTLPK 270

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L NL+ L +  N+  L+TLP  IG L +L  LD+ YN+ T LP+ IG L+ LQ+L 
Sbjct: 271 EIGKLQNLQRLEL--NYNQLKTLPKGIGQLQNLQWLDLGYNQFTILPEEIGKLKNLQELY 328

Query: 182 LEGNPLVSPPMDV 194
           L  N L + P ++
Sbjct: 329 LRDNQLTTIPEEI 341



 Score =  110 bits (274), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 72/186 (38%), Positives = 109/186 (58%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L + SNQL  LPN IG L  L+VL+++ N  +++PK I   ++L+ LN  +N+
Sbjct: 113 KLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLGYNQ 172

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP+ IG +L NL++L +  N++  LP  +  L +L+ L    N L +LP ++  L N
Sbjct: 173 LTALPNEIG-QLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQLQN 231

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +  N   L  LP  IG L +L  L + YN+ TTLP  IG L+ LQ+L L  N L 
Sbjct: 232 LQSLYLGSN--QLTILPNEIGQLKNLQTLYLRYNQFTTLPKEIGKLQNLQRLELNYNQLK 289

Query: 189 SPPMDV 194
           + P  +
Sbjct: 290 TLPKGI 295



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 106/184 (57%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++ +N+ K LP  IG L  L+ L+++ N L  LPK I   ++L +LN   N+  
Sbjct: 46  LDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFT 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  +  +L NLK L +  N++  LP  +  L +LRVL+   N  K++P+++  L NL+
Sbjct: 106 ILPKEVE-KLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQ 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+  N   L  LP  IG L +L  L +  N++T LP+ IG L+ LQ L L  N L + 
Sbjct: 165 TLNLGYN--QLTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTL 222

Query: 191 PMDV 194
           P ++
Sbjct: 223 PNEI 226



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 105/187 (56%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L+++ NQL  LP  IG L  L+ L++  N    LPK +E   +L+EL    N
Sbjct: 66  GKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+ L +  N+   +P+ +  L +L+ L+   N L +LP ++  L 
Sbjct: 126 QLTTLPNEIG-QLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLGYNQLTALPNEIGQLK 184

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +  N   L  LP  IG L +L  L +S N++TTLP+ IG L+ LQ L L  N L
Sbjct: 185 NLQSLYLGSN--QLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNQL 242

Query: 188 VSPPMDV 194
              P ++
Sbjct: 243 TILPNEI 249



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 1/86 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L+++ NQLK LP  IG L  L+ LD+  N    LP+ I   ++L+EL    N
Sbjct: 273 GKLQNLQRLELNYNQLKTLPKGIGQLQNLQWLDLGYNQFTILPEEIGKLKNLQELYLRDN 332

Query: 68  KLRQLPDTIGFELINLKTLSINCNKI 93
           +L  +P+ IG +L NL+ L +  N++
Sbjct: 333 QLTTIPEEIG-QLQNLQELYLRDNQL 357


>gi|124009256|ref|ZP_01693936.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123985138|gb|EAY25077.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 306

 Score =  117 bits (292), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 75/175 (42%), Positives = 111/175 (63%), Gaps = 3/175 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +LD++ NQ+  LP SIG L  L  LD+  N L++LP  I    SL  L  N NKL+ LP+
Sbjct: 112 ILDLYDNQIAHLPASIGALHSLHKLDLYKNGLQALPYEIGQLASLTTLWLNENKLKALPE 171

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
           +IG +L +L+ L I+ N++ +LP+++ +LT+L+VLD R N L SLP  +  L NL  L++
Sbjct: 172 SIG-QLHHLQELDIHKNELSVLPEAIGNLTNLQVLDLRQNKLTSLPATIGQLQNLRELHL 230

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           S N   L TLP  IG L  L  L ++ N+I++LP+ I  L+ LQKL +  NP+ +
Sbjct: 231 SSN--RLTTLPPQIGELQGLWVLGIADNRISSLPEEIRQLQSLQKLYICNNPVAA 283



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/185 (40%), Positives = 109/185 (58%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+  L++  N+L  LP  I  L  L++LD+  N +  LP +I    SL +L+   N L
Sbjct: 84  LRNLQTLELRQNKLTTLPKEIMQLKALQILDLYDNQIAHLPASIGALHSLHKLDLYKNGL 143

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           + LP  IG +L +L TL +N NK+  LP+S+  L  L+ LD   N L  LPE + NL NL
Sbjct: 144 QALPYEIG-QLASLTTLWLNENKLKALPESIGQLHHLQELDIHKNELSVLPEAIGNLTNL 202

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           +VL++ QN   L +LP +IG L +L EL +S N++TTLP  IG L+ L  L +  N + S
Sbjct: 203 QVLDLRQN--KLTSLPATIGQLQNLRELHLSSNRLTTLPPQIGELQGLWVLGIADNRISS 260

Query: 190 PPMDV 194
            P ++
Sbjct: 261 LPEEI 265



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/190 (37%), Positives = 109/190 (57%), Gaps = 4/190 (2%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           LN   L +++++L  LP  IG L  L+ L++  N L +LPK I   ++L+ L+   N++ 
Sbjct: 62  LNQATLCLNNHKLTQLPTEIGLLRNLQTLELRQNKLTTLPKEIMQLKALQILDLYDNQIA 121

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP +IG  L +L  L +  N +  LP  +  L SL  L    N LK+LPE +  L +L+
Sbjct: 122 HLPASIG-ALHSLHKLDLYKNGLQALPYEIGQLASLTTLWLNENKLKALPESIGQLHHLQ 180

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L+I +N   L  LP +IG L +L  LD+  NK+T+LP +IG L+ L++L L  N L + 
Sbjct: 181 ELDIHKN--ELSVLPEAIGNLTNLQVLDLRQNKLTSLPATIGQLQNLRELHLSSNRLTTL 238

Query: 191 PMDVVE-QGL 199
           P  + E QGL
Sbjct: 239 PPQIGELQGL 248



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/130 (39%), Positives = 75/130 (57%), Gaps = 1/130 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++  L ++ N+LK LP SIG L  L+ LD+  N L  LP+ I N  +L+ L+   N
Sbjct: 151 GQLASLTTLWLNENKLKALPESIGQLHHLQELDIHKNELSVLPEAIGNLTNLQVLDLRQN 210

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  LP TIG +L NL+ L ++ N++  LP  +  L  L VL    N + SLPE++  L 
Sbjct: 211 KLTSLPATIG-QLQNLRELHLSSNRLTTLPPQIGELQGLWVLGIADNRISSLPEEIRQLQ 269

Query: 128 NLEVLNISQN 137
           +L+ L I  N
Sbjct: 270 SLQKLYICNN 279



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/108 (43%), Positives = 67/108 (62%), Gaps = 2/108 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+  +L ++  LD+H N+L  LP +IG L+ L+VLD+  N L SLP TI   ++L E
Sbjct: 169 LPESI-GQLHHLQELDIHKNELSVLPEAIGNLTNLQVLDLRQNKLTSLPATIGQLQNLRE 227

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           L+ + N+L  LP  IG EL  L  L I  N+I  LP+ +  L SL+ L
Sbjct: 228 LHLSSNRLTTLPPQIG-ELQGLWVLGIADNRISSLPEEIRQLQSLQKL 274



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 11/77 (14%)

Query: 137 NFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP----- 191
           N   L  LP  IGLL +L  L++  NK+TTLP  I  L+ LQ L L  N +   P     
Sbjct: 70  NNHKLTQLPTEIGLLRNLQTLELRQNKLTTLPKEIMQLKALQILDLYDNQIAHLPASIGA 129

Query: 192 ------MDVVEQGLSAV 202
                 +D+ + GL A+
Sbjct: 130 LHSLHKLDLYKNGLQAL 146


>gi|410939195|ref|ZP_11371030.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
 gi|410785700|gb|EKR74656.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
          Length = 410

 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 108/173 (62%), Gaps = 3/173 (1%)

Query: 22  QLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELI 81
           QL  +PN+IG L  L++L+++G+ L SLPK I   ++L+ L  N N+L  LP  IG +L 
Sbjct: 60  QLTSIPNAIGRLQNLRILELTGSQLTSLPKEIGRLQNLQGLFLNINRLSSLPQEIG-QLQ 118

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NLK L ++ N++  LP+ +  L +L+ LD   N   +LP+++  L NL+ L++S N    
Sbjct: 119 NLKRLFLSLNQLTSLPKEIGQLQNLQELDLSSNRFTTLPKEIGQLQNLQELDLSGN--QF 176

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            TLP  IG L +L +LD+S N+ TTLP  +G L+ L++L L GN   + P ++
Sbjct: 177 TTLPKEIGQLQNLQKLDLSNNRFTTLPKEVGQLQSLEELDLSGNQFTTLPKEI 229



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 119/210 (56%), Gaps = 8/210 (3%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP ++  RL N+ +L++  +QL  LP  IG L  L+ L ++ N L SLP+ I   ++L+ 
Sbjct: 64  IPNAI-GRLQNLRILELTGSQLTSLPKEIGRLQNLQGLFLNINRLSSLPQEIGQLQNLKR 122

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+L  LP  IG +L NL+ L ++ N+   LP+ +  L +L+ LD   N   +LP+
Sbjct: 123 LFLSLNQLTSLPKEIG-QLQNLQELDLSSNRFTTLPKEIGQLQNLQELDLSGNQFTTLPK 181

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L NL+ L++S N     TLP  +G L SL ELD+S N+ TTLP  I   + ++ L+
Sbjct: 182 EIGQLQNLQKLDLSNN--RFTTLPKEVGQLQSLEELDLSGNQFTTLPKEIRRRQNIRWLN 239

Query: 182 LEGNPLVSPPMDVVE----QGLSAVKGYLS 207
           L GN L S   ++ +    QGL   K   +
Sbjct: 240 LAGNQLTSLSKEIGQFQNLQGLDLSKNRFT 269



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 113/211 (53%), Gaps = 22/211 (10%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  L ++ N+L  LP  IG L  LK L +S N L SLPK I   ++L+EL+ + N
Sbjct: 92  GRLQNLQGLFLNINRLSSLPQEIGQLQNLKRLFLSLNQLTSLPKEIGQLQNLQELDLSSN 151

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP  IG +L NL+ L ++ N+   LP+ +  L +L+ LD   N   +LP+++  L 
Sbjct: 152 RFTTLPKEIG-QLQNLQELDLSGNQFTTLPKEIGQLQNLQKLDLSNNRFTTLPKEVGQLQ 210

Query: 128 NLEVLNIS--------------QNFQYLE-------TLPYSIGLLMSLVELDVSYNKITT 166
           +LE L++S              QN ++L        +L   IG   +L  LD+S N+ TT
Sbjct: 211 SLEELDLSGNQFTTLPKEIRRRQNIRWLNLAGNQLTSLSKEIGQFQNLQGLDLSKNRFTT 270

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQ 197
           LP  IG L+ L+ L+L GN   + P +V  Q
Sbjct: 271 LPKEIGQLQNLETLNLSGNRFTTFPKEVRRQ 301



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+ SN+   LP  IG L  L+ LD+SGN   +LPK I   ++L++L+ + N
Sbjct: 138 GQLQNLQELDLSSNRFTTLPKEIGQLQNLQELDLSGNQFTTLPKEIGQLQNLQKLDLSNN 197

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP  +G +L +L+ L ++ N+   LP+ +    ++R L+   N L SL +++    
Sbjct: 198 RFTTLPKEVG-QLQSLEELDLSGNQFTTLPKEIRRRQNIRWLNLAGNQLTSLSKEIGQFQ 256

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITT--------------------- 166
           NL+ L++S+N     TLP  IG L +L  L++S N+ TT                     
Sbjct: 257 NLQGLDLSKN--RFTTLPKEIGQLQNLETLNLSGNRFTTFPKEVRRQENITWLYLDDNQL 314

Query: 167 --LPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP  IG  + L+ L L+GN L S P ++
Sbjct: 315 KALPKEIGQFQHLEGLFLKGNQLTSLPKEI 344



 Score = 81.6 bits (200), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/149 (37%), Positives = 89/149 (59%), Gaps = 5/149 (3%)

Query: 48  SLPKTIENCRSLEELNANFNK--LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTS 105
           +L   ++N  ++ EL+  FN+  L  +P+ IG  L NL+ L +  +++  LP+ +  L +
Sbjct: 38  NLDDALDNPENVFELSFLFNREQLTSIPNAIG-RLQNLRILELTGSQLTSLPKEIGRLQN 96

Query: 106 LRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
           L+ L   +N L SLP+++  L NL+ L +S N   L +LP  IG L +L ELD+S N+ T
Sbjct: 97  LQGLFLNINRLSSLPQEIGQLQNLKRLFLSLN--QLTSLPKEIGQLQNLQELDLSSNRFT 154

Query: 166 TLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           TLP  IG L+ LQ+L L GN   + P ++
Sbjct: 155 TLPKEIGQLQNLQELDLSGNQFTTLPKEI 183



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 71/130 (54%), Gaps = 1/130 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +  N+  LD+  N+   LP  IG L  L+ L++SGN   + PK +    ++  L  + N
Sbjct: 253 GQFQNLQGLDLSKNRFTTLPKEIGQLQNLETLNLSGNRFTTFPKEVRRQENITWLYLDDN 312

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG +  +L+ L +  N++  LP+ +  L +L+ LD   N   + P+++E L 
Sbjct: 313 QLKALPKEIG-QFQHLEGLFLKGNQLTSLPKEIEQLQNLQQLDLSKNRFTTFPKEIEQLQ 371

Query: 128 NLEVLNISQN 137
           NL++L +  N
Sbjct: 372 NLKLLRLYSN 381


>gi|456823284|gb|EMF71754.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 455

 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 114/187 (60%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+H N+L  LP  IG L  L+ LD++ N L +LPK I   R+L+EL+ + N
Sbjct: 114 GQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRN 173

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NLKTL+    ++  LP+ +  L +L+ L+   N L +LP+++  L 
Sbjct: 174 QLTTLPKEIG-QLQNLKTLNSIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQ 232

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NLE+L + +N   +  LP  IG L +L  LD+  N++TTLP  IG L+ LQ+L L  N L
Sbjct: 233 NLEILVLREN--RITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQL 290

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 291 TTLPKEI 297



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/200 (40%), Positives = 112/200 (56%), Gaps = 3/200 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+H NQL  LP  IG L  L+ LD+  N L +LPK I   ++L+EL  + N
Sbjct: 252 GQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDEN 311

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L ++ N++  LP+ +  L SL+VL    N L +LP+++  L 
Sbjct: 312 QLTTLPKEIE-QLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQ 370

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+VL +  N   L TLP  IG L +L EL +  N++TT P  I  L+ LQ+L L  NPL
Sbjct: 371 NLQVLGLISN--QLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPL 428

Query: 188 VSPPMDVVEQGLSAVKGYLS 207
            S      E     VK  L 
Sbjct: 429 SSKEKKGFEDYFQNVKFILK 448



 Score =  107 bits (266), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 112/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+ +L +  N++  LP  IG L  L+ LD+  N L +LPK I   ++L+ L+ + N
Sbjct: 229 GELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQN 288

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L ++ N++  LP+ +  L +LRVLD   N L +LP+++  L 
Sbjct: 289 QLTTLPKEIG-QLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQ 347

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+VL +  N   L TLP  IG L +L  L +  N++TTLP  IG L+ LQ+L L+ N L
Sbjct: 348 SLQVLALGSN--RLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQL 405

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 406 TTFPKEI 412



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 109/186 (58%), Gaps = 3/186 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V  LD+   +L  LP  IG L  L+ L+++   L +LPK I   R+L+EL+ +FN L 
Sbjct: 48  LKVRTLDLRYQKLTILPKEIGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLT 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  +G +L NL+ L ++ N++  LP  +  L +L+ LD   N L +LP+++  L NL+
Sbjct: 108 TLPKEVG-QLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++ +N   L TLP  IG L +L  L+    ++TTLP  IG L+ L+ L+L  N L + 
Sbjct: 167 ELDLHRN--QLTTLPKEIGQLQNLKTLNSIVTQLTTLPKEIGELQNLKTLNLLDNQLTTL 224

Query: 191 PMDVVE 196
           P ++ E
Sbjct: 225 PKEIGE 230



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  N L  LP  +G L  L+ LD+  N L +LP  I   ++L+EL+ N N
Sbjct: 91  GQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSN 150

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  LP  I  +L NL+ L ++ N++  LP+ +  L +L+ L++ +  L +LP+++  L 
Sbjct: 151 KLTTLPKEIR-QLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNSIVTQLTTLPKEIGELQ 209

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+  N   L TLP  IG L +L  L +  N+IT LP  IG L+ LQ L L  N L
Sbjct: 210 NLKTLNLLDN--QLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQL 267

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 268 TTLPKEI 274



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/189 (38%), Positives = 113/189 (59%), Gaps = 7/189 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L+++S +L  LP  IG L  L+ LD+S N L +LPK +    +L+ L+ + N
Sbjct: 68  GQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +N NK+  LP+ +  L +L+ LD   N L +LP+++  L 
Sbjct: 128 RLATLPMEIG-QLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQ 186

Query: 128 NLEVLN--ISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ LN  ++Q    L TLP  IG L +L  L++  N++TTLP  IG L+ L+ L L  N
Sbjct: 187 NLKTLNSIVTQ----LTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLREN 242

Query: 186 PLVSPPMDV 194
            + + P ++
Sbjct: 243 RITALPKEI 251



 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/99 (43%), Positives = 61/99 (61%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R LD R   L  LP+++  L NL+ LN+  N Q L TLP  IG L +L 
Sbjct: 40  LAKALQNPLKVRTLDLRYQKLTILPKEIGQLENLQRLNL--NSQKLTTLPKEIGQLRNLQ 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           ELD+S+N +TTLP  +G L  LQ+L L  N L + PM++
Sbjct: 98  ELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEI 136


>gi|418686505|ref|ZP_13247671.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410738938|gb|EKQ83670.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 469

 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 115/187 (61%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL++++NQL  LP  IG L  L+VL+++ N L +LPK I   ++L+ L  N N
Sbjct: 66  GQLQNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLATLPKEIGQLKNLQVLELNNN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +N N++  LP+ +  L +L+ L+   N L +LPE++  L 
Sbjct: 126 QLATLPKEIG-QLKNLQVLELNNNQLATLPKEIGQLKNLQWLNLVTNQLTTLPEEIGQLQ 184

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           N + L +S+N   L TLP  IG L +L EL ++ N+ T  P  IG L+ LQ+L+L  N L
Sbjct: 185 NFQTLVLSKN--RLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQL 242

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 243 KTLPNEI 249



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/184 (40%), Positives = 112/184 (60%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VLD+   +LK LP  IG L  L+VL+++ N L +LPK I   ++L+ L  N N+L 
Sbjct: 46  LDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLA 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG +L NL+ L +N N++  LP+ +  L +L+VL+   N L +LP+++  L NL+
Sbjct: 106 TLPKEIG-QLKNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLATLPKEIGQLKNLQ 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+  N   L TLP  IG L +   L +S N++TTLP  IG L+ L++L L  N   + 
Sbjct: 165 WLNLVTN--QLTTLPEEIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAF 222

Query: 191 PMDV 194
           P ++
Sbjct: 223 PKEI 226



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 116/208 (55%), Gaps = 22/208 (10%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++++NQLK LPN IG L  L+ L +S N L++L   I   ++L+ L+ N N
Sbjct: 227 GQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDN 286

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG +L NL+ L +N N+   +P+ +  L +L+VLD   N  K++ E++  L 
Sbjct: 287 QLKTLPKEIG-QLKNLQVLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVSEEIGQLK 345

Query: 128 NLEVL---------------------NISQNFQYLETLPYSIGLLMSLVELDVSYNKITT 166
           NL++L                      +S N   L TLP  I  L +L EL +SYN++ T
Sbjct: 346 NLQMLFLNNNQLKTLSAEIGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLKT 405

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L   IG L+ L+KLSL  N L + P ++
Sbjct: 406 LSAEIGQLKNLKKLSLRDNQLTTLPKEI 433



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 113/193 (58%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L N   L +  N+L  LP  IG L  L+ L ++ N   + PK I   ++L++
Sbjct: 176 LPEEI-GQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQ 234

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N+L+ LP+ IG +L NL+ L ++ N++  L   +  L +L+VLD   N LK+LP+
Sbjct: 235 LNLYANQLKTLPNEIG-QLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPK 293

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L NL+VL+++ N    +T+P  IG L +L  LD+ YN+  T+ + IG L+ LQ L 
Sbjct: 294 EIGQLKNLQVLDLNNN--QFKTVPEEIGQLKNLQVLDLGYNQFKTVSEEIGQLKNLQMLF 351

Query: 182 LEGNPLVSPPMDV 194
           L  N L +   ++
Sbjct: 352 LNNNQLKTLSAEI 364



 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 60/99 (60%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVLD     LK+LP+++  L NL+VL ++ N   L TLP  IG L +L 
Sbjct: 38  LTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNN--QLATLPKEIGQLKNLQ 95

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L+++ N++ TLP  IG L+ LQ L L  N L + P ++
Sbjct: 96  VLELNNNQLATLPKEIGQLKNLQVLELNNNQLATLPKEI 134


>gi|418735798|ref|ZP_13292203.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
 gi|410748526|gb|EKR01425.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
          Length = 264

 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/183 (40%), Positives = 113/183 (61%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V +LD+ + +L  LP  IG L  L++L++  N L +LP  I   ++L ELN   N+L+ 
Sbjct: 43  DVRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEIGELQNLRELNLTKNQLKT 102

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ L +  N++  LP  +  L +L +LD R N LK++P+D+  L NL V
Sbjct: 103 LPKEIG-KLQNLRELRLAENQLKTLPNEIGELQNLTILDLRNNELKTIPKDIGKLKNLTV 161

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L++  N   L TLP  IG L +L +LD++YN++TTLP  IG L+KL  L L  N L + P
Sbjct: 162 LDLHIN--QLTTLPKEIGKLKNLTKLDLNYNELTTLPKEIGELQKLTILDLRNNELKTLP 219

Query: 192 MDV 194
            ++
Sbjct: 220 NEI 222



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 111/179 (62%), Gaps = 3/179 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+ +L+++ NQL  LPN IG L  L+ L+++ N L++LPK I   ++L EL    N
Sbjct: 62  GELQNLRILNLYRNQLTTLPNEIGELQNLRELNLTKNQLKTLPKEIGKLQNLRELRLAEN 121

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP+ IG EL NL  L +  N++  +P+ +  L +L VLD  +N L +LP+++  L 
Sbjct: 122 QLKTLPNEIG-ELQNLTILDLRNNELKTIPKDIGKLKNLTVLDLHINQLTTLPKEIGKLK 180

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           NL  L++  N+  L TLP  IG L  L  LD+  N++ TLP+ IG L++L+KL L+  P
Sbjct: 181 NLTKLDL--NYNELTTLPKEIGELQKLTILDLRNNELKTLPNEIGKLKELRKLYLDDIP 237



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/163 (39%), Positives = 98/163 (60%), Gaps = 3/163 (1%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           + +++LD+S   L +LPK I   ++L  LN   N+L  LP+ IG EL NL+ L++  N++
Sbjct: 42  TDVRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEIG-ELQNLRELNLTKNQL 100

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
             LP+ +  L +LR L    N LK+LP ++  L NL +L++  N   L+T+P  IG L +
Sbjct: 101 KTLPKEIGKLQNLRELRLAENQLKTLPNEIGELQNLTILDLRNN--ELKTIPKDIGKLKN 158

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           L  LD+  N++TTLP  IG L+ L KL L  N L + P ++ E
Sbjct: 159 LTVLDLHINQLTTLPKEIGKLKNLTKLDLNYNELTTLPKEIGE 201



 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 1/76 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L N+ VLD+H NQL  LP  IG L  L  LD++ N L +LPK I   + L  
Sbjct: 149 IPKDI-GKLKNLTVLDLHINQLTTLPKEIGKLKNLTKLDLNYNELTTLPKEIGELQKLTI 207

Query: 62  LNANFNKLRQLPDTIG 77
           L+   N+L+ LP+ IG
Sbjct: 208 LDLRNNELKTLPNEIG 223


>gi|398341355|ref|ZP_10526058.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
          Length = 401

 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/184 (40%), Positives = 113/184 (61%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VLD++  +LK LP  IG L  L+VL+++ N L +LPK I   ++L+EL+ + N+L 
Sbjct: 46  LDVRVLDLNEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLT 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
             P  IG +L NL+TL ++ N++  LP+ +  L +LR L    N   + P+++  L NL+
Sbjct: 106 TFPKEIG-QLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQ 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+  N   L+TLP  IG L +L EL +SYN++ TL   IG L+ LQ L L  N L + 
Sbjct: 165 QLNLYAN--QLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTL 222

Query: 191 PMDV 194
           P ++
Sbjct: 223 PKEI 226



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 110/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL++++NQL  LP  IG L  L+ L +SGN L + PK I   ++L+ L  + N
Sbjct: 66  GQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKEIGQLKNLQTLVLSKN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +N N+    P+ +  L +L+ L+   N LK+LP ++  L 
Sbjct: 126 RLTTLPKEIG-QLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQ 184

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L++S N   L+TL   IG L +L  LD++ N++ TLP  IG L+ LQ L L  N  
Sbjct: 185 NLRELHLSYN--QLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQF 242

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 243 KTVPEEI 249



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 114/187 (60%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  NQLK L   IG L  L+VLD++ N L++LPK I   ++L+ L+ N N
Sbjct: 181 GQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNN 240

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           + + +P+ IG +L NL+ L +  N+   +P+ +  L +L++L    N  K++PE+   L 
Sbjct: 241 QFKTVPEEIG-QLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEETGQLK 299

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L+++ N   L TLP  I  L +L EL +SYN++ TL   IG L+ L+KLSL  N L
Sbjct: 300 NLQMLSLNAN--QLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQL 357

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 358 KTLPKEI 364



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 101/165 (61%), Gaps = 3/165 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VLD++ NQLK LP  IG L  L++LD++ N  +++P+ I   ++L+ L+  +N
Sbjct: 204 GQLQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYN 263

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           + + +P+ IG +L NL+ L +N N+   +P+    L +L++L    N L +LP ++  L 
Sbjct: 264 QFKTVPEEIG-QLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQLK 322

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
           NL  L++S N   L+TL   IG L +L +L +  N++ TLP  IG
Sbjct: 323 NLRELHLSYN--QLKTLSAEIGQLKNLKKLSLRDNQLKTLPKEIG 365



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/99 (41%), Positives = 60/99 (60%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVLD     LK+LP+++  L NL+VL ++ N   L TLP  IG L +L 
Sbjct: 38  LTKALKNPLDVRVLDLNEQKLKTLPKEIGQLQNLQVLELNNN--QLATLPKEIGQLQNLQ 95

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           EL +S N++TT P  IG L+ LQ L L  N L + P ++
Sbjct: 96  ELHLSGNQLTTFPKEIGQLKNLQTLVLSKNRLTTLPKEI 134



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE  T +L N+ +L +++NQL  LPN I  L  L+ L +S N L++L   I   ++L++
Sbjct: 291 VPEE-TGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKK 349

Query: 62  LNANFNKLRQLPDTIG 77
           L+   N+L+ LP  IG
Sbjct: 350 LSLRDNQLKTLPKEIG 365


>gi|418752844|ref|ZP_13309101.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409966796|gb|EKO34636.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 539

 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 112/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+ SNQL  LP  IG L  L+ L+++ N   +LPK I N + L++L+   N
Sbjct: 132 GKLQNLRDLDLSSNQLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRN 191

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L  LK L ++ N+   LP+ +  L  L+ L    N   +LP++++ L 
Sbjct: 192 QLTTLPEEIG-KLQKLKELHLDGNQFTTLPKEIGKLQKLKELHLGSNRFTTLPKEIKKLQ 250

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+  N     TLP  IG L  L +L +++N++TTLP  IG L+ LQ+L+L GN L
Sbjct: 251 NLQWLNLDSN--RFTTLPKEIGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTLWGNQL 308

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 309 TTLPKEI 315



 Score =  103 bits (257), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 106/187 (56%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++  L +  NQL  LP  IG L  L+ L +  N L ++PK I   +SL+ L    N
Sbjct: 293 GKLQSLQRLTLWGNQLTTLPKEIGKLQSLQELILGKNQLTTIPKEIGKLQSLQSLTLWGN 352

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L +L+ L +  N++  +P+ +  L  L+ L    N L ++P+++E L 
Sbjct: 353 QLTTLPKEIG-KLQSLQELILGKNQLTTIPKEIWQLQYLQRLSLSFNQLTAIPKEIEKLQ 411

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++  N   L TLP  IG L  L ELD+ YN++T LP+ IG L+ L+ L L  N L
Sbjct: 412 NLQKLHLRNN--QLTTLPKEIGNLQKLQELDLGYNQLTALPEEIGKLQNLKDLYLNNNKL 469

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 470 TTLPKEI 476



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 110/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++  L +  NQL  +P  IG L  L+ L + GN L +LPK I   +SL+EL    N
Sbjct: 316 GKLQSLQELILGKNQLTTIPKEIGKLQSLQSLTLWGNQLTTLPKEIGKLQSLQELILGKN 375

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  I ++L  L+ LS++ N++  +P+ +  L +L+ L  R N L +LP+++ NL 
Sbjct: 376 QLTTIPKEI-WQLQYLQRLSLSFNQLTAIPKEIEKLQNLQKLHLRNNQLTTLPKEIGNLQ 434

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L++  N   L  LP  IG L +L +L ++ NK+TTLP  IG L+KL+ L L  N L
Sbjct: 435 KLQELDLGYN--QLTALPEEIGKLQNLKDLYLNNNKLTTLPKEIGKLQKLKDLYLNNNKL 492

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 493 TTLPKEI 499



 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 115/202 (56%), Gaps = 4/202 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L ++  L +  NQL  LP  IG L  L+ L +  N L ++PK I   + L+ 
Sbjct: 334 IPKEI-GKLQSLQSLTLWGNQLTTLPKEIGKLQSLQELILGKNQLTTIPKEIWQLQYLQR 392

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ +FN+L  +P  I  +L NL+ L +  N++  LP+ + +L  L+ LD   N L +LPE
Sbjct: 393 LSLSFNQLTAIPKEIE-KLQNLQKLHLRNNQLTTLPKEIGNLQKLQELDLGYNQLTALPE 451

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L NL+ L ++ N   L TLP  IG L  L +L ++ NK+TTLP  I  L+KL+ L 
Sbjct: 452 EIGKLQNLKDLYLNNN--KLTTLPKEIGKLQKLKDLYLNNNKLTTLPKEIEKLQKLKNLH 509

Query: 182 LEGNPLVSPPMDVVEQGLSAVK 203
           L  NP +    + +++ L  V+
Sbjct: 510 LADNPFLRSQKEKIQKLLPNVR 531



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 106/186 (56%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L++ SN+   LP  IG L KL+ L ++ N L +LPK I   +SL+ L    N+
Sbjct: 248 KLQNLQWLNLDSNRFTTLPKEIGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTLWGNQ 307

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG +L +L+ L +  N++  +P+ +  L SL+ L    N L +LP+++  L +
Sbjct: 308 LTTLPKEIG-KLQSLQELILGKNQLTTIPKEIGKLQSLQSLTLWGNQLTTLPKEIGKLQS 366

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L + +N   L T+P  I  L  L  L +S+N++T +P  I  L+ LQKL L  N L 
Sbjct: 367 LQELILGKN--QLTTIPKEIWQLQYLQRLSLSFNQLTAIPKEIEKLQNLQKLHLRNNQLT 424

Query: 189 SPPMDV 194
           + P ++
Sbjct: 425 TLPKEI 430



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 86/153 (56%), Gaps = 3/153 (1%)

Query: 42  SGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLT 101
           S + L +LPK I   ++L +L+ + N+L  LP  IG  L NL+ L++N N+   LP+ + 
Sbjct: 120 SNDPLWTLPKEIGKLQNLRDLDLSSNQLTTLPKEIG-NLQNLQDLNLNSNQFTTLPKEIW 178

Query: 102 HLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSY 161
           +L  L+ L    N L +LPE++  L  L+ L++  N     TLP  IG L  L EL +  
Sbjct: 179 NLQKLQKLSLGRNQLTTLPEEIGKLQKLKELHLDGN--QFTTLPKEIGKLQKLKELHLGS 236

Query: 162 NKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           N+ TTLP  I  L+ LQ L+L+ N   + P ++
Sbjct: 237 NRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEI 269


>gi|421118971|ref|ZP_15579298.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348311|gb|EKO99137.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 498

 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 114/187 (60%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+H N+L  LP  IG L  L+ LD++ N L +LPK I   R+L+EL+ + N
Sbjct: 160 GQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRN 219

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NLKTL++   ++  LP+ +  L +L+ L+   N L +LP+++  L 
Sbjct: 220 QLTTLPKEIG-QLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQ 278

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NLE+L + +N   +  LP  IG L +L  LD+  N++T LP  IG L+ LQ+L L  N L
Sbjct: 279 NLEILVLREN--RITALPKEIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQNQL 336

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 337 TTLPKEI 343



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/182 (41%), Positives = 108/182 (59%), Gaps = 3/182 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+H NQL  LP  IG L  L+ LD+  N L +LPK I   ++L+EL  + N
Sbjct: 298 GQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDEN 357

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L ++ N++  LP+ +  L SL+VL    N L +LP+++  L 
Sbjct: 358 QLTTLPKEIE-QLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQ 416

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+VL +  N   L TLP  IG L +L EL +  N++TT P  I  L+ LQ+L L  NPL
Sbjct: 417 NLQVLALISN--QLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPL 474

Query: 188 VS 189
            S
Sbjct: 475 SS 476



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/201 (37%), Positives = 118/201 (58%), Gaps = 4/201 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+ +L +  N++  LP  IG L  L+ LD+  N L  LPK I   ++L+ L+ + N
Sbjct: 275 GELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQN 334

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L ++ N++  LP+ +  L +LRVLD   N L +LP+++  L 
Sbjct: 335 QLTTLPKEIG-QLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQ 393

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+VL +  N   L TLP  IG L +L  L +  N++TTLP  IG L+ LQ+L L+ N L
Sbjct: 394 SLQVLALGSN--RLSTLPKEIGQLQNLQVLALISNQLTTLPKEIGQLQNLQELCLDENQL 451

Query: 188 VSPPMDVVE-QGLSAVKGYLS 207
            + P ++ + + L  +  YL+
Sbjct: 452 TTFPKEIRQLKNLQELHLYLN 472



 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 112/189 (59%), Gaps = 3/189 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  N L  LP  +G L  L+ L+++   L +LPK I   R+L+EL+ +FN
Sbjct: 91  GQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFN 150

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP  +G +L NL+ L ++ N++  LP  +  L +L+ LD   N L +LP+++  L 
Sbjct: 151 SLTTLPKEVG-QLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLR 209

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++ +N   L TLP  IG L +L  L++   ++TTLP  IG L+ L+ L+L  N L
Sbjct: 210 NLQELDLHRN--QLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQL 267

Query: 188 VSPPMDVVE 196
            + P ++ E
Sbjct: 268 TTLPKEIGE 276



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/189 (39%), Positives = 109/189 (57%), Gaps = 3/189 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  N L  LP  IG L  L+ LD+S N L +LPK +    +L+ LN N  
Sbjct: 68  GQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQ 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  LP  IG +L NL+ L ++ N +  LP+ +  L +L+ LD   N L +LP ++  L 
Sbjct: 128 KLTTLPKEIG-QLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLK 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L+++ N   L TLP  I  L +L ELD+  N++TTLP  IG L+ L+ L+L    L
Sbjct: 187 NLQELDLNSN--KLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQL 244

Query: 188 VSPPMDVVE 196
            + P ++ E
Sbjct: 245 TTLPKEIGE 253



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 48  SLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
            L KT++N   +  L+  + KL  LP  IG +L NL+ L ++ N + ILP+ +  L +L+
Sbjct: 39  DLAKTLQNPLKVRTLDLRYQKLTILPKEIG-QLQNLQRLDLSFNSLTILPKEIGQLRNLQ 97

Query: 108 VLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
            LD   N L +LP+++  L NL+ LN+  N Q L TLP  IG L +L ELD+S+N +TTL
Sbjct: 98  ELDLSFNSLTTLPKEVGQLENLQRLNL--NSQKLTTLPKEIGQLRNLQELDLSFNSLTTL 155

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P  +G L  LQ+L L  N L + PM++
Sbjct: 156 PKEVGQLENLQRLDLHQNRLATLPMEI 182


>gi|410451706|ref|ZP_11305708.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014472|gb|EKO76602.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 515

 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 116/187 (62%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+ SNQL  LP  IG L KL+ L+++ N L +LP+ I   ++L+EL+   N
Sbjct: 132 GKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQELDLEGN 191

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG  L NL+TL +  N++  LP+ +  L +L+ L    N L + P+++E+L 
Sbjct: 192 QLATLPEEIG-NLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTFPKEIEDLQ 250

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L++  N   L TLP  +G L +L E+  S N++TTLP  IG L+ LQ+L L  N L
Sbjct: 251 NLKILSLGNN--QLTTLPKEVGKLQNLQEMKSSKNQLTTLPKEIGNLQNLQELYLAHNQL 308

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 309 TALPKEI 315



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 112/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L +  NQL  LP  IG L  L+ L + GN L +LP  I N ++L+ L+   N
Sbjct: 293 GNLQNLQELYLAHNQLTALPKEIGNLQNLQQLYLYGNQLTTLPIEIGNLQNLQGLHLGNN 352

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL   P  IG  L  LK L +N N++  +P+ + +L +L+ L+   N L ++P+++ENL 
Sbjct: 353 KLTAFPKEIG-NLQKLKWLGLNKNQLTTIPKEIGNLQNLKELNLSSNQLTTIPKEIENLQ 411

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+VL+++ N   L  LP  IG L +L ELD++ N++TTLP  IG L+ L+ L L  NPL
Sbjct: 412 NLQVLDLNNN--QLTALPKEIGNLQNLKELDLTSNRLTTLPKEIGNLQSLESLDLSNNPL 469

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 470 TSFPEEI 476



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 75/195 (38%), Positives = 115/195 (58%), Gaps = 3/195 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L ++ NQL  LP  IG L  L+ L +  N L + PK I N + L+ L  N N
Sbjct: 316 GNLQNLQQLYLYGNQLTTLPIEIGNLQNLQGLHLGNNKLTAFPKEIGNLQKLKWLGLNKN 375

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  IG  L NLK L+++ N++  +P+ + +L +L+VLD   N L +LP+++ NL 
Sbjct: 376 QLTTIPKEIG-NLQNLKELNLSSNQLTTIPKEIENLQNLQVLDLNNNQLTALPKEIGNLQ 434

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L+++ N   L TLP  IG L SL  LD+S N +T+ P+ IG L+ L++L LE  P 
Sbjct: 435 NLKELDLTSN--RLTTLPKEIGNLQSLESLDLSNNPLTSFPEEIGKLQHLKRLRLENIPT 492

Query: 188 VSPPMDVVEQGLSAV 202
           + P  + + + L  V
Sbjct: 493 LLPQKEKIRKLLPNV 507



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 62/99 (62%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           LP+ +  L +LR LD   N L +LP+++  L  L+ LN+++N   L  LP  IG L +L 
Sbjct: 127 LPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRN--RLANLPEEIGKLQNLQ 184

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           ELD+  N++ TLP+ IG L+ LQ L LEGN L + P ++
Sbjct: 185 ELDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEI 223



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/97 (44%), Positives = 60/97 (61%), Gaps = 3/97 (3%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +   L N+ VLD+++NQL  LP  IG L  LK LD++ N L +LPK I N +SLE 
Sbjct: 403 IPKEI-ENLQNLQVLDLNNNQLTALPKEIGNLQNLKELDLTSNRLTTLPKEIGNLQSLES 461

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ 98
           L+ + N L   P+ IG +L +LK L +  N   +LPQ
Sbjct: 462 LDLSNNPLTSFPEEIG-KLQHLKRLRLE-NIPTLLPQ 496



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 65/110 (59%), Gaps = 5/110 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +   L N+  L++ SNQL  +P  I  L  L+VLD++ N L +LPK I N ++L+E
Sbjct: 380 IPKEI-GNLQNLKELNLSSNQLTTIPKEIENLQNLQVLDLNNNQLTALPKEIGNLQNLKE 438

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQS---LTHLTSLRV 108
           L+   N+L  LP  IG  L +L++L ++ N +   P+    L HL  LR+
Sbjct: 439 LDLTSNRLTTLPKEIG-NLQSLESLDLSNNPLTSFPEEIGKLQHLKRLRL 487



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/54 (50%), Positives = 37/54 (68%)

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L TLP  IG L +L +LD+S N++ TLP  IG L+KLQKL+L  N L + P ++
Sbjct: 124 LWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEI 177


>gi|417763987|ref|ZP_12411960.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400353819|gb|EJP05972.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 452

 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 114/187 (60%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+H N+L  LP  IG L  L+ LD++ N L +LPK I   R+L+EL+ + N
Sbjct: 114 GQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRN 173

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NLKTL++   ++  LP+ +  L +L+ L+   N L +LP+++  L 
Sbjct: 174 QLTTLPKEIG-QLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQ 232

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NLE+L + +N   +  LP  IG L +L  LD+  N++T LP  IG L+ LQ+L L  N L
Sbjct: 233 NLEILVLREN--RITALPKEIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQNQL 290

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 291 TTLPKEI 297



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/182 (41%), Positives = 108/182 (59%), Gaps = 3/182 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+H NQL  LP  IG L  L+ LD+  N L +LPK I   ++L+EL  + N
Sbjct: 252 GQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDEN 311

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L ++ N++  LP+ +  L SL+VL    N L +LP+++  L 
Sbjct: 312 QLTTLPKEIE-QLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQ 370

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+VL +  N   L TLP  IG L +L EL +  N++TT P  I  L+ LQ+L L  NPL
Sbjct: 371 NLQVLALISN--QLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPL 428

Query: 188 VS 189
            S
Sbjct: 429 SS 430



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 73/186 (39%), Positives = 110/186 (59%), Gaps = 3/186 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V  LD+   +L  LP  IG L  L+ LD+S N L  LPK I   R+L+EL+ +FN L 
Sbjct: 48  LKVRTLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLT 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  +G +L NL+ L ++ N++  LP  +  L +L+ LD   N L +LP+++  L NL+
Sbjct: 108 TLPKEVG-QLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++ +N   L TLP  IG L +L  L++   ++TTLP  IG L+ L+ L+L  N L + 
Sbjct: 167 ELDLHRN--QLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTL 224

Query: 191 PMDVVE 196
           P ++ E
Sbjct: 225 PKEIGE 230



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/201 (37%), Positives = 118/201 (58%), Gaps = 4/201 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+ +L +  N++  LP  IG L  L+ LD+  N L  LPK I   ++L+ L+ + N
Sbjct: 229 GELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQN 288

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L ++ N++  LP+ +  L +LRVLD   N L +LP+++  L 
Sbjct: 289 QLTTLPKEIG-QLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQ 347

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+VL +  N   L TLP  IG L +L  L +  N++TTLP  IG L+ LQ+L L+ N L
Sbjct: 348 SLQVLALGSN--RLSTLPKEIGQLQNLQVLALISNQLTTLPKEIGQLQNLQELCLDENQL 405

Query: 188 VSPPMDVVE-QGLSAVKGYLS 207
            + P ++ + + L  +  YL+
Sbjct: 406 TTFPKEIRQLKNLQELHLYLN 426



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  N L  LP  IG L  L+ LD+S N L +LPK +    +L+ L+ + N
Sbjct: 68  GQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +N NK+  LP+ +  L +L+ LD   N L +LP+++  L 
Sbjct: 128 RLATLPMEIG-QLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQ 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+      L TLP  IG L +L  L++  N++TTLP  IG L+ L+ L L  N +
Sbjct: 187 NLKTLNLI--VTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRI 244

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 245 TALPKEI 251



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 106/187 (56%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  N L  LP  +G L  L+ LD+  N L +LP  I   ++L+EL+ N N
Sbjct: 91  GQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSN 150

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  LP  I  +L NL+ L ++ N++  LP+ +  L +L+ L+  +  L +LP+++  L 
Sbjct: 151 KLTTLPKEIR-QLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQ 209

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+  N   L TLP  IG L +L  L +  N+IT LP  IG L+ LQ L L  N L
Sbjct: 210 NLKTLNLLDN--QLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQL 267

Query: 188 VSPPMDV 194
              P ++
Sbjct: 268 TILPKEI 274



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 41/99 (41%), Positives = 60/99 (60%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R LD R   L  LP+++  L NL+ L++S  F  L  LP  IG L +L 
Sbjct: 40  LAKTLQNPLKVRTLDLRYQKLTILPKEIGQLQNLQRLDLS--FNSLTILPKEIGQLRNLQ 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           ELD+S+N +TTLP  +G L  LQ+L L  N L + PM++
Sbjct: 98  ELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEI 136


>gi|332710873|ref|ZP_08430810.1| Leucine Rich Repeat, Miro-like protein [Moorea producens 3L]
 gi|332350426|gb|EGJ30029.1| Leucine Rich Repeat, Miro-like protein [Moorea producens 3L]
          Length = 868

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/207 (37%), Positives = 132/207 (63%), Gaps = 4/207 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+  +L N+  LD+  N+L  +P SIG L+ L  LD+SGN L ++P+++     L +
Sbjct: 61  VPESI-GKLTNLTQLDLSINKLTTVPESIGKLTNLTQLDLSGNELTTVPESLTKLTQLTQ 119

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L  +P+++  +L NL  L ++ N++  +P+SLT LT+L  L    N L ++PE
Sbjct: 120 LDLSVNELTTVPESLT-KLTNLTQLDLSFNELTTVPESLTKLTNLTELYLSDNQLTTVPE 178

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L  L NL +L++S N   L T+P S+  L +L EL +S N++TT+P+S+  L  L +L 
Sbjct: 179 SLTKLTNLTLLDLSDN--QLTTVPESLTKLTNLTELYLSDNQLTTVPESLTKLTNLTELD 236

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSE 208
           L  NPL +PP+++V+ G+ A++ Y  +
Sbjct: 237 LMVNPLETPPIEIVKNGIEAIRDYFRQ 263



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 76/125 (60%), Gaps = 3/125 (2%)

Query: 67  NKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENL 126
           ++L ++P  + F L  L+ L ++ NK+  +P+S+  LT+L  LD  +N L ++PE +  L
Sbjct: 33  DQLTEIPIEV-FNLSQLEELDLSDNKLTTVPESIGKLTNLTQLDLSINKLTTVPESIGKL 91

Query: 127 INLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
            NL  L++S N   L T+P S+  L  L +LD+S N++TT+P+S+  L  L +L L  N 
Sbjct: 92  TNLTQLDLSGN--ELTTVPESLTKLTQLTQLDLSVNELTTVPESLTKLTNLTQLDLSFNE 149

Query: 187 LVSPP 191
           L + P
Sbjct: 150 LTTVP 154



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 32/54 (59%)

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L  +P  +  L  L ELD+S NK+TT+P+SIG L  L +L L  N L + P  +
Sbjct: 35  LTEIPIEVFNLSQLEELDLSDNKLTTVPESIGKLTNLTQLDLSINKLTTVPESI 88


>gi|301099287|ref|XP_002898735.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262104808|gb|EEY62860.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 853

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 77/219 (35%), Positives = 125/219 (57%), Gaps = 4/219 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+   L  ++ LD+  N+L+ LP+++  L+ LK+L++S N+LE LP+       LE+
Sbjct: 117 LPESI-GTLRYLMELDLTKNRLRELPDTLTKLTALKILNLSCNVLEKLPEEFGKLEKLEK 175

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           +    NKL QLP +IG    + +  + NCNK+  LP+S+  LT+L  L   +N L  LP+
Sbjct: 176 IWLENNKLTQLPASIG-GCRSARCANFNCNKLSELPESIGALTALTALSVNMNELIELPD 234

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L NL+ L+ S+N   L  LP  IG + +L EL + +N I  LP S   L  LQ L 
Sbjct: 235 TIVALPNLQSLHASRN--QLIKLPRCIGDMQALRELRLDWNSIQELPFSFRALTNLQFLC 292

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKK 220
           +E N L  P +DV+ +G+     Y+ + +    +S +++
Sbjct: 293 MEQNLLRLPTIDVIARGVPETLSYMDKALVEFQRSSRRE 331



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 2/138 (1%)

Query: 57  RSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
           R L  L    + L +LP+ +   L +L+TLS   + +  LP+S+  L  L  LD   N L
Sbjct: 78  RDLLALRITGHDLGELPEALPLALPSLETLSFIDDGLEKLPESIGTLRYLMELDLTKNRL 137

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + LP+ L  L  L++LN+S N   LE LP   G L  L ++ +  NK+T LP SIG  R 
Sbjct: 138 RELPDTLTKLTALKILNLSCNV--LEKLPEEFGKLEKLEKIWLENNKLTQLPASIGGCRS 195

Query: 177 LQKLSLEGNPLVSPPMDV 194
            +  +   N L   P  +
Sbjct: 196 ARCANFNCNKLSELPESI 213


>gi|421088203|ref|ZP_15549031.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410003188|gb|EKO53634.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 401

 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/184 (40%), Positives = 112/184 (60%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VLD+   +LK LP  IG L  L+VL+++ N L +LPK I   ++L+EL+ + N+L 
Sbjct: 46  LDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLT 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
             P  IG +L NL+TL ++ N++  LP+ +  L +LR L    N   + P+++  L NL+
Sbjct: 106 TFPKEIG-QLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQ 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+  N   L+TLP  IG L +L EL +SYN++ TL   IG L+ LQ L L  N L + 
Sbjct: 165 QLNLYAN--QLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTL 222

Query: 191 PMDV 194
           P ++
Sbjct: 223 PKEI 226



 Score =  110 bits (276), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 110/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL++++NQL  LP  IG L  L+ L +SGN L + PK I   ++L+ L  + N
Sbjct: 66  GQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKEIGQLKNLQTLVLSKN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +N N+    P+ +  L +L+ L+   N LK+LP ++  L 
Sbjct: 126 RLTTLPKEIG-QLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQ 184

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L++S N   L+TL   IG L +L  LD++ N++ TLP  IG L+ LQ L L  N  
Sbjct: 185 NLRELHLSYN--QLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQF 242

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 243 KTVPEEI 249



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 114/187 (60%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  NQLK L   IG L  L+VLD++ N L++LPK I   ++L+ L+ N N
Sbjct: 181 GQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNN 240

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           + + +P+ IG +L NL+ L +  N+   +P+ +  L +L++L    N  K++PE+   L 
Sbjct: 241 QFKTVPEEIG-QLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEETGQLK 299

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L+++ N   L TLP  I  L +L EL +SYN++ TL   IG L+ L+KLSL  N L
Sbjct: 300 NLQMLSLNAN--QLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQL 357

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 358 KTLPKEI 364



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 101/165 (61%), Gaps = 3/165 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VLD++ NQLK LP  IG L  L++LD++ N  +++P+ I   ++L+ L+  +N
Sbjct: 204 GQLQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYN 263

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           + + +P+ IG +L NL+ L +N N+   +P+    L +L++L    N L +LP ++  L 
Sbjct: 264 QFKTVPEEIG-QLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQLK 322

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
           NL  L++S N   L+TL   IG L +L +L +  N++ TLP  IG
Sbjct: 323 NLRELHLSYN--QLKTLSAEIGQLKNLKKLSLRDNQLKTLPKEIG 365



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/99 (41%), Positives = 60/99 (60%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVLD     LK+LP+++  L NL+VL ++ N   L TLP  IG L +L 
Sbjct: 38  LTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNN--QLATLPKEIGQLQNLQ 95

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           EL +S N++TT P  IG L+ LQ L L  N L + P ++
Sbjct: 96  ELHLSGNQLTTFPKEIGQLKNLQTLVLSKNRLTTLPKEI 134



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE  T +L N+ +L +++NQL  LPN I  L  L+ L +S N L++L   I   ++L++
Sbjct: 291 VPEE-TGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKK 349

Query: 62  LNANFNKLRQLPDTIG 77
           L+   N+L+ LP  IG
Sbjct: 350 LSLRDNQLKTLPKEIG 365


>gi|456972990|gb|EMG13268.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 379

 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 128/220 (58%), Gaps = 8/220 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++++NQL  LP  IG L  L+ L++  N L +L K I   ++L+EL  N+N
Sbjct: 160 GQLKNLQALELNNNQLMTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQLKNLQELYLNYN 219

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+ L +N N++  L + +  L +L+ LD   N  K +P ++E L 
Sbjct: 220 QLTILPNEIG-QLKNLQALELNNNQLKTLSKEIGQLKNLKRLDLGYNQFKIIPNEIEQLQ 278

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+VL ++ N   L TL   IG L +L EL +SYN+ TTLP+ IG L+ LQ L L  N L
Sbjct: 279 NLQVLELNNN--QLTTLSKEIGRLQNLQELYLSYNQFTTLPEEIGQLKNLQVLELNNNQL 336

Query: 188 VSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
            +   ++       +K     +++N+  S ++K  + KL+
Sbjct: 337 KTLSKEI-----GQLKNLKRLELDNNQLSSEEKERIRKLL 371



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  N L   P  IG L  L+VL+++ N L++ PK I   ++L  L  N N
Sbjct: 68  GQLKNLHDLNLDENPLGAFPKEIGQLENLRVLELNNNQLKTFPKEIGQLKNLLALYLNNN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  L   IG +L NL+ L +N N++ ILP  +  L +L+ L+   N L +LPE++  L 
Sbjct: 128 QLMTLSKGIG-QLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLMTLPEEIGQLK 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+  N   L TL   IG L +L EL ++YN++T LP+ IG L+ LQ L L  N L
Sbjct: 187 NLQTLNLWNN--QLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQL 244

Query: 188 VSPPMDV 194
            +   ++
Sbjct: 245 KTLSKEI 251



 Score = 37.4 bits (85), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 71/169 (42%), Gaps = 49/169 (28%)

Query: 75  TIGF-ELINL----KTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           TIGF  LINL    +T  +       L +++ +   +R L      L +LP+++  L NL
Sbjct: 14  TIGFLFLINLFCKIQTEKVEPKTYRDLTEAIQNPLDVRFLYLNGQKLTTLPKEIGQLKNL 73

Query: 130 EVLNIS--------------QNFQYLE------------------------------TLP 145
             LN+               +N + LE                              TL 
Sbjct: 74  HDLNLDENPLGAFPKEIGQLENLRVLELNNNQLKTFPKEIGQLKNLLALYLNNNQLMTLS 133

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             IG L +L EL ++YN++T LP+ IG L+ LQ L L  N L++ P ++
Sbjct: 134 KGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLMTLPEEI 182


>gi|421099992|ref|ZP_15560634.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796973|gb|EKR99090.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 474

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/180 (44%), Positives = 112/180 (62%), Gaps = 3/180 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL +++NQL  LP  IG L  L+VL +  N L +LPK I + + L+EL  + N
Sbjct: 298 GQLQNLRVLYLYNNQLTILPKEIGKLQNLQVLYLHSNQLTTLPKEIGHLKGLQELYLSNN 357

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG EL NL+ L ++ N++  LP+ +  L +L VL    N L SLP+D+  L 
Sbjct: 358 QLTTLPKEIG-ELQNLQVLYLHSNQLTTLPKEIGQLQNLPVLYLSYNQLTSLPKDIGKLQ 416

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++S N   L TLP  IG L +L EL +S NK+ TLPD IG L+KL+ L L+  PL
Sbjct: 417 NLQKLDLSNN--QLTTLPNEIGKLQNLQELYLSNNKLKTLPDEIGKLQKLRTLDLDDIPL 474



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/187 (41%), Positives = 111/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VLD+ +NQL  LP  IG L +L+ LD+S N L +LPK I   ++L+ L+ + N
Sbjct: 206 GKLQNLQVLDLTNNQLTTLPKDIGHLKELQDLDLSHNKLTALPKDIGKLQNLQVLDLSGN 265

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG+ L  L+ L +  N+   LP+ +  L +LRVL    N L  LP+++  L 
Sbjct: 266 QLTTLPKDIGY-LKELQVLHLEDNQFTTLPKEIGQLQNLRVLYLYNNQLTILPKEIGKLQ 324

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+VL +  N   L TLP  IG L  L EL +S N++TTLP  IG L+ LQ L L  N L
Sbjct: 325 NLQVLYLHSN--QLTTLPKEIGHLKGLQELYLSNNQLTTLPKEIGELQNLQVLYLHSNQL 382

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 383 TTLPKEI 389



 Score =  111 bits (277), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 85/241 (35%), Positives = 120/241 (49%), Gaps = 54/241 (22%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V++LD+  NQL  LP  IG L KL+ LD+ GN + +LPK I   + L++L+ + N+L+ 
Sbjct: 49  DVLILDLIGNQLTTLPKDIGKLQKLQKLDLRGNRIATLPKEIGYLKELQKLDLSNNQLKT 108

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  I  +L     L +N N    LP+ +  L  L+ L+   N LK+LP+D+E L NL+V
Sbjct: 109 LPKDIE-QLQKPLVLHLNYNNFTTLPKEIGKLKELQGLELYNNQLKTLPKDIERLQNLQV 167

Query: 132 LNIS-------------------------------------QNFQYLE-------TLPYS 147
           LN++                                     QN Q L+       TLP  
Sbjct: 168 LNLTNNQLKTLPKDIGKLQNLQVLRLGNNKLTILSKEIGKLQNLQVLDLTNNQLTTLPKD 227

Query: 148 IGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLS 207
           IG L  L +LD+S+NK+T LP  IG L+ LQ L L GN L + P D+         GYL 
Sbjct: 228 IGHLKELQDLDLSHNKLTALPKDIGKLQNLQVLDLSGNQLTTLPKDI---------GYLK 278

Query: 208 E 208
           E
Sbjct: 279 E 279



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 130/228 (57%), Gaps = 13/228 (5%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VLD+  NQL  LP  IG L +L+VL +  N   +LPK I   ++L  L    N
Sbjct: 252 GKLQNLQVLDLSGNQLTTLPKDIGYLKELQVLHLEDNQFTTLPKEIGQLQNLRVLYLYNN 311

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L ++ N++  LP+ + HL  L+ L    N L +LP+++  L 
Sbjct: 312 QLTILPKEIG-KLQNLQVLYLHSNQLTTLPKEIGHLKGLQELYLSNNQLTTLPKEIGELQ 370

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+VL +  N   L TLP  IG L +L  L +SYN++T+LP  IG L+ LQKL L  N L
Sbjct: 371 NLQVLYLHSN--QLTTLPKEIGQLQNLPVLYLSYNQLTSLPKDIGKLQNLQKLDLSNNQL 428

Query: 188 VSPPMDVVE-QGLSAVKGYLSEKMNNDHKS-PKKKSWVGKLVKYGTFN 233
            + P ++ + Q L  +  YLS   NN  K+ P +   +GKL K  T +
Sbjct: 429 TTLPNEIGKLQNLQEL--YLS---NNKLKTLPDE---IGKLQKLRTLD 468



 Score =  107 bits (266), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 112/189 (59%), Gaps = 3/189 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL + +N+L  L   IG L  L+VLD++ N L +LPK I + + L++L+ + N
Sbjct: 183 GKLQNLQVLRLGNNKLTILSKEIGKLQNLQVLDLTNNQLTTLPKDIGHLKELQDLDLSHN 242

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  LP  IG +L NL+ L ++ N++  LP+ + +L  L+VL    N   +LP+++  L 
Sbjct: 243 KLTALPKDIG-KLQNLQVLDLSGNQLTTLPKDIGYLKELQVLHLEDNQFTTLPKEIGQLQ 301

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL VL +  N   L  LP  IG L +L  L +  N++TTLP  IG L+ LQ+L L  N L
Sbjct: 302 NLRVLYLYNN--QLTILPKEIGKLQNLQVLYLHSNQLTTLPKEIGHLKGLQELYLSNNQL 359

Query: 188 VSPPMDVVE 196
            + P ++ E
Sbjct: 360 TTLPKEIGE 368


>gi|220907470|ref|YP_002482781.1| hypothetical protein Cyan7425_2057 [Cyanothece sp. PCC 7425]
 gi|219864081|gb|ACL44420.1| leucine-rich repeat protein [Cyanothece sp. PCC 7425]
          Length = 482

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/193 (41%), Positives = 117/193 (60%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+   L+N+  L + +NQL  LP +IG L +L+ L+++ NLL  LPKTI +   L+E
Sbjct: 24  LPESI-CLLINLQELSLENNQLTELPEAIGSLIQLQELNLASNLLIKLPKTISSLTQLKE 82

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N+L  +PD IGF L  L+ L ++ N++  LP+ +  LT L+ L    N L  LPE
Sbjct: 83  LNLRENQLADVPDEIGF-LTQLQELWLSSNQLTHLPEMIGSLTQLQELFLYSNQLTDLPE 141

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L NL  L  L++  N  +L  LP +IG L  L ELD+  N++T+LP+S+G L +L+KL 
Sbjct: 142 SLANLTRLNWLSLETN--HLTVLPETIGSLTLLNELDLKENQLTSLPESVGSLIRLKKLD 199

Query: 182 LEGNPLVSPPMDV 194
           L  N L   P  +
Sbjct: 200 LADNQLTHLPESI 212



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/208 (37%), Positives = 115/208 (55%), Gaps = 4/208 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+   L  +  LD+  NQLK LP SIG L++L  L +S N L  LP  I +   LE 
Sbjct: 277 LPESI-GSLTQLYWLDLSGNQLKHLPESIGSLTQLLGLSLSNNQLTELPTAICSLTDLES 335

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+L ++P++I  +L  L+ L+++ N++  LP ++  LT L       N L  LPE
Sbjct: 336 LRLSDNQLTEIPESIS-DLTELEWLNLSRNQLTELPAAIGLLTELETFYLSENQLTELPE 394

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  LI L+ + +  N   L  LP S   L+ L  L +  N++T LP +IG L +L+++ 
Sbjct: 395 SIGALIQLDWIFLDDN--QLIKLPESFSSLIQLRRLYLENNQLTELPVAIGSLVQLEEIK 452

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEK 209
           L GNPL S    V  QG SAV  YL  K
Sbjct: 453 LNGNPLNSDLATVYAQGTSAVLAYLRAK 480



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/193 (39%), Positives = 111/193 (57%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+   L+ +  LD+  NQL  LP SIG LS+L  L +  N L SLPK+I + + L+E
Sbjct: 185 LPESV-GSLIRLKKLDLADNQLTHLPESIGSLSRLNELCLCNNQLNSLPKSIGHLKQLKE 243

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+L  LP +IG  L  L+ + ++ N++  LP+S+  LT L  LD   N LK LPE
Sbjct: 244 LCVCNNQLSNLPGSIG-SLRRLRKIDLSDNQLTYLPESIGSLTQLYWLDLSGNQLKHLPE 302

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + +L  L  L++S N   L  LP +I  L  L  L +S N++T +P+SI  L +L+ L+
Sbjct: 303 SIGSLTQLLGLSLSNN--QLTELPTAICSLTDLESLRLSDNQLTEIPESISDLTELEWLN 360

Query: 182 LEGNPLVSPPMDV 194
           L  N L   P  +
Sbjct: 361 LSRNQLTELPAAI 373



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/195 (39%), Positives = 109/195 (55%), Gaps = 6/195 (3%)

Query: 1   MIPESLTA-RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           ++PE++ +  LLN   LD+  NQL  LP S+G L +LK LD++ N L  LP++I +   L
Sbjct: 161 VLPETIGSLTLLNE--LDLKENQLTSLPESVGSLIRLKKLDLADNQLTHLPESIGSLSRL 218

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL    N+L  LP +IG  L  LK L +  N++  LP S+  L  LR +D   N L  L
Sbjct: 219 NELCLCNNQLNSLPKSIGH-LKQLKELCVCNNQLSNLPGSIGSLRRLRKIDLSDNQLTYL 277

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE + +L  L  L++S N   L+ LP SIG L  L+ L +S N++T LP +I  L  L+ 
Sbjct: 278 PESIGSLTQLYWLDLSGN--QLKHLPESIGSLTQLLGLSLSNNQLTELPTAICSLTDLES 335

Query: 180 LSLEGNPLVSPPMDV 194
           L L  N L   P  +
Sbjct: 336 LRLSDNQLTEIPESI 350



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 109/193 (56%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PESL A L  +  L + +N L  LP +IG L+ L  LD+  N L SLP+++ +   L++
Sbjct: 139 LPESL-ANLTRLNWLSLETNHLTVLPETIGSLTLLNELDLKENQLTSLPESVGSLIRLKK 197

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+L  LP++IG  L  L  L +  N++  LP+S+ HL  L+ L    N L +LP 
Sbjct: 198 LDLADNQLTHLPESIG-SLSRLNELCLCNNQLNSLPKSIGHLKQLKELCVCNNQLSNLPG 256

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + +L  L  +++S N   L  LP SIG L  L  LD+S N++  LP+SIG L +L  LS
Sbjct: 257 SIGSLRRLRKIDLSDN--QLTYLPESIGSLTQLYWLDLSGNQLKHLPESIGSLTQLLGLS 314

Query: 182 LEGNPLVSPPMDV 194
           L  N L   P  +
Sbjct: 315 LSNNQLTELPTAI 327



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/169 (39%), Positives = 102/169 (60%), Gaps = 3/169 (1%)

Query: 26  LPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKT 85
           +P SIG L++L+ L VS N L  LP++I    +L+EL+   N+L +LP+ IG  LI L+ 
Sbjct: 1   MPESIGSLTQLQKLGVSHNQLTQLPESICLLINLQELSLENNQLTELPEAIG-SLIQLQE 59

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L++  N ++ LP++++ LT L+ L+ R N L  +P+++  L  L+ L +S N   L  LP
Sbjct: 60  LNLASNLLIKLPKTISSLTQLKELNLRENQLADVPDEIGFLTQLQELWLSSN--QLTHLP 117

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             IG L  L EL +  N++T LP+S+  L +L  LSLE N L   P  +
Sbjct: 118 EMIGSLTQLQELFLYSNQLTDLPESLANLTRLNWLSLETNHLTVLPETI 166


>gi|418707285|ref|ZP_13268113.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|421128256|ref|ZP_15588473.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421133246|ref|ZP_15593395.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410022575|gb|EKO89351.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410434268|gb|EKP83407.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410772424|gb|EKR47610.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 374

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 128/220 (58%), Gaps = 8/220 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++++NQL  LP  IG L  L+ L++  N L +L K I   ++L+EL  N+N
Sbjct: 155 GQLKNLQALELNNNQLMTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQLKNLQELYLNYN 214

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+ L +N N++  L + +  L +L+ LD   N  K +P ++E L 
Sbjct: 215 QLTILPNEIG-QLKNLQALELNNNQLKTLSKEIGQLKNLKRLDLGYNQFKIIPNEIEQLQ 273

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+VL ++ N   L TL   IG L +L EL +SYN+ TTLP+ IG L+ LQ L L  N L
Sbjct: 274 NLQVLELNNN--QLTTLSKEIGRLQNLQELYLSYNQFTTLPEEIGQLKNLQVLELNNNQL 331

Query: 188 VSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
            +   ++       +K     +++N+  S ++K  + KL+
Sbjct: 332 KTLSKEI-----GQLKNLKRLELDNNQLSSEEKERIRKLL 366



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  N L   P  IG L  L+VL+++ N L++ PK I   ++L  L  N N
Sbjct: 63  GQLKNLHDLNLDENPLGAFPKEIGQLENLRVLELNNNQLKTFPKEIGQLKNLLALYLNNN 122

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  L   IG +L NL+ L +N N++ ILP  +  L +L+ L+   N L +LPE++  L 
Sbjct: 123 QLMTLSKGIG-QLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLMTLPEEIGQLK 181

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+  N   L TL   IG L +L EL ++YN++T LP+ IG L+ LQ L L  N L
Sbjct: 182 NLQTLNLWNN--QLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQL 239

Query: 188 VSPPMDV 194
            +   ++
Sbjct: 240 KTLSKEI 246



 Score = 37.4 bits (85), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 71/169 (42%), Gaps = 49/169 (28%)

Query: 75  TIGF-ELINL----KTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           TIGF  LINL    +T  +       L +++ +   +R L      L +LP+++  L NL
Sbjct: 9   TIGFLFLINLFCKIQTEKVEPKTYRDLTEAIQNPLDVRFLYLNGQKLTTLPKEIGQLKNL 68

Query: 130 EVLNIS--------------QNFQYLE------------------------------TLP 145
             LN+               +N + LE                              TL 
Sbjct: 69  HDLNLDENPLGAFPKEIGQLENLRVLELNNNQLKTFPKEIGQLKNLLALYLNNNQLMTLS 128

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             IG L +L EL ++YN++T LP+ IG L+ LQ L L  N L++ P ++
Sbjct: 129 KGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLMTLPEEI 177


>gi|418688970|ref|ZP_13250097.1| leucine rich repeat protein, partial [Leptospira interrogans str.
           FPW2026]
 gi|400361861|gb|EJP17822.1| leucine rich repeat protein, partial [Leptospira interrogans str.
           FPW2026]
          Length = 336

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 128/220 (58%), Gaps = 8/220 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++++NQL  LP  IG L  L+ L++  N L +L K I   ++L+EL  N+N
Sbjct: 117 GQLKNLQALELNNNQLMTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQLKNLQELYLNYN 176

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+ L +N N++  L + +  L +L+ LD   N  K +P ++E L 
Sbjct: 177 QLTILPNEIG-QLKNLQALELNNNQLKTLSKEIGQLKNLKRLDLGYNQFKIIPNEIEQLQ 235

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+VL ++ N   L TL   IG L +L EL +SYN++T LP+ IG L+ LQ L L  N L
Sbjct: 236 NLQVLELNNN--QLTTLSKEIGRLQNLQELYLSYNQLTILPNEIGQLKNLQVLELNNNQL 293

Query: 188 VSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
            +   ++       +K     ++NN+  S ++K  + KL+
Sbjct: 294 KTLSKEI-----GQLKNLKRLELNNNQLSSEEKERIRKLL 328



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  N L   P  IG L  L+VL+++ N L++ PK I   ++L  L  N N
Sbjct: 25  GQLKNLHDLNLDENPLGAFPKEIGQLENLRVLELNNNQLKTFPKEIGQLKNLLALYLNNN 84

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  L   IG +L NL+ L +N N++ ILP  +  L +L+ L+   N L +LPE++  L 
Sbjct: 85  QLMTLSKGIG-QLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLMTLPEEIGQLK 143

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+  N   L TL   IG L +L EL ++YN++T LP+ IG L+ LQ L L  N L
Sbjct: 144 NLQTLNLWNN--QLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQL 201

Query: 188 VSPPMDV 194
            +   ++
Sbjct: 202 KTLSKEI 208


>gi|421099998|ref|ZP_15560640.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796979|gb|EKR99096.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 310

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/193 (40%), Positives = 112/193 (58%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +   L  + VL ++ NQLK LP  IG L  L+VL +S N L SLPK I   + L+ 
Sbjct: 80  LPEDI-GYLKELQVLHLYDNQLKTLPKEIGQLQNLRVLGLSHNKLTSLPKDIGQLQKLQR 138

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+LR LP  IG +L  L+ L +  N++ +LP+ +  L  L+ L    N L++LP+
Sbjct: 139 LHLDDNQLRTLPKDIG-KLQKLRELLLYNNQLTMLPKDIGQLQKLQRLHLGDNQLRTLPK 197

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           D+  L NL VL +  N   L TLP  IG L +L  LD+  N++ TLP  IG L+ LQKL 
Sbjct: 198 DIGKLQNLRVLKLDSN--QLATLPKDIGKLQNLQVLDLGGNQLATLPKDIGKLQNLQKLH 255

Query: 182 LEGNPLVSPPMDV 194
           L G    + P ++
Sbjct: 256 LNGYEFTTIPKEI 268



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 104/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  NQL  LP  IG L +L+VL +  N L++LPK I   ++L  L  + N
Sbjct: 62  GKLQNLQKLYLDGNQLTTLPEDIGYLKELQVLHLYDNQLKTLPKEIGQLQNLRVLGLSHN 121

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  LP  IG +L  L+ L ++ N++  LP+ +  L  LR L    N L  LP+D+  L 
Sbjct: 122 KLTSLPKDIG-QLQKLQRLHLDDNQLRTLPKDIGKLQKLRELLLYNNQLTMLPKDIGQLQ 180

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L++  N   L TLP  IG L +L  L +  N++ TLP  IG L+ LQ L L GN L
Sbjct: 181 KLQRLHLGDN--QLRTLPKDIGKLQNLRVLKLDSNQLATLPKDIGKLQNLQVLDLGGNQL 238

Query: 188 VSPPMDV 194
            + P D+
Sbjct: 239 ATLPKDI 245



 Score =  100 bits (250), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 104/183 (56%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V++LD+ +NQL  LP  IG L  L+ L + GN L +LP+ I   + L+ L+   N+L+ 
Sbjct: 43  DVLILDLTNNQLTTLPKDIGKLQNLQKLYLDGNQLTTLPEDIGYLKELQVLHLYDNQLKT 102

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ L ++ NK+  LP+ +  L  L+ L    N L++LP+D+  L  L  
Sbjct: 103 LPKEIG-QLQNLRVLGLSHNKLTSLPKDIGQLQKLQRLHLDDNQLRTLPKDIGKLQKLRE 161

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N   L  LP  IG L  L  L +  N++ TLP  IG L+ L+ L L+ N L + P
Sbjct: 162 LLLYNN--QLTMLPKDIGQLQKLQRLHLGDNQLRTLPKDIGKLQNLRVLKLDSNQLATLP 219

Query: 192 MDV 194
            D+
Sbjct: 220 KDI 222



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 1/121 (0%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           +++NQL  LP  IG L KL+ L +  N L +LPK I   ++L  L  + N+L  LP  IG
Sbjct: 164 LYNNQLTMLPKDIGQLQKLQRLHLGDNQLRTLPKDIGKLQNLRVLKLDSNQLATLPKDIG 223

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
            +L NL+ L +  N++  LP+ +  L +L+ L        ++P+++  L  L+ L +   
Sbjct: 224 -KLQNLQVLDLGGNQLATLPKDIGKLQNLQKLHLNGYEFTTIPKEIGQLQKLQELYLDDT 282

Query: 138 F 138
           F
Sbjct: 283 F 283



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 63/120 (52%), Gaps = 21/120 (17%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNF----------------- 138
           L ++L + T + +LD   N L +LP+D+  L NL+ L +  N                  
Sbjct: 34  LIEALQNPTDVLILDLTNNQLTTLPKDIGKLQNLQKLYLDGNQLTTLPEDIGYLKELQVL 93

Query: 139 ----QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
                 L+TLP  IG L +L  L +S+NK+T+LP  IG L+KLQ+L L+ N L + P D+
Sbjct: 94  HLYDNQLKTLPKEIGQLQNLRVLGLSHNKLTSLPKDIGQLQKLQRLHLDDNQLRTLPKDI 153



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 43/70 (61%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL + SNQL  LP  IG L  L+VLD+ GN L +LPK I   ++L++L+ N  
Sbjct: 200 GKLQNLRVLKLDSNQLATLPKDIGKLQNLQVLDLGGNQLATLPKDIGKLQNLQKLHLNGY 259

Query: 68  KLRQLPDTIG 77
           +   +P  IG
Sbjct: 260 EFTTIPKEIG 269



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 2/78 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           ++L E L+N  ++ +L+++ N   L TLP  IG L +L +L +  N++TTLP+ IG L++
Sbjct: 32  QNLIEALQNPTDVLILDLTNN--QLTTLPKDIGKLQNLQKLYLDGNQLTTLPEDIGYLKE 89

Query: 177 LQKLSLEGNPLVSPPMDV 194
           LQ L L  N L + P ++
Sbjct: 90  LQVLHLYDNQLKTLPKEI 107



 Score = 42.0 bits (97), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 32/55 (58%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEEL 62
            +L N+ VLD+  NQL  LP  IG L  L+ L ++G    ++PK I   + L+EL
Sbjct: 223 GKLQNLQVLDLGGNQLATLPKDIGKLQNLQKLHLNGYEFTTIPKEIGQLQKLQEL 277


>gi|418744965|ref|ZP_13301310.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794296|gb|EKR92206.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 465

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/208 (38%), Positives = 120/208 (57%), Gaps = 22/208 (10%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL++H+N+LK LP  IG L KLK L + GN L +LP+ IE  + LEEL+ + +
Sbjct: 127 GQLENLQVLNLHNNRLKSLPKEIGKLQKLKRLYLGGNQLRTLPQEIETLQDLEELHLSRD 186

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+  P+ IG +L +LK L ++ N++V+L Q +  L SL  L    N L +LP ++  L 
Sbjct: 187 QLKTFPEEIG-KLRSLKRLILDSNQLVVLSQEIGKLRSLERLILENNQLATLPNEIGKLQ 245

Query: 128 NLEVLNIS--------------QNFQYLE-------TLPYSIGLLMSLVELDVSYNKITT 166
           NLE LN+S              +N Q L        TLP  I  L +L +L +++N++T 
Sbjct: 246 NLEELNLSNNQLVTLPQEIGALENLQNLHLYSNQFRTLPKQIWQLQNLQDLHLAHNQLTV 305

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           LP  IG L KL+ L LE N L + P ++
Sbjct: 306 LPQEIGKLEKLEDLYLEDNQLTTLPKEI 333



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/188 (38%), Positives = 107/188 (56%), Gaps = 3/188 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++ +NQL  LP  IG L  L+ L +  N   +LPK I   ++L++L+   N
Sbjct: 242 GKLQNLEELNLSNNQLVTLPQEIGALENLQNLHLYSNQFRTLPKQIWQLQNLQDLHLAHN 301

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L  L+ L +  N++  LP+ +  L  L+ LD   N L+ LPE++  L 
Sbjct: 302 QLTVLPQEIG-KLEKLEDLYLEDNQLTTLPKEIWKLEKLKYLDLANNQLRLLPEEIGKLE 360

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L++S N   L  LP  IG L  L  LD+S N++ TLP  IG L KL+ L L GNP 
Sbjct: 361 KLKYLDLSNN--QLRLLPQKIGKLEKLKYLDLSNNQLATLPKEIGKLEKLEDLDLSGNPF 418

Query: 188 VSPPMDVV 195
            + P ++V
Sbjct: 419 TTFPKEIV 426



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/185 (38%), Positives = 113/185 (61%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+  L++ +NQL  LPN IG L  L+VL +  N L +LP+ +   ++L ELN   N+L
Sbjct: 60  LQNLRELNLENNQLATLPNEIGQLENLQVLSLYNNRLRTLPQEVGTLQNLRELNLENNQL 119

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP+ IG +L NL+ L+++ N++  LP+ +  L  L+ L    N L++LP+++E L +L
Sbjct: 120 ATLPNGIG-QLENLQVLNLHNNRLKSLPKEIGKLQKLKRLYLGGNQLRTLPQEIETLQDL 178

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           E L++S++   L+T P  IG L SL  L +  N++  L   IG LR L++L LE N L +
Sbjct: 179 EELHLSRD--QLKTFPEEIGKLRSLKRLILDSNQLVVLSQEIGKLRSLERLILENNQLAT 236

Query: 190 PPMDV 194
            P ++
Sbjct: 237 LPNEI 241



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 107/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL +++N+L+ LP  +G L  L+ L++  N L +LP  I    +L+ LN + N
Sbjct: 81  GQLENLQVLSLYNNRLRTLPQEVGTLQNLRELNLENNQLATLPNGIGQLENLQVLNLHNN 140

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG +L  LK L +  N++  LPQ +  L  L  L    + LK+ PE++  L 
Sbjct: 141 RLKSLPKEIG-KLQKLKRLYLGGNQLRTLPQEIETLQDLEELHLSRDQLKTFPEEIGKLR 199

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L +  N   L  L   IG L SL  L +  N++ TLP+ IG L+ L++L+L  N L
Sbjct: 200 SLKRLILDSN--QLVVLSQEIGKLRSLERLILENNQLATLPNEIGKLQNLEELNLSNNQL 257

Query: 188 VSPPMDV 194
           V+ P ++
Sbjct: 258 VTLPQEI 264



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/178 (36%), Positives = 103/178 (57%), Gaps = 3/178 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           ++V  L ++ +QL+ L   +G L  L+ L++  N L +LP  I    +L+ L+   N+LR
Sbjct: 38  MDVKSLHLNRDQLRTLSQEVGTLQNLRELNLENNQLATLPNEIGQLENLQVLSLYNNRLR 97

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  +G  L NL+ L++  N++  LP  +  L +L+VL+   N LKSLP+++  L  L+
Sbjct: 98  TLPQEVGT-LQNLRELNLENNQLATLPNGIGQLENLQVLNLHNNRLKSLPKEIGKLQKLK 156

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
            L +  N   L TLP  I  L  L EL +S +++ T P+ IG LR L++L L+ N LV
Sbjct: 157 RLYLGGN--QLRTLPQEIETLQDLEELHLSRDQLKTFPEEIGKLRSLKRLILDSNQLV 212



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 70/114 (61%), Gaps = 2/114 (1%)

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
           +++K+L +N +++  L Q +  L +LR L+   N L +LP ++  L NL+VL++  N   
Sbjct: 38  MDVKSLHLNRDQLRTLSQEVGTLQNLRELNLENNQLATLPNEIGQLENLQVLSLYNN--R 95

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L TLP  +G L +L EL++  N++ TLP+ IG L  LQ L+L  N L S P ++
Sbjct: 96  LRTLPQEVGTLQNLRELNLENNQLATLPNGIGQLENLQVLNLHNNRLKSLPKEI 149


>gi|260812944|ref|XP_002601180.1| hypothetical protein BRAFLDRAFT_214682 [Branchiostoma floridae]
 gi|229286471|gb|EEN57192.1| hypothetical protein BRAFLDRAFT_214682 [Branchiostoma floridae]
          Length = 854

 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 111/201 (55%), Gaps = 3/201 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL  +  LD+  N L+ LP  +G  +K+K LD+S   L +LP  +     LE L+ + N
Sbjct: 105 GRLTQLEWLDLSDNPLQTLPAEVGQFTKVKHLDLSYCQLHTLPPEVGRLTQLEWLDLSDN 164

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G +  N+K L ++  ++  LP  +  LT L  LD   N L++LP  +  L 
Sbjct: 165 PLQTLPAEVG-QFTNVKHLDLSYCQLHTLPPEVGRLTQLEWLDLSANPLQTLPAQVGQLT 223

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           N++ L++S  +  L TLP  +G L  L  LD+  N + TLP  +G L  +  L + GNPL
Sbjct: 224 NVKHLDLS--WCQLRTLPPEVGRLTQLEWLDLGSNPLQTLPAEVGQLTNISYLYVYGNPL 281

Query: 188 VSPPMDVVEQGLSAVKGYLSE 208
           + PP +V  QG+SAV+ Y  +
Sbjct: 282 IKPPSEVCMQGISAVRQYFDK 302



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 107/197 (54%), Gaps = 8/197 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKL----KVLDVSGNLLESLPKTIENCR 57
           +P+ L+  L N+  L++    +  +P  +  L++L    K LD+  N L++LP  +    
Sbjct: 27  LPDGLSG-LTNIRFLNLLKTDMATVPPVVWRLTQLEWLLKWLDLRSNPLQTLPAEVGQLT 85

Query: 58  SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK 117
           +++ L+ ++ +LR LP  +G  L  L+ L ++ N +  LP  +   T ++ LD     L 
Sbjct: 86  NVKHLDLSYCQLRTLPPEVG-RLTQLEWLDLSDNPLQTLPAEVGQFTKVKHLDLSYCQLH 144

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
           +LP ++  L  LE L++S N   L+TLP  +G   ++  LD+SY ++ TLP  +G L +L
Sbjct: 145 TLPPEVGRLTQLEWLDLSDN--PLQTLPAEVGQFTNVKHLDLSYCQLHTLPPEVGRLTQL 202

Query: 178 QKLSLEGNPLVSPPMDV 194
           + L L  NPL + P  V
Sbjct: 203 EWLDLSANPLQTLPAQV 219



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 83/175 (47%), Gaps = 28/175 (16%)

Query: 46  LESLPKTIENCRSLEELNANFNKLRQLPDTIG----FELIN------------------- 82
           + ++P  +     LEEL+ ++N    LPD +        +N                   
Sbjct: 1   MATVPPVVLKLTQLEELDLSWNSGIHLPDGLSGLTNIRFLNLLKTDMATVPPVVWRLTQL 60

Query: 83  ---LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
              LK L +  N +  LP  +  LT+++ LD     L++LP ++  L  LE L++S N  
Sbjct: 61  EWLLKWLDLRSNPLQTLPAEVGQLTNVKHLDLSYCQLRTLPPEVGRLTQLEWLDLSDN-- 118

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L+TLP  +G    +  LD+SY ++ TLP  +G L +L+ L L  NPL + P +V
Sbjct: 119 PLQTLPAEVGQFTKVKHLDLSYCQLHTLPPEVGRLTQLEWLDLSDNPLQTLPAEV 173


>gi|418667221|ref|ZP_13228634.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Pyrogenes str. 2006006960]
 gi|410757064|gb|EKR18681.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Pyrogenes str. 2006006960]
          Length = 259

 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 119/186 (63%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ +LD+  NQ K +P  I  L  L++LD+  N  +++PK I   ++L+ LN + N+
Sbjct: 71  QLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQ 130

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG +L NL+ L+++ N+++ LP+ +  L +L+VL+   N LK+LP+ +E L N
Sbjct: 131 LTTLPKEIG-KLENLQVLNLSSNQLITLPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKN 189

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +  N+  L TLP  IG L +L EL + YN+I TLP+ I  L+ L+KL+L  NP+ 
Sbjct: 190 LQTLYL--NYNQLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYENPI- 246

Query: 189 SPPMDV 194
            PP ++
Sbjct: 247 -PPQEL 251



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/130 (40%), Positives = 79/130 (60%), Gaps = 1/130 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL++ SNQL  LP  IG L  L+VL++S N L +LPK I    +L+ LN   N
Sbjct: 116 GQLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQLITLPKEIGKLENLQVLNLGSN 175

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  I  +L NL+TL +N N++  LP  +  L +L  L  + N +K+LPE++  L 
Sbjct: 176 RLKTLPKGIE-QLKNLQTLYLNYNQLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQ 234

Query: 128 NLEVLNISQN 137
           NL  L + +N
Sbjct: 235 NLRKLTLYEN 244



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R+L      L +LP+ +E L NL++L++  N    +T+P  I  L +L 
Sbjct: 42  LTEALQNSLDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYN--QFKTVPKEIEQLKNLQ 99

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LD+ YN+  T+P  IG L+ LQ L+L  N L + P ++
Sbjct: 100 MLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEI 138



 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L E L+N +++ +L +S+  Q L TLP  I  L +L  LD+ YN+  T+P  I  L+ 
Sbjct: 40  RDLTEALQNSLDVRILILSE--QKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKN 97

Query: 177 LQKLSLEGNPLVSPPMDV 194
           LQ L L  N   + P  +
Sbjct: 98  LQMLDLCYNQFKTVPKKI 115


>gi|398341356|ref|ZP_10526059.1| hypothetical protein LkirsB1_19555 [Leptospira kirschneri serovar
           Bim str. 1051]
          Length = 400

 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/184 (41%), Positives = 113/184 (61%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VLD+   +LK LP  IG L  L+ L +  N L +LP  I   ++L+ LN + N+L 
Sbjct: 46  LDVRVLDLSEQKLKTLPKEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTLNLDTNQLT 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ IG +LINL+TL +  N++VILP+ +  L +LRVL    N LK LP+++  L NL+
Sbjct: 106 TLPNEIG-QLINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKEIGQLENLQ 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++  N   L+ LP  IG L +L  LD+S N +T LP  IG L+ L++L L  N L + 
Sbjct: 165 TLDLYTN--QLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLKNLRELYLSSNQLKTL 222

Query: 191 PMDV 194
           P ++
Sbjct: 223 PKEI 226



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 111/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L+N+  LD+  NQL  LP  I  L  L+VL +S N L+ LPK I    +L+ L+   N
Sbjct: 112 GQLINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKEIGQLENLQTLDLYTN 171

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP+ IG +L NL+TL ++ N + ILP+ +  L +LR L    N LK+LP+++  L 
Sbjct: 172 QLKALPNEIG-QLKNLQTLDLSKNILTILPKEIGQLKNLRELYLSSNQLKTLPKEIGQLE 230

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++S N   L TLP  IG L +L EL +  N +TTLP  +G L+ L+ L L  N  
Sbjct: 231 NLQTLHLSDN--QLTTLPNEIGQLKNLYELYLGKNLLTTLPKEVGQLKNLKMLDLGYNQF 288

Query: 188 VSPPMDV 194
              P ++
Sbjct: 289 KIIPNEI 295



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + +NQL  LPN IG L  L+ L++  N L +LP  I    +L+ L+   N
Sbjct: 66  GQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTLNLDTNQLTTLPNEIGQLINLQTLDLIHN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L ++ N++ ILP+ +  L +L+ LD   N LK+LP ++  L 
Sbjct: 126 QLVILPKEIN-QLQNLRVLGLSNNQLKILPKEIGQLENLQTLDLYTNQLKALPNEIGQLK 184

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++S+N   L  LP  IG L +L EL +S N++ TLP  IG L  LQ L L  N L
Sbjct: 185 NLQTLDLSKNI--LTILPKEIGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQL 242

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 243 TTLPNEI 249



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/187 (40%), Positives = 110/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++ +NQL  LPN IG L  L+ LD+  N L  LPK I   ++L  L  + N
Sbjct: 89  GQLKNLQTLNLDTNQLTTLPNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNN 148

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG +L NL+TL +  N++  LP  +  L +L+ LD   N L  LP+++  L 
Sbjct: 149 QLKILPKEIG-QLENLQTLDLYTNQLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLK 207

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L +S N   L+TLP  IG L +L  L +S N++TTLP+ IG L+ L +L L  N L
Sbjct: 208 NLRELYLSSN--QLKTLPKEIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKNLL 265

Query: 188 VSPPMDV 194
            + P +V
Sbjct: 266 TTLPKEV 272



 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/243 (34%), Positives = 132/243 (54%), Gaps = 15/243 (6%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+++NQLK LPN IG L  L+ LD+S N+L  LPK I   ++L EL  + N
Sbjct: 158 GQLENLQTLDLYTNQLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLKNLRELYLSSN 217

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG +L NL+TL ++ N++  LP  +  L +L  L    N L +LP+++  L 
Sbjct: 218 QLKTLPKEIG-QLENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKNLLTTLPKEVGQLK 276

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L++   +   + +P  I  L +L  L +  N+ T LP  I  L+ LQ L L  N L
Sbjct: 277 NLKMLDLG--YNQFKIIPNEIEQLQNLRTLRLRNNQFTALPKEIRQLQNLQVLFLNNNQL 334

Query: 188 VSPPMDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGALRNHR--SEER 244
            + P ++ + Q L  +         ND++     + + KL      +  LRN+   SEE+
Sbjct: 335 KTLPNEIEKLQNLQVLDL-------NDNQLKTLPNEIEKLQNLQVLD--LRNNELSSEEK 385

Query: 245 ERF 247
           ER 
Sbjct: 386 ERI 388



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 109/200 (54%), Gaps = 3/200 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + SNQLK LP  IG L  L+ L +S N L +LP  I   ++L EL    N
Sbjct: 204 GQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKN 263

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP  +G +L NLK L +  N+  I+P  +  L +LR L  R N   +LP+++  L 
Sbjct: 264 LLTTLPKEVG-QLKNLKMLDLGYNQFKIIPNEIEQLQNLRTLRLRNNQFTALPKEIRQLQ 322

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+VL ++ N   L+TLP  I  L +L  LD++ N++ TLP+ I  L+ LQ L L  N L
Sbjct: 323 NLQVLFLNNN--QLKTLPNEIEKLQNLQVLDLNDNQLKTLPNEIEKLQNLQVLDLRNNEL 380

Query: 188 VSPPMDVVEQGLSAVKGYLS 207
            S   + + + L   + Y  
Sbjct: 381 SSEEKERIRKLLPKCQIYFE 400



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVLD     LK+LP+++  L NL+ L +  N   L TLP  IG L +L 
Sbjct: 38  LTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQTLYLWNN--QLTTLPNEIGQLKNLQ 95

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L++  N++TTLP+ IG L  LQ L L  N LV  P ++
Sbjct: 96  TLNLDTNQLTTLPNEIGQLINLQTLDLIHNQLVILPKEI 134


>gi|418727836|ref|ZP_13286423.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409958898|gb|EKO22676.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 241

 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 128/220 (58%), Gaps = 8/220 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++++NQL  LP  IG L  L+ L++  N L +L K I   ++L+EL  N+N
Sbjct: 22  GQLKNLQRLELNNNQLMTLPEEIGQLKNLQTLNLWNNQLMTLSKEIGQLKNLQELYLNYN 81

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+ L +N N++  L + +  L +L+ LD   N  K +P ++E L 
Sbjct: 82  QLTILPNEIG-QLKNLQALELNNNQLKTLSKEIGQLKNLQRLDLGYNQFKIIPNEIEQLQ 140

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+VL ++ N   L TL   IG L +L EL +SYN+ TTLP+ IG L+ LQ L L  N L
Sbjct: 141 NLQVLELNNN--QLTTLSKEIGRLQNLQELYLSYNQFTTLPEEIGQLKNLQVLELNNNQL 198

Query: 188 VSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
            +   ++       +K     +++N+  S ++K  + KL+
Sbjct: 199 KTLSKEI-----GQLKNLQRLELDNNQLSSEEKERIRKLL 233


>gi|421119314|ref|ZP_15579638.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347944|gb|EKO98795.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 289

 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/186 (40%), Positives = 118/186 (63%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ +LD+  NQ K +P  I  L  L++LD+  N  +++PK I   ++L+ LN + N+
Sbjct: 95  QLKNLQMLDLCYNQFKTVPKKIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQ 154

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG +L NL+ L+++ N++  LP+ +  L +L+VL+   N LK+LP+ +E L N
Sbjct: 155 LTTLPKEIG-KLENLQVLNLSSNQLTTLPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKN 213

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +  N+  L TLP  IG L SL EL + +N+I TLPD I  L+ L+KL+L  NP+ 
Sbjct: 214 LQTLYL--NYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQNLRKLTLYENPI- 270

Query: 189 SPPMDV 194
            PP ++
Sbjct: 271 -PPQEL 275



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/130 (40%), Positives = 79/130 (60%), Gaps = 1/130 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL++ SNQL  LP  IG L  L+VL++S N L +LPK I    +L+ LN   N
Sbjct: 140 GQLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQLTTLPKEIGKLENLQVLNLGSN 199

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  I  +L NL+TL +N N++  LP+ +  L SL  L  + N + +LP+++  L 
Sbjct: 200 RLKTLPKGIE-QLKNLQTLYLNYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQ 258

Query: 128 NLEVLNISQN 137
           NL  L + +N
Sbjct: 259 NLRKLTLYEN 268



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R+L      L +LP+ +E L NL++L++  N    +T+P  I  L +L 
Sbjct: 66  LTEALQNSLDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYN--QFKTVPKKIEQLKNLQ 123

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LD+ YN+  T+P  IG L+ LQ L+L  N L + P ++
Sbjct: 124 MLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEI 162



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L E L+N +++ +L +S+  Q L TLP  I  L +L  LD+ YN+  T+P  I  L+ 
Sbjct: 64  RDLTEALQNSLDVRILILSE--QKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKKIEQLKN 121

Query: 177 LQKLSLEGNPLVSPPMDV 194
           LQ L L  N   + P  +
Sbjct: 122 LQMLDLCYNQFKTVPKKI 139


>gi|124003508|ref|ZP_01688357.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123991077|gb|EAY30529.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 646

 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/184 (43%), Positives = 118/184 (64%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE+  ++L N+ VL++ S+ L  LPN+IG L  L +L++  N L  LP +I   +SLE+
Sbjct: 192 LPENF-SQLHNLKVLNLKSSGLVALPNNIGQLKNLTILNLRENYLTKLPTSIGQLKSLEK 250

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+L  LP +IG +L +LK L +  N++  LP S+  L +L+ L   +N L SL +
Sbjct: 251 LDLQGNQLTILPISIG-QLKSLKKLDLGANQLTTLPTSIGQLKNLQQLFLEVNTLTSLLD 309

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           D+  L  L+VLN+ +N   L TLP SIG L SL  L +S NK+T LP S G L+KL++L+
Sbjct: 310 DIGKLKQLKVLNLRRN--RLTTLPNSIGRLKSLRWLSLSSNKLTRLPKSFGQLKKLEELN 367

Query: 182 LEGN 185
           LEGN
Sbjct: 368 LEGN 371



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 109/223 (48%), Gaps = 45/223 (20%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  NQL  LP SIG L  LK LD+  N L +LP +I   ++L++L    N L  L D 
Sbjct: 251 LDLQGNQLTILPISIGQLKSLKKLDLGANQLTTLPTSIGQLKNLQQLFLEVNTLTSLLDD 310

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L  LK L++  N++  LP S+  L SLR L    N L  LP+    L  LE LN+ 
Sbjct: 311 IG-KLKQLKVLNLRRNRLTTLPNSIGRLKSLRWLSLSSNKLTRLPKSFGQLKKLEELNLE 369

Query: 136 QNF-------------------------------------QYL-------ETLPYSIGLL 151
            N+                                     QYL       + LP SIG L
Sbjct: 370 GNYFQTMLTILGQLKSLKKLYLASNNLTTLPENIGQLPELQYLTLVRNKLDRLPESIGQL 429

Query: 152 MSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             L  LD+  N+++TLP+S+G L+KL++L++  NPLV+ P  +
Sbjct: 430 QELQYLDLRRNRLSTLPESLGQLKKLEELNIGANPLVTLPNSI 472



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/195 (37%), Positives = 117/195 (60%), Gaps = 6/195 (3%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNL-LESLPKTIENCRSLE 60
           +P S  A+L N+  L++  N+   LP S+  L  L+ L+++ NL L+ LP  IE  ++L+
Sbjct: 75  LPASF-AKLQNLEELNLTRNKFTTLPASVTKLQNLEELNLTDNLSLKKLPDNIEQLKNLQ 133

Query: 61  ELNANFN-KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
           +LN   N  L++LP+ I  +L  LK L++N +  +ILP ++    SLR+L    + L +L
Sbjct: 134 KLNLTSNLSLKKLPENIT-QLKKLKVLNLNGSSRIILPANIQLPESLRILHMNDHLLTTL 192

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE+   L NL+VLN+  +   L  LP +IG L +L  L++  N +T LP SIG L+ L+K
Sbjct: 193 PENFSQLHNLKVLNLKSSG--LVALPNNIGQLKNLTILNLRENYLTKLPTSIGQLKSLEK 250

Query: 180 LSLEGNPLVSPPMDV 194
           L L+GN L   P+ +
Sbjct: 251 LDLQGNQLTILPISI 265



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 103/194 (53%), Gaps = 26/194 (13%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE++  +L  +  L +  N+L  LP SIG L +L+ LD+  N L +LP+++   + LEE
Sbjct: 399 LPENI-GQLPELQYLTLVRNKLDRLPESIGQLQELQYLDLRRNRLSTLPESLGQLKKLEE 457

Query: 62  LNANFNKLRQLPDTIGF-----------------------ELINLKTLSINCNKIVILPQ 98
           LN   N L  LP++IG                        ++ +L+ L +  N++  LP 
Sbjct: 458 LNIGANPLVTLPNSIGKLKNLKKLYLATANQTPKSFASITQITSLEELYLLVNRLDTLPT 517

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
           S+  L +L+ L+   N +  +PE +  L NL+ L +  N   L  L  +IG L S++ LD
Sbjct: 518 SIQKLKNLKKLNLLYNQISIVPESIGKLKNLQALILGNN--KLTVLTQNIGQLESILRLD 575

Query: 159 VSYNKITTLPDSIG 172
           +S NK+TTLP SIG
Sbjct: 576 LSSNKLTTLPQSIG 589



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 84/148 (56%), Gaps = 3/148 (2%)

Query: 48  SLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
           SL + ++    + +LN   N+L  LP  IG EL NLK L++  N++  LP S   L +L 
Sbjct: 28  SLTEALKTPEQVYKLNLEHNQLTTLPANIG-ELKNLKKLNLEYNQLTTLPASFAKLQNLE 86

Query: 108 VLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYN-KITT 166
            L+   N   +LP  +  L NLE LN++ N   L+ LP +I  L +L +L+++ N  +  
Sbjct: 87  ELNLTRNKFTTLPASVTKLQNLEELNLTDNLS-LKKLPDNIEQLKNLQKLNLTSNLSLKK 145

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           LP++I  L+KL+ L+L G+  +  P ++
Sbjct: 146 LPENITQLKKLKVLNLNGSSRIILPANI 173



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 2/84 (2%)

Query: 114 NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGC 173
           N L +LP ++  L NL+ LN+   +  L TLP S   L +L EL+++ NK TTLP S+  
Sbjct: 47  NQLTTLPANIGELKNLKKLNLE--YNQLTTLPASFAKLQNLEELNLTRNKFTTLPASVTK 104

Query: 174 LRKLQKLSLEGNPLVSPPMDVVEQ 197
           L+ L++L+L  N  +    D +EQ
Sbjct: 105 LQNLEELNLTDNLSLKKLPDNIEQ 128



 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 60/93 (64%), Gaps = 2/93 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++PES+  +L N+  L + +N+L  L  +IG L  +  LD+S N L +LP++I   + L+
Sbjct: 537 IVPESI-GKLKNLQALILGNNKLTVLTQNIGQLESILRLDLSSNKLTTLPQSIGKLKKLK 595

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           +LN ++N L+ LP+ IG +L NLK L++  N I
Sbjct: 596 QLNLSYNNLKSLPEHIG-QLKNLKDLNLRKNPI 627



 Score = 44.3 bits (103), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 2/79 (2%)

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
           SL E L+    +  LN+  N   L TLP +IG L +L +L++ YN++TTLP S   L+ L
Sbjct: 28  SLTEALKTPEQVYKLNLEHN--QLTTLPANIGELKNLKKLNLEYNQLTTLPASFAKLQNL 85

Query: 178 QKLSLEGNPLVSPPMDVVE 196
           ++L+L  N   + P  V +
Sbjct: 86  EELNLTRNKFTTLPASVTK 104


>gi|118086832|ref|XP_001232976.1| PREDICTED: leucine-rich repeat-containing protein 30 [Gallus
           gallus]
          Length = 298

 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/211 (37%), Positives = 120/211 (56%), Gaps = 12/211 (5%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  +VVL++  N+LKCLP  IG L  LKVL V+ N L  +P  +  CR LE L+ + N
Sbjct: 87  GKLDRLVVLNLGGNRLKCLPKEIGLLRNLKVLFVNMNCLTEVPAELSLCRKLEVLSLSHN 146

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            + QLP +   +L +LK L+++ N+ V +P  +  L SL  L    N L+++ E ++ L+
Sbjct: 147 CISQLPSSFT-DLTSLKKLNLSNNRFVQIPLCIFALRSLDFLHLGSNRLENIAESVQYLV 205

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK-------- 179
           NL++  +  N   + TLP S+  + +L  L+V YN I TLPD +  LR+L +        
Sbjct: 206 NLQIFIVENN--NIRTLPRSLCFITALELLNVDYNSIQTLPDDLYLLRRLPRIAWNPMDK 263

Query: 180 -LSLEGNPLVSPPMDVVEQGLSAVKGYLSEK 209
            L +  NPL  P  ++VE GL A+  YL EK
Sbjct: 264 GLHISHNPLSRPLPEIVEGGLDALFNYLKEK 294


>gi|418698057|ref|ZP_13259036.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410762761|gb|EKR28920.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 289

 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 118/186 (63%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ +LD+  NQ K +P  I  L  L++LD+  N  +++PK I   ++L+ LN + N+
Sbjct: 95  QLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQ 154

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG +L NL+ L+++ N+++  P+ +  L +L+VL+   N LK+LP+ +E L N
Sbjct: 155 LTTLPKEIG-KLENLQVLNLSSNQLITFPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKN 213

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +  N+  L TLP  IG L SL EL + +N+I TLPD I  L+ L+KL+L  NP+ 
Sbjct: 214 LQTLYL--NYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQNLRKLTLYENPI- 270

Query: 189 SPPMDV 194
            PP ++
Sbjct: 271 -PPQEL 275



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/130 (39%), Positives = 78/130 (60%), Gaps = 1/130 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL++ SNQL  LP  IG L  L+VL++S N L + PK I    +L+ LN   N
Sbjct: 140 GQLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQLITFPKEIGKLENLQVLNLGSN 199

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  I  +L NL+TL +N N++  LP+ +  L SL  L  + N + +LP+++  L 
Sbjct: 200 RLKTLPKGIE-QLKNLQTLYLNYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQ 258

Query: 128 NLEVLNISQN 137
           NL  L + +N
Sbjct: 259 NLRKLTLYEN 268



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R+L      L +LP+ +E L NL++L++  N    +T+P  I  L +L 
Sbjct: 66  LTEALQNSLDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYN--QFKTVPKEIEQLKNLQ 123

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LD+ YN+  T+P  IG L+ LQ L+L  N L + P ++
Sbjct: 124 MLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEI 162



 Score = 40.0 bits (92), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L E L+N +++ +L +S+  Q L TLP  I  L +L  LD+ YN+  T+P  I  L+ 
Sbjct: 64  RDLTEALQNSLDVRILILSE--QKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKN 121

Query: 177 LQKLSLEGNPLVSPPMDV 194
           LQ L L  N   + P  +
Sbjct: 122 LQMLDLCYNQFKTVPKKI 139


>gi|359683928|ref|ZP_09253929.1| hypothetical protein Lsan2_04276 [Leptospira santarosai str.
           2000030832]
          Length = 594

 Score =  114 bits (286), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/186 (40%), Positives = 111/186 (59%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L  +  L +  NQL  LP  IG L KLKVL++ GN   +LPK IE  + L+EL+   N+
Sbjct: 143 KLQKLQKLSLAHNQLTTLPKEIGKLQKLKVLNLDGNQFTTLPKEIEKLQKLKELHLGSNQ 202

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
              LP  I  +L NL+ L +N N++  LP+ +  L +L+ L    N LK+LP+++  L N
Sbjct: 203 FTTLPKEIK-KLQNLQGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQLKTLPKEIGKLQN 261

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L+++ N   L TLP  IG L +L  L + YN++TTLP  IG L+KLQ LS   N L 
Sbjct: 262 LQGLHLNNN--QLTTLPKEIGKLQNLQGLGLHYNQLTTLPKEIGKLQKLQVLSFYSNELT 319

Query: 189 SPPMDV 194
           + P ++
Sbjct: 320 TLPKEI 325



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 115/187 (61%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +++NQLK LP  IG L  L+ L ++ N L++LPK I   ++L+ L+ N N
Sbjct: 211 KKLQNLQGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQLKTLPKEIGKLQNLQGLHLNNN 270

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L ++ N++  LP+ +  L  L+VL    N L +LP++++ L 
Sbjct: 271 QLTTLPKEIG-KLQNLQGLGLHYNQLTTLPKEIGKLQKLQVLSFYSNELTTLPKEIKKLQ 329

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++  N   L TL   IG L  L EL +S N++TTLP  IG L+KLQ+L L  N L
Sbjct: 330 NLQWLDLHSN--QLTTLSKEIGKLQKLQELHLSSNQLTTLPKEIGKLQKLQELHLGDNQL 387

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 388 TTLPEEI 394



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/187 (40%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+HSNQL  L   IG L KL+ L +S N L +LPK I   + L+EL+   N
Sbjct: 326 KKLQNLQWLDLHSNQLTTLSKEIGKLQKLQELHLSSNQLTTLPKEIGKLQKLQELHLGDN 385

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG      K    N N++  LP+ + +L  LR LD   N L +LP ++ NL 
Sbjct: 386 QLTTLPEEIGKLQKLKKLYLYN-NRLTTLPKEIGNLQKLRGLDLGNNKLTALPIEIGNLQ 444

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L ++  F  L+TLP  IG L  L  LD+S N++TT+P+ IG L+KL+ L L  N L
Sbjct: 445 KLKWLYLT--FNQLKTLPKEIGNLQKLRGLDLSDNQLTTIPEEIGNLQKLRGLDLSDNQL 502

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 503 TTLPKEI 509



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 116/223 (52%), Gaps = 23/223 (10%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  +  LD++ N L  LP  IG L KL  L +  N L + PK IE  + L++L+   N
Sbjct: 96  GKLQKLEWLDLNYNSLATLPKEIGKLQKLDDLRLPNNQLTTFPKEIEKLQKLQKLSLAHN 155

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L  LK L+++ N+   LP+ +  L  L+ L    N   +LP++++ L 
Sbjct: 156 QLTTLPKEIG-KLQKLKVLNLDGNQFTTLPKEIEKLQKLKELHLGSNQFTTLPKEIKKLQ 214

Query: 128 NLEVLNIS--------------QNFQ-------YLETLPYSIGLLMSLVELDVSYNKITT 166
           NL+ L+++              QN Q        L+TLP  IG L +L  L ++ N++TT
Sbjct: 215 NLQGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQLTT 274

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGLSAVKGYLSE 208
           LP  IG L+ LQ L L  N L + P ++ + Q L  +  Y +E
Sbjct: 275 LPKEIGKLQNLQGLGLHYNQLTTLPKEIGKLQKLQVLSFYSNE 317



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 111/210 (52%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESL------------------ 49
             L N+  L +++NQL  LP  IG L KL+ LD++ N L +L                  
Sbjct: 73  GNLQNLQKLSLYNNQLTTLPKEIGKLQKLEWLDLNYNSLATLPKEIGKLQKLDDLRLPNN 132

Query: 50  -----PKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLT 104
                PK IE  + L++L+   N+L  LP  IG +L  LK L+++ N+   LP+ +  L 
Sbjct: 133 QLTTFPKEIEKLQKLQKLSLAHNQLTTLPKEIG-KLQKLKVLNLDGNQFTTLPKEIEKLQ 191

Query: 105 SLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
            L+ L    N   +LP++++ L NL+ L+++ N   L+TLP  IG L +L  L ++ N++
Sbjct: 192 KLKELHLGSNQFTTLPKEIKKLQNLQGLHLNNN--QLKTLPKEIGKLQNLQGLHLNNNQL 249

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            TLP  IG L+ LQ L L  N L + P ++
Sbjct: 250 KTLPKEIGKLQNLQGLHLNNNQLTTLPKEI 279



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 97/187 (51%), Gaps = 7/187 (3%)

Query: 12  NVVVLDVHS----NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +V  LD+ +    ++L  LP  IG L  L+ L +  N L +LPK I   + LE L+ N+N
Sbjct: 50  DVRYLDLQAKDSNHKLTNLPKEIGNLQNLQKLSLYNNQLTTLPKEIGKLQKLEWLDLNYN 109

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP  IG +L  L  L +  N++   P+ +  L  L+ L    N L +LP+++  L 
Sbjct: 110 SLATLPKEIG-KLQKLDDLRLPNNQLTTFPKEIEKLQKLQKLSLAHNQLTTLPKEIGKLQ 168

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+VLN+  N     TLP  I  L  L EL +  N+ TTLP  I  L+ LQ L L  N L
Sbjct: 169 KLKVLNLDGN--QFTTLPKEIEKLQKLKELHLGSNQFTTLPKEIKKLQNLQGLHLNNNQL 226

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 227 KTLPKEI 233



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 69/115 (60%), Gaps = 1/115 (0%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           NQLK LP  IG L KL+ LD+S N L ++P+ I N + L  L+ + N+L  LP  IG  L
Sbjct: 454 NQLKTLPKEIGNLQKLRGLDLSDNQLTTIPEEIGNLQKLRGLDLSDNQLTTLPKEIG-NL 512

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
            +L+ L ++ N++  LP+ + +L SL  L+   N L S PE++  L +L+ L + 
Sbjct: 513 QDLEVLYLSGNQLTTLPKEIENLQSLESLNLSNNPLTSFPEEIGKLQHLKWLRLE 567



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 3/97 (3%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE +   L  +  LD+  NQL  LP  IG L  L+VL +SGN L +LPK IEN +SLE 
Sbjct: 482 IPEEI-GNLQKLRGLDLSDNQLTTLPKEIGNLQDLEVLYLSGNQLTTLPKEIENLQSLES 540

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ 98
           LN + N L   P+ IG +L +LK L +  N   +LPQ
Sbjct: 541 LNLSNNPLTSFPEEIG-KLQHLKWLRLE-NIPTLLPQ 575



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 1/94 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  NQL  +P  IG L KL+ LD+S N L +LPK I N + LE L  + N+L  LP  
Sbjct: 472 LDLSDNQLTTIPEEIGNLQKLRGLDLSDNQLTTLPKEIGNLQDLEVLYLSGNQLTTLPKE 531

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           I   L +L++L+++ N +   P+ +  L  L+ L
Sbjct: 532 IE-NLQSLESLNLSNNPLTSFPEEIGKLQHLKWL 564


>gi|418740905|ref|ZP_13297281.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|410751500|gb|EKR08477.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 400

 Score =  114 bits (286), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/184 (40%), Positives = 111/184 (60%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VLD+   +LK LP  IG L  L+VL+++ N L +LPK I   ++L+ LN   N+L 
Sbjct: 46  LDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQWLNLVTNQLT 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ IG +L N +TL ++ N++  LP+ +  L +LR L    N   + P+++  L NL+
Sbjct: 106 TLPEEIG-QLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQ 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+  N   L+TLP  IG L +L EL +SYN++ TL   IG L+ LQ L L  N L + 
Sbjct: 165 QLNLYAN--QLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTL 222

Query: 191 PMDV 194
           P ++
Sbjct: 223 PKEI 226



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 116/208 (55%), Gaps = 22/208 (10%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++++NQLK LPN IG L  L+ L +S N L++L   I   ++L+ L+ N N
Sbjct: 158 GQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDN 217

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG +L NL+ L +N N+   +P+ +  L +L+VLD   N  K++ E++  L 
Sbjct: 218 QLKTLPKEIG-QLKNLQVLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVSEEIGQLK 276

Query: 128 NLEVL---------------------NISQNFQYLETLPYSIGLLMSLVELDVSYNKITT 166
           NL++L                      +S N   L TLP  I  L +L EL +SYN++ T
Sbjct: 277 NLQMLFLNNNQLKTLSAEIGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLKT 336

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L   IG L+ L+KLSL  N L + P ++
Sbjct: 337 LSAEIGQLKNLKKLSLRDNQLTTLPKEI 364



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL++++NQL  LP  IG L  L+ L++  N L +LP+ I   ++ + L  + N
Sbjct: 66  GQLQNLQVLELNNNQLATLPKEIGQLKNLQWLNLVTNQLTTLPEEIGQLQNFQTLVLSKN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +N N+    P+ +  L +L+ L+   N LK+LP ++  L 
Sbjct: 126 RLTTLPKEIG-QLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQ 184

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L++S N   L+TL   IG L +L  LD++ N++ TLP  IG L+ LQ L L  N  
Sbjct: 185 NLRELHLSYN--QLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQVLDLNNNQF 242

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 243 KTVPEEI 249



 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 60/99 (60%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVLD     LK+LP+++  L NL+VL ++ N   L TLP  IG L +L 
Sbjct: 38  LTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNN--QLATLPKEIGQLKNLQ 95

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L++  N++TTLP+ IG L+  Q L L  N L + P ++
Sbjct: 96  WLNLVTNQLTTLPEEIGQLQNFQTLVLSKNRLTTLPKEI 134


>gi|124010200|ref|ZP_01694856.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123983744|gb|EAY24171.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 356

 Score =  114 bits (286), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/192 (39%), Positives = 106/192 (55%), Gaps = 3/192 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N++ L ++ NQL  LP  IG L KL +L + GN LE LPK+I N R LE L+  +N
Sbjct: 161 GQLKNLISLTLNGNQLVELPQEIGSLGKLALLYLGGNKLECLPKSIGNLRELESLHLGYN 220

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LPD I  +L NL  L +  N++  LP  +  L  L+ +  + N L+ LP+++  L 
Sbjct: 221 NLKGLPDEIQ-QLTNLGWLYLENNQLTALPAGIGGLKKLKKMGLQDNRLRKLPKEIGQLG 279

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+  N   L  LP  I  L SL E D+  N++  LP+ IG L  LQKL LE N  
Sbjct: 280 NLQELNLKNN--RLRRLPEEIDQLTSLREFDLENNRLRNLPEEIGQLANLQKLYLEHNRF 337

Query: 188 VSPPMDVVEQGL 199
                  + Q L
Sbjct: 338 SKAKQRKIRQWL 349



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/222 (37%), Positives = 114/222 (51%), Gaps = 6/222 (2%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +   QLK LP  IG L  L++L +SG+ L SLPK+I   + L+ L+ N  KL  LP  
Sbjct: 77  LTIECKQLKELPEEIGELENLEILTLSGSKLTSLPKSIGKLKKLKILDLNRGKLISLPKE 136

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L NL  L +  N++V LP+ +  L +L  L    N L  LP+++ +L  L +L + 
Sbjct: 137 IG-NLTNLYKLRVGLNQLVELPKEIGQLKNLISLTLNGNQLVELPQEIGSLGKLALLYLG 195

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            N   LE LP SIG L  L  L + YN +  LPD I  L  L  L LE N L + P  + 
Sbjct: 196 GN--KLECLPKSIGNLRELESLHLGYNNLKGLPDEIQQLTNLGWLYLENNQLTALPAGI- 252

Query: 196 EQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGALR 237
             GL  +K  +  + N   K PK+   +G L +    N  LR
Sbjct: 253 -GGLKKLK-KMGLQDNRLRKLPKEIGQLGNLQELNLKNNRLR 292



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/197 (39%), Positives = 116/197 (58%), Gaps = 4/197 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +   L N+ +L +  ++L  LP SIG L KLK+LD++   L SLPK I N  +L +
Sbjct: 87  LPEEI-GELENLEILTLSGSKLTSLPKSIGKLKKLKILDLNRGKLISLPKEIGNLTNLYK 145

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+L +LP  IG +L NL +L++N N++V LPQ +  L  L +L    N L+ LP+
Sbjct: 146 LRVGLNQLVELPKEIG-QLKNLISLTLNGNQLVELPQEIGSLGKLALLYLGGNKLECLPK 204

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + NL  LE L++  N   L+ LP  I  L +L  L +  N++T LP  IG L+KL+K+ 
Sbjct: 205 SIGNLRELESLHLGYN--NLKGLPDEIQQLTNLGWLYLENNQLTALPAGIGGLKKLKKMG 262

Query: 182 LEGNPLVSPPMDVVEQG 198
           L+ N L   P ++ + G
Sbjct: 263 LQDNRLRKLPKEIGQLG 279



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 21/137 (15%)

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS------- 135
           LK++ +  + + +L   +    SL+ L      LK LPE++  L NLE+L +S       
Sbjct: 51  LKSMVLRNDSLTVLSSRIAEFKSLKRLTIECKQLKELPEEIGELENLEILTLSGSKLTSL 110

Query: 136 --------------QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
                          N   L +LP  IG L +L +L V  N++  LP  IG L+ L  L+
Sbjct: 111 PKSIGKLKKLKILDLNRGKLISLPKEIGNLTNLYKLRVGLNQLVELPKEIGQLKNLISLT 170

Query: 182 LEGNPLVSPPMDVVEQG 198
           L GN LV  P ++   G
Sbjct: 171 LNGNQLVELPQEIGSLG 187


>gi|408490495|ref|YP_006866864.1| lipoprotein, leucine rich repeat protein [Psychroflexus torquis
           ATCC 700755]
 gi|408467770|gb|AFU68114.1| lipoprotein, leucine rich repeat protein [Psychroflexus torquis
           ATCC 700755]
          Length = 495

 Score =  114 bits (286), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/179 (44%), Positives = 109/179 (60%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+       LP SIG L+ LK L++  N L +LP++I N  SLEEL    N L  LP++
Sbjct: 236 LDLSQCGFTTLPESIGNLTSLKKLNLVSNNLTTLPESIGNLTSLEELYLGKNNLTTLPES 295

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L  LKT     NK+ +LP+S+ +LTSL  L  R   L +LPE + NLI+LE L ++
Sbjct: 296 IG-NLSRLKTFFSGSNKLSVLPESIGNLTSLEELFLRETDLTTLPESIGNLISLERLYLN 354

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +    L  LP SIG L SL +L++  N++TTLP+SIG L +L  L L+GN L + P  +
Sbjct: 355 E--SNLTALPQSIGNLTSLEKLNLDGNRLTTLPESIGNLTRLDLLDLQGNKLTTLPESI 411



 Score =  110 bits (276), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 83/193 (43%), Positives = 113/193 (58%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+   L ++  L +  N L  LP SIG LS+LK      N L  LP++I N  SLEE
Sbjct: 269 LPESI-GNLTSLEELYLGKNNLTTLPESIGNLSRLKTFFSGSNKLSVLPESIGNLTSLEE 327

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L      L  LP++IG  LI+L+ L +N + +  LPQS+ +LTSL  L+   N L +LPE
Sbjct: 328 LFLRETDLTTLPESIG-NLISLERLYLNESNLTALPQSIGNLTSLEKLNLDGNRLTTLPE 386

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + NL  L++L++  N   L TLP SIG L SL E  ++ N +T LP+SIG L KL  L 
Sbjct: 387 SIGNLTRLDLLDLQGN--KLTTLPESIGNLTSLDEFILNNNALTVLPESIGNLIKLSALY 444

Query: 182 LEGNPLVSPPMDV 194
           L GN L + P  +
Sbjct: 445 LFGNDLTTLPESI 457



 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/156 (41%), Positives = 97/156 (62%), Gaps = 3/156 (1%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN+L  LP SIG L+ L+ L +    L +LP++I N  SLE L  N + L  LP +IG  
Sbjct: 309 SNKLSVLPESIGNLTSLEELFLRETDLTTLPESIGNLISLERLYLNESNLTALPQSIG-N 367

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+ L+++ N++  LP+S+ +LT L +LD + N L +LPE + NL +L+   ++ N  
Sbjct: 368 LTSLEKLNLDGNRLTTLPESIGNLTRLDLLDLQGNKLTTLPESIGNLTSLDEFILNNNA- 426

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLR 175
            L  LP SIG L+ L  L +  N +TTLP+SIG L+
Sbjct: 427 -LTVLPESIGNLIKLSALYLFGNDLTTLPESIGSLK 461



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/176 (36%), Positives = 98/176 (55%), Gaps = 4/176 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++PES+   L ++  L +    L  LP SIG L  L+ L ++ + L +LP++I N  SLE
Sbjct: 314 VLPESI-GNLTSLEELFLRETDLTTLPESIGNLISLERLYLNESNLTALPQSIGNLTSLE 372

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +LN + N+L  LP++IG  L  L  L +  NK+  LP+S+ +LTSL       N L  LP
Sbjct: 373 KLNLDGNRLTTLPESIG-NLTRLDLLDLQGNKLTTLPESIGNLTSLDEFILNNNALTVLP 431

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           E + NLI L  L +  N   L TLP SIG L + + + +  ++ T    SI  ++K
Sbjct: 432 ESIGNLIKLSALYLFGND--LTTLPESIGSLKNNLTIYMLKSQYTRCEKSIKLIKK 485



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/102 (40%), Positives = 55/102 (53%), Gaps = 2/102 (1%)

Query: 93  IVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLM 152
           I  LP+ +  L+ L  LD       +LPE + NL +L+ LN+  N   L TLP SIG L 
Sbjct: 220 IPYLPEEIGSLSKLEELDLSQCGFTTLPESIGNLTSLKKLNLVSN--NLTTLPESIGNLT 277

Query: 153 SLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           SL EL +  N +TTLP+SIG L +L+      N L   P  +
Sbjct: 278 SLEELYLGKNNLTTLPESIGNLSRLKTFFSGSNKLSVLPESI 319



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 77/137 (56%), Gaps = 13/137 (9%)

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LPD  G+E   +  L++   K +   ++  ++TS+ +  A    +  LPE++ +L  LE 
Sbjct: 183 LPD--GYEANAMNYLTVKNFKSI---KTYFNVTSIVITKAH--PIPYLPEEIGSLSKLEE 235

Query: 132 LNISQ-NFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
           L++SQ  F    TLP SIG L SL +L++  N +TTLP+SIG L  L++L L  N L + 
Sbjct: 236 LDLSQCGFT---TLPESIGNLTSLKKLNLVSNNLTTLPESIGNLTSLEELYLGKNNLTTL 292

Query: 191 PMDVVEQGLSAVKGYLS 207
           P  +    LS +K + S
Sbjct: 293 PESI--GNLSRLKTFFS 307


>gi|422002227|ref|ZP_16349465.1| hypothetical protein LSS_01912 [Leptospira santarosai serovar
           Shermani str. LT 821]
 gi|417259159|gb|EKT88538.1| hypothetical protein LSS_01912 [Leptospira santarosai serovar
           Shermani str. LT 821]
          Length = 433

 Score =  114 bits (285), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 78/193 (40%), Positives = 117/193 (60%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L N+  +D ++NQLK LP  IG L  L+ L +S N +  LPK I N + L++
Sbjct: 206 IPKEI-EQLQNLQEMDSNNNQLKTLPKEIGNLQHLQKLYLSSNKITILPKEIGNLQHLQK 264

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + NK+  LP  IG  L  L+ L +  NK+  LP+ +  L +L+VL    N L ++P+
Sbjct: 265 LYLSSNKITILPKEIG-NLQKLEYLYLEVNKLTTLPKEIGQLRNLKVLYLDHNNLANIPK 323

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++ NL NL+ L+++ N   L TLP  IG L +L  LD++ NK+TTLP  IG L+ L+ L 
Sbjct: 324 EIGNLQNLQTLDLNNN--KLTTLPKEIGNLQNLQTLDLNNNKLTTLPQEIGNLQSLESLD 381

Query: 182 LEGNPLVSPPMDV 194
           L  NPL S P ++
Sbjct: 382 LSDNPLTSFPEEI 394



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L + SN++  LP  IG L  L+ L +S N +  LPK I N + LE L    NKL  LP  
Sbjct: 242 LYLSSNKITILPKEIGNLQHLQKLYLSSNKITILPKEIGNLQKLEYLYLEVNKLTTLPKE 301

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NLK L ++ N +  +P+ + +L +L+ LD   N L +LP+++ NL NL+ L+++
Sbjct: 302 IG-QLRNLKVLYLDHNNLANIPKEIGNLQNLQTLDLNNNKLTTLPKEIGNLQNLQTLDLN 360

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            N   L TLP  IG L SL  LD+S N +T+ P+ IG L+ L+ L LE  P + P  + +
Sbjct: 361 NN--KLTTLPQEIGNLQSLESLDLSDNPLTSFPEEIGKLQHLKWLRLENIPTLLPQKEKI 418

Query: 196 EQGLSAV 202
            + L  V
Sbjct: 419 RKLLPNV 425



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 111/209 (53%), Gaps = 24/209 (11%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++  L +  NQL  +P     L  L+ L +S N L ++PK IE  ++L+E+++N N
Sbjct: 165 GKLQSLQELILGKNQLTTIPKEFWQLQYLQRLSLSFNQLTAIPKEIEQLQNLQEMDSNNN 224

Query: 68  KLRQLPDTIG----------------------FELINLKTLSINCNKIVILPQSLTHLTS 105
           +L+ LP  IG                        L +L+ L ++ NKI ILP+ + +L  
Sbjct: 225 QLKTLPKEIGNLQHLQKLYLSSNKITILPKEIGNLQHLQKLYLSSNKITILPKEIGNLQK 284

Query: 106 LRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
           L  L   +N L +LP+++  L NL+VL +  N   L  +P  IG L +L  LD++ NK+T
Sbjct: 285 LEYLYLEVNKLTTLPKEIGQLRNLKVLYLDHN--NLANIPKEIGNLQNLQTLDLNNNKLT 342

Query: 166 TLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           TLP  IG L+ LQ L L  N L + P ++
Sbjct: 343 TLPKEIGNLQNLQTLDLNNNKLTTLPQEI 371



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 10/168 (5%)

Query: 34  SKLKVLDV-------SGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTL 86
           + ++VLD+       S + L +LPK I   +SL+EL    N+L  +P    ++L  L+ L
Sbjct: 138 TDVRVLDLQIREGENSNDPLTTLPKEIGKLQSLQELILGKNQLTTIPKEF-WQLQYLQRL 196

Query: 87  SINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPY 146
           S++ N++  +P+ +  L +L+ +D+  N LK+LP+++ NL +L+ L +S N   +  LP 
Sbjct: 197 SLSFNQLTAIPKEIEQLQNLQEMDSNNNQLKTLPKEIGNLQHLQKLYLSSN--KITILPK 254

Query: 147 SIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            IG L  L +L +S NKIT LP  IG L+KL+ L LE N L + P ++
Sbjct: 255 EIGNLQHLQKLYLSSNKITILPKEIGNLQKLEYLYLEVNKLTTLPKEI 302



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 103/190 (54%), Gaps = 10/190 (5%)

Query: 12  NVVVLDVH-------SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNA 64
           +V VLD+        ++ L  LP  IG L  L+ L +  N L ++PK     + L+ L+ 
Sbjct: 139 DVRVLDLQIREGENSNDPLTTLPKEIGKLQSLQELILGKNQLTTIPKEFWQLQYLQRLSL 198

Query: 65  NFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLE 124
           +FN+L  +P  I  +L NL+ +  N N++  LP+ + +L  L+ L    N +  LP+++ 
Sbjct: 199 SFNQLTAIPKEIE-QLQNLQEMDSNNNQLKTLPKEIGNLQHLQKLYLSSNKITILPKEIG 257

Query: 125 NLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEG 184
           NL +L+ L +S N   +  LP  IG L  L  L +  NK+TTLP  IG LR L+ L L+ 
Sbjct: 258 NLQHLQKLYLSSN--KITILPKEIGNLQKLEYLYLEVNKLTTLPKEIGQLRNLKVLYLDH 315

Query: 185 NPLVSPPMDV 194
           N L + P ++
Sbjct: 316 NNLANIPKEI 325



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 1/102 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL +  N L  +P  IG L  L+ LD++ N L +LPK I N ++L+ L+ N N
Sbjct: 303 GQLRNLKVLYLDHNNLANIPKEIGNLQNLQTLDLNNNKLTTLPKEIGNLQNLQTLDLNNN 362

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           KL  LP  IG  L +L++L ++ N +   P+ +  L  L+ L
Sbjct: 363 KLTTLPQEIG-NLQSLESLDLSDNPLTSFPEEIGKLQHLKWL 403



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 3/97 (3%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +   L N+  LD+++N+L  LP  IG L  L+ LD++ N L +LP+ I N +SLE 
Sbjct: 321 IPKEI-GNLQNLQTLDLNNNKLTTLPKEIGNLQNLQTLDLNNNKLTTLPQEIGNLQSLES 379

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ 98
           L+ + N L   P+ IG +L +LK L +  N   +LPQ
Sbjct: 380 LDLSDNPLTSFPEEIG-KLQHLKWLRLE-NIPTLLPQ 414



 Score = 43.9 bits (102), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 18/99 (18%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L H T +RVLD                  L++     +   L TLP  IG L SL 
Sbjct: 130 LTEALQHPTDVRVLD------------------LQIREGENSNDPLTTLPKEIGKLQSLQ 171

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           EL +  N++TT+P     L+ LQ+LSL  N L + P ++
Sbjct: 172 ELILGKNQLTTIPKEFWQLQYLQRLSLSFNQLTAIPKEI 210


>gi|421090943|ref|ZP_15551732.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410000270|gb|EKO50915.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 376

 Score =  114 bits (285), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 84/226 (37%), Positives = 130/226 (57%), Gaps = 10/226 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L N+  L++ +NQL  LPN IG L  LK LD+  N L +LP  I   + L++
Sbjct: 153 IPKEI-GQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQD 211

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+L  LP+ IG +L NL+ L +  N++ ILP  +  L +L+ L  R N L +L +
Sbjct: 212 LYLSTNRLTTLPNEIG-QLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSK 270

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           D+E L NL+ L++  N   L T P  I  L +L  LD+  N++TTLP+ I  L+ LQ L 
Sbjct: 271 DIEQLQNLKSLDLWNN--QLTTFPKEIEQLKNLQVLDLGSNQLTTLPEEIEQLKNLQVLD 328

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
           L  N L + P ++ +  L  ++ YL    NN+  S ++K  + KL+
Sbjct: 329 LGSNQLTTIPKEIGQ--LQNLQLYL----NNNQLSSEEKERIRKLL 368



 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/184 (39%), Positives = 110/184 (59%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++ +N+ K LP  IG L  L+ L+++ N L  LPK I   ++L +LN + N+  
Sbjct: 46  LDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFT 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  +  +L NLK LS+  N++  LP  +  L +LRVL    N  K++P+++  L NL+
Sbjct: 106 ILPKEVE-KLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQ 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+  N   L  LP  IG L +L  LD+  N++TTLP+ IG L+KLQ L L  N L + 
Sbjct: 165 TLNLGNN--QLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTL 222

Query: 191 PMDV 194
           P ++
Sbjct: 223 PNEI 226



 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L+++ NQL  LP  IG L  L+ L++  N    LPK +E   +L+EL+   N
Sbjct: 66  GKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTILPKEVEKLENLKELSLGSN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+ L +  N+   +P+ +  L +L+ L+   N L +LP ++  L 
Sbjct: 126 RLTTLPNEIG-QLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQ 184

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++  N   L TLP  IG L  L +L +S N++TTLP+ IG L+ LQ+L L  N L
Sbjct: 185 NLKSLDLGSN--RLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQELYLGSNQL 242

Query: 188 VSPPMDV 194
              P ++
Sbjct: 243 TILPNEI 249



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 104/186 (55%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L + SN+L  LPN IG L  L+VL ++ N  +++PK I   ++L+ LN   N+
Sbjct: 113 KLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQ 172

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP+ IG +L NLK+L +  N++  LP  +  L  L+ L    N L +LP ++  L N
Sbjct: 173 LTALPNEIG-QLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQN 231

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +  N   L  LP  IG L +L  L +  N++TTL   I  L+ L+ L L  N L 
Sbjct: 232 LQELYLGSN--QLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLT 289

Query: 189 SPPMDV 194
           + P ++
Sbjct: 290 TFPKEI 295


>gi|418730457|ref|ZP_13288951.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774666|gb|EKR54670.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 265

 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 118/186 (63%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ +LD+  NQ K +P  I  L  L++LD+  N  +++PK I   ++L+ LN + N+
Sbjct: 71  QLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQ 130

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG +  NL+ L+++ N+++ LP+ +  L +L+VL+   N LK+LP+ +E L N
Sbjct: 131 LTTLPKEIGKQ-ENLQVLNLSSNQLITLPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKN 189

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +  N+  L TLP  IG L SL EL + +N+I TLPD I  L+ L+KL+L  NP+ 
Sbjct: 190 LQTLYL--NYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQNLRKLTLYENPI- 246

Query: 189 SPPMDV 194
            PP ++
Sbjct: 247 -PPQEL 251



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 59/102 (57%), Gaps = 2/102 (1%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R+L      L +LP+ +E L NL++L++  N    +T+P  I  L +L 
Sbjct: 42  LTEALQNSLDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYN--QFKTVPKEIEQLKNLQ 99

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQ 197
            LD+ YN+  T+P  IG L+ LQ L+L  N L + P ++ +Q
Sbjct: 100 MLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKQ 141



 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L E L+N +++ +L +S+  Q L TLP  I  L +L  LD+ YN+  T+P  I  L+ 
Sbjct: 40  RDLTEALQNSLDVRILILSE--QKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKN 97

Query: 177 LQKLSLEGNPLVSPPMDV 194
           LQ L L  N   + P  +
Sbjct: 98  LQMLDLCYNQFKTVPKKI 115


>gi|418720608|ref|ZP_13279804.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410742882|gb|EKQ91627.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
          Length = 265

 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 75/183 (40%), Positives = 112/183 (61%), Gaps = 3/183 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L +  N+ K LP  IG L  L +LD+  N  ++LPK I N + L+ L+ + N
Sbjct: 73  GELQNLDGLKLRYNKFKTLPKEIGNLQNLGLLDLEKNKFKTLPKEIWNLQKLQVLDLSHN 132

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL+ LP  IG EL NL+ L+++ N+++ LP+ +  L +LR LD   N L +LP+++ NL 
Sbjct: 133 KLKTLPKEIG-ELQNLRYLNLSDNQLMTLPKEIGELQNLRYLDLSGNQLMTLPKEIWNLQ 191

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L ++ N   L TLP  IG L +L EL +S N++ TLP  I  L+ L++L L GN L
Sbjct: 192 NLQELYLNGN--QLMTLPKEIGELQNLQELHLSGNQLMTLPKEIWNLQNLRELHLSGNQL 249

Query: 188 VSP 190
           + P
Sbjct: 250 MIP 252



 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 103/177 (58%), Gaps = 7/177 (3%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN  + L N I      + L ++GN L++LPK I   ++L+ L   +NK + LP  IG  
Sbjct: 43  SNLAEALQNPIDV----RALYLNGNELKTLPKEIGELQNLDGLKLRYNKFKTLPKEIG-N 97

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL  L +  NK   LP+ + +L  L+VLD   N LK+LP+++  L NL  LN+S N  
Sbjct: 98  LQNLGLLDLEKNKFKTLPKEIWNLQKLQVLDLSHNKLKTLPKEIGELQNLRYLNLSDN-- 155

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
            L TLP  IG L +L  LD+S N++ TLP  I  L+ LQ+L L GN L++ P ++ E
Sbjct: 156 QLMTLPKEIGELQNLRYLDLSGNQLMTLPKEIWNLQNLQELYLNGNQLMTLPKEIGE 212



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 108/184 (58%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           ++V  L ++ N+LK LP  IG L  L  L +  N  ++LPK I N ++L  L+   NK +
Sbjct: 53  IDVRALYLNGNELKTLPKEIGELQNLDGLKLRYNKFKTLPKEIGNLQNLGLLDLEKNKFK 112

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  I + L  L+ L ++ NK+  LP+ +  L +LR L+   N L +LP+++  L NL 
Sbjct: 113 TLPKEI-WNLQKLQVLDLSHNKLKTLPKEIGELQNLRYLNLSDNQLMTLPKEIGELQNLR 171

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++S N   L TLP  I  L +L EL ++ N++ TLP  IG L+ LQ+L L GN L++ 
Sbjct: 172 YLDLSGN--QLMTLPKEIWNLQNLQELYLNGNQLMTLPKEIGELQNLQELHLSGNQLMTL 229

Query: 191 PMDV 194
           P ++
Sbjct: 230 PKEI 233



 Score = 77.0 bits (188), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 52/125 (41%), Positives = 76/125 (60%), Gaps = 2/125 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L++  NQL  LP  IG L  L+ LD+SGN L +LPK I N ++L+EL  N N
Sbjct: 142 GELQNLRYLNLSDNQLMTLPKEIGELQNLRYLDLSGNQLMTLPKEIWNLQNLQELYLNGN 201

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG EL NL+ L ++ N+++ LP+ + +L +LR L    N L  +P+++ N  
Sbjct: 202 QLMTLPKEIG-ELQNLQELHLSGNQLMTLPKEIWNLQNLRELHLSGNQL-MIPKEIWNSK 259

Query: 128 NLEVL 132
            L VL
Sbjct: 260 KLRVL 264


>gi|427735457|ref|YP_007055001.1| hypothetical protein Riv7116_1913 [Rivularia sp. PCC 7116]
 gi|427370498|gb|AFY54454.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 955

 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 118/204 (57%), Gaps = 4/204 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  +  LD+++NQL  LP  IG L+KL+ LD+  N L SLP  I     L+ L+   N
Sbjct: 165 GQLTKLQTLDLYNNQLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTKLQTLDLYNN 224

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L ++ NK+  LP  +  LT+L+ L    N L SLP ++  L 
Sbjct: 225 QLSSLPAEIG-QLTNLQFLHLSHNKLSSLPAEIVQLTNLQFLHLSHNKLSSLPAEIVQLT 283

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNP 186
           NL+ L++S N   L +LP  IG L  L  L++  N++ +LP  IG L   L++L L+ N 
Sbjct: 284 NLQSLDLSHN--KLSSLPAEIGQLTKLQFLNLKGNQLNSLPTEIGHLYSCLRELKLDSNL 341

Query: 187 LVSPPMDVVEQGLSAVKGYLSEKM 210
           L SPP +++ +G  A+  +  +++
Sbjct: 342 LESPPPEILSKGTKAILNFYKQQL 365



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/189 (39%), Positives = 107/189 (56%), Gaps = 3/189 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  +  L++  N+L  LP  IG L+KL+ LD+S N L SLP  I     L+ LN + N
Sbjct: 96  GQLAKLQSLNLSHNRLSSLPAEIGQLTKLQSLDLSFNQLSSLPAEIGQLAKLQSLNLSHN 155

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L  L+TL +  N++  LP  +  LT L+ LD   N L SLP ++  L 
Sbjct: 156 RLSSLPAEIG-QLTKLQTLDLYNNQLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLT 214

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L++  N   L +LP  IG L +L  L +S+NK+++LP  I  L  LQ L L  N L
Sbjct: 215 KLQTLDLYNN--QLSSLPAEIGQLTNLQFLHLSHNKLSSLPAEIVQLTNLQFLHLSHNKL 272

Query: 188 VSPPMDVVE 196
            S P ++V+
Sbjct: 273 SSLPAEIVQ 281



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 103/176 (58%), Gaps = 3/176 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  LP  IG L+KL+ L++S N L SLP  I     L+ L+ +FN+L  LP  IG +L
Sbjct: 86  NKLSSLPAEIGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQSLDLSFNQLSSLPAEIG-QL 144

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
             L++L+++ N++  LP  +  LT L+ LD   N L SLP ++  L  L+ L++  N   
Sbjct: 145 AKLQSLNLSHNRLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTKLQTLDLYNN--Q 202

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           L +LP  IG L  L  LD+  N++++LP  IG L  LQ L L  N L S P ++V+
Sbjct: 203 LSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTNLQFLHLSHNKLSSLPAEIVQ 258



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 103/193 (53%), Gaps = 17/193 (8%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLK--------------VLDVSGNLLESLPKTIENCRSLEE 61
           LD+  N+L  LP  IG L++LK              ++   GN L  LP+ I     LEE
Sbjct: 21  LDLSGNELTVLPPEIGKLTQLKRLILGKYRYDDKGRIVGTIGNKLSKLPREIGLLAQLEE 80

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
            +   NKL  LP  IG +L  L++L+++ N++  LP  +  LT L+ LD   N L SLP 
Sbjct: 81  FHIVRNKLSSLPAEIG-QLAKLQSLNLSHNRLSSLPAEIGQLTKLQSLDLSFNQLSSLPA 139

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L  L+ LN+S N   L +LP  IG L  L  LD+  N++++LP  IG L KLQ L 
Sbjct: 140 EIGQLAKLQSLNLSHN--RLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTKLQTLD 197

Query: 182 LEGNPLVSPPMDV 194
           L  N L S P ++
Sbjct: 198 LYNNQLSSLPAEI 210



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/175 (37%), Positives = 96/175 (54%), Gaps = 3/175 (1%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
            N+L  LP  IG L++L+   +  N L SLP  I     L+ LN + N+L  LP  IG +
Sbjct: 62  GNKLSKLPREIGLLAQLEEFHIVRNKLSSLPAEIGQLAKLQSLNLSHNRLSSLPAEIG-Q 120

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L  L++L ++ N++  LP  +  L  L+ L+   N L SLP ++  L  L+ L++  N  
Sbjct: 121 LTKLQSLDLSFNQLSSLPAEIGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQTLDLYNN-- 178

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L +LP  IG L  L  LD+  N++++LP  IG L KLQ L L  N L S P ++
Sbjct: 179 QLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEI 233


>gi|421094655|ref|ZP_15555371.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410362717|gb|EKP13754.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|456891510|gb|EMG02221.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 422

 Score =  113 bits (283), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 79/187 (42%), Positives = 115/187 (61%), Gaps = 4/187 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  NQLK LP  IG L  L  L+++ N L +LPK I N ++L EL    N
Sbjct: 175 GQLQNLRELNLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINN 234

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +    +  LP  + +L SLR L+   N + +LP+D+  L 
Sbjct: 235 ELTTLPKEIG-KLKNLQVLYLGA-LLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQ 292

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+VL +S+N   L TLP  IG L +L ELD+S N+ITTLP  IG L+ L++L+L GN +
Sbjct: 293 NLQVLYLSEN--QLATLPKEIGQLQNLRELDLSGNQITTLPKDIGELQSLRELNLSGNQI 350

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 351 TTLPKEI 357



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 78/187 (41%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L + SNQLK LP  IG L K++ L +S N L +LPK I   + L EL+   N
Sbjct: 60  GELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNN 119

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP  IG +L NL+ L +  N++  LP+ +  L +LR L    N LK+LP+D+  L 
Sbjct: 120 LLTTLPKDIG-QLQNLRELYLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLPKDIGQLQ 178

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  LN+  N   L+TLP  IG L +L EL+++ N +TTLP  IG L+ L +L L  N L
Sbjct: 179 NLRELNLDGN--QLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNEL 236

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 237 TTLPKEI 243



 Score =  110 bits (274), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 79/187 (42%), Positives = 113/187 (60%), Gaps = 4/187 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  +  L + +NQL  LP  IG L KL+ LD++ NLL +LPK I   ++L EL    N
Sbjct: 83  GKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNNLLTTLPKDIGQLQNLRELYLTNN 142

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG +L NL+ L ++ N++  LP+ +  L +LR L+   N LK+LP+D+  L 
Sbjct: 143 QLKTLPKDIG-QLQNLRELYLDNNQLKTLPKDIGQLQNLRELNLDGNQLKTLPKDIGKLQ 201

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  LN++ N   L TLP  IG L +L EL +  N++TTLP  IG L+ LQ L L G  L
Sbjct: 202 NLTELNLTNN--PLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNLQVLYL-GALL 258

Query: 188 VSPPMDV 194
            + P D+
Sbjct: 259 TTLPNDI 265



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/183 (39%), Positives = 107/183 (58%), Gaps = 5/183 (2%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V +L +H+N+   LP  IG L  L  L +S N L++LPK I   + +E L+ + N+L  
Sbjct: 43  DVRILSLHNNE--TLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTT 100

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L  L+ L +  N +  LP+ +  L +LR L    N LK+LP+D+  L NL  
Sbjct: 101 LPKDIG-KLKKLRELDLTNNLLTTLPKDIGQLQNLRELYLTNNQLKTLPKDIGQLQNLRE 159

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N   L+TLP  IG L +L EL++  N++ TLP  IG L+ L +L+L  NPL + P
Sbjct: 160 LYLDNN--QLKTLPKDIGQLQNLRELNLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLP 217

Query: 192 MDV 194
            D+
Sbjct: 218 KDI 220



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 76/189 (40%), Positives = 109/189 (57%), Gaps = 4/189 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + +NQLK LP  IG L  L+ L++ GN L++LPK I   ++L ELN   N
Sbjct: 152 GQLQNLRELYLDNNQLKTLPKDIGQLQNLRELNLDGNQLKTLPKDIGKLQNLTELNLTNN 211

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP  IG  L NL  L +  N++  LP+ +  L +L+VL      L +LP D+  L 
Sbjct: 212 PLTTLPKDIG-NLKNLGELLLINNELTTLPKEIGKLKNLQVLYLGA-LLTTLPNDIGYLK 269

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  LN+S N   + TLP  IG L +L  L +S N++ TLP  IG L+ L++L L GN +
Sbjct: 270 SLRELNLSGN--QITTLPKDIGQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGNQI 327

Query: 188 VSPPMDVVE 196
            + P D+ E
Sbjct: 328 TTLPKDIGE 336



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/167 (42%), Positives = 102/167 (61%), Gaps = 4/167 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  LP  IG L  L+VL + G LL +LP  I   +SL ELN + N++  LP  IG +
Sbjct: 233 NNELTTLPKEIGKLKNLQVLYL-GALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIG-Q 290

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+ L ++ N++  LP+ +  L +LR LD   N + +LP+D+  L +L  LN+S N  
Sbjct: 291 LQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGNQITTLPKDIGELQSLRELNLSGN-- 348

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
            + TLP  IG L SL EL++  N+ITT+P  IG L+ LQ L L+  P
Sbjct: 349 QITTLPKEIGKLQSLRELNLGGNQITTIPKEIGHLKNLQVLYLDDIP 395



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 65/102 (63%), Gaps = 1/102 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL +  NQL  LP  IG L  L+ LD+SGN + +LPK I   +SL ELN + N
Sbjct: 289 GQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGNQITTLPKDIGELQSLRELNLSGN 348

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           ++  LP  IG +L +L+ L++  N+I  +P+ + HL +L+VL
Sbjct: 349 QITTLPKEIG-KLQSLRELNLGGNQITTIPKEIGHLKNLQVL 389



 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 4/77 (5%)

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
           +L E L+N  ++ +L++  N    ETLP  IG L +L EL +S N++ TLP  IG L+K+
Sbjct: 33  NLTEALQNPTDVRILSLHNN----ETLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKI 88

Query: 178 QKLSLEGNPLVSPPMDV 194
           ++LSL  N L + P D+
Sbjct: 89  ERLSLSNNQLTTLPKDI 105


>gi|254424572|ref|ZP_05038290.1| Miro-like protein [Synechococcus sp. PCC 7335]
 gi|196192061|gb|EDX87025.1| Miro-like protein [Synechococcus sp. PCC 7335]
          Length = 1260

 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/192 (39%), Positives = 115/192 (59%), Gaps = 4/192 (2%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L++ SNQL  LP  +G L  L  LD+S N L +LP+ +   +SL  L+ +FN+L  LP+ 
Sbjct: 167 LNLRSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLSFNQLSTLPEV 226

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           +G +L +L +L+++ N++  LP+ +  L SL  LD   N L +LPE +  L +L  L + 
Sbjct: 227 VG-QLQSLTSLNLSSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLR 285

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            N   L TLP ++G L SL  LD+S N+++TLP+ +G L+ L  L+L  N L + P +VV
Sbjct: 286 SN--QLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLNLRSNQLSTLP-EVV 342

Query: 196 EQGLSAVKGYLS 207
            Q  S    YLS
Sbjct: 343 GQLQSLTSLYLS 354



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/195 (37%), Positives = 112/195 (57%), Gaps = 4/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L ++  L + SNQL  LP ++G L  L  LD+S N L +LP+ +   +SL  
Sbjct: 407 LPE-VVGQLQSLTSLYLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTS 465

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N+L  LP+ +G +L +L +L ++ N++  LP+ +  L SL  LD R N L +LPE
Sbjct: 466 LNLRSNQLSTLPEAVG-QLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLRSNQLSTLPE 524

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L++S N   L TLP  +G L SL  L +  N+++TLP+ IG L+ L  L 
Sbjct: 525 VVGQLQSLTSLDLSSN--QLSTLPEVVGQLQSLTSLYLRSNQLSTLPEVIGQLQSLTSLD 582

Query: 182 LEGNPLVSPPMDVVE 196
           L  N L   P  + +
Sbjct: 583 LSDNQLSELPRQICQ 597



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 113/193 (58%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L ++  LD+ SNQL  LP  +G L  L  LD+S N L +LP+ +   +SL  
Sbjct: 177 LPE-VVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLSFNQLSTLPEVVGQLQSLTS 235

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N+L  LP+ +G +L +L +L ++ N++  LP+ +  L SL  L  R N L +LPE
Sbjct: 236 LNLSSNQLSTLPEVVG-QLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPE 294

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L++S N   L TLP  +G L SL  L++  N+++TLP+ +G L+ L  L 
Sbjct: 295 AVGQLQSLTSLDLSSN--QLSTLPEVVGQLQSLTSLNLRSNQLSTLPEVVGQLQSLTSLY 352

Query: 182 LEGNPLVSPPMDV 194
           L  N L + P  V
Sbjct: 353 LSSNQLSTLPEAV 365



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/193 (36%), Positives = 114/193 (59%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE++  +L ++  LD+ SNQL  LP  +G L  L  L++  N L +LP+ +   +SL  
Sbjct: 292 LPEAV-GQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLNLRSNQLSTLPEVVGQLQSLTS 350

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+L  LP+ +G +L +L +L+++ N++  LP+ +  L SL  LD   N L +LPE
Sbjct: 351 LYLSSNQLSTLPEAVG-QLQSLTSLNLSSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPE 409

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L +  N   L TLP ++G L SL  LD+S N+++TLP+ +G L+ L  L+
Sbjct: 410 VVGQLQSLTSLYLRSN--QLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLN 467

Query: 182 LEGNPLVSPPMDV 194
           L  N L + P  V
Sbjct: 468 LRSNQLSTLPEAV 480



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/196 (37%), Positives = 116/196 (59%), Gaps = 5/196 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L ++  L++ SNQL  LP  +G L  L  L +S N L +LP+ +   +SL  
Sbjct: 315 LPE-VVGQLQSLTSLNLRSNQLSTLPEVVGQLQSLTSLYLSSNQLSTLPEAVGQLQSLTS 373

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N+L  LP+ +G +L +L +L ++ N++  LP+ +  L SL  L  R N L +LPE
Sbjct: 374 LNLSSNQLSTLPEVVG-QLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPE 432

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L++S N   L TLP  +G L SL  L++  N+++TLP+++G L+ L  L 
Sbjct: 433 AVGQLQSLTSLDLSSN--QLSTLPEVVGQLQSLTSLNLRSNQLSTLPEAVGQLQSLTSLD 490

Query: 182 LEGNPLVSPPMDVVEQ 197
           L  N L + P +VV Q
Sbjct: 491 LSSNQLSTLP-EVVGQ 505



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 76/205 (37%), Positives = 116/205 (56%), Gaps = 6/205 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE +  RL  +  L++ SNQL  LP  +G L  L  L +  N L +LP+ +   +SL  
Sbjct: 86  IPE-VVGRLRKLRSLNLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEVVGQLQSLTS 144

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L  LP+ +G +  +L +L++  N++  LP+ +  L SL  LD   N L +LPE
Sbjct: 145 LDLSSNQLSTLPEVVGQQ--SLTSLNLRSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPE 202

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L++S  F  L TLP  +G L SL  L++S N+++TLP+ +G L+ L  L 
Sbjct: 203 VVGQLQSLTSLDLS--FNQLSTLPEVVGQLQSLTSLNLSSNQLSTLPEVVGQLQSLTSLD 260

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYL 206
           L  N L + P +VV Q  S    YL
Sbjct: 261 LSSNQLSTLP-EVVGQLQSLTSLYL 284



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 112/190 (58%), Gaps = 5/190 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL  +  L +  NQ + +P  +G L KL+ L++S N L +LP+ +   +SL  L    N
Sbjct: 68  GRLTELRSLFLAYNQFEEIPEVVGRLRKLRSLNLSSNQLSTLPEVVGQLQSLTSLYLRSN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ +G +L +L +L ++ N++  LP+ +    SL  L+ R N L +LPE +  L 
Sbjct: 128 QLSTLPEVVG-QLQSLTSLDLSSNQLSTLPEVVGQ-QSLTSLNLRSNQLSTLPEVVGQLQ 185

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  L++S N   L TLP  +G L SL  LD+S+N+++TLP+ +G L+ L  L+L  N L
Sbjct: 186 SLTSLDLSSN--QLSTLPEVVGQLQSLTSLDLSFNQLSTLPEVVGQLQSLTSLNLSSNQL 243

Query: 188 VSPPMDVVEQ 197
            + P +VV Q
Sbjct: 244 STLP-EVVGQ 252



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 103/177 (58%), Gaps = 5/177 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N L+ LP+ IG L++L+ L ++ N  E +P+ +   R L  LN + N+L  LP+ +G +L
Sbjct: 58  NNLQTLPDEIGRLTELRSLFLAYNQFEEIPEVVGRLRKLRSLNLSSNQLSTLPEVVG-QL 116

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            +L +L +  N++  LP+ +  L SL  LD   N L +LPE +    +L  LN+  N   
Sbjct: 117 QSLTSLYLRSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPE-VVGQQSLTSLNLRSN--Q 173

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQ 197
           L TLP  +G L SL  LD+S N+++TLP+ +G L+ L  L L  N L + P +VV Q
Sbjct: 174 LSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLSFNQLSTLP-EVVGQ 229



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 90/192 (46%), Gaps = 32/192 (16%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L ++  L + SNQL  LP  IG L  L  LD+S N L  LP+ I    +L  
Sbjct: 545 LPE-VVGQLQSLTSLYLRSNQLSTLPEVIGQLQSLTSLDLSDNQLSELPRQICQLDTLCS 603

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDA--RLNCLKSL 119
           L    N L QLP  +   L++L+ LS+    ++    S  H   LR   A  + N L  +
Sbjct: 604 LFLGGNFLEQLPAELS-RLLHLEKLSLGSASLIF--DSYYH-NVLRAFGASKQGNKLTHI 659

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
            + L +L +LEV                         LD+S+N+++ +   I  L KL++
Sbjct: 660 SDCLFSLPSLEV-------------------------LDLSFNQLSRVDSKIQSLEKLKQ 694

Query: 180 LSLEGNPLVSPP 191
           + L GNPL  PP
Sbjct: 695 IDLRGNPLPIPP 706


>gi|124009683|ref|ZP_01694354.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123984287|gb|EAY24631.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 373

 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 112/193 (58%), Gaps = 3/193 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L ++ NQLK LP +IG   +L+ L ++ N L +LP++I     L EL A+ N+L +LP +
Sbjct: 184 LYINHNQLKTLPKNIGQCGQLQKLYLAHNQLTTLPESIGQLTQLNELKASHNRLAELPKS 243

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG ++  L  L +  N+++ LP+S+  L  L  L    N L  LPE + ++  L  L++S
Sbjct: 244 IG-QITGLYNLRLEYNQLIQLPKSIGQLNWLYHLHIDHNQLTELPESIGHMNWLYYLHVS 302

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            N   L+TLP SIG L  L  L+VS+N++TTLP SIG LR+L+ L L GN +    +  +
Sbjct: 303 HN--QLDTLPESIGQLAQLQVLEVSHNRLTTLPKSIGRLRQLKSLGLTGNNIAPAELQRI 360

Query: 196 EQGLSAVKGYLSE 208
           +  L     Y  E
Sbjct: 361 KSWLPHCDIYFDE 373



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 99/208 (47%), Gaps = 28/208 (13%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           LN   L +   QL  LP  IG L++L+ +D   N L SLP++I   + L++L    N+L 
Sbjct: 64  LNTEDLKLPKYQLAHLPKQIGELAQLQSIDACNNFLTSLPESIGQLKQLKKLYLQDNQLS 123

Query: 71  QLPDTIG------------------------FELINLKTLSINCNKIVILPQSLTHLTSL 106
            LP +                          FE   L  LS+N NK   L +++   T L
Sbjct: 124 DLPKSFAQLLQLTLLNLDQNSFSDLPSGIQSFEC--LLELSLNHNKFTQLAENIVQFTQL 181

Query: 107 RVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITT 166
           + L    N LK+LP+++     L+ L ++ N   L TLP SIG L  L EL  S+N++  
Sbjct: 182 QKLYINHNQLKTLPKNIGQCGQLQKLYLAHN--QLTTLPESIGQLTQLNELKASHNRLAE 239

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           LP SIG +  L  L LE N L+  P  +
Sbjct: 240 LPKSIGQITGLYNLRLEYNQLIQLPKSI 267



 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 3/131 (2%)

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG EL  L+++    N +  LP+S+  L  L+ L  + N L  LP+    L+
Sbjct: 75  QLAHLPKQIG-ELAQLQSIDACNNFLTSLPESIGQLKQLKKLYLQDNQLSDLPKSFAQLL 133

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L +LN+ QN      LP  I     L+EL +++NK T L ++I    +LQKL +  N L
Sbjct: 134 QLTLLNLDQN--SFSDLPSGIQSFECLLELSLNHNKFTQLAENIVQFTQLQKLYINHNQL 191

Query: 188 VSPPMDVVEQG 198
            + P ++ + G
Sbjct: 192 KTLPKNIGQCG 202


>gi|294828114|ref|NP_712633.2| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074469|ref|YP_005988786.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|293385961|gb|AAN49651.2| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458258|gb|AER02803.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 265

 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/186 (39%), Positives = 118/186 (63%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ +LD+  NQ K +P  I  L  L++LD+  N  +++PK I   ++L+ LN + N+
Sbjct: 71  QLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQ 130

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG +L NL+ L+++ N+++  P+ +  L +L+VL+   N LK+LP+ +E L N
Sbjct: 131 LTTLPKEIG-KLENLQVLNLSSNQLITFPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKN 189

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +  N+  L TLP  IG L SL +L + +N+I TLPD I  L+ L+KL+L  NP+ 
Sbjct: 190 LQTLYL--NYNQLTTLPREIGRLQSLTKLHLQHNQIATLPDEIIQLQNLRKLTLYENPI- 246

Query: 189 SPPMDV 194
            PP ++
Sbjct: 247 -PPQEL 251



 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/196 (35%), Positives = 120/196 (61%), Gaps = 4/196 (2%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V +L +   +L  LP  I  L  L++LD+  N  +++PK IE  ++L+ L+  +N+ +
Sbjct: 50  LDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYNQFK 109

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            +P  IG +L NL+ L+++ N++  LP+ +  L +L+VL+   N L + P+++  L NL+
Sbjct: 110 TVPKKIG-QLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQLITFPKEIGKLENLQ 168

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
           VLN+  N   L+TLP  I  L +L  L ++YN++TTLP  IG L+ L KL L+ N + + 
Sbjct: 169 VLNLGSN--RLKTLPKGIEQLKNLQTLYLNYNQLTTLPREIGRLQSLTKLHLQHNQIATL 226

Query: 191 PMDVVE-QGLSAVKGY 205
           P ++++ Q L  +  Y
Sbjct: 227 PDEIIQLQNLRKLTLY 242



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/130 (39%), Positives = 78/130 (60%), Gaps = 1/130 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL++ SNQL  LP  IG L  L+VL++S N L + PK I    +L+ LN   N
Sbjct: 116 GQLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQLITFPKEIGKLENLQVLNLGSN 175

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  I  +L NL+TL +N N++  LP+ +  L SL  L  + N + +LP+++  L 
Sbjct: 176 RLKTLPKGIE-QLKNLQTLYLNYNQLTTLPREIGRLQSLTKLHLQHNQIATLPDEIIQLQ 234

Query: 128 NLEVLNISQN 137
           NL  L + +N
Sbjct: 235 NLRKLTLYEN 244



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R+L      L +LP+ +E L NL++L++  N    +T+P  I  L +L 
Sbjct: 42  LTEALQNSLDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYN--QFKTVPKEIEQLKNLQ 99

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LD+ YN+  T+P  IG L+ LQ L+L  N L + P ++
Sbjct: 100 MLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEI 138



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L E L+N +++ +L +S+  Q L TLP  I  L +L  LD+ YN+  T+P  I  L+ 
Sbjct: 40  RDLTEALQNSLDVRILILSE--QKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKN 97

Query: 177 LQKLSLEGNPLVSPPMDV 194
           LQ L L  N   + P  +
Sbjct: 98  LQMLDLCYNQFKTVPKKI 115


>gi|417783638|ref|ZP_12431356.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409953262|gb|EKO07763.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 289

 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 118/186 (63%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ +LD+  NQ K +P  I  L  L++LD+  N  +++PK I   ++L+ LN + N+
Sbjct: 95  QLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQ 154

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG +L NL+ L+++ N+++ LP+ +    +L+VL+   N LK+LP+ +E L N
Sbjct: 155 LTTLPKEIG-KLENLQVLNLSSNQLITLPKEIGKPENLQVLNLGSNRLKTLPKGIEQLKN 213

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +  N+  L TLP  IG L SL EL + +N+I TLPD I  L+ L+KL+L  NP+ 
Sbjct: 214 LQTLYL--NYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQNLRKLTLYENPI- 270

Query: 189 SPPMDV 194
            PP ++
Sbjct: 271 -PPQEL 275



 Score = 77.0 bits (188), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 52/130 (40%), Positives = 79/130 (60%), Gaps = 1/130 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL++ SNQL  LP  IG L  L+VL++S N L +LPK I    +L+ LN   N
Sbjct: 140 GQLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQLITLPKEIGKPENLQVLNLGSN 199

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  I  +L NL+TL +N N++  LP+ +  L SL  L  + N + +LP+++  L 
Sbjct: 200 RLKTLPKGIE-QLKNLQTLYLNYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQ 258

Query: 128 NLEVLNISQN 137
           NL  L + +N
Sbjct: 259 NLRKLTLYEN 268



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R+L      L +LP+ +E L NL++L++  N    +T+P  I  L +L 
Sbjct: 66  LTEALQNSLDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYN--QFKTVPKEIEQLKNLQ 123

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LD+ YN+  T+P  IG L+ LQ L+L  N L + P ++
Sbjct: 124 MLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEI 162



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L E L+N +++ +L +S+  Q L TLP  I  L +L  LD+ YN+  T+P  I  L+ 
Sbjct: 64  RDLTEALQNSLDVRILILSE--QKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKN 121

Query: 177 LQKLSLEGNPLVSPPMDV 194
           LQ L L  N   + P  +
Sbjct: 122 LQMLDLCYNQFKTVPKKI 139


>gi|418706465|ref|ZP_13267313.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410764090|gb|EKR34809.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 267

 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/184 (41%), Positives = 109/184 (59%), Gaps = 3/184 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L+N+  L++  N+L  LP  IG L  LK+LD++ N + + PK     ++LE L  N N
Sbjct: 68  GQLVNLERLNLRDNKLTNLPEEIGELENLKILDITRNKISTFPKEFWKLKNLEVLLLNGN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP+ IG EL NLK L I  NKI   P+    L +L VL    N L +LPE++  L 
Sbjct: 128 SLSNLPEEIG-ELENLKILDITRNKISTFPKEFWKLKNLEVLLLNGNSLSNLPEEIGELE 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L +L ++ N   L TLP  IG L +LV L +S NK+T++PD +G L+KL+ L+L  NP 
Sbjct: 187 KLGILYLNNN--QLTTLPKEIGQLENLVSLSLSSNKLTSIPDELGQLKKLRILNLWDNPT 244

Query: 188 VSPP 191
           ++ P
Sbjct: 245 LTTP 248



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/163 (34%), Positives = 81/163 (49%), Gaps = 26/163 (15%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           +++++LD+S     +LPK I    +LE LN   NKL  LP+ IG EL NLK L I  NKI
Sbjct: 48  NEVRILDLSRKQRTTLPKEIGQLVNLERLNLRDNKLTNLPEEIG-ELENLKILDITRNKI 106

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
              P+    L +L VL    N L +LPE++  L NL++L                     
Sbjct: 107 STFPKEFWKLKNLEVLLLNGNSLSNLPEEIGELENLKIL--------------------- 145

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
               D++ NKI+T P     L+ L+ L L GN L + P ++ E
Sbjct: 146 ----DITRNKISTFPKEFWKLKNLEVLLLNGNSLSNLPEEIGE 184



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 65/120 (54%), Gaps = 2/120 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +   L N+ +LD+  N++   P     L  L+VL ++GN L +LP+ I     L  
Sbjct: 132 LPEEI-GELENLKILDITRNKISTFPKEFWKLKNLEVLLLNGNSLSNLPEEIGELEKLGI 190

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  N N+L  LP  IG +L NL +LS++ NK+  +P  L  L  LR+L+   N   + PE
Sbjct: 191 LYLNNNQLTTLPKEIG-QLENLVSLSLSSNKLTSIPDELGQLKKLRILNLWDNPTLTTPE 249


>gi|418666318|ref|ZP_13227747.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410757932|gb|EKR19533.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 313

 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 110/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQ   LP  IG L KL+VL+++GN   SLPK I   ++LE L+   N
Sbjct: 60  GQLQNLERLDLDGNQFTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGN 119

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP  IG +L  L+ L+++ N+  I P+ +    SL+ L    + LK+LP+++  L 
Sbjct: 120 QFTFLPKEIG-QLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQ 178

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++  N   L +LP  IG L +L EL++  NK+ TLP  I  L+ LQ L L+GN L
Sbjct: 179 NLQSLHLDGN--QLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQSLHLDGNQL 236

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 237 TSLPKEI 243



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 99/183 (54%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L++  NQL  LP  IG L  L+VL+++GN   SLPK I   ++LE L+ + N+   
Sbjct: 18  NLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTS 77

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L  L+ L++  N+   LP+ +  L +L  LD   N    LP+++  L  LE 
Sbjct: 78  LPKEIG-QLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTFLPKEIGQLQKLEA 136

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LN+  N       P  I    SL  L +S +++ TLP  I  L+ LQ L L+GN L S P
Sbjct: 137 LNLDHN--RFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLTSLP 194

Query: 192 MDV 194
            ++
Sbjct: 195 KEI 197



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 103/178 (57%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQ   LP  IG L KL+ L++  N     PK I   +SL+ L  + +
Sbjct: 106 GQLQNLERLDLAGNQFTFLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGD 165

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  I   L NL++L ++ N++  LP+ +  L +L  L+ + N LK+LP+++E L 
Sbjct: 166 QLKTLPKEILL-LQNLQSLHLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQ 224

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ L++  N   L +LP  IG L +L EL++  NK+ TLP  I  L+ LQ L L  N
Sbjct: 225 NLQSLHLDGN--QLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSN 280



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/152 (38%), Positives = 90/152 (59%), Gaps = 3/152 (1%)

Query: 46  LESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTS 105
           LESLP+ I   ++LE+LN + N+L  LP  IG +L NL+ L++  N+   LP+ +  L +
Sbjct: 6   LESLPRVIGLFQNLEKLNLDGNQLTSLPKEIG-QLQNLRVLNLAGNQFTSLPKEIGQLQN 64

Query: 106 LRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
           L  LD   N   SLP+++  L  L VLN++ N     +LP  IG L +L  LD++ N+ T
Sbjct: 65  LERLDLDGNQFTSLPKEIGQLQKLRVLNLAGN--QFTSLPKEIGQLQNLERLDLAGNQFT 122

Query: 166 TLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQ 197
            LP  IG L+KL+ L+L+ N     P ++ +Q
Sbjct: 123 FLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQ 154



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 2/82 (2%)

Query: 113 LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
           L+ L+SLP  +    NLE LN+  N   L +LP  IG L +L  L+++ N+ T+LP  IG
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGN--QLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60

Query: 173 CLRKLQKLSLEGNPLVSPPMDV 194
            L+ L++L L+GN   S P ++
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEI 82


>gi|71991531|ref|NP_001023851.1| Protein LET-413, isoform b [Caenorhabditis elegans]
 gi|76803776|sp|O61967.3|LAP1_CAEEL RecName: Full=Protein lap1; AltName: Full=Lethal protein 413
 gi|351062135|emb|CCD70054.1| Protein LET-413, isoform b [Caenorhabditis elegans]
          Length = 699

 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/182 (40%), Positives = 110/182 (60%), Gaps = 3/182 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L ++ +LDV  N+L  LP  IG L++L  L+++ N +  LP T++NC+ L  LN + N  
Sbjct: 58  LRHLRILDVSDNELAVLPAEIGNLTQLIELNLNRNSIAKLPDTMQNCKLLTTLNLSSNPF 117

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            +LP+TI  E  ++  LS+N   + +LP ++  LT+LRVL+AR N L+++P  +  L  L
Sbjct: 118 TRLPETI-CECSSITILSLNETSLTLLPSNIGSLTNLRVLEARDNLLRTIPLSIVELRKL 176

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           E L++ QN   LE LP  IG L SL E  V  N +T+LPDSI   R L +L +  N ++ 
Sbjct: 177 EELDLGQN--ELEALPAEIGKLTSLREFYVDINSLTSLPDSISGCRMLDQLDVSENQIIR 234

Query: 190 PP 191
            P
Sbjct: 235 LP 236



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 103/179 (57%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  N+L+ LP  IG L+ L+   V  N L SLP +I  CR L++L+ + N++ +LP+ 
Sbjct: 179 LDLGQNELEALPAEIGKLTSLREFYVDINSLTSLPDSISGCRMLDQLDVSENQIIRLPEN 238

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           +G  + NL  L+I+ N+I+ LP S   L  L++L A  N L +L  ++    +L  L + 
Sbjct: 239 LG-RMPNLTDLNISINEIIELPSSFGELKRLQMLKADRNSLHNLTSEIGKCQSLTELYLG 297

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           QNF  L  LP +IG L  L  L+V  N ++ +PD+IG  + L  LSL  N L   PM +
Sbjct: 298 QNF--LTDLPDTIGDLRQLTTLNVDCNNLSDIPDTIGNCKSLTVLSLRQNILTELPMTI 354



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 4/166 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE+L  R+ N+  L++  N++  LP+S G L +L++L    N L +L   I  C+SL E
Sbjct: 235 LPENL-GRMPNLTDLNISINEIIELPSSFGELKRLQMLKADRNSLHNLTSEIGKCQSLTE 293

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N L  LPDTIG +L  L TL+++CN +  +P ++ +  SL VL  R N L  LP 
Sbjct: 294 LYLGQNFLTDLPDTIG-DLRQLTTLNVDCNNLSDIPDTIGNCKSLTVLSLRQNILTELPM 352

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
            +    NL VL+++ N   L  LP+++ +L  L  L +S N+  ++
Sbjct: 353 TIGKCENLTVLDVASN--KLPHLPFTVKVLYKLQALWLSENQTQSI 396



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 92/172 (53%), Gaps = 5/172 (2%)

Query: 25  CLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLK 84
           CLP  + C  ++  +D S + L+++P  I   R LE+LN   N +++L D   F L +L+
Sbjct: 6   CLP--MACQRQVDSIDRSQSNLQAIPSDIFRFRKLEDLNLTMNNIKEL-DHRLFSLRHLR 62

Query: 85  TLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
            L ++ N++ +LP  + +LT L  L+   N +  LP+ ++N   L  LN+S N      L
Sbjct: 63  ILDVSDNELAVLPAEIGNLTQLIELNLNRNSIAKLPDTMQNCKLLTTLNLSSN--PFTRL 120

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           P +I    S+  L ++   +T LP +IG L  L+ L    N L + P+ +VE
Sbjct: 121 PETICECSSITILSLNETSLTLLPSNIGSLTNLRVLEARDNLLRTIPLSIVE 172



 Score = 43.9 bits (102), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 6/106 (5%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+++   L  +  L+V  N L  +P++IG    L VL +  N+L  LP TI  C +L  
Sbjct: 304 LPDTI-GDLRQLTTLNVDCNNLSDIPDTIGNCKSLTVLSLRQNILTELPMTIGKCENLTV 362

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
           L+   NKL  LP T+   L  L+ L ++ N+     QS+  L+  R
Sbjct: 363 LDVASNKLPHLPFTVKV-LYKLQALWLSENQT----QSILKLSETR 403


>gi|302807825|ref|XP_002985606.1| hypothetical protein SELMODRAFT_122877 [Selaginella moellendorffii]
 gi|300146515|gb|EFJ13184.1| hypothetical protein SELMODRAFT_122877 [Selaginella moellendorffii]
          Length = 208

 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 107/187 (57%), Gaps = 27/187 (14%)

Query: 26  LPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELINLK 84
           LP+    L KL+VL+VSGN+L+SLP+++  N   L+ L+   NKL+ LP++IG ++ +L 
Sbjct: 2   LPDYFDSLPKLRVLNVSGNMLKSLPRSLGPNLPRLKRLHLQLNKLKALPESIG-KMASLV 60

Query: 85  TLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
            L +  NK+V LP ++  L SL+ LDA  N   S+P+                       
Sbjct: 61  HLEVQFNKLVSLPPTIGDLKSLQTLDASGNFSTSVPD----------------------- 97

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKG 204
             SIG   SL  LD+SYN+I  LP S+G L +LQ+L L  NPLV PP++V E    AV  
Sbjct: 98  --SIGYASSLTYLDLSYNQIARLPLSVGNLTQLQELKLFHNPLVVPPLEVAEHSTKAVVE 155

Query: 205 YLSEKMN 211
           Y+S+++ 
Sbjct: 156 YMSQELQ 162



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/139 (37%), Positives = 76/139 (54%), Gaps = 2/139 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P SL   L  +  L +  N+LK LP SIG ++ L  L+V  N L SLP TI + +SL+ 
Sbjct: 25  LPRSLGPNLPRLKRLHLQLNKLKALPESIGKMASLVHLEVQFNKLVSLPPTIGDLKSLQT 84

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP- 120
           L+A+ N    +PD+IG+   +L  L ++ N+I  LP S+ +LT L+ L    N L   P 
Sbjct: 85  LDASGNFSTSVPDSIGYA-SSLTYLDLSYNQIARLPLSVGNLTQLQELKLFHNPLVVPPL 143

Query: 121 EDLENLINLEVLNISQNFQ 139
           E  E+     V  +SQ  Q
Sbjct: 144 EVAEHSTKAVVEYMSQELQ 162


>gi|398341375|ref|ZP_10526078.1| hypothetical protein LkirsB1_19650 [Leptospira kirschneri serovar
           Bim str. 1051]
          Length = 374

 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/226 (37%), Positives = 129/226 (57%), Gaps = 10/226 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L N+  L++ +NQL  LPN IG L  LK LD+  N L +LP  I   + L++
Sbjct: 151 IPKEI-GQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQD 209

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+L  LP+ IG +L NL+ L +  N++ ILP  +  L +L+ L  R N L +L +
Sbjct: 210 LYLSTNRLTTLPNEIG-QLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSK 268

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           D+E L NL+ L++  N   L T P  I  L +L  LD+  N++TTLP+ I  L+ LQ L 
Sbjct: 269 DIEQLQNLKSLDLWNN--QLTTFPKEIEQLKNLQVLDLGSNQLTTLPEEIEQLKNLQVLD 326

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
           L  N L + P  + +  L  ++ YL    NN+  S ++K  + KL+
Sbjct: 327 LGSNQLTTLPEGIGQ--LQNLQLYL----NNNQLSSEEKERIRKLL 366



 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/184 (39%), Positives = 110/184 (59%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++ +N+ K LP  IG L  L+ L+++ N L  LPK I   ++L +LN + N+  
Sbjct: 44  LDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFT 103

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  +  +L NLK LS+  N++  LP  +  L +LRVL    N  K++P+++  L NL+
Sbjct: 104 ILPKEVE-KLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQ 162

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+  N   L  LP  IG L +L  LD+  N++TTLP+ IG L+KLQ L L  N L + 
Sbjct: 163 TLNLGNN--QLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTL 220

Query: 191 PMDV 194
           P ++
Sbjct: 221 PNEI 224



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L+++ NQL  LP  IG L  L+ L++  N    LPK +E   +L+EL+   N
Sbjct: 64  GKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTILPKEVEKLENLKELSLGSN 123

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+ L +  N+   +P+ +  L +L+ L+   N L +LP ++  L 
Sbjct: 124 RLTTLPNEIG-QLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQ 182

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++  N   L TLP  IG L  L +L +S N++TTLP+ IG L+ LQ L L  N L
Sbjct: 183 NLKSLDLGSN--RLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQDLYLGSNQL 240

Query: 188 VSPPMDV 194
              P ++
Sbjct: 241 TILPNEI 247



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 104/186 (55%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L + SN+L  LPN IG L  L+VL ++ N  +++PK I   ++L+ LN   N+
Sbjct: 111 KLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQ 170

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP+ IG +L NLK+L +  N++  LP  +  L  L+ L    N L +LP ++  L N
Sbjct: 171 LTALPNEIG-QLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQN 229

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +  N   L  LP  IG L +L  L +  N++TTL   I  L+ L+ L L  N L 
Sbjct: 230 LQDLYLGSN--QLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLT 287

Query: 189 SPPMDV 194
           + P ++
Sbjct: 288 TFPKEI 293


>gi|418672956|ref|ZP_13234286.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|410580063|gb|EKQ47894.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 266

 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/184 (38%), Positives = 116/184 (63%), Gaps = 5/184 (2%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V +L +   +L  LP  I  L  L++LD+  N  +++PK IE  ++L+ L+  +N+ +
Sbjct: 74  LDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKKIEQLKNLQMLDLCYNQFK 133

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            +P  IG +L NL+ L+++ N++  LP+ +  L +L+VL+   N LK+LP+ +E L NL+
Sbjct: 134 TVPKKIG-QLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQ 192

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +  N+  L TLP  IG L SL EL + +N+I TLPD I  L+ L+KL+L  NP+  P
Sbjct: 193 TLYL--NYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQNLRKLTLYENPI--P 248

Query: 191 PMDV 194
           P ++
Sbjct: 249 PQEL 252



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 78/129 (60%), Gaps = 1/129 (0%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ +LD+  NQ K +P  IG L  L+VL++S N L +LPK I    +L+ LN   N+
Sbjct: 118 QLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLGSNR 177

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L+ LP  I  +L NL+TL +N N++  LP+ +  L SL  L  + N + +LP+++  L N
Sbjct: 178 LKTLPKGIE-QLKNLQTLYLNYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQN 236

Query: 129 LEVLNISQN 137
           L  L + +N
Sbjct: 237 LRKLTLYEN 245



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 62/102 (60%), Gaps = 1/102 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL++ SNQL  LP  IG L  L+VL++  N L++LPK IE  ++L+ L  N+N
Sbjct: 140 GQLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYN 199

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           +L  LP  IG  L +L  L +  N+I  LP  +  L +LR L
Sbjct: 200 QLTTLPREIG-RLQSLTELHLQHNQIATLPDEIIQLQNLRKL 240



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R+L      L +LP+ +E L NL++L++  N    +T+P  I  L +L 
Sbjct: 66  LTEALQNSLDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYN--QFKTVPKKIEQLKNLQ 123

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LD+ YN+  T+P  IG L+ LQ L+L  N L + P ++
Sbjct: 124 MLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEI 162



 Score = 40.4 bits (93), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L E L+N +++ +L +S+  Q L TLP  I  L +L  LD+ YN+  T+P  I  L+ 
Sbjct: 64  RDLTEALQNSLDVRILILSE--QKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKKIEQLKN 121

Query: 177 LQKLSLEGNPLVSPPMDV 194
           LQ L L  N   + P  +
Sbjct: 122 LQMLDLCYNQFKTVPKKI 139


>gi|421092130|ref|ZP_15552886.1| leucine rich repeat protein, partial [Leptospira kirschneri str.
           200802841]
 gi|409999073|gb|EKO49773.1| leucine rich repeat protein, partial [Leptospira kirschneri str.
           200802841]
          Length = 364

 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/184 (39%), Positives = 110/184 (59%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++ +N+ K LP  IG L  L+ L+++ N L  LPK I   ++L +LN + N+  
Sbjct: 46  LDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFT 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  +  +L NLK LS+  N++  LP  +  L +LRVL    N  K++P+++  L NL+
Sbjct: 106 ILPKEVE-KLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQ 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+  N   L  LP  IG L +L  LD+  N++TTLP+ IG L+KLQ L L  N L + 
Sbjct: 165 TLNLGNN--QLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTL 222

Query: 191 PMDV 194
           P ++
Sbjct: 223 PNEI 226



 Score =  112 bits (279), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 112/193 (58%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L N+  L++ +NQL  LPN IG L  LK LD+  N L +LP  I   + L++
Sbjct: 153 IPKEI-GQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQD 211

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+L  LP+ IG +L NL+ L +  N++ ILP  +  L +L+ L  R N L +L +
Sbjct: 212 LYLSTNRLTTLPNEIG-QLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSK 270

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           D+E L NL+ L++  N   L T P  I  L +L  LD+  N++TTLP  IG L+ LQ   
Sbjct: 271 DIEQLQNLKSLDLWNN--QLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFE 328

Query: 182 LEGNPLVSPPMDV 194
           L  N L + P ++
Sbjct: 329 LNNNQLTTLPKEI 341



 Score =  110 bits (274), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 75/182 (41%), Positives = 111/182 (60%), Gaps = 3/182 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+ SN+L  LPN IG L KL+ L +S N L +LP  I   ++L+EL    N
Sbjct: 181 GQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQELYLGSN 240

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+TL +  N++  L + +  L +L+ LD   N L + P+++E L 
Sbjct: 241 QLTILPNEIG-QLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLK 299

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+VL++  N   L TLP  IG L +L   +++ N++TTLP  IG L+ LQ+L L  N L
Sbjct: 300 NLQVLDLGSN--QLTTLPKEIGQLKNLQVFELNNNQLTTLPKEIGQLQNLQELYLIDNQL 357

Query: 188 VS 189
            S
Sbjct: 358 SS 359



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L+++ NQL  LP  IG L  L+ L++  N    LPK +E   +L+EL+   N
Sbjct: 66  GKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTILPKEVEKLENLKELSLGSN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+ L +  N+   +P+ +  L +L+ L+   N L +LP ++  L 
Sbjct: 126 RLTTLPNEIG-QLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQ 184

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++  N   L TLP  IG L  L +L +S N++TTLP+ IG L+ LQ+L L  N L
Sbjct: 185 NLKSLDLGSN--RLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQELYLGSNQL 242

Query: 188 VSPPMDV 194
              P ++
Sbjct: 243 TILPNEI 249



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 104/186 (55%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L + SN+L  LPN IG L  L+VL ++ N  +++PK I   ++L+ LN   N+
Sbjct: 113 KLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQ 172

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP+ IG +L NLK+L +  N++  LP  +  L  L+ L    N L +LP ++  L N
Sbjct: 173 LTALPNEIG-QLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQN 231

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +  N   L  LP  IG L +L  L +  N++TTL   I  L+ L+ L L  N L 
Sbjct: 232 LQELYLGSN--QLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLT 289

Query: 189 SPPMDV 194
           + P ++
Sbjct: 290 TFPKEI 295


>gi|418755366|ref|ZP_13311573.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964377|gb|EKO32267.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 513

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/193 (40%), Positives = 117/193 (60%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L N+  LDV +N L  LPN IG L  LK L++S NLL +LP  I   ++LEE
Sbjct: 191 LPQEI-GQLENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITLPNEIGKLQNLEE 249

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N+L  LP  IG +L  L+ L +  N+++ LPQ +  L  L  L  + N L++LP 
Sbjct: 250 LNLSNNQLITLPQEIG-QLQELEWLHLEHNQLITLPQEIGTLQKLEYLYLKNNHLETLPN 308

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L+ L++  N   L TLP  IG L +L  LDVS N + TLP+ IG L  L++L+
Sbjct: 309 EIGKLRSLKRLHLEHN--QLITLPQEIGTLQNLPSLDVSNNHLVTLPNEIGKLLSLKRLN 366

Query: 182 LEGNPLVSPPMDV 194
           LE N L + P ++
Sbjct: 367 LENNQLTTLPKEI 379



 Score =  110 bits (274), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 76/187 (40%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  NQL  LP  IG L  L+ LDVS N L +LP  I   RSL+ LN + N
Sbjct: 173 GKLQNLEQLYLEDNQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNN 232

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP+ IG +L NL+ L+++ N+++ LPQ +  L  L  L    N L +LP+++  L 
Sbjct: 233 LLITLPNEIG-KLQNLEELNLSNNQLITLPQEIGQLQELEWLHLEHNQLITLPQEIGTLQ 291

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L +  N  +LETLP  IG L SL  L + +N++ TLP  IG L+ L  L +  N L
Sbjct: 292 KLEYLYLKNN--HLETLPNEIGKLRSLKRLHLEHNQLITLPQEIGTLQNLPSLDVSNNHL 349

Query: 188 VSPPMDV 194
           V+ P ++
Sbjct: 350 VTLPNEI 356



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/207 (37%), Positives = 113/207 (54%), Gaps = 26/207 (12%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           ++V +L +  NQL  LPN IG L KL+ L++S N L +LP  I   ++LEEL+   N+L 
Sbjct: 38  MDVRILYLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGRLQNLEELDLFHNRLT 97

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSL-------------THLTSLRVLDARL---- 113
             P+ I   L  LK L +  N++V LP+ +              HL +L     RL    
Sbjct: 98  TFPNEI-VRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLKNNHLATLPSEIGRLQRLK 156

Query: 114 ------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
                 N L +LP+++  L NLE L +  N   L TLP  IG L +L +LDVS N +TTL
Sbjct: 157 RLYLYNNHLMTLPKEIGKLQNLEQLYLEDN--QLTTLPQEIGQLENLQDLDVSNNHLTTL 214

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ IG LR L++L+L  N L++ P ++
Sbjct: 215 PNEIGKLRSLKRLNLSNNLLITLPNEI 241



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 107/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  LD+  N+L   PN I  L +LK L ++ N L +LPK I   + L+ L    N
Sbjct: 81  GRLQNLEELDLFHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLKNN 140

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP  IG  L  LK L +  N ++ LP+ +  L +L  L    N L +LP+++  L 
Sbjct: 141 HLATLPSEIG-RLQRLKRLYLYNNHLMTLPKEIGKLQNLEQLYLEDNQLTTLPQEIGQLE 199

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++S N  +L TLP  IG L SL  L++S N + TLP+ IG L+ L++L+L  N L
Sbjct: 200 NLQDLDVSNN--HLTTLPNEIGKLRSLKRLNLSNNLLITLPNEIGKLQNLEELNLSNNQL 257

Query: 188 VSPPMDV 194
           ++ P ++
Sbjct: 258 ITLPQEI 264



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 73/188 (38%), Positives = 104/188 (55%), Gaps = 3/188 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  NQL  LP  IG L  L  LDVS N L +LP  I    SL+ LN   N+L  LP  
Sbjct: 319 LHLEHNQLITLPQEIGTLQNLPSLDVSNNHLVTLPNEIGKLLSLKRLNLENNQLTTLPKE 378

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL  L+++ N++  LP  +  L +L+ L+   N LK+LP ++  L NL+ LN+ 
Sbjct: 379 IG-KLQNLPNLNLSNNQLATLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLE 437

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            N   L+TLP  IG L +L  L++  N++ TLP  I  L+ LQ L L+  P +    + +
Sbjct: 438 NN--QLKTLPNEIGRLQNLKVLNLGGNQLVTLPQEIVGLKHLQILKLKNIPALLSEKETI 495

Query: 196 EQGLSAVK 203
            + L  VK
Sbjct: 496 RKLLPDVK 503



 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 59/97 (60%), Gaps = 2/97 (2%)

Query: 98  QSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVEL 157
           ++L +   +R+L    N L +LP ++  L  LE LN+S N   L TLP  IG L +L EL
Sbjct: 32  EALKNPMDVRILYLSDNQLATLPNEIGKLRKLEWLNLSNN--RLTTLPNEIGRLQNLEEL 89

Query: 158 DVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           D+ +N++TT P+ I  L++L+ L L  N LV+ P ++
Sbjct: 90  DLFHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPKEI 126



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 78/128 (60%), Gaps = 1/128 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +LL++  L++ +NQL  LP  IG L  L  L++S N L +LP  I    +L+ LN   N
Sbjct: 357 GKLLSLKRLNLENNQLTTLPKEIGKLQNLPNLNLSNNQLATLPNEIGQLENLQYLNLENN 416

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP+ IG +L NL+ L++  N++  LP  +  L +L+VL+   N L +LP+++  L 
Sbjct: 417 QLKTLPNEIG-QLENLQYLNLENNQLKTLPNEIGRLQNLKVLNLGGNQLVTLPQEIVGLK 475

Query: 128 NLEVLNIS 135
           +L++L + 
Sbjct: 476 HLQILKLK 483



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 110 DARLN-CLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           DA  N   +   E L+N +++ +L +S N   L TLP  IG L  L  L++S N++TTLP
Sbjct: 20  DAEKNKVYRDFNEALKNPMDVRILYLSDN--QLATLPNEIGKLRKLEWLNLSNNRLTTLP 77

Query: 169 DSIGCLRKLQKLSLEGNPLVSPPMDVV 195
           + IG L+ L++L L  N L + P ++V
Sbjct: 78  NEIGRLQNLEELDLFHNRLTTFPNEIV 104


>gi|359464519|ref|ZP_09253082.1| Miro domain-containing protein, partial [Acaryochloris sp. CCMEE
           5410]
          Length = 289

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/177 (41%), Positives = 102/177 (57%), Gaps = 4/177 (2%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  N+LK LP + G L KL  LD++ N   SLPKT+    +L  LN N NKL +LP  
Sbjct: 113 LYLSQNELKSLPKNFGQLKKLTYLDLTSNHFVSLPKTLGQLINLTHLNLNSNKLTRLPKE 172

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           +G +L+NL +L++  N++V LP+ L  LT L  L+   N L SLP+ +  LINL  L + 
Sbjct: 173 LG-QLVNLNSLNVAGNQLVCLPEILVQLTKLNSLNCAGNGLTSLPKGISQLINLTELGLG 231

Query: 136 QNFQ---YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
             F       +LP   G L +L  LD+S N++T+LP+  G L  L +L L GN L S
Sbjct: 232 STFSERNRFTSLPEEFGQLTNLTRLDLSGNQLTSLPEEFGQLTNLTRLDLSGNQLTS 288



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 106/195 (54%), Gaps = 4/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE    +L ++  LD+    L+ LP S+G L+KL  LD+S N L +LP  ++    L  
Sbjct: 31  LPEEF-GQLTSLSSLDLRRTHLESLPKSLGQLTKLTYLDLSNNNLGTLPAELDQLTYLTY 89

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N L +L    G +L +L  L ++ N++  LP++   L  L  LD   N   SLP+
Sbjct: 90  LDLSDNSLTELTKRFG-QLSSLNQLYLSQNELKSLPKNFGQLKKLTYLDLTSNHFVSLPK 148

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L  LINL  LN++ N   L  LP  +G L++L  L+V+ N++  LP+ +  L KL  L+
Sbjct: 149 TLGQLINLTHLNLNSN--KLTRLPKELGQLVNLNSLNVAGNQLVCLPEILVQLTKLNSLN 206

Query: 182 LEGNPLVSPPMDVVE 196
             GN L S P  + +
Sbjct: 207 CAGNGLTSLPKGISQ 221



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 97/181 (53%), Gaps = 3/181 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+   +L  LP   G L+ L  LD+    LESLPK++     L  L+ + N L  LP  
Sbjct: 21  LDLGGERLDSLPEEFGQLTSLSSLDLRRTHLESLPKSLGQLTKLTYLDLSNNNLGTLPAE 80

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           +  +L  L  L ++ N +  L +    L+SL  L    N LKSLP++   L  L  L+++
Sbjct: 81  LD-QLTYLTYLDLSDNSLTELTKRFGQLSSLNQLYLSQNELKSLPKNFGQLKKLTYLDLT 139

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            N  +  +LP ++G L++L  L+++ NK+T LP  +G L  L  L++ GN LV  P  +V
Sbjct: 140 SN--HFVSLPKTLGQLINLTHLNLNSNKLTRLPKELGQLVNLNSLNVAGNQLVCLPEILV 197

Query: 196 E 196
           +
Sbjct: 198 Q 198



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 76/141 (53%), Gaps = 7/141 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P++L  +L+N+  L+++SN+L  LP  +G L  L  L+V+GN L  LP+ +     L  
Sbjct: 146 LPKTL-GQLINLTHLNLNSNKLTRLPKELGQLVNLNSLNVAGNQLVCLPEILVQLTKLNS 204

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINC-----NKIVILPQSLTHLTSLRVLDARLNCL 116
           LN   N L  LP  I  +LINL  L +       N+   LP+    LT+L  LD   N L
Sbjct: 205 LNCAGNGLTSLPKGIS-QLINLTELGLGSTFSERNRFTSLPEEFGQLTNLTRLDLSGNQL 263

Query: 117 KSLPEDLENLINLEVLNISQN 137
            SLPE+   L NL  L++S N
Sbjct: 264 TSLPEEFGQLTNLTRLDLSGN 284



 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 1/48 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESL 49
           +PE    +L N+  LD+  NQL  LP   G L+ L  LD+SGN L SL
Sbjct: 243 LPEEF-GQLTNLTRLDLSGNQLTSLPEEFGQLTNLTRLDLSGNQLTSL 289


>gi|73669795|ref|YP_305810.1| leucine-rich repeat-containing protein [Methanosarcina barkeri str.
           Fusaro]
 gi|72396957|gb|AAZ71230.1| leucine-rich-repeat protein [Methanosarcina barkeri str. Fusaro]
          Length = 863

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/208 (38%), Positives = 117/208 (56%), Gaps = 12/208 (5%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++L N+  LD+  NQL  LP+ I  L  L  L +S N L SLP  I   ++L++L+ + N
Sbjct: 105 SKLKNLKQLDISENQLTSLPSGITELKDLTQLSISKNQLTSLPPEISKLKNLKQLSISRN 164

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  EL +L  ++I  N++  LP  ++ L SL  L    N L SLP ++ NL 
Sbjct: 165 QLTSLPPEI-LELKSLTQINIYENQLTSLPHEISELKSLTQLSISGNQLTSLPSEIANLE 223

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI---------GCLRKLQ 178
           +L  L+IS+N   L +LP  I  L +L +LD+S NK+T+LP  I         G     +
Sbjct: 224 SLTQLDISRN--QLTSLPLEITELKNLTQLDISSNKLTSLPPEILKLGIDIEWGNNSAEK 281

Query: 179 KLSLEGNPLVSPPMDVVEQGLSAVKGYL 206
            + LEGNPL  PP+++V+QG  AV  Y 
Sbjct: 282 GIFLEGNPLEKPPIEIVKQGREAVINYF 309



 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 105/188 (55%), Gaps = 3/188 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           + L N   L +  NQL  LP  I  L  LK LD+S N L SLP  I   ++L +LN   N
Sbjct: 36  SELKNFTKLYISYNQLTSLPPEISELKNLKQLDISYNQLTSLPPDISKLKNLTQLNIRNN 95

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NLK L I+ N++  LP  +T L  L  L    N L SLP ++  L 
Sbjct: 96  QLTSLPPGIS-KLKNLKQLDISENQLTSLPSGITELKDLTQLSISKNQLTSLPPEISKLK 154

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L+IS+N   L +LP  I  L SL ++++  N++T+LP  I  L+ L +LS+ GN L
Sbjct: 155 NLKQLSISRN--QLTSLPPEILELKSLTQINIYENQLTSLPHEISELKSLTQLSISGNQL 212

Query: 188 VSPPMDVV 195
            S P ++ 
Sbjct: 213 TSLPSEIA 220



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 95/163 (58%), Gaps = 3/163 (1%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           +K+  L +S   L SLP  I   ++  +L  ++N+L  LP  I  EL NLK L I+ N++
Sbjct: 16  NKVTALRLSYKNLTSLPPEISELKNFTKLYISYNQLTSLPPEIS-ELKNLKQLDISYNQL 74

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
             LP  ++ L +L  L+ R N L SLP  +  L NL+ L+IS+N   L +LP  I  L  
Sbjct: 75  TSLPPDISKLKNLTQLNIRNNQLTSLPPGISKLKNLKQLDISEN--QLTSLPSGITELKD 132

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           L +L +S N++T+LP  I  L+ L++LS+  N L S P +++E
Sbjct: 133 LTQLSISKNQLTSLPPEISKLKNLKQLSISRNQLTSLPPEILE 175



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 101/184 (54%), Gaps = 3/184 (1%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           V  L +    L  LP  I  L     L +S N L SLP  I   ++L++L+ ++N+L  L
Sbjct: 18  VTALRLSYKNLTSLPPEISELKNFTKLYISYNQLTSLPPEISELKNLKQLDISYNQLTSL 77

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P  I  +L NL  L+I  N++  LP  ++ L +L+ LD   N L SLP  +  L +L  L
Sbjct: 78  PPDIS-KLKNLTQLNIRNNQLTSLPPGISKLKNLKQLDISENQLTSLPSGITELKDLTQL 136

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
           +IS+N   L +LP  I  L +L +L +S N++T+LP  I  L+ L ++++  N L S P 
Sbjct: 137 SISKN--QLTSLPPEISKLKNLKQLSISRNQLTSLPPEILELKSLTQINIYENQLTSLPH 194

Query: 193 DVVE 196
           ++ E
Sbjct: 195 EISE 198


>gi|421094569|ref|ZP_15555285.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410362631|gb|EKP13668.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
          Length = 379

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/172 (42%), Positives = 108/172 (62%), Gaps = 3/172 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           VLD++ NQL  LP  IG L  L+ L +  N L++LP  I   ++L+ L+   N+L+ LP 
Sbjct: 184 VLDLNGNQLTTLPKEIGELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPK 243

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            IG EL NL+ L +  N++  LP+ +  L +L VLD  +N LK+LP+++  L NL VL++
Sbjct: 244 EIG-ELQNLQELYLYTNQLKTLPKEIGELQNLTVLDLHINELKTLPKEIGELQNLTVLDL 302

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
             N   L+TLP  IG L SL  LD+  N++ TLP+ IG L++L+KL L+  P
Sbjct: 303 RNN--ELKTLPKEIGELQSLTVLDLRNNELKTLPNEIGKLKELRKLHLDDIP 352



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/189 (39%), Positives = 108/189 (57%), Gaps = 3/189 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  NQL  LPN IG L KL+ L +  N L++L K I   + L+ L+ N N
Sbjct: 131 GQLQNLRELHLSVNQLTTLPNDIGKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNGN 190

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG EL NL+ L +  N++  LP  +  L +L+VL    N LK+LP+++  L 
Sbjct: 191 QLTTLPKEIG-ELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEIGELQ 249

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +  N   L+TLP  IG L +L  LD+  N++ TLP  IG L+ L  L L  N L
Sbjct: 250 NLQELYLYTN--QLKTLPKEIGELQNLTVLDLHINELKTLPKEIGELQNLTVLDLRNNEL 307

Query: 188 VSPPMDVVE 196
            + P ++ E
Sbjct: 308 KTLPKEIGE 316



 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 112/189 (59%), Gaps = 3/189 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+ +L+++ NQL  LPN IG L  L++L++  N   +LP  I   ++L+EL+ +FN
Sbjct: 62  GELQNLRILNLYRNQLTTLPNEIGKLQNLQLLNLDKNQFTALPNDIGKLKNLQELHLSFN 121

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L   P+ IG +L NL+ L ++ N++  LP  +  L  L  L    N LK+L +++  L 
Sbjct: 122 QLTTFPNDIG-QLQNLRELHLSVNQLTTLPNDIGKLQKLERLSLIENQLKTLSKEIGYLK 180

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+VL+++ N   L TLP  IG L +L EL +  N++ TLP+ IG L+ LQ L +  N L
Sbjct: 181 ELQVLDLNGN--QLTTLPKEIGELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQL 238

Query: 188 VSPPMDVVE 196
            + P ++ E
Sbjct: 239 KTLPKEIGE 247



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 111/190 (58%), Gaps = 4/190 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
            NQ   LPN IG L  L+ L +S N L + P  I   ++L EL+ + N+L  LP+ IG +
Sbjct: 97  KNQFTALPNDIGKLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPNDIG-K 155

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L  L+ LS+  N++  L + + +L  L+VLD   N L +LP+++  L NL  L++ +N  
Sbjct: 156 LQKLERLSLIENQLKTLSKEIGYLKELQVLDLNGNQLTTLPKEIGELKNLRELHLYKN-- 213

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
            L+TLP  IG L +L  L +  N++ TLP  IG L+ LQ+L L  N L + P ++ E Q 
Sbjct: 214 QLKTLPNDIGELKNLQVLHIGSNQLKTLPKEIGELQNLQELYLYTNQLKTLPKEIGELQN 273

Query: 199 LSAVKGYLSE 208
           L+ +  +++E
Sbjct: 274 LTVLDLHINE 283



 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 109/185 (58%), Gaps = 3/185 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V +LD+ + +L  LP  IG L  L++L++  N L +LP  I   ++L+ LN + N+   
Sbjct: 43  DVRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEIGKLQNLQLLNLDKNQFTA 102

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ IG +L NL+ L ++ N++   P  +  L +LR L   +N L +LP D+  L  LE 
Sbjct: 103 LPNDIG-KLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPNDIGKLQKLER 161

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L++ +N   L+TL   IG L  L  LD++ N++TTLP  IG L+ L++L L  N L + P
Sbjct: 162 LSLIEN--QLKTLSKEIGYLKELQVLDLNGNQLTTLPKEIGELKNLRELHLYKNQLKTLP 219

Query: 192 MDVVE 196
            D+ E
Sbjct: 220 NDIGE 224



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 44/70 (62%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+ VLD+H N+LK LP  IG L  L VLD+  N L++LPK I   +SL  L+   N
Sbjct: 269 GELQNLTVLDLHINELKTLPKEIGELQNLTVLDLRNNELKTLPKEIGELQSLTVLDLRNN 328

Query: 68  KLRQLPDTIG 77
           +L+ LP+ IG
Sbjct: 329 ELKTLPNEIG 338


>gi|417762588|ref|ZP_12410577.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|409941581|gb|EKN87209.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
          Length = 242

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/184 (38%), Positives = 116/184 (63%), Gaps = 5/184 (2%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V +L +   +L  LP  I  L  L++LD+  N  +++PK IE  ++L+ L+  +N+ +
Sbjct: 50  LDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKKIEQLKNLQMLDLCYNQFK 109

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            +P  IG +L NL+ L+++ N++  LP+ +  L +L+VL+   N LK+LP+ +E L NL+
Sbjct: 110 TVPKKIG-QLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQ 168

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +  N+  L TLP  IG L SL EL + +N+I TLPD I  L+ L+KL+L  NP+  P
Sbjct: 169 TLYL--NYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQNLRKLTLYENPI--P 224

Query: 191 PMDV 194
           P ++
Sbjct: 225 PQEL 228



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 78/129 (60%), Gaps = 1/129 (0%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ +LD+  NQ K +P  IG L  L+VL++S N L +LPK I    +L+ LN   N+
Sbjct: 94  QLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLGSNR 153

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L+ LP  I  +L NL+TL +N N++  LP+ +  L SL  L  + N + +LP+++  L N
Sbjct: 154 LKTLPKGIE-QLKNLQTLYLNYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQN 212

Query: 129 LEVLNISQN 137
           L  L + +N
Sbjct: 213 LRKLTLYEN 221



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 62/102 (60%), Gaps = 1/102 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL++ SNQL  LP  IG L  L+VL++  N L++LPK IE  ++L+ L  N+N
Sbjct: 116 GQLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYN 175

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           +L  LP  IG  L +L  L +  N+I  LP  +  L +LR L
Sbjct: 176 QLTTLPREIG-RLQSLTELHLQHNQIATLPDEIIQLQNLRKL 216



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R+L      L +LP+ +E L NL++L++  N    +T+P  I  L +L 
Sbjct: 42  LTEALQNSLDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYN--QFKTVPKKIEQLKNLQ 99

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LD+ YN+  T+P  IG L+ LQ L+L  N L + P ++
Sbjct: 100 MLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEI 138



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L E L+N +++ +L +S+  Q L TLP  I  L +L  LD+ YN+  T+P  I  L+ 
Sbjct: 40  RDLTEALQNSLDVRILILSE--QKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKKIEQLKN 97

Query: 177 LQKLSLEGNPLVSPPMDV 194
           LQ L L  N   + P  +
Sbjct: 98  LQMLDLCYNQFKTVPKKI 115


>gi|71991525|ref|NP_001023850.1| Protein LET-413, isoform a [Caenorhabditis elegans]
 gi|7899272|emb|CAB91651.1| LET-413 protein [Caenorhabditis elegans]
 gi|351062134|emb|CCD70053.1| Protein LET-413, isoform a [Caenorhabditis elegans]
          Length = 679

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/182 (40%), Positives = 110/182 (60%), Gaps = 3/182 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L ++ +LDV  N+L  LP  IG L++L  L+++ N +  LP T++NC+ L  LN + N  
Sbjct: 58  LRHLRILDVSDNELAVLPAEIGNLTQLIELNLNRNSIAKLPDTMQNCKLLTTLNLSSNPF 117

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            +LP+TI  E  ++  LS+N   + +LP ++  LT+LRVL+AR N L+++P  +  L  L
Sbjct: 118 TRLPETI-CECSSITILSLNETSLTLLPSNIGSLTNLRVLEARDNLLRTIPLSIVELRKL 176

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           E L++ QN   LE LP  IG L SL E  V  N +T+LPDSI   R L +L +  N ++ 
Sbjct: 177 EELDLGQN--ELEALPAEIGKLTSLREFYVDINSLTSLPDSISGCRMLDQLDVSENQIIR 234

Query: 190 PP 191
            P
Sbjct: 235 LP 236



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 103/179 (57%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  N+L+ LP  IG L+ L+   V  N L SLP +I  CR L++L+ + N++ +LP+ 
Sbjct: 179 LDLGQNELEALPAEIGKLTSLREFYVDINSLTSLPDSISGCRMLDQLDVSENQIIRLPEN 238

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           +G  + NL  L+I+ N+I+ LP S   L  L++L A  N L +L  ++    +L  L + 
Sbjct: 239 LG-RMPNLTDLNISINEIIELPSSFGELKRLQMLKADRNSLHNLTSEIGKCQSLTELYLG 297

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           QNF  L  LP +IG L  L  L+V  N ++ +PD+IG  + L  LSL  N L   PM +
Sbjct: 298 QNF--LTDLPDTIGDLRQLTTLNVDCNNLSDIPDTIGNCKSLTVLSLRQNILTELPMTI 354



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 4/166 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE+L  R+ N+  L++  N++  LP+S G L +L++L    N L +L   I  C+SL E
Sbjct: 235 LPENL-GRMPNLTDLNISINEIIELPSSFGELKRLQMLKADRNSLHNLTSEIGKCQSLTE 293

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N L  LPDTIG +L  L TL+++CN +  +P ++ +  SL VL  R N L  LP 
Sbjct: 294 LYLGQNFLTDLPDTIG-DLRQLTTLNVDCNNLSDIPDTIGNCKSLTVLSLRQNILTELPM 352

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
            +    NL VL+++ N   L  LP+++ +L  L  L +S N+  ++
Sbjct: 353 TIGKCENLTVLDVASN--KLPHLPFTVKVLYKLQALWLSENQTQSI 396



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 92/172 (53%), Gaps = 5/172 (2%)

Query: 25  CLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLK 84
           CLP  + C  ++  +D S + L+++P  I   R LE+LN   N +++L D   F L +L+
Sbjct: 6   CLP--MACQRQVDSIDRSQSNLQAIPSDIFRFRKLEDLNLTMNNIKEL-DHRLFSLRHLR 62

Query: 85  TLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
            L ++ N++ +LP  + +LT L  L+   N +  LP+ ++N   L  LN+S N      L
Sbjct: 63  ILDVSDNELAVLPAEIGNLTQLIELNLNRNSIAKLPDTMQNCKLLTTLNLSSN--PFTRL 120

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           P +I    S+  L ++   +T LP +IG L  L+ L    N L + P+ +VE
Sbjct: 121 PETICECSSITILSLNETSLTLLPSNIGSLTNLRVLEARDNLLRTIPLSIVE 172



 Score = 43.9 bits (102), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 6/106 (5%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+++   L  +  L+V  N L  +P++IG    L VL +  N+L  LP TI  C +L  
Sbjct: 304 LPDTI-GDLRQLTTLNVDCNNLSDIPDTIGNCKSLTVLSLRQNILTELPMTIGKCENLTV 362

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
           L+   NKL  LP T+   L  L+ L ++ N+     QS+  L+  R
Sbjct: 363 LDVASNKLPHLPFTVKV-LYKLQALWLSENQT----QSILKLSETR 403


>gi|169828175|ref|YP_001698333.1| protein lap4 [Lysinibacillus sphaericus C3-41]
 gi|168992663|gb|ACA40203.1| Protein lap4 (Protein scribble) (Protein smell-impaired)
           [Lysinibacillus sphaericus C3-41]
          Length = 289

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/174 (41%), Positives = 103/174 (59%), Gaps = 3/174 (1%)

Query: 19  HSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGF 78
           H+NQL+ +P  IG L+K++ L+VS NLL  LP+ I N   L EL    N+L +LP+ +  
Sbjct: 105 HNNQLQSIPPEIGQLTKVRYLNVSDNLLSELPEEIGNLNKLVELRIMNNRLTELPEGLS- 163

Query: 79  ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNF 138
            L NL+ L +  NKI ILP+ +  L  LRVLD   N L+ +P+ L   + L  LN+  N 
Sbjct: 164 RLTNLRELHLKKNKITILPEKIGELALLRVLDLEDNQLQKMPDSLHKCLTLRRLNVRHN- 222

Query: 139 QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
             L TLP SIG L +L+ELDV  N +  LP+S+  +  L++L L  N  +  P+
Sbjct: 223 -KLSTLPESIGHLKNLLELDVRSNDLKELPESLLAMESLERLDLRWNHELKIPI 275



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/156 (36%), Positives = 93/156 (59%), Gaps = 8/156 (5%)

Query: 46  LESLPKTIEN-CRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLT 104
           L+ LP   E+  + ++ELN   N LR++P  I F++ +++ L+I+ NKI  LP  +T+L 
Sbjct: 15  LKKLPVVEESQIKEIKELNLFDNDLRKIPTEI-FDMTSMEILNISVNKINKLPAEITNLK 73

Query: 105 SLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
           +LR+LDA  N +  +P ++ +L+N+E      N Q L+++P  IG L  +  L+VS N +
Sbjct: 74  NLRMLDAGHNHIDLIPPEIGHLVNMEDYLYFHNNQ-LQSIPPEIGQLTKVRYLNVSDNLL 132

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLS 200
           + LP+ IG L KL +L +  N L   P     +GLS
Sbjct: 133 SELPEEIGNLNKLVELRIMNNRLTELP-----EGLS 163



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/119 (39%), Positives = 68/119 (57%), Gaps = 2/119 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L +RL N+  L +  N++  LP  IG L+ L+VLD+  N L+ +P ++  C +L  
Sbjct: 158 LPEGL-SRLTNLRELHLKKNKITILPEKIGELALLRVLDLEDNQLQKMPDSLHKCLTLRR 216

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           LN   NKL  LP++IG  L NL  L +  N +  LP+SL  + SL  LD R N    +P
Sbjct: 217 LNVRHNKLSTLPESIGH-LKNLLELDVRSNDLKELPESLLAMESLERLDLRWNHELKIP 274



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 27/200 (13%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L++  N L+ +P  I  ++ +++L++S N +  LP  I N ++L  L+A  N +  +P  
Sbjct: 32  LNLFDNDLRKIPTEIFDMTSMEILNISVNKINKLPAEITNLKNLRMLDAGHNHIDLIPPE 91

Query: 76  IGFELINLKT-LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENL-------- 126
           IG  L+N++  L  + N++  +P  +  LT +R L+   N L  LPE++ NL        
Sbjct: 92  IGH-LVNMEDYLYFHNNQLQSIPPEIGQLTKVRYLNVSDNLLSELPEEIGNLNKLVELRI 150

Query: 127 ---------------INLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
                           NL  L++ +N   +  LP  IG L  L  LD+  N++  +PDS+
Sbjct: 151 MNNRLTELPEGLSRLTNLRELHLKKN--KITILPEKIGELALLRVLDLEDNQLQKMPDSL 208

Query: 172 GCLRKLQKLSLEGNPLVSPP 191
                L++L++  N L + P
Sbjct: 209 HKCLTLRRLNVRHNKLSTLP 228


>gi|429962306|gb|ELA41850.1| hypothetical protein VICG_01034, partial [Vittaforma corneae ATCC
           50505]
          Length = 235

 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/191 (41%), Positives = 115/191 (60%), Gaps = 3/191 (1%)

Query: 4   ESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELN 63
           +S   RL+ +  L++ SN+L+ LP  IG L  L+ LD+S N L  LP  I+  +SL+ L 
Sbjct: 29  DSNVKRLVGLQCLNLRSNRLRILPIEIGELWNLQELDLSWNKLRQLPADIKKLKSLQRLY 88

Query: 64  ANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDL 123
            +FNKLR LP  I  EL NL+ L  + N++  LP  + +L +L  L  R N L+SLP+ +
Sbjct: 89  ISFNKLRALPCEI-VELWNLQELYASYNRLESLPVEIGNLKNLTKLYLRSNVLRSLPDGI 147

Query: 124 ENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLE 183
             LI+++ L++S N   L +L   IG L SL EL VSYN++ +LP  IG L+ L KL L 
Sbjct: 148 GELISIQGLDLSWN--KLRSLSAEIGKLKSLQELYVSYNRLESLPVEIGNLKNLTKLFLR 205

Query: 184 GNPLVSPPMDV 194
            N L S P ++
Sbjct: 206 SNVLRSLPDEI 216



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 107/179 (59%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           + + S+ +  + +++  L  L+ L++  N L  LP  I    +L+EL+ ++NKLRQLP  
Sbjct: 18  ISIPSHGITSIDSNVKRLVGLQCLNLRSNRLRILPIEIGELWNLQELDLSWNKLRQLPAD 77

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           I  +L +L+ L I+ NK+  LP  +  L +L+ L A  N L+SLP ++ NL NL  L + 
Sbjct: 78  IK-KLKSLQRLYISFNKLRALPCEIVELWNLQELYASYNRLESLPVEIGNLKNLTKLYLR 136

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L +LP  IG L+S+  LD+S+NK+ +L   IG L+ LQ+L +  N L S P+++
Sbjct: 137 SNV--LRSLPDGIGELISIQGLDLSWNKLRSLSAEIGKLKSLQELYVSYNRLESLPVEI 193



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 6/124 (4%)

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L+ L+ L++  N++ ILP  +  L +L+ LD   N L+ LP D++ L +L+ L IS  F 
Sbjct: 35  LVGLQCLNLRSNRLRILPIEIGELWNLQELDLSWNKLRQLPADIKKLKSLQRLYIS--FN 92

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE--- 196
            L  LP  I  L +L EL  SYN++ +LP  IG L+ L KL L  N L S P  + E   
Sbjct: 93  KLRALPCEIVELWNLQELYASYNRLESLPVEIGNLKNLTKLYLRSNVLRSLPDGIGELIS 152

Query: 197 -QGL 199
            QGL
Sbjct: 153 IQGL 156



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 2/81 (2%)

Query: 116 LKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLR 175
           + S+  +++ L+ L+ LN+  N   L  LP  IG L +L ELD+S+NK+  LP  I  L+
Sbjct: 25  ITSIDSNVKRLVGLQCLNLRSN--RLRILPIEIGELWNLQELDLSWNKLRQLPADIKKLK 82

Query: 176 KLQKLSLEGNPLVSPPMDVVE 196
            LQ+L +  N L + P ++VE
Sbjct: 83  SLQRLYISFNKLRALPCEIVE 103


>gi|398341370|ref|ZP_10526073.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
          Length = 398

 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 111/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  NQLK LP  IG L  L+VL++  N LE+LP  IE  + L+ L  ++N
Sbjct: 64  EQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVLELIHNQLETLPNEIEQLKDLQRLYLSYN 123

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  I  +L NL+ L +  N++  LP  +  L +L+ L    N L +LPE++  L 
Sbjct: 124 QLKTLPKEIR-QLQNLQELYLRDNQLTTLPTEIGQLKNLQRLQLWNNQLMTLPEEIGQLK 182

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+  N   L  LP  IG L +L EL +  N++T LP+ IG L+KLQ+LSL  N L
Sbjct: 183 NLQTLNLGYN--QLTALPNEIGQLQNLQELYLGSNQLTALPNEIGQLQKLQELSLSTNRL 240

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 241 TTLPNEI 247



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/200 (38%), Positives = 116/200 (58%), Gaps = 3/200 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + SNQL  LPN IG L KL+ L +S N L +LP  I   ++L++L    N
Sbjct: 202 GQLQNLQELYLGSNQLTALPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSN 261

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+TL +  N++  L + +  L +L+ LD   N L + P+++E L 
Sbjct: 262 QLTILPNEIG-QLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLK 320

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+VL++  N   L TLP  IG L +L   +++ N++TTLP  IG L+ LQ+L L  N L
Sbjct: 321 NLQVLDLGSN--QLTTLPKEIGQLKNLQVFELNNNQLTTLPKEIGQLQNLQELYLIDNQL 378

Query: 188 VSPPMDVVEQGLSAVKGYLS 207
            S   + + + L   + Y  
Sbjct: 379 SSEEKERIRKLLPKCQIYFE 398



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 111/193 (57%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L N+  L++  NQL  LPN IG L  L+ L +  N L +LP  I   + L+E
Sbjct: 174 LPEEI-GQLKNLQTLNLGYNQLTALPNEIGQLQNLQELYLGSNQLTALPNEIGQLQKLQE 232

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L  LP+ IG +L NL+ L +  N++ ILP  +  L +L+ L  R N L +L +
Sbjct: 233 LSLSTNRLTTLPNEIG-QLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSK 291

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           D+E L NL+ L++  N   L T P  I  L +L  LD+  N++TTLP  IG L+ LQ   
Sbjct: 292 DIEQLQNLKSLDLWNN--QLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFE 349

Query: 182 LEGNPLVSPPMDV 194
           L  N L + P ++
Sbjct: 350 LNNNQLTTLPKEI 362



 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 2/90 (2%)

Query: 105 SLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
            +RVLD     LK+LP ++E L NL+ L +S N   L+TLP  IG L +L  L++ +N++
Sbjct: 45  DVRVLDLSQQKLKTLPNEIEQLKNLQRLYLSYN--QLKTLPKEIGQLQNLRVLELIHNQL 102

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            TLP+ I  L+ LQ+L L  N L + P ++
Sbjct: 103 ETLPNEIEQLKDLQRLYLSYNQLKTLPKEI 132


>gi|418670643|ref|ZP_13232008.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410753625|gb|EKR15289.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 264

 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 116/193 (60%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L N+  LD+ SNQLK L   I  L  L+ L +  + L +LPK I+  ++L+ 
Sbjct: 17  IPKEI-GQLKNLQTLDLSSNQLKTLSKEIVQLKNLQTLHLGYSQLTTLPKEIKQLKNLQT 75

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+  +N+L  LP  I  +L NL+TL +  N++ ILPQ +  L +L+ LD   N LK+L +
Sbjct: 76  LDLYYNQLTTLPKEIE-QLKNLQTLGLGYNRLTILPQEIGQLKNLQTLDLSSNQLKTLSK 134

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L NL+ L++  N   L TLP  I  + +L  L + YN++T LP  IG L+ LQ+L+
Sbjct: 135 EIVQLKNLQTLHLGNN--QLTTLPKEIEQMQNLQSLGLGYNQLTALPKEIGQLKNLQELN 192

Query: 182 LEGNPLVSPPMDV 194
           L  N L + P+++
Sbjct: 193 LWNNQLTTLPIEI 205



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 121/219 (55%), Gaps = 8/219 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  +QL  LP  I  L  L+ LD+  N L +LPK IE  ++L+ L   +N
Sbjct: 45  VQLKNLQTLHLGYSQLTTLPKEIKQLKNLQTLDLYYNQLTTLPKEIEQLKNLQTLGLGYN 104

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+TL ++ N++  L + +  L +L+ L    N L +LP+++E + 
Sbjct: 105 RLTILPQEIG-QLKNLQTLDLSSNQLKTLSKEIVQLKNLQTLHLGNNQLTTLPKEIEQMQ 163

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +   +  L  LP  IG L +L EL++  N++TTLP  IG L+ L+ L L  N L
Sbjct: 164 NLQSLGLG--YNQLTALPKEIGQLKNLQELNLWNNQLTTLPIEIGQLQSLKSLDLGNNQL 221

Query: 188 VSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKL 226
              P ++       +K   +  +NN+  + ++K  + KL
Sbjct: 222 KILPKEI-----GQLKNLQTLYLNNNQLAIEEKERIRKL 255



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 93/162 (57%), Gaps = 3/162 (1%)

Query: 33  LSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNK 92
           +  L+ L +  N ++++PK I   ++L+ L+ + N+L+ L   I  +L NL+TL +  ++
Sbjct: 1   MKNLQTLGLYYNQIKTIPKEIGQLKNLQTLDLSSNQLKTLSKEI-VQLKNLQTLHLGYSQ 59

Query: 93  IVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLM 152
           +  LP+ +  L +L+ LD   N L +LP+++E L NL+ L +   +  L  LP  IG L 
Sbjct: 60  LTTLPKEIKQLKNLQTLDLYYNQLTTLPKEIEQLKNLQTLGLG--YNRLTILPQEIGQLK 117

Query: 153 SLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +L  LD+S N++ TL   I  L+ LQ L L  N L + P ++
Sbjct: 118 NLQTLDLSSNQLKTLSKEIVQLKNLQTLHLGNNQLTTLPKEI 159



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/137 (37%), Positives = 81/137 (59%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +  +L N+  LD+ SNQLK L   I  L  L+ L +  N L +LPK IE  ++L+
Sbjct: 108 ILPQEI-GQLKNLQTLDLSSNQLKTLSKEIVQLKNLQTLHLGNNQLTTLPKEIEQMQNLQ 166

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L   +N+L  LP  IG +L NL+ L++  N++  LP  +  L SL+ LD   N LK LP
Sbjct: 167 SLGLGYNQLTALPKEIG-QLKNLQELNLWNNQLTTLPIEIGQLQSLKSLDLGNNQLKILP 225

Query: 121 EDLENLINLEVLNISQN 137
           +++  L NL+ L ++ N
Sbjct: 226 KEIGQLKNLQTLYLNNN 242


>gi|418719292|ref|ZP_13278492.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410744445|gb|EKQ93186.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
          Length = 399

 Score =  112 bits (279), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/187 (42%), Positives = 114/187 (60%), Gaps = 4/187 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  NQLK LP  IG L  L  L+++ N L +LPK I N ++L EL    N
Sbjct: 152 GQLQNLRELYLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINN 211

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +    +  LP  + +L SLR L+   N + +LP+D+  L 
Sbjct: 212 ELTTLPKEIG-KLKNLQVLYLGA-LLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQ 269

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+VL +S+N   L TLP  IG L +L ELD+S N+ITTLP  IG L+ L++L+L GN +
Sbjct: 270 NLQVLYLSEN--QLATLPKEIGQLQNLRELDLSGNQITTLPKEIGELQSLRELNLSGNQI 327

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 328 TTLPKEI 334



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 82/207 (39%), Positives = 117/207 (56%), Gaps = 21/207 (10%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  +  L + +NQL  LP  IG L KL+ LD++ NLL +LPK I   ++L EL    N
Sbjct: 83  GKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNNLLTTLPKEIGQLQNLRELYLYNN 142

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG +L NL+ L ++ N++  LP+ +  L +L  L+   N L +LP+D+ NL 
Sbjct: 143 QLKTLPKDIG-QLQNLRELYLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLK 201

Query: 128 NL-EVLNIS-------------QNFQY------LETLPYSIGLLMSLVELDVSYNKITTL 167
           NL E+L I+             +N Q       L TLP  IG L SL EL++S N+ITTL
Sbjct: 202 NLGELLLINNELTTLPKEIGKLKNLQVLYLGALLTTLPNDIGYLKSLRELNLSGNQITTL 261

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P  IG L+ LQ L L  N L + P ++
Sbjct: 262 PKDIGQLQNLQVLYLSENQLATLPKEI 288



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 80/187 (42%), Positives = 108/187 (57%), Gaps = 4/187 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L + SNQLK LP  IG L K++ L +S N L +LPK I   + L EL+   N
Sbjct: 60  GELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNN 119

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP  IG +L NL+ L +  N++  LP+ +  L +LR L    N LK+LP+D+  L 
Sbjct: 120 LLTTLPKEIG-QLQNLRELYLYNNQLKTLPKDIGQLQNLRELYLDGNQLKTLPKDIGKLQ 178

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  LN++ N   L TLP  IG L +L EL +  N++TTLP  IG L+ LQ L L G  L
Sbjct: 179 NLTELNLTNN--PLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNLQVLYL-GALL 235

Query: 188 VSPPMDV 194
            + P D+
Sbjct: 236 TTLPNDI 242



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/167 (41%), Positives = 102/167 (61%), Gaps = 4/167 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  LP  IG L  L+VL + G LL +LP  I   +SL ELN + N++  LP  IG +
Sbjct: 210 NNELTTLPKEIGKLKNLQVLYL-GALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIG-Q 267

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+ L ++ N++  LP+ +  L +LR LD   N + +LP+++  L +L  LN+S N  
Sbjct: 268 LQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGNQITTLPKEIGELQSLRELNLSGN-- 325

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
            + TLP  IG L SL EL++  N+ITT+P  IG L+ LQ L L+  P
Sbjct: 326 QITTLPKEIGKLQSLRELNLGGNQITTIPKEIGHLKNLQVLYLDDIP 372



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/189 (39%), Positives = 109/189 (57%), Gaps = 4/189 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +++NQLK LP  IG L  L+ L + GN L++LPK I   ++L ELN   N
Sbjct: 129 GQLQNLRELYLYNNQLKTLPKDIGQLQNLRELYLDGNQLKTLPKDIGKLQNLTELNLTNN 188

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP  IG  L NL  L +  N++  LP+ +  L +L+VL      L +LP D+  L 
Sbjct: 189 PLTTLPKDIG-NLKNLGELLLINNELTTLPKEIGKLKNLQVLYLGA-LLTTLPNDIGYLK 246

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  LN+S N   + TLP  IG L +L  L +S N++ TLP  IG L+ L++L L GN +
Sbjct: 247 SLRELNLSGN--QITTLPKDIGQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGNQI 304

Query: 188 VSPPMDVVE 196
            + P ++ E
Sbjct: 305 TTLPKEIGE 313



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/183 (38%), Positives = 106/183 (57%), Gaps = 5/183 (2%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V +L +H+N+   LP  IG L  L  L +S N L++LPK I   + +E L+ + N+L  
Sbjct: 43  DVRILSLHNNE--TLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTT 100

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L  L+ L +  N +  LP+ +  L +LR L    N LK+LP+D+  L NL  
Sbjct: 101 LPKDIG-KLKKLRELDLTNNLLTTLPKEIGQLQNLRELYLYNNQLKTLPKDIGQLQNLRE 159

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N   L+TLP  IG L +L EL+++ N +TTLP  IG L+ L +L L  N L + P
Sbjct: 160 LYLDGN--QLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLP 217

Query: 192 MDV 194
            ++
Sbjct: 218 KEI 220



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 65/102 (63%), Gaps = 1/102 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL +  NQL  LP  IG L  L+ LD+SGN + +LPK I   +SL ELN + N
Sbjct: 266 GQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGNQITTLPKEIGELQSLRELNLSGN 325

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           ++  LP  IG +L +L+ L++  N+I  +P+ + HL +L+VL
Sbjct: 326 QITTLPKEIG-KLQSLRELNLGGNQITTIPKEIGHLKNLQVL 366



 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 4/77 (5%)

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
           +L E L+N  ++ +L++  N    ETLP  IG L +L EL +S N++ TLP  IG L+K+
Sbjct: 33  NLTEALQNPTDVRILSLHNN----ETLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKI 88

Query: 178 QKLSLEGNPLVSPPMDV 194
           ++LSL  N L + P D+
Sbjct: 89  ERLSLSNNQLTTLPKDI 105


>gi|456891504|gb|EMG02215.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 402

 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/172 (42%), Positives = 108/172 (62%), Gaps = 3/172 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           VLD++ NQL  LP  IG L  L+ L +  N L++LP  I   ++L+ L+   N+L+ LP 
Sbjct: 207 VLDLNGNQLTTLPKEIGELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPK 266

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            IG EL NL+ L +  N++  LP+ +  L +L VLD  +N LK+LP+++  L NL VL++
Sbjct: 267 EIG-ELQNLQELYLYTNQLKTLPKEIGELQNLTVLDLHINELKTLPKEIGELQNLTVLDL 325

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
             N   L+TLP  IG L SL  LD+  N++ TLP+ IG L++L+KL L+  P
Sbjct: 326 RNN--ELKTLPKEIGELQSLTVLDLRNNELKTLPNEIGKLKELRKLHLDDIP 375



 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/189 (40%), Positives = 110/189 (58%), Gaps = 3/189 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VLD+  NQL  LPN IG L KL+ L +  N L++L K I   + L+ L+ N N
Sbjct: 154 GQLQNLQVLDLEHNQLTTLPNDIGKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNGN 213

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG EL NL+ L +  N++  LP  +  L +L+VL    N LK+LP+++  L 
Sbjct: 214 QLTTLPKEIG-ELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEIGELQ 272

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +  N   L+TLP  IG L +L  LD+  N++ TLP  IG L+ L  L L  N L
Sbjct: 273 NLQELYLYTN--QLKTLPKEIGELQNLTVLDLHINELKTLPKEIGELQNLTVLDLRNNEL 330

Query: 188 VSPPMDVVE 196
            + P ++ E
Sbjct: 331 KTLPKEIGE 339



 Score =  107 bits (267), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 74/189 (39%), Positives = 115/189 (60%), Gaps = 3/189 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+ +L+++ NQL  LPN IG L  L++L++  N   +LP  I   ++L+EL+ +FN
Sbjct: 62  GELQNLRILNLYRNQLTTLPNEIGKLQNLQLLNLDKNQFTALPNDIGKLKNLQELHLSFN 121

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L   P+ IG +L NL+ L ++ N++  LP  +  L +L+VLD   N L +LP D+  L 
Sbjct: 122 QLTTFPNDIG-QLQNLRELHLSVNQLTTLPNDIGQLQNLQVLDLEHNQLTTLPNDIGKLQ 180

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++ +N   L+TL   IG L  L  LD++ N++TTLP  IG L+ L++L L  N L
Sbjct: 181 KLERLSLIEN--QLKTLSKEIGYLKELQVLDLNGNQLTTLPKEIGELKNLRELHLYKNQL 238

Query: 188 VSPPMDVVE 196
            + P D+ E
Sbjct: 239 KTLPNDIGE 247



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 107/185 (57%), Gaps = 3/185 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V +LD+ + +L  LP  IG L  L++L++  N L +LP  I   ++L+ LN + N+   
Sbjct: 43  DVRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEIGKLQNLQLLNLDKNQFTA 102

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ IG +L NL+ L ++ N++   P  +  L +LR L   +N L +LP D+  L NL+V
Sbjct: 103 LPNDIG-KLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPNDIGQLQNLQV 161

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L++  N   L TLP  IG L  L  L +  N++ TL   IG L++LQ L L GN L + P
Sbjct: 162 LDLEHN--QLTTLPNDIGKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNGNQLTTLP 219

Query: 192 MDVVE 196
            ++ E
Sbjct: 220 KEIGE 224



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 106/190 (55%), Gaps = 4/190 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
            NQ   LPN IG L  L+ L +S N L + P  I   ++L EL+ + N+L  LP+ IG +
Sbjct: 97  KNQFTALPNDIGKLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPNDIG-Q 155

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+ L +  N++  LP  +  L  L  L    N LK+L +++  L  L+VL+++ N  
Sbjct: 156 LQNLQVLDLEHNQLTTLPNDIGKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNGN-- 213

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
            L TLP  IG L +L EL +  N++ TLP+ IG L+ LQ L +  N L + P ++ E Q 
Sbjct: 214 QLTTLPKEIGELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEIGELQN 273

Query: 199 LSAVKGYLSE 208
           L  +  Y ++
Sbjct: 274 LQELYLYTNQ 283



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 44/70 (62%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+ VLD+H N+LK LP  IG L  L VLD+  N L++LPK I   +SL  L+   N
Sbjct: 292 GELQNLTVLDLHINELKTLPKEIGELQNLTVLDLRNNELKTLPKEIGELQSLTVLDLRNN 351

Query: 68  KLRQLPDTIG 77
           +L+ LP+ IG
Sbjct: 352 ELKTLPNEIG 361


>gi|260812954|ref|XP_002601185.1| hypothetical protein BRAFLDRAFT_214496 [Branchiostoma floridae]
 gi|229286476|gb|EEN57197.1| hypothetical protein BRAFLDRAFT_214496 [Branchiostoma floridae]
          Length = 871

 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 119/214 (55%), Gaps = 9/214 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL  +  LD+  N L+ LP  +G L+ +K LD+S   L  LP  +     LE L+ +FN
Sbjct: 139 GRLTQLEWLDLSFNLLQTLPPEVGQLTNVKHLDLSRCQLHILPPEVGRMTQLEWLDLSFN 198

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G +L NL+ L ++ N +  LP  +  LT+L  L    N L++LP ++  L 
Sbjct: 199 PLQTLPPEVG-QLTNLEWLGLSSNPLQTLPAEVGQLTNLEWLGLSSNPLQTLPAEVGQLT 257

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK------LQKLS 181
           N++ L++S+    L TLP  +G L  L  L ++ N++ TLP  +G L +      L  + 
Sbjct: 258 NVKHLDMSRC--QLRTLPPEVGRLTQLKWLGLTSNQLQTLPAEVGQLSRPYHLDVLCDID 315

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHK 215
           + GNPL+ PP +V  QG++A++ Y  E  +++ K
Sbjct: 316 VAGNPLIKPPAEVCRQGITAIRQYFDELEHSEEK 349



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 22/196 (11%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+   LP+ +  L  L  LD+    LESLP  +     +  L+ + N+   LPD +   
Sbjct: 13  NNETITLPDEMSGLVNLTTLDLDNCGLESLPPVVLKLSHVHSLDLSHNEQISLPDEL-CR 71

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQ--- 136
           L N+K L +    I+ +P ++  LT L  LD   N    LP+ L  L N+ VLN+     
Sbjct: 72  LENIKVLRLRGCNIMTVPSAVLKLTQLEELDISGNYRIHLPDGLSGLTNIRVLNLEGTGM 131

Query: 137 ------------------NFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQ 178
                             +F  L+TLP  +G L ++  LD+S  ++  LP  +G + +L+
Sbjct: 132 GIVSLVLGRLTQLEWLDLSFNLLQTLPPEVGQLTNVKHLDLSRCQLHILPPEVGRMTQLE 191

Query: 179 KLSLEGNPLVSPPMDV 194
            L L  NPL + P +V
Sbjct: 192 WLDLSFNPLQTLPPEV 207


>gi|418721878|ref|ZP_13281050.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410741675|gb|EKQ90430.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
          Length = 201

 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/175 (40%), Positives = 110/175 (62%), Gaps = 3/175 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+ +L+++ NQL  LPN IG L  L+ L+++ N L++LPK I   ++L EL    N+L+ 
Sbjct: 3   NLRILNLYRNQLTTLPNEIGELQNLRELNLTKNQLKTLPKEIGKLQNLRELRLAENQLKT 62

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ IG EL NL  L +  N++  +P+ +  L +L VLD  +N L +LP+++  L NL  
Sbjct: 63  LPNEIG-ELQNLTILDLRNNELKTIPKDIGKLKNLTVLDLHINQLTTLPKEIGKLKNLTK 121

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           L++  N+  L TLP  IG L  L  LD+  N++ T+P+ IG L++L+KL L+  P
Sbjct: 122 LDL--NYNELTTLPKEIGELQKLTILDLRNNELKTIPNEIGKLKELRKLYLDDIP 174



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/141 (39%), Positives = 84/141 (59%), Gaps = 3/141 (2%)

Query: 56  CRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNC 115
            ++L  LN   N+L  LP+ IG EL NL+ L++  N++  LP+ +  L +LR L    N 
Sbjct: 1   MQNLRILNLYRNQLTTLPNEIG-ELQNLRELNLTKNQLKTLPKEIGKLQNLRELRLAENQ 59

Query: 116 LKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLR 175
           LK+LP ++  L NL +L++  N   L+T+P  IG L +L  LD+  N++TTLP  IG L+
Sbjct: 60  LKTLPNEIGELQNLTILDLRNN--ELKTIPKDIGKLKNLTVLDLHINQLTTLPKEIGKLK 117

Query: 176 KLQKLSLEGNPLVSPPMDVVE 196
            L KL L  N L + P ++ E
Sbjct: 118 NLTKLDLNYNELTTLPKEIGE 138



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 78/138 (56%), Gaps = 8/138 (5%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  NQLK LPN IG L  L +LD+  N L+++PK I   ++L  L+ + N
Sbjct: 45  GKLQNLRELRLAENQLKTLPNEIGELQNLTILDLRNNELKTIPKDIGKLKNLTVLDLHIN 104

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL  L +N N++  LP+ +  L  L +LD R N LK++P ++  L 
Sbjct: 105 QLTTLPKEIG-KLKNLTKLDLNYNELTTLPKEIGELQKLTILDLRNNELKTIPNEIGKLK 163

Query: 128 NLEVLNISQNFQYLETLP 145
            L  L       YL+ +P
Sbjct: 164 ELRKL-------YLDDIP 174



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 1/76 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L N+ VLD+H NQL  LP  IG L  L  LD++ N L +LPK I   + L  
Sbjct: 86  IPKDI-GKLKNLTVLDLHINQLTTLPKEIGKLKNLTKLDLNYNELTTLPKEIGELQKLTI 144

Query: 62  LNANFNKLRQLPDTIG 77
           L+   N+L+ +P+ IG
Sbjct: 145 LDLRNNELKTIPNEIG 160


>gi|434388059|ref|YP_007098670.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
 gi|428019049|gb|AFY95143.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
          Length = 993

 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 110/189 (58%), Gaps = 3/189 (1%)

Query: 6   LTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNAN 65
           +  +L ++  L + SNQ+  +P +IG L+ L  L +S N +  +P+ I N  SL  L+ +
Sbjct: 228 MIGKLTSLTSLKLWSNQIAIIPEAIGNLTSLTALGLSSNQIAIIPEAIGNLTSLTSLDLS 287

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
           FN++ +LP TIG  L +L +LS+  N+I  LPQ++ +LTSL  L    N +  LP+ + N
Sbjct: 288 FNQIAELPQTIG-NLTSLTSLSLRNNQIAELPQTIGNLTSLTNLFLGRNKIAELPQTIGN 346

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L +L  L +S N   +  LP +IG L SL  LD+S+N+I  LP +IG L  L  L+L  N
Sbjct: 347 LTSLTSLYLSNN--QIAELPQTIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLNLYNN 404

Query: 186 PLVSPPMDV 194
            +   P  +
Sbjct: 405 QIAELPQTI 413



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/193 (39%), Positives = 105/193 (54%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE L   L N+  L    N L+ LP SI  L  LK L + GN L  LP++I     LEE
Sbjct: 133 IPE-LVFSLTNLTYLGFSENNLQVLPESISNLKNLKKLSLGGNSLSQLPESIALLTELEE 191

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    NKL ++P  IG +L +L +L++  N+I  LPQ +  LTSL  L    N +  +PE
Sbjct: 192 LYIWENKLTEIPQAIG-KLTSLTSLNLGENQIAELPQMIGKLTSLTSLKLWSNQIAIIPE 250

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + NL +L  L +S N   +  +P +IG L SL  LD+S+N+I  LP +IG L  L  LS
Sbjct: 251 AIGNLTSLTALGLSSN--QIAIIPEAIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLS 308

Query: 182 LEGNPLVSPPMDV 194
           L  N +   P  +
Sbjct: 309 LRNNQIAELPQTI 321



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 110/194 (56%), Gaps = 4/194 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IPE++   L ++  L + SNQ+  +P +IG L+ L  LD+S N +  LP+TI N  SL 
Sbjct: 247 IIPEAI-GNLTSLTALGLSSNQIAIIPEAIGNLTSLTSLDLSFNQIAELPQTIGNLTSLT 305

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   N++ +LP TIG  L +L  L +  NKI  LPQ++ +LTSL  L    N +  LP
Sbjct: 306 SLSLRNNQIAELPQTIG-NLTSLTNLFLGRNKIAELPQTIGNLTSLTSLYLSNNQIAELP 364

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           + + NL +L  L++S  F  +  LP +IG L SL  L++  N+I  LP +IG L  L  L
Sbjct: 365 QTIGNLTSLTSLDLS--FNQIAELPQTIGNLTSLTSLNLYNNQIAELPQTIGNLTSLTNL 422

Query: 181 SLEGNPLVSPPMDV 194
            L  N +   P  +
Sbjct: 423 FLSNNQIAELPQTI 436



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 113/190 (59%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+++   L ++  L++++NQ+  LP +IG L+ L  L +S N +  LP+TI N  SL  
Sbjct: 386 LPQTI-GNLTSLTSLNLYNNQIAELPQTIGNLTSLTNLFLSNNQIAELPQTIGNLTSLTS 444

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N++ +LP TIG  L +L +L ++ N+I  LPQ + +LTSL  L+   N +  L +
Sbjct: 445 LNLWSNQIAELPQTIG-NLTSLTSLDLSFNQIAELPQMIGNLTSLTNLNLSFNQIAELLQ 503

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + NL +L  L++S N   +  LP +IG L SL +L +  N+I  +P+    L  L+KL 
Sbjct: 504 TIGNLTSLSDLDLSNN--QIAELPQTIGNLTSLTDLKLYNNQIAVIPEWFRSLNNLEKLD 561

Query: 182 LEGNPLVSPP 191
           L GNP+  PP
Sbjct: 562 LRGNPVPIPP 571



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/193 (37%), Positives = 111/193 (57%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+++   L ++  L + +NQ+  LP +IG L+ L  LD+S N +  LP+TI N  SL  
Sbjct: 340 LPQTI-GNLTSLTSLYLSNNQIAELPQTIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTS 398

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N++ +LP TIG  L +L  L ++ N+I  LPQ++ +LTSL  L+   N +  LP+
Sbjct: 399 LNLYNNQIAELPQTIG-NLTSLTNLFLSNNQIAELPQTIGNLTSLTSLNLWSNQIAELPQ 457

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + NL +L  L++S  F  +  LP  IG L SL  L++S+N+I  L  +IG L  L  L 
Sbjct: 458 TIGNLTSLTSLDLS--FNQIAELPQMIGNLTSLTNLNLSFNQIAELLQTIGNLTSLSDLD 515

Query: 182 LEGNPLVSPPMDV 194
           L  N +   P  +
Sbjct: 516 LSNNQIAELPQTI 528



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 93/176 (52%), Gaps = 3/176 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LDV  N++K LP+ +  ++ L  L + GN +ESLP        L EL    + L ++P+ 
Sbjct: 77  LDVWENKIKSLPDWLAQITNLTKLYLYGNKIESLPNWFSEMTRLTELGLGNSGLAEIPEL 136

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           + F L NL  L  + N + +LP+S+++L +L+ L    N L  LPE +  L  LE L I 
Sbjct: 137 V-FSLTNLTYLGFSENNLQVLPESISNLKNLKKLSLGGNSLSQLPESIALLTELEELYIW 195

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           +N   L  +P +IG L SL  L++  N+I  LP  IG L  L  L L  N +   P
Sbjct: 196 EN--KLTEIPQAIGKLTSLTSLNLGENQIAELPQMIGKLTSLTSLKLWSNQIAIIP 249



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 88/172 (51%), Gaps = 3/172 (1%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
            N L  +P  I  L KL  LDV  N ++SLP  +    +L +L    NK+  LP+    E
Sbjct: 58  GNLLTEIPPVILSLPKLTSLDVWENKIKSLPDWLAQITNLTKLYLYGNKIESLPNWFS-E 116

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           +  L  L +  + +  +P+ +  LT+L  L    N L+ LPE + NL NL+ L++  N  
Sbjct: 117 MTRLTELGLGNSGLAEIPELVFSLTNLTYLGFSENNLQVLPESISNLKNLKKLSLGGN-- 174

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            L  LP SI LL  L EL +  NK+T +P +IG L  L  L+L  N +   P
Sbjct: 175 SLSQLPESIALLTELEELYIWENKLTEIPQAIGKLTSLTSLNLGENQIAELP 226



 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 94/189 (49%), Gaps = 13/189 (6%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVS----------GNLLESLPKTIENCRSLEELNAN 65
           LD+    L  LP  IG L+ L+ L +           GNLL  +P  I +   L  L+  
Sbjct: 21  LDLAGMNLTELPPEIGKLTHLEKLILGKWDDKTGKAIGNLLTEIPPVILSLPKLTSLDVW 80

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
            NK++ LPD +  ++ NL  L +  NKI  LP   + +T L  L    + L  +PE + +
Sbjct: 81  ENKIKSLPDWLA-QITNLTKLYLYGNKIESLPNWFSEMTRLTELGLGNSGLAEIPELVFS 139

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L NL  L  S+N   L+ LP SI  L +L +L +  N ++ LP+SI  L +L++L +  N
Sbjct: 140 LTNLTYLGFSEN--NLQVLPESISNLKNLKKLSLGGNSLSQLPESIALLTELEELYIWEN 197

Query: 186 PLVSPPMDV 194
            L   P  +
Sbjct: 198 KLTEIPQAI 206



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 70/122 (57%), Gaps = 2/122 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+++   L ++  LD+  NQ+  LP  IG L+ L  L++S N +  L +TI N  SL +
Sbjct: 455 LPQTI-GNLTSLTSLDLSFNQIAELPQMIGNLTSLTNLNLSFNQIAELLQTIGNLTSLSD 513

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N++ +LP TIG  L +L  L +  N+I ++P+    L +L  LD R N +   PE
Sbjct: 514 LDLSNNQIAELPQTIG-NLTSLTDLKLYNNQIAVIPEWFRSLNNLEKLDLRGNPVPIPPE 572

Query: 122 DL 123
            L
Sbjct: 573 IL 574


>gi|456874712|gb|EMF89984.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 269

 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/175 (41%), Positives = 105/175 (60%), Gaps = 3/175 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           NQL  LP  IG L KL+ L +S N L +LPK IE  + L+ L+ N NKL  LP  IG +L
Sbjct: 83  NQLATLPKEIGQLKKLQTLHLSENQLTTLPKEIEQLKKLQTLDLNHNKLTTLPKEIG-QL 141

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            NL+ L++N N++  LP+ +  L +L  L+   N L +LP+++  L  L+ L +  N   
Sbjct: 142 QNLQELNLNGNQLTTLPKEIGQLKNLYRLELNSNQLATLPKEIGQLQKLQSLGLYSN--Q 199

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
           L TLP  IG L +L ELD+S N++TTLP  I  L+ L+ LSL+ N  + P  + +
Sbjct: 200 LTTLPKEIGKLQNLQELDLSENQLTTLPKEIEQLKNLRWLSLKNNTALIPQKNEI 254



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/183 (38%), Positives = 106/183 (57%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V +L +   +L  LP  IG L  L++LD+S N L +LPK I   + L+ L+ + N+L  
Sbjct: 51  DVRILGLSGRELATLPKEIGQLQNLQLLDLSKNQLATLPKEIGQLKKLQTLHLSENQLTT 110

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  I  +L  L+TL +N NK+  LP+ +  L +L+ L+   N L +LP+++  L NL  
Sbjct: 111 LPKEIE-QLKKLQTLDLNHNKLTTLPKEIGQLQNLQELNLNGNQLTTLPKEIGQLKNLYR 169

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L ++ N   L TLP  IG L  L  L +  N++TTLP  IG L+ LQ+L L  N L + P
Sbjct: 170 LELNSN--QLATLPKEIGQLQKLQSLGLYSNQLTTLPKEIGKLQNLQELDLSENQLTTLP 227

Query: 192 MDV 194
            ++
Sbjct: 228 KEI 230



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 25/122 (20%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPE-----------------------DLENLINLEVL 132
           L ++L +   +R+L      L +LP+                       ++  L  L+ L
Sbjct: 42  LAKALQNPKDVRILGLSGRELATLPKEIGQLQNLQLLDLSKNQLATLPKEIGQLKKLQTL 101

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
           ++S+N   L TLP  I  L  L  LD+++NK+TTLP  IG L+ LQ+L+L GN L + P 
Sbjct: 102 HLSEN--QLTTLPKEIEQLKKLQTLDLNHNKLTTLPKEIGQLQNLQELNLNGNQLTTLPK 159

Query: 193 DV 194
           ++
Sbjct: 160 EI 161


>gi|319954347|ref|YP_004165614.1| adenylate cyclase [Cellulophaga algicola DSM 14237]
 gi|319423007|gb|ADV50116.1| Adenylate cyclase [Cellulophaga algicola DSM 14237]
          Length = 606

 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/227 (35%), Positives = 112/227 (49%), Gaps = 47/227 (20%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+ S  L  +P+SIG L  LK LD+S NLL  LP+ I N + LE+L AN NKL QL
Sbjct: 37  IEYLDLSSKNLTEIPSSIGALIHLKTLDISNNLLTQLPEEIGNLKHLEKLVANKNKLTQL 96

Query: 73  PDTI---------------------------------------------GFELINLKTLS 87
           P+ I                                              + L+NLK L 
Sbjct: 97  PEFILNLKELKDLRLDKNQISTLPKKIDKLAKLEKLTLRDNRLSVLPKSFYNLLNLKELD 156

Query: 88  INCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYS 147
           +  N I  + + ++ L SL VL  + N LK LPE + NL +LE L +  N   L +LP+S
Sbjct: 157 LTSNTITQISKDISKLQSLTVLQLQFNPLKELPEKVGNLASLETLWL--NKTELSSLPHS 214

Query: 148 IGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           IG L +L +L   YN + ++P +I  L+ L+ LSLE N + S P D+
Sbjct: 215 IGKLSNLKDLSAGYNHLKSIPATITALKNLESLSLEKNLISSLPADI 261



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 76/130 (58%), Gaps = 2/130 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++L ++ VL +  N LK LP  +G L+ L+ L ++   L SLP +I    +L++L+A +N
Sbjct: 170 SKLQSLTVLQLQFNPLKELPEKVGNLASLETLWLNKTELSSLPHSIGKLSNLKDLSAGYN 229

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ +P TI   L NL++LS+  N I  LP  + +LT L+ L+   N L S+P  L NL 
Sbjct: 230 HLKSIPATIT-ALKNLESLSLEKNLISSLPADIGNLTKLKRLNLNTNKLTSIPASLGNL- 287

Query: 128 NLEVLNISQN 137
            L  L + +N
Sbjct: 288 KLSALYLKEN 297



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 3/147 (2%)

Query: 48  SLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
           SL + ++    +E L+ +   L ++P +IG  LI+LKTL I+ N +  LP+ + +L  L 
Sbjct: 26  SLEEALQTPERIEYLDLSSKNLTEIPSSIG-ALIHLKTLDISNNLLTQLPEEIGNLKHLE 84

Query: 108 VLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
            L A  N L  LPE + NL  L+ L + +N   + TLP  I  L  L +L +  N+++ L
Sbjct: 85  KLVANKNKLTQLPEFILNLKELKDLRLDKN--QISTLPKKIDKLAKLEKLTLRDNRLSVL 142

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P S   L  L++L L  N +     D+
Sbjct: 143 PKSFYNLLNLKELDLTSNTITQISKDI 169



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 3/99 (3%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P S+  +L N+  L    N LK +P +I  L  L+ L +  NL+ SLP  I N   L+ 
Sbjct: 211 LPHSI-GKLSNLKDLSAGYNHLKSIPATITALKNLESLSLEKNLISSLPADIGNLTKLKR 269

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSL 100
           LN N NKL  +P ++G   + L  L +  N I  LP+++
Sbjct: 270 LNLNTNKLTSIPASLGN--LKLSALYLKENDITELPEAV 306


>gi|434385707|ref|YP_007096318.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
 gi|428016697|gb|AFY92791.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
          Length = 400

 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/191 (38%), Positives = 117/191 (61%), Gaps = 4/191 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P S+  ++ +++ L + +N LK LP SIG L+ LK L++  N L +LP++IE   +LE 
Sbjct: 31  LPSSI-GQVTSLLRLTLVNNMLKTLPESIGQLTNLKSLEIRDNRLTTLPESIELLTNLES 89

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+L  LP++IG  L NL  L +  N++  LP+S+  LTSL  ++   N L SLP+
Sbjct: 90  LELWNNRLINLPESIG-RLTNLTLLDLQQNQLTTLPESVGQLTSLNYIELGNNQLTSLPD 148

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
             +NLI+L+ L +S N     ++P SIG L +L  LD+  N++T LP+ IG    L++L 
Sbjct: 149 SFKNLIDLQSLQLSDN--QFTSVPESIGELTNLKWLDLDGNQLTNLPEFIGEFSNLKRLK 206

Query: 182 LEGNPLVSPPM 192
           ++ N L S P+
Sbjct: 207 IQDNHLTSLPL 217



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 110/185 (59%), Gaps = 3/185 (1%)

Query: 7   TARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANF 66
           TA+  N+  + +    L  LP+SIG ++ L  L +  N+L++LP++I    +L+ L    
Sbjct: 12  TAKDKNLQRISIEHGNLGALPSSIGQVTSLLRLTLVNNMLKTLPESIGQLTNLKSLEIRD 71

Query: 67  NKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENL 126
           N+L  LP++I   L NL++L +  N+++ LP+S+  LT+L +LD + N L +LPE +  L
Sbjct: 72  NRLTTLPESIEL-LTNLESLELWNNRLINLPESIGRLTNLTLLDLQQNQLTTLPESVGQL 130

Query: 127 INLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
            +L  + +  N   L +LP S   L+ L  L +S N+ T++P+SIG L  L+ L L+GN 
Sbjct: 131 TSLNYIELGNN--QLTSLPDSFKNLIDLQSLQLSDNQFTSVPESIGELTNLKWLDLDGNQ 188

Query: 187 LVSPP 191
           L + P
Sbjct: 189 LTNLP 193



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/154 (41%), Positives = 90/154 (58%), Gaps = 4/154 (2%)

Query: 43  GNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTH 102
           GNL  +LP +I    SL  L    N L+ LP++IG +L NLK+L I  N++  LP+S+  
Sbjct: 26  GNL-GALPSSIGQVTSLLRLTLVNNMLKTLPESIG-QLTNLKSLEIRDNRLTTLPESIEL 83

Query: 103 LTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYN 162
           LT+L  L+   N L +LPE +  L NL +L++ QN   L TLP S+G L SL  +++  N
Sbjct: 84  LTNLESLELWNNRLINLPESIGRLTNLTLLDLQQN--QLTTLPESVGQLTSLNYIELGNN 141

Query: 163 KITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           ++T+LPDS   L  LQ L L  N   S P  + E
Sbjct: 142 QLTSLPDSFKNLIDLQSLQLSDNQFTSVPESIGE 175



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 10/163 (6%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+  RL N+ +LD+  NQL  LP S+G L+ L  +++  N L SLP + +N   L+ 
Sbjct: 100 LPESI-GRLTNLTLLDLQQNQLTTLPESVGQLTSLNYIELGNNQLTSLPDSFKNLIDLQS 158

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+   +P++IG EL NLK L ++ N++  LP+ +   ++L+ L  + N L SLP 
Sbjct: 159 LQLSDNQFTSVPESIG-ELTNLKWLDLDGNQLTNLPEFIGEFSNLKRLKIQDNHLTSLPL 217

Query: 122 DLENLINLEVLNISQN----FQYLETLPYSIGLLMSLVELDVS 160
               L  LE L +S N       L++LP     L  +V  DVS
Sbjct: 218 WFTKLEKLERLELSNNPLTDLSILQSLPK----LKEVVFFDVS 256


>gi|456875031|gb|EMF90265.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 526

 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 109/186 (58%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L  +  L +  NQL  LP  IG L KLK L + GN   +LPK IE  + L+EL+   N+
Sbjct: 143 KLQKLQKLSLAHNQLTTLPEEIGKLQKLKELHLDGNQFTTLPKEIEKLQKLKELHLGSNR 202

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
              LP  I  +L NL+ L+++ N+   LP+ +  L +L+ L+   N   +LP++++ L N
Sbjct: 203 FTTLPKEIK-KLQNLQWLNLDSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIKKLQN 261

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ LN+  N     TLP  IG L  L +L +++N++TTLP  IG L+ LQ+L+L  N L 
Sbjct: 262 LQWLNLDSN--RFTTLPKEIGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTLWENQLT 319

Query: 189 SPPMDV 194
           + P ++
Sbjct: 320 TLPKEI 325



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 109/208 (52%), Gaps = 22/208 (10%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  +  LD++ N L  LP  IG L KL  L +  N L + PK IE  + L++L+   N
Sbjct: 96  GKLQKLEWLDLNYNSLATLPKEIGKLQKLDDLRLPNNQLTTFPKEIEKLQKLQKLSLAHN 155

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L  LK L ++ N+   LP+ +  L  L+ L    N   +LP++++ L 
Sbjct: 156 QLTTLPEEIG-KLQKLKELHLDGNQFTTLPKEIEKLQKLKELHLGSNRFTTLPKEIKKLQ 214

Query: 128 NLEVLNIS--------------QNFQYLE-------TLPYSIGLLMSLVELDVSYNKITT 166
           NL+ LN+               QN Q+L        TLP  I  L +L  L++  N+ TT
Sbjct: 215 NLQWLNLDSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIKKLQNLQWLNLDSNRFTT 274

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           LP  IG L+KLQKLSL  N L + P ++
Sbjct: 275 LPKEIGNLQKLQKLSLAHNQLTTLPKEI 302



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/232 (33%), Positives = 113/232 (48%), Gaps = 47/232 (20%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++ SN+   LP  IG L KL+ L ++ N L +LPK I   +SL+ L    N
Sbjct: 257 KKLQNLQWLNLDSNRFTTLPKEIGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTLWEN 316

Query: 68  KLRQLPDTIGF----------------------ELINLKTLSINCNKIVILPQSLTHLTS 105
           +L  LP  IG                       +L NL+ L +  N+   LP+ + +L +
Sbjct: 317 QLTTLPKEIGNLQNLQKLNLNNNPLTTLPKEIGKLQNLQQLFLGGNQFTTLPKEIGNLQN 376

Query: 106 LRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
           L+ LD   N L +LP+++ NL NL+ L++  N   L TLP  IG L SL  LD+SYN +T
Sbjct: 377 LQKLDLYYNKLTTLPKEIGNLQNLQKLDLYNN--QLTTLPKEIGNLQSLESLDLSYNDLT 434

Query: 166 TLPDSIGC-----------------------LRKLQKLSLEGNPLVSPPMDV 194
           TLP  IG                        L+KL+ L L GN L + P ++
Sbjct: 435 TLPKEIGKLQKLKKLELYYNQLKTLPKEIEKLQKLETLGLYGNQLTTLPEEI 486



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 66/175 (37%), Positives = 101/175 (57%), Gaps = 3/175 (1%)

Query: 29  SIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSI 88
            IG L  L+ L + GN   +LPK I N ++L++L+  +NKL  LP  IG  L NL+ L +
Sbjct: 347 EIGKLQNLQQLFLGGNQFTTLPKEIGNLQNLQKLDLYYNKLTTLPKEIG-NLQNLQKLDL 405

Query: 89  NCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSI 148
             N++  LP+ + +L SL  LD   N L +LP+++  L  L+ L +  N   L+TLP  I
Sbjct: 406 YNNQLTTLPKEIGNLQSLESLDLSYNDLTTLPKEIGKLQKLKKLELYYN--QLKTLPKEI 463

Query: 149 GLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVK 203
             L  L  L +  N++TTLP+ IG L+KLQ+L L  NP +    + +++ L  V+
Sbjct: 464 EKLQKLETLGLYGNQLTTLPEEIGKLQKLQELDLGDNPSLIDQKEKIQKLLPNVR 518



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 97/187 (51%), Gaps = 7/187 (3%)

Query: 12  NVVVLDVHS----NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +V  LD+ +    ++L  LP  IG L  L+ L + G  L +LPK I   + LE L+ N+N
Sbjct: 50  DVRTLDLQAQDSNHKLTNLPKEIGNLQNLQKLSLYGKQLTTLPKEIGKLQKLEWLDLNYN 109

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP  IG +L  L  L +  N++   P+ +  L  L+ L    N L +LPE++  L 
Sbjct: 110 SLATLPKEIG-KLQKLDDLRLPNNQLTTFPKEIEKLQKLQKLSLAHNQLTTLPEEIGKLQ 168

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L++  N     TLP  I  L  L EL +  N+ TTLP  I  L+ LQ L+L+ N  
Sbjct: 169 KLKELHLDGN--QFTTLPKEIEKLQKLKELHLGSNRFTTLPKEIKKLQNLQWLNLDSNRF 226

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 227 TTLPKEI 233



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/173 (36%), Positives = 83/173 (47%), Gaps = 31/173 (17%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  LD++ N+L  LP  IG L  L+ LD+  N L +LPK I N +SLE L+ ++N
Sbjct: 372 GNLQNLQKLDLYYNKLTTLPKEIGNLQNLQKLDLYNNQLTTLPKEIGNLQSLESLDLSYN 431

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP  IG                         L  L+ L+   N LK+LP+++E L 
Sbjct: 432 DLTTLPKEIG------------------------KLQKLKKLELYYNQLKTLPKEIEKLQ 467

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            LE L +  N   L TLP  IG L  L ELD+  N     P  I    K+QKL
Sbjct: 468 KLETLGLYGN--QLTTLPEEIGKLQKLQELDLGDN-----PSLIDQKEKIQKL 513



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 60/103 (58%), Gaps = 6/103 (5%)

Query: 96  LPQSLTHLTSLRVLDARL----NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLL 151
           L ++L H T +R LD +     + L +LP+++ NL NL+ L++    + L TLP  IG L
Sbjct: 41  LTEALQHPTDVRTLDLQAQDSNHKLTNLPKEIGNLQNLQKLSLY--GKQLTTLPKEIGKL 98

Query: 152 MSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             L  LD++YN + TLP  IG L+KL  L L  N L + P ++
Sbjct: 99  QKLEWLDLNYNSLATLPKEIGKLQKLDDLRLPNNQLTTFPKEI 141


>gi|341886752|gb|EGT42687.1| CBN-LET-413 protein [Caenorhabditis brenneri]
          Length = 711

 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/193 (37%), Positives = 115/193 (59%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP S+ A L N+  LD+  N+++ LP  IG L+ L+   V  N L+SLP +I +CR+L++
Sbjct: 166 IPNSI-AELKNLEELDLGQNEIEELPQKIGKLTSLREFYVDTNFLQSLPDSISDCRNLDQ 224

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L +LPD +G  + +L  L+I+ N+I+ LP S+ +L  L++L A  N L  L  
Sbjct: 225 LDVSDNRLSRLPDNLG-NMTSLTDLNISSNEIIELPSSIGNLKRLQMLKAERNSLTQLAP 283

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++    +L  + + QN  YL  LP +IG L  L  L+V  N ++ +P++IG  + L  LS
Sbjct: 284 EIGQCQSLTEMYLGQN--YLSDLPDTIGDLRQLTTLNVDCNNLSEIPETIGNCKSLTVLS 341

Query: 182 LEGNPLVSPPMDV 194
           L  N L   PM +
Sbjct: 342 LRQNILTELPMTI 354



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/175 (40%), Positives = 104/175 (59%), Gaps = 3/175 (1%)

Query: 17  DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTI 76
           DV  N+L  LP  IG L++L  L+++ N +  +P+T++NC+ L  L+ N N   +LP++I
Sbjct: 65  DVSDNELSVLPPDIGHLTQLIELNLNRNTITDIPETLKNCKLLTNLHLNGNPFTRLPESI 124

Query: 77  GFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQ 136
             E  ++  LS+N   + ILP ++  L +LRVLDAR N L+++P  +  L NLE L++ Q
Sbjct: 125 -CECTSITILSLNDTTLTILPANIGLLVNLRVLDARENHLRTIPNSIAELKNLEELDLGQ 183

Query: 137 NFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           N   +E LP  IG L SL E  V  N + +LPDSI   R L +L +  N L   P
Sbjct: 184 N--EIEELPQKIGKLTSLREFYVDTNFLQSLPDSISDCRNLDQLDVSDNRLSRLP 236



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 110/211 (52%), Gaps = 23/211 (10%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+     ++ +L ++   L  LP +IG L  L+VLD   N L ++P +I   ++LEE
Sbjct: 120 LPESI-CECTSITILSLNDTTLTILPANIGLLVNLRVLDARENHLRTIPNSIAELKNLEE 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++ +LP  IG +L +L+   ++ N +  LP S++   +L  LD   N L  LP+
Sbjct: 179 LDLGQNEIEELPQKIG-KLTSLREFYVDTNFLQSLPDSISDCRNLDQLDVSDNRLSRLPD 237

Query: 122 DLENLINLEVLNISQN--------------FQYLET-------LPYSIGLLMSLVELDVS 160
           +L N+ +L  LNIS N               Q L+        L   IG   SL E+ + 
Sbjct: 238 NLGNMTSLTDLNISSNEIIELPSSIGNLKRLQMLKAERNSLTQLAPEIGQCQSLTEMYLG 297

Query: 161 YNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            N ++ LPD+IG LR+L  L+++ N L   P
Sbjct: 298 QNYLSDLPDTIGDLRQLTTLNVDCNNLSEIP 328



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 97/191 (50%), Gaps = 24/191 (12%)

Query: 25  CLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLK 84
           CLP  +GC  ++  +D S + L+++P  I   R LE+LN   N +++L D   F L  L+
Sbjct: 6   CLP--MGCQRQVDSVDRSSSNLQAIPTDIFRFRKLEDLNLTMNNIKEL-DRRLFTLRRLR 62

Query: 85  TLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN---LINLE----------- 130
            L ++ N++ +LP  + HLT L  L+   N +  +PE L+N   L NL            
Sbjct: 63  VLDVSDNELSVLPPDIGHLTQLIELNLNRNTITDIPETLKNCKLLTNLHLNGNPFTRLPE 122

Query: 131 -------VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLE 183
                  +  +S N   L  LP +IGLL++L  LD   N + T+P+SI  L+ L++L L 
Sbjct: 123 SICECTSITILSLNDTTLTILPANIGLLVNLRVLDARENHLRTIPNSIAELKNLEELDLG 182

Query: 184 GNPLVSPPMDV 194
            N +   P  +
Sbjct: 183 QNEIEELPQKI 193



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 6/106 (5%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+++   L  +  L+V  N L  +P +IG    L VL +  N+L  LP TI  C ++  
Sbjct: 304 LPDTI-GDLRQLTTLNVDCNNLSEIPETIGNCKSLTVLSLRQNILTELPMTIGRCENMTV 362

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
           L+   NKL  LP T+   L  L+ L ++ N+     QS+  LT  R
Sbjct: 363 LDVASNKLPNLPFTVKV-LYKLQALWLSENQ----SQSILKLTEAR 403



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 31/56 (55%)

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           L  LP  IG L  L+EL+++ N IT +P+++   + L  L L GNP    P  + E
Sbjct: 71  LSVLPPDIGHLTQLIELNLNRNTITDIPETLKNCKLLTNLHLNGNPFTRLPESICE 126


>gi|410451738|ref|ZP_11305740.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014504|gb|EKO76634.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 438

 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 119/193 (61%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L ++  L +  NQL+ +P  IG L  L+ L ++ N L ++PK I N ++L+ 
Sbjct: 214 IPKEI-GQLQSLQGLTLSFNQLRTIPKEIGKLQNLQGLTLTSNGLATIPKEIGNLQNLKV 272

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + NKL  +P  IG  L +L+ L+++ N +  LP+ +  L +L+ L   +N L +LP+
Sbjct: 273 LYLDHNKLATIPQEIG-NLQSLQVLTLDRNLLAPLPKEIGKLQNLQRLALTVNALTTLPK 331

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++ NL NL+ LN++ N   L TLP  IG L +L EL + YN++ TLP  IG L+ L+ L+
Sbjct: 332 EIGNLQNLKELNLTSN--RLTTLPKEIGKLQNLQELHLDYNQLKTLPKEIGKLQSLEYLN 389

Query: 182 LEGNPLVSPPMDV 194
           L GNPL S P ++
Sbjct: 390 LNGNPLTSFPEEI 402



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/185 (38%), Positives = 113/185 (61%), Gaps = 4/185 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L N+  L + SN L  +P  IG L  LKVL +  N L ++P+ I N +SL+ 
Sbjct: 237 IPKEI-GKLQNLQGLTLTSNGLATIPKEIGNLQNLKVLYLDHNKLATIPQEIGNLQSLQV 295

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L  LP  IG +L NL+ L++  N +  LP+ + +L +L+ L+   N L +LP+
Sbjct: 296 LTLDRNLLAPLPKEIG-KLQNLQRLALTVNALTTLPKEIGNLQNLKELNLTSNRLTTLPK 354

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L NL+ L++  ++  L+TLP  IG L SL  L+++ N +T+ P+ IG L+ L+ LS
Sbjct: 355 EIGKLQNLQELHL--DYNQLKTLPKEIGKLQSLEYLNLNGNPLTSFPEEIGKLQNLKVLS 412

Query: 182 LEGNP 186
           L GNP
Sbjct: 413 LVGNP 417



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 119/205 (58%), Gaps = 8/205 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  NQL  +P  IG L  L+ LD+  N +  LP  I   +SL +LN +FN
Sbjct: 57  GQLQNLQGLNLWDNQLTTMPKEIGELQHLQKLDLGFNKITVLPNEIGQLQSLLDLNLSFN 116

Query: 68  KLRQLPDTIGFELINLKTLSINCN-KIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENL 126
           +L  +P  IG EL +L+ L +  N +++ LP+ +  L +L+ +D+  N L +LP+++  L
Sbjct: 117 QLTTIPKEIG-ELQHLQRLFLGFNHQLIALPKEIGKLQNLQEMDSSRNQLITLPKEIGEL 175

Query: 127 INLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
            +L+ L +  NF  L T+P  IG L +L  LD+  N++TT+P  IG L+ LQ L+L  N 
Sbjct: 176 QHLQRLFL--NFNQLTTVPQEIGNLQNLQRLDLDKNQLTTIPKEIGQLQSLQGLTLSFNQ 233

Query: 187 LVSPPMDVVE----QGLSAVKGYLS 207
           L + P ++ +    QGL+     L+
Sbjct: 234 LRTIPKEIGKLQNLQGLTLTSNGLA 258



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/215 (34%), Positives = 127/215 (59%), Gaps = 10/215 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           V VL +++ +L  LP  IG L  L+ L++  N L ++PK I   + L++L+  FNK+  L
Sbjct: 39  VRVLYLNAKKLTALPKEIGQLQNLQGLNLWDNQLTTMPKEIGELQHLQKLDLGFNKITVL 98

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLN-CLKSLPEDLENLINLEV 131
           P+ IG +L +L  L+++ N++  +P+ +  L  L+ L    N  L +LP+++  L NL+ 
Sbjct: 99  PNEIG-QLQSLLDLNLSFNQLTTIPKEIGELQHLQRLFLGFNHQLIALPKEIGKLQNLQE 157

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           ++ S+N   L TLP  IG L  L  L +++N++TT+P  IG L+ LQ+L L+ N L + P
Sbjct: 158 MDSSRN--QLITLPKEIGELQHLQRLFLNFNQLTTVPQEIGNLQNLQRLDLDKNQLTTIP 215

Query: 192 MDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKL 226
            ++ +  L +++G L+   N     PK+   +GKL
Sbjct: 216 KEIGQ--LQSLQG-LTLSFNQLRTIPKE---IGKL 244



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/178 (35%), Positives = 102/178 (57%), Gaps = 7/178 (3%)

Query: 17  DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTI 76
           DVH+     L  ++   ++++VL ++   L +LPK I   ++L+ LN   N+L  +P  I
Sbjct: 25  DVHT-----LNEALQNPTQVRVLYLNAKKLTALPKEIGQLQNLQGLNLWDNQLTTMPKEI 79

Query: 77  GFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQ 136
           G EL +L+ L +  NKI +LP  +  L SL  L+   N L ++P+++  L +L+ L +  
Sbjct: 80  G-ELQHLQKLDLGFNKITVLPNEIGQLQSLLDLNLSFNQLTTIPKEIGELQHLQRLFLGF 138

Query: 137 NFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           N Q +  LP  IG L +L E+D S N++ TLP  IG L+ LQ+L L  N L + P ++
Sbjct: 139 NHQLI-ALPKEIGKLQNLQEMDSSRNQLITLPKEIGELQHLQRLFLNFNQLTTVPQEI 195



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 63/109 (57%), Gaps = 2/109 (1%)

Query: 88  INCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYS 147
           ++   +  L ++L + T +RVL      L +LP+++  L NL+ LN+  N   L T+P  
Sbjct: 21  LDAEDVHTLNEALQNPTQVRVLYLNAKKLTALPKEIGQLQNLQGLNLWDN--QLTTMPKE 78

Query: 148 IGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           IG L  L +LD+ +NKIT LP+ IG L+ L  L+L  N L + P ++ E
Sbjct: 79  IGELQHLQKLDLGFNKITVLPNEIGQLQSLLDLNLSFNQLTTIPKEIGE 127


>gi|428310898|ref|YP_007121875.1| hypothetical protein Mic7113_2682 [Microcoleus sp. PCC 7113]
 gi|428252510|gb|AFZ18469.1| leucine-rich repeat (LRR) protein [Microcoleus sp. PCC 7113]
          Length = 1126

 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 84/222 (37%), Positives = 116/222 (52%), Gaps = 23/222 (10%)

Query: 10   LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
            L N+ VL +  NQL  LP  IG L+ L  LD+S N    LP  I N  +L  L  N  +L
Sbjct: 905  LTNLEVLYLSRNQLTALPKEIGNLTNLTELDLSENE-NVLPAEIGNLTNLRRLYLNRKQL 963

Query: 70   RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
              L   IG  L NLKTLS+  N+++ LP  +  LT L+ LD   N L+ LP ++ NL NL
Sbjct: 964  TVLVPEIG-NLTNLKTLSLKDNQLIALPPEIGKLTQLKWLDINKNQLRQLPPEIGNLTNL 1022

Query: 130  EVL------------------NISQNFQY---LETLPYSIGLLMSLVELDVSYNKITTLP 168
              L                  N+++   Y   L  LP  +G L +L+EL + YN++T LP
Sbjct: 1023 TELYLYDNQLTALPKEIGNLTNLTKLHLYKNKLMALPPEMGRLTNLIELYLDYNQLTALP 1082

Query: 169  DSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKM 210
              IG L  L +LS   N L+SP  ++V+QG  A+  YL E++
Sbjct: 1083 PEIGNLTNLTQLSFYNNQLISPSPEIVKQGTQAILAYLREQL 1124



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 109/187 (58%), Gaps = 4/187 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N   L++   QL  LP  IG L+ L  L ++ N L +LP  I N  +L  L+   N+
Sbjct: 742 QLTNQTSLNLAGKQLTELPKEIGNLTDLTWLYLNRNQLATLPPEIGNLINLRVLSLENNR 801

Query: 69  LRQLPDTIGFELINLKTLSINCN-KIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LP  IG  L +L+ L ++ N ++ +LP+ +++LT+L  L+   N LK LP+++ NL 
Sbjct: 802 LTKLPKEIG-NLSHLRGLYLSGNYQLKVLPKKISNLTNLTQLNLSSNQLKVLPKEIGNLT 860

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  LN+S N   L+ LP  IG L +L  LD++ N++T LP  IG L  L+ L L  N L
Sbjct: 861 NLTQLNLSSN--QLKVLPKEIGNLTNLTLLDLNGNQLTELPPEIGNLTNLEVLYLSRNQL 918

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 919 TALPKEI 925



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 102/173 (58%), Gaps = 4/173 (2%)

Query: 22  QLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELI 81
           QLK LP  I  L+ L  L++S N L+ LPK I N  +L +LN + N+L+ LP  IG  L 
Sbjct: 825 QLKVLPKKISNLTNLTQLNLSSNQLKVLPKEIGNLTNLTQLNLSSNQLKVLPKEIG-NLT 883

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL  L +N N++  LP  + +LT+L VL    N L +LP+++ NL NL  L++S+N    
Sbjct: 884 NLTLLDLNGNQLTELPPEIGNLTNLEVLYLSRNQLTALPKEIGNLTNLTELDLSEN---E 940

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP  IG L +L  L ++  ++T L   IG L  L+ LSL+ N L++ P ++
Sbjct: 941 NVLPAEIGNLTNLRRLYLNRKQLTVLVPEIGNLTNLKTLSLKDNQLIALPPEI 993



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 93/169 (55%), Gaps = 4/169 (2%)

Query: 27  PNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTL 86
           P  I  L+    L+++G  L  LPK I N   L  L  N N+L  LP  IG  LINL+ L
Sbjct: 737 PKEIFQLTNQTSLNLAGKQLTELPKEIGNLTDLTWLYLNRNQLATLPPEIG-NLINLRVL 795

Query: 87  SINCNKIVILPQSLTHLTSLRVLDARLNC-LKSLPEDLENLINLEVLNISQNFQYLETLP 145
           S+  N++  LP+ + +L+ LR L    N  LK LP+ + NL NL  LN+S N   L+ LP
Sbjct: 796 SLENNRLTKLPKEIGNLSHLRGLYLSGNYQLKVLPKKISNLTNLTQLNLSSN--QLKVLP 853

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             IG L +L +L++S N++  LP  IG L  L  L L GN L   P ++
Sbjct: 854 KEIGNLTNLTQLNLSSNQLKVLPKEIGNLTNLTLLDLNGNQLTELPPEI 902



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 111/210 (52%), Gaps = 27/210 (12%)

Query: 8    ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            + L N+  L++ SNQLK LP  IG L+ L  L++S N L+ LPK I N  +L  L+ N N
Sbjct: 834  SNLTNLTQLNLSSNQLKVLPKEIGNLTNLTQLNLSSNQLKVLPKEIGNLTNLTLLDLNGN 893

Query: 68   KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD---------ARLNCLKS 118
            +L +LP  IG  L NL+ L ++ N++  LP+ + +LT+L  LD         A +  L +
Sbjct: 894  QLTELPPEIG-NLTNLEVLYLSRNQLTALPKEIGNLTNLTELDLSENENVLPAEIGNLTN 952

Query: 119  L--------------PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
            L              PE + NL NL+ L++  N   L  LP  IG L  L  LD++ N++
Sbjct: 953  LRRLYLNRKQLTVLVPE-IGNLTNLKTLSLKDN--QLIALPPEIGKLTQLKWLDINKNQL 1009

Query: 165  TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
              LP  IG L  L +L L  N L + P ++
Sbjct: 1010 RQLPPEIGNLTNLTELYLYDNQLTALPKEI 1039



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 1/111 (0%)

Query: 8    ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             +L  +  LD++ NQL+ LP  IG L+ L  L +  N L +LPK I N  +L +L+   N
Sbjct: 994  GKLTQLKWLDINKNQLRQLPPEIGNLTNLTELYLYDNQLTALPKEIGNLTNLTKLHLYKN 1053

Query: 68   KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKS 118
            KL  LP  +G  L NL  L ++ N++  LP  + +LT+L  L    N L S
Sbjct: 1054 KLMALPPEMG-RLTNLIELYLDYNQLTALPPEIGNLTNLTQLSFYNNQLIS 1103


>gi|24216021|ref|NP_713502.1| hypothetical protein LA_3322 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075102|ref|YP_005989421.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
 gi|24197249|gb|AAN50520.1| putative lipoprotein [Leptospira interrogans serovar Lai str.
           56601]
 gi|353458893|gb|AER03438.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
          Length = 284

 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/184 (38%), Positives = 111/184 (60%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V +L++   +LK  P  IG L  L+ L +S N   +LPK IE  ++L+ L+   N+L+
Sbjct: 48  LGVRILNLSRQKLKTFPKEIGQLKNLQELHLSSNQFTTLPKEIEQLQNLKSLDLWDNQLK 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG +L NLK+L +  N++ ILP+ +  L +L+ L+   N LK+LP+++  L NL+
Sbjct: 108 TLPKEIG-KLQNLKSLDLGSNQLTILPKEIGQLQNLQKLNLWNNQLKTLPKEIGQLQNLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            +N+ +N   L TLP  IG L +L  L ++YN++T LP  IG L+ L+ L L  N L   
Sbjct: 167 KMNLDKN--RLNTLPNEIGQLQNLESLYLNYNQLTILPKEIGQLQNLESLYLNYNQLTML 224

Query: 191 PMDV 194
           P ++
Sbjct: 225 PQEI 228



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/197 (38%), Positives = 112/197 (56%), Gaps = 3/197 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQLK LP  IG L  LK LD+  N L  LPK I   ++L++LN   N
Sbjct: 91  EQLQNLKSLDLWDNQLKTLPKEIGKLQNLKSLDLGSNQLTILPKEIGQLQNLQKLNLWNN 150

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG +L NL+ ++++ N++  LP  +  L +L  L    N L  LP+++  L 
Sbjct: 151 QLKTLPKEIG-QLQNLQKMNLDKNRLNTLPNEIGQLQNLESLYLNYNQLTILPKEIGQLQ 209

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NLE L +  N+  L  LP  IG L +L  L + YN++TTLP  IG L+ L++L L+ N  
Sbjct: 210 NLESLYL--NYNQLTMLPQEIGQLQNLEGLYLKYNQLTTLPKEIGRLQNLKRLYLKYNQF 267

Query: 188 VSPPMDVVEQGLSAVKG 204
            S   + +++ L    G
Sbjct: 268 SSKEKEKIQKLLPKYPG 284



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + SNQ   LP  I  L  LK LD+  N L++LPK I   ++L+ L+   N
Sbjct: 68  GQLKNLQELHLSSNQFTTLPKEIEQLQNLKSLDLWDNQLKTLPKEIGKLQNLKSLDLGSN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L++  N++  LP+ +  L +L+ ++   N L +LP ++  L 
Sbjct: 128 QLTILPKEIG-QLQNLQKLNLWNNQLKTLPKEIGQLQNLQKMNLDKNRLNTLPNEIGQLQ 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NLE L +  N+  L  LP  IG L +L  L ++YN++T LP  IG L+ L+ L L+ N L
Sbjct: 187 NLESLYL--NYNQLTILPKEIGQLQNLESLYLNYNQLTMLPQEIGQLQNLEGLYLKYNQL 244

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 245 TTLPKEI 251



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 23/121 (19%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY--------------- 140
           L ++L +   +R+L+     LK+ P+++  L NL+ L++S N Q+               
Sbjct: 40  LTKALQNPLGVRILNLSRQKLKTFPKEIGQLKNLQELHLSSN-QFTTLPKEIEQLQNLKS 98

Query: 141 -------LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMD 193
                  L+TLP  IG L +L  LD+  N++T LP  IG L+ LQKL+L  N L + P +
Sbjct: 99  LDLWDNQLKTLPKEIGKLQNLKSLDLGSNQLTILPKEIGQLQNLQKLNLWNNQLKTLPKE 158

Query: 194 V 194
           +
Sbjct: 159 I 159


>gi|45656720|ref|YP_000806.1| hypothetical protein LIC10829 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421084297|ref|ZP_15545160.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102948|ref|ZP_15563550.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599956|gb|AAS69443.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367263|gb|EKP22649.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410433197|gb|EKP77545.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 402

 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 90/269 (33%), Positives = 143/269 (53%), Gaps = 30/269 (11%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L+++ NQL  LP  IG L  L+ L++S N ++++PK IE  + L+ L    N+L  
Sbjct: 3   NLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTT 62

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L  L+ L +  N++  LPQ +  L +L+ L+   N +K++P+++E L  L+ 
Sbjct: 63  LPQEIG-QLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQS 121

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N   L TLP  IG L +L  LD+S N++TTLP  IG L+ LQ L L  N L + P
Sbjct: 122 LGLDNN--QLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLP 179

Query: 192 MDVVE----QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGALRNHR----SEE 243
            ++      Q L  V   L+   N           +G+L    T N  LRN+R    S+E
Sbjct: 180 QEIGHLQNLQELYLVSNQLTILPNE----------IGQLKNLQTLN--LRNNRLTTLSKE 227

Query: 244 RERFIMSDFRAIDGLAS-----PRHIGMF 267
            E+  + + +++D  ++     P+ IG  
Sbjct: 228 IEQ--LQNLKSLDLRSNQLTIFPKEIGQL 254



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 117/193 (60%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L N+  LD+ +N+L  LP  IG L  L+ LD+S N L +LP+ I + ++L+E
Sbjct: 132 LPQEI-GQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQE 190

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+L  LP+ IG +L NL+TL++  N++  L + +  L +L+ LD R N L   P+
Sbjct: 191 LYLVSNQLTILPNEIG-QLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPK 249

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L NL+VL++  N   L TLP  IG L +L  LD+  N++TTLP  I  L+ LQ L 
Sbjct: 250 EIGQLKNLQVLDLGSN--QLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLD 307

Query: 182 LEGNPLVSPPMDV 194
           L  N L + P ++
Sbjct: 308 LSYNQLKTLPKEI 320



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 114/193 (59%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L  +  L + +NQL  LP  IG L  L+ LD+S N L +LP+ I   ++L+ 
Sbjct: 109 IPKEI-EKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQS 167

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L  LP  IG  L NL+ L +  N++ ILP  +  L +L+ L+ R N L +L +
Sbjct: 168 LDLSTNRLTTLPQEIGH-LQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSK 226

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++E L NL+ L++  N   L   P  IG L +L  LD+  N++TTLP+ IG L+ LQ L 
Sbjct: 227 EIEQLQNLKSLDLRSN--QLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLD 284

Query: 182 LEGNPLVSPPMDV 194
           L+ N L + P ++
Sbjct: 285 LDSNQLTTLPQEI 297



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 128/226 (56%), Gaps = 9/226 (3%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +   L N+  L + SNQL  LPN IG L  L+ L++  N L +L K IE  ++L+ 
Sbjct: 178 LPQEI-GHLQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKS 236

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+L   P  IG +L NL+ L +  N++  LP+ +  L +L+ LD   N L +LP+
Sbjct: 237 LDLRSNQLTIFPKEIG-QLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQ 295

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +++ L NL++L++S  +  L+TLP  I  L +L  L + YN++T LP  IG L+ L+ L 
Sbjct: 296 EIKQLKNLQLLDLS--YNQLKTLPKEIEQLKNLQTLYLGYNQLTVLPKEIGQLQNLKVLF 353

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
           L  N L + P ++       +K      +NN+  S ++K  + KL+
Sbjct: 354 LNNNQLTTLPKEI-----GQLKNLQELYLNNNQLSIEEKERIRKLL 394



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 111/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++ +NQ+K +P  I  L KL+ L +  N L +LP+ I   + L+ L    N
Sbjct: 22  GQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKN 81

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NLK+L+++ N+I  +P+ +  L  L+ L    N L +LP+++  L 
Sbjct: 82  QLTTLPQEIG-QLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQ 140

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++S N   L TLP  IG L +L  LD+S N++TTLP  IG L+ LQ+L L  N L
Sbjct: 141 NLQSLDLSTN--RLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSNQL 198

Query: 188 VSPPMDV 194
              P ++
Sbjct: 199 TILPNEI 205



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 114/188 (60%), Gaps = 4/188 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L  +  L + +NQL  LP  IG L KL+ L +  N L +LP+ I   ++L+ 
Sbjct: 40  IPKEI-EKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKS 98

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN ++N+++ +P  I  +L  L++L ++ N++  LPQ +  L +L+ LD   N L +LP+
Sbjct: 99  LNLSYNQIKTIPKEIE-KLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQ 157

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L NL+ L++S N   L TLP  IG L +L EL +  N++T LP+ IG L+ LQ L+
Sbjct: 158 EIGQLQNLQSLDLSTN--RLTTLPQEIGHLQNLQELYLVSNQLTILPNEIGQLKNLQTLN 215

Query: 182 LEGNPLVS 189
           L  N L +
Sbjct: 216 LRNNRLTT 223


>gi|429961278|gb|ELA40823.1| hypothetical protein VICG_02141, partial [Vittaforma corneae ATCC
           50505]
          Length = 235

 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/191 (41%), Positives = 114/191 (59%), Gaps = 3/191 (1%)

Query: 4   ESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELN 63
           +S   RL+ +  L++ SN+L+ LP  IG L  L+ LD+S N L  LP  I+  +SL+ L 
Sbjct: 29  DSNVKRLVGLQCLNLRSNRLRILPIEIGELWNLQELDLSWNKLRQLPADIKRLKSLQRLY 88

Query: 64  ANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDL 123
            +FNKLR LP  I  EL NL+ L  + N++  LP  + +L +L  L  R N L+SLP+ +
Sbjct: 89  ISFNKLRVLPCEI-VELWNLQELYASYNRLESLPAEIGNLKNLTKLYLRSNVLRSLPDGI 147

Query: 124 ENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLE 183
             LI+++ L++S N   L +L   IG L SL EL  SYN++ +LP  IG L+ L KL L 
Sbjct: 148 GELISIQGLDLSWN--KLRSLSAEIGKLKSLQELYASYNRLESLPVEIGNLKNLTKLFLR 205

Query: 184 GNPLVSPPMDV 194
            N L S P ++
Sbjct: 206 SNVLRSLPDEI 216



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 66/175 (37%), Positives = 104/175 (59%), Gaps = 3/175 (1%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           S+ +  + +++  L  L+ L++  N L  LP  I    +L+EL+ ++NKLRQLP  I   
Sbjct: 22  SHGITSIDSNVKRLVGLQCLNLRSNRLRILPIEIGELWNLQELDLSWNKLRQLPADIK-R 80

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+ L I+ NK+ +LP  +  L +L+ L A  N L+SLP ++ NL NL  L +  N  
Sbjct: 81  LKSLQRLYISFNKLRVLPCEIVELWNLQELYASYNRLESLPAEIGNLKNLTKLYLRSNV- 139

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L +LP  IG L+S+  LD+S+NK+ +L   IG L+ LQ+L    N L S P+++
Sbjct: 140 -LRSLPDGIGELISIQGLDLSWNKLRSLSAEIGKLKSLQELYASYNRLESLPVEI 193



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 6/124 (4%)

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L+ L+ L++  N++ ILP  +  L +L+ LD   N L+ LP D++ L +L+ L IS  F 
Sbjct: 35  LVGLQCLNLRSNRLRILPIEIGELWNLQELDLSWNKLRQLPADIKRLKSLQRLYIS--FN 92

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE--- 196
            L  LP  I  L +L EL  SYN++ +LP  IG L+ L KL L  N L S P  + E   
Sbjct: 93  KLRVLPCEIVELWNLQELYASYNRLESLPAEIGNLKNLTKLYLRSNVLRSLPDGIGELIS 152

Query: 197 -QGL 199
            QGL
Sbjct: 153 IQGL 156



 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 2/81 (2%)

Query: 116 LKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLR 175
           + S+  +++ L+ L+ LN+  N   L  LP  IG L +L ELD+S+NK+  LP  I  L+
Sbjct: 25  ITSIDSNVKRLVGLQCLNLRSN--RLRILPIEIGELWNLQELDLSWNKLRQLPADIKRLK 82

Query: 176 KLQKLSLEGNPLVSPPMDVVE 196
            LQ+L +  N L   P ++VE
Sbjct: 83  SLQRLYISFNKLRVLPCEIVE 103


>gi|428210576|ref|YP_007083720.1| Leucine Rich Repeat (LRR)-containing protein [Oscillatoria
           acuminata PCC 6304]
 gi|427998957|gb|AFY79800.1| Leucine Rich Repeat (LRR)-containing protein [Oscillatoria
           acuminata PCC 6304]
          Length = 298

 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 81/217 (37%), Positives = 116/217 (53%), Gaps = 17/217 (7%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  LD+  NQLK LP  I  LS L  LD+  N L +LP  I    +L+E N   N+
Sbjct: 83  QLSNLTELDLWGNQLKVLPPEIWQLSNLTELDLQDNQLSALPSEIWQLFNLKEFNLVGNQ 142

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG +L NL  L +  N++ +LP  +  L++L  L  + N L  LP ++  L N
Sbjct: 143 LSVLPPEIG-QLSNLTKLYLQNNQLTVLPPEIGQLSNLTKLYLQDNQLTVLPPEIGELSN 201

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLE----- 183
           L  L +  N   L  LP  IG L  L+EL++  N+++ LP  IG LR L  + LE     
Sbjct: 202 LTELYLQNN--QLSVLPPEIGNLTHLIELNLVGNELSALPPEIGHLRMLAAIILEENPEE 259

Query: 184 ---------GNPLVSPPMDVVEQGLSAVKGYLSEKMN 211
                    GNPL SPP ++++QG+ A   YL E+++
Sbjct: 260 WWYDGLYLGGNPLTSPPPEILKQGIDATLAYLREQLH 296



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 97/184 (52%), Gaps = 3/184 (1%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           V  L++    L  L + I  L+KL  LD+  N L +LP  I     L  LN   N+L+ L
Sbjct: 18  VTSLNLSGKGLTTLASEIRQLTKLTRLDLYNNQLSALPSEIGQLSHLTRLNLGDNQLKVL 77

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P  I ++L NL  L +  N++ +LP  +  L++L  LD + N L +LP ++  L NL+  
Sbjct: 78  PPEI-WQLSNLTELDLWGNQLKVLPPEIWQLSNLTELDLQDNQLSALPSEIWQLFNLKEF 136

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
           N+  N   L  LP  IG L +L +L +  N++T LP  IG L  L KL L+ N L   P 
Sbjct: 137 NLVGN--QLSVLPPEIGQLSNLTKLYLQNNQLTVLPPEIGQLSNLTKLYLQDNQLTVLPP 194

Query: 193 DVVE 196
           ++ E
Sbjct: 195 EIGE 198


>gi|418686455|ref|ZP_13247621.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410738888|gb|EKQ83620.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 380

 Score =  110 bits (276), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 115/186 (61%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L + SNQL  LPN IG L  L+VL+++ N  +++PK I   ++L+ LN  +N+
Sbjct: 113 KLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLGYNQ 172

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP+ IG +L NL++L +  N++  LP  +  L +L+ L    N L +LP ++  L N
Sbjct: 173 LTALPNEIG-QLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQLQN 231

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +  N   L TLP  IG L +L +L++ YN++ TLP  IG L+KL+ LSL GN L 
Sbjct: 232 LQSLYLGSNL--LTTLPKEIGQLQNLQQLELDYNRLYTLPKEIGRLKKLRTLSLWGNRLK 289

Query: 189 SPPMDV 194
           + P ++
Sbjct: 290 TLPNEI 295



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 106/187 (56%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L+++ NQL  LP  IG L  L+ L++  N    LPK +E   +L+EL    N
Sbjct: 66  GKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+ L +  N+   +P+ +  L +L+ L+   N L +LP ++  L 
Sbjct: 126 QLTTLPNEIG-QLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLGYNQLTALPNEIGQLK 184

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +  N   L  LP  IG L +L  L +S N++TTLP+ IG L+ LQ L L  N L
Sbjct: 185 NLQSLYLGSN--QLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNLL 242

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 243 TTLPKEI 249



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 106/184 (57%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++ +N+ K LP  IG L  L+ L+++ N L  LPK I   ++L +LN   N+  
Sbjct: 46  LDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFT 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  +  +L NLK L +  N++  LP  +  L +LRVL+   N  K++P+++  L NL+
Sbjct: 106 ILPKEVE-KLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQ 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+  N   L  LP  IG L +L  L +  N++T LP+ IG L+ LQ L L  N L + 
Sbjct: 165 TLNLGYN--QLTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTL 222

Query: 191 PMDV 194
           P ++
Sbjct: 223 PNEI 226



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/211 (36%), Positives = 112/211 (53%), Gaps = 27/211 (12%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L N+  L++  NQL  LPN IG L  L+ L +  N L +LP  I   ++L+ 
Sbjct: 153 IPKEI-GQLKNLQTLNLGYNQLTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQS 211

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSI-----------------------NCNKIVILPQ 98
           L  + N+L  LP+ IG +L NL++L +                       + N++  LP+
Sbjct: 212 LYLSTNRLTTLPNEIG-QLQNLQSLYLGSNLLTTLPKEIGQLQNLQQLELDYNRLYTLPK 270

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
            +  L  LR L    N LK+LP ++  L NL+ L++S N   L+TLP  I  L +L ELD
Sbjct: 271 EIGRLKKLRTLSLWGNRLKTLPNEIGQLKNLQRLHLSYN--QLKTLPNEIEQLQNLQELD 328

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           +  N +TTLP  IG L+ LQKL L  N L S
Sbjct: 329 LRNNLLTTLPKGIGQLKNLQKLDLRNNELFS 359


>gi|350422758|ref|XP_003493273.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Bombus
           impatiens]
          Length = 610

 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/182 (39%), Positives = 109/182 (59%), Gaps = 3/182 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L ++V   ++ N+L  LP  IGCL  L+ L +S N L SLP T+EN +SL  L+   NKL
Sbjct: 151 LTHLVEFYLYGNKLVTLPPEIGCLGNLETLALSENSLTSLPNTLENLKSLRVLDLRHNKL 210

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++PD + ++L NL TL +  N++  +  ++ +LT+L +L  R N ++ LP  +  L+NL
Sbjct: 211 SEIPDVV-YKLTNLTTLFLRFNRVRYVSDNIRNLTNLTMLSLRENKIRELPAGIGKLVNL 269

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
              +IS N  +LE LP  IG  + L  LD+ +N++  +PD+IG L  L +L L  N L S
Sbjct: 270 ITFDISHN--HLEHLPEEIGNCVQLSTLDLQHNELLDIPDTIGRLVSLTRLGLRYNRLTS 327

Query: 190 PP 191
            P
Sbjct: 328 IP 329



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 110/206 (53%), Gaps = 27/206 (13%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           +N+V L++ +NQL  +P+ I CL  L+VL +S NLL+ +P +I N R L  L+   NK+ 
Sbjct: 431 VNMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASIANLRKLRVLDLEENKIE 490

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ IGF L +L+ L +  N++  LP+++ HLT+L  L    N L  LPE++  L NL+
Sbjct: 491 SLPNEIGF-LRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYLPEEIGTLENLD 549

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L ++ N   L  LP+ + L  +L               SI        +S+E  PL   
Sbjct: 550 SLYVNDNAN-LHNLPFELALCTNL---------------SI--------MSIENCPLSHI 585

Query: 191 PMDVVEQGLSAVKGYLSEKMNNDHKS 216
           P ++V  G S V  +L  KM   ++S
Sbjct: 586 PPEIVAGGPSLVIQFL--KMQGPYRS 609



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 104/196 (53%), Gaps = 5/196 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +    + +  LD+  N+L  +P++IG L  L  L +  N L S+PK++ NC+ ++E
Sbjct: 282 LPEEI-GNCVQLSTLDLQHNELLDIPDTIGRLVSLTRLGLRYNRLTSIPKSLANCKLMDE 340

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ-SLTHLTSLRVLDARLNCLKSLP 120
            +   N++ QLPD +   L +L T++++ N     P       T++  ++   N +  +P
Sbjct: 341 FSVEGNQVSQLPDGLLASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIP 400

Query: 121 EDL-ENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
             +     NL  LN+ +N   L  LP  IG  +++VEL++  N++T +PD I CL+ L+ 
Sbjct: 401 YAIFSRAKNLAKLNMKEN--QLTALPLDIGTWVNMVELNLGTNQLTKIPDDIQCLQNLEV 458

Query: 180 LSLEGNPLVSPPMDVV 195
           L L  N L   P  + 
Sbjct: 459 LILSNNLLKRIPASIA 474



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 93/179 (51%), Gaps = 26/179 (14%)

Query: 36  LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           L+ LD+S + +  LP T+ +   L E     NKL  LP  IG  L NL+TL+++ N +  
Sbjct: 131 LERLDLSKSNITHLPSTVRDLTHLVEFYLYGNKLVTLPPEIGC-LGNLETLALSENSLTS 189

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLP-----------------------EDLENLINLEVL 132
           LP +L +L SLRVLD R N L  +P                       +++ NL NL +L
Sbjct: 190 LPNTLENLKSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFNRVRYVSDNIRNLTNLTML 249

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           ++ +N   +  LP  IG L++L+  D+S+N +  LP+ IG   +L  L L+ N L+  P
Sbjct: 250 SLREN--KIRELPAGIGKLVNLITFDISHNHLEHLPEEIGNCVQLSTLDLQHNELLDIP 306



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 101/195 (51%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNS-IGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +P+ L A L ++  + +  N     P+      + +  +++  N ++ +P  I    ++L
Sbjct: 351 LPDGLLASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYAIFSRAKNL 410

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP  IG   +N+  L++  N++  +P  +  L +L VL    N LK +
Sbjct: 411 AKLNMKENQLTALPLDIG-TWVNMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRI 469

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  + NL  L VL++ +N   +E+LP  IG L  L +L +  N++T+LP +IG L  L  
Sbjct: 470 PASIANLRKLRVLDLEEN--KIESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTY 527

Query: 180 LSLEGNPLVSPPMDV 194
           LS+  N L   P ++
Sbjct: 528 LSVGENNLNYLPEEI 542


>gi|418677876|ref|ZP_13239150.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|400321066|gb|EJO68926.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
          Length = 285

 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++ +NQL  LP  IG L   + L +S N L +LPK I   ++L EL  N N
Sbjct: 66  GQLQNLQWLNLVTNQLTTLPEEIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +    P  IG +L NL+ L++  N++  LP  +  L +LR L    N LK++PE+   L 
Sbjct: 126 QFTAFPKEIG-QLKNLQQLNLYANQLKTLPNEIGQLKNLRELHLSYNQLKTVPEETGQLK 184

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L+++ N   L TLP  I  L +L EL +SYN++ TL   IG L+ L+KLSL  N L
Sbjct: 185 NLQMLSLNAN--QLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQL 242

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 243 TTLPKEI 249



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 98/159 (61%), Gaps = 3/159 (1%)

Query: 36  LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           ++VLD+S   L++LPK I   ++L+ LN   N+L  LP+ IG +L N +TL ++ N++  
Sbjct: 48  VRVLDLSEQKLKTLPKEIGQLQNLQWLNLVTNQLTTLPEEIG-QLQNFQTLVLSKNRLTT 106

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           LP+ +  L +LR L    N   + P+++  L NL+ LN+  N   L+TLP  IG L +L 
Sbjct: 107 LPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYAN--QLKTLPNEIGQLKNLR 164

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           EL +SYN++ T+P+  G L+ LQ LSL  N L + P ++
Sbjct: 165 ELHLSYNQLKTVPEETGQLKNLQMLSLNANQLTTLPNEI 203



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 58/99 (58%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVLD     LK+LP+++  L NL+ LN+  N   L TLP  IG L +  
Sbjct: 38  LTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQWLNLVTN--QLTTLPEEIGQLQNFQ 95

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L +S N++TTLP  IG L+ L++L L  N   + P ++
Sbjct: 96  TLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEI 134



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 2/92 (2%)

Query: 103 LTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYN 162
            T ++  + +      L + L+N +++ VL++S+  Q L+TLP  IG L +L  L++  N
Sbjct: 22  FTFVQAEEGKSKAYTDLTKALKNPLDVRVLDLSE--QKLKTLPKEIGQLQNLQWLNLVTN 79

Query: 163 KITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           ++TTLP+ IG L+  Q L L  N L + P ++
Sbjct: 80  QLTTLPEEIGQLQNFQTLVLSKNRLTTLPKEI 111



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 1/75 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE  T +L N+ +L +++NQL  LPN I  L  L+ L +S N L++L   I   ++L++
Sbjct: 176 VPEE-TGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKK 234

Query: 62  LNANFNKLRQLPDTI 76
           L+   N+L  LP  I
Sbjct: 235 LSLRDNQLTTLPKEI 249


>gi|417781236|ref|ZP_12428988.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410778487|gb|EKR63113.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 400

 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 110/179 (61%), Gaps = 3/179 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           VL + +NQL+ LP  IG L KL+VL ++ N L++LPK IE  + L EL++  N L  LP 
Sbjct: 113 VLYLDNNQLQALPKEIGKLKKLQVLYLNDNQLKTLPKEIEYLQKLRELDSTNNPLTTLPK 172

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            IG+ L NL+ L ++ N++  LP+ +  L +L+VL    + L +LP D+  L NL+ L +
Sbjct: 173 EIGY-LKNLEELILSNNELTTLPKEIGKLKNLQVLYLGADLLTTLPNDIGYLKNLQKLYL 231

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMD 193
             N   L TLP  IG L +L EL +S N++ TLP+ IG L+ LQ L L GN L + P +
Sbjct: 232 --NTGRLTTLPNDIGYLKNLQELYLSDNQLKTLPNDIGKLKNLQVLHLSGNQLTTLPKE 288



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/183 (39%), Positives = 111/183 (60%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L + +N+L  LP  IG L  L+VL +  +LL +LP  I   ++L++L  N  +L  
Sbjct: 179 NLEELILSNNELTTLPKEIGKLKNLQVLYLGADLLTTLPNDIGYLKNLQKLYLNTGRLTT 238

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ IG+ L NL+ L ++ N++  LP  +  L +L+VL    N L +LP++   L +L  
Sbjct: 239 LPNDIGY-LKNLQELYLSDNQLKTLPNDIGKLKNLQVLHLSGNQLTTLPKEFGKLQSLRE 297

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LN+S N   L TLP   G L SL EL++S N++TTLP  IG L+ L++L+L GN L + P
Sbjct: 298 LNLSGN--QLTTLPKEFGKLQSLRELNLSGNQLTTLPKEIGKLQSLRELNLSGNQLTTLP 355

Query: 192 MDV 194
            ++
Sbjct: 356 KEI 358



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 110/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L + +NQL+ LP  IG L KL+VL ++ N L ++P  I   + L+ L  + N
Sbjct: 60  GELQNLTKLYLSNNQLQALPKEIGKLKKLQVLTLNNNQLTTIPNEIGELKKLQVLYLDNN 119

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG +L  L+ L +N N++  LP+ + +L  LR LD+  N L +LP+++  L 
Sbjct: 120 QLQALPKEIG-KLKKLQVLYLNDNQLKTLPKEIEYLQKLRELDSTNNPLTTLPKEIGYLK 178

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NLE L +S N   L TLP  IG L +L  L +  + +TTLP+ IG L+ LQKL L    L
Sbjct: 179 NLEELILSNN--ELTTLPKEIGKLKNLQVLYLGADLLTTLPNDIGYLKNLQKLYLNTGRL 236

Query: 188 VSPPMDV 194
            + P D+
Sbjct: 237 TTLPNDI 243



 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 109/179 (60%), Gaps = 3/179 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL + ++ L  LPN IG L  L+ L ++   L +LP  I   ++L+EL  + N
Sbjct: 198 GKLKNLQVLYLGADLLTTLPNDIGYLKNLQKLYLNTGRLTTLPNDIGYLKNLQELYLSDN 257

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP+ IG +L NL+ L ++ N++  LP+    L SLR L+   N L +LP++   L 
Sbjct: 258 QLKTLPNDIG-KLKNLQVLHLSGNQLTTLPKEFGKLQSLRELNLSGNQLTTLPKEFGKLQ 316

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           +L  LN+S N   L TLP  IG L SL EL++S N++TTLP  IG L+ LQ+L L+  P
Sbjct: 317 SLRELNLSGN--QLTTLPKEIGKLQSLRELNLSGNQLTTLPKEIGHLKNLQELYLDDIP 373



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 110/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  + VL +++NQL  +PN IG L KL+VL +  N L++LPK I   + L+ L  N N
Sbjct: 83  GKLKKLQVLTLNNNQLTTIPNEIGELKKLQVLYLDNNQLQALPKEIGKLKKLQVLYLNDN 142

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  I + L  L+ L    N +  LP+ + +L +L  L    N L +LP+++  L 
Sbjct: 143 QLKTLPKEIEY-LQKLRELDSTNNPLTTLPKEIGYLKNLEELILSNNELTTLPKEIGKLK 201

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+VL +  +   L TLP  IG L +L +L ++  ++TTLP+ IG L+ LQ+L L  N L
Sbjct: 202 NLQVLYLGADL--LTTLPNDIGYLKNLQKLYLNTGRLTTLPNDIGYLKNLQELYLSDNQL 259

Query: 188 VSPPMDV 194
            + P D+
Sbjct: 260 KTLPNDI 266



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/183 (39%), Positives = 108/183 (59%), Gaps = 5/183 (2%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V +L +H+N+   LP  IG L  L  L +S N L++LPK I   + L+ L  N N+L  
Sbjct: 43  DVRILSLHNNE--TLPKEIGELQNLTKLYLSNNQLQALPKEIGKLKKLQVLTLNNNQLTT 100

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           +P+ IG EL  L+ L ++ N++  LP+ +  L  L+VL    N LK+LP+++E L  L  
Sbjct: 101 IPNEIG-ELKKLQVLYLDNNQLQALPKEIGKLKKLQVLYLNDNQLKTLPKEIEYLQKLRE 159

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L+ + N   L TLP  IG L +L EL +S N++TTLP  IG L+ LQ L L  + L + P
Sbjct: 160 LDSTNN--PLTTLPKEIGYLKNLEELILSNNELTTLPKEIGKLKNLQVLYLGADLLTTLP 217

Query: 192 MDV 194
            D+
Sbjct: 218 NDI 220



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 4/79 (5%)

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
           +L E L N  ++ +L++  N    ETLP  IG L +L +L +S N++  LP  IG L+KL
Sbjct: 33  NLTEALRNATDVRILSLHNN----ETLPKEIGELQNLTKLYLSNNQLQALPKEIGKLKKL 88

Query: 178 QKLSLEGNPLVSPPMDVVE 196
           Q L+L  N L + P ++ E
Sbjct: 89  QVLTLNNNQLTTIPNEIGE 107


>gi|300868028|ref|ZP_07112666.1| Small GTP-binding protein (fragment) [Oscillatoria sp. PCC 6506]
 gi|300333948|emb|CBN57844.1| Small GTP-binding protein (fragment) [Oscillatoria sp. PCC 6506]
          Length = 376

 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 123/205 (60%), Gaps = 4/205 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE++ A L  +  L +++NQL+ +P +I  L++L+ L +S N L ++P+ I +   L  
Sbjct: 173 VPETI-ASLTQLEWLYLNNNQLRKVPEAIASLTQLQRLSLSDNELTAVPEAIASLSQLRS 231

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N+L +LP+ I   L  L+ L +  N++  LP+++  LT L+ L    N L ++PE
Sbjct: 232 LNLSNNQLTELPEAIA-SLTQLQELYLVGNQLTELPEAIASLTQLQELYLVGNELTAVPE 290

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + +L  L+ L++S N   L  +P +I  L  L  LD+SYN++T +P++I  L +LQ+L 
Sbjct: 291 AIASLTQLQRLSLSDN--ELTAVPEAIASLTHLQGLDLSYNQLTQVPEAIASLSQLQELY 348

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYL 206
           L+ NPL        EQG+ AVK YL
Sbjct: 349 LDDNPLNPDLAAAYEQGIEAVKEYL 373



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 112/190 (58%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE++ A L  +  LD+  NQL  +P +I  LS+L++L++S N L  +P+ I +   L+ 
Sbjct: 35  VPEAI-ATLTQLQRLDLDCNQLTKVPEAIASLSQLQILNLSNNKLTEVPEAIASLSQLQT 93

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN  +NKL ++P+ I   L  L+ L ++ N++  +P+++  L+ L+ L+   N L  +PE
Sbjct: 94  LNLIYNKLTEVPEAIAT-LTQLQKLYLSNNQLTQVPEAIASLSQLQTLNLNFNQLTEVPE 152

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + +L  L  LN+S  +  L  +P +I  L  L  L ++ N++  +P++I  L +LQ+LS
Sbjct: 153 AIASLSQLRRLNLS--YNQLTEVPETIASLTQLEWLYLNNNQLRKVPEAIASLTQLQRLS 210

Query: 182 LEGNPLVSPP 191
           L  N L + P
Sbjct: 211 LSDNELTAVP 220



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 102/176 (57%), Gaps = 3/176 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+   +L  +P +I  L++L+ LD+  N L  +P+ I +   L+ LN + NKL ++P+ 
Sbjct: 25  LDLGYMELTEVPEAIATLTQLQRLDLDCNQLTKVPEAIASLSQLQILNLSNNKLTEVPEA 84

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           I   L  L+TL++  NK+  +P+++  LT L+ L    N L  +PE + +L  L+ LN+ 
Sbjct: 85  IA-SLSQLQTLNLIYNKLTEVPEAIATLTQLQKLYLSNNQLTQVPEAIASLSQLQTLNL- 142

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            NF  L  +P +I  L  L  L++SYN++T +P++I  L +L+ L L  N L   P
Sbjct: 143 -NFNQLTEVPEAIASLSQLRRLNLSYNQLTEVPETIASLTQLEWLYLNNNQLRKVP 197


>gi|418668210|ref|ZP_13229613.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756067|gb|EKR17694.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 379

 Score =  110 bits (275), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 131/227 (57%), Gaps = 11/227 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L N+  L++  NQ+K +P  I  L KL+ L +  N L +LP+ I   ++L+ 
Sbjct: 155 LPQEI-GQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQS 213

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L  LP  IG  L NL+ L +  N++ ILP  +  L +L+ L+ R N L +L +
Sbjct: 214 LDLSTNRLTTLPQEIGH-LQNLQDLYLVSNQLTILPNEIRQLKNLQTLNLRNNRLTTLSK 272

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++E L NL+ L++  N   L T P  IG L +L  LD+  N++TTLP+ IG L+ LQ L 
Sbjct: 273 EIEQLQNLKSLDLRSN--QLTTFPKGIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLD 330

Query: 182 LEGNPLVSPPMDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
           L+ N L + P ++ + Q L  +       +NN+  S ++K  + KL+
Sbjct: 331 LDSNQLTTLPQEIGQLQNLQEL------FLNNNQLSSQEKKRIRKLI 371



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 110/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L+++ NQL  LP  IG L  L+ L++S N ++++PK IE  + L+ L    N
Sbjct: 68  GKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L  L+ L +  N++  LPQ +  L +L+ L+   N +K++P+++E L 
Sbjct: 128 QLTTLPQEIG-QLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQ 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L +  N   L TLP  IG L +L  LD+S N++TTLP  IG L+ LQ L L  N L
Sbjct: 187 KLQSLGLDNN--QLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQL 244

Query: 188 VSPPMDV 194
              P ++
Sbjct: 245 TILPNEI 251



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 106/184 (57%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V  LD+ +N+ K LP  IG L  L+ L+++ N L  LPK I   ++L +LN + N+++
Sbjct: 48  LKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIK 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            +P  I  +L  L++L +  N++  LPQ +  L  L+ L    N L +LP+++  L NL+
Sbjct: 108 TIPKEIE-KLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLK 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+S  +  ++T+P  I  L  L  L +  N++TTLP  IG L+ LQ L L  N L + 
Sbjct: 167 SLNLS--YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTL 224

Query: 191 PMDV 194
           P ++
Sbjct: 225 PQEI 228



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R LD   N  K+LP+++  L NL+ LN+++N   L  LP  IG L +L 
Sbjct: 40  LAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKN--QLTILPKEIGQLKNLR 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +L++S N+I T+P  I  L+KLQ L L  N L + P ++
Sbjct: 98  KLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEI 136


>gi|418735840|ref|ZP_13292245.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
 gi|410748568|gb|EKR01467.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
          Length = 422

 Score =  110 bits (275), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 80/187 (42%), Positives = 113/187 (60%), Gaps = 4/187 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  NQLK LP  IG L  L  L+++ N L +LPK I N ++L EL    N
Sbjct: 175 GQLQNLRELYLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINN 234

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+   +    +  LP  + +L SLR L+   N + +LP+D+  L 
Sbjct: 235 ELTTLPKEIG-KLKNLQVSYLGA-LLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQ 292

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+VL +S+N   L TLP  IG L +L ELD+S N+ITTLP  IG L+ L++L+L GN L
Sbjct: 293 NLQVLYLSEN--QLATLPKEIGQLQNLRELDLSGNQITTLPKDIGELQSLRELNLSGNLL 350

Query: 188 VSPPMDV 194
            + P D+
Sbjct: 351 TTLPKDI 357



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 124/224 (55%), Gaps = 28/224 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  +  L + +NQL  LP  IG L KL+ LD++ NLL +LPK I   ++L EL+   N
Sbjct: 83  GKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNNLLTTLPKEIGQLQNLRELDLTNN 142

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG +L NL+ L ++ N++  LP+ +  L +LR L    N LK+LP+D+  L 
Sbjct: 143 QLKTLPKDIG-QLQNLRELYLDNNQLKTLPKDIGQLQNLRELYLDGNQLKTLPKDIGKLQ 201

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQ--------- 178
           NL  LN++ N   L TLP  IG L +L EL +  N++TTLP  IG L+ LQ         
Sbjct: 202 NLTELNLTNN--PLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNLQVSYLGALLT 259

Query: 179 -------------KLSLEGNPLVSPPMDVVE-QGLSAVKGYLSE 208
                        +L+L GN + + P D+ + Q L  +  YLSE
Sbjct: 260 TLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVL--YLSE 301



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/187 (41%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L + SNQLK LP  IG L K++ L +S N L +LPK I   + L EL+   N
Sbjct: 60  GELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNN 119

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP  IG +L NL+ L +  N++  LP+ +  L +LR L    N LK+LP+D+  L 
Sbjct: 120 LLTTLPKEIG-QLQNLRELDLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLPKDIGQLQ 178

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L +  N   L+TLP  IG L +L EL+++ N +TTLP  IG L+ L +L L  N L
Sbjct: 179 NLRELYLDGN--QLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNEL 236

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 237 TTLPKEI 243



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/183 (39%), Positives = 107/183 (58%), Gaps = 5/183 (2%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V +L +H+N+   LP  IG L  L  L +S N L++LPK I   + +E L+ + N+L  
Sbjct: 43  DVRILSLHNNE--TLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTT 100

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L  L+ L +  N +  LP+ +  L +LR LD   N LK+LP+D+  L NL  
Sbjct: 101 LPKDIG-KLKKLRELDLTNNLLTTLPKEIGQLQNLRELDLTNNQLKTLPKDIGQLQNLRE 159

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N   L+TLP  IG L +L EL +  N++ TLP  IG L+ L +L+L  NPL + P
Sbjct: 160 LYLDNN--QLKTLPKDIGQLQNLRELYLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLP 217

Query: 192 MDV 194
            D+
Sbjct: 218 KDI 220



 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 74/169 (43%), Positives = 102/169 (60%), Gaps = 8/169 (4%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVS--GNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           +N+L  LP  IG   KLK L VS  G LL +LP  I   +SL ELN + N++  LP  IG
Sbjct: 233 NNELTTLPKEIG---KLKNLQVSYLGALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIG 289

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
            +L NL+ L ++ N++  LP+ +  L +LR LD   N + +LP+D+  L +L  LN+S N
Sbjct: 290 -QLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGNQITTLPKDIGELQSLRELNLSGN 348

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
              L TLP  IG L SL EL++  N+ITT+P  IG L+ LQ L L+  P
Sbjct: 349 L--LTTLPKDIGKLQSLRELNLGGNQITTIPKEIGHLKNLQVLYLDDIP 395



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/191 (40%), Positives = 109/191 (57%), Gaps = 8/191 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + +NQLK LP  IG L  L+ L + GN L++LPK I   ++L ELN   N
Sbjct: 152 GQLQNLRELYLDNNQLKTLPKDIGQLQNLRELYLDGNQLKTLPKDIGKLQNLTELNLTNN 211

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRV--LDARLNCLKSLPEDLEN 125
            L  LP  IG  L NL  L +  N++  LP+ +  L +L+V  L A    L +LP D+  
Sbjct: 212 PLTTLPKDIG-NLKNLGELLLINNELTTLPKEIGKLKNLQVSYLGA---LLTTLPNDIGY 267

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L +L  LN+S N   + TLP  IG L +L  L +S N++ TLP  IG L+ L++L L GN
Sbjct: 268 LKSLRELNLSGN--QITTLPKDIGQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGN 325

Query: 186 PLVSPPMDVVE 196
            + + P D+ E
Sbjct: 326 QITTLPKDIGE 336



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 64/102 (62%), Gaps = 1/102 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL +  NQL  LP  IG L  L+ LD+SGN + +LPK I   +SL ELN + N
Sbjct: 289 GQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGNQITTLPKDIGELQSLRELNLSGN 348

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
            L  LP  IG +L +L+ L++  N+I  +P+ + HL +L+VL
Sbjct: 349 LLTTLPKDIG-KLQSLRELNLGGNQITTIPKEIGHLKNLQVL 389



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 4/77 (5%)

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
           +L E L+N  ++ +L++  N    ETLP  IG L +L EL +S N++ TLP  IG L+K+
Sbjct: 33  NLTEALQNPTDVRILSLHNN----ETLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKI 88

Query: 178 QKLSLEGNPLVSPPMDV 194
           ++LSL  N L + P D+
Sbjct: 89  ERLSLSNNQLTTLPKDI 105


>gi|428211272|ref|YP_007084416.1| Leucine Rich Repeat (LRR)-containing protein [Oscillatoria
           acuminata PCC 6304]
 gi|427999653|gb|AFY80496.1| Leucine Rich Repeat (LRR)-containing protein [Oscillatoria
           acuminata PCC 6304]
          Length = 922

 Score =  110 bits (275), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 81/218 (37%), Positives = 107/218 (49%), Gaps = 31/218 (14%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           V  L++    L  LP  IG LS L VLD+SGN L +LP  I     L  L    N+L  L
Sbjct: 18  VTALNLLWKGLTKLPPEIGQLSNLTVLDLSGNQLSALPPEIGQLSHLTGLYLWHNQLSAL 77

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P  IG +L NL  LS++ N++  LP  +  L++L  LD   N L +LP            
Sbjct: 78  PPEIG-QLSNLIRLSLDRNQLSALPLEIGQLSNLTQLDLGDNQLSALP------------ 124

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
                          IG L  L +LD+  N+++ LP  IG L  L  L L GNPL SPP 
Sbjct: 125 -------------LEIGQLSHLTQLDLGDNQLSALPPEIGQLSNLTTLELSGNPLTSPPP 171

Query: 193 DVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYG 230
           ++VEQG  AV  YL E+++      K+  WV KL+  G
Sbjct: 172 EIVEQGTKAVLAYLREQLHA-----KQPQWVSKLIVVG 204



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 1/102 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N++ L +  NQL  LP  IG LS L  LD+  N L +LP  I     L +L+   N
Sbjct: 82  GQLSNLIRLSLDRNQLSALPLEIGQLSNLTQLDLGDNQLSALPLEIGQLSHLTQLDLGDN 141

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           +L  LP  IG +L NL TL ++ N +   P  +    +  VL
Sbjct: 142 QLSALPPEIG-QLSNLTTLELSGNPLTSPPPEIVEQGTKAVL 182


>gi|421111699|ref|ZP_15572172.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410802895|gb|EKS09040.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 360

 Score =  110 bits (275), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 80/217 (36%), Positives = 116/217 (53%), Gaps = 32/217 (14%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A L N+  LD+  NQL  LP  IG L  L+ L + GNLL +LP+ I + ++L+EL+ + N
Sbjct: 65  ANLKNLRKLDLRYNQLTTLPKEIGQLHNLQSLSLYGNLLSTLPEEIGHLKNLKELSLSHN 124

Query: 68  KLRQLPDTIG------------------------------FELINLKTLSINCNKIVILP 97
            L  LP+ IG                               +L NLK L++  N++  LP
Sbjct: 125 LLITLPENIGRLQNLEVLDLSVNLRSLIFRSEEIGISEEIGDLQNLKELNLTGNRLTTLP 184

Query: 98  QSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVEL 157
           + +  L SL  LD   N L  LP+++  L NL+ L++  N   L T P  IG L SL +L
Sbjct: 185 KEIGKLQSLEKLDLSENSLAILPKEIGRLQNLKRLSLKGN--RLTTFPKEIGKLQSLEKL 242

Query: 158 DVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           D+S N ++TLP  IG L+ L++LSLEGN L + P ++
Sbjct: 243 DLSNNSLSTLPKEIGRLKNLRELSLEGNRLSTLPKEI 279



 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 81/204 (39%), Positives = 115/204 (56%), Gaps = 14/204 (6%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCL---------PNSIGCLSKLKVLDVSGNLLESLPKT 52
           +PE++  RL N+ VLD+  N L+ L            IG L  LK L+++GN L +LPK 
Sbjct: 129 LPENI-GRLQNLEVLDLSVN-LRSLIFRSEEIGISEEIGDLQNLKELNLTGNRLTTLPKE 186

Query: 53  IENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDAR 112
           I   +SLE+L+ + N L  LP  IG  L NLK LS+  N++   P+ +  L SL  LD  
Sbjct: 187 IGKLQSLEKLDLSENSLAILPKEIG-RLQNLKRLSLKGNRLTTFPKEIGKLQSLEKLDLS 245

Query: 113 LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
            N L +LP+++  L NL  L++  N   L TLP  IG L +L EL +  N++TTLP  IG
Sbjct: 246 NNSLSTLPKEIGRLKNLRELSLEGN--RLSTLPKEIGRLKNLKELSLGGNRLTTLPKEIG 303

Query: 173 CLRKLQKLSLEGNPLVSPPMDVVE 196
             + L +L LEGN L + P  + +
Sbjct: 304 KFQNLIELRLEGNRLTTLPKGIAK 327



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/192 (39%), Positives = 113/192 (58%), Gaps = 13/192 (6%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V +L +   ++K LP  I  L  L+ LD+  N L +LPK I    +L+ L+   N L  
Sbjct: 46  DVHILSLSGQEIKNLPRQIANLKNLRKLDLRYNQLTTLPKEIGQLHNLQSLSLYGNLLST 105

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL---------PED 122
           LP+ IG  L NLK LS++ N ++ LP+++  L +L VLD  +N L+SL          E+
Sbjct: 106 LPEEIG-HLKNLKELSLSHNLLITLPENIGRLQNLEVLDLSVN-LRSLIFRSEEIGISEE 163

Query: 123 LENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           + +L NL+ LN++ N   L TLP  IG L SL +LD+S N +  LP  IG L+ L++LSL
Sbjct: 164 IGDLQNLKELNLTGN--RLTTLPKEIGKLQSLEKLDLSENSLAILPKEIGRLQNLKRLSL 221

Query: 183 EGNPLVSPPMDV 194
           +GN L + P ++
Sbjct: 222 KGNRLTTFPKEI 233



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/178 (38%), Positives = 102/178 (57%), Gaps = 3/178 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+  L++  N+L  LP  IG L  L+ LD+S N L  LPK I   ++L+ L+   N+L
Sbjct: 167 LQNLKELNLTGNRLTTLPKEIGKLQSLEKLDLSENSLAILPKEIGRLQNLKRLSLKGNRL 226

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
              P  IG +L +L+ L ++ N +  LP+ +  L +LR L    N L +LP+++  L NL
Sbjct: 227 TTFPKEIG-KLQSLEKLDLSNNSLSTLPKEIGRLKNLRELSLEGNRLSTLPKEIGRLKNL 285

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           + L++  N   L TLP  IG   +L+EL +  N++TTLP  I  L+ L  L+L  NPL
Sbjct: 286 KELSLGGN--RLTTLPKEIGKFQNLIELRLEGNRLTTLPKGIAKLQSLWSLNLSKNPL 341



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 50/130 (38%), Positives = 72/130 (55%), Gaps = 1/130 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  L +  N+L   P  IG L  L+ LD+S N L +LPK I   ++L EL+   N
Sbjct: 211 GRLQNLKRLSLKGNRLTTFPKEIGKLQSLEKLDLSNNSLSTLPKEIGRLKNLRELSLEGN 270

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG  L NLK LS+  N++  LP+ +    +L  L    N L +LP+ +  L 
Sbjct: 271 RLSTLPKEIG-RLKNLKELSLGGNRLTTLPKEIGKFQNLIELRLEGNRLTTLPKGIAKLQ 329

Query: 128 NLEVLNISQN 137
           +L  LN+S+N
Sbjct: 330 SLWSLNLSKN 339



 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 1/109 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++  LD+ +N L  LP  IG L  L+ L + GN L +LPK I   ++L+EL+   N
Sbjct: 234 GKLQSLEKLDLSNNSLSTLPKEIGRLKNLRELSLEGNRLSTLPKEIGRLKNLKELSLGGN 293

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
           +L  LP  IG +  NL  L +  N++  LP+ +  L SL  L+   N L
Sbjct: 294 RLTTLPKEIG-KFQNLIELRLEGNRLTTLPKGIAKLQSLWSLNLSKNPL 341


>gi|24216023|ref|NP_713504.1| hypothetical protein LA_3324 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075104|ref|YP_005989423.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24197251|gb|AAN50522.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458895|gb|AER03440.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 329

 Score =  110 bits (275), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 123/220 (55%), Gaps = 8/220 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + +NQ+  LP  I  L  LKVL +S N L +LPK IE  ++L+ L    N
Sbjct: 110 EQLKNLQALYLGNNQITILPKEIRQLQNLKVLFLSNNQLTTLPKEIEQLKNLQTLYLGNN 169

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L   P  I  +L NL+ L +  N++ +LPQ +  L +L++LD   N LK+LP+++E L 
Sbjct: 170 RLTTFPKEIE-QLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLK 228

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+  N   L  LP  I  L +L  L + YN++TTLP  IG L+ L+ L L  N L
Sbjct: 229 NLQELNLGYN--QLTVLPKEIEQLKNLQTLYLGYNQLTTLPKEIGQLQNLKVLFLNNNQL 286

Query: 188 VSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
            + P ++       +K      +NN+  S ++K  + KL+
Sbjct: 287 TTLPKEI-----GQLKNLQELYLNNNQLSIEEKERIQKLI 321



 Score = 38.1 bits (87), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R+L+     L +LP+++  L NL+ LN+  N   +  LP  IG L +L 
Sbjct: 36  LTKALQNPLDVRILNLSEQKLTTLPKEIGQLKNLQELNLGNN--QITILPKEIGQLQNLQ 93

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L + YN++T LP  I  L+ LQ L L  N +   P ++
Sbjct: 94  LLGLYYNQLTILPKEIEQLKNLQALYLGNNQITILPKEI 132


>gi|417765366|ref|ZP_12413328.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352303|gb|EJP04499.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 385

 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 77/189 (40%), Positives = 112/189 (59%), Gaps = 5/189 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGN--LLESLPKTIENCRSLEELNAN 65
            RL N+  L +  N+L  LP  IG L  L+ L + G       LPK I   ++L+EL+  
Sbjct: 164 GRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLK 223

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
           FN+L  LP  IG +L NL+ L +  N++ ILP+ +  L +L VLD   N L  LP+++  
Sbjct: 224 FNRLTVLPKEIG-QLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 282

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L NL+VL++ QN   L TLP  IG L +L +L +S N++TTLP  IG L+KL+ L L+ N
Sbjct: 283 LQNLQVLDLYQN--RLTTLPKEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHN 340

Query: 186 PLVSPPMDV 194
            L + P ++
Sbjct: 341 QLATLPEEI 349



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 107/187 (57%), Gaps = 1/187 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L+  +NQL  LP  IG L  L+ L +  N L +LP+ I   ++L+ L+ N N
Sbjct: 72  GQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNN 131

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+ L++  N++ ILP+ +  L +L+ L   LN L  LPE++  L 
Sbjct: 132 QLTTLPEEIG-KLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLE 190

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  L++    +    LP  I  L +L EL + +N++T LP  IG L+ L+ L L  N L
Sbjct: 191 SLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRL 250

Query: 188 VSPPMDV 194
              P ++
Sbjct: 251 TILPKEI 257



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 108/184 (58%), Gaps = 5/184 (2%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           V +LD+  ++LK LP  IG L  L++L+   N L +LPK I   ++L+EL+   N+L  L
Sbjct: 54  VRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTL 113

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P+ IG +L NLK L +N N++  LP+ +  L +L+ L+  +N L  LP+++  L NL+ L
Sbjct: 114 PEEIG-QLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQEL 172

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDV-SYNK-ITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            +S N   L  LP  IG L SL +L +   NK  T LP  I  L+ LQ+L L+ N L   
Sbjct: 173 YLSLN--RLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVL 230

Query: 191 PMDV 194
           P ++
Sbjct: 231 PKEI 234



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/130 (39%), Positives = 77/130 (59%), Gaps = 1/130 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +LD++ N+L  LP  IG L  L VLD+SGN L  LPK I   ++L+ L+   N
Sbjct: 235 GQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQVLDLYQN 294

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L ++ N++  LP+ +  L  L  L    N L +LPE+++ L 
Sbjct: 295 RLTTLPKEIG-QLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLK 353

Query: 128 NLEVLNISQN 137
           NL+ L +  N
Sbjct: 354 NLKKLYLHNN 363


>gi|456984210|gb|EMG20325.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 258

 Score =  110 bits (274), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 115/184 (62%), Gaps = 5/184 (2%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V +L +   +L  LP  I  L  L++LD+  N  +++PK IE  ++L+ L+  +N+ +
Sbjct: 66  LDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYNQFK 125

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            +P  IG +L NL+ L+++ N++  LP+ +    +L+VL+   N LK+LP+ +E L NL+
Sbjct: 126 TVPKKIG-QLKNLQVLNLSSNQLTTLPKEIGKPENLQVLNLGSNRLKTLPKGIEQLKNLQ 184

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +  N+  L TLP  IG L SL EL + +N+I TLPD I  L+ L+KL+L  NP+  P
Sbjct: 185 TLYL--NYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQNLRKLTLYENPI--P 240

Query: 191 PMDV 194
           P ++
Sbjct: 241 PQEL 244



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 78/129 (60%), Gaps = 1/129 (0%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ +LD+  NQ K +P  IG L  L+VL++S N L +LPK I    +L+ LN   N+
Sbjct: 110 QLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKPENLQVLNLGSNR 169

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L+ LP  I  +L NL+TL +N N++  LP+ +  L SL  L  + N + +LP+++  L N
Sbjct: 170 LKTLPKGIE-QLKNLQTLYLNYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQN 228

Query: 129 LEVLNISQN 137
           L  L + +N
Sbjct: 229 LRKLTLYEN 237



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 1/102 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL++ SNQL  LP  IG    L+VL++  N L++LPK IE  ++L+ L  N+N
Sbjct: 132 GQLKNLQVLNLSSNQLTTLPKEIGKPENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYN 191

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           +L  LP  IG  L +L  L +  N+I  LP  +  L +LR L
Sbjct: 192 QLTTLPREIG-RLQSLTELHLQHNQIATLPDEIIQLQNLRKL 232



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R+L      L +LP+ +E L NL++L++  N    +T+P  I  L +L 
Sbjct: 58  LTEALQNSLDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYN--QFKTVPKEIEQLKNLQ 115

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LD+ YN+  T+P  IG L+ LQ L+L  N L + P ++
Sbjct: 116 MLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEI 154



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L E L+N +++ +L +S+  Q L TLP  I  L +L  LD+ YN+  T+P  I  L+ 
Sbjct: 56  RDLTEALQNSLDVRILILSE--QKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKN 113

Query: 177 LQKLSLEGNPLVSPPMDV 194
           LQ L L  N   + P  +
Sbjct: 114 LQMLDLCYNQFKTVPKKI 131


>gi|410451688|ref|ZP_11305690.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014454|gb|EKO76584.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 511

 Score =  110 bits (274), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 74/184 (40%), Positives = 109/184 (59%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           ++V  LD+ +NQL   P  IG L  LK L ++ N L++LPK IE  + L+ L  + N+L+
Sbjct: 38  MDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLK 97

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG  L NL+ L +  N++  LP  +  L SL+ L    N L +LP+++  L +LE
Sbjct: 98  TLPKEIG-TLQNLEVLDLYKNQLRTLPSEIGKLRSLKRLHLEHNQLITLPQEIGTLQDLE 156

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN++ N   L  LP  IG L  L +L+V  N++ TLP  IG L+ LQ L+LE N LV+ 
Sbjct: 157 ELNLANN--QLRILPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTL 214

Query: 191 PMDV 194
           P ++
Sbjct: 215 PKEI 218



 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  +  L + +NQLK LP  IG L  LK L +  N LES PK I    +L+ L+  +N
Sbjct: 242 GKLQKLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLPNLQRLHLEYN 301

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP  IG  L  L  L++  N++  LPQ +  L  L  L+   N L +LP+++  L 
Sbjct: 302 RFTTLPQEIG-TLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQ 360

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L ++ N   L TLP  IG L +L +LD+ YN++ TLP++IG L++L+ LSL+ N L
Sbjct: 361 KLQHLYLANN--QLATLPKEIGQLQNLKDLDLEYNQLATLPEAIGTLQRLEWLSLKNNQL 418

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 419 TTLPEEI 425



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 75/185 (40%), Positives = 110/185 (59%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+  L + +NQLK LP  I  L KLK L +S N L++LPK I   ++LE L+   N+L
Sbjct: 60  LQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLKTLPKEIGTLQNLEVLDLYKNQL 119

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           R LP  IG +L +LK L +  N+++ LPQ +  L  L  L+   N L+ LP+++  L +L
Sbjct: 120 RTLPSEIG-KLRSLKRLHLEHNQLITLPQEIGTLQDLEELNLANNQLRILPKEIGTLQHL 178

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           + LN+  N   L TLP  IG L +L  L++  N++ TLP  IG L+KL+ L L  N L +
Sbjct: 179 QDLNVFNN--QLITLPQEIGTLQNLQSLNLENNRLVTLPKEIGALQKLEWLYLTNNQLAT 236

Query: 190 PPMDV 194
            P ++
Sbjct: 237 LPKEI 241



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/185 (40%), Positives = 112/185 (60%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+ VLD++ NQL+ LP+ IG L  LK L +  N L +LP+ I   + LEELN   N+L
Sbjct: 106 LQNLEVLDLYKNQLRTLPSEIGKLRSLKRLHLEHNQLITLPQEIGTLQDLEELNLANNQL 165

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           R LP  IG  L +L+ L++  N+++ LPQ +  L +L+ L+   N L +LP+++  L  L
Sbjct: 166 RILPKEIG-TLQHLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKEIGALQKL 224

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           E L ++ N   L TLP  IG L  L  L ++ N++ +LP  IG L+ L++L LE N L S
Sbjct: 225 EWLYLTNN--QLATLPKEIGKLQKLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLES 282

Query: 190 PPMDV 194
            P ++
Sbjct: 283 FPKEI 287



 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 102/184 (55%), Gaps = 3/184 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L +  N+   LP  IG L +L  L++  N L +LP+ I     LE LN   N+L  
Sbjct: 292 NLQRLHLEYNRFTTLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLAT 351

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG  L  L+ L +  N++  LP+ +  L +L+ LD   N L +LPE +  L  LE 
Sbjct: 352 LPKEIG-TLQKLQHLYLANNQLATLPKEIGQLQNLKDLDLEYNQLATLPEAIGTLQRLEW 410

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L++  N   L TLP  IG L  +V+L+++ N++ TLP  IG L+ L+ L L GNP  + P
Sbjct: 411 LSLKNN--QLTTLPEEIGTLQKIVKLNLANNQLRTLPQGIGQLQSLKDLDLSGNPFTTFP 468

Query: 192 MDVV 195
            ++V
Sbjct: 469 KEIV 472



 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 101/179 (56%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  NQL  LP  IG L  L+ L+++ N L  LPK I   + L++LN   N+L  LP  
Sbjct: 135 LHLEHNQLITLPQEIGTLQDLEELNLANNQLRILPKEIGTLQHLQDLNVFNNQLITLPQE 194

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L NL++L++  N++V LP+ +  L  L  L    N L +LP+++  L  LE L ++
Sbjct: 195 IG-TLQNLQSLNLENNRLVTLPKEIGALQKLEWLYLTNNQLATLPKEIGKLQKLEWLGLT 253

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L++LP  IG L +L EL +  N++ + P  IG L  LQ+L LE N   + P ++
Sbjct: 254 NN--QLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLPNLQRLHLEYNRFTTLPQEI 310



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 98/196 (50%), Gaps = 26/196 (13%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL  +  L++++N+L  LP  IG L KL+ L ++ N L +LPK I   ++L++L+  +N
Sbjct: 334 GRLERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANNQLATLPKEIGQLQNLKDLDLEYN 393

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG                         L  L  L  + N L +LPE++  L 
Sbjct: 394 QLATLPEAIG------------------------TLQRLEWLSLKNNQLTTLPEEIGTLQ 429

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            +  LN++ N   L TLP  IG L SL +LD+S N  TT P  I  L+ LQ L L+  P 
Sbjct: 430 KIVKLNLANN--QLRTLPQGIGQLQSLKDLDLSGNPFTTFPKEIVGLKHLQMLKLKNIPA 487

Query: 188 VSPPMDVVEQGLSAVK 203
           +    + + + L  VK
Sbjct: 488 LLSERETIRKLLPDVK 503


>gi|418695046|ref|ZP_13256072.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|409957205|gb|EKO16120.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
          Length = 525

 Score =  110 bits (274), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 76/184 (41%), Positives = 116/184 (63%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL+++  +L  LP  IG L  L+ L +  N L +LPK I   ++LE L+ + N+L 
Sbjct: 48  LDVRVLNLNGQKLTSLPREIGQLKNLRELSLKWNQLVTLPKEIVELQNLEHLDLSENQLV 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ IG  L NL++L +  NK+  LP+ +  L +L++L +  N L  LP+++  L NLE
Sbjct: 108 ILPNEIG-RLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPKEIGQLENLE 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+S+N   L T+P  IG L +L EL +S N++ TLP+ IG LR LQ+L+L+ N LV+ 
Sbjct: 167 NLNLSEN--RLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQLRNLQELNLKWNQLVTL 224

Query: 191 PMDV 194
           P  +
Sbjct: 225 PKGI 228



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  LD+  NQL  LPN IG L  L+ LD+  N L +LPK I   ++L+ L +  N
Sbjct: 91  VELQNLEHLDLSENQLVILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPEN 150

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L+++ N++  +P+ +  L +L+ L    N L +LP ++  L 
Sbjct: 151 RLAILPKEIG-QLENLENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQLR 209

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+  N   L TLP  IG L +L  LD+  N++T LP   G L+ LQKL+L  N L
Sbjct: 210 NLQELNLKWN--QLVTLPKGIGRLQNLQTLDLHENRLTILPREFGQLQSLQKLNLVNNRL 267

Query: 188 VSPPMDV 194
           +  P ++
Sbjct: 268 IILPKEI 274



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/186 (38%), Positives = 105/186 (56%), Gaps = 3/186 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  NQL  LP  I  L  L+ LD+S N L  LP  I   ++L+ L+   N
Sbjct: 68  GQLKNLRELSLKWNQLVTLPKEIVELQNLEHLDLSENQLVILPNEIGRLKNLQSLDLYKN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  LP  IG +L NL+ L    N++ ILP+ +  L +L  L+   N L ++P+++  L 
Sbjct: 128 KLTTLPKEIG-QLQNLQMLWSPENRLAILPKEIGQLENLENLNLSENRLTTVPKEIGQLK 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++S N   L TLP  IG L +L EL++ +N++ TLP  IG L+ LQ L L  N L
Sbjct: 187 NLQELHLSGN--QLVTLPNEIGQLRNLQELNLKWNQLVTLPKGIGRLQNLQTLDLHENRL 244

Query: 188 VSPPMD 193
              P +
Sbjct: 245 TILPRE 250



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/180 (38%), Positives = 104/180 (57%), Gaps = 3/180 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  LD++ N+L  LP  IG L  L++L    N L  LPK I    +LE LN + N
Sbjct: 114 GRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPKEIGQLENLENLNLSEN 173

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  IG +L NL+ L ++ N++V LP  +  L +L+ L+ + N L +LP+ +  L 
Sbjct: 174 RLTTVPKEIG-QLKNLQELHLSGNQLVTLPNEIGQLRNLQELNLKWNQLVTLPKGIGRLQ 232

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++ +N   L  LP   G L SL +L++  N++  LP  IG L+ LQ L L  NPL
Sbjct: 233 NLQTLDLHEN--RLTILPREFGQLQSLQKLNLVNNRLIILPKEIGQLQNLQDLDLLMNPL 290



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 89/168 (52%), Gaps = 22/168 (13%)

Query: 48  SLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
            L K ++N   +  LN N  KL  LP  IG +L NL+ LS+  N++V LP+ +  L +L 
Sbjct: 39  DLTKALQNPLDVRVLNLNGQKLTSLPREIG-QLKNLRELSLKWNQLVTLPKEIVELQNLE 97

Query: 108 VLDARLNCLKSLPEDLENLINLEVLNIS--------------QNFQYLET-------LPY 146
            LD   N L  LP ++  L NL+ L++               QN Q L +       LP 
Sbjct: 98  HLDLSENQLVILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPK 157

Query: 147 SIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            IG L +L  L++S N++TT+P  IG L+ LQ+L L GN LV+ P ++
Sbjct: 158 EIGQLENLENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEI 205



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 67/123 (54%), Gaps = 3/123 (2%)

Query: 50  PKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           PK I   R+L+ L+        LP  IG  L NLK L++  N +  +P  +  L +L  L
Sbjct: 346 PKVILKFRNLQSLHLYDCGFPTLPKEIG-RLKNLKYLALGLNGLKDIPSEIGQLRNLEAL 404

Query: 110 DARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPD 169
           +   N L+ LP+++  L NL+ L++ QN   L+  P  IG L SL  LD+S N++ TLP 
Sbjct: 405 NLEANVLEGLPKEIGQLRNLQKLSLHQN--KLKIFPVGIGQLKSLQWLDLSANELITLPK 462

Query: 170 SIG 172
            IG
Sbjct: 463 EIG 465



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 79/130 (60%), Gaps = 1/130 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  L +  N LK +P+ IG L  L+ L++  N+LE LPK I   R+L++L+ + N
Sbjct: 373 GRLKNLKYLALGLNGLKDIPSEIGQLRNLEALNLEANVLEGLPKEIGQLRNLQKLSLHQN 432

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL+  P  IG +L +L+ L ++ N+++ LP+ +  L +L  L+   N L +L +++  L 
Sbjct: 433 KLKIFPVGIG-QLKSLQWLDLSANELITLPKEIGQLENLENLNLSNNQLTTLSQEIGQLE 491

Query: 128 NLEVLNISQN 137
           NL  LN+S N
Sbjct: 492 NLRELNLSNN 501



 Score = 37.0 bits (84), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 30/40 (75%)

Query: 157 LDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           L+++  K+T+LP  IG L+ L++LSL+ N LV+ P ++VE
Sbjct: 53  LNLNGQKLTSLPREIGQLKNLRELSLKWNQLVTLPKEIVE 92


>gi|421106546|ref|ZP_15567112.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
 gi|410008404|gb|EKO62075.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
          Length = 525

 Score =  110 bits (274), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 76/184 (41%), Positives = 116/184 (63%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL+++  +L  LP  IG L  L+ L +  N L +LPK I   ++LE L+ + N+L 
Sbjct: 48  LDVRVLNLNGQKLTSLPREIGQLKNLRELSLKWNQLVTLPKEIVELQNLEHLDLSENQLV 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ IG  L NL++L +  NK+  LP+ +  L +L++L +  N L  LP+++  L NLE
Sbjct: 108 ILPNEIG-RLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPKEIGQLENLE 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+S+N   L T+P  IG L +L EL +S N++ TLP+ IG LR LQ+L+L+ N LV+ 
Sbjct: 167 NLNLSEN--RLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQLRNLQELNLKWNQLVTL 224

Query: 191 PMDV 194
           P  +
Sbjct: 225 PKGI 228



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  LD+  NQL  LPN IG L  L+ LD+  N L +LPK I   ++L+ L +  N
Sbjct: 91  VELQNLEHLDLSENQLVILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPEN 150

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L+++ N++  +P+ +  L +L+ L    N L +LP ++  L 
Sbjct: 151 RLAILPKEIG-QLENLENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQLR 209

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+  N   L TLP  IG L +L  LD+  N++T LP   G L+ LQKL+L  N L
Sbjct: 210 NLQELNLKWN--QLVTLPKGIGRLQNLQTLDLHENRLTILPREFGQLQSLQKLNLVNNRL 267

Query: 188 VSPPMDV 194
           +  P ++
Sbjct: 268 IILPKEI 274



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/186 (38%), Positives = 105/186 (56%), Gaps = 3/186 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  NQL  LP  I  L  L+ LD+S N L  LP  I   ++L+ L+   N
Sbjct: 68  GQLKNLRELSLKWNQLVTLPKEIVELQNLEHLDLSENQLVILPNEIGRLKNLQSLDLYKN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  LP  IG +L NL+ L    N++ ILP+ +  L +L  L+   N L ++P+++  L 
Sbjct: 128 KLTTLPKEIG-QLQNLQMLWSPENRLAILPKEIGQLENLENLNLSENRLTTVPKEIGQLK 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++S N   L TLP  IG L +L EL++ +N++ TLP  IG L+ LQ L L  N L
Sbjct: 187 NLQELHLSGN--QLVTLPNEIGQLRNLQELNLKWNQLVTLPKGIGRLQNLQTLDLHENRL 244

Query: 188 VSPPMD 193
              P +
Sbjct: 245 TILPRE 250



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/180 (38%), Positives = 104/180 (57%), Gaps = 3/180 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  LD++ N+L  LP  IG L  L++L    N L  LPK I    +LE LN + N
Sbjct: 114 GRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPKEIGQLENLENLNLSEN 173

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  IG +L NL+ L ++ N++V LP  +  L +L+ L+ + N L +LP+ +  L 
Sbjct: 174 RLTTVPKEIG-QLKNLQELHLSGNQLVTLPNEIGQLRNLQELNLKWNQLVTLPKGIGRLQ 232

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++ +N   L  LP   G L SL +L++  N++  LP  IG L+ LQ L L  NPL
Sbjct: 233 NLQTLDLHEN--RLTILPREFGQLQSLQKLNLVNNRLIILPKEIGQLQNLQDLDLLMNPL 290



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 89/168 (52%), Gaps = 22/168 (13%)

Query: 48  SLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
            L K ++N   +  LN N  KL  LP  IG +L NL+ LS+  N++V LP+ +  L +L 
Sbjct: 39  DLTKALQNPLDVRVLNLNGQKLTSLPREIG-QLKNLRELSLKWNQLVTLPKEIVELQNLE 97

Query: 108 VLDARLNCLKSLPEDLENLINLEVLNIS--------------QNFQYLET-------LPY 146
            LD   N L  LP ++  L NL+ L++               QN Q L +       LP 
Sbjct: 98  HLDLSENQLVILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPK 157

Query: 147 SIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            IG L +L  L++S N++TT+P  IG L+ LQ+L L GN LV+ P ++
Sbjct: 158 EIGQLENLENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEI 205



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 67/123 (54%), Gaps = 3/123 (2%)

Query: 50  PKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           PK I   R+L+ L+        LP  IG  L NLK L++  N +  +P  +  L +L  L
Sbjct: 346 PKVILKFRNLQSLHLYDCGFPTLPKEIG-RLKNLKYLTLGLNGLKDIPSEIGQLRNLEAL 404

Query: 110 DARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPD 169
           +   N L+ LP+++  L NL+ L++ QN   L+  P  IG L SL  LD+S N++ TLP 
Sbjct: 405 NLEANVLEGLPKEIGQLRNLQKLSLHQN--KLKIFPVGIGQLKSLQWLDLSANELITLPK 462

Query: 170 SIG 172
            IG
Sbjct: 463 EIG 465



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 79/130 (60%), Gaps = 1/130 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  L +  N LK +P+ IG L  L+ L++  N+LE LPK I   R+L++L+ + N
Sbjct: 373 GRLKNLKYLTLGLNGLKDIPSEIGQLRNLEALNLEANVLEGLPKEIGQLRNLQKLSLHQN 432

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL+  P  IG +L +L+ L ++ N+++ LP+ +  L +L  L+   N L +L +++  L 
Sbjct: 433 KLKIFPVGIG-QLKSLQWLDLSANELITLPKEIGQLENLENLNLSNNQLTTLSQEIGQLE 491

Query: 128 NLEVLNISQN 137
           NL  LN+S N
Sbjct: 492 NLRELNLSNN 501



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/156 (35%), Positives = 86/156 (55%), Gaps = 3/156 (1%)

Query: 48  SLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
           +LPK I   ++L+ L    N L+ +P  IG +L NL+ L++  N +  LP+ +  L +L+
Sbjct: 367 TLPKEIGRLKNLKYLTLGLNGLKDIPSEIG-QLRNLEALNLEANVLEGLPKEIGQLRNLQ 425

Query: 108 VLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
            L    N LK  P  +  L +L+ L++S N   L TLP  IG L +L  L++S N++TTL
Sbjct: 426 KLSLHQNKLKIFPVGIGQLKSLQWLDLSAN--ELITLPKEIGQLENLENLNLSNNQLTTL 483

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVK 203
              IG L  L++L+L  N L S   + + + L   K
Sbjct: 484 SQEIGQLENLRELNLSNNQLSSEEKERIRKLLPKCK 519



 Score = 37.0 bits (84), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 30/40 (75%)

Query: 157 LDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           L+++  K+T+LP  IG L+ L++LSL+ N LV+ P ++VE
Sbjct: 53  LNLNGQKLTSLPREIGQLKNLRELSLKWNQLVTLPKEIVE 92


>gi|46445672|ref|YP_007037.1| hypothetical protein pc0038 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46399313|emb|CAF22762.1| conserved hypothetical protein [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 953

 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/180 (40%), Positives = 111/180 (61%), Gaps = 3/180 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L +++N+L+ LP S G L++LK L ++ N L+SLP+   N  +L+ L+ N N
Sbjct: 359 GNLTNLTKLYLNNNKLELLPTSFGKLTQLKKLQIAYNQLQSLPELFTNLINLQTLDLNNN 418

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            LR LPD+ G  L  L  L+++ N++ +LP S  +LT LR L    N L+SLP  L NL+
Sbjct: 419 NLRTLPDSFG-NLNRLHVLNLSNNQLQVLPHSFGNLTQLRDLHIAYNQLQSLPGSLTNLV 477

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L+++ N   L+TLP S G L  +  L+++ N+  +LP+S G L KLQ L L  N +
Sbjct: 478 NLQTLDLNNN--NLQTLPNSFGNLNQINYLNLANNQFHSLPESFGNLTKLQCLYLYNNQI 535



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 113/190 (59%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE  T  L+N+  LD+++N L+ LP+S G L++L VL++S N L+ LP +  N   L +
Sbjct: 400 LPELFT-NLINLQTLDLNNNNLRTLPDSFGNLNRLHVLNLSNNQLQVLPHSFGNLTQLRD 458

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+  +N+L+ LP ++   L+NL+TL +N N +  LP S  +L  +  L+   N   SLPE
Sbjct: 459 LHIAYNQLQSLPGSLT-NLVNLQTLDLNNNNLQTLPNSFGNLNQINYLNLANNQFHSLPE 517

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
              NL  L+ L +  N   ++ LP +   L++L EL ++YN++ TLP++   L  L+ L+
Sbjct: 518 SFGNLTKLQCLYLYNN--QIQILPETFSNLINLTELHLNYNQLQTLPETFTNLTNLRNLN 575

Query: 182 LEGNPLVSPP 191
           L GN   + P
Sbjct: 576 LTGNNFETIP 585



 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 113/214 (52%), Gaps = 27/214 (12%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKT-------- 52
           ++P S    L+N+  L++ +NQL+ LP+S G L+ L+ L +  N LE LP +        
Sbjct: 284 LLPSSF-GNLINLFFLNLINNQLQTLPDSFGNLTNLQFLYLYNNKLELLPTSFGNLNQLN 342

Query: 53  ---------------IENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILP 97
                            N  +L +L  N NKL  LP + G +L  LK L I  N++  LP
Sbjct: 343 KLNLANNQLQILPQFFGNLTNLTKLYLNNNKLELLPTSFG-KLTQLKKLQIAYNQLQSLP 401

Query: 98  QSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVEL 157
           +  T+L +L+ LD   N L++LP+   NL  L VLN+S N   L+ LP+S G L  L +L
Sbjct: 402 ELFTNLINLQTLDLNNNNLRTLPDSFGNLNRLHVLNLSNN--QLQVLPHSFGNLTQLRDL 459

Query: 158 DVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            ++YN++ +LP S+  L  LQ L L  N L + P
Sbjct: 460 HIAYNQLQSLPGSLTNLVNLQTLDLNNNNLQTLP 493



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 80/125 (64%), Gaps = 2/125 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P SLT  L+N+  LD+++N L+ LPNS G L+++  L+++ N   SLP++  N   L+ 
Sbjct: 469 LPGSLT-NLVNLQTLDLNNNNLQTLPNSFGNLNQINYLNLANNQFHSLPESFGNLTKLQC 527

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+++ LP+T    LINL  L +N N++  LP++ T+LT+LR L+   N  +++PE
Sbjct: 528 LYLYNNQIQILPETFS-NLINLTELHLNYNQLQTLPETFTNLTNLRNLNLTGNNFETIPE 586

Query: 122 DLENL 126
            L +L
Sbjct: 587 CLFHL 591



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 101/249 (40%), Gaps = 75/249 (30%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTI------------ENCRS---LE 60
           LD+ +NQL+ LPNS   L+ L+ L++  N    +P  +            EN  S   L+
Sbjct: 155 LDLTNNQLQTLPNSFENLTNLRSLNLCNNQFSEIPDCLFRLPSACDINLKENPLSQEILD 214

Query: 61  ELNANFNKLR-----------------QLPDTI------------------GFELINLKT 85
           +LN   N+                   +L D I                   FE+ +   
Sbjct: 215 QLNQRVNQTNYQGPKFQVSSPTPSFCSELMDQIIPRSEPILLDDALAQFCRFFEIHDTSM 274

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           +S+    I +LP S  +L +L  L+   N L++LP+   NL NL+ L +  N   LE LP
Sbjct: 275 ISLTEKNIQLLPSSFGNLINLFFLNLINNQLQTLPDSFGNLTNLQFLYLYNN--KLELLP 332

Query: 146 YSIGL-----------------------LMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
            S G                        L +L +L ++ NK+  LP S G L +L+KL +
Sbjct: 333 TSFGNLNQLNKLNLANNQLQILPQFFGNLTNLTKLYLNNNKLELLPTSFGKLTQLKKLQI 392

Query: 183 EGNPLVSPP 191
             N L S P
Sbjct: 393 AYNQLQSLP 401



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 95/217 (43%), Gaps = 58/217 (26%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
            + N  ++ +    L  LP+S G L++L  LD++ N L++LP + EN  +L  LN   N+
Sbjct: 125 EIYNTRIISLAEKNLHILPSSFGNLNQLNHLDLTNNQLQTLPNSFENLTNLRSLNLCNNQ 184

Query: 69  LRQLPDTIGFEL-----INLKTLSIN------------------------------CNKI 93
             ++PD + F L     INLK   ++                              C+++
Sbjct: 185 FSEIPDCL-FRLPSACDINLKENPLSQEILDQLNQRVNQTNYQGPKFQVSSPTPSFCSEL 243

Query: 94  V--ILPQS----------------LTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           +  I+P+S                  H TS+  L  +   ++ LP    NLINL  LN+ 
Sbjct: 244 MDQIIPRSEPILLDDALAQFCRFFEIHDTSMISLTEK--NIQLLPSSFGNLINLFFLNLI 301

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
            N   L+TLP S G L +L  L +  NK+  LP S G
Sbjct: 302 NN--QLQTLPDSFGNLTNLQFLYLYNNKLELLPTSFG 336



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 33/60 (55%)

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
           FE+ N + +S+    + ILP S  +L  L  LD   N L++LP   ENL NL  LN+  N
Sbjct: 124 FEIYNTRIISLAEKNLHILPSSFGNLNQLNHLDLTNNQLQTLPNSFENLTNLRSLNLCNN 183


>gi|418702929|ref|ZP_13263821.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410767473|gb|EKR38148.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 328

 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 131/227 (57%), Gaps = 11/227 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L N+  L++  NQ+K +P  I  L KL+ L +  N L +LP+ I   ++L+ 
Sbjct: 104 LPQEI-GQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQS 162

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L  LP  IG  L NL+ L +  N++ ILP  +  L +L+ L+ R N L +L +
Sbjct: 163 LDLSTNRLTTLPQEIGH-LQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSK 221

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++E L NL+ L++  N   L T P  IG L +L  LD+  N++TTLP+ IG L+ LQ L 
Sbjct: 222 EIEQLQNLKSLDLRSN--QLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLD 279

Query: 182 LEGNPLVSPPMDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
           L+ N L + P ++ + Q L  +       +NN+  S ++K  + KL+
Sbjct: 280 LDSNQLTTLPQEIGQLQNLQEL------FLNNNQLSSQEKKRIRKLL 320



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/184 (38%), Positives = 107/184 (58%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V  LD+ +N+ K LP  IG L  L+ L++S N ++++PK IE  + L+ L    N+L 
Sbjct: 20  LKVRTLDLSANRFKTLPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLT 79

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG +L  L+ L +  N++  LPQ +  L +L+ L+   N +K++P+ +E L  L+
Sbjct: 80  TLPQEIG-QLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQ 138

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +  N   L TLP  IG L +L  LD+S N++TTLP  IG L+ LQ L L  N L   
Sbjct: 139 SLGLDNN--QLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTIL 196

Query: 191 PMDV 194
           P ++
Sbjct: 197 PNEI 200



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/182 (37%), Positives = 108/182 (59%), Gaps = 3/182 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++ +NQ+K +P  I  L KL+ L +  N L +LP+ I   + L+ L    N
Sbjct: 40  GQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKN 99

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NLK+L+++ N+I  +P+ +  L  L+ L    N L +LP+++  L 
Sbjct: 100 QLTTLPQEIG-QLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQ 158

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++S N   L TLP  IG L +L +L +  N++T LP+ IG L+ LQ L+L  N L
Sbjct: 159 NLQSLDLSTN--RLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRL 216

Query: 188 VS 189
            +
Sbjct: 217 TT 218



 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 73/141 (51%), Gaps = 5/141 (3%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R LD   N  K+LP+++  L NL  LN+S N   ++T+P  I  L  L 
Sbjct: 12  LTKALQNPLKVRTLDLSANRFKTLPKEIGQLKNLRKLNLSAN--QIKTIPKEIEKLQKLQ 69

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHK 215
            L +  N++TTLP  IG L+KLQ L L  N L + P ++ +  L  +K  L+   N    
Sbjct: 70  SLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQ--LKNLKS-LNLSYNQIKT 126

Query: 216 SPKKKSWVGKLVKYGTFNGAL 236
            PKK   + KL   G  N  L
Sbjct: 127 IPKKIEKLQKLQSLGLDNNQL 147


>gi|421110777|ref|ZP_15571268.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803874|gb|EKS10001.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 390

 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/210 (37%), Positives = 124/210 (59%), Gaps = 8/210 (3%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L N+  L++  N+L  LP  IG L  L+ LD+  N +  LPK I   +SL+E
Sbjct: 52  LPEEI-GKLQNLQELNLWENKLTTLPQEIGNLQYLQKLDLGFNKITVLPKEIGQLQSLQE 110

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN +FN+L  LP  IG  L +LK L +  N+   LP+ +  L +L+ +++  N L +LP+
Sbjct: 111 LNLSFNQLATLPKEIG-NLQHLKRLFLGLNQFTALPEEIGKLQNLQEMESSKNQLTTLPK 169

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++ NL NL+ L +++N   L  LP  IG L +L +L ++ N++T LP  IG L+ LQKL 
Sbjct: 170 EIGNLQNLQELYLNEN--QLTALPIEIGNLQNLQKLVLNRNQLTALPIEIGNLQNLQKLV 227

Query: 182 LEGNPLVSPPMDVVE----QGLSAVKGYLS 207
           L  N L + P+++      QGL+  K  L+
Sbjct: 228 LNRNQLTALPIEIGNLQNLQGLNLDKNQLT 257



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/182 (38%), Positives = 111/182 (60%), Gaps = 3/182 (1%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           V VL ++  +L  LP  IG L  L+ L++  N L +LP+ I N + L++L+  FNK+  L
Sbjct: 39  VRVLYLNGKKLTALPEEIGKLQNLQELNLWENKLTTLPQEIGNLQYLQKLDLGFNKITVL 98

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P  IG +L +L+ L+++ N++  LP+ + +L  L+ L   LN   +LPE++  L NL+ +
Sbjct: 99  PKEIG-QLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQEM 157

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
             S+N   L TLP  IG L +L EL ++ N++T LP  IG L+ LQKL L  N L + P+
Sbjct: 158 ESSKN--QLTTLPKEIGNLQNLQELYLNENQLTALPIEIGNLQNLQKLVLNRNQLTALPI 215

Query: 193 DV 194
           ++
Sbjct: 216 EI 217



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 104/179 (58%), Gaps = 3/179 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L ++ NQL  LP  IG L  L+ L ++ N L +LP  I N ++L+ LN + N
Sbjct: 195 GNLQNLQKLVLNRNQLTALPIEIGNLQNLQKLVLNRNQLTALPIEIGNLQNLQGLNLDKN 254

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L +  NK+  LP  + +L  L+ L    N L ++P+++ NL 
Sbjct: 255 QLTTLPKEIR-KLQNLQGLHLGNNKLTALPIEIGNLQKLKWLGLNKNQLTTIPKEIGNLQ 313

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           NL+ LN+S N   L T+P  I  L  L  LD+  N++TTLP  IG L+ LQ+L L GNP
Sbjct: 314 NLKELNLSSN--QLTTIPKEIENLQKLETLDLYNNQLTTLPKEIGNLQNLQRLYLGGNP 370



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 111/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L ++ NQL  LP  IG L  L+ L ++ N L +LP  I N ++L++L  N N
Sbjct: 172 GNLQNLQELYLNENQLTALPIEIGNLQNLQKLVLNRNQLTALPIEIGNLQNLQKLVLNRN 231

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG  L NL+ L+++ N++  LP+ +  L +L+ L    N L +LP ++ NL 
Sbjct: 232 QLTALPIEIG-NLQNLQGLNLDKNQLTTLPKEIRKLQNLQGLHLGNNKLTALPIEIGNLQ 290

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L +++N   L T+P  IG L +L EL++S N++TT+P  I  L+KL+ L L  N L
Sbjct: 291 KLKWLGLNKN--QLTTIPKEIGNLQNLKELNLSSNQLTTIPKEIENLQKLETLDLYNNQL 348

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 349 TTLPKEI 355



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/161 (38%), Positives = 98/161 (60%), Gaps = 3/161 (1%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           ++++VL ++G  L +LP+ I   ++L+ELN   NKL  LP  IG  L  L+ L +  NKI
Sbjct: 37  TQVRVLYLNGKKLTALPEEIGKLQNLQELNLWENKLTTLPQEIG-NLQYLQKLDLGFNKI 95

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
            +LP+ +  L SL+ L+   N L +LP+++ NL +L+ L +  N      LP  IG L +
Sbjct: 96  TVLPKEIGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLN--QFTALPEEIGKLQN 153

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L E++ S N++TTLP  IG L+ LQ+L L  N L + P+++
Sbjct: 154 LQEMESSKNQLTTLPKEIGNLQNLQELYLNENQLTALPIEI 194



 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L + T +RVL      L +LPE++  L NL+ LN+ +N   L TLP  IG L  L 
Sbjct: 29  LNEALQNPTQVRVLYLNGKKLTALPEEIGKLQNLQELNLWEN--KLTTLPQEIGNLQYLQ 86

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +LD+ +NKIT LP  IG L+ LQ+L+L  N L + P ++
Sbjct: 87  KLDLGFNKITVLPKEIGQLQSLQELNLSFNQLATLPKEI 125


>gi|418693084|ref|ZP_13254147.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400356742|gb|EJP12900.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 738

 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 109/176 (61%), Gaps = 3/176 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  N+L  LPN IG L  L+ L +  N L + PK I   ++L+ LN   N+L  LP  
Sbjct: 99  LDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVE 158

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L NL+ L++  N++ +LP+ +  L +L+ L+ + N L +LP ++  L NL+ L +S
Sbjct: 159 IG-RLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLS 217

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           +N   L T P  IG L +L ELD++ N++ TLP  IG L+KL+KL+L+GN + + P
Sbjct: 218 EN--QLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLP 271



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/186 (40%), Positives = 105/186 (56%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L +  NQL   P  I  L KL+ LD+S N L  LP  I   ++L+EL    NK
Sbjct: 69  KLKNLQKLYLFDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNK 128

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L   P  IG +L NL+TL++  N++  LP  +  L +L  L+ R N L  LP+++  L N
Sbjct: 129 LITFPKEIG-QLQNLQTLNLQDNQLATLPVEIGRLQNLEKLNLRKNRLTVLPKEIGQLQN 187

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ LN+  N   L TLP  IG L +L  L +S N++TT P  IG L  LQ+L L GN L 
Sbjct: 188 LQTLNLQDN--QLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLK 245

Query: 189 SPPMDV 194
           + P ++
Sbjct: 246 TLPKEI 251



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 106/189 (56%), Gaps = 17/189 (8%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  NQL  LP  IG L  L+ L +S N L + PK I    +L+EL+ N N
Sbjct: 183 GQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGN 242

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG +L  L+ L+++ N+I  LP+               N L +LP ++  L 
Sbjct: 243 QLKTLPKEIG-QLQKLEKLNLDGNQITTLPKG--------------NQLTTLPAEIGQLK 287

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L++S N   L TLP  IG L +L  LD+  N++TTLP  I  L+ L++L L GN L
Sbjct: 288 NLQILSLSYN--RLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKL 345

Query: 188 VSPPMDVVE 196
              P ++ E
Sbjct: 346 TIVPKEIWE 354



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 114/223 (51%), Gaps = 30/223 (13%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+P  +  RL N+  L ++ N+L   P  IG L  L+ L++  N L +LP  I   ++LE
Sbjct: 108 MLPNEI-GRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGRLQNLE 166

Query: 61  ELNANFNKLRQLPDTIG----------------------FELINLKTLSINCNKIVILPQ 98
           +LN   N+L  LP  IG                       +L NL+TL ++ N++   P+
Sbjct: 167 KLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPK 226

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN-------FQYLETLPYSIGLL 151
            +  L +L+ LD   N LK+LP+++  L  LE LN+  N          L TLP  IG L
Sbjct: 227 EIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQL 286

Query: 152 MSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            +L  L +SYN++ TLP  IG L+ L+ L L GN L + P ++
Sbjct: 287 KNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREI 329



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/189 (39%), Positives = 108/189 (57%), Gaps = 10/189 (5%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTI---ENCRSLEELNAN 65
           RL N+  L ++   L  LP  I  L  L+ L +  N L+SLPK I    N RSL+ + AN
Sbjct: 543 RLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLD-IGAN 601

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
            N+   LP  I   L NL++L +N N+  I P+ +  L  L +L+   N L +LPE +  
Sbjct: 602 -NEFEVLPKEIA-RLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 659

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L  L++L++S N   L TLP  IG L +L EL + YN+I TLP+ I  L+ L+KL+L  N
Sbjct: 660 LKGLQMLDLSHN--RLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYEN 717

Query: 186 PLVSPPMDV 194
           P+  PP ++
Sbjct: 718 PI--PPQEL 724



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 102/184 (55%), Gaps = 3/184 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L +  N+L  LP  IG L  LK LD+ GN L +LP+ I   ++L+EL  N N
Sbjct: 284 GQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGN 343

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  +P  I +EL NL  L +  N+I  LP+ +    +L+ L+ R N L +LP ++    
Sbjct: 344 KLTIVPKEI-WELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIG--E 400

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
              +  ++     ++ LP  IG L +L   ++S NK+ ++P  IG L+ L+ L LE N L
Sbjct: 401 LKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQL 460

Query: 188 VSPP 191
            + P
Sbjct: 461 KTLP 464



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 1/102 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ARL N+  L ++ N+ K  P  I  L KL +L+V+ N L++LP+ I   + L+ L+ + N
Sbjct: 612 ARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHN 671

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           +L  LP  IG +L NL  L +  N+I  LP+ +  L +LR L
Sbjct: 672 RLTTLPSEIG-QLHNLTELYLQYNRIKTLPEEIARLQNLRKL 712



 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 3/94 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +V+L+V++NQL  LP  IG L  L++LD+S N L +LP  I    +L EL   +N+++ L
Sbjct: 640 LVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTL 699

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSL 106
           P+ I   L NL+ L++  N I   PQ L  +  L
Sbjct: 700 PEEIA-RLQNLRKLTLYENPIP--PQELDKIRKL 730



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 2/114 (1%)

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
           +N++ L ++      LP+ +  L +L+ L    N L + P  +  L  LE L++S+N   
Sbjct: 48  LNVRVLDLSGQNFTTLPKEIEKLKNLQKLYLFDNQLATFPAVIVELQKLESLDLSEN--R 105

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L  LP  IG L +L EL +  NK+ T P  IG L+ LQ L+L+ N L + P+++
Sbjct: 106 LVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEI 159



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +  ++RVLD       +LP+++E L NL+ L +  N   L T P  I  L  L 
Sbjct: 40  LTKALQNPLNVRVLDLSGQNFTTLPKEIEKLKNLQKLYLFDN--QLATFPAVIVELQKLE 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LD+S N++  LP+ IG L+ LQ+L L  N L++ P ++
Sbjct: 98  SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEI 136


>gi|421087864|ref|ZP_15548699.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102567|ref|ZP_15563171.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410367681|gb|EKP23065.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410429605|gb|EKP73981.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 242

 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 115/184 (62%), Gaps = 5/184 (2%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V +L +   +L  LP  I  L  L++LD+  N  +++PK IE  ++L+ L+  +N+ +
Sbjct: 50  LDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYNQFK 109

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            +P  IG +L NL+ L+++ N++  LP+ +    +L+VL+   N LK+LP+ +E L NL+
Sbjct: 110 TVPKKIG-QLKNLQVLNLSSNQLTTLPKEIGKPENLQVLNLGSNRLKTLPKGIEQLKNLQ 168

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +  N+  L TLP  IG L SL EL + +N+I TLPD I  L+ L+KL+L  NP+  P
Sbjct: 169 TLYL--NYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQNLRKLTLYENPI--P 224

Query: 191 PMDV 194
           P ++
Sbjct: 225 PQEL 228



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 78/129 (60%), Gaps = 1/129 (0%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ +LD+  NQ K +P  IG L  L+VL++S N L +LPK I    +L+ LN   N+
Sbjct: 94  QLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKPENLQVLNLGSNR 153

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L+ LP  I  +L NL+TL +N N++  LP+ +  L SL  L  + N + +LP+++  L N
Sbjct: 154 LKTLPKGIE-QLKNLQTLYLNYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQN 212

Query: 129 LEVLNISQN 137
           L  L + +N
Sbjct: 213 LRKLTLYEN 221



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 1/102 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL++ SNQL  LP  IG    L+VL++  N L++LPK IE  ++L+ L  N+N
Sbjct: 116 GQLKNLQVLNLSSNQLTTLPKEIGKPENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYN 175

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           +L  LP  IG  L +L  L +  N+I  LP  +  L +LR L
Sbjct: 176 QLTTLPREIG-RLQSLTELHLQHNQIATLPDEIIQLQNLRKL 216



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R+L      L +LP+ +E L NL++L++  N    +T+P  I  L +L 
Sbjct: 42  LTEALQNSLDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYN--QFKTVPKEIEQLKNLQ 99

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LD+ YN+  T+P  IG L+ LQ L+L  N L + P ++
Sbjct: 100 MLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEI 138



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L E L+N +++ +L +S+  Q L TLP  I  L +L  LD+ YN+  T+P  I  L+ 
Sbjct: 40  RDLTEALQNSLDVRILILSE--QKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKN 97

Query: 177 LQKLSLEGNPLVSPPMDV 194
           LQ L L  N   + P  +
Sbjct: 98  LQMLDLCYNQFKTVPKKI 115


>gi|45657379|ref|YP_001465.1| hypothetical protein [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|45600618|gb|AAS70102.1| cytoplasmic membrane protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 266

 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 115/184 (62%), Gaps = 5/184 (2%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V +L +   +L  LP  I  L  L++LD+  N  +++PK IE  ++L+ L+  +N+ +
Sbjct: 74  LDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYNQFK 133

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            +P  IG +L NL+ L+++ N++  LP+ +    +L+VL+   N LK+LP+ +E L NL+
Sbjct: 134 TVPKKIG-QLKNLQVLNLSSNQLTTLPKEIGKPENLQVLNLGSNRLKTLPKGIEQLKNLQ 192

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +  N+  L TLP  IG L SL EL + +N+I TLPD I  L+ L+KL+L  NP+  P
Sbjct: 193 TLYL--NYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQNLRKLTLYENPI--P 248

Query: 191 PMDV 194
           P ++
Sbjct: 249 PQEL 252



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 78/129 (60%), Gaps = 1/129 (0%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ +LD+  NQ K +P  IG L  L+VL++S N L +LPK I    +L+ LN   N+
Sbjct: 118 QLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKPENLQVLNLGSNR 177

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L+ LP  I  +L NL+TL +N N++  LP+ +  L SL  L  + N + +LP+++  L N
Sbjct: 178 LKTLPKGIE-QLKNLQTLYLNYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQN 236

Query: 129 LEVLNISQN 137
           L  L + +N
Sbjct: 237 LRKLTLYEN 245



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 1/102 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL++ SNQL  LP  IG    L+VL++  N L++LPK IE  ++L+ L  N+N
Sbjct: 140 GQLKNLQVLNLSSNQLTTLPKEIGKPENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYN 199

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           +L  LP  IG  L +L  L +  N+I  LP  +  L +LR L
Sbjct: 200 QLTTLPREIG-RLQSLTELHLQHNQIATLPDEIIQLQNLRKL 240



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R+L      L +LP+ +E L NL++L++  N    +T+P  I  L +L 
Sbjct: 66  LTEALQNSLDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYN--QFKTVPKEIEQLKNLQ 123

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LD+ YN+  T+P  IG L+ LQ L+L  N L + P ++
Sbjct: 124 MLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEI 162



 Score = 40.4 bits (93), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L E L+N +++ +L +S+  Q L TLP  I  L +L  LD+ YN+  T+P  I  L+ 
Sbjct: 64  RDLTEALQNSLDVRILILSE--QKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKN 121

Query: 177 LQKLSLEGNPLVSPPMDV 194
           LQ L L  N   + P  +
Sbjct: 122 LQMLDLCYNQFKTVPKKI 139


>gi|456865424|gb|EMF83758.1| leucine rich repeat protein [Leptospira weilii serovar Topaz str.
           LT2116]
          Length = 230

 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/180 (40%), Positives = 109/180 (60%), Gaps = 3/180 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V +LD+ SNQL   P   G L KL++L +  N L+ LPK I   + L+EL+ N N+L  
Sbjct: 49  DVQILDLSSNQLITFPKEFGKLKKLQILYLRNNQLKKLPKEIGELKELQELDLNHNQLET 108

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP   G +L +L+ L ++ N++  LP+ +  L +L+VL    N L++LP+++  L NL+V
Sbjct: 109 LPKEFG-KLKSLQRLYLDNNQLQALPKEIGKLKNLQVLYLDNNQLQALPKEIGKLKNLQV 167

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L ++ N   L+TLP  I  L  L ELD + N +TTLP  IG L+ L++L L  N L + P
Sbjct: 168 LYLNDN--QLKTLPKEIEYLQKLRELDSANNPLTTLPKEIGYLKNLEELILSNNELTTLP 225



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 102/164 (62%), Gaps = 3/164 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  + +L + +NQLK LP  IG L +L+ LD++ N LE+LPK     +SL+ L  + N
Sbjct: 68  GKLKKLQILYLRNNQLKKLPKEIGELKELQELDLNHNQLETLPKEFGKLKSLQRLYLDNN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG +L NL+ L ++ N++  LP+ +  L +L+VL    N LK+LP+++E L 
Sbjct: 128 QLQALPKEIG-KLKNLQVLYLDNNQLQALPKEIGKLKNLQVLYLNDNQLKTLPKEIEYLQ 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
            L  L+ + N   L TLP  IG L +L EL +S N++TTLP  +
Sbjct: 187 KLRELDSANN--PLTTLPKEIGYLKNLEELILSNNELTTLPKKL 228



 Score = 81.6 bits (200), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/159 (36%), Positives = 93/159 (58%), Gaps = 3/159 (1%)

Query: 36  LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           +++LD+S N L + PK     + L+ L    N+L++LP  IG EL  L+ L +N N++  
Sbjct: 50  VQILDLSSNQLITFPKEFGKLKKLQILYLRNNQLKKLPKEIG-ELKELQELDLNHNQLET 108

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           LP+    L SL+ L    N L++LP+++  L NL+VL +  N   L+ LP  IG L +L 
Sbjct: 109 LPKEFGKLKSLQRLYLDNNQLQALPKEIGKLKNLQVLYLDNN--QLQALPKEIGKLKNLQ 166

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L ++ N++ TLP  I  L+KL++L    NPL + P ++
Sbjct: 167 VLYLNDNQLKTLPKEIEYLQKLRELDSANNPLTTLPKEI 205



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 65/113 (57%), Gaps = 2/113 (1%)

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           +++ L ++ N+++  P+    L  L++L  R N LK LP+++  L  L+ L+++ N   L
Sbjct: 49  DVQILDLSSNQLITFPKEFGKLKKLQILYLRNNQLKKLPKEIGELKELQELDLNHN--QL 106

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           ETLP   G L SL  L +  N++  LP  IG L+ LQ L L+ N L + P ++
Sbjct: 107 ETLPKEFGKLKSLQRLYLDNNQLQALPKEIGKLKNLQVLYLDNNQLQALPKEI 159



 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/118 (36%), Positives = 67/118 (56%), Gaps = 1/118 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++  L + +NQL+ LP  IG L  L+VL +  N L++LPK I   ++L+ L  N N
Sbjct: 114 GKLKSLQRLYLDNNQLQALPKEIGKLKNLQVLYLDNNQLQALPKEIGKLKNLQVLYLNDN 173

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
           +L+ LP  I + L  L+ L    N +  LP+ + +L +L  L    N L +LP+ LEN
Sbjct: 174 QLKTLPKEIEY-LQKLRELDSANNPLTTLPKEIGYLKNLEELILSNNELTTLPKKLEN 230



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +++LD   N L + P++   L  L++L +  N   L+ LP  IG L  L 
Sbjct: 40  LTEALQNPEDVQILDLSSNQLITFPKEFGKLKKLQILYLRNN--QLKKLPKEIGELKELQ 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           ELD+++N++ TLP   G L+ LQ+L L+ N L + P ++
Sbjct: 98  ELDLNHNQLETLPKEFGKLKSLQRLYLDNNQLQALPKEI 136


>gi|421090942|ref|ZP_15551731.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410000269|gb|EKO50914.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 400

 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 113/187 (60%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  L +  NQLK LP  IG L  L+VL++  N L++LP+ IE  ++L+ L  ++N
Sbjct: 66  GRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQLKTLPEEIEQLKNLQRLYLSYN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  I  +L NL+ L +  N++  LP  +  L +L+ L    N L +LPE++  L 
Sbjct: 126 QLKTLPKEIR-QLQNLQELYLRDNQLTTLPTEIGQLKNLQRLHLWNNQLMTLPEEIGQLK 184

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+VL +S N   ++T+P  I  L  L  L +  N++T LP+ IG L+KLQ+LSL  N L
Sbjct: 185 NLQVLELSYN--QIKTIPKEIEKLQKLQSLGLGNNQLTALPNEIGQLQKLQELSLSTNRL 242

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 243 TTLPNEI 249



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 112/193 (58%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L N+ VL++  NQ+K +P  I  L KL+ L +  N L +LP  I   + L+E
Sbjct: 176 LPEEI-GQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEIGQLQKLQE 234

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L  LP+ IG +L NL+ L +  N++ ILP  +  L +L+ L  R N L +L +
Sbjct: 235 LSLSTNRLTTLPNEIG-QLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSK 293

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           D+E L NL+ L++  N   L T P  I  L +L  LD+  N++TTLP  IG L+ LQ   
Sbjct: 294 DIEQLQNLKSLDLWNN--QLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFE 351

Query: 182 LEGNPLVSPPMDV 194
           L  N L + P ++
Sbjct: 352 LNNNQLTTLPKEI 364



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/206 (36%), Positives = 119/206 (57%), Gaps = 4/206 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L  +  L + +NQL  LPN IG L KL+ L +S N L +LP  I   ++L++
Sbjct: 199 IPKEI-EKLQKLQSLGLGNNQLTALPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQNLQD 257

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+L  LP+ IG +L NL+TL +  N++  L + +  L +L+ LD   N L + P+
Sbjct: 258 LYLGSNQLTILPNEIG-QLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPK 316

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++E L NL+VL++  N   L TLP  IG L +L   +++ N++TTLP  IG L+ LQ+L 
Sbjct: 317 EIEQLKNLQVLDLGSN--QLTTLPKEIGQLKNLQVFELNNNQLTTLPKEIGQLQNLQELY 374

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLS 207
           L  N L S   + + + L   + Y  
Sbjct: 375 LIDNQLSSEEKERIRKLLPKCQIYFE 400



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/184 (39%), Positives = 110/184 (59%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VLD+   +LK LP  IG L  L+ L +S N L++LPK I   ++L  L    N+L+
Sbjct: 46  LDVRVLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQLK 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ I  +L NL+ L ++ N++  LP+ +  L +L+ L  R N L +LP ++  L NL+
Sbjct: 106 TLPEEIE-QLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQ 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++  N   L TLP  IG L +L  L++SYN+I T+P  I  L+KLQ L L  N L + 
Sbjct: 165 RLHLWNN--QLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTAL 222

Query: 191 PMDV 194
           P ++
Sbjct: 223 PNEI 226



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 48  SLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
            L + I+N   +  L+ +  KL+ LP  IG  L NL+ L ++ N++  LP+ +  L +LR
Sbjct: 37  DLTEAIQNPLDVRVLDLSQQKLKTLPKEIG-RLQNLQELYLSYNQLKTLPKEIGQLQNLR 95

Query: 108 VLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
           VL+   N LK+LPE++E L NL+ L +S N   L+TLP  I  L +L EL +  N++TTL
Sbjct: 96  VLELIHNQLKTLPEEIEQLKNLQRLYLSYN--QLKTLPKEIRQLQNLQELYLRDNQLTTL 153

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P  IG L+ LQ+L L  N L++ P ++
Sbjct: 154 PTEIGQLKNLQRLHLWNNQLMTLPEEI 180


>gi|359683238|ref|ZP_09253239.1| hypothetical protein Lsan2_00495 [Leptospira santarosai str.
           2000030832]
          Length = 245

 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/192 (38%), Positives = 112/192 (58%), Gaps = 3/192 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V VL +  NQL   P  IG L  L+VL +S   L  +PK + N ++L+ L+   N+L+ 
Sbjct: 50  DVRVLSLVHNQLTTFPKEIGQLQNLQVLSLSYGQLTIIPKEVGNLKNLQTLDLAENQLKT 109

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG  L NL+ L +  N++  LP+ +  L +L+ L    N LK+LP+++ NL NL+ 
Sbjct: 110 LPKEIG-NLQNLQWLDLGYNQLTTLPEEIGKLQNLQELHLYENQLKTLPKEIGNLQNLQW 168

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L++  N   L TLP  IG L +L EL +  N++T LP+ I  L+ LQ L + GNP + P 
Sbjct: 169 LDLGYN--QLTTLPEEIGKLQNLQELHLYENQLTKLPNEIVNLKNLQTLDVSGNPALIPQ 226

Query: 192 MDVVEQGLSAVK 203
            D +++ L  VK
Sbjct: 227 KDKIKKLLPNVK 238



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 107/178 (60%), Gaps = 7/178 (3%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           V+ N  K L N     + ++VL +  N L + PK I   ++L+ L+ ++ +L  +P  +G
Sbjct: 37  VYYNLAKALQNP----TDVRVLSLVHNQLTTFPKEIGQLQNLQVLSLSYGQLTIIPKEVG 92

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
             L NL+TL +  N++  LP+ + +L +L+ LD   N L +LPE++  L NL+ L++ +N
Sbjct: 93  -NLKNLQTLDLAENQLKTLPKEIGNLQNLQWLDLGYNQLTTLPEEIGKLQNLQELHLYEN 151

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
              L+TLP  IG L +L  LD+ YN++TTLP+ IG L+ LQ+L L  N L   P ++V
Sbjct: 152 --QLKTLPKEIGNLQNLQWLDLGYNQLTTLPEEIGKLQNLQELHLYENQLTKLPNEIV 207


>gi|418678197|ref|ZP_13239471.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|418686545|ref|ZP_13247711.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|418740868|ref|ZP_13297244.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|400321387|gb|EJO69247.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|410738978|gb|EKQ83710.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410751463|gb|EKR08440.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 400

 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 113/187 (60%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  L +  NQLK LP  IG L  L+VL++  N L++LP+ IE  ++L+ L  ++N
Sbjct: 66  GRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQLKTLPEEIEQLKNLQRLYLSYN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  I  +L NL+ L +  N++  LP  +  L +L+ L    N L +LPE++  L 
Sbjct: 126 QLKTLPKEIR-QLQNLQELYLRDNQLTTLPTEIGQLKNLQRLHLWNNQLMTLPEEIGQLK 184

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+VL +S N   ++T+P  I  L  L  L +  N++T LP+ IG L+KLQ+LSL  N L
Sbjct: 185 NLQVLELSYN--QIKTIPKEIEKLQKLQSLGLGNNQLTALPNEIGQLQKLQELSLSTNRL 242

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 243 TTLPNEI 249



 Score =  107 bits (266), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 112/193 (58%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L N+ VL++  NQ+K +P  I  L KL+ L +  N L +LP  I   + L+E
Sbjct: 176 LPEEI-GQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEIGQLQKLQE 234

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L  LP+ IG +L NL+ L +  N++ ILP  +  L +L+ L  R N L +L +
Sbjct: 235 LSLSTNRLTTLPNEIG-QLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSK 293

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           D+E L NL+ L++  N   L T P  I  L +L  LD+  N++TTLP  IG L+ LQ   
Sbjct: 294 DIEQLQNLKSLDLWNN--QLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFE 351

Query: 182 LEGNPLVSPPMDV 194
           L  N L + P ++
Sbjct: 352 LNNNQLTTLPNEI 364



 Score =  107 bits (266), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 76/206 (36%), Positives = 120/206 (58%), Gaps = 4/206 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L  +  L + +NQL  LPN IG L KL+ L +S N L +LP  I   ++L++
Sbjct: 199 IPKEI-EKLQKLQSLGLGNNQLTALPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQNLQD 257

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+L  LP+ IG +L NL+TL +  N++  L + +  L +L+ LD   N L + P+
Sbjct: 258 LYLGSNQLTILPNEIG-QLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPK 316

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++E L NL+VL++  N   L TLP  IG L +L   +++ N++TTLP+ IG L+ LQ+L 
Sbjct: 317 EIEQLKNLQVLDLGSN--QLTTLPKEIGQLKNLQVFELNNNQLTTLPNEIGQLQNLQELY 374

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLS 207
           L  N L S   + + + L   + Y  
Sbjct: 375 LIDNQLSSEEKERIRKLLPKCQIYFE 400



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/184 (39%), Positives = 110/184 (59%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VLD+   +LK LP  IG L  L+ L +S N L++LPK I   ++L  L    N+L+
Sbjct: 46  LDVRVLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQLK 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ I  +L NL+ L ++ N++  LP+ +  L +L+ L  R N L +LP ++  L NL+
Sbjct: 106 TLPEEIE-QLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQ 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++  N   L TLP  IG L +L  L++SYN+I T+P  I  L+KLQ L L  N L + 
Sbjct: 165 RLHLWNN--QLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTAL 222

Query: 191 PMDV 194
           P ++
Sbjct: 223 PNEI 226



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 48  SLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
            L + I+N   +  L+ +  KL+ LP  IG  L NL+ L ++ N++  LP+ +  L +LR
Sbjct: 37  DLTEAIQNPLDVRVLDLSQQKLKTLPKEIG-RLQNLQELYLSYNQLKTLPKEIGQLQNLR 95

Query: 108 VLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
           VL+   N LK+LPE++E L NL+ L +S N   L+TLP  I  L +L EL +  N++TTL
Sbjct: 96  VLELIHNQLKTLPEEIEQLKNLQRLYLSYN--QLKTLPKEIRQLQNLQELYLRDNQLTTL 153

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P  IG L+ LQ+L L  N L++ P ++
Sbjct: 154 PTEIGQLKNLQRLHLWNNQLMTLPEEI 180


>gi|124006408|ref|ZP_01691242.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123988065|gb|EAY27736.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 399

 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/188 (38%), Positives = 116/188 (61%), Gaps = 3/188 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RL  ++VL V  N+++ LP++I  L +L+ L  + N L +LP++I   + L EL  N N 
Sbjct: 44  RLPGLLVLGVSGNKIEVLPSTIDKLQQLEELWFNHNHLHTLPESIGKLKKLHELWLNHNH 103

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L +LP++IG EL +L+ L ++ N++ +LP+S+  L  L +L+   N L  LPE +  L N
Sbjct: 104 LTKLPESIG-ELDHLEDLWLDHNQLTVLPESIGKLEHLGILNLGHNDLIELPESISKLQN 162

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +++N   L  LP SIGLL +L  LD   N++ ++P+ IG L+ L+ LS++GN L 
Sbjct: 163 LKSLYLNKN--KLAVLPESIGLLQNLQYLDAQSNRLQSIPEEIGQLKNLKYLSVDGNHLA 220

Query: 189 SPPMDVVE 196
             P  + E
Sbjct: 221 VVPESIGE 228



 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 113/193 (58%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+ ++L N+  L ++ N+L  LP SIG L  L+ LD   N L+S+P+ I   ++L+ 
Sbjct: 153 LPESI-SKLQNLKSLYLNKNKLAVLPESIGLLQNLQYLDAQSNRLQSIPEEIGQLKNLKY 211

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N L  +P++IG EL +LK L ++ N++  LP S+  L +L+ L    N L  LP 
Sbjct: 212 LSVDGNHLAVVPESIG-ELEHLKELHLSHNRLTFLPASIAQLKTLKDLYLLYNKLTGLPP 270

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
               L +L+ +N+S N   + T P +I  L  L  L +  N++T+LP ++G L +L+ LS
Sbjct: 271 GFGKLQHLKDINLSHN--RITTFPIAITKLTQLKSLALDSNQLTSLPANVGNLEQLEVLS 328

Query: 182 LEGNPLVSPPMDV 194
           L  N L+  P  +
Sbjct: 329 LNDNQLIKLPKSI 341



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 114/209 (54%), Gaps = 25/209 (11%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++PES+   L N+  LD  SN+L+ +P  IG L  LK L V GN L  +P++I     L+
Sbjct: 175 VLPESI-GLLQNLQYLDAQSNRLQSIPEEIGQLKNLKYLSVDGNHLAVVPESIGELEHLK 233

Query: 61  ELNANFNKLRQLPDTI---------------------GF-ELINLKTLSINCNKIVILPQ 98
           EL+ + N+L  LP +I                     GF +L +LK ++++ N+I   P 
Sbjct: 234 ELHLSHNRLTFLPASIAQLKTLKDLYLLYNKLTGLPPGFGKLQHLKDINLSHNRITTFPI 293

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
           ++T LT L+ L    N L SLP ++ NL  LEVL+++ N   L  LP SIG L +L  L 
Sbjct: 294 AITKLTQLKSLALDSNQLTSLPANVGNLEQLEVLSLNDN--QLIKLPKSIGKLTNLTTLS 351

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +  NK+T +P  I  L  L+ L LEGNP+
Sbjct: 352 LINNKLTDVPIEIQNLPNLEYLVLEGNPI 380


>gi|456982733|gb|EMG19248.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 299

 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 117/193 (60%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L N+  LD+ +N+L  LP  IG L  L+ LD+S N L +LP+ I + ++L+E
Sbjct: 78  LPQEI-GQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQE 136

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+L  LP+ IG +L NL+TL++  N++  L + +  L +L+ LD R N L   P+
Sbjct: 137 LYLVSNQLTILPNEIG-QLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPK 195

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L NL+VL++  N   L TLP  IG L +L  LD+  N++TTLP  I  L+ LQ L 
Sbjct: 196 EIGQLKNLQVLDLGSN--QLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLD 253

Query: 182 LEGNPLVSPPMDV 194
           L  N L + P ++
Sbjct: 254 LSYNQLKTLPKEI 266



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 114/193 (59%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L  +  L + +NQL  LP  IG L  L+ LD+S N L +LP+ I   ++L+ 
Sbjct: 55  IPKEI-EKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQS 113

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L  LP  IG  L NL+ L +  N++ ILP  +  L +L+ L+ R N L +L +
Sbjct: 114 LDLSTNRLTTLPQEIGH-LQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSK 172

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++E L NL+ L++  N   L   P  IG L +L  LD+  N++TTLP+ IG L+ LQ L 
Sbjct: 173 EIEQLQNLKSLDLRSN--QLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLD 230

Query: 182 LEGNPLVSPPMDV 194
           L+ N L + P ++
Sbjct: 231 LDSNQLTTLPQEI 243



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/170 (38%), Positives = 105/170 (61%), Gaps = 3/170 (1%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +NQL  LP  IG L KL+ L +  N L +LP+ I   ++L+ LN ++N+++ +P  I  +
Sbjct: 3   NNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIE-K 61

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L  L++L ++ N++  LPQ +  L +L+ LD   N L +LP+++  L NL+ L++S N  
Sbjct: 62  LQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTN-- 119

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
            L TLP  IG L +L EL +  N++T LP+ IG L+ LQ L+L  N L +
Sbjct: 120 RLTTLPQEIGHLQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTT 169



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/176 (37%), Positives = 105/176 (59%), Gaps = 4/176 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +   L N+  L + SNQL  LPN IG L  L+ L++  N L +L K IE  ++L+ 
Sbjct: 124 LPQEI-GHLQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKS 182

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+L   P  IG +L NL+ L +  N++  LP+ +  L +L+ LD   N L +LP+
Sbjct: 183 LDLRSNQLTIFPKEIG-QLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQ 241

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
           +++ L NL++L++S  +  L+TLP  I  L +L  L + YN++T LP  IG L+ L
Sbjct: 242 EIKQLKNLQLLDLS--YNQLKTLPKEIEQLKNLQTLYLGYNQLTVLPKEIGQLQNL 295



 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 66/174 (37%), Positives = 102/174 (58%), Gaps = 3/174 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           NQL  LP  IG L  LK L++S N ++++PK IE  + L+ L  + N+L  LP  IG +L
Sbjct: 27  NQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIG-QL 85

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            NL++L ++ N++  LPQ +  L +L+ LD   N L +LP+++ +L NL+ L +  N   
Sbjct: 86  QNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSN--Q 143

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L  LP  IG L +L  L++  N++TTL   I  L+ L+ L L  N L   P ++
Sbjct: 144 LTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEI 197



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 103/212 (48%), Gaps = 26/212 (12%)

Query: 67  NKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENL 126
           N+L  LP  IG +L  L+ L +  N++  LPQ +  L +L+ L+   N +K++P+++E L
Sbjct: 4   NQLTTLPQEIG-QLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKL 62

Query: 127 INLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
             L+ L +  N   L TLP  IG L +L  LD+S N++TTLP  IG L+ LQ L L  N 
Sbjct: 63  QKLQSLGLDNN--QLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNR 120

Query: 187 LVSPPMDVVE----QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGALRNHR-- 240
           L + P ++      Q L  V   L+   N           +G+L    T N  LRN+R  
Sbjct: 121 LTTLPQEIGHLQNLQELYLVSNQLTILPNE----------IGQLKNLQTLN--LRNNRLT 168

Query: 241 -----SEERERFIMSDFRAIDGLASPRHIGMF 267
                 E+ +     D R+      P+ IG  
Sbjct: 169 TLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQL 200



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/102 (40%), Positives = 67/102 (65%), Gaps = 1/102 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VLD+ SNQL  LP  IG L  L+ LD+  N L +LP+ I+  ++L+ L+ ++N
Sbjct: 198 GQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYN 257

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           +L+ LP  I  +L NL+TL +  N++ +LP+ +  L +L+VL
Sbjct: 258 QLKTLPKEIE-QLKNLQTLYLGYNQLTVLPKEIGQLQNLKVL 298



 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 54/85 (63%), Gaps = 2/85 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L N+  LD+ SNQL  LP  I  L  L++LD+S N L++LPK IE  ++L+ 
Sbjct: 216 LPEGI-GQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQT 274

Query: 62  LNANFNKLRQLPDTIGFELINLKTL 86
           L   +N+L  LP  IG +L NLK L
Sbjct: 275 LYLGYNQLTVLPKEIG-QLQNLKVL 298


>gi|456823237|gb|EMF71707.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 391

 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/207 (37%), Positives = 120/207 (57%), Gaps = 4/207 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L  +  L + +NQL  LP  IG L  L+ LD+S N L +LP+ I + ++L++
Sbjct: 178 IPKEI-EKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQD 236

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+L  LP+ IG +L NL+TL++  N++  L + +  L +L+ LD R N L   P+
Sbjct: 237 LYLVSNQLTILPNEIG-QLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPK 295

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L NL+VL++  N   L TLP  IG L +L  LD+  N++TTLP  IG L+ LQ+L 
Sbjct: 296 EIGQLKNLQVLDLGSN--QLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELF 353

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSE 208
           L  N L S      E    + K  L++
Sbjct: 354 LNNNQLSSQEKKEFENFFQSAKFTLTK 380



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 110/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L+++ NQL  LP  IG L  L+ L++S N ++++PK IE  + L+ L    N
Sbjct: 68  GKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L  L+ L +  N++  LPQ +  L +L+ L+   N +K++P+++E L 
Sbjct: 128 QLTTLPQEIG-QLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQ 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L +  N   L TLP  IG L +L  LD+S N++TTLP  IG L+ LQ L L  N L
Sbjct: 187 KLQSLGLDNN--QLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQL 244

Query: 188 VSPPMDV 194
              P ++
Sbjct: 245 TILPNEI 251



 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 140/270 (51%), Gaps = 30/270 (11%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V  LD+ +N+ K LP  IG L  L+ L+++ N L  LPK I   ++L +LN + N+++
Sbjct: 48  LKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIK 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            +P  I  +L  L++L +  N++  LPQ +  L  L+ L    N L +LP+++  L NL+
Sbjct: 108 TIPKEIE-KLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLK 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+S N   ++T+P  I  L  L  L +  N++TTLP  IG L+ LQ L L  N L + 
Sbjct: 167 SLNLSYN--QIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTL 224

Query: 191 PMDVVE----QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGALRNHR----SE 242
           P ++      Q L  V   L+   N           +G+L    T N  LRN+R    S+
Sbjct: 225 PQEIGHLQNLQDLYLVSNQLTILPNE----------IGQLKNLQTLN--LRNNRLTTLSK 272

Query: 243 ERERFIMSDFRAIDGLAS-----PRHIGMF 267
           E E+  + + +++D  ++     P+ IG  
Sbjct: 273 EIEQ--LQNLKSLDLRSNQLTIFPKEIGQL 300



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R LD   N  K+LP+++  L NL+ LN+++N   L  LP  IG L +L 
Sbjct: 40  LAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKN--QLTILPKEIGQLKNLR 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +L++S N+I T+P  I  L+KLQ L L  N L + P ++
Sbjct: 98  KLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEI 136


>gi|418678653|ref|ZP_13239927.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|400321843|gb|EJO69703.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
          Length = 263

 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/217 (37%), Positives = 123/217 (56%), Gaps = 8/217 (3%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VLD+   +LK LP  IG L  L+ LD+  NLL +LPK IE  ++L+ LN   ++L 
Sbjct: 44  LDVRVLDLSEQKLKTLPKEIGQLQNLQTLDLRNNLLTTLPKEIERLQNLQTLNLINSQLM 103

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG     L+ L ++ N++  LP+ +  L  LR L    N LK+LP ++  L NL+
Sbjct: 104 TLPKEIGQLQN-LQQLELDYNRLYTLPKEIGRLKKLRTLSLWGNRLKTLPNEIGQLQNLQ 162

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+  N   L+TLP  IG L +L  L +SYN++ TLP+ I  L+ LQ+L L  N L + 
Sbjct: 163 TLNLWNN--QLKTLPNEIGQLKNLQRLHLSYNQLKTLPNEIEQLQNLQELDLRNNLLTAL 220

Query: 191 PMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
           P     +G+  +K      + N+  S +++  + KL+
Sbjct: 221 P-----KGIGQLKNLQKLDLRNNELSSEEQGRIRKLL 252



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 66/111 (59%), Gaps = 1/111 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL  +  L +  N+LK LPN IG L  L+ L++  N L++LP  I   ++L+ L+ ++N
Sbjct: 133 GRLKKLRTLSLWGNRLKTLPNEIGQLQNLQTLNLWNNQLKTLPNEIGQLKNLQRLHLSYN 192

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKS 118
           +L+ LP+ I  +L NL+ L +  N +  LP+ +  L +L+ LD R N L S
Sbjct: 193 QLKTLPNEIE-QLQNLQELDLRNNLLTALPKGIGQLKNLQKLDLRNNELSS 242



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 65/120 (54%), Gaps = 21/120 (17%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS--------------QNFQYL 141
           L ++L +   +RVLD     LK+LP+++  L NL+ L++               QN Q L
Sbjct: 36  LTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQTLDLRNNLLTTLPKEIERLQNLQTL 95

Query: 142 E-------TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
                   TLP  IG L +L +L++ YN++ TLP  IG L+KL+ LSL GN L + P ++
Sbjct: 96  NLINSQLMTLPKEIGQLQNLQQLELDYNRLYTLPKEIGRLKKLRTLSLWGNRLKTLPNEI 155


>gi|418727704|ref|ZP_13286292.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409959062|gb|EKO22839.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 356

 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/184 (39%), Positives = 112/184 (60%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++ S +L  LP  I  L  LK LD++ N  ++LPK I   ++L+ELN   N+L+
Sbjct: 48  LDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLK 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG +L NL+TL ++ N++   PQ +  L +L+ L+   N L +L +++  L NL+
Sbjct: 108 NLPKEIG-QLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+ +N   L+ LP  IG L +L EL +S N++T LP+ IG L+ LQ L L  N L   
Sbjct: 167 KLNLDKN--RLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTIL 224

Query: 191 PMDV 194
           P ++
Sbjct: 225 PKEI 228



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 125/221 (56%), Gaps = 10/221 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  NQL  L   IG L  L+ L++  N L++LP  I   ++L+EL  + N
Sbjct: 137 GQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQELYLSNN 196

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+ L +  N++ ILP+ +  L +L++L +  N L  LP+++  L 
Sbjct: 197 QLTILPEEIG-QLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQ 255

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L +S N   L TLP  IG L +L EL ++ N++TTLP  IG L+ LQ      N L
Sbjct: 256 KLQYLYLSHN--QLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQL 313

Query: 188 VSPPMDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
              P ++ + Q L  +      K+NN+  S +++  + KL+
Sbjct: 314 TMLPQEIGQLQNLQWL------KLNNNQLSSQEEERIQKLL 348



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  N+L   P  IG L  L+ L++  N L +L + I   ++L++LN + N
Sbjct: 114 GQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKN 173

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP+ IG +L NL+ L ++ N++ ILP+ +  L +L+ L    N L  LP+++  L 
Sbjct: 174 RLKALPNEIG-QLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQ 232

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L    N   L  LP  IG L  L  L +S+N++TTLP  IG L  LQ+L L  N L
Sbjct: 233 NLKLLYSVNN--ELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQL 290

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 291 TTLPKEI 297



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 106/186 (56%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  LD+ +NQ K LP  IG L  L+ L++  N L++LPK I   ++L+ L  + N+
Sbjct: 69  QLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNLQTLILSVNR 128

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L   P  IG +L NL+ L+++ N++  L Q +  L +L+ L+   N LK+LP ++  L N
Sbjct: 129 LTTFPQEIG-QLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNEIGQLQN 187

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S N   L  LP  IG L +L  L +  N++T LP  IG L+ L+ L    N L 
Sbjct: 188 LQELYLSNN--QLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELT 245

Query: 189 SPPMDV 194
             P ++
Sbjct: 246 ILPQEI 251



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/200 (37%), Positives = 107/200 (53%), Gaps = 3/200 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  N+LK LPN IG L  L+ L +S N L  LP+ I   ++L+ L    N
Sbjct: 160 GQLKNLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDN 219

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NLK L    N++ ILPQ +  L  L+ L    N L +LP+++  L 
Sbjct: 220 QLTILPKEIG-QLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLE 278

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L ++ N   L TLP  IG L +L       N++T LP  IG L+ LQ L L  N L
Sbjct: 279 NLQELYLNDN--QLTTLPKEIGQLKNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQL 336

Query: 188 VSPPMDVVEQGLSAVKGYLS 207
            S   + +++ L   + Y  
Sbjct: 337 SSQEEERIQKLLPKCQIYFE 356



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVL+     L +LP++++ L NL+ L+++ N    +TLP  IG L +L 
Sbjct: 40  LTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANN--QFKTLPKEIGQLQNLQ 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           EL++  N++  LP  IG L+ LQ L L  N L + P ++
Sbjct: 98  ELNLWNNQLKNLPKEIGQLQNLQTLILSVNRLTTFPQEI 136


>gi|418744943|ref|ZP_13301288.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794274|gb|EKR92184.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 526

 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 110/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+ SNQL  LP  IG L  L+ L+++ N L +LP+ I   ++L+EL+   N
Sbjct: 166 GKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQELHLTDN 225

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L +N N++  LP+ +  L  L  L    N L +LP+++  L 
Sbjct: 226 QLTTLPKEIE-KLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKEIGKLQ 284

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +S N   L TLP  IG L  L EL +  N++TTLP  IG L+ LQ+L L+ N L
Sbjct: 285 NLQWLGLSNN--QLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDYNRL 342

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 343 TTLPEEI 349



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/172 (40%), Positives = 103/172 (59%), Gaps = 3/172 (1%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELIN 82
           L  LP  IG L  L+ LD+S N L +LPK I   ++L++LN   N+L  LP+ IG +L N
Sbjct: 158 LWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIG-KLQN 216

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           L+ L +  N++  LP+ +  L +L+ L    N L +LP+++  L  LE L++  N   L 
Sbjct: 217 LQELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENN--QLT 274

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           TLP  IG L +L  L +S N++TTLP  IG L+ LQ+L LE N L + P ++
Sbjct: 275 TLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEI 326



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 112/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + +NQL  LP  IG L  L+ L +  N L +LPK I   ++L+EL  ++N
Sbjct: 281 GKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDYN 340

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ I  +L  LK L  + N+   +P+ + +L +L+ L+   N L SLP+++ NL 
Sbjct: 341 RLTTLPEEIE-KLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQ 399

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L +S N   L TLP  IG L +L  L +S N++TTLP  IG L+ LQ+L L  N L
Sbjct: 400 NLQLLYLSDN--QLATLPKEIGKLQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLRDNQL 457

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 458 TTLPKEI 464



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/153 (37%), Positives = 90/153 (58%), Gaps = 3/153 (1%)

Query: 42  SGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLT 101
           S + L +LPK I   ++L +L+ + N+L  LP  IG +L NL+ L++  N++  LP+ + 
Sbjct: 154 SNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIG-KLQNLQKLNLTRNRLANLPEEIG 212

Query: 102 HLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSY 161
            L +L+ L    N L +LP+++E L NL+ L ++ N   L TLP  IG L  L  L +  
Sbjct: 213 KLQNLQELHLTDNQLTTLPKEIEKLQNLQWLGLNNN--QLTTLPKEIGKLQKLEALHLEN 270

Query: 162 NKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           N++TTLP  IG L+ LQ L L  N L + P ++
Sbjct: 271 NQLTTLPKEIGKLQNLQWLGLSNNQLTTLPKEI 303



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 2/134 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +   L N+  L+++SNQL  LP  IG L  L++L +S N L +LPK I   ++L+ 
Sbjct: 368 VPEEI-WNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQL 426

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+L  LP  IG +L NL+ L +  N++  LP+ + +L SL  L    N L S PE
Sbjct: 427 LYLSDNQLTTLPKEIG-KLQNLQELYLRDNQLTTLPKEIENLQSLEYLYLSDNPLTSFPE 485

Query: 122 DLENLINLEVLNIS 135
           ++  L +L+   + 
Sbjct: 486 EIGKLQHLKWFRLE 499



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 48/93 (51%), Gaps = 7/93 (7%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L +  NQL  LP  IG L  L+ L +  N L +LPK IEN +SLE L  + N
Sbjct: 419 GKLQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLRDNQLTTLPKEIENLQSLEYLYLSDN 478

Query: 68  KLRQLPDTIG-------FELINLKTLSINCNKI 93
            L   P+ IG       F L N+ TL     KI
Sbjct: 479 PLTSFPEEIGKLQHLKWFRLENIPTLLPQKEKI 511


>gi|260793208|ref|XP_002591604.1| hypothetical protein BRAFLDRAFT_223431 [Branchiostoma floridae]
 gi|229276813|gb|EEN47615.1| hypothetical protein BRAFLDRAFT_223431 [Branchiostoma floridae]
          Length = 889

 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 116/201 (57%), Gaps = 3/201 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L NV  LD+ + QL+ LP+++G L++L+ L +S N L++ P  +    + + L+    
Sbjct: 139 GQLTNVKHLDLWNCQLRTLPHNVGKLTQLEWLRLSSNPLQTFPAEVGQLINFKHLDLPEC 198

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +LR LP  +G  L  L+ L ++ N +  LP  + HLT+++ L      L +LP ++  L 
Sbjct: 199 QLRTLPPEVG-RLTQLERLDLSKNPLQTLPAEVGHLTNIKHLFLSWCQLDTLPPEVGRLT 257

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++S N   L+TLP  +G L ++  L +    + +LP  +G LR+L  L ++GNP 
Sbjct: 258 QLEWLSLSHN--PLQTLPVEVGQLSNIEHLILRNCHLQSLPPEVGKLRRLSDLDVKGNPF 315

Query: 188 VSPPMDVVEQGLSAVKGYLSE 208
           + PP +V  QG++A++ Y  E
Sbjct: 316 LKPPDEVCSQGVTAIRQYFDE 336



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 109/190 (57%), Gaps = 5/190 (2%)

Query: 6   LTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNAN 65
           +  R+ ++  LD+ + +L  L   +  ++KLK L++  N L++LP  +    +++ L+ +
Sbjct: 45  VAGRITDIKHLDLSNRRLTTLLPELFGMTKLKWLNLRDNPLQTLPVEVGQLINVKHLDLS 104

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNC-LKSLPEDLE 124
             KLR LP  +G  L +L+ L++  N +  LP  +  LT+++ LD   NC L++LP ++ 
Sbjct: 105 NCKLRTLPPIVG-GLTHLEWLNLAFNPLQTLPAEIGQLTNVKHLDL-WNCQLRTLPHNVG 162

Query: 125 NLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEG 184
            L  LE L +S N   L+T P  +G L++   LD+   ++ TLP  +G L +L++L L  
Sbjct: 163 KLTQLEWLRLSSN--PLQTFPAEVGQLINFKHLDLPECQLRTLPPEVGRLTQLERLDLSK 220

Query: 185 NPLVSPPMDV 194
           NPL + P +V
Sbjct: 221 NPLQTLPAEV 230


>gi|421108955|ref|ZP_15569484.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
 gi|410005922|gb|EKO59704.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
          Length = 400

 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 113/209 (54%), Gaps = 24/209 (11%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  NQLK LP  IG L  L+VL++  N L +LPK I   ++L+EL  N+N
Sbjct: 66  EQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVLELIHNQLTTLPKEIGRLQNLQELYLNYN 125

Query: 68  KLRQLPDTIGF----------------------ELINLKTLSINCNKIVILPQSLTHLTS 105
           +L  LP+ IG                       +L NL+TL +  N++  LP+ +  L +
Sbjct: 126 QLTILPNEIGQLKNLQRLHLFNNQLMTLPKEIGQLKNLQTLYLWNNQLTTLPKEIGQLKN 185

Query: 106 LRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
           L+V +   N L +LPE++  L NL+VL ++ N   L TLP  IG L +L  LD+ YN+ T
Sbjct: 186 LQVFELNNNQLTTLPEEIGKLKNLQVLELNNN--QLTTLPKEIGQLKNLQWLDLGYNQFT 243

Query: 166 TLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LP+ IG L+ LQ L L  N     P ++
Sbjct: 244 ILPEEIGKLKNLQVLHLHDNQFKIIPKEI 272



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/206 (35%), Positives = 119/206 (57%), Gaps = 4/206 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L N+ VL++++NQL  LP  IG L  L+ LD+  N    LP+ I   ++L+ 
Sbjct: 199 LPEEI-GKLKNLQVLELNNNQLTTLPKEIGQLKNLQWLDLGYNQFTILPEEIGKLKNLQV 257

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+ + +P  IG +L NL+ L ++ N+  I+P+ +  L +L++L    N  K +P+
Sbjct: 258 LHLHDNQFKIIPKEIG-KLKNLQVLHLHDNQFKIIPKEIGKLKNLKMLSLGYNQFKIIPK 316

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++E L NL+ LN+  N   L TLP  I  L +L EL +SYN+  TLP  IG L+ L+KL 
Sbjct: 317 EIEQLQNLQWLNLDAN--QLTTLPKEIEQLQNLQELYLSYNQFKTLPKEIGQLKNLKKLY 374

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLS 207
           L  + L S   + + + L   + Y  
Sbjct: 375 LNNHQLSSEEKERIRKLLPKCQIYFE 400



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/184 (39%), Positives = 107/184 (58%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VLD+   +LK LPN I  L  L+ L +S N L++LPK I   ++L  L    N+L 
Sbjct: 46  LDVRVLDLSEQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVLELIHNQLT 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG  L NL+ L +N N++ ILP  +  L +L+ L    N L +LP+++  L NL+
Sbjct: 106 TLPKEIG-RLQNLQELYLNYNQLTILPNEIGQLKNLQRLHLFNNQLMTLPKEIGQLKNLQ 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +  N   L TLP  IG L +L   +++ N++TTLP+ IG L+ LQ L L  N L + 
Sbjct: 165 TLYLWNN--QLTTLPKEIGQLKNLQVFELNNNQLTTLPEEIGKLKNLQVLELNNNQLTTL 222

Query: 191 PMDV 194
           P ++
Sbjct: 223 PKEI 226



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 79/132 (59%), Gaps = 2/132 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++PE +  +L N+ VL +H NQ K +P  IG L  L+VL +  N  + +PK I   ++L+
Sbjct: 244 ILPEEI-GKLKNLQVLHLHDNQFKIIPKEIGKLKNLQVLHLHDNQFKIIPKEIGKLKNLK 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+  +N+ + +P  I  +L NL+ L+++ N++  LP+ +  L +L+ L    N  K+LP
Sbjct: 303 MLSLGYNQFKIIPKEIE-QLQNLQWLNLDANQLTTLPKEIEQLQNLQELYLSYNQFKTLP 361

Query: 121 EDLENLINLEVL 132
           +++  L NL+ L
Sbjct: 362 KEIGQLKNLKKL 373


>gi|434388564|ref|YP_007099175.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
           PCC 6605]
 gi|428019554|gb|AFY95648.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
           PCC 6605]
          Length = 504

 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 110/176 (62%), Gaps = 3/176 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N  VLD+   +L+ LP +IG L+ L  L+++GN L SLP++I N  +L EL  N +KL  
Sbjct: 18  NSTVLDLRGYKLETLPENIGNLTHLTKLNLNGNRLTSLPESIGNLTNLTELYLNGHKLTN 77

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP++IG  L+NL  L +N +++  LP+S+ +LT+L  L    + LK+LPE + NL NL  
Sbjct: 78  LPESIG-NLVNLTRLDLNGDRLNGLPESVGNLTNLTALYLDGHKLKTLPESIGNLTNLTK 136

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           L ++  F  L +LP S   L++L +L +  N+   +PD + CL +L+K+ L  NPL
Sbjct: 137 LALNGGF--LHSLPDSFANLINLTKLKLGNNQFDRIPDILFCLPRLKKIYLRDNPL 190



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/154 (38%), Positives = 81/154 (52%), Gaps = 26/154 (16%)

Query: 38  VLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILP 97
           VLD+ G  LE+LP+ I N   L +LN N N+L  LP++IG  L NL  L +N +K+  LP
Sbjct: 21  VLDLRGYKLETLPENIGNLTHLTKLNLNGNRLTSLPESIG-NLTNLTELYLNGHKLTNLP 79

Query: 98  QSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVEL 157
           +S+ +L +L  LD   + L  LPE + NL NL  L       YL+               
Sbjct: 80  ESIGNLVNLTRLDLNGDRLNGLPESVGNLTNLTAL-------YLDG-------------- 118

Query: 158 DVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
               +K+ TLP+SIG L  L KL+L G  L S P
Sbjct: 119 ----HKLKTLPESIGNLTNLTKLALNGGFLHSLP 148



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 2/113 (1%)

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           N   L +   K+  LP+++ +LT L  L+   N L SLPE + NL NL  L +  N   L
Sbjct: 18  NSTVLDLRGYKLETLPENIGNLTHLTKLNLNGNRLTSLPESIGNLTNLTELYL--NGHKL 75

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L++L  LD++ +++  LP+S+G L  L  L L+G+ L + P  +
Sbjct: 76  TNLPESIGNLVNLTRLDLNGDRLNGLPESVGNLTNLTALYLDGHKLKTLPESI 128


>gi|380011078|ref|XP_003689640.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Apis florea]
          Length = 610

 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/182 (38%), Positives = 109/182 (59%), Gaps = 3/182 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L ++V   ++ N+L  LP  IGCL  L+ L +S N L SLP T+EN +SL  L+   NKL
Sbjct: 151 LTHLVEFYLYGNKLVTLPPEIGCLGNLETLALSENSLTSLPNTLENLKSLRVLDLRHNKL 210

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++PD + ++L NL TL +  N++  +  ++ +LT+L +L  R N ++ LP  +  LINL
Sbjct: 211 SEIPDVV-YKLTNLTTLFLRFNRVRYVSDNIRNLTNLTMLSLRENKIRELPAGIGKLINL 269

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
              ++S N  +LE LP  IG  + L  LD+ +N++  +PD+IG L  L +L L  N L +
Sbjct: 270 ITFDVSHN--HLEHLPEEIGNCVQLSTLDLQHNELLDIPDTIGNLISLTRLGLRYNRLTN 327

Query: 190 PP 191
            P
Sbjct: 328 IP 329



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 110/206 (53%), Gaps = 27/206 (13%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           +N+V L++ +NQL  +P+ I CL  L+VL +S NLL+ +P +I N R L  L+   NK+ 
Sbjct: 431 INMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASIANLRKLRVLDLEENKIE 490

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ IGF L +L+ L +  N++  LP+++ HLT+L  L    N L  LPE++  L NL+
Sbjct: 491 SLPNEIGF-LRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYLPEEIGTLENLD 549

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L ++ N   L  LP+ + L  +L               SI        +S+E  PL   
Sbjct: 550 SLYVNDNAN-LHNLPFELALCTNL---------------SI--------MSIENCPLSQI 585

Query: 191 PMDVVEQGLSAVKGYLSEKMNNDHKS 216
           P ++V  G S V  +L  KM   ++S
Sbjct: 586 PPEIVAGGPSLVIQFL--KMQGPYRS 609



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 104/196 (53%), Gaps = 5/196 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +    + +  LD+  N+L  +P++IG L  L  L +  N L ++PK++ NC+ ++E
Sbjct: 282 LPEEI-GNCVQLSTLDLQHNELLDIPDTIGNLISLTRLGLRYNRLTNIPKSLANCKLMDE 340

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ-SLTHLTSLRVLDARLNCLKSLP 120
            +   N++ QLPD +   L +L T++++ N     P       T++  ++   N +  +P
Sbjct: 341 FSVEGNQVSQLPDGLLASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIP 400

Query: 121 EDL-ENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
             +     NL  LN+ +N   L  LP  IG  +++VEL++  N++T +PD I CL+ L+ 
Sbjct: 401 YGIFSRAKNLAKLNMKEN--QLTALPLDIGTWINMVELNLGTNQLTKIPDDIQCLQNLEV 458

Query: 180 LSLEGNPLVSPPMDVV 195
           L L  N L   P  + 
Sbjct: 459 LILSNNLLKRIPASIA 474



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 93/179 (51%), Gaps = 26/179 (14%)

Query: 36  LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           L+ LD+S + +  LP T+ +   L E     NKL  LP  IG  L NL+TL+++ N +  
Sbjct: 131 LERLDLSKSNITHLPSTVRDLTHLVEFYLYGNKLVTLPPEIGC-LGNLETLALSENSLTS 189

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLP-----------------------EDLENLINLEVL 132
           LP +L +L SLRVLD R N L  +P                       +++ NL NL +L
Sbjct: 190 LPNTLENLKSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFNRVRYVSDNIRNLTNLTML 249

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           ++ +N   +  LP  IG L++L+  DVS+N +  LP+ IG   +L  L L+ N L+  P
Sbjct: 250 SLREN--KIRELPAGIGKLINLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIP 306



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 101/195 (51%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNS-IGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +P+ L A L ++  + +  N     P+      + +  +++  N ++ +P  I    ++L
Sbjct: 351 LPDGLLASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNL 410

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP  IG   IN+  L++  N++  +P  +  L +L VL    N LK +
Sbjct: 411 AKLNMKENQLTALPLDIG-TWINMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRI 469

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  + NL  L VL++ +N   +E+LP  IG L  L +L +  N++T+LP +IG L  L  
Sbjct: 470 PASIANLRKLRVLDLEEN--KIESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTY 527

Query: 180 LSLEGNPLVSPPMDV 194
           LS+  N L   P ++
Sbjct: 528 LSVGENNLNYLPEEI 542



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 105/221 (47%), Gaps = 34/221 (15%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L N+  L +  N+++ + ++I  L+ L +L +  N +  LP  I    +L  
Sbjct: 213 IPD-VVYKLTNLTTLFLRFNRVRYVSDNIRNLTNLTMLSLRENKIRELPAGIGKLINLIT 271

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
            + + N L  LP+ IG   + L TL +  N+++ +P ++ +L SL  L  R N L ++P+
Sbjct: 272 FDVSHNHLEHLPEEIG-NCVQLSTLDLQHNELLDIPDTIGNLISLTRLGLRYNRLTNIPK 330

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVEL------------------------ 157
            L N   ++  ++  N   +  LP   GLL SL +L                        
Sbjct: 331 SLANCKLMDEFSVEGN--QVSQLPD--GLLASLSDLTTITLSRNAFTAYPSGGPAQFTNV 386

Query: 158 ---DVSYNKITTLPDSIGCLRK-LQKLSLEGNPLVSPPMDV 194
              ++ +NKI  +P  I    K L KL+++ N L + P+D+
Sbjct: 387 YSINLEHNKIDKIPYGIFSRAKNLAKLNMKENQLTALPLDI 427


>gi|418680694|ref|ZP_13241938.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|400327638|gb|EJO79883.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
          Length = 351

 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 131/227 (57%), Gaps = 11/227 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L N+  L++  NQ+K +P  I  L KL+ L +  N L +LP+ I   ++L+ 
Sbjct: 127 LPQEI-GQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQS 185

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L  LP  IG  L NL+ L +  N++ ILP  +  L +L+ L+ R N L +L +
Sbjct: 186 LDLSTNRLTTLPQEIGH-LQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSK 244

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++E L NL+ L++  N   L T P  IG L +L  LD+  N++TTLP+ IG L+ LQ L 
Sbjct: 245 EIEQLQNLKSLDLRSN--QLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLD 302

Query: 182 LEGNPLVSPPMDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
           L+ N L + P ++ + Q L  +       +NN+  S ++K  + KL+
Sbjct: 303 LDSNQLTTLPQEIGQLQNLQEL------FLNNNQLSSQEKKRIRKLL 343



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L+++ NQL  LP  IG L  L+ L++S N ++++PK IE  + L+ L    N
Sbjct: 40  GKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNN 99

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L  L+ L +  N++  LPQ +  L +L+ L+   N +K++P+ +E L 
Sbjct: 100 QLTTLPQEIG-QLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQ 158

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L +  N   L TLP  IG L +L  LD+S N++TTLP  IG L+ LQ L L  N L
Sbjct: 159 KLQSLGLDNN--QLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQL 216

Query: 188 VSPPMDV 194
              P ++
Sbjct: 217 TILPNEI 223



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/268 (32%), Positives = 137/268 (51%), Gaps = 26/268 (9%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V  LD+ +N+ K LP  IG L  L+ L+++ N L  LPK I   ++L +LN + N+++
Sbjct: 20  LKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIK 79

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            +P  I  +L  L++L +  N++  LPQ +  L  L+ L    N L +LP+++  L NL+
Sbjct: 80  TIPKEIE-KLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLK 138

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+S  +  ++T+P  I  L  L  L +  N++TTLP  IG L+ LQ L L  N L + 
Sbjct: 139 SLNLS--YNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTL 196

Query: 191 PMDVVE----QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGALRNHR----SE 242
           P ++      Q L  V   L+   N           +G+L    T N  LRN+R    S+
Sbjct: 197 PQEIGHLQNLQDLYLVSNQLTILPNE----------IGQLKNLQTLN--LRNNRLTTLSK 244

Query: 243 ERERF--IMS-DFRAIDGLASPRHIGMF 267
           E E+   + S D R+      P+ IG  
Sbjct: 245 EIEQLQNLKSLDLRSNQLTTFPKEIGQL 272



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R LD   N  K+LP+++  L NL+ LN+++N   L  LP  IG L +L 
Sbjct: 12  LTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKN--QLTILPKEIGQLKNLR 69

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +L++S N+I T+P  I  L+KLQ L L  N L + P ++
Sbjct: 70  KLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEI 108


>gi|418727611|ref|ZP_13286199.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409958969|gb|EKO22746.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 379

 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 131/227 (57%), Gaps = 11/227 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L N+  L++  NQ+K +P  I  L KL+ L +  N L +LP+ I   ++L+ 
Sbjct: 155 LPQEI-GQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQS 213

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L  LP  IG  L NL+ L +  N++ ILP  +  L +L+ L+ R N L +L +
Sbjct: 214 LDLSTNRLTTLPQEIGH-LQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSK 272

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++E L NL+ L++  N   L T P  IG L +L  LD+  N++TTLP+ IG L+ LQ L 
Sbjct: 273 EIEQLQNLKSLDLGSN--QLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLD 330

Query: 182 LEGNPLVSPPMDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
           L+ N L + P ++ + Q L  +       +NN+  S ++K  + KL+
Sbjct: 331 LDSNQLTTLPQEIGQLQNLQEL------FLNNNQLSSQEKKRIRKLL 371



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L+++ NQL  LP  IG L  L+ L++S N ++++PK IE  + L+ L    N
Sbjct: 68  GKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L  L+ L +  N++  LPQ +  L +L+ L+   N +K++P+ +E L 
Sbjct: 128 QLTTLPQEIG-QLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQ 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L +  N   L TLP  IG L +L  LD+S N++TTLP  IG L+ LQ L L  N L
Sbjct: 187 KLQSLGLDNN--QLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQL 244

Query: 188 VSPPMDV 194
              P ++
Sbjct: 245 TILPNEI 251



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 88/271 (32%), Positives = 140/271 (51%), Gaps = 32/271 (11%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V  LD+ +N+ K LP  IG L  L+ L+++ N L  LPK I   ++L +LN + N+++
Sbjct: 48  LKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIK 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            +P  I  +L  L++L +  N++  LPQ +  L  L+ L    N L +LP+++  L NL+
Sbjct: 108 TIPKEIE-KLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLK 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+S  +  ++T+P  I  L  L  L +  N++TTLP  IG L+ LQ L L  N L + 
Sbjct: 167 SLNLS--YNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTL 224

Query: 191 PMDVVE----QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGALRNHR----SE 242
           P ++      Q L  V   L+   N           +G+L    T N  LRN+R    S+
Sbjct: 225 PQEIGHLQNLQDLYLVSNQLTILPNE----------IGQLKNLQTLN--LRNNRLTTLSK 272

Query: 243 ERERFIMSDFRAIDGLAS------PRHIGMF 267
           E E+  + + +++D L S      P+ IG  
Sbjct: 273 EIEQ--LQNLKSLD-LGSNQLTTFPKEIGQL 300



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R LD   N  K+LP+++  L NL+ LN+++N   L  LP  IG L +L 
Sbjct: 40  LAKTLQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKN--QLTILPKEIGQLKNLR 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +L++S N+I T+P  I  L+KLQ L L  N L + P ++
Sbjct: 98  KLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEI 136


>gi|421127222|ref|ZP_15587446.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421136033|ref|ZP_15596144.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019767|gb|EKO86581.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410435312|gb|EKP84444.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 427

 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/243 (37%), Positives = 137/243 (56%), Gaps = 15/243 (6%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  +  L +  NQ+K LP  I  L KL+ L +  N L +LP+ IE  + LE L  + N
Sbjct: 185 GKLQKLQWLYLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNN 244

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NLK L +N N++  +PQ + HL +L+ L    N L ++P+++  L 
Sbjct: 245 QLTTLPQEIG-QLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQ 303

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L++  N   L  LP  IG L +L EL +S N++TT+P  IG L+ LQ+L L  N L
Sbjct: 304 NLQMLDLGNN--QLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQL 361

Query: 188 VSPPMDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGALRNHRS--EER 244
            + P ++ + Q L  +  YLS   NN   +  K+  +G+L    T    LRN++   EE+
Sbjct: 362 TTIPKEIGQLQNLQEL--YLS---NNQLITIPKE--IGQLQNLQTL--YLRNNQFSIEEK 412

Query: 245 ERF 247
           ER 
Sbjct: 413 ERI 415



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 107/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +LD+  NQL  LP  I  L  L++LD+  N L  LPK I   ++L+ L+   N
Sbjct: 47  GQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLIILPKEIRQLKNLQMLDLRSN 106

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L ++ N++   P+ +  L  L+ L+   N +K++P+++E L 
Sbjct: 107 QLTILPKEIG-KLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQ 165

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L +  N   L TLP  IG L  L  L +SYN+I TLP  I  L+KLQ L L  N L
Sbjct: 166 KLQSLYLPNN--QLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQKLQWLYLHKNQL 223

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 224 TTLPQEI 230



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 107/186 (57%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ +LD+ SNQL  LP  I  L  L++LD+  N L  LPK I   ++L+EL  + N+
Sbjct: 71  QLKNLQMLDLRSNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQ 130

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L   P  IG +L  L+ L+++ N+I  +P+ +  L  L+ L    N L +LP+++  L  
Sbjct: 131 LTTFPKEIG-KLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQK 189

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S  +  ++TLP  I  L  L  L +  N++TTLP  I  L+KL+ L L+ N L 
Sbjct: 190 LQWLYLS--YNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLT 247

Query: 189 SPPMDV 194
           + P ++
Sbjct: 248 TLPQEI 253



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 79/136 (58%), Gaps = 2/136 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +   L N+  L + SNQL  +P  IG L  L++LD+  N L  LPK I   ++L+E
Sbjct: 272 IPQEI-GHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQE 330

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+L  +P  IG +L NL+ L ++ N++  +P+ +  L +L+ L    N L ++P+
Sbjct: 331 LYLSNNQLTTIPKEIG-QLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPK 389

Query: 122 DLENLINLEVLNISQN 137
           ++  L NL+ L +  N
Sbjct: 390 EIGQLQNLQTLYLRNN 405



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 73/140 (52%), Gaps = 12/140 (8%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVLD     LK+LP+ +  L NL++L++S N   L  LP  I  L +L 
Sbjct: 19  LTKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDN--QLIILPKEIRQLKNLQ 76

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGLSAVKGYLSEKMNNDH 214
            LD+  N++  LP  I  L+ LQ L L  N L   P ++ + Q L  +  YLS   NN  
Sbjct: 77  MLDLRSNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQEL--YLS---NNQL 131

Query: 215 KS-PKKKSWVGKLVKYGTFN 233
            + PK+   +GKL K    N
Sbjct: 132 TTFPKE---IGKLQKLQWLN 148


>gi|327284538|ref|XP_003226994.1| PREDICTED: leucine-rich repeat-containing protein 30-like [Anolis
           carolinensis]
          Length = 298

 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 120/206 (58%), Gaps = 12/206 (5%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +VVL++  N++K LP  IG L  LK+L V+ N L  LP  I +C+ LE L+ + N++  L
Sbjct: 92  LVVLNLCGNRMKSLPKEIGLLRNLKILFVNMNCLTELPAEIGHCKKLEVLSLSHNRISHL 151

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P +I  ELINL+ L+++ N+ + +P S+  L +L  L    N L+++ + ++ L+NL++ 
Sbjct: 152 PPSIT-ELINLRKLNLSNNRFIYIPLSVFALRNLDFLHVGCNKLENIGDSIQFLVNLQIF 210

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS---------LE 183
               ++  +  LP SI  + +L  L+V YN I TLPD +  LR+L +++         + 
Sbjct: 211 --IADYNNIRALPRSICSVAALELLNVDYNCIQTLPDELYLLRRLPQIAWNPMDKGFHIS 268

Query: 184 GNPLVSPPMDVVEQGLSAVKGYLSEK 209
            NPL  P   ++E GL A+  YL +K
Sbjct: 269 HNPLSKPLPQIIEGGLDALYSYLKDK 294


>gi|455791548|gb|EMF43355.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 371

 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/219 (38%), Positives = 125/219 (57%), Gaps = 8/219 (3%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VLD+   +LK LP  IG L  L+ L++  N L ++ K IE  ++L+ELN + N+L 
Sbjct: 48  LDVRVLDLSEQKLKALPKKIGQLKNLQELNLDANQLTTILKEIEQLKNLQELNLDANQLT 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            +   I  +L NL+ L    N+I  L Q +  L +L+VL    N L +LP+++  L NL+
Sbjct: 108 TILKEIE-QLKNLQVLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+  N   L TLP  I  L +L EL +S N++ TLP  IG L KLQ+L+L  N L++ 
Sbjct: 167 TLNLWNN--QLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQELNLWNNQLITL 224

Query: 191 PMDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVK 228
           P ++ + + L  +  YLSE  N     PK+   + KL K
Sbjct: 225 PKEIAQLKNLQEL--YLSE--NQLMTLPKEIGQLEKLQK 259



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 95/272 (34%), Positives = 144/272 (52%), Gaps = 17/272 (6%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ VLD  SNQ+  L   IG L  LKVL ++ N L +LPK I   ++L+ LN   N+
Sbjct: 115 QLKNLQVLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQ 174

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  I  +L NL+ L ++ N+++ LP+ +  L  L+ L+   N L +LP+++  L N
Sbjct: 175 LITLPKEIA-QLKNLQELYLSENQLMTLPKEIGQLEKLQELNLWNNQLITLPKEIAQLKN 233

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S+N   L TLP  IG L  L +L ++ N++TT+P+ I  L+ LQ L L  N   
Sbjct: 234 LQELYLSEN--QLMTLPKEIGQLEKLQKLYLNANQLTTIPNEIAQLQNLQVLFLSYNQFK 291

Query: 189 SPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGALRNHR-SEERERF 247
           + P   VE G       L+   N     PK+   +G+L    T    LRN++ S E ++ 
Sbjct: 292 TIP---VEFGQLKNLQELNLDANQLTTIPKE---IGQLQNLQTL--YLRNNQFSIEEKKG 343

Query: 248 IMSDFRAIDGLASPRHIGMFSPRRLFSPRSYF 279
             S F+     ++   +   S   LFSP S F
Sbjct: 344 FESFFQ-----SAKFTLNKISFSELFSPYSLF 370



 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL +++NQL  LP  IG L  L+ L++  N L +LPK I   ++L+EL  + N
Sbjct: 137 GQLQNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSEN 196

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L  L+ L++  N+++ LP+ +  L +L+ L    N L +LP+++  L 
Sbjct: 197 QLMTLPKEIG-QLEKLQELNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLE 255

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L ++ N   L T+P  I  L +L  L +SYN+  T+P   G L+ LQ+L+L+ N L
Sbjct: 256 KLQKLYLNAN--QLTTIPNEIAQLQNLQVLFLSYNQFKTIPVEFGQLKNLQELNLDANQL 313

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 314 TTIPKEI 320



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 109/188 (57%), Gaps = 3/188 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L++ +NQL  +   I  L  L+VLD   N + +L + I   ++L+ L  N N+
Sbjct: 92  QLKNLQELNLDANQLTTILKEIEQLKNLQVLDFGSNQITTLSQEIGQLQNLKVLFLNNNQ 151

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG +L NL+TL++  N+++ LP+ +  L +L+ L    N L +LP+++  L  
Sbjct: 152 LTTLPKEIG-QLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEK 210

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ LN+  N   L TLP  I  L +L EL +S N++ TLP  IG L KLQKL L  N L 
Sbjct: 211 LQELNLWNN--QLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQKLYLNANQLT 268

Query: 189 SPPMDVVE 196
           + P ++ +
Sbjct: 269 TIPNEIAQ 276



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 90/178 (50%), Gaps = 26/178 (14%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A+L N+  L +  NQL  LP  IG L KL+ L++  N L +LPK I   ++L+EL  + N
Sbjct: 183 AQLKNLQELYLSENQLMTLPKEIGQLEKLQELNLWNNQLITLPKEIAQLKNLQELYLSEN 242

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L  L+ L +N N++  +P  +  L +L+VL    N  K          
Sbjct: 243 QLMTLPKEIG-QLEKLQKLYLNANQLTTIPNEIAQLQNLQVLFLSYNQFK---------- 291

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
                          T+P   G L +L EL++  N++TT+P  IG L+ LQ L L  N
Sbjct: 292 ---------------TIPVEFGQLKNLQELNLDANQLTTIPKEIGQLQNLQTLYLRNN 334



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 49/186 (26%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS-------------------- 135
           L ++L +   +RVLD     LK+LP+ +  L NL+ LN+                     
Sbjct: 40  LTKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQELNLDANQLTTILKEIEQLKNLQEL 99

Query: 136 -----------------QNFQYLE-------TLPYSIGLLMSLVELDVSYNKITTLPDSI 171
                            +N Q L+       TL   IG L +L  L ++ N++TTLP  I
Sbjct: 100 NLDANQLTTILKEIEQLKNLQVLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPKEI 159

Query: 172 GCLRKLQKLSLEGNPLVSPPMDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYG 230
           G L+ LQ L+L  N L++ P ++ + + L  +  YLSE  N     PK+   + KL +  
Sbjct: 160 GQLKNLQTLNLWNNQLITLPKEIAQLKNLQEL--YLSE--NQLMTLPKEIGQLEKLQELN 215

Query: 231 TFNGAL 236
            +N  L
Sbjct: 216 LWNNQL 221


>gi|418755319|ref|ZP_13311526.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964330|gb|EKO32220.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 492

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 110/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+ SNQL  LP  IG L  L+ L+++ N L +LP+ I   ++L+EL+   N
Sbjct: 132 GKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQELHLTDN 191

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L +N N++  LP+ +  L  L  L    N L +LP+++  L 
Sbjct: 192 QLTTLPKEIE-KLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKEIGKLQ 250

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +S N   L TLP  IG L  L EL +  N++TTLP  IG L+ LQ+L L+ N L
Sbjct: 251 NLQWLGLSNN--QLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDYNRL 308

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 309 TTLPEEI 315



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/172 (40%), Positives = 103/172 (59%), Gaps = 3/172 (1%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELIN 82
           L  LP  IG L  L+ LD+S N L +LPK I   ++L++LN   N+L  LP+ IG +L N
Sbjct: 124 LWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIG-KLQN 182

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           L+ L +  N++  LP+ +  L +L+ L    N L +LP+++  L  LE L++  N   L 
Sbjct: 183 LQELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENN--QLT 240

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           TLP  IG L +L  L +S N++TTLP  IG L+ LQ+L LE N L + P ++
Sbjct: 241 TLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEI 292



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 112/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + +NQL  LP  IG L  L+ L +  N L +LPK I   ++L+EL  ++N
Sbjct: 247 GKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDYN 306

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ I  +L  LK L  + N+   +P+ + +L +L+ L+   N L SLP+++ NL 
Sbjct: 307 RLTTLPEEIE-KLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQ 365

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L +S N   L TLP  IG L +L  L +S N++TTLP  IG L+ LQ+L L  N L
Sbjct: 366 NLQLLYLSDN--QLATLPKEIGKLQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLSDNQL 423

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 424 ATLPKEI 430



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/153 (37%), Positives = 90/153 (58%), Gaps = 3/153 (1%)

Query: 42  SGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLT 101
           S + L +LPK I   ++L +L+ + N+L  LP  IG +L NL+ L++  N++  LP+ + 
Sbjct: 120 SNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIG-KLQNLQKLNLTRNRLANLPEEIG 178

Query: 102 HLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSY 161
            L +L+ L    N L +LP+++E L NL+ L ++ N   L TLP  IG L  L  L +  
Sbjct: 179 KLQNLQELHLTDNQLTTLPKEIEKLQNLQWLGLNNN--QLTTLPKEIGKLQKLEALHLEN 236

Query: 162 NKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           N++TTLP  IG L+ LQ L L  N L + P ++
Sbjct: 237 NQLTTLPKEIGKLQNLQWLGLSNNQLTTLPKEI 269



 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 79/134 (58%), Gaps = 2/134 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +   L N+  L+++SNQL  LP  IG L  L++L +S N L +LPK I   ++L+ 
Sbjct: 334 VPEEI-WNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQL 392

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+L  LP  IG +L NL+ L ++ N++  LP+ + +L SL  L    N L S PE
Sbjct: 393 LYLSDNQLTTLPKEIG-KLQNLQELYLSDNQLATLPKEIENLQSLEYLYLSDNPLTSFPE 451

Query: 122 DLENLINLEVLNIS 135
           ++  L +L+ L + 
Sbjct: 452 EIGKLQHLKWLRLE 465



 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 53/91 (58%), Gaps = 2/91 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L +  NQL  LP  IG L  L+ L +S N L +LPK IEN +SLE L  + N
Sbjct: 385 GKLQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLSDNQLATLPKEIENLQSLEYLYLSDN 444

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQ 98
            L   P+ IG +L +LK L +  N   +LPQ
Sbjct: 445 PLTSFPEEIG-KLQHLKWLRLE-NIPTLLPQ 473


>gi|359727310|ref|ZP_09266006.1| hypothetical protein Lwei2_10290 [Leptospira weilii str.
           2006001855]
          Length = 307

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/183 (38%), Positives = 114/183 (62%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V VL++  ++L  LP  IG L  L++L +SGN  ++LPK I   ++L++L+ + N+L  
Sbjct: 49  DVRVLNLSGDRLTTLPKEIGKLRNLQILYLSGNQFKALPKEIGQLQNLQKLDLSGNELAI 108

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ IG +L  L+ L ++ N++  LP+ +  + +L+ LD   N L +LP+++  L  L+V
Sbjct: 109 LPEEIG-QLKKLQELFLDGNQLETLPKEIEKIQNLQKLDLSGNQLTNLPKEIGKLHKLQV 167

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L ++ N   L+TLP  IG L  L +LD+S N++ TLP  IG L+KLQKL L  N L   P
Sbjct: 168 LELNSN--QLKTLPKEIGQLQKLPDLDLSGNQLETLPKEIGQLQKLQKLDLAENQLAVLP 225

Query: 192 MDV 194
             +
Sbjct: 226 KGI 228



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 112/187 (59%), Gaps = 6/187 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  N+L  LP  IG L KL+ L + GN LE+LPK IE  ++L++L+ + N
Sbjct: 91  GQLQNLQKLDLSGNELAILPEEIGQLKKLQELFLDGNQLETLPKEIEKIQNLQKLDLSGN 150

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L  L+ L +N N++  LP+ +  L  L  LD   N L++LP+++  L 
Sbjct: 151 QLTNLPKEIG-KLHKLQVLELNSNQLKTLPKEIGQLQKLPDLDLSGNQLETLPKEIGQLQ 209

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L++++N   L  LP  I     L ELD+S N++T L   IG L+ L+ L+L+ N L
Sbjct: 210 KLQKLDLAEN--QLAVLPKGIE---KLKELDLSSNQLTNLSQEIGKLKNLRILNLDYNRL 264

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 265 TTLPKEI 271



 Score =  100 bits (249), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 108/187 (57%), Gaps = 6/187 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L +  NQ K LP  IG L  L+ LD+SGN L  LP+ I   + L+EL  + N
Sbjct: 68  GKLRNLQILYLSGNQFKALPKEIGQLQNLQKLDLSGNELAILPEEIGQLKKLQELFLDGN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  ++ NL+ L ++ N++  LP+ +  L  L+VL+   N LK+LP+++  L 
Sbjct: 128 QLETLPKEIE-KIQNLQKLDLSGNQLTNLPKEIGKLHKLQVLELNSNQLKTLPKEIGQLQ 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L  L++S N   LETLP  IG L  L +LD++ N++  LP  I    KL++L L  N L
Sbjct: 187 KLPDLDLSGN--QLETLPKEIGQLQKLQKLDLAENQLAVLPKGI---EKLKELDLSSNQL 241

Query: 188 VSPPMDV 194
            +   ++
Sbjct: 242 TNLSQEI 248



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/130 (40%), Positives = 78/130 (60%), Gaps = 4/130 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  + VL+++SNQLK LP  IG L KL  LD+SGN LE+LPK I   + L++L+   N
Sbjct: 160 GKLHKLQVLELNSNQLKTLPKEIGQLQKLPDLDLSGNQLETLPKEIGQLQKLQKLDLAEN 219

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I      LK L ++ N++  L Q +  L +LR+L+   N L +LP+++  L 
Sbjct: 220 QLAVLPKGIE----KLKELDLSSNQLTNLSQEIGKLKNLRILNLDYNRLTTLPKEIGKLQ 275

Query: 128 NLEVLNISQN 137
           NL  L + +N
Sbjct: 276 NLRELYLHKN 285


>gi|418755315|ref|ZP_13311522.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964326|gb|EKO32216.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 511

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 110/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++H+N+LK LP  IG L KL+ L + GN L +LP+ I   + LEEL+ + +
Sbjct: 127 GQLENLQALNLHNNRLKSLPKEIGKLQKLERLYLGGNQLRTLPQEIGTLQDLEELHLSRD 186

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+  P+ IG +L +LK L ++ N++V+L Q +  L SL  L    N L +LP ++  L 
Sbjct: 187 QLKTFPEEIG-KLRSLKRLILDSNQLVVLSQEIGKLRSLERLILENNQLATLPNEIGKLQ 245

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NLE LN+S N   L TLP  IG L +L  L +  N+  TLP  I  L+ LQ L L  N L
Sbjct: 246 NLEELNLSNN--QLVTLPQEIGALENLQNLHLYSNQFRTLPKQIWQLQNLQDLHLAHNQL 303

Query: 188 VSPPMDV 194
              P ++
Sbjct: 304 TVLPQEI 310



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 105/187 (56%), Gaps = 3/187 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L +  NQL  LP  IG L  L+ L ++ N L+SLPK I   + L+ L    N+
Sbjct: 289 QLQNLQDLHLAHNQLTVLPQEIGQLENLQSLILARNQLKSLPKEIGKLQKLKWLILANNQ 348

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG +L  L+ L +  N++  LP+ +  L  L+ LD   N L+ LPE++  L  
Sbjct: 349 LTVLPQEIG-QLEKLEDLYLEDNQLTTLPKEIWKLEKLKYLDLANNQLRLLPEEIGKLQK 407

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           LE L++S N   L  LP  IG L  L  LD+S N++ TLP  IG L KL+ L L GNP  
Sbjct: 408 LEYLDLSNN--QLRLLPQKIGKLEKLKYLDLSNNQLATLPKEIGKLEKLEDLDLSGNPFT 465

Query: 189 SPPMDVV 195
           + P ++V
Sbjct: 466 TFPKEIV 472



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/185 (37%), Positives = 111/185 (60%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+  L++ +NQL  LPN IG L  L+VL +  N L +LP+ +   ++L ELN   N+L
Sbjct: 60  LQNLRELNLENNQLATLPNEIGQLENLQVLSLYNNRLRTLPQEVGTLQNLRELNLENNQL 119

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP+ IG +L NL+ L+++ N++  LP+ +  L  L  L    N L++LP+++  L +L
Sbjct: 120 ATLPNGIG-QLENLQALNLHNNRLKSLPKEIGKLQKLERLYLGGNQLRTLPQEIGTLQDL 178

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           E L++S++   L+T P  IG L SL  L +  N++  L   IG LR L++L LE N L +
Sbjct: 179 EELHLSRD--QLKTFPEEIGKLRSLKRLILDSNQLVVLSQEIGKLRSLERLILENNQLAT 236

Query: 190 PPMDV 194
            P ++
Sbjct: 237 LPNEI 241



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 103/178 (57%), Gaps = 3/178 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           ++V  L ++ +QL+ L   +G L  L+ L++  N L +LP  I    +L+ L+   N+LR
Sbjct: 38  MDVKSLHLNRDQLRTLSQEVGTLQNLRELNLENNQLATLPNEIGQLENLQVLSLYNNRLR 97

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  +G  L NL+ L++  N++  LP  +  L +L+ L+   N LKSLP+++  L  LE
Sbjct: 98  TLPQEVGT-LQNLRELNLENNQLATLPNGIGQLENLQALNLHNNRLKSLPKEIGKLQKLE 156

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
            L +  N   L TLP  IG L  L EL +S +++ T P+ IG LR L++L L+ N LV
Sbjct: 157 RLYLGGN--QLRTLPQEIGTLQDLEELHLSRDQLKTFPEEIGKLRSLKRLILDSNQLV 212



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 107/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL +++N+L+ LP  +G L  L+ L++  N L +LP  I    +L+ LN + N
Sbjct: 81  GQLENLQVLSLYNNRLRTLPQEVGTLQNLRELNLENNQLATLPNGIGQLENLQALNLHNN 140

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG +L  L+ L +  N++  LPQ +  L  L  L    + LK+ PE++  L 
Sbjct: 141 RLKSLPKEIG-KLQKLERLYLGGNQLRTLPQEIGTLQDLEELHLSRDQLKTFPEEIGKLR 199

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L +  N   L  L   IG L SL  L +  N++ TLP+ IG L+ L++L+L  N L
Sbjct: 200 SLKRLILDSN--QLVVLSQEIGKLRSLERLILENNQLATLPNEIGKLQNLEELNLSNNQL 257

Query: 188 VSPPMDV 194
           V+ P ++
Sbjct: 258 VTLPQEI 264



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/171 (38%), Positives = 94/171 (54%), Gaps = 4/171 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +  +L N+  L +  NQLK LP  IG L KLK L ++ N L  LP+ I     LE
Sbjct: 305 VLPQEI-GQLENLQSLILARNQLKSLPKEIGKLQKLKWLILANNQLTVLPQEIGQLEKLE 363

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L    N+L  LP  I ++L  LK L +  N++ +LP+ +  L  L  LD   N L+ LP
Sbjct: 364 DLYLEDNQLTTLPKEI-WKLEKLKYLDLANNQLRLLPEEIGKLQKLEYLDLSNNQLRLLP 422

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           + +  L  L+ L++S N   L TLP  IG L  L +LD+S N  TT P  I
Sbjct: 423 QKIGKLEKLKYLDLSNN--QLATLPKEIGKLEKLEDLDLSGNPFTTFPKEI 471



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 70/114 (61%), Gaps = 2/114 (1%)

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
           +++K+L +N +++  L Q +  L +LR L+   N L +LP ++  L NL+VL++  N   
Sbjct: 38  MDVKSLHLNRDQLRTLSQEVGTLQNLRELNLENNQLATLPNEIGQLENLQVLSLYNN--R 95

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L TLP  +G L +L EL++  N++ TLP+ IG L  LQ L+L  N L S P ++
Sbjct: 96  LRTLPQEVGTLQNLRELNLENNQLATLPNGIGQLENLQALNLHNNRLKSLPKEI 149


>gi|340712839|ref|XP_003394961.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Bombus
           terrestris]
          Length = 610

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/182 (38%), Positives = 109/182 (59%), Gaps = 3/182 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L ++V   ++ N+L  LP  IGCL  L+ L +S N L SLP T+EN +SL  L+   NKL
Sbjct: 151 LTHLVEFYLYGNKLVTLPPEIGCLGNLETLALSENSLTSLPNTLENLKSLRVLDLRHNKL 210

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++PD + ++L NL TL +  N++  +  ++ +LT+L +L  R N ++ LP  +  L+NL
Sbjct: 211 SEIPDVV-YKLTNLTTLFLRFNRVRYVSDNIRNLTNLTMLSLRENKIRELPAGIGKLVNL 269

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
              ++S N  +LE LP  IG  + L  LD+ +N++  +PD+IG L  L +L L  N L S
Sbjct: 270 ITFDVSHN--HLEHLPEEIGNCVQLSTLDLQHNELLDIPDTIGRLVLLTRLGLRYNRLTS 327

Query: 190 PP 191
            P
Sbjct: 328 IP 329



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 110/206 (53%), Gaps = 27/206 (13%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           +N+V L++ +NQL  +P+ I CL  L+VL +S NLL+ +P +I N R L  L+   NK+ 
Sbjct: 431 VNMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASIANLRKLRVLDLEENKIE 490

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ IGF L +L+ L +  N++  LP+++ HLT+L  L    N L  LPE++  L NL+
Sbjct: 491 SLPNEIGF-LRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYLPEEIGTLENLD 549

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L ++ N   L  LP+ + L  +L               SI        +S+E  PL   
Sbjct: 550 SLYVNDNAN-LHNLPFELALCTNL---------------SI--------MSIENCPLSQI 585

Query: 191 PMDVVEQGLSAVKGYLSEKMNNDHKS 216
           P ++V  G S V  +L  KM   ++S
Sbjct: 586 PPEIVAGGPSLVIQFL--KMQGPYRS 609



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 104/196 (53%), Gaps = 5/196 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +    + +  LD+  N+L  +P++IG L  L  L +  N L S+PK++ NC+ ++E
Sbjct: 282 LPEEI-GNCVQLSTLDLQHNELLDIPDTIGRLVLLTRLGLRYNRLTSIPKSLANCKLMDE 340

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ-SLTHLTSLRVLDARLNCLKSLP 120
            +   N++ QLPD +   L +L T++++ N     P       T++  ++   N +  +P
Sbjct: 341 FSVEGNQVSQLPDGLLASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIP 400

Query: 121 EDL-ENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
             +     NL  LN+ +N   L  LP  IG  +++VEL++  N++T +PD I CL+ L+ 
Sbjct: 401 YGIFSRAKNLAKLNMKEN--QLTALPLDIGTWVNMVELNLGTNQLTKIPDDIQCLQNLEV 458

Query: 180 LSLEGNPLVSPPMDVV 195
           L L  N L   P  + 
Sbjct: 459 LILSNNLLKRIPASIA 474



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 93/179 (51%), Gaps = 26/179 (14%)

Query: 36  LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           L+ LD+S + +  LP T+ +   L E     NKL  LP  IG  L NL+TL+++ N +  
Sbjct: 131 LERLDLSKSNITHLPSTVRDLTHLVEFYLYGNKLVTLPPEIGC-LGNLETLALSENSLTS 189

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLP-----------------------EDLENLINLEVL 132
           LP +L +L SLRVLD R N L  +P                       +++ NL NL +L
Sbjct: 190 LPNTLENLKSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFNRVRYVSDNIRNLTNLTML 249

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           ++ +N   +  LP  IG L++L+  DVS+N +  LP+ IG   +L  L L+ N L+  P
Sbjct: 250 SLREN--KIRELPAGIGKLVNLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIP 306



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 101/195 (51%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNS-IGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +P+ L A L ++  + +  N     P+      + +  +++  N ++ +P  I    ++L
Sbjct: 351 LPDGLLASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNL 410

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP  IG   +N+  L++  N++  +P  +  L +L VL    N LK +
Sbjct: 411 AKLNMKENQLTALPLDIG-TWVNMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRI 469

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  + NL  L VL++ +N   +E+LP  IG L  L +L +  N++T+LP +IG L  L  
Sbjct: 470 PASIANLRKLRVLDLEEN--KIESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTY 527

Query: 180 LSLEGNPLVSPPMDV 194
           LS+  N L   P ++
Sbjct: 528 LSVGENNLNYLPEEI 542



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 34/221 (15%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L N+  L +  N+++ + ++I  L+ L +L +  N +  LP  I    +L  
Sbjct: 213 IPD-VVYKLTNLTTLFLRFNRVRYVSDNIRNLTNLTMLSLRENKIRELPAGIGKLVNLIT 271

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
            + + N L  LP+ IG   + L TL +  N+++ +P ++  L  L  L  R N L S+P+
Sbjct: 272 FDVSHNHLEHLPEEIG-NCVQLSTLDLQHNELLDIPDTIGRLVLLTRLGLRYNRLTSIPK 330

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVEL------------------------ 157
            L N   ++  ++  N   +  LP   GLL SL +L                        
Sbjct: 331 SLANCKLMDEFSVEGN--QVSQLPD--GLLASLSDLTTITLSRNAFTAYPSGGPAQFTNV 386

Query: 158 ---DVSYNKITTLPDSIGCLRK-LQKLSLEGNPLVSPPMDV 194
              ++ +NKI  +P  I    K L KL+++ N L + P+D+
Sbjct: 387 YSINLEHNKIDKIPYGIFSRAKNLAKLNMKENQLTALPLDI 427


>gi|307178161|gb|EFN66969.1| Leucine-rich repeat protein SHOC-2 [Camponotus floridanus]
          Length = 624

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/174 (38%), Positives = 106/174 (60%), Gaps = 3/174 (1%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           ++ N+L  LP  IGCL+ L+ L +S N L SLP T+EN +SL  L+   NKL ++PD + 
Sbjct: 173 IYGNKLATLPPEIGCLANLETLALSENSLTSLPNTLENLKSLRVLDLRHNKLNEIPDVV- 231

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
           ++L +L TL +  N++  +  ++ +LT+L +L  R N +K LP  +  L+NL   ++S N
Sbjct: 232 YKLTSLTTLFLRFNRVKYVNDNIRYLTNLTMLSLRENKIKELPAGVGELVNLITFDVSHN 291

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
             +LE LP  IG  + L  LD+ +N++  +PD+IG L  L +L L  N L + P
Sbjct: 292 --HLEHLPEEIGNCVQLSTLDLQHNELLDIPDTIGNLVSLTRLGLRYNRLSNIP 343



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 98/182 (53%), Gaps = 3/182 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+  L +  N L  LPN++  L  L+VLD+  N L  +P  +    SL  L   FN++
Sbjct: 188 LANLETLALSENSLTSLPNTLENLKSLRVLDLRHNKLNEIPDVVYKLTSLTTLFLRFNRV 247

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           + + D I + L NL  LS+  NKI  LP  +  L +L   D   N L+ LPE++ N + L
Sbjct: 248 KYVNDNIRY-LTNLTMLSLRENKIKELPAGVGELVNLITFDVSHNHLEHLPEEIGNCVQL 306

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
             L++  N   L  +P +IG L+SL  L + YN+++ +P S+   + + + S+EGN +  
Sbjct: 307 STLDLQHN--ELLDIPDTIGNLVSLTRLGLRYNRLSNIPKSLANCKMMDEFSVEGNQVSH 364

Query: 190 PP 191
            P
Sbjct: 365 LP 366



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 109/206 (52%), Gaps = 27/206 (13%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           +N+V L++ +NQL  +P+ I  L  L++L +S NLL+ +P TI N R L  L+   N++ 
Sbjct: 445 VNMVELNLGTNQLMKIPDDIQYLKSLEILILSNNLLKRIPATIANLRKLRVLDLEENRID 504

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ IGF L  L+ L +  N++V LP+++ HLT+L  L    N L  LPE++  L NLE
Sbjct: 505 SLPNEIGF-LRELQKLILQSNQVVSLPRAIGHLTNLTYLSVGENNLNYLPEEIGTLENLE 563

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L I+ N   L  LP+ + L  +L               SI        +S+E  PL   
Sbjct: 564 SLYINDNAN-LHNLPFELALCTNL---------------SI--------MSIENCPLSQI 599

Query: 191 PMDVVEQGLSAVKGYLSEKMNNDHKS 216
           P ++V  G S V  +L  KM   ++S
Sbjct: 600 PAEIVAGGPSLVIQFL--KMQGPYRS 623



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 111/236 (47%), Gaps = 47/236 (19%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +    + +  LD+  N+L  +P++IG L  L  L +  N L ++PK++ NC+ ++E
Sbjct: 296 LPEEI-GNCVQLSTLDLQHNELLDIPDTIGNLVSLTRLGLRYNRLSNIPKSLANCKMMDE 354

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQS---------------------- 99
            +   N++  LPD +   L +L T++++ N     P                        
Sbjct: 355 FSVEGNQVSHLPDGLLSSLSDLTTITLSRNNFTAYPSGGPSQFTNVYSINLEHNKIDKIP 414

Query: 100 ---LTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN--------FQYLETL---- 144
               +   +L  L+ + N L +LP D+   +N+  LN+  N         QYL++L    
Sbjct: 415 YAIFSRAKNLTKLNMKENQLTALPLDIGTWVNMVELNLGTNQLMKIPDDIQYLKSLEILI 474

Query: 145 ---------PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
                    P +I  L  L  LD+  N+I +LP+ IG LR+LQKL L+ N +VS P
Sbjct: 475 LSNNLLKRIPATIANLRKLRVLDLEENRIDSLPNEIGFLRELQKLILQSNQVVSLP 530



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 97/197 (49%), Gaps = 28/197 (14%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LDV    ++C    +      K LD+S   + +LP ++     L E     NKL  LP  
Sbjct: 131 LDVAKEFVRCREECV------KRLDLSKASITNLPSSVRELTHLREFYIYGNKLATLPPE 184

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL--- 132
           IG  L NL+TL+++ N +  LP +L +L SLRVLD R N L  +P+ +  L +L  L   
Sbjct: 185 IGC-LANLETLALSENSLTSLPNTLENLKSLRVLDLRHNKLNEIPDVVYKLTSLTTLFLR 243

Query: 133 -----NISQNFQYL-------------ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCL 174
                 ++ N +YL             + LP  +G L++L+  DVS+N +  LP+ IG  
Sbjct: 244 FNRVKYVNDNIRYLTNLTMLSLRENKIKELPAGVGELVNLITFDVSHNHLEHLPEEIGNC 303

Query: 175 RKLQKLSLEGNPLVSPP 191
            +L  L L+ N L+  P
Sbjct: 304 VQLSTLDLQHNELLDIP 320



 Score = 77.0 bits (188), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 25/209 (11%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+ +L +  N++K LP  +G L  L   DVS N LE LP+ I NC  L  L+   N+L
Sbjct: 257 LTNLTMLSLRENKIKELPAGVGELVNLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNEL 316

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLIN 128
             +PDTIG  L++L  L +  N++  +P+SL +   +       N +  LP+  L +L +
Sbjct: 317 LDIPDTIG-NLVSLTRLGLRYNRLSNIPKSLANCKMMDEFSVEGNQVSHLPDGLLSSLSD 375

Query: 129 LEVLNISQN----------------------FQYLETLPYSI-GLLMSLVELDVSYNKIT 165
           L  + +S+N                         ++ +PY+I     +L +L++  N++T
Sbjct: 376 LTTITLSRNNFTAYPSGGPSQFTNVYSINLEHNKIDKIPYAIFSRAKNLTKLNMKENQLT 435

Query: 166 TLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LP  IG    + +L+L  N L+  P D+
Sbjct: 436 ALPLDIGTWVNMVELNLGTNQLMKIPDDI 464



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 102/195 (52%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNS-IGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +P+ L + L ++  + +  N     P+      + +  +++  N ++ +P  I    ++L
Sbjct: 365 LPDGLLSSLSDLTTITLSRNNFTAYPSGGPSQFTNVYSINLEHNKIDKIPYAIFSRAKNL 424

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP  IG   +N+  L++  N+++ +P  + +L SL +L    N LK +
Sbjct: 425 TKLNMKENQLTALPLDIG-TWVNMVELNLGTNQLMKIPDDIQYLKSLEILILSNNLLKRI 483

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  + NL  L VL++ +N   +++LP  IG L  L +L +  N++ +LP +IG L  L  
Sbjct: 484 PATIANLRKLRVLDLEEN--RIDSLPNEIGFLRELQKLILQSNQVVSLPRAIGHLTNLTY 541

Query: 180 LSLEGNPLVSPPMDV 194
           LS+  N L   P ++
Sbjct: 542 LSVGENNLNYLPEEI 556



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 107/221 (48%), Gaps = 34/221 (15%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L ++  L +  N++K + ++I  L+ L +L +  N ++ LP  +    +L  
Sbjct: 227 IPD-VVYKLTSLTTLFLRFNRVKYVNDNIRYLTNLTMLSLRENKIKELPAGVGELVNLIT 285

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
            + + N L  LP+ IG   + L TL +  N+++ +P ++ +L SL  L  R N L ++P+
Sbjct: 286 FDVSHNHLEHLPEEIG-NCVQLSTLDLQHNELLDIPDTIGNLVSLTRLGLRYNRLSNIPK 344

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVEL------------------------ 157
            L N   ++  ++  N   +  LP   GLL SL +L                        
Sbjct: 345 SLANCKMMDEFSVEGN--QVSHLPD--GLLSSLSDLTTITLSRNNFTAYPSGGPSQFTNV 400

Query: 158 ---DVSYNKITTLPDSIGCLRK-LQKLSLEGNPLVSPPMDV 194
              ++ +NKI  +P +I    K L KL+++ N L + P+D+
Sbjct: 401 YSINLEHNKIDKIPYAIFSRAKNLTKLNMKENQLTALPLDI 441



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 71/143 (49%), Gaps = 5/143 (3%)

Query: 56  CRS--LEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL 113
           CR   ++ L+ +   +  LP ++  EL +L+   I  NK+  LP  +  L +L  L    
Sbjct: 140 CREECVKRLDLSKASITNLPSSVR-ELTHLREFYIYGNKLATLPPEIGCLANLETLALSE 198

Query: 114 NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGC 173
           N L SLP  LENL +L VL++  N   L  +P  +  L SL  L + +N++  + D+I  
Sbjct: 199 NSLTSLPNTLENLKSLRVLDLRHN--KLNEIPDVVYKLTSLTTLFLRFNRVKYVNDNIRY 256

Query: 174 LRKLQKLSLEGNPLVSPPMDVVE 196
           L  L  LSL  N +   P  V E
Sbjct: 257 LTNLTMLSLRENKIKELPAGVGE 279



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 69/124 (55%), Gaps = 5/124 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP ++ A L  + VLD+  N++  LPN IG L +L+ L +  N + SLP+ I +  +L  
Sbjct: 483 IPATI-ANLRKLRVLDLEENRIDSLPNEIGFLRELQKLILQSNQVVSLPRAIGHLTNLTY 541

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNK-IVILPQSLTHLTSLRVLDARLNC-LKSL 119
           L+   N L  LP+ IG  L NL++L IN N  +  LP  L   T+L ++    NC L  +
Sbjct: 542 LSVGENNLNYLPEEIG-TLENLESLYINDNANLHNLPFELALCTNLSIMSIE-NCPLSQI 599

Query: 120 PEDL 123
           P ++
Sbjct: 600 PAEI 603


>gi|417770611|ref|ZP_12418517.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|409947383|gb|EKN97381.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|455665930|gb|EMF31412.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 377

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 131/227 (57%), Gaps = 11/227 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L N+  L++  NQ+K +P  I  L KL+ L +  N L +LP+ I   ++L+ 
Sbjct: 153 LPQEI-GQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQS 211

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L  LP  IG  L NL+ L +  N++ ILP  +  L +L+ L+ R N L +L +
Sbjct: 212 LDLSTNRLTTLPQEIG-HLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSK 270

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++E L NL+ L++  N   L T P  IG L +L  LD+  N++TTLP+ IG L+ LQ L 
Sbjct: 271 EIEQLQNLKSLDLRSN--QLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLD 328

Query: 182 LEGNPLVSPPMDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
           L+ N L + P ++ + Q L  +       +NN+  S ++K  + KL+
Sbjct: 329 LDSNQLTTLPQEIGQLQNLQEL------FLNNNQLSSQEKKRIRKLL 369



 Score =  107 bits (267), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L+++ NQL  LP  IG L  L+ L++S N ++++PK IE  + L+ L    N
Sbjct: 66  GKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L  L+ L +  N++  LPQ +  L +L+ L+   N +K++P+ +E L 
Sbjct: 126 QLTTLPQEIG-QLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQ 184

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L +  N   L TLP  IG L +L  LD+S N++TTLP  IG L+ LQ L L  N L
Sbjct: 185 KLQSLGLDNN--QLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQL 242

Query: 188 VSPPMDV 194
              P ++
Sbjct: 243 TILPNEI 249



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/268 (31%), Positives = 133/268 (49%), Gaps = 26/268 (9%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V  LD+ +N+ K LP  IG L  L+ L+++ N L  LPK I   ++L +LN + N+++
Sbjct: 46  LKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIK 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            +P  I  +L  L++L +  N++  LPQ +  L  L+ L    N L +LP+++  L NL+
Sbjct: 106 TIPKEIE-KLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLK 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+S  +  ++T+P  I  L  L  L +  N++TTLP  IG L+ LQ L L  N L + 
Sbjct: 165 SLNLS--YNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTL 222

Query: 191 PMDVVE----QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGALRNHR------ 240
           P ++      Q L  V   L+   N           +G+L    T N  LRN+R      
Sbjct: 223 PQEIGHLQNLQDLYLVSNQLTILPNE----------IGQLKNLQTLN--LRNNRLTTLSK 270

Query: 241 -SEERERFIMSDFRAIDGLASPRHIGMF 267
             E+ +     D R+      P+ IG  
Sbjct: 271 EIEQLQNLKSLDLRSNQLTTFPKEIGQL 298



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R LD   N  K+LP+++  L NL+ LN+++N   L  LP  IG L +L 
Sbjct: 38  LTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKN--QLTILPKEIGQLKNLR 95

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +L++S N+I T+P  I  L+KLQ L L  N L + P ++
Sbjct: 96  KLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEI 134


>gi|24216022|ref|NP_713503.1| hypothetical protein LA_3323 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075103|ref|YP_005989422.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24197250|gb|AAN50521.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458894|gb|AER03439.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 311

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/242 (33%), Positives = 131/242 (54%), Gaps = 29/242 (11%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L+++ NQL  LP  IG L  LK L++S N ++++PK IE  + L+ L  + N
Sbjct: 69  GKLKNLQELNLNKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNN 128

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL++L ++ N++  LPQ + HL +L+ L    N L  LP ++  L 
Sbjct: 129 QLTTLPQEIG-QLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLK 187

Query: 128 NLEVLNIS--------------QNFQYLE-------TLPYSIGLLMSLVELDVSYNKITT 166
           NL+ LN+               QN + L+       T P  I  L +L  LD+  N++TT
Sbjct: 188 NLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIEQLKNLQVLDLGSNQLTT 247

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGK 225
           LP+ IG L+ LQ L L+ N L + P ++ + Q L  +       +NN+  S ++K  + K
Sbjct: 248 LPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQEL------FLNNNQLSSQEKKRIRK 301

Query: 226 LV 227
           L+
Sbjct: 302 LL 303



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 62/99 (62%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R LD   N  K+LP+++  L NL+ LN+++N   L TLP  IG L +L 
Sbjct: 41  LTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKN--QLTTLPQEIGQLKNLK 98

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L++SYN+I T+P  I  L+KLQ L L+ N L + P ++
Sbjct: 99  SLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEI 137


>gi|418712108|ref|ZP_13272853.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791375|gb|EKR85051.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 380

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 110/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L+++ NQL  LP  IG L  L+ L++S N ++++PK IE  + L+ L    N
Sbjct: 69  GKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNN 128

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L  L+ L +  N++  LPQ +  L +L+ L+   N +K++P+++E L 
Sbjct: 129 QLTTLPQEIG-QLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQ 187

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L +  N   L TLP  IG L +L  LD+S N++TTLP  IG L+ LQ L L  N L
Sbjct: 188 KLQSLGLDNN--QLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQL 245

Query: 188 VSPPMDV 194
              P ++
Sbjct: 246 TILPNEI 252



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 114/188 (60%), Gaps = 4/188 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L  +  L + +NQL  LP  IG L  L+ LD+S N L +LP+ I + ++L++
Sbjct: 179 IPKEI-EKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQD 237

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+L  LP+ IG +L NL+TL++  N++  L + +  L +L+ LD R N L   P+
Sbjct: 238 LYLVSNQLTILPNEIG-QLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPK 296

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L NL+VL++  N   L TLP  IG L +L  LD+  N++TTLP  IG L+ LQ+L 
Sbjct: 297 EIGQLKNLQVLDLGSN--QLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELF 354

Query: 182 LEGNPLVS 189
           L  N L S
Sbjct: 355 LNNNQLSS 362



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 130/227 (57%), Gaps = 11/227 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L N+  L++  NQ+K +P  I  L KL+ L +  N L +LP+ I   ++L+ 
Sbjct: 156 LPQEI-GQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQS 214

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L  LP  IG  L NL+ L +  N++ ILP  +  L +L+ L+ R N L +L +
Sbjct: 215 LDLSTNRLTTLPQEIGH-LQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSK 273

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++E L NL+ L++  N   L   P  IG L +L  LD+  N++TTLP+ IG L+ LQ L 
Sbjct: 274 EIEQLQNLKSLDLRSN--QLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLD 331

Query: 182 LEGNPLVSPPMDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
           L+ N L + P ++ + Q L  +       +NN+  S ++K  + KL+
Sbjct: 332 LDSNQLTTLPQEIGQLQNLQEL------FLNNNQLSSQEKKRIRKLL 372



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/270 (31%), Positives = 140/270 (51%), Gaps = 30/270 (11%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V  LD+ +N+ K LP  IG L  L+ L+++ N L  LPK I   ++L +LN + N+++
Sbjct: 49  LKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIK 108

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            +P  I  +L  L++L +  N++  LPQ +  L  L+ L    N L +LP+++  L NL+
Sbjct: 109 TIPKEIE-KLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLK 167

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+S  +  ++T+P  I  L  L  L +  N++TTLP  IG L+ LQ L L  N L + 
Sbjct: 168 SLNLS--YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTL 225

Query: 191 PMDVVE----QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGALRNHR----SE 242
           P ++      Q L  V   L+   N           +G+L    T N  LRN+R    S+
Sbjct: 226 PQEIGHLQNLQDLYLVSNQLTILPNE----------IGQLKNLQTLN--LRNNRLTTLSK 273

Query: 243 ERERFIMSDFRAIDGLAS-----PRHIGMF 267
           E E+  + + +++D  ++     P+ IG  
Sbjct: 274 EIEQ--LQNLKSLDLRSNQLTIFPKEIGQL 301



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R LD   N  K+LP+++  L NL+ LN+++N   L  LP  IG L +L 
Sbjct: 41  LTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKN--QLTILPKEIGQLKNLR 98

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +L++S N+I T+P  I  L+KLQ L L  N L + P ++
Sbjct: 99  KLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEI 137


>gi|194882925|ref|XP_001975560.1| GG20492 [Drosophila erecta]
 gi|190658747|gb|EDV55960.1| GG20492 [Drosophila erecta]
          Length = 849

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/180 (39%), Positives = 114/180 (63%), Gaps = 3/180 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           VL V+SN L+ +P +IG L +L+ LD++ NL+ ++P+ I++C+ L  L+ + N L++LPD
Sbjct: 67  VLHVNSNNLESIPQAIGSLRQLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPD 126

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            I   LI+L+ L +N   +  LP +   L +LR+L+ RLN L +LP+ +  LINL+ L+I
Sbjct: 127 AIT-SLISLQELLLNETYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQRLDI 185

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N ++ E LP  +G L SL EL + +N+I  +  +IG LR LQ     GN L + P ++
Sbjct: 186 GGN-EFTE-LPEVVGELKSLRELWIDFNQIRRVSANIGKLRDLQHFEANGNLLDTLPSEL 243



 Score = 97.1 bits (240), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 115/193 (59%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+++T+ L+++  L ++   L+ LP + G L  L++L++  N L +LPK++    +L+ 
Sbjct: 124 LPDAITS-LISLQELLLNETYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQR 182

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+  +LP+ +G EL +L+ L I+ N+I  +  ++  L  L+  +A  N L +LP 
Sbjct: 183 LDIGGNEFTELPEVVG-ELKSLRELWIDFNQIRRVSANIGKLRDLQHFEANGNLLDTLPS 241

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L N  N+EVL+I  N   LE  P+S+G+L SLV      N +T LPDSI  L +L++L 
Sbjct: 242 ELSNWRNVEVLSICSN--SLEAFPFSVGMLKSLVTFKCESNGLTELPDSISYLEQLEELV 299

Query: 182 LEGNPLVSPPMDV 194
           L  N L+  P  +
Sbjct: 300 LSHNKLIRLPSTI 312



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/152 (37%), Positives = 82/152 (53%), Gaps = 3/152 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV VL + SN L+  P S+G L  L       N L  LP +I     LEEL  + NKL +
Sbjct: 248 NVEVLSICSNSLEAFPFSVGMLKSLVTFKCESNGLTELPDSISYLEQLEELVLSHNKLIR 307

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP TIG  L +L+ L  + N++  LP  L     L VL    N L +LP+++ NL  ++V
Sbjct: 308 LPSTIGM-LRSLRFLFADDNQLRQLPDELCSCQQLSVLSVANNQLSALPQNIGNLSKMKV 366

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           LN+  N  Y+  LP S+  L++L  + +S N+
Sbjct: 367 LNVVNN--YINALPVSMLNLVNLTSMWLSDNQ 396



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 93/181 (51%), Gaps = 3/181 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD  +  L   P        L+ L +S   L++LP  +  C+ L  L+ N N L  +P  
Sbjct: 22  LDYSNTPLTDFPEVWQHERTLEELYLSTTRLQALPPQLFYCQGLRVLHVNSNNLESIPQA 81

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L  L+ L +N N IV +P+ +     L  LD   N L+ LP+ + +LI+L+ L ++
Sbjct: 82  IG-SLRQLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITSLISLQELLLN 140

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
           +   YLE LP + G L++L  L++  N + TLP S+  L  LQ+L + GN     P  V 
Sbjct: 141 ET--YLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQRLDIGGNEFTELPEVVG 198

Query: 196 E 196
           E
Sbjct: 199 E 199



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 97/184 (52%), Gaps = 6/184 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++   + + N L  LP+ +     ++VL +  N LE+ P ++   +SL       N
Sbjct: 221 GKLRDLQHFEANGNLLDTLPSELSNWRNVEVLSICSNSLEAFPFSVGMLKSLVTFKCESN 280

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L +LPD+I + L  L+ L ++ NK++ LP ++  L SLR L A  N L+ LP++L +  
Sbjct: 281 GLTELPDSISY-LEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQLRQLPDELCSCQ 339

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN-- 185
            L VL+++ N   L  LP +IG L  +  L+V  N I  LP S+  L  L  + L  N  
Sbjct: 340 QLSVLSVANN--QLSALPQNIGNLSKMKVLNVVNNYINALPVSMLNLVNLTSMWLSDNQS 397

Query: 186 -PLV 188
            PLV
Sbjct: 398 QPLV 401



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 79/141 (56%), Gaps = 8/141 (5%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L ++V     SN L  LP+SI  L +L+ L +S N L  LP TI   RSL  L A+ N+L
Sbjct: 269 LKSLVTFKCESNGLTELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQL 328

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           RQLPD +      L  LS+  N++  LPQ++ +L+ ++VL+   N + +LP  + NL+NL
Sbjct: 329 RQLPDELC-SCQQLSVLSVANNQLSALPQNIGNLSKMKVLNVVNNYINALPVSMLNLVNL 387

Query: 130 EVLNISQN-------FQYLET 143
             + +S N        QYL+ 
Sbjct: 388 TSMWLSDNQSQPLVPLQYLDA 408


>gi|301780906|ref|XP_002925869.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Ailuropoda melanoleuca]
 gi|281346252|gb|EFB21836.1| hypothetical protein PANDA_015445 [Ailuropoda melanoleuca]
          Length = 603

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/217 (39%), Positives = 120/217 (55%), Gaps = 30/217 (13%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P S ++ L ++V L++ SNQLK LP  I  + +LK LD + NLLE++P  + N  SLE 
Sbjct: 190 VPASFSS-LSSLVRLNLSSNQLKSLPAEISGMKRLKHLDCNSNLLEAVPPELANMESLEL 248

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVIL-PQSLTHLTSLRVLDARLNCLKSLP 120
           L    NKLR LP+     L  LK L +  N+I IL P+ L HL S+ VLD R N LKS+P
Sbjct: 249 LYLRRNKLRFLPEFPSCRL--LKELYVGENQIEILGPEHLKHLNSILVLDLRDNKLKSVP 306

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           ++                         I LL SL  LD+S N I++LP S+G L  L+ L
Sbjct: 307 DE-------------------------ITLLQSLERLDLSNNDISSLPCSLGKLH-LKFL 340

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSP 217
           +LEGNPL +   +++ +G   V  YL  K+ +D  SP
Sbjct: 341 ALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSP 377



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/158 (37%), Positives = 92/158 (58%), Gaps = 3/158 (1%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           + L  L +S N L+SL   +    +L  L+ + N+L  LP  I  EL NL+ L+++ NK+
Sbjct: 83  TDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIR-ELENLQKLNVSHNKL 141

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
            ILP+ +T+L +L+ L  + N L  +PE  E L NLE L+IS N   L T+P S   L S
Sbjct: 142 QILPEEITNLRNLKGLYLQHNELTCIPEGFEQLFNLEDLDISNN--RLTTVPASFSSLSS 199

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LV L++S N++ +LP  I  +++L+ L    N L + P
Sbjct: 200 LVRLNLSSNQLKSLPAEISGMKRLKHLDCNSNLLEAVP 237



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 27/208 (12%)

Query: 29  SIGCLSKLKVLDVSGNLLESLPKTIENCRS---LEELNANFNKLRQLPDTIGFELINLKT 85
           ++  +  LK+LD SG     +P  + +      +  +N + N+L ++P  I  EL  + +
Sbjct: 395 NVHAIITLKILDYSGKQTTLIPDEVFDAVKGNIITSVNFSKNQLCEIPKRI-VELKEMVS 453

Query: 86  -LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN------- 137
            ++++ NK+  +   L  L  L  LD R N L SLPE++E+LI L+ +N+S N       
Sbjct: 454 DVNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLIKLQTINLSFNRFKILPE 513

Query: 138 ----FQYLETL-----------PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
                  LET+           P  +  + +L+ LD+  N +  +P  +G    L+ L L
Sbjct: 514 VLYHIPTLETILISNNQVGSVDPQKMKAMENLITLDLQNNDLLQIPPELGNCVNLRTLLL 573

Query: 183 EGNPLVSPPMDVVEQGLSAVKGYLSEKM 210
           +GNP   P   ++ +G +A+  YL +++
Sbjct: 574 DGNPFRVPRAAILMKGTAAILEYLRDRI 601



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 83/181 (45%), Gaps = 30/181 (16%)

Query: 39  LDVSGNLLESLPKTIE--NCRSLEELNAN--FNKLRQLPDTIGFELINLKTLSINCNKIV 94
           L++SG  L  +P+ +   N    EE N N  F    +      +E  +L  L I+ NK+ 
Sbjct: 42  LNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATER-----WWEQTDLTKLIISNNKLQ 96

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN----------------- 137
            L   L  L +L VLD   N L SLP  +  L NL+ LN+S N                 
Sbjct: 97  SLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLQILPEEITNLRNLKG 156

Query: 138 --FQY--LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMD 193
              Q+  L  +P     L +L +LD+S N++TT+P S   L  L +L+L  N L S P +
Sbjct: 157 LYLQHNELTCIPEGFEQLFNLEDLDISNNRLTTVPASFSSLSSLVRLNLSSNQLKSLPAE 216

Query: 194 V 194
           +
Sbjct: 217 I 217



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 67/118 (56%), Gaps = 2/118 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +   +  L KL  LD+  N L SLP+ +E+   L+ +N +FN+ + LP+ + + +
Sbjct: 460 NKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLIKLQTINLSFNRFKILPEVL-YHI 518

Query: 81  INLKTLSINCNKI-VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
             L+T+ I+ N++  + PQ +  + +L  LD + N L  +P +L N +NL  L +  N
Sbjct: 519 PTLETILISNNQVGSVDPQKMKAMENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGN 576


>gi|428181668|gb|EKX50531.1| hypothetical protein GUITHDRAFT_66992 [Guillardia theta CCMP2712]
          Length = 614

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/176 (44%), Positives = 101/176 (57%), Gaps = 4/176 (2%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
            H NQ++ +P+SIG L KLK+LD S N L +LP +I    SL  L+   N L  LP TIG
Sbjct: 371 THHNQIQAIPSSIGRLLKLKILDASENQLTTLPDSIGELTSLAHLDLAVNNLEALPGTIG 430

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
             L  LK L +  NK+ ILP ++  LT+L  LD + N L SLP  + NL NL   N+ QN
Sbjct: 431 -NLTALKKLLLYRNKLTILPLTVGKLTNLETLDLQTNRLTSLPPGVGNLKNLMKFNLIQN 489

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS-PPM 192
              L  LP SIG L SL +L +  N++  LP S+  L  LQ LSL  N L   PP+
Sbjct: 490 --ALVKLPPSIGSLESLTQLSLRENQLAILPASMNMLFNLQILSLSANRLYELPPL 543



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/171 (38%), Positives = 100/171 (58%), Gaps = 3/171 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L+ +P  I  L+ L  L+V  N L SLP  I +  +LEE   + N+++ +P +IG  L
Sbjct: 328 NRLQRIPVEIQNLTSLTYLNVGKNRLPSLPNEIGDLDNLEEFRTHHNQIQAIPSSIG-RL 386

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
           + LK L  + N++  LP S+  LTSL  LD  +N L++LP  + NL  L+ L + +N   
Sbjct: 387 LKLKILDASENQLTTLPDSIGELTSLAHLDLAVNNLEALPGTIGNLTALKKLLLYRN--K 444

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L  LP ++G L +L  LD+  N++T+LP  +G L+ L K +L  N LV  P
Sbjct: 445 LTILPLTVGKLTNLETLDLQTNRLTSLPPGVGNLKNLMKFNLIQNALVKLP 495



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 26/202 (12%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  N+L  +P  I   ++++VL + GN +E LPK I    SL+EL+  +N+L  LP  
Sbjct: 254 LWLSDNRLTSMPVVIEAFTQIEVLKLVGNRIEELPKQIGTLTSLKELHLAWNQLTTLPVE 313

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE----- 130
           IG  L NL+ + ++ N++  +P  + +LTSL  L+   N L SLP ++ +L NLE     
Sbjct: 314 IG-NLANLEKMLLSHNRLQRIPVEIQNLTSLTYLNVGKNRLPSLPNEIGDLDNLEEFRTH 372

Query: 131 ------------------VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
                             +L+ S+N   L TLP SIG L SL  LD++ N +  LP +IG
Sbjct: 373 HNQIQAIPSSIGRLLKLKILDASEN--QLTTLPDSIGELTSLAHLDLAVNNLEALPGTIG 430

Query: 173 CLRKLQKLSLEGNPLVSPPMDV 194
            L  L+KL L  N L   P+ V
Sbjct: 431 NLTALKKLLLYRNKLTILPLTV 452



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 110/217 (50%), Gaps = 24/217 (11%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L  ++LD + + +  LP +IG   KLK L +S N L S+P  IE    +E L    N++ 
Sbjct: 226 LEALMLDHNKDLINSLPANIGRCEKLKELWLSDNRLTSMPVVIEAFTQIEVLKLVGNRIE 285

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
           +LP  IG  L +LK L +  N++  LP  + +L +L  +    N L+ +P +++NL +L 
Sbjct: 286 ELPKQIG-TLTSLKELHLAWNQLTTLPVEIGNLANLEKMLLSHNRLQRIPVEIQNLTSLT 344

Query: 131 VLNISQN---------------------FQYLETLPYSIGLLMSLVELDVSYNKITTLPD 169
            LN+ +N                        ++ +P SIG L+ L  LD S N++TTLPD
Sbjct: 345 YLNVGKNRLPSLPNEIGDLDNLEEFRTHHNQIQAIPSSIGRLLKLKILDASENQLTTLPD 404

Query: 170 SIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYL 206
           SIG L  L  L L  N L + P  +    L+A+K  L
Sbjct: 405 SIGELTSLAHLDLAVNNLEALPGTI--GNLTALKKLL 439



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/181 (35%), Positives = 103/181 (56%), Gaps = 5/181 (2%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L + +NQL+ LP  +G ++ L  L +  NLL+++PK I +  +L EL    N L ++P  
Sbjct: 160 LRLSNNQLESLPTEMGSMTSLTQLKLPFNLLKTVPKEIGDLENLIELTLQNNSLERIPME 219

Query: 76  IGFELINLKTLSINCNKIVI--LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLN 133
           +G +L  L+ L ++ NK +I  LP ++     L+ L    N L S+P  +E    +EVL 
Sbjct: 220 LG-KLSQLEALMLDHNKDLINSLPANIGRCEKLKELWLSDNRLTSMPVVIEAFTQIEVLK 278

Query: 134 ISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMD 193
           +  N   +E LP  IG L SL EL +++N++TTLP  IG L  L+K+ L  N L   P++
Sbjct: 279 LVGN--RIEELPKQIGTLTSLKELHLAWNQLTTLPVEIGNLANLEKMLLSHNRLQRIPVE 336

Query: 194 V 194
           +
Sbjct: 337 I 337



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/232 (33%), Positives = 109/232 (46%), Gaps = 63/232 (27%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP S+  RLL + +LD   NQL  LP+SIG L+ L  LD++ N LE+LP TI N  +L++
Sbjct: 379 IPSSI-GRLLKLKILDASENQLTTLPDSIGELTSLAHLDLAVNNLEALPGTIGNLTALKK 437

Query: 62  LNANFNKLRQLPDTIG----FELINLKT-------------------------------- 85
           L    NKL  LP T+G     E ++L+T                                
Sbjct: 438 LLLYRNKLTILPLTVGKLTNLETLDLQTNRLTSLPPGVGNLKNLMKFNLIQNALVKLPPS 497

Query: 86  ---------LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI--------- 127
                    LS+  N++ ILP S+  L +L++L    N L  LP  +E+L          
Sbjct: 498 IGSLESLTQLSLRENQLAILPASMNMLFNLQILSLSANRLYELPPLIEDLTTLQVCQDLP 557

Query: 128 ------NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGC 173
                 +L+VL IS N   LETLP  IG   +L +L VS N++  LP +IG 
Sbjct: 558 QKSLTPSLQVLTISDN--ALETLPVKIGNFRALTQLAVSNNQLKELPATIGA 607



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 97/220 (44%), Gaps = 43/220 (19%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            R+ N+  L +  N L  LP++IG L KL  L V  N +  LP  +    +L +L  ++N
Sbjct: 64  VRMTNLTQLKLFKNNLTNLPSAIGGLLKLTSLSVIDNKISVLPPEMGKLLNLRKLRISYN 123

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIV-------------------ILPQSLTHLTSLRV 108
              +L   IG ++  L++L  + N I                     LP  +  +TSL  
Sbjct: 124 DFTKLTPVIG-QMTKLESLKADNNSITHLIPEFGKLDLRLSNNQLESLPTEMGSMTSLTQ 182

Query: 109 LDARLNCLKSLPE---DLENLI--------------------NLEVLNISQNFQYLETLP 145
           L    N LK++P+   DLENLI                     LE L +  N   + +LP
Sbjct: 183 LKLPFNLLKTVPKEIGDLENLIELTLQNNSLERIPMELGKLSQLEALMLDHNKDLINSLP 242

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            +IG    L EL +S N++T++P  I    +++ L L GN
Sbjct: 243 ANIGRCEKLKELWLSDNRLTSMPVVIEAFTQIEVLKLVGN 282



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 7/179 (3%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  N L  +P  +  ++ L  L +  N L +LP  I     L  L+   NK+  LP  
Sbjct: 49  LDLSCNGLTFVPIEVVRMTNLTQLKLFKNNLTNLPSAIGGLLKLTSLSVIDNKISVLPPE 108

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           +G +L+NL+ L I+ N    L   +  +T L  L A  N +  L  +   L     L +S
Sbjct: 109 MG-KLLNLRKLRISYNDFTKLTPVIGQMTKLESLKADNNSITHLIPEFGKL----DLRLS 163

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   LE+LP  +G + SL +L + +N + T+P  IG L  L +L+L+ N L   PM++
Sbjct: 164 NN--QLESLPTEMGSMTSLTQLKLPFNLLKTVPKEIGDLENLIELTLQNNSLERIPMEL 220



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 16/96 (16%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLS---------------KLKVLDVSGNL 45
           ++P S+   L N+ +L + +N+L  LP  I  L+                L+VL +S N 
Sbjct: 516 ILPASMNM-LFNLQILSLSANRLYELPPLIEDLTTLQVCQDLPQKSLTPSLQVLTISDNA 574

Query: 46  LESLPKTIENCRSLEELNANFNKLRQLPDTIGFELI 81
           LE+LP  I N R+L +L  + N+L++LP TIG   I
Sbjct: 575 LETLPVKIGNFRALTQLAVSNNQLKELPATIGASCI 610


>gi|374331887|ref|YP_005082071.1| outermembrane protein [Pseudovibrio sp. FO-BEG1]
 gi|359344675|gb|AEV38049.1| outermembrane protein [Pseudovibrio sp. FO-BEG1]
          Length = 290

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 113/200 (56%), Gaps = 7/200 (3%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE+LT +L  + +LD+    L+CLP++IG L +L+VL  S  ++  LP +I    +LE 
Sbjct: 90  LPETLT-QLSQLQILDLSHQPLECLPSTIGALKQLRVLYASNTVMTELPNSIGELTALEY 148

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
                N +RQLPD+IG +L NL+ L +  N +  LPQ+ + L+SLR    R N L  LP 
Sbjct: 149 FGCTDNNIRQLPDSIG-QLKNLQELRLYGNGLKELPQTFSKLSSLRETYLRNNALTKLPP 207

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L  LE+L++  N   +  LP  IG L +L +LD+  N +  LP+S+  L  L+KL 
Sbjct: 208 NISELKQLEILDLRDN--QINRLPEDIGGLTNLYQLDLRANPLEELPNSMKNLTNLRKLD 265

Query: 182 LEGNPLVSPP---MDVVEQG 198
           L    L   P    D+  QG
Sbjct: 266 LRWTRLTEEPDWFRDLRAQG 285



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 88/179 (49%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  N L  +P+    L+ LK L + G  L  LP+T+     L+ L+ +   L  LP T
Sbjct: 57  LYLGENALSEVPSEFSRLTSLKELYIYGCKLHRLPETLTQLSQLQILDLSHQPLECLPST 116

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L  L+ L  +   +  LP S+  LT+L       N ++ LP+ +  L NL+ L + 
Sbjct: 117 IG-ALKQLRVLYASNTVMTELPNSIGELTALEYFGCTDNNIRQLPDSIGQLKNLQELRLY 175

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L+ LP +   L SL E  +  N +T LP +I  L++L+ L L  N +   P D+
Sbjct: 176 GNG--LKELPQTFSKLSSLRETYLRNNALTKLPPNISELKQLEILDLRDNQINRLPEDI 232



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 3/185 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L + +  L  +P+ +     L+ L +  N L  +P       SL+EL     KL +
Sbjct: 30  NLTDLALTNCGLTVIPSEVFTRKALESLYLGENALSEVPSEFSRLTSLKELYIYGCKLHR 89

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+T+  +L  L+ L ++   +  LP ++  L  LRVL A    +  LP  +  L  LE 
Sbjct: 90  LPETLT-QLSQLQILDLSHQPLECLPSTIGALKQLRVLYASNTVMTELPNSIGELTALEY 148

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
              + N   +  LP SIG L +L EL +  N +  LP +   L  L++  L  N L   P
Sbjct: 149 FGCTDN--NIRQLPDSIGQLKNLQELRLYGNGLKELPQTFSKLSSLRETYLRNNALTKLP 206

Query: 192 MDVVE 196
            ++ E
Sbjct: 207 PNISE 211


>gi|195486155|ref|XP_002091384.1| GE13624 [Drosophila yakuba]
 gi|194177485|gb|EDW91096.1| GE13624 [Drosophila yakuba]
          Length = 849

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/180 (39%), Positives = 114/180 (63%), Gaps = 3/180 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           VL V+SN L+ +P +IG L +L+ LD++ NL+ ++P+ I++C+ L  L+ + N L++LPD
Sbjct: 67  VLHVNSNNLESIPQAIGSLRQLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPD 126

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            I   LI+L+ L +N   +  LP +   L +LR+L+ RLN L +LP+ +  LINL+ L+I
Sbjct: 127 AIT-SLISLQELLLNETYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQRLDI 185

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N ++ E LP  +G L SL EL + +N+I  +  +IG LR LQ     GN L + P ++
Sbjct: 186 GGN-EFTE-LPEVVGELKSLRELWIDFNQIRRVSANIGKLRDLQHFEANGNLLDTLPSEL 243



 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 116/193 (60%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+++T+ L+++  L ++   L+ LP + G L  L++L++  N L +LPK++    +L+ 
Sbjct: 124 LPDAITS-LISLQELLLNETYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQR 182

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+  +LP+ +G EL +L+ L I+ N+I  +  ++  L  L+  +A  N L +LP 
Sbjct: 183 LDIGGNEFTELPEVVG-ELKSLRELWIDFNQIRRVSANIGKLRDLQHFEANGNLLDTLPS 241

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L N  N+EVL+I  N   LE  P+S+G+L SLV L    N +T LPDSI  L +L++L 
Sbjct: 242 ELSNWRNVEVLSICSN--SLEAFPFSVGMLKSLVTLKCESNGLTELPDSISYLEQLEELV 299

Query: 182 LEGNPLVSPPMDV 194
           L  N L+  P  +
Sbjct: 300 LSHNKLIRLPSTI 312



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 58/152 (38%), Positives = 83/152 (54%), Gaps = 3/152 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV VL + SN L+  P S+G L  L  L    N L  LP +I     LEEL  + NKL +
Sbjct: 248 NVEVLSICSNSLEAFPFSVGMLKSLVTLKCESNGLTELPDSISYLEQLEELVLSHNKLIR 307

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP TIG  L +L+ L  + N++  LP  L     L VL    N L +LP+++ NL  ++V
Sbjct: 308 LPSTIGM-LRSLRFLFADDNQLRQLPDELCSCQQLSVLSVANNQLSALPQNIGNLSKMKV 366

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           LN+  N  Y+  LP S+  L++L  + +S N+
Sbjct: 367 LNVVNN--YINALPVSMLNLVNLTSMWLSDNQ 396



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 6/184 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++   + + N L  LP+ +     ++VL +  N LE+ P ++   +SL  L    N
Sbjct: 221 GKLRDLQHFEANGNLLDTLPSELSNWRNVEVLSICSNSLEAFPFSVGMLKSLVTLKCESN 280

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L +LPD+I + L  L+ L ++ NK++ LP ++  L SLR L A  N L+ LP++L +  
Sbjct: 281 GLTELPDSISY-LEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQLRQLPDELCSCQ 339

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN-- 185
            L VL+++ N   L  LP +IG L  +  L+V  N I  LP S+  L  L  + L  N  
Sbjct: 340 QLSVLSVANN--QLSALPQNIGNLSKMKVLNVVNNYINALPVSMLNLVNLTSMWLSDNQS 397

Query: 186 -PLV 188
            PLV
Sbjct: 398 QPLV 401



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 93/181 (51%), Gaps = 3/181 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD  +  L   P        L+ L +S   L++LP  +  C+ L  L+ N N L  +P  
Sbjct: 22  LDYSNTPLTDFPEVWQHERTLEELYLSTTRLQALPPQLFYCQGLRVLHVNSNNLESIPQA 81

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L  L+ L +N N IV +P+ +     L  LD   N L+ LP+ + +LI+L+ L ++
Sbjct: 82  IG-SLRQLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITSLISLQELLLN 140

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
           +   YLE LP + G L++L  L++  N + TLP S+  L  LQ+L + GN     P  V 
Sbjct: 141 ET--YLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQRLDIGGNEFTELPEVVG 198

Query: 196 E 196
           E
Sbjct: 199 E 199



 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/141 (38%), Positives = 80/141 (56%), Gaps = 8/141 (5%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L ++V L   SN L  LP+SI  L +L+ L +S N L  LP TI   RSL  L A+ N+L
Sbjct: 269 LKSLVTLKCESNGLTELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQL 328

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           RQLPD +      L  LS+  N++  LPQ++ +L+ ++VL+   N + +LP  + NL+NL
Sbjct: 329 RQLPDELC-SCQQLSVLSVANNQLSALPQNIGNLSKMKVLNVVNNYINALPVSMLNLVNL 387

Query: 130 EVLNISQN-------FQYLET 143
             + +S N        QYL+ 
Sbjct: 388 TSMWLSDNQSQPLVPLQYLDA 408


>gi|440791488|gb|ELR12726.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 623

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/205 (35%), Positives = 113/205 (55%), Gaps = 3/205 (1%)

Query: 6   LTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNAN 65
           L+A+  +   L +  N L  LP  I    +L+ LD+  N L +LP  +  C  LEEL   
Sbjct: 416 LSAKFSSPSNLSLAKNGLTALPAQIEAFGRLRRLDLGDNKLTALPLELGKCVLLEELILQ 475

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
            N L ++P  + FEL  L  L I+ N+I +LP  +  L SL +L AR N +++LP +L  
Sbjct: 476 KNSLTEIPAVV-FELTRLTELDISFNRITVLPPGIAQLVSLTILRARQNSIRALPSELYM 534

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L  L+VL++   F  +ETL   +  L SL  LD+  N I T+P  +G +  L+ L+LEGN
Sbjct: 535 LPKLDVLDVF--FNKIETLDVELTKLTSLRALDLGSNDIVTVPPQLGLMTSLRSLNLEGN 592

Query: 186 PLVSPPMDVVEQGLSAVKGYLSEKM 210
            + +    +++QG S++  YL  ++
Sbjct: 593 RIRAIRPAILQQGTSSLLEYLRNRI 617



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 39/266 (14%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLS-----------------------KLKVLDVSGNLLESL 49
           +V L + +N+L CLP ++GCLS                       +++VLD+S N L SL
Sbjct: 163 LVHLLLQNNELCCLPEALGCLSALSNLNLAHNRLVELPATMALLPRIEVLDLSANKLTSL 222

Query: 50  PKTIEN-CRSLEELNANFNKLRQLPD------TIGFELINLKTLSINCNKIVILPQSLTH 102
           P    N   +L EL    N+L  LP       T G+ L  L  L ++ N++  LP  +  
Sbjct: 223 PAEARNGWGTLRELELRGNQLAGLPAVTSKDPTAGWPL--LARLDLSQNRLRELPSDVAL 280

Query: 103 LTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN-FQYLETLPYSIGLLMSLVELDVSY 161
             SLR L A  N L+SLP +L  L +L +L++ +N   + +   +S    ++L  LD+S 
Sbjct: 281 FYSLRELYAAKNLLQSLPAELNTLTSLAILDLKENSLTHFKKEHFSN---LALQILDLSL 337

Query: 162 NKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKS 221
           N + T+P ++G +  L+ L++ GNPL+     V++QG   +  YL  ++  D ++ K+ +
Sbjct: 338 NSLKTIPPALGRMTTLKTLAIAGNPLMGFKRGVIDQGTDEILKYLRFRLPPDDQA-KQTA 396

Query: 222 WVGKLVKYGTFNGALRNHRSEERERF 247
               L+    +N   R+H  +   +F
Sbjct: 397 TSFALIVESAYNE--RSHSLDLSAKF 420



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 63/118 (53%), Gaps = 9/118 (7%)

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
           F+L NL TL ++ NK+  LP  + +   L  L  + N L  LPE L  L  L  LN++ N
Sbjct: 135 FQLENLTTLDLSHNKLARLPDEVANARQLVHLLLQNNELCCLPEALGCLSALSNLNLAHN 194

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLP----DSIGCLRKLQKLSLEGNPLVSPP 191
              L  LP ++ LL  +  LD+S NK+T+LP    +  G LR+L+   L GN L   P
Sbjct: 195 --RLVELPATMALLPRIEVLDLSANKLTSLPAEARNGWGTLRELE---LRGNQLAGLP 247



 Score = 38.1 bits (87), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 2/92 (2%)

Query: 104 TSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           T +    A  N + S+   L  L NL  L++S N   L  LP  +     LV L +  N+
Sbjct: 115 TEVNTFCAAQNKIVSISPQLFQLENLTTLDLSHN--KLARLPDEVANARQLVHLLLQNNE 172

Query: 164 ITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
           +  LP+++GCL  L  L+L  N LV  P  + 
Sbjct: 173 LCCLPEALGCLSALSNLNLAHNRLVELPATMA 204


>gi|19922294|ref|NP_611007.1| Lap1, isoform A [Drosophila melanogaster]
 gi|320543977|ref|NP_001188938.1| Lap1, isoform B [Drosophila melanogaster]
 gi|51316545|sp|Q9V780.1|LAP1_DROME RecName: Full=Protein lap1
 gi|7303113|gb|AAF58179.1| Lap1, isoform A [Drosophila melanogaster]
 gi|40882491|gb|AAR96157.1| RE64484p [Drosophila melanogaster]
 gi|318068607|gb|ADV37184.1| Lap1, isoform B [Drosophila melanogaster]
          Length = 849

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/180 (39%), Positives = 114/180 (63%), Gaps = 3/180 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           VL V+SN L+ +P +IG L +L+ LD++ NL+ ++P+ I++C+ L  L+ + N L++LPD
Sbjct: 67  VLHVNSNNLESIPQAIGSLRQLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPD 126

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            I   LI+L+ L +N   +  LP +   L +LR+L+ RLN L +LP+ +  LINL+ L+I
Sbjct: 127 AIT-SLISLQELLLNETYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQRLDI 185

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N ++ E LP  +G L SL EL + +N+I  +  +IG LR LQ     GN L + P ++
Sbjct: 186 GGN-EFTE-LPEVVGELKSLRELWIDFNQIRRVSANIGKLRDLQHFEANGNLLDTLPSEL 243



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 115/193 (59%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+++T+ L+++  L ++   L+ LP + G L  L++L++  N L +LPK++    +L+ 
Sbjct: 124 LPDAITS-LISLQELLLNETYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQR 182

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+  +LP+ +G EL +L+ L I+ N+I  +  ++  L  L+  +A  N L +LP 
Sbjct: 183 LDIGGNEFTELPEVVG-ELKSLRELWIDFNQIRRVSANIGKLRDLQHFEANGNLLDTLPS 241

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L N  N+EVL+I  N   LE  P+S+G+L SLV      N +T LPDSI  L +L++L 
Sbjct: 242 ELSNWRNVEVLSICSN--SLEAFPFSVGMLKSLVTFKCESNGLTELPDSISYLEQLEELV 299

Query: 182 LEGNPLVSPPMDV 194
           L  N L+  P  +
Sbjct: 300 LSHNKLIRLPSTI 312



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/152 (37%), Positives = 82/152 (53%), Gaps = 3/152 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV VL + SN L+  P S+G L  L       N L  LP +I     LEEL  + NKL +
Sbjct: 248 NVEVLSICSNSLEAFPFSVGMLKSLVTFKCESNGLTELPDSISYLEQLEELVLSHNKLIR 307

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP TIG  L +L+ L  + N++  LP  L     L VL    N L +LP+++ NL  ++V
Sbjct: 308 LPSTIGM-LRSLRFLFADDNQLRQLPDELCSCQQLSVLSVANNQLSALPQNIGNLSKMKV 366

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           LN+  N  Y+  LP S+  L++L  + +S N+
Sbjct: 367 LNVVNN--YINALPVSMLNLVNLTSMWLSDNQ 396



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 92/181 (50%), Gaps = 3/181 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD  +  L   P        L+ L +S   L++LP  +  C+ L  L+ N N L  +P  
Sbjct: 22  LDYSNTPLTDFPEVWQHERTLEELYLSTTRLQALPPQLFYCQGLRVLHVNSNNLESIPQA 81

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L  L+ L +N N IV +P+ +     L  LD   N L+ LP+ + +LI+L+ L + 
Sbjct: 82  IG-SLRQLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITSLISLQELLL- 139

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            N  YLE LP + G L++L  L++  N + TLP S+  L  LQ+L + GN     P  V 
Sbjct: 140 -NETYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQRLDIGGNEFTELPEVVG 198

Query: 196 E 196
           E
Sbjct: 199 E 199



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 97/184 (52%), Gaps = 6/184 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++   + + N L  LP+ +     ++VL +  N LE+ P ++   +SL       N
Sbjct: 221 GKLRDLQHFEANGNLLDTLPSELSNWRNVEVLSICSNSLEAFPFSVGMLKSLVTFKCESN 280

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L +LPD+I + L  L+ L ++ NK++ LP ++  L SLR L A  N L+ LP++L +  
Sbjct: 281 GLTELPDSISY-LEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQLRQLPDELCSCQ 339

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN-- 185
            L VL+++ N   L  LP +IG L  +  L+V  N I  LP S+  L  L  + L  N  
Sbjct: 340 QLSVLSVANN--QLSALPQNIGNLSKMKVLNVVNNYINALPVSMLNLVNLTSMWLSDNQS 397

Query: 186 -PLV 188
            PLV
Sbjct: 398 QPLV 401



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 79/141 (56%), Gaps = 8/141 (5%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L ++V     SN L  LP+SI  L +L+ L +S N L  LP TI   RSL  L A+ N+L
Sbjct: 269 LKSLVTFKCESNGLTELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQL 328

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           RQLPD +      L  LS+  N++  LPQ++ +L+ ++VL+   N + +LP  + NL+NL
Sbjct: 329 RQLPDELC-SCQQLSVLSVANNQLSALPQNIGNLSKMKVLNVVNNYINALPVSMLNLVNL 387

Query: 130 EVLNISQN-------FQYLET 143
             + +S N        QYL+ 
Sbjct: 388 TSMWLSDNQSQPLVPLQYLDA 408


>gi|421130781|ref|ZP_15590973.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410357884|gb|EKP05089.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 312

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/184 (41%), Positives = 115/184 (62%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++   +L  LP  IG L  L+ L +S N L  LPK I   ++LE L+ + N+L 
Sbjct: 48  LDVRVLNLSGQKLTSLPKEIGQLKNLQSLYLSDNQLTILPKEIVELQNLEHLDLSENQLV 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ IG  L NL++L +  NK+  LP+ +  L +L++L +  N L  LP+++  L NLE
Sbjct: 108 ILPNEIG-RLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPKEIGQLENLE 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+S+N   L T+P  IG L +L EL +S N++ TLP+ IG LR LQ+L+L+ N LV+ 
Sbjct: 167 NLNLSEN--RLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQLRNLQELNLKWNQLVTL 224

Query: 191 PMDV 194
           P  +
Sbjct: 225 PKGI 228



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  LD+  NQL  LPN IG L  L+ LD+  N L +LPK I   ++L+ L +  N
Sbjct: 91  VELQNLEHLDLSENQLVILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPEN 150

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L+++ N++  +P+ +  L +L+ L    N L +LP ++  L 
Sbjct: 151 RLAILPKEIG-QLENLENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQLR 209

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+  N   L TLP  IG L +L  LD+  N++T LP   G L+ LQKL+L  N L
Sbjct: 210 NLQELNLKWN--QLVTLPKGIGRLQNLQTLDLHENRLTILPREFGQLQSLQKLNLVNNRL 267

Query: 188 VSPPMDV 194
           +  P ++
Sbjct: 268 IILPKEI 274



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/186 (38%), Positives = 105/186 (56%), Gaps = 3/186 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  NQL  LP  I  L  L+ LD+S N L  LP  I   ++L+ L+   N
Sbjct: 68  GQLKNLQSLYLSDNQLTILPKEIVELQNLEHLDLSENQLVILPNEIGRLKNLQSLDLYKN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  LP  IG +L NL+ L    N++ ILP+ +  L +L  L+   N L ++P+++  L 
Sbjct: 128 KLTTLPKEIG-QLQNLQMLWSPENRLAILPKEIGQLENLENLNLSENRLTTVPKEIGQLK 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++S N   L TLP  IG L +L EL++ +N++ TLP  IG L+ LQ L L  N L
Sbjct: 187 NLQELHLSGN--QLVTLPNEIGQLRNLQELNLKWNQLVTLPKGIGRLQNLQTLDLHENRL 244

Query: 188 VSPPMD 193
              P +
Sbjct: 245 TILPRE 250



 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 71/117 (60%), Gaps = 1/117 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  N+L  +P  IG L  L+ L +SGN L +LP  I   R+L+ELN  +N
Sbjct: 160 GQLENLENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQLRNLQELNLKWN 219

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLE 124
           +L  LP  IG  L NL+TL ++ N++ ILP+    L SL+ L+   N L  LP+++E
Sbjct: 220 QLVTLPKGIG-RLQNLQTLDLHENRLTILPREFGQLQSLQKLNLVNNRLIILPKEIE 275



 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVL+     L SLP+++  L NL+ L +S N   L  LP  I  L +L 
Sbjct: 40  LTKALQNPLDVRVLNLSGQKLTSLPKEIGQLKNLQSLYLSDN--QLTILPKEIVELQNLE 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LD+S N++  LP+ IG L+ LQ L L  N L + P ++
Sbjct: 98  HLDLSENQLVILPNEIGRLKNLQSLDLYKNKLTTLPKEI 136


>gi|333983716|ref|YP_004512926.1| adenylate cyclase [Methylomonas methanica MC09]
 gi|333807757|gb|AEG00427.1| Adenylate cyclase [Methylomonas methanica MC09]
          Length = 504

 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/207 (39%), Positives = 119/207 (57%), Gaps = 18/207 (8%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+ ++L+N+  L +  N+L  LP SIG L+KL+ L +SGN L  LPK+I N R L E
Sbjct: 178 LPESI-SKLINLTNLSLSDNKLNILPESIGNLTKLRSLTLSGNQLTKLPKSIGNLRKLSE 236

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINC--------------NKIVILPQSLTHLTSLR 107
           L+   N L ++P+ IG  LINL +LS+                + +  LP+S+ +L  L+
Sbjct: 237 LSLAGNNLTEVPECIG-NLINLTSLSLGSGSRGVLKTKSPESNDTLKKLPESIGNLKMLK 295

Query: 108 VLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
                   L  LPE + NL NL  L + +N Q +E LP SIG L  L +L +SYN++  L
Sbjct: 296 SFSIGSTQLTKLPESIGNLTNLRELFL-ENNQLIE-LPESIGNLTKLDDLRLSYNQLIKL 353

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           PD IG L KL+++ LE N L+  P  +
Sbjct: 354 PDCIGNLTKLKRIILENNQLIDLPESI 380



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/183 (43%), Positives = 109/183 (59%), Gaps = 4/183 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +L++  LD+  NQL  +P+ IG L  L  LD+S N L  LP++I N   L +L   FNKL
Sbjct: 69  ILSLTHLDLRHNQLTEVPDYIGKLINLTCLDLSNNQLTKLPESIGNLTRLTDLYLQFNKL 128

Query: 70  RQLPDTIGFELINL-KTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
             LP++IG  L NL  +L ++ N++  LP S+ +L++L  +    N L  LPE +  LIN
Sbjct: 129 SDLPESIG-RLTNLTNSLWLSNNQLKKLPDSIGNLSNLTGIILSGNQLTELPESISKLIN 187

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L  L++S N   L  LP SIG L  L  L +S N++T LP SIG LRKL +LSL GN L 
Sbjct: 188 LTNLSLSDN--KLNILPESIGNLTKLRSLTLSGNQLTKLPKSIGNLRKLSELSLAGNNLT 245

Query: 189 SPP 191
             P
Sbjct: 246 EVP 248



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 79/193 (40%), Positives = 111/193 (57%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+   L N+  L + +NQL  LP SIG L+KL  L +S N L  LP  I N   L+ 
Sbjct: 307 LPESI-GNLTNLRELFLENNQLIELPESIGNLTKLDDLRLSYNQLIKLPDCIGNLTKLKR 365

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           +    N+L  LP++IG  + NL  L ++ N+++ LP+SL +LT L  L    N L  +PE
Sbjct: 366 IILENNQLIDLPESIG-NMTNLVELRLSDNQLIKLPESLGNLTKLEYLQLNHNRLVEIPE 424

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + NL  L  L+I  N Q +E LP SIG L  L  L +  N+IT LP+S G L+KL+ L 
Sbjct: 425 AIGNLTKLTRLSIGDN-QIVE-LPESIGNLSKLTRLCLHKNQITKLPESFGKLKKLKDLY 482

Query: 182 LEGNPLVSPPMDV 194
           L  NP+   P ++
Sbjct: 483 LNSNPIKYLPAEL 495



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/178 (35%), Positives = 100/178 (56%), Gaps = 4/178 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+   L  +  L +  NQL  LP+ IG L+KLK + +  N L  LP++I N  +L E
Sbjct: 330 LPESI-GNLTKLDDLRLSYNQLIKLPDCIGNLTKLKRIILENNQLIDLPESIGNMTNLVE 388

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+L +LP+++G  L  L+ L +N N++V +P+++ +LT L  L    N +  LPE
Sbjct: 389 LRLSDNQLIKLPESLG-NLTKLEYLQLNHNRLVEIPEAIGNLTKLTRLSIGDNQIVELPE 447

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
            + NL  L  L + +N   +  LP S G L  L +L ++ N I  LP  +  L K+ K
Sbjct: 448 SIGNLSKLTRLCLHKN--QITKLPESFGKLKKLKDLYLNSNPIKYLPAELSHLIKITK 503


>gi|421118972|ref|ZP_15579299.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348312|gb|EKO99138.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 448

 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/243 (36%), Positives = 137/243 (56%), Gaps = 15/243 (6%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  +  L++  NQ+K LP  I  L KL+ L +  N L +LP+ IE  + LE L  + N
Sbjct: 206 GKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNN 265

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NLK L +N N++  +PQ + HL +L+ L    N L ++P+++  L 
Sbjct: 266 QLTTLPQEIG-QLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQ 324

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L++  N   L  LP  IG L +L  L +S N++TT+P  IG L+ LQ+L L  N L
Sbjct: 325 NLQMLDLGNN--QLTILPKEIGKLQNLQTLYLSNNQLTTIPKEIGQLQNLQELYLSNNQL 382

Query: 188 VSPPMDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGALRNHRS--EER 244
            + P ++ + Q L  +  YLS   NN   +  K+  +G+L    T    LRN++   EE+
Sbjct: 383 TTIPKEIGQLQNLQEL--YLS---NNQLITIPKE--IGQLQNLQTL--YLRNNQFSIEEK 433

Query: 245 ERF 247
           ER 
Sbjct: 434 ERI 436



 Score =  103 bits (256), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +LD+  NQL  LP  I  L  L++LD+  N L  LPK I   ++L+ L+   N
Sbjct: 68  GQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLHSNQLIILPKEIRQLKNLQMLDLRSN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L ++ N++   P+ +  L  L+ L+   N +K++P+++E L 
Sbjct: 128 QLTILPKEIG-KLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQ 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L +  N   L TLP  IG L  L  L++SYN+I TLP  I  L+KLQ L L  N L
Sbjct: 187 KLQSLYLPNN--QLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQL 244

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 245 TTLPQEI 251



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 109/186 (58%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ +LD+HSNQL  LP  I  L  L++LD+  N L  LPK I   ++L+EL  + N+
Sbjct: 92  QLKNLQMLDLHSNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQ 151

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L   P  IG +L  L+ L+++ N+I  +P+ +  L  L+ L    N L +LP+++  L  
Sbjct: 152 LTTFPKEIG-KLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQK 210

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ LN+S N   ++TLP  I  L  L  L +  N++TTLP  I  L+KL+ L L+ N L 
Sbjct: 211 LQWLNLSYN--QIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLT 268

Query: 189 SPPMDV 194
           + P ++
Sbjct: 269 TLPQEI 274



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 70/113 (61%), Gaps = 2/113 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L N+ +LD+ +NQL  LP  IG L  L+ L +S N L ++PK I   ++L+E
Sbjct: 316 IPKEI-GQLQNLQMLDLGNNQLTILPKEIGKLQNLQTLYLSNNQLTTIPKEIGQLQNLQE 374

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLN 114
           L  + N+L  +P  IG +L NL+ L ++ N+++ +P+ +  L +L+ L  R N
Sbjct: 375 LYLSNNQLTTIPKEIG-QLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNN 426



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 78/136 (57%), Gaps = 2/136 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +   L N+  L + SNQL  +P  IG L  L++LD+  N L  LPK I   ++L+ 
Sbjct: 293 IPQEI-GHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQT 351

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+L  +P  IG +L NL+ L ++ N++  +P+ +  L +L+ L    N L ++P+
Sbjct: 352 LYLSNNQLTTIPKEIG-QLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPK 410

Query: 122 DLENLINLEVLNISQN 137
           ++  L NL+ L +  N
Sbjct: 411 EIGQLQNLQTLYLRNN 426



 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 67/131 (51%), Gaps = 12/131 (9%)

Query: 105 SLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
            +RVL      LK+LP+ +  L NL++L++S N   L  LP  I  L +L  LD+  N++
Sbjct: 49  DVRVLILSEQKLKALPKKIGQLKNLQMLDLSDN--QLIILPKEIRQLKNLQMLDLHSNQL 106

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGLSAVKGYLSEKMNNDHKS-PKKKSW 222
             LP  I  L+ LQ L L  N L   P ++ + Q L  +  YLS   NN   + PK+   
Sbjct: 107 IILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQEL--YLS---NNQLTTFPKE--- 158

Query: 223 VGKLVKYGTFN 233
           +GKL K    N
Sbjct: 159 IGKLQKLQWLN 169


>gi|328779859|ref|XP_003249714.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Apis
           mellifera]
          Length = 565

 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/182 (37%), Positives = 109/182 (59%), Gaps = 3/182 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L +++   ++ N+L  LP  IGCL  L+ L +S N L SLP T+EN +SL  L+   NKL
Sbjct: 106 LTHLIEFYLYGNKLVTLPPEIGCLGNLETLALSENSLTSLPNTLENLKSLRVLDLRHNKL 165

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++PD + ++L NL TL +  N++  +  ++ +LT+L +L  R N ++ LP  +  LINL
Sbjct: 166 SEIPDVV-YKLTNLTTLFLRFNRVRYVSDNIRNLTNLTMLSLRENKIRELPAGIGKLINL 224

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
              ++S N  +LE LP  IG  + L  LD+ +N++  +PD+IG L  L +L L  N L +
Sbjct: 225 ITFDVSHN--HLEHLPEEIGNCVQLSTLDLQHNELLDIPDTIGNLISLTRLGLRYNRLTN 282

Query: 190 PP 191
            P
Sbjct: 283 IP 284



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 110/206 (53%), Gaps = 27/206 (13%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           +N+V L++ +NQL  +P+ I CL  L+VL +S NLL+ +P +I N R L  L+   NK+ 
Sbjct: 386 INMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASIANLRKLRVLDLEENKIE 445

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ IGF L +L+ L +  N++  LP+++ HLT+L  L    N L  LPE++  L NL+
Sbjct: 446 SLPNEIGF-LRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYLPEEIGTLENLD 504

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L ++ N   L  LP+ + L  +L               SI        +S+E  PL   
Sbjct: 505 SLYVNDNAN-LHNLPFELALCTNL---------------SI--------MSIENCPLSQI 540

Query: 191 PMDVVEQGLSAVKGYLSEKMNNDHKS 216
           P ++V  G S V  +L  KM   ++S
Sbjct: 541 PPEIVAGGPSLVIQFL--KMQGPYRS 564



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 104/196 (53%), Gaps = 5/196 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +    + +  LD+  N+L  +P++IG L  L  L +  N L ++PK++ NC+ ++E
Sbjct: 237 LPEEI-GNCVQLSTLDLQHNELLDIPDTIGNLISLTRLGLRYNRLTNIPKSLANCKLMDE 295

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ-SLTHLTSLRVLDARLNCLKSLP 120
            +   N++ QLPD +   L +L T++++ N     P       T++  ++   N +  +P
Sbjct: 296 FSVEGNQVSQLPDGLLASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIP 355

Query: 121 EDL-ENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
             +     NL  LN+ +N   L  LP  IG  +++VEL++  N++T +PD I CL+ L+ 
Sbjct: 356 YGIFSRAKNLAKLNMKEN--QLTALPLDIGTWINMVELNLGTNQLTKIPDDIQCLQNLEV 413

Query: 180 LSLEGNPLVSPPMDVV 195
           L L  N L   P  + 
Sbjct: 414 LILSNNLLKRIPASIA 429



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 93/179 (51%), Gaps = 26/179 (14%)

Query: 36  LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           L+ LD+S + +  LP T+ +   L E     NKL  LP  IG  L NL+TL+++ N +  
Sbjct: 86  LERLDLSKSNITHLPSTVRDLTHLIEFYLYGNKLVTLPPEIGC-LGNLETLALSENSLTS 144

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLP-----------------------EDLENLINLEVL 132
           LP +L +L SLRVLD R N L  +P                       +++ NL NL +L
Sbjct: 145 LPNTLENLKSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFNRVRYVSDNIRNLTNLTML 204

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           ++ +N   +  LP  IG L++L+  DVS+N +  LP+ IG   +L  L L+ N L+  P
Sbjct: 205 SLREN--KIRELPAGIGKLINLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIP 261



 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 101/195 (51%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNS-IGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +P+ L A L ++  + +  N     P+      + +  +++  N ++ +P  I    ++L
Sbjct: 306 LPDGLLASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNL 365

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP  IG   IN+  L++  N++  +P  +  L +L VL    N LK +
Sbjct: 366 AKLNMKENQLTALPLDIG-TWINMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRI 424

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  + NL  L VL++ +N   +E+LP  IG L  L +L +  N++T+LP +IG L  L  
Sbjct: 425 PASIANLRKLRVLDLEEN--KIESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTY 482

Query: 180 LSLEGNPLVSPPMDV 194
           LS+  N L   P ++
Sbjct: 483 LSVGENNLNYLPEEI 497



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 105/221 (47%), Gaps = 34/221 (15%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L N+  L +  N+++ + ++I  L+ L +L +  N +  LP  I    +L  
Sbjct: 168 IPD-VVYKLTNLTTLFLRFNRVRYVSDNIRNLTNLTMLSLRENKIRELPAGIGKLINLIT 226

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
            + + N L  LP+ IG   + L TL +  N+++ +P ++ +L SL  L  R N L ++P+
Sbjct: 227 FDVSHNHLEHLPEEIG-NCVQLSTLDLQHNELLDIPDTIGNLISLTRLGLRYNRLTNIPK 285

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVEL------------------------ 157
            L N   ++  ++  N   +  LP   GLL SL +L                        
Sbjct: 286 SLANCKLMDEFSVEGN--QVSQLPD--GLLASLSDLTTITLSRNAFTAYPSGGPAQFTNV 341

Query: 158 ---DVSYNKITTLPDSIGCLRK-LQKLSLEGNPLVSPPMDV 194
              ++ +NKI  +P  I    K L KL+++ N L + P+D+
Sbjct: 342 YSINLEHNKIDKIPYGIFSRAKNLAKLNMKENQLTALPLDI 382


>gi|418668175|ref|ZP_13229578.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756032|gb|EKR17659.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 402

 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 111/186 (59%), Gaps = 4/186 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L N+  L++ +NQLK LP  I  L  L+ L +  N L +LP  IE  ++L+ 
Sbjct: 201 IPKEI-GQLQNLQELNLWNNQLKTLPKEIEQLKNLQTLHLGSNQLTTLPNEIEQLKNLQT 259

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+  +N+L  LP  IG +L NL+ LS+  N++  LP+ +  L +L+ LD R N L +LP 
Sbjct: 260 LDLYYNQLTTLPQEIG-QLQNLQELSLYYNQLTALPKEIGQLQNLKSLDLRNNQLTTLPI 318

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L NL+ L++  N   L TLP  IG L +L  LD+  N++T LP  IG L+ LQ+L 
Sbjct: 319 EIGQLQNLKSLDLRNN--QLTTLPIEIGQLQNLKSLDLRNNQLTILPKEIGQLKNLQELY 376

Query: 182 LEGNPL 187
           L  N L
Sbjct: 377 LNNNQL 382



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 80/227 (35%), Positives = 128/227 (56%), Gaps = 9/227 (3%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP  +  +L N+  L +  NQ+K +P  IG L  L+ L++  N L++LPK IE  ++L+
Sbjct: 177 IIPNGI-WQLQNLQKLYLDYNQIKTIPKEIGQLQNLQELNLWNNQLKTLPKEIEQLKNLQ 235

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   N+L  LP+ I  +L NL+TL +  N++  LPQ +  L +L+ L    N L +LP
Sbjct: 236 TLHLGSNQLTTLPNEIE-QLKNLQTLDLYYNQLTTLPQEIGQLQNLQELSLYYNQLTALP 294

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++  L NL+ L++  N   L TLP  IG L +L  LD+  N++TTLP  IG L+ L+ L
Sbjct: 295 KEIGQLQNLKSLDLRNN--QLTTLPIEIGQLQNLKSLDLRNNQLTTLPIEIGQLQNLKSL 352

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
            L  N L   P ++       +K      +NN+  S ++K  + KL+
Sbjct: 353 DLRNNQLTILPKEI-----GQLKNLQELYLNNNQLSIEEKERIRKLL 394



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 111/186 (59%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L + +NQ+K +PN I  L  L+ L +  N ++++PK I   ++L+ELN   N+
Sbjct: 161 QLKNLQTLGLGNNQIKIIPNGIWQLQNLQKLYLDYNQIKTIPKEIGQLQNLQELNLWNNQ 220

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L+ LP  I  +L NL+TL +  N++  LP  +  L +L+ LD   N L +LP+++  L N
Sbjct: 221 LKTLPKEIE-QLKNLQTLHLGSNQLTTLPNEIEQLKNLQTLDLYYNQLTTLPQEIGQLQN 279

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L++   +  L  LP  IG L +L  LD+  N++TTLP  IG L+ L+ L L  N L 
Sbjct: 280 LQELSLY--YNQLTALPKEIGQLQNLKSLDLRNNQLTTLPIEIGQLQNLKSLDLRNNQLT 337

Query: 189 SPPMDV 194
           + P+++
Sbjct: 338 TLPIEI 343



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 115/207 (55%), Gaps = 22/207 (10%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L +  NQL  L   IG L  LKVL ++ N L +LPK IE  ++L+ L    N+
Sbjct: 115 QLKNLQTLGLGYNQLTTLSQEIGQLQNLKVLFLNNNQLTTLPKEIEQLKNLQTLGLGNNQ 174

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           ++ +P+ I ++L NL+ L ++ N+I  +P+ +  L +L+ L+   N LK+LP+++E L N
Sbjct: 175 IKIIPNGI-WQLQNLQKLYLDYNQIKTIPKEIGQLQNLQELNLWNNQLKTLPKEIEQLKN 233

Query: 129 LEVLNISQN---------------------FQYLETLPYSIGLLMSLVELDVSYNKITTL 167
           L+ L++  N                     +  L TLP  IG L +L EL + YN++T L
Sbjct: 234 LQTLHLGSNQLTTLPNEIEQLKNLQTLDLYYNQLTTLPQEIGQLQNLQELSLYYNQLTAL 293

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P  IG L+ L+ L L  N L + P+++
Sbjct: 294 PKEIGQLQNLKSLDLRNNQLTTLPIEI 320



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 110/184 (59%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++ S +L  LP  I  L  LK LD++ N  ++LPK I   ++L+ELN   N+L 
Sbjct: 48  LDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLT 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  I  +L NL+TL +  N++  L Q +  L +L+VL    N L +LP+++E L NL+
Sbjct: 108 TLPKEIE-QLKNLQTLGLGYNQLTTLSQEIGQLQNLKVLFLNNNQLTTLPKEIEQLKNLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +  N   ++ +P  I  L +L +L + YN+I T+P  IG L+ LQ+L+L  N L + 
Sbjct: 167 TLGLGNN--QIKIIPNGIWQLQNLQKLYLDYNQIKTIPKEIGQLQNLQELNLWNNQLKTL 224

Query: 191 PMDV 194
           P ++
Sbjct: 225 PKEI 228



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 108/186 (58%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  LD+ +NQ K LP  IG L  L+ L++  N L +LPK IE  ++L+ L   +N+
Sbjct: 69  QLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLTTLPKEIEQLKNLQTLGLGYNQ 128

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  L   IG +L NLK L +N N++  LP+ +  L +L+ L    N +K +P  +  L N
Sbjct: 129 LTTLSQEIG-QLQNLKVLFLNNNQLTTLPKEIEQLKNLQTLGLGNNQIKIIPNGIWQLQN 187

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +  ++  ++T+P  IG L +L EL++  N++ TLP  I  L+ LQ L L  N L 
Sbjct: 188 LQKLYL--DYNQIKTIPKEIGQLQNLQELNLWNNQLKTLPKEIEQLKNLQTLHLGSNQLT 245

Query: 189 SPPMDV 194
           + P ++
Sbjct: 246 TLPNEI 251



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVL+     L +LP++++ L NL+ L+++ N    +TLP  IG L +L 
Sbjct: 40  LTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANN--QFKTLPKEIGQLQNLQ 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           EL++  N++TTLP  I  L+ LQ L L  N L +   ++
Sbjct: 98  ELNLWNNQLTTLPKEIEQLKNLQTLGLGYNQLTTLSQEI 136


>gi|195430322|ref|XP_002063205.1| GK21518 [Drosophila willistoni]
 gi|194159290|gb|EDW74191.1| GK21518 [Drosophila willistoni]
          Length = 831

 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/182 (38%), Positives = 115/182 (63%), Gaps = 3/182 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           VL V+SN L+ +P +IG L +L+ LD++ NL+ ++P  I++C+ L  L+ + N L++LPD
Sbjct: 67  VLHVNSNNLESIPQAIGSLKQLQHLDLNRNLIVNVPDEIKSCKHLTHLDLSCNSLQRLPD 126

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            +   LI+L+ L +N   +  LP +   L +LR+L+ RLN L +LP+ +  L+NL+ L+I
Sbjct: 127 AVT-SLISLQELLLNETYLEFLPANFGRLVNLRILELRLNNLITLPKSMVRLVNLQRLDI 185

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N ++ E LP  +G L SL EL + +N+I  +  +IG LR+LQ     GN L S P ++
Sbjct: 186 GGN-EFTE-LPEVVGELKSLKELWIDFNQIRRVSANIGKLRELQHFEANGNLLDSLPNEL 243

Query: 195 VE 196
            +
Sbjct: 244 SQ 245



 Score = 94.4 bits (233), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 114/193 (59%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+++T+ L+++  L ++   L+ LP + G L  L++L++  N L +LPK++    +L+ 
Sbjct: 124 LPDAVTS-LISLQELLLNETYLEFLPANFGRLVNLRILELRLNNLITLPKSMVRLVNLQR 182

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+  +LP+ +G EL +LK L I+ N+I  +  ++  L  L+  +A  N L SLP 
Sbjct: 183 LDIGGNEFTELPEVVG-ELKSLKELWIDFNQIRRVSANIGKLRELQHFEANGNLLDSLPN 241

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L    N+EVL+I  N   LE  P+S+G+L SLV      N ++ LPDSI  L +L++L 
Sbjct: 242 ELSQWRNVEVLSICSN--NLEAFPFSVGMLKSLVTFKCESNGLSELPDSISYLEQLEELV 299

Query: 182 LEGNPLVSPPMDV 194
           L  N L+  P  +
Sbjct: 300 LSHNKLMRLPSTI 312



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/152 (38%), Positives = 79/152 (51%), Gaps = 3/152 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV VL + SN L+  P S+G L  L       N L  LP +I     LEEL  + NKL +
Sbjct: 248 NVEVLSICSNNLEAFPFSVGMLKSLVTFKCESNGLSELPDSISYLEQLEELVLSHNKLMR 307

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP TIG  L  L+ L  + N++  LP  L     L VL    N L +LP+++ NL  L V
Sbjct: 308 LPSTIGM-LKRLRFLFADDNQLRQLPDELCSCQQLSVLSVANNQLSALPQNIGNLGKLRV 366

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           LN+  N  Y+  LP S+  L+ L  L +S N+
Sbjct: 367 LNVVNN--YINALPVSMLSLVQLTSLWLSDNQ 396



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 94/184 (51%), Gaps = 3/184 (1%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           + +LD  +  L   P        L+ L +S   L++LP  +  C+ L  L+ N N L  +
Sbjct: 19  IQILDYSNTPLTDFPEVWQHERTLEELYLSTTRLQTLPPQLFYCQGLRVLHVNSNNLESI 78

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P  IG  L  L+ L +N N IV +P  +     L  LD   N L+ LP+ + +LI+L+ L
Sbjct: 79  PQAIG-SLKQLQHLDLNRNLIVNVPDEIKSCKHLTHLDLSCNSLQRLPDAVTSLISLQEL 137

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
            +++   YLE LP + G L++L  L++  N + TLP S+  L  LQ+L + GN     P 
Sbjct: 138 LLNET--YLEFLPANFGRLVNLRILELRLNNLITLPKSMVRLVNLQRLDIGGNEFTELPE 195

Query: 193 DVVE 196
            V E
Sbjct: 196 VVGE 199



 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 99/194 (51%), Gaps = 29/194 (14%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELN----------------- 63
           NQ++ +  +IG L +L+  + +GNLL+SLP  +   R++E L+                 
Sbjct: 211 NQIRRVSANIGKLRELQHFEANGNLLDSLPNELSQWRNVEVLSICSNNLEAFPFSVGMLK 270

Query: 64  ------ANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK 117
                    N L +LPD+I + L  L+ L ++ NK++ LP ++  L  LR L A  N L+
Sbjct: 271 SLVTFKCESNGLSELPDSISY-LEQLEELVLSHNKLMRLPSTIGMLKRLRFLFADDNQLR 329

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
            LP++L +   L VL+++ N   L  LP +IG L  L  L+V  N I  LP S+  L +L
Sbjct: 330 QLPDELCSCQQLSVLSVANN--QLSALPQNIGNLGKLRVLNVVNNYINALPVSMLSLVQL 387

Query: 178 QKLSLEGN---PLV 188
             L L  N   PLV
Sbjct: 388 TSLWLSDNQSQPLV 401


>gi|194753275|ref|XP_001958942.1| GF12306 [Drosophila ananassae]
 gi|190620240|gb|EDV35764.1| GF12306 [Drosophila ananassae]
          Length = 860

 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 112/177 (63%), Gaps = 3/177 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           VL V+SN L+ +P +IG L +L+ LD++ NL+ ++P  I++C+ L  L+ + N L++LPD
Sbjct: 68  VLHVNSNNLESIPQAIGSLRQLQHLDLNRNLIVTVPDEIKSCKHLTHLDLSCNSLQRLPD 127

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            I   LI+L+ L +N   +  LP +   L +LR+L+ RLN L +LP+ +  L+NL+ L+I
Sbjct: 128 AIT-SLISLQELLLNETYLEFLPANFGRLVNLRILELRLNNLITLPKSMVRLVNLQRLDI 186

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
             N ++ E LP  +G L SL EL + +N+I  +  +IG LR+LQ     GN L + P
Sbjct: 187 GGN-EFTE-LPEVVGELKSLKELWIDFNQIRRVSANIGKLRELQHFEANGNLLDTLP 241



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 115/193 (59%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+++T+ L+++  L ++   L+ LP + G L  L++L++  N L +LPK++    +L+ 
Sbjct: 125 LPDAITS-LISLQELLLNETYLEFLPANFGRLVNLRILELRLNNLITLPKSMVRLVNLQR 183

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+  +LP+ +G EL +LK L I+ N+I  +  ++  L  L+  +A  N L +LP 
Sbjct: 184 LDIGGNEFTELPEVVG-ELKSLKELWIDFNQIRRVSANIGKLRELQHFEANGNLLDTLPN 242

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L N  N+EVL+I  N   LE  P+S+G+L SLV      N +T LPDSI  L +L++L 
Sbjct: 243 ELSNWRNVEVLSICSN--NLEAFPFSVGMLKSLVTFKCESNGLTELPDSISYLEQLEELV 300

Query: 182 LEGNPLVSPPMDV 194
           L  N L+  P  +
Sbjct: 301 LSHNKLIRLPSTI 313



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/152 (38%), Positives = 81/152 (53%), Gaps = 3/152 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV VL + SN L+  P S+G L  L       N L  LP +I     LEEL  + NKL +
Sbjct: 249 NVEVLSICSNNLEAFPFSVGMLKSLVTFKCESNGLTELPDSISYLEQLEELVLSHNKLIR 308

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP TIG  L +L+ L  + N++  LP  L     L VL    N L +LP+++ NL  L V
Sbjct: 309 LPSTIGM-LRSLRFLFADDNQLRQLPDELCSCQQLSVLSVASNQLSALPQNIGNLAKLRV 367

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           LN+  N  Y+  LP S+  L++L  L +S N+
Sbjct: 368 LNVVNN--YINALPVSMLNLVNLTSLWLSDNQ 397



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 93/176 (52%), Gaps = 6/176 (3%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
            + + N L  LPN +     ++VL +  N LE+ P ++   +SL       N L +LPD+
Sbjct: 230 FEANGNLLDTLPNELSNWRNVEVLSICSNNLEAFPFSVGMLKSLVTFKCESNGLTELPDS 289

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           I + L  L+ L ++ NK++ LP ++  L SLR L A  N L+ LP++L +   L VL+++
Sbjct: 290 ISY-LEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQLRQLPDELCSCQQLSVLSVA 348

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN---PLV 188
            N   L  LP +IG L  L  L+V  N I  LP S+  L  L  L L  N   PLV
Sbjct: 349 SN--QLSALPQNIGNLAKLRVLNVVNNYINALPVSMLNLVNLTSLWLSDNQSQPLV 402



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 87/161 (54%), Gaps = 3/161 (1%)

Query: 36  LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           L+ L +S   L++LP  +  C+ L  L+ N N L  +P  IG  L  L+ L +N N IV 
Sbjct: 43  LEELYLSTTRLQTLPPQLFYCQGLRVLHVNSNNLESIPQAIG-SLRQLQHLDLNRNLIVT 101

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           +P  +     L  LD   N L+ LP+ + +LI+L+ L +++   YLE LP + G L++L 
Sbjct: 102 VPDEIKSCKHLTHLDLSCNSLQRLPDAITSLISLQELLLNET--YLEFLPANFGRLVNLR 159

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
            L++  N + TLP S+  L  LQ+L + GN     P  V E
Sbjct: 160 ILELRLNNLITLPKSMVRLVNLQRLDIGGNEFTELPEVVGE 200



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 56/141 (39%), Positives = 78/141 (55%), Gaps = 8/141 (5%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L ++V     SN L  LP+SI  L +L+ L +S N L  LP TI   RSL  L A+ N+L
Sbjct: 270 LKSLVTFKCESNGLTELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQL 329

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           RQLPD +      L  LS+  N++  LPQ++ +L  LRVL+   N + +LP  + NL+NL
Sbjct: 330 RQLPDELC-SCQQLSVLSVASNQLSALPQNIGNLAKLRVLNVVNNYINALPVSMLNLVNL 388

Query: 130 EVLNISQN-------FQYLET 143
             L +S N        QYL+ 
Sbjct: 389 TSLWLSDNQSQPLVPLQYLDA 409


>gi|449275631|gb|EMC84422.1| Leucine-rich repeat-containing protein 30 [Columba livia]
          Length = 298

 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/218 (36%), Positives = 123/218 (56%), Gaps = 13/218 (5%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP SL  +L  +VVL++  N LKCLP  IG L  LKVL  + N L+ +P  +  CR LE
Sbjct: 81  VIPPSL-GKLDRLVVLNLGGNCLKCLPKEIGLLRNLKVLFANMNCLKEVPSELSLCRKLE 139

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+ + N + QLP +   +L +L+ L+++ N  V +P  +  L SL  L    N L+++ 
Sbjct: 140 VLSLSHNCISQLPLSFT-DLTSLRKLNLSNNCFVQIPLCIFALRSLDFLHLGSNRLENIA 198

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E ++ L+NL++  +  N   + TLP S+  + +L  L+V YN I TLPD +  LR+L ++
Sbjct: 199 ESVQYLVNLQIFIVENN--NIRTLPRSLCFITTLELLNVDYNAIQTLPDDLYLLRRLPRI 256

Query: 181 S---------LEGNPLVSPPMDVVEQGLSAVKGYLSEK 209
           +         +  NPL  P  +VVE GL  +  YL EK
Sbjct: 257 AWNPMDKGLHIAHNPLSRPLPEVVEGGLDVLFNYLREK 294


>gi|421130081|ref|ZP_15590279.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410358680|gb|EKP05831.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 515

 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/200 (38%), Positives = 116/200 (58%), Gaps = 3/200 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + +NQL  LPN IG L KL+ L +S N L +LP  I   ++L+EL    N
Sbjct: 319 GQLQNLQSLYLGNNQLTALPNEIGQLQKLQELYLSTNRLTTLPNEIGQLQNLQELYLGSN 378

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+TL +  N++  L + +  L +L+ LD   N L + P+++E L 
Sbjct: 379 QLTILPNEIG-QLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLK 437

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+VL++  N   L TLP  IG L +L   +++ N++TTLP  IG L+ LQ+L L  N L
Sbjct: 438 NLQVLDLGSN--QLTTLPKEIGQLKNLQVFELNNNQLTTLPKEIGQLQNLQELYLIDNQL 495

Query: 188 VSPPMDVVEQGLSAVKGYLS 207
            S   + + + L   + Y  
Sbjct: 496 SSEEKERIRKLLPKCQIYFE 515



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 106/187 (56%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + +NQL  LPN IG L  L+ L +  N L +LP  I   + L+EL  + N
Sbjct: 296 GQLQNLQSLYLGNNQLTALPNEIGQLQNLQSLYLGNNQLTALPNEIGQLQKLQELYLSTN 355

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+ L +  N++ ILP  +  L +L+ L  R N L +L +D+E L 
Sbjct: 356 RLTTLPNEIG-QLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQ 414

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++  N   L T P  I  L +L  LD+  N++TTLP  IG L+ LQ   L  N L
Sbjct: 415 NLKSLDLWNN--QLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQL 472

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 473 TTLPKEI 479



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 109/186 (58%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L + SN+L  LPN IG L  L+VL+++ N  +++ K I   ++L+ LN  +N+
Sbjct: 228 KLENLKELYLGSNRLTTLPNEIGQLKNLRVLELTHNQFKTISKEIGQLKNLQTLNLGYNQ 287

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP+ IG +L NL++L +  N++  LP  +  L +L+ L    N L +LP ++  L  
Sbjct: 288 LTALPNEIG-QLQNLQSLYLGNNQLTALPNEIGQLQNLQSLYLGNNQLTALPNEIGQLQK 346

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S N   L TLP  IG L +L EL +  N++T LP+ IG L+ LQ L L  N L 
Sbjct: 347 LQELYLSTN--RLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLT 404

Query: 189 SPPMDV 194
           +   D+
Sbjct: 405 TLSKDI 410



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 104/184 (56%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++ +N+ K LP  IG L  L+ L+++ N L  LPK I   ++L +LN   N+  
Sbjct: 46  LDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFT 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  +  +L NLK L +  N++  LP  +  L +LRVL+   N  K++P+++  L NL+
Sbjct: 106 ILPKEVE-KLENLKELYLGSNRLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQ 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +  N   L  LP  IG + +L  L +  N++T LP  IG L+ L+KL+L  N     
Sbjct: 165 TLYLGNN--QLTALPNEIGQIQNLQFLYLGSNRLTILPKEIGQLKNLRKLNLYDNQFTIL 222

Query: 191 PMDV 194
           P +V
Sbjct: 223 PKEV 226



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 102/187 (54%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L+++ NQL  LP  IG L  L+ L++  N    LPK +E   +L+EL    N
Sbjct: 66  GKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+ L +  N+   +P+ +  L +L+ L    N L +LP ++  + 
Sbjct: 126 RLTTLPNEIG-QLKNLRVLELTHNQFKTIPKEIGQLKNLQTLYLGNNQLTALPNEIGQIQ 184

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +  N   L  LP  IG L +L +L++  N+ T LP  +  L  L++L L  N L
Sbjct: 185 NLQFLYLGSN--RLTILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNRL 242

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 243 TTLPNEI 249


>gi|398338577|ref|ZP_10523280.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
 gi|418675895|ref|ZP_13237181.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|400323660|gb|EJO71508.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
          Length = 281

 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 125/224 (55%), Gaps = 11/224 (4%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           ++V  LD+  NQL  LP  I  L +L+ LD+S N L +LPK I   + L  L  + N+L 
Sbjct: 37  MDVRTLDLSKNQLTTLPKEIEKLKELESLDLSNNQLVTLPKEIGKLQKLRYLYLDHNQLT 96

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  I + L +L++L +  N++  LP+ + +L  L  LD R N L +LP+++E L  L+
Sbjct: 97  TLPKEIEY-LKDLESLDLRNNQLTTLPKEIEYLKDLESLDLRNNQLTTLPKEIEYLKKLQ 155

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
           VL+++ N   L T+P  IG L  L EL +  N++TTLP  IG L +L  L L  N L + 
Sbjct: 156 VLDLNDN--QLTTIPKEIGYLKKLQELYLINNQLTTLPKEIGYLEELWLLDLRKNQLTTL 213

Query: 191 PMDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFN 233
           P ++ + Q L   K YL  K N     PK+   +GKL K  T N
Sbjct: 214 PKEIGKLQKLE--KLYL--KNNQFTTFPKE---IGKLQKLNTLN 250



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 94/193 (48%), Gaps = 26/193 (13%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+ +NQL  LP  I  L  L+ LD+  N L +LPK IE  + L+ L+ N N+L  +P  
Sbjct: 111 LDLRNNQLTTLPKEIEYLKDLESLDLRNNQLTTLPKEIEYLKKLQVLDLNDNQLTTIPKE 170

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG+ L  L+ L +  N++  LP+ + +L  L +LD R N L +LP++             
Sbjct: 171 IGY-LKKLQELYLINNQLTTLPKEIGYLEELWLLDLRKNQLTTLPKE------------- 216

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
                       IG L  L +L +  N+ TT P  IG L+KL  L+L+  P +      +
Sbjct: 217 ------------IGKLQKLEKLYLKNNQFTTFPKEIGKLQKLNTLNLDDIPALKSQEKKI 264

Query: 196 EQGLSAVKGYLSE 208
           ++ L     Y  E
Sbjct: 265 QKLLPKASIYFIE 277


>gi|421129287|ref|ZP_15589488.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410359483|gb|EKP06581.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 448

 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/187 (43%), Positives = 117/187 (62%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L ++ NQL  LPN IG L  L+VLD+  N L  LPK I   ++L+ LN  FN
Sbjct: 68  GKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LPD +G +L NL+ L+++ NK+ ILP+ +  L +L+VL+  LN L  LPE +  L 
Sbjct: 128 RLTILPDEVG-QLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLNLNKLTILPEKIGQLQ 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++LN SQ  Q L T P  IG L  L EL++ +N++TTL + +  L+ LQ L L  NPL
Sbjct: 187 NLQILN-SQGNQ-LTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPL 244

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 245 TTLPKEI 251



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 114/209 (54%), Gaps = 22/209 (10%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +LD+ SN L  LP  IG L KL+ L++ G  L++LP+ I   ++L  LN N+ 
Sbjct: 229 VQLQNLQILDLISNPLTTLPKEIGQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNYT 288

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP  IG +L  L+ L +  N++  LP+ +  L  L+ L    N L++LP+++E L 
Sbjct: 289 HLTILPKEIG-QLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQ 347

Query: 128 NLEVLNISQN---------------------FQYLETLPYSIGLLMSLVELDVSYNKITT 166
            L+ L +  N                     F  L TLP  IG L +L EL++ +N++ T
Sbjct: 348 KLQTLYLEGNQITTFPKEIGQLKNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQLAT 407

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
           LP  +G L+KL+KL+L  NP+ S  ++ +
Sbjct: 408 LPKEVGQLQKLRKLNLYNNPIASEKIERI 436



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/158 (39%), Positives = 102/158 (64%), Gaps = 3/158 (1%)

Query: 37  KVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVIL 96
           ++L++SG+ L +L K I   ++L++L  N+N+L  LP+ IG +L NL+ L +  N++ IL
Sbjct: 51  RILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIG-QLQNLQVLDLYSNELTIL 109

Query: 97  PQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVE 156
           P+ +  L +L+VL+   N L  LP+++  L NL+VLN+  N   L  LP  IG L +L  
Sbjct: 110 PKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLN--KLTILPEKIGQLQNLQV 167

Query: 157 LDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L+++ NK+T LP+ IG L+ LQ L+ +GN L + P ++
Sbjct: 168 LNLNLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEI 205



 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 3/115 (2%)

Query: 81  INLKTLSINCNK-IVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           +N ++++I  NK + IL   +     L+         ++L E L+N  +  +LN+S +  
Sbjct: 1   MNFQSINIRLNKRLTILLILICFSCKLQAQSKETQTYRNLTEALQNPKDARILNLSGS-- 58

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L TL   IG L +L +L ++YN++TTLP+ IG L+ LQ L L  N L   P ++
Sbjct: 59  KLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEI 113


>gi|398339753|ref|ZP_10524456.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
          Length = 448

 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/187 (43%), Positives = 117/187 (62%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L ++ NQL  LPN IG L  L+VLD+  N L  LPK I   ++L+ LN  FN
Sbjct: 68  GKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LPD +G +L NL+ L+++ NK+ ILP+ +  L +L+VL+  LN L  LPE +  L 
Sbjct: 128 RLTILPDEVG-QLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLNLNKLTILPEKIGQLQ 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++LN SQ  Q L T P  IG L  L EL++ +N++TTL + +  L+ LQ L L  NPL
Sbjct: 187 NLQILN-SQGNQ-LTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPL 244

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 245 TTLPKEI 251



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 114/209 (54%), Gaps = 22/209 (10%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +LD+ SN L  LP  IG L KL+ L++ G  L++LP+ I   ++L  LN N+ 
Sbjct: 229 VQLQNLQILDLISNPLTTLPKEIGQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNYT 288

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP  IG +L  L+ L +  N++  LP+ +  L  L+ L    N L++LP+++E L 
Sbjct: 289 HLTILPKEIG-QLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQ 347

Query: 128 NLEVLNISQN---------------------FQYLETLPYSIGLLMSLVELDVSYNKITT 166
            L+ L +  N                     F  L TLP  IG L +L EL++ +N++ T
Sbjct: 348 KLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQLAT 407

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
           LP  +G L+KL+KL+L  NP+ S  ++ +
Sbjct: 408 LPKEVGQLQKLRKLNLYNNPIASEKIERI 436



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/158 (39%), Positives = 102/158 (64%), Gaps = 3/158 (1%)

Query: 37  KVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVIL 96
           ++L++SG+ L +L K I   ++L++L  N+N+L  LP+ IG +L NL+ L +  N++ IL
Sbjct: 51  RILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIG-QLQNLQVLDLYSNELTIL 109

Query: 97  PQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVE 156
           P+ +  L +L+VL+   N L  LP+++  L NL+VLN+  N   L  LP  IG L +L  
Sbjct: 110 PKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLN--KLTILPEKIGQLQNLQV 167

Query: 157 LDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L+++ NK+T LP+ IG L+ LQ L+ +GN L + P ++
Sbjct: 168 LNLNLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEI 205



 Score = 46.6 bits (109), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 3/115 (2%)

Query: 81  INLKTLSINCNK-IVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           +N ++++I  NK + IL   +     L+         ++L E L+N  +  +LN+S +  
Sbjct: 1   MNFQSINIRLNKRLTILLILICFSCKLQAQSKETQTYRNLTEALQNPKDARILNLSGS-- 58

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L TL   IG L +L +L ++YN++TTLP+ IG L+ LQ L L  N L   P ++
Sbjct: 59  KLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEI 113


>gi|418755276|ref|ZP_13311483.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964287|gb|EKO32177.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 358

 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/179 (39%), Positives = 111/179 (62%), Gaps = 3/179 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L+++SNQ   LP  I  L KL+ L +  N L +LP+ I N ++L+ L+   N
Sbjct: 162 GNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTLPEEIWNLQNLKTLDLEGN 221

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG  L NL+TL +  N++  LP+ +  L +L+ L    N L +LP+++E+L 
Sbjct: 222 QLATLPEEIG-NLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTLPKEIEDLQ 280

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           NL++L++  N   L TLP  +G L +L EL +  N++TTLP  IG L+ L++L+L GNP
Sbjct: 281 NLKILSLGSN--QLATLPKEVGKLQNLQELYLYNNRLTTLPKEIGKLQNLKELNLGGNP 337



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/175 (37%), Positives = 102/175 (58%), Gaps = 3/175 (1%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
            N+L  LP  IG L  L+ L+++ N   +LPK I N + L++L+   N+L  LP+ I + 
Sbjct: 151 GNKLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTLPEEI-WN 209

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NLKTL +  N++  LP+ + +L +L+ LD   N L +LP+++  L NL+ L +  N  
Sbjct: 210 LQNLKTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNN-- 267

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L TLP  I  L +L  L +  N++ TLP  +G L+ LQ+L L  N L + P ++
Sbjct: 268 RLTTLPKEIEDLQNLKILSLGSNQLATLPKEVGKLQNLQELYLYNNRLTTLPKEI 322



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/153 (40%), Positives = 93/153 (60%), Gaps = 3/153 (1%)

Query: 42  SGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLT 101
            GN L +LPK I N ++L++LN N N+   LP  I + L  L+ LS+  N++  LP+ + 
Sbjct: 150 GGNKLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEI-WNLQKLQKLSLGRNQLTTLPEEIW 208

Query: 102 HLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSY 161
           +L +L+ LD   N L +LPE++ NL NL+ L++  N   L TLP  IG L +L +L +  
Sbjct: 209 NLQNLKTLDLEGNQLATLPEEIGNLQNLQTLDLEGN--QLTTLPKEIGKLQNLKKLYLYN 266

Query: 162 NKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           N++TTLP  I  L+ L+ LSL  N L + P +V
Sbjct: 267 NRLTTLPKEIEDLQNLKILSLGSNQLATLPKEV 299



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 79/136 (58%), Gaps = 2/136 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +   L N+  LD+  NQL  LP  IG L  L+ LD+ GN L +LPK I   ++L++
Sbjct: 203 LPEEI-WNLQNLKTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKK 261

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+L  LP  I  +L NLK LS+  N++  LP+ +  L +L+ L    N L +LP+
Sbjct: 262 LYLYNNRLTTLPKEIE-DLQNLKILSLGSNQLATLPKEVGKLQNLQELYLYNNRLTTLPK 320

Query: 122 DLENLINLEVLNISQN 137
           ++  L NL+ LN+  N
Sbjct: 321 EIGKLQNLKELNLGGN 336


>gi|418701717|ref|ZP_13262639.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759281|gb|EKR25496.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 379

 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 110/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L+++ NQL  LP  IG L  L+ L++S N ++++PK IE  + L+ L    N
Sbjct: 68  GKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQWLYLPKN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L  L+ L +  N++  LPQ +  L +L+ L+   N +K++P+++E L 
Sbjct: 128 QLTTLPQEIG-QLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQ 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L +  N   L TLP  IG L +L  LD+S N++TTLP  IG L+ LQ L L  N L
Sbjct: 187 KLQSLGLDNN--QLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQL 244

Query: 188 VSPPMDV 194
              P ++
Sbjct: 245 TILPNEI 251



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/226 (33%), Positives = 127/226 (56%), Gaps = 9/226 (3%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L N+  L++  NQ+K +P  I  L KL+ L +  N L +LP+ I   ++L+ 
Sbjct: 155 LPQEI-GQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQS 213

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L  LP  IG  L NL+ L +  N++ ILP  +  L +L+ L+ R N L +L +
Sbjct: 214 LDLSTNRLTTLPQEIGH-LQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSK 272

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++E L NL+ L++  N   L   P  IG L +L  LD+  N++TTLP+ IG L+ L+ L 
Sbjct: 273 EIEQLQNLKSLDLRSN--QLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLQNLKVLF 330

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
           L  N L + P ++       +K      +NN+  S ++K  + KL+
Sbjct: 331 LNNNQLTTLPKEI-----GQLKNLQELYLNNNQFSIEEKERIRKLL 371



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 85/268 (31%), Positives = 132/268 (49%), Gaps = 26/268 (9%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V  LD+ +N+ K LP  IG L  L+ L+++ N L  LPK I   ++L +LN + N+++
Sbjct: 48  LKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIK 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            +P  I  +L  L+ L +  N++  LPQ +  L  L+ L    N L +LP+++  L NL+
Sbjct: 108 TIPKEIE-KLQKLQWLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLK 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+S  +  ++T+P  I  L  L  L +  N++TTLP  IG L+ LQ L L  N L + 
Sbjct: 167 SLNLS--YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTL 224

Query: 191 PMDVVE----QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGALRNHR------ 240
           P ++      Q L  V   L+   N           +G+L    T N  LRN+R      
Sbjct: 225 PQEIGHLQNLQDLYLVSNQLTILPNE----------IGQLKNLQTLN--LRNNRLTTLSK 272

Query: 241 -SEERERFIMSDFRAIDGLASPRHIGMF 267
             E+ +     D R+      P+ IG  
Sbjct: 273 EIEQLQNLKSLDLRSNQLTIFPKEIGQL 300



 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R LD   N  K+LP+++  L NL+ LN+++N   L  LP  IG L +L 
Sbjct: 40  LAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKN--QLTILPKEIGQLKNLR 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +L++S N+I T+P  I  L+KLQ L L  N L + P ++
Sbjct: 98  KLNLSANQIKTIPKEIEKLQKLQWLYLPKNQLTTLPQEI 136


>gi|291240350|ref|XP_002740092.1| PREDICTED: PDZ-domain protein scribble-like [Saccoglossus
           kowalevskii]
          Length = 1630

 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 120/214 (56%), Gaps = 17/214 (7%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L+ +  LD+  N++  +P+SIG L  LK+L +  N L +LP  I   ++L+E+N + NK+
Sbjct: 208 LVELRTLDLSKNEIVEIPSSIGKLKSLKMLHIDRNKLTNLPIDIGKLKNLQEINMSMNKI 267

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
              P++IG  L+NL+ L+   N++  LP S  +L+ LR ++   N ++SLP  +  L +L
Sbjct: 268 LDFPESIGG-LVNLQFLNAKNNQLKCLPVSFVNLSKLREVNVSNNYIESLPRSIGKLKDL 326

Query: 130 EVLNISQNFQYLETLPYSIG--------------LLMSLVELDVSYNKITTLPDSIGCLR 175
           + L+IS N  +LE+LP SIG              +L  L  L +  N+I  LP  IG L 
Sbjct: 327 KYLDISHN--HLESLPPSIGECILVSKHVITCWKMLRELTSLKMMRNQIKVLPREIGYLS 384

Query: 176 KLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEK 209
            L  L ++ NP+  PPM +  +G+  ++ Y  +K
Sbjct: 385 SLSTLVIDDNPIREPPMVICNEGILGLQKYWQKK 418



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/188 (34%), Positives = 108/188 (57%), Gaps = 3/188 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++L+N+  LD+  N ++ +P +I  L  L+ LD+  N+L ++P  +     L +LN + N
Sbjct: 114 SKLVNLQKLDLSVNNIEEIPRTILNLCALQELDLHYNMLSTIPCEVGQLVHLTDLNLSQN 173

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L +LP T+G  L  L++L ++ NK++ +   +  L  LR LD   N +  +P  +  L 
Sbjct: 174 QLTELPITLG-NLKRLQSLRVSDNKLLSVSMEIGMLVELRTLDLSKNEIVEIPSSIGKLK 232

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L++L+I +N   L  LP  IG L +L E+++S NKI   P+SIG L  LQ L+ + N L
Sbjct: 233 SLKMLHIDRN--KLTNLPIDIGKLKNLQEINMSMNKILDFPESIGGLVNLQFLNAKNNQL 290

Query: 188 VSPPMDVV 195
              P+  V
Sbjct: 291 KCLPVSFV 298



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 113/224 (50%), Gaps = 39/224 (17%)

Query: 3   PESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEEL 62
           PES+   L+N+  L+  +NQLKCLP S   LSKL+ ++VS N +ESLP++I   + L+ L
Sbjct: 271 PESIGG-LVNLQFLNAKNNQLKCLPVSFVNLSKLREVNVSNNYIESLPRSIGKLKDLKYL 329

Query: 63  NANFNKLRQLPDTIGFELINLKTLSINC--------------NKIVILPQSLTHLTSLRV 108
           + + N L  LP +IG E I +    I C              N+I +LP+ + +L+SL  
Sbjct: 330 DISHNHLESLPPSIG-ECILVSKHVITCWKMLRELTSLKMMRNQIKVLPREIGYLSSLST 388

Query: 109 LDARLNCLKSLP-----------------EDLENLINL----EVLNISQNFQYLETLPYS 147
           L    N ++  P                 +D E L N+    E +++ QN   L  +P S
Sbjct: 389 LVIDDNPIREPPMVICNEGILGLQKYWQKKDQELLKNVKPNSEKVSLKQN--DLTYIPKS 446

Query: 148 IGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           I     + +LD+S NK++ LP  +  L +L+ L +  N L+  P
Sbjct: 447 ISQYTHIQQLDLSRNKLSYLPLEMCQLTQLENLDISNNNLIDLP 490



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 101/174 (58%), Gaps = 4/174 (2%)

Query: 22  QLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELI 81
           +L  LP SI      + L++  N   +LP  I + + L ELN + N +  +P ++ ++L 
Sbjct: 35  KLASLPPSIAEYKDCERLNLRCNSFSTLPPEISHLKKLNELNLSENCIENIPMSL-YKLT 93

Query: 82  NLKTLSINCNKIV-ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            L  L++N N+I+  L   ++ L +L+ LD  +N ++ +P  + NL  L+ L++  N   
Sbjct: 94  ALTVLNMNGNEIIGKLQPDISKLVNLQKLDLSVNNIEEIPRTILNLCALQELDLHYNM-- 151

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L T+P  +G L+ L +L++S N++T LP ++G L++LQ L +  N L+S  M++
Sbjct: 152 LSTIPCEVGQLVHLTDLNLSQNQLTELPITLGNLKRLQSLRVSDNKLLSVSMEI 205



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 94/181 (51%), Gaps = 26/181 (14%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L++  N ++ +P  I  L +L ++DV  N + S+PK I           N N+L++    
Sbjct: 564 LNLSCNNIEEIPPGICNLQRLAIIDVCENKIRSIPKEI----------GNMNRLKE---- 609

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
                     L I+ NKI  +P+ L  L  L +LD R N LK LP     L  L++L +S
Sbjct: 610 ----------LHISNNKIGNIPEPLCKLRELTLLDIRNNNLKELPPQFGELHELQILQLS 659

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            N       P +I  L  LV+L +S N +T++P +IG L+ L+++S++GN +   P +++
Sbjct: 660 GNV--FNEFPPAISKLTKLVKLYLSGNNMTSIPSTIGRLKSLEEMSIDGNIITELPAELL 717

Query: 196 E 196
           E
Sbjct: 718 E 718



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 24/204 (11%)

Query: 8    ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             R   +  L++ SN L  LP  +  L+ L+ L+++ N  E+ P  + +  +L  LN N N
Sbjct: 831  GRFAELKKLNLKSNHLDTLPEEVSNLTSLESLNLADNSFENYPSVLSHLENLVTLNLNHN 890

Query: 68   KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTH-----------------LTSLRVLD 110
            KL      +   L+N+K L  + N +V +P +++                  L SL+VL 
Sbjct: 891  KLT----AMHISLVNIKELDASHNNLVAIPNTVSQASQLTNKINDDPSITLDLKSLKVLR 946

Query: 111  ARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDS 170
               N L S+P  +++L+ L VL+IS N   L+ +P  I +L +L EL +S N+I T+P  
Sbjct: 947  LTHNKLTSIPS-VDSLLELTVLDISDN--KLQKIPKQIRILKNLKELYLSNNEIKTVPCE 1003

Query: 171  IGCLRKLQKLSLEGNPLVSPPMDV 194
            I  L +L +L +  N L   P ++
Sbjct: 1004 ITHLTELHELDISNNELEHLPPEI 1027



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 24/197 (12%)

Query: 16   LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
            +D  +  L+ LP  IG  ++LK L++  N L++LP+ + N  SLE LN   N     P  
Sbjct: 816  IDFANRDLQKLPGVIGRFAELKKLNLKSNHLDTLPEEVSNLTSLESLNLADNSFENYPSV 875

Query: 76   IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP------EDLENLIN- 128
            +   L NL TL++N NK+  +  S   L +++ LDA  N L ++P        L N IN 
Sbjct: 876  LS-HLENLVTLNLNHNKLTAMHIS---LVNIKELDASHNNLVAIPNTVSQASQLTNKIND 931

Query: 129  ----------LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQ 178
                      L+VL ++ N   L ++P S+  L+ L  LD+S NK+  +P  I  L+ L+
Sbjct: 932  DPSITLDLKSLKVLRLTHN--KLTSIP-SVDSLLELTVLDISDNKLQKIPKQIRILKNLK 988

Query: 179  KLSLEGNPLVSPPMDVV 195
            +L L  N + + P ++ 
Sbjct: 989  ELYLSNNEIKTVPCEIT 1005



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 102/190 (53%), Gaps = 11/190 (5%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+S+ ++  ++  LD+  N+L  LP  +  L++L+ LD+S N L  LP +  +   L+ 
Sbjct: 443 IPKSI-SQYTHIQQLDLSRNKLSYLPLEMCQLTQLENLDISNNNLIDLPGSFSD---LKI 498

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L + PD    E I    +S NC + + +  +L+ LT + + D +L   K+ P 
Sbjct: 499 LNLSRNNLTEFPD--NLENIQQIDISQNCLQNIHIGMNLSKLTHVNMRDTKL---KNFPL 553

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L +   L  LN+S N   +E +P  I  L  L  +DV  NKI ++P  IG + +L++L 
Sbjct: 554 QLCSASELYHLNLSCN--NIEEIPPGICNLQRLAIIDVCENKIRSIPKEIGNMNRLKELH 611

Query: 182 LEGNPLVSPP 191
           +  N + + P
Sbjct: 612 ISNNKIGNIP 621



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 71/118 (60%), Gaps = 2/118 (1%)

Query: 10   LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
            LL + VLD+  N+L+ +P  I  L  LK L +S N ++++P  I +   L EL+ + N+L
Sbjct: 961  LLELTVLDISDNKLQKIPKQIRILKNLKELYLSNNEIKTVPCEITHLTELHELDISNNEL 1020

Query: 70   RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLN-CLKSLPEDLENL 126
              LP  I   + NL++L I  N+++ LP+++ H+ +L+ +DA  N  ++  P D+ +L
Sbjct: 1021 EHLPPEID-NMTNLQSLYIQRNRLMELPRTIVHIDNLKYIDASGNSSMREPPADVCDL 1077



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 92/171 (53%), Gaps = 5/171 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L  + ++DV  N+++ +P  IG +++LK L +S N + ++P+ +   R L  L+   N L
Sbjct: 581 LQRLAIIDVCENKIRSIPKEIGNMNRLKELHISNNKIGNIPEPLCKLRELTLLDIRNNNL 640

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           ++LP   G EL  L+ L ++ N     P +++ LT L  L    N + S+P  +  L +L
Sbjct: 641 KELPPQFG-ELHELQILQLSGNVFNEFPPAISKLTKLVKLYLSGNNMTSIPSTIGRLKSL 699

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITT-LPDSIGCLRKLQK 179
           E ++I  N   +  LP  + L + +++L +  N+  T L D +  L +L++
Sbjct: 700 EEMSIDGNI--ITELPAEL-LELQIIKLQLIENQQDTPLKDFVAELSRLKQ 747



 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 2/107 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE L  +L  + +LD+ +N LK LP   G L +L++L +SGN+    P  I     L +
Sbjct: 620 IPEPL-CKLRELTLLDIRNNNLKELPPQFGELHELQILQLSGNVFNEFPPAISKLTKLVK 678

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRV 108
           L  + N +  +P TIG  L +L+ +SI+ N I  LP  L  L  +++
Sbjct: 679 LYLSGNNMTSIPSTIG-RLKSLEEMSIDGNIITELPAELLELQIIKL 724



 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 26/133 (19%)

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           +S+   K+  LP S+        L+ R N   +LP ++ +L  L  LN+S+N   +E +P
Sbjct: 29  ISLQFMKLASLPPSIAEYKDCERLNLRCNSFSTLPPEISHLKKLNELNLSENC--IENIP 86

Query: 146 YS------------------------IGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            S                        I  L++L +LD+S N I  +P +I  L  LQ+L 
Sbjct: 87  MSLYKLTALTVLNMNGNEIIGKLQPDISKLVNLQKLDLSVNNIEEIPRTILNLCALQELD 146

Query: 182 LEGNPLVSPPMDV 194
           L  N L + P +V
Sbjct: 147 LHYNMLSTIPCEV 159


>gi|421117624|ref|ZP_15577983.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410010838|gb|EKO68970.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
          Length = 377

 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 110/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L+++ NQL  LP  IG L  L+ L++S N ++++PK IE  + L+ L    N
Sbjct: 66  GKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L  L+ L +  N++  LPQ +  L +L+ L+   N +K++P+++E L 
Sbjct: 126 QLTTLPQEIG-QLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQ 184

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L +  N   L TLP  IG L +L  LD+S N++TTLP  IG L+ LQ L L  N L
Sbjct: 185 KLQSLGLDNN--QLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQL 242

Query: 188 VSPPMDV 194
              P ++
Sbjct: 243 TILPNEI 249



 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 131/227 (57%), Gaps = 11/227 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L N+  L++  NQ+K +P  I  L KL+ L +  N L +LP+ I   ++L+ 
Sbjct: 153 LPQEI-GQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQS 211

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L  LP  IG  L NL+ L +  N++ ILP  +  L +L+ L+ R N L +L +
Sbjct: 212 LDLSTNRLTTLPQEIGH-LQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSK 270

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++E L NL+ L++  N   L T P  IG L +L  L++  N++TTLP+ IG L+ LQ L 
Sbjct: 271 EIEQLQNLKSLDLRSN--QLTTFPKEIGQLKNLQTLNLGSNQLTTLPEGIGQLKNLQTLD 328

Query: 182 LEGNPLVSPPMDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
           L+ N L + P ++ + Q L  +       +NN+  S ++K  + KL+
Sbjct: 329 LDSNQLTTLPQEIGQLQNLQEL------FLNNNQLSSQEKKRIRKLL 369



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/268 (31%), Positives = 134/268 (50%), Gaps = 26/268 (9%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V +LD+ +N+ K LP  IG L  L+ L+++ N L  LPK I   ++L +LN + N+++
Sbjct: 46  LKVRILDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIK 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            +P  I  +L  L++L +  N++  LPQ +  L  L+ L    N L +LP+++  L NL+
Sbjct: 106 TIPKEIE-KLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLK 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+S  +  ++T+P  I  L  L  L +  N++TTLP  IG L+ LQ L L  N L + 
Sbjct: 165 SLNLS--YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTL 222

Query: 191 PMDVVE----QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGALRNHR------ 240
           P ++      Q L  V   L+   N           +G+L    T N  LRN+R      
Sbjct: 223 PQEIGHLQNLQDLYLVSNQLTILPNE----------IGQLKNLQTLN--LRNNRLTTLSK 270

Query: 241 -SEERERFIMSDFRAIDGLASPRHIGMF 267
             E+ +     D R+      P+ IG  
Sbjct: 271 EIEQLQNLKSLDLRSNQLTTFPKEIGQL 298



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 61/99 (61%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R+LD   N  K+LP+++  L NL+ LN+++N   L  LP  IG L +L 
Sbjct: 38  LTKALQNPLKVRILDLSANRFKTLPKEIGKLKNLQELNLNKN--QLTILPKEIGQLKNLR 95

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +L++S N+I T+P  I  L+KLQ L L  N L + P ++
Sbjct: 96  KLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEI 134


>gi|456875008|gb|EMF90242.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 557

 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/193 (37%), Positives = 112/193 (58%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L  +  L + +NQLK LP  IG L  LK L +  N LES PK I    +L+ 
Sbjct: 283 LPQEI-GKLQRLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLPNLQR 341

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+  +N+   LP  IG  L  L  L++  N++  LPQ +  L  L  L+   N L +LP+
Sbjct: 342 LHLEYNRFTTLPQEIG-TLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPK 400

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L  L+ L ++ N   L TLP  IG L +L +LD+ YN++ TLP++IG L++L+ LS
Sbjct: 401 EIGTLQKLQHLYLANN--QLATLPKEIGQLQNLKDLDLEYNQLATLPEAIGTLQRLEWLS 458

Query: 182 LEGNPLVSPPMDV 194
           L+ N L + P ++
Sbjct: 459 LKNNQLTTLPEEI 471



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/206 (37%), Positives = 113/206 (54%), Gaps = 22/206 (10%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+  L + +NQLK LP  I  L KLK L +S N L +LPK I   + LE L    N+L
Sbjct: 60  LQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLATLPKEIGKLQRLERLYLGGNQL 119

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             +P  IG  L +L+ LS+  N+++ LPQ +  L  L  L+   N L++LP+++  L +L
Sbjct: 120 TTIPQEIG-ALQDLEELSLYNNQLITLPQEIGTLQDLEELNLANNQLRTLPKEIGTLQHL 178

Query: 130 EVLNIS--------------QNFQYLE-------TLPYSIGLLMSLVELDVSYNKITTLP 168
           + LN+               QN +YL        TLP  IG L +L +L+V  N++ TLP
Sbjct: 179 QDLNVFNNQLITLPQEIGTLQNLKYLRLAYNQLTTLPEEIGRLENLQDLNVFNNQLVTLP 238

Query: 169 DSIGCLRKLQKLSLEGNPLVSPPMDV 194
             IG L+ LQ L+LE N LV+ P ++
Sbjct: 239 QEIGTLQNLQSLNLENNRLVTLPKEI 264



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 102/184 (55%), Gaps = 3/184 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L +  N+   LP  IG L +L  L++  N L +LP+ I     LE LN   N+L  
Sbjct: 338 NLQRLHLEYNRFTTLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLAT 397

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG  L  L+ L +  N++  LP+ +  L +L+ LD   N L +LPE +  L  LE 
Sbjct: 398 LPKEIG-TLQKLQHLYLANNQLATLPKEIGQLQNLKDLDLEYNQLATLPEAIGTLQRLEW 456

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L++  N   L TLP  IG L  +V+L+++ N++ TLP  IG L+ L+ L L GNP  + P
Sbjct: 457 LSLKNN--QLTTLPEEIGTLQKIVKLNLANNQLRTLPQGIGQLQSLKDLDLSGNPFTTFP 514

Query: 192 MDVV 195
            ++V
Sbjct: 515 KEIV 518



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 102/185 (55%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+  L +  NQL  LP  IG L  L+ L+V  N L +LP+ I   ++L+ LN   N+L
Sbjct: 198 LQNLKYLRLAYNQLTTLPEEIGRLENLQDLNVFNNQLVTLPQEIGTLQNLQSLNLENNRL 257

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  IG  L  L+ L +  N++  LPQ +  L  L  L    N LKSLP+++  L NL
Sbjct: 258 VTLPKEIG-ALQKLEWLYLTNNQLATLPQEIGKLQRLEWLGLTNNQLKSLPQEIGKLQNL 316

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           + L +  N   LE+ P  IG L +L  L + YN+ TTLP  IG L +L  L+LE N L +
Sbjct: 317 KELILENN--RLESFPKEIGTLPNLQRLHLEYNRFTTLPQEIGTLHRLPWLNLEHNQLTT 374

Query: 190 PPMDV 194
            P ++
Sbjct: 375 LPQEI 379



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 105/184 (57%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           ++V  LD+ +NQL   P  IG L  LK L ++ N L++LPK IE  + L+ L  + N+L 
Sbjct: 38  MDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLA 97

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG +L  L+ L +  N++  +PQ +  L  L  L    N L +LP+++  L +LE
Sbjct: 98  TLPKEIG-KLQRLERLYLGGNQLTTIPQEIGALQDLEELSLYNNQLITLPQEIGTLQDLE 156

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN++ N   L TLP  IG L  L +L+V  N++ TLP  IG L+ L+ L L  N L + 
Sbjct: 157 ELNLANN--QLRTLPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLKYLRLAYNQLTTL 214

Query: 191 PMDV 194
           P ++
Sbjct: 215 PEEI 218



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 110/193 (56%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  RL N+  L+V +NQL  LP  IG L  L+ L++  N L +LPK I   + LE 
Sbjct: 214 LPEEI-GRLENLQDLNVFNNQLVTLPQEIGTLQNLQSLNLENNRLVTLPKEIGALQKLEW 272

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+L  LP  IG +L  L+ L +  N++  LPQ +  L +L+ L    N L+S P+
Sbjct: 273 LYLTNNQLATLPQEIG-KLQRLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPK 331

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L NL+ L++  N     TLP  IG L  L  L++ +N++TTLP  IG L +L+ L+
Sbjct: 332 EIGTLPNLQRLHLEYN--RFTTLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLN 389

Query: 182 LEGNPLVSPPMDV 194
           L  N L + P ++
Sbjct: 390 LYNNRLATLPKEI 402



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/188 (37%), Positives = 103/188 (54%), Gaps = 3/188 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L++  NQL  LP  IG L +L+ L++  N L +LPK I   + L+ L    N+L  LP  
Sbjct: 365 LNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANNQLATLPKE 424

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NLK L +  N++  LP+++  L  L  L  + N L +LPE++  L  +  LN++
Sbjct: 425 IG-QLQNLKDLDLEYNQLATLPEAIGTLQRLEWLSLKNNQLTTLPEEIGTLQKIVKLNLA 483

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            N   L TLP  IG L SL +LD+S N  TT P  I  L+ LQ L L+  P +    + +
Sbjct: 484 NN--QLRTLPQGIGQLQSLKDLDLSGNPFTTFPKEIVGLKHLQILKLKNIPALLSERETI 541

Query: 196 EQGLSAVK 203
            + L  VK
Sbjct: 542 RKLLPDVK 549



 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 63/113 (55%), Gaps = 6/113 (5%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQL  LP +IG L +L+ L +  N L +LP+ I   + + +LN   N
Sbjct: 426 GQLQNLKDLDLEYNQLATLPEAIGTLQRLEWLSLKNNQLTTLPEEIGTLQKIVKLNLANN 485

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +LR LP  IG +L +LK L ++ N     P+ +  L  L++L      LK++P
Sbjct: 486 QLRTLPQGIG-QLQSLKDLDLSGNPFTTFPKEIVGLKHLQILK-----LKNIP 532


>gi|421127271|ref|ZP_15587495.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421136024|ref|ZP_15596135.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019758|gb|EKO86572.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410435361|gb|EKP84493.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 659

 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  N L  LP  IG L  L+ LD+S N L +LPK +    +L+ LN N  
Sbjct: 68  GQLQNLQRLDLSFNSLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQ 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  LP  IG +L NL+ L +  N++  LP+ +  L +L+VL    N L +LP ++  L 
Sbjct: 128 KLTTLPKEIG-QLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLK 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L++  N   L  LP  IG L +L EL +SYN++T LP  IG L  LQ+L+L    L
Sbjct: 187 NLQMLDLGNN--QLTILPKEIGQLQNLQELYLSYNQLTILPKEIGQLENLQRLNLNSQKL 244

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 245 TTLPKEI 251



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/207 (37%), Positives = 114/207 (55%), Gaps = 22/207 (10%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  LD+H NQL  LP  IG L  LK L++    L +LPK I   ++L+ LN    +
Sbjct: 322 QLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIVTQ 381

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG EL NLKTL++   ++  LP+ +  L +L+ L+   N L +LP+++  L N
Sbjct: 382 LTTLPKEIG-ELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQN 440

Query: 129 LEVLNIS--------------QNFQYL-------ETLPYSIGLLMSLVELDVSYNKITTL 167
           LE+L +               QN Q+L        TLP  IG L +L  LD+  N++TTL
Sbjct: 441 LEILVLRENRITALPKEIGQLQNLQWLGLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTL 500

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P  IG L+ LQ+L L+ N L + P ++
Sbjct: 501 PKEIGQLQNLQELCLDENQLTTLPKEI 527



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 113/187 (60%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+H N+L  LP  IG L  L+ LD++ N L +LPK I   R+L+EL+ + N
Sbjct: 275 GQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRN 334

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NLKTL++   ++  LP+ +  L +L+ L+  +  L +LP+++  L 
Sbjct: 335 QLTTLPKEIG-QLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQ 393

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+      L TLP  IG L +L  L++  N++TTLP  IG L+ L+ L L  N +
Sbjct: 394 NLKTLNLI--VTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRI 451

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 452 TALPKEI 458



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 74/184 (40%), Positives = 109/184 (59%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V  LD+   +L  LP  IG L  L+ LD+S N L +LPK I   R+L+EL+ +FN L 
Sbjct: 48  LKVRTLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTTLPKEIGQLRNLQELDLSFNSLT 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  +G +L NL+ L++N  K+  LP+ +  L +L++L    N L +LP+++  L NL+
Sbjct: 108 TLPKEVG-QLENLQRLNLNSQKLTTLPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLK 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
           VL ++ N   L TLP  I  L +L  LD+  N++T LP  IG L+ LQ+L L  N L   
Sbjct: 167 VLFLNNN--QLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTIL 224

Query: 191 PMDV 194
           P ++
Sbjct: 225 PKEI 228



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/182 (41%), Positives = 107/182 (58%), Gaps = 3/182 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +H NQL  LP  IG L  L+ LD+  N L +LPK I   ++L+EL  + N
Sbjct: 459 GQLQNLQWLGLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDEN 518

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L ++ N++  LP+ +  L SL+VL    N L +LP+++  L 
Sbjct: 519 QLTTLPKEIE-QLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQ 577

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+VL +  N   L TLP  IG L +L EL +  N++TT P  I  L+ LQ+L L  NPL
Sbjct: 578 NLQVLGLISN--QLMTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPL 635

Query: 188 VS 189
            S
Sbjct: 636 SS 637



 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 111/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L+++S +L  LP  IG L  L++L +  N L +LPK I   ++L+ L  N N
Sbjct: 114 GQLENLQRLNLNSQKLTTLPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNN 173

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L +  N++ ILP+ +  L +L+ L    N L  LP+++  L 
Sbjct: 174 QLTTLPTEIR-QLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTILPKEIGQLE 232

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+  N Q L TLP  IG L +L  LD+S+N +TTLP  +G L  LQ+L L  N L
Sbjct: 233 NLQRLNL--NSQKLTTLPKEIGQLRNLQWLDLSFNSLTTLPKEVGQLENLQRLDLHQNRL 290

Query: 188 VSPPMDV 194
            + PM++
Sbjct: 291 ATLPMEI 297



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 110/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+ +L +  N++  LP  IG L  L+ L +  N L +LPK I   ++L+ L+ + N
Sbjct: 436 GELQNLEILVLRENRITALPKEIGQLQNLQWLGLHQNQLTTLPKEIGQLQNLQRLDLHQN 495

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L ++ N++  LP+ +  L +LRVLD   N L +LP+++  L 
Sbjct: 496 QLTTLPKEIG-QLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQ 554

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+VL +  N   L TLP  IG L +L  L +  N++ TLP  IG L+ LQ+L L+ N L
Sbjct: 555 SLQVLALGSN--RLSTLPKEIGQLQNLQVLGLISNQLMTLPKEIGQLQNLQELCLDENQL 612

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 613 TTFPKEI 619



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 111/189 (58%), Gaps = 3/189 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L+++S +L  LP  IG L  L+ LD+S N L +LPK +    +L+ L+ + N
Sbjct: 229 GQLENLQRLNLNSQKLTTLPKEIGQLRNLQWLDLSFNSLTTLPKEVGQLENLQRLDLHQN 288

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +N NK+  LP+ +  L +L+ LD   N L +LP+++  L 
Sbjct: 289 RLATLPMEIG-QLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQ 347

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+      L TLP  IG L +L  L++   ++TTLP  IG L+ L+ L+L    L
Sbjct: 348 NLKTLNLI--VTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIVTQL 405

Query: 188 VSPPMDVVE 196
            + P ++ E
Sbjct: 406 TTLPKEIGE 414



 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/188 (38%), Positives = 107/188 (56%), Gaps = 3/188 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L++   QL  LP  IG L  LK L++    L +LPK I   ++L+ LN   N
Sbjct: 367 GELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDN 426

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG EL NL+ L +  N+I  LP+ +  L +L+ L    N L +LP+++  L 
Sbjct: 427 QLTTLPKEIG-ELQNLEILVLRENRITALPKEIGQLQNLQWLGLHQNQLTTLPKEIGQLQ 485

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++ QN   L TLP  IG L +L EL +  N++TTLP  I  L+ L+ L L+ N L
Sbjct: 486 NLQRLDLHQN--QLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQL 543

Query: 188 VSPPMDVV 195
            + P +V+
Sbjct: 544 TTLPKEVL 551



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 109/189 (57%), Gaps = 3/189 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  N L  LP  +G L  L+ LD+  N L +LP  I   ++L+EL+ N N
Sbjct: 252 GQLRNLQWLDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSN 311

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  LP  I  +L NL+ L ++ N++  LP+ +  L +L+ L+  +  L +LP+++  L 
Sbjct: 312 KLTTLPKEIR-QLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQ 370

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+      L TLP  IG L +L  L++   ++TTLP  IG L+ L+ L+L  N L
Sbjct: 371 NLKTLNLI--VTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQL 428

Query: 188 VSPPMDVVE 196
            + P ++ E
Sbjct: 429 TTLPKEIGE 437


>gi|455791562|gb|EMF43369.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 380

 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 126/226 (55%), Gaps = 9/226 (3%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L N+  L++  NQ+K +P  I  L KL+ L +  N L +LPK IE  ++L+ 
Sbjct: 156 LPQEI-GQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPKEIEQLKNLQT 214

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+L   P  I  +L NL+ L +  N++ +LPQ +  L +L++LD   N LK+LP+
Sbjct: 215 LYLGNNRLTTFPKEIE-QLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLKTLPK 273

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++E L NL+ LN+  N   L  LP  I  L +L  L + YN++T LP  IG L+ L+ L 
Sbjct: 274 EIEQLKNLQELNLGYN--QLTVLPKEIEQLKNLQTLYLGYNQLTVLPKEIGQLQNLKVLF 331

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
           L  N L + P ++       +K      +NN+  S ++K  + KL+
Sbjct: 332 LNNNQLTTLPKEI-----GQLKNLQELYLNNNQLSIEEKERIQKLI 372



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/175 (38%), Positives = 104/175 (59%), Gaps = 3/175 (1%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
            NQL  LP  IG L  LK L++S N ++++PK IE  + L+ L  + N+L  LP  I  +
Sbjct: 150 KNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPKEIE-Q 208

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+TL +  N++   P+ +  L +L++L    N L  LP++++ L NL++L++S N  
Sbjct: 209 LKNLQTLYLGNNRLTTFPKEIEQLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYN-- 266

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L+TLP  I  L +L EL++ YN++T LP  I  L+ LQ L L  N L   P ++
Sbjct: 267 QLKTLPKEIEQLKNLQELNLGYNQLTVLPKEIEQLKNLQTLYLGYNQLTVLPKEI 321



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 105/187 (56%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L+++ NQL  LP  IG L  L+ L++S N ++++PK IE  + L+ L    N
Sbjct: 69  GKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPKN 128

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L  L+ L +  N++  LPQ +  L +L+ L+   N +K++P+++E L 
Sbjct: 129 QLTTLPQEIG-QLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQ 187

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L +  N   L TLP  I  L +L  L +  N++TT P  I  L+ LQ L L  N L
Sbjct: 188 KLQSLGLDNN--QLTTLPKEIEQLKNLQTLYLGNNRLTTFPKEIEQLKNLQLLYLYDNQL 245

Query: 188 VSPPMDV 194
              P ++
Sbjct: 246 TVLPQEI 252



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 105/184 (57%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V  LD+ +N+ K LP  IG L  L+ L+++ N L  LPK I   ++L +LN + N+++
Sbjct: 49  LKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIK 108

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            +P  I  +L  L++L +  N++  LPQ +  L  L+ L    N L +LP+++  L NL+
Sbjct: 109 TIPKEIE-KLQKLQSLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLK 167

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+S N   ++T+P  I  L  L  L +  N++TTLP  I  L+ LQ L L  N L + 
Sbjct: 168 SLNLSYN--QIKTIPKEIEKLQKLQSLGLDNNQLTTLPKEIEQLKNLQTLYLGNNRLTTF 225

Query: 191 PMDV 194
           P ++
Sbjct: 226 PKEI 229



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R LD   N  K+LP+++  L NL+ LN+++N   L  LP  IG L +L 
Sbjct: 41  LTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKN--QLTILPKEIGQLKNLR 98

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +L++S N+I T+P  I  L+KLQ L L  N L + P ++
Sbjct: 99  KLNLSANQIKTIPKEIEKLQKLQSLYLPKNQLTTLPQEI 137


>gi|195583540|ref|XP_002081575.1| GD11090 [Drosophila simulans]
 gi|194193584|gb|EDX07160.1| GD11090 [Drosophila simulans]
          Length = 776

 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/180 (38%), Positives = 112/180 (62%), Gaps = 7/180 (3%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           VL V+SN L+ +P +IG L +L+ LD++ NL+ ++P+ I++C+ L  L+ + N L++LPD
Sbjct: 67  VLHVNSNNLESIPQAIGSLRQLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPD 126

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            I   LI+L+ L +N   +  LP +   L +LR+L+ RLN L +LP+ +  LINL+ L+I
Sbjct: 127 AIT-SLISLQELLLNETYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQRLDI 185

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N ++ E     +G+L SLV      N +T LPDSI  L +L++L L  N L+  P  +
Sbjct: 186 GGN-EFTE-----LGMLKSLVTFKCESNGLTELPDSISYLEQLEELVLSHNKLIRLPSTI 239



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 97/184 (52%), Gaps = 10/184 (5%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL+N+ +L++  N L  LP S+  L  L+ LD+ GN    L       +SL       N
Sbjct: 152 GRLVNLRILELRLNNLMTLPKSMVRLINLQRLDIGGNEFTELGM----LKSLVTFKCESN 207

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L +LPD+I + L  L+ L ++ NK++ LP ++  L SLR L A  N L+ LP++L +  
Sbjct: 208 GLTELPDSISY-LEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQLRQLPDELCSCQ 266

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN-- 185
            L VL+++ N   L  LP +IG L  +  L+V  N I  LP S+  L  L  + L  N  
Sbjct: 267 QLSVLSVANN--QLSALPQNIGNLSKMKVLNVVNNYINALPVSMLNLVNLTSMWLSDNQS 324

Query: 186 -PLV 188
            PLV
Sbjct: 325 QPLV 328



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 79/141 (56%), Gaps = 8/141 (5%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L ++V     SN L  LP+SI  L +L+ L +S N L  LP TI   RSL  L A+ N+L
Sbjct: 196 LKSLVTFKCESNGLTELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQL 255

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           RQLPD +      L  LS+  N++  LPQ++ +L+ ++VL+   N + +LP  + NL+NL
Sbjct: 256 RQLPDELC-SCQQLSVLSVANNQLSALPQNIGNLSKMKVLNVVNNYINALPVSMLNLVNL 314

Query: 130 EVLNISQN-------FQYLET 143
             + +S N        QYL+ 
Sbjct: 315 TSMWLSDNQSQPLVPLQYLDA 335



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 26/144 (18%)

Query: 39  LDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ 98
           LD S   L   P+  ++ R+LEEL  +  +L+ LP                       PQ
Sbjct: 22  LDYSNTPLTDFPEVWQHERTLEELYLSTTRLQALP-----------------------PQ 58

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
            L +   LRVL    N L+S+P+ + +L  L+ L++++N   +  +P  I     L  LD
Sbjct: 59  -LFYCQGLRVLHVNSNNLESIPQAIGSLRQLQHLDLNRNL--IVNVPEEIKSCKHLTHLD 115

Query: 159 VSYNKITTLPDSIGCLRKLQKLSL 182
           +S N +  LPD+I  L  LQ+L L
Sbjct: 116 LSCNSLQRLPDAITSLISLQELLL 139


>gi|195123347|ref|XP_002006169.1| GI18706 [Drosophila mojavensis]
 gi|193911237|gb|EDW10104.1| GI18706 [Drosophila mojavensis]
          Length = 906

 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 111/177 (62%), Gaps = 3/177 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           VL V+SN L+ +P +IG L +L+ LD++ NL+ ++P+ I+ C+ L  L+ + N L++LPD
Sbjct: 68  VLQVNSNNLESIPQAIGSLRQLQHLDLNRNLIVNVPEEIKACKHLTHLDLSCNSLQRLPD 127

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            I   LI+L+ L +N   +  LP +   L +LR+L+ RLN L +LP+ +  L+NL+ L+I
Sbjct: 128 AIT-SLISLQELLLNETYLEFLPANFGRLVNLRILEVRLNNLITLPKSMVRLVNLQRLDI 186

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
             N ++ E LP  +G L SL EL + +N+I  +  +IG LR LQ     GN L + P
Sbjct: 187 GGN-EFTE-LPEVVGELKSLRELWIDFNQIRRVAPNIGKLRDLQHFEANGNLLDTLP 241



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 115/193 (59%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+++T+ L+++  L ++   L+ LP + G L  L++L+V  N L +LPK++    +L+ 
Sbjct: 125 LPDAITS-LISLQELLLNETYLEFLPANFGRLVNLRILEVRLNNLITLPKSMVRLVNLQR 183

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+  +LP+ +G EL +L+ L I+ N+I  +  ++  L  L+  +A  N L +LP 
Sbjct: 184 LDIGGNEFTELPEVVG-ELKSLRELWIDFNQIRRVAPNIGKLRDLQHFEANGNLLDTLPN 242

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L N  N+EVL++  N   LE  P+S+G+L SLV      N ++ LPDSI  L +L++L 
Sbjct: 243 ELSNWRNVEVLSVCSN--NLEAFPFSVGMLKSLVTFKCESNGLSELPDSISYLEQLEELV 300

Query: 182 LEGNPLVSPPMDV 194
           L  N L+  P  +
Sbjct: 301 LSHNKLMRLPSTI 313



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 97/184 (52%), Gaps = 6/184 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++   + + N L  LPN +     ++VL V  N LE+ P ++   +SL       N
Sbjct: 222 GKLRDLQHFEANGNLLDTLPNELSNWRNVEVLSVCSNNLEAFPFSVGMLKSLVTFKCESN 281

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L +LPD+I + L  L+ L ++ NK++ LP ++  LT LR L A  N L+ LP++L +  
Sbjct: 282 GLSELPDSISY-LEQLEELVLSHNKLMRLPSTIGSLTKLRFLFADDNQLRHLPDELCSCS 340

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN-- 185
            L VL+++ N   L  LP +IG L  L  L+V  N I  LP S+  L  L  L L  N  
Sbjct: 341 QLSVLSVANN--QLSALPQNIGHLAKLKVLNVVNNYINALPVSMLSLVNLTSLWLSDNQS 398

Query: 186 -PLV 188
            PLV
Sbjct: 399 QPLV 402



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 87/161 (54%), Gaps = 3/161 (1%)

Query: 36  LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           L+ L +S   L++LP  +  C+ L  L  N N L  +P  IG  L  L+ L +N N IV 
Sbjct: 43  LEELHLSNARLQTLPPQLFYCQGLRVLQVNSNNLESIPQAIG-SLRQLQHLDLNRNLIVN 101

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           +P+ +     L  LD   N L+ LP+ + +LI+L+ L +++   YLE LP + G L++L 
Sbjct: 102 VPEEIKACKHLTHLDLSCNSLQRLPDAITSLISLQELLLNET--YLEFLPANFGRLVNLR 159

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
            L+V  N + TLP S+  L  LQ+L + GN     P  V E
Sbjct: 160 ILEVRLNNLITLPKSMVRLVNLQRLDIGGNEFTELPEVVGE 200



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 105/233 (45%), Gaps = 47/233 (20%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL+N+ +L+V  N L  LP S+  L  L+ LD+ GN    LP+ +   +SL EL  +FN
Sbjct: 153 GRLVNLRILEVRLNNLITLPKSMVRLVNLQRLDIGGNEFTELPEVVGELKSLRELWIDFN 212

Query: 68  KLRQLPDTIG-------FE---------------LINLKTLSINCNKIVILPQSLTHLTS 105
           ++R++   IG       FE                 N++ LS+  N +   P S+  L S
Sbjct: 213 QIRRVAPNIGKLRDLQHFEANGNLLDTLPNELSNWRNVEVLSVCSNNLEAFPFSVGMLKS 272

Query: 106 LRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLM------------- 152
           L       N L  LP+ +  L  LE L +S N   L  LP +IG L              
Sbjct: 273 LVTFKCESNGLSELPDSISYLEQLEELVLSHN--KLMRLPSTIGSLTKLRFLFADDNQLR 330

Query: 153 ----------SLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
                      L  L V+ N+++ LP +IG L KL+ L++  N + + P+ ++
Sbjct: 331 HLPDELCSCSQLSVLSVANNQLSALPQNIGHLAKLKVLNVVNNYINALPVSML 383


>gi|418744885|ref|ZP_13301230.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794216|gb|EKR92126.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 367

 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 116/193 (60%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L N+  L++  N+L  LP  IG L  L+ LD+  N +  LPK I   +SL+E
Sbjct: 52  LPEEI-GQLQNLKELNLWENKLTTLPQEIGNLQHLQKLDLGFNKITVLPKEIGQLQSLQE 110

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN +FN+L  LP  IG  L +LK L +  N+   LP+ +  L +L+ L    N L +LP+
Sbjct: 111 LNLSFNQLATLPKEIG-NLQHLKRLFLGLNQFTALPEEIGKLQNLQELYLNENQLTTLPK 169

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++ NL NL+ L +++N   L  LP  IG L +L +L ++ N++TTLP  IG L+ LQ L+
Sbjct: 170 EIGNLQNLQELYLNEN--QLTALPKEIGKLQNLQKLVLNRNQLTTLPIEIGNLQNLQGLN 227

Query: 182 LEGNPLVSPPMDV 194
           L+ N L + P ++
Sbjct: 228 LDKNQLTTLPKEI 240



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/199 (38%), Positives = 119/199 (59%), Gaps = 7/199 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           V VL ++  +L  LP  IG L  LK L++  N L +LP+ I N + L++L+  FNK+  L
Sbjct: 39  VRVLHLNGKKLIALPEEIGQLQNLKELNLWENKLTTLPQEIGNLQHLQKLDLGFNKITVL 98

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P  IG +L +L+ L+++ N++  LP+ + +L  L+ L   LN   +LPE++  L NL+ L
Sbjct: 99  PKEIG-QLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQEL 157

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
            +++N   L TLP  IG L +L EL ++ N++T LP  IG L+ LQKL L  N L + P+
Sbjct: 158 YLNEN--QLTTLPKEIGNLQNLQELYLNENQLTALPKEIGKLQNLQKLVLNRNQLTTLPI 215

Query: 193 DVVE----QGLSAVKGYLS 207
           ++      QGL+  K  L+
Sbjct: 216 EIGNLQNLQGLNLDKNQLT 234



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 104/179 (58%), Gaps = 3/179 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L ++ NQL  LP  IG L  L+ L ++ N L +LP  I N ++L+ LN + N
Sbjct: 172 GNLQNLQELYLNENQLTALPKEIGKLQNLQKLVLNRNQLTTLPIEIGNLQNLQGLNLDKN 231

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +  NK+  LP  + +L  L+ L    N L ++P+++ NL 
Sbjct: 232 QLTTLPKEIG-KLQNLQGLHLGNNKLTALPIEIENLQKLKWLGLNKNQLTTIPKEIGNLQ 290

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           NL+ LN+S N   L T+P  I  L  L  LD+  N++TTLP  IG L+ LQ L L GNP
Sbjct: 291 NLKELNLSSN--QLTTIPKEIENLQKLETLDLYNNQLTTLPKEIGKLQNLQDLYLGGNP 347



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 62/161 (38%), Positives = 98/161 (60%), Gaps = 3/161 (1%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           ++++VL ++G  L +LP+ I   ++L+ELN   NKL  LP  IG  L +L+ L +  NKI
Sbjct: 37  TQVRVLHLNGKKLIALPEEIGQLQNLKELNLWENKLTTLPQEIG-NLQHLQKLDLGFNKI 95

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
            +LP+ +  L SL+ L+   N L +LP+++ NL +L+ L +  N      LP  IG L +
Sbjct: 96  TVLPKEIGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLN--QFTALPEEIGKLQN 153

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L EL ++ N++TTLP  IG L+ LQ+L L  N L + P ++
Sbjct: 154 LQELYLNENQLTTLPKEIGNLQNLQELYLNENQLTALPKEI 194



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L + T +RVL      L +LPE++  L NL+ LN+ +N   L TLP  IG L  L 
Sbjct: 29  LNEALQNPTQVRVLHLNGKKLIALPEEIGQLQNLKELNLWEN--KLTTLPQEIGNLQHLQ 86

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +LD+ +NKIT LP  IG L+ LQ+L+L  N L + P ++
Sbjct: 87  KLDLGFNKITVLPKEIGQLQSLQELNLSFNQLATLPKEI 125



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 1/80 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L ++ NQL  +P  IG L  LK L++S N L ++PK IEN + LE L+   N+L  LP  
Sbjct: 272 LGLNKNQLTTIPKEIGNLQNLKELNLSSNQLTTIPKEIENLQKLETLDLYNNQLTTLPKE 331

Query: 76  IGFELINLKTLSINCNKIVI 95
           IG +L NL+ L +  N  +I
Sbjct: 332 IG-KLQNLQDLYLGGNPSLI 350


>gi|417764090|ref|ZP_12412063.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400353922|gb|EJP06075.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 356

 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 130/227 (57%), Gaps = 11/227 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L N+  L++  NQ+K +P  I  L KL+ L +  N L +LP+ I   ++L+ 
Sbjct: 132 LPQEI-GQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQS 190

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L  LP  IG  L NL+ L +  N++ ILP  +  L +L+ L+ R N L +L +
Sbjct: 191 LDLSTNRLTTLPQEIGH-LQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSK 249

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++E L NL+ L++  N   L   P  IG L +L  LD+  N++TTLP+ IG L+ LQ L 
Sbjct: 250 EIEQLQNLKSLDLRSN--QLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLD 307

Query: 182 LEGNPLVSPPMDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
           L+ N L + P ++ + Q L  +       +NN+  S ++K  + KL+
Sbjct: 308 LDSNQLTTLPQEIGQLQNLQEL------FLNNNQLSSQEKKRIRKLI 348



 Score =  103 bits (258), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 108/184 (58%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V  LD+ +N+ K LP  IG L  L+ L+++ N L  LPK I   ++L +LN + N+++
Sbjct: 48  LKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIK 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            +P  I  +L  L+ L +  N++  LPQ +  L +L+ L+   N +K++P+++E L  L+
Sbjct: 108 TIPKEIE-KLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +  N   L TLP  IG L +L  LD+S N++TTLP  IG L+ LQ L L  N L   
Sbjct: 167 SLGLDNN--QLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTIL 224

Query: 191 PMDV 194
           P ++
Sbjct: 225 PNEI 228



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 70/182 (38%), Positives = 111/182 (60%), Gaps = 3/182 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L+++ NQL  LP  IG L  L+ L++S N ++++PK IE  + L+ L    N
Sbjct: 68  GKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQWLYLPKN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NLK+L+++ N+I  +P+ +  L  L+ L    N L +LP+++  L 
Sbjct: 128 QLTTLPQEIG-QLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQ 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++S N   L TLP  IG L +L +L +  N++T LP+ IG L+ LQ L+L  N L
Sbjct: 187 NLQSLDLSTN--RLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRL 244

Query: 188 VS 189
            +
Sbjct: 245 TT 246



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 91/146 (62%), Gaps = 3/146 (2%)

Query: 49  LPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRV 108
           L K ++N   +  L+ + N+ + LP  IG +L NL+ L++N N++ ILP+ +  L +LR 
Sbjct: 40  LAKALQNPLKVRTLDLSANRFKTLPKEIG-KLKNLQELNLNKNQLTILPKEIGQLKNLRK 98

Query: 109 LDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           L+   N +K++P+++E L  L+ L + +N   L TLP  IG L +L  L++SYN+I T+P
Sbjct: 99  LNLSANQIKTIPKEIEKLQKLQWLYLPKN--QLTTLPQEIGQLKNLKSLNLSYNQIKTIP 156

Query: 169 DSIGCLRKLQKLSLEGNPLVSPPMDV 194
             I  L+KLQ L L+ N L + P ++
Sbjct: 157 KEIEKLQKLQSLGLDNNQLTTLPQEI 182


>gi|418672935|ref|ZP_13234265.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|410580042|gb|EKQ47873.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 738

 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/186 (40%), Positives = 106/186 (56%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  LD+  NQL   P  I  L KL+ LD+S N L  LP  I   ++L+EL    NK
Sbjct: 69  QLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNK 128

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L   P  IG +L NL+TL++  N++  LP  +  L +L  L+ R N L  LP+++  L N
Sbjct: 129 LITFPKEIG-QLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQN 187

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ LN+  N   L TLP  IG L +L  L +S N++TT P  IG L  LQ+L L GN L 
Sbjct: 188 LQTLNLQDN--QLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLK 245

Query: 189 SPPMDV 194
           + P ++
Sbjct: 246 TLPKEI 251



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 106/189 (56%), Gaps = 17/189 (8%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  NQL  LP  IG L  L+ L +S N L + PK I    +L+EL+ N N
Sbjct: 183 GQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGN 242

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG +L  L+ L+++ N+I  LP+               N L +LP ++  L 
Sbjct: 243 QLKTLPKEIG-QLQKLEKLNLDGNQITTLPKG--------------NQLTTLPAEIGQLK 287

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L++S  +  L TLP  IG L +L  LD+  N++TTLP  I  L+ L++L L GN L
Sbjct: 288 NLQILSLS--YNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKL 345

Query: 188 VSPPMDVVE 196
              P ++ E
Sbjct: 346 TIVPKEIWE 354



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 114/223 (51%), Gaps = 30/223 (13%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+P  +  RL N+  L ++ N+L   P  IG L  L+ L++  N L +LP  I   ++LE
Sbjct: 108 MLPNEI-GRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLE 166

Query: 61  ELNANFNKLRQLPDTIG----------------------FELINLKTLSINCNKIVILPQ 98
           +LN   N+L  LP  IG                       +L NL+TL ++ N++   P+
Sbjct: 167 KLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPK 226

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN-------FQYLETLPYSIGLL 151
            +  L +L+ LD   N LK+LP+++  L  LE LN+  N          L TLP  IG L
Sbjct: 227 EIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQL 286

Query: 152 MSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            +L  L +SYN++ TLP  IG L+ L+ L L GN L + P ++
Sbjct: 287 KNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREI 329



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 74/189 (39%), Positives = 108/189 (57%), Gaps = 10/189 (5%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTI---ENCRSLEELNAN 65
           +L N+  L ++   L  LP  I  L  L+ L +  N L+SLPK I    N RSL+ + AN
Sbjct: 543 KLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLD-IGAN 601

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
            N+   LP  I   L NL++L +N N+  I P+ +  L  L +L+   N L +LPE +  
Sbjct: 602 -NEFEVLPKEIA-RLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 659

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L  L++L++S N   L TLP  IG L +L EL + YN+I TLP+ I  L+ L+KL+L  N
Sbjct: 660 LKGLQMLDLSHN--RLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYEN 717

Query: 186 PLVSPPMDV 194
           P+  PP ++
Sbjct: 718 PI--PPQEL 724



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 102/184 (55%), Gaps = 3/184 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L +  N+L  LP  IG L  LK LD+ GN L +LP+ I   ++L+EL  N N
Sbjct: 284 GQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGN 343

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  +P  I +EL NL  L +  N+I  LP+ +    +L+ L+ R N L +LP ++    
Sbjct: 344 KLTIVPKEI-WELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIG--E 400

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
              +  ++     ++ LP  IG L +L   ++S NK+ ++P  IG L+ L+ L LE N L
Sbjct: 401 LKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQL 460

Query: 188 VSPP 191
            + P
Sbjct: 461 KTLP 464



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 1/102 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ARL N+  L ++ N+ K  P  I  L KL +L+V+ N L++LP+ I   + L+ L+ + N
Sbjct: 612 ARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHN 671

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           +L  LP  IG +L NL  L +  N+I  LP+ +  L +LR L
Sbjct: 672 RLTTLPSEIG-QLHNLTELYLQYNRIKTLPEEIARLQNLRKL 712



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 3/94 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +V+L+V++NQL  LP  IG L  L++LD+S N L +LP  I    +L EL   +N+++ L
Sbjct: 640 LVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTL 699

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSL 106
           P+ I   L NL+ L++  N I   PQ L  +  L
Sbjct: 700 PEEIA-RLQNLRKLTLYENPIP--PQELDKIRKL 730



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +  ++RVL+       +LP+++E L NL+ L++  N   L T P  I  L  L 
Sbjct: 40  LTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDN--QLATFPAVIVELQKLE 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LD+S N++  LP+ IG L+ LQ+L L  N L++ P ++
Sbjct: 98  SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEI 136


>gi|418669438|ref|ZP_13230822.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410754822|gb|EKR16467.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 633

 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/179 (38%), Positives = 107/179 (59%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  N+L  LPN IG L  L+ L +  N L + PK I   R+L+ LN   N+L  LP  
Sbjct: 101 LDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVE 160

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL+ L++  N++ +LP+ +  L +L+ L+ + N L +LP ++  L NL+ L +S
Sbjct: 161 IG-QLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLS 219

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +N   L T P  IG L +L EL++ +N++T LP  IG L+ L+ L L  N L + P ++
Sbjct: 220 EN--QLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEI 276



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/194 (37%), Positives = 111/194 (57%), Gaps = 4/194 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+P  +  RL N+  L ++ N+L   P  IG L  L+ L++  N L +LP  I   ++LE
Sbjct: 110 MLPNEI-GRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLE 168

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +LN   N+L  LP  IG +L NL+TL++  N++  LP  +  L +L+ L    N L + P
Sbjct: 169 KLNLRKNRLTVLPKEIG-QLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFP 227

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++  L NL+ LN+  N   L  LP  IG L +L  L++S N++TT P  IG L+KLQ L
Sbjct: 228 KEIGQLENLQELNLKWN--RLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDL 285

Query: 181 SLEGNPLVSPPMDV 194
            L  N L + P ++
Sbjct: 286 GLGRNQLTTFPKEI 299



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 75/186 (40%), Positives = 107/186 (57%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  LD+  NQL   P  I  L KL+ LD+S N L  LP  I   ++L+EL    NK
Sbjct: 71  QLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNK 130

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L   P  IG +L NL+TL++  N++  LP  +  L +L  L+ R N L  LP+++  L N
Sbjct: 131 LITFPKEIG-QLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQN 189

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ LN+  N   L TLP  IG L +L  L +S N++TT P  IG L  LQ+L+L+ N L 
Sbjct: 190 LQTLNLQDN--QLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLT 247

Query: 189 SPPMDV 194
           + P ++
Sbjct: 248 ALPKEI 253



 Score =  103 bits (257), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 111/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  NQL  LP  IG L  L+ L +S N L + PK I    +L+ELN  +N
Sbjct: 185 GQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWN 244

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L ++ N++   P+ +  L  L+ L    N L + P+++  L 
Sbjct: 245 RLTALPKEIG-QLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLK 303

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L++  N    +T+   IG L +L++L++SYN++ TLP  IG L+KLQ LSL  N L
Sbjct: 304 NLQMLDLCYN--QFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQL 361

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 362 TTLPKEI 368



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/174 (40%), Positives = 98/174 (56%), Gaps = 3/174 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           NQL  LP  IG L KL+ L +  N L +LPK I   ++L  L+   N+L  LP  IG +L
Sbjct: 336 NQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIG-QL 394

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            NL  L +  N++   P+ +  L +L+ LD   N L +LP+++  L NLE L +S+N   
Sbjct: 395 KNLYNLGLGRNQLATFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSEN--Q 452

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L T P  IG L  L +L +SYN++  LP  IG L KLQ L L  N LV  P ++
Sbjct: 453 LTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRLVILPKEI 506



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 102/184 (55%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           LNV VLD+       LP  I  L  L+ LD+  N L + P  I   + LE L+ + N+L 
Sbjct: 50  LNVRVLDLSGQNFTTLPKKIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLV 109

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ IG  L NL+ L +  NK++  P+ +  L +L+ L+ + N L +LP ++  L NLE
Sbjct: 110 MLPNEIG-RLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLE 168

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+ +N   L  LP  IG L +L  L++  N++ TLP  IG L+ LQ L L  N L + 
Sbjct: 169 KLNLRKN--RLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTF 226

Query: 191 PMDV 194
           P ++
Sbjct: 227 PKEI 230



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 112/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+ +N+L  LP  IG L  L+ L++S N L + PK I   + L++L  ++N
Sbjct: 415 GQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYN 474

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L  L+ L ++ N++VILP+ +  L +L++LD   N  K++ +++  L 
Sbjct: 475 RLVILPKEIG-QLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLK 533

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  LN+S N   L TLP  IG L +L  LD+  N++TTLP  IG L+ L  L L  N L
Sbjct: 534 NLLQLNLSYN--QLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQL 591

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 592 TTLPKEI 598



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 104/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +LD+  NQ K +   IG L  L  L++S N L +LP  I   + L++L+   N
Sbjct: 300 GQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRN 359

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL  L +  N++  LP+ +  L +L  L    N L + P+++  L 
Sbjct: 360 QLTTLPKEIG-QLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLATFPKEIGQLE 418

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++  N   L  LP  IG L +L  L++S N++TT P  IG L+KLQ L L  N L
Sbjct: 419 NLQELDLWNN--RLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRL 476

Query: 188 VSPPMDV 194
           V  P ++
Sbjct: 477 VILPKEI 483



 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +  ++RVLD       +LP+ +E L NL+ L++  N   L T P  I  L  L 
Sbjct: 42  LTEALQNPLNVRVLDLSGQNFTTLPKKIEQLKNLQELDLRDN--QLATFPAVIVELQKLE 99

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LD+S N++  LP+ IG L+ LQ+L L  N L++ P ++
Sbjct: 100 SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEI 138



 Score = 40.8 bits (94), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 30/57 (52%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           NQL  LP  IG L  L  LD+  N L +LPK I   ++L  L    N+L  LP  IG
Sbjct: 543 NQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEIG 599


>gi|417776853|ref|ZP_12424685.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410573349|gb|EKQ36399.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
          Length = 738

 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/186 (40%), Positives = 106/186 (56%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  LD+  NQL   P  I  L KL+ LD+S N L  LP  I   ++L+EL    NK
Sbjct: 69  QLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNK 128

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L   P  IG +L NL+TL++  N++  LP  +  L +L  L+ R N L  LP+++  L N
Sbjct: 129 LITFPKEIG-QLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQN 187

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ LN+  N   L TLP  IG L +L  L +S N++TT P  IG L  LQ+L L GN L 
Sbjct: 188 LQTLNLQDN--QLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLK 245

Query: 189 SPPMDV 194
           + P ++
Sbjct: 246 TLPKEI 251



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 106/189 (56%), Gaps = 17/189 (8%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  NQL  LP  IG L  L+ L +S N L + PK I    +L+EL+ N N
Sbjct: 183 GQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGN 242

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG +L  L+ L+++ N+I  LP+               N L +LP ++  L 
Sbjct: 243 QLKTLPKEIG-QLQKLEKLNLDGNQITTLPKG--------------NQLTTLPAEIGQLK 287

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L++S  +  L TLP  IG L +L  LD+  N++TTLP  I  L+ L++L L GN L
Sbjct: 288 NLQILSLS--YNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKL 345

Query: 188 VSPPMDVVE 196
              P ++ E
Sbjct: 346 TIVPKEIWE 354



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 114/223 (51%), Gaps = 30/223 (13%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+P  +  RL N+  L ++ N+L   P  IG L  L+ L++  N L +LP  I   ++LE
Sbjct: 108 MLPNEI-GRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLE 166

Query: 61  ELNANFNKLRQLPDTIG----------------------FELINLKTLSINCNKIVILPQ 98
           +LN   N+L  LP  IG                       +L NL+TL ++ N++   P+
Sbjct: 167 KLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPK 226

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN-------FQYLETLPYSIGLL 151
            +  L +L+ LD   N LK+LP+++  L  LE LN+  N          L TLP  IG L
Sbjct: 227 EIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQL 286

Query: 152 MSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            +L  L +SYN++ TLP  IG L+ L+ L L GN L + P ++
Sbjct: 287 KNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREI 329



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/189 (39%), Positives = 108/189 (57%), Gaps = 10/189 (5%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTI---ENCRSLEELNAN 65
           RL N+  L ++   L  LP  I  L  L+ L +  N L+SLPK I    N RSL+ + AN
Sbjct: 543 RLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLD-IGAN 601

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
            N+   LP  I   L NL++L +N N+  I P+ +  L  L +L+   N L +LPE +  
Sbjct: 602 -NEFEVLPKEIA-RLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 659

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L  L++L++S N   L TLP  IG L +L EL + YN+I TLP+ I  L+ L+KL+L  N
Sbjct: 660 LKGLQMLDLSHN--RLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYEN 717

Query: 186 PLVSPPMDV 194
           P+  PP ++
Sbjct: 718 PI--PPQEL 724



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 102/184 (55%), Gaps = 3/184 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L +  N+L  LP  IG L  LK LD+ GN L +LP+ I   ++L+EL  N N
Sbjct: 284 GQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGN 343

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  +P  I +EL NL  L +  N+I  LP+ +    +L+ L+ R N L +LP ++    
Sbjct: 344 KLTIVPKEI-WELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIG--E 400

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
              +  ++     ++ LP  IG L +L   ++S NK+ ++P  IG L+ L+ L LE N L
Sbjct: 401 LKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQL 460

Query: 188 VSPP 191
            + P
Sbjct: 461 KTLP 464



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 1/102 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ARL N+  L ++ N+ K  P  I  L KL +L+V+ N L++LP+ I   + L+ L+ + N
Sbjct: 612 ARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHN 671

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           +L  LP  IG +L NL  L +  N+I  LP+ +  L +LR L
Sbjct: 672 RLTTLPSEIG-QLHNLTELYLQYNRIKTLPEEIARLQNLRKL 712



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 3/94 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +V+L+V++NQL  LP  IG L  L++LD+S N L +LP  I    +L EL   +N+++ L
Sbjct: 640 LVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTL 699

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSL 106
           P+ I   L NL+ L++  N I   PQ L  +  L
Sbjct: 700 PEEIA-RLQNLRKLTLYENPIP--PQELDKIRKL 730



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +  ++RVL+       +LP+++E L NL+ L++  N   L T P  I  L  L 
Sbjct: 40  LTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDN--QLATFPAVIVELQKLE 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LD+S N++  LP+ IG L+ LQ+L L  N L++ P ++
Sbjct: 98  SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEI 136


>gi|418744901|ref|ZP_13301246.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794232|gb|EKR92142.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 267

 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/202 (39%), Positives = 115/202 (56%), Gaps = 6/202 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +   L N+  L++ +N+L  LP  IG L KL+ L ++ N L +LPK I   + LE 
Sbjct: 41  LPEEI-GTLQNLQSLNLENNRLITLPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEW 99

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+LR LP  IG +L NLK L +  N++  LP+ +  L  L+ L    N L +LP+
Sbjct: 100 LGLENNQLRILPQEIG-KLQNLKELILENNRLATLPKEIGTLRKLQHLYLANNQLATLPK 158

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L NL+ L++S N   L TLP  IG L  L  L +  N++ TLP  IG L+ L+ L 
Sbjct: 159 EIGQLQNLKDLDLSDN--QLVTLPEEIGTLQRLEWLSLKNNQLRTLPQEIGQLQNLKDLD 216

Query: 182 LEGNPLVSPPMDVVEQGLSAVK 203
           L GNP  + P ++V  GL  +K
Sbjct: 217 LSGNPFTTFPQEIV--GLKHLK 236



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  +  L + +N+L  LP  IG L  L+ L++  N L +LPK I   + LE L    N
Sbjct: 23  GKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLITLPKEIGTLQKLEWLYLTNN 82

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L  L+ L +  N++ ILPQ +  L +L+ L    N L +LP+++  L 
Sbjct: 83  QLATLPKEIG-KLQRLEWLGLENNQLRILPQEIGKLQNLKELILENNRLATLPKEIGTLR 141

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L ++ N   L TLP  IG L +L +LD+S N++ TLP+ IG L++L+ LSL+ N L
Sbjct: 142 KLQHLYLANN--QLATLPKEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQL 199

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 200 RTLPQEI 206



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 88/159 (55%), Gaps = 3/159 (1%)

Query: 36  LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           LK L ++ N L +LP  I   R LE L    N+L  LP+ IG  L NL++L++  N+++ 
Sbjct: 5   LKWLHLANNQLTTLPNEIGKLRKLEYLRLENNRLTTLPEEIGT-LQNLQSLNLENNRLIT 63

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           LP+ +  L  L  L    N L +LP+++  L  LE L +  N   L  LP  IG L +L 
Sbjct: 64  LPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENN--QLRILPQEIGKLQNLK 121

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           EL +  N++ TLP  IG LRKLQ L L  N L + P ++
Sbjct: 122 ELILENNRLATLPKEIGTLRKLQHLYLANNQLATLPKEI 160



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 53/94 (56%), Gaps = 1/94 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L + +NQL  LP  IG L  LK LD+S N L +LP+ I   + LE L+   N+LR LP  
Sbjct: 146 LYLANNQLATLPKEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQLRTLPQE 205

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           IG +L NLK L ++ N     PQ +  L  L+ L
Sbjct: 206 IG-QLQNLKDLDLSGNPFTTFPQEIVGLKHLKTL 238



 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +   L  +  L + +NQL+ LP  IG L  LK LD+SGN   + P+ I   + L+ 
Sbjct: 179 LPEEI-GTLQRLEWLSLKNNQLRTLPQEIGQLQNLKDLDLSGNPFTTFPQEIVGLKHLKT 237

Query: 62  L 62
           L
Sbjct: 238 L 238


>gi|417762759|ref|ZP_12410747.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|409941504|gb|EKN87133.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
          Length = 738

 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/186 (40%), Positives = 106/186 (56%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  LD+  NQL   P  I  L KL+ LD+S N L  LP  I   ++L+EL    NK
Sbjct: 69  QLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNK 128

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L   P  IG +L NL+TL++  N++  LP  +  L +L  L+ R N L  LP+++  L N
Sbjct: 129 LITFPKEIG-QLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQN 187

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ LN+  N   L TLP  IG L +L  L +S N++TT P  IG L  LQ+L L GN L 
Sbjct: 188 LQTLNLQDN--QLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLK 245

Query: 189 SPPMDV 194
           + P ++
Sbjct: 246 TLPKEI 251



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 106/189 (56%), Gaps = 17/189 (8%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  NQL  LP  IG L  L+ L +S N L + PK I    +L+EL+ N N
Sbjct: 183 GQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGN 242

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG +L  L+ L+++ N+I  LP+               N L +LP ++  L 
Sbjct: 243 QLKTLPKEIG-QLQKLEKLNLDGNQITTLPKG--------------NQLTTLPAEIGQLK 287

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L++S  +  L TLP  IG L +L  LD+  N++TTLP  I  L+ L++L L GN L
Sbjct: 288 NLQILSLS--YNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKL 345

Query: 188 VSPPMDVVE 196
              P ++ E
Sbjct: 346 TIVPKEIWE 354



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 114/223 (51%), Gaps = 30/223 (13%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+P  +  RL N+  L ++ N+L   P  IG L  L+ L++  N L +LP  I   ++LE
Sbjct: 108 MLPNEI-GRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLE 166

Query: 61  ELNANFNKLRQLPDTIG----------------------FELINLKTLSINCNKIVILPQ 98
           +LN   N+L  LP  IG                       +L NL+TL ++ N++   P+
Sbjct: 167 KLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPK 226

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN-------FQYLETLPYSIGLL 151
            +  L +L+ LD   N LK+LP+++  L  LE LN+  N          L TLP  IG L
Sbjct: 227 EIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQL 286

Query: 152 MSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            +L  L +SYN++ TLP  IG L+ L+ L L GN L + P ++
Sbjct: 287 KNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREI 329



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/189 (39%), Positives = 108/189 (57%), Gaps = 10/189 (5%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTI---ENCRSLEELNAN 65
           RL N+  L ++   L  LP  I  L  L+ L +  N L+SLPK I    N RSL+ + AN
Sbjct: 543 RLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLD-IGAN 601

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
            N+   LP  I   L NL++L +N N+  I P+ +  L  L +L+   N L +LPE +  
Sbjct: 602 -NEFEVLPKEIA-RLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 659

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L  L++L++S N   L TLP  IG L +L EL + YN+I TLP+ I  L+ L+KL+L  N
Sbjct: 660 LKGLQMLDLSHN--RLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYEN 717

Query: 186 PLVSPPMDV 194
           P+  PP ++
Sbjct: 718 PI--PPQEL 724



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 102/184 (55%), Gaps = 3/184 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L +  N+L  LP  IG L  LK LD+ GN L +LP+ I   ++L+EL  N N
Sbjct: 284 GQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGN 343

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  +P  I +EL NL  L +  N+I  LP+ +    +L+ L+ R N L +LP ++    
Sbjct: 344 KLTIVPKEI-WELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIG--E 400

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
              +  ++     ++ LP  IG L +L   ++S NK+ ++P  IG L+ L+ L LE N L
Sbjct: 401 LKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQL 460

Query: 188 VSPP 191
            + P
Sbjct: 461 KTLP 464



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 1/102 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ARL N+  L ++ N+ K  P  I  L KL +L+V+ N L++LP+ I   + L+ L+ + N
Sbjct: 612 ARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHN 671

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           +L  LP  IG +L NL  L +  N+I  LP+ +  L +LR L
Sbjct: 672 RLTTLPSEIG-QLHNLTELYLQYNRIKTLPEEIARLQNLRKL 712



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 3/94 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +V+L+V++NQL  LP  IG L  L++LD+S N L +LP  I    +L EL   +N+++ L
Sbjct: 640 LVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTL 699

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSL 106
           P+ I   L NL+ L++  N I   PQ L  +  L
Sbjct: 700 PEEIA-RLQNLRKLTLYENPIP--PQELDKIRKL 730



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +  ++RVL+       +LP+++E L NL+ L++  N   L T P  I  L  L 
Sbjct: 40  LTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDN--QLATFPAVIVELQKLE 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LD+S N++  LP+ IG L+ LQ+L L  N L++ P ++
Sbjct: 98  SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEI 136


>gi|418707316|ref|ZP_13268142.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772363|gb|EKR47551.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 424

 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/184 (39%), Positives = 108/184 (58%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VLD+   +LK LP  IG L  L++LD+S N L  LPK I   ++L+ L+   N+L 
Sbjct: 47  LDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLT 106

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG +L NL+ L ++ N++   P+ +  L  L+ L+   N +K++P+++E L  L+
Sbjct: 107 ILPKEIG-KLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQ 165

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +  N   L TLP  IG L  L  L +SYN+I TLP  I  L+KLQ L L  N L + 
Sbjct: 166 SLYLPNN--QLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTL 223

Query: 191 PMDV 194
           P ++
Sbjct: 224 PQEI 227



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 114/208 (54%), Gaps = 22/208 (10%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  +  L +  NQ+K LP  I  L KL+ L +  N L +LP+ IE  + LE L  + N
Sbjct: 182 GKLQKLQWLYLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNN 241

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NLK L +N N++  +PQ + HL +L+ L    N L ++P+++  L 
Sbjct: 242 QLTTLPQEIG-QLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQ 300

Query: 128 NLEVLNIS--------------QNFQ-------YLETLPYSIGLLMSLVELDVSYNKITT 166
           NL++L++               QN Q        L T+P  IG L +L EL +S N++TT
Sbjct: 301 NLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTT 360

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +P  IG L+ LQ+L L  N L++ P ++
Sbjct: 361 IPKEIGQLQNLQELYLSNNQLITIPKEI 388



 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 106/186 (56%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ +LD+ SNQL  LP  IG L  L+ L +S N L + PK I   + L+ LN + N+
Sbjct: 91  QLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQ 150

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           ++ +P  I  +L  L++L +  N++  LPQ +  L  L+ L    N +K+LP+++E L  
Sbjct: 151 IKTIPKEIE-KLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQK 209

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L + +N   L TLP  I  L  L  L +  N++TTLP  IG L+ L+ L L  N L 
Sbjct: 210 LQWLYLHKN--QLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLT 267

Query: 189 SPPMDV 194
           + P ++
Sbjct: 268 TIPQEI 273



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/170 (38%), Positives = 102/170 (60%), Gaps = 3/170 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L + +NQL  LP  IG L  LKVL ++ N L ++P+ I + ++L++L    N+L  +P  
Sbjct: 236 LGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKE 295

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL+ L +  N++ ILP+ +  L +L+ L    N L ++P+++  L NL+ L +S
Sbjct: 296 IG-QLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLS 354

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            N   L T+P  IG L +L EL +S N++ T+P  IG L+ LQ L L  N
Sbjct: 355 NN--QLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNN 402



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 106/187 (56%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +LD+  NQL  LP  I  L  L++LD+  N L  LPK I   ++L+EL  + N
Sbjct: 67  GQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNN 126

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L   P  IG +L  L+ L+++ N+I  +P+ +  L  L+ L    N L +LP+++  L 
Sbjct: 127 QLTTFPKEIG-KLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQ 185

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L +S N   ++TLP  I  L  L  L +  N++TTLP  I  L+KL+ L L+ N L
Sbjct: 186 KLQWLYLSYN--QIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQL 243

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 244 TTLPQEI 250



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 79/136 (58%), Gaps = 2/136 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +   L N+  L + SNQL  +P  IG L  L++LD+  N L  LPK I   ++L+E
Sbjct: 269 IPQEI-GHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQE 327

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+L  +P  IG +L NL+ L ++ N++  +P+ +  L +L+ L    N L ++P+
Sbjct: 328 LYLSNNQLTTIPKEIG-QLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPK 386

Query: 122 DLENLINLEVLNISQN 137
           ++  L NL+ L +  N
Sbjct: 387 EIGQLQNLQTLYLRNN 402



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 58/99 (58%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVLD     LK+LP+ +  L NL++L++S N   L  LP  I  L +L 
Sbjct: 39  LTKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDN--QLIILPKEIRQLKNLQ 96

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LD+  N++T LP  IG L+ LQ+L L  N L + P ++
Sbjct: 97  MLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEI 135


>gi|418755469|ref|ZP_13311672.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           MOR084]
 gi|409964178|gb|EKO32071.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           MOR084]
          Length = 217

 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/211 (36%), Positives = 114/211 (54%), Gaps = 23/211 (10%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L N+  L + +NQL  LP  IG L  L+ L++  N L +LPK I   ++L++
Sbjct: 9   LPEEI-GKLQNLQELHLENNQLTTLPIEIGKLQNLQELNLGFNQLTALPKEIGKLQNLKD 67

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + NKL  LP  IG +L NLK L+++ NK+  LP+ +  L  L+ L+   N L +LPE
Sbjct: 68  LNLDSNKLTTLPKEIG-KLQNLKDLNLDSNKLTTLPKEIEKLQKLKDLNLTYNQLTALPE 126

Query: 122 DLENLINLEVLNISQN---------------------FQYLETLPYSIGLLMSLVELDVS 160
           ++  L NL+ L++  N                          TLP  IG L  L ELD+ 
Sbjct: 127 EIGKLQNLQELDLHSNQLTTLSQEIGNLQNLKLLNLNDNQFTTLPKEIGNLQKLQELDLG 186

Query: 161 YNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           YN++T LP+ IG L+ L+ L L  N L + P
Sbjct: 187 YNQLTALPEEIGKLQNLKDLYLNNNKLTTLP 217



 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 26/197 (13%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  LP  IG L  L+ L +  N L +LP  I   ++L+ELN  FN+L  LP  IG +L
Sbjct: 4   NRLANLPEEIGKLQNLQELHLENNQLTTLPIEIGKLQNLQELNLGFNQLTALPKEIG-KL 62

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            NLK L+++ NK+  LP+ +  L +L+ L+   N L +LP+++E L  L+ LN++  +  
Sbjct: 63  QNLKDLNLDSNKLTTLPKEIGKLQNLKDLNLDSNKLTTLPKEIEKLQKLKDLNLT--YNQ 120

Query: 141 LETLPYSIGLLMSLVELDVSYNKI-----------------------TTLPDSIGCLRKL 177
           L  LP  IG L +L ELD+  N++                       TTLP  IG L+KL
Sbjct: 121 LTALPEEIGKLQNLQELDLHSNQLTTLSQEIGNLQNLKLLNLNDNQFTTLPKEIGNLQKL 180

Query: 178 QKLSLEGNPLVSPPMDV 194
           Q+L L  N L + P ++
Sbjct: 181 QELDLGYNQLTALPEEI 197


>gi|195334517|ref|XP_002033924.1| GM21584 [Drosophila sechellia]
 gi|194125894|gb|EDW47937.1| GM21584 [Drosophila sechellia]
          Length = 903

 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 71/180 (39%), Positives = 113/180 (62%), Gaps = 3/180 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           VL V+SN L+ +P +IG L  L+ LD++ NL+ ++P+ I++C+ L  L+ + N L++LPD
Sbjct: 121 VLHVNSNNLETIPQAIGSLRHLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPD 180

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            I   LI+L+ L +N   +  LP +   L +LR+L+ RLN L +LP+ +  LINL+ L+I
Sbjct: 181 AIT-SLISLQELLLNETYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQRLDI 239

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N ++ E LP  +G L SL EL + +N+I  +  +IG LR LQ     GN L + P ++
Sbjct: 240 GGN-EFTE-LPEVVGELKSLRELWIDFNQIRRVSANIGKLRDLQHFEANGNLLDTLPSEL 297



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 115/193 (59%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+++T+ L+++  L ++   L+ LP + G L  L++L++  N L +LPK++    +L+ 
Sbjct: 178 LPDAITS-LISLQELLLNETYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQR 236

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+  +LP+ +G EL +L+ L I+ N+I  +  ++  L  L+  +A  N L +LP 
Sbjct: 237 LDIGGNEFTELPEVVG-ELKSLRELWIDFNQIRRVSANIGKLRDLQHFEANGNLLDTLPS 295

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L N  N+EVL+I  N   LE  P+S+G+L SLV      N +T LPDSI  L +L++L 
Sbjct: 296 ELSNWRNVEVLSICSN--SLEAFPFSVGMLKSLVTFKCESNGLTELPDSISYLEQLEELV 353

Query: 182 LEGNPLVSPPMDV 194
           L  N L+  P  +
Sbjct: 354 LSHNKLIRLPSTI 366



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/152 (37%), Positives = 82/152 (53%), Gaps = 3/152 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV VL + SN L+  P S+G L  L       N L  LP +I     LEEL  + NKL +
Sbjct: 302 NVEVLSICSNSLEAFPFSVGMLKSLVTFKCESNGLTELPDSISYLEQLEELVLSHNKLIR 361

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP TIG  L +L+ L  + N++  LP  L     L VL    N L +LP+++ NL  ++V
Sbjct: 362 LPSTIGM-LRSLRFLFADDNQLRQLPDELCSCQQLSVLSVANNQLSALPQNIGNLSKMKV 420

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           LN+  N  Y+  LP S+  L++L  + +S N+
Sbjct: 421 LNVVNN--YINALPVSMLNLVNLTSMWLSDNQ 450



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 93/181 (51%), Gaps = 3/181 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD  +  L   P        L+ L +S   L++LP  +  C+ L  L+ N N L  +P  
Sbjct: 76  LDYSNTPLTDFPEVWQHERTLEELYLSTTRLQALPPQLFYCQGLRVLHVNSNNLETIPQA 135

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L +L+ L +N N IV +P+ +     L  LD   N L+ LP+ + +LI+L+ L + 
Sbjct: 136 IG-SLRHLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITSLISLQELLL- 193

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            N  YLE LP + G L++L  L++  N + TLP S+  L  LQ+L + GN     P  V 
Sbjct: 194 -NETYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQRLDIGGNEFTELPEVVG 252

Query: 196 E 196
           E
Sbjct: 253 E 253



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 97/184 (52%), Gaps = 6/184 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++   + + N L  LP+ +     ++VL +  N LE+ P ++   +SL       N
Sbjct: 275 GKLRDLQHFEANGNLLDTLPSELSNWRNVEVLSICSNSLEAFPFSVGMLKSLVTFKCESN 334

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L +LPD+I + L  L+ L ++ NK++ LP ++  L SLR L A  N L+ LP++L +  
Sbjct: 335 GLTELPDSISY-LEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQLRQLPDELCSCQ 393

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN-- 185
            L VL+++ N   L  LP +IG L  +  L+V  N I  LP S+  L  L  + L  N  
Sbjct: 394 QLSVLSVANN--QLSALPQNIGNLSKMKVLNVVNNYINALPVSMLNLVNLTSMWLSDNQS 451

Query: 186 -PLV 188
            PLV
Sbjct: 452 QPLV 455



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 79/141 (56%), Gaps = 8/141 (5%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L ++V     SN L  LP+SI  L +L+ L +S N L  LP TI   RSL  L A+ N+L
Sbjct: 323 LKSLVTFKCESNGLTELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQL 382

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           RQLPD +      L  LS+  N++  LPQ++ +L+ ++VL+   N + +LP  + NL+NL
Sbjct: 383 RQLPDELC-SCQQLSVLSVANNQLSALPQNIGNLSKMKVLNVVNNYINALPVSMLNLVNL 441

Query: 130 EVLNISQN-------FQYLET 143
             + +S N        QYL+ 
Sbjct: 442 TSMWLSDNQSQPLVPLQYLDA 462


>gi|195024930|ref|XP_001985965.1| GH21104 [Drosophila grimshawi]
 gi|193901965|gb|EDW00832.1| GH21104 [Drosophila grimshawi]
          Length = 910

 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 112/177 (63%), Gaps = 3/177 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           VL V+SN L+ +P +IG L +L+ LD++ NL+ ++P+ I+ C+ L  L+ + N L++LPD
Sbjct: 68  VLQVNSNNLESIPQAIGSLRQLQHLDLNRNLIVNVPEEIKACKHLTHLDLSCNSLQRLPD 127

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            I   LI+L+ L +N   +  LP +   L +LR+L+ RLN L +LP+ +  L++L+ L+I
Sbjct: 128 AIT-SLISLQELLLNETYLEFLPANFGRLVNLRILEVRLNNLITLPKSMVRLVSLQRLDI 186

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
             N ++ E LP  IG L SL EL + +N+I  +  +IG LR+LQ     GN L + P
Sbjct: 187 GGN-EFTE-LPEVIGELKSLRELWIDFNQIRRVAPNIGKLRELQHFEANGNLLDALP 241



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 114/193 (59%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+++T+ L+++  L ++   L+ LP + G L  L++L+V  N L +LPK++    SL+ 
Sbjct: 125 LPDAITS-LISLQELLLNETYLEFLPANFGRLVNLRILEVRLNNLITLPKSMVRLVSLQR 183

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+  +LP+ IG EL +L+ L I+ N+I  +  ++  L  L+  +A  N L +LP 
Sbjct: 184 LDIGGNEFTELPEVIG-ELKSLRELWIDFNQIRRVAPNIGKLRELQHFEANGNLLDALPN 242

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L N  N+EVL++  N   LE  P+S G+L SLV      N ++ LPDSI  L +L++L 
Sbjct: 243 ELSNWRNVEVLSVCSN--NLEAFPFSFGMLKSLVTFKCESNGLSELPDSISYLEQLEELV 300

Query: 182 LEGNPLVSPPMDV 194
           L  N L+  P  +
Sbjct: 301 LSHNKLMRLPSTI 313



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/152 (38%), Positives = 82/152 (53%), Gaps = 3/152 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV VL V SN L+  P S G L  L       N L  LP +I     LEEL  + NKL +
Sbjct: 249 NVEVLSVCSNNLEAFPFSFGMLKSLVTFKCESNGLSELPDSISYLEQLEELVLSHNKLMR 308

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP TIG  L+ L+ L  + N++  LP  L   + L VL    N L +LP+++ +L  L+V
Sbjct: 309 LPSTIG-SLVKLRFLFADDNQLRQLPDELCSCSQLSVLSVANNQLSALPQNIGHLGKLKV 367

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           LN+  N  Y+  LP S+  L++L  L +S N+
Sbjct: 368 LNVVNN--YINALPVSMLSLVNLTSLWLSDNQ 397



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 91/176 (51%), Gaps = 6/176 (3%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
            + + N L  LPN +     ++VL V  N LE+ P +    +SL       N L +LPD+
Sbjct: 230 FEANGNLLDALPNELSNWRNVEVLSVCSNNLEAFPFSFGMLKSLVTFKCESNGLSELPDS 289

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           I + L  L+ L ++ NK++ LP ++  L  LR L A  N L+ LP++L +   L VL+++
Sbjct: 290 ISY-LEQLEELVLSHNKLMRLPSTIGSLVKLRFLFADDNQLRQLPDELCSCSQLSVLSVA 348

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN---PLV 188
            N   L  LP +IG L  L  L+V  N I  LP S+  L  L  L L  N   PLV
Sbjct: 349 NN--QLSALPQNIGHLGKLKVLNVVNNYINALPVSMLSLVNLTSLWLSDNQSQPLV 402



 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 105/233 (45%), Gaps = 47/233 (20%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL+N+ +L+V  N L  LP S+  L  L+ LD+ GN    LP+ I   +SL EL  +FN
Sbjct: 153 GRLVNLRILEVRLNNLITLPKSMVRLVSLQRLDIGGNEFTELPEVIGELKSLRELWIDFN 212

Query: 68  KLRQLPDTIG-------FE---------------LINLKTLSINCNKIVILPQSLTHLTS 105
           ++R++   IG       FE                 N++ LS+  N +   P S   L S
Sbjct: 213 QIRRVAPNIGKLRELQHFEANGNLLDALPNELSNWRNVEVLSVCSNNLEAFPFSFGMLKS 272

Query: 106 LRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLM------------- 152
           L       N L  LP+ +  L  LE L +S N   L  LP +IG L+             
Sbjct: 273 LVTFKCESNGLSELPDSISYLEQLEELVLSHN--KLMRLPSTIGSLVKLRFLFADDNQLR 330

Query: 153 ----------SLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
                      L  L V+ N+++ LP +IG L KL+ L++  N + + P+ ++
Sbjct: 331 QLPDELCSCSQLSVLSVANNQLSALPQNIGHLGKLKVLNVVNNYINALPVSML 383



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 77/141 (54%), Gaps = 8/141 (5%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L ++V     SN L  LP+SI  L +L+ L +S N L  LP TI +   L  L A+ N+L
Sbjct: 270 LKSLVTFKCESNGLSELPDSISYLEQLEELVLSHNKLMRLPSTIGSLVKLRFLFADDNQL 329

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           RQLPD +      L  LS+  N++  LPQ++ HL  L+VL+   N + +LP  + +L+NL
Sbjct: 330 RQLPDELC-SCSQLSVLSVANNQLSALPQNIGHLGKLKVLNVVNNYINALPVSMLSLVNL 388

Query: 130 EVLNISQN-------FQYLET 143
             L +S N        QYL+ 
Sbjct: 389 TSLWLSDNQSQPLVPLQYLDA 409



 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 88/175 (50%), Gaps = 23/175 (13%)

Query: 39  LDVSGN-LLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILP 97
           LD S   L ++ P+  ++ R+LEEL+ +  +L+ LP  + F    L+ L +N N +  +P
Sbjct: 22  LDYSNTPLQDAFPEVWQHERTLEELHLSNARLQTLPPQL-FYCQGLRVLQVNSNNLESIP 80

Query: 98  QSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNF------------------- 138
           Q++  L  L+ LD   N + ++PE+++   +L  L++S N                    
Sbjct: 81  QAIGSLRQLQHLDLNRNLIVNVPEEIKACKHLTHLDLSCNSLQRLPDAITSLISLQELLL 140

Query: 139 --QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
              YLE LP + G L++L  L+V  N + TLP S+  L  LQ+L + GN     P
Sbjct: 141 NETYLEFLPANFGRLVNLRILEVRLNNLITLPKSMVRLVSLQRLDIGGNEFTELP 195



 Score = 40.8 bits (94), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 1/88 (1%)

Query: 5   SLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNA 64
           S    L+ +  L    NQL+ LP+ +   S+L VL V+ N L +LP+ I +   L+ LN 
Sbjct: 311 STIGSLVKLRFLFADDNQLRQLPDELCSCSQLSVLSVANNQLSALPQNIGHLGKLKVLNV 370

Query: 65  NFNKLRQLPDTIGFELINLKTLSINCNK 92
             N +  LP ++   L+NL +L ++ N+
Sbjct: 371 VNNYINALPVSM-LSLVNLTSLWLSDNQ 397



 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 2/77 (2%)

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
           + PE  ++   LE L++S     L+TLP  +     L  L V+ N + ++P +IG LR+L
Sbjct: 32  AFPEVWQHERTLEELHLSN--ARLQTLPPQLFYCQGLRVLQVNSNNLESIPQAIGSLRQL 89

Query: 178 QKLSLEGNPLVSPPMDV 194
           Q L L  N +V+ P ++
Sbjct: 90  QHLDLNRNLIVNVPEEI 106


>gi|418730499|ref|ZP_13288993.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774708|gb|EKR54712.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 631

 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 69/179 (38%), Positives = 107/179 (59%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  N+L  LPN IG L  L+ L +  N L + PK I   R+L+ LN   N+L  LP  
Sbjct: 99  LDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVE 158

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL+ L++  N++ +LP+ +  L +L+ L+ + N L +LP ++  L NL+ L +S
Sbjct: 159 IG-QLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLS 217

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +N   L T P  IG L +L EL++ +N++T LP  IG L+ L+ L L  N L + P ++
Sbjct: 218 EN--QLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEI 274



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 73/194 (37%), Positives = 111/194 (57%), Gaps = 4/194 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+P  +  RL N+  L ++ N+L   P  IG L  L+ L++  N L +LP  I   ++LE
Sbjct: 108 MLPNEI-GRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLE 166

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +LN   N+L  LP  IG +L NL+TL++  N++  LP  +  L +L+ L    N L + P
Sbjct: 167 KLNLRKNRLTVLPKEIG-QLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFP 225

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++  L NL+ LN+  N   L  LP  IG L +L  L++S N++TT P  IG L+KLQ L
Sbjct: 226 KEIGQLENLQELNLKWN--RLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDL 283

Query: 181 SLEGNPLVSPPMDV 194
            L  N L + P ++
Sbjct: 284 GLGRNQLTTFPKEI 297



 Score =  107 bits (266), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 75/186 (40%), Positives = 107/186 (57%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  LD+  NQL   P  I  L KL+ LD+S N L  LP  I   ++L+EL    NK
Sbjct: 69  QLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNK 128

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L   P  IG +L NL+TL++  N++  LP  +  L +L  L+ R N L  LP+++  L N
Sbjct: 129 LITFPKEIG-QLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQN 187

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ LN+  N   L TLP  IG L +L  L +S N++TT P  IG L  LQ+L+L+ N L 
Sbjct: 188 LQTLNLQDN--QLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLT 245

Query: 189 SPPMDV 194
           + P ++
Sbjct: 246 ALPKEI 251



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 111/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  NQL  LP  IG L  L+ L +S N L + PK I    +L+ELN  +N
Sbjct: 183 GQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWN 242

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L ++ N++   P+ +  L  L+ L    N L + P+++  L 
Sbjct: 243 RLTALPKEIG-QLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLK 301

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L++  N    +T+   IG L +L++L++SYN++ TLP  IG L+KLQ LSL  N L
Sbjct: 302 NLQMLDLCYN--QFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQL 359

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 360 TTLPKEI 366



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/174 (40%), Positives = 98/174 (56%), Gaps = 3/174 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           NQL  LP  IG L KL+ L +  N L +LPK I   ++L  L+   N+L  LP  IG +L
Sbjct: 334 NQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIG-QL 392

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            NL  L +  N++   P+ +  L +L+ LD   N L +LP+++  L NLE L +S+N   
Sbjct: 393 KNLYNLGLGRNQLTTFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSEN--Q 450

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L T P  IG L  L +L +SYN++  LP  IG L KLQ L L  N LV  P ++
Sbjct: 451 LTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRLVILPKEI 504



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 112/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+ +N+L  LP  IG L  L+ L++S N L + PK I   + L++L  ++N
Sbjct: 413 GQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYN 472

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L  L+ L ++ N++VILP+ +  L +L++LD   N  K++ +++  L 
Sbjct: 473 RLVILPKEIG-QLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLK 531

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  LN+S N   L TLP  IG L +L  LD+  N++TTLP  IG L+ L  L L  N L
Sbjct: 532 NLLQLNLSYN--QLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQL 589

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 590 TTLPKEI 596



 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 102/184 (55%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           LNV VL++       LP  I  L  L+ LD+  N L + P  I   + LE L+ + N+L 
Sbjct: 48  LNVRVLNLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLV 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ IG  L NL+ L +  NK++  P+ +  L +L+ L+ + N L +LP ++  L NLE
Sbjct: 108 MLPNEIG-RLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLE 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+ +N   L  LP  IG L +L  L++  N++ TLP  IG L+ LQ L L  N L + 
Sbjct: 167 KLNLRKN--RLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTF 224

Query: 191 PMDV 194
           P ++
Sbjct: 225 PKEI 228



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 104/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +LD+  NQ K +   IG L  L  L++S N L +LP  I   + L++L+   N
Sbjct: 298 GQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRN 357

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL  L +  N++  LP+ +  L +L  L    N L + P+++  L 
Sbjct: 358 QLTTLPKEIG-QLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLTTFPKEIGQLE 416

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++  N   L  LP  IG L +L  L++S N++TT P  IG L+KLQ L L  N L
Sbjct: 417 NLQELDLWNN--RLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRL 474

Query: 188 VSPPMDV 194
           V  P ++
Sbjct: 475 VILPKEI 481



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +  ++RVL+       +LP+++E L NL+ L++  N   L T P  I  L  L 
Sbjct: 40  LTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLRDN--QLATFPAVIVELQKLE 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LD+S N++  LP+ IG L+ LQ+L L  N L++ P ++
Sbjct: 98  SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEI 136



 Score = 40.8 bits (94), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 30/57 (52%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           NQL  LP  IG L  L  LD+  N L +LPK I   ++L  L    N+L  LP  IG
Sbjct: 541 NQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEIG 597


>gi|365922508|ref|ZP_09446706.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
 gi|364573058|gb|EHM50578.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
          Length = 429

 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 104/178 (58%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L+++ NQL  LP+S+  L +L  LD+ GNLL +LP++I    +L  L+A+ N
Sbjct: 209 GELTNLTELELYGNQLGTLPDSLSNLHQLYHLDIGGNLLTTLPESIGALENLSVLDAHNN 268

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP++IG  L  L  LS+  NK+  LP+  +HL  L  LD   N L +LP+ + N  
Sbjct: 269 RLTSLPESIG-NLQRLSCLSLAHNKLTRLPEQTSHLLRLSTLDLSYNNLMTLPDFVCNFS 327

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            L  L+++ N   L  LP  IG L  L  LDVS N + +LPDS+  L KL  L+L GN
Sbjct: 328 RLTNLHLAHN--ELTMLPMHIGYLGELEILDVSNNDLGSLPDSVAKLDKLTTLNLSGN 383



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/194 (37%), Positives = 116/194 (59%), Gaps = 6/194 (3%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+++   L+++  LD+  N+L+ LP SIG L+ LK LD+  N LE+LP +++N   L +
Sbjct: 66  LPDNI-GDLIHLTELDLRGNELETLPESIGNLTLLKRLDLKWNRLEALPNSLKNLTRLSK 124

Query: 62  LNANFNKLRQLPDTI-GFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           L   +N+L +LP+T+ GF  I    L I  N++  +P  L++ T+L  L+   N L+ LP
Sbjct: 125 LEFGYNQLTRLPETLAGFTQI--TELDIGDNRLTRVPHYLSNFTNLTKLNLARNQLEELP 182

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L +L  LN+S N   L+ LP  IG L +L EL++  N++ TLPDS+  L +L  L
Sbjct: 183 AFLGKLTHLTHLNLSAN--PLKQLPDFIGELTNLTELELYGNQLGTLPDSLSNLHQLYHL 240

Query: 181 SLEGNPLVSPPMDV 194
            + GN L + P  +
Sbjct: 241 DIGGNLLTTLPESI 254



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 99/176 (56%), Gaps = 3/176 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+   +L+ LP++IG L  L  LD+ GN LE+LP++I N   L+ L+  +N+L  LP++
Sbjct: 56  LDLSFRRLQSLPDNIGDLIHLTELDLRGNELETLPESIGNLTLLKRLDLKWNRLEALPNS 115

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           +   L  L  L    N++  LP++L   T +  LD   N L  +P  L N  NL  LN++
Sbjct: 116 LK-NLTRLSKLEFGYNQLTRLPETLAGFTQITELDIGDNRLTRVPHYLSNFTNLTKLNLA 174

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           +N   LE LP  +G L  L  L++S N +  LPD IG L  L +L L GN L + P
Sbjct: 175 RN--QLEELPAFLGKLTHLTHLNLSANPLKQLPDFIGELTNLTELELYGNQLGTLP 228



 Score = 97.1 bits (240), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 85/227 (37%), Positives = 112/227 (49%), Gaps = 19/227 (8%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L++  NQL+ LP  +G L+ L  L++S N L+ LP  I    +L EL    N+L  
Sbjct: 167 NLTKLNLARNQLEELPAFLGKLTHLTHLNLSANPLKQLPDFIGELTNLTELELYGNQLGT 226

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LPD++   L  L  L I  N +  LP+S+  L +L VLDA  N L SLPE + NL  L  
Sbjct: 227 LPDSLS-NLHQLYHLDIGGNLLTTLPESIGALENLSVLDAHNNRLTSLPESIGNLQRLSC 285

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L+++ N   L  LP     L+ L  LD+SYN + TLPD +    +L  L L  N L   P
Sbjct: 286 LSLAHN--KLTRLPEQTSHLLRLSTLDLSYNNLMTLPDFVCNFSRLTNLHLAHNELTMLP 343

Query: 192 MDVVEQGLSAVKGYLSE-----KMNNDHKSPKKKSWVGKLVKYGTFN 233
           M +         GYL E       NND  S      V KL K  T N
Sbjct: 344 MHI---------GYLGELEILDVSNNDLGSLPDS--VAKLDKLTTLN 379



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 78/145 (53%), Gaps = 3/145 (2%)

Query: 47  ESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSL 106
           + +P+       L  L+ +F +L+ LPD IG +LI+L  L +  N++  LP+S+ +LT L
Sbjct: 41  DRIPRDASELAGLGRLDLSFRRLQSLPDNIG-DLIHLTELDLRGNELETLPESIGNLTLL 99

Query: 107 RVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITT 166
           + LD + N L++LP  L+NL  L  L    N   L  LP ++     + ELD+  N++T 
Sbjct: 100 KRLDLKWNRLEALPNSLKNLTRLSKLEFGYN--QLTRLPETLAGFTQITELDIGDNRLTR 157

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPP 191
           +P  +     L KL+L  N L   P
Sbjct: 158 VPHYLSNFTNLTKLNLARNQLEELP 182



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 25/156 (16%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+ A L N+ VLD H+N+L  LP SIG L +L  L ++ N L  LP+   +   L  
Sbjct: 250 LPESIGA-LENLSVLDAHNNRLTSLPESIGNLQRLSCLSLAHNKLTRLPEQTSHLLRLST 308

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ ++N L  LPD +      L  L +  N++ +LP  + +L  L +LD   N L SLP+
Sbjct: 309 LDLSYNNLMTLPDFV-CNFSRLTNLHLAHNELTMLPMHIGYLGELEILDVSNNDLGSLPD 367

Query: 122 D-----------------------LENLINLEVLNI 134
                                   + NL +L +L++
Sbjct: 368 SVAKLDKLTTLNLSGNQIPFLPKFIANLTHLCILDV 403



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 3/126 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE  T+ LL +  LD+  N L  LP+ +   S+L  L ++ N L  LP  I     LE 
Sbjct: 296 LPEQ-TSHLLRLSTLDLSYNNLMTLPDFVCNFSRLTNLHLAHNELTMLPMHIGYLGELEI 354

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N L  LPD++  +L  L TL+++ N+I  LP+ + +LT L +LD R N    +P 
Sbjct: 355 LDVSNNDLGSLPDSVA-KLDKLTTLNLSGNQIPFLPKFIANLTHLCILDVR-NTRMKVPL 412

Query: 122 DLENLI 127
            L N I
Sbjct: 413 ALANRI 418


>gi|254410000|ref|ZP_05023780.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
 gi|196183036|gb|EDX78020.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1115

 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 70/195 (35%), Positives = 119/195 (61%), Gaps = 4/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+ ++L+N+  LD+  NQL  +P SI  L  L  LD+S N L  +P++I    +L +
Sbjct: 14  VPESI-SQLVNLTELDLSVNQLTQVPESISQLVNLTQLDLSHNQLTQVPESITQLVNLTK 72

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N+L Q+P++I  +L+NL  L+++ N++  + +S++ L +L  L    N L   PE
Sbjct: 73  LNLSVNQLTQVPESIS-QLVNLTKLNLSGNQLTQVSESISQLVNLTQLSLSGNQLTQFPE 131

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L+NL  L++S+N   L  +P SI  L++L +L++SYN++T +P+SI  L  L +L 
Sbjct: 132 SISQLVNLTQLSLSRN--QLTQVPESISQLVNLTQLNLSYNQLTQVPESISQLVNLTQLD 189

Query: 182 LEGNPLVSPPMDVVE 196
           L  N L   P  + +
Sbjct: 190 LSVNKLTQVPESISQ 204



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/195 (35%), Positives = 118/195 (60%), Gaps = 4/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+ ++L+N+  L++  NQL  +  SI  L  L  L +SGN L   P++I    +L +
Sbjct: 83  VPESI-SQLVNLTKLNLSGNQLTQVSESISQLVNLTQLSLSGNQLTQFPESISQLVNLTQ 141

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L Q+P++I  +L+NL  L+++ N++  +P+S++ L +L  LD  +N L  +PE
Sbjct: 142 LSLSRNQLTQVPESIS-QLVNLTQLNLSYNQLTQVPESISQLVNLTQLDLSVNKLTQVPE 200

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L+NL  LN+S N   L  +  SI  L++L +L +S NK+T + +SI  L  L +LS
Sbjct: 201 SISQLVNLTQLNLSYN--QLTQVSESISQLVNLTQLSLSGNKLTQVSESISQLVNLTQLS 258

Query: 182 LEGNPLVSPPMDVVE 196
           L GN L   P  + +
Sbjct: 259 LSGNKLTQVPESISQ 273



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 113/187 (60%), Gaps = 4/187 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+ ++L+N+  L++  NQL  +P SI  L  L  LD+S N L  +P++I    +L +
Sbjct: 152 VPESI-SQLVNLTQLNLSYNQLTQVPESISQLVNLTQLDLSVNKLTQVPESISQLVNLTQ 210

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN ++N+L Q+ ++I  +L+NL  LS++ NK+  + +S++ L +L  L    N L  +PE
Sbjct: 211 LNLSYNQLTQVSESIS-QLVNLTQLSLSGNKLTQVSESISQLVNLTQLSLSGNKLTQVPE 269

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L+NL  L++S N   L  +  SI  L++L +LD+S N++T + +SI  L  L +L 
Sbjct: 270 SISQLVNLTQLSLSDN--QLTQVSESISQLVNLTQLDLSSNQLTQVSESISQLVNLTQLD 327

Query: 182 LEGNPLV 188
           L  N L 
Sbjct: 328 LSSNQLT 334



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 115/192 (59%), Gaps = 5/192 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           + ES+ ++L+N+  L +  N+L  +P SI  L  L  L +S N L  + ++I    +L +
Sbjct: 244 VSESI-SQLVNLTQLSLSGNKLTQVPESISQLVNLTQLSLSDNQLTQVSESISQLVNLTQ 302

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L Q+ ++I  +L+NL  L ++ N++  + +S++ L +L  L+  +N L  +PE
Sbjct: 303 LDLSSNQLTQVSESIS-QLVNLTQLDLSSNQLTQVSESISQLVNLTQLNLSINKLTQVPE 361

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L+NL  LN+S N   L  +P SI  L++L +LD+  NKIT +PD +  L  L++L 
Sbjct: 362 SISQLVNLTWLNLSDN--QLTQVPESISQLVNLTQLDLFGNKITEIPDWLEELPNLKELD 419

Query: 182 LEGNPL-VSPPM 192
           L  NPL +SP +
Sbjct: 420 LRQNPLPISPEI 431



 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 67/195 (34%), Positives = 115/195 (58%), Gaps = 4/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+ ++L+N+  L++  NQL  +  SI  L  L  L +SGN L  + ++I    +L +
Sbjct: 198 VPESI-SQLVNLTQLNLSYNQLTQVSESISQLVNLTQLSLSGNKLTQVSESISQLVNLTQ 256

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + NKL Q+P++I  +L+NL  LS++ N++  + +S++ L +L  LD   N L  + E
Sbjct: 257 LSLSGNKLTQVPESIS-QLVNLTQLSLSDNQLTQVSESISQLVNLTQLDLSSNQLTQVSE 315

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L+NL  L++S N   L  +  SI  L++L +L++S NK+T +P+SI  L  L  L+
Sbjct: 316 SISQLVNLTQLDLSSN--QLTQVSESISQLVNLTQLNLSINKLTQVPESISQLVNLTWLN 373

Query: 182 LEGNPLVSPPMDVVE 196
           L  N L   P  + +
Sbjct: 374 LSDNQLTQVPESISQ 388



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 107/181 (59%), Gaps = 3/181 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L++  NQL  +P SI  L  L  LD+S N L  +P++I    +L +L+ + N+L Q+P++
Sbjct: 4   LNLSGNQLTQVPESISQLVNLTELDLSVNQLTQVPESISQLVNLTQLDLSHNQLTQVPES 63

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           I  +L+NL  L+++ N++  +P+S++ L +L  L+   N L  + E +  L+NL  L++S
Sbjct: 64  IT-QLVNLTKLNLSVNQLTQVPESISQLVNLTKLNLSGNQLTQVSESISQLVNLTQLSLS 122

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            N   L   P SI  L++L +L +S N++T +P+SI  L  L +L+L  N L   P  + 
Sbjct: 123 GN--QLTQFPESISQLVNLTQLSLSRNQLTQVPESISQLVNLTQLNLSYNQLTQVPESIS 180

Query: 196 E 196
           +
Sbjct: 181 Q 181



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 111/190 (58%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           + ES+ ++L+N+  L +  N+L  +  SI  L  L  L +SGN L  +P++I    +L +
Sbjct: 221 VSESI-SQLVNLTQLSLSGNKLTQVSESISQLVNLTQLSLSGNKLTQVPESISQLVNLTQ 279

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L Q+ ++I  +L+NL  L ++ N++  + +S++ L +L  LD   N L  + E
Sbjct: 280 LSLSDNQLTQVSESIS-QLVNLTQLDLSSNQLTQVSESISQLVNLTQLDLSSNQLTQVSE 338

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L+NL  LN+S N   L  +P SI  L++L  L++S N++T +P+SI  L  L +L 
Sbjct: 339 SISQLVNLTQLNLSIN--KLTQVPESISQLVNLTWLNLSDNQLTQVPESISQLVNLTQLD 396

Query: 182 LEGNPLVSPP 191
           L GN +   P
Sbjct: 397 LFGNKITEIP 406



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 80/139 (57%), Gaps = 2/139 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           + ES+ ++L+N+  LD+ SNQL  +  SI  L  L  L++S N L  +P++I    +L  
Sbjct: 313 VSESI-SQLVNLTQLDLSSNQLTQVSESISQLVNLTQLNLSINKLTQVPESISQLVNLTW 371

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N+L Q+P++I  +L+NL  L +  NKI  +P  L  L +L+ LD R N L   PE
Sbjct: 372 LNLSDNQLTQVPESIS-QLVNLTQLDLFGNKITEIPDWLEELPNLKELDLRQNPLPISPE 430

Query: 122 DLENLINLEVLNISQNFQY 140
            L +  + E  +I + F Y
Sbjct: 431 ILGSPYHQEPGSIEKIFNY 449


>gi|417782158|ref|ZP_12429891.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410777751|gb|EKR62396.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 447

 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 113/187 (60%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L++  NQL  +P  I  L  L+ L++  N L +L K I + ++L+EL+   N
Sbjct: 232 GKLRNLKILNLEDNQLMIIPKEIEQLENLQKLNLGRNQLTTLTKGIGDLQNLKELHLEIN 291

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NLK L++  N++  L   +  L +L+ LD R N L +LP+++  L 
Sbjct: 292 QLTTLPKEIG-KLQNLKILNLCNNELTTLSNGIGRLQNLQKLDLRFNQLTTLPKEIGKLQ 350

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+VL++  N   L TLP  IG L +L  LD+ YN++TTLP  IG L+ L++L+L  N L
Sbjct: 351 NLKVLDLYNN--QLTTLPKKIGKLQNLKVLDLDYNQLTTLPKEIGQLQNLRQLNLNHNQL 408

Query: 188 VSPPMDV 194
              P D+
Sbjct: 409 TILPKDI 415



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 111/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L+++ N+L  LP  IG L  L++L +  N L +LPK I   + L+ L+   N
Sbjct: 71  GKLQNLQELNLNYNKLTTLPEEIGQLQNLQILHLCENQLTTLPKEIGQLQRLQILHLAHN 130

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  LP+ IG +L NL+ L++N  ++  LP+ +  L  L+VL   LN   +LP+++  L 
Sbjct: 131 KLTTLPEEIG-QLQNLQELNLNGWQLSTLPKEIGKLQKLQVLSLDLNERTTLPKEIGQLQ 189

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L +  N   L  LP  I  L  L EL++++N++ TLP  IG LR L+ L+LE N L
Sbjct: 190 NLQILYLRAN--QLTNLPKEIIHLQKLQELNLNHNQLITLPKEIGKLRNLKILNLEDNQL 247

Query: 188 VSPPMDV 194
           +  P ++
Sbjct: 248 MIIPKEI 254



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/197 (37%), Positives = 117/197 (59%), Gaps = 4/197 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP+ +  +L N+  L++  NQL  L   IG L  LK L +  N L +LPK I   ++L+
Sbjct: 249 IIPKEI-EQLENLQKLNLGRNQLTTLTKGIGDLQNLKELHLEINQLTTLPKEIGKLQNLK 307

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            LN   N+L  L + IG  L NL+ L +  N++  LP+ +  L +L+VLD   N L +LP
Sbjct: 308 ILNLCNNELTTLSNGIG-RLQNLQKLDLRFNQLTTLPKEIGKLQNLKVLDLYNNQLTTLP 366

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           + +  L NL+VL++  ++  L TLP  IG L +L +L++++N++T LP  I  L+KL  L
Sbjct: 367 KKIGKLQNLKVLDL--DYNQLTTLPKEIGQLQNLRQLNLNHNQLTILPKDIEQLKKLNTL 424

Query: 181 SLEGNPLVSPPMDVVEQ 197
           SL  NP+ S  +  +++
Sbjct: 425 SLRNNPIASKEIKRIQK 441



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 113/188 (60%), Gaps = 4/188 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L N+ +L +  NQL  LP  IG L +L++L ++ N L +LP+ I   ++L+E
Sbjct: 89  LPEEI-GQLQNLQILHLCENQLTTLPKEIGQLQRLQILHLAHNKLTTLPEEIGQLQNLQE 147

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN N  +L  LP  IG +L  L+ LS++ N+   LP+ +  L +L++L  R N L +LP+
Sbjct: 148 LNLNGWQLSTLPKEIG-KLQKLQVLSLDLNERTTLPKEIGQLQNLQILYLRANQLTNLPK 206

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++ +L  L+ LN++ N   L TLP  IG L +L  L++  N++  +P  I  L  LQKL+
Sbjct: 207 EIIHLQKLQELNLNHN--QLITLPKEIGKLRNLKILNLEDNQLMIIPKEIEQLENLQKLN 264

Query: 182 LEGNPLVS 189
           L  N L +
Sbjct: 265 LGRNQLTT 272



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/181 (38%), Positives = 104/181 (57%), Gaps = 9/181 (4%)

Query: 17  DVHSNQLKCLPNSIGCLSKLKVLDV--SGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
            +H N  + L N     +++++LD+  + N L  LPK I   ++L+ELN N+NKL  LP+
Sbjct: 36  QIHRNLTEALQNP----NEVRILDLRNNDNELTVLPKEIGKLQNLQELNLNYNKLTTLPE 91

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            IG +L NL+ L +  N++  LP+ +  L  L++L    N L +LPE++  L NL+ LN+
Sbjct: 92  EIG-QLQNLQILHLCENQLTTLPKEIGQLQRLQILHLAHNKLTTLPEEIGQLQNLQELNL 150

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N   L TLP  IG L  L  L +  N+ TTLP  IG L+ LQ L L  N L + P ++
Sbjct: 151 --NGWQLSTLPKEIGKLQKLQVLSLDLNERTTLPKEIGQLQNLQILYLRANQLTNLPKEI 208

Query: 195 V 195
           +
Sbjct: 209 I 209


>gi|456875032|gb|EMF90266.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 664

 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/185 (41%), Positives = 118/185 (63%), Gaps = 4/185 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +   L N+  L+++SNQL  LP  IG L  L++L +S N L +LPK I   ++L+ 
Sbjct: 459 VPEEI-WNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQL 517

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+L  LP  IG +L NL+ L +  N++  LP+ + +L +L+VL+   N L +LP+
Sbjct: 518 LYLSDNQLTTLPKEIG-KLQNLQELYLRDNQLTTLPKEIGNLQNLQVLNLNHNRLTTLPK 576

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++ NL NL+VLN++ N   L TLP  IG L +L  L +  N++TTLP+ IG L+ L++L 
Sbjct: 577 EIGNLQNLQVLNLNHN--RLTTLPEEIGKLQNLQLLHLDNNQLTTLPEEIGKLQNLKELD 634

Query: 182 LEGNP 186
           L GNP
Sbjct: 635 LVGNP 639



 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/172 (40%), Positives = 104/172 (60%), Gaps = 3/172 (1%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELIN 82
           L  LP  IG L  L+ LD+S N L  LPK I   ++L++LN   N+L  LP+ IG +L N
Sbjct: 157 LWTLPKEIGKLQNLRDLDLSSNQLTILPKEIGKLQNLQKLNLTRNRLANLPEEIG-KLQN 215

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           L+ L +  N++  LP+ +  L +L++L+  +N L +LP+++ NL  L+ L +  N     
Sbjct: 216 LQELHLTRNRLANLPEEIGKLQNLQILNLGVNQLTTLPKEIGNLQKLQELYLGDN--QFA 273

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           TLP +IG L  L ELD+  N++TTLP  I  L+KLQ+L L  N L + P ++
Sbjct: 274 TLPKAIGKLQKLQELDLGINQLTTLPKEIEKLQKLQQLYLYSNRLANLPEEI 325



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 116/209 (55%), Gaps = 24/209 (11%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  N+L  LP  I  L KLK L  SGN   ++P+ I N ++L+ LN   N
Sbjct: 418 GKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSN 477

Query: 68  KLRQLPDTIGF----------------------ELINLKTLSINCNKIVILPQSLTHLTS 105
           +L  LP  IG                       +L NL+ L ++ N++  LP+ +  L +
Sbjct: 478 QLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDNQLTTLPKEIGKLQN 537

Query: 106 LRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
           L+ L  R N L +LP+++ NL NL+VLN++ N   L TLP  IG L +L  L++++N++T
Sbjct: 538 LQELYLRDNQLTTLPKEIGNLQNLQVLNLNHN--RLTTLPKEIGNLQNLQVLNLNHNRLT 595

Query: 166 TLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           TLP+ IG L+ LQ L L+ N L + P ++
Sbjct: 596 TLPEEIGKLQNLQLLHLDNNQLTTLPEEI 624



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 113/209 (54%), Gaps = 24/209 (11%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+ SNQL  LP  IG L  L+ L+++ N L +LP+ I   ++L+EL+   N
Sbjct: 165 GKLQNLRDLDLSSNQLTILPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQELHLTRN 224

Query: 68  KLRQLPDTIG----FELIN------------------LKTLSINCNKIVILPQSLTHLTS 105
           +L  LP+ IG     +++N                  L+ L +  N+   LP+++  L  
Sbjct: 225 RLANLPEEIGKLQNLQILNLGVNQLTTLPKEIGNLQKLQELYLGDNQFATLPKAIGKLQK 284

Query: 106 LRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
           L+ LD  +N L +LP+++E L  L+ L +  N   L  LP  I  L +L  L ++ N++T
Sbjct: 285 LQELDLGINQLTTLPKEIEKLQKLQQLYLYSN--RLANLPEEIEKLQNLQWLGLNNNQLT 342

Query: 166 TLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           TLP  IG L+KL+ L LE N L + P ++
Sbjct: 343 TLPKEIGKLQKLEALHLENNQLTTLPKEI 371



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 112/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + +NQL  LP  IG L  L+ L +  N L +LPK I   ++L+EL  ++N
Sbjct: 372 GKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDYN 431

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ I  +L  LK L  + N+   +P+ + +L +L+ L+   N L SLP+++ NL 
Sbjct: 432 RLTTLPEEIE-KLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQ 490

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L +S N   L TLP  IG L +L  L +S N++TTLP  IG L+ LQ+L L  N L
Sbjct: 491 NLQLLYLSDN--QLATLPKEIGKLQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLRDNQL 548

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 549 TTLPKEI 555



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 104/186 (55%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L  +  L ++SN+L  LP  I  L  L+ L ++ N L +LPK I   + LE L+   N+
Sbjct: 304 KLQKLQQLYLYSNRLANLPEEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQ 363

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG +L NL+ L ++ N++  LP+ +  L  L+ L    N L +LP+++  L N
Sbjct: 364 LTTLPKEIG-KLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQN 422

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +  ++  L TLP  I  L  L +L  S N+ TT+P+ I  L+ LQ L+L  N L 
Sbjct: 423 LQELRL--DYNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLT 480

Query: 189 SPPMDV 194
           S P ++
Sbjct: 481 SLPKEI 486



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 60/153 (39%), Positives = 92/153 (60%), Gaps = 3/153 (1%)

Query: 42  SGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLT 101
           S + L +LPK I   ++L +L+ + N+L  LP  IG +L NL+ L++  N++  LP+ + 
Sbjct: 153 SNDPLWTLPKEIGKLQNLRDLDLSSNQLTILPKEIG-KLQNLQKLNLTRNRLANLPEEIG 211

Query: 102 HLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSY 161
            L +L+ L    N L +LPE++  L NL++LN+  N   L TLP  IG L  L EL +  
Sbjct: 212 KLQNLQELHLTRNRLANLPEEIGKLQNLQILNLGVN--QLTTLPKEIGNLQKLQELYLGD 269

Query: 162 NKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           N+  TLP +IG L+KLQ+L L  N L + P ++
Sbjct: 270 NQFATLPKAIGKLQKLQELDLGINQLTTLPKEI 302


>gi|170032991|ref|XP_001844363.1| leucine-rich repeat protein SHOC-2 [Culex quinquefasciatus]
 gi|261277883|sp|B0W6M9.1|SUR8_CULQU RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|167873320|gb|EDS36703.1| leucine-rich repeat protein SHOC-2 [Culex quinquefasciatus]
          Length = 628

 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 111/177 (62%), Gaps = 3/177 (1%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           ++ N++  LP  IGCLS LK L ++ N L SLP +++N ++L+ L+   NKL ++PD I 
Sbjct: 177 LYGNKISSLPVEIGCLSNLKTLALNENSLTSLPDSLQNLKALKVLDLRHNKLSEIPDVI- 235

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
           ++L  L TL +  N+I ++  +L +L+SL +L  R N +  LP  + +L NL  L++S N
Sbjct: 236 YKLHTLTTLYLRFNRIKVVGDNLKNLSSLTMLSLRENKIHELPAAIGHLRNLTTLDLSHN 295

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +L+ LP +IG  ++L  LD+ +N +  +P++IG L  LQ+L L  N L + P+ +
Sbjct: 296 --HLKHLPEAIGNCVNLTALDLQHNDLLDIPETIGNLANLQRLGLRYNQLTAIPVSL 350



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 99/182 (54%), Gaps = 3/182 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+  L ++ N L  LP+S+  L  LKVLD+  N L  +P  I    +L  L   FN++
Sbjct: 192 LSNLKTLALNENSLTSLPDSLQNLKALKVLDLRHNKLSEIPDVIYKLHTLTTLYLRFNRI 251

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           + + D +   L +L  LS+  NKI  LP ++ HL +L  LD   N LK LPE + N +NL
Sbjct: 252 KVVGDNLK-NLSSLTMLSLRENKIHELPAAIGHLRNLTTLDLSHNHLKHLPEAIGNCVNL 310

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
             L++  N   L  +P +IG L +L  L + YN++T +P S+     + + ++EGN +  
Sbjct: 311 TALDLQHN--DLLDIPETIGNLANLQRLGLRYNQLTAIPVSLRNCIHMDEFNVEGNSISQ 368

Query: 190 PP 191
            P
Sbjct: 369 LP 370



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 51/241 (21%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE++    +N+  LD+  N L  +P +IG L+ L+ L +  N L ++P ++ NC  ++E
Sbjct: 300 LPEAI-GNCVNLTALDLQHNDLLDIPETIGNLANLQRLGLRYNQLTAIPVSLRNCIHMDE 358

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQS----LTHLTSLRV--------- 108
            N   N + QLPD +   L NL T++++ N     P       T++TS+ +         
Sbjct: 359 FNVEGNSISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNVTSINMEHNQIDKIQ 418

Query: 109 -----------------------------------LDARLNCLKSLPEDLENLINLEVLN 133
                                              L+   N L  LP+D+  L NLE+L 
Sbjct: 419 YGIFSRAKGLTKLNMKENALTSLPLDIGTWSQMVELNFGTNSLAKLPDDIHCLQNLEILI 478

Query: 134 ISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMD 193
           +S N   L+ +P +IG L  L  LD+  N++ +LP  IG L  LQKL L+ N L S P  
Sbjct: 479 LSNNM--LKRIPNTIGNLKKLRVLDLEENRLESLPSEIGLLHDLQKLILQSNALQSLPRT 536

Query: 194 V 194
           +
Sbjct: 537 I 537



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 90/159 (56%), Gaps = 2/159 (1%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +V L+  +N L  LP+ I CL  L++L +S N+L+ +P TI N + L  L+   N+L  L
Sbjct: 451 MVELNFGTNSLAKLPDDIHCLQNLEILILSNNMLKRIPNTIGNLKKLRVLDLEENRLESL 510

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P  IG  L +L+ L +  N +  LP+++ HLT+L  L    N L+ LPE++  L NLE L
Sbjct: 511 PSEIGL-LHDLQKLILQSNALQSLPRTIGHLTNLTYLSVGENNLQYLPEEIGTLENLESL 569

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
            I+ N   ++ LPY + L  +L  + +    ++ LP  +
Sbjct: 570 YINDNASLVK-LPYELALCQNLAIMSIENCPLSALPPEV 607



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 110/229 (48%), Gaps = 28/229 (12%)

Query: 3   PESLTARLLNVVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEE 61
           P    A+  NV  +++  NQ+  +   I   +K L  L++  N L SLP  I     + E
Sbjct: 394 PSGGPAQFTNVTSINMEHNQIDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGTWSQMVE 453

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N L +LPD I   L NL+ L ++ N +  +P ++ +L  LRVLD   N L+SLP 
Sbjct: 454 LNFGTNSLAKLPDDIHC-LQNLEILILSNNMLKRIPNTIGNLKKLRVLDLEENRLESLPS 512

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL- 180
           ++  L +L+ L +  N   L++LP +IG L +L  L V  N +  LP+ IG L  L+ L 
Sbjct: 513 EIGLLHDLQKLILQSN--ALQSLPRTIGHLTNLTYLSVGENNLQYLPEEIGTLENLESLY 570

Query: 181 -----------------------SLEGNPLVSPPMDVVEQGLSAVKGYL 206
                                  S+E  PL + P +VV  G S V  YL
Sbjct: 571 INDNASLVKLPYELALCQNLAIMSIENCPLSALPPEVVGGGPSLVIQYL 619



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 101/229 (44%), Gaps = 48/229 (20%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L ++ +L +  N++  LP +IG L  L  LD+S N L+ LP+ I NC +L  L+   N L
Sbjct: 261 LSSLTMLSLRENKIHELPAAIGHLRNLTTLDLSHNHLKHLPEAIGNCVNLTALDLQHNDL 320

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLIN 128
             +P+TIG  L NL+ L +  N++  +P SL +   +   +   N +  LP+  L +L N
Sbjct: 321 LDIPETIG-NLANLQRLGLRYNQLTAIPVSLRNCIHMDEFNVEGNSISQLPDGLLASLSN 379

Query: 129 LEVLNISQN----------------------------FQY------------------LE 142
           L  + +S+N                             QY                  L 
Sbjct: 380 LTTITLSRNAFHSYPSGGPAQFTNVTSINMEHNQIDKIQYGIFSRAKGLTKLNMKENALT 439

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           +LP  IG    +VEL+   N +  LPD I CL+ L+ L L  N L   P
Sbjct: 440 SLPLDIGTWSQMVELNFGTNSLAKLPDDIHCLQNLEILILSNNMLKRIP 488



 Score = 39.3 bits (90), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 2/63 (3%)

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLS 200
           +  +P S+    SL+E  +  NKI++LP  IGCL  L+ L+L  N L S P  +  Q L 
Sbjct: 159 ITVIPPSVKDCTSLIEFYLYGNKISSLPVEIGCLSNLKTLALNENSLTSLPDSL--QNLK 216

Query: 201 AVK 203
           A+K
Sbjct: 217 ALK 219


>gi|321472408|gb|EFX83378.1| hypothetical protein DAPPUDRAFT_315899 [Daphnia pulex]
          Length = 630

 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 67/174 (38%), Positives = 99/174 (56%), Gaps = 3/174 (1%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           ++ N+L CLP  IGCL  L  L +S N L  LP ++ N R L  L+   NKL  +PD + 
Sbjct: 179 LYGNKLACLPPEIGCLVNLSTLALSENSLTGLPDSLANLRCLRVLDLRHNKLHDIPDVV- 237

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
           ++L +L TL +  N+I ++   +  LT L +L  R N ++ LP  +  L NL   ++S N
Sbjct: 238 YKLHSLTTLFLRFNRIRVVGDEIRQLTHLTMLSLRENKIRELPAGIGRLTNLITFDVSHN 297

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
             +LE LP  IG  + L  LD+ +N++  +P+SIG LR L +L L  N L S P
Sbjct: 298 --HLEHLPEEIGNCVQLSSLDLQHNELLDIPESIGQLRNLNRLGLRYNRLTSVP 349



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 27/204 (13%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD- 74
           LD+  N+L  +P SIG L  L  L +  N L S+P+++ NC  ++E N   N +  LPD 
Sbjct: 315 LDLQHNELLDIPESIGQLRNLNRLGLRYNRLTSVPRSLSNCVHMDEFNVEGNAISHLPDG 374

Query: 75  ---------TIGF--------------ELINLKTLSINCNKIVILPQSL-THLTSLRVLD 110
                    +I F              + IN+ ++++  N++  +P  + +    L  L+
Sbjct: 375 LLSSLSQLTSITFSRNSFTAYPSGGPSQFINVHSINLEHNQVDKIPYGIFSRAKHLAKLN 434

Query: 111 ARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDS 170
            + N L SLP D+   +N+  LN+  N   L  +P  I LL SL  L +S N +  +P+S
Sbjct: 435 MKENLLTSLPLDIGTWVNMVELNLGTN--QLNKVPDDIALLQSLEVLILSNNNLKRVPNS 492

Query: 171 IGCLRKLQKLSLEGNPLVSPPMDV 194
           IG LRKL+ L LE N L + P ++
Sbjct: 493 IGNLRKLRVLDLEENKLETLPNEI 516



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 119/239 (49%), Gaps = 30/239 (12%)

Query: 3   PESLTARLLNVVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEE 61
           P    ++ +NV  +++  NQ+  +P  I   +K L  L++  NLL SLP  I    ++ E
Sbjct: 396 PSGGPSQFINVHSINLEHNQVDKIPYGIFSRAKHLAKLNMKENLLTSLPLDIGTWVNMVE 455

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N+L ++PD I   L +L+ L ++ N +  +P S+ +L  LRVLD   N L++LP 
Sbjct: 456 LNLGTNQLNKVPDDIAL-LQSLEVLILSNNNLKRVPNSIGNLRKLRVLDLEENKLETLPN 514

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLR------ 175
           ++  L +L+ L +  N   L +LP ++G L +L  L V  N ++ +P+ IG L       
Sbjct: 515 EIGFLRDLKKLIVQSN--QLTSLPRAVGHLSNLTYLSVGENNLSYIPEEIGTLETLESLY 572

Query: 176 ------------------KLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKS 216
                              LQ +S+E  PL   P ++V  G S V  +L  KM   ++S
Sbjct: 573 LNDNLNLHNLPFELALCSSLQIMSIENCPLSQIPAEIVGGGPSLVIQFL--KMQGPYRS 629



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 63/105 (60%), Gaps = 2/105 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ + A L ++ VL + +N LK +PNSIG L KL+VLD+  N LE+LP  I   R L++
Sbjct: 466 VPDDI-ALLQSLEVLILSNNNLKRVPNSIGNLRKLRVLDLEENKLETLPNEIGFLRDLKK 524

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSL 106
           L    N+L  LP  +G  L NL  LS+  N +  +P+ +  L +L
Sbjct: 525 LIVQSNQLTSLPRAVG-HLSNLTYLSVGENNLSYIPEEIGTLETL 568


>gi|421119262|ref|ZP_15579586.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347892|gb|EKO98743.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 738

 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 76/186 (40%), Positives = 106/186 (56%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  LD+  NQL   P  I  L KL+ LD+S N L  LP  I   ++L+EL    NK
Sbjct: 69  QLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNK 128

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L   P  IG +L NL+TL++  N++  LP  +  L +L  L+ R N L  LP+++  L N
Sbjct: 129 LITFPKEIG-QLQNLQTLNLQDNQLATLPVEIGRLQNLEKLNLRKNRLTVLPKEIGQLQN 187

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ LN+  N   L TLP  IG L +L  L +S N++TT P  IG L  LQ+L L GN L 
Sbjct: 188 LQTLNLQDN--QLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLK 245

Query: 189 SPPMDV 194
           + P ++
Sbjct: 246 TLPKEI 251



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 106/189 (56%), Gaps = 17/189 (8%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  NQL  LP  IG L  L+ L +S N L + PK I    +L+EL+ N N
Sbjct: 183 GQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGN 242

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG +L  L+ L+++ N+I  LP+               N L +LP ++  L 
Sbjct: 243 QLKTLPKEIG-QLQKLEKLNLDGNQITTLPKG--------------NQLTTLPAEIGQLK 287

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L++S  +  L TLP  IG L +L  LD+  N++TTLP  I  L+ L++L L GN L
Sbjct: 288 NLQILSLS--YNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKL 345

Query: 188 VSPPMDVVE 196
              P ++ E
Sbjct: 346 TIVPKEIWE 354



 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 114/223 (51%), Gaps = 30/223 (13%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+P  +  RL N+  L ++ N+L   P  IG L  L+ L++  N L +LP  I   ++LE
Sbjct: 108 MLPNEI-GRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGRLQNLE 166

Query: 61  ELNANFNKLRQLPDTIG----------------------FELINLKTLSINCNKIVILPQ 98
           +LN   N+L  LP  IG                       +L NL+TL ++ N++   P+
Sbjct: 167 KLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPK 226

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN-------FQYLETLPYSIGLL 151
            +  L +L+ LD   N LK+LP+++  L  LE LN+  N          L TLP  IG L
Sbjct: 227 EIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQL 286

Query: 152 MSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            +L  L +SYN++ TLP  IG L+ L+ L L GN L + P ++
Sbjct: 287 KNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREI 329



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/189 (39%), Positives = 107/189 (56%), Gaps = 10/189 (5%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTI---ENCRSLEELNAN 65
           RL N+  L ++   L  LP  I  L  L+ L +  N L+SLPK I    N RSL+ + AN
Sbjct: 543 RLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLD-IGAN 601

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
            N+   LP  I   L NL++L +N N+  I P+ +  L  L +L+   N L +LPE +  
Sbjct: 602 -NEFEVLPKEIA-RLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 659

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L  L++L++S N   L TLP  IG L +L EL + YN+I  LP+ I  L+ L+KL+L  N
Sbjct: 660 LKGLQMLDLSHN--RLTTLPSEIGQLHNLTELYLQYNRIKMLPEEIARLQNLRKLTLYEN 717

Query: 186 PLVSPPMDV 194
           P+  PP ++
Sbjct: 718 PI--PPQEL 724



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 102/184 (55%), Gaps = 3/184 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L +  N+L  LP  IG L  LK LD+ GN L +LP+ I   ++L+EL  N N
Sbjct: 284 GQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGN 343

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  +P  I +EL NL  L +  N+I  LP+ +    +L+ L+ R N L +LP ++    
Sbjct: 344 KLTIVPKEI-WELENLTILQLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIG--E 400

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
              +  ++     ++ LP  IG L +L   ++S NK+ ++P  IG L+ L+ L LE N L
Sbjct: 401 LKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQL 460

Query: 188 VSPP 191
            + P
Sbjct: 461 KTLP 464



 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 1/102 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ARL N+  L ++ N+ K  P  I  L KL +L+V+ N L++LP+ I   + L+ L+ + N
Sbjct: 612 ARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHN 671

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           +L  LP  IG +L NL  L +  N+I +LP+ +  L +LR L
Sbjct: 672 RLTTLPSEIG-QLHNLTELYLQYNRIKMLPEEIARLQNLRKL 712



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 3/94 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +V+L+V++NQL  LP  IG L  L++LD+S N L +LP  I    +L EL   +N+++ L
Sbjct: 640 LVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKML 699

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSL 106
           P+ I   L NL+ L++  N I   PQ L  +  L
Sbjct: 700 PEEIA-RLQNLRKLTLYENPIP--PQELDKIRKL 730



 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +  ++R+LD       +LP+++E L NL+ L++  N   L T P  I  L  L 
Sbjct: 40  LTKALQNPLNVRILDLSGQNFTTLPKEIEQLKNLQELDLGDN--QLATFPAVIVELQKLE 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LD+S N++  LP+ IG L+ LQ+L L  N L++ P ++
Sbjct: 98  SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEI 136


>gi|218440192|ref|YP_002378521.1| small GTP-binding protein [Cyanothece sp. PCC 7424]
 gi|218172920|gb|ACK71653.1| small GTP-binding protein [Cyanothece sp. PCC 7424]
          Length = 867

 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 109/186 (58%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L ++  LD+ +N+L  LP  IG L KL  L+++ N L +LP  I    +L  L+ ++NK
Sbjct: 37  QLTHLRYLDLRNNKLTTLPPQIGKLKKLTSLNLTDNQLSALPPEIGQLNNLSRLHLSYNK 96

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP+ IG +L +L  L ++ N +  LP +L HL ++  L    N   SLP  ++ LI+
Sbjct: 97  LTNLPEEIG-QLTHLSELYLSHNFLETLPTTLNHLVNINRLSLSYNQFTSLPPQIKGLIS 155

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L   +++ N   L TLP  IG L SL +LD+ YN++TTLP  IG L +L  L +  N L+
Sbjct: 156 LSWWDLNNN--QLTTLPPEIGQLKSLNQLDLGYNQLTTLPPEIGELYRLTSLDVSYNQLI 213

Query: 189 SPPMDV 194
           S P ++
Sbjct: 214 SLPPEI 219



 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 106/188 (56%), Gaps = 3/188 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
            L+N+  L +  NQ   LP  I  L  L   D++ N L +LP  I   +SL +L+  +N+
Sbjct: 129 HLVNINRLSLSYNQFTSLPPQIKGLISLSWWDLNNNQLTTLPPEIGQLKSLNQLDLGYNQ 188

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG EL  L +L ++ N+++ LP  +  L +L  L    N L +LP ++  L N
Sbjct: 189 LTTLPPEIG-ELYRLTSLDVSYNQLISLPPEIQFLINLDSLTLSNNQLATLPPEIGFLSN 247

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L  LN+S N   L ++P  IG L  L++  +S+NKI TLP  I CL +L  L L+ N L+
Sbjct: 248 LISLNLSYN--QLTSIPPEIGQLTKLIQFRLSHNKIETLPPEIRCLTQLTSLMLKNNQLL 305

Query: 189 SPPMDVVE 196
           + P+++++
Sbjct: 306 ALPLELIQ 313



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 87/161 (54%), Gaps = 3/161 (1%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
            K + LD+S   LE+LP  IE    L  L+   NKL  LP  IG +L  L +L++  N++
Sbjct: 16  EKAETLDLSFKKLETLPPQIEQLTHLRYLDLRNNKLTTLPPQIG-KLKKLTSLNLTDNQL 74

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
             LP  +  L +L  L    N L +LPE++  L +L  L +S NF  LETLP ++  L++
Sbjct: 75  SALPPEIGQLNNLSRLHLSYNKLTNLPEEIGQLTHLSELYLSHNF--LETLPTTLNHLVN 132

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +  L +SYN+ T+LP  I  L  L    L  N L + P ++
Sbjct: 133 INRLSLSYNQFTSLPPQIKGLISLSWWDLNNNQLTTLPPEI 173



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 75/164 (45%), Gaps = 23/164 (14%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L  +  LDV  NQL  LP  I  L  L  L +S N L +LP  I    +L  LN ++N
Sbjct: 197 GELYRLTSLDVSYNQLISLPPEIQFLINLDSLTLSNNQLATLPPEIGFLSNLISLNLSYN 256

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  IG +L  L    ++ NKI  LP  +  LT L  L  + N L +LP       
Sbjct: 257 QLTSIPPEIG-QLTKLIQFRLSHNKIETLPPEIRCLTQLTSLMLKNNQLLALP------- 308

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
            LE++ + Q F+              L +LDV  N +T  P+ I
Sbjct: 309 -LELIQLVQFFK--------------LTQLDVQENLLTIPPEII 337


>gi|456971330|gb|EMG11963.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Grippotyphosa str. LT2186]
          Length = 349

 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 111/184 (60%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL +   +L  LP  I  L  LK+LD+  N L +LPK I   ++L+ L   +N+L 
Sbjct: 46  LDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLT 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG +L NLK L +N N++  LP  +  L +L++LD   N L +LP+++  L NL+
Sbjct: 106 ALPKEIG-QLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQ 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
           +L++ ++   L  LP  IG L +L ELD+S+N++T LP  IG L+ LQ+  L+ N L   
Sbjct: 165 LLSLYES--QLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTIL 222

Query: 191 PMDV 194
           P ++
Sbjct: 223 PKEI 226



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/227 (37%), Positives = 124/227 (54%), Gaps = 11/227 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L ++ NQL  LP  IG L  LKVL ++ N L +LP  I   ++L+ L+   N
Sbjct: 89  GQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNN 148

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ LS+  +++ ILPQ +  L +L  LD   N L  LP+++  L 
Sbjct: 149 QLTTLPKEIG-KLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQ 207

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+   +  N   L  LP  IG L +L EL + +N++T LP  IG L+ LQ+  L+ N  
Sbjct: 208 NLQRFVLDNN--QLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQF 265

Query: 188 VSPPMDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFN 233
              P ++ + Q L  +  YLS   N     PK+   +GKL K  T N
Sbjct: 266 TILPKEIGQLQNLQEL--YLS--YNQLTTFPKE---IGKLQKLQTLN 305



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 108/186 (58%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ +LD+ +NQL  LP  IG L  L++L +  + L  LP+ I   ++L EL+ + N+
Sbjct: 136 QLKNLQMLDLGNNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQ 195

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG +L NL+   ++ N++ ILP+ +  L +L  L    N L  LP+++  L N
Sbjct: 196 LTILPKEIG-QLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQN 254

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+   +  N      LP  IG L +L EL +SYN++TT P  IG L+KLQ L+L  N L 
Sbjct: 255 LQRFVLDNN--QFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLT 312

Query: 189 SPPMDV 194
           + P ++
Sbjct: 313 TLPEEI 318



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 106/189 (56%), Gaps = 7/189 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L ++ +QL  LP  IG L  L  LD+S N L  LPK I   ++L+    + N
Sbjct: 158 GKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNN 217

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR--VLDARLNCLKSLPEDLEN 125
           +L  LP  IG +L NL  L +  N++ ILP+ +  L +L+  VLD   N    LP+++  
Sbjct: 218 QLTILPKEIG-KLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDN--NQFTILPKEIGQ 274

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L NL+ L +S N   L T P  IG L  L  L++  N++TTLP+ I  L+ L+ L+L  N
Sbjct: 275 LQNLQELYLSYN--QLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSEN 332

Query: 186 PLVSPPMDV 194
            L + P ++
Sbjct: 333 QLKTIPQEI 341



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 97/177 (54%), Gaps = 4/177 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +  +L N+  LD+  NQL  LP  IG L  L+   +  N L  LPK I   ++L 
Sbjct: 175 ILPQEI-GKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLH 233

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL    N+L  LP  IG +L NL+   ++ N+  ILP+ +  L +L+ L    N L + P
Sbjct: 234 ELYLGHNQLTILPKEIG-QLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFP 292

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
           +++  L  L+ LN+  N   L TLP  I  L +L  L++S N++ T+P  IG L+ L
Sbjct: 293 KEIGKLQKLQTLNLWNN--QLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNL 347



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 70/123 (56%), Gaps = 1/123 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  NQL  LP  IG L  L+   +  N    LPK I   ++L+EL  ++N
Sbjct: 227 GKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYN 286

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L   P  IG +L  L+TL++  N++  LP+ +  L +L+ L+   N LK++P+++  L 
Sbjct: 287 QLTTFPKEIG-KLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQ 345

Query: 128 NLE 130
           NL+
Sbjct: 346 NLK 348



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 1/78 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  NQL   P  IG L KL+ L++  N L +LP+ IE  ++L+ LN + N
Sbjct: 273 GQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSEN 332

Query: 68  KLRQLPDTIGFELINLKT 85
           +L+ +P  IG +L NLK+
Sbjct: 333 QLKTIPQEIG-QLQNLKS 349



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVL      L +LP++++ L NL++L++  N   L  LP  IG L +L 
Sbjct: 38  LTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHN--QLTALPKEIGQLKNLQ 95

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L + YN++T LP  IG L+ L+ L L  N L + P ++
Sbjct: 96  LLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEI 134


>gi|418707299|ref|ZP_13268125.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772346|gb|EKR47534.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 400

 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 111/184 (60%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL +   +L  LP  I  L  LK+LD+  N L +LPK I   ++L+ L   +N+L 
Sbjct: 46  LDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLT 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG +L NLK L +N N++  LP  +  L +L++LD   N L +LP+++  L NL+
Sbjct: 106 ALPKEIG-QLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQ 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
           +L++ ++   L  LP  IG L +L ELD+S+N++T LP  IG L+ LQ+  L+ N L   
Sbjct: 165 LLSLYES--QLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTIL 222

Query: 191 PMDV 194
           P ++
Sbjct: 223 PKEI 226



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/227 (37%), Positives = 124/227 (54%), Gaps = 11/227 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L ++ NQL  LP  IG L  LKVL ++ N L +LP  I   ++L+ L+   N
Sbjct: 89  GQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNN 148

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ LS+  +++ ILPQ +  L +L  LD   N L  LP+++  L 
Sbjct: 149 QLTTLPKEIG-KLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQ 207

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+   +  N   L  LP  IG L +L EL + +N++T LP  IG L+ LQ+  L+ N  
Sbjct: 208 NLQRFVLDNN--QLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQF 265

Query: 188 VSPPMDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFN 233
              P ++ + Q L  +  YLS   N     PK+   +GKL K  T N
Sbjct: 266 TILPKEIGQLQNLQEL--YLS--YNQLTTFPKE---IGKLQKLQTLN 305



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 108/186 (58%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ +LD+ +NQL  LP  IG L  L++L +  + L  LP+ I   ++L EL+ + N+
Sbjct: 136 QLKNLQMLDLGNNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQ 195

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG +L NL+   ++ N++ ILP+ +  L +L  L    N L  LP+++  L N
Sbjct: 196 LTILPKEIG-QLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQN 254

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+   +  N      LP  IG L +L EL +SYN++TT P  IG L+KLQ L+L  N L 
Sbjct: 255 LQRFVLDNN--QFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLT 312

Query: 189 SPPMDV 194
           + P ++
Sbjct: 313 TLPEEI 318



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/227 (33%), Positives = 116/227 (51%), Gaps = 25/227 (11%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +  +L N+  LD+  NQL  LP  IG L  L+   +  N L  LPK I   ++L 
Sbjct: 175 ILPQEI-GKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLH 233

Query: 61  ELNANFNKLRQLPDTIGF----------------------ELINLKTLSINCNKIVILPQ 98
           EL    N+L  LP  IG                       +L NL+ L ++ N++   P+
Sbjct: 234 ELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPK 293

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
            +  L  L+ L+   N L +LPE++E L NL+ LN+S+N   L+T+P  IG L +L  LD
Sbjct: 294 EIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSEN--QLKTIPQEIGQLQNLKSLD 351

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGY 205
           +S N++TTLP  I  L+ LQ L+L  N   S   + + + L   + Y
Sbjct: 352 LSNNQLTTLPKEIEQLKNLQTLNLWNNQFSSQEKEKIRKLLPKCQIY 398



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVL      L +LP++++ L NL++L++  N   L  LP  IG L +L 
Sbjct: 38  LTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHN--QLTALPKEIGQLKNLQ 95

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L + YN++T LP  IG L+ L+ L L  N L + P ++
Sbjct: 96  LLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEI 134


>gi|417761876|ref|ZP_12409877.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417776956|ref|ZP_12424785.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418673273|ref|ZP_13234595.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409942287|gb|EKN87903.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410573245|gb|EKQ36298.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410579766|gb|EKQ47605.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 374

 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 116/208 (55%), Gaps = 22/208 (10%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  +  L++  NQ+K LP  I  L KL+ L +  N L +LP+ IE  + LE L  + N
Sbjct: 132 GKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNN 191

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NLK L +N N++  LPQ + HL +L+ L    N L ++P+++  L 
Sbjct: 192 QLTTLPQEIG-QLQNLKVLFLNNNQLTTLPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQ 250

Query: 128 NLEVLNIS--------------QNFQYL-------ETLPYSIGLLMSLVELDVSYNKITT 166
           NL++L++               QN Q+L        T+P  IG L +L EL +S N++TT
Sbjct: 251 NLQMLDLGNNQLTILPKEIGKLQNLQWLYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTT 310

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +P  IG L+ LQ+L L  N L++ P ++
Sbjct: 311 IPKEIGQLQNLQELYLSNNQLITIPKEI 338



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/180 (38%), Positives = 105/180 (58%), Gaps = 3/180 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +LD+  NQL  LP  I  L  L++LD+S N +  LPK I   ++L+ L+   N+L  LP 
Sbjct: 1   MLDLSDNQLIILPKEIRQLKNLQMLDLSDNQIIILPKEIRQLKNLQMLDLRSNQLTILPK 60

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            IG +L NL+ L ++ N++   P+ +  L  L+ L+   N +K++P+++E L  L+ L +
Sbjct: 61  EIG-KLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYL 119

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N   L TLP  IG L  L  L++SYN+I TLP  I  L+KLQ L L  N L + P ++
Sbjct: 120 PNN--QLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEI 177



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 107/186 (57%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ +LD+ SNQL  LP  IG L  L+ L +S N L + PK I   + L+ LN + N+
Sbjct: 41  QLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQ 100

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           ++ +P  I  +L  L++L +  N++  LPQ +  L  L+ L+   N +K+LP+++E L  
Sbjct: 101 IKTIPKEIE-KLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQK 159

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L + +N   L TLP  I  L  L  L +  N++TTLP  IG L+ L+ L L  N L 
Sbjct: 160 LQWLYLHKN--QLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLT 217

Query: 189 SPPMDV 194
           + P ++
Sbjct: 218 TLPQEI 223



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 66/170 (38%), Positives = 102/170 (60%), Gaps = 3/170 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L + +NQL  LP  IG L  LKVL ++ N L +LP+ I + ++L++L    N+L  +P  
Sbjct: 186 LGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTLPQEIGHLQNLQDLYLVSNQLTTIPKE 245

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL+ L +  N++ ILP+ +  L +L+ L    N L ++P+++  L NL+ L +S
Sbjct: 246 IG-QLQNLQMLDLGNNQLTILPKEIGKLQNLQWLYLSNNQLTTIPKEIGQLQNLQELYLS 304

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            N   L T+P  IG L +L EL +S N++ T+P  IG L+ LQ L L  N
Sbjct: 305 NN--QLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNN 352



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 107/186 (57%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ +LD+  NQ+  LP  I  L  L++LD+  N L  LPK I   ++L+EL  + N+
Sbjct: 18  QLKNLQMLDLSDNQIIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQ 77

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L   P  IG +L  L+ L+++ N+I  +P+ +  L  L+ L    N L +LP+++  L  
Sbjct: 78  LTTFPKEIG-KLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQK 136

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ LN+S  +  ++TLP  I  L  L  L +  N++TTLP  I  L+KL+ L L+ N L 
Sbjct: 137 LQWLNLS--YNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLT 194

Query: 189 SPPMDV 194
           + P ++
Sbjct: 195 TLPQEI 200



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 70/113 (61%), Gaps = 2/113 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L N+ +LD+ +NQL  LP  IG L  L+ L +S N L ++PK I   ++L+E
Sbjct: 242 IPKEI-GQLQNLQMLDLGNNQLTILPKEIGKLQNLQWLYLSNNQLTTIPKEIGQLQNLQE 300

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLN 114
           L  + N+L  +P  IG +L NL+ L ++ N+++ +P+ +  L +L+ L  R N
Sbjct: 301 LYLSNNQLTTIPKEIG-QLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNN 352


>gi|383865861|ref|XP_003708391.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Megachile
           rotundata]
          Length = 610

 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 69/182 (37%), Positives = 110/182 (60%), Gaps = 3/182 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L ++V   ++ N+L  LP  IGCL+ L+ L +S N L SLP T+EN +SL  L+   NKL
Sbjct: 151 LTHLVEFYLYGNKLVTLPPEIGCLANLETLALSENSLTSLPNTLENLKSLRVLDLRHNKL 210

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++PD + ++L +L TL +  N++  +  ++ +LT+L +L  R N +K LP  +  L+NL
Sbjct: 211 SEIPDVV-YKLTSLTTLFLRFNRVRYVSDNIRNLTNLTMLSLRENKIKELPAGIGKLVNL 269

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
              ++S N  +LE LP  IG  + L  LD+ +N++  +PD+IG L  L +L L  N L +
Sbjct: 270 ITFDVSHN--HLEHLPEEIGNCVQLSTLDLQHNELLDIPDTIGNLISLTRLGLRYNRLSN 327

Query: 190 PP 191
            P
Sbjct: 328 IP 329



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 110/206 (53%), Gaps = 27/206 (13%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           +N+V L++ +NQL  +P+ I CL  L++L +S NLL+ +P +I N R L  L+   NK+ 
Sbjct: 431 VNMVELNLGTNQLTKIPDDIQCLQSLEILILSNNLLKRIPASIANLRKLRVLDLEENKIE 490

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ IGF L +L+ L +  N++  LP+++ HLT+L  L    N L  LPE++  L NL+
Sbjct: 491 SLPNEIGF-LRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYLPEEIGTLENLD 549

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L ++ N   L  LP+ + L  +L               SI        +S+E  PL   
Sbjct: 550 SLYVNDNAN-LHNLPFELALCTNL---------------SI--------MSIENCPLSQI 585

Query: 191 PMDVVEQGLSAVKGYLSEKMNNDHKS 216
           P ++V  G S V  +L  KM   ++S
Sbjct: 586 PPEIVAGGPSLVIQFL--KMQGPYRS 609



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 104/196 (53%), Gaps = 5/196 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +    + +  LD+  N+L  +P++IG L  L  L +  N L ++PK++ NC+ ++E
Sbjct: 282 LPEEI-GNCVQLSTLDLQHNELLDIPDTIGNLISLTRLGLRYNRLSNIPKSLANCKLMDE 340

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ-SLTHLTSLRVLDARLNCLKSLP 120
            +   N++ QLPD +   L +L T++++ N     P       T++  ++   N +  +P
Sbjct: 341 FSVEGNQVSQLPDGLLASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIP 400

Query: 121 EDL-ENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
             +     NL  LN+ +N   L  LP  IG  +++VEL++  N++T +PD I CL+ L+ 
Sbjct: 401 YGIFSRAKNLTKLNMKEN--QLTALPLDIGTWVNMVELNLGTNQLTKIPDDIQCLQSLEI 458

Query: 180 LSLEGNPLVSPPMDVV 195
           L L  N L   P  + 
Sbjct: 459 LILSNNLLKRIPASIA 474



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 101/195 (51%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNS-IGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +P+ L A L ++  + +  N     P+      + +  +++  N ++ +P  I    ++L
Sbjct: 351 LPDGLLASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNL 410

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP  IG   +N+  L++  N++  +P  +  L SL +L    N LK +
Sbjct: 411 TKLNMKENQLTALPLDIG-TWVNMVELNLGTNQLTKIPDDIQCLQSLEILILSNNLLKRI 469

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  + NL  L VL++ +N   +E+LP  IG L  L +L +  N++T+LP +IG L  L  
Sbjct: 470 PASIANLRKLRVLDLEEN--KIESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTY 527

Query: 180 LSLEGNPLVSPPMDV 194
           LS+  N L   P ++
Sbjct: 528 LSVGENNLNYLPEEI 542



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 34/221 (15%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L ++  L +  N+++ + ++I  L+ L +L +  N ++ LP  I    +L  
Sbjct: 213 IPD-VVYKLTSLTTLFLRFNRVRYVSDNIRNLTNLTMLSLRENKIKELPAGIGKLVNLIT 271

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
            + + N L  LP+ IG   + L TL +  N+++ +P ++ +L SL  L  R N L ++P+
Sbjct: 272 FDVSHNHLEHLPEEIG-NCVQLSTLDLQHNELLDIPDTIGNLISLTRLGLRYNRLSNIPK 330

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVEL------------------------ 157
            L N   ++  ++  N   +  LP   GLL SL +L                        
Sbjct: 331 SLANCKLMDEFSVEGN--QVSQLPD--GLLASLSDLTTITLSRNAFTAYPSGGPAQFTNV 386

Query: 158 ---DVSYNKITTLPDSIGCLRK-LQKLSLEGNPLVSPPMDV 194
              ++ +NKI  +P  I    K L KL+++ N L + P+D+
Sbjct: 387 YSINLEHNKIDKIPYGIFSRAKNLTKLNMKENQLTALPLDI 427



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 68/124 (54%), Gaps = 5/124 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP S+ A L  + VLD+  N+++ LPN IG L  L+ L +  N + SLP+ I +  +L  
Sbjct: 469 IPASI-ANLRKLRVLDLEENKIESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTY 527

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNK-IVILPQSLTHLTSLRVLDARLNC-LKSL 119
           L+   N L  LP+ IG  L NL +L +N N  +  LP  L   T+L ++    NC L  +
Sbjct: 528 LSVGENNLNYLPEEIG-TLENLDSLYVNDNANLHNLPFELALCTNLSIMSIE-NCPLSQI 585

Query: 120 PEDL 123
           P ++
Sbjct: 586 PPEI 589



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 9/156 (5%)

Query: 39  LDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ 98
           LDVS    +   +  E C  +  L+ + + +  LP T+  +L +L    +  NK+V LP 
Sbjct: 117 LDVS----KEFTRCKEEC--VTRLDLSKSSITNLPSTVR-DLTHLVEFYLYGNKLVTLPP 169

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
            +  L +L  L    N L SLP  LENL +L VL++  N   L  +P  +  L SL  L 
Sbjct: 170 EIGCLANLETLALSENSLTSLPNTLENLKSLRVLDLRHN--KLSEIPDVVYKLTSLTTLF 227

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           + +N++  + D+I  L  L  LSL  N +   P  +
Sbjct: 228 LRFNRVRYVSDNIRNLTNLTMLSLRENKIKELPAGI 263


>gi|421116143|ref|ZP_15576532.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410012309|gb|EKO70411.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
          Length = 356

 Score =  107 bits (267), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 112/184 (60%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++ S +L  LP  I  L  LK LD++ N  ++LPK I   ++L+ELN   N+L+
Sbjct: 48  LDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLK 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG +L NL+TL ++ N++   PQ +  L +L+ L+   N L +L +++  L +L+
Sbjct: 108 NLPKEIG-QLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+ +N   L+ LP  IG L +L EL +S N++T LP+ IG L+ LQ L L  N L   
Sbjct: 167 KLNLDKN--RLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTIL 224

Query: 191 PMDV 194
           P ++
Sbjct: 225 PKEI 228



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 125/221 (56%), Gaps = 10/221 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  NQL  L   IG L  L+ L++  N L++LP  I   ++L+EL  + N
Sbjct: 137 GQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNN 196

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+ L +  N++ ILP+ +  L +L++L +  N L  LP+++  L 
Sbjct: 197 QLTILPEEIG-QLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQ 255

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L +S N   L TLP  IG L +L EL ++ N++TTLP  IG L+ LQ      N L
Sbjct: 256 KLQYLYLSHN--QLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQL 313

Query: 188 VSPPMDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
              P ++ + Q L  +      K+NN+  S +++  + KL+
Sbjct: 314 TMLPQEIGQLQNLQWL------KLNNNQLSSQEEERIQKLL 348



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  N+L   P  IG L  L+ L++  N L +L + I   +SL++LN + N
Sbjct: 114 GQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKN 173

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP+ IG +L NL+ L ++ N++ ILP+ +  L +L+ L    N L  LP+++  L 
Sbjct: 174 RLKALPNEIG-QLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQ 232

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L    N   L  LP  IG L  L  L +S+N++TTLP  IG L  LQ+L L  N L
Sbjct: 233 NLKLLYSVNN--ELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQL 290

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 291 TTLPKEI 297



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 106/186 (56%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  LD+ +NQ K LP  IG L  L+ L++  N L++LPK I   ++L+ L  + N+
Sbjct: 69  QLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNLQTLILSVNR 128

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L   P  IG +L NL+ L+++ N++  L Q +  L SL+ L+   N LK+LP ++  L N
Sbjct: 129 LTTFPQEIG-QLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQN 187

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S N   L  LP  IG L +L  L +  N++T LP  IG L+ L+ L    N L 
Sbjct: 188 LQELYLSNN--QLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELT 245

Query: 189 SPPMDV 194
             P ++
Sbjct: 246 ILPQEI 251



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 103/192 (53%), Gaps = 3/192 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L++  N+LK LPN IG L  L+ L +S N L  LP+ I   ++L+ L    N+L  LP  
Sbjct: 168 LNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKE 227

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NLK L    N++ ILPQ +  L  L+ L    N L +LP+++  L NL+ L ++
Sbjct: 228 IG-QLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLN 286

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            N   L TLP  IG L +L       N++T LP  IG L+ LQ L L  N L S   + +
Sbjct: 287 DN--QLTTLPKEIGQLKNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQLSSQEEERI 344

Query: 196 EQGLSAVKGYLS 207
           ++ L   + Y  
Sbjct: 345 QKLLPKCQIYFE 356



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVL+     L +LP++++ L NL+ L+++ N    +TLP  IG L +L 
Sbjct: 40  LTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANN--QFKTLPKEIGQLQNLQ 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           EL++  N++  LP  IG L+ LQ L L  N L + P ++
Sbjct: 98  ELNLWNNQLKNLPKEIGQLQNLQTLILSVNRLTTFPQEI 136


>gi|374990821|ref|YP_004966316.1| small GTP-binding protein domain-containing protein [Streptomyces
           bingchenggensis BCW-1]
 gi|297161473|gb|ADI11185.1| small GTP-binding protein domain-containing protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 370

 Score =  107 bits (267), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 106/193 (54%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L   L  +  LDV SN++  +P+S+G L+ L  LD+SGN L  +P+T+    +L E
Sbjct: 139 LPEFLGG-LKKLASLDVGSNRISAVPSSLGDLAALSELDLSGNRLVEIPRTLGKLTALTE 197

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN +FN+L +LP ++G EL NL  L +  N++  LP  L+ LT+LR L+   N L  LP 
Sbjct: 198 LNLDFNRLAELPASLG-ELANLSHLLLGSNRLTRLPAELSGLTALRWLNLDRNELTELPP 256

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
                  L  +N+   F  L  LP ++G L +L  L +  N++T LP S+  L  L  L 
Sbjct: 257 WAGGFTALTGINLG--FNRLTALPETLGGLTALTSLSLRGNRLTELPASMAGLTALTSLD 314

Query: 182 LEGNPLVSPPMDV 194
           L  N L   P  V
Sbjct: 315 LGDNELTDLPAWV 327



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 116/218 (53%), Gaps = 9/218 (4%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L  +  L +  N+L  LP  +G L KL  LDV  N + ++P ++ +  +L EL+ + N+
Sbjct: 122 QLTELTDLALRDNKLTELPEFLGGLKKLASLDVGSNRISAVPSSLGDLAALSELDLSGNR 181

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L ++P T+G +L  L  L+++ N++  LP SL  L +L  L    N L  LP +L  L  
Sbjct: 182 LVEIPRTLG-KLTALTELNLDFNRLAELPASLGELANLSHLLLGSNRLTRLPAELSGLTA 240

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L  LN+ +N   L  LP   G   +L  +++ +N++T LP+++G L  L  LSL GN L 
Sbjct: 241 LRWLNLDRN--ELTELPPWAGGFTALTGINLGFNRLTALPETLGGLTALTSLSLRGNRLT 298

Query: 189 SPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKL 226
             P  +   GL+A    L+     D++     +WVG L
Sbjct: 299 ELPASMA--GLTA----LTSLDLGDNELTDLPAWVGDL 330



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 115/229 (50%), Gaps = 9/229 (3%)

Query: 5   SLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNA 64
           +L A    +  LD+       +P+ +G L+ L  L +S N LE LP+++ N  +L E   
Sbjct: 49  ALLAEATALTRLDLSDGTFTEVPDFLGDLTGLTHLSLSDNRLEELPESLGNLSALTEFVL 108

Query: 65  NFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLE 124
           N N+L Q+P  +  +L  L  L++  NK+  LP+ L  L  L  LD   N + ++P  L 
Sbjct: 109 NGNRLAQIPIWV-RQLTELTDLALRDNKLTELPEFLGGLKKLASLDVGSNRISAVPSSLG 167

Query: 125 NLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEG 184
           +L  L  L++S N   L  +P ++G L +L EL++ +N++  LP S+G L  L  L L  
Sbjct: 168 DLAALSELDLSGN--RLVEIPRTLGKLTALTELNLDFNRLAELPASLGELANLSHLLLGS 225

Query: 185 NPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFN 233
           N L   P ++   GL+A++ +L+   N   + P    W G        N
Sbjct: 226 NRLTRLPAEL--SGLTALR-WLNLDRNELTELPP---WAGGFTALTGIN 268



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 103/204 (50%), Gaps = 8/204 (3%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ L   L  +  L +  N+L+ LP S+G LS L    ++GN L  +P  +     L +
Sbjct: 70  VPDFL-GDLTGLTHLSLSDNRLEELPESLGNLSALTEFVLNGNRLAQIPIWVRQLTELTD 128

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    NKL +LP+ +G  L  L +L +  N+I  +P SL  L +L  LD   N L  +P 
Sbjct: 129 LALRDNKLTELPEFLG-GLKKLASLDVGSNRISAVPSSLGDLAALSELDLSGNRLVEIPR 187

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L  L  L  LN+  +F  L  LP S+G L +L  L +  N++T LP  +  L  L+ L+
Sbjct: 188 TLGKLTALTELNL--DFNRLAELPASLGELANLSHLLLGSNRLTRLPAELSGLTALRWLN 245

Query: 182 LEGNPLVS-PPMDVVEQGLSAVKG 204
           L+ N L   PP      G +A+ G
Sbjct: 246 LDRNELTELPPW---AGGFTALTG 266



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 89/175 (50%), Gaps = 3/175 (1%)

Query: 22  QLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELI 81
            L  +P  +   + L  LD+S      +P  + +   L  L+ + N+L +LP+++G  L 
Sbjct: 43  SLPVVPALLAEATALTRLDLSDGTFTEVPDFLGDLTGLTHLSLSDNRLEELPESLG-NLS 101

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
            L    +N N++  +P  +  LT L  L  R N L  LPE L  L  L  L++  N   +
Sbjct: 102 ALTEFVLNGNRLAQIPIWVRQLTELTDLALRDNKLTELPEFLGGLKKLASLDVGSN--RI 159

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
             +P S+G L +L ELD+S N++  +P ++G L  L +L+L+ N L   P  + E
Sbjct: 160 SAVPSSLGDLAALSELDLSGNRLVEIPRTLGKLTALTELNLDFNRLAELPASLGE 214


>gi|418755279|ref|ZP_13311486.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964290|gb|EKO32180.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 267

 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 79/202 (39%), Positives = 115/202 (56%), Gaps = 6/202 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +   L N+  L++ +N+L  LP  IG L KL+ L ++ N L +LPK I   + LE 
Sbjct: 41  LPEEI-GTLQNLQSLNLENNRLITLPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEW 99

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+LR LP  IG +L NLK L +  N++   P+ +  L  L+ L    N L +LP+
Sbjct: 100 LGLENNQLRILPQEIG-KLQNLKELILENNRLESFPKEIGTLQKLQHLYLANNQLATLPK 158

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L NL+ L++S N   L TLP  IG L  L  L +  N++ TLP  IG L KL+ L+
Sbjct: 159 EIGQLQNLKDLDLSDN--QLVTLPEEIGTLQRLEWLSLKNNQLATLPKEIGKLEKLEDLN 216

Query: 182 LEGNPLVSPPMDVVEQGLSAVK 203
           L GNP  + P ++V  GL  +K
Sbjct: 217 LSGNPFTTFPQEIV--GLKHLK 236



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  +  L + +N+L  LP  IG L  L+ L++  N L +LPK I   + LE L    N
Sbjct: 23  GKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLITLPKEIGTLQKLEWLYLTNN 82

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L  L+ L +  N++ ILPQ +  L +L+ L    N L+S P+++  L 
Sbjct: 83  QLATLPKEIG-KLQRLEWLGLENNQLRILPQEIGKLQNLKELILENNRLESFPKEIGTLQ 141

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L ++ N   L TLP  IG L +L +LD+S N++ TLP+ IG L++L+ LSL+ N L
Sbjct: 142 KLQHLYLANN--QLATLPKEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQL 199

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 200 ATLPKEI 206



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/159 (37%), Positives = 87/159 (54%), Gaps = 3/159 (1%)

Query: 36  LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           LK L ++ N L +LP  I   R LE L    N+L  LP+ IG  L NL++L++  N+++ 
Sbjct: 5   LKWLHLANNQLTTLPNEIGKLRKLEYLRLENNRLTTLPEEIGT-LQNLQSLNLENNRLIT 63

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           LP+ +  L  L  L    N L +LP+++  L  LE L +  N   L  LP  IG L +L 
Sbjct: 64  LPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENN--QLRILPQEIGKLQNLK 121

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           EL +  N++ + P  IG L+KLQ L L  N L + P ++
Sbjct: 122 ELILENNRLESFPKEIGTLQKLQHLYLANNQLATLPKEI 160


>gi|421114928|ref|ZP_15575342.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410013649|gb|EKO71726.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
          Length = 234

 Score =  107 bits (266), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 106/178 (59%), Gaps = 3/178 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V  LD+ +NQL  LP  IG L  L+ L +S N L++LPK IE  + L  L  + N+L  
Sbjct: 38  DVQTLDLSNNQLITLPKEIGQLKGLEWLSLSKNQLKTLPKEIEQLQKLRYLYLSDNQLTT 97

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG+ L  L+ L ++ N++  LP+ +  L  L+VLD   N L +LP ++E L  L+ 
Sbjct: 98  LPKEIGY-LKELQELDLSRNQLTTLPKEIGQLKELQVLDLSNNQLTTLPNEIEFLKRLQE 156

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           L +  N   L TLP  IG L  L +LD+S N++TTLP  I  L+KL++L L+  P++ 
Sbjct: 157 LYLRNN--QLTTLPKGIGYLKKLQKLDLSRNQLTTLPKEIETLKKLEELFLDDIPVLK 212



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 2/113 (1%)

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           +++TL ++ N+++ LP+ +  L  L  L    N LK+LP+++E L  L  L +S N   L
Sbjct: 38  DVQTLDLSNNQLITLPKEIGQLKGLEWLSLSKNQLKTLPKEIEQLQKLRYLYLSDN--QL 95

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            TLP  IG L  L ELD+S N++TTLP  IG L++LQ L L  N L + P ++
Sbjct: 96  TTLPKEIGYLKELQELDLSRNQLTTLPKEIGQLKELQVLDLSNNQLTTLPNEI 148


>gi|386392500|ref|ZP_10077281.1| small GTP-binding protein domain [Desulfovibrio sp. U5L]
 gi|385733378|gb|EIG53576.1| small GTP-binding protein domain [Desulfovibrio sp. U5L]
          Length = 1279

 Score =  107 bits (266), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 75/195 (38%), Positives = 117/195 (60%), Gaps = 4/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+S+  +L N+  LDV S  L  LP+SIG LS L+ LDVSG  L++LP +I    SL+ 
Sbjct: 212 LPDSI-GQLTNLKHLDVSSTSLNTLPDSIGQLSSLQHLDVSGTSLQTLPDSIGQLSSLQH 270

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ +  +L+ LPD+I  +L +L+ L ++   I  LP S+  L++L+ LD     L +LP+
Sbjct: 271 LDVSGTRLQILPDSI-VQLSSLQHLDVSDTSINNLPDSIGQLSNLQHLDVSDTSLNTLPD 329

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L NL+ L +S     L TLP +I  L SL +L++S   +TTLP+++  L  LQ L+
Sbjct: 330 SIGQLSNLQHLEVSD--ASLNTLPETIWRLSSLQDLNLSGTGLTTLPEALCQLSSLQDLN 387

Query: 182 LEGNPLVSPPMDVVE 196
           L G  L + P  + +
Sbjct: 388 LSGTGLTTLPEAICQ 402



 Score =  103 bits (258), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 76/190 (40%), Positives = 109/190 (57%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P S+  +L  +  LDV S  L  LP+SIG LS LK LDVSG  L +LP +I    +L+ 
Sbjct: 166 LPASI-GQLTRLQHLDVSSTGLTSLPDSIGQLSMLKHLDVSGTDLATLPDSIGQLTNLKH 224

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ +   L  LPD+IG +L +L+ L ++   +  LP S+  L+SL+ LD     L+ LP+
Sbjct: 225 LDVSSTSLNTLPDSIG-QLSSLQHLDVSGTSLQTLPDSIGQLSSLQHLDVSGTRLQILPD 283

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L+ L++S     +  LP SIG L +L  LDVS   + TLPDSIG L  LQ L 
Sbjct: 284 SIVQLSSLQHLDVSDT--SINNLPDSIGQLSNLQHLDVSDTSLNTLPDSIGQLSNLQHLE 341

Query: 182 LEGNPLVSPP 191
           +    L + P
Sbjct: 342 VSDASLNTLP 351



 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 102/176 (57%), Gaps = 3/176 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+ + +L  LP  +  L+ LK L ++ N +  LPK +E    LE LN +   L++LP+ 
Sbjct: 41  LDLSALELSFLPLDLPPLTNLKSLTIASNPITILPKWLECLTGLETLNISGTSLKKLPEF 100

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG EL+ L++L ++   +  LP S+  L++LR LD   +   +LP+ +  + NL+ LN+S
Sbjct: 101 IG-ELVGLQSLYVSRTALTTLPNSIRQLSNLRRLDISFSGFINLPDSIGEMPNLQDLNVS 159

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
                L TLP SIG L  L  LDVS   +T+LPDSIG L  L+ L + G  L + P
Sbjct: 160 ST--DLTTLPASIGQLTRLQHLDVSSTGLTSLPDSIGQLSMLKHLDVSGTDLATLP 213



 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 75/195 (38%), Positives = 106/195 (54%), Gaps = 4/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE     L+ +  L V    L  LPNSI  LS L+ LD+S +   +LP +I    +L++
Sbjct: 97  LPE-FIGELVGLQSLYVSRTALTTLPNSIRQLSNLRRLDISFSGFINLPDSIGEMPNLQD 155

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN +   L  LP +IG +L  L+ L ++   +  LP S+  L+ L+ LD     L +LP+
Sbjct: 156 LNVSSTDLTTLPASIG-QLTRLQHLDVSSTGLTSLPDSIGQLSMLKHLDVSGTDLATLPD 214

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L NL+ L++S     L TLP SIG L SL  LDVS   + TLPDSIG L  LQ L 
Sbjct: 215 SIGQLTNLKHLDVSST--SLNTLPDSIGQLSSLQHLDVSGTSLQTLPDSIGQLSSLQHLD 272

Query: 182 LEGNPLVSPPMDVVE 196
           + G  L   P  +V+
Sbjct: 273 VSGTRLQILPDSIVQ 287



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 116/193 (60%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE++  +L ++  L++    L  LP +I  L+ L+ L++SG  L +LP+TI    +L  
Sbjct: 442 LPEAI-CQLNSLQDLNLSGTGLTTLPGAICQLNSLQDLNLSGTGLTTLPETIGQLTNLNN 500

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L A+   L  LPDT+G +L NL+ L+I+   +V LP S+  L+ L++L      L +LPE
Sbjct: 501 LMASNTALTTLPDTLG-QLSNLEFLNISNTSLVTLPDSIGLLSHLQILFVSDTDLVTLPE 559

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +LE+LN+S     L +LP SIG L +L  L+VS   +T+LP+SIG L+ L KL+
Sbjct: 560 SIGQLTSLEILNVSNT--GLTSLPESIGRLTNLQILNVSNTDLTSLPESIGQLKSLIKLN 617

Query: 182 LEGNPLVSPPMDV 194
           +    L S PM +
Sbjct: 618 VSNTGLTSLPMSI 630



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/205 (35%), Positives = 104/205 (50%), Gaps = 26/205 (12%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSG-----------------------NLL 46
           L N+  L + SN +  LP  + CL+ L+ L++SG                         L
Sbjct: 58  LTNLKSLTIASNPITILPKWLECLTGLETLNISGTSLKKLPEFIGELVGLQSLYVSRTAL 117

Query: 47  ESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSL 106
            +LP +I    +L  L+ +F+    LPD+IG E+ NL+ L+++   +  LP S+  LT L
Sbjct: 118 TTLPNSIRQLSNLRRLDISFSGFINLPDSIG-EMPNLQDLNVSSTDLTTLPASIGQLTRL 176

Query: 107 RVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITT 166
           + LD     L SLP+ +  L  L+ L++S     L TLP SIG L +L  LDVS   + T
Sbjct: 177 QHLDVSSTGLTSLPDSIGQLSMLKHLDVSGT--DLATLPDSIGQLTNLKHLDVSSTSLNT 234

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPP 191
           LPDSIG L  LQ L + G  L + P
Sbjct: 235 LPDSIGQLSSLQHLDVSGTSLQTLP 259



 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 71/181 (39%), Positives = 106/181 (58%), Gaps = 4/181 (2%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L++    L  LP +IG L+ L  L  S   L +LP T+    +LE LN +   L  LPD+
Sbjct: 478 LNLSGTGLTTLPETIGQLTNLNNLMASNTALTTLPDTLGQLSNLEFLNISNTSLVTLPDS 537

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L +L+ L ++   +V LP+S+  LTSL +L+     L SLPE +  L NL++LN+S
Sbjct: 538 IGL-LSHLQILFVSDTDLVTLPESIGQLTSLEILNVSNTGLTSLPESIGRLTNLQILNVS 596

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
                L +LP SIG L SL++L+VS   +T+LP SI  L  L++L++    L  PP +++
Sbjct: 597 NT--DLTSLPESIGQLKSLIKLNVSNTGLTSLPMSIRQLLLLRQLTVTATKLPIPP-EII 653

Query: 196 E 196
           E
Sbjct: 654 E 654



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 108/190 (56%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+S+  +L N+  L+V    L  LP +I  LS L+ L++SG  L +LP+ +    SL++
Sbjct: 327 LPDSI-GQLSNLQHLEVSDASLNTLPETIWRLSSLQDLNLSGTGLTTLPEALCQLSSLQD 385

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN +   L  LP+ I  +L +L+ L+++   +  LP+++  L SL+ L+     L +LPE
Sbjct: 386 LNLSGTGLTTLPEAI-CQLNSLQDLNLSGTGLTTLPEAICQLNSLQDLNLSGTGLTTLPE 444

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L+ LN+S     L TLP +I  L SL +L++S   +TTLP++IG L  L  L 
Sbjct: 445 AICQLNSLQDLNLSGT--GLTTLPGAICQLNSLQDLNLSGTGLTTLPETIGQLTNLNNLM 502

Query: 182 LEGNPLVSPP 191
                L + P
Sbjct: 503 ASNTALTTLP 512



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 65/115 (56%), Gaps = 2/115 (1%)

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NLK+L+I  N I ILP+ L  LT L  L+     LK LPE +  L+ L+ L +S+   
Sbjct: 58  LTNLKSLTIASNPITILPKWLECLTGLETLNISGTSLKKLPEFIGELVGLQSLYVSRT-- 115

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L TLP SI  L +L  LD+S++    LPDSIG +  LQ L++    L + P  +
Sbjct: 116 ALTTLPNSIRQLSNLRRLDISFSGFINLPDSIGEMPNLQDLNVSSTDLTTLPASI 170



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 60/111 (54%), Gaps = 2/111 (1%)

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L ++  ++  LP  L  LT+L+ L    N +  LP+ LE L  LE LNIS     L+ LP
Sbjct: 41  LDLSALELSFLPLDLPPLTNLKSLTIASNPITILPKWLECLTGLETLNISGT--SLKKLP 98

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
             IG L+ L  L VS   +TTLP+SI  L  L++L +  +  ++ P  + E
Sbjct: 99  EFIGELVGLQSLYVSRTALTTLPNSIRQLSNLRRLDISFSGFINLPDSIGE 149



 Score = 37.7 bits (86), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 1/75 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+  RL N+ +L+V +  L  LP SIG L  L  L+VS   L SLP +I     L +
Sbjct: 580 LPESI-GRLTNLQILNVSNTDLTSLPESIGQLKSLIKLNVSNTGLTSLPMSIRQLLLLRQ 638

Query: 62  LNANFNKLRQLPDTI 76
           L     KL   P+ I
Sbjct: 639 LTVTATKLPIPPEII 653


>gi|410451731|ref|ZP_11305733.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014497|gb|EKO76627.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 394

 Score =  107 bits (266), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 74/195 (37%), Positives = 113/195 (57%), Gaps = 3/195 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  NQL  LP  IG L  L+ L ++GN   +LPK I N ++L+ L    N
Sbjct: 195 GQLQNLQKLILDKNQLTTLPQEIGKLQNLRGLALTGNQFTTLPKEIGNLQNLQGLALTRN 254

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG  L  L+ L ++ N++  LP+ + +L +L+ L+ R N L ++P+++ NL 
Sbjct: 255 QLTTLPKEIG-NLQKLQELRLDHNQLTTLPKEIGNLQNLKDLNLRSNQLTTIPQEIGNLQ 313

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NLE LN+S N   L  LP  I  L SL  LD+S N +T+ P+ IG L+ L++L LE  P 
Sbjct: 314 NLEYLNLSSN--QLTALPKEIENLQSLESLDLSGNPLTSFPEEIGKLQHLKRLRLENIPT 371

Query: 188 VSPPMDVVEQGLSAV 202
           + P  + + + L  V
Sbjct: 372 LLPQKEKIRKLLPNV 386



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 117/204 (57%), Gaps = 7/204 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L++  NQL  +P  IG L  L+ LD+  N +  LP  I   +SL+ELN +FN
Sbjct: 57  GNLQNLQELNLWENQLTTIPQEIGNLQHLQKLDLGFNKITVLPNEIGKLQSLQELNLSFN 116

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  I +EL +L+TL +  N++  LP+ +  L +L+ L    N L ++P+++ NL 
Sbjct: 117 QLTTIPKEI-WELQHLQTLHLVYNQLTTLPKEIGKLQNLQELHLWENQLTTIPQEIGNLQ 175

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +  N   L TLP  +G L +L +L +  N++TTLP  IG L+ L+ L+L GN  
Sbjct: 176 NLKELYLMHN--NLTTLPKEVGQLQNLQKLILDKNQLTTLPQEIGKLQNLRGLALTGNQF 233

Query: 188 VSPPMDVVE----QGLSAVKGYLS 207
            + P ++      QGL+  +  L+
Sbjct: 234 TTLPKEIGNLQNLQGLALTRNQLT 257



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/182 (36%), Positives = 113/182 (62%), Gaps = 3/182 (1%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           V VL +++ +L  LP  IG L  L+ L++  N L ++P+ I N + L++L+  FNK+  L
Sbjct: 39  VRVLYLNAKKLIALPKEIGNLQNLQELNLWENQLTTIPQEIGNLQHLQKLDLGFNKITVL 98

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P+ IG +L +L+ L+++ N++  +P+ +  L  L+ L    N L +LP+++  L NL+ L
Sbjct: 99  PNEIG-KLQSLQELNLSFNQLTTIPKEIWELQHLQTLHLVYNQLTTLPKEIGKLQNLQEL 157

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
           ++ +N   L T+P  IG L +L EL + +N +TTLP  +G L+ LQKL L+ N L + P 
Sbjct: 158 HLWEN--QLTTIPQEIGNLQNLKELYLMHNNLTTLPKEVGQLQNLQKLILDKNQLTTLPQ 215

Query: 193 DV 194
           ++
Sbjct: 216 EI 217



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  NQL  +P  IG L  LK L +  N L +LPK +   ++L++L  + N
Sbjct: 149 GKLQNLQELHLWENQLTTIPQEIGNLQNLKELYLMHNNLTTLPKEVGQLQNLQKLILDKN 208

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L++  N+   LP+ + +L +L+ L    N L +LP+++ NL 
Sbjct: 209 QLTTLPQEIG-KLQNLRGLALTGNQFTTLPKEIGNLQNLQGLALTRNQLTTLPKEIGNLQ 267

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L +  N   L TLP  IG L +L +L++  N++TT+P  IG L+ L+ L+L  N L
Sbjct: 268 KLQELRLDHN--QLTTLPKEIGNLQNLKDLNLRSNQLTTIPQEIGNLQNLEYLNLSSNQL 325

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 326 TALPKEI 332



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 106/187 (56%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++  L++  NQL  +P  I  L  L+ L +  N L +LPK I   ++L+EL+   N
Sbjct: 103 GKLQSLQELNLSFNQLTTIPKEIWELQHLQTLHLVYNQLTTLPKEIGKLQNLQELHLWEN 162

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  IG  L NLK L +  N +  LP+ +  L +L+ L    N L +LP+++  L 
Sbjct: 163 QLTTIPQEIG-NLQNLKELYLMHNNLTTLPKEVGQLQNLQKLILDKNQLTTLPQEIGKLQ 221

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L ++ N     TLP  IG L +L  L ++ N++TTLP  IG L+KLQ+L L+ N L
Sbjct: 222 NLRGLALTGN--QFTTLPKEIGNLQNLQGLALTRNQLTTLPKEIGNLQKLQELRLDHNQL 279

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 280 TTLPKEI 286



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 98/161 (60%), Gaps = 3/161 (1%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           ++++VL ++   L +LPK I N ++L+ELN   N+L  +P  IG  L +L+ L +  NKI
Sbjct: 37  TQVRVLYLNAKKLIALPKEIGNLQNLQELNLWENQLTTIPQEIG-NLQHLQKLDLGFNKI 95

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
            +LP  +  L SL+ L+   N L ++P+++  L +L+ L++   +  L TLP  IG L +
Sbjct: 96  TVLPNEIGKLQSLQELNLSFNQLTTIPKEIWELQHLQTLHLV--YNQLTTLPKEIGKLQN 153

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L EL +  N++TT+P  IG L+ L++L L  N L + P +V
Sbjct: 154 LQELHLWENQLTTIPQEIGNLQNLKELYLMHNNLTTLPKEV 194



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/101 (41%), Positives = 64/101 (63%), Gaps = 2/101 (1%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L + T +RVL      L +LP+++ NL NL+ LN+ +N   L T+P  IG L  L 
Sbjct: 29  LNEALQNPTQVRVLYLNAKKLIALPKEIGNLQNLQELNLWEN--QLTTIPQEIGNLQHLQ 86

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           +LD+ +NKIT LP+ IG L+ LQ+L+L  N L + P ++ E
Sbjct: 87  KLDLGFNKITVLPNEIGKLQSLQELNLSFNQLTTIPKEIWE 127


>gi|417770632|ref|ZP_12418538.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418680646|ref|ZP_13241890.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|400327590|gb|EJO79835.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409947404|gb|EKN97402.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|455665927|gb|EMF31409.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 333

 Score =  107 bits (266), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 112/184 (60%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++ S +L  LP  I  L  LK LD++ N  ++LPK I   ++L+ELN   N+L+
Sbjct: 48  LDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLK 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG +L NL+TL ++ N++   PQ +  L +L+ L+   N L +L +++  L +L+
Sbjct: 108 NLPKEIG-QLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+ +N   L+ LP  IG L +L EL +S N++T LP+ IG L+ LQ L L  N L   
Sbjct: 167 KLNLDKN--RLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTIL 224

Query: 191 PMDV 194
           P ++
Sbjct: 225 PKEI 228



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 126/229 (55%), Gaps = 8/229 (3%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  LD+ +NQ K LP  IG L  L+ L++  N L++LPK I   ++L+ L  + N+
Sbjct: 69  QLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNLQTLILSVNR 128

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L   P  IG +L NL+ L+++ N++  L Q +  L SL+ L+   N LK+LP ++  L N
Sbjct: 129 LTTFPQEIG-QLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQN 187

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S N   L  LP  IG L +L  L +  N++T LP  IG L+ L+ L    N L 
Sbjct: 188 LQELYLSNN--QLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELT 245

Query: 189 SPPMDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGAL 236
           + P ++ + + L  +  YL++  N     PK+   +  L  + +FN  L
Sbjct: 246 TLPKEIGQLENLQEL--YLND--NQLTTLPKEIGQLKNLQTFISFNNQL 290



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 76/221 (34%), Positives = 124/221 (56%), Gaps = 10/221 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  N+L   P  IG L  L+ L++  N L +L + I   +SL++LN + N
Sbjct: 114 GQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKN 173

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP+ IG +L NL+ L ++ N++ ILP+ +  L +L+ L    N L  LP+++  L 
Sbjct: 174 RLKALPNEIG-QLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQ 232

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L    N   L TLP  IG L +L EL ++ N++TTLP  IG L+ LQ      N L
Sbjct: 233 NLKLLYSVNN--ELTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQL 290

Query: 188 VSPPMDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
              P ++ + Q L  +      K+NN+  S +++  + KL+
Sbjct: 291 TMLPQEIGQLQNLQWL------KLNNNQLSSQEEERIQKLL 325



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 112/200 (56%), Gaps = 3/200 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  NQL  L   IG L  L+ L++  N L++LP  I   ++L+EL  + N
Sbjct: 137 GQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNN 196

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+ L +  N++ ILP+ +  L +L++L +  N L +LP+++  L 
Sbjct: 197 QLTILPEEIG-QLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTTLPKEIGQLE 255

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L ++ N   L TLP  IG L +L       N++T LP  IG L+ LQ L L  N L
Sbjct: 256 NLQELYLNDN--QLTTLPKEIGQLKNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQL 313

Query: 188 VSPPMDVVEQGLSAVKGYLS 207
            S   + +++ L   + Y  
Sbjct: 314 SSQEEERIQKLLPKCQIYFE 333



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVL+     L +LP++++ L NL+ L+++ N    +TLP  IG L +L 
Sbjct: 40  LTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANN--QFKTLPKEIGQLQNLQ 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           EL++  N++  LP  IG L+ LQ L L  N L + P ++
Sbjct: 98  ELNLWNNQLKNLPKEIGQLQNLQTLILSVNRLTTFPQEI 136


>gi|421088219|ref|ZP_15549047.1| leucine rich repeat protein, partial [Leptospira kirschneri str.
           200802841]
 gi|410003204|gb|EKO53650.1| leucine rich repeat protein, partial [Leptospira kirschneri str.
           200802841]
          Length = 305

 Score =  107 bits (266), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 120/193 (62%), Gaps = 3/193 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L N+ +L++ +NQL  LP  IG L  L+ L +S N L++LPK I   ++L E
Sbjct: 80  VPKEI-GQLKNLQMLNLEANQLTTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLYE 138

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   NKL  LP+ IG +L NL+ L +  N+  ILP+ +  L +L+ L    N    LP+
Sbjct: 139 LNLYENKLTTLPNEIG-QLKNLRVLELTHNQFTILPEGIGKLKNLQELHLHDNQFTILPK 197

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L NL++L++   +  L+T+P  IG L +L +L++  N++TTLP  IG L+ L+KLS
Sbjct: 198 EIGKLKNLKMLSLGY-YNQLKTIPVEIGQLQNLQQLNLDANQLTTLPKEIGQLKNLKKLS 256

Query: 182 LEGNPLVSPPMDV 194
           L+ N L + P ++
Sbjct: 257 LDANQLTTLPNEI 269



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 105/184 (57%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++   +L  LP  IG L  L  L++  N   +LP  I   +SL+EL    N L 
Sbjct: 19  LDVRVLNLGKQKLTILPKEIGQLKNLLTLNLWNNQFTTLPNEIGQLQSLQELYLGKNLLT 78

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            +P  IG +L NL+ L++  N++  LP+ +  L +L+ L    N LK+LP+++  L NL 
Sbjct: 79  TVPKEIG-QLKNLQMLNLEANQLTTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLY 137

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+ +N   L TLP  IG L +L  L++++N+ T LP+ IG L+ LQ+L L  N     
Sbjct: 138 ELNLYEN--KLTTLPNEIGQLKNLRVLELTHNQFTILPEGIGKLKNLQELHLHDNQFTIL 195

Query: 191 PMDV 194
           P ++
Sbjct: 196 PKEI 199



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/174 (37%), Positives = 97/174 (55%), Gaps = 4/174 (2%)

Query: 22  QLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELI 81
           Q   LPN IG L  L+ L +  NLL ++PK I   ++L+ LN   N+L  LP  IG  L 
Sbjct: 53  QFTTLPNEIGQLQSLQELYLGKNLLTTVPKEIGQLKNLQMLNLEANQLTTLPKEIG-RLQ 111

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N++  LP+ +  L +L  L+   N L +LP ++  L NL VL ++ N    
Sbjct: 112 NLQELYLSYNQLKTLPKEIGQLQNLYELNLYENKLTTLPNEIGQLKNLRVLELTHN--QF 169

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLE-GNPLVSPPMDV 194
             LP  IG L +L EL +  N+ T LP  IG L+ L+ LSL   N L + P+++
Sbjct: 170 TILPEGIGKLKNLQELHLHDNQFTILPKEIGKLKNLKMLSLGYYNQLKTIPVEI 223



 Score = 40.8 bits (94), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 55/87 (63%), Gaps = 2/87 (2%)

Query: 8   ARLLNVVVLDV-HSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANF 66
            +L N+ +L + + NQLK +P  IG L  L+ L++  N L +LPK I   ++L++L+ + 
Sbjct: 200 GKLKNLKMLSLGYYNQLKTIPVEIGQLQNLQQLNLDANQLTTLPKEIGQLKNLKKLSLDA 259

Query: 67  NKLRQLPDTIGFELINLKTLSINCNKI 93
           N+L  LP+ IG +L NL+ L +  N++
Sbjct: 260 NQLTTLPNEIG-QLQNLQELYLIDNQL 285


>gi|418703173|ref|ZP_13264063.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|418714227|ref|ZP_13274787.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|421127504|ref|ZP_15587728.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421134109|ref|ZP_15594251.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410021847|gb|EKO88630.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410435594|gb|EKP84726.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410767237|gb|EKR37914.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410789170|gb|EKR82872.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|456968636|gb|EMG09806.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 283

 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 113/204 (55%), Gaps = 22/204 (10%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V  LD+ +NQL  LP  IG L +L+ L +S N L++LPK IE  + L  L  N N+L  
Sbjct: 41  DVQTLDLSNNQLITLPKEIGQLKELEWLSLSKNQLKTLPKEIEQLQKLRYLYLNDNQLTT 100

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG+ L  L+ L ++ N++  LP+ + +L  L  L+   N L +LP+++  L  L+V
Sbjct: 101 LPKEIGY-LKELQELDLSRNQLTTLPKEIEYLKDLESLNLINNQLTTLPKEIGQLKELQV 159

Query: 132 LNISQN--------FQYLE-------------TLPYSIGLLMSLVELDVSYNKITTLPDS 170
           L++S N         ++L+             TLP  IG L  L  LD+S+N++T L   
Sbjct: 160 LDLSNNQLTTLPNEIEFLKRLQELYLRNNQLTTLPKGIGYLKELWLLDLSFNQLTALSKG 219

Query: 171 IGCLRKLQKLSLEGNPLVSPPMDV 194
           IG L+KLQKL L  N L + P ++
Sbjct: 220 IGYLKKLQKLDLSRNQLTTLPKEI 243



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 102/174 (58%), Gaps = 3/174 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L ++ NQL  LP  IG L +L+ LD+S N L +LPK IE  + LE LN   N+L  LP  
Sbjct: 91  LYLNDNQLTTLPKEIGYLKELQELDLSRNQLTTLPKEIEYLKDLESLNLINNQLTTLPKE 150

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L  L+ L ++ N++  LP  +  L  L+ L  R N L +LP+ +  L  L +L++S
Sbjct: 151 IG-QLKELQVLDLSNNQLTTLPNEIEFLKRLQELYLRNNQLTTLPKGIGYLKELWLLDLS 209

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
             F  L  L   IG L  L +LD+S N++TTLP  I  L+KL++L L+  P++ 
Sbjct: 210 --FNQLTALSKGIGYLKKLQKLDLSRNQLTTLPKEIETLKKLEELFLDDIPVLK 261



 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 31/48 (64%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEEL 62
           +LD+  NQL  L   IG L KL+ LD+S N L +LPK IE  + LEEL
Sbjct: 205 LLDLSFNQLTALSKGIGYLKKLQKLDLSRNQLTTLPKEIETLKKLEEL 252


>gi|429961438|gb|ELA40983.1| hypothetical protein VICG_02013 [Vittaforma corneae ATCC 50505]
          Length = 875

 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 79/179 (44%), Positives = 107/179 (59%), Gaps = 4/179 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L +H N LK LP  I  L +L++L +SGN LE+LP  IE  + L  L  + N
Sbjct: 248 GELENLQKLYLHRNNLKTLPVEIEKLKELRILQLSGNKLETLPVEIEKLKELRILQLSGN 307

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  LP  IG EL NL+ L +N NK+  LP ++  L +LR L  R N LK LP ++  L 
Sbjct: 308 KLETLPVAIG-ELENLQKLYLNDNKLETLPAAIGELDNLRELCLRNNKLKILPSEIGELG 366

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLR-KLQKLSLEGN 185
           +L+ L++  N   LETLP +IG L +L EL++S NK+ TLP  I  L   +Q L+L GN
Sbjct: 367 DLQYLDLKNN--KLETLPAAIGELKNLRELNLSGNKLETLPIEIEKLSGSMQLLNLRGN 423



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/194 (40%), Positives = 114/194 (58%), Gaps = 3/194 (1%)

Query: 5   SLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNA 64
           ++ A L  +  L++  N+LK LP+ IG L  L+ L++S N LESLP  I   ++L+ L  
Sbjct: 176 TVIAELRKLQTLELLGNKLKLLPDEIGELKNLQYLNLSLNKLESLPPEIGELKNLQHLFL 235

Query: 65  NFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLE 124
             NKL  LP  IG EL NL+ L ++ N +  LP  +  L  LR+L    N L++LP ++E
Sbjct: 236 GDNKLEILPIAIG-ELENLQKLYLHRNNLKTLPVEIEKLKELRILQLSGNKLETLPVEIE 294

Query: 125 NLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEG 184
            L  L +L +S N   LETLP +IG L +L +L ++ NK+ TLP +IG L  L++L L  
Sbjct: 295 KLKELRILQLSGN--KLETLPVAIGELENLQKLYLNDNKLETLPAAIGELDNLRELCLRN 352

Query: 185 NPLVSPPMDVVEQG 198
           N L   P ++ E G
Sbjct: 353 NKLKILPSEIGELG 366



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/192 (40%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 5   SLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNA 64
           ++  +L N+  L + +N+L+  P  I  L KL+ L++ GN L+ LP  I   ++L+ LN 
Sbjct: 153 TVIRKLKNLERLILDNNKLESFPTVIAELRKLQTLELLGNKLKLLPDEIGELKNLQYLNL 212

Query: 65  NFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLE 124
           + NKL  LP  IG EL NL+ L +  NK+ ILP ++  L +L+ L    N LK+LP ++E
Sbjct: 213 SLNKLESLPPEIG-ELKNLQHLFLGDNKLEILPIAIGELENLQKLYLHRNNLKTLPVEIE 271

Query: 125 NLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEG 184
            L  L +L +S N   LETLP  I  L  L  L +S NK+ TLP +IG L  LQKL L  
Sbjct: 272 KLKELRILQLSGN--KLETLPVEIEKLKELRILQLSGNKLETLPVAIGELENLQKLYLND 329

Query: 185 NPLVSPPMDVVE 196
           N L + P  + E
Sbjct: 330 NKLETLPAAIGE 341



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 107/190 (56%), Gaps = 3/190 (1%)

Query: 5   SLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNA 64
            +   L N+  L +  N+L+ LP +IG L  L+ LD+  N  ES P  I   ++LE L  
Sbjct: 107 DVIGELENLSTLHLDDNELETLPAAIGELENLRDLDLGDNQFESFPTVIRKLKNLERLIL 166

Query: 65  NFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLE 124
           + NKL   P  I  EL  L+TL +  NK+ +LP  +  L +L+ L+  LN L+SLP ++ 
Sbjct: 167 DNNKLESFPTVIA-ELRKLQTLELLGNKLKLLPDEIGELKNLQYLNLSLNKLESLPPEIG 225

Query: 125 NLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEG 184
            L NL+ L +  N   LE LP +IG L +L +L +  N + TLP  I  L++L+ L L G
Sbjct: 226 ELKNLQHLFLGDN--KLEILPIAIGELENLQKLYLHRNNLKTLPVEIEKLKELRILQLSG 283

Query: 185 NPLVSPPMDV 194
           N L + P+++
Sbjct: 284 NKLETLPVEI 293



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 104/190 (54%), Gaps = 3/190 (1%)

Query: 5   SLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNA 64
           S    L N+  L + +N+LK L + IG L  L  L +  N LE+LP  I    +L +L+ 
Sbjct: 84  SEIGELKNLQHLVLSNNKLKTLSDVIGELENLSTLHLDDNELETLPAAIGELENLRDLDL 143

Query: 65  NFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLE 124
             N+    P T+  +L NL+ L ++ NK+   P  +  L  L+ L+   N LK LP+++ 
Sbjct: 144 GDNQFESFP-TVIRKLKNLERLILDNNKLESFPTVIAELRKLQTLELLGNKLKLLPDEIG 202

Query: 125 NLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEG 184
            L NL+ LN+S N   LE+LP  IG L +L  L +  NK+  LP +IG L  LQKL L  
Sbjct: 203 ELKNLQYLNLSLN--KLESLPPEIGELKNLQHLFLGDNKLEILPIAIGELENLQKLYLHR 260

Query: 185 NPLVSPPMDV 194
           N L + P+++
Sbjct: 261 NNLKTLPVEI 270



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 103/185 (55%), Gaps = 3/185 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N  V+ +    +  + ++I  L KL+ L++S N L++LP  I   ++L+ L  + NKL+ 
Sbjct: 45  NETVISICRQGITSIDSNIKRLVKLEKLELSHNNLKALPSEIGELKNLQHLVLSNNKLKT 104

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           L D IG EL NL TL ++ N++  LP ++  L +LR LD   N  +S P  +  L NLE 
Sbjct: 105 LSDVIG-ELENLSTLHLDDNELETLPAAIGELENLRDLDLGDNQFESFPTVIRKLKNLER 163

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N   LE+ P  I  L  L  L++  NK+  LPD IG L+ LQ L+L  N L S P
Sbjct: 164 LILDNN--KLESFPTVIAELRKLQTLELLGNKLKLLPDEIGELKNLQYLNLSLNKLESLP 221

Query: 192 MDVVE 196
            ++ E
Sbjct: 222 PEIGE 226



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 64/163 (39%), Positives = 94/163 (57%), Gaps = 4/163 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L  + +L +  N+L+ LP  I  L +L++L +SGN LE+LP  I    +L++L  N NK
Sbjct: 272 KLKELRILQLSGNKLETLPVEIEKLKELRILQLSGNKLETLPVAIGELENLQKLYLNDNK 331

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG EL NL+ L +  NK+ ILP  +  L  L+ LD + N L++LP  +  L N
Sbjct: 332 LETLPAAIG-ELDNLRELCLRNNKLKILPSEIGELGDLQYLDLKNNKLETLPAAIGELKN 390

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVE-LDVSYNKITTLPDS 170
           L  LN+S N   LETLP  I  L   ++ L++  N I+ + D 
Sbjct: 391 LRELNLSGN--KLETLPIEIEKLSGSMQLLNLRGNNISEVGDG 431


>gi|418688126|ref|ZP_13249283.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410737550|gb|EKQ82291.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 266

 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 112/179 (62%), Gaps = 3/179 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++   +L  LP  IG L  L+ L +S N L  LPK I   ++LE L+ + N+L 
Sbjct: 48  LDVRVLNLSGQKLTSLPKEIGQLKNLQSLYLSDNQLTILPKEIVELQNLEHLDLSENQLV 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ IG  L NL++L +  NK+  LP+ +  L +L++L +  N L  LP+++  L NLE
Sbjct: 108 ILPNEIG-RLKNLQSLDLYKNKLTTLPKEIGQLENLQMLWSPENRLAILPKEIGQLENLE 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
            LN+S+N   L T+P  IG L +L +LD+  N++TT+P  IG L+ LQKL L+GN L +
Sbjct: 167 NLNLSEN--RLTTVPKEIGQLQNLQKLDLKGNRLTTVPKEIGQLQNLQKLDLKGNRLTT 223



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 100/159 (62%), Gaps = 3/159 (1%)

Query: 36  LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           ++VL++SG  L SLPK I   ++L+ L  + N+L  LP  I  EL NL+ L ++ N++VI
Sbjct: 50  VRVLNLSGQKLTSLPKEIGQLKNLQSLYLSDNQLTILPKEI-VELQNLEHLDLSENQLVI 108

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           LP  +  L +L+ LD   N L +LP+++  L NL++L   +N   L  LP  IG L +L 
Sbjct: 109 LPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLENLQMLWSPEN--RLAILPKEIGQLENLE 166

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L++S N++TT+P  IG L+ LQKL L+GN L + P ++
Sbjct: 167 NLNLSENRLTTVPKEIGQLQNLQKLDLKGNRLTTVPKEI 205



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 71/180 (39%), Positives = 103/180 (57%), Gaps = 3/180 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  NQL  LP  I  L  L+ LD+S N L  LP  I   ++L+ L+   N
Sbjct: 68  GQLKNLQSLYLSDNQLTILPKEIVELQNLEHLDLSENQLVILPNEIGRLKNLQSLDLYKN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  LP  IG +L NL+ L    N++ ILP+ +  L +L  L+   N L ++P+++  L 
Sbjct: 128 KLTTLPKEIG-QLENLQMLWSPENRLAILPKEIGQLENLENLNLSENRLTTVPKEIGQLQ 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++  N   L T+P  IG L +L +LD+  N++TTL D IG L+ LQKL L  N L
Sbjct: 187 NLQKLDLKGN--RLTTVPKEIGQLQNLQKLDLKGNRLTTLSDEIGQLKNLQKLYLIDNQL 244



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 76/135 (56%), Gaps = 1/135 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  LD++ N+L  LP  IG L  L++L    N L  LPK I    +LE LN + N
Sbjct: 114 GRLKNLQSLDLYKNKLTTLPKEIGQLENLQMLWSPENRLAILPKEIGQLENLENLNLSEN 173

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  IG +L NL+ L +  N++  +P+ +  L +L+ LD + N L +L +++  L 
Sbjct: 174 RLTTVPKEIG-QLQNLQKLDLKGNRLTTVPKEIGQLQNLQKLDLKGNRLTTLSDEIGQLK 232

Query: 128 NLEVLNISQNFQYLE 142
           NL+ L +  N   LE
Sbjct: 233 NLQKLYLIDNQLSLE 247


>gi|418709844|ref|ZP_13270630.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|418727665|ref|ZP_13286253.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409959023|gb|EKO22800.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|410770079|gb|EKR45306.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 280

 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 113/204 (55%), Gaps = 22/204 (10%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V  LD+ +NQL  LP  IG L +L+ L +S N L++LPK IE  + L  L  N N+L  
Sbjct: 38  DVQTLDLSNNQLITLPKEIGQLKELEWLSLSKNQLKTLPKEIEQLQKLRYLYLNDNQLTT 97

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG+ L  L+ L ++ N++  LP+ + +L  L  L+   N L +LP+++  L  L+V
Sbjct: 98  LPKEIGY-LKELQELDLSRNQLTTLPKEIEYLKDLESLNLINNQLTTLPKEIGQLKELQV 156

Query: 132 LNISQN--------FQYLE-------------TLPYSIGLLMSLVELDVSYNKITTLPDS 170
           L++S N         ++L+             TLP  IG L  L  LD+S+N++T L   
Sbjct: 157 LDLSNNQLTTLPNEIEFLKRLQELYLRNNQLTTLPKGIGYLKELWLLDLSFNQLTALSKG 216

Query: 171 IGCLRKLQKLSLEGNPLVSPPMDV 194
           IG L+KLQKL L  N L + P ++
Sbjct: 217 IGYLKKLQKLDLSRNQLTTLPKEI 240



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 102/174 (58%), Gaps = 3/174 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L ++ NQL  LP  IG L +L+ LD+S N L +LPK IE  + LE LN   N+L  LP  
Sbjct: 88  LYLNDNQLTTLPKEIGYLKELQELDLSRNQLTTLPKEIEYLKDLESLNLINNQLTTLPKE 147

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L  L+ L ++ N++  LP  +  L  L+ L  R N L +LP+ +  L  L +L++S
Sbjct: 148 IG-QLKELQVLDLSNNQLTTLPNEIEFLKRLQELYLRNNQLTTLPKGIGYLKELWLLDLS 206

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
             F  L  L   IG L  L +LD+S N++TTLP  I  L+KL++L L+  P++ 
Sbjct: 207 --FNQLTALSKGIGYLKKLQKLDLSRNQLTTLPKEIETLKKLEELFLDDIPVLK 258



 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 31/48 (64%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEEL 62
           +LD+  NQL  L   IG L KL+ LD+S N L +LPK IE  + LEEL
Sbjct: 202 LLDLSFNQLTALSKGIGYLKKLQKLDLSRNQLTTLPKEIETLKKLEEL 249


>gi|186686076|ref|YP_001869272.1| Miro domain-containing protein [Nostoc punctiforme PCC 73102]
 gi|186468528|gb|ACC84329.1| Miro domain protein [Nostoc punctiforme PCC 73102]
          Length = 1109

 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 107/189 (56%), Gaps = 3/189 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + SNQL  LP  IG L+ L+ L +  N L SLP  I    +L+ L+   N
Sbjct: 59  GQLTNLQTLHLRSNQLSSLPPEIGQLTNLQTLHLGNNQLSSLPPEIGQLTNLQSLHLWIN 118

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL++L ++ N++  LP     LT+L+ LD   N L SLP ++  L 
Sbjct: 119 QLSSLPPEIG-QLTNLQSLDLDSNQLSSLPPEFGQLTNLQSLDLGSNQLSSLPPEIGQLT 177

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L++S+N   L +LP  I  L  L  LD+  N++++LP   G L KLQ L L  N L
Sbjct: 178 KLQSLDLSRN--QLSSLPPEIVQLTKLQSLDLRSNQLSSLPPEFGQLTKLQSLDLGSNQL 235

Query: 188 VSPPMDVVE 196
            S P ++V+
Sbjct: 236 SSLPPEIVQ 244



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/189 (40%), Positives = 107/189 (56%), Gaps = 3/189 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+ SNQL  LP  IG L+KL+ LD+S N L SLP  I     L+ L+   N
Sbjct: 151 GQLTNLQSLDLGSNQLSSLPPEIGQLTKLQSLDLSRNQLSSLPPEIVQLTKLQSLDLRSN 210

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP   G +L  L++L +  N++  LP  +  LT L+ LD   N L SLP ++  L 
Sbjct: 211 QLSSLPPEFG-QLTKLQSLDLGSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQLT 269

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++S N   L +LP  I  L  L  L +S N++++LP  I  L KLQ L L  N L
Sbjct: 270 NLQSLDLSSN--QLSSLPPEIVQLTKLQSLYLSSNQLSSLPPEIVQLTKLQSLDLGSNQL 327

Query: 188 VSPPMDVVE 196
            S P ++V+
Sbjct: 328 SSLPPEIVQ 336



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/184 (40%), Positives = 103/184 (55%), Gaps = 3/184 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + SNQL  LP  IG L+ L+ L +  N L SLP  I    +L+ L+   N
Sbjct: 36  GQLTNLQTLHLDSNQLSSLPPKIGQLTNLQTLHLRSNQLSSLPPEIGQLTNLQTLHLGNN 95

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL++L +  N++  LP  +  LT+L+ LD   N L SLP +   L 
Sbjct: 96  QLSSLPPEIG-QLTNLQSLHLWINQLSSLPPEIGQLTNLQSLDLDSNQLSSLPPEFGQLT 154

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++  N   L +LP  IG L  L  LD+S N++++LP  I  L KLQ L L  N L
Sbjct: 155 NLQSLDLGSN--QLSSLPPEIGQLTKLQSLDLSRNQLSSLPPEIVQLTKLQSLDLRSNQL 212

Query: 188 VSPP 191
            S P
Sbjct: 213 SSLP 216



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/184 (38%), Positives = 103/184 (55%), Gaps = 3/184 (1%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           V  LD+    L  LP  IG L+ L+ L +  N L SLP  I    +L+ L+   N+L  L
Sbjct: 18  VTELDLSYKGLTILPPEIGQLTNLQTLHLDSNQLSSLPPKIGQLTNLQTLHLRSNQLSSL 77

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P  IG +L NL+TL +  N++  LP  +  LT+L+ L   +N L SLP ++  L NL+ L
Sbjct: 78  PPEIG-QLTNLQTLHLGNNQLSSLPPEIGQLTNLQSLHLWINQLSSLPPEIGQLTNLQSL 136

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
           ++  N   L +LP   G L +L  LD+  N++++LP  IG L KLQ L L  N L S P 
Sbjct: 137 DLDSN--QLSSLPPEFGQLTNLQSLDLGSNQLSSLPPEIGQLTKLQSLDLSRNQLSSLPP 194

Query: 193 DVVE 196
           ++V+
Sbjct: 195 EIVQ 198



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/189 (38%), Positives = 107/189 (56%), Gaps = 3/189 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  +  LD+ SNQL  LP  I  L+KL+ LD+  N L SLP  I    +L+ L+ + N
Sbjct: 220 GQLTKLQSLDLGSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQLTNLQSLDLSSN 279

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L  L++L ++ N++  LP  +  LT L+ LD   N L SLP ++  L 
Sbjct: 280 QLSSLPPEI-VQLTKLQSLYLSSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQLT 338

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L++  N   L +LP  I  L +L  LD+S N++++LP  I  L KLQ L L  N L
Sbjct: 339 KLQSLDLGSN--QLSSLPPEIVQLTNLQSLDLSSNQLSSLPPEIVQLTKLQSLYLSSNQL 396

Query: 188 VSPPMDVVE 196
            S P ++V+
Sbjct: 397 SSLPPEIVQ 405



 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 71/184 (38%), Positives = 101/184 (54%), Gaps = 3/184 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+ SNQL  LP  I  L+KL+ L +S N L SLP  I     L+ L+   N
Sbjct: 266 VQLTNLQSLDLSSNQLSSLPPEIVQLTKLQSLYLSSNQLSSLPPEIVQLTKLQSLDLGSN 325

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L  L++L +  N++  LP  +  LT+L+ LD   N L SLP ++  L 
Sbjct: 326 QLSSLPPEI-VQLTKLQSLDLGSNQLSSLPPEIVQLTNLQSLDLSSNQLSSLPPEIVQLT 384

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L +S N   L +LP  I  L  L  LD+  N++++LP  I  L  L+KL L  NP+
Sbjct: 385 KLQSLYLSSN--QLSSLPPEIVQLTKLQSLDLGSNQLSSLPREIRQLSNLKKLDLRRNPV 442

Query: 188 VSPP 191
             PP
Sbjct: 443 PIPP 446



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 102/187 (54%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  +  LD+ SNQL  LP  I  L+ L+ LD+S N L SLP  I     L+ L  + N
Sbjct: 243 VQLTKLQSLDLGSNQLSSLPPEIVQLTNLQSLDLSSNQLSSLPPEIVQLTKLQSLYLSSN 302

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L  L++L +  N++  LP  +  LT L+ LD   N L SLP ++  L 
Sbjct: 303 QLSSLPPEI-VQLTKLQSLDLGSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQLT 361

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++S N   L +LP  I  L  L  L +S N++++LP  I  L KLQ L L  N L
Sbjct: 362 NLQSLDLSSN--QLSSLPPEIVQLTKLQSLYLSSNQLSSLPPEIVQLTKLQSLDLGSNQL 419

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 420 SSLPREI 426


>gi|124004137|ref|ZP_01688983.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123990207|gb|EAY29706.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 313

 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/188 (38%), Positives = 106/188 (56%), Gaps = 4/188 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+   L N+  L +  N L  LP+S+G L +L+ L +  N L  LP ++     L  
Sbjct: 113 LPESI-GNLPNLHELHLTHNHLTQLPDSLGQLHQLRKLYLGYNQLTQLPNSLYRASQLHS 171

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  ++N L+ LPDT G +   L+   +N NK+ +LP ++  L  L+ L    N L  LPE
Sbjct: 172 LYLHYNHLQALPDTFG-KFSQLEECYLNANKLTVLPDNIGTLKHLKTLTLHNNQLTILPE 230

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L  L++L++S N  YL +LP SI  L SL  L++ +N+ T+LP  IG L  LQKL 
Sbjct: 231 SIGELAQLQMLDLSSN--YLTSLPNSIRQLQSLQTLNLRFNQFTSLPPEIGHLYYLQKLI 288

Query: 182 LEGNPLVS 189
           L+ NPL  
Sbjct: 289 LKDNPLTQ 296



 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 97/173 (56%), Gaps = 3/173 (1%)

Query: 22  QLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELI 81
           Q+  LP +IG LS  +VL + GNLL SLP++I N  +L EL+   N L QLPD++G +L 
Sbjct: 86  QMNSLPENIGLLSHTEVLKLVGNLLSSLPESIGNLPNLHELHLTHNHLTQLPDSLG-QLH 144

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
            L+ L +  N++  LP SL   + L  L    N L++LP+       LE   ++ N   L
Sbjct: 145 QLRKLYLGYNQLTQLPNSLYRASQLHSLYLHYNHLQALPDTFGKFSQLEECYLNAN--KL 202

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP +IG L  L  L +  N++T LP+SIG L +LQ L L  N L S P  +
Sbjct: 203 TVLPDNIGTLKHLKTLTLHNNQLTILPESIGELAQLQMLDLSSNYLTSLPNSI 255



 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 1/72 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++PES+   L  + +LD+ SN L  LPNSI  L  L+ L++  N   SLP  I +   L+
Sbjct: 227 ILPESI-GELAQLQMLDLSSNYLTSLPNSIRQLQSLQTLNLRFNQFTSLPPEIGHLYYLQ 285

Query: 61  ELNANFNKLRQL 72
           +L    N L Q 
Sbjct: 286 KLILKDNPLTQF 297


>gi|421126392|ref|ZP_15586625.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410436101|gb|EKP85224.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 267

 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 105/178 (58%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQ   LP  IG L  L+VL+++GN L SLPK I   ++LE L+   N
Sbjct: 60  GQLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGN 119

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP  IG +L  L+ L+++ N+  I P+ +    SL+ L    + LK+LP+++  L 
Sbjct: 120 QFTSLPKEIG-QLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQ 178

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ L++  N   L +LP  IG L +L EL++  NK+ TLP  IG L+KL+ L L  N
Sbjct: 179 NLQSLHLDSN--QLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIGQLQKLEVLRLYSN 234



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 115/216 (53%), Gaps = 23/216 (10%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L++  NQL  LP  IG L  L+VL+++GN   SLPK I   ++LE L+ + N+   
Sbjct: 18  NLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTS 77

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ L++  N++  LP+ +  L +L  LD   N   SLP+++  L  LE 
Sbjct: 78  LPKEIG-QLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEA 136

Query: 132 LNISQN---------------------FQYLETLPYSIGLLMSLVELDVSYNKITTLPDS 170
           LN+  N                        L+TLP  I LL +L  L +  N++T+LP  
Sbjct: 137 LNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLTSLPKE 196

Query: 171 IGCLRKLQKLSLEGNPLVSPPMDVVE-QGLSAVKGY 205
           IG L+ L +L+L+ N L + P ++ + Q L  ++ Y
Sbjct: 197 IGQLQNLFELNLQDNKLKTLPKEIGQLQKLEVLRLY 232



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 99/175 (56%), Gaps = 3/175 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           ++L+ LP  IG    L+ L++ GN L SLPK I   ++L  LN   N+   LP  IG +L
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG-QL 62

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            NL+ L ++ N+   LP+ +  L +LRVL+   N L SLP+++  L NLE L+++ N   
Sbjct: 63  QNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGN--Q 120

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
             +LP  IG L  L  L++ +N+ T  P  I   + L+ L L G+ L + P +++
Sbjct: 121 FTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEIL 175



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 61/152 (40%), Positives = 93/152 (61%), Gaps = 3/152 (1%)

Query: 46  LESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTS 105
           LESLP+ I   ++LE+LN + N+L  LP  IG +L NL+ L++  N+   LP+ +  L +
Sbjct: 6   LESLPRVIGLFQNLEKLNLDGNQLTSLPKEIG-QLQNLRVLNLAGNQFTSLPKEIGQLQN 64

Query: 106 LRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
           L  LD   N   SLP+++  L NL VLN++ N   L +LP  IG L +L  LD++ N+ T
Sbjct: 65  LERLDLDGNQFTSLPKEIGQLQNLRVLNLAGN--QLTSLPKEIGQLQNLERLDLAGNQFT 122

Query: 166 TLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQ 197
           +LP  IG L+KL+ L+L+ N     P ++ +Q
Sbjct: 123 SLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQ 154



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 2/82 (2%)

Query: 113 LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
           L+ L+SLP  +    NLE LN+  N   L +LP  IG L +L  L+++ N+ T+LP  IG
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGN--QLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60

Query: 173 CLRKLQKLSLEGNPLVSPPMDV 194
            L+ L++L L+GN   S P ++
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEI 82


>gi|24215150|ref|NP_712631.1| hypothetical protein LA_2450 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074468|ref|YP_005988785.1| hypothetical protein LIF_A2010 [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196220|gb|AAN49649.1| hypothetical protein LA_2450 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458257|gb|AER02802.1| hypothetical protein LIF_A2010 [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 633

 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/186 (40%), Positives = 107/186 (57%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  LD+  NQL   P  I  L KL+ LD+S N L  LP  I   ++L+EL    NK
Sbjct: 71  QLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNK 130

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L   P  IG +L NL+TL++  N++  LP  +  L +L  L+ R N L  LP+++  L N
Sbjct: 131 LITFPKEIG-QLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQN 189

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ LN+  N   L TLP  IG L +L  L +S N++TT P  IG L  LQ+L+L+ N L 
Sbjct: 190 LQTLNLQDN--QLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLT 247

Query: 189 SPPMDV 194
           + P ++
Sbjct: 248 ALPKEI 253



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 111/194 (57%), Gaps = 4/194 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+P  +  RL N+  L ++ N+L   P  IG L  L+ L++  N L +LP  I   ++LE
Sbjct: 110 MLPNEI-GRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLE 168

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +LN   N+L  LP  IG +L NL+TL++  N++  LP  +  L +L+ L    N L + P
Sbjct: 169 KLNLRKNRLTVLPKEIG-QLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFP 227

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++  L NL+ LN+  N   L  LP  IG L +L  L++S N++TT P  IG L+KL+ L
Sbjct: 228 KEIGQLENLQELNLKWN--RLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLRDL 285

Query: 181 SLEGNPLVSPPMDV 194
            L  N L + P ++
Sbjct: 286 GLGRNQLTTFPKEI 299



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 111/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  NQL  LP  IG L  L+ L +S N L + PK I    +L+ELN  +N
Sbjct: 185 GQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWN 244

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L ++ N++   P+ +  L  LR L    N L + P+++  L 
Sbjct: 245 RLTALPKEIG-QLKNLENLELSENQLTTFPKEIGQLKKLRDLGLGRNQLTTFPKEIGQLK 303

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L++  N    +T+   IG L +L++L++SYN++ TLP  IG L+KLQ LSL  N L
Sbjct: 304 NLQMLDLCYN--QFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQL 361

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 362 TTLPKEI 368



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/174 (40%), Positives = 98/174 (56%), Gaps = 3/174 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           NQL  LP  IG L KL+ L +  N L +LPK I   ++L  L+   N+L  LP  IG +L
Sbjct: 336 NQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIG-QL 394

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            NL  L +  N++   P+ +  L +L+ LD   N L +LP+++  L NLE L +S+N   
Sbjct: 395 KNLYNLGLGRNQLATFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSEN--Q 452

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L T P  IG L  L +L +SYN++  LP  IG L KLQ L L  N LV  P ++
Sbjct: 453 LTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRLVILPKEI 506



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 112/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+ +N+L  LP  IG L  L+ L++S N L + PK I   + L++L  ++N
Sbjct: 415 GQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYN 474

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L  L+ L ++ N++VILP+ +  L +L++LD   N  K++ +++  L 
Sbjct: 475 RLVILPKEIG-QLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLK 533

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  LN+S N   L TLP  IG L +L  LD+  N++TTLP  IG L+ L  L L  N L
Sbjct: 534 NLLQLNLSYN--QLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQL 591

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 592 TTLPKEI 598



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 102/184 (55%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           LNV VL++       LP  I  L  L+ LD+  N L + P  I   + LE L+ + N+L 
Sbjct: 50  LNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLV 109

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ IG  L NL+ L +  NK++  P+ +  L +L+ L+ + N L +LP ++  L NLE
Sbjct: 110 MLPNEIG-RLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLE 168

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+ +N   L  LP  IG L +L  L++  N++ TLP  IG L+ LQ L L  N L + 
Sbjct: 169 KLNLRKN--RLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTF 226

Query: 191 PMDV 194
           P ++
Sbjct: 227 PKEI 230



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 104/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +LD+  NQ K +   IG L  L  L++S N L +LP  I   + L++L+   N
Sbjct: 300 GQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRN 359

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL  L +  N++  LP+ +  L +L  L    N L + P+++  L 
Sbjct: 360 QLTTLPKEIG-QLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLATFPKEIGQLE 418

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++  N   L  LP  IG L +L  L++S N++TT P  IG L+KLQ L L  N L
Sbjct: 419 NLQELDLWNN--RLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRL 476

Query: 188 VSPPMDV 194
           V  P ++
Sbjct: 477 VILPKEI 483



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +  ++RVL+       +LP+++E L NL+ L++  N   L T P  I  L  L 
Sbjct: 42  LTEALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDN--QLATFPAVIVELQKLE 99

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LD+S N++  LP+ IG L+ LQ+L L  N L++ P ++
Sbjct: 100 SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEI 138



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 4/79 (5%)

Query: 117 KSLPEDLENLINLEVLNIS-QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLR 175
           + L E L+N +N+ VLN+S QNF    TLP  I  L +L ELD+  N++ T P  I  L+
Sbjct: 40  RDLTEALQNPLNVRVLNLSGQNF---TTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQ 96

Query: 176 KLQKLSLEGNPLVSPPMDV 194
           KL+ L L  N LV  P ++
Sbjct: 97  KLESLDLSENRLVMLPNEI 115



 Score = 40.8 bits (94), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 30/57 (52%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           NQL  LP  IG L  L  LD+  N L +LPK I   ++L  L    N+L  LP  IG
Sbjct: 543 NQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEIG 599


>gi|125810355|ref|XP_001361460.1| GA10197 [Drosophila pseudoobscura pseudoobscura]
 gi|54636635|gb|EAL26038.1| GA10197 [Drosophila pseudoobscura pseudoobscura]
          Length = 848

 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/180 (38%), Positives = 113/180 (62%), Gaps = 3/180 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           VL V+SN L+ +P +IG L +L+ LD++ NL+ ++P  I+ C+ L  L+ + N L++LPD
Sbjct: 67  VLHVNSNNLESIPQAIGSLRQLQNLDLNRNLIVNVPDEIKACKHLTRLDLSCNSLQRLPD 126

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            +   LI+L+ L +N   +  LP +   L +LR+L+ RLN L +LP+ +  L+NL+ L+I
Sbjct: 127 AVT-SLISLQELLLNETYLEFLPANFGRLVNLRILELRLNNLITLPKSMVRLVNLQRLDI 185

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N ++ E LP  +G L SL EL + +N+I  +  +IG LR+LQ     GN L + P ++
Sbjct: 186 GGN-EFTE-LPEVVGELKSLRELWIDFNQIRRVSANIGKLRELQHFEANGNLLDTLPSEL 243



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 115/193 (59%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+++T+ L+++  L ++   L+ LP + G L  L++L++  N L +LPK++    +L+ 
Sbjct: 124 LPDAVTS-LISLQELLLNETYLEFLPANFGRLVNLRILELRLNNLITLPKSMVRLVNLQR 182

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+  +LP+ +G EL +L+ L I+ N+I  +  ++  L  L+  +A  N L +LP 
Sbjct: 183 LDIGGNEFTELPEVVG-ELKSLRELWIDFNQIRRVSANIGKLRELQHFEANGNLLDTLPS 241

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L N  N+EVL+I  N   LE  P+S+G+L SLV      N +T LPDSI  L +L++L 
Sbjct: 242 ELSNWRNVEVLSICSN--NLEAFPFSVGMLKSLVTFKCESNGLTELPDSISYLEQLEELV 299

Query: 182 LEGNPLVSPPMDV 194
           L  N L+  P  +
Sbjct: 300 LSHNKLIRLPSTI 312



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/152 (38%), Positives = 82/152 (53%), Gaps = 3/152 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV VL + SN L+  P S+G L  L       N L  LP +I     LEEL  + NKL +
Sbjct: 248 NVEVLSICSNNLEAFPFSVGMLKSLVTFKCESNGLTELPDSISYLEQLEELVLSHNKLIR 307

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP TIG  L +L+ L  + N++  LP  L     L VL    N L +LP+++ NL  L+V
Sbjct: 308 LPSTIGM-LRSLRFLFADENQLRQLPDELCSCQQLSVLSMANNQLSALPQNIGNLGKLKV 366

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           +N+  N  Y+  LP S+  L++L  L +S N+
Sbjct: 367 INVVNN--YINALPVSMLNLVNLTSLWLSDNQ 396



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 92/181 (50%), Gaps = 3/181 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD  +  L   P        L+ L +S   L+SLP  +  C+ L  L+ N N L  +P  
Sbjct: 22  LDYSNTPLTDFPEVWQHERTLEELYLSTTRLQSLPPQLFYCQGLRVLHVNSNNLESIPQA 81

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L  L+ L +N N IV +P  +     L  LD   N L+ LP+ + +LI+L+ L ++
Sbjct: 82  IG-SLRQLQNLDLNRNLIVNVPDEIKACKHLTRLDLSCNSLQRLPDAVTSLISLQELLLN 140

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
           +   YLE LP + G L++L  L++  N + TLP S+  L  LQ+L + GN     P  V 
Sbjct: 141 ET--YLEFLPANFGRLVNLRILELRLNNLITLPKSMVRLVNLQRLDIGGNEFTELPEVVG 198

Query: 196 E 196
           E
Sbjct: 199 E 199



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 93/176 (52%), Gaps = 6/176 (3%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
            + + N L  LP+ +     ++VL +  N LE+ P ++   +SL       N L +LPD+
Sbjct: 229 FEANGNLLDTLPSELSNWRNVEVLSICSNNLEAFPFSVGMLKSLVTFKCESNGLTELPDS 288

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           I + L  L+ L ++ NK++ LP ++  L SLR L A  N L+ LP++L +   L VL+++
Sbjct: 289 ISY-LEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADENQLRQLPDELCSCQQLSVLSMA 347

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN---PLV 188
            N   L  LP +IG L  L  ++V  N I  LP S+  L  L  L L  N   PLV
Sbjct: 348 NN--QLSALPQNIGNLGKLKVINVVNNYINALPVSMLNLVNLTSLWLSDNQSQPLV 401


>gi|313236690|emb|CBY11947.1| unnamed protein product [Oikopleura dioica]
          Length = 1638

 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/171 (42%), Positives = 104/171 (60%), Gaps = 3/171 (1%)

Query: 26   LPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKT 85
            LP SIGCL KL  L++  NLLESLP +I N R+L  L+   N++R+LP   G +L  L  
Sbjct: 1125 LPASIGCLEKLTKLEIRENLLESLPDSICNLRNLLHLDLEENQIRELPVNFG-QLTKLTE 1183

Query: 86   LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
            L ++ N+I +LP+S  +L SL  +D   N ++ LPE+ +NL +LE++ +S+NF  LE LP
Sbjct: 1184 LILDKNEISVLPESFGNLESLIWVDLCGNRIEFLPENFKNLKSLEIITLSKNF--LERLP 1241

Query: 146  YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
            +S G + SL  L V  N++  L  SIG    L +L L  N L S P  V +
Sbjct: 1242 HSFGDMRSLSILKVDQNRLIELTPSIGLCENLTELVLTENLLSSLPDSVTQ 1292



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 109/204 (53%), Gaps = 5/204 (2%)

Query: 8    ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             +L  +  L +  N++  LP S G L  L  +D+ GN +E LP+  +N +SLE +  + N
Sbjct: 1176 GQLTKLTELILDKNEISVLPESFGNLESLIWVDLCGNRIEFLPENFKNLKSLEIITLSKN 1235

Query: 68   KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
             L +LP + G ++ +L  L ++ N+++ L  S+    +L  L    N L SLP+ +  L 
Sbjct: 1236 FLERLPHSFG-DMRSLSILKVDQNRLIELTPSIGLCENLTELVLTENLLSSLPDSVTQLT 1294

Query: 128  NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            +L  L + +N   L +LP++IG L  L  L V  N+++ LP+S+   + L+ + L  N L
Sbjct: 1295 HLTNLLVDRN--RLFSLPHNIGNLRELRTLHVRQNELSFLPESVAECKLLKVIDLAENEL 1352

Query: 188  VSPPMDVVEQGLSAVKGYLSEKMN 211
            +  P  V    L A+  +LSE  N
Sbjct: 1353 LFLPHGVKNLDLRAI--WLSENQN 1374


>gi|260812958|ref|XP_002601187.1| hypothetical protein BRAFLDRAFT_75632 [Branchiostoma floridae]
 gi|229286478|gb|EEN57199.1| hypothetical protein BRAFLDRAFT_75632 [Branchiostoma floridae]
          Length = 1577

 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 103/187 (55%), Gaps = 3/187 (1%)

Query: 22  QLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELI 81
           Q   LP  +G L+ +K L +S   L +LP  +     LE L+ + N L+ LP  +G +L 
Sbjct: 243 QTSTLPAKVGHLTNIKHLHLSHCQLHTLPPEVGRLTQLEWLDLSSNPLQTLPAEVG-QLT 301

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
            +K L ++  ++  LP  +  LT L  LD R N +++LP ++  L N++ L +S     L
Sbjct: 302 KVKHLDLSYCQLHTLPPEVGRLTQLERLDLRNNPIQTLPVEVGQLTNIKHLKLSHC--QL 359

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSA 201
            TLP  +G L  L  LD+S N + TLP  +G L  +  L + GNPL+ PP +V  QG+SA
Sbjct: 360 HTLPPEVGRLTQLEWLDLSSNPLQTLPAEVGQLTNVSYLHVSGNPLIKPPSEVCRQGISA 419

Query: 202 VKGYLSE 208
           ++ Y  E
Sbjct: 420 IRRYFDE 426



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 102/193 (52%), Gaps = 2/193 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ ++  L+N+  + +    L  LP  +  LS L+ LD+SGN   SLP  +    +++E
Sbjct: 107 LPDDMSG-LVNLTAIHLDWCNLDSLPPVVLKLSHLRSLDLSGNEQISLPDELCRLENIKE 165

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L      +  +P  +  +L  L+ L+++ N  + LP  L+ LT++RVL      + ++P 
Sbjct: 166 LRLYACFMATVPPAV-LKLTQLEKLNLSGNWGIHLPDGLSRLTNIRVLILLGTGMDTVPS 224

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
               L  LE L +S N     TLP  +G L ++  L +S+ ++ TLP  +G L +L+ L 
Sbjct: 225 VAWRLTQLERLYLSLNPLQTSTLPAKVGHLTNIKHLHLSHCQLHTLPPEVGRLTQLEWLD 284

Query: 182 LEGNPLVSPPMDV 194
           L  NPL + P +V
Sbjct: 285 LSSNPLQTLPAEV 297



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 91/175 (52%), Gaps = 3/175 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           + ++ L++    LK LP+ +  L  L+ LD+S N+   L   +    +L+ L+     L 
Sbjct: 23  MTLLTLELRYKNLKQLPDELFELKDLEALDLSRNMNMELSNGLIKLTNLKLLSLAGCNLA 82

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            +P  +  +L  L+TL ++ N+ + LP  ++ L +L  +      L SLP  +  L +L 
Sbjct: 83  TVPAAV-MKLPQLETLILSNNENITLPDDMSGLVNLTAIHLDWCNLDSLPPVVLKLSHLR 141

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            L++S N Q   +LP  +  L ++ EL +    + T+P ++  L +L+KL+L GN
Sbjct: 142 SLDLSGNEQI--SLPDELCRLENIKELRLYACFMATVPPAVLKLTQLEKLNLSGN 194



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 79/151 (52%), Gaps = 3/151 (1%)

Query: 46  LESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTS 105
           L+ LP  +   + LE L+ + N   +L + +  +L NLK LS+    +  +P ++  L  
Sbjct: 35  LKQLPDELFELKDLEALDLSRNMNMELSNGL-IKLTNLKLLSLAGCNLATVPAAVMKLPQ 93

Query: 106 LRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
           L  L    N   +LP+D+  L+NL  +++  ++  L++LP  +  L  L  LD+S N+  
Sbjct: 94  LETLILSNNENITLPDDMSGLVNLTAIHL--DWCNLDSLPPVVLKLSHLRSLDLSGNEQI 151

Query: 166 TLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           +LPD +  L  +++L L    + + P  V++
Sbjct: 152 SLPDELCRLENIKELRLYACFMATVPPAVLK 182


>gi|429962971|gb|ELA42515.1| hypothetical protein VICG_00614 [Vittaforma corneae ATCC 50505]
          Length = 835

 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 111/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A L  + +L +  N+LK LP+ IG + +L+ L +  N LES P  I   R L+ L+  +N
Sbjct: 179 AELKKLQILYLRGNKLKLLPDEIGEMKELRELGLDDNELESFPTVIAELRKLQTLDLGYN 238

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +    P T+  +L NL+ L +N NK+ +LP  +  L +LR L+ R N L++LP  +  L 
Sbjct: 239 EFESFP-TVIVKLKNLQYLFLNDNKLKLLPDEIGELENLRELNLRGNKLETLPPVIGELE 297

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL VL + +N   LE+LP  IG L +L  L++  NKI TLP +IG L+ L++L L  N L
Sbjct: 298 NLYVLELYKN--NLESLPDVIGKLKNLGMLNLGNNKIETLPAAIGELQNLRELYLSDNKL 355

Query: 188 VSPPMDV 194
            + P+++
Sbjct: 356 ETLPVEI 362



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/211 (34%), Positives = 103/211 (48%), Gaps = 24/211 (11%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL+N+  LD+  N LK LP  IG L  L+ LD+  N LESLP  IE  ++L+ L+   N
Sbjct: 64  GRLVNLEKLDLKGNNLKALPPEIGELKNLQHLDLRNNKLESLPPEIEELKNLQHLDLGDN 123

Query: 68  KLRQLP----------------------DTIGFELINLKTLSINCNKIVILPQSLTHLTS 105
           KL+ LP                       T+  +L NL+ L +N NK  + P  +  L  
Sbjct: 124 KLKALPYEVEELKNLQHLDLGYNQFESFPTVIRKLKNLERLILNNNKFGLFPIEIAELKK 183

Query: 106 LRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
           L++L  R N LK LP+++  +  L  L +  N   LE+ P  I  L  L  LD+ YN+  
Sbjct: 184 LQILYLRGNKLKLLPDEIGEMKELRELGLDDN--ELESFPTVIAELRKLQTLDLGYNEFE 241

Query: 166 TLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           + P  I  L+ LQ L L  N L   P ++ E
Sbjct: 242 SFPTVIVKLKNLQYLFLNDNKLKLLPDEIGE 272



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 98/186 (52%), Gaps = 3/186 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           ++  V+ +    ++ + + IG L  L+ LD+ GN L++LP  I   ++L+ L+   NKL 
Sbjct: 44  VDTTVISICRQGIRFIGSDIGRLVNLEKLDLKGNNLKALPPEIGELKNLQHLDLRNNKLE 103

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  I  EL NL+ L +  NK+  LP  +  L +L+ LD   N  +S P  +  L NLE
Sbjct: 104 SLPPEIE-ELKNLQHLDLGDNKLKALPYEVEELKNLQHLDLGYNQFESFPTVIRKLKNLE 162

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L ++ N       P  I  L  L  L +  NK+  LPD IG +++L++L L+ N L S 
Sbjct: 163 RLILNNN--KFGLFPIEIAELKKLQILYLRGNKLKLLPDEIGEMKELRELGLDDNELESF 220

Query: 191 PMDVVE 196
           P  + E
Sbjct: 221 PTVIAE 226



 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 52/134 (38%), Positives = 78/134 (58%), Gaps = 2/134 (1%)

Query: 5   SLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNA 64
           ++  +L N+  L ++ N+LK LP+ IG L  L+ L++ GN LE+LP  I    +L  L  
Sbjct: 245 TVIVKLKNLQYLFLNDNKLKLLPDEIGELENLRELNLRGNKLETLPPVIGELENLYVLEL 304

Query: 65  NFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLE 124
             N L  LPD IG +L NL  L++  NKI  LP ++  L +LR L    N L++LP ++E
Sbjct: 305 YKNNLESLPDVIG-KLKNLGMLNLGNNKIETLPAAIGELQNLRELYLSDNKLETLPVEIE 363

Query: 125 NLI-NLEVLNISQN 137
            L  +L +LN+  N
Sbjct: 364 KLSGSLRLLNLMGN 377



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 89/182 (48%), Gaps = 27/182 (14%)

Query: 5   SLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNA 64
           ++ A L  +  LD+  N+ +  P  I  L  L+ L ++ N L+ LP  I    +L ELN 
Sbjct: 222 TVIAELRKLQTLDLGYNEFESFPTVIVKLKNLQYLFLNDNKLKLLPDEIGELENLRELNL 281

Query: 65  NFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLE 124
             NKL  LP  IG                         L +L VL+   N L+SLP+ + 
Sbjct: 282 RGNKLETLPPVIG------------------------ELENLYVLELYKNNLESLPDVIG 317

Query: 125 NLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLR-KLQKLSLE 183
            L NL +LN+  N   +ETLP +IG L +L EL +S NK+ TLP  I  L   L+ L+L 
Sbjct: 318 KLKNLGMLNLGNN--KIETLPAAIGELQNLRELYLSDNKLETLPVEIEKLSGSLRLLNLM 375

Query: 184 GN 185
           GN
Sbjct: 376 GN 377


>gi|449279622|gb|EMC87166.1| Leucine-rich repeat protein SHOC-2 [Columba livia]
          Length = 582

 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 113/196 (57%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+P ++   L  +  L ++SN+L+ LP  +GCL  L  L +S N L SLP +++N + L 
Sbjct: 114 MLPSAI-KELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLR 172

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKLR++P  + + L +L TL +  N+I  + + + +L+ L +L  R N +K LP
Sbjct: 173 MLDLRHNKLREIPSVV-YRLSSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLP 231

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG  M +  LD+ +N++  LP++IG L  L +L
Sbjct: 232 AEIGELCNLITLDVAHN--QLEHLPEEIGSCMQITNLDLQHNELLDLPETIGNLSSLSRL 289

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N L + P  + +
Sbjct: 290 GLRYNRLSAIPKSLAK 305



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 111/241 (46%), Gaps = 51/241 (21%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +    + +  LD+  N+L  LP +IG LS L  L +  N L ++PK++  C  L+E
Sbjct: 253 LPEEI-GSCMQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKSLAKCSELDE 311

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSI--NC----------------------------- 90
           LN   N +  LP+ +   L+ L +L++  NC                             
Sbjct: 312 LNLENNNISALPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIP 371

Query: 91  -----------------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLN 133
                            N++  LP      TS+  L+   N L  +PED+  L++LEVL 
Sbjct: 372 FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLI 431

Query: 134 ISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMD 193
           +S N   L+ LP+ IG L  L ELD+  NK+ +LP+ I  L+ LQKL L  N L + P  
Sbjct: 432 LSNNL--LKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRG 489

Query: 194 V 194
           +
Sbjct: 490 I 490



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/159 (36%), Positives = 89/159 (55%), Gaps = 2/159 (1%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +V L++ +NQL  +P  +  L  L+VL +S NLL+ LP  I N R L EL+   NKL  L
Sbjct: 404 MVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESL 463

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P+ I + L +L+ L +  N++  LP+ + HLT+L  L    N L  LPE++  L NLE L
Sbjct: 464 PNEIAY-LKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEEL 522

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
            ++ N   L +LP+ + L   L  + +    ++ LP  I
Sbjct: 523 YLNDN-PNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 560



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 97/177 (54%), Gaps = 8/177 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 357 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  + +L  LR LD   N L+SLP ++  L +L
Sbjct: 415 TKIPEDVSG-LVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDL 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           + L ++ N   L TLP  IG L +L  L +  N +T LP+ IG L  L++L L  NP
Sbjct: 474 QKLVLTNN--QLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNP 528



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 96/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +PE L + L+ +  L +  N  +  P       S +  L++  N +  +P  I    + L
Sbjct: 322 LPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL 381

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP   G    ++  L++  N++  +P+ ++ L SL VL    N LK L
Sbjct: 382 SKLNMKDNQLTSLPLDFG-TWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  + NL  L  L++ +N   LE+LP  I  L  L +L ++ N++TTLP  IG L  L  
Sbjct: 441 PHGIGNLRKLRELDLEEN--KLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTH 498

Query: 180 LSLEGNPLVSPPMDV 194
           L L  N L   P ++
Sbjct: 499 LGLGENLLTHLPEEI 513



 Score = 37.0 bits (84), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 28/51 (54%)

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           +  LP +I  L  L EL +  NK+ +LP  +GCL  L  L+L  N L S P
Sbjct: 112 IHMLPSAIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162


>gi|224052809|ref|XP_002197870.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Taeniopygia guttata]
          Length = 582

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 109/192 (56%), Gaps = 3/192 (1%)

Query: 5   SLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNA 64
           S    L  +  L ++SN+L+CLP  +GCL  L  L +S N L SLP +++N + L  L+ 
Sbjct: 117 SAIKELTQLTELYLYSNKLQCLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDL 176

Query: 65  NFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLE 124
             NKLR++P  + + L +L TL +  N+I  + + + +L+ L +L  R N +K LP ++ 
Sbjct: 177 RHNKLREIPSVV-YRLSSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIG 235

Query: 125 NLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEG 184
            L NL  L+++ N   LE LP  IG    +  LD+ +N++  LP++IG L  L +L L  
Sbjct: 236 ELCNLITLDVAHN--QLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRY 293

Query: 185 NPLVSPPMDVVE 196
           N L + P  + +
Sbjct: 294 NRLSAIPKSLAK 305



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 106/230 (46%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N+L  LP +IG LS L  L +  N L ++PK++  C  L+ELN   N +  L
Sbjct: 263 ITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISTL 322

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+ +   L+ L +L++  NC                                        
Sbjct: 323 PEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLS 382

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N L  +PED+  L++LEVL +S N   L+ L
Sbjct: 383 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKL 440

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ IG L  L ELD+  NK+ +LP+ I  L+ LQKL L  N L + P  +
Sbjct: 441 PHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/159 (36%), Positives = 89/159 (55%), Gaps = 2/159 (1%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +V L++ +NQL  +P  +  L  L+VL +S NLL+ LP  I N R L EL+   NKL  L
Sbjct: 404 MVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESL 463

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P+ I + L +L+ L +  N++  LP+ + HLT+L  L    N L  LPE++  L NLE L
Sbjct: 464 PNEIAY-LKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEEL 522

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
            ++ N   L +LP+ + L   L  + +    ++ LP  I
Sbjct: 523 YLNDN-PNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 560



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 101/183 (55%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N + LD+    +  LP++I  L++L  L +  N L+ LP  +    +L  L  + N L  
Sbjct: 101 NSMRLDLSKRSIHLLPSAIKELTQLTELYLYSNKLQCLPAEVGCLVNLVTLALSENSLTS 160

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LPD++   L  L+ L +  NK+  +P  +  L+SL  L  R N + ++ +D++NL  L +
Sbjct: 161 LPDSLD-NLKKLRMLDLRHNKLREIPSVVYRLSSLATLYLRFNRITTVEKDIKNLSKLTM 219

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L+I +N   ++ LP  IG L +L+ LDV++N++  LP+ IG   ++  L L+ N L+  P
Sbjct: 220 LSIREN--KIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLP 277

Query: 192 MDV 194
             +
Sbjct: 278 ETI 280



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 97/177 (54%), Gaps = 8/177 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 357 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  + +L  LR LD   N L+SLP ++  L +L
Sbjct: 415 TKIPEDVSG-LVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDL 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           + L ++ N   L TLP  IG L +L  L +  N +T LP+ IG L  L++L L  NP
Sbjct: 474 QKLVLTNN--QLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNP 528



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 96/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +PE L + L+ +  L +  N  +  P       S +  L++  N +  +P  I    + L
Sbjct: 322 LPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL 381

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP   G    ++  L++  N++  +P+ ++ L SL VL    N LK L
Sbjct: 382 SKLNMKDNQLTSLPLDFG-TWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  + NL  L  L++ +N   LE+LP  I  L  L +L ++ N++TTLP  IG L  L  
Sbjct: 441 PHGIGNLRKLRELDLEEN--KLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTH 498

Query: 180 LSLEGNPLVSPPMDV 194
           L L  N L   P ++
Sbjct: 499 LGLGENLLTHLPEEI 513


>gi|421110794|ref|ZP_15571285.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803891|gb|EKS10018.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 558

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 107/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  +  L + +NQLK LP  IG L  LK L +  N LES PK I    +L+ L+  +N
Sbjct: 289 GKLQRLEWLGLANNQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYN 348

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
               LP  IG  L  L  L++  N++  LPQ +  L  L  L+   N L +LP+++  L 
Sbjct: 349 GFTTLPQEIG-TLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLR 407

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L ++ N   L TLP  IG L +L +LD+ YN++ TLP++IG L++L+ LSL+ N L
Sbjct: 408 KLQHLYLANN--QLATLPKEIGQLQNLEDLDLEYNQLATLPEAIGTLQRLEWLSLKNNQL 465

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 466 TTLPEEI 472



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/215 (35%), Positives = 118/215 (54%), Gaps = 23/215 (10%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +  +L N+  L + +NQL  LP  I  L KLK L +S N L +LPK I   + LE
Sbjct: 53  VLPQEI-GKLQNLFSLYLENNQLTTLPQEIETLQKLKWLYLSENQLATLPKEIGKLQRLE 111

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L    N+L  +P  IG  L +L+ LS+  N+++ LPQ +  L  L  L+   N L++LP
Sbjct: 112 RLYLGGNQLTTIPQEIG-ALQDLEELSLYNNQLITLPQEIGTLQDLEELNLANNQLRTLP 170

Query: 121 EDLENLINLEVLNIS--------------QNFQYLE-------TLPYSIGLLMSLVELDV 159
           +++  L +L+ LN+               QN +YL        TLP  IG L +L +L+V
Sbjct: 171 KEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLKYLRLAYNQLTTLPKEIGRLENLQDLNV 230

Query: 160 SYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N++ TLP  IG L+ LQ L+LE N L++ P ++
Sbjct: 231 FNNQLITLPQEIGTLQNLQSLNLENNRLITLPKEI 265



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 100/184 (54%), Gaps = 3/184 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L +  N    LP  IG L +L  L++  N L +LP+ I     LE LN   N+L  
Sbjct: 339 NLQRLHLEYNGFTTLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLAT 398

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG  L  L+ L +  N++  LP+ +  L +L  LD   N L +LPE +  L  LE 
Sbjct: 399 LPKEIG-TLRKLQHLYLANNQLATLPKEIGQLQNLEDLDLEYNQLATLPEAIGTLQRLEW 457

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L++  N   L TLP  IG L  +V+L+++ N++ TLP  IG L+ L+ L L GNP  + P
Sbjct: 458 LSLKNN--QLTTLPEEIGTLQKIVKLNLANNQLRTLPQEIGQLQNLKDLDLSGNPFTTFP 515

Query: 192 MDVV 195
            ++V
Sbjct: 516 QEIV 519



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 110/207 (53%), Gaps = 26/207 (12%)

Query: 11  LNVVVLDVHSNQLKCLPNSIG-----------------------CLSKLKVLDVSGNLLE 47
           ++V +LD+  NQL  LP  IG                        L KLK L +S N L 
Sbjct: 39  MDVWMLDLTRNQLTVLPQEIGKLQNLFSLYLENNQLTTLPQEIETLQKLKWLYLSENQLA 98

Query: 48  SLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
           +LPK I   + LE L    N+L  +P  IG  L +L+ LS+  N+++ LPQ +  L  L 
Sbjct: 99  TLPKEIGKLQRLERLYLGGNQLTTIPQEIG-ALQDLEELSLYNNQLITLPQEIGTLQDLE 157

Query: 108 VLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+   N L++LP+++  L +L+ LN+  N   L TLP  IG L +L  L ++YN++TTL
Sbjct: 158 ELNLANNQLRTLPKEIGTLQHLQDLNVFNN--QLITLPQEIGTLQNLKYLRLAYNQLTTL 215

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P  IG L  LQ L++  N L++ P ++
Sbjct: 216 PKEIGRLENLQDLNVFNNQLITLPQEI 242



 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 101/187 (54%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L +  NQL  LP  IG L  L+ L+V  N L +LP+ I   ++L+ LN   N
Sbjct: 197 GTLQNLKYLRLAYNQLTTLPKEIGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENN 256

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG  L  L+ L +  N++  LP+ +  L  L  L    N LKSLP+++  L 
Sbjct: 257 RLITLPKEIG-TLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLANNQLKSLPQEIGKLQ 315

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +  N   LE+ P  IG L +L  L + YN  TTLP  IG L +L  L+LE N L
Sbjct: 316 NLKELILENN--RLESFPKEIGTLSNLQRLHLEYNGFTTLPQEIGTLHRLPWLNLEHNQL 373

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 374 TTLPQEI 380



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 106/187 (56%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  L+V +NQL  LP  IG L  L+ L++  N L +LPK I   + LE L    N
Sbjct: 220 GRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLITLPKEIGTLQKLEWLYLTNN 279

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L  L+ L +  N++  LPQ +  L +L+ L    N L+S P+++  L 
Sbjct: 280 QLATLPKEIG-KLQRLEWLGLANNQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLS 338

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++  N     TLP  IG L  L  L++ +N++TTLP  IG L +L+ L+L  N L
Sbjct: 339 NLQRLHLEYNG--FTTLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRL 396

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 397 ATLPKEI 403



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 83/164 (50%), Gaps = 26/164 (15%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL  +  L++++N+L  LP  IG L KL+ L ++ N L +LPK I   ++LE+L+  +N
Sbjct: 381 GRLERLEWLNLYNNRLATLPKEIGTLRKLQHLYLANNQLATLPKEIGQLQNLEDLDLEYN 440

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG                         L  L  L  + N L +LPE++  L 
Sbjct: 441 QLATLPEAIG------------------------TLQRLEWLSLKNNQLTTLPEEIGTLQ 476

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
            +  LN++ N   L TLP  IG L +L +LD+S N  TT P  I
Sbjct: 477 KIVKLNLANN--QLRTLPQEIGQLQNLKDLDLSGNPFTTFPQEI 518



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   + +LD   N L  LP+++  L NL  L +  N   L TLP  I  L  L 
Sbjct: 31  LNEALKNPMDVWMLDLTRNQLTVLPQEIGKLQNLFSLYLENN--QLTTLPQEIETLQKLK 88

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L +S N++ TLP  IG L++L++L L GN L + P ++
Sbjct: 89  WLYLSENQLATLPKEIGKLQRLERLYLGGNQLTTIPQEI 127


>gi|359728059|ref|ZP_09266755.1| hypothetical protein Lwei2_14517 [Leptospira weilii str.
           2006001855]
          Length = 576

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 121/217 (55%), Gaps = 23/217 (10%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +   L N+ +L+V  N++   P  IG L  LK LD+S N ++ + + +   R+LE
Sbjct: 155 ILPKGI-GELSNLKILNVSYNKVSVFPEEIGKLQNLKDLDLSNNRIQVVSEKVGKLRNLE 213

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            LN   N+L  LP  IG +L NL+TL++  NK+  +P+ +  L SL+ LD   N LK LP
Sbjct: 214 RLNLIENRLTVLPKEIG-QLQNLQTLNLGYNKLANIPKEIGELRSLKELDLSDNELKVLP 272

Query: 121 EDLENLINLEVLNIS--------------QNFQYLE-------TLPYSIGLLMSLVELDV 159
           ++L  + NL+ L ++              QN + L+        LP  IG L +L  LD+
Sbjct: 273 KELGTIANLQSLKLNDNRIVNLPKEIELLQNLRSLDLSGNQFKVLPKEIGRLQNLQSLDL 332

Query: 160 SYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           S N+ TTLP  +G LR L+KL+++ NPL+    D ++
Sbjct: 333 SDNQFTTLPSEVGELRNLKKLNIDSNPLLPGEKDKIQ 369



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/213 (36%), Positives = 121/213 (56%), Gaps = 9/213 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE +  RL  +  LD++ N+L+ LP  IG L  L  L +S N L +LP  I+  ++L+ 
Sbjct: 87  IPEEI-KRLQKLQSLDLYGNRLEALPPEIGQLQNLSWLSLSKNQLATLPAEIKLLQNLQY 145

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + ++L  LP  IG EL NLK L+++ NK+ + P+ +  L +L+ LD   N ++ + E
Sbjct: 146 LNLSKDRLTILPKGIG-ELSNLKILNVSYNKVSVFPEEIGKLQNLKDLDLSNNRIQVVSE 204

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L NLE LN+ +N   L  LP  IG L +L  L++ YNK+  +P  IG LR L++L 
Sbjct: 205 KVGKLRNLERLNLIEN--RLTVLPKEIGQLQNLQTLNLGYNKLANIPKEIGELRSLKELD 262

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDH 214
           L  N L      V+ + L  +    S K+N++ 
Sbjct: 263 LSDNEL-----KVLPKELGTIANLQSLKLNDNR 290



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 109/234 (46%), Gaps = 56/234 (23%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLL-----ESLPKTIENCR----- 57
            RL N+  LD+  NQ   LP+ +G L  LK L++  N L     + +   + NC      
Sbjct: 322 GRLQNLQSLDLSDNQFTTLPSEVGELRNLKKLNIDSNPLLPGEKDKIQNLLPNCEIDSSY 381

Query: 58  ------------------------SLE----ELNANFNK-------LRQLP-DTIGFELI 81
                                   SLE    E   NF K       LR L    +G E+I
Sbjct: 382 AGKDDQIYYDLNIASENPLKVLNLSLEYKEYESFYNFPKKILEFRNLRGLGLYDVGLEII 441

Query: 82  --------NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLN 133
                   NL+TL +  N++  LP+ +  L +LR L    N LK+LP+++E L NL  LN
Sbjct: 442 PKEIRRLQNLETLRLGLNRLKTLPKEIGQLKNLRGLSLEANELKTLPKEIEQLQNLRGLN 501

Query: 134 ISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           + QN    +  P  IG L  L +LD+S N++TTLP  IG L+ LQ+L+L  NPL
Sbjct: 502 LHQN--RFKIFPKEIGQLRKLQKLDLSVNQLTTLPAEIGQLQNLQELNLSDNPL 553



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 86/149 (57%), Gaps = 3/149 (2%)

Query: 37  KVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVIL 96
           ++L +S   L  LP  + N  +L+ELN  FN+L  +P+ I   L  L++L +  N++  L
Sbjct: 52  QILVLSSQELTVLPWEVGNLGNLQELNLAFNELSTIPEEIK-RLQKLQSLDLYGNRLEAL 110

Query: 97  PQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVE 156
           P  +  L +L  L    N L +LP +++ L NL+ LN+S++   L  LP  IG L +L  
Sbjct: 111 PPEIGQLQNLSWLSLSKNQLATLPAEIKLLQNLQYLNLSKD--RLTILPKGIGELSNLKI 168

Query: 157 LDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L+VSYNK++  P+ IG L+ L+ L L  N
Sbjct: 169 LNVSYNKVSVFPEEIGKLQNLKDLDLSNN 197



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 25/137 (18%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP+ +  RL N+  L +  N+LK LP  IG L  L+ L +  N L++LPK IE      
Sbjct: 440 IIPKEIR-RLQNLETLRLGLNRLKTLPKEIGQLKNLRGLSLEANELKTLPKEIE------ 492

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
                             +L NL+ L+++ N+  I P+ +  L  L+ LD  +N L +LP
Sbjct: 493 ------------------QLQNLRGLNLHQNRFKIFPKEIGQLRKLQKLDLSVNQLTTLP 534

Query: 121 EDLENLINLEVLNISQN 137
            ++  L NL+ LN+S N
Sbjct: 535 AEIGQLQNLQELNLSDN 551



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 39/56 (69%)

Query: 139 QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           Q L  LP+ +G L +L EL++++N+++T+P+ I  L+KLQ L L GN L + P ++
Sbjct: 59  QELTVLPWEVGNLGNLQELNLAFNELSTIPEEIKRLQKLQSLDLYGNRLEALPPEI 114


>gi|312378183|gb|EFR24825.1| hypothetical protein AND_10342 [Anopheles darlingi]
          Length = 614

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/174 (37%), Positives = 108/174 (62%), Gaps = 3/174 (1%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           ++ N++  LP  IGCL+ LK L ++ N L SLP +++N R L+ L+   NKL ++PD I 
Sbjct: 163 LYGNKISSLPPEIGCLANLKTLALNENSLTSLPDSLQNLRHLKVLDLRHNKLSEIPDVI- 221

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
           ++L  L TL +  N+I I+  +L +L++L +L  R N +  LP  + +L+NL  L++S N
Sbjct: 222 YKLHTLTTLYLRFNRIRIVGDNLKNLSNLTMLSLRENKIHELPAAIGHLVNLTTLDLSHN 281

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
             +L+ LP +IG  ++L  LD+ +N +  +P++IG L  L +L L  N L S P
Sbjct: 282 --HLKHLPKAIGNCVNLTALDLQHNDLLDIPETIGNLSNLMRLGLRYNQLTSIP 333



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 101/182 (55%), Gaps = 3/182 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+  L ++ N L  LP+S+  L  LKVLD+  N L  +P  I    +L  L   FN++
Sbjct: 178 LANLKTLALNENSLTSLPDSLQNLRHLKVLDLRHNKLSEIPDVIYKLHTLTTLYLRFNRI 237

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           R + D +   L NL  LS+  NKI  LP ++ HL +L  LD   N LK LP+ + N +NL
Sbjct: 238 RIVGDNLK-NLSNLTMLSLRENKIHELPAAIGHLVNLTTLDLSHNHLKHLPKAIGNCVNL 296

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
             L++  N   L  +P +IG L +L+ L + YN++T++P ++     + + ++EGN +  
Sbjct: 297 TALDLQHN--DLLDIPETIGNLSNLMRLGLRYNQLTSIPATLRNCTHMDEFNVEGNGISQ 354

Query: 190 PP 191
            P
Sbjct: 355 LP 356



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 103/232 (44%), Gaps = 50/232 (21%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           +N+  LD+  N L  +P +IG LS L  L +  N L S+P T+ NC  ++E N   N + 
Sbjct: 294 VNLTALDLQHNDLLDIPETIGNLSNLMRLGLRYNQLTSIPATLRNCTHMDEFNVEGNGIS 353

Query: 71  QLPDTIGFELINLKTL----------------------SINC------------------ 90
           QLPD +   L NL T+                      SIN                   
Sbjct: 354 QLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNVTSINLEHNQIDKIQYGIFSRAKG 413

Query: 91  --------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
                   N +  LP  +   T +  L+   N L  LP+D+  L NLE+L +S N   L+
Sbjct: 414 LTKLNMKENALTSLPLDIGTWTQMVELNFGTNSLTKLPDDIHCLQNLEILILSNNL--LK 471

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            +P +IG L  L  LD+  N++ +LP  IG L  LQKL L+ N L S P  +
Sbjct: 472 RIPNTIGNLKKLRVLDLEENRLESLPSEIGLLHDLQKLILQSNQLNSLPRTI 523



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 101/194 (52%), Gaps = 25/194 (12%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +V L+  +N L  LP+ I CL  L++L +S NLL+ +P TI N + L  L+   N+L  L
Sbjct: 437 MVELNFGTNSLTKLPDDIHCLQNLEILILSNNLLKRIPNTIGNLKKLRVLDLEENRLESL 496

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P  IG  L +L+ L +  N++  LP+++ HLT+L  L    N L+ LPE++  L NLE L
Sbjct: 497 PSEIGL-LHDLQKLILQSNQLNSLPRTIGHLTNLTYLSVGENNLQFLPEEIGTLENLESL 555

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
            I+ N   ++ LPY + L                      C + L  +S+E  PL + P 
Sbjct: 556 YINDNASLIK-LPYELAL----------------------C-QNLAIMSIENCPLSALPP 591

Query: 193 DVVEQGLSAVKGYL 206
           +VV  G S V  YL
Sbjct: 592 EVVSGGPSLVIQYL 605



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 48/229 (20%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+ +L +  N++  LP +IG L  L  LD+S N L+ LPK I NC +L  L+   N L
Sbjct: 247 LSNLTMLSLRENKIHELPAAIGHLVNLTTLDLSHNHLKHLPKAIGNCVNLTALDLQHNDL 306

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLIN 128
             +P+TIG  L NL  L +  N++  +P +L + T +   +   N +  LP+  L +L N
Sbjct: 307 LDIPETIG-NLSNLMRLGLRYNQLTSIPATLRNCTHMDEFNVEGNGISQLPDGLLASLSN 365

Query: 129 LEVLNISQN----------------------------FQY------------------LE 142
           L  + +S+N                             QY                  L 
Sbjct: 366 LTTITLSRNAFHSYPSGGPAQFTNVTSINLEHNQIDKIQYGIFSRAKGLTKLNMKENALT 425

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           +LP  IG    +VEL+   N +T LPD I CL+ L+ L L  N L   P
Sbjct: 426 SLPLDIGTWTQMVELNFGTNSLTKLPDDIHCLQNLEILILSNNLLKRIP 474



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 99/180 (55%), Gaps = 3/180 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  LD+  + +  +P+S+   + L    + GN + SLP  I    +L+ L  N N L  
Sbjct: 134 NIQRLDLSKSSITVIPSSVKDCTSLVEFYLYGNKISSLPPEIGCLANLKTLALNENSLTS 193

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LPD++   L +LK L +  NK+  +P  +  L +L  L  R N ++ + ++L+NL NL +
Sbjct: 194 LPDSLQ-NLRHLKVLDLRHNKLSEIPDVIYKLHTLTTLYLRFNRIRIVGDNLKNLSNLTM 252

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L++ +N   +  LP +IG L++L  LD+S+N +  LP +IG    L  L L+ N L+  P
Sbjct: 253 LSLREN--KIHELPAAIGHLVNLTTLDLSHNHLKHLPKAIGNCVNLTALDLQHNDLLDIP 310


>gi|291234605|ref|XP_002737242.1| PREDICTED: leucine rich repeat containing 7-like [Saccoglossus
           kowalevskii]
          Length = 679

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 118/191 (61%), Gaps = 4/191 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+   L  +V L ++ N+L+ LPN IG LS L+ L +S N L SLP ++E  + ++
Sbjct: 74  VLPSSI-KDLTQLVELYLYGNRLQYLPNEIGYLSNLQKLALSENSLTSLPVSLERLKVIK 132

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKL+++P+ + + L +L TL +  N+I  + + L++LT+L +L  R N ++ LP
Sbjct: 133 VLDLRHNKLKEIPEVV-YRLTSLTTLFLRFNRISDVDEELSNLTNLTMLSLRENKIRKLP 191

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           + + NL +L   ++S N  +LE LP  IG    L  LD+ +N++  LPDS+G LR+L +L
Sbjct: 192 QGIGNLTHLITFDVSHN--HLEHLPSEIGNCEQLSSLDLQHNELLDLPDSLGNLRQLSRL 249

Query: 181 SLEGNPLVSPP 191
            L  N L + P
Sbjct: 250 GLRYNRLQAIP 260



 Score = 86.7 bits (213), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 108/206 (52%), Gaps = 27/206 (13%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           +++V L++ +NQL  LP  I  L+ L+VL +S NLL+ LP+ I N + +  L+   NKL 
Sbjct: 362 MSMVELNLGTNQLSKLPEDIQALTSLEVLILSNNLLKKLPRGIGNLQKMRVLDLEENKLE 421

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  I + L +L+ L +  N++  LP+++ HL +L+ L    N L SLPE++  L NLE
Sbjct: 422 SLPSEIAY-LCSLQRLVLQSNQLSTLPRNIGHLGTLQYLSVGENNLTSLPEEIGTLENLE 480

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L ++ N   L  LP+ + L  S                       LQ +S+E  PL   
Sbjct: 481 QLYLNDN-PNLHNLPFELALCSS-----------------------LQIMSIENCPLSQL 516

Query: 191 PMDVVEQGLSAVKGYLSEKMNNDHKS 216
           P +VV  G S V  YL  KM+  ++S
Sbjct: 517 PQEVVAGGPSLVIQYL--KMHGPYRS 540



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 103/193 (53%), Gaps = 12/193 (6%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           + L N+ +L +  N+++ LP  IG L+ L   DVS N LE LP  I NC  L  L+   N
Sbjct: 172 SNLTNLTMLSLRENKIRKLPQGIGNLTHLITFDVSHNHLEHLPSEIGNCEQLSSLDLQHN 231

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENL 126
           +L  LPD++G  L  L  L +  N++  +P+SL +   +   +   N + SLPE  L +L
Sbjct: 232 ELLDLPDSLG-NLRQLSRLGLRYNRLQAIPKSLCNCLDMEEFNVENNNISSLPEGLLSSL 290

Query: 127 INLEVLNISQ-NFQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLS 181
           +NL  L +S+ NF       Y IG      ++  +++ +N IT +P  I    K L KL+
Sbjct: 291 VNLTSLCLSRNNFN-----SYPIGGPTQFATVYSINMEHNHITKIPFGIFTRAKYLTKLN 345

Query: 182 LEGNPLVSPPMDV 194
           ++ N L + P+DV
Sbjct: 346 MKENQLTALPLDV 358



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 111/245 (45%), Gaps = 53/245 (21%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  N+L  LP+S+G L +L  L +  N L+++PK++ NC  +EE N   N +  LP+ 
Sbjct: 226 LDLQHNELLDLPDSLGNLRQLSRLGLRYNRLQAIPKSLCNCLDMEEFNVENNNISSLPEG 285

Query: 76  IGFELINLKTL----------------------SINC----------------------- 90
           +   L+NL +L                      SIN                        
Sbjct: 286 LLSSLVNLTSLCLSRNNFNSYPIGGPTQFATVYSINMEHNHITKIPFGIFTRAKYLTKLN 345

Query: 91  ---NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYS 147
              N++  LP  +    S+  L+   N L  LPED++ L +LEVL +S N   L+ LP  
Sbjct: 346 MKENQLTALPLDVGSWMSMVELNLGTNQLSKLPEDIQALTSLEVLILSNNL--LKKLPRG 403

Query: 148 IGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLS 207
           IG L  +  LD+  NK+ +LP  I  L  LQ+L L+ N L + P ++   G      YLS
Sbjct: 404 IGNLQKMRVLDLEENKLESLPSEIAYLCSLQRLVLQSNQLSTLPRNI---GHLGTLQYLS 460

Query: 208 EKMNN 212
              NN
Sbjct: 461 VGENN 465



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 32/54 (59%)

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +  LP SI  L  LVEL +  N++  LP+ IG L  LQKL+L  N L S P+ +
Sbjct: 72  ISVLPSSIKDLTQLVELYLYGNRLQYLPNEIGYLSNLQKLALSENSLTSLPVSL 125


>gi|45656981|ref|YP_001067.1| hypothetical protein LIC11097 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45600218|gb|AAS69704.1| cytoplasmic membrane protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|456983452|gb|EMG19761.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 413

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/195 (37%), Positives = 116/195 (59%), Gaps = 4/195 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +T +L N+  L +  N+L  LP  IG L  L++LD+  N L  LPK I   ++L 
Sbjct: 211 ILPKEIT-QLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLL 269

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+ + N+L  LP  I  +L NL+ L++  N+    P+ +T   +L+VLD   N L +LP
Sbjct: 270 VLDLSGNQLTILPKEIT-QLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLP 328

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E++  L NL+ L++S+N   L TLP  IG L  L  L + +N++ TLP+ I  L+ L+KL
Sbjct: 329 EEIGQLQNLQKLHLSRN--QLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKL 386

Query: 181 SLEGNPLVSPPMDVV 195
            L  NPL+S  ++ +
Sbjct: 387 YLHNNPLLSEKIERI 401



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 113/210 (53%), Gaps = 24/210 (11%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGN--LLESLPKTIENCRSLEELNAN 65
            RL N+  L +  N+L  LP  IG L  L+ L + G       LPK I   ++L+EL+  
Sbjct: 169 GRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLK 228

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
           FN+L  LP  IG +L NL+ L +  N++ ILP+ +  L +L VLD   N L  LP+++  
Sbjct: 229 FNRLTVLPKEIG-QLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 287

Query: 126 LINLEVLNIS--------------QNFQYLE-------TLPYSIGLLMSLVELDVSYNKI 164
           L NL+ LN+               QN Q L+       TLP  IG L +L +L +S N++
Sbjct: 288 LQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQL 347

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           TTLP  IG L+KL+ L L+ N L + P ++
Sbjct: 348 TTLPKEIGRLQKLESLGLDHNQLATLPEEI 377



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 108/184 (58%), Gaps = 5/184 (2%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           V +LD+  ++LK LP  IG L  L++L+   N L +LPK I   ++L+EL+   N+L  L
Sbjct: 59  VRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTL 118

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P+ IG +L NLK L +N N++  LP+ +  L +L+ L+  +N L  LP+++  L NL+ L
Sbjct: 119 PEEIG-QLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQEL 177

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDV-SYNK-ITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            +S N   L  LP  IG L SL +L +   NK  T LP  I  L+ LQ+L L+ N L   
Sbjct: 178 YLSLN--RLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVL 235

Query: 191 PMDV 194
           P ++
Sbjct: 236 PKEI 239



 Score = 94.4 bits (233), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 107/187 (57%), Gaps = 1/187 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L+  +NQL  LP  IG L  L+ L +  N L +LP+ I   ++L+ L+ N N
Sbjct: 77  GQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNN 136

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+ L++  N++ ILP+ +  L +L+ L   LN L  LPE++  L 
Sbjct: 137 QLTTLPEEIG-KLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLE 195

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  L++    +    LP  I  L +L EL + +N++T LP  IG L+ L+ L L  N L
Sbjct: 196 SLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRL 255

Query: 188 VSPPMDV 194
              P ++
Sbjct: 256 TILPKEI 262



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/165 (38%), Positives = 100/165 (60%), Gaps = 5/165 (3%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           +++++LD+S + L+ LPK I   ++L+ LN+  N+L  LP  IG +L NL+ L +  N++
Sbjct: 57  NEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIG-KLQNLQELHLQNNQL 115

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
             LP+ +  L +L+VL    N L +LPE++  L NL+ LN+  N   L  LP  IG L +
Sbjct: 116 TTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVN--RLNILPKEIGRLQN 173

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEG--NPLVSPPMDVVE 196
           L EL +S N++T LP+ IG L  L+KLSL G   P    P ++ +
Sbjct: 174 LQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQ 218


>gi|417771010|ref|ZP_12418908.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418682662|ref|ZP_13243876.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|418716202|ref|ZP_13276216.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|421116971|ref|ZP_15577343.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|400325584|gb|EJO77859.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409946978|gb|EKN96984.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|410011470|gb|EKO69589.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410787885|gb|EKR81614.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 267

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 105/178 (58%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQ   LP  IG L  L+VL+++GN L SLPK I   ++LE L+   N
Sbjct: 60  GQLQNLERLDLAGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGN 119

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP  IG +L  L+ L+++ N+  I P+ +    SL+ L    + LK+LP+++  L 
Sbjct: 120 QFTSLPKEIG-QLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQ 178

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ L++  N   L +LP  IG L +L EL++  NK+ TLP  IG L+KL+ L L  N
Sbjct: 179 NLQSLHLDGN--QLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIGQLQKLEVLRLYSN 234



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 101/183 (55%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L++  NQL  LP  IG L  L+VL+++GN   SLPK I   ++LE L+   N+   
Sbjct: 18  NLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTS 77

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ L++  N++  LP+ +  L +L  LD   N   SLP+++  L  LE 
Sbjct: 78  LPKEIG-QLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEA 136

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LN+  N       P  I    SL  L +S +++ TLP  I  L+ LQ L L+GN L S P
Sbjct: 137 LNLDHN--RFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLTSLP 194

Query: 192 MDV 194
            ++
Sbjct: 195 KEI 197



 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 110/199 (55%), Gaps = 4/199 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL++  NQ   LP  IG L  L+ LD++GN   SLPK I   ++L  LN   N
Sbjct: 37  GQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQNLRVLNLAGN 96

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +  N+   LP+ +  L  L  L+   N     P+++    
Sbjct: 97  QLTSLPKEIG-QLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQ 155

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L +S +   L+TLP  I LL +L  L +  N++T+LP  IG L+ L +L+L+ N L
Sbjct: 156 SLKWLRLSGD--QLKTLPKEILLLQNLQSLHLDGNQLTSLPKEIGQLQNLFELNLQDNKL 213

Query: 188 VSPPMDVVE-QGLSAVKGY 205
            + P ++ + Q L  ++ Y
Sbjct: 214 KTLPKEIGQLQKLEVLRLY 232



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/152 (40%), Positives = 93/152 (61%), Gaps = 3/152 (1%)

Query: 46  LESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTS 105
           LESLP+ I   ++LE+LN + N+L  LP  IG +L NL+ L++  N+   LP+ +  L +
Sbjct: 6   LESLPRVIGLFQNLEKLNLDGNQLTSLPKEIG-QLQNLRVLNLAGNQFTSLPKEIGQLQN 64

Query: 106 LRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
           L  LD   N   SLP+++  L NL VLN++ N   L +LP  IG L +L  LD++ N+ T
Sbjct: 65  LERLDLAGNQFTSLPKEIGQLQNLRVLNLAGN--QLTSLPKEIGQLQNLERLDLAGNQFT 122

Query: 166 TLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQ 197
           +LP  IG L+KL+ L+L+ N     P ++ +Q
Sbjct: 123 SLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQ 154



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 2/82 (2%)

Query: 113 LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
           L+ L+SLP  +    NLE LN+  N   L +LP  IG L +L  L+++ N+ T+LP  IG
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGN--QLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60

Query: 173 CLRKLQKLSLEGNPLVSPPMDV 194
            L+ L++L L GN   S P ++
Sbjct: 61  QLQNLERLDLAGNQFTSLPKEI 82


>gi|359728058|ref|ZP_09266754.1| hypothetical protein Lwei2_14512 [Leptospira weilii str.
           2006001855]
          Length = 331

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/196 (36%), Positives = 114/196 (58%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +  +L N+  L +  N L  LP  IG L  L+ L +  N LE+LP  I    +L+
Sbjct: 103 VLPDEI-GQLQNLKELFLFYNYLSYLPKLIGNLKALQELHIDNNKLEALPNEIGKLNNLQ 161

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +   + N+L++LP  IG  L NL+ L++N N+   LP+ +  L++L+ L    N L +LP
Sbjct: 162 KFGLSHNRLKELPKEIG-RLQNLEELNLNSNQFSSLPKEIGQLSNLKNLHLDHNMLANLP 220

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++  L  LE L + +N   LETLP  IG L +L ELD+SYN ++++P  IG L+ L+ L
Sbjct: 221 KEIGQLSRLETLTLFRN--SLETLPEEIGQLWNLRELDLSYNPLSSIPKEIGQLKNLRIL 278

Query: 181 SLEGNPLVSPPMDVVE 196
            L   PL   P ++ E
Sbjct: 279 HLRKTPLARLPDEIGE 294



 Score = 97.1 bits (240), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 66/167 (39%), Positives = 98/167 (58%), Gaps = 3/167 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L + +N+L+ LPN IG L+ L+   +S N L+ LPK I   ++LEELN N N+   LP  
Sbjct: 140 LHIDNNKLEALPNEIGKLNNLQKFGLSHNRLKELPKEIGRLQNLEELNLNSNQFSSLPKE 199

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NLK L ++ N +  LP+ +  L+ L  L    N L++LPE++  L NL  L++S
Sbjct: 200 IG-QLSNLKNLHLDHNMLANLPKEIGQLSRLETLTLFRNSLETLPEEIGQLWNLRELDLS 258

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
            N   L ++P  IG L +L  L +    +  LPD IG L+ L++L L
Sbjct: 259 YN--PLSSIPKEIGQLKNLRILHLRKTPLARLPDEIGELQDLEELIL 303



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/180 (34%), Positives = 100/180 (55%), Gaps = 3/180 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           VLD+   +L+ L   I     L+   ++GN + +LP+ I     L+ L    N+L  LPD
Sbjct: 47  VLDLQYQRLEKLSKEIVLFKNLEWFQLTGNQITTLPREIGTLTRLKGLYLAENQLTVLPD 106

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            IG +L NLK L +  N +  LP+ + +L +L+ L    N L++LP ++  L NL+   +
Sbjct: 107 EIG-QLQNLKELFLFYNYLSYLPKLIGNLKALQELHIDNNKLEALPNEIGKLNNLQKFGL 165

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           S N   L+ LP  IG L +L EL+++ N+ ++LP  IG L  L+ L L+ N L + P ++
Sbjct: 166 SHN--RLKELPKEIGRLQNLEELNLNSNQFSSLPKEIGQLSNLKNLHLDHNMLANLPKEI 223



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 71/125 (56%), Gaps = 1/125 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  L+++SNQ   LP  IG LS LK L +  N+L +LPK I     LE L    N
Sbjct: 178 GRLQNLEELNLNSNQFSSLPKEIGQLSNLKNLHLDHNMLANLPKEIGQLSRLETLTLFRN 237

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP+ IG +L NL+ L ++ N +  +P+ +  L +LR+L  R   L  LP+++  L 
Sbjct: 238 SLETLPEEIG-QLWNLRELDLSYNPLSSIPKEIGQLKNLRILHLRKTPLARLPDEIGELQ 296

Query: 128 NLEVL 132
           +LE L
Sbjct: 297 DLEEL 301



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 83/150 (55%), Gaps = 3/150 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+    +  N+LK LP  IG L  L+ L+++ N   SLPK I    +L+ L+ + N
Sbjct: 155 GKLNNLQKFGLSHNRLKELPKEIGRLQNLEELNLNSNQFSSLPKEIGQLSNLKNLHLDHN 214

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP  IG +L  L+TL++  N +  LP+ +  L +LR LD   N L S+P+++  L 
Sbjct: 215 MLANLPKEIG-QLSRLETLTLFRNSLETLPEEIGQLWNLRELDLSYNPLSSIPKEIGQLK 273

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVEL 157
           NL +L++ +    L  LP  IG L  L EL
Sbjct: 274 NLRILHLRKT--PLARLPDEIGELQDLEEL 301


>gi|322510775|gb|ADX06089.1| putative leucine-rich repeat ribonuclease inhibitor family protein
           [Organic Lake phycodnavirus 1]
          Length = 598

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 112/193 (58%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+S+   L+++  LD+ +N+L  LP+SIG L  L+ LD+  N L  LP++I N   LE 
Sbjct: 60  LPDSI-GNLIHLQQLDIRNNELGQLPDSIGNLIHLQQLDIEDNWLNQLPESIGNLIELEI 118

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN N N+L  LP+ IG  +  +++L I  N++ +LP S+  L +L  L    N L  +PE
Sbjct: 119 LNVNLNRLTLLPENIG-NIKKMRSLYIESNELTLLPVSIGGLQNLEQLFTSSNRLSQIPE 177

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + NL NL++L+I  N   L  LP  IG L  L +LD+  N+++ LP+SI  L  LQ L 
Sbjct: 178 SICNLTNLQMLDIKDN--ELTQLPKHIGKLRKLKKLDIGNNELSELPESITNLTHLQMLD 235

Query: 182 LEGNPLVSPPMDV 194
           +  N L   P  +
Sbjct: 236 IGYNELSELPESI 248



 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/186 (38%), Positives = 109/186 (58%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
            L NV+  ++ +N+L  +P+SIG L  L+ LD+  N L  LP +I N   L++L+   N+
Sbjct: 20  ELQNVISFNLANNELSTIPDSIGNLIHLQQLDIRNNELGQLPDSIGNLIHLQQLDIRNNE 79

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L QLPD+IG  LI+L+ L I  N +  LP+S+ +L  L +L+  LN L  LPE++ N+  
Sbjct: 80  LGQLPDSIG-NLIHLQQLDIEDNWLNQLPESIGNLIELEILNVNLNRLTLLPENIGNIKK 138

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           +  L I  N   L  LP SIG L +L +L  S N+++ +P+SI  L  LQ L ++ N L 
Sbjct: 139 MRSLYIESN--ELTLLPVSIGGLQNLEQLFTSSNRLSQIPESICNLTNLQMLDIKDNELT 196

Query: 189 SPPMDV 194
             P  +
Sbjct: 197 QLPKHI 202



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/171 (41%), Positives = 102/171 (59%), Gaps = 3/171 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+ +N+L  LP SI  L+ L++LD+  N L  LP++I N  +L+EL    N+L QLP++
Sbjct: 211 LDIGNNELSELPESITNLTHLQMLDIGYNELSELPESISNLTNLQELYIENNQLTQLPES 270

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           I   L NL+ L I+ N++  LP  + +LT L++L    N L  LPE + NL NL+ L I 
Sbjct: 271 IT-NLTNLRMLYIHNNQLSQLPLRIGNLTHLQILAIANNKLSELPERISNLTNLQKLYIQ 329

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
            N   L  LP  IG L +L  LD+  N++T +P+SI  L  L+ L L  NP
Sbjct: 330 NN--QLTRLPLRIGNLTNLKVLDIKNNQLTQIPESISNLTNLETLVLTNNP 378



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 112/194 (57%), Gaps = 4/194 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+   L N+  L   SN+L  +P SI  L+ L++LD+  N L  LPK I   R L+
Sbjct: 151 LLPVSIGG-LQNLEQLFTSSNRLSQIPESICNLTNLQMLDIKDNELTQLPKHIGKLRKLK 209

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L+   N+L +LP++I   L +L+ L I  N++  LP+S+++LT+L+ L    N L  LP
Sbjct: 210 KLDIGNNELSELPESIT-NLTHLQMLDIGYNELSELPESISNLTNLQELYIENNQLTQLP 268

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E + NL NL +L I  N   L  LP  IG L  L  L ++ NK++ LP+ I  L  LQKL
Sbjct: 269 ESITNLTNLRMLYIHNN--QLSQLPLRIGNLTHLQILAIANNKLSELPERISNLTNLQKL 326

Query: 181 SLEGNPLVSPPMDV 194
            ++ N L   P+ +
Sbjct: 327 YIQNNQLTRLPLRI 340



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/136 (40%), Positives = 80/136 (58%), Gaps = 2/136 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+ + L N+  L + +NQL  LP SI  L+ L++L +  N L  LP  I N   L+ 
Sbjct: 244 LPESI-SNLTNLQELYIENNQLTQLPESITNLTNLRMLYIHNNQLSQLPLRIGNLTHLQI 302

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    NKL +LP+ I   L NL+ L I  N++  LP  + +LT+L+VLD + N L  +PE
Sbjct: 303 LAIANNKLSELPERIS-NLTNLQKLYIQNNQLTRLPLRIGNLTNLKVLDIKNNQLTQIPE 361

Query: 122 DLENLINLEVLNISQN 137
            + NL NLE L ++ N
Sbjct: 362 SISNLTNLETLVLTNN 377



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 33/163 (20%)

Query: 53  IENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDAR 112
           IE+ + L++L   FNK  +L + I F L N        N++  +P S+ +L  L+ LD R
Sbjct: 6   IEDLKKLDDLE--FNK--ELQNVISFNLAN--------NELSTIPDSIGNLIHLQQLDIR 53

Query: 113 LNCLKSLPEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLL 151
            N L  LP+ + NLI+L+ L+I  N                       +L  LP SIG L
Sbjct: 54  NNELGQLPDSIGNLIHLQQLDIRNNELGQLPDSIGNLIHLQQLDIEDNWLNQLPESIGNL 113

Query: 152 MSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           + L  L+V+ N++T LP++IG ++K++ L +E N L   P+ +
Sbjct: 114 IELEILNVNLNRLTLLPENIGNIKKMRSLYIESNELTLLPVSI 156



 Score = 43.9 bits (102), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 3/96 (3%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE + + L N+  L + +NQL  LP  IG L+ LKVLD+  N L  +P++I N  +LE 
Sbjct: 313 LPERI-SNLTNLQKLYIQNNQLTRLPLRIGNLTNLKVLDIKNNQLTQIPESISNLTNLET 371

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILP 97
           L    N    +PD      +N++ +  + N + + P
Sbjct: 372 LVLTNNPNLFIPD--WLRQMNIRFIHYDVNNVDVNP 405


>gi|418726507|ref|ZP_13285118.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960417|gb|EKO24171.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 595

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/184 (38%), Positives = 109/184 (59%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++   +L  LP  IG L  L+ L++  NLL  LPK IE   +L+EL+   N+L 
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIEQLENLQELDLRDNQLA 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
             P  I  EL  L++L ++ N+++ILP  +  L +L+ L    N L + P+++  L NL+
Sbjct: 108 TFPAVI-VELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +S+N   L  LP  IG L +L  LD+  N+ TTLP  IG L+ LQ L+L+ N L + 
Sbjct: 167 KLWLSEN--RLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATL 224

Query: 191 PMDV 194
           P+++
Sbjct: 225 PVEI 228



 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 104/186 (55%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  LD+  NQL   P  I  L KL+ LD+S N L  LP  I   ++L++L    NK
Sbjct: 92  QLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNK 151

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L   P  IG +L NL+ L ++ N++  LP+ +  L +L+ LD + N   +LP+++  L N
Sbjct: 152 LTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQN 210

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ LN+  N   L TLP  IG L +L EL +  N++T  P  IG L+ LQ L    N L 
Sbjct: 211 LQTLNLQDN--QLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLT 268

Query: 189 SPPMDV 194
           + P ++
Sbjct: 269 ALPKEM 274



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 101/183 (55%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L+++      LP  I  L  LK L +  N L+++P  I   ++LE LN   N+L +
Sbjct: 377 NLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELER 436

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ LS++ N + I P  +  L  L+ LD  +N   +  +++  L NL+ 
Sbjct: 437 LPKEIG-QLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFLKEIGKLENLQT 495

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LN+ +N   L  L   IG L +L ELD++ N+ T LP  IG L+KLQ L L  N L + P
Sbjct: 496 LNLQRN--QLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP 553

Query: 192 MDV 194
            ++
Sbjct: 554 TEI 556



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 99/179 (55%), Gaps = 3/179 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  L ++ N+L   P  IG L  L+ L +S N L +LPK I   ++L+ L+   N
Sbjct: 137 GRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDN 196

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP  IG +L NL+TL++  N++  LP  +  L +L+ L  R N L   P+++  L 
Sbjct: 197 QFTTLPKEIG-QLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQ 255

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           NL++L   +N   L  LP  +G L +L  L++  N++T  P  IG L+ LQ L L  NP
Sbjct: 256 NLQMLCSPEN--RLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNP 312



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/180 (35%), Positives = 101/180 (56%), Gaps = 3/180 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +RL N+  L +  N LK +P+ IG L  L+ L++  N LE LPK I   R+L++L+ + N
Sbjct: 396 SRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQN 455

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+  P  I  +L  L+ L ++ N+     + +  L +L+ L+ + N L +L  ++  L 
Sbjct: 456 TLKIFPAEIE-QLKKLQKLDLSVNQFTTFLKEIGKLENLQTLNLQRNQLTNLTAEIGQLQ 514

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L+++ N      LP  IG L  L  LD+  N++TTLP  IG L+ LQ L L+ N L
Sbjct: 515 NLQELDLNDN--QFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQL 572



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 96/173 (55%), Gaps = 8/173 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  N+L  LP  IG L  L+ LD+  N   +LPK I   ++L+ LN   N
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDN 219

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +  N++ + P+ +  L +L++L +  N L +LP+++  L 
Sbjct: 220 QLATLPVEIG-QLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQ 278

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           NL+ LN+  N   L   P  IG L +L +L++  N     P S+   +++QKL
Sbjct: 279 NLQTLNLVNN--RLTVFPKEIGQLQNLQDLELLMN-----PFSLKERKRIQKL 324



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 100/233 (42%), Gaps = 53/233 (22%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L    N+L  LP  +G L  L+ L++  N L   PK I   ++L++L    N
Sbjct: 252 GQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMN 311

Query: 68  -------------------KLRQLPDTIGFELINL---------------KTLSINCNKI 93
                               LR++ +   +  +NL               K  S +  K+
Sbjct: 312 PFSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKV 371

Query: 94  VI-----------------LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQ 136
           ++                 LP+ ++ L +L+ L   LN LK++P ++  L NLE LN+  
Sbjct: 372 ILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEA 431

Query: 137 NFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           N   LE LP  IG L +L +L +  N +   P  I  L+KLQKL L  N   +
Sbjct: 432 N--ELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTT 482



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 2/80 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L + L+N +++ VLN+S   + L  LP  IG L +L EL++ +N +T LP  I  L  
Sbjct: 38  RDLTKALQNPLDVRVLNLS--GEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIEQLEN 95

Query: 177 LQKLSLEGNPLVSPPMDVVE 196
           LQ+L L  N L + P  +VE
Sbjct: 96  LQELDLRDNQLATFPAVIVE 115



 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 1/92 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  NQL  L   IG L  L+ LD++ N    LPK I   + L+ L+   N
Sbjct: 488 GKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNN 547

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQS 99
           +L  LP  IG +L NL+ L +  N++ +  Q 
Sbjct: 548 QLTTLPTEIG-QLQNLQWLYLQNNQLSLKEQE 578


>gi|456822602|gb|EMF71072.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 237

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 107/178 (60%), Gaps = 3/178 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V  LD+ +N+L  LP  IG L +L+ L +S N L++LPK IE  + L  L  + N+L  
Sbjct: 41  DVQTLDLSNNKLITLPKEIGQLKELEWLSLSKNQLKTLPKEIEQLQKLRYLYLSDNQLTT 100

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG+ L  L+ L ++ N++  LP+ +  L  L+VLD   N L +LP ++E L  L+ 
Sbjct: 101 LPKEIGY-LKELQELDLSRNQLTTLPKEIGQLKELQVLDLSNNQLTTLPNEIEFLKRLQE 159

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           L +  N   L TLP  IG L  L +LD+S N++TTLP  I  L+KL++L L+  P++ 
Sbjct: 160 LYLRNN--QLTTLPKGIGYLKKLQKLDLSRNQLTTLPKEIETLKKLEELFLDDIPVLK 215



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/113 (41%), Positives = 69/113 (61%), Gaps = 2/113 (1%)

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           +++TL ++ NK++ LP+ +  L  L  L    N LK+LP+++E L  L  L +S N   L
Sbjct: 41  DVQTLDLSNNKLITLPKEIGQLKELEWLSLSKNQLKTLPKEIEQLQKLRYLYLSDN--QL 98

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            TLP  IG L  L ELD+S N++TTLP  IG L++LQ L L  N L + P ++
Sbjct: 99  TTLPKEIGYLKELQELDLSRNQLTTLPKEIGQLKELQVLDLSNNQLTTLPNEI 151


>gi|421087062|ref|ZP_15547903.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421104771|ref|ZP_15565364.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410365081|gb|EKP20476.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410430171|gb|EKP74541.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 405

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/195 (37%), Positives = 116/195 (59%), Gaps = 4/195 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +T +L N+  L +  N+L  LP  IG L  L++LD+  N L  LPK I   ++L 
Sbjct: 203 ILPKEIT-QLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLL 261

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+ + N+L  LP  I  +L NL+ L++  N+    P+ +T   +L+VLD   N L +LP
Sbjct: 262 VLDLSGNQLTILPKEIT-QLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLP 320

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E++  L NL+ L++S+N   L TLP  IG L  L  L + +N++ TLP+ I  L+ L+KL
Sbjct: 321 EEIGQLQNLQKLHLSRN--QLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKL 378

Query: 181 SLEGNPLVSPPMDVV 195
            L  NPL+S  ++ +
Sbjct: 379 YLHNNPLLSEKIERI 393



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 113/210 (53%), Gaps = 24/210 (11%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGN--LLESLPKTIENCRSLEELNAN 65
            RL N+  L +  N+L  LP  IG L  L+ L + G       LPK I   ++L+EL+  
Sbjct: 161 GRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLK 220

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
           FN+L  LP  IG +L NL+ L +  N++ ILP+ +  L +L VLD   N L  LP+++  
Sbjct: 221 FNRLTVLPKEIG-QLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 279

Query: 126 LINLEVLNIS--------------QNFQYLE-------TLPYSIGLLMSLVELDVSYNKI 164
           L NL+ LN+               QN Q L+       TLP  IG L +L +L +S N++
Sbjct: 280 LQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQL 339

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           TTLP  IG L+KL+ L L+ N L + P ++
Sbjct: 340 TTLPKEIGRLQKLESLGLDHNQLATLPEEI 369



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 108/184 (58%), Gaps = 5/184 (2%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           V +LD+  ++LK LP  IG L  L++L+   N L +LPK I   ++L+EL+   N+L  L
Sbjct: 51  VRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTL 110

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P+ IG +L NLK L +N N++  LP+ +  L +L+ L+  +N L  LP+++  L NL+ L
Sbjct: 111 PEEIG-QLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQEL 169

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDV-SYNK-ITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            +S N   L  LP  IG L SL +L +   NK  T LP  I  L+ LQ+L L+ N L   
Sbjct: 170 YLSLN--RLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVL 227

Query: 191 PMDV 194
           P ++
Sbjct: 228 PKEI 231



 Score = 94.4 bits (233), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 107/187 (57%), Gaps = 1/187 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L+  +NQL  LP  IG L  L+ L +  N L +LP+ I   ++L+ L+ N N
Sbjct: 69  GQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNN 128

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+ L++  N++ ILP+ +  L +L+ L   LN L  LPE++  L 
Sbjct: 129 QLTTLPEEIG-KLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLE 187

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  L++    +    LP  I  L +L EL + +N++T LP  IG L+ L+ L L  N L
Sbjct: 188 SLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRL 247

Query: 188 VSPPMDV 194
              P ++
Sbjct: 248 TILPKEI 254



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/165 (38%), Positives = 100/165 (60%), Gaps = 5/165 (3%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           +++++LD+S + L+ LPK I   ++L+ LN+  N+L  LP  IG +L NL+ L +  N++
Sbjct: 49  NEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIG-KLQNLQELHLQNNQL 107

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
             LP+ +  L +L+VL    N L +LPE++  L NL+ LN+  N   L  LP  IG L +
Sbjct: 108 TTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVN--RLNILPKEIGRLQN 165

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEG--NPLVSPPMDVVE 196
           L EL +S N++T LP+ IG L  L+KLSL G   P    P ++ +
Sbjct: 166 LQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQ 210


>gi|359728061|ref|ZP_09266757.1| hypothetical protein Lwei2_14527 [Leptospira weilii str.
           2006001855]
          Length = 289

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 112/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L++ SN+L  LP  +  L KL+ LD+  N L +LPK I   +SL+ L    N
Sbjct: 68  GELQNLQTLNLDSNELTALPKEMRQLQKLQKLDLRENQLTTLPKEIGQLKSLQTLYLLAN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+TL ++ N++ ILP+ +  L +L+ L+   N L +LP ++  L 
Sbjct: 128 QLTVLPNEIG-QLQNLQTLYLSQNQLTILPKEIAKLQNLQTLNLNGNQLTTLPSEIGQLQ 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++  N   L  LP  I  L +L  LD+S+N++T LP  I  L+ LQ+L+L GN L
Sbjct: 187 NLQRLDLFHN--KLTVLPKEILQLQNLQRLDLSHNQLTILPKEIAKLQNLQELNLNGNRL 244

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 245 TTLPSEI 251



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 107/186 (57%), Gaps = 3/186 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V VL++   +L  LP  IG L  L+ L++  N L +LPK +   + L++L+   N+L 
Sbjct: 48  LKVRVLNLSFQKLSTLPKEIGELQNLQTLNLDSNELTALPKEMRQLQKLQKLDLRENQLT 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG +L +L+TL +  N++ +LP  +  L +L+ L    N L  LP+++  L NL+
Sbjct: 108 TLPKEIG-QLKSLQTLYLLANQLTVLPNEIGQLQNLQTLYLSQNQLTILPKEIAKLQNLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN++ N   L TLP  IG L +L  LD+ +NK+T LP  I  L+ LQ+L L  N L   
Sbjct: 167 TLNLNGN--QLTTLPSEIGQLQNLQRLDLFHNKLTVLPKEILQLQNLQRLDLSHNQLTIL 224

Query: 191 PMDVVE 196
           P ++ +
Sbjct: 225 PKEIAK 230



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/174 (39%), Positives = 99/174 (56%), Gaps = 3/174 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  NQL  LP  IG L  L+ L +  N L  LP  I   ++L+ L  + N+L  LP  
Sbjct: 99  LDLRENQLTTLPKEIGQLKSLQTLYLLANQLTVLPNEIGQLQNLQTLYLSQNQLTILPKE 158

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           I  +L NL+TL++N N++  LP  +  L +L+ LD   N L  LP+++  L NL+ L++S
Sbjct: 159 IA-KLQNLQTLNLNGNQLTTLPSEIGQLQNLQRLDLFHNKLTVLPKEILQLQNLQRLDLS 217

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
            N   L  LP  I  L +L EL+++ N++TTLP  I  L+KL+ L L  N   S
Sbjct: 218 HN--QLTILPKEIAKLQNLQELNLNGNRLTTLPSEIEFLKKLKILRLYQNEFSS 269



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 62/102 (60%), Gaps = 1/102 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A+L N+  L+++ NQL  LP+ IG L  L+ LD+  N L  LPK I   ++L+ L+ + N
Sbjct: 160 AKLQNLQTLNLNGNQLTTLPSEIGQLQNLQRLDLFHNKLTVLPKEILQLQNLQRLDLSHN 219

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           +L  LP  I  +L NL+ L++N N++  LP  +  L  L++L
Sbjct: 220 QLTILPKEIA-KLQNLQELNLNGNRLTTLPSEIEFLKKLKIL 260



 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 5/114 (4%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVL+     L +LP+++  L NL+ LN+  N   L  LP  +  L  L 
Sbjct: 40  LTKALQNPLKVRVLNLSFQKLSTLPKEIGELQNLQTLNLDSN--ELTALPKEMRQLQKLQ 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGLSAVKGYLSE 208
           +LD+  N++TTLP  IG L+ LQ L L  N L   P ++ + Q L  +  YLS+
Sbjct: 98  KLDLRENQLTTLPKEIGQLKSLQTLYLLANQLTVLPNEIGQLQNLQTL--YLSQ 149



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 2/77 (2%)

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
            L + L+N + + VLN+S  FQ L TLP  IG L +L  L++  N++T LP  +  L+KL
Sbjct: 39  DLTKALQNPLKVRVLNLS--FQKLSTLPKEIGELQNLQTLNLDSNELTALPKEMRQLQKL 96

Query: 178 QKLSLEGNPLVSPPMDV 194
           QKL L  N L + P ++
Sbjct: 97  QKLDLRENQLTTLPKEI 113



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 1/86 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  N+L  LP  I  L  L+ LD+S N L  LPK I   ++L+ELN N N
Sbjct: 183 GQLQNLQRLDLFHNKLTVLPKEILQLQNLQRLDLSHNQLTILPKEIAKLQNLQELNLNGN 242

Query: 68  KLRQLPDTIGFELINLKTLSINCNKI 93
           +L  LP  I F L  LK L +  N+ 
Sbjct: 243 RLTTLPSEIEF-LKKLKILRLYQNEF 267


>gi|418691224|ref|ZP_13252327.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400359628|gb|EJP15613.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 267

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 104/178 (58%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQ   LP  IG L  L+VL+++GN L SLPK I   ++LE L+   N
Sbjct: 60  GQLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGN 119

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP  IG +L  L+ L+++ N+  I P+ +    SL+ L    + LK+LP+++  L 
Sbjct: 120 QFTSLPKEIG-QLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQ 178

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ L++  N   L +LP  IG L +L EL++  NK+ TLP  IG L+ LQ L L  N
Sbjct: 179 NLQSLHLDSN--QLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIGQLQNLQVLRLYSN 234



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 116/216 (53%), Gaps = 23/216 (10%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L++  NQL  LP  IG L KL+VL+++GN   SLPK I   ++LE L+ + N+   
Sbjct: 18  NLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTS 77

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ L++  N++  LP+ +  L +L  LD   N   SLP+++  L  LE 
Sbjct: 78  LPKEIG-QLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEA 136

Query: 132 LNISQN---------------------FQYLETLPYSIGLLMSLVELDVSYNKITTLPDS 170
           LN+  N                        L+TLP  I LL +L  L +  N++T+LP  
Sbjct: 137 LNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLTSLPKE 196

Query: 171 IGCLRKLQKLSLEGNPLVSPPMDVVE-QGLSAVKGY 205
           IG L+ L +L+L+ N L + P ++ + Q L  ++ Y
Sbjct: 197 IGQLQNLFELNLQDNKLKTLPKEIGQLQNLQVLRLY 232



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 98/175 (56%), Gaps = 3/175 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           ++L+ LP  IG    L+ L++ GN L SLPK I   + L  LN   N+   LP  IG +L
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIG-QL 62

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            NL+ L ++ N+   LP+ +  L +LRVL+   N L SLP+++  L NLE L+++ N   
Sbjct: 63  QNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGN--Q 120

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
             +LP  IG L  L  L++ +N+ T  P  I   + L+ L L G+ L + P +++
Sbjct: 121 FTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEIL 175



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 2/82 (2%)

Query: 113 LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
           L+ L+SLP  +    NLE LN+  N   L +LP  IG L  L  L+++ N+ T+LP  IG
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGN--QLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIG 60

Query: 173 CLRKLQKLSLEGNPLVSPPMDV 194
            L+ L++L L+GN   S P ++
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEI 82


>gi|347971997|ref|XP_313783.5| AGAP004485-PA [Anopheles gambiae str. PEST]
 gi|333469123|gb|EAA44595.5| AGAP004485-PA [Anopheles gambiae str. PEST]
          Length = 595

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 109/177 (61%), Gaps = 3/177 (1%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           ++ N++  LP  IGCL+ LK L ++ N L SLP +++N + L+ L+   NKL  +PD I 
Sbjct: 144 LYGNKISSLPPEIGCLANLKTLALNENSLTSLPDSLQNLKQLKVLDLRHNKLSDIPDVI- 202

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
           ++L  L TL +  N+I ++  +L +L+SL +L  R N +  LP  + +L+NL  L++S N
Sbjct: 203 YKLHTLTTLYLRFNRIRVVGDNLKNLSSLTMLSLRENKIHELPAAIGHLVNLTTLDLSHN 262

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +L+ LP +IG  ++L  LD+ +N +  +P+SIG L  L +L L  N L S P+ +
Sbjct: 263 --HLKHLPEAIGNCVNLTALDLQHNDLLDIPESIGNLSNLMRLGLRYNQLTSIPVSL 317



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/182 (36%), Positives = 102/182 (56%), Gaps = 3/182 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+  L ++ N L  LP+S+  L +LKVLD+  N L  +P  I    +L  L   FN++
Sbjct: 159 LANLKTLALNENSLTSLPDSLQNLKQLKVLDLRHNKLSDIPDVIYKLHTLTTLYLRFNRI 218

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           R + D +   L +L  LS+  NKI  LP ++ HL +L  LD   N LK LPE + N +NL
Sbjct: 219 RVVGDNLK-NLSSLTMLSLRENKIHELPAAIGHLVNLTTLDLSHNHLKHLPEAIGNCVNL 277

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
             L++  N   L  +P SIG L +L+ L + YN++T++P S+     + + ++EGN +  
Sbjct: 278 TALDLQHN--DLLDIPESIGNLSNLMRLGLRYNQLTSIPVSLKNCTHMDEFNVEGNGISQ 335

Query: 190 PP 191
            P
Sbjct: 336 LP 337



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 101/194 (52%), Gaps = 25/194 (12%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +V L+  +N L  LP+ I CL  L++L +S NLL+ +P TI N + L  L+   N+L  L
Sbjct: 418 MVELNFGTNSLTKLPDDIHCLQNLEILILSNNLLKRIPNTIGNLKKLRVLDLEENRLESL 477

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P  IG  L +L+ L +  N++  LP+++ HLT+L  L    N L+ LPE++  L NLE L
Sbjct: 478 PSEIGL-LHDLQKLILQSNQLSALPRTIGHLTNLTYLSVGENNLQFLPEEIGTLENLESL 536

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
            I+ N   ++ LPY + L                      C + L  +S+E  PL + P 
Sbjct: 537 YINDNPSLIK-LPYELAL----------------------C-QNLAIMSIENCPLSALPP 572

Query: 193 DVVEQGLSAVKGYL 206
           +VV  G S V  YL
Sbjct: 573 EVVSGGPSLVIQYL 586



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 109/241 (45%), Gaps = 51/241 (21%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE++    +N+  LD+  N L  +P SIG LS L  L +  N L S+P +++NC  ++E
Sbjct: 267 LPEAI-GNCVNLTALDLQHNDLLDIPESIGNLSNLMRLGLRYNQLTSIPVSLKNCTHMDE 325

Query: 62  LNANFNKLRQLPDTIGFELINLKTL----------------------SINC--------- 90
            N   N + QLPD +   L NL T+                      SIN          
Sbjct: 326 FNVEGNGISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNVTSINLEHNQIDKIQ 385

Query: 91  -----------------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLN 133
                            N +  LP  +   T +  L+   N L  LP+D+  L NLE+L 
Sbjct: 386 YGIFSRAKGLTKLNMKENALTSLPLDIGTWTQMVELNFGTNSLTKLPDDIHCLQNLEILI 445

Query: 134 ISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMD 193
           +S N   L+ +P +IG L  L  LD+  N++ +LP  IG L  LQKL L+ N L + P  
Sbjct: 446 LSNNL--LKRIPNTIGNLKKLRVLDLEENRLESLPSEIGLLHDLQKLILQSNQLSALPRT 503

Query: 194 V 194
           +
Sbjct: 504 I 504



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/185 (35%), Positives = 96/185 (51%), Gaps = 4/185 (2%)

Query: 3   PESLTARLLNVVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEE 61
           P    A+  NV  +++  NQ+  +   I   +K L  L++  N L SLP  I     + E
Sbjct: 361 PSGGPAQFTNVTSINLEHNQIDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGTWTQMVE 420

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N L +LPD I   L NL+ L ++ N +  +P ++ +L  LRVLD   N L+SLP 
Sbjct: 421 LNFGTNSLTKLPDDIHC-LQNLEILILSNNLLKRIPNTIGNLKKLRVLDLEENRLESLPS 479

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L+ L +  N   L  LP +IG L +L  L V  N +  LP+ IG L  L+ L 
Sbjct: 480 EIGLLHDLQKLILQSN--QLSALPRTIGHLTNLTYLSVGENNLQFLPEEIGTLENLESLY 537

Query: 182 LEGNP 186
           +  NP
Sbjct: 538 INDNP 542



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 100/226 (44%), Gaps = 48/226 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           + +L +  N++  LP +IG L  L  LD+S N L+ LP+ I NC +L  L+   N L  +
Sbjct: 231 LTMLSLRENKIHELPAAIGHLVNLTTLDLSHNHLKHLPEAIGNCVNLTALDLQHNDLLDI 290

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEV 131
           P++IG  L NL  L +  N++  +P SL + T +   +   N +  LP+  L +L NL  
Sbjct: 291 PESIG-NLSNLMRLGLRYNQLTSIPVSLKNCTHMDEFNVEGNGISQLPDGLLASLSNLTT 349

Query: 132 LNISQN----------------------------FQY------------------LETLP 145
           + +S+N                             QY                  L +LP
Sbjct: 350 ITLSRNAFHSYPSGGPAQFTNVTSINLEHNQIDKIQYGIFSRAKGLTKLNMKENALTSLP 409

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
             IG    +VEL+   N +T LPD I CL+ L+ L L  N L   P
Sbjct: 410 LDIGTWTQMVELNFGTNSLTKLPDDIHCLQNLEILILSNNLLKRIP 455



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 2/64 (3%)

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           N++ L++S++   +  +P S+    SLVE  +  NKI++LP  IGCL  L+ L+L  N L
Sbjct: 115 NIQRLDLSKS--SITVIPASVKDCTSLVEFYLYGNKISSLPPEIGCLANLKTLALNENSL 172

Query: 188 VSPP 191
            S P
Sbjct: 173 TSLP 176


>gi|195381915|ref|XP_002049678.1| GJ21726 [Drosophila virilis]
 gi|194144475|gb|EDW60871.1| GJ21726 [Drosophila virilis]
          Length = 861

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/177 (38%), Positives = 112/177 (63%), Gaps = 3/177 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +L V+SN L+ +P +IG L +L+ LD++ NL+ ++P+ I+ C+ L  L+ + N L++LPD
Sbjct: 68  ILQVNSNNLESIPQAIGSLRQLQHLDLNRNLIVNVPEEIKACKHLTHLDLSCNSLQRLPD 127

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            I   LI+L+ L +N   +  LP +   L +LR+L+ RLN L +LP+ +  L++L+ L+I
Sbjct: 128 AIT-SLISLQELLLNETYLEFLPANFGRLVNLRILEVRLNNLITLPKSMVRLVSLQRLDI 186

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
             N ++ E LP  +G L SL EL + +N+I  +  +IG LR+LQ     GN L + P
Sbjct: 187 GGN-EFTE-LPEVVGELKSLRELWIDFNQIRRVAPNIGKLRELQHFEANGNLLDTLP 241



 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 115/193 (59%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+++T+ L+++  L ++   L+ LP + G L  L++L+V  N L +LPK++    SL+ 
Sbjct: 125 LPDAITS-LISLQELLLNETYLEFLPANFGRLVNLRILEVRLNNLITLPKSMVRLVSLQR 183

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+  +LP+ +G EL +L+ L I+ N+I  +  ++  L  L+  +A  N L +LP 
Sbjct: 184 LDIGGNEFTELPEVVG-ELKSLRELWIDFNQIRRVAPNIGKLRELQHFEANGNLLDTLPN 242

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L N  N+EVL+I  N   LE  P+S+G+L SLV      N ++ LPDSI  L +L++L 
Sbjct: 243 ELSNWRNVEVLSICSN--NLEAFPFSVGMLKSLVTFKCESNGLSELPDSISYLEQLEELV 300

Query: 182 LEGNPLVSPPMDV 194
           L  N L+  P  +
Sbjct: 301 LSHNKLMRLPSTI 313



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 58/152 (38%), Positives = 83/152 (54%), Gaps = 3/152 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV VL + SN L+  P S+G L  L       N L  LP +I     LEEL  + NKL +
Sbjct: 249 NVEVLSICSNNLEAFPFSVGMLKSLVTFKCESNGLSELPDSISYLEQLEELVLSHNKLMR 308

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP TIG  L+ L+ L  + N++  LP  L   + L VL    N L +LP+++ +L  L+V
Sbjct: 309 LPSTIG-SLVKLRFLFADDNQLRQLPDELCSCSQLSVLSVANNQLSALPQNIGHLAKLKV 367

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           LN+  N  Y+  LP S+  L++L  L +S N+
Sbjct: 368 LNVVNN--YINALPVSMLSLVNLTSLWLSDNQ 397



 Score = 77.0 bits (188), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 92/176 (52%), Gaps = 6/176 (3%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
            + + N L  LPN +     ++VL +  N LE+ P ++   +SL       N L +LPD+
Sbjct: 230 FEANGNLLDTLPNELSNWRNVEVLSICSNNLEAFPFSVGMLKSLVTFKCESNGLSELPDS 289

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           I + L  L+ L ++ NK++ LP ++  L  LR L A  N L+ LP++L +   L VL+++
Sbjct: 290 ISY-LEQLEELVLSHNKLMRLPSTIGSLVKLRFLFADDNQLRQLPDELCSCSQLSVLSVA 348

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN---PLV 188
            N   L  LP +IG L  L  L+V  N I  LP S+  L  L  L L  N   PLV
Sbjct: 349 NN--QLSALPQNIGHLAKLKVLNVVNNYINALPVSMLSLVNLTSLWLSDNQSQPLV 402



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 87/161 (54%), Gaps = 3/161 (1%)

Query: 36  LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           L+ L +S   L++LP  +  C+ L  L  N N L  +P  IG  L  L+ L +N N IV 
Sbjct: 43  LEELHLSNARLQTLPPQLFYCQGLRILQVNSNNLESIPQAIG-SLRQLQHLDLNRNLIVN 101

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           +P+ +     L  LD   N L+ LP+ + +LI+L+ L +++   YLE LP + G L++L 
Sbjct: 102 VPEEIKACKHLTHLDLSCNSLQRLPDAITSLISLQELLLNET--YLEFLPANFGRLVNLR 159

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
            L+V  N + TLP S+  L  LQ+L + GN     P  V E
Sbjct: 160 ILEVRLNNLITLPKSMVRLVSLQRLDIGGNEFTELPEVVGE 200



 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 106/233 (45%), Gaps = 47/233 (20%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL+N+ +L+V  N L  LP S+  L  L+ LD+ GN    LP+ +   +SL EL  +FN
Sbjct: 153 GRLVNLRILEVRLNNLITLPKSMVRLVSLQRLDIGGNEFTELPEVVGELKSLRELWIDFN 212

Query: 68  KLRQLPDTIG-------FE---------------LINLKTLSINCNKIVILPQSLTHLTS 105
           ++R++   IG       FE                 N++ LSI  N +   P S+  L S
Sbjct: 213 QIRRVAPNIGKLRELQHFEANGNLLDTLPNELSNWRNVEVLSICSNNLEAFPFSVGMLKS 272

Query: 106 LRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLM------------- 152
           L       N L  LP+ +  L  LE L +S N   L  LP +IG L+             
Sbjct: 273 LVTFKCESNGLSELPDSISYLEQLEELVLSHN--KLMRLPSTIGSLVKLRFLFADDNQLR 330

Query: 153 ----------SLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
                      L  L V+ N+++ LP +IG L KL+ L++  N + + P+ ++
Sbjct: 331 QLPDELCSCSQLSVLSVANNQLSALPQNIGHLAKLKVLNVVNNYINALPVSML 383



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 77/141 (54%), Gaps = 8/141 (5%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L ++V     SN L  LP+SI  L +L+ L +S N L  LP TI +   L  L A+ N+L
Sbjct: 270 LKSLVTFKCESNGLSELPDSISYLEQLEELVLSHNKLMRLPSTIGSLVKLRFLFADDNQL 329

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           RQLPD +      L  LS+  N++  LPQ++ HL  L+VL+   N + +LP  + +L+NL
Sbjct: 330 RQLPDELC-SCSQLSVLSVANNQLSALPQNIGHLAKLKVLNVVNNYINALPVSMLSLVNL 388

Query: 130 EVLNISQN-------FQYLET 143
             L +S N        QYL+ 
Sbjct: 389 TSLWLSDNQSQPLVPLQYLDA 409



 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 1/88 (1%)

Query: 5   SLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNA 64
           S    L+ +  L    NQL+ LP+ +   S+L VL V+ N L +LP+ I +   L+ LN 
Sbjct: 311 STIGSLVKLRFLFADDNQLRQLPDELCSCSQLSVLSVANNQLSALPQNIGHLAKLKVLNV 370

Query: 65  NFNKLRQLPDTIGFELINLKTLSINCNK 92
             N +  LP ++   L+NL +L ++ N+
Sbjct: 371 VNNYINALPVSM-LSLVNLTSLWLSDNQ 397


>gi|195144232|ref|XP_002013100.1| GL23942 [Drosophila persimilis]
 gi|194102043|gb|EDW24086.1| GL23942 [Drosophila persimilis]
          Length = 333

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/176 (38%), Positives = 106/176 (60%), Gaps = 3/176 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L ++SN++  LP  IGCL  L+ L ++ N L SLP++++NC+ L+ L+   NKL ++P  
Sbjct: 1   LYLYSNKIGQLPAEIGCLVNLRNLALNENSLTSLPESLQNCKQLKVLDLRHNKLAEIPPV 60

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           I + L  L TL +  N+I  +  +L  L +L +L  R N ++ L   +  L+NL  L++S
Sbjct: 61  I-YRLRTLTTLYLRFNRITAVADNLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVS 119

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            N  +LE LP  IG  ++L  LD+ +N++  +PDSIG L+ L +L L  N L S P
Sbjct: 120 HN--HLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGLRYNRLSSVP 173



 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 103/182 (56%), Gaps = 3/182 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L+N+  L ++ N L  LP S+    +LKVLD+  N L  +P  I   R+L  L   FN++
Sbjct: 18  LVNLRNLALNENSLTSLPESLQNCKQLKVLDLRHNKLAEIPPVIYRLRTLTTLYLRFNRI 77

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             + D +  +L+NL  LS+  NKI  L  ++  L +L  LD   N L+ LPED+ N +NL
Sbjct: 78  TAVADNL-RQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNL 136

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
             L++  N   L  +P SIG L SLV L + YN+++++P ++   + + + ++EGN +  
Sbjct: 137 SALDLQHN--ELLDIPDSIGNLKSLVRLGLRYNRLSSVPATLKNCKSMDEFNVEGNGMTQ 194

Query: 190 PP 191
            P
Sbjct: 195 LP 196



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 75/130 (57%), Gaps = 2/130 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L+N+ +L +  N+++ L ++IG L  L  LDVS N LE LP+ I NC +L  L+   N+
Sbjct: 86  QLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNE 145

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLI 127
           L  +PD+IG  L +L  L +  N++  +P +L +  S+   +   N +  LP+  L +L 
Sbjct: 146 LLDIPDSIG-NLKSLVRLGLRYNRLSSVPATLKNCKSMDEFNVEGNGMTQLPDGMLASLS 204

Query: 128 NLEVLNISQN 137
            L  + +S+N
Sbjct: 205 GLTTITLSRN 214



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 1/107 (0%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +    +N+  LD+  N+L  +P+SIG L  L  L +  N L S+P T++NC+S++E
Sbjct: 126 LPEDI-GNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGLRYNRLSSVPATLKNCKSMDE 184

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRV 108
            N   N + QLPD +   L  L T++++ N+   LP   T     RV
Sbjct: 185 FNVEGNGMTQLPDGMLASLSGLTTITLSRNQFTQLPHRRTGAVHERV 231



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 67/128 (52%), Gaps = 3/128 (2%)

Query: 67  NKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENL 126
           NK+ QLP  IG  L+NL+ L++N N +  LP+SL +   L+VLD R N L  +P  +  L
Sbjct: 6   NKIGQLPAEIGC-LVNLRNLALNENSLTSLPESLQNCKQLKVLDLRHNKLAEIPPVIYRL 64

Query: 127 INLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
             L  L +   F  +  +  ++  L++L  L +  NKI  L  +IG L  L  L +  N 
Sbjct: 65  RTLTTLYL--RFNRITAVADNLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNH 122

Query: 187 LVSPPMDV 194
           L   P D+
Sbjct: 123 LEHLPEDI 130


>gi|418726611|ref|ZP_13285222.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960521|gb|EKO24275.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 447

 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/179 (39%), Positives = 106/179 (59%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  N+L  LPN IG L  L+ L +  N L + PK I   R+L+ LN   N+L  LP  
Sbjct: 99  LDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVE 158

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL+ L++  N++ +LP+ +  L +L+ L+ + N L +LP ++  L NL+ L +S
Sbjct: 159 IG-QLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLS 217

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +N   L T P  IG L +L ELD+  N++T LP  IG L+ L+ L L  N L + P ++
Sbjct: 218 EN--QLTTFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEI 274



 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/186 (40%), Positives = 105/186 (56%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  LD+  NQL   P  I  L KL+ LD+S N L  LP  I   ++L+EL    NK
Sbjct: 69  QLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNK 128

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L   P  IG +L NL+TL++  N++  LP  +  L +L  L+ R N L  LP+++  L N
Sbjct: 129 LITFPKEIG-QLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQN 187

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ LN+  N   L TLP  IG L +L  L +S N++TT P  IG L  LQ+L L  N L 
Sbjct: 188 LQTLNLQDN--QLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLWNNRLT 245

Query: 189 SPPMDV 194
           + P ++
Sbjct: 246 ALPKEI 251



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/194 (37%), Positives = 111/194 (57%), Gaps = 4/194 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+P  +  RL N+  L ++ N+L   P  IG L  L+ L++  N L +LP  I   ++LE
Sbjct: 108 MLPNEI-GRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLE 166

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +LN   N+L  LP  IG +L NL+TL++  N++  LP  +  L +L+ L    N L + P
Sbjct: 167 KLNLRKNRLTVLPKEIG-QLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFP 225

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++  L NL+ L++  N   L  LP  IG L +L  L++S N++TT P  IG L+KLQ L
Sbjct: 226 KEIGQLENLQELDLWNN--RLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDL 283

Query: 181 SLEGNPLVSPPMDV 194
            L  N LV  P ++
Sbjct: 284 GLSYNRLVILPKEI 297



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 111/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+ +N+L  LP  IG L  L+ L++S N L + PK I   + L++L  ++N
Sbjct: 229 GQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYN 288

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L  L+ L ++ N++VILP+ +  L +L++LD   N  K++ + +  L 
Sbjct: 289 RLVILPKEIG-QLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKKIGQLK 347

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  LN+S N   L TLP  IG L +L  LD+  N++TTLP  IG L+ L  L L  N L
Sbjct: 348 NLLQLNLSYN--QLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQL 405

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 406 TTLPKEI 412



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 102/184 (55%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           LNV VL++       LP  I  L  L+ LD+  N L + P  I   + LE L+ + N+L 
Sbjct: 48  LNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLV 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ IG  L NL+ L +  NK++  P+ +  L +L+ L+ + N L +LP ++  L NLE
Sbjct: 108 MLPNEIG-RLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLE 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+ +N   L  LP  IG L +L  L++  N++ TLP  IG L+ LQ L L  N L + 
Sbjct: 167 KLNLRKN--RLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTF 224

Query: 191 PMDV 194
           P ++
Sbjct: 225 PKEI 228



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +  ++RVL+       +LP+++E L NL+ L++  N   L T P  I  L  L 
Sbjct: 40  LTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDN--QLATFPAVIVELQKLE 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LD+S N++  LP+ IG L+ LQ+L L  N L++ P ++
Sbjct: 98  SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEI 136



 Score = 40.8 bits (94), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 30/57 (52%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           NQL  LP  IG L  L  LD+  N L +LPK I   ++L  L    N+L  LP  IG
Sbjct: 357 NQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEIG 413


>gi|254410565|ref|ZP_05024344.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
 gi|196182771|gb|EDX77756.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1117

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 69/205 (33%), Positives = 119/205 (58%), Gaps = 4/205 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE +  +L N+  L +  NQ+  +P  IG L+ L+ L ++GN +  +P+ I    +L+ 
Sbjct: 170 IPECI-GQLTNLQNLVLIGNQITEIPEFIGKLTNLQNLGLTGNQITEIPEFIGKLTNLQL 228

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N++ ++P+ IG +L NL+ L++  N+I  +P+ +  L +L++L+   N +  +PE
Sbjct: 229 LYFGGNQITEMPECIG-QLNNLQILNLWKNQITEMPECIGQLNNLQILNLWKNQITEIPE 287

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L NL+ L++  N   +  +P  IG L++L EL ++ N+IT +P+ IG L  LQKL 
Sbjct: 288 CIGQLNNLQELDLDDN--KITEIPECIGQLINLQELSLTENQITEIPECIGQLTNLQKLI 345

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYL 206
           L+ NPL        + GL  +K YL
Sbjct: 346 LDNNPLNPVVRSAYQSGLDELKAYL 370



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 65/190 (34%), Positives = 105/190 (55%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE +  +L N+  LD+  NQ+  +P  IG L+ LK L +  N +  +P  I    +L  
Sbjct: 32  IPECI-GQLTNLQELDLRENQITEIPECIGQLTNLKKLIIGKNKITEIPGCISQLTNLRF 90

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N++ ++P+ IG +L NLK LS++ N+I  +P+ + +L +L++L    N +  +PE
Sbjct: 91  LGLWENQITEIPEFIG-QLTNLKKLSLSANQITEIPKFIGYLNNLQLLGLSRNQITEIPE 149

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L NL+ L +  N   +  +P  IG L +L  L +  N+IT +P+ IG L  LQ L 
Sbjct: 150 CISQLTNLQNLYLHDN--KITEIPECIGQLTNLQNLVLIGNQITEIPEFIGKLTNLQNLG 207

Query: 182 LEGNPLVSPP 191
           L GN +   P
Sbjct: 208 LTGNQITEIP 217



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 63/190 (33%), Positives = 107/190 (56%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE    +L N+  L + +NQ+  +P  IG L+ L++L +S N +  +P+ I    +L+ 
Sbjct: 101 IPE-FIGQLTNLKKLSLSANQITEIPKFIGYLNNLQLLGLSRNQITEIPECISQLTNLQN 159

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + NK+ ++P+ IG +L NL+ L +  N+I  +P+ +  LT+L+ L    N +  +PE
Sbjct: 160 LYLHDNKITEIPECIG-QLTNLQNLVLIGNQITEIPEFIGKLTNLQNLGLTGNQITEIPE 218

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L NL++L    N   +  +P  IG L +L  L++  N+IT +P+ IG L  LQ L+
Sbjct: 219 FIGKLTNLQLLYFGGN--QITEMPECIGQLNNLQILNLWKNQITEMPECIGQLNNLQILN 276

Query: 182 LEGNPLVSPP 191
           L  N +   P
Sbjct: 277 LWKNQITEIP 286



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 61/184 (33%), Positives = 102/184 (55%), Gaps = 3/184 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++L N+  L +  NQ+  +P  IG L+ LK L +S N +  +PK I    +L+ L  + N
Sbjct: 83  SQLTNLRFLGLWENQITEIPEFIGQLTNLKKLSLSANQITEIPKFIGYLNNLQLLGLSRN 142

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           ++ ++P+ I  +L NL+ L ++ NKI  +P+ +  LT+L+ L    N +  +PE +  L 
Sbjct: 143 QITEIPECIS-QLTNLQNLYLHDNKITEIPECIGQLTNLQNLVLIGNQITEIPEFIGKLT 201

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L ++ N   +  +P  IG L +L  L    N+IT +P+ IG L  LQ L+L  N +
Sbjct: 202 NLQNLGLTGN--QITEIPEFIGKLTNLQLLYFGGNQITEMPECIGQLNNLQILNLWKNQI 259

Query: 188 VSPP 191
              P
Sbjct: 260 TEMP 263



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 56/153 (36%), Positives = 87/153 (56%), Gaps = 3/153 (1%)

Query: 39  LDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ 98
           LD+SG  +  +P+ I    +L+EL+   N++ ++P+ IG +L NLK L I  NKI  +P 
Sbjct: 22  LDLSGKGITEIPECIGQLTNLQELDLRENQITEIPECIG-QLTNLKKLIIGKNKITEIPG 80

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
            ++ LT+LR L    N +  +PE +  L NL+ L++S N   +  +P  IG L +L  L 
Sbjct: 81  CISQLTNLRFLGLWENQITEIPEFIGQLTNLKKLSLSAN--QITEIPKFIGYLNNLQLLG 138

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           +S N+IT +P+ I  L  LQ L L  N +   P
Sbjct: 139 LSRNQITEIPECISQLTNLQNLYLHDNKITEIP 171



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 58/179 (32%), Positives = 97/179 (54%), Gaps = 3/179 (1%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           V  LD+    +  +P  IG L+ L+ LD+  N +  +P+ I    +L++L    NK+ ++
Sbjct: 19  VTELDLSGKGITEIPECIGQLTNLQELDLRENQITEIPECIGQLTNLKKLIIGKNKITEI 78

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P  I  +L NL+ L +  N+I  +P+ +  LT+L+ L    N +  +P+ +  L NL++L
Sbjct: 79  PGCIS-QLTNLRFLGLWENQITEIPEFIGQLTNLKKLSLSANQITEIPKFIGYLNNLQLL 137

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            +S+N   +  +P  I  L +L  L +  NKIT +P+ IG L  LQ L L GN +   P
Sbjct: 138 GLSRN--QITEIPECISQLTNLQNLYLHDNKITEIPECIGQLTNLQNLVLIGNQITEIP 194


>gi|326917475|ref|XP_003205024.1| PREDICTED: leucine-rich repeat-containing protein 30-like
           [Meleagris gallopavo]
          Length = 298

 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 117/211 (55%), Gaps = 12/211 (5%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  +VVL++  N+LKCLP  IG L  LKVL V+ N L  +P  +  CR LE L+ + N
Sbjct: 87  GKLDRLVVLNLGGNRLKCLPKEIGLLRNLKVLFVNMNCLTEVPAELSLCRKLEVLSLSHN 146

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            + QLP +   +L +LK L+++ N+ V +P  +  L SL  L    N L+++ E ++ L+
Sbjct: 147 CISQLPSSFT-DLTSLKKLNLSNNRFVQIPLCIFALRSLDFLHLGSNRLENIAESVQYLV 205

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK-------- 179
           NL++  +  N   + TLP S+  + +L  L+V  N I TLPD +  L +L +        
Sbjct: 206 NLQIFIVENN--NIRTLPRSLCFITALELLNVDNNSIQTLPDDLYLLHRLPRIAWNPMDK 263

Query: 180 -LSLEGNPLVSPPMDVVEQGLSAVKGYLSEK 209
            L +  NPL  P  +++E GL  +  YL EK
Sbjct: 264 GLHISHNPLSRPLPEIIEGGLDVLFNYLKEK 294


>gi|418744883|ref|ZP_13301228.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794214|gb|EKR92124.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 559

 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/196 (37%), Positives = 115/196 (58%), Gaps = 3/196 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++ +NQLK LPN IG L  L+ L++  N L++LP  I    +L+ LN   N
Sbjct: 357 GQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENN 416

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP+ IG +L NL+ L++  N++  LP  +  L +L+ L+   N LK+LP ++  L 
Sbjct: 417 QLKTLPNEIG-QLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGRLE 475

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+  N   L+TLP  IG L +L  L++  N++ TLP  I  L+ LQ L L+  P 
Sbjct: 476 NLQYLNLENN--QLKTLPNEIGRLQNLKVLNLGGNQLVTLPQEIVGLKHLQILKLKNIPA 533

Query: 188 VSPPMDVVEQGLSAVK 203
           +    + + + L  VK
Sbjct: 534 LLSEKETIRKLLPDVK 549



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 106/171 (61%), Gaps = 3/171 (1%)

Query: 25  CLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLK 84
            LPN IG L  L+ L++  N L++LP  I    +L+ LN   N+L+ LP+ IG +L NL+
Sbjct: 351 TLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIG-QLENLQ 409

Query: 85  TLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
            L++  N++  LP  +  L +L+ L+   N LK+LP ++  L NL+ LN+  N   L+TL
Sbjct: 410 YLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENN--QLKTL 467

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
           P  IG L +L  L++  N++ TLP+ IG L+ L+ L+L GN LV+ P ++V
Sbjct: 468 PNEIGRLENLQYLNLENNQLKTLPNEIGRLQNLKVLNLGGNQLVTLPQEIV 518



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/207 (38%), Positives = 114/207 (55%), Gaps = 26/207 (12%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           ++V +LD+  NQL  LPN IG L KL+ L++S N L +LP  I   ++LEEL+   N+L 
Sbjct: 38  MDVRILDLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGRLQNLEELDLFHNRLT 97

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSL-------------THLTSLRVLDARL---- 113
             P+ I   L  LK L +  N++V LP+ +              HL +L     RL    
Sbjct: 98  TFPNEI-VRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLKNNHLATLPSEIGRLQRLK 156

Query: 114 ------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
                 N L +LP+++  L NLE L +  N   L TLP  IG L +L +LDVS N +TTL
Sbjct: 157 RLYLYNNHLMTLPKEIGKLQNLEQLYLEDN--QLTTLPQEIGQLENLQDLDVSNNHLTTL 214

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ IG LR L++L+L  N L++ P ++
Sbjct: 215 PNEIGKLRSLKRLNLSNNLLITLPNEI 241



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/214 (36%), Positives = 117/214 (54%), Gaps = 23/214 (10%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L N+  LDV +N L  LPN IG L  LK L++S NLL +LP  I   ++LEE
Sbjct: 191 LPQEI-GQLENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITLPNEIGKLQNLEE 249

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N+LR LP  IG +L  L+ L +  N+++ LPQ +  L  L  L  + N L++LP 
Sbjct: 250 LNLSNNQLRTLPQEIG-QLQELEWLHLEHNQLITLPQEIGTLQKLEYLYLKNNHLETLPN 308

Query: 122 DLENLINLEVLNISQN---------------------FQYLETLPYSIGLLMSLVELDVS 160
           ++  L +L+ L++  N                        L TLP  IG L +L  L++ 
Sbjct: 309 EIGKLRSLKRLHLEHNQLITLPQEIGTLQNLPNLNLSNNQLATLPNEIGQLENLQYLNLE 368

Query: 161 YNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N++ TLP+ IG L  LQ L+LE N L + P ++
Sbjct: 369 NNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEI 402



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 109/210 (51%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  NQL  LP  IG L  L+ LDVS N L +LP  I   RSL+ LN + N
Sbjct: 173 GKLQNLEQLYLEDNQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNN 232

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP+ IG +L NL+ L+++ N++  LPQ +  L  L  L    N L +LP+++  L 
Sbjct: 233 LLITLPNEIG-KLQNLEELNLSNNQLRTLPQEIGQLQELEWLHLEHNQLITLPQEIGTLQ 291

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI----------------------- 164
            LE L +  N  +LETLP  IG L SL  L + +N++                       
Sbjct: 292 KLEYLYLKNN--HLETLPNEIGKLRSLKRLHLEHNQLITLPQEIGTLQNLPNLNLSNNQL 349

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            TLP+ IG L  LQ L+LE N L + P ++
Sbjct: 350 ATLPNEIGQLENLQYLNLENNQLKTLPNEI 379



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 110/209 (52%), Gaps = 24/209 (11%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  LD+  N+L   PN I  L +LK L ++ N L +LPK I   + L+ L    N
Sbjct: 81  GRLQNLEELDLFHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLKNN 140

Query: 68  KLRQLPDTIGF----------------------ELINLKTLSINCNKIVILPQSLTHLTS 105
            L  LP  IG                       +L NL+ L +  N++  LPQ +  L +
Sbjct: 141 HLATLPSEIGRLQRLKRLYLYNNHLMTLPKEIGKLQNLEQLYLEDNQLTTLPQEIGQLEN 200

Query: 106 LRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
           L+ LD   N L +LP ++  L +L+ LN+S N   L TLP  IG L +L EL++S N++ 
Sbjct: 201 LQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNL--LITLPNEIGKLQNLEELNLSNNQLR 258

Query: 166 TLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           TLP  IG L++L+ L LE N L++ P ++
Sbjct: 259 TLPQEIGQLQELEWLHLEHNQLITLPQEI 287



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/179 (39%), Positives = 106/179 (59%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  NQL  LP  IG L  L  L++S N L +LP  I    +L+ LN   N+L+ LP+ 
Sbjct: 319 LHLEHNQLITLPQEIGTLQNLPNLNLSNNQLATLPNEIGQLENLQYLNLENNQLKTLPNE 378

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL+ L++  N++  LP  +  L +L+ L+   N LK+LP ++  L NL+ LN+ 
Sbjct: 379 IG-QLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLE 437

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L+TLP  IG L +L  L++  N++ TLP+ IG L  LQ L+LE N L + P ++
Sbjct: 438 NN--QLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGRLENLQYLNLENNQLKTLPNEI 494



 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 60/97 (61%), Gaps = 2/97 (2%)

Query: 98  QSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVEL 157
           ++L +   +R+LD   N L +LP ++  L  LE LN+S N   L TLP  IG L +L EL
Sbjct: 32  EALKNPMDVRILDLSDNQLATLPNEIGKLRKLEWLNLSNN--RLTTLPNEIGRLQNLEEL 89

Query: 158 DVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           D+ +N++TT P+ I  L++L+ L L  N LV+ P ++
Sbjct: 90  DLFHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPKEI 126



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 2/75 (2%)

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E L+N +++ +L++S N   L TLP  IG L  L  L++S N++TTLP+ IG L+ L++L
Sbjct: 32  EALKNPMDVRILDLSDN--QLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGRLQNLEEL 89

Query: 181 SLEGNPLVSPPMDVV 195
            L  N L + P ++V
Sbjct: 90  DLFHNRLTTFPNEIV 104


>gi|428297417|ref|YP_007135723.1| adenylate cyclase [Calothrix sp. PCC 6303]
 gi|428233961|gb|AFY99750.1| Adenylate cyclase [Calothrix sp. PCC 6303]
          Length = 1034

 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 110/190 (57%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+   L ++  LD+ +NQL  LP + G L+ L  LD++ N L  LP ++ N  SL+ 
Sbjct: 100 LPESI-GNLTSLTSLDLSANQLNALPEAFGNLTSLTFLDLNSNPLTGLPDSVGNLTSLKH 158

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  N N+L+ LPD+ G  L +L  L ++ N++  LP++  +L+SL  L    N + +LPE
Sbjct: 159 LYLNNNQLKALPDSAG-NLTSLTFLDLSENQLNALPEAFGNLSSLTYLYLSGNQINALPE 217

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + NL NL  L +  N   L TLP SI  L +L +L +S N++  LP++ G L  L  L 
Sbjct: 218 SIGNLTNLRYLYLWNN--QLNTLPESIVNLTNLTDLYLSENQLNALPETFGNLSSLTDLY 275

Query: 182 LEGNPLVSPP 191
           L GN L + P
Sbjct: 276 LSGNQLNALP 285



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 112/194 (57%), Gaps = 4/194 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE+    L ++  L + +NQL  LP + G L+ L+ L ++ N + +LP++I N  SL  
Sbjct: 54  LPEAF-GNLTSLTHLYLSANQLNALPEAFGNLTSLRYLKLNNNQINALPESIGNLTSLTS 112

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L  LP+  G  L +L  L +N N +  LP S+ +LTSL+ L    N LK+LP+
Sbjct: 113 LDLSANQLNALPEAFG-NLTSLTFLDLNSNPLTGLPDSVGNLTSLKHLYLNNNQLKALPD 171

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
              NL +L  L++S+N   L  LP + G L SL  L +S N+I  LP+SIG L  L+ L 
Sbjct: 172 SAGNLTSLTFLDLSEN--QLNALPEAFGNLSSLTYLYLSGNQINALPESIGNLTNLRYLY 229

Query: 182 LEGNPLVSPPMDVV 195
           L  N L + P  +V
Sbjct: 230 LWNNQLNTLPESIV 243



 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/190 (41%), Positives = 108/190 (56%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE+    L ++  L +++NQ+  LP SIG L+ L  LD+S N L +LP+   N  SL  
Sbjct: 77  LPEAF-GNLTSLRYLKLNNNQINALPESIGNLTSLTSLDLSANQLNALPEAFGNLTSLTF 135

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ N N L  LPD++G  L +LK L +N N++  LP S  +LTSL  LD   N L +LPE
Sbjct: 136 LDLNSNPLTGLPDSVG-NLTSLKHLYLNNNQLKALPDSAGNLTSLTFLDLSENQLNALPE 194

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
              NL +L  L +S N   +  LP SIG L +L  L +  N++ TLP+SI  L  L  L 
Sbjct: 195 AFGNLSSLTYLYLSGN--QINALPESIGNLTNLRYLYLWNNQLNTLPESIVNLTNLTDLY 252

Query: 182 LEGNPLVSPP 191
           L  N L + P
Sbjct: 253 LSENQLNALP 262



 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 76/195 (38%), Positives = 118/195 (60%), Gaps = 4/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+S+   L ++  L +++NQLK LP+S G L+ L  LD+S N L +LP+   N  SL  
Sbjct: 146 LPDSV-GNLTSLKHLYLNNNQLKALPDSAGNLTSLTFLDLSENQLNALPEAFGNLSSLTY 204

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N++  LP++IG  L NL+ L +  N++  LP+S+ +LT+L  L    N L +LPE
Sbjct: 205 LYLSGNQINALPESIG-NLTNLRYLYLWNNQLNTLPESIVNLTNLTDLYLSENQLNALPE 263

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
              NL +L  L +S N   L  LP + G L SL  L ++ N++T LP+SIG L KL++L 
Sbjct: 264 TFGNLSSLTDLYLSGN--QLNALPETFGNLSSLTYLYLNSNQLTGLPESIGQLNKLKELI 321

Query: 182 LEGNPLVSPPMDVVE 196
           L  N L++ P ++ +
Sbjct: 322 LYDNKLLTLPQELTK 336



 Score =  100 bits (250), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 106/187 (56%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L ++  L ++ NQL  LP + G L+ L  L +S N L +LP+   N  SL  L  N N
Sbjct: 36  GNLTSLTDLYLNRNQLSTLPEAFGNLTSLTHLYLSANQLNALPEAFGNLTSLRYLKLNNN 95

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           ++  LP++IG  L +L +L ++ N++  LP++  +LTSL  LD   N L  LP+ + NL 
Sbjct: 96  QINALPESIG-NLTSLTSLDLSANQLNALPEAFGNLTSLTFLDLNSNPLTGLPDSVGNLT 154

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L ++ N   L+ LP S G L SL  LD+S N++  LP++ G L  L  L L GN +
Sbjct: 155 SLKHLYLNNN--QLKALPDSAGNLTSLTFLDLSENQLNALPEAFGNLSSLTYLYLSGNQI 212

Query: 188 VSPPMDV 194
            + P  +
Sbjct: 213 NALPESI 219



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 107/193 (55%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+S    L ++  LD+  NQL  LP + G LS L  L +SGN + +LP++I N  +L  
Sbjct: 169 LPDS-AGNLTSLTFLDLSENQLNALPEAFGNLSSLTYLYLSGNQINALPESIGNLTNLRY 227

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+L  LP++I   L NL  L ++ N++  LP++  +L+SL  L    N L +LPE
Sbjct: 228 LYLWNNQLNTLPESI-VNLTNLTDLYLSENQLNALPETFGNLSSLTDLYLSGNQLNALPE 286

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
              NL +L  L ++ N   L  LP SIG L  L EL +  NK+ TLP  +  L +L+KL 
Sbjct: 287 TFGNLSSLTYLYLNSN--QLTGLPESIGQLNKLKELILYDNKLLTLPQELTKLTQLKKLD 344

Query: 182 LEGNPLVSPPMDV 194
           +  N L   P +V
Sbjct: 345 IRNNDLGELPPEV 357



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/176 (39%), Positives = 98/176 (55%), Gaps = 3/176 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L++    L  LP+ IG L+ L  L ++ N L +LP+   N  SL  L  + N+L  LP+ 
Sbjct: 21  LNLSGMDLSELPSEIGNLTSLTDLYLNRNQLSTLPEAFGNLTSLTHLYLSANQLNALPEA 80

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
            G  L +L+ L +N N+I  LP+S+ +LTSL  LD   N L +LPE   NL +L  L+++
Sbjct: 81  FG-NLTSLRYLKLNNNQINALPESIGNLTSLTSLDLSANQLNALPEAFGNLTSLTFLDLN 139

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            N   L  LP S+G L SL  L ++ N++  LPDS G L  L  L L  N L + P
Sbjct: 140 SN--PLTGLPDSVGNLTSLKHLYLNNNQLKALPDSAGNLTSLTFLDLSENQLNALP 193



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/157 (40%), Positives = 90/157 (57%), Gaps = 3/157 (1%)

Query: 35  KLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
           + K L++SG  L  LP  I N  SL +L  N N+L  LP+  G  L +L  L ++ N++ 
Sbjct: 17  QWKELNLSGMDLSELPSEIGNLTSLTDLYLNRNQLSTLPEAFG-NLTSLTHLYLSANQLN 75

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSL 154
            LP++  +LTSLR L    N + +LPE + NL +L  L++S N   L  LP + G L SL
Sbjct: 76  ALPEAFGNLTSLRYLKLNNNQINALPESIGNLTSLTSLDLSAN--QLNALPEAFGNLTSL 133

Query: 155 VELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
             LD++ N +T LPDS+G L  L+ L L  N L + P
Sbjct: 134 TFLDLNSNPLTGLPDSVGNLTSLKHLYLNNNQLKALP 170



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 55/123 (44%), Positives = 74/123 (60%), Gaps = 2/123 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+   L N+  L +  NQL  LP + G LS L  L +SGN L +LP+T  N  SL  
Sbjct: 238 LPESI-VNLTNLTDLYLSENQLNALPETFGNLSSLTDLYLSGNQLNALPETFGNLSSLTY 296

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  N N+L  LP++IG +L  LK L +  NK++ LPQ LT LT L+ LD R N L  LP 
Sbjct: 297 LYLNSNQLTGLPESIG-QLNKLKELILYDNKLLTLPQELTKLTQLKKLDIRNNDLGELPP 355

Query: 122 DLE 124
           +++
Sbjct: 356 EVK 358


>gi|418752836|ref|ZP_13309093.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409966788|gb|EKO34628.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 222

 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 107/173 (61%), Gaps = 7/173 (4%)

Query: 34  SKLKVLDVS----GNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSIN 89
           + ++VLD+     GN L +LPK I N ++L+ELN   N+L  LP+ IG  L  L+TL ++
Sbjct: 49  TDVRVLDLGPPEGGNKLTTLPKEIGNLQNLQELNLEGNQLTTLPEEIG-NLQKLQTLDLS 107

Query: 90  CNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIG 149
            N++  LP+ + +L  L+ LD   N LK+LP+++E L  LE L++  N   L TLP  IG
Sbjct: 108 HNRLTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNN--ELTTLPKEIG 165

Query: 150 LLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAV 202
            L +L EL+++ N+ TTLP  IG L+KL+ L L GNP +    + +++ L  V
Sbjct: 166 NLQNLQELNLNSNQFTTLPKEIGKLQKLKWLYLGGNPFLRSQKEKIQKLLPNV 218



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/108 (43%), Positives = 65/108 (60%), Gaps = 6/108 (5%)

Query: 91  NKIVILPQSLTHLTSLRVLD----ARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPY 146
           +K   L ++L H T +RVLD       N L +LP+++ NL NL+ LN+  N   L TLP 
Sbjct: 36  DKYYNLTEALQHPTDVRVLDLGPPEGGNKLTTLPKEIGNLQNLQELNLEGN--QLTTLPE 93

Query: 147 SIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            IG L  L  LD+S+N++TTLP  IG L+KLQ L L  N L + P ++
Sbjct: 94  EIGNLQKLQTLDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTLPKEI 141



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 2/108 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +   L  +  LD+  N+L  LP  IG L KL+ LD++ N L++LPK IE  + LE 
Sbjct: 91  LPEEI-GNLQKLQTLDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEA 149

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           L+   N+L  LP  IG  L NL+ L++N N+   LP+ +  L  L+ L
Sbjct: 150 LHLGNNELTTLPKEIG-NLQNLQELNLNSNQFTTLPKEIGKLQKLKWL 196



 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 47/84 (55%), Gaps = 1/84 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L  +  LD+  NQLK LP  I  L KL+ L +  N L +LPK I N ++L+ELN N N
Sbjct: 119 GNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSN 178

Query: 68  KLRQLPDTIGFELINLKTLSINCN 91
           +   LP  IG +L  LK L +  N
Sbjct: 179 QFTTLPKEIG-KLQKLKWLYLGGN 201


>gi|418704583|ref|ZP_13265455.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410765799|gb|EKR36494.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 267

 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 104/178 (58%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQ   LP  IG L  L+VL+++GN L SLPK I   ++LE L+   N
Sbjct: 60  GQLQNLERLDLAGNQFTTLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGN 119

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP  IG +L  L+ L+++ N+  I P+ +    SL+ L    + LK+LP+++  L 
Sbjct: 120 QFTSLPKEIG-QLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQ 178

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ L++  N   L +LP  IG L +L EL++  NK+ TLP  IG L+ LQ L L  N
Sbjct: 179 NLQSLHLDGN--QLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIGQLQNLQVLRLYSN 234



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/183 (38%), Positives = 102/183 (55%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L++  NQL  LP  IG L KL+VL+++GN   SLPK I   ++LE L+   N+   
Sbjct: 18  NLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTT 77

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ L++  N++  LP+ +  L +L  LD   N   SLP+++  L  LE 
Sbjct: 78  LPKEIG-QLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEA 136

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LN+  N       P  I    SL  L +S +++ TLP  I  L+ LQ L L+GN L S P
Sbjct: 137 LNLDHN--RFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLTSLP 194

Query: 192 MDV 194
            ++
Sbjct: 195 KEI 197



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 97/175 (55%), Gaps = 3/175 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           ++L+ LP  IG    L+ L++ GN L SLPK I   + L  LN   N+   LP  IG +L
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIG-QL 62

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            NL+ L +  N+   LP+ +  L +LRVL+   N L SLP+++  L NLE L+++ N   
Sbjct: 63  QNLERLDLAGNQFTTLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGN--Q 120

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
             +LP  IG L  L  L++ +N+ T  P  I   + L+ L L G+ L + P +++
Sbjct: 121 FTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEIL 175



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 2/82 (2%)

Query: 113 LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
           L+ L+SLP  +    NLE LN+  N   L +LP  IG L  L  L+++ N+ T+LP  IG
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGN--QLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIG 60

Query: 173 CLRKLQKLSLEGNPLVSPPMDV 194
            L+ L++L L GN   + P ++
Sbjct: 61  QLQNLERLDLAGNQFTTLPKEI 82


>gi|291224779|ref|XP_002732380.1| PREDICTED: Lap1-like, partial [Saccoglossus kowalevskii]
          Length = 1162

 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 110/190 (57%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPESL A L  +  L++ SN L  +P+ IG L  +K L++S N +E +P ++     L E
Sbjct: 244 IPESLYA-LEQLTELNMRSNALTSVPDEIGKLKSMKTLNLSSNKIEKIPASLCALEKLTE 302

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N L  +PD IG +L +++TL ++ NKI  +P SL  L  L  L    N L S+P+
Sbjct: 303 LNMGSNALTSIPDEIG-KLKSMETLDLSFNKIDKIPDSLCALEKLTELYMNDNALTSVPD 361

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +++ LN+S N   +E +P S+  L  L ELD+ YN +T +PD I  L+ +  L+
Sbjct: 362 EIGKLKSMKTLNLSSN--KIEKIPASLCTLEQLTELDMKYNALTAIPDEISKLKSMNILN 419

Query: 182 LEGNPLVSPP 191
           L+ N +   P
Sbjct: 420 LDNNKMEKIP 429



 Score =  101 bits (252), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 123/213 (57%), Gaps = 27/213 (12%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ + ++L ++ +L++ +N++K +P S+  L +L  L ++GN L S+P  I   +S+E 
Sbjct: 549 IPDEI-SKLKSMKILNLDNNKMKKIPASLCALQQLTELYMNGNALTSIPDEIGKLKSMET 607

Query: 62  LNANFNKLRQLPDT-----------------------IGFELINLKTLSINCNKIVILPQ 98
           LN +FNK+ ++PD+                       IG +L ++KTL+++ NKI  +P 
Sbjct: 608 LNLSFNKIEKIPDSLCALEQLTELNMRSNALTSVPDEIG-KLKSMKTLNLSSNKIEKIPA 666

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
           SL  L  L  L  R N L ++P+++  L ++++LN+  N   +E +P S+  L  L ELD
Sbjct: 667 SLCALDQLTELIMRSNALTAIPDEISKLKSMKILNLDNN--KMEKIPDSLCALQQLTELD 724

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           +  N +T++PD IG L+ ++ L+L+ N +   P
Sbjct: 725 IRSNALTSIPDEIGKLKSMKILNLDNNKMEKIP 757



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 114/216 (52%), Gaps = 27/216 (12%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP SL A L  +  L ++ N L  +P+ IG L  ++ L++S N +E +P ++     L E
Sbjct: 572 IPASLCA-LQQLTELYMNGNALTSIPDEIGKLKSMETLNLSFNKIEKIPDSLCALEQLTE 630

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N L  +PD IG +L ++KTL+++ NKI  +P SL  L  L  L  R N L ++P+
Sbjct: 631 LNMRSNALTSVPDEIG-KLKSMKTLNLSSNKIEKIPASLCALDQLTELIMRSNALTAIPD 689

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG--------- 172
           ++  L ++++LN+  N   +E +P S+  L  L ELD+  N +T++PD IG         
Sbjct: 690 EISKLKSMKILNLDNN--KMEKIPDSLCALQQLTELDIRSNALTSIPDEIGKLKSMKILN 747

Query: 173 --------------CLRKLQKLSLEGNPLVSPPMDV 194
                          L KL  L++E N L + P ++
Sbjct: 748 LDNNKMEKIPDSLCALEKLTDLNMEHNALTAIPDEI 783



 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 116/222 (52%), Gaps = 33/222 (14%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP SL A L  +  L++ SN L  +P+ IG L  ++ LD+S N ++ +P ++     L E
Sbjct: 290 IPASLCA-LEKLTELNMGSNALTSIPDEIGKLKSMETLDLSFNKIDKIPDSLCALEKLTE 348

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  N N L  +PD IG +L ++KTL+++ NKI  +P SL  L  L  LD + N L ++P+
Sbjct: 349 LYMNDNALTSVPDEIG-KLKSMKTLNLSSNKIEKIPASLCTLEQLTELDMKYNALTAIPD 407

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDV------SYNKITTLPDSIG--- 172
           ++  L ++ +LN+  N   +E +P S+  L  L ELD+      + N +T++PD I    
Sbjct: 408 EISKLKSMNILNLDNN--KMEKIPDSLCALQQLTELDMNDXXXMASNALTSIPDEISKLK 465

Query: 173 --------------------CLRKLQKLSLEGNPLVSPPMDV 194
                                L++L +L + GN L S P ++
Sbjct: 466 SMKILNLDNNKMKKIPASLCALQQLTELYMNGNALTSIPDEI 507



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 116/193 (60%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ + ++L ++ +L++ +N++K +P S+  L +L  L ++GN L S+P  I   +S++ 
Sbjct: 457 IPDEI-SKLKSMKILNLDNNKMKKIPASLCALQQLTELYMNGNALTSIPDEISKLKSMKI 515

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN  FNK+ ++PD++   L  L  L++  N +  +P  ++ L S+++L+   N +K +P 
Sbjct: 516 LNLYFNKIDKIPDSL-CALEKLTELNMASNALTSIPDEISKLKSMKILNLDNNKMKKIPA 574

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L  L  L  L ++ N   L ++P  IG L S+  L++S+NKI  +PDS+  L +L +L+
Sbjct: 575 SLCALQQLTELYMNGN--ALTSIPDEIGKLKSMETLNLSFNKIEKIPDSLCALEQLTELN 632

Query: 182 LEGNPLVSPPMDV 194
           +  N L S P ++
Sbjct: 633 MRSNALTSVPDEI 645



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 106/177 (59%), Gaps = 3/177 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +L++  ++L  +P+ IG   +L+ LD+S N +  +P+++     L ELN   N L  +PD
Sbjct: 210 ILNLKHSELTIVPSEIGECHELQKLDLSFNKISKIPESLYALEQLTELNMRSNALTSVPD 269

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            IG +L ++KTL+++ NKI  +P SL  L  L  L+   N L S+P+++  L ++E L++
Sbjct: 270 EIG-KLKSMKTLNLSSNKIEKIPASLCALEKLTELNMGSNALTSIPDEIGKLKSMETLDL 328

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           S  F  ++ +P S+  L  L EL ++ N +T++PD IG L+ ++ L+L  N +   P
Sbjct: 329 S--FNKIDKIPDSLCALEKLTELYMNDNALTSVPDEIGKLKSMKTLNLSSNKIEKIP 383



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 120/219 (54%), Gaps = 33/219 (15%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L ++  L++ SN+++ +P S+  L KL  L++  N L S+P  I   +S+E 
Sbjct: 267 VPDEI-GKLKSMKTLNLSSNKIEKIPASLCALEKLTELNMGSNALTSIPDEIGKLKSMET 325

Query: 62  LNANFNKLRQLPDT-----------------------IGFELINLKTLSINCNKIVILPQ 98
           L+ +FNK+ ++PD+                       IG +L ++KTL+++ NKI  +P 
Sbjct: 326 LDLSFNKIDKIPDSLCALEKLTELYMNDNALTSVPDEIG-KLKSMKTLNLSSNKIEKIPA 384

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
           SL  L  L  LD + N L ++P+++  L ++ +LN+  N   +E +P S+  L  L ELD
Sbjct: 385 SLCTLEQLTELDMKYNALTAIPDEISKLKSMNILNLDNN--KMEKIPDSLCALQQLTELD 442

Query: 159 ------VSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
                 ++ N +T++PD I  L+ ++ L+L+ N +   P
Sbjct: 443 MNDXXXMASNALTSIPDEISKLKSMKILNLDNNKMKKIP 481



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 115/237 (48%), Gaps = 49/237 (20%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+SL A L  +  L++ SN L  +P+ IG L  +K L++S N +E +P ++     L E
Sbjct: 618 IPDSLCA-LEQLTELNMRSNALTSVPDEIGKLKSMKTLNLSSNKIEKIPASLCALDQLTE 676

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N L  +PD I  +L ++K L+++ NK+  +P SL  L  L  LD R N L S+P+
Sbjct: 677 LIMRSNALTAIPDEIS-KLKSMKILNLDNNKMEKIPDSLCALQQLTELDIRSNALTSIPD 735

Query: 122 DLENLINLEVLNISQN---------------------FQYLETLPYSIGLLMSLVELDVS 160
           ++  L ++++LN+  N                        L  +P  IG L S+  L++S
Sbjct: 736 EIGKLKSMKILNLDNNKMEKIPDSLCALEKLTDLNMEHNALTAIPDEIGKLKSMTTLNLS 795

Query: 161 YNKITTLPDSI-GCLRKLQ-------------------------KLSLEGNPLVSPP 191
           +NKI  +PDS+   ++KL+                         +LSL GN L + P
Sbjct: 796 FNKIEKIPDSLCAGIKKLKLIHLRLNENKLKEFPWQVIEELPLCELSLCGNKLQTVP 852



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 107/188 (56%), Gaps = 9/188 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ + ++L ++ +L++ +N+++ +P+S+  L +L  LD+  N L S+P  I   +S++ 
Sbjct: 687 IPDEI-SKLKSMKILNLDNNKMEKIPDSLCALQQLTELDIRSNALTSIPDEIGKLKSMKI 745

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + NK+ ++PD++   L  L  L++  N +  +P  +  L S+  L+   N ++ +P+
Sbjct: 746 LNLDNNKMEKIPDSL-CALEKLTDLNMEHNALTAIPDEIGKLKSMTTLNLSFNKIEKIPD 804

Query: 122 DL-ENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCL------ 174
            L   +  L+++++  N   L+  P+ +   + L EL +  NK+ T+PD IG L      
Sbjct: 805 SLCAGIKKLKLIHLRLNENKLKEFPWQVIEELPLCELSLCGNKLQTVPDHIGRLLRYHPC 864

Query: 175 RKLQKLSL 182
           RK + +SL
Sbjct: 865 RKCKHVSL 872



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 24/181 (13%)

Query: 15   VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
            +L++   +L  +P+ IG   KL+ L++S N +  +P ++     L E+N   N L  +PD
Sbjct: 936  MLNLEHGELTIVPSEIGECHKLQKLELSFNKIAKIPDSLCALEKLTEINMGSNALTSIPD 995

Query: 75   TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE--------DLEN- 125
             I  +L ++KTL+++ NKI  +P SL  L  LR+L+   N L ++P         D++N 
Sbjct: 996  EIS-KLKSMKTLNLSFNKIAKIPDSLCALEQLRILNMNGNALTAIPSVKLQHQTLDIDNG 1054

Query: 126  -------------LINLEVLNISQNFQYLETLPYS-IGLLMSLVELDVSYNKITTLPDSI 171
                         +  L+++ +  N   L+  P+  I  L SL +L +  N++ T+PD I
Sbjct: 1055 ASVFSLCFGMSERIKKLKLIRLQLNDNKLKEFPWQIIEELHSLYKLSLCGNELQTVPDHI 1114

Query: 172  G 172
            G
Sbjct: 1115 G 1115



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 61/110 (55%), Gaps = 2/110 (1%)

Query: 82   NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
            +L+ L++   ++ I+P  +     L+ L+   N +  +P+ L  L  L  +N+  N   L
Sbjct: 933  HLRMLNLEHGELTIVPSEIGECHKLQKLELSFNKIAKIPDSLCALEKLTEINMGSN--AL 990

Query: 142  ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
             ++P  I  L S+  L++S+NKI  +PDS+  L +L+ L++ GN L + P
Sbjct: 991  TSIPDEISKLKSMKTLNLSFNKIAKIPDSLCALEQLRILNMNGNALTAIP 1040



 Score = 40.4 bits (93), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 2/67 (2%)

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L +LN+      L  +P  IG    L +L++S+NKI  +PDS+  L KL ++++  N L
Sbjct: 933 HLRMLNLEHG--ELTIVPSEIGECHKLQKLELSFNKIAKIPDSLCALEKLTEINMGSNAL 990

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 991 TSIPDEI 997


>gi|421113137|ref|ZP_15573589.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           JET]
 gi|410801511|gb|EKS07677.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           JET]
          Length = 444

 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/181 (39%), Positives = 105/181 (58%), Gaps = 3/181 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  NQL  LP  IG L KL+ L + G+ L +LPK IE  ++L +L    N
Sbjct: 260 GKLQNLRDLYLGGNQLTTLPKEIGKLQKLQTLHLEGSQLTTLPKGIEKLQNLRDLYLENN 319

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L ++ NK+  LP+ +  L  L+ LD   N L +LP+++  L 
Sbjct: 320 QLTTLPKGIE-KLQNLQELYLSSNKLTTLPEEIEKLQKLQRLDLSKNKLTTLPKEIGKLQ 378

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L  L +  N   L+TLP  IG L SL  L++  N +T+ P+ IG L+KLQ+L L GNP 
Sbjct: 379 KLRGLYLDHN--QLKTLPEEIGNLQSLESLNLRGNSLTSFPEEIGKLQKLQQLYLGGNPF 436

Query: 188 V 188
           +
Sbjct: 437 L 437



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/182 (39%), Positives = 108/182 (59%), Gaps = 3/182 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+ SNQL  LP  IG L KL+ L+++ N L +LP+ I   ++L+EL+   N
Sbjct: 76  GKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQELHLENN 135

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+ L++  N++  LP+ +  L  L+ L    N L +LPE++  L 
Sbjct: 136 QLTTLPEEIG-KLQNLQELNLGFNQLTALPKGIEKLQKLQELHLYSNRLANLPEEIGKLQ 194

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+  N   L  LP  I  L  L +L +  N++T LP+ I  L+ L+ L LEGN L
Sbjct: 195 NLQKLNLGVN--QLTALPKGIEKLQKLQQLYLYSNRLTNLPEEIEKLQNLRDLYLEGNQL 252

Query: 188 VS 189
            +
Sbjct: 253 TT 254



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/193 (37%), Positives = 111/193 (57%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L N+  L +  NQL  L   IG L  L+ L + GN L +LPK I   + L+ 
Sbjct: 232 LPEEI-EKLQNLRDLYLEGNQLTTLSKEIGKLQNLRDLYLGGNQLTTLPKEIGKLQKLQT 290

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   ++L  LP  I  +L NL+ L +  N++  LP+ +  L +L+ L    N L +LPE
Sbjct: 291 LHLEGSQLTTLPKGIE-KLQNLRDLYLENNQLTTLPKGIEKLQNLQELYLSSNKLTTLPE 349

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++E L  L+ L++S+N   L TLP  IG L  L  L + +N++ TLP+ IG L+ L+ L+
Sbjct: 350 EIEKLQKLQRLDLSKN--KLTTLPKEIGKLQKLRGLYLDHNQLKTLPEEIGNLQSLESLN 407

Query: 182 LEGNPLVSPPMDV 194
           L GN L S P ++
Sbjct: 408 LRGNSLTSFPEEI 420



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 109/193 (56%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L N+  L++  NQL  LP  I  L KL+ L +  N L +LP+ IE  ++L +
Sbjct: 186 LPEEI-GKLQNLQKLNLGVNQLTALPKGIEKLQKLQQLYLYSNRLTNLPEEIEKLQNLRD 244

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+L  L   IG +L NL+ L +  N++  LP+ +  L  L+ L    + L +LP+
Sbjct: 245 LYLEGNQLTTLSKEIG-KLQNLRDLYLGGNQLTTLPKEIGKLQKLQTLHLEGSQLTTLPK 303

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +E L NL  L +  N   L TLP  I  L +L EL +S NK+TTLP+ I  L+KLQ+L 
Sbjct: 304 GIEKLQNLRDLYLENN--QLTTLPKGIEKLQNLQELYLSSNKLTTLPEEIEKLQKLQRLD 361

Query: 182 LEGNPLVSPPMDV 194
           L  N L + P ++
Sbjct: 362 LSKNKLTTLPKEI 374



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/172 (38%), Positives = 101/172 (58%), Gaps = 3/172 (1%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELIN 82
           L  LP  IG L  L+ LD+S N L +LPK I   + L++LN   N+L  LP+ IG +L N
Sbjct: 68  LWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIG-KLQN 126

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           L+ L +  N++  LP+ +  L +L+ L+   N L +LP+ +E L  L+ L++  N   L 
Sbjct: 127 LQELHLENNQLTTLPEEIGKLQNLQELNLGFNQLTALPKGIEKLQKLQELHLYSN--RLA 184

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LP  IG L +L +L++  N++T LP  I  L+KLQ+L L  N L + P ++
Sbjct: 185 NLPEEIGKLQNLQKLNLGVNQLTALPKGIEKLQKLQQLYLYSNRLTNLPEEI 236



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/186 (38%), Positives = 106/186 (56%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L  +  L ++SN+L  LP  I  L  L+ L + GN L +L K I   ++L +L    N+
Sbjct: 215 KLQKLQQLYLYSNRLTNLPEEIEKLQNLRDLYLEGNQLTTLSKEIGKLQNLRDLYLGGNQ 274

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG +L  L+TL +  +++  LP+ +  L +LR L    N L +LP+ +E L N
Sbjct: 275 LTTLPKEIG-KLQKLQTLHLEGSQLTTLPKGIEKLQNLRDLYLENNQLTTLPKGIEKLQN 333

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S N   L TLP  I  L  L  LD+S NK+TTLP  IG L+KL+ L L+ N L 
Sbjct: 334 LQELYLSSN--KLTTLPEEIEKLQKLQRLDLSKNKLTTLPKEIGKLQKLRGLYLDHNQLK 391

Query: 189 SPPMDV 194
           + P ++
Sbjct: 392 TLPEEI 397



 Score = 77.0 bits (188), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 87/153 (56%), Gaps = 3/153 (1%)

Query: 42  SGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLT 101
           S + L +LPK I   ++L +L+ + N+L  LP  IG +L  L+ L++  N++  LP+ + 
Sbjct: 64  SNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIG-KLQKLQKLNLTRNRLANLPEEIG 122

Query: 102 HLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSY 161
            L +L+ L    N L +LPE++  L NL+ LN+   F  L  LP  I  L  L EL +  
Sbjct: 123 KLQNLQELHLENNQLTTLPEEIGKLQNLQELNLG--FNQLTALPKGIEKLQKLQELHLYS 180

Query: 162 NKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           N++  LP+ IG L+ LQKL+L  N L + P  +
Sbjct: 181 NRLANLPEEIGKLQNLQKLNLGVNQLTALPKGI 213



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 2/90 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L  +  LD+  N+L  LP  IG L KL+ L +  N L++LP+ I N +SLE 
Sbjct: 347 LPEEI-EKLQKLQRLDLSKNKLTTLPKEIGKLQKLRGLYLDHNQLKTLPEEIGNLQSLES 405

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCN 91
           LN   N L   P+ IG +L  L+ L +  N
Sbjct: 406 LNLRGNSLTSFPEEIG-KLQKLQQLYLGGN 434


>gi|359459073|ref|ZP_09247636.1| GTPase [Acaryochloris sp. CCMEE 5410]
          Length = 1082

 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/195 (37%), Positives = 109/195 (55%), Gaps = 4/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP  LT  L+N+  LD HSNQL  +P  +  L  L  LD+  N L S+P  + +  +L+E
Sbjct: 98  IPLELT-HLVNLRELDCHSNQLTSVPPELAHLENLNKLDLRDNQLTSVPPELAHLENLKE 156

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+L  +P  +  +L NL  LS++ N++  +P +L HL +L VL  R N L SLP 
Sbjct: 157 LYLSANQLTHIPQELA-QLRNLTLLSLSANQLTGVPPALAHLENLEVLSLRTNQLTSLPP 215

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L +L NL  L +  N   L  +P  +  L  L  L +SYN++T+LP     L+ L++L 
Sbjct: 216 ELAHLANLRELYLRSN--KLINVPPELAHLEHLTLLSLSYNQLTSLPPEFAQLKNLKELH 273

Query: 182 LEGNPLVSPPMDVVE 196
           L GN L S P +  +
Sbjct: 274 LSGNQLTSLPPEFAQ 288



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/188 (34%), Positives = 104/188 (55%), Gaps = 3/188 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A+L N+ ++ + +NQL  +P  +  L KL  LD+S N L SLP  +   ++L  L  + N
Sbjct: 34  AKLDNLTLISLSNNQLTSVPPELAQLRKLTALDLSNNQLTSLPPELAQLKNLTLLYLSNN 93

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   +P  +   L+NL+ L  + N++  +P  L HL +L  LD R N L S+P +L +L 
Sbjct: 94  QFTNIPLELT-HLVNLRELDCHSNQLTSVPPELAHLENLNKLDLRDNQLTSVPPELAHLE 152

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +S N   L  +P  +  L +L  L +S N++T +P ++  L  L+ LSL  N L
Sbjct: 153 NLKELYLSAN--QLTHIPQELAQLRNLTLLSLSANQLTGVPPALAHLENLEVLSLRTNQL 210

Query: 188 VSPPMDVV 195
            S P ++ 
Sbjct: 211 TSLPPELA 218



 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 91/169 (53%), Gaps = 3/169 (1%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELIN 82
           L  +P ++  L  L ++ +S N L S+P  +   R L  L+ + N+L  LP  +  +L N
Sbjct: 26  LTNVPLALAKLDNLTLISLSNNQLTSVPPELAQLRKLTALDLSNNQLTSLPPELA-QLKN 84

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           L  L ++ N+   +P  LTHL +LR LD   N L S+P +L +L NL  L++  N   L 
Sbjct: 85  LTLLYLSNNQFTNIPLELTHLVNLRELDCHSNQLTSVPPELAHLENLNKLDLRDN--QLT 142

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           ++P  +  L +L EL +S N++T +P  +  LR L  LSL  N L   P
Sbjct: 143 SVPPELAHLENLKELYLSANQLTHIPQELAQLRNLTLLSLSANQLTGVP 191



 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 3/105 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P  L A L ++ +L +  NQL  LP     L  LK L +SGN L SLP      ++L  
Sbjct: 236 VPPEL-AHLEHLTLLSLSYNQLTSLPPEFAQLKNLKELHLSGNQLTSLPPEFAQLKNLTW 294

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIV-ILPQSLTHLTS 105
           L    N+L  LP     +L NL  L +  N++  I P+ L   T+
Sbjct: 295 LYLRSNQLANLPPEFA-QLKNLTELDLRDNQLSNISPEILAQGTA 338


>gi|24215148|ref|NP_712629.1| hypothetical protein LA_2448 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074467|ref|YP_005988784.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
 gi|417776841|ref|ZP_12424673.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418672944|ref|ZP_13234274.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|24196218|gb|AAN49647.1| putative lipoprotein [Leptospira interrogans serovar Lai str.
           56601]
 gi|353458256|gb|AER02801.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
 gi|410573337|gb|EKQ36387.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410580051|gb|EKQ47882.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 428

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 112/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD++ N+L  LP  IG L  L+ L +S N L +LP+      +L+ELN + N
Sbjct: 114 GKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDN 173

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+TL++  N++  L + +  L +L+ L+   N L +LP ++  L 
Sbjct: 174 QLTTLPQEIG-QLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQ 232

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  LN+S N   L TLP  IG L +L  L++S N++TTLP  IG L+ L  L+L GN L
Sbjct: 233 NLHTLNLSDN--QLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQL 290

Query: 188 VSPPMDV 194
            +  +++
Sbjct: 291 TTLSIEI 297



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 114/208 (54%), Gaps = 24/208 (11%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L +  N+LK LP  IG L  L+ L++S N L  LPK I    +L+ L+   N+
Sbjct: 69  QLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNR 128

Query: 69  LRQLPDTIG----------------------FELINLKTLSINCNKIVILPQSLTHLTSL 106
           L  LP  IG                       +L NL+ L+++ N++  LPQ +  L +L
Sbjct: 129 LTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNL 188

Query: 107 RVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITT 166
           + L+ + N L +L +++E L NL+ LN+S N   L TLP  IG L +L  L++S N++TT
Sbjct: 189 QTLNLKSNQLTTLFKEIEQLKNLQTLNLSDN--QLTTLPIEIGKLQNLHTLNLSDNQLTT 246

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           LP  IG L+ L  L+L  N L + P+++
Sbjct: 247 LPIEIGKLQNLHTLNLSDNQLTTLPIEI 274



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 110/186 (59%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L++  NQL  LP  IG L  L  L++S N L +LP  I   ++L  LN + N+
Sbjct: 207 QLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQ 266

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG +L NL TL+++ N++  L   +  L +L+ L+   N L +L +++E L N
Sbjct: 267 LTTLPIEIG-KLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKN 325

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L++S  +  L  LP  IG L +L EL++  N++T LP  IG L+ LQ LSL  N L+
Sbjct: 326 LQTLSLS--YNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLM 383

Query: 189 SPPMDV 194
           + P ++
Sbjct: 384 TFPKEI 389



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 105/184 (57%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           LNV VLD+       LP  I  L  L+ L +  N L++LPK I   ++L+ELN + N+L 
Sbjct: 48  LNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLT 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG +L NL+ L +  N++ ILP  +  L +L+ L    N L +LP +   L NL+
Sbjct: 108 ILPKEIG-KLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+S N   L TLP  IG L +L  L++  N++TTL   I  L+ LQ L+L  N L + 
Sbjct: 167 ELNLSDN--QLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTL 224

Query: 191 PMDV 194
           P+++
Sbjct: 225 PIEI 228



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 106/202 (52%), Gaps = 4/202 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  NQL  LP  IG L  L  L++S N L +LP  I   ++L  LN + N
Sbjct: 229 GKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGN 288

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  L   IG +L NL+ L+++ N++  L + +  L +L+ L    N L  LP+++  L 
Sbjct: 289 QLTTLSIEIG-KLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQ 347

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEG-NP 186
           NL+ LN+  N   L  LP  IG L +L  L +  N++ T P  IG L+ LQ L L G N 
Sbjct: 348 NLQELNLWNN--QLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHNQ 405

Query: 187 LVSPPMDVVEQGLSAVKGYLSE 208
             S   + + + L   K Y  +
Sbjct: 406 FSSEEKERIRKLLPNCKIYFGD 427



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 60/99 (60%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +  ++RVLD       +LP+++E L NL+ L +  N   L+TLP  IG L +L 
Sbjct: 40  LTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDN--RLKTLPKEIGQLKNLQ 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           EL++S N++T LP  IG L  LQ+L L  N L   P+++
Sbjct: 98  ELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEI 136


>gi|418728092|ref|ZP_13286672.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410777137|gb|EKR57105.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 423

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/227 (37%), Positives = 126/227 (55%), Gaps = 11/227 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL +++NQL  LP  I  L  L++LD+  N L  LPK I   ++L+EL  ++N
Sbjct: 112 GQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYN 171

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ LS+  +++ ILPQ +  L +L  LD   N L  LP+++  L 
Sbjct: 172 QLTTLPKEIG-KLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQ 230

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+   +  N   L  LP  IG L +L EL + +N++T LP  IG L+ LQ+  L+ N  
Sbjct: 231 NLQRFVLDNN--QLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQF 288

Query: 188 VSPPMDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFN 233
              P ++ + Q L  +  YLS   N     PK+   +GKL K  T N
Sbjct: 289 TILPKEIGQLQNLQEL--YLS--YNQLTTFPKE---IGKLQKLQTLN 328



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 112/186 (60%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ +LD+  NQL  LP  IG L  L++L +  N L +LPK I   ++L+ L  N N+
Sbjct: 67  QLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQ 126

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  I  +L NL+ L +  N++ ILP+ +  L +L+ L    N L +LP+++  L N
Sbjct: 127 LTTLPTEIR-QLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIGKLEN 185

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L++L++ ++   L  LP  IG L +L ELD+S+N++T LP  IG L+ LQ+  L+ N L 
Sbjct: 186 LQLLSLYES--QLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLT 243

Query: 189 SPPMDV 194
             P ++
Sbjct: 244 ILPKEI 249



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 108/207 (52%), Gaps = 25/207 (12%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +  +L N+  LD+  NQL  LP  IG L  L+   +  N L  LPK I   ++L 
Sbjct: 198 ILPQEI-GKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLH 256

Query: 61  ELNANFNKLRQLPDTIGF----------------------ELINLKTLSINCNKIVILPQ 98
           EL    N+L  LP  IG                       +L NL+ L ++ N++   P+
Sbjct: 257 ELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPK 316

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
            +  L  L+ L+   N L +LPE++E L NL+ LN+S+N   L+T+P  IG L +L  LD
Sbjct: 317 EIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSEN--QLKTIPQEIGQLQNLKSLD 374

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGN 185
           +  N++T LP  IG L+ LQ+L L  N
Sbjct: 375 LRNNQLTILPKEIGQLKNLQELYLNNN 401



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 105/187 (56%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  NQL  LP  IG L  L++L +  + L  LP+ I   ++L EL+ + N
Sbjct: 158 GQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHN 217

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+   ++ N++ ILP+ +  L +L  L    N L  LP+++  L 
Sbjct: 218 QLTILPKEIG-QLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQ 276

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+   +  N      LP  IG L +L EL +SYN++TT P  IG L+KLQ L+L  N L
Sbjct: 277 NLQRFVLDNN--QFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQL 334

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 335 TTLPEEI 341



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 106/189 (56%), Gaps = 7/189 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L ++ +QL  LP  IG L  L  LD+S N L  LPK I   ++L+    + N
Sbjct: 181 GKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNN 240

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR--VLDARLNCLKSLPEDLEN 125
           +L  LP  IG +L NL  L +  N++ ILP+ +  L +L+  VLD   N    LP+++  
Sbjct: 241 QLTILPKEIG-KLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDN--NQFTILPKEIGQ 297

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L NL+ L +S N   L T P  IG L  L  L++  N++TTLP+ I  L+ L+ L+L  N
Sbjct: 298 LQNLQELYLSYN--QLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSEN 355

Query: 186 PLVSPPMDV 194
            L + P ++
Sbjct: 356 QLKTIPQEI 364



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVL      L +LP++++ L NL++L++  N   L  LP  IG L +L 
Sbjct: 38  LTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHN--QLTALPKEIGQLKNLQ 95

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L + YN++T LP  IG L+ L+ L L  N L + P ++
Sbjct: 96  LLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEI 134



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L N+  L++  NQLK +P  IG L  LK LD+  N L  LPK I   ++L+E
Sbjct: 337 LPEEI-EQLKNLKTLNLSENQLKTIPQEIGQLQNLKSLDLRNNQLTILPKEIGQLKNLQE 395

Query: 62  LNANFNK 68
           L  N N+
Sbjct: 396 LYLNNNQ 402


>gi|307211084|gb|EFN87327.1| Leucine-rich repeat protein SHOC-2 [Harpegnathos saltator]
          Length = 506

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/174 (37%), Positives = 104/174 (59%), Gaps = 3/174 (1%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           ++ N+L  LP+ IGCL+ L+ L ++ N L SLP T+EN + L  L+   NKL ++PD + 
Sbjct: 55  LYGNKLVSLPSQIGCLTNLETLALNENSLTSLPNTLENLKRLRVLDLRHNKLNEIPDVV- 113

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
           ++L +L TL +  N+I  +  ++ +LT+L  L  R N +K LP  + + +NL   ++S N
Sbjct: 114 YKLKSLVTLFLRFNRIKYVSDNIRNLTNLATLSLRENKIKELPSGIGDFLNLHTFDVSHN 173

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
             +L+ LP  IG  + L  LD+ +N +  +PDSIG L  L +L L  N L S P
Sbjct: 174 --HLDHLPEEIGKCVQLSTLDLQHNDLLDIPDSIGNLVLLMRLGLRYNALTSIP 225



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 99/182 (54%), Gaps = 3/182 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+  L ++ N L  LPN++  L +L+VLD+  N L  +P  +   +SL  L   FN++
Sbjct: 70  LTNLETLALNENSLTSLPNTLENLKRLRVLDLRHNKLNEIPDVVYKLKSLVTLFLRFNRI 129

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           + + D I   L NL TLS+  NKI  LP  +    +L   D   N L  LPE++   + L
Sbjct: 130 KYVSDNIR-NLTNLATLSLRENKIKELPSGIGDFLNLHTFDVSHNHLDHLPEEIGKCVQL 188

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
             L++  N   L  +P SIG L+ L+ L + YN +T++P+S+   + + + S+EGN +  
Sbjct: 189 STLDLQHN--DLLDIPDSIGNLVLLMRLGLRYNALTSIPESLSNCKLMDEFSVEGNHVSQ 246

Query: 190 PP 191
            P
Sbjct: 247 VP 248



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 100/177 (56%), Gaps = 5/177 (2%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           +N+V L++ +NQL  +P+ I  L  L+VL +S NLL+ L  +I N R L  L+   N+L 
Sbjct: 327 VNMVELNLGTNQLTKIPDDIQFLQNLEVLILSNNLLKRLSASIANLRKLRVLDLEENRLE 386

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ IGF L  L+ L +  N++  LP+++ HLT+L V     N L  LPE++  L NLE
Sbjct: 387 SLPNEIGF-LRELQQLVLQSNQLTSLPRAIGHLTNLTVFSVGENNLNYLPEEIGTLENLE 445

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI---GCLRKLQKLSLEG 184
            L+I+ N   L  LP+ + L   L+ + +    ++ +P  I   G    +Q L ++G
Sbjct: 446 TLHINDNAN-LHNLPFELALCPKLIFMSIDNCPLSLMPPEIVAGGPAMVIQFLKMQG 501



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 110/238 (46%), Gaps = 51/238 (21%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  + + +  LD+  N L  +P+SIG L  L  L +  N L S+P+++ NC+ ++E
Sbjct: 178 LPEEI-GKCVQLSTLDLQHNDLLDIPDSIGNLVLLMRLGLRYNALTSIPESLSNCKLMDE 236

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQS---------------------- 99
            +   N + Q+PD +   L NL T++++ N     P                        
Sbjct: 237 FSVEGNHVSQVPDGLLSSLSNLTTITLSRNNFTSYPSGGPSQFTNIYSISMEQNQIDKIP 296

Query: 100 ------LTHLTSLRVLDARL--------------------NCLKSLPEDLENLINLEVLN 133
                    LT L + D +L                    N L  +P+D++ L NLEVL 
Sbjct: 297 YGIFSRAKKLTKLNMRDNQLTALPLDIGTWVNMVELNLGTNQLTKIPDDIQFLQNLEVLI 356

Query: 134 ISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           +S N   L+ L  SI  L  L  LD+  N++ +LP+ IG LR+LQ+L L+ N L S P
Sbjct: 357 LSNNL--LKRLSASIANLRKLRVLDLEENRLESLPNEIGFLRELQQLVLQSNQLTSLP 412



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 96/184 (52%), Gaps = 4/184 (2%)

Query: 3   PESLTARLLNVVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEE 61
           P    ++  N+  + +  NQ+  +P  I   +K L  L++  N L +LP  I    ++ E
Sbjct: 272 PSGGPSQFTNIYSISMEQNQIDKIPYGIFSRAKKLTKLNMRDNQLTALPLDIGTWVNMVE 331

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N+L ++PD I F L NL+ L ++ N +  L  S+ +L  LRVLD   N L+SLP 
Sbjct: 332 LNLGTNQLTKIPDDIQF-LQNLEVLILSNNLLKRLSASIANLRKLRVLDLEENRLESLPN 390

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L  L+ L +  N   L +LP +IG L +L    V  N +  LP+ IG L  L+ L 
Sbjct: 391 EIGFLRELQQLVLQSN--QLTSLPRAIGHLTNLTVFSVGENNLNYLPEEIGTLENLETLH 448

Query: 182 LEGN 185
           +  N
Sbjct: 449 INDN 452



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 25/209 (11%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+  L +  N++K LP+ IG    L   DVS N L+ LP+ I  C  L  L+   N L
Sbjct: 139 LTNLATLSLRENKIKELPSGIGDFLNLHTFDVSHNHLDHLPEEIGKCVQLSTLDLQHNDL 198

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLIN 128
             +PD+IG  L+ L  L +  N +  +P+SL++   +       N +  +P+  L +L N
Sbjct: 199 LDIPDSIG-NLVLLMRLGLRYNALTSIPESLSNCKLMDEFSVEGNHVSQVPDGLLSSLSN 257

Query: 129 LEVLNISQN----------FQY------------LETLPYSI-GLLMSLVELDVSYNKIT 165
           L  + +S+N           Q+            ++ +PY I      L +L++  N++T
Sbjct: 258 LTTITLSRNNFTSYPSGGPSQFTNIYSISMEQNQIDKIPYGIFSRAKKLTKLNMRDNQLT 317

Query: 166 TLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LP  IG    + +L+L  N L   P D+
Sbjct: 318 ALPLDIGTWVNMVELNLGTNQLTKIPDDI 346



 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNS-IGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +P+ L + L N+  + +  N     P+      + +  + +  N ++ +P  I    + L
Sbjct: 247 VPDGLLSSLSNLTTITLSRNNFTSYPSGGPSQFTNIYSISMEQNQIDKIPYGIFSRAKKL 306

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP  IG   +N+  L++  N++  +P  +  L +L VL    N LK L
Sbjct: 307 TKLNMRDNQLTALPLDIG-TWVNMVELNLGTNQLTKIPDDIQFLQNLEVLILSNNLLKRL 365

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
              + NL  L VL++ +N   LE+LP  IG L  L +L +  N++T+LP +IG L  L  
Sbjct: 366 SASIANLRKLRVLDLEEN--RLESLPNEIGFLRELQQLVLQSNQLTSLPRAIGHLTNLTV 423

Query: 180 LSLEGNPLVSPPMDV 194
            S+  N L   P ++
Sbjct: 424 FSVGENNLNYLPEEI 438



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 72/141 (51%), Gaps = 5/141 (3%)

Query: 54  ENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL 113
           + C+ L +L+     +  LP T+  +L +LK   +  NK+V LP  +  LT+L  L    
Sbjct: 24  DECKKLLDLSKA--SITHLPSTVR-DLTHLKEFYLYGNKLVSLPSQIGCLTNLETLALNE 80

Query: 114 NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGC 173
           N L SLP  LENL  L VL++  N   L  +P  +  L SLV L + +N+I  + D+I  
Sbjct: 81  NSLTSLPNTLENLKRLRVLDLRHN--KLNEIPDVVYKLKSLVTLFLRFNRIKYVSDNIRN 138

Query: 174 LRKLQKLSLEGNPLVSPPMDV 194
           L  L  LSL  N +   P  +
Sbjct: 139 LTNLATLSLRENKIKELPSGI 159


>gi|260823987|ref|XP_002606949.1| hypothetical protein BRAFLDRAFT_200524 [Branchiostoma floridae]
 gi|229292295|gb|EEN62959.1| hypothetical protein BRAFLDRAFT_200524 [Branchiostoma floridae]
          Length = 835

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 110/204 (53%), Gaps = 4/204 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+++  +  ++ VL +  N+LK LP  I  L+KLK L +  N  E  P+ +    SLE 
Sbjct: 31  IPQTVL-QYTDLEVLKLSFNKLKTLPKGIAKLTKLKYLWLDFNQFEEFPEVVCELTSLEH 89

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + NKLR +   I  +L NLK L ++ NK+ +LP  + H+ SL  L    N +  LPE
Sbjct: 90  LYLSQNKLRHVSPRIR-QLQNLKVLFLHKNKLTMLPNEIFHIVSLLDLHISENQIVELPE 148

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           D+  L N  +L   +N   +  LP S+  L  L  +D + N++  LPD  G      ++S
Sbjct: 149 DIGRLENHTMLRGWEN--QIRYLPDSVCRLKKLKCIDFAMNQLQVLPDGFGKALSAAEVS 206

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGY 205
           L GNPLV PP +V  +G+ A+  Y
Sbjct: 207 LYGNPLVQPPFEVCSEGVKAIADY 230


>gi|260832209|ref|XP_002611050.1| hypothetical protein BRAFLDRAFT_206003 [Branchiostoma floridae]
 gi|229296420|gb|EEN67060.1| hypothetical protein BRAFLDRAFT_206003 [Branchiostoma floridae]
          Length = 454

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 118/214 (55%), Gaps = 23/214 (10%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +LLN+  L ++   +  LP + G L++LKVL+V  N +++LPK+I     LE 
Sbjct: 121 LPDGFT-QLLNLTELYLNDTFMDYLPGNFGRLTRLKVLEVRENHMKTLPKSISRLILLER 179

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N   +LP+ +   + +L+ L ++ N I   PQ++ +L  L  LDA  N L+ LPE
Sbjct: 180 LDMGNNDFSELPEVVC-HMSSLQELWVDSNAIHTFPQAIRYLQRLSFLDASKNQLEDLPE 238

Query: 122 DLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELDVS 160
           ++E+L  +  L++S N                        L +LP+SIG L SL ELDVS
Sbjct: 239 EVEHLTKMTDLHLSTNLLQDLPAGIGALTQLVVLKVDDNQLLSLPHSIGGLASLQELDVS 298

Query: 161 YNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           YN +  LP +IG LR+L+ L  + N L+  P ++
Sbjct: 299 YNDLEHLPPTIGLLRRLRTLIADENCLMELPAEL 332



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 99/180 (55%), Gaps = 5/180 (2%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  N+L  LP ++  L  L  LD+S N +  LP++I+ C++L  + A+ N L +LPD 
Sbjct: 65  LGLSDNELLMLPPAVASLVSLTELDISKNGIRDLPESIKACKNLTYVEASVNPLGKLPD- 123

Query: 76  IGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            GF +L+NL  L +N   +  LP +   LT L+VL+ R N +K+LP+ +  LI LE L++
Sbjct: 124 -GFTQLLNLTELYLNDTFMDYLPGNFGRLTRLKVLEVRENHMKTLPKSISRLILLERLDM 182

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N      LP  +  + SL EL V  N I T P +I  L++L  L    N L   P +V
Sbjct: 183 GNN--DFSELPEVVCHMSSLQELWVDSNAIHTFPQAIRYLQRLSFLDASKNQLEDLPEEV 240



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 94/162 (58%), Gaps = 4/162 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +   L  +  L + +N L+ LP  IG L++L VL V  N L SLP +I    SL+E
Sbjct: 236 LPEEV-EHLTKMTDLHLSTNLLQDLPAGIGALTQLVVLKVDDNQLLSLPHSIGGLASLQE 294

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ ++N L  LP TIG  L  L+TL  + N ++ LP  L   +S+ VL  R N L+ LP+
Sbjct: 295 LDVSYNDLEHLPPTIGL-LRRLRTLIADENCLMELPAELGSCSSMTVLSVRSNQLERLPD 353

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           ++  + NL+V+N+S N   LE LP++   L  L  L ++ N+
Sbjct: 354 EIGRIPNLKVINVSDN--RLEFLPFNFTKLKKLWALWLAENQ 393



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 3/173 (1%)

Query: 19  HSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGF 78
           H+N     P        L+ L +  N +  LP+ +  C  L++L  + N+L  LP  +  
Sbjct: 22  HANLEHAPPEIFEYTKSLEELYLDSNQIRDLPRPLFMCHGLQKLGLSDNELLMLPPAVA- 80

Query: 79  ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNF 138
            L++L  L I+ N I  LP+S+    +L  ++A +N L  LP+    L+NL  L ++  F
Sbjct: 81  SLVSLTELDISKNGIRDLPESIKACKNLTYVEASVNPLGKLPDGFTQLLNLTELYLNDTF 140

Query: 139 QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
             ++ LP + G L  L  L+V  N + TLP SI  L  L++L +  N     P
Sbjct: 141 --MDYLPGNFGRLTRLKVLEVRENHMKTLPKSISRLILLERLDMGNNDFSELP 191


>gi|455789995|gb|EMF41891.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 595

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/184 (38%), Positives = 108/184 (58%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           LNV VL++   +L  LP  IG L  L+ L++  NLL  LPK I    +L+EL+   N+L 
Sbjct: 48  LNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLA 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
             P  I  EL  L++L ++ N+++ILP  +  L +L+ L    N L + P+++  L NL+
Sbjct: 108 TFPAVI-VELQKLESLDLSENRLIILPNEIGQLQNLQDLGLYKNKLTTFPKEIGQLQNLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +S+N   L  LP  IG L +L  LD+  N+ TTLP  IG L+ LQ L+L+ N L + 
Sbjct: 167 KLWLSEN--RLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATL 224

Query: 191 PMDV 194
           P+++
Sbjct: 225 PVEI 228



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 104/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQL   P  I  L KL+ LD+S N L  LP  I   ++L++L    N
Sbjct: 91  GQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGQLQNLQDLGLYKN 150

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL   P  IG +L NL+ L ++ N++  LP+ +  L +L+ LD + N   +LP+++  L 
Sbjct: 151 KLTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQ 209

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+  N   L TLP  IG L +L EL +  N++T  P  IG L+ LQ L    N L
Sbjct: 210 NLQTLNLQDN--QLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLGSPENRL 267

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 268 TALPKEM 274



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 102/183 (55%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L+++      LP  I  L  LK L +  N L+++P  I   ++LE LN   N+L +
Sbjct: 377 NLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELER 436

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ LS++ N + I P  +  L  L+ LD  +N   + P+++  L NL+ 
Sbjct: 437 LPKEIG-QLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQT 495

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LN+ +N   L  L   IG L +L ELD++ N+ T LP  IG L+KLQ L L  N L + P
Sbjct: 496 LNLQRN--QLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP 553

Query: 192 MDV 194
            ++
Sbjct: 554 TEI 556



 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 71/197 (36%), Positives = 107/197 (54%), Gaps = 9/197 (4%)

Query: 4   ESLTA------RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCR 57
           E LTA      +L N+  L++  N L  LP  IG L  L+ LD+  N L + P  I   +
Sbjct: 58  EKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPAVIVELQ 117

Query: 58  SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK 117
            LE L+ + N+L  LP+ IG +L NL+ L +  NK+   P+ +  L +L+ L    N L 
Sbjct: 118 KLESLDLSENRLIILPNEIG-QLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLT 176

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
           +LP+++  L NL+ L++  N     TLP  IG L +L  L++  N++ TLP  IG L+ L
Sbjct: 177 ALPKEIGQLKNLQTLDLQDN--QFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNL 234

Query: 178 QKLSLEGNPLVSPPMDV 194
           Q+L L  N L   P ++
Sbjct: 235 QELYLRNNRLTVFPKEI 251



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 102/180 (56%), Gaps = 3/180 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +RL N+  L +  N LK +P+ IG L  L+ L++  N LE LPK I   R+L++L+ + N
Sbjct: 396 SRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQN 455

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+  P  I  +L  L+ L ++ N+    P+ +  L +L+ L+ + N L +L  ++  L 
Sbjct: 456 TLKIFPAEIE-QLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQ 514

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L+++ N      LP  IG L  L  LD+  N++TTLP  IG L+ LQ L L+ N L
Sbjct: 515 NLQELDLNDN--QFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQL 572



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 96/173 (55%), Gaps = 8/173 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  N+L  LP  IG L  L+ LD+  N   +LPK I   ++L+ LN   N
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDN 219

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +  N++ + P+ +  L +L++L +  N L +LP+++  L 
Sbjct: 220 QLATLPVEIG-QLQNLQELYLRNNRLTVFPKEIGQLQNLQMLGSPENRLTALPKEMGQLQ 278

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           NL+ LN+  N   L   P  IG L +L +L++  N     P S+   +++QKL
Sbjct: 279 NLQTLNLVNN--RLTVFPKEIGQLQNLQDLELLMN-----PLSLKERKRIQKL 324



 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 103/238 (43%), Gaps = 53/238 (22%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L    N+L  LP  +G L  L+ L++  N L   PK I   ++L++L    N
Sbjct: 252 GQLQNLQMLGSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMN 311

Query: 68  KL---------RQLPDT------------------------IGFEL-INLKTLSINCNKI 93
            L         +  PD+                          FEL +  K  S +  K+
Sbjct: 312 PLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKV 371

Query: 94  VI-----------------LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQ 136
           ++                 LP+ ++ L +L+ L   LN LK++P ++  L NLE LN+  
Sbjct: 372 ILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEA 431

Query: 137 NFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           N   LE LP  IG L +L +L +  N +   P  I  L+KLQKL L  N   + P ++
Sbjct: 432 N--ELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEI 487



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L + L+N +N+ VLN+S   + L  LP  IG L +L EL++ +N +T LP  IG L  
Sbjct: 38  RDLTKALQNPLNVRVLNLS--GEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLEN 95

Query: 177 LQKLSLEGNPLVSPPMDVVE 196
           LQ+L L  N L + P  +VE
Sbjct: 96  LQELDLRDNQLATFPAVIVE 115


>gi|418726059|ref|ZP_13284671.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960840|gb|EKO24593.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 267

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 116/216 (53%), Gaps = 23/216 (10%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L++  NQL  LP  IG L KL+VL+++GN   SLPK I   ++LE L+ + N+   
Sbjct: 18  NLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTS 77

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ L++  N++  LP+ +  L +L  LD   N   SLP+++  L  LE 
Sbjct: 78  LPKEIG-QLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEA 136

Query: 132 LNISQN---------------------FQYLETLPYSIGLLMSLVELDVSYNKITTLPDS 170
           LN+  N                        L+TLP  I LL +L  L +  N++T+LP  
Sbjct: 137 LNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLTSLPKE 196

Query: 171 IGCLRKLQKLSLEGNPLVSPPMDVVE-QGLSAVKGY 205
           IG L+ L +L+L+ N L + P ++ + Q L  ++ Y
Sbjct: 197 IGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLY 232



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 103/178 (57%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQ   LP  IG L  L+VL+++GN L SLPK I   ++LE L+   N
Sbjct: 60  GQLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGN 119

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP  IG +L  L+ L+++ N+  I P+ +    SL+ L    + LK+LP+++  L 
Sbjct: 120 QFTSLPKEIG-QLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQ 178

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ L++  N   L +LP  IG L +L EL++  NK+ TLP  I  L+ LQ L L  N
Sbjct: 179 NLQSLHLDSN--QLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSN 234



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 98/175 (56%), Gaps = 3/175 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           ++L+ LP  IG    L+ L++ GN L SLPK I   + L  LN   N+   LP  IG +L
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIG-QL 62

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            NL+ L ++ N+   LP+ +  L +LRVL+   N L SLP+++  L NLE L+++ N   
Sbjct: 63  QNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGN--Q 120

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
             +LP  IG L  L  L++ +N+ T  P  I   + L+ L L G+ L + P +++
Sbjct: 121 FTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEIL 175



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 2/82 (2%)

Query: 113 LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
           L+ L+SLP  +    NLE LN+  N   L +LP  IG L  L  L+++ N+ T+LP  IG
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGN--QLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIG 60

Query: 173 CLRKLQKLSLEGNPLVSPPMDV 194
            L+ L++L L+GN   S P ++
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEI 82


>gi|421100175|ref|ZP_15560811.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796765|gb|EKR98888.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 406

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/216 (38%), Positives = 122/216 (56%), Gaps = 11/216 (5%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  LD+ +NQLK LP  IG L  L+ L+VS N L  LP+ I   ++LE+LN + N+L  
Sbjct: 72  NLKHLDLSNNQLKALPKEIGQLQNLQKLNVSVNNLIELPQEIGQLQNLEQLNLSGNRLTT 131

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L  L+TL +  N++ ILP+ +  L +L  L    N L SLPE++  L   E 
Sbjct: 132 LPQEIG-QLKKLETLHVYYNRLTILPKEIGQLQNLEELILYGNSLTSLPEEIGQLQKFEK 190

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N   L TLP  +  L +L ++ +  N++T+LP  IG LRKL  L L  N L + P
Sbjct: 191 LYLHDN--QLTTLPQGLCKLQNLEQIYLHQNRLTSLPKEIGQLRKLWTLYLYSNELTTLP 248

Query: 192 MDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGKL 226
            ++ + Q L      LS K+NN    PK+   +G+L
Sbjct: 249 EEIGQLQNLRQ----LSLKLNNLTTLPKE---IGQL 277



 Score =  101 bits (251), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L ++ N L  LP  IG L K + L +  N L +LP+ +   ++LE++  + N
Sbjct: 160 GQLQNLEELILYGNSLTSLPEEIGQLQKFEKLYLHDNQLTTLPQGLCKLQNLEQIYLHQN 219

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L  L TL +  N++  LP+ +  L +LR L  +LN L +LP+++  L 
Sbjct: 220 RLTSLPKEIG-QLRKLWTLYLYSNELTTLPEEIGQLQNLRQLSLKLNNLTTLPKEIGQLQ 278

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++S N   L  +P  IG L +L  LD+S N +TTLP  IG L+ L+ L L GN L
Sbjct: 279 NLDNLDLSDN--QLTLIPKEIGQLQNLKLLDLSGNSLTTLPKEIGQLQNLKLLDLSGNSL 336

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 337 TTLPKEI 343



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 106/187 (56%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L+V  N L  LP  IG L  L+ L++SGN L +LP+ I   + LE L+  +N
Sbjct: 91  GQLQNLQKLNVSVNNLIELPQEIGQLQNLEQLNLSGNRLTTLPQEIGQLKKLETLHVYYN 150

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +  N +  LP+ +  L     L    N L +LP+ L  L 
Sbjct: 151 RLTILPKEIG-QLQNLEELILYGNSLTSLPEEIGQLQKFEKLYLHDNQLTTLPQGLCKLQ 209

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NLE + + QN   L +LP  IG L  L  L +  N++TTLP+ IG L+ L++LSL+ N L
Sbjct: 210 NLEQIYLHQN--RLTSLPKEIGQLRKLWTLYLYSNELTTLPEEIGQLQNLRQLSLKLNNL 267

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 268 TTLPKEI 274



 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 104/184 (56%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           ++V VLD+ S  L   P  I     LK LD+S N L++LPK I   ++L++LN + N L 
Sbjct: 48  MDVGVLDLSSKLLTTFPKGIEKFQNLKHLDLSNNQLKALPKEIGQLQNLQKLNVSVNNLI 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
           +LP  IG +L NL+ L+++ N++  LPQ +  L  L  L    N L  LP+++  L NLE
Sbjct: 108 ELPQEIG-QLQNLEQLNLSGNRLTTLPQEIGQLKKLETLHVYYNRLTILPKEIGQLQNLE 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +  N   L +LP  IG L    +L +  N++TTLP  +  L+ L+++ L  N L S 
Sbjct: 167 ELILYGN--SLTSLPEEIGQLQKFEKLYLHDNQLTTLPQGLCKLQNLEQIYLHQNRLTSL 224

Query: 191 PMDV 194
           P ++
Sbjct: 225 PKEI 228



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/185 (38%), Positives = 104/185 (56%), Gaps = 4/185 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L     L +H NQL  LP  +  L  L+ + +  N L SLPK I   R L  
Sbjct: 178 LPEEI-GQLQKFEKLYLHDNQLTTLPQGLCKLQNLEQIYLHQNRLTSLPKEIGQLRKLWT 236

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+L  LP+ IG +L NL+ LS+  N +  LP+ +  L +L  LD   N L  +P+
Sbjct: 237 LYLYSNELTTLPEEIG-QLQNLRQLSLKLNNLTTLPKEIGQLQNLDNLDLSDNQLTLIPK 295

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L NL++L++S N   L TLP  IG L +L  LD+S N +TTLP  IG L+ L  L+
Sbjct: 296 EIGQLQNLKLLDLSGN--SLTTLPKEIGQLQNLKLLDLSGNSLTTLPKEIGQLKNLYFLA 353

Query: 182 LEGNP 186
           ++G P
Sbjct: 354 MKGIP 358



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 111/215 (51%), Gaps = 25/215 (11%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L N+  L++  N+L  LP  IG L KL+ L V  N L  LPK I   ++LEE
Sbjct: 109 LPQEI-GQLQNLEQLNLSGNRLTTLPQEIGQLKKLETLHVYYNRLTILPKEIGQLQNLEE 167

Query: 62  LNANFNKLRQLPDTIG----FE------------------LINLKTLSINCNKIVILPQS 99
           L    N L  LP+ IG    FE                  L NL+ + ++ N++  LP+ 
Sbjct: 168 LILYGNSLTSLPEEIGQLQKFEKLYLHDNQLTTLPQGLCKLQNLEQIYLHQNRLTSLPKE 227

Query: 100 LTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDV 159
           +  L  L  L    N L +LPE++  L NL  L++  N   L TLP  IG L +L  LD+
Sbjct: 228 IGQLRKLWTLYLYSNELTTLPEEIGQLQNLRQLSLKLN--NLTTLPKEIGQLQNLDNLDL 285

Query: 160 SYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           S N++T +P  IG L+ L+ L L GN L + P ++
Sbjct: 286 SDNQLTLIPKEIGQLQNLKLLDLSGNSLTTLPKEI 320



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 58/99 (58%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   + VLD     L + P+ +E   NL+ L++S N   L+ LP  IG L +L 
Sbjct: 40  LTEALKNPMDVGVLDLSSKLLTTFPKGIEKFQNLKHLDLSNN--QLKALPKEIGQLQNLQ 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +L+VS N +  LP  IG L+ L++L+L GN L + P ++
Sbjct: 98  KLNVSVNNLIELPQEIGQLQNLEQLNLSGNRLTTLPQEI 136


>gi|255087408|ref|XP_002505627.1| predicted protein [Micromonas sp. RCC299]
 gi|226520897|gb|ACO66885.1| predicted protein [Micromonas sp. RCC299]
          Length = 573

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 116/204 (56%), Gaps = 6/204 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P  L  RL  +  L +H N+L  LP  IG L+ L+ L + GN L S+P  I    +L 
Sbjct: 19  VVPAEL-GRLSALRKLSLHGNELTSLPAEIGQLTSLEGLRLFGNQLTSVPAEIGQLTALR 77

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+   N+L  +P  IG +L +L+ L++N N++  +P  +  LTSL  L    N L S+P
Sbjct: 78  ELSLAANRLMSVPAEIG-QLTSLRELNLNSNQLTNVPAEIGQLTSLEGLRLYGNRLTSVP 136

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E++  L +L VL +  N     ++P  IG L +L EL +  N++T++P  IG L  L +L
Sbjct: 137 EEIGQLTSLVVLVLGGN--QFTSVPAEIGQLTALRELRLDGNRLTSVPAEIGQLTSLGEL 194

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKG 204
           SL GN L S P ++ +  L+ +KG
Sbjct: 195 SLSGNQLTSVPAEIGQ--LTLLKG 216



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 99/179 (55%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  NQL  +P  IG L+ L+ L ++ N L S+P  I    SL ELN N N+L  +P  
Sbjct: 56  LRLFGNQLTSVPAEIGQLTALRELSLAANRLMSVPAEIGQLTSLRELNLNSNQLTNVPAE 115

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L +L+ L +  N++  +P+ +  LTSL VL    N   S+P ++  L  L  L + 
Sbjct: 116 IG-QLTSLEGLRLYGNRLTSVPEEIGQLTSLVVLVLGGNQFTSVPAEIGQLTALRELRLD 174

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L ++P  IG L SL EL +S N++T++P  IG L  L+ L L  N L S P ++
Sbjct: 175 GN--RLTSVPAEIGQLTSLGELSLSGNQLTSVPAEIGQLTLLKGLELYYNQLTSLPAEI 231



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/181 (35%), Positives = 102/181 (56%), Gaps = 3/181 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L + +N+L  +P  IG L+ L+ L+++ N L ++P  I    SLE L    N+L  +P+ 
Sbjct: 79  LSLAANRLMSVPAEIGQLTSLRELNLNSNQLTNVPAEIGQLTSLEGLRLYGNRLTSVPEE 138

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L +L  L +  N+   +P  +  LT+LR L    N L S+P ++  L +L  L++S
Sbjct: 139 IG-QLTSLVVLVLGGNQFTSVPAEIGQLTALRELRLDGNRLTSVPAEIGQLTSLGELSLS 197

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            N   L ++P  IG L  L  L++ YN++T+LP  IG L  L+ L L+ N L S P ++ 
Sbjct: 198 GN--QLTSVPAEIGQLTLLKGLELYYNQLTSLPAEIGQLTSLEHLLLDNNQLTSVPAEIR 255

Query: 196 E 196
           E
Sbjct: 256 E 256



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 111/198 (56%), Gaps = 5/198 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++ VL +  N+L  +P  IG L+ L  L +S N L S+P  I    SL+ L+ + N
Sbjct: 346 GQLTSLEVLYLDHNRLASMPAEIGRLTSLTTLFLSSNRLTSVPAEIGQLTSLKGLHLSRN 405

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  I  +L        +C+   +LP  +  L +LR+L    N L S+P ++  L 
Sbjct: 406 QLTSVPAAI-RDLRAAGCRLEDCDLTGLLPAEIGCLGALRLLQLAGNELTSVPAEIGQLT 464

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +LEVL +S+N   L ++P  IG L SL  L +S N++T+LP  IG L  L++L L+ N L
Sbjct: 465 SLEVLELSRN--KLTSVPVEIGQLTSLERLYLSSNRLTSLPAEIGQLTSLKRLYLDHNQL 522

Query: 188 VSPPMDVVEQGLSAVKGY 205
            S P ++ +  L+A++ +
Sbjct: 523 TSVPAEIGQ--LAALQWF 538



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 96/223 (43%), Gaps = 46/223 (20%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLP-- 73
           L +  NQL  +P  IG L+ LK L++  N L SLP  I    SLE L  + N+L  +P  
Sbjct: 194 LSLSGNQLTSVPAEIGQLTLLKGLELYYNQLTSLPAEIGQLTSLEHLLLDNNQLTSVPAE 253

Query: 74  -------------------------------DTIGFELIN-----------LKTLSINCN 91
                                          D + F LI            L+ L +  N
Sbjct: 254 IRELRAAGCRVDLDDGHWEGVTMENGRVVKLDLVEFGLIGALPAEVGRLSALRWLQLGGN 313

Query: 92  KIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLL 151
            +  +P  +  LTSL       N L S+P ++  L +LEVL +  N   L ++P  IG L
Sbjct: 314 NLTSVPAEIGQLTSLMTFGLSDNKLTSVPAEIGQLTSLEVLYLDHN--RLASMPAEIGRL 371

Query: 152 MSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            SL  L +S N++T++P  IG L  L+ L L  N L S P  +
Sbjct: 372 TSLTTLFLSSNRLTSVPAEIGQLTSLKGLHLSRNQLTSVPAAI 414



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/127 (37%), Positives = 73/127 (57%), Gaps = 3/127 (2%)

Query: 26  LPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKT 85
           LP  IGCL  L++L ++GN L S+P  I    SLE L  + NKL  +P  IG +L +L+ 
Sbjct: 433 LPAEIGCLGALRLLQLAGNELTSVPAEIGQLTSLEVLELSRNKLTSVPVEIG-QLTSLER 491

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L ++ N++  LP  +  LTSL+ L    N L S+P ++  L  L+  ++ +N   L ++P
Sbjct: 492 LYLSSNRLTSLPAEIGQLTSLKRLYLDHNQLTSVPAEIGQLAALQWFDLQRN--ELTSVP 549

Query: 146 YSIGLLM 152
             IG L+
Sbjct: 550 AEIGQLL 556



 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 66/113 (58%), Gaps = 1/113 (0%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +L +  N+L  +P  IG L+ L+VL++S N L S+P  I    SLE L  + N+L  LP 
Sbjct: 445 LLQLAGNELTSVPAEIGQLTSLEVLELSRNKLTSVPVEIGQLTSLERLYLSSNRLTSLPA 504

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            IG +L +LK L ++ N++  +P  +  L +L+  D + N L S+P ++  L+
Sbjct: 505 EIG-QLTSLKRLYLDHNQLTSVPAEIGQLAALQWFDLQRNELTSVPAEIGQLL 556



 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 1/96 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++ VL++  N+L  +P  IG L+ L+ L +S N L SLP  I    SL+ L  + N
Sbjct: 461 GQLTSLEVLELSRNKLTSVPVEIGQLTSLERLYLSSNRLTSLPAEIGQLTSLKRLYLDHN 520

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHL 103
           +L  +P  IG +L  L+   +  N++  +P  +  L
Sbjct: 521 QLTSVPAEIG-QLAALQWFDLQRNELTSVPAEIGQL 555



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 34/59 (57%)

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           ++F     +P  +G L +L +L +  N++T+LP  IG L  L+ L L GN L S P ++
Sbjct: 12  EDFDLTGVVPAELGRLSALRKLSLHGNELTSLPAEIGQLTSLEGLRLFGNQLTSVPAEI 70


>gi|207080310|ref|NP_001128872.1| DKFZP459K227 protein [Pongo abelii]
 gi|55731898|emb|CAH92658.1| hypothetical protein [Pongo abelii]
          Length = 436

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 112/196 (57%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+   L  +  L ++SN+L+ LP  +GCL  L  L +S N L SLP +++N + L 
Sbjct: 114 ILPSSIKV-LTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLR 172

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKLR++P  + + L +L TL +  N+I  + + + +L+ L +L  R N +K LP
Sbjct: 173 MLDLRHNKLREIPSVV-YRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLP 231

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG    +  LD+ +N++  LPD+IG L  L +L
Sbjct: 232 AEIGELCNLITLDVAHN--QLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRL 289

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N L + P  + +
Sbjct: 290 GLRYNRLSAIPRSLAK 305



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 102/185 (55%), Gaps = 12/185 (6%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  +  L+   N+L  LPD
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEVLN 133
           TIG  L +L  L +  N++  +P+SL   ++L  L+   N + +LPE  L +L+ L  L 
Sbjct: 279 TIG-NLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLT 337

Query: 134 ISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNPLV 188
           +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N L 
Sbjct: 338 LARNCFQL-----YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLT 392

Query: 189 SPPMD 193
           S P+D
Sbjct: 393 SLPLD 397



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 29/51 (56%)

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           +  LP SI +L  L EL +  NK+ +LP  +GCL  L  L+L  N L S P
Sbjct: 112 IHILPSSIKVLTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162


>gi|456822986|gb|EMF71456.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 423

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/227 (37%), Positives = 126/227 (55%), Gaps = 11/227 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL +++NQL  LP  I  L  L++LD+  N L  LPK I   ++L+EL  ++N
Sbjct: 112 GQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYN 171

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ LS+  +++ ILPQ +  L +L  LD   N L  LP+++  L 
Sbjct: 172 QLTTLPKEIG-KLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQ 230

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+   +  N   L  LP  IG L +L EL + +N++T LP  IG L+ LQ+  L+ N  
Sbjct: 231 NLQRFVLDNN--QLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQF 288

Query: 188 VSPPMDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFN 233
              P ++ + Q L  +  YLS   N     PK+   +GKL K  T N
Sbjct: 289 TILPKEIGQLQNLQEL--YLS--YNQLTTFPKE---IGKLQKLQTLN 328



 Score =  103 bits (257), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 112/186 (60%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ +LD+  NQL  LP  IG L  L++L +  N L +LPK I   ++L+ L  N N+
Sbjct: 67  QLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQ 126

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  I  +L NL+ L +  N++ ILP+ +  L +L+ L    N L +LP+++  L N
Sbjct: 127 LTTLPTEIR-QLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIGKLEN 185

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L++L++ ++   L  LP  IG L +L ELD+S+N++T LP  IG L+ LQ+  L+ N L 
Sbjct: 186 LQLLSLYES--QLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLT 243

Query: 189 SPPMDV 194
             P ++
Sbjct: 244 ILPKEI 249



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/227 (33%), Positives = 116/227 (51%), Gaps = 25/227 (11%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +  +L N+  LD+  NQL  LP  IG L  L+   +  N L  LPK I   ++L 
Sbjct: 198 ILPQEI-GKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLH 256

Query: 61  ELNANFNKLRQLPDTIGF----------------------ELINLKTLSINCNKIVILPQ 98
           EL    N+L  LP  IG                       +L NL+ L ++ N++   P+
Sbjct: 257 ELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPK 316

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
            +  L  L+ L+   N L +LPE++E L NL+ LN+S+N   L+T+P  IG L +L  LD
Sbjct: 317 EIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSEN--QLKTIPQEIGQLQNLKSLD 374

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGY 205
           +S N++TTLP  I  L+ LQ L+L  N   S   + + + L   + Y
Sbjct: 375 LSNNQLTTLPKEIEQLKNLQTLNLWNNQFSSQEKEKIRKLLPKCQIY 421



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 105/187 (56%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  NQL  LP  IG L  L++L +  + L  LP+ I   ++L EL+ + N
Sbjct: 158 GQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHN 217

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+   ++ N++ ILP+ +  L +L  L    N L  LP+++  L 
Sbjct: 218 QLTILPKEIG-QLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQ 276

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+   +  N      LP  IG L +L EL +SYN++TT P  IG L+KLQ L+L  N L
Sbjct: 277 NLQRFVLDNN--QFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQL 334

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 335 TTLPEEI 341



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVL      L +LP++++ L NL++L++  N   L  LP  IG L +L 
Sbjct: 38  LTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHN--QLTALPKEIGQLKNLQ 95

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L + YN++T LP  IG L+ L+ L L  N L + P ++
Sbjct: 96  LLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEI 134


>gi|348578841|ref|XP_003475190.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat protein
           SHOC-2-like [Cavia porcellus]
          Length = 584

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 113/196 (57%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+   L  +  L ++SN+L+ LP  +GCL  L  L +S N L SLP +++N + L 
Sbjct: 114 ILPSSI-KELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLR 172

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKLR++P  + + L +L TL +  N+I  + + + +L+ L +L  R N +K LP
Sbjct: 173 MLDLRHNKLREIPSVV-YRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLP 231

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++ +L NL  L+++ N   LE LP  IG    +  LD+ +N++  LPD+IG L  L +L
Sbjct: 232 AEIGDLCNLITLDVAHN--QLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRL 289

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N L + P  + +
Sbjct: 290 GLRYNRLSAIPRSLAK 305



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 102/185 (55%), Gaps = 12/185 (6%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  +  L+   N+L  LPD
Sbjct: 219 MLSIRENKIKQLPAEIGDLCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEVLN 133
           TIG  L +L  L +  N++  +P+SL   ++L  L+   N + +LPE  L +L+ L  L 
Sbjct: 279 TIG-NLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLT 337

Query: 134 ISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNPLV 188
           +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N L 
Sbjct: 338 LARNCFQL-----YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLT 392

Query: 189 SPPMD 193
           S P+D
Sbjct: 393 SLPLD 397



 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 90/177 (50%), Gaps = 6/177 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 357 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  L +L  LR LD   N     P ++  L +L
Sbjct: 415 TKIPEDVSG-LVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENXFDHCPNEIAYLKDL 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           +   +      L TLP  IG L +L  L +  N +T LP+ IG L  L++L L  NP
Sbjct: 474 QXNKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNP 530



 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L ++   I ILP S+  LT L  L    N L+SLP ++  L+NL  L +S+N   L +LP
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLP 162

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            S+  L  L  LD+ +NK+  +P  +  L  L  L L  N + +   D+
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 211


>gi|255080390|ref|XP_002503775.1| predicted protein [Micromonas sp. RCC299]
 gi|226519042|gb|ACO65033.1| predicted protein [Micromonas sp. RCC299]
          Length = 406

 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 106/187 (56%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++ VL++H NQL  +P  IG L+ LK L++ GN L SLP  I    SL  L  + N
Sbjct: 181 GQLTSLEVLELHYNQLTSVPAEIGQLASLKWLNLHGNQLTSLPAGIGQLTSLTYLFLDDN 240

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L +L+ L +  N++  LP  +  L SL  L    N L SLP  +  L 
Sbjct: 241 RLTSLPAEIG-QLTSLERLYLRHNQLTSLPAEIGQLASLEWLYLEGNQLTSLPAGIGQLT 299

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  L +++N   L +LP  IG L SL  L ++YN++T++P  IG L  L++L L  N L
Sbjct: 300 SLTYLYLNEN--QLTSLPAEIGQLTSLKALGLNYNQLTSVPAEIGQLAALRELGLFENQL 357

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 358 TSVPAEI 364



 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 71/179 (39%), Positives = 100/179 (55%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L V  NQ   +P  IG L+ L+VL++  N L S+P  I    SL+ LN + N+L  LP  
Sbjct: 166 LGVSGNQRTSVPAEIGQLTSLEVLELHYNQLTSVPAEIGQLASLKWLNLHGNQLTSLPAG 225

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L +L  L ++ N++  LP  +  LTSL  L  R N L SLP ++  L +LE L + 
Sbjct: 226 IG-QLTSLTYLFLDDNRLTSLPAEIGQLTSLERLYLRHNQLTSLPAEIGQLASLEWLYLE 284

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L +LP  IG L SL  L ++ N++T+LP  IG L  L+ L L  N L S P ++
Sbjct: 285 GN--QLTSLPAGIGQLTSLTYLYLNENQLTSLPAEIGQLTSLKALGLNYNQLTSVPAEI 341



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 103/187 (55%), Gaps = 7/187 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++V L +  NQL  LP  IG L  L  L ++GN L SLP  I    SLE L  N N
Sbjct: 47  GQLPSLVKLSLRHNQLTSLPAEIGQLPSLTRLWLAGNQLTSLPAEIGQLMSLEGLFLNGN 106

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  I ++L +L+ L++  N++  +P+ +  LTSLR L    N L S+      L 
Sbjct: 107 QLTSVPAEI-WQLTSLRALNLYGNQLTSVPEEIGQLTSLRRLFLSGNQLTSIGL----LS 161

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L  L +S N +   ++P  IG L SL  L++ YN++T++P  IG L  L+ L+L GN L
Sbjct: 162 ALRGLGVSGNQRT--SVPAEIGQLTSLEVLELHYNQLTSVPAEIGQLASLKWLNLHGNQL 219

Query: 188 VSPPMDV 194
            S P  +
Sbjct: 220 TSLPAGI 226



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 83/153 (54%), Gaps = 9/153 (5%)

Query: 52  TIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDA 111
           TIEN R +E    +      +P  +G +L +L  LS+  N++  LP  +  L SL  L  
Sbjct: 22  TIENGRVVELDLEDVGLTGAVPAEVG-QLPSLVKLSLRHNQLTSLPAEIGQLPSLTRLWL 80

Query: 112 RLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
             N L SLP ++  L++LE L ++ N   L ++P  I  L SL  L++  N++T++P+ I
Sbjct: 81  AGNQLTSLPAEIGQLMSLEGLFLNGN--QLTSVPAEIWQLTSLRALNLYGNQLTSVPEEI 138

Query: 172 GCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKG 204
           G L  L++L L GN L S  +      LSA++G
Sbjct: 139 GQLTSLRRLFLSGNQLTSIGL------LSALRG 165



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 1/96 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++  L ++ NQL  LP  IG L+ LK L ++ N L S+P  I    +L EL    N
Sbjct: 296 GQLTSLTYLYLNENQLTSLPAEIGQLTSLKALGLNYNQLTSVPAEIGQLAALRELGLFEN 355

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHL 103
           +L  +P  IG +L  L+ L +  N++   P ++  L
Sbjct: 356 QLTSVPAEIG-QLTLLEGLELRHNRLTSEPAAIREL 390


>gi|197100985|ref|NP_001126707.1| leucine-rich repeat protein SHOC-2 [Pongo abelii]
 gi|55732408|emb|CAH92905.1| hypothetical protein [Pongo abelii]
          Length = 582

 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 112/196 (57%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+   L  +  L ++SN+L+ LP  +GCL  L  L +S N L SLP +++N + L 
Sbjct: 114 ILPSSI-KELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENALTSLPDSLDNLKKLR 172

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKLR++P  + + L +L TL +  N+I  + + + +L+ L +L  R N +K LP
Sbjct: 173 MLDLRHNKLREIPSVV-YRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLP 231

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG    +  LD+ +N++  LPD+IG L  L +L
Sbjct: 232 AEIGELCNLITLDVAHN--QLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRL 289

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N L + P  + +
Sbjct: 290 GLRYNRLSAIPRSLAK 305



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 102/185 (55%), Gaps = 12/185 (6%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  +  L+   N+L  LPD
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEVLN 133
           TIG  L +L  L +  N++  +P+SL   ++L  L+   N + +LPE  L +L+ L  L 
Sbjct: 279 TIG-NLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLT 337

Query: 134 ISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNPLV 188
           +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N L 
Sbjct: 338 LARNCFQL-----YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLT 392

Query: 189 SPPMD 193
           S P+D
Sbjct: 393 SLPLD 397



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 2/160 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           ++V L++ +NQL  +P  +  L  L+VL +S NLL+ LP  + N R L EL+   NKL  
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ I + L +L+ L +  N++  LP+ + HLT+L  L    N L  LPE++  L NLE 
Sbjct: 463 LPNEIAY-LKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEE 521

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           L ++ N   L +LP+ + L   L  + +    ++ LP  I
Sbjct: 522 LYLNDN-PNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 560



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 8/177 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 357 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  L +L  LR LD   N L+SLP ++  L +L
Sbjct: 415 TKIPEDVSG-LVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           + L ++ N   L TLP  IG L +L  L +  N +T LP+ IG L  L++L L  NP
Sbjct: 474 QKLVLTNN--QLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNP 528



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N+L  LP++IG LS L  L +  N L ++P+++  C +LEELN   N +  L
Sbjct: 263 ITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTL 322

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+++   L+ L +L++  NC                                        
Sbjct: 323 PESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLS 382

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N L  +PED+  L++LEVL +S N   L+ L
Sbjct: 383 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKL 440

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ +G L  L ELD+  NK+ +LP+ I  L+ LQKL L  N L + P  +
Sbjct: 441 PHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 97/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +PESL + L+ +  L +  N  +  P       S +  L++  N +  +P  I    + L
Sbjct: 322 LPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL 381

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP   G    ++  L++  N++  +P+ ++ L SL VL    N LK L
Sbjct: 382 SKLNMKDNQLTSLPLDFG-TWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  L NL  L  L++ +N   LE+LP  I  L  L +L ++ N++TTLP  IG L  L  
Sbjct: 441 PHGLGNLRKLRELDLEEN--KLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTH 498

Query: 180 LSLEGNPLVSPPMDV 194
           L L  N L   P ++
Sbjct: 499 LGLGENLLTHLPEEI 513



 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L ++   I ILP S+  LT L  L    N L+SLP ++  L+NL  L +S+N   L +LP
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--ALTSLP 162

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            S+  L  L  LD+ +NK+  +P  +  L  L  L L  N + +   D+
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 211


>gi|455791544|gb|EMF43351.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 356

 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/184 (38%), Positives = 112/184 (60%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++ S +L  LP  I  L  LK LD++ N  ++LPK I   ++L+ELN   N+L+
Sbjct: 48  LDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLK 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG +L +L+TL ++ N++   PQ +  L +L+ L+   N L +L +++  L +L+
Sbjct: 108 NLPKEIG-QLQSLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+ +N   L+ LP  IG L +L EL +S N++T LP+ IG L+ LQ L L  N L   
Sbjct: 167 KLNLDKN--RLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTIL 224

Query: 191 PMDV 194
           P ++
Sbjct: 225 PKEI 228



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 106/186 (56%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  LD+ +NQ K LP  IG L  L+ L++  N L++LPK I   +SL+ L  + N+
Sbjct: 69  QLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQSLQTLILSVNR 128

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L   P  IG +L NL+ L+++ N++  L Q +  L SL+ L+   N LK+LP ++  L N
Sbjct: 129 LTTFPQEIG-QLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQN 187

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S N   L  LP  IG L +L  L +  N++T LP  IG L+ L+ L    N L 
Sbjct: 188 LQELYLSNN--QLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELT 245

Query: 189 SPPMDV 194
             P ++
Sbjct: 246 ILPQEI 251



 Score = 94.4 bits (233), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 125/221 (56%), Gaps = 10/221 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  NQL  L   IG L  L+ L++  N L++LP  I   ++L+EL  + N
Sbjct: 137 GQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNN 196

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+ L +  N++ ILP+ +  L +L++L +  N L  LP+++  L 
Sbjct: 197 QLTILPEEIG-QLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQ 255

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L +S N   L TLP  IG L +L EL ++ N++TTLP  IG L+ LQ      N L
Sbjct: 256 KLQYLYLSHN--QLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQL 313

Query: 188 VSPPMDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
              P ++ + Q L  +      K+NN+  S +++  + KL+
Sbjct: 314 TMLPNEIGQLQNLQWL------KLNNNQLSFQEEERIRKLL 348



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 107/184 (58%), Gaps = 5/184 (2%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L  ++L V  N+L   P  IG L  L+ L++  N L +L + I   +SL++LN + N+L+
Sbjct: 119 LQTLILSV--NRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLK 176

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ IG +L NL+ L ++ N++ ILP+ +  L +L+ L    N L  LP+++  L NL+
Sbjct: 177 ALPNEIG-QLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLK 235

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
           +L    N   L  LP  IG L  L  L +S+N++TTLP  IG L  LQ+L L  N L + 
Sbjct: 236 LLYSVNN--ELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTL 293

Query: 191 PMDV 194
           P ++
Sbjct: 294 PKEI 297



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++PE +  +L N+  L +  NQL  LP  IG L  LK+L    N L  LP+ I   + L+
Sbjct: 200 ILPEEI-GQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQ 258

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L  + N+L  LP  IG +L NL+ L +N N++  LP+ +  L +L+   +  N L  LP
Sbjct: 259 YLYLSHNQLTTLPKEIG-QLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLP 317

Query: 121 EDLENLINLEVLNISQN 137
            ++  L NL+ L ++ N
Sbjct: 318 NEIGQLQNLQWLKLNNN 334



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVL+     L +LP++++ L NL+ L+++ N    +TLP  IG L +L 
Sbjct: 40  LTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANN--QFKTLPKEIGQLQNLQ 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           EL++  N++  LP  IG L+ LQ L L  N L + P ++
Sbjct: 98  ELNLWNNQLKNLPKEIGQLQSLQTLILSVNRLTTFPQEI 136


>gi|418728103|ref|ZP_13286683.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410777148|gb|EKR57116.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 447

 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +LD+  NQL  LP  I  L  L++LD+S N L  LPK I   ++L+ L+   N
Sbjct: 67  GQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSN 126

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L ++ N++   P+ +  L  L+ L+   N +K++P+++E L 
Sbjct: 127 QLTILPKEIG-KLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQ 185

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L +  N   L TLP  IG L  L  L++SYN+I TLP  I  L+KLQ L L  N L
Sbjct: 186 KLQSLYLPNN--QLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQL 243

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 244 TTLPQEI 250



 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 75/214 (35%), Positives = 119/214 (55%), Gaps = 23/214 (10%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L  +  L++  NQ+K LP  I  L KL+ L +  N L +LP+ IE  + LE 
Sbjct: 200 LPQEI-GKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLES 258

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+L  LP  IG +L NLK L +N N++  +PQ + HL +L+ L    N L ++P+
Sbjct: 259 LGLDNNQLTTLPQEIG-QLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPK 317

Query: 122 DLENLINLEVLNIS--------------QNFQ-------YLETLPYSIGLLMSLVELDVS 160
           ++  L NL++L++               QN Q        L T+P  IG L +L EL +S
Sbjct: 318 EIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLS 377

Query: 161 YNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N++TT+P  IG L+ LQ+L L  N L++ P ++
Sbjct: 378 NNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEI 411



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 107/186 (57%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ +LD+ SNQL  LP  IG L  L+ L +S N L + PK I   + L+ LN + N+
Sbjct: 114 QLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQ 173

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           ++ +P  I  +L  L++L +  N++  LPQ +  L  L+ L+   N +K+LP+++E L  
Sbjct: 174 IKTIPKEIE-KLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQK 232

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L + +N   L TLP  I  L  L  L +  N++TTLP  IG L+ L+ L L  N L 
Sbjct: 233 LQWLYLHKN--QLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLT 290

Query: 189 SPPMDV 194
           + P ++
Sbjct: 291 TIPQEI 296



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/170 (38%), Positives = 102/170 (60%), Gaps = 3/170 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L + +NQL  LP  IG L  LKVL ++ N L ++P+ I + ++L++L    N+L  +P  
Sbjct: 259 LGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKE 318

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL+ L +  N++ ILP+ +  L +L+ L    N L ++P+++  L NL+ L +S
Sbjct: 319 IG-QLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLS 377

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            N   L T+P  IG L +L EL +S N++ T+P  IG L+ LQ L L  N
Sbjct: 378 NN--QLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNN 425



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 79/136 (58%), Gaps = 2/136 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +   L N+  L + SNQL  +P  IG L  L++LD+  N L  LPK I   ++L+E
Sbjct: 292 IPQEI-GHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQE 350

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+L  +P  IG +L NL+ L ++ N++  +P+ +  L +L+ L    N L ++P+
Sbjct: 351 LYLSNNQLTTIPKEIG-QLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPK 409

Query: 122 DLENLINLEVLNISQN 137
           ++  L NL+ L +  N
Sbjct: 410 EIGQLQNLQTLYLRNN 425



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 74/140 (52%), Gaps = 12/140 (8%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVLD     LK+LP+ +  L NL++L++S N   L  LP  I  L +L 
Sbjct: 39  LTKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDN--QLIILPKEIRQLKNLQ 96

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGLSAVKGYLSEKMNNDH 214
            LD+S N++  LP  I  L+ LQ L L  N L   P ++ + Q L  +  YLS   NN  
Sbjct: 97  MLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQEL--YLS---NNQL 151

Query: 215 KS-PKKKSWVGKLVKYGTFN 233
            + PK+   +GKL K    N
Sbjct: 152 TTFPKE---IGKLQKLQWLN 168


>gi|363736689|ref|XP_003641743.1| PREDICTED: leucine-rich repeat-containing protein 7 [Gallus gallus]
          Length = 1455

 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/184 (38%), Positives = 108/184 (58%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP SIG L +L  LD+S N +E++   I  C  LE+
Sbjct: 199 LPEVL-EQIQNLKELWMDNNSLQILPGSIGKLKQLVYLDMSKNRIETVDLDISGCEGLED 257

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+QLPD+IG  L  L TL ++ N++ ILP ++ +L+ L   D   N L+SLP 
Sbjct: 258 LLLSSNMLQQLPDSIGL-LKRLTTLKVDDNQLTILPNAIGNLSLLEEFDCSCNELESLPS 316

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L NL  L + +NF  L  LP  IG   ++  + +  NK+  LPD IG ++KL+ L+
Sbjct: 317 TIGYLHNLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPDEIGQMQKLRVLN 374

Query: 182 LEGN 185
           L  N
Sbjct: 375 LSDN 378



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/233 (32%), Positives = 108/233 (46%), Gaps = 50/233 (21%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP +I  L  L+ LD+S N ++  P+ I+ C+ L 
Sbjct: 59  EELPKQLFNCQALRKLSIPDNDLSSLPTTIASLVNLRELDISKNGIQDFPENIKCCKCLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   L  LR+L+ R N LK+L
Sbjct: 119 IIEASVNPVSKLPD--GFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTL 176

Query: 120 PEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELD 158
           P+ +  L  LE L++  N                        L+ LP SIG L  LV LD
Sbjct: 177 PKSMHKLTQLERLDLGNNEFSELPEVLEQIQNLKELWMDNNSLQILPGSIGKLKQLVYLD 236

Query: 159 VSYNKITT-----------------------LPDSIGCLRKLQKLSLEGNPLV 188
           +S N+I T                       LPDSIG L++L  L ++ N L 
Sbjct: 237 MSKNRIETVDLDISGCEGLEDLLLSSNMLQQLPDSIGLLKRLTTLKVDDNQLT 289



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 109/193 (56%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +LLN+  L ++   L+ LP + G L KL++L++  N L++LPK++     LE 
Sbjct: 130 LPDGFT-QLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLTQLER 188

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+  +LP+ +  ++ NLK L ++ N + ILP S+  L  L  LD   N ++++  
Sbjct: 189 LDLGNNEFSELPEVLE-QIQNLKELWMDNNSLQILPGSIGKLKQLVYLDMSKNRIETVDL 247

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           D+     LE L +S N   L+ LP SIGLL  L  L V  N++T LP++IG L  L++  
Sbjct: 248 DISGCEGLEDLLLSSNM--LQQLPDSIGLLKRLTTLKVDDNQLTILPNAIGNLSLLEEFD 305

Query: 182 LEGNPLVSPPMDV 194
              N L S P  +
Sbjct: 306 CSCNELESLPSTI 318



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 54/137 (39%), Positives = 72/137 (52%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +P+S+   L  +  L V  NQL  LPN+IG LS L+  D S N LESLP TI    +L 
Sbjct: 267 QLPDSI-GLLKRLTTLKVDDNQLTILPNAIGNLSLLEEFDCSCNELESLPSTIGYLHNLR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L  + N L +LP  IG    N+  +S+  NK+  LP  +  +  LRVL+   N LK+LP
Sbjct: 326 TLAVDENFLPELPREIG-SCKNVTVMSLRSNKLEFLPDEIGQMQKLRVLNLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  L +S N
Sbjct: 385 FTFTKLKELAALWLSDN 401



 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 62/115 (53%), Gaps = 4/115 (3%)

Query: 69  LRQLP-DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P +   FE   L+ L ++ N+I  LP+ L +  +LR L    N L SLP  + +L+
Sbjct: 34  LQQVPKEVFNFERT-LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTTIASLV 92

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           NL  L+IS+N   ++  P +I     L  ++ S N ++ LPD    L  L +L L
Sbjct: 93  NLRELDISKNG--IQDFPENIKCCKCLTIIEASVNPVSKLPDGFTQLLNLTQLYL 145



 Score = 43.9 bits (102), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 39/61 (63%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP+ IG + KL+VL++S N L++LP T    + L  L  + N+ + 
Sbjct: 346 NVTVMSLRSNKLEFLPDEIGQMQKLRVLNLSDNRLKNLPFTFTKLKELAALWLSDNQSKA 405

Query: 72  L 72
           L
Sbjct: 406 L 406



 Score = 40.4 bits (93), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 50/111 (45%), Gaps = 10/111 (9%)

Query: 5   SLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNA 64
           S    L N+  L V  N L  LP  IG    + V+ +  N LE LP  I   + L  LN 
Sbjct: 316 STIGYLHNLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPDEIGQMQKLRVLNL 375

Query: 65  NFNKLRQLPDTIGFELINLKT-----LSINCNKIVILPQSLTHL-TSLRVL 109
           + N+L+ LP    F    LK      LS N +K +I  Q+  H  T  RVL
Sbjct: 376 SDNRLKNLP----FTFTKLKELAALWLSDNQSKALIPLQTEAHPETKQRVL 422


>gi|326925538|ref|XP_003208970.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Meleagris gallopavo]
          Length = 735

 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 122/227 (53%), Gaps = 29/227 (12%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP S  A L+N+V L++  NQLK LP  I  +  LK LD + N LE++P  + +  SLE+
Sbjct: 321 IPTSF-ALLINLVRLNLACNQLKNLPADISAMKSLKQLDCTKNYLETVPSELASMASLEQ 379

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVIL-PQSLTHLTSLRVLDARLNCLKSLP 120
           L    NKLR LP+    +L  LK L    N+I IL  ++L HL SL VL+ R N +KS+P
Sbjct: 380 LYLRKNKLRSLPELPSCKL--LKELHAGENQIEILNAENLKHLNSLSVLELRDNKIKSVP 437

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           ++                         I LL  L  LD++ N I+ LP ++G L +L+ L
Sbjct: 438 DE-------------------------ITLLQKLERLDLANNDISRLPYTLGNLSQLKFL 472

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
           +LEGNPL +   D++++G   +  YL  ++ +D  SP ++  V  + 
Sbjct: 473 ALEGNPLRAIRRDLLQKGTQELLKYLRSRIQDDTASPNEEPPVTAMT 519



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/172 (36%), Positives = 94/172 (54%), Gaps = 3/172 (1%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SNQL+CL   +  L  L VLDV  N L SLP  +    +L++L+ + NKL+ +P+ +  +
Sbjct: 223 SNQLQCLSEDVRLLPALSVLDVHDNQLTSLPSALGQLENLQKLDVSHNKLKSIPEEL-LQ 281

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +LK+L +  N++  LP     L SL  LD   N L  +P     LINL  LN++ N  
Sbjct: 282 LSHLKSLLLQHNELSHLPDGFGQLVSLEELDLSNNHLTDIPTSFALLINLVRLNLACN-- 339

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            L+ LP  I  + SL +LD + N + T+P  +  +  L++L L  N L S P
Sbjct: 340 QLKNLPADISAMKSLKQLDCTKNYLETVPSELASMASLEQLYLRKNKLRSLP 391



 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 81/164 (49%), Gaps = 8/164 (4%)

Query: 50  PKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLS---INCNKIVILPQSLTHLTSL 106
           P+ +E   S+ ++N  FNK+     ++  EL  L  L+   I  N +  LP+ +  LT L
Sbjct: 575 PRIVELKDSVCDVNFGFNKI----SSVSLELCTLHKLTHLDIRNNVLTSLPEEMEALTRL 630

Query: 107 RVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITT 166
           +V++   N  K  P  L  ++ LE + +S N Q     P  +  +  L  LD+  N +  
Sbjct: 631 QVINLSFNRFKVFPSVLYRILTLETILLSNN-QVGSVDPLQLKKMEQLGTLDLQNNDLLQ 689

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKM 210
           +P  +G    L+ L LEGNP  +P   ++ +G +AV  YL  ++
Sbjct: 690 VPPELGNCETLRTLLLEGNPFRTPRAAILAKGTAAVLEYLRSRI 733



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 71/154 (46%), Gaps = 25/154 (16%)

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
           +E  +L  L +  N++  L + +  L +L VLD   N L SLP  L  L NL+ L++S N
Sbjct: 211 WEQTDLTKLILASNQLQCLSEDVRLLPALSVLDVHDNQLTSLPSALGQLENLQKLDVSHN 270

Query: 138 -------------------FQY--LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
                               Q+  L  LP   G L+SL ELD+S N +T +P S   L  
Sbjct: 271 KLKSIPEELLQLSHLKSLLLQHNELSHLPDGFGQLVSLEELDLSNNHLTDIPTSFALLIN 330

Query: 177 LQKLSLEGNPLVSPPMDVVE----QGLSAVKGYL 206
           L +L+L  N L + P D+      + L   K YL
Sbjct: 331 LVRLNLACNQLKNLPADISAMKSLKQLDCTKNYL 364



 Score = 44.3 bits (103), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 2/106 (1%)

Query: 33  LSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNK 92
           L KL  LD+  N+L SLP+ +E    L+ +N +FN+ +  P  + + ++ L+T+ ++ N+
Sbjct: 604 LHKLTHLDIRNNVLTSLPEEMEALTRLQVINLSFNRFKVFPSVL-YRILTLETILLSNNQ 662

Query: 93  I-VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
           +  + P  L  +  L  LD + N L  +P +L N   L  L +  N
Sbjct: 663 VGSVDPLQLKKMEQLGTLDLQNNDLLQVPPELGNCETLRTLLLEGN 708


>gi|427720310|ref|YP_007068304.1| adenylate cyclase [Calothrix sp. PCC 7507]
 gi|427352746|gb|AFY35470.1| Adenylate cyclase [Calothrix sp. PCC 7507]
          Length = 317

 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++ +LD+ SNQL  LP  IG LS L++L +  N L SLP+ IE   +L  L+   N
Sbjct: 119 GQLSHLQLLDIRSNQLSSLPREIGQLSHLQLLYLRSNQLSSLPREIEQLTNLRSLDLGDN 178

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL++L +  N+++ LP  +  L+ L  L+   N L +LP ++  L 
Sbjct: 179 QLSSLPREIG-QLFNLQSLYLYKNRLIDLPSEIGQLSHLESLNLGDNQLSNLPREIGQLS 237

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L + +N   L +LP     L +L  LD+S+N++++LP  IG L  LQ L L  N L
Sbjct: 238 NLRSLGLGEN--QLSSLPNEFTQLTNLQRLDLSFNQLSSLPKKIGQLTNLQWLILHNNQL 295

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 296 SSLPSEI 302



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/196 (36%), Positives = 105/196 (53%), Gaps = 17/196 (8%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLK--------------VLDVSGNLLESLPKTIENCRS 58
           V  LD+  N L  LP  IG L++LK              ++D+ GN L +LPK +     
Sbjct: 18  VTELDLSGNNLTALPPEIGKLTQLKKLILGKYQYDQEGYIVDIIGNNLSALPKELGLLNQ 77

Query: 59  LEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKS 118
           LEEL    N L  LP  IG +L NL+T  +  N++  LP+ +  L+ L++LD R N L S
Sbjct: 78  LEELLVLANHLTTLPSAIG-QLTNLQTFVLKYNQLSSLPREIGQLSHLQLLDIRSNQLSS 136

Query: 119 LPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQ 178
           LP ++  L +L++L +  N   L +LP  I  L +L  LD+  N++++LP  IG L  LQ
Sbjct: 137 LPREIGQLSHLQLLYLRSN--QLSSLPREIEQLTNLRSLDLGDNQLSSLPREIGQLFNLQ 194

Query: 179 KLSLEGNPLVSPPMDV 194
            L L  N L+  P ++
Sbjct: 195 SLYLYKNRLIDLPSEI 210



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/180 (35%), Positives = 100/180 (55%), Gaps = 3/180 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           ++D+  N L  LP  +G L++L+ L V  N L +LP  I    +L+     +N+L  LP 
Sbjct: 57  IVDIIGNNLSALPKELGLLNQLEELLVLANHLTTLPSAIGQLTNLQTFVLKYNQLSSLPR 116

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            IG +L +L+ L I  N++  LP+ +  L+ L++L  R N L SLP ++E L NL  L++
Sbjct: 117 EIG-QLSHLQLLDIRSNQLSSLPREIGQLSHLQLLYLRSNQLSSLPREIEQLTNLRSLDL 175

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N   L +LP  IG L +L  L +  N++  LP  IG L  L+ L+L  N L + P ++
Sbjct: 176 GDN--QLSSLPREIGQLFNLQSLYLYKNRLIDLPSEIGQLSHLESLNLGDNQLSNLPREI 233



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 73/128 (57%), Gaps = 1/128 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L ++ N+L  LP+ IG LS L+ L++  N L +LP+ I    +L  L    N
Sbjct: 188 GQLFNLQSLYLYKNRLIDLPSEIGQLSHLESLNLGDNQLSNLPREIGQLSNLRSLGLGEN 247

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+    +L NL+ L ++ N++  LP+ +  LT+L+ L    N L SLP ++  L 
Sbjct: 248 QLSSLPNEF-TQLTNLQRLDLSFNQLSSLPKKIGQLTNLQWLILHNNQLSSLPSEIGQLT 306

Query: 128 NLEVLNIS 135
           NL  L+++
Sbjct: 307 NLRSLDLA 314


>gi|418701961|ref|ZP_13262879.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759093|gb|EKR25312.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 267

 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 105/178 (58%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD++ NQL  LP  IG L KL+VL+++GN   SLPK I   ++LE L+   N
Sbjct: 60  GQLQNLERLDLNGNQLASLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGN 119

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP  IG +L  L+ L+++ N+  I P+ +    SL+ L    + LK+LP+++  L 
Sbjct: 120 QFTSLPKEIG-QLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQ 178

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ L++  N   L +LP  IG L +L EL++  NK+ TLP  I  L+ LQ L L  N
Sbjct: 179 NLQSLHLDGN--QLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSN 234



 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/183 (38%), Positives = 101/183 (55%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L++  NQL  LP  IG L  L+VL+++GN   SLPK I   ++LE L+ N N+L  
Sbjct: 18  NLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLNGNQLAS 77

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L  L+ L++  N+   LP+ +  L +L  LD   N   SLP+++  L  LE 
Sbjct: 78  LPKEIG-QLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEA 136

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LN+  N       P  I    SL  L +S +++ TLP  I  L+ LQ L L+GN L S P
Sbjct: 137 LNLDHN--RFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLTSLP 194

Query: 192 MDV 194
            ++
Sbjct: 195 KEI 197



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 98/175 (56%), Gaps = 3/175 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           ++L+ LP  IG    L+ L++ GN L SLPK I   ++L  LN   N+   LP  IG +L
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG-QL 62

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            NL+ L +N N++  LP+ +  L  LRVL+   N   SLP+++  L NLE L+++ N   
Sbjct: 63  QNLERLDLNGNQLASLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGN--Q 120

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
             +LP  IG L  L  L++ +N+ T  P  I   + L+ L L G+ L + P +++
Sbjct: 121 FTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEIL 175



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 2/82 (2%)

Query: 113 LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
           L+ L+SLP  +    NLE LN+  N   L +LP  IG L +L  L+++ N+ T+LP  IG
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGN--QLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60

Query: 173 CLRKLQKLSLEGNPLVSPPMDV 194
            L+ L++L L GN L S P ++
Sbjct: 61  QLQNLERLDLNGNQLASLPKEI 82


>gi|418727710|ref|ZP_13286298.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409959068|gb|EKO22845.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 423

 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/227 (37%), Positives = 126/227 (55%), Gaps = 11/227 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL +++NQL  LP  I  L  L++LD+  N L  LPK I   ++L+EL  ++N
Sbjct: 112 GQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYN 171

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ LS+  +++ ILPQ +  L +L  LD   N L  LP+++  L 
Sbjct: 172 QLTTLPKEIG-KLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQ 230

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+   +  N   L  LP  IG L +L EL + +N++T LP  IG L+ LQ+  L+ N  
Sbjct: 231 NLQRFVLDNN--QLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQF 288

Query: 188 VSPPMDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFN 233
              P ++ + Q L  +  YLS   N     PK+   +GKL K  T N
Sbjct: 289 TILPKEIGQLQNLQEL--YLS--YNQLTTFPKE---IGKLQKLQTLN 328



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 112/186 (60%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ +LD+  NQL  LP  IG L  L++L +  N L +LPK I   ++L+ L  N N+
Sbjct: 67  QLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQ 126

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  I  +L NL+ L +  N++ ILP+ +  L +L+ L    N L +LP+++  L N
Sbjct: 127 LTTLPTEIR-QLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIGKLEN 185

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L++L++ ++   L  LP  IG L +L ELD+S+N++T LP  IG L+ LQ+  L+ N L 
Sbjct: 186 LQLLSLYES--QLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLT 243

Query: 189 SPPMDV 194
             P ++
Sbjct: 244 ILPKEI 249



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 76/227 (33%), Positives = 116/227 (51%), Gaps = 25/227 (11%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +  +L N+  LD+  NQL  LP  IG L  L+   +  N L  LPK I   ++L 
Sbjct: 198 ILPQEI-GKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLH 256

Query: 61  ELNANFNKLRQLPDTIGF----------------------ELINLKTLSINCNKIVILPQ 98
           EL    N+L  LP  IG                       +L NL+ L ++ N++   P+
Sbjct: 257 ELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPK 316

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
            +  L  L+ L+   N L +LPE++E L NL+ LN+S+N   L+T+P  IG L +L  LD
Sbjct: 317 EIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSEN--QLKTIPQEIGQLQNLKLLD 374

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGY 205
           +S N++TTLP  I  L+ LQ L+L  N   S   + + + L   + Y
Sbjct: 375 LSNNQLTTLPKEIEQLKNLQTLNLWNNQFSSQEKEKIRKLLPKCQIY 421



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 105/187 (56%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  NQL  LP  IG L  L++L +  + L  LP+ I   ++L EL+ + N
Sbjct: 158 GQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHN 217

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+   ++ N++ ILP+ +  L +L  L    N L  LP+++  L 
Sbjct: 218 QLTILPKEIG-QLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQ 276

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+   +  N      LP  IG L +L EL +SYN++TT P  IG L+KLQ L+L  N L
Sbjct: 277 NLQRFVLDNN--QFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQL 334

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 335 TTLPEEI 341



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVL      L +LP++++ L NL++L++  N   L  LP  IG L +L 
Sbjct: 38  LTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHN--QLTALPKEIGQLKNLQ 95

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L + YN++T LP  IG L+ L+ L L  N L + P ++
Sbjct: 96  LLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEI 134


>gi|418688840|ref|ZP_13249975.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400361998|gb|EJP17951.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 492

 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 126/221 (57%), Gaps = 10/221 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  NQ+K +P  I  L KL+ L +  N L +LP+ I   ++L+ L+ + N
Sbjct: 273 GQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQNLQSLDLSTN 332

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG  L NL+ L +  N++ ILP  +  L +L+ L+ R N L +L +++E L 
Sbjct: 333 RLTTLPQEIG-HLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQ 391

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++  N   L   P  IG L +L  LD+  N++TTLP+ IG L+ LQ L L+ N L
Sbjct: 392 NLKSLDLRSN--QLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQL 449

Query: 188 VSPPMDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
            + P ++ + Q L  +       +NN+  S ++K  + KL+
Sbjct: 450 TTLPQEIGQLQNLQEL------FLNNNQLSSQEKKRIRKLL 484



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 115/187 (61%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L ++ NQL  LP  IG L  LKVL ++ N L +LP  I   ++L+ L+   N
Sbjct: 89  GQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNN 148

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L ++ N++  LP+ +  L +L++L    + L +LP+++  L 
Sbjct: 149 QLTILPKEIG-QLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTTLPKEIGKLE 207

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L++ ++   L  LP  IG L +L ELD+S+N++T LP  IG L+KLQ L L  N L
Sbjct: 208 NLQLLSLYES--QLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQKLQWLYLPKNQL 265

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 266 TTLPQEI 272



 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L ++ +QL  LP  IG L  L++L +  + L  LP+ I   ++L EL+ + N
Sbjct: 181 GKLENLQLLSLYESQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHN 240

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L  L+ L +  N++  LPQ +  L +L+ L+   N +K++P+++E L 
Sbjct: 241 QLTILPKEIG-QLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQ 299

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L +  N   L TLP  IG L +L  LD+S N++TTLP  IG L+ LQ L L  N L
Sbjct: 300 KLQSLYLPNN--QLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQL 357

Query: 188 VSPPMDV 194
              P ++
Sbjct: 358 TILPNEI 364



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 113/209 (54%), Gaps = 24/209 (11%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL +++NQL  LP  I  L  L++LD+  N L  LPK I   ++L+EL  ++N
Sbjct: 112 GQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYN 171

Query: 68  KLRQLPDTIG----------FE------------LINLKTLSINCNKIVILPQSLTHLTS 105
           +L  LP  IG          +E            L NL+ LS+  +++ ILPQ +  L +
Sbjct: 172 QLTTLPKEIGKLENLQLLSLYESQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQN 231

Query: 106 LRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
           L  LD   N L  LP+++  L  L+ L + +N   L TLP  IG L +L  L++SYN+I 
Sbjct: 232 LHELDLSHNQLTILPKEIGQLQKLQWLYLPKN--QLTTLPQEIGQLKNLKSLNLSYNQIK 289

Query: 166 TLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           T+P  I  L+KLQ L L  N L + P ++
Sbjct: 290 TIPKEIEKLQKLQSLYLPNNQLTTLPQEI 318



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/184 (39%), Positives = 105/184 (57%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL +   +L  LP  I  L  LK+LD+  N L +LPK I   ++L+ L   +N+L 
Sbjct: 46  LDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLT 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG +L NLK L +N N++  LP  +  L +L++LD   N L  LP+++  L NL+
Sbjct: 106 ALPKEIG-QLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQ 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +S N   L TLP  IG L +L  L +  +++TTLP  IG L  LQ LSL  + L   
Sbjct: 165 ELYLSYN--QLTTLPKEIGKLENLQLLSLYESQLTTLPKEIGKLENLQLLSLYESQLTIL 222

Query: 191 PMDV 194
           P ++
Sbjct: 223 PQEI 226



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVL      L +LP++++ L NL++L++  N   L  LP  IG L +L 
Sbjct: 38  LTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHN--QLTALPKEIGQLKNLQ 95

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L + YN++T LP  IG L+ L+ L L  N L + P ++
Sbjct: 96  LLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEI 134


>gi|427737941|ref|YP_007057485.1| hypothetical protein Riv7116_4517 [Rivularia sp. PCC 7116]
 gi|427372982|gb|AFY56938.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 868

 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 104/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  NQL  LP   G L+ L+ L +  N L +LP  I   R L+ L    N
Sbjct: 36  GQLTNLQYLHLSYNQLSSLPEEFGQLTNLQFLYLLENQLSTLPAEIGQLRKLQCLYLRRN 95

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL++L +N N++  LP     L  L+    R N L SLPE++  L 
Sbjct: 96  QLSILPEEIG-QLTNLQSLYLNENQLSTLPAEFGQLRKLQCFYLRRNQLSSLPEEIGQLT 154

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +++N   L TLP  IG L +L  L +SYN++++LP  IG L  LQ L L  N L
Sbjct: 155 NLQSLYLNEN--QLSTLPPEIGQLSNLQYLHLSYNQLSSLPPEIGQLSNLQYLHLSYNQL 212

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 213 SSLPEEI 219



 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 108/188 (57%), Gaps = 4/188 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  +  L +  NQL  LP  IG L+ L+ L ++ N L +LP      R L+      N
Sbjct: 82  GQLRKLQCLYLRRNQLSILPEEIGQLTNLQSLYLNENQLSTLPAEFGQLRKLQCFYLRRN 141

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL++L +N N++  LP  +  L++L+ L    N L SLP ++  L 
Sbjct: 142 QLSSLPEEIG-QLTNLQSLYLNENQLSTLPPEIGQLSNLQYLHLSYNQLSSLPPEIGQLS 200

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLR-KLQKLSLEGNP 186
           NL+ L++S N   L +LP  IG L +L  L + YN++++LP  IG L   L +L+L+GNP
Sbjct: 201 NLQYLHLSYN--QLSSLPEEIGQLTNLQSLYLRYNQLSSLPPEIGRLHSHLTELTLDGNP 258

Query: 187 LVSPPMDV 194
           L S P ++
Sbjct: 259 LESLPAEI 266



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/137 (37%), Positives = 80/137 (58%), Gaps = 9/137 (6%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L N+  L ++ NQL  LP  IG LS L+ L +S N L SLP  I    +L+ 
Sbjct: 146 LPEEI-GQLTNLQSLYLNENQLSTLPPEIGQLSNLQYLHLSYNQLSSLPPEIGQLSNLQY 204

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSL----THLTSLRVLDARLNCLK 117
           L+ ++N+L  LP+ IG +L NL++L +  N++  LP  +    +HLT L  LD   N L+
Sbjct: 205 LHLSYNQLSSLPEEIG-QLTNLQSLYLRYNQLSSLPPEIGRLHSHLTEL-TLDG--NPLE 260

Query: 118 SLPEDLENLINLEVLNI 134
           SLP ++   I+  +LN 
Sbjct: 261 SLPAEIRGKISQVILNF 277


>gi|71896833|ref|NP_001026466.1| leucine-rich repeat-containing protein 40 [Gallus gallus]
 gi|82233906|sp|Q5ZLN0.1|LRC40_CHICK RecName: Full=Leucine-rich repeat-containing protein 40
 gi|53129131|emb|CAG31363.1| hypothetical protein RCJMB04_5h5 [Gallus gallus]
          Length = 603

 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/281 (29%), Positives = 134/281 (47%), Gaps = 66/281 (23%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           + VLDVH NQL  LP+++G L  L+ LDVS N L+S+P+ +     L+ L    N+L  L
Sbjct: 107 LTVLDVHDNQLTSLPSALGQLENLQKLDVSHNKLKSIPEELLQLSHLKGLLLQHNELSHL 166

Query: 73  PDTIG---------------------FE-LINLKTLSINCNKIVILPQSLTHLTSLRVLD 110
           PD  G                     F  LINL  L++ CN++  LP  ++ + SLR LD
Sbjct: 167 PDGFGQLVSLEELDLSNNHLTDIPKSFALLINLVRLNLACNQLKDLPADISAMKSLRQLD 226

Query: 111 ARLNCLKSLPEDLENLINLEVLNI-------------------------------SQNFQ 139
              N L+S+P +L ++ +LE L +                               ++N +
Sbjct: 227 CTKNYLESVPSELASMASLEQLYLRKNKLRSLPELPSCKLLKELHAGENQIEILNAENLK 286

Query: 140 YLETL-------------PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           +L +L             P  I LL  L  LD++ N I+ LP ++G L +L+ L+LEGNP
Sbjct: 287 HLNSLSVLELRDNKIKSVPDEITLLQKLERLDLANNDISRLPYTLGNLSQLKFLALEGNP 346

Query: 187 LVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
           L +   D++++G   +  YL  ++ +D  SP ++  V  + 
Sbjct: 347 LRTIRRDLLQKGTQELLKYLRSRIQDDKASPNEEPPVTAMT 387



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/172 (36%), Positives = 94/172 (54%), Gaps = 3/172 (1%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SNQL+CL   +  L  L VLDV  N L SLP  +    +L++L+ + NKL+ +P+ +  +
Sbjct: 91  SNQLRCLSEDVRLLPALTVLDVHDNQLTSLPSALGQLENLQKLDVSHNKLKSIPEEL-LQ 149

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +LK L +  N++  LP     L SL  LD   N L  +P+    LINL  LN++ N  
Sbjct: 150 LSHLKGLLLQHNELSHLPDGFGQLVSLEELDLSNNHLTDIPKSFALLINLVRLNLACN-- 207

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            L+ LP  I  + SL +LD + N + ++P  +  +  L++L L  N L S P
Sbjct: 208 QLKDLPADISAMKSLRQLDCTKNYLESVPSELASMASLEQLYLRKNKLRSLP 259



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 99/203 (48%), Gaps = 12/203 (5%)

Query: 15  VLDVHSNQLKCLPNSIGCLSK---LKVLDVSGNLLESLP-KTIENCRSLEELNANFNKLR 70
           +LD    Q+  +P+ +    +   +  ++ S N L ++P + +E   S+ ++N  FNK+ 
Sbjct: 404 LLDYSEKQVAVIPDDVFSAVRSNPVTSVNFSKNQLTAIPPRIVELKDSVCDVNFGFNKI- 462

Query: 71  QLPDTIGFELINLKTLS---INCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
               ++  EL  L  L+   I  N +  LP+ +  LT L+V++   N  K  P  L  ++
Sbjct: 463 ---SSVSLELCTLHKLTHLDIRNNVLTSLPEEMEALTRLQVINLSFNRFKVFPSVLYRML 519

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE + +S N Q     P  +  +  L  LD+  N +  +P  +G    L+ L LEGNP 
Sbjct: 520 ALETILLSNN-QVGSIDPLQLKKMEQLGTLDLQNNDLLQVPPELGNCETLRTLLLEGNPF 578

Query: 188 VSPPMDVVEQGLSAVKGYLSEKM 210
            +P   ++ +G +AV  YL  ++
Sbjct: 579 RTPRAAILAKGTAAVLEYLRSRI 601



 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 70/154 (45%), Gaps = 25/154 (16%)

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
           +E  +L  L +  N++  L + +  L +L VLD   N L SLP  L  L NL+ L++S N
Sbjct: 79  WEQTDLTKLILASNQLRCLSEDVRLLPALTVLDVHDNQLTSLPSALGQLENLQKLDVSHN 138

Query: 138 -------------------FQY--LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
                               Q+  L  LP   G L+SL ELD+S N +T +P S   L  
Sbjct: 139 KLKSIPEELLQLSHLKGLLLQHNELSHLPDGFGQLVSLEELDLSNNHLTDIPKSFALLIN 198

Query: 177 LQKLSLEGNPLVSPPMDVVE----QGLSAVKGYL 206
           L +L+L  N L   P D+      + L   K YL
Sbjct: 199 LVRLNLACNQLKDLPADISAMKSLRQLDCTKNYL 232


>gi|157106660|ref|XP_001649425.1| shoc2 [Aedes aegypti]
 gi|108868804|gb|EAT33029.1| AAEL014718-PA [Aedes aegypti]
          Length = 527

 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/177 (36%), Positives = 108/177 (61%), Gaps = 3/177 (1%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           ++ N++  LP  IGCLS LK L ++ N L SLP +++N + L+ L+   NKL ++PD I 
Sbjct: 76  LYGNKISSLPVEIGCLSNLKTLALNENSLTSLPDSLQNLKQLKVLDLRHNKLSEIPDVI- 134

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
           ++L  L TL +  N+I ++  +L +L+ L +L  R N +  LP  + +L+NL  L++S N
Sbjct: 135 YKLHTLTTLYLRFNRIKVVGDNLKNLSHLTMLSLRENKIHELPSAIGHLVNLTTLDLSHN 194

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +L+ LP  IG  ++L  LD+ +N +  +P++IG L  L +L L  N L S P+ +
Sbjct: 195 --HLKHLPAEIGNCVNLTALDLQHNDLLDIPETIGNLANLMRLGLRYNQLTSIPVSL 249



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 102/182 (56%), Gaps = 3/182 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+  L ++ N L  LP+S+  L +LKVLD+  N L  +P  I    +L  L   FN++
Sbjct: 91  LSNLKTLALNENSLTSLPDSLQNLKQLKVLDLRHNKLSEIPDVIYKLHTLTTLYLRFNRI 150

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           + + D +   L +L  LS+  NKI  LP ++ HL +L  LD   N LK LP ++ N +NL
Sbjct: 151 KVVGDNLK-NLSHLTMLSLRENKIHELPSAIGHLVNLTTLDLSHNHLKHLPAEIGNCVNL 209

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
             L++  N   L  +P +IG L +L+ L + YN++T++P S+     + + ++EGN +  
Sbjct: 210 TALDLQHN--DLLDIPETIGNLANLMRLGLRYNQLTSIPVSLKNCTHMDEFNVEGNGISQ 267

Query: 190 PP 191
            P
Sbjct: 268 LP 269



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 101/194 (52%), Gaps = 25/194 (12%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +V L+  +N L  LP+ I CL  L++L +S N+L+ +P TI N + L  L+   N+L  L
Sbjct: 350 MVELNFGTNSLTKLPDDIHCLQNLEILILSNNVLKRIPNTIGNLKKLRVLDLEENRLESL 409

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P  IG  L +L+ L +  N++  LP+++ HLT+L  L    N L+ LPE++  L NLE L
Sbjct: 410 PSEIGL-LHDLQKLILQSNQLTSLPRTIGHLTNLTYLSVGENNLQFLPEEIGTLENLESL 468

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
            I+ N   ++ LPY + L                      C + L  +S+E  PL + P 
Sbjct: 469 YINDNASLVK-LPYELAL----------------------C-QNLAIMSIENCPLSALPP 504

Query: 193 DVVEQGLSAVKGYL 206
           +VV  G S V  YL
Sbjct: 505 EVVSGGPSLVIQYL 518



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 104/232 (44%), Gaps = 50/232 (21%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           +N+  LD+  N L  +P +IG L+ L  L +  N L S+P +++NC  ++E N   N + 
Sbjct: 207 VNLTALDLQHNDLLDIPETIGNLANLMRLGLRYNQLTSIPVSLKNCTHMDEFNVEGNGIS 266

Query: 71  QLPDTIGFELINLKTL----------------------SINC------------------ 90
           QLPD +   L NL T+                      SIN                   
Sbjct: 267 QLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNVTSINMEHNQIDKIQYGIFSRAKG 326

Query: 91  --------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
                   N +  LP  +   T +  L+   N L  LP+D+  L NLE+L +S N   L+
Sbjct: 327 LTKLNMKENALTSLPLDIGTWTQMVELNFGTNSLTKLPDDIHCLQNLEILILSNNV--LK 384

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            +P +IG L  L  LD+  N++ +LP  IG L  LQKL L+ N L S P  +
Sbjct: 385 RIPNTIGNLKKLRVLDLEENRLESLPSEIGLLHDLQKLILQSNQLTSLPRTI 436



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 102/229 (44%), Gaps = 48/229 (20%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L ++ +L +  N++  LP++IG L  L  LD+S N L+ LP  I NC +L  L+   N L
Sbjct: 160 LSHLTMLSLRENKIHELPSAIGHLVNLTTLDLSHNHLKHLPAEIGNCVNLTALDLQHNDL 219

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLIN 128
             +P+TIG  L NL  L +  N++  +P SL + T +   +   N +  LP+  L +L N
Sbjct: 220 LDIPETIG-NLANLMRLGLRYNQLTSIPVSLKNCTHMDEFNVEGNGISQLPDGLLASLSN 278

Query: 129 LEVLNISQN----------------------------FQY------------------LE 142
           L  + +S+N                             QY                  L 
Sbjct: 279 LTTITLSRNAFHSYPSGGPAQFTNVTSINMEHNQIDKIQYGIFSRAKGLTKLNMKENALT 338

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           +LP  IG    +VEL+   N +T LPD I CL+ L+ L L  N L   P
Sbjct: 339 SLPLDIGTWTQMVELNFGTNSLTKLPDDIHCLQNLEILILSNNVLKRIP 387



 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 12/153 (7%)

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           ++ L ++ + I I+P S+   TSL       N + SLP ++  L NL+ L +++N   L 
Sbjct: 48  IQRLDLSKSSITIIPPSVKDCTSLVEFYLYGNKISSLPVEIGCLSNLKTLALNEN--SLT 105

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAV 202
           +LP S+  L  L  LD+ +NK++ +PD I  L  L  L L  N +      VV   L  +
Sbjct: 106 SLPDSLQNLKQLKVLDLRHNKLSEIPDVIYKLHTLTTLYLRFNRI-----KVVGDNLKNL 160

Query: 203 K--GYLSEKMNNDHKSPKKKSWVGKLVKYGTFN 233
                LS + N  H+ P   S +G LV   T +
Sbjct: 161 SHLTMLSLRENKIHELP---SAIGHLVNLTTLD 190


>gi|327282312|ref|XP_003225887.1| PREDICTED: leucine-rich repeat-containing protein 7-like [Anolis
           carolinensis]
          Length = 1454

 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/191 (37%), Positives = 112/191 (58%), Gaps = 4/191 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP  IG L +L  LDVS N +ES+   I  C +LE+
Sbjct: 199 LPEVL-EQIQNLKELWMDNNALQTLPGPIGRLKQLVYLDVSKNRIESIDMDISGCEALED 257

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+QLPD+IG  L  L TL ++ N++ +LP ++ +L+ L   D   N L+SLP 
Sbjct: 258 LLLSSNMLQQLPDSIGL-LKRLTTLKVDDNQLTVLPNAIGNLSLLEEFDCSCNELESLPP 316

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L + +NF  L  LP  IG   ++  + +  NK+  LPD IG ++KL+ L+
Sbjct: 317 TIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPDEIGQMQKLRVLN 374

Query: 182 LEGNPLVSPPM 192
           L  N L + P+
Sbjct: 375 LSDNRLKNLPI 385



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 108/233 (46%), Gaps = 50/233 (21%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  LK LD+S N ++  P+ I+ C+ L 
Sbjct: 59  EELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNGIQDFPENIKCCKCLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   L  LR+L+ R N LK+L
Sbjct: 119 IIEASVNPISKLPD--GFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTL 176

Query: 120 PEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELD 158
           P+ +  L  LE L++  N                        L+TLP  IG L  LV LD
Sbjct: 177 PKSMHKLTQLERLDLGNNEFSELPEVLEQIQNLKELWMDNNALQTLPGPIGRLKQLVYLD 236

Query: 159 VSYNKITT-----------------------LPDSIGCLRKLQKLSLEGNPLV 188
           VS N+I +                       LPDSIG L++L  L ++ N L 
Sbjct: 237 VSKNRIESIDMDISGCEALEDLLLSSNMLQQLPDSIGLLKRLTTLKVDDNQLT 289



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 72/137 (52%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +P+S+   L  +  L V  NQL  LPN+IG LS L+  D S N LESLP TI    SL 
Sbjct: 267 QLPDSI-GLLKRLTTLKVDDNQLTVLPNAIGNLSLLEEFDCSCNELESLPPTIGYLHSLR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L  + N L +LP  IG    N+  +S+  NK+  LP  +  +  LRVL+   N LK+LP
Sbjct: 326 TLAVDENFLPELPREIG-SCKNVTVMSLRSNKLEFLPDEIGQMQKLRVLNLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  L +S N
Sbjct: 385 ITFTKLKELAALWLSDN 401



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 69  LRQLP-DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P +   FE   L+ L ++ N+I  LP+ L +  +LR L    N L SLP  + +L+
Sbjct: 34  LQQVPKEVFNFERT-LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLV 92

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           NL+ L+IS+N   ++  P +I     L  ++ S N I+ LPD    L  L +L L
Sbjct: 93  NLKELDISKNG--IQDFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYL 145



 Score = 43.9 bits (102), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 39/61 (63%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP+ IG + KL+VL++S N L++LP T    + L  L  + N+ + 
Sbjct: 346 NVTVMSLRSNKLEFLPDEIGQMQKLRVLNLSDNRLKNLPITFTKLKELAALWLSDNQSKA 405

Query: 72  L 72
           L
Sbjct: 406 L 406



 Score = 37.7 bits (86), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 50/103 (48%), Gaps = 4/103 (3%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L ++  L V  N L  LP  IG    + V+ +  N LE LP  I   + L  LN + N+L
Sbjct: 321 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPDEIGQMQKLRVLNLSDNRL 380

Query: 70  RQLPDTIG--FELINLKTLSINCNKIVILPQSLTHL-TSLRVL 109
           + LP T     EL  L  LS N +K +I  Q+  H  T  RVL
Sbjct: 381 KNLPITFTKLKELAAL-WLSDNQSKALIPLQTEAHPETKQRVL 422


>gi|271966020|ref|YP_003340216.1| hypothetical protein [Streptosporangium roseum DSM 43021]
 gi|270509195|gb|ACZ87473.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
          Length = 416

 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/190 (37%), Positives = 111/190 (58%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P++L   L ++  L ++ NQL  LP ++G L+ L  LD+S N L +LP T+ N  SL  
Sbjct: 207 LPDTL-GNLASLTKLSLYGNQLTALPETLGNLTDLTELDLSSNRLTTLPDTLGNLASLTM 265

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+L  LP+T+G  L NL  L ++ N++  LP+ L +LT L    A  N L ++PE
Sbjct: 266 LSLYGNQLTALPETLG-NLTNLTELDLSSNRLTTLPEVLGNLTDLTTFIAHDNLLTAVPE 324

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L ++ +L +L +S N   L TLP ++G L SL  L +  N++T LP+++G L  L  L 
Sbjct: 325 WLGDITDLTLLGLSGN--RLTTLPDTLGNLTSLTMLSLYGNQLTALPETLGNLTDLTDLE 382

Query: 182 LEGNPLVSPP 191
           L  N L + P
Sbjct: 383 LWNNRLTALP 392



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 114/186 (61%), Gaps = 4/186 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE+L   L ++  LD+ SN+L  LP+++G L+ L +L + GN L +LP+T+ N  +L E
Sbjct: 230 LPETL-GNLTDLTELDLSSNRLTTLPDTLGNLASLTMLSLYGNQLTALPETLGNLTNLTE 288

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L  LP+ +G  L +L T   + N +  +P+ L  +T L +L    N L +LP+
Sbjct: 289 LDLSSNRLTTLPEVLG-NLTDLTTFIAHDNLLTAVPEWLGDITDLTLLGLSGNRLTTLPD 347

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L NL +L +L++  N   L  LP ++G L  L +L++  N++T LP+S+G L  L  ++
Sbjct: 348 TLGNLTSLTMLSLYGN--QLTALPETLGNLTDLTDLELWNNRLTALPESLGDLPDLTWIN 405

Query: 182 LEGNPL 187
           L GNP+
Sbjct: 406 LSGNPI 411



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/211 (36%), Positives = 115/211 (54%), Gaps = 23/211 (10%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L   L ++  LD+ SN+L  LP  +G L+ L +L++SGN L +LP T+ N  SL +
Sbjct: 161 LPEWL-GNLTDLTELDLSSNRLTALPEVLGNLTDLTLLNLSGNRLTTLPDTLGNLASLTK 219

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+L  LP+T+G  L +L  L ++ N++  LP +L +L SL +L    N L +LPE
Sbjct: 220 LSLYGNQLTALPETLG-NLTDLTELDLSSNRLTTLPDTLGNLASLTMLSLYGNQLTALPE 278

Query: 122 DLENLINLEVLNISQN---------------------FQYLETLPYSIGLLMSLVELDVS 160
            L NL NL  L++S N                        L  +P  +G +  L  L +S
Sbjct: 279 TLGNLTNLTELDLSSNRLTTLPEVLGNLTDLTTFIAHDNLLTAVPEWLGDITDLTLLGLS 338

Query: 161 YNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            N++TTLPD++G L  L  LSL GN L + P
Sbjct: 339 GNRLTTLPDTLGNLTSLTMLSLYGNQLTALP 369



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 71/185 (38%), Positives = 105/185 (56%), Gaps = 6/185 (3%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELIN 82
           L  LP  +G L+ L  LD+S N L +LP+ + N   L  LN + N+L  LPDT+G  L +
Sbjct: 158 LTTLPEWLGNLTDLTELDLSSNRLTALPEVLGNLTDLTLLNLSGNRLTTLPDTLG-NLAS 216

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           L  LS+  N++  LP++L +LT L  LD   N L +LP+ L NL +L +L++  N   L 
Sbjct: 217 LTKLSLYGNQLTALPETLGNLTDLTELDLSSNRLTTLPDTLGNLASLTMLSLYGN--QLT 274

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP---MDVVEQGL 199
            LP ++G L +L ELD+S N++TTLP+ +G L  L       N L + P    D+ +  L
Sbjct: 275 ALPETLGNLTNLTELDLSSNRLTTLPEVLGNLTDLTTFIAHDNLLTAVPEWLGDITDLTL 334

Query: 200 SAVKG 204
             + G
Sbjct: 335 LGLSG 339



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 120/221 (54%), Gaps = 29/221 (13%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPESL + L ++  LD+  N L  +P+S+  L  L  L++  N LE++  T+ +  +LE 
Sbjct: 35  IPESL-SDLTHLARLDLSENNLSDIPSSLRDLPALTELNLRANFLETVSDTLGDLVTLEV 93

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNC------ 115
           L+   N L Q PD++G  LI L  L+++ N +  LP +L +LT+L     RLN       
Sbjct: 94  LDLRENGLSQAPDSLG-NLIALTELNLSENYLSALPDTLKNLTAL----TRLNLSSLGML 148

Query: 116 ---------LKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITT 166
                    L +LPE L NL +L  L++S N   L  LP  +G L  L  L++S N++TT
Sbjct: 149 APEFFPTLGLTTLPEWLGNLTDLTELDLSSN--RLTALPEVLGNLTDLTLLNLSGNRLTT 206

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPP------MDVVEQGLSA 201
           LPD++G L  L KLSL GN L + P       D+ E  LS+
Sbjct: 207 LPDTLGNLASLTKLSLYGNQLTALPETLGNLTDLTELDLSS 247



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 111/223 (49%), Gaps = 36/223 (16%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP SL   L  +  L++ +N L+ + +++G L  L+VLD+  N L   P ++ N  +L E
Sbjct: 58  IPSSL-RDLPALTELNLRANFLETVSDTLGDLVTLEVLDLRENGLSQAPDSLGNLIALTE 116

Query: 62  LNANFNKLRQLPDTI----GFELINLKTLSINCNK------IVILPQSLTHLTSLRVLDA 111
           LN + N L  LPDT+        +NL +L +   +      +  LP+ L +LT L  LD 
Sbjct: 117 LNLSENYLSALPDTLKNLTALTRLNLSSLGMLAPEFFPTLGLTTLPEWLGNLTDLTELDL 176

Query: 112 RLNCLKSLPE-----------------------DLENLINLEVLNISQNFQYLETLPYSI 148
             N L +LPE                        L NL +L  L++  N   L  LP ++
Sbjct: 177 SSNRLTALPEVLGNLTDLTLLNLSGNRLTTLPDTLGNLASLTKLSLYGN--QLTALPETL 234

Query: 149 GLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           G L  L ELD+S N++TTLPD++G L  L  LSL GN L + P
Sbjct: 235 GNLTDLTELDLSSNRLTTLPDTLGNLASLTMLSLYGNQLTALP 277



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 2/108 (1%)

Query: 84  KTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLET 143
            TL ++   +  +P+SL+ LT L  LD   N L  +P  L +L  L  LN+  NF  LET
Sbjct: 23  TTLDLSSLGLSEIPESLSDLTHLARLDLSENNLSDIPSSLRDLPALTELNLRANF--LET 80

Query: 144 LPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           +  ++G L++L  LD+  N ++  PDS+G L  L +L+L  N L + P
Sbjct: 81  VSDTLGDLVTLEVLDLRENGLSQAPDSLGNLIALTELNLSENYLSALP 128


>gi|126273103|ref|XP_001368489.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Monodelphis
           domestica]
          Length = 582

 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 113/196 (57%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+P S+   L  +  L ++SN+L+ LP  +GCL  L  L +S N L SLP +++N + L 
Sbjct: 114 MLPSSI-KELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLR 172

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKLR++P  + + L +L TL +  N+I  + + + +L+ L +L  R N +K LP
Sbjct: 173 MLDLRHNKLREIPSVV-YRLDSLTTLYLRFNRITTVEKDIKNLSKLIMLSIRENKIKQLP 231

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG  + +  LD+ +N++  LP++IG L  L +L
Sbjct: 232 AEIGELCNLITLDVAHN--QLEHLPKEIGTCIQITNLDLQHNELLDLPETIGNLSSLNRL 289

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N L + P  + +
Sbjct: 290 GLRYNRLSAIPRSLAK 305



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 104/187 (55%), Gaps = 12/187 (6%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +++L +  N++K LP  IG L  L  LDV+ N LE LPK I  C  +  L+   N+L  L
Sbjct: 217 LIMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGTCIQITNLDLQHNELLDL 276

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEV 131
           P+TIG  L +L  L +  N++  +P+SL   ++L  L+   N + +LPE  L +L+NL  
Sbjct: 277 PETIG-NLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPEGLLSSLVNLNS 335

Query: 132 LNISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNP 186
           L +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N 
Sbjct: 336 LTLARNCFQS-----YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQ 390

Query: 187 LVSPPMD 193
           L S P+D
Sbjct: 391 LTSLPLD 397



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 88/159 (55%), Gaps = 2/159 (1%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +V L++ +NQL  +P  +  L  L+VL +S N+L+ LP  + N R L EL+   NKL  L
Sbjct: 404 MVELNLATNQLAKIPEDVSGLVSLEVLILSNNVLKKLPHGLGNLRKLRELDLEENKLESL 463

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P+ I + L +L+ L +  N++  LP+ + HLT+L  L    N L  LPE++  L NLE L
Sbjct: 464 PNEIAY-LKDLQKLVLTNNQLNNLPRGIGHLTNLTHLGLGENLLAHLPEEIGTLENLEEL 522

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
            ++ N   L  LP+ + L   L  + +    ++ LP  I
Sbjct: 523 YLNDN-PNLHGLPFELALCSKLSIMSIENCPLSHLPPQI 560



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 109/232 (46%), Gaps = 50/232 (21%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           + +  LD+  N+L  LP +IG LS L  L +  N L ++P+++  C +LEELN   N + 
Sbjct: 261 IQITNLDLQHNELLDLPETIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNIS 320

Query: 71  QLPDTIGFELINLKTLSI--NC-------------------------------------- 90
            LP+ +   L+NL +L++  NC                                      
Sbjct: 321 TLPEGLLSSLVNLNSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKV 380

Query: 91  --------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
                   N++  LP      TS+  L+   N L  +PED+  L++LEVL +S N   L+
Sbjct: 381 LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLAKIPEDVSGLVSLEVLILSNNV--LK 438

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LP+ +G L  L ELD+  NK+ +LP+ I  L+ LQKL L  N L + P  +
Sbjct: 439 KLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLNNLPRGI 490



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 95/177 (53%), Gaps = 8/177 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 357 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  L +L  LR LD   N L+SLP ++  L +L
Sbjct: 415 AKIPEDVSG-LVSLEVLILSNNVLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           + L ++ N   L  LP  IG L +L  L +  N +  LP+ IG L  L++L L  NP
Sbjct: 474 QKLVLTNN--QLNNLPRGIGHLTNLTHLGLGENLLAHLPEEIGTLENLEELYLNDNP 528



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +PE L + L+N+  L +  N  +  P       S +  L++  N +  +P  I    + L
Sbjct: 322 LPEGLLSSLVNLNSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL 381

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP   G    ++  L++  N++  +P+ ++ L SL VL    N LK L
Sbjct: 382 SKLNMKDNQLTSLPLDFG-TWTSMVELNLATNQLAKIPEDVSGLVSLEVLILSNNVLKKL 440

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  L NL  L  L++ +N   LE+LP  I  L  L +L ++ N++  LP  IG L  L  
Sbjct: 441 PHGLGNLRKLRELDLEEN--KLESLPNEIAYLKDLQKLVLTNNQLNNLPRGIGHLTNLTH 498

Query: 180 LSLEGNPLVSPPMDV 194
           L L  N L   P ++
Sbjct: 499 LGLGENLLAHLPEEI 513



 Score = 37.4 bits (85), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 28/51 (54%)

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           +  LP SI  L  L EL +  NK+ +LP  +GCL  L  L+L  N L S P
Sbjct: 112 IHMLPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLP 162


>gi|417764010|ref|ZP_12411983.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400353842|gb|EJP05995.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 427

 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +LD+  NQL  LP  I  L  L++LD+S N L  LPK I   ++L+ L+   N
Sbjct: 47  GQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSN 106

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L ++ N++   P+ +  L  L+ L+   N +K++P+++E L 
Sbjct: 107 QLTILPKEIG-KLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQ 165

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L +  N   L TLP  IG L  L  L++SYN+I TLP  I  L+KLQ L L  N L
Sbjct: 166 KLQSLYLPNN--QLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQL 223

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 224 TTLPQEI 230



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 115/208 (55%), Gaps = 22/208 (10%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  +  L++  NQ+K LP  I  L KL+ L +  N L +LP+ IE  + LE L  + N
Sbjct: 185 GKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNN 244

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NLK L +N N++  +PQ + HL +L+ L    N L ++P+++  L 
Sbjct: 245 QLTTLPQEIG-QLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQ 303

Query: 128 NLEVLNIS--------------QNFQ-------YLETLPYSIGLLMSLVELDVSYNKITT 166
           NL++L++               QN Q        L T+P  IG L +L EL +S N++TT
Sbjct: 304 NLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTT 363

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +P  IG L+ LQ+L L  N L++ P ++
Sbjct: 364 IPKEIGQLQNLQELYLSNNQLITIPKEI 391



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 107/186 (57%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ +LD+ SNQL  LP  IG L  L+ L +S N L + PK I   + L+ LN + N+
Sbjct: 94  QLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQ 153

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           ++ +P  I  +L  L++L +  N++  LPQ +  L  L+ L+   N +K+LP+++E L  
Sbjct: 154 IKTIPKEIE-KLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQK 212

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L + +N   L TLP  I  L  L  L +  N++TTLP  IG L+ L+ L L  N L 
Sbjct: 213 LQWLYLHKN--QLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLT 270

Query: 189 SPPMDV 194
           + P ++
Sbjct: 271 TIPQEI 276



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/170 (38%), Positives = 102/170 (60%), Gaps = 3/170 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L + +NQL  LP  IG L  LKVL ++ N L ++P+ I + ++L++L    N+L  +P  
Sbjct: 239 LGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKE 298

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL+ L +  N++ ILP+ +  L +L+ L    N L ++P+++  L NL+ L +S
Sbjct: 299 IG-QLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLS 357

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            N   L T+P  IG L +L EL +S N++ T+P  IG L+ LQ L L  N
Sbjct: 358 NN--QLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNN 405



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 79/136 (58%), Gaps = 2/136 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +   L N+  L + SNQL  +P  IG L  L++LD+  N L  LPK I   ++L+E
Sbjct: 272 IPQEI-GHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQE 330

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+L  +P  IG +L NL+ L ++ N++  +P+ +  L +L+ L    N L ++P+
Sbjct: 331 LYLSNNQLTTIPKEIG-QLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPK 389

Query: 122 DLENLINLEVLNISQN 137
           ++  L NL+ L +  N
Sbjct: 390 EIGQLQNLQTLYLRNN 405



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 74/140 (52%), Gaps = 12/140 (8%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVLD     LK+LP+ +  L NL++L++S N   L  LP  I  L +L 
Sbjct: 19  LTKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDN--QLIILPKEIRQLKNLQ 76

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGLSAVKGYLSEKMNNDH 214
            LD+S N++  LP  I  L+ LQ L L  N L   P ++ + Q L  +  YLS   NN  
Sbjct: 77  MLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQEL--YLS---NNQL 131

Query: 215 KS-PKKKSWVGKLVKYGTFN 233
            + PK+   +GKL K    N
Sbjct: 132 TTFPKE---IGKLQKLQWLN 148


>gi|351706806|gb|EHB09725.1| Leucine-rich repeat protein SHOC-2 [Heterocephalus glaber]
          Length = 571

 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 110/191 (57%), Gaps = 3/191 (1%)

Query: 6   LTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNAN 65
           L+ R ++++   +  N+L+ LP  +GCL  L  L +S N L SLP +++N + L  L+  
Sbjct: 107 LSKRSIHILPSSIKXNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLR 166

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
            NKLR++P  + + L +L TL +  N+I  + + + +L+ L +L  R N +K LP ++ +
Sbjct: 167 HNKLREIPSVV-YGLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGD 225

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L NL  L+++ N   LE LP  IG    +  LD+ +N++  LPD+IG L  L +L L  N
Sbjct: 226 LCNLITLDVAHN--QLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYN 283

Query: 186 PLVSPPMDVVE 196
            L + P  + +
Sbjct: 284 RLSAIPRSLAK 294



 Score = 81.6 bits (200), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 102/185 (55%), Gaps = 12/185 (6%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  +  L+   N+L  LPD
Sbjct: 208 MLSIRENKIKQLPAEIGDLCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 267

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEVLN 133
           TIG  L +L  L +  N++  +P+SL   ++L  L+   N + +LPE  L +L+ L  L 
Sbjct: 268 TIG-NLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLT 326

Query: 134 ISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNPLV 188
           +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N L 
Sbjct: 327 LARNCFQL-----YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLT 381

Query: 189 SPPMD 193
           S P+D
Sbjct: 382 SLPLD 386



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 2/160 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           ++V L++ +NQL  +P  +  L  L+VL +S NLL+ LP  + N R L EL+   NKL  
Sbjct: 392 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 451

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ I + L +L+ L +  N++  LP+ + HLT+L  L    N L  LPE++  L NLE 
Sbjct: 452 LPNEIAY-LKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEE 510

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           L ++ N   L +LP+ + L   L  + +    ++ LP  I
Sbjct: 511 LYLNDN-PNLHSLPFELALCSKLSIMSIENCPLSHLPAQI 549



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 8/177 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 346 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 403

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  L +L  LR LD   N L+SLP ++  L +L
Sbjct: 404 TKIPEDVSG-LVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 462

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           + L ++ N   L TLP  IG L +L  L +  N +T LP+ IG L  L++L L  NP
Sbjct: 463 QKLVLTNN--QLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNP 517



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N+L  LP++IG LS L  L +  N L ++P+++  C +LEELN   N +  L
Sbjct: 252 ITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTL 311

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+++   L+ L +L++  NC                                        
Sbjct: 312 PESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLS 371

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N L  +PED+  L++LEVL +S N   L+ L
Sbjct: 372 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKL 429

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ +G L  L ELD+  NK+ +LP+ I  L+ LQKL L  N L + P  +
Sbjct: 430 PHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 479



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 97/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +PESL + L+ +  L +  N  +  P       S +  L++  N +  +P  I    + L
Sbjct: 311 LPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL 370

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP   G    ++  L++  N++  +P+ ++ L SL VL    N LK L
Sbjct: 371 SKLNMKDNQLTSLPLDFG-TWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 429

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  L NL  L  L++ +N   LE+LP  I  L  L +L ++ N++TTLP  IG L  L  
Sbjct: 430 PHGLGNLRKLRELDLEEN--KLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTH 487

Query: 180 LSLEGNPLVSPPMDV 194
           L L  N L   P ++
Sbjct: 488 LGLGENLLTHLPEEI 502


>gi|345802228|ref|XP_547338.3| PREDICTED: leucine-rich repeat-containing protein 40 [Canis lupus
           familiaris]
          Length = 631

 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/213 (38%), Positives = 118/213 (55%), Gaps = 30/213 (14%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P S ++ L ++V L++ SNQLK LP  I  + +LK LD + NLLE++P  + N  SLE 
Sbjct: 218 VPASFSS-LSSLVRLNISSNQLKSLPVEISGMKRLKHLDCNSNLLETVPPELANMESLEL 276

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVIL-PQSLTHLTSLRVLDARLNCLKSLP 120
           L    NKLR LP+     L  LK L +  N+I IL P+ L HL S+ VLD R N L+S+P
Sbjct: 277 LYLRRNKLRFLPEFPSCRL--LKELHVGENQIEILGPEHLKHLNSILVLDLRDNKLRSVP 334

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           ++                         I LL SL  LD+S N I++LP S+G L  L+ L
Sbjct: 335 DE-------------------------ITLLQSLERLDLSNNDISSLPCSLGKL-PLKFL 368

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNND 213
           +LEGNPL +   +++ +G   V  YL  K+ +D
Sbjct: 369 ALEGNPLRTIRREIINKGTQEVLKYLRSKIKDD 401



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 89/172 (51%), Gaps = 26/172 (15%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SNQL+ L + +  L  L VLD+  N L SLP  I    +L++LN + NKL+         
Sbjct: 120 SNQLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLQ--------- 170

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
                          ILP+ +T+L +L+ L  + N L  +PE  E L NLE L+IS N  
Sbjct: 171 ---------------ILPEEITNLRNLKGLYLQHNELTRIPEGFEQLFNLEDLDISNN-- 213

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            L T+P S   L SLV L++S N++ +LP  I  +++L+ L    N L + P
Sbjct: 214 RLTTVPASFSSLSSLVRLNISSNQLKSLPVEISGMKRLKHLDCNSNLLETVP 265



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 102/208 (49%), Gaps = 12/208 (5%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSL-EELNAN 65
           ++ + +LD    Q   +P+ +    K  ++   + S N L  +PK I   + +  ++N +
Sbjct: 427 IITLKILDYSDKQTTLIPDEVFDAVKSNIITSVNFSKNQLCEIPKRIVELKEMVSDVNLS 486

Query: 66  FNKLRQLPDTIGFELINLKTLS---INCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED 122
           FNKL      I  EL  L+ L+   +  N +  LP+ +  L  L+ ++   N  K LP+ 
Sbjct: 487 FNKL----SFISLELCMLQKLTFLDLRNNFLNSLPEEMESLIRLQTINLSFNRFKILPDV 542

Query: 123 LENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           L ++  LE + IS N Q     P  +  + +L+ LD+  N +  +P  +G    L+ L L
Sbjct: 543 LYHIPTLETILISNN-QVGSVDPQKMKAMENLITLDLQNNDLLQIPPELGNCVNLRTLLL 601

Query: 183 EGNPLVSPPMDVVEQGLSAVKGYLSEKM 210
           +GNP   P   ++ +G +A+  YL +++
Sbjct: 602 DGNPFRVPRAAILMKGTAAILEYLRDRI 629


>gi|456823117|gb|EMF71587.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 389

 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 111/194 (57%), Gaps = 4/194 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +  +L N+ +L +HSN+L  L   I  L  LK LD+S N L +LP  IE  ++L+
Sbjct: 129 VLPQEI-EQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLK 187

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L  + N+    P  IG +L NLK L +N N+I ILP  +  L  L+ L    N L +LP
Sbjct: 188 SLYLSENQFATFPKEIG-QLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLP 246

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++E L NL+ L++S N   L  LP  +G L +L  LD+  N++ TLP  I  L+ LQ L
Sbjct: 247 KEIEQLKNLQTLDLSYN--QLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTL 304

Query: 181 SLEGNPLVSPPMDV 194
            L  N L+  P ++
Sbjct: 305 FLSNNQLIILPQEI 318



 Score =  103 bits (257), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 111/200 (55%), Gaps = 3/200 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L +  NQ    P  IG L  LKVL ++ N +  LP  I   + L+ L  + N+
Sbjct: 182 QLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQ 241

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  I  +L NL+TL ++ N++ ILP+ +  L +L+ LD R N LK+LP+++E L N
Sbjct: 242 LITLPKEIE-QLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKN 300

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S N   L  LP  IG L +L+ L + YN++TTLP+ I  L+ LQ L L  N   
Sbjct: 301 LQTLFLSNN--QLIILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFS 358

Query: 189 SPPMDVVEQGLSAVKGYLSE 208
           S      E    + K  L++
Sbjct: 359 SQEKKEFENFFQSAKFTLTK 378



 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +H NQL  LP  I  L  L++L +  N L +LPK IE  ++L+ L+   N
Sbjct: 66  GKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L ++ N++  L + +  L +L+ LD   N L +LP ++E L 
Sbjct: 126 QLTVLPQEIE-QLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLK 184

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +S+N     T P  IG L +L  L ++ N+IT LP+ I  L+KLQ L L  N L
Sbjct: 185 NLKSLYLSEN--QFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQL 242

Query: 188 VSPPMDV 194
           ++ P ++
Sbjct: 243 ITLPKEI 249



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 103/186 (55%), Gaps = 3/186 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V VLD+   +LK LP  IG L  L+ L +  N L  LP+ IE  ++L+ L    N+L 
Sbjct: 46  LEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLT 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  I  +L NL+ L +  N++ +LPQ +  L +L++L    N L +L +D+E L NL+
Sbjct: 106 TLPKEIE-QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLK 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++S N   L TLP  I  L +L  L +S N+  T P  IG L+ L+ L L  N +   
Sbjct: 165 SLDLSNN--QLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 191 PMDVVE 196
           P ++ +
Sbjct: 223 PNEIAK 228



 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 92/160 (57%), Gaps = 4/160 (2%)

Query: 49  LPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRV 108
           L K ++N   +  L+ +  +L+ LP  IG +L NL+ L ++ N++ +LPQ +  L +L++
Sbjct: 38  LTKALQNPLEVRVLDLSRQELKTLPIEIG-KLKNLQRLYLHYNQLTVLPQEIEQLKNLQL 96

Query: 109 LDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           L  R N L +LP+++E L NL+VL++  N   L  LP  I  L +L  L +  N++TTL 
Sbjct: 97  LYLRSNRLTTLPKEIEQLKNLQVLDLGSN--QLTVLPQEIEQLKNLQLLYLHSNRLTTLS 154

Query: 169 DSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSE 208
             I  L+ L+ L L  N L + P + +EQ  +    YLSE
Sbjct: 155 KDIEQLQNLKSLDLSNNQLTTLPNE-IEQLKNLKSLYLSE 193



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/130 (37%), Positives = 75/130 (57%), Gaps = 1/130 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A+L  +  L +  NQL  LP  I  L  L+ LD+S N L  LPK +    +L+ L+   N
Sbjct: 227 AKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN 286

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  I  +L NL+TL ++ N+++ILPQ +  L +L  L    N L +LP ++E L 
Sbjct: 287 QLKTLPKEIE-QLKNLQTLFLSNNQLIILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK 345

Query: 128 NLEVLNISQN 137
           NL+ L ++ N
Sbjct: 346 NLQTLYLNNN 355


>gi|326923993|ref|XP_003208217.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Meleagris
           gallopavo]
          Length = 582

 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 111/196 (56%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+P S    L  +  L ++SN+L+ LP  +GCL  L  L +S N L SLP +++N + L 
Sbjct: 114 MLP-SAVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLR 172

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKLR++P  + + L +L TL +  N+I  + + + +L+ L +L  R N +K LP
Sbjct: 173 MLDLRHNKLREIPSVV-YRLTSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLP 231

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG    +  LD+ +N++  LP++IG L  L +L
Sbjct: 232 AEIGELCNLITLDVAHN--QLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRL 289

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N L + P  + +
Sbjct: 290 GLRYNRLSAIPKSLAK 305



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 106/230 (46%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N+L  LP +IG LS L  L +  N L ++PK++  C  L+ELN   N +  L
Sbjct: 263 ITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISTL 322

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+ +   L+ L +L++  NC                                        
Sbjct: 323 PEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLS 382

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N L  +PED+  L++LEVL +S N   L+ L
Sbjct: 383 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKL 440

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ IG L  L ELD+  NK+ +LP+ I  L+ LQKL L  N L + P  +
Sbjct: 441 PHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/159 (36%), Positives = 89/159 (55%), Gaps = 2/159 (1%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +V L++ +NQL  +P  +  L  L+VL +S NLL+ LP  I N R L EL+   NKL  L
Sbjct: 404 MVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESL 463

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P+ I + L +L+ L +  N++  LP+ + HLT+L  L    N L  LPE++  L NLE L
Sbjct: 464 PNEIAY-LKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEEL 522

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
            ++ N   L +LP+ + L   L  + +    ++ LP  I
Sbjct: 523 YLNDN-PNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 560



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 102/183 (55%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N + LD+    +  LP+++  L++L  L +  N L+SLP  +    +L  L  + N L  
Sbjct: 101 NSMRLDLSKRSIHMLPSAVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTS 160

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LPD++   L  L+ L +  NK+  +P  +  LTSL  L  R N + ++ +D++NL  L +
Sbjct: 161 LPDSLD-NLKKLRMLDLRHNKLREIPSVVYRLTSLATLYLRFNRITTVEKDIKNLSKLTM 219

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L+I +N   ++ LP  IG L +L+ LDV++N++  LP+ IG   ++  L L+ N L+  P
Sbjct: 220 LSIREN--KIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLP 277

Query: 192 MDV 194
             +
Sbjct: 278 ETI 280



 Score = 77.0 bits (188), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 97/177 (54%), Gaps = 8/177 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 357 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  + +L  LR LD   N L+SLP ++  L +L
Sbjct: 415 TKIPEDVSG-LVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDL 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           + L ++ N   L TLP  IG L +L  L +  N +T LP+ IG L  L++L L  NP
Sbjct: 474 QKLVLTNN--QLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNP 528



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 96/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +PE L + L+ +  L +  N  +  P       S +  L++  N +  +P  I    + L
Sbjct: 322 LPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL 381

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP   G    ++  L++  N++  +P+ ++ L SL VL    N LK L
Sbjct: 382 SKLNMKDNQLTSLPLDFG-TWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  + NL  L  L++ +N   LE+LP  I  L  L +L ++ N++TTLP  IG L  L  
Sbjct: 441 PHGIGNLRKLRELDLEEN--KLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTH 498

Query: 180 LSLEGNPLVSPPMDV 194
           L L  N L   P ++
Sbjct: 499 LGLGENLLTHLPEEI 513


>gi|354483191|ref|XP_003503778.1| PREDICTED: leucine-rich repeat-containing protein 1-like
           [Cricetulus griseus]
          Length = 526

 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 121/225 (53%), Gaps = 23/225 (10%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 120 LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L SL  LD   N L+ LPE
Sbjct: 179 LDLGNNEIYNLPESIG-ALLHLKDLWLDGNQLSELPQEIGNLKSLLCLDVSENRLERLPE 237

Query: 122 DLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELDVS 160
           ++  L +L  L ISQN                        L  LP +IG   +L EL ++
Sbjct: 238 EISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLT 297

Query: 161 YNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGY 205
            N++ TLP SIG L+KL  L+ + N LVS P +V + G  ++  +
Sbjct: 298 ENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEVADLGCCSLTVF 342



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 107/195 (54%), Gaps = 7/195 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   AR L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L
Sbjct: 27  VPEEIYRYARSLEELLLD--ANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP+S   L +L  L      L+SL
Sbjct: 85  VELDVSRNDIPEIPESISF-CKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++ NL NL  L + +N   L  LP S+  L  L ELD+  N+I  LP+SIG L  L+ 
Sbjct: 144 PENIGNLYNLASLELRENL--LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKD 201

Query: 180 LSLEGNPLVSPPMDV 194
           L L+GN L   P ++
Sbjct: 202 LWLDGNQLSELPQEI 216



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/178 (36%), Positives = 99/178 (55%), Gaps = 6/178 (3%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L +++ LDV  N+L+ LP  I  L+ L  L +S NLLE++P  I   + L  L  + N+L
Sbjct: 219 LKSLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKLDQNRL 278

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENL--I 127
            QLP+ IG +  NL  L +  N+++ LP+S+  L  L  L+A  N L SLP+++ +L   
Sbjct: 279 TQLPEAIG-DCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEVADLGCC 337

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           +L V  +  N   L  +P  +   M L  LDV+ N++  LP S+  L KL+ L L  N
Sbjct: 338 SLTVFCVRNN--RLTRIPSEVSQAMELHVLDVAGNRLRHLPLSLTTL-KLKALWLSDN 392



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 27/164 (16%)

Query: 32  CLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINC 90
           C   ++V+D     L  +P+ I    RSLEEL  + N+LR+LP+   F+L+ L+ L ++ 
Sbjct: 10  CNRHVEVIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQF-FQLVKLRKLGLSD 68

Query: 91  NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL 150
           N+I                       + LP ++ N + L  L++S+N   +  +P SI  
Sbjct: 69  NEI-----------------------QRLPPEIANFMQLVELDVSRN--DIPEIPESISF 103

Query: 151 LMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +L   D S N +T LP+S   L+ L  LS+    L S P ++
Sbjct: 104 CKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENI 147


>gi|156120535|ref|NP_001095413.1| leucine-rich repeat protein SHOC-2 [Bos taurus]
 gi|426253112|ref|XP_004020244.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Ovis
           aries]
 gi|166977671|sp|A6QLV3.1|SHOC2_BOVIN RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|151553933|gb|AAI48098.1| SHOC2 protein [Bos taurus]
 gi|296472607|tpg|DAA14722.1| TPA: leucine-rich repeat protein SHOC-2 [Bos taurus]
 gi|440906851|gb|ELR57068.1| Leucine-rich repeat protein SHOC-2 [Bos grunniens mutus]
          Length = 582

 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 112/196 (57%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+   L  +  L ++SN+L+ LP  +GCL  L  L +S N L SLP +++N + L 
Sbjct: 114 ILPSSI-KELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLR 172

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKLR++P  + + L +L TL +  N+I  + + + +L+ L +L  R N +K LP
Sbjct: 173 MLDLRHNKLREIPSVV-YRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLP 231

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG    +  LD+ +N++  LPD+IG L  L +L
Sbjct: 232 AEIGELCNLITLDVAHN--QLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRL 289

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N L + P  + +
Sbjct: 290 GLRYNRLSAIPRSLAK 305



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 102/185 (55%), Gaps = 12/185 (6%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  +  L+   N+L  LPD
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEVLN 133
           TIG  L +L  L +  N++  +P+SL   ++L  L+   N + +LPE  L +L+ L  L 
Sbjct: 279 TIG-NLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLT 337

Query: 134 ISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNPLV 188
           +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N L 
Sbjct: 338 LARNCFQL-----YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLT 392

Query: 189 SPPMD 193
           S P+D
Sbjct: 393 SLPLD 397



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 2/160 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           ++V L++ +NQL  +P  +  L  L+VL +S NLL+ LP  + N R L EL+   NKL  
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ I + L +L+ L +  N++  LP+ + HLT+L  L    N L  LPE++  L NLE 
Sbjct: 463 LPNEIAY-LKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEE 521

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           L ++ N   L +LP+ + L   L  + +    ++ LP  I
Sbjct: 522 LYLNDN-PNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 560



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 8/177 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 357 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  L +L  LR LD   N L+SLP ++  L +L
Sbjct: 415 TKIPEDVSG-LVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           + L ++ N   L TLP  IG L +L  L +  N +T LP+ IG L  L++L L  NP
Sbjct: 474 QKLVLTNN--QLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNP 528



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N+L  LP++IG LS L  L +  N L ++P+++  C +LEELN   N +  L
Sbjct: 263 ITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTL 322

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+++   L+ L +L++  NC                                        
Sbjct: 323 PESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLS 382

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N L  +PED+  L++LEVL +S N   L+ L
Sbjct: 383 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKL 440

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ +G L  L ELD+  NK+ +LP+ I  L+ LQKL L  N L + P  +
Sbjct: 441 PHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 97/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +PESL + L+ +  L +  N  +  P       S +  L++  N +  +P  I    + L
Sbjct: 322 LPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL 381

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP   G    ++  L++  N++  +P+ ++ L SL VL    N LK L
Sbjct: 382 SKLNMKDNQLTSLPLDFG-TWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  L NL  L  L++ +N   LE+LP  I  L  L +L ++ N++TTLP  IG L  L  
Sbjct: 441 PHGLGNLRKLRELDLEEN--KLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTH 498

Query: 180 LSLEGNPLVSPPMDV 194
           L L  N L   P ++
Sbjct: 499 LGLGENLLTHLPEEI 513



 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L ++   I ILP S+  LT L  L    N L+SLP ++  L+NL  L +S+N   L +LP
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLP 162

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            S+  L  L  LD+ +NK+  +P  +  L  L  L L  N + +   D+
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 211


>gi|418721889|ref|ZP_13281061.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410741686|gb|EKQ90441.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
          Length = 351

 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 105/186 (56%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L + +NQL  LP  IG L  LK+L +  N L  LPK I   ++LE L+ N N+
Sbjct: 42  QLKNLRELRLDNNQLTTLPKEIGLLQNLKILHLYANQLTILPKEIGQLKNLEYLDLNNNQ 101

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG  L NLK L +  N++ +LP+ +  L +L  LD   N    LP+++  L N
Sbjct: 102 LTTLPKEIGL-LQNLKILHLYANQLTVLPKEIWQLKNLEDLDLSGNSFTILPKEIGRLQN 160

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L  L +  N   L+TLP  IG L +L EL + ++++ TLP  IG L+ LQ LSL  N L 
Sbjct: 161 LGSLIMRHN--QLKTLPKEIGQLKNLGELILEHSQLKTLPKEIGQLKDLQHLSLRNNQLT 218

Query: 189 SPPMDV 194
             P ++
Sbjct: 219 ILPKEI 224



 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 110/210 (52%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELN---- 63
            +L N+  LD+++NQL  LP  IG L  LK+L +  N L  LPK I   ++LE+L+    
Sbjct: 87  GQLKNLEYLDLNNNQLTTLPKEIGLLQNLKILHLYANQLTVLPKEIWQLKNLEDLDLSGN 146

Query: 64  -------------------ANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLT 104
                                 N+L+ LP  IG +L NL  L +  +++  LP+ +  L 
Sbjct: 147 SFTILPKEIGRLQNLGSLIMRHNQLKTLPKEIG-QLKNLGELILEHSQLKTLPKEIGQLK 205

Query: 105 SLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
            L+ L  R N L  LP+++E L NL  L +S +   L  LP  IGLL +LV LD+  N++
Sbjct: 206 DLQHLSLRNNQLTILPKEIEQLKNL--LTLSSDNNQLTVLPKEIGLLQNLVTLDLRNNQL 263

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            TLP  +G L+ L++L L  N L + P +V
Sbjct: 264 KTLPKEVGQLKNLRELYLSANQLKTLPKEV 293



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 108/186 (58%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  LD+  N    LP  IG L  L  L +  N L++LPK I   ++L EL    ++
Sbjct: 134 QLKNLEDLDLSGNSFTILPKEIGRLQNLGSLIMRHNQLKTLPKEIGQLKNLGELILEHSQ 193

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L+ LP  IG +L +L+ LS+  N++ ILP+ +  L +L  L +  N L  LP+++  L N
Sbjct: 194 LKTLPKEIG-QLKDLQHLSLRNNQLTILPKEIEQLKNLLTLSSDNNQLTVLPKEIGLLQN 252

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L  L++  N   L+TLP  +G L +L EL +S N++ TLP  +G L+ L+ LSL+ N L 
Sbjct: 253 LVTLDLRNN--QLKTLPKEVGQLKNLRELYLSANQLKTLPKEVGQLKNLRDLSLDNNQLE 310

Query: 189 SPPMDV 194
           + P +V
Sbjct: 311 TLPKEV 316



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 62/101 (61%), Gaps = 1/101 (0%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N++ L   +NQL  LP  IG L  L  LD+  N L++LPK +   ++L EL  + N+
Sbjct: 226 QLKNLLTLSSDNNQLTVLPKEIGLLQNLVTLDLRNNQLKTLPKEVGQLKNLRELYLSANQ 285

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           L+ LP  +G +L NL+ LS++ N++  LP+ +  L +LR L
Sbjct: 286 LKTLPKEVG-QLKNLRDLSLDNNQLETLPKEVGQLKNLRWL 325



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 60/97 (61%), Gaps = 3/97 (3%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V LD+ +NQLK LP  +G L  L+ L +S N L++LPK +   ++L +L+ + N+L
Sbjct: 250 LQNLVTLDLRNNQLKTLPKEVGQLKNLRELYLSANQLKTLPKEVGQLKNLRDLSLDNNQL 309

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSL 106
             LP  +G +L NL+ L ++ N   ILP+ L  +  L
Sbjct: 310 ETLPKEVG-QLKNLRWLFLDANP--ILPKKLKRIGKL 343



 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVLD R   L  LP+++  L NL  L +  N   L TLP  IGLL +L 
Sbjct: 13  LTKALQNPLDVRVLDLREQKLTILPKEIWQLKNLRELRLDNN--QLTTLPKEIGLLQNLK 70

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L +  N++T LP  IG L+ L+ L L  N L + P ++
Sbjct: 71  ILHLYANQLTILPKEIGQLKNLEYLDLNNNQLTTLPKEI 109


>gi|55728731|emb|CAH91105.1| hypothetical protein [Pongo abelii]
          Length = 582

 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 112/196 (57%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+   L  +  L ++SN+L+ LP  +GCL  L  L +S N L SLP +++N + L 
Sbjct: 114 ILPSSI-KELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLR 172

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKLR++P  + + L +L TL +  N+I  + + + +L+ L +L  R N +K LP
Sbjct: 173 MLDLRHNKLREIPSVV-YRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLP 231

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG    +  LD+ +N++  LPD+IG L  L +L
Sbjct: 232 AEIGELCNLITLDVAHN--QLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRL 289

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N L + P  + +
Sbjct: 290 GLRYNRLSAIPRSLAK 305



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 102/185 (55%), Gaps = 12/185 (6%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  +  L+   N+L  LPD
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEVLN 133
           TIG  L +L  L +  N++  +P+SL   ++L  L+   N + +LPE  L +L+ L  L 
Sbjct: 279 TIG-NLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLT 337

Query: 134 ISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNPLV 188
           +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N L 
Sbjct: 338 LARNCFQL-----YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLGKLNMKDNQLT 392

Query: 189 SPPMD 193
           S P+D
Sbjct: 393 SLPLD 397



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 90/160 (56%), Gaps = 2/160 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           ++V L++ +NQL  +P  +  L  L+VL +S NLL+ LP  + N R L EL+   NKL  
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ I + L +++ L +  N++  LP+ + HLT+L  L    N L  LPE++  L NLE 
Sbjct: 463 LPNEIAY-LKDIQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEE 521

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           L ++ N   L +LP+ + L   L  + +    ++ LP  I
Sbjct: 522 LYLNDN-PNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 560



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 97/177 (54%), Gaps = 8/177 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 357 IYSLNMEHNRINKIP--FGIFSRAKVLGKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  L +L  LR LD   N L+SLP ++  L ++
Sbjct: 415 TKIPEDVSG-LVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDI 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           + L ++ N   L TLP  IG L +L  L +  N +T LP+ IG L  L++L L  NP
Sbjct: 474 QKLVLTNN--QLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNP 528



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 109/230 (47%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N+L  LP++IG LS L  L +  N L ++P+++  C +LEELN   N +  L
Sbjct: 263 ITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTL 322

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+++   L+ L +L++  NC                                        
Sbjct: 323 PESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLG 382

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N L  +PED+  L++LEVL +S N   L+ L
Sbjct: 383 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKL 440

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ +G L  L ELD+  NK+ +LP+ I  L+ +QKL L  N L + P  +
Sbjct: 441 PHGLGNLRKLRELDLEENKLESLPNEIAYLKDIQKLVLTNNQLTTLPRGI 490



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 97/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +PESL + L+ +  L +  N  +  P       S +  L++  N +  +P  I    + L
Sbjct: 322 LPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL 381

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP   G    ++  L++  N++  +P+ ++ L SL VL    N LK L
Sbjct: 382 GKLNMKDNQLTSLPLDFG-TWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  L NL  L  L++ +N   LE+LP  I  L  + +L ++ N++TTLP  IG L  L  
Sbjct: 441 PHGLGNLRKLRELDLEEN--KLESLPNEIAYLKDIQKLVLTNNQLTTLPRGIGHLTNLTH 498

Query: 180 LSLEGNPLVSPPMDV 194
           L L  N L   P ++
Sbjct: 499 LGLGENLLTHLPEEI 513



 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L ++   I ILP S+  LT L  L    N L+SLP ++  L+NL  L +S+N   L +LP
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLP 162

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            S+  L  L  LD+ +NK+  +P  +  L  L  L L  N + +   D+
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 211


>gi|417765321|ref|ZP_12413285.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352503|gb|EJP04688.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 595

 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 109/184 (59%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++   +L  LP  IG L  L+ L++  NLL +LPK I    +L+EL+   N+L 
Sbjct: 48  LDVRVLNLSGEKLTALPKDIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
             P  I  EL  L++L ++ N+++ILP  +  L +L+ L    N L + P+++  L NL+
Sbjct: 108 TFPAVI-VELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +S+N   L  LP  IG L +L  LD+  N+ TTLP  IG L+ LQ L+L+ N L + 
Sbjct: 167 KLWLSEN--RLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATL 224

Query: 191 PMDV 194
           P+++
Sbjct: 225 PVEI 228



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 102/183 (55%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L+++      LP  I  L  LK L +  N L+++P  I   ++LE LN   N+L +
Sbjct: 377 NLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELER 436

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ LS++ N + I P  +  L  L+ LD  +N   + P+++  L NL+ 
Sbjct: 437 LPKEIG-QLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQT 495

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LN+ +N   L  LP  I  L +L ELD++ N+ T LP  IG L+KLQ L L  N L + P
Sbjct: 496 LNLQRN--QLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP 553

Query: 192 MDV 194
            ++
Sbjct: 554 TEI 556



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 103/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQL   P  I  L KL+ LD+S N L  LP  I   ++L++L    N
Sbjct: 91  GQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKN 150

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL   P  IG +L NL+ L ++ N++  LP+ +  L +L+ LD + N   +LP+++  L 
Sbjct: 151 KLTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQ 209

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+  N   L TLP  IG L +L EL +  N++   P  IG L+ LQ L    N L
Sbjct: 210 NLQTLNLQDN--QLATLPVEIGQLQNLQELYLRNNRLIVFPKEIGQLQNLQMLCSPENRL 267

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 268 TALPKEM 274



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 103/178 (57%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +RL N+  L +  N LK +P+ IG L  L+ L++  N LE LPK I   R+L++L+ + N
Sbjct: 396 SRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQN 455

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+  P  I  +L  L+ L ++ N+    P+ +  L +L+ L+ + N L +LP ++E L 
Sbjct: 456 TLKIFPAEIE-QLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLK 514

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ L+++ N      LP  IG L  L  LD+  N++TTLP  IG L+ LQ L L+ N
Sbjct: 515 NLQELDLNDN--QFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 570



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 71/197 (36%), Positives = 107/197 (54%), Gaps = 9/197 (4%)

Query: 4   ESLTA------RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCR 57
           E LTA      +L N+  L++  N L  LP  IG L  L+ LD+  N L + P  I   +
Sbjct: 58  EKLTALPKDIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQ 117

Query: 58  SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK 117
            LE L+ + N+L  LP+ IG  L NL+ L +  NK+   P+ +  L +L+ L    N L 
Sbjct: 118 KLESLDLSENRLIILPNEIG-RLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLT 176

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
           +LP+++  L NL+ L++  N     TLP  IG L +L  L++  N++ TLP  IG L+ L
Sbjct: 177 ALPKEIGQLKNLQTLDLQDN--QFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNL 234

Query: 178 QKLSLEGNPLVSPPMDV 194
           Q+L L  N L+  P ++
Sbjct: 235 QELYLRNNRLIVFPKEI 251



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 100/180 (55%), Gaps = 3/180 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  L ++ N+L   P  IG L  L+ L +S N L +LPK I   ++L+ L+   N
Sbjct: 137 GRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDN 196

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP  IG +L NL+TL++  N++  LP  +  L +L+ L  R N L   P+++  L 
Sbjct: 197 QFTTLPKEIG-QLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLIVFPKEIGQLQ 255

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L   +N   L  LP  +G L +L  L++  N++T  P  IG L+ LQ L L  NPL
Sbjct: 256 NLQMLCSPEN--RLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPL 313



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 99/178 (55%), Gaps = 8/178 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  N+L  LP  IG L  L+ LD+  N   +LPK I   ++L+ LN   N
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDN 219

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +  N++++ P+ +  L +L++L +  N L +LP+++  L 
Sbjct: 220 QLATLPVEIG-QLQNLQELYLRNNRLIVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQ 278

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ LN+  N   L   P  IG L +L +L++  N     P S+   +++QKL  + N
Sbjct: 279 NLQTLNLVNN--RLTVFPKEIGQLQNLQDLELLMN-----PLSLKERKRIQKLFPDSN 329



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 103/238 (43%), Gaps = 53/238 (22%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L    N+L  LP  +G L  L+ L++  N L   PK I   ++L++L    N
Sbjct: 252 GQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMN 311

Query: 68  KL---------RQLPDT------------------------IGFEL-INLKTLSINCNKI 93
            L         +  PD+                          FEL +  K  S +  K+
Sbjct: 312 PLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKV 371

Query: 94  VI-----------------LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQ 136
           ++                 LP+ ++ L +L+ L   LN LK++P ++  L NLE LN+  
Sbjct: 372 ILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEA 431

Query: 137 NFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           N   LE LP  IG L +L +L +  N +   P  I  L+KLQKL L  N   + P ++
Sbjct: 432 N--ELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEI 487



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L + L+N +++ VLN+S   + L  LP  IG L +L EL++ +N +TTLP  IG L  
Sbjct: 38  RDLTKALQNPLDVRVLNLS--GEKLTALPKDIGQLKNLQELNLKWNLLTTLPKEIGQLEN 95

Query: 177 LQKLSLEGNPLVSPPMDVVE 196
           LQ+L L  N L + P  +VE
Sbjct: 96  LQELDLRDNQLATFPAVIVE 115


>gi|332212811|ref|XP_003255512.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Nomascus
           leucogenys]
 gi|441600055|ref|XP_004087585.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 2 [Nomascus
           leucogenys]
          Length = 582

 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 112/196 (57%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+   L  +  L ++SN+L+ LP  +GCL  L  L +S N L SLP +++N + L 
Sbjct: 114 ILPSSI-KELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLR 172

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKLR++P  + + L +L TL +  N+I  + + + +L+ L +L  R N +K LP
Sbjct: 173 MLDLRHNKLREIPSVV-YRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLP 231

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG    +  LD+ +N++  LPD+IG L  L +L
Sbjct: 232 AEIGELCNLITLDVAHN--QLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRL 289

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N L + P  + +
Sbjct: 290 GLRYNRLSAIPRSLAK 305



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 102/185 (55%), Gaps = 12/185 (6%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  +  L+   N+L  LPD
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEVLN 133
           TIG  L +L  L +  N++  +P+SL   ++L  L+   N + +LPE  L +L+ L  L 
Sbjct: 279 TIG-NLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLT 337

Query: 134 ISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNPLV 188
           +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N L 
Sbjct: 338 LARNCFQL-----YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLT 392

Query: 189 SPPMD 193
           S P+D
Sbjct: 393 SLPLD 397



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 2/160 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           ++V L++ +NQL  +P  +  L  L+VL +S NLL+ LP  + N R L EL+   NKL  
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ I + L +L+ L +  N++  LP+ + HLT+L  L    N L  LPE++  L NLE 
Sbjct: 463 LPNEIAY-LKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEE 521

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           L ++ N   L +LP+ + L   L  + +    ++ LP  I
Sbjct: 522 LYLNDN-PNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 560



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 8/177 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 357 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  L +L  LR LD   N L+SLP ++  L +L
Sbjct: 415 TKIPEDVSG-LVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           + L ++ N   L TLP  IG L +L  L +  N +T LP+ IG L  L++L L  NP
Sbjct: 474 QKLVLTNN--QLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNP 528



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N+L  LP++IG LS L  L +  N L ++P+++  C +LEELN   N +  L
Sbjct: 263 ITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTL 322

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+++   L+ L +L++  NC                                        
Sbjct: 323 PESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLS 382

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N L  +PED+  L++LEVL +S N   L+ L
Sbjct: 383 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKL 440

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ +G L  L ELD+  NK+ +LP+ I  L+ LQKL L  N L + P  +
Sbjct: 441 PHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 97/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +PESL + L+ +  L +  N  +  P       S +  L++  N +  +P  I    + L
Sbjct: 322 LPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL 381

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP   G    ++  L++  N++  +P+ ++ L SL VL    N LK L
Sbjct: 382 SKLNMKDNQLTSLPLDFG-TWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  L NL  L  L++ +N   LE+LP  I  L  L +L ++ N++TTLP  IG L  L  
Sbjct: 441 PHGLGNLRKLRELDLEEN--KLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTH 498

Query: 180 LSLEGNPLVSPPMDV 194
           L L  N L   P ++
Sbjct: 499 LGLGENLLTHLPEEI 513



 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L ++   I ILP S+  LT L  L    N L+SLP ++  L+NL  L +S+N   L +LP
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLP 162

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            S+  L  L  LD+ +NK+  +P  +  L  L  L L  N + +   D+
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 211


>gi|41281398|ref|NP_031399.2| leucine-rich repeat protein SHOC-2 isoform 1 [Homo sapiens]
 gi|114632804|ref|XP_521602.2| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 2 [Pan
           troglodytes]
 gi|149689670|ref|XP_001496623.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Equus caballus]
 gi|194042023|ref|XP_001927528.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Sus scrofa]
 gi|296221216|ref|XP_002756642.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Callithrix
           jacchus]
 gi|332835019|ref|XP_003312812.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Pan troglodytes]
 gi|395828086|ref|XP_003787217.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Otolemur garnettii]
 gi|397510493|ref|XP_003825630.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Pan
           paniscus]
 gi|397510495|ref|XP_003825631.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 2 [Pan
           paniscus]
 gi|426366199|ref|XP_004050149.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Gorilla gorilla
           gorilla]
 gi|14423936|sp|Q9UQ13.2|SHOC2_HUMAN RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|166977684|sp|Q5RAV5.2|SHOC2_PONAB RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|3252979|gb|AAC39856.1| Ras-binding protein SUR-8 [Homo sapiens]
 gi|3293320|gb|AAC25698.1| leucine-rich repeat protein SHOC-2 [Homo sapiens]
 gi|29792199|gb|AAH50445.1| Soc-2 suppressor of clear homolog (C. elegans) [Homo sapiens]
 gi|119569933|gb|EAW49548.1| soc-2 suppressor of clear homolog (C. elegans), isoform CRA_a [Homo
           sapiens]
 gi|410217418|gb|JAA05928.1| soc-2 suppressor of clear homolog [Pan troglodytes]
 gi|410217420|gb|JAA05929.1| soc-2 suppressor of clear homolog [Pan troglodytes]
 gi|410267376|gb|JAA21654.1| soc-2 suppressor of clear homolog [Pan troglodytes]
 gi|410302564|gb|JAA29882.1| soc-2 suppressor of clear homolog [Pan troglodytes]
 gi|410333721|gb|JAA35807.1| soc-2 suppressor of clear homolog [Pan troglodytes]
 gi|417402990|gb|JAA48322.1| Putative leucine-rich repeat protein shoc-2 [Desmodus rotundus]
 gi|431895441|gb|ELK04957.1| Leucine-rich repeat protein SHOC-2 [Pteropus alecto]
          Length = 582

 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 112/196 (57%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+   L  +  L ++SN+L+ LP  +GCL  L  L +S N L SLP +++N + L 
Sbjct: 114 ILPSSI-KELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLR 172

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKLR++P  + + L +L TL +  N+I  + + + +L+ L +L  R N +K LP
Sbjct: 173 MLDLRHNKLREIPSVV-YRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLP 231

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG    +  LD+ +N++  LPD+IG L  L +L
Sbjct: 232 AEIGELCNLITLDVAHN--QLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRL 289

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N L + P  + +
Sbjct: 290 GLRYNRLSAIPRSLAK 305



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 102/185 (55%), Gaps = 12/185 (6%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  +  L+   N+L  LPD
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEVLN 133
           TIG  L +L  L +  N++  +P+SL   ++L  L+   N + +LPE  L +L+ L  L 
Sbjct: 279 TIG-NLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLT 337

Query: 134 ISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNPLV 188
           +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N L 
Sbjct: 338 LARNCFQL-----YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLT 392

Query: 189 SPPMD 193
           S P+D
Sbjct: 393 SLPLD 397



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 2/160 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           ++V L++ +NQL  +P  +  L  L+VL +S NLL+ LP  + N R L EL+   NKL  
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ I + L +L+ L +  N++  LP+ + HLT+L  L    N L  LPE++  L NLE 
Sbjct: 463 LPNEIAY-LKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEE 521

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           L ++ N   L +LP+ + L   L  + +    ++ LP  I
Sbjct: 522 LYLNDN-PNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 560



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 8/177 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 357 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  L +L  LR LD   N L+SLP ++  L +L
Sbjct: 415 TKIPEDVSG-LVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           + L ++ N   L TLP  IG L +L  L +  N +T LP+ IG L  L++L L  NP
Sbjct: 474 QKLVLTNN--QLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNP 528



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N+L  LP++IG LS L  L +  N L ++P+++  C +LEELN   N +  L
Sbjct: 263 ITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTL 322

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+++   L+ L +L++  NC                                        
Sbjct: 323 PESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLS 382

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N L  +PED+  L++LEVL +S N   L+ L
Sbjct: 383 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKL 440

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ +G L  L ELD+  NK+ +LP+ I  L+ LQKL L  N L + P  +
Sbjct: 441 PHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 97/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +PESL + L+ +  L +  N  +  P       S +  L++  N +  +P  I    + L
Sbjct: 322 LPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL 381

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP   G    ++  L++  N++  +P+ ++ L SL VL    N LK L
Sbjct: 382 SKLNMKDNQLTSLPLDFG-TWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  L NL  L  L++ +N   LE+LP  I  L  L +L ++ N++TTLP  IG L  L  
Sbjct: 441 PHGLGNLRKLRELDLEEN--KLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTH 498

Query: 180 LSLEGNPLVSPPMDV 194
           L L  N L   P ++
Sbjct: 499 LGLGENLLTHLPEEI 513



 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L ++   I ILP S+  LT L  L    N L+SLP ++  L+NL  L +S+N   L +LP
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLP 162

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            S+  L  L  LD+ +NK+  +P  +  L  L  L L  N + +   D+
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 211


>gi|302784931|ref|XP_002974237.1| hypothetical protein SELMODRAFT_6505 [Selaginella moellendorffii]
 gi|300157835|gb|EFJ24459.1| hypothetical protein SELMODRAFT_6505 [Selaginella moellendorffii]
          Length = 147

 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/149 (42%), Positives = 92/149 (61%), Gaps = 2/149 (1%)

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+A+FN+L  L  + G  L  LK L +  NK+  LP+S+  + SL  L+ + N L SLP 
Sbjct: 1   LDASFNQLEHLFLSFGANLPRLKRLHLQLNKLKALPESIGKMASLVHLEVQFNKLVSLPP 60

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + +L +L+ L+ S NF    ++P SIG   SL  LD+SYN+I  LP S+G L +LQ+L 
Sbjct: 61  TIGDLKSLQTLDASGNFS--TSVPDSIGYASSLTYLDLSYNQIARLPLSVGNLTQLQELK 118

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKM 210
           L  NPLV PP++V E    AV  Y+S+++
Sbjct: 119 LFHNPLVVPPLEVAEHSTKAVVEYMSQEL 147



 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 63/105 (60%), Gaps = 1/105 (0%)

Query: 5   SLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNA 64
           S  A L  +  L +  N+LK LP SIG ++ L  L+V  N L SLP TI + +SL+ L+A
Sbjct: 14  SFGANLPRLKRLHLQLNKLKALPESIGKMASLVHLEVQFNKLVSLPPTIGDLKSLQTLDA 73

Query: 65  NFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           + N    +PD+IG+   +L  L ++ N+I  LP S+ +LT L+ L
Sbjct: 74  SGNFSTSVPDSIGYA-SSLTYLDLSYNQIARLPLSVGNLTQLQEL 117


>gi|158259127|dbj|BAF85522.1| unnamed protein product [Homo sapiens]
          Length = 582

 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 112/196 (57%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+   L  +  L ++SN+L+ LP  +GCL  L  L +S N L SLP +++N + L 
Sbjct: 114 ILPSSI-KELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLR 172

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKLR++P  + + L +L TL +  N+I  + + + +L+ L +L  R N +K LP
Sbjct: 173 MLDLRHNKLREIPSVV-YRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLP 231

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG    +  LD+ +N++  LPD+IG L  L +L
Sbjct: 232 AEIGELCNLITLDVAHN--QLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRL 289

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N L + P  + +
Sbjct: 290 GLRYNRLSAIPRSLAK 305



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 102/185 (55%), Gaps = 12/185 (6%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  +  L+   N+L  LPD
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEVLN 133
           TIG  L +L  L +  N++  +P+SL   ++L  L+   N + +LPE  L +L+ L  L 
Sbjct: 279 TIG-NLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLT 337

Query: 134 ISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNPLV 188
           +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N L 
Sbjct: 338 LARNCFQL-----YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLT 392

Query: 189 SPPMD 193
           S P+D
Sbjct: 393 SLPLD 397



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 2/160 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           ++V L++ +NQL  +P  +  L  L+VL +S NLL+ LP  + N R L EL+   NKL  
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ I + L +L+ L +  N++  LP+ + HLT+L  L    N L  LPE++  L NLE 
Sbjct: 463 LPNEIAY-LKDLQELVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEE 521

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           L ++ N   L +LP+ + L   L  + +    ++ LP  I
Sbjct: 522 LYLNDN-PNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 560



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 8/177 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 357 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  L +L  LR LD   N L+SLP ++  L +L
Sbjct: 415 TKIPEDVSG-LVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           + L ++ N   L TLP  IG L +L  L +  N +T LP+ IG L  L++L L  NP
Sbjct: 474 QELVLTNN--QLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNP 528



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 109/230 (47%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N+L  LP++IG LS L  L +  N L ++P+++  C +LEELN   N +  L
Sbjct: 263 ITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTL 322

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+++   L+ L +L++  NC                                        
Sbjct: 323 PESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLS 382

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N L  +PED+  L++LEVL +S N   L+ L
Sbjct: 383 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKL 440

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ +G L  L ELD+  NK+ +LP+ I  L+ LQ+L L  N L + P  +
Sbjct: 441 PHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQELVLTNNQLTTLPRGI 490



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 97/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +PESL + L+ +  L +  N  +  P       S +  L++  N +  +P  I    + L
Sbjct: 322 LPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL 381

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP   G    ++  L++  N++  +P+ ++ L SL VL    N LK L
Sbjct: 382 SKLNMKDNQLTSLPLDFG-TWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  L NL  L  L++ +N   LE+LP  I  L  L EL ++ N++TTLP  IG L  L  
Sbjct: 441 PHGLGNLRKLRELDLEEN--KLESLPNEIAYLKDLQELVLTNNQLTTLPRGIGHLTNLTH 498

Query: 180 LSLEGNPLVSPPMDV 194
           L L  N L   P ++
Sbjct: 499 LGLGENLLTHLPEEI 513



 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L ++   I ILP S+  LT L  L    N L+SLP ++  L+NL  L +S+N   L +LP
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLP 162

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            S+  L  L  LD+ +NK+  +P  +  L  L  L L  N + +   D+
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 211


>gi|40788390|dbj|BAA74885.2| KIAA0862 protein [Homo sapiens]
          Length = 584

 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 112/196 (57%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+   L  +  L ++SN+L+ LP  +GCL  L  L +S N L SLP +++N + L 
Sbjct: 116 ILPSSI-KELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLR 174

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKLR++P  + + L +L TL +  N+I  + + + +L+ L +L  R N +K LP
Sbjct: 175 MLDLRHNKLREIPSVV-YRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLP 233

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG    +  LD+ +N++  LPD+IG L  L +L
Sbjct: 234 AEIGELCNLITLDVAHN--QLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRL 291

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N L + P  + +
Sbjct: 292 GLRYNRLSAIPRSLAK 307



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 102/185 (55%), Gaps = 12/185 (6%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  +  L+   N+L  LPD
Sbjct: 221 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 280

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEVLN 133
           TIG  L +L  L +  N++  +P+SL   ++L  L+   N + +LPE  L +L+ L  L 
Sbjct: 281 TIG-NLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLT 339

Query: 134 ISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNPLV 188
           +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N L 
Sbjct: 340 LARNCFQL-----YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLT 394

Query: 189 SPPMD 193
           S P+D
Sbjct: 395 SLPLD 399



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 89/160 (55%), Gaps = 2/160 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           ++V L++ +NQL  +P  +  L  L+VL +S NLL+ LP  + N R L EL+   NKL  
Sbjct: 405 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 464

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ I + L +L+ L +  N++  LP+ + HLT+L  L    N L  LPE++  L NLE 
Sbjct: 465 LPNEIAY-LKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEE 523

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           L ++ N   L +LP  + L   L  + +    ++ LP  I
Sbjct: 524 LYLNDN-PNLHSLPLELALCSKLSIMSIENCPLSHLPPQI 562



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 103/187 (55%), Gaps = 9/187 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 359 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 416

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  L +L  LR LD   N L+SLP ++  L +L
Sbjct: 417 TKIPEDVSG-LVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 475

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP-LV 188
           + L ++ N   L TLP  IG L +L  L +  N +T LP+ IG L  L++L L  NP L 
Sbjct: 476 QKLVLTNN--QLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLH 533

Query: 189 SPPMDVV 195
           S P+++ 
Sbjct: 534 SLPLELA 540



 Score = 77.0 bits (188), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N+L  LP++IG LS L  L +  N L ++P+++  C +LEELN   N +  L
Sbjct: 265 ITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTL 324

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+++   L+ L +L++  NC                                        
Sbjct: 325 PESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLS 384

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N L  +PED+  L++LEVL +S N   L+ L
Sbjct: 385 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKL 442

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ +G L  L ELD+  NK+ +LP+ I  L+ LQKL L  N L + P  +
Sbjct: 443 PHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 492



 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L ++   I ILP S+  LT L  L    N L+SLP ++  L+NL  L +S+N   L +LP
Sbjct: 107 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLP 164

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            S+  L  L  LD+ +NK+  +P  +  L  L  L L  N + +   D+
Sbjct: 165 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 213


>gi|355562779|gb|EHH19373.1| hypothetical protein EGK_20064 [Macaca mulatta]
          Length = 582

 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 110/191 (57%), Gaps = 4/191 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+   L  +  L ++SN+L+ LP  +GCL  L  L +S N L SLP +++N + L 
Sbjct: 114 ILPSSI-KELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLR 172

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKLR++P  + + L +L TL +  N+I  + + + +L+ L +L  R N +K LP
Sbjct: 173 MLDLRHNKLREIPSVV-YRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLP 231

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG    +  LD+ +N++  LPD+IG L  L +L
Sbjct: 232 AEIGELCNLITLDVAHN--QLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRL 289

Query: 181 SLEGNPLVSPP 191
            L  N L + P
Sbjct: 290 GLRYNRLSAIP 300



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 2/160 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           ++V L++ +NQL  +P  +  L  L+VL +S NLL+ LP  + N R L EL+   NKL  
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ I + L +L+ L +  N++  LP+ + HLT+L  L    N L  LPE++  L NLE 
Sbjct: 463 LPNEIAY-LKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEE 521

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           L ++ N   L +LP+ + L   L  + +    ++ LP  I
Sbjct: 522 LYLNDN-PNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 560



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 8/177 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 357 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  L +L  LR LD   N L+SLP ++  L +L
Sbjct: 415 TKIPEDVSG-LVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           + L ++ N   L TLP  IG L +L  L +  N +T LP+ IG L  L++L L  NP
Sbjct: 474 QKLVLTNN--QLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNP 528



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 102/230 (44%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRS-------------- 58
           +  LD+  N+L  LP++IG LS L  L +  N L ++P+++  C +              
Sbjct: 263 ITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLSKCSALEELNLENNNISTL 322

Query: 59  ----------------------------------LEELNANFNKLRQLPDTIGFELINLK 84
                                             +  LN   N++ ++P  I      L 
Sbjct: 323 PXSLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLS 382

Query: 85  TLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
            L++  N++  LP      TS+  L+   N L  +PED+  L++LEVL +S N   L+ L
Sbjct: 383 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKL 440

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ +G L  L ELD+  NK+ +LP+ I  L+ LQKL L  N L + P  +
Sbjct: 441 PHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 111/254 (43%), Gaps = 77/254 (30%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  +  L+   N+L  LPD
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD------------------------ 110
           TIG  L +L  L +  N++  +P+SL+  ++L  L+                        
Sbjct: 279 TIG-NLSSLSRLGLRYNRLSAIPRSLSKCSALEELNLENNNISTLPXSLLSSLVKLNSLT 337

Query: 111 -ARLNCLKSLPE------------DLE-NLIN------------LEVLNISQNFQYLETL 144
            AR NC +  P             ++E N IN            L  LN+  N   L +L
Sbjct: 338 LAR-NCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDN--QLTSL 394

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSI-----------------------GCLRKLQKLS 181
           P   G   S+VEL+++ N++T +P+ +                       G LRKL++L 
Sbjct: 395 PLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELD 454

Query: 182 LEGNPLVSPPMDVV 195
           LE N L S P ++ 
Sbjct: 455 LEENKLESLPNEIA 468



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 4/163 (2%)

Query: 33  LSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCN 91
            S +  L++  N +  +P  I    + L +LN   N+L  LP   G    ++  L++  N
Sbjct: 354 FSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFG-TWTSMVELNLATN 412

Query: 92  KIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLL 151
           ++  +P+ ++ L SL VL    N LK LP  L NL  L  L++ +N   LE+LP  I  L
Sbjct: 413 QLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN--KLESLPNEIAYL 470

Query: 152 MSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             L +L ++ N++TTLP  IG L  L  L L  N L   P ++
Sbjct: 471 KDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEI 513



 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L ++   I ILP S+  LT L  L    N L+SLP ++  L+NL  L +S+N   L +LP
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLP 162

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            S+  L  L  LD+ +NK+  +P  +  L  L  L L  N + +   D+
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 211


>gi|379731535|ref|YP_005323731.1| putative lipoprotein [Saprospira grandis str. Lewin]
 gi|378577146|gb|AFC26147.1| putative lipoprotein [Saprospira grandis str. Lewin]
          Length = 526

 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/180 (38%), Positives = 108/180 (60%), Gaps = 5/180 (2%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L++  N L  LP +IG    L+ L +S N LE+LPK I  C++LE+L    N L  LP++
Sbjct: 233 LNLERNSLNSLPPTIGTWKNLRELRLSENNLETLPKAIGQCQALEQLIIQDNALATLPES 292

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           +G +L  LKTL++  N++  LP  L    +LR+L    N L+ LPE++ NL  L+VLN+ 
Sbjct: 293 MG-QLKQLKTLALQGNQLERLPAGLMQAEALRILRLGDNQLRQLPEEIGNLKQLKVLNLG 351

Query: 136 QN----FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           ++       L +LP S+G L  L EL V+ N++++LP S+G  + ++K+ L  N L + P
Sbjct: 352 EDPLSEGNQLVSLPNSLGQLQQLEELIVNNNRLSSLPKSLGNCQSIRKIELINNQLRTLP 411



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/210 (36%), Positives = 106/210 (50%), Gaps = 22/210 (10%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVS------GNLLESLPKTIENCRSLEELNANFNK 68
           +L +  NQL+ LP  IG L +LKVL++       GN L SLP ++   + LEEL  N N+
Sbjct: 324 ILRLGDNQLRQLPEEIGNLKQLKVLNLGEDPLSEGNQLVSLPNSLGQLQQLEELIVNNNR 383

Query: 69  LRQLPDTIG-------FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  LP ++G        ELIN        N++  LP S   L  L VL  R N L++LP+
Sbjct: 384 LSSLPKSLGNCQSIRKIELIN--------NQLRTLPSSFGQLEKLEVLLLRGNRLQALPD 435

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L  L +LE L++S N   L  LP  IG L  L  LD+S   I  LP SI  L  L+ L 
Sbjct: 436 SLSGLRSLEWLDLSNN-NRLRALPEDIGRLDQLKNLDISGTGIKHLPKSIENLYSLEFLV 494

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMN 211
           +    +    +  + + L ++  YL EK N
Sbjct: 495 IHKGQISEEELRRIHKSLPSLTTYLVEKEN 524



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 5/176 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           NQ     ++I  L KL+ L +SG    +LP  +   +SL++L+   N    L  +I  +L
Sbjct: 148 NQGGRFSSAIRKLPKLENLILSG--CSTLPWPLYQLKSLKKLSIELNTEITLSRSIN-QL 204

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
             L+ LS   + +  L  ++     L+ L+   N L SLP  +    NL  L +S+N   
Sbjct: 205 SQLEELSWTYSSLERLDGNMAIFKRLKRLNLERNSLNSLPPTIGTWKNLRELRLSEN--N 262

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           LETLP +IG   +L +L +  N + TLP+S+G L++L+ L+L+GN L   P  +++
Sbjct: 263 LETLPKAIGQCQALEQLIIQDNALATLPESMGQLKQLKTLALQGNQLERLPAGLMQ 318



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 73/134 (54%), Gaps = 3/134 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P SL  +L  +  L V++N+L  LP S+G    ++ +++  N L +LP +      LE 
Sbjct: 364 LPNSL-GQLQQLEELIVNNNRLSSLPKSLGNCQSIRKIELINNQLRTLPSSFGQLEKLEV 422

Query: 62  LNANFNKLRQLPDTI-GFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           L    N+L+ LPD++ G   +    LS N N++  LP+ +  L  L+ LD     +K LP
Sbjct: 423 LLLRGNRLQALPDSLSGLRSLEWLDLS-NNNRLRALPEDIGRLDQLKNLDISGTGIKHLP 481

Query: 121 EDLENLINLEVLNI 134
           + +ENL +LE L I
Sbjct: 482 KSIENLYSLEFLVI 495



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 3/170 (1%)

Query: 25  CLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLK 84
            LP  +  L  LK L +  N   +L ++I     LEEL+  ++ L +L   +      LK
Sbjct: 173 TLPWPLYQLKSLKKLSIELNTEITLSRSINQLSQLEELSWTYSSLERLDGNMAI-FKRLK 231

Query: 85  TLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
            L++  N +  LP ++    +LR L    N L++LP+ +     LE L I  N   L TL
Sbjct: 232 RLNLERNSLNSLPPTIGTWKNLRELRLSENNLETLPKAIGQCQALEQLIIQDN--ALATL 289

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P S+G L  L  L +  N++  LP  +     L+ L L  N L   P ++
Sbjct: 290 PESMGQLKQLKTLALQGNQLERLPAGLMQAEALRILRLGDNQLRQLPEEI 339


>gi|55733633|emb|CAH93493.1| hypothetical protein [Pongo abelii]
          Length = 582

 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 112/196 (57%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+   L  +  L ++SN+L+ LP  +GCL  L  L +S N L SLP +++N + L 
Sbjct: 114 ILPSSI-KELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLR 172

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKLR++P  + + L +L TL +  N+I  + + + +L+ L +L  R N +K LP
Sbjct: 173 MLDLRHNKLREIPSVV-YRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLP 231

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG    +  LD+ +N++  LPD+IG L  L +L
Sbjct: 232 AEIGELCNLITLDVAHN--QLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRL 289

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N L + P  + +
Sbjct: 290 GLRYNRLSAIPRSLAK 305



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 102/185 (55%), Gaps = 12/185 (6%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  +  L+   N+L  LPD
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEVLN 133
           TIG  L +L  L +  N++  +P+SL   ++L  L+   N + +LPE  L +L+ L  L 
Sbjct: 279 TIG-NLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLT 337

Query: 134 ISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNPLV 188
           +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N L 
Sbjct: 338 LARNCFQL-----YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLT 392

Query: 189 SPPMD 193
           S P+D
Sbjct: 393 SLPLD 397



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 89/160 (55%), Gaps = 2/160 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           ++V L++ +NQ   +P  +  L  L+VL +S NLL+ LP  + N R L EL+   NKL  
Sbjct: 403 SMVELNLATNQPTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRELRELDLEENKLES 462

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ I + L +L+ L +  N++  LP+ + HLT+L  L    N L  LPE++  L NLE 
Sbjct: 463 LPNEIAY-LKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEE 521

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           L ++ N   L +LP+ + L   L  + +    ++ LP  I
Sbjct: 522 LYLNDN-PNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 560



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 96/177 (54%), Gaps = 8/177 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+ 
Sbjct: 357 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQP 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  L +L  LR LD   N L+SLP ++  L +L
Sbjct: 415 TKIPEDVSG-LVSLEVLILSNNLLKKLPHGLGNLRELRELDLEENKLESLPNEIAYLKDL 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           + L ++ N   L TLP  IG L +L  L +  N +T LP+ IG L  L++L L  NP
Sbjct: 474 QKLVLTNN--QLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNP 528



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 108/230 (46%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N+L  LP++IG LS L  L +  N L ++P+++  C +LEELN   N +  L
Sbjct: 263 ITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTL 322

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+++   L+ L +L++  NC                                        
Sbjct: 323 PESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLS 382

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N    +PED+  L++LEVL +S N   L+ L
Sbjct: 383 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQPTKIPEDVSGLVSLEVLILSNNL--LKKL 440

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ +G L  L ELD+  NK+ +LP+ I  L+ LQKL L  N L + P  +
Sbjct: 441 PHGLGNLRELRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 96/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +PESL + L+ +  L +  N  +  P       S +  L++  N +  +P  I    + L
Sbjct: 322 LPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL 381

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP   G    ++  L++  N+   +P+ ++ L SL VL    N LK L
Sbjct: 382 SKLNMKDNQLTSLPLDFG-TWTSMVELNLATNQPTKIPEDVSGLVSLEVLILSNNLLKKL 440

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  L NL  L  L++ +N   LE+LP  I  L  L +L ++ N++TTLP  IG L  L  
Sbjct: 441 PHGLGNLRELRELDLEEN--KLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTH 498

Query: 180 LSLEGNPLVSPPMDV 194
           L L  N L   P ++
Sbjct: 499 LGLGENLLTHLPEEI 513



 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L ++   I ILP S+  LT L  L    N L+SLP ++  L+NL  L +S+N   L +LP
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLP 162

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            S+  L  L  LD+ +NK+  +P  +  L  L  L L  N + +   D+
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 211


>gi|402881488|ref|XP_003904303.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Papio anubis]
          Length = 582

 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 110/191 (57%), Gaps = 4/191 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+   L  +  L ++SN+L+ LP  +GCL  L  L +S N L SLP +++N + L 
Sbjct: 114 ILPSSI-KELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLR 172

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKLR++P  + + L +L TL +  N+I  + + + +L+ L +L  R N +K LP
Sbjct: 173 MLDLRHNKLREIPSVV-YRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLP 231

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG    +  LD+ +N++  LPD+IG L  L +L
Sbjct: 232 AEIGELCNLITLDVAHN--QLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRL 289

Query: 181 SLEGNPLVSPP 191
            L  N L + P
Sbjct: 290 GLRYNRLSAIP 300



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 103/185 (55%), Gaps = 12/185 (6%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  +  L+   N+L  LPD
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEVLN 133
           TIG  L +L  L +  N++  +P+SL+  ++L  L+   N + +LPE  L +L+ L  L 
Sbjct: 279 TIG-NLSSLSRLGLRYNRLSAIPRSLSKCSALEELNLENNNISTLPESLLSSLVKLNSLT 337

Query: 134 ISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNPLV 188
           +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N L 
Sbjct: 338 LARNCFQL-----YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLT 392

Query: 189 SPPMD 193
           S P+D
Sbjct: 393 SLPLD 397



 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 2/160 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           ++V L++ +NQL  +P  +  L  L+VL +S NLL+ LP  + N R L EL+   NKL  
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNFRKLRELDLEENKLES 462

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ I + L +L+ L +  N++  LP+ + HLT+L  L    N L  LPE++  L NLE 
Sbjct: 463 LPNEIAY-LKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEE 521

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           L ++ N   L +LP+ + L   L  + +    ++ LP  I
Sbjct: 522 LYLNDN-PNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 560



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 96/177 (54%), Gaps = 8/177 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 357 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  L +   LR LD   N L+SLP ++  L +L
Sbjct: 415 TKIPEDVSG-LVSLEVLILSNNLLKKLPHGLGNFRKLRELDLEENKLESLPNEIAYLKDL 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           + L ++ N   L TLP  IG L +L  L +  N +T LP+ IG L  L++L L  NP
Sbjct: 474 QKLVLTNN--QLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNP 528



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 108/230 (46%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N+L  LP++IG LS L  L +  N L ++P+++  C +LEELN   N +  L
Sbjct: 263 ITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLSKCSALEELNLENNNISTL 322

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+++   L+ L +L++  NC                                        
Sbjct: 323 PESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLS 382

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N L  +PED+  L++LEVL +S N   L+ L
Sbjct: 383 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKL 440

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ +G    L ELD+  NK+ +LP+ I  L+ LQKL L  N L + P  +
Sbjct: 441 PHGLGNFRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 96/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +PESL + L+ +  L +  N  +  P       S +  L++  N +  +P  I    + L
Sbjct: 322 LPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL 381

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP   G    ++  L++  N++  +P+ ++ L SL VL    N LK L
Sbjct: 382 SKLNMKDNQLTSLPLDFG-TWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  L N   L  L++ +N   LE+LP  I  L  L +L ++ N++TTLP  IG L  L  
Sbjct: 441 PHGLGNFRKLRELDLEEN--KLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTH 498

Query: 180 LSLEGNPLVSPPMDV 194
           L L  N L   P ++
Sbjct: 499 LGLGENLLTHLPEEI 513



 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L ++   I ILP S+  LT L  L    N L+SLP ++  L+NL  L +S+N   L +LP
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLP 162

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            S+  L  L  LD+ +NK+  +P  +  L  L  L L  N + +   D+
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 211


>gi|428164461|gb|EKX33486.1| hypothetical protein GUITHDRAFT_81410 [Guillardia theta CCMP2712]
          Length = 493

 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 111/184 (60%), Gaps = 5/184 (2%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L  +V+DV  NQL+ LP +IG L +L+ L +  N +E+LP +I +  SL  L    N L 
Sbjct: 205 LKTLVVDV--NQLRTLPATIGALGQLRELQLGDNRIENLPASIGSLTSLNTLILTDNNLP 262

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
           ++P  IG+ L NL  LS++ N I  LP  +  L++LR L+   N L SLP  + +L  L+
Sbjct: 263 EIPAEIGY-LTNLTFLSLSGNPITSLPLEIGGLSALRALNLAKNSLISLPVSIGDLALLQ 321

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
           VL++ +N   LE LP SIG L +L +L + +N +T+LP  +G +  L +L L+GN L + 
Sbjct: 322 VLHLHEN--ELEALPESIGDLSALTDLRLDHNNLTSLPPEVGVMSSLTELLLDGNQLNTL 379

Query: 191 PMDV 194
           P+ +
Sbjct: 380 PLSI 383



 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/237 (34%), Positives = 115/237 (48%), Gaps = 49/237 (20%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +V L +  N LK LP SIG L  L++LD++ N+L SLP+T+   R + EL  N N+L  +
Sbjct: 67  LVTLTISHNLLKYLPTSIGNLPNLRILDLNHNMLRSLPQTVGFLRLMSELKCNANQLTTV 126

Query: 73  PDTIG----------------------FELINLKTLSINCNKIVILPQSLTHLTSLRVLD 110
           P TIG                        L  +K L +N N++  +P S+  +T L+ L+
Sbjct: 127 PTTIGECTALRQLDLSFNAISALPLEIGRLTKMKQLLLNNNRLDSIPASIGTMTLLQELN 186

Query: 111 ARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDS 170
              N LK LP +L N+  L+ L +  N   L TLP +IG L  L EL +  N+I  LP S
Sbjct: 187 LFENPLKGLPTELGNIQKLKTLVVDVN--QLRTLPATIGALGQLRELQLGDNRIENLPAS 244

Query: 171 IGCLRKLQK-----------------------LSLEGNPLVSPPMDVVEQGLSAVKG 204
           IG L  L                         LSL GNP+ S P+++   GLSA++ 
Sbjct: 245 IGSLTSLNTLILTDNNLPEIPAEIGYLTNLTFLSLSGNPITSLPLEI--GGLSALRA 299



 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 121/231 (52%), Gaps = 10/231 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P S+  +L NV  L +  NQL  LPN  G ++ L  L +S NLL+ LP +I N  +L  
Sbjct: 34  LPPSI-GQLNNVQSLALDFNQLNSLPNQFGDMTALVTLTISHNLLKYLPTSIGNLPNLRI 92

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ N N LR LP T+GF L  +  L  N N++  +P ++   T+LR LD   N + +LP 
Sbjct: 93  LDLNHNMLRSLPQTVGF-LRLMSELKCNANQLTTVPTTIGECTALRQLDLSFNAISALPL 151

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L  ++ L ++ N   L+++P SIG +  L EL++  N +  LP  +G ++KL+ L 
Sbjct: 152 EIGRLTKMKQLLLNNN--RLDSIPASIGTMTLLQELNLFENPLKGLPTELGNIQKLKTLV 209

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTF 232
           ++ N L + P  +         G L E    D++     + +G L    T 
Sbjct: 210 VDVNQLRTLPATI------GALGQLRELQLGDNRIENLPASIGSLTSLNTL 254



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 103/179 (57%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           + +  NQ+  LP SIG LS L  L V  N +  LP +I    +++ L  +FN+L  LP+ 
Sbjct: 1   MSIADNQIVHLPASIGMLSSLATLWVDHNQISELPPSIGQLNNVQSLALDFNQLNSLPNQ 60

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
            G ++  L TL+I+ N +  LP S+ +L +LR+LD   N L+SLP+ +  L  +  L  +
Sbjct: 61  FG-DMTALVTLTISHNLLKYLPTSIGNLPNLRILDLNHNMLRSLPQTVGFLRLMSELKCN 119

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L T+P +IG   +L +LD+S+N I+ LP  IG L K+++L L  N L S P  +
Sbjct: 120 AN--QLTTVPTTIGECTALRQLDLSFNAISALPLEIGRLTKMKQLLLNNNRLDSIPASI 176



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 105/187 (56%), Gaps = 3/187 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  N +  LP  IG L+K+K L ++ N L+S+P +I     L+ELN   N L+ LP  
Sbjct: 139 LDLSFNAISALPLEIGRLTKMKQLLLNNNRLDSIPASIGTMTLLQELNLFENPLKGLPTE 198

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           +G  +  LKTL ++ N++  LP ++  L  LR L    N +++LP  + +L +L  L ++
Sbjct: 199 LG-NIQKLKTLVVDVNQLRTLPATIGALGQLRELQLGDNRIENLPASIGSLTSLNTLILT 257

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            N   L  +P  IG L +L  L +S N IT+LP  IG L  L+ L+L  N L+S P+ + 
Sbjct: 258 DN--NLPEIPAEIGYLTNLTFLSLSGNPITSLPLEIGGLSALRALNLAKNSLISLPVSIG 315

Query: 196 EQGLSAV 202
           +  L  V
Sbjct: 316 DLALLQV 322



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/166 (38%), Positives = 93/166 (56%), Gaps = 3/166 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           VL +H N+L+ LP SIG LS L  L +  N L SLP  +    SL EL  + N+L  LP 
Sbjct: 322 VLHLHENELEALPESIGDLSALTDLRLDHNNLTSLPPEVGVMSSLTELLLDGNQLNTLPL 381

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
           +IG  L  L+ L+++ N++ +LP  +  +T+LR L    N L  +PE + +L NL VL +
Sbjct: 382 SIG-RLTELQVLNLDGNRLSLLPPEVAGMTALRELWVHDNKLSVVPEGIADLTNLNVLTL 440

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           S N   L  LP ++  L+SL EL +  N + + P   G L  L+ L
Sbjct: 441 SNN--ELTVLPANMTRLVSLNELWIKDNNLKSHPFRQGLLPNLRVL 484



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 99/185 (53%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+  L +  N +  LP  IG LS L+ L+++ N L SLP +I +   L+ L+ + N+L
Sbjct: 271 LTNLTFLSLSGNPITSLPLEIGGLSALRALNLAKNSLISLPVSIGDLALLQVLHLHENEL 330

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP++IG +L  L  L ++ N +  LP  +  ++SL  L    N L +LP  +  L  L
Sbjct: 331 EALPESIG-DLSALTDLRLDHNNLTSLPPEVGVMSSLTELLLDGNQLNTLPLSIGRLTEL 389

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           +VLN+  N   L  LP  +  + +L EL V  NK++ +P+ I  L  L  L+L  N L  
Sbjct: 390 QVLNLDGN--RLSLLPPEVAGMTALRELWVHDNKLSVVPEGIADLTNLNVLTLSNNELTV 447

Query: 190 PPMDV 194
            P ++
Sbjct: 448 LPANM 452



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 104/199 (52%), Gaps = 32/199 (16%)

Query: 5   SLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNA 64
           SLT+  LN ++L    N L  +P  IG L+ L  L +SGN + SLP  I    +L  LN 
Sbjct: 247 SLTS--LNTLILT--DNNLPEIPAEIGYLTNLTFLSLSGNPITSLPLEIGGLSALRALNL 302

Query: 65  NFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLE 124
             N L  LP +IG +L  L+ L ++ N++  LP+S+  L++L   D RL           
Sbjct: 303 AKNSLISLPVSIG-DLALLQVLHLHENELEALPESIGDLSALT--DLRL----------- 348

Query: 125 NLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEG 184
                       +   L +LP  +G++ SL EL +  N++ TLP SIG L +LQ L+L+G
Sbjct: 349 ------------DHNNLTSLPPEVGVMSSLTELLLDGNQLNTLPLSIGRLTELQVLNLDG 396

Query: 185 NPLVSPPMDVVEQGLSAVK 203
           N L   P +V   G++A++
Sbjct: 397 NRLSLLPPEVA--GMTALR 413


>gi|421088182|ref|ZP_15549010.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410003167|gb|EKO53613.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 240

 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/195 (40%), Positives = 111/195 (56%), Gaps = 3/195 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++   +LK LP  IG L  L+ LD+  NLL +LPK IE  ++L+ LN   ++L 
Sbjct: 44  LDVRVLNLSEQKLKTLPKEIGQLQNLQTLDLRNNLLTTLPKEIERLQNLQTLNLINSQLM 103

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG     L+ L ++ N++  LP+ +  L  LR L    N LK+LP ++  L NL+
Sbjct: 104 TLPKEIGQLQN-LQQLELDYNRLYTLPKEIGRLKKLRTLSLWGNRLKTLPNEIGQLKNLQ 162

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++S N   L+TLP  I  L +L ELD+  N +TTLP  IG L+ LQKL L  N L S 
Sbjct: 163 RLHLSYN--QLKTLPNEIEQLQNLQELDLRNNLLTTLPKGIGQLKNLQKLDLRNNELFSE 220

Query: 191 PMDVVEQGLSAVKGY 205
               + + L   + Y
Sbjct: 221 EKGRIRKLLPKCQIY 235



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 77/129 (59%), Gaps = 1/129 (0%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RL N+  L++ ++QL  LP  IG L  L+ L++  N L +LPK I   + L  L+   N+
Sbjct: 88  RLQNLQTLNLINSQLMTLPKEIGQLQNLQQLELDYNRLYTLPKEIGRLKKLRTLSLWGNR 147

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L+ LP+ IG +L NL+ L ++ N++  LP  +  L +L+ LD R N L +LP+ +  L N
Sbjct: 148 LKTLPNEIG-QLKNLQRLHLSYNQLKTLPNEIEQLQNLQELDLRNNLLTTLPKGIGQLKN 206

Query: 129 LEVLNISQN 137
           L+ L++  N
Sbjct: 207 LQKLDLRNN 215


>gi|383872300|ref|NP_001244517.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
 gi|355783099|gb|EHH65020.1| hypothetical protein EGM_18359 [Macaca fascicularis]
 gi|380784083|gb|AFE63917.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
 gi|383421817|gb|AFH34122.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
 gi|384943642|gb|AFI35426.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
          Length = 582

 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 110/191 (57%), Gaps = 4/191 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+   L  +  L ++SN+L+ LP  +GCL  L  L +S N L SLP +++N + L 
Sbjct: 114 ILPSSI-KELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLR 172

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKLR++P  + + L +L TL +  N+I  + + + +L+ L +L  R N +K LP
Sbjct: 173 MLDLRHNKLREIPSVV-YRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLP 231

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG    +  LD+ +N++  LPD+IG L  L +L
Sbjct: 232 AEIGELCNLITLDVAHN--QLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRL 289

Query: 181 SLEGNPLVSPP 191
            L  N L + P
Sbjct: 290 GLRYNRLSAIP 300



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 103/185 (55%), Gaps = 12/185 (6%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  +  L+   N+L  LPD
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEVLN 133
           TIG  L +L  L +  N++  +P+SL+  ++L  L+   N + +LPE  L +L+ L  L 
Sbjct: 279 TIG-NLSSLSRLGLRYNRLSAIPRSLSKCSALEELNLENNNISTLPESLLSSLVKLNSLT 337

Query: 134 ISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNPLV 188
           +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N L 
Sbjct: 338 LARNCFQL-----YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLT 392

Query: 189 SPPMD 193
           S P+D
Sbjct: 393 SLPLD 397



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 2/160 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           ++V L++ +NQL  +P  +  L  L+VL +S NLL+ LP  + N R L EL+   NKL  
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ I + L +L+ L +  N++  LP+ + HLT+L  L    N L  LPE++  L NLE 
Sbjct: 463 LPNEIAY-LKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEE 521

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           L ++ N   L +LP+ + L   L  + +    ++ LP  I
Sbjct: 522 LYLNDN-PNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 560



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 8/177 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 357 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  L +L  LR LD   N L+SLP ++  L +L
Sbjct: 415 TKIPEDVSG-LVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           + L ++ N   L TLP  IG L +L  L +  N +T LP+ IG L  L++L L  NP
Sbjct: 474 QKLVLTNN--QLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNP 528



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N+L  LP++IG LS L  L +  N L ++P+++  C +LEELN   N +  L
Sbjct: 263 ITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLSKCSALEELNLENNNISTL 322

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+++   L+ L +L++  NC                                        
Sbjct: 323 PESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLS 382

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N L  +PED+  L++LEVL +S N   L+ L
Sbjct: 383 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKL 440

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ +G L  L ELD+  NK+ +LP+ I  L+ LQKL L  N L + P  +
Sbjct: 441 PHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 97/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +PESL + L+ +  L +  N  +  P       S +  L++  N +  +P  I    + L
Sbjct: 322 LPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL 381

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP   G    ++  L++  N++  +P+ ++ L SL VL    N LK L
Sbjct: 382 SKLNMKDNQLTSLPLDFG-TWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  L NL  L  L++ +N   LE+LP  I  L  L +L ++ N++TTLP  IG L  L  
Sbjct: 441 PHGLGNLRKLRELDLEEN--KLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTH 498

Query: 180 LSLEGNPLVSPPMDV 194
           L L  N L   P ++
Sbjct: 499 LGLGENLLTHLPEEI 513



 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L ++   I ILP S+  LT L  L    N L+SLP ++  L+NL  L +S+N   L +LP
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLP 162

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            S+  L  L  LD+ +NK+  +P  +  L  L  L L  N + +   D+
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 211


>gi|403259517|ref|XP_003922256.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Saimiri boliviensis
           boliviensis]
          Length = 582

 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 112/196 (57%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+   L  +  L ++SN+L+ LP  +GCL  L  L +S N L SLP +++N + L 
Sbjct: 114 ILPSSI-KELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLR 172

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKLR++P  + + L +L TL +  N+I  + + + +L+ L +L  R N +K LP
Sbjct: 173 MLDLRHNKLREIPSVV-YRLDSLTTLYLRFNRITTVEKDIKNLSRLSMLSIRENKIKQLP 231

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG    +  LD+ +N++  LPD+IG L  L +L
Sbjct: 232 AEIGELCNLITLDVAHN--QLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLNRL 289

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N L + P  + +
Sbjct: 290 GLRYNRLSAIPRSLAK 305



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 102/185 (55%), Gaps = 12/185 (6%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  +  L+   N+L  LPD
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEVLN 133
           TIG  L +L  L +  N++  +P+SL   ++L  L+   N + +LPE  L +L+ L  L 
Sbjct: 279 TIG-NLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLT 337

Query: 134 ISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNPLV 188
           +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N L 
Sbjct: 338 LARNCFQL-----YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLT 392

Query: 189 SPPMD 193
           S P+D
Sbjct: 393 SLPLD 397



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 2/160 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           ++V L++ +NQL  +P  +  L  L+VL +S NLL+ LP  + N R L EL+   NKL  
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ I + L +L+ L +  N++  LP+ + HLT+L  L    N L  LPE++  L NLE 
Sbjct: 463 LPNEIAY-LKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEE 521

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           L ++ N   L +LP+ + L   L  + +    ++ LP  I
Sbjct: 522 LYLNDN-PNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 560



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 8/177 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 357 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  L +L  LR LD   N L+SLP ++  L +L
Sbjct: 415 TKIPEDVSG-LVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           + L ++ N   L TLP  IG L +L  L +  N +T LP+ IG L  L++L L  NP
Sbjct: 474 QKLVLTNN--QLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNP 528



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N+L  LP++IG LS L  L +  N L ++P+++  C +LEELN   N +  L
Sbjct: 263 ITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTL 322

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+++   L+ L +L++  NC                                        
Sbjct: 323 PESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLS 382

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N L  +PED+  L++LEVL +S N   L+ L
Sbjct: 383 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKL 440

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ +G L  L ELD+  NK+ +LP+ I  L+ LQKL L  N L + P  +
Sbjct: 441 PHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 97/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +PESL + L+ +  L +  N  +  P       S +  L++  N +  +P  I    + L
Sbjct: 322 LPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL 381

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP   G    ++  L++  N++  +P+ ++ L SL VL    N LK L
Sbjct: 382 SKLNMKDNQLTSLPLDFG-TWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  L NL  L  L++ +N   LE+LP  I  L  L +L ++ N++TTLP  IG L  L  
Sbjct: 441 PHGLGNLRKLRELDLEEN--KLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTH 498

Query: 180 LSLEGNPLVSPPMDV 194
           L L  N L   P ++
Sbjct: 499 LGLGENLLTHLPEEI 513



 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L ++   I ILP S+  LT L  L    N L+SLP ++  L+NL  L +S+N   L +LP
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLP 162

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            S+  L  L  LD+ +NK+  +P  +  L  L  L L  N + +   D+
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 211


>gi|291242572|ref|XP_002741180.1| PREDICTED: Lap1-like, partial [Saccoglossus kowalevskii]
          Length = 308

 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/190 (35%), Positives = 111/190 (58%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+SL A L  +  L + S+ L  +P++IG L  +K+L +  N +E +P ++     L E
Sbjct: 121 IPDSLCA-LEQLTELYMGSDALTAIPDAIGKLKSMKILKLDENEIEKIPDSLCALEQLTE 179

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN  +N L  +PD IG +L ++K L++  NK   +P SL  L  L  L+ + N L S+P+
Sbjct: 180 LNMKYNALTAIPDEIG-KLKSMKILNLRSNKFAKIPDSLCALEQLTELNMKSNALTSIPD 238

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +++ LN+S N   +E +P S+  L  L EL++ YN +T +PD IG L+ ++ L+
Sbjct: 239 EISKLKSMKTLNLSAN--TIEKIPDSLCALEQLTELNMKYNALTAIPDEIGKLKSMKILN 296

Query: 182 LEGNPLVSPP 191
           L+ N     P
Sbjct: 297 LKSNKFAKIP 306



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 105/190 (55%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPESL A L  +  L+V  N L  +P+ I  L  +K+L++S N +  +P ++     L E
Sbjct: 29  IPESLYA-LEQLTELNVRYNALTAIPDEISKLKNMKILNLSSNKIAKIPDSLCALEQLTE 87

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L   +N L  +PD IG +L +L  L +N NKI  +P SL  L  L  L    + L ++P+
Sbjct: 88  LYMEYNALTAIPDEIG-KLKSLNILKLNNNKIAKIPDSLCALEQLTELYMGSDALTAIPD 146

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L ++++L + +N   +E +P S+  L  L EL++ YN +T +PD IG L+ ++ L+
Sbjct: 147 AIGKLKSMKILKLDEN--EIEKIPDSLCALEQLTELNMKYNALTAIPDEIGKLKSMKILN 204

Query: 182 LEGNPLVSPP 191
           L  N     P
Sbjct: 205 LRSNKFAKIP 214



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 96/171 (56%), Gaps = 3/171 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N L  +P  IG   +L+ L++S N +E +P+++     L ELN  +N L  +PD I  +L
Sbjct: 1   NGLTIVPQEIGECHELQKLNLSSNKIEKIPESLYALEQLTELNVRYNALTAIPDEIS-KL 59

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+K L+++ NKI  +P SL  L  L  L    N L ++P+++  L +L +L ++ N   
Sbjct: 60  KNMKILNLSSNKIAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSLNILKLNNN--K 117

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           +  +P S+  L  L EL +  + +T +PD+IG L+ ++ L L+ N +   P
Sbjct: 118 IAKIPDSLCALEQLTELYMGSDALTAIPDAIGKLKSMKILKLDENEIEKIP 168



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 108/193 (55%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ ++ +L N+ +L++ SN++  +P+S+  L +L  L +  N L ++P  I   +SL  
Sbjct: 52  IPDEIS-KLKNMKILNLSSNKIAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSLNI 110

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  N NK+ ++PD++   L  L  L +  + +  +P ++  L S+++L    N ++ +P+
Sbjct: 111 LKLNNNKIAKIPDSL-CALEQLTELYMGSDALTAIPDAIGKLKSMKILKLDENEIEKIPD 169

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L  L  L  LN+   +  L  +P  IG L S+  L++  NK   +PDS+  L +L +L+
Sbjct: 170 SLCALEQLTELNMK--YNALTAIPDEIGKLKSMKILNLRSNKFAKIPDSLCALEQLTELN 227

Query: 182 LEGNPLVSPPMDV 194
           ++ N L S P ++
Sbjct: 228 MKSNALTSIPDEI 240



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 57/98 (58%), Gaps = 2/98 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+SL A L  +  L++ SN L  +P+ I  L  +K L++S N +E +P ++     L E
Sbjct: 213 IPDSLCA-LEQLTELNMKSNALTSIPDEISKLKSMKTLNLSANTIEKIPDSLCALEQLTE 271

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQS 99
           LN  +N L  +PD IG +L ++K L++  NK   +P S
Sbjct: 272 LNMKYNALTAIPDEIG-KLKSMKILNLKSNKFAKIPDS 308



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 69/120 (57%), Gaps = 2/120 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L ++ +L++ SN+   +P+S+  L +L  L++  N L S+P  I   +S++ 
Sbjct: 190 IPDEI-GKLKSMKILNLRSNKFAKIPDSLCALEQLTELNMKSNALTSIPDEISKLKSMKT 248

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N + ++PD++   L  L  L++  N +  +P  +  L S+++L+ + N    +P+
Sbjct: 249 LNLSANTIEKIPDSL-CALEQLTELNMKYNALTAIPDEIGKLKSMKILNLKSNKFAKIPD 307



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 26/128 (20%)

Query: 67  NKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENL 126
           N L  +P  IG E   L+ L+++ NKI  +P+SL  L  L  L+ R N L ++P+++  L
Sbjct: 1   NGLTIVPQEIG-ECHELQKLNLSSNKIEKIPESLYALEQLTELNVRYNALTAIPDEISKL 59

Query: 127 INLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
            N+++LN+S N                         KI  +PDS+  L +L +L +E N 
Sbjct: 60  KNMKILNLSSN-------------------------KIAKIPDSLCALEQLTELYMEYNA 94

Query: 187 LVSPPMDV 194
           L + P ++
Sbjct: 95  LTAIPDEI 102


>gi|417781290|ref|ZP_12429042.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410778541|gb|EKR63167.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 591

 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/188 (37%), Positives = 112/188 (59%), Gaps = 3/188 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L++ SN+L  LP  +  L KL+ LD+  N L +LPK I   +SL+ L    N+
Sbjct: 207 QLQNLQALNLDSNELTALPKEMRQLQKLQKLDLRENQLTTLPKEIGQLKSLQTLYLLANQ 266

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP+ IG +L NL+ L +  N+   LP+ +  L +L+ L    N L + P+++E L N
Sbjct: 267 LTILPEEIG-KLRNLQKLYLCENRFTTLPKDIGQLQNLQSLYLYGNQLTAFPKEIEQLQN 325

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L++LN+S N   L TLP  IG L +L  L++SYN++T LP  +G LR L+ L L    + 
Sbjct: 326 LQILNLSYN--RLTTLPEEIGQLQNLQILNLSYNQLTKLPKELGKLRNLKTLDLHAIQIT 383

Query: 189 SPPMDVVE 196
           + P ++++
Sbjct: 384 TFPKEILQ 391



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 112/185 (60%), Gaps = 4/185 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++PE +  +L N+  L +  N+   LP  IG L  L+ L + GN L + PK IE  ++L+
Sbjct: 269 ILPEEI-GKLRNLQKLYLCENRFTTLPKDIGQLQNLQSLYLYGNQLTAFPKEIEQLQNLQ 327

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            LN ++N+L  LP+ IG +L NL+ L+++ N++  LP+ L  L +L+ LD     + + P
Sbjct: 328 ILNLSYNRLTTLPEEIG-QLQNLQILNLSYNQLTKLPKELGKLRNLKTLDLHAIQITTFP 386

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++  L NLE LN S+    L TLP  IG + +L EL++  N++T LP  IG L+ L++L
Sbjct: 387 KEILQLQNLEKLNWSRT--QLTTLPGEIGQMQNLKELNLEKNQLTALPKEIGRLQNLEEL 444

Query: 181 SLEGN 185
           +L  N
Sbjct: 445 NLNSN 449



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/197 (37%), Positives = 113/197 (57%), Gaps = 6/197 (3%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ L  +L N+  LD+H+ Q+   P  I  L  L+ L+ S   L +LP  I   ++L+E
Sbjct: 362 LPKEL-GKLRNLKTLDLHAIQITTFPKEILQLQNLEKLNWSRTQLTTLPGEIGQMQNLKE 420

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCN--KIVILPQSLTHLTSLRVLDARLNCLKSL 119
           LN   N+L  LP  IG  L NL+ L++N N  +   LP+ +  L++L+ L    N L +L
Sbjct: 421 LNLEKNQLTALPKEIG-RLQNLEELNLNSNSNQFSSLPKEIGQLSNLKNLHLDHNMLANL 479

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+++  L  LE L + +N   LETLP  IG L +L ELD+SYN ++++P  IG L+ L+ 
Sbjct: 480 PKEIGQLSRLETLTLFRN--SLETLPEEIGQLWNLRELDLSYNPLSSIPKEIGQLKNLRI 537

Query: 180 LSLEGNPLVSPPMDVVE 196
           L L   PL   P ++ E
Sbjct: 538 LHLRKTPLARLPDEIGE 554



 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 103/186 (55%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ +L +  NQL  L   IG L KL+ LD+  N   +LPK I   ++L+ LN + N+
Sbjct: 92  QLQNLQMLGLCCNQLTILSEEIGQLQKLRALDLRANQFATLPKEILQLQNLQTLNLDSNE 151

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  +  +L  L+ L +  N++  LP+ +  L SL+ L  R N   +LP+++  L N
Sbjct: 152 LTALPKEMR-QLQKLQKLDLRENQLTTLPKEIGQLKSLQTLYLRANQFATLPKEILQLQN 210

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ LN+  N   L  LP  +  L  L +LD+  N++TTLP  IG L+ LQ L L  N L 
Sbjct: 211 LQALNLDSN--ELTALPKEMRQLQKLQKLDLRENQLTTLPKEIGQLKSLQTLYLLANQLT 268

Query: 189 SPPMDV 194
             P ++
Sbjct: 269 ILPEEI 274



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/169 (37%), Positives = 98/169 (57%), Gaps = 4/169 (2%)

Query: 35  KLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
           K++VL++S   L +LPK I   ++L+ L+   NKL  LP  I  +L NL+ L + CN++ 
Sbjct: 49  KVRVLNLSFQKLSTLPKEIGELQNLQTLDLFDNKLTVLPKEI-LQLQNLQMLGLCCNQLT 107

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSL 154
           IL + +  L  LR LD R N   +LP+++  L NL+ LN+  N   L  LP  +  L  L
Sbjct: 108 ILSEEIGQLQKLRALDLRANQFATLPKEILQLQNLQTLNLDSN--ELTALPKEMRQLQKL 165

Query: 155 VELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGLSAV 202
            +LD+  N++TTLP  IG L+ LQ L L  N   + P ++++ Q L A+
Sbjct: 166 QKLDLRENQLTTLPKEIGQLKSLQTLYLRANQFATLPKEILQLQNLQAL 214



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 112/210 (53%), Gaps = 24/210 (11%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L ++ NQL   P  I  L  L++L++S N L +LP+ I   ++L+ LN ++N
Sbjct: 298 GQLQNLQSLYLYGNQLTAFPKEIEQLQNLQILNLSYNRLTTLPEEIGQLQNLQILNLSYN 357

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSL-------------THLTSL-------- 106
           +L +LP  +G +L NLKTL ++  +I   P+ +             T LT+L        
Sbjct: 358 QLTKLPKELG-KLRNLKTLDLHAIQITTFPKEILQLQNLEKLNWSRTQLTTLPGEIGQMQ 416

Query: 107 --RVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
             + L+   N L +LP+++  L NLE LN++ N     +LP  IG L +L  L + +N +
Sbjct: 417 NLKELNLEKNQLTALPKEIGRLQNLEELNLNSNSNQFSSLPKEIGQLSNLKNLHLDHNML 476

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP  IG L +L+ L+L  N L + P ++
Sbjct: 477 ANLPKEIGQLSRLETLTLFRNSLETLPEEI 506



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/117 (39%), Positives = 66/117 (56%), Gaps = 1/117 (0%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L+ +SNQ   LP  IG LS LK L +  N+L +LPK I     LE L    N L  LP+ 
Sbjct: 446 LNSNSNQFSSLPKEIGQLSNLKNLHLDHNMLANLPKEIGQLSRLETLTLFRNSLETLPEE 505

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           IG +L NL+ L ++ N +  +P+ +  L +LR+L  R   L  LP+++  L +LE L
Sbjct: 506 IG-QLWNLRELDLSYNPLSSIPKEIGQLKNLRILHLRKTPLARLPDEIGELQDLEEL 561


>gi|194380802|dbj|BAG58554.1| unnamed protein product [Homo sapiens]
          Length = 610

 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 132/241 (54%), Gaps = 13/241 (5%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFN-GALRN-HRSEERERFIMSDFRAID 256
           L+A+  +LS     D++S   +S+        +F+ G+ R+ H S+      ++D R   
Sbjct: 393 LTAM--WLS-----DNQSMLSRSFNSNFTTVSSFHCGSSRDLHGSQGSLALSVADRRGSG 445

Query: 257 G 257
           G
Sbjct: 446 G 446



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 106/189 (56%), Gaps = 10/189 (5%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L  + A+ N + +LPD 
Sbjct: 74  LSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPD- 132

Query: 76  IGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            GF +L+NL  L +N   +  LP +   LT L++L+ R N LK LP+ +  L  LE L++
Sbjct: 133 -GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDL 191

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N ++ E +P  +  L  L E  +  N++T +P  IG L++L  L +  N +     ++
Sbjct: 192 GSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EM 244

Query: 195 VEQGLSAVK 203
           VE+G+S  +
Sbjct: 245 VEEGISTCE 253



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  L+  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+EEL+ +FN++  
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEA 313

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +IG +L NL+T + + N +  LP  +    ++ VL    N L++LPE++ ++  L+V
Sbjct: 314 LPSSIG-QLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKV 372

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           +N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 373 INLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 2/136 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE++   L N+  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    +L  
Sbjct: 268 LPETI-GSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRT 326

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
             A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP 
Sbjct: 327 FAADHNYLQQLPPEIG-SWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPF 385

Query: 122 DLENLINLEVLNISQN 137
               L  L  + +S N
Sbjct: 386 SFTKLQQLTAMWLSDN 401


>gi|456825507|gb|EMF73903.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 588

 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+ +N+L  LP  IG L  L+ L++S N L + PK I   + L++L  ++N
Sbjct: 346 GQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYN 405

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+TLS++ N++  LP+ +  L +L  L+   N L +LP+++  L 
Sbjct: 406 RLVILPKEIG-QLKNLQTLSLSYNRLTTLPKEIGQLKNLENLELSENRLATLPKEIGQLQ 464

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++  N     T P  IG L +L  LD+  N++T LP  I  L+ L  L L  N L
Sbjct: 465 NLQKLDLDTN--RFATFPKEIGQLQNLYNLDLGNNQLTALPKEIAQLKNLYDLDLNTNQL 522

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 523 TTLPKEI 529



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 111/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  NQL  LP  IG L  L+ L +S N L + PK I    +L+ELN  +N
Sbjct: 116 GQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWN 175

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L ++ N++   P+ +  L  L+ L    N L + P+++  L 
Sbjct: 176 RLTALPKEIG-QLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLK 234

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L++   +   +T+   IG L +L++L++SYN++ TLP  IG L+KLQ LSL  N L
Sbjct: 235 NLQMLDLC--YNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQL 292

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 293 TTLPKEI 299



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 99/174 (56%), Gaps = 3/174 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           NQL  LP  IG L KL+ L +  N L +LPK I   ++L  L+   N+L  LP  IG +L
Sbjct: 267 NQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIG-QL 325

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            NL  L +  N++   P+ +  L +L+ LD   N L +LP+++  L NLE L +S+N   
Sbjct: 326 KNLYNLGLGRNQLTTFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSEN--Q 383

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L T P  IG L  L +L +SYN++  LP  IG L+ LQ LSL  N L + P ++
Sbjct: 384 LTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLKNLQTLSLSYNRLTTLPKEI 437



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 104/184 (56%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           LNV VL++       LP  I  L  L+ L++  N L +LP  I   ++LE+LN   N+L 
Sbjct: 50  LNVRVLNLSGQNFTTLPKEIEKLKNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLT 109

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG +L NL+TL++  N++  LP  +  L +L+ L    N L + P+++  L NL+
Sbjct: 110 VLPKEIG-QLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQ 168

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+  N   L  LP  IG L +L  L++S N++TT P  IG L+KLQ L L  N L + 
Sbjct: 169 ELNLKWN--RLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTF 226

Query: 191 PMDV 194
           P ++
Sbjct: 227 PKEI 230



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/174 (39%), Positives = 102/174 (58%), Gaps = 3/174 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L++  NQL  LP  IG L  L+ L++  N L  LPK I   ++L+ LN   N+
Sbjct: 71  KLKNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQ 130

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG +L NL+TL ++ N++   P+ +  L +L+ L+ + N L +LP+++  L N
Sbjct: 131 LATLPVEIG-QLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQLKN 189

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           LE L +S+N   L T P  IG L  L +L +  N++TT P  IG L+ LQ L L
Sbjct: 190 LENLELSEN--QLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDL 241



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 104/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +LD+  NQ K +   IG L  L  L++S N L +LP  I   + L++L+   N
Sbjct: 231 GQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRN 290

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL  L +  N++  LP+ +  L +L  L    N L + P+++  L 
Sbjct: 291 QLTTLPKEIG-QLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLTTFPKEIGQLE 349

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++  N   L  LP  IG L +L  L++S N++TT P  IG L+KLQ L L  N L
Sbjct: 350 NLQELDLWNN--RLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRL 407

Query: 188 VSPPMDV 194
           V  P ++
Sbjct: 408 VILPKEI 414



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/157 (38%), Positives = 89/157 (56%), Gaps = 3/157 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  N+L  LP  IG L  L+ L +S N L +LPK I   ++LE L  + N+L  LP  
Sbjct: 400 LGLSYNRLVILPKEIGQLKNLQTLSLSYNRLTTLPKEIGQLKNLENLELSENRLATLPKE 459

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL+ L ++ N+    P+ +  L +L  LD   N L +LP+++  L NL  L+++
Sbjct: 460 IG-QLQNLQKLDLDTNRFATFPKEIGQLQNLYNLDLGNNQLTALPKEIAQLKNLYDLDLN 518

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
            N   L TLP  IG L +L  L +  N++TTLP  IG
Sbjct: 519 TN--QLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEIG 553



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 62/99 (62%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +  ++RVL+       +LP+++E L NL+ LN+  N   L TLP  IG L +L 
Sbjct: 42  LTKALQNPLNVRVLNLSGQNFTTLPKEIEKLKNLQTLNLQDN--QLATLPVEIGQLQNLE 99

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +L++  N++T LP  IG L+ LQ L+L+ N L + P+++
Sbjct: 100 KLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEI 138



 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 1/93 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+ +N+    P  IG L  L  LD+  N L +LPK I   ++L +L+ N N
Sbjct: 461 GQLQNLQKLDLDTNRFATFPKEIGQLQNLYNLDLGNNQLTALPKEIAQLKNLYDLDLNTN 520

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSL 100
           +L  LP  IG +L NL  L +  N++  LP+ +
Sbjct: 521 QLTTLPKEIG-QLKNLYNLGLGTNQLTTLPKEI 552


>gi|157124572|ref|XP_001654111.1| shoc2 [Aedes aegypti]
 gi|108873917|gb|EAT38142.1| AAEL009928-PA [Aedes aegypti]
          Length = 472

 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 65/177 (36%), Positives = 108/177 (61%), Gaps = 3/177 (1%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           ++ N++  LP  IGCLS LK L ++ N L SLP +++N + L+ L+   NKL ++PD I 
Sbjct: 68  LYGNKISSLPVEIGCLSNLKTLALNENSLTSLPDSLQNLKQLKVLDLRHNKLSEIPDVI- 126

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
           ++L  L TL +  N+I ++  +L +L+ L +L  R N +  LP  + +L+NL  L++S N
Sbjct: 127 YKLHTLTTLYLRFNRIKVVGDNLKNLSHLTMLSLRENKIHELPSAIGHLVNLTTLDLSHN 186

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +L+ LP  IG  ++L  LD+ +N +  +P++IG L  L +L L  N L S P+ +
Sbjct: 187 --HLKHLPAEIGNCVNLTALDLQHNDLLDIPETIGNLANLMRLGLRYNQLTSIPVSL 241



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 102/185 (55%), Gaps = 3/185 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           +N+  LD+  N L  +P +IG L+ L  L +  N L S+P +++NC  ++E N   N + 
Sbjct: 199 VNLTALDLQHNDLLDIPETIGNLANLMRLGLRYNQLTSIPVSLKNCTHMDEFNVEGNGIS 258

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQ-SLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           QLPD +   L NL T++++ N     P       T++  L+   N L  LP+D+  L NL
Sbjct: 259 QLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNMVELNFGTNSLTKLPDDIHCLQNL 318

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           E+L +S N   L+ +P +IG L  L  LD+  N++ +LP  IG L  LQKL L+ N L S
Sbjct: 319 EILILSNNV--LKRIPNTIGNLKKLRVLDLEENRLESLPSEIGLLHDLQKLILQSNQLTS 376

Query: 190 PPMDV 194
            P  +
Sbjct: 377 LPRTI 381



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 102/182 (56%), Gaps = 3/182 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+  L ++ N L  LP+S+  L +LKVLD+  N L  +P  I    +L  L   FN++
Sbjct: 83  LSNLKTLALNENSLTSLPDSLQNLKQLKVLDLRHNKLSEIPDVIYKLHTLTTLYLRFNRI 142

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           + + D +   L +L  LS+  NKI  LP ++ HL +L  LD   N LK LP ++ N +NL
Sbjct: 143 KVVGDNLK-NLSHLTMLSLRENKIHELPSAIGHLVNLTTLDLSHNHLKHLPAEIGNCVNL 201

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
             L++  N   L  +P +IG L +L+ L + YN++T++P S+     + + ++EGN +  
Sbjct: 202 TALDLQHN--DLLDIPETIGNLANLMRLGLRYNQLTSIPVSLKNCTHMDEFNVEGNGISQ 259

Query: 190 PP 191
            P
Sbjct: 260 LP 261



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 105/204 (51%), Gaps = 25/204 (12%)

Query: 3   PESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEEL 62
           P    A+  N+V L+  +N L  LP+ I CL  L++L +S N+L+ +P TI N + L  L
Sbjct: 285 PSGGPAQFTNMVELNFGTNSLTKLPDDIHCLQNLEILILSNNVLKRIPNTIGNLKKLRVL 344

Query: 63  NANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED 122
           +   N+L  LP  IG  L +L+ L +  N++  LP+++ HLT+L  L    N L+ LPE+
Sbjct: 345 DLEENRLESLPSEIGL-LHDLQKLILQSNQLTSLPRTIGHLTNLTYLSVGENNLQFLPEE 403

Query: 123 LENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           +  L NLE L I+ N   ++ LPY + L                      C + L  +S+
Sbjct: 404 IGTLENLESLYINDNASLVK-LPYELAL----------------------C-QNLAIMSI 439

Query: 183 EGNPLVSPPMDVVEQGLSAVKGYL 206
           E  PL + P +VV  G S V  YL
Sbjct: 440 ENCPLSALPPEVVGGGPSLVIQYL 463



 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 12/153 (7%)

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           ++ L ++ + I I+P S+   TSL       N + SLP ++  L NL+ L +++N   L 
Sbjct: 40  IQRLDLSKSSITIIPPSVKDCTSLVEFYLYGNKISSLPVEIGCLSNLKTLALNEN--SLT 97

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAV 202
           +LP S+  L  L  LD+ +NK++ +PD I  L  L  L L  N      + VV   L  +
Sbjct: 98  SLPDSLQNLKQLKVLDLRHNKLSEIPDVIYKLHTLTTLYLRFN-----RIKVVGDNLKNL 152

Query: 203 K--GYLSEKMNNDHKSPKKKSWVGKLVKYGTFN 233
                LS + N  H+ P   S +G LV   T +
Sbjct: 153 SHLTMLSLRENKIHELP---SAIGHLVNLTTLD 182


>gi|418701702|ref|ZP_13262624.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759266|gb|EKR25481.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 287

 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 127/220 (57%), Gaps = 10/220 (4%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  LD+ +NQ K LP  IG L  L+ L++  N L++LPK I   +SL++LN + N+
Sbjct: 69  QLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQSLQKLNLDKNR 128

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L+ LP+ IG +L NL+ L ++ N++ ILP+ +  L +L+ L    N L  LP+++  L N
Sbjct: 129 LKALPNEIG-QLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQN 187

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L++L    N   L  LP  IG L  L  L +S+N++TTLP  IG L+ LQ      N L 
Sbjct: 188 LKLLYSVNN--ELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLKNLQTFISFNNQLT 245

Query: 189 SPPMDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
             P ++ + Q L  +      K+NN+  S +++  + KL+
Sbjct: 246 MLPNEIGQLQNLQWL------KLNNNQLSFQEEERIRKLL 279



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 71/184 (38%), Positives = 106/184 (57%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++ S +L  LP  I  L  LK LD++ N  ++LPK I   ++L+ELN   N+L+
Sbjct: 48  LDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLK 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG +L +L+ L+++ N++  LP  +  L +L+ L    N L  LPE++  L NL+
Sbjct: 108 NLPKEIG-QLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +  N   L  LP  IG L +L  L    N++T LP  IG L+KLQ L L  N L + 
Sbjct: 167 ALILGDN--QLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTL 224

Query: 191 PMDV 194
           P ++
Sbjct: 225 PKEI 228



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVL+     L +LP++++ L NL+ L+++ N    +TLP  IG L +L 
Sbjct: 40  LTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANN--QFKTLPKEIGQLQNLQ 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           EL++  N++  LP  IG L+ LQKL+L+ N L + P ++
Sbjct: 98  ELNLWNNQLKNLPKEIGQLQSLQKLNLDKNRLKALPNEI 136


>gi|126650300|ref|ZP_01722528.1| Leucine-rich repeat (LRR) protein [Bacillus sp. B14905]
 gi|126592950|gb|EAZ86932.1| Leucine-rich repeat (LRR) protein [Bacillus sp. B14905]
          Length = 289

 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/167 (40%), Positives = 100/167 (59%), Gaps = 3/167 (1%)

Query: 19  HSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGF 78
           H NQL+ +P  IG L+K++ L++S NLL  LP+ I N   L EL    N+L +LP+++  
Sbjct: 105 HHNQLQSIPPEIGQLTKVRYLNLSDNLLSGLPEEIGNLNKLVELRIMNNRLTELPESL-C 163

Query: 79  ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNF 138
            L NL+ L +  N +  LP+ +  L  LRVL+   N L+ +P+ L   I L  LN+ QN 
Sbjct: 164 RLTNLRELHLKKNSMTSLPEKIGELALLRVLELEDNQLQEVPDSLHTCIKLRRLNLRQN- 222

Query: 139 QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
             L+TLP SIG L +L+ELD+  N +  LP+S+  +  L++L L  N
Sbjct: 223 -KLKTLPASIGQLKNLIELDLRSNDLKELPESLLAMESLERLDLRWN 268



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 96/183 (52%), Gaps = 5/183 (2%)

Query: 22  QLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           +LK LP+  G   K +K L++  N L  +P  I    S+E LN + NK+  LP  I   L
Sbjct: 14  KLKTLPDFNGSQIKGIKDLNLYDNDLREIPTEIFQMTSIEILNISVNKINNLPAEIT-NL 72

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLR-VLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
            NL+ L    N I ++P  + HL ++   L    N L+S+P ++  L  +  LN+S N  
Sbjct: 73  KNLRMLDAGHNHIDLIPPEIGHLVNMEDYLYFHHNQLQSIPPEIGQLTKVRYLNLSDNL- 131

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGL 199
            L  LP  IG L  LVEL +  N++T LP+S+  L  L++L L+ N + S P  + E  L
Sbjct: 132 -LSGLPEEIGNLNKLVELRIMNNRLTELPESLCRLTNLRELHLKKNSMTSLPEKIGELAL 190

Query: 200 SAV 202
             V
Sbjct: 191 LRV 193



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 70/125 (56%), Gaps = 2/125 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PESL  RL N+  L +  N +  LP  IG L+ L+VL++  N L+ +P ++  C  L  
Sbjct: 158 LPESL-CRLTNLRELHLKKNSMTSLPEKIGELALLRVLELEDNQLQEVPDSLHTCIKLRR 216

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   NKL+ LP +IG +L NL  L +  N +  LP+SL  + SL  LD R N    +P 
Sbjct: 217 LNLRQNKLKTLPASIG-QLKNLIELDLRSNDLKELPESLLAMESLERLDLRWNHELKIPS 275

Query: 122 DLENL 126
            L+ L
Sbjct: 276 WLDEL 280



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 82/141 (58%), Gaps = 7/141 (4%)

Query: 59  LEELNANFN----KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLN 114
           +E++N   N    KL+ LPD  G ++  +K L++  N +  +P  +  +TS+ +L+  +N
Sbjct: 1   MEKMNMKINLAQMKLKTLPDFNGSQIKGIKDLNLYDNDLREIPTEIFQMTSIEILNISVN 60

Query: 115 CLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVE-LDVSYNKITTLPDSIGC 173
            + +LP ++ NL NL +L+   N  +++ +P  IG L+++ + L   +N++ ++P  IG 
Sbjct: 61  KINNLPAEITNLKNLRMLDAGHN--HIDLIPPEIGHLVNMEDYLYFHHNQLQSIPPEIGQ 118

Query: 174 LRKLQKLSLEGNPLVSPPMDV 194
           L K++ L+L  N L   P ++
Sbjct: 119 LTKVRYLNLSDNLLSGLPEEI 139


>gi|328875780|gb|EGG24144.1| leucine-rich repeat-containing protein [Dictyostelium fasciculatum]
          Length = 2671

 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 113/207 (54%), Gaps = 4/207 (1%)

Query: 2    IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
            +P+ L   L  +V LD+   Q+  +   +   + L  L++S   + SLP+ I     LE 
Sbjct: 1133 VPDVLD-HLTTLVELDMSKCQVASIKIPLASKATLTSLNLSHTDITSLPEEIGELIHLEN 1191

Query: 62   LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
            LN   N L  LP T    L  LKTLS+  N+   LP  +  L+ L+ L    N + SLP 
Sbjct: 1192 LNLGHNLLSLLPPTFA-NLSKLKTLSMEGNQFTSLPNEILQLSQLQELILENNLIGSLPS 1250

Query: 122  DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            D+ +L NL +LN+  N   L+ LP SIG L +L  L+++ N IT L  ++G L  L +L 
Sbjct: 1251 DINHLSNLRILNLRLN--KLDILPASIGQLSNLTILNLAQNAITQLRPTMGLLSGLSELK 1308

Query: 182  LEGNPLVSPPMDVVEQGLSAVKGYLSE 208
            L+GNPL +PP +++ QGL A+  YL +
Sbjct: 1309 LDGNPLRTPPPEILHQGLQAILDYLKD 1335



 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 93/218 (42%), Gaps = 62/218 (28%)

Query: 36   LKVLDVSGNLLESLPKT---IENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNK 92
            L +LD+S   L  LP++   +    +L +L+   N L  +P      ++NL+ L++  N+
Sbjct: 1019 LTMLDLSSLRLYMLPESKFALRKMTNLVQLSLAKNNLNTIPIGCFSSMVNLEVLNLEENQ 1078

Query: 93   IV--------ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
            IV        +L QSL +LT   VL+   N    LP  L     L+VL+I  N    + +
Sbjct: 1079 IVSMSPLNVALLAQSLPNLT---VLNLGSNQFDDLPMTLTKFAKLQVLSIPNN--KFDRV 1133

Query: 145  PYSIGLLMSLVELDV-----------------------SYNKITTLPDSIG--------- 172
            P  +  L +LVELD+                       S+  IT+LP+ IG         
Sbjct: 1134 PDVLDHLTTLVELDMSKCQVASIKIPLASKATLTSLNLSHTDITSLPEEIGELIHLENLN 1193

Query: 173  --------------CLRKLQKLSLEGNPLVSPPMDVVE 196
                           L KL+ LS+EGN   S P ++++
Sbjct: 1194 LGHNLLSLLPPTFANLSKLKTLSMEGNQFTSLPNEILQ 1231


>gi|421129193|ref|ZP_15589396.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410359583|gb|EKP06675.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 237

 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 77/195 (39%), Positives = 111/195 (56%), Gaps = 3/195 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++   +LK LP  IG L  L+ LD+  NLL +LPK IE  ++L+ LN   ++L 
Sbjct: 44  LDVRVLNLSEQKLKTLPKEIGQLQNLQTLDLRNNLLTTLPKEIERLQNLQTLNLINSQLM 103

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG     L+ L ++ N++  LP+ +  L  LR L    N LK+LP ++  L NL+
Sbjct: 104 TLPKEIGQLQN-LQQLELDYNRLYTLPKEIGRLKKLRTLSLWGNRLKTLPNEIGQLKNLQ 162

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++S  +  L+TLP  I  L +L ELD+  N +TTLP  IG L+ LQKL L  N L S 
Sbjct: 163 RLHLS--YNQLKTLPNEIEQLQNLQELDLRNNLLTTLPKGIGQLKNLQKLDLRNNELSSE 220

Query: 191 PMDVVEQGLSAVKGY 205
               + + L   + Y
Sbjct: 221 KKKRIRKLLPKCQIY 235



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 77/129 (59%), Gaps = 1/129 (0%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RL N+  L++ ++QL  LP  IG L  L+ L++  N L +LPK I   + L  L+   N+
Sbjct: 88  RLQNLQTLNLINSQLMTLPKEIGQLQNLQQLELDYNRLYTLPKEIGRLKKLRTLSLWGNR 147

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L+ LP+ IG +L NL+ L ++ N++  LP  +  L +L+ LD R N L +LP+ +  L N
Sbjct: 148 LKTLPNEIG-QLKNLQRLHLSYNQLKTLPNEIEQLQNLQELDLRNNLLTTLPKGIGQLKN 206

Query: 129 LEVLNISQN 137
           L+ L++  N
Sbjct: 207 LQKLDLRNN 215


>gi|359683883|ref|ZP_09253884.1| lipoprotein, partial [Leptospira santarosai str. 2000030832]
          Length = 332

 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 107/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  +  L + +NQL+ LP  IG L  LK L +  N LES PK I    +L+ L+  +N
Sbjct: 86  GKLQRLEWLGLTNNQLRILPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYN 145

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP  IG  L  L  L++  N++  LPQ +  L  L  L+   N L +LP+++  L 
Sbjct: 146 RFTTLPKEIG-TLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQ 204

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L ++ N   L TLP  IG L +L +LD+S N++ TLP+ IG L++L+ LSL+ N L
Sbjct: 205 KLQHLYLANN--QLATLPQEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQL 262

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 263 RTLPQEI 269



 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 111/193 (57%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  RL N+  L+V +NQL  LP  IG L  L+ L++  N L +LPK I   + LE 
Sbjct: 12  LPEEI-GRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKEIGTLQKLEW 70

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+L  LP  IG +L  L+ L +  N++ ILPQ +  L +L+ L    N L+S P+
Sbjct: 71  LYLTNNQLATLPKEIG-KLQRLEWLGLTNNQLRILPQEIGKLQNLKELILENNRLESFPK 129

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L NL+ L++  N     TLP  IG L  L  L++ +N++TTLP  IG L +L+ L+
Sbjct: 130 EIGTLSNLQRLHLEYN--RFTTLPKEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLN 187

Query: 182 LEGNPLVSPPMDV 194
           L  N L + P ++
Sbjct: 188 LYNNRLATLPKEI 200



 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/195 (35%), Positives = 107/195 (54%), Gaps = 4/195 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +  +L N+  L + +N+L+  P  IG LS L+ L +  N   +LPK I     L 
Sbjct: 103 ILPQEI-GKLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNRFTTLPKEIGTLHRLP 161

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            LN   N+L  LP  IG  L  L+ L++  N++  LP+ +  L  L+ L    N L +LP
Sbjct: 162 WLNLEHNQLTTLPQEIG-RLERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANNQLATLP 220

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++  L NL+ L++S N   L TLP  IG L  L  L +  N++ TLP  IG L+ L+ L
Sbjct: 221 QEIGQLQNLKDLDLSDN--QLVTLPEEIGTLQRLEWLSLKNNQLRTLPQEIGQLQNLKDL 278

Query: 181 SLEGNPLVSPPMDVV 195
            L GNP  + P ++V
Sbjct: 279 DLSGNPFTTFPQEIV 293



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 98/179 (54%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  NQL  LP  IG L  L+ L+V  N L +LP+ I   ++L+ LN   N+L  LP  
Sbjct: 2   LRLAYNQLTTLPEEIGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKE 61

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L  L+ L +  N++  LP+ +  L  L  L    N L+ LP+++  L NL+ L + 
Sbjct: 62  IG-TLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLTNNQLRILPQEIGKLQNLKELILE 120

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   LE+ P  IG L +L  L + YN+ TTLP  IG L +L  L+LE N L + P ++
Sbjct: 121 NN--RLESFPKEIGTLSNLQRLHLEYNRFTTLPKEIGTLHRLPWLNLEHNQLTTLPQEI 177


>gi|398341358|ref|ZP_10526061.1| leucine-rich repeat protein [Leptospira kirschneri serovar Bim str.
           1051]
          Length = 248

 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/195 (40%), Positives = 111/195 (56%), Gaps = 3/195 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++   +LK LP  IG L  L+ LD+  NLL +LPK IE  ++L+ LN   ++L 
Sbjct: 44  LDVRVLNLSEQKLKTLPKEIGQLQNLQTLDLRNNLLTTLPKEIERLQNLQTLNLINSQLM 103

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG    NL+ L ++ N++  LP+ +  L  LR L    N LK+LP ++  L NL+
Sbjct: 104 TLPKEIGQL-QNLQQLELDYNRLYTLPKEIGRLKKLRTLSLWGNRLKTLPNEIRQLKNLQ 162

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++S N   L+TLP  I  L +L ELD+  N +TT P  IG L+ LQKL L  N L S 
Sbjct: 163 RLHLSYN--QLKTLPNEIEQLQNLQELDLRNNLLTTFPKGIGQLKNLQKLDLRNNELSSE 220

Query: 191 PMDVVEQGLSAVKGY 205
               + + L   + Y
Sbjct: 221 EQGRIRKLLPKCQIY 235



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 75/129 (58%), Gaps = 1/129 (0%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RL N+  L++ ++QL  LP  IG L  L+ L++  N L +LPK I   + L  L+   N+
Sbjct: 88  RLQNLQTLNLINSQLMTLPKEIGQLQNLQQLELDYNRLYTLPKEIGRLKKLRTLSLWGNR 147

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L+ LP+ I  +L NL+ L ++ N++  LP  +  L +L+ LD R N L + P+ +  L N
Sbjct: 148 LKTLPNEIR-QLKNLQRLHLSYNQLKTLPNEIEQLQNLQELDLRNNLLTTFPKGIGQLKN 206

Query: 129 LEVLNISQN 137
           L+ L++  N
Sbjct: 207 LQKLDLRNN 215


>gi|417782200|ref|ZP_12429933.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410777793|gb|EKR62438.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 381

 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 136/251 (54%), Gaps = 11/251 (4%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  LD+  NQLK LP  IG L  L+VL++S N L +LPK I+  ++L+ LN + N+L  
Sbjct: 71  NLKQLDLSDNQLKVLPKEIGQLQNLQVLNLSANNLINLPKEIDQLQNLKRLNLSGNRLTT 130

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L  L+ L ++ N++ +LP+ +  L +L+ L    N L +LPE++  L   E 
Sbjct: 131 LPQEIG-QLKKLEWLHVSHNRLTVLPKEIGQLQNLKELLLYGNSLTTLPEEIGQLQKFER 189

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N   L TLP  +  L +L ++ +  N++T+LP  IG L KL  L L  N L + P
Sbjct: 190 LYLHDN--QLTTLPQGLCKLQNLEQIYLHQNRLTSLPQEIGQLGKLWTLYLYSNELTTLP 247

Query: 192 MDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGALRNHRSEERERFIMS 250
            ++ + Q L      L+ K+NN    PK+   +G+L K    + +     S  +E   + 
Sbjct: 248 EEIGQLQNLRQ----LNLKLNNLTTLPKE---IGQLQKLDNLDLSDNQLTSIPKEIGQLQ 300

Query: 251 DFRAIDGLASP 261
           + R +D   +P
Sbjct: 301 NLRWLDLSGNP 311



 Score =  100 bits (250), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/208 (37%), Positives = 109/208 (52%), Gaps = 24/208 (11%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L++  N+L  LP  IG L KL+ L VS N L  LPK I   ++L+EL    N 
Sbjct: 114 QLQNLKRLNLSGNRLTTLPQEIGQLKKLEWLHVSHNRLTVLPKEIGQLQNLKELLLYGNS 173

Query: 69  LRQLPDTIG----FE------------------LINLKTLSINCNKIVILPQSLTHLTSL 106
           L  LP+ IG    FE                  L NL+ + ++ N++  LPQ +  L  L
Sbjct: 174 LTTLPEEIGQLQKFERLYLHDNQLTTLPQGLCKLQNLEQIYLHQNRLTSLPQEIGQLGKL 233

Query: 107 RVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITT 166
             L    N L +LPE++  L NL  LN+  N   L TLP  IG L  L  LD+S N++T+
Sbjct: 234 WTLYLYSNELTTLPEEIGQLQNLRQLNLKLN--NLTTLPKEIGQLQKLDNLDLSDNQLTS 291

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +P  IG L+ L+ L L GNPLV  P ++
Sbjct: 292 IPKEIGQLQNLRWLDLSGNPLVILPKEI 319



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 107/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL++ +N L  LP  I  L  LK L++SGN L +LP+ I   + LE L+ + N
Sbjct: 90  GQLQNLQVLNLSANNLINLPKEIDQLQNLKRLNLSGNRLTTLPQEIGQLKKLEWLHVSHN 149

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NLK L +  N +  LP+ +  L     L    N L +LP+ L  L 
Sbjct: 150 RLTVLPKEIG-QLQNLKELLLYGNSLTTLPEEIGQLQKFERLYLHDNQLTTLPQGLCKLQ 208

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NLE + + QN   L +LP  IG L  L  L +  N++TTLP+ IG L+ L++L+L+ N L
Sbjct: 209 NLEQIYLHQN--RLTSLPQEIGQLGKLWTLYLYSNELTTLPEEIGQLQNLRQLNLKLNNL 266

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 267 TTLPKEI 273



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 103/188 (54%), Gaps = 3/188 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           ++V VL+++  QL  LP  I     LK LD+S N L+ LPK I   ++L+ LN + N L 
Sbjct: 47  MDVRVLNLNERQLTVLPKEIEKFQNLKQLDLSDNQLKVLPKEIGQLQNLQVLNLSANNLI 106

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  I  +L NLK L+++ N++  LPQ +  L  L  L    N L  LP+++  L NL+
Sbjct: 107 NLPKEID-QLQNLKRLNLSGNRLTTLPQEIGQLKKLEWLHVSHNRLTVLPKEIGQLQNLK 165

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +  N   L TLP  IG L     L +  N++TTLP  +  L+ L+++ L  N L S 
Sbjct: 166 ELLLYGN--SLTTLPEEIGQLQKFERLYLHDNQLTTLPQGLCKLQNLEQIYLHQNRLTSL 223

Query: 191 PMDVVEQG 198
           P ++ + G
Sbjct: 224 PQEIGQLG 231



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 69/120 (57%), Gaps = 7/120 (5%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L  +  L ++SN+L  LP  IG L  L+ L++  N L +LPK I   + L+ 
Sbjct: 223 LPQEI-GQLGKLWTLYLYSNELTTLPEEIGQLQNLRQLNLKLNNLTTLPKEIGQLQKLDN 281

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L  +P  IG +L NL+ L ++ N +VILP+ +  L +L  L      +K +P+
Sbjct: 282 LDLSDNQLTSIPKEIG-QLQNLRWLDLSGNPLVILPKEIGQLKNLYFL-----AMKGIPD 335



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++  +   +RVL+     L  LP+++E   NL+ L++S N   L+ LP  IG L +L 
Sbjct: 39  LTEAFKNPMDVRVLNLNERQLTVLPKEIEKFQNLKQLDLSDN--QLKVLPKEIGQLQNLQ 96

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L++S N +  LP  I  L+ L++L+L GN L + P ++
Sbjct: 97  VLNLSANNLINLPKEIDQLQNLKRLNLSGNRLTTLPQEI 135



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 2/112 (1%)

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
            ++++I   K  I+P  +     L+         ++L E  +N +++ VLN+  N + L 
Sbjct: 3   FQSVNIRFKKRFIIPLLICLFCKLQAQSNEGQTYRTLTEAFKNPMDVRVLNL--NERQLT 60

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LP  I    +L +LD+S N++  LP  IG L+ LQ L+L  N L++ P ++
Sbjct: 61  VLPKEIEKFQNLKQLDLSDNQLKVLPKEIGQLQNLQVLNLSANNLINLPKEI 112


>gi|418677883|ref|ZP_13239157.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|418687625|ref|ZP_13248784.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|400321073|gb|EJO68933.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|410737949|gb|EKQ82688.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 288

 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 92/240 (38%), Positives = 133/240 (55%), Gaps = 14/240 (5%)

Query: 12  NVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +V+VL   D   N LK LP  IG L  LK L +S N + +LP  I N ++L+ L+ N N+
Sbjct: 48  DVLVLRYRDNEDNPLKTLPKEIGNLKNLKELYLSTNEITTLPSEIGNLKNLQVLSLNVNR 107

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  +P  IG  L NLK LSI  NK+  LP+ + +L +L+ L    N LK LP+++ NL  
Sbjct: 108 LETIPKEIG-NLKNLKELSIGLNKLKTLPKEIGNLKNLKELYLSRNQLKVLPQEIWNLKK 166

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ +++S N   L  LP  I  L  L+E+ +  N+ TTLP  IG L+ L++L L  N L+
Sbjct: 167 LQRMHLSTN--ELTKLPQEIKNLEGLIEIYLYDNQFTTLPKEIGNLKNLKELYLSRNQLI 224

Query: 189 SPPMDVVEQGLSAVKG-YLSEKMNNDHKSPKKKSWVGKLVKYGTFNGALRNHRSEERERF 247
           S P ++    L  +K  YL E  N   K PK+ + + KL +  +  G      SEE+ER 
Sbjct: 225 SLPSEI--GNLKNLKELYLEE--NQLTKLPKQIAALKKLSRL-SLEG--NQFPSEEKERI 277



 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/188 (37%), Positives = 111/188 (59%), Gaps = 3/188 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L + +N++  LP+ IG L  L+VL ++ N LE++PK I N ++L+EL+   N
Sbjct: 70  GNLKNLKELYLSTNEITTLPSEIGNLKNLQVLSLNVNRLETIPKEIGNLKNLKELSIGLN 129

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL+ LP  IG  L NLK L ++ N++ +LPQ + +L  L+ +    N L  LP++++NL 
Sbjct: 130 KLKTLPKEIG-NLKNLKELYLSRNQLKVLPQEIWNLKKLQRMHLSTNELTKLPQEIKNLE 188

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L  + +  N     TLP  IG L +L EL +S N++ +LP  IG L+ L++L LE N L
Sbjct: 189 GLIEIYLYDN--QFTTLPKEIGNLKNLKELYLSRNQLISLPSEIGNLKNLKELYLEENQL 246

Query: 188 VSPPMDVV 195
              P  + 
Sbjct: 247 TKLPKQIA 254


>gi|168269502|dbj|BAG09878.1| leucine-rich repeat protein SHOC-2 [synthetic construct]
          Length = 582

 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 112/196 (57%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+   L  +  L ++SN+L+ LP  +GCL  L  L +S N L SLP +++N + L 
Sbjct: 114 ILPSSI-KELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLR 172

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKLR++P  + + L +L TL +  N+I  + + + +L+ L +L  R N +K LP
Sbjct: 173 MLDLRHNKLREIPSVV-YRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLP 231

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG    +  LD+ +N++  LPD+IG L  L +L
Sbjct: 232 AEIGELCNLITLDVAHN--QLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRL 289

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N L + P  + +
Sbjct: 290 GLRYNRLSAIPRSLAK 305



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 102/185 (55%), Gaps = 12/185 (6%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  +  L+   N+L  LPD
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEVLN 133
           TIG  L +L  L +  N++  +P+SL   ++L  L+   N + +LPE  L +L+ L  L 
Sbjct: 279 TIG-NLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLT 337

Query: 134 ISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNPLV 188
           +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N L 
Sbjct: 338 LARNCFQL-----YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLT 392

Query: 189 SPPMD 193
           S P+D
Sbjct: 393 SLPLD 397



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 89/160 (55%), Gaps = 2/160 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           ++V L++ +NQL  +P  +  L  L+VL +S NLL+ LP  + N R L EL+   NKL  
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ I + L +L+ L +  N++  LP+ + HLT+L  L    N L  LPE++  L NLE 
Sbjct: 463 LPNEIAY-LKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEE 521

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           L ++ N   L +LP  + L   L  + +    ++ LP  I
Sbjct: 522 LYLNDN-PNLHSLPLELALCSKLSIMSIENCPLSHLPPQI 560



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 103/187 (55%), Gaps = 9/187 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 357 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  L +L  LR LD   N L+SLP ++  L +L
Sbjct: 415 TKIPEDVSG-LVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP-LV 188
           + L ++ N   L TLP  IG L +L  L +  N +T LP+ IG L  L++L L  NP L 
Sbjct: 474 QKLVLTNN--QLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLH 531

Query: 189 SPPMDVV 195
           S P+++ 
Sbjct: 532 SLPLELA 538



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N+L  LP++IG LS L  L +  N L ++P+++  C +LEELN   N +  L
Sbjct: 263 ITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTL 322

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+++   L+ L +L++  NC                                        
Sbjct: 323 PESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLS 382

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N L  +PED+  L++LEVL +S N   L+ L
Sbjct: 383 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKL 440

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ +G L  L ELD+  NK+ +LP+ I  L+ LQKL L  N L + P  +
Sbjct: 441 PHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L ++   I ILP S+  LT L  L    N L+SLP ++  L+NL  L +S+N   L +LP
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLP 162

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            S+  L  L  LD+ +NK+  +P  +  L  L  L L  N + +   D+
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 211


>gi|156550592|ref|XP_001603998.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Nasonia
           vitripennis]
          Length = 582

 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/182 (37%), Positives = 108/182 (59%), Gaps = 3/182 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L ++V   ++ N+L  LP  IGCL+ LK L +S N L SLP T+EN + L+ L+   NKL
Sbjct: 123 LTHLVEFYLYGNKLVTLPPEIGCLANLKTLALSENSLTSLPDTLENLKQLKVLDLRHNKL 182

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++PD + ++L +L TL +  N++  +  ++ +LT+L +L  R N +K LP  +  L NL
Sbjct: 183 NEIPDVV-YKLTSLTTLFLRFNRVRYVSDNIRNLTNLTMLSLRENKIKELPAGIGKLTNL 241

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
              ++S N  +LE LP  IG    L  LD+ +N++  +P++IG L  + +L L  N L S
Sbjct: 242 VTFDVSHN--HLEHLPAEIGNCDQLSTLDLQHNELLDIPETIGNLVSVTRLGLRYNRLSS 299

Query: 190 PP 191
            P
Sbjct: 300 IP 301



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 114/255 (44%), Gaps = 73/255 (28%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVS-----------GNL----------- 45
            +L N+V  DV  N L+ LP  IG   +L  LD+            GNL           
Sbjct: 236 GKLTNLVTFDVSHNHLEHLPAEIGNCDQLSTLDLQHNELLDIPETIGNLVSVTRLGLRYN 295

Query: 46  -LESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ------ 98
            L S+PK++ NC+ ++E +   N++ QLPD +   L NLKT++++ N     P       
Sbjct: 296 RLSSIPKSLANCKLMDEFSVEGNQVSQLPDGLLSSLSNLKTITLSRNAFTAYPSGGPSQF 355

Query: 99  ------SLTH----------------LTSLRVLDARL--------------------NCL 116
                 +L H                LT L + + +L                    N L
Sbjct: 356 TNVYSINLEHNKIDKIPYGIFSRAKNLTKLNMKENQLTALPLDTGTWINMVELNLGTNQL 415

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
             +P+D++ L NLE+L +S N   L+ +P SI  L  L  LD+  NKI +LP+ IG LR 
Sbjct: 416 VKIPDDIQYLQNLEILILSNNL--LKRIPASIASLSKLRVLDLEENKIESLPNEIGFLRD 473

Query: 177 LQKLSLEGNPLVSPP 191
           LQKL L+ N + S P
Sbjct: 474 LQKLILQSNQVTSLP 488



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 96/176 (54%), Gaps = 3/176 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  + +  LPNS+  L+ L    + GN L +LP  I    +L+ L  + N L  LPDT
Sbjct: 106 LDLSKSSITNLPNSVRDLTHLVEFYLYGNKLVTLPPEIGCLANLKTLALSENSLTSLPDT 165

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           +   L  LK L +  NK+  +P  +  LTSL  L  R N ++ + +++ NL NL +L++ 
Sbjct: 166 LE-NLKQLKVLDLRHNKLNEIPDVVYKLTSLTTLFLRFNRVRYVSDNIRNLTNLTMLSLR 224

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           +N   ++ LP  IG L +LV  DVS+N +  LP  IG   +L  L L+ N L+  P
Sbjct: 225 EN--KIKELPAGIGKLTNLVTFDVSHNHLEHLPAEIGNCDQLSTLDLQHNELLDIP 278



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/165 (33%), Positives = 94/165 (56%), Gaps = 2/165 (1%)

Query: 7   TARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANF 66
           T   +N+V L++ +NQL  +P+ I  L  L++L +S NLL+ +P +I +   L  L+   
Sbjct: 399 TGTWINMVELNLGTNQLVKIPDDIQYLQNLEILILSNNLLKRIPASIASLSKLRVLDLEE 458

Query: 67  NKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENL 126
           NK+  LP+ IGF L +L+ L +  N++  LP+++ HLT+L  L    N L  LPE++  L
Sbjct: 459 NKIESLPNEIGF-LRDLQKLILQSNQVTSLPRAIGHLTNLTHLSVGENNLNYLPEEIGTL 517

Query: 127 INLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
            NL+ L I+ N   L  LP+ + L  +L  + +    ++ +P  I
Sbjct: 518 ENLDCLYINDNAN-LHNLPFELALCTNLSIMSIENCPLSQIPPEI 561



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 115/239 (48%), Gaps = 30/239 (12%)

Query: 3   PESLTARLLNVVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEE 61
           P    ++  NV  +++  N++  +P  I   +K L  L++  N L +LP       ++ E
Sbjct: 348 PSGGPSQFTNVYSINLEHNKIDKIPYGIFSRAKNLTKLNMKENQLTALPLDTGTWINMVE 407

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N+L ++PD I + L NL+ L ++ N +  +P S+  L+ LRVLD   N ++SLP 
Sbjct: 408 LNLGTNQLVKIPDDIQY-LQNLEILILSNNLLKRIPASIASLSKLRVLDLEENKIESLPN 466

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL- 180
           ++  L +L+ L +  N   + +LP +IG L +L  L V  N +  LP+ IG L  L  L 
Sbjct: 467 EIGFLRDLQKLILQSN--QVTSLPRAIGHLTNLTHLSVGENNLNYLPEEIGTLENLDCLY 524

Query: 181 -----------------------SLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKS 216
                                  S+E  PL   P ++V  G S V  +L  KM   ++S
Sbjct: 525 INDNANLHNLPFELALCTNLSIMSIENCPLSQIPPEIVAGGPSLVIQFL--KMQGPYRS 581



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 102/195 (52%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNS-IGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +P+ L + L N+  + +  N     P+      + +  +++  N ++ +P  I    ++L
Sbjct: 323 LPDGLLSSLSNLKTITLSRNAFTAYPSGGPSQFTNVYSINLEHNKIDKIPYGIFSRAKNL 382

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP   G   IN+  L++  N++V +P  + +L +L +L    N LK +
Sbjct: 383 TKLNMKENQLTALPLDTG-TWINMVELNLGTNQLVKIPDDIQYLQNLEILILSNNLLKRI 441

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  + +L  L VL++ +N   +E+LP  IG L  L +L +  N++T+LP +IG L  L  
Sbjct: 442 PASIASLSKLRVLDLEEN--KIESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTH 499

Query: 180 LSLEGNPLVSPPMDV 194
           LS+  N L   P ++
Sbjct: 500 LSVGENNLNYLPEEI 514



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 5/141 (3%)

Query: 56  CR--SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL 113
           CR    + L+ + + +  LP+++  +L +L    +  NK+V LP  +  L +L+ L    
Sbjct: 98  CRDEGFKRLDLSKSSITNLPNSVR-DLTHLVEFYLYGNKLVTLPPEIGCLANLKTLALSE 156

Query: 114 NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGC 173
           N L SLP+ LENL  L+VL++  N   L  +P  +  L SL  L + +N++  + D+I  
Sbjct: 157 NSLTSLPDTLENLKQLKVLDLRHN--KLNEIPDVVYKLTSLTTLFLRFNRVRYVSDNIRN 214

Query: 174 LRKLQKLSLEGNPLVSPPMDV 194
           L  L  LSL  N +   P  +
Sbjct: 215 LTNLTMLSLRENKIKELPAGI 235



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 106/240 (44%), Gaps = 49/240 (20%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L ++  L +  N+++ + ++I  L+ L +L +  N ++ LP  I    +L  
Sbjct: 185 IPD-VVYKLTSLTTLFLRFNRVRYVSDNIRNLTNLTMLSLRENKIKELPAGIGKLTNLVT 243

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
            + + N L  LP  IG     L TL +  N+++ +P+++ +L S+  L  R N L S+P+
Sbjct: 244 FDVSHNHLEHLPAEIG-NCDQLSTLDLQHNELLDIPETIGNLVSVTRLGLRYNRLSSIPK 302

Query: 122 DLEN------------------------LINLEVLNISQN-------------------- 137
            L N                        L NL+ + +S+N                    
Sbjct: 303 SLANCKLMDEFSVEGNQVSQLPDGLLSSLSNLKTITLSRNAFTAYPSGGPSQFTNVYSIN 362

Query: 138 --FQYLETLPYSI-GLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
                ++ +PY I     +L +L++  N++T LP   G    + +L+L  N LV  P D+
Sbjct: 363 LEHNKIDKIPYGIFSRAKNLTKLNMKENQLTALPLDTGTWINMVELNLGTNQLVKIPDDI 422


>gi|421123429|ref|ZP_15583709.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410343480|gb|EKO94711.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 267

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 101/183 (55%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L++  NQL  LP  IG L  L+VL+++GN   SLPK I   ++LE L+ + N+   
Sbjct: 18  NLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTS 77

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L  L+ L++  N+   LP+ +  L  LRVL+   N   SLP+++  L  LE 
Sbjct: 78  LPKEIG-QLQKLRVLNLAGNQFTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQKLEA 136

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LN+  N       P  I    SL  L +S +++ TLP  I  L+ LQ L L+GN L S P
Sbjct: 137 LNLDHN--RFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLTSLP 194

Query: 192 MDV 194
            ++
Sbjct: 195 KEI 197



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 101/178 (56%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQ   LP  IG L KL+VL+++GN   SLPK I   + L  LN   N
Sbjct: 60  GQLQNLERLDLDGNQFTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQKLRVLNLAGN 119

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP  IG +L  L+ L+++ N+  I P+ +    SL+ L    + LK+LP+++  L 
Sbjct: 120 QFTSLPKEIG-QLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQ 178

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ L++  N   L +LP  IG L +L EL++  NK+ TLP  I  L+ LQ L L  N
Sbjct: 179 NLQSLHLDGN--QLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSN 234



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 96/175 (54%), Gaps = 3/175 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           ++L+ LP  IG    L+ L++ GN L SLPK I   ++L  LN   N+   LP  IG +L
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG-QL 62

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            NL+ L ++ N+   LP+ +  L  LRVL+   N   SLP+++  L  L VLN++ N   
Sbjct: 63  QNLERLDLDGNQFTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQKLRVLNLAGN--Q 120

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
             +LP  IG L  L  L++ +N+ T  P  I   + L+ L L G+ L + P +++
Sbjct: 121 FTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEIL 175



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 2/82 (2%)

Query: 113 LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
           L+ L+SLP  +    NLE LN+  N   L +LP  IG L +L  L+++ N+ T+LP  IG
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGN--QLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60

Query: 173 CLRKLQKLSLEGNPLVSPPMDV 194
            L+ L++L L+GN   S P ++
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEI 82


>gi|71895087|ref|NP_001026407.1| leucine-rich repeat protein SHOC-2 [Gallus gallus]
 gi|82231244|sp|Q5F4C4.1|SHOC2_CHICK RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|60098359|emb|CAH65010.1| hypothetical protein RCJMB04_1b13 [Gallus gallus]
          Length = 529

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 110/196 (56%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+P S    L  +  L ++SN+L+ LP  +GCL  L  L +S N L SLP +++N + L 
Sbjct: 114 MLP-SAVKELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLR 172

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKLR++P  + + L +L TL +  N+I  + + +  L+ L +L  R N +K LP
Sbjct: 173 MLDLRHNKLREIPSVV-YRLTSLATLYLRFNRITTVEKDIKTLSKLTMLSIRENKIKQLP 231

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG    +  LD+ +N++  LP++IG L  L +L
Sbjct: 232 AEIGELCNLITLDVAHN--QLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRL 289

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N L + P  + +
Sbjct: 290 GLRYNRLSAIPKSLAK 305



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 106/230 (46%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N+L  LP +IG LS L  L +  N L ++PK++  C  L+ELN   N +  L
Sbjct: 263 ITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISTL 322

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+ +   L+ L +L++  NC                                        
Sbjct: 323 PEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLS 382

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N L  +PED+  L++LEVL +S N   L+ L
Sbjct: 383 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKL 440

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ IG L  L ELD+  NK+ +LP+ I  L+ LQKL L  N L + P  +
Sbjct: 441 PHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/111 (39%), Positives = 66/111 (59%), Gaps = 1/111 (0%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +V L++ +NQL  +P  +  L  L+VL +S NLL+ LP  I N R L EL+   NKL  L
Sbjct: 404 MVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESL 463

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDL 123
           P+ I + L +L+ L +  N++  LP+ + HLT+L  L    N L  LPE++
Sbjct: 464 PNEIAY-LKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEI 513



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 89/163 (54%), Gaps = 8/163 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 357 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  + +L  LR LD   N L+SLP ++  L +L
Sbjct: 415 TKIPEDVSG-LVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDL 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
           + L ++ N   L TLP  IG L +L  L +  N +T LP+ IG
Sbjct: 474 QKLVLTNN--QLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIG 514



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 9/197 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKV---LDVSGNLLESLPKTI-ENCR 57
           +PE L + L+ +  L +  N  +  P  +G  S+      L++  N +  +P  I    +
Sbjct: 322 LPEGLLSSLVKLTSLTLARNCFQSYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAK 379

Query: 58  SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK 117
            L +LN   N+L  LP   G    ++  L++  N++  +P+ ++ L SL VL    N LK
Sbjct: 380 VLSKLNMKDNQLTSLPLDFGT-WTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 438

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
            LP  + NL  L  L++ +N   LE+LP  I  L  L +L ++ N++TTLP  IG L  L
Sbjct: 439 KLPHGIGNLRKLRELDLEEN--KLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNL 496

Query: 178 QKLSLEGNPLVSPPMDV 194
             L L  N L   P ++
Sbjct: 497 THLGLGENLLTHLPEEI 513


>gi|456825485|gb|EMF73881.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 405

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/195 (37%), Positives = 115/195 (58%), Gaps = 4/195 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +T +L N+  L +  N+L  LP  IG L  L++LD+  N L  LPK I   ++L 
Sbjct: 203 ILPKEIT-QLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLL 261

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+ + N+L  LP  I  +L NL+ L++  N+    P+ +T   +L+VLD   N L  LP
Sbjct: 262 VLDLSGNQLTILPKEIT-QLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTILP 320

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E++  L NL+ L++S+N   L TLP  IG L  L  L + +N++ TLP+ I  L+ L+KL
Sbjct: 321 EEIGQLQNLQKLHLSRN--QLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKL 378

Query: 181 SLEGNPLVSPPMDVV 195
            L  NPL+S  ++ +
Sbjct: 379 YLHNNPLLSEKIERI 393



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/210 (36%), Positives = 112/210 (53%), Gaps = 24/210 (11%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGN--LLESLPKTIENCRSLEELNAN 65
            RL N+  L +  N+L  LP  IG L  L+ L + G       LPK I   ++L+EL+  
Sbjct: 161 GRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLK 220

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
           FN+L  LP  IG +L NL+ L +  N++ ILP+ +  L +L VLD   N L  LP+++  
Sbjct: 221 FNRLTVLPKEIG-QLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 279

Query: 126 LINLEVLNIS--------------QNFQYLE-------TLPYSIGLLMSLVELDVSYNKI 164
           L NL+ LN+               QN Q L+        LP  IG L +L +L +S N++
Sbjct: 280 LQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTILPEEIGQLQNLQKLHLSRNQL 339

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           TTLP  IG L+KL+ L L+ N L + P ++
Sbjct: 340 TTLPKEIGRLQKLESLGLDHNQLATLPEEI 369



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 107/187 (57%), Gaps = 1/187 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L+  +NQL  LP  IG L  L+ L +  N L +LP+ I   ++L+ L+ N N
Sbjct: 69  GQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNN 128

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+ L++  N++ ILP+ +  L +L+ L   LN L  LPE++  L 
Sbjct: 129 QLTTLPEEIG-KLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLE 187

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  L++    +    LP  I  L +L EL + +N++T LP  IG L+ L+ L L  N L
Sbjct: 188 SLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRL 247

Query: 188 VSPPMDV 194
              P ++
Sbjct: 248 TILPKEI 254



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 108/184 (58%), Gaps = 5/184 (2%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           V +LD+  ++LK LP  IG L  L++L+   N L +LPK I   ++L+EL+   N+L  L
Sbjct: 51  VRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTL 110

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P+ IG +L NLK L +N N++  LP+ +  L +L+ L+  +N L  LP+++  L NL+ L
Sbjct: 111 PEEIG-QLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQEL 169

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDV-SYNK-ITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            +S N   L  LP  IG L SL +L +   NK  T LP  I  L+ LQ+L L+ N L   
Sbjct: 170 YLSLN--RLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVL 227

Query: 191 PMDV 194
           P ++
Sbjct: 228 PKEI 231



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 64/165 (38%), Positives = 100/165 (60%), Gaps = 5/165 (3%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           +++++LD+S + L+ LPK I   ++L+ LN+  N+L  LP  IG +L NL+ L +  N++
Sbjct: 49  NEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIG-KLQNLQELHLQNNQL 107

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
             LP+ +  L +L+VL    N L +LPE++  L NL+ LN+  N   L  LP  IG L +
Sbjct: 108 TTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVN--RLNILPKEIGRLQN 165

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEG--NPLVSPPMDVVE 196
           L EL +S N++T LP+ IG L  L+KLSL G   P    P ++ +
Sbjct: 166 LQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQ 210


>gi|91091582|ref|XP_968188.1| PREDICTED: similar to shoc2 [Tribolium castaneum]
 gi|270001034|gb|EEZ97481.1| hypothetical protein TcasGA2_TC011315 [Tribolium castaneum]
          Length = 565

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 109/178 (61%), Gaps = 3/178 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L+++  L ++ N+L  LP  IGCL+ L+ L +S N L SLP ++ + +SL+ L+   NKL
Sbjct: 106 LIHLSELYLYGNKLVYLPLEIGCLTNLQTLALSENSLTSLPDSLMSLKSLKVLDLRHNKL 165

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             +PD + ++L +L TL +  N+I  +   +  LTSL +L  R N +K LP  +  L+NL
Sbjct: 166 NDIPDVV-YKLTSLTTLFLRFNRIRYVDDEIRFLTSLTMLSLRENKIKELPAGIGKLVNL 224

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
              ++S N  +LE LP  IG  ++L  LD+ +N++  +PD+IG L++L +L L  N L
Sbjct: 225 VTFDVSHN--HLEHLPEEIGQCINLSTLDLQHNELLDIPDTIGELQQLTRLGLRYNRL 280



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 106/205 (51%), Gaps = 27/205 (13%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+V L++ +NQL  LP+ I  L  L+VL +S NLL  +P ++ N R L  L+   N+L Q
Sbjct: 387 NMVELNLGTNQLGKLPDDIQALQALEVLVLSNNLLRRIPPSVGNLRKLRVLDLEENRLEQ 446

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ IG+ L +L+ L +  N++  LP+++ HL +L  L    N L  LPE++  L NLE 
Sbjct: 447 LPNEIGY-LRDLQRLIVQSNQLTSLPRAIGHLANLVFLSVGENNLAYLPEEIGTLENLES 505

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L ++ N   L  LP+ + L                      C   LQ +S+E  PL   P
Sbjct: 506 LYVNDN-PSLHNLPFELAL----------------------C-SNLQIMSIENCPLSQIP 541

Query: 192 MDVVEQGLSAVKGYLSEKMNNDHKS 216
            ++V  G S V  YL  KM   +++
Sbjct: 542 AEIVAGGPSLVIQYL--KMQGPYRA 564



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 113/238 (47%), Gaps = 51/238 (21%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  + +N+  LD+  N+L  +P++IG L +L  L +  N L  +P ++ NCR ++E
Sbjct: 237 LPEEI-GQCINLSTLDLQHNELLDIPDTIGELQQLTRLGLRYNRLSFIPSSLSNCRHMDE 295

Query: 62  LNANFNKLRQLPDTIGF------------------------ELINLKTLSINCNKIVILP 97
            N   N + QLP+ +                          +  N+ ++++  N+I  +P
Sbjct: 296 FNVEGNAISQLPEGLLSSLSELTSITLSRNNFAAYPSGGPSQFTNVDSINLEHNQIDKIP 355

Query: 98  QSL----THLTSLRVLDARL--------------------NCLKSLPEDLENLINLEVLN 133
             +     HLT L + + +L                    N L  LP+D++ L  LEVL 
Sbjct: 356 YGIFSRAKHLTKLNMKENQLTSLPLDVGTWTNMVELNLGTNQLGKLPDDIQALQALEVLV 415

Query: 134 ISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           +S N   L  +P S+G L  L  LD+  N++  LP+ IG LR LQ+L ++ N L S P
Sbjct: 416 LSNNL--LRRIPPSVGNLRKLRVLDLEENRLEQLPNEIGYLRDLQRLIVQSNQLTSLP 471



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/185 (34%), Positives = 99/185 (53%), Gaps = 4/185 (2%)

Query: 3   PESLTARLLNVVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEE 61
           P    ++  NV  +++  NQ+  +P  I   +K L  L++  N L SLP  +    ++ E
Sbjct: 331 PSGGPSQFTNVDSINLEHNQIDKIPYGIFSRAKHLTKLNMKENQLTSLPLDVGTWTNMVE 390

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N+L +LPD I   L  L+ L ++ N +  +P S+ +L  LRVLD   N L+ LP 
Sbjct: 391 LNLGTNQLGKLPDDIQ-ALQALEVLVLSNNLLRRIPPSVGNLRKLRVLDLEENRLEQLPN 449

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L+ L +  N   L +LP +IG L +LV L V  N +  LP+ IG L  L+ L 
Sbjct: 450 EIGYLRDLQRLIVQSN--QLTSLPRAIGHLANLVFLSVGENNLAYLPEEIGTLENLESLY 507

Query: 182 LEGNP 186
           +  NP
Sbjct: 508 VNDNP 512



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 98/202 (48%), Gaps = 28/202 (13%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LDV    L+C          LK LD+S + +  LP T+ +   L EL    NKL  LP  
Sbjct: 72  LDVSKEFLRCRDEG------LKRLDLSKSNITHLPPTVRDLIHLSELYLYGNKLVYLPLE 125

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L NL+TL+++ N +  LP SL  L SL+VLD R N L  +P+ +  L +L  L + 
Sbjct: 126 IGC-LTNLQTLALSENSLTSLPDSLMSLKSLKVLDLRHNKLNDIPDVVYKLTSLTTLFLR 184

Query: 136 QN-FQYLET--------------------LPYSIGLLMSLVELDVSYNKITTLPDSIGCL 174
            N  +Y++                     LP  IG L++LV  DVS+N +  LP+ IG  
Sbjct: 185 FNRIRYVDDEIRFLTSLTMLSLRENKIKELPAGIGKLVNLVTFDVSHNHLEHLPEEIGQC 244

Query: 175 RKLQKLSLEGNPLVSPPMDVVE 196
             L  L L+ N L+  P  + E
Sbjct: 245 INLSTLDLQHNELLDIPDTIGE 266



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 31/220 (14%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L ++ +L +  N++K LP  IG L  L   DVS N LE LP+ I  C +L  L+   N+L
Sbjct: 198 LTSLTMLSLRENKIKELPAGIGKLVNLVTFDVSHNHLEHLPEEIGQCINLSTLDLQHNEL 257

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDL------ 123
             +PDTIG EL  L  L +  N++  +P SL++   +   +   N +  LPE L      
Sbjct: 258 LDIPDTIG-ELQQLTRLGLRYNRLSFIPSSLSNCRHMDEFNVEGNAISQLPEGLLSSLSE 316

Query: 124 -------------------ENLINLEVLNISQNFQYLETLPYSI-GLLMSLVELDVSYNK 163
                                  N++ +N+  N   ++ +PY I      L +L++  N+
Sbjct: 317 LTSITLSRNNFAAYPSGGPSQFTNVDSINLEHN--QIDKIPYGIFSRAKHLTKLNMKENQ 374

Query: 164 ITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVK 203
           +T+LP  +G    + +L+L  N L   P D+  Q L A++
Sbjct: 375 LTSLPLDVGTWTNMVELNLGTNQLGKLPDDI--QALQALE 412



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 4/157 (2%)

Query: 39  LDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILP 97
           +++  N ++ +P  I    + L +LN   N+L  LP  +G    N+  L++  N++  LP
Sbjct: 344 INLEHNQIDKIPYGIFSRAKHLTKLNMKENQLTSLPLDVG-TWTNMVELNLGTNQLGKLP 402

Query: 98  QSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVEL 157
             +  L +L VL    N L+ +P  + NL  L VL++ +N   LE LP  IG L  L  L
Sbjct: 403 DDIQALQALEVLVLSNNLLRRIPPSVGNLRKLRVLDLEEN--RLEQLPNEIGYLRDLQRL 460

Query: 158 DVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            V  N++T+LP +IG L  L  LS+  N L   P ++
Sbjct: 461 IVQSNQLTSLPRAIGHLANLVFLSVGENNLAYLPEEI 497



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 30/219 (13%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L ++  L +  N+++ + + I  L+ L +L +  N ++ LP  I    +L  
Sbjct: 168 IPD-VVYKLTSLTTLFLRFNRIRYVDDEIRFLTSLTMLSLRENKIKELPAGIGKLVNLVT 226

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
            + + N L  LP+ IG + INL TL +  N+++ +P ++  L  L  L  R N L  +P 
Sbjct: 227 FDVSHNHLEHLPEEIG-QCINLSTLDLQHNELLDIPDTIGELQQLTRLGLRYNRLSFIPS 285

Query: 122 DLENLINLEVLNISQNFQYLETLP----------------------YSIGLLMSLVELD- 158
            L N  +++  N+  N   +  LP                      Y  G       +D 
Sbjct: 286 SLSNCRHMDEFNVEGN--AISQLPEGLLSSLSELTSITLSRNNFAAYPSGGPSQFTNVDS 343

Query: 159 --VSYNKITTLPDSIGCLRK-LQKLSLEGNPLVSPPMDV 194
             + +N+I  +P  I    K L KL+++ N L S P+DV
Sbjct: 344 INLEHNQIDKIPYGIFSRAKHLTKLNMKENQLTSLPLDV 382


>gi|359462332|ref|ZP_09250895.1| leucine-rich repeat-containing protein [Acaryochloris sp. CCMEE
           5410]
          Length = 407

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 81/235 (34%), Positives = 127/235 (54%), Gaps = 12/235 (5%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P++L  +L  + VLD+  N+L  L + +G LS+L+ LD++GN L  LP+ I     L  
Sbjct: 58  LPKAL-GQLTQLQVLDLARNRLPILTDVLGYLSQLQSLDLTGNALVELPEFIGAFSQLRS 116

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N+L  LP +IG +L NL+ L ++ N +   P+ L  LT LR L+     L  +P 
Sbjct: 117 LNLASNQLVHLPSSIG-KLKNLQELQLSYNSMAQWPEELGLLTGLRSLEITSTGLNEIPP 175

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
              +L  LE LN+S  F +L+TLP  +G L  L  LD+S+N+++ LP ++G L  L  L 
Sbjct: 176 AWRSLEGLESLNLS--FNHLKTLPEWLGTLTDLRSLDLSFNQLSELPAALGSLTPLTSLD 233

Query: 182 LEGNPLVS-PPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGA 235
           ++ N L S PP       L+++  Y      N+  +   ++W G+L    T   A
Sbjct: 234 IQSNQLQSLPPQICNLVNLTSLLAY------NNQLTHLPEAW-GRLAALTTLGIA 281



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 80/210 (38%), Positives = 110/210 (52%), Gaps = 9/210 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L   L ++  LD+  NQL  LP ++G L+ L  LD+  N L+SLP  I N  +L  
Sbjct: 196 LPEWL-GTLTDLRSLDLSFNQLSELPAALGSLTPLTSLDIQSNQLQSLPPQICNLVNLTS 254

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNC-----L 116
           L A  N+L  LP+  G  L  L TL I  N+I  LP+S+  L +L+     L+      L
Sbjct: 255 LLAYNNQLTHLPEAWG-RLAALTTLGIAGNRIRQLPESIGELQNLKQFIFNLDPDQPVPL 313

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           +  P  L     LE L        L +LP  IG L  L  L+VS+N +T LP S+G L  
Sbjct: 314 QVFPAALRGCRLLEQLTFVAC--ELRSLPPWIGELTQLKSLNVSHNNLTDLPLSLGTLDN 371

Query: 177 LQKLSLEGNPLVSPPMDVVEQGLSAVKGYL 206
           L+ L+L  NPL S    + E+G +A+K YL
Sbjct: 372 LKTLNLSNNPLRSELEVLWERGPNAIKNYL 401



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 32/220 (14%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ARL     LD+    L  LP+SIG LS+LK L +S N                       
Sbjct: 17  ARLQEAAELDLSDIGLSDLPDSIGSLSQLKSLYLSEN----------------------- 53

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L +LP  +G +L  L+ L +  N++ IL   L +L+ L+ LD   N L  LPE +    
Sbjct: 54  ELMRLPKALG-QLTQLQVLDLARNRLPILTDVLGYLSQLQSLDLTGNALVELPEFIGAFS 112

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L  LN++ N   L  LP SIG L +L EL +SYN +   P+ +G L  L+ L      +
Sbjct: 113 QLRSLNLASN--QLVHLPSSIGKLKNLQELQLSYNSMAQWPEELGLLTGLRSLE-----I 165

Query: 188 VSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
            S  ++ +     +++G  S  ++ +H     + W+G L 
Sbjct: 166 TSTGLNEIPPAWRSLEGLESLNLSFNHLKTLPE-WLGTLT 204


>gi|417785421|ref|ZP_12433125.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409951286|gb|EKO05801.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 408

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/195 (37%), Positives = 115/195 (58%), Gaps = 4/195 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +T +L N+  L +  N+L  LP  IG L  L++LD+  N L  LPK I   ++L 
Sbjct: 206 ILPKEIT-QLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLL 264

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+ + N+L  LP  I  +L NL+ L++  N+    P+ +T   +L+VLD   N L  LP
Sbjct: 265 VLDLSGNQLTILPKEIT-QLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTILP 323

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E++  L NL+ L++S+N   L TLP  IG L  L  L + +N++ TLP+ I  L+ L+KL
Sbjct: 324 EEIGQLQNLQKLHLSRN--QLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKL 381

Query: 181 SLEGNPLVSPPMDVV 195
            L  NPL+S  ++ +
Sbjct: 382 YLHNNPLLSEKIERI 396



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/210 (36%), Positives = 112/210 (53%), Gaps = 24/210 (11%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGN--LLESLPKTIENCRSLEELNAN 65
            RL N+  L +  N+L  LP  IG L  L+ L + G       LPK I   ++L+EL+  
Sbjct: 164 GRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLK 223

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
           FN+L  LP  IG +L NL+ L +  N++ ILP+ +  L +L VLD   N L  LP+++  
Sbjct: 224 FNRLTVLPKEIG-QLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 282

Query: 126 LINLEVLNIS--------------QNFQYLE-------TLPYSIGLLMSLVELDVSYNKI 164
           L NL+ LN+               QN Q L+        LP  IG L +L +L +S N++
Sbjct: 283 LQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTILPEEIGQLQNLQKLHLSRNQL 342

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           TTLP  IG L+KL+ L L+ N L + P ++
Sbjct: 343 TTLPKEIGRLQKLESLGLDHNQLATLPEEI 372



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 108/184 (58%), Gaps = 5/184 (2%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           V +LD+  ++LK LP  IG L  L++L+   N L +LPK I   ++L+EL+   N+L  L
Sbjct: 54  VRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTL 113

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P+ IG +L NLK L +N N++  LP+ +  L +L+ L+  +N L  LP+++  L NL+ L
Sbjct: 114 PEEIG-QLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQEL 172

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDV-SYNK-ITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            +S N   L  LP  IG L SL +L +   NK  T LP  I  L+ LQ+L L+ N L   
Sbjct: 173 YLSLN--RLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVL 230

Query: 191 PMDV 194
           P ++
Sbjct: 231 PKEI 234



 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 107/187 (57%), Gaps = 1/187 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L+  +NQL  LP  IG L  L+ L +  N L +LP+ I   ++L+ L+ N N
Sbjct: 72  GQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNN 131

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+ L++  N++ ILP+ +  L +L+ L   LN L  LPE++  L 
Sbjct: 132 QLTTLPEEIG-KLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLE 190

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  L++    +    LP  I  L +L EL + +N++T LP  IG L+ L+ L L  N L
Sbjct: 191 SLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRL 250

Query: 188 VSPPMDV 194
              P ++
Sbjct: 251 TILPKEI 257


>gi|427722688|ref|YP_007069965.1| small GTP-binding protein [Leptolyngbya sp. PCC 7376]
 gi|427354408|gb|AFY37131.1| small GTP-binding protein [Leptolyngbya sp. PCC 7376]
          Length = 1183

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 114/195 (58%), Gaps = 4/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+S  A L N+  LD+ SNQ+K +P+S G L+ L+ L++  N ++ +P +     SL++
Sbjct: 270 IPDSF-ATLKNLQKLDLGSNQIKKIPDSFGKLASLQQLNLGSNQIKKIPDSFGKLASLQQ 328

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + NK+ ++PD+    L+NL+ L +  N I  +P SL  L +L+ L    N +K +P+
Sbjct: 329 LNLSHNKIEEIPDSFA-TLVNLQQLYLYNNPIKEVPDSLATLVNLQQLGFSSNQIKEIPD 387

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L  L+NL+ L+IS N   ++ +P S+  L  L  L +S  +IT +PD +  L  LQ+L+
Sbjct: 388 SLATLVNLQQLDISSN--QIKEIPDSLAALTHLQNLGLSSTQITEIPDFLSTLVNLQQLN 445

Query: 182 LEGNPLVSPPMDVVE 196
           L  N +   P   V+
Sbjct: 446 LSFNQIKKIPDSFVK 460



 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 112/190 (58%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+SL A L+N+  L +++NQ+K +P+S+  LS L+ L ++ N ++ +P ++    SL++
Sbjct: 201 IPDSLAA-LVNLQQLYLYNNQIKEIPDSLAALSNLQRLQLNFNRIKKIPDSLAKLASLQQ 259

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ N N++ ++PD+    L NL+ L +  N+I  +P S   L SL+ L+   N +K +P+
Sbjct: 260 LDLNINQISEIPDSFA-TLKNLQKLDLGSNQIKKIPDSFGKLASLQQLNLGSNQIKKIPD 318

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
               L +L+ LN+S N   +E +P S   L++L +L +  N I  +PDS+  L  LQ+L 
Sbjct: 319 SFGKLASLQQLNLSHN--KIEEIPDSFATLVNLQQLYLYNNPIKEVPDSLATLVNLQQLG 376

Query: 182 LEGNPLVSPP 191
              N +   P
Sbjct: 377 FSSNQIKEIP 386



 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 112/190 (58%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP  LT  L+++  L ++   +K +P+S+  L  L+ L +  N ++ +P ++    +L+ 
Sbjct: 178 IPYVLTT-LVSLQQLHLNDTGIKEIPDSLAALVNLQQLYLYNNQIKEIPDSLAALSNLQR 236

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  NFN+++++PD++  +L +L+ L +N N+I  +P S   L +L+ LD   N +K +P+
Sbjct: 237 LQLNFNRIKKIPDSLA-KLASLQQLDLNINQISEIPDSFATLKNLQKLDLGSNQIKKIPD 295

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
               L +L+ LN+  N   ++ +P S G L SL +L++S+NKI  +PDS   L  LQ+L 
Sbjct: 296 SFGKLASLQQLNLGSN--QIKKIPDSFGKLASLQQLNLSHNKIEEIPDSFATLVNLQQLY 353

Query: 182 LEGNPLVSPP 191
           L  NP+   P
Sbjct: 354 LYNNPIKEVP 363



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 102/177 (57%), Gaps = 5/177 (2%)

Query: 17  DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTI 76
           +   N LK LP     L KLK L+   N LE++P  I     L++LN +FN+++++P+++
Sbjct: 52  EAQENNLKTLPPETTQLQKLKRLEWPCNNLEAIPVIITKFPKLKQLNLSFNQIKEIPESL 111

Query: 77  GFELINLKTLSINCN-KIVILPQSLTHLTSLRVLDARLN-CLKSLPEDLENLINLEVLNI 134
              LINL+ L ++ N +I  +P SL+ L +L+ LD   N  +K +P+ L  L+NL+ L +
Sbjct: 112 S-ALINLQQLDLSANHQIKEIPDSLSALINLQQLDLSANHQIKEIPDSLAALVNLQQLQL 170

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
             N   ++ +PY +  L+SL +L ++   I  +PDS+  L  LQ+L L  N +   P
Sbjct: 171 GGN--PIKEIPYVLTTLVSLQQLHLNDTGIKEIPDSLAALVNLQQLYLYNNQIKEIP 225



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 107/199 (53%), Gaps = 24/199 (12%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGN-LLESLPKTIENCRSLEELNANFN-KLRQLP 73
           L++  NQ+K +P S+  L  L+ LD+S N  ++ +P ++    +L++L+ + N +++++P
Sbjct: 97  LNLSFNQIKEIPESLSALINLQQLDLSANHQIKEIPDSLSALINLQQLDLSANHQIKEIP 156

Query: 74  DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL- 132
           D++   L+NL+ L +  N I  +P  LT L SL+ L      +K +P+ L  L+NL+ L 
Sbjct: 157 DSLA-ALVNLQQLQLGGNPIKEIPYVLTTLVSLQQLHLNDTGIKEIPDSLAALVNLQQLY 215

Query: 133 --------------------NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
                                +  NF  ++ +P S+  L SL +LD++ N+I+ +PDS  
Sbjct: 216 LYNNQIKEIPDSLAALSNLQRLQLNFNRIKKIPDSLAKLASLQQLDLNINQISEIPDSFA 275

Query: 173 CLRKLQKLSLEGNPLVSPP 191
            L+ LQKL L  N +   P
Sbjct: 276 TLKNLQKLDLGSNQIKKIP 294



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 88/161 (54%), Gaps = 10/161 (6%)

Query: 39  LDVSGNLLESLPKTIENCRSLEEL-------NANFNKLRQLPDTIGFELINLKTLSINCN 91
           LD+SG  L++LP  I     LE L        A  N L+ LP     +L  LK L   CN
Sbjct: 21  LDLSGMNLDALPPAIGKLAKLETLILGKWNGEAQENNLKTLPPETT-QLQKLKRLEWPCN 79

Query: 92  KIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLL 151
            +  +P  +T    L+ L+   N +K +PE L  LINL+ L++S N Q ++ +P S+  L
Sbjct: 80  NLEAIPVIITKFPKLKQLNLSFNQIKEIPESLSALINLQQLDLSANHQ-IKEIPDSLSAL 138

Query: 152 MSLVELDVSYN-KITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           ++L +LD+S N +I  +PDS+  L  LQ+L L GNP+   P
Sbjct: 139 INLQQLDLSANHQIKEIPDSLAALVNLQQLQLGGNPIKEIP 179



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 80/136 (58%), Gaps = 2/136 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+SL A L+N+  L   SNQ+K +P+S+  L  L+ LD+S N ++ +P ++     L+ 
Sbjct: 362 VPDSL-ATLVNLQQLGFSSNQIKEIPDSLATLVNLQQLDISSNQIKEIPDSLAALTHLQN 420

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  +  ++ ++PD +   L+NL+ L+++ N+I  +P S   L SL+ L    N +  +P 
Sbjct: 421 LGLSSTQITEIPDFLS-TLVNLQQLNLSFNQIKKIPDSFVKLASLQALYLCSNQITKIPS 479

Query: 122 DLENLINLEVLNISQN 137
            LENL  L+ L++  N
Sbjct: 480 FLENLPALQKLDLRLN 495



 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 46/78 (58%), Gaps = 1/78 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ L+  L+N+  L++  NQ+K +P+S   L+ L+ L +  N +  +P  +EN  +L++
Sbjct: 431 IPDFLST-LVNLQQLNLSFNQIKKIPDSFVKLASLQALYLCSNQITKIPSFLENLPALQK 489

Query: 62  LNANFNKLRQLPDTIGFE 79
           L+   N +   P+ +G E
Sbjct: 490 LDLRLNPIPVSPEILGSE 507


>gi|421088183|ref|ZP_15549011.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410003168|gb|EKO53614.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 305

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++ +NQ   LPN IG L  L+ L +  N L +LPK +   ++L+    N N
Sbjct: 64  GQLKNLQTLNLWNNQFTTLPNEIGQLQSLRELYLGDNQLTTLPKEVGQLKNLQVFELNNN 123

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +  N++  LP+ +  L +L  L    N L +LP++   L 
Sbjct: 124 QLTTLPAEIG-KLKNLQHLDLWNNQLTTLPKEVGQLKNLYDLSLHDNKLTTLPKETGQLK 182

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL +LN+S+N   L  LP  IG L  L+ L+++YN++TTLP  IG L+ L++L L  N L
Sbjct: 183 NLRMLNLSKNL--LTILPNEIGQLKKLLSLNLTYNQLTTLPKEIGQLQSLRELYLGDNQL 240

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 241 KTLPKEI 247



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 68/190 (35%), Positives = 113/190 (59%), Gaps = 3/190 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ V ++++NQL  LP  IG L  L+ LD+  N L +LPK +   ++L +L+ + N
Sbjct: 110 GQLKNLQVFELNNNQLTTLPAEIGKLKNLQHLDLWNNQLTTLPKEVGQLKNLYDLSLHDN 169

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  LP   G +L NL+ L+++ N + ILP  +  L  L  L+   N L +LP+++  L 
Sbjct: 170 KLTTLPKETG-QLKNLRMLNLSKNLLTILPNEIGQLKKLLSLNLTYNQLTTLPKEIGQLQ 228

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  L +  N   L+TLP  IG L +L EL + + ++TT+P  IG L+KL+ L L+ NP+
Sbjct: 229 SLRELYLGDN--QLKTLPKEIGQLKNLRELLLRHKQLTTVPKEIGQLKKLRWLLLDANPI 286

Query: 188 VSPPMDVVEQ 197
           +   +  +++
Sbjct: 287 LPKELKRIQK 296



 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 3/107 (2%)

Query: 7   TARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANF 66
           T +L N+ +L++  N L  LPN IG L KL  L+++ N L +LPK I   +SL EL    
Sbjct: 178 TGQLKNLRMLNLSKNLLTILPNEIGQLKKLLSLNLTYNQLTTLPKEIGQLQSLRELYLGD 237

Query: 67  NKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR--VLDA 111
           N+L+ LP  IG +L NL+ L +   ++  +P+ +  L  LR  +LDA
Sbjct: 238 NQLKTLPKEIG-QLKNLRELLLRHKQLTTVPKEIGQLKKLRWLLLDA 283



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVL+     L  LP+++  L NL+ LN+  N     TLP  IG L SL 
Sbjct: 36  LTKALKNPLDVRVLNLSKQKLTILPKEIGQLKNLQTLNLWNN--QFTTLPNEIGQLQSLR 93

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           EL +  N++TTLP  +G L+ LQ   L  N L + P ++
Sbjct: 94  ELYLGDNQLTTLPKEVGQLKNLQVFELNNNQLTTLPAEI 132


>gi|398341354|ref|ZP_10526057.1| leucine-rich repeat protein [Leptospira kirschneri serovar Bim str.
           1051]
          Length = 305

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 71/194 (36%), Positives = 114/194 (58%), Gaps = 4/194 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +  +L N+  L++ +NQ   LPN IG L  L+ L +  N L +LPK +   ++L+
Sbjct: 58  ILPKEI-GQLKNLQTLNLWNNQFTTLPNEIGQLQSLRELYLGDNQLTTLPKEVGQLKNLQ 116

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
               N N+L  LP  IG +L NL+ L +  N++  LP+ +  L +L  L    N L +LP
Sbjct: 117 VFELNNNQLTTLPAEIG-KLKNLQHLDLWNNQLTTLPKEVGQLKNLYDLSLHDNKLTTLP 175

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           ++   L NL +LN+S+N   L  LP  IG L  L+ L+++YN++TTLP  IG L+ L++L
Sbjct: 176 KETGQLKNLRMLNLSKNL--LTILPNEIGQLKKLLSLNLTYNQLTTLPKEIGQLQSLREL 233

Query: 181 SLEGNPLVSPPMDV 194
            L  N L + P ++
Sbjct: 234 YLGDNQLKTLPKEI 247



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 114/190 (60%), Gaps = 3/190 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ V ++++NQL  LP  IG L  L+ LD+  N L +LPK +   ++L +L+ + N
Sbjct: 110 GQLKNLQVFELNNNQLTTLPAEIGKLKNLQHLDLWNNQLTTLPKEVGQLKNLYDLSLHDN 169

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  LP   G +L NL+ L+++ N + ILP  +  L  L  L+   N L +LP+++  L 
Sbjct: 170 KLTTLPKETG-QLKNLRMLNLSKNLLTILPNEIGQLKKLLSLNLTYNQLTTLPKEIGQLQ 228

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  L +  N   L+TLP  IG L +L EL + +N++TT+P  IG L+KL+ L L+ NP+
Sbjct: 229 SLRELYLGDN--QLKTLPKEIGQLKNLRELLLRHNQLTTVPKEIGQLKKLRWLLLDANPI 286

Query: 188 VSPPMDVVEQ 197
           +   +  +++
Sbjct: 287 LPKELKRIQK 296



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/107 (40%), Positives = 64/107 (59%), Gaps = 3/107 (2%)

Query: 7   TARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANF 66
           T +L N+ +L++  N L  LPN IG L KL  L+++ N L +LPK I   +SL EL    
Sbjct: 178 TGQLKNLRMLNLSKNLLTILPNEIGQLKKLLSLNLTYNQLTTLPKEIGQLQSLRELYLGD 237

Query: 67  NKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR--VLDA 111
           N+L+ LP  IG +L NL+ L +  N++  +P+ +  L  LR  +LDA
Sbjct: 238 NQLKTLPKEIG-QLKNLRELLLRHNQLTTVPKEIGQLKKLRWLLLDA 283



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVL+     L  LP+++  L NL+ LN+  N     TLP  IG L SL 
Sbjct: 36  LTKALKNPLDVRVLNLSKQKLTILPKEIGQLKNLQTLNLWNN--QFTTLPNEIGQLQSLR 93

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           EL +  N++TTLP  +G L+ LQ   L  N L + P ++
Sbjct: 94  ELYLGDNQLTTLPKEVGQLKNLQVFELNNNQLTTLPAEI 132


>gi|443652792|ref|ZP_21130908.1| small GTP-binding domain protein [Microcystis aeruginosa
           DIANCHI905]
 gi|443334234|gb|ELS48757.1| small GTP-binding domain protein [Microcystis aeruginosa
           DIANCHI905]
          Length = 875

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 123/197 (62%), Gaps = 4/197 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE+L A+L ++  L + +NQ++ +P ++  L+ L+VL ++ N +  +P+ +    SL+ 
Sbjct: 54  IPEAL-AQLTSLQRLYLKNNQIREIPEALTHLTSLQVLYLNNNQISEIPEALAQLTSLQR 112

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N++R++P  +   L +L+ L ++ N+I  +P++L HLTSL +L    N +K +PE
Sbjct: 113 LDLSDNQIREIPKALA-HLTSLQELDLSDNQIREIPEALAHLTSLELLFLNNNQIKEIPE 171

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L +L +L+VL +S N   +  +P ++  L SL  L +  N+I  +P+++  L  L++L 
Sbjct: 172 ALAHLTSLQVLYLSNN--QIREIPEALAQLTSLQNLHLKNNQIREIPEALAHLVNLKRLV 229

Query: 182 LEGNPLVSPPMDVVEQG 198
           L+ NP+ + P +++ QG
Sbjct: 230 LQNNPITNVPPEIIRQG 246



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/153 (35%), Positives = 93/153 (60%), Gaps = 3/153 (1%)

Query: 39  LDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ 98
           LD+SG  L  +P  I +  SL+ELN + N++ ++P+ +  +L +L+ L +  N+I  +P+
Sbjct: 21  LDLSGRNLTEIPPEIPHLTSLQELNLSNNQISEIPEALA-QLTSLQRLYLKNNQIREIPE 79

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
           +LTHLTSL+VL    N +  +PE L  L +L+ L++S N   +  +P ++  L SL ELD
Sbjct: 80  ALTHLTSLQVLYLNNNQISEIPEALAQLTSLQRLDLSDN--QIREIPKALAHLTSLQELD 137

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           +S N+I  +P+++  L  L+ L L  N +   P
Sbjct: 138 LSDNQIREIPEALAHLTSLELLFLNNNQIKEIP 170


>gi|355748651|gb|EHH53134.1| hypothetical protein EGM_13704 [Macaca fascicularis]
          Length = 524

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 112/193 (58%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 120 LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 179 LDLGNNEIYNLPESIG-ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPE 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L  L ISQN   LET+P  IG L  L  L V  N++T LP+++G    L +L 
Sbjct: 238 EISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELV 295

Query: 182 LEGNPLVSPPMDV 194
           L  N L++ P  +
Sbjct: 296 LTENQLLTLPKSI 308



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 108/195 (55%), Gaps = 7/195 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   AR L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L
Sbjct: 27  VPEEIYRYARSLEELLLD--ANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N++ ++P++I F    L+    + N +  LP+S   L +L  L      L+SL
Sbjct: 85  VELDVSRNEIPEIPESISF-CKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++ NL NL  L + +N   L  LP S+  L  L ELD+  N+I  LP+SIG L  L+ 
Sbjct: 144 PENIGNLYNLASLELRENL--LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKD 201

Query: 180 LSLEGNPLVSPPMDV 194
           L L+GN L   P ++
Sbjct: 202 LWLDGNQLSELPQEI 216



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 121/250 (48%), Gaps = 32/250 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N++  +P SI     L+V D SGN L  LP++    ++L  L+ N  
Sbjct: 79  ANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDI 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD--------------ARL 113
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD              A L
Sbjct: 139 SLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALL 197

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L  LP+++ NL NL  L++S+N   LE LP  I  L SL +L +S N +
Sbjct: 198 HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN--RLERLPEEISGLTSLTDLVISQNLL 255

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVG 224
            T+PD IG L+KL  L ++ N L   P + V    S  +  L+E  N     PK    +G
Sbjct: 256 ETIPDGIGKLKKLSILKVDQNRLTQLP-EAVGDCESLTELVLTE--NQLLTLPKS---IG 309

Query: 225 KLVKYGTFNG 234
           KL K    N 
Sbjct: 310 KLKKLSNLNA 319



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 108/207 (52%), Gaps = 6/207 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+ A LL++  L +  NQL  LP  IG L  L  LDVS N LE LP+ I    SL +
Sbjct: 189 LPESIGA-LLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTD 247

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L  +PD IG +L  L  L ++ N++  LP+++    SL  L    N L +LP+
Sbjct: 248 LVISQNLLETIPDGIG-KLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPK 306

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L  L  LN  +N   L +LP  IG   SL    V  N++T +P  +    +L  L 
Sbjct: 307 SIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLD 364

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSE 208
           + GN L+  P+ +    L A+  +LS+
Sbjct: 365 VAGNRLLHLPLSLTALKLKAL--WLSD 389



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 96/176 (54%), Gaps = 4/176 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N++ LDV  N+L+ LP  I  L+ L  L +S NLLE++P  I   + L  L  + N+L
Sbjct: 219 LKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRL 278

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            QLP+ +G +  +L  L +  N+++ LP+S+  L  L  L+A  N L SLP+++    +L
Sbjct: 279 TQLPEAVG-DCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSL 337

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            V  +  N   L  +P  +     L  LDV+ N++  LP S+  L KL+ L L  N
Sbjct: 338 TVFCVRDN--RLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTAL-KLKALWLSDN 390



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 2/103 (1%)

Query: 89  NCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSI 148
           +C+ + +  +   +  SL  L    N L+ LPE    L+ L  L +S N   ++ LP  I
Sbjct: 21  HCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDN--EIQRLPPEI 78

Query: 149 GLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
              M LVELDVS N+I  +P+SI   + LQ     GNPL   P
Sbjct: 79  ANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLP 121


>gi|344274389|ref|XP_003408999.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Loxodonta africana]
          Length = 581

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 113/196 (57%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+   L  +  L ++SN+L+ LP  +GCL  L  L +S N L SLP +++N + L 
Sbjct: 113 ILPSSI-KELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLR 171

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKLR++P  + + L +L TL +  N+I  + + + +L+ L +L  R N +K LP
Sbjct: 172 MLDLRHNKLREIPSVV-YRLDSLTTLYLRFNRITTVEKDIKNLSKLIMLSIRENKIKQLP 230

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG  + +  LD+ +N++  LPD+IG L  L +L
Sbjct: 231 AEIGELCNLITLDVAHN--QLEHLPKEIGNCIQITNLDLQHNELLDLPDTIGNLSSLSRL 288

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N L + P  + +
Sbjct: 289 GLRYNRLSAIPRSLAK 304



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 104/187 (55%), Gaps = 12/187 (6%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +++L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  +  L+   N+L  L
Sbjct: 216 LIMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCIQITNLDLQHNELLDL 275

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEV 131
           PDTIG  L +L  L +  N++  +P+SL   ++L  L+   N + +LPE  L +L+ L  
Sbjct: 276 PDTIG-NLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPETLLSSLVKLNS 334

Query: 132 LNISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNP 186
           L +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N 
Sbjct: 335 LTLARNCFQL-----YPMGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQ 389

Query: 187 LVSPPMD 193
           L S P+D
Sbjct: 390 LTSLPLD 396



 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 2/160 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           ++V L++ +NQL  +P  +  L  L+VL +S NLL+ LP  + N R L EL+   NKL  
Sbjct: 402 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 461

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ I + L +L+ L +  N++  LP+ + HLT+L  L    N L  LPE++  L NLE 
Sbjct: 462 LPNEIAY-LKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEE 520

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           L ++ N   L +LP+ + L   L  + +    ++ LP  I
Sbjct: 521 LYLNDN-PNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 559



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 110/232 (47%), Gaps = 50/232 (21%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           + +  LD+  N+L  LP++IG LS L  L +  N L ++P+++  C +LEELN   N + 
Sbjct: 260 IQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNIS 319

Query: 71  QLPDTIGFELINLKTLSI--NC-------------------------------------- 90
            LP+T+   L+ L +L++  NC                                      
Sbjct: 320 TLPETLLSSLVKLNSLTLARNCFQLYPMGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKV 379

Query: 91  --------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
                   N++  LP      TS+  L+   N L  +PED+  L++LEVL +S N   L+
Sbjct: 380 LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LK 437

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LP+ +G L  L ELD+  NK+ +LP+ I  L+ LQKL L  N L + P  +
Sbjct: 438 KLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 489



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 8/177 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 356 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 413

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  L +L  LR LD   N L+SLP ++  L +L
Sbjct: 414 TKIPEDVSG-LVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 472

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           + L ++ N   L TLP  IG L +L  L +  N +T LP+ IG L  L++L L  NP
Sbjct: 473 QKLVLTNN--QLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNP 527



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 97/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +PE+L + L+ +  L +  N  +  P       S +  L++  N +  +P  I    + L
Sbjct: 321 LPETLLSSLVKLNSLTLARNCFQLYPMGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL 380

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP   G    ++  L++  N++  +P+ ++ L SL VL    N LK L
Sbjct: 381 SKLNMKDNQLTSLPLDFG-TWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 439

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  L NL  L  L++ +N   LE+LP  I  L  L +L ++ N++TTLP  IG L  L  
Sbjct: 440 PHGLGNLRKLRELDLEEN--KLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTH 497

Query: 180 LSLEGNPLVSPPMDV 194
           L L  N L   P ++
Sbjct: 498 LGLGENLLTHLPEEI 512



 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L ++   I ILP S+  LT L  L    N L+SLP ++  L+NL  L +S+N   L +LP
Sbjct: 104 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLP 161

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            S+  L  L  LD+ +NK+  +P  +  L  L  L L  N + +   D+
Sbjct: 162 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 210


>gi|418686305|ref|ZP_13247474.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410739259|gb|EKQ83988.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 258

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 107/184 (58%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           ++V  LD+  NQL  LP  I  L +L+ LD+S N L +LPK I   + L  L  + N+L 
Sbjct: 37  MDVRTLDLSKNQLTTLPKEIEKLKELESLDLSNNQLVTLPKEIGKLQKLRYLYLDHNQLT 96

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  I + L +L++L +  N++  LP+ + +L  L+VLD   N L ++P+++  L  L+
Sbjct: 97  TLPKEIEY-LKDLESLDLRNNQLTTLPKEIEYLKKLQVLDLNDNQLTTIPKEIGYLKKLQ 155

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +  N   L TLP  IG L  L  LD+  N++TTLP  IG L+KL+KL L+ N   + 
Sbjct: 156 ELYLINN--QLTTLPKEIGYLEELWLLDLRKNQLTTLPKEIGKLQKLEKLYLKNNQFTTF 213

Query: 191 PMDV 194
           P ++
Sbjct: 214 PKEI 217



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 105/193 (54%), Gaps = 3/193 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+ +NQL  LP  IG L KL+ L +  N L +LPK IE  + LE L+   N+L  LP  
Sbjct: 65  LDLSNNQLVTLPKEIGKLQKLRYLYLDHNQLTTLPKEIEYLKDLESLDLRNNQLTTLPKE 124

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           I + L  L+ L +N N++  +P+ + +L  L+ L    N L +LP+++  L  L +L++ 
Sbjct: 125 IEY-LKKLQVLDLNDNQLTTIPKEIGYLKKLQELYLINNQLTTLPKEIGYLEELWLLDLR 183

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
           +N   L TLP  IG L  L +L +  N+ TT P  IG L+KL  L+L+  P +      +
Sbjct: 184 KN--QLTTLPKEIGKLQKLEKLYLKNNQFTTFPKEIGKLQKLNTLNLDDIPALKSQEKKI 241

Query: 196 EQGLSAVKGYLSE 208
           ++ L     Y  E
Sbjct: 242 QKLLPKASIYFIE 254


>gi|395502117|ref|XP_003755432.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Sarcophilus
           harrisii]
          Length = 582

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 112/196 (57%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+P S+   L  +  L ++SN+L+ LP  +GCL  L  L +S N L SLP +++N + L 
Sbjct: 114 MLPSSI-KELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLR 172

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKLR++P  + + L +L TL +  N+I  + + + +L+ L +L  R N +K LP
Sbjct: 173 MLDLRHNKLREIPSVV-YRLDSLTTLYLRFNRITTVEKDIKNLSKLIMLSIRENKIKQLP 231

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG    +  LD+ +N++  LP++IG L  L +L
Sbjct: 232 AEIGELCNLITLDVAHN--QLEHLPKEIGTCTQITNLDLQHNELLDLPETIGNLSSLNRL 289

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N L + P  + +
Sbjct: 290 GLRYNRLSAIPRSLAK 305



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 104/187 (55%), Gaps = 12/187 (6%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +++L +  N++K LP  IG L  L  LDV+ N LE LPK I  C  +  L+   N+L  L
Sbjct: 217 LIMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGTCTQITNLDLQHNELLDL 276

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEV 131
           P+TIG  L +L  L +  N++  +P+SL   ++L  L+   N + +LPE  L +L+NL  
Sbjct: 277 PETIG-NLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPEGLLSSLVNLNS 335

Query: 132 LNISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNP 186
           L +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N 
Sbjct: 336 LTLARNCFQS-----YPMGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQ 390

Query: 187 LVSPPMD 193
           L + P+D
Sbjct: 391 LTALPLD 397



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 87/159 (54%), Gaps = 2/159 (1%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +V L++ +NQ+  +   +  L  L+VL +S N+L+ LP  + N R L EL+   NKL  L
Sbjct: 404 MVELNLATNQITKISEDVSGLVSLEVLILSNNVLKRLPHGLGNLRKLRELDLEENKLESL 463

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P+ I + L +L+ L +  N++  LP+ + HLT+L  L    N L  LPE++  L NLE L
Sbjct: 464 PNEIAY-LKDLQKLVLTNNQLNNLPRGIGHLTNLTHLGLGENLLAHLPEEIGTLENLEEL 522

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
            ++ N   L  LP+ + L   L  + +    ++ LP  I
Sbjct: 523 YLNDN-PNLHGLPFELALCSKLSIMSIENCPLSHLPPQI 560



 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 107/230 (46%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N+L  LP +IG LS L  L +  N L ++P+++  C +LEELN   N +  L
Sbjct: 263 ITNLDLQHNELLDLPETIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTL 322

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+ +   L+NL +L++  NC                                        
Sbjct: 323 PEGLLSSLVNLNSLTLARNCFQSYPMGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLS 382

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N +  + ED+  L++LEVL +S N   L+ L
Sbjct: 383 KLNMKDNQLTALPLDYGTWTSMVELNLATNQITKISEDVSGLVSLEVLILSNNV--LKRL 440

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ +G L  L ELD+  NK+ +LP+ I  L+ LQKL L  N L + P  +
Sbjct: 441 PHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLNNLPRGI 490



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 94/177 (53%), Gaps = 8/177 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L +LP       S+ ELN   N++
Sbjct: 357 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTALPLDYGTWTSMVELNLATNQI 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++ + +   L++L+ L ++ N +  LP  L +L  LR LD   N L+SLP ++  L +L
Sbjct: 415 TKISEDVSG-LVSLEVLILSNNVLKRLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           + L ++ N   L  LP  IG L +L  L +  N +  LP+ IG L  L++L L  NP
Sbjct: 474 QKLVLTNN--QLNNLPRGIGHLTNLTHLGLGENLLAHLPEEIGTLENLEELYLNDNP 528



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 94/195 (48%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +PE L + L+N+  L +  N  +  P       S +  L++  N +  +P  I    + L
Sbjct: 322 LPEGLLSSLVNLNSLTLARNCFQSYPMGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL 381

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP   G    ++  L++  N+I  + + ++ L SL VL    N LK L
Sbjct: 382 SKLNMKDNQLTALPLDYG-TWTSMVELNLATNQITKISEDVSGLVSLEVLILSNNVLKRL 440

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  L NL  L  L++ +N   LE+LP  I  L  L +L ++ N++  LP  IG L  L  
Sbjct: 441 PHGLGNLRKLRELDLEEN--KLESLPNEIAYLKDLQKLVLTNNQLNNLPRGIGHLTNLTH 498

Query: 180 LSLEGNPLVSPPMDV 194
           L L  N L   P ++
Sbjct: 499 LGLGENLLAHLPEEI 513



 Score = 37.4 bits (85), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 28/51 (54%)

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           +  LP SI  L  L EL +  NK+ +LP  +GCL  L  L+L  N L S P
Sbjct: 112 IHMLPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLP 162


>gi|418735838|ref|ZP_13292243.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
 gi|410748566|gb|EKR01465.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
          Length = 306

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 71/181 (39%), Positives = 106/181 (58%), Gaps = 3/181 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+++NQL  LP  IG L  LK+L +  N L  LPK I   ++LE+L+ + N
Sbjct: 111 GQLKNLEYLDLNNNQLTTLPKEIGLLQNLKILHLYANQLTVLPKEIWQLKNLEDLDLSGN 170

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
               LP  IG +L NL  L +  +++  LP+ +  L  L+ L  R N L  LP+++E L 
Sbjct: 171 SFTILPKEIG-QLKNLGELILEHSQLKTLPKEIGQLKDLQHLSLRNNQLTILPKEIEQLK 229

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L +S +   L  LP  IGLL +LV LD+  N++ TLP  +G L+ L+ L L+ NP+
Sbjct: 230 NL--LTLSSDNNQLTVLPKEIGLLQNLVTLDLRNNQLETLPKEVGQLKNLRWLFLDANPI 287

Query: 188 V 188
           +
Sbjct: 288 L 288



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 105/184 (57%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VLD+   +L  LP  I  L  L+ L +  N L +LPK I   ++L+ L+   N+L 
Sbjct: 45  LDVRVLDLREQKLTILPKEIWQLKNLRELRLDNNQLTTLPKEIGLLQNLKILHLYANQLT 104

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG +L NL+ L +N N++  LP+ +  L +L++L    N L  LP+++  L NLE
Sbjct: 105 ILPKEIG-QLKNLEYLDLNNNQLTTLPKEIGLLQNLKILHLYANQLTVLPKEIWQLKNLE 163

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++S N      LP  IG L +L EL + ++++ TLP  IG L+ LQ LSL  N L   
Sbjct: 164 DLDLSGN--SFTILPKEIGQLKNLGELILEHSQLKTLPKEIGQLKDLQHLSLRNNQLTIL 221

Query: 191 PMDV 194
           P ++
Sbjct: 222 PKEI 225



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 100/186 (53%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L + +NQL  LP  IG L  LK+L +  N L  LPK I   ++LE L+ N N+
Sbjct: 66  QLKNLRELRLDNNQLTTLPKEIGLLQNLKILHLYANQLTILPKEIGQLKNLEYLDLNNNQ 125

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG  L NLK L +  N++ +LP+ +  L +L  LD   N    LP+++  L N
Sbjct: 126 LTTLPKEIGL-LQNLKILHLYANQLTVLPKEIWQLKNLEDLDLSGNSFTILPKEIGQLKN 184

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L  L +  +   L+TLP  IG L  L  L +  N++T LP  I  L+ L  LS + N L 
Sbjct: 185 LGELILEHS--QLKTLPKEIGQLKDLQHLSLRNNQLTILPKEIEQLKNLLTLSSDNNQLT 242

Query: 189 SPPMDV 194
             P ++
Sbjct: 243 VLPKEI 248



 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVLD R   L  LP+++  L NL  L +  N   L TLP  IGLL +L 
Sbjct: 37  LTKALQNPLDVRVLDLREQKLTILPKEIWQLKNLRELRLDNN--QLTTLPKEIGLLQNLK 94

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L +  N++T LP  IG L+ L+ L L  N L + P ++
Sbjct: 95  ILHLYANQLTILPKEIGQLKNLEYLDLNNNQLTTLPKEI 133


>gi|198451363|ref|XP_002137290.1| GA27118 [Drosophila pseudoobscura pseudoobscura]
 gi|261277894|sp|B5DX45.1|SUR8_DROPS RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|198131455|gb|EDY67848.1| GA27118 [Drosophila pseudoobscura pseudoobscura]
          Length = 629

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 113/191 (59%), Gaps = 4/191 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP S     +++  L ++SN++  LP  IGCL  L+ L ++ N L SLP++++NC+ L+
Sbjct: 162 VIP-STVKECVHLTELYLYSNKIGQLPAEIGCLVNLRNLALNENSLTSLPESLQNCKQLK 220

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKL ++P  I + L  L TL +  N+I  +  +L  L +L +L  R N ++ L 
Sbjct: 221 VLDLRHNKLAEIPPVI-YRLRTLTTLYLRFNRITAVADNLRQLVNLTMLSLRENKIRELG 279

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             +  L+NL  L++S N  +LE LP  IG  ++L  LD+ +N++  +PDSIG L+ L +L
Sbjct: 280 SAIGALVNLTTLDVSHN--HLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRL 337

Query: 181 SLEGNPLVSPP 191
            L  N L S P
Sbjct: 338 GLRYNRLSSVP 348



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 114/241 (47%), Gaps = 51/241 (21%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +    +N+  LD+  N+L  +P+SIG L  L  L +  N L S+P T++NC+S++E
Sbjct: 301 LPEDI-GNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGLRYNRLSSVPATLKNCKSMDE 359

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ------------SLTH------- 102
            N   N + QLPD +   L  L T++++ N+    P             +L H       
Sbjct: 360 FNVEGNGMTQLPDGMLASLSGLTTITLSRNQFTSYPTGGPAQFTNVYSINLEHNRIDKIP 419

Query: 103 ---------LTSLRV--------------------LDARLNCLKSLPEDLENLINLEVLN 133
                    LT L +                    L+   N L+ LP+D+ NL NLE+L 
Sbjct: 420 YGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILI 479

Query: 134 ISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMD 193
           +S N   L+ +P +IG +  L  LD+  N+I  LP  IG L +LQ+L L+ N +   P  
Sbjct: 480 LSNNM--LKKIPNTIGNMRKLRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPRS 537

Query: 194 V 194
           +
Sbjct: 538 I 538



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 97/161 (60%), Gaps = 2/161 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           +N+V L++ +N L+ LP+ I  L  L++L +S N+L+ +P TI N R L  L+   N++ 
Sbjct: 450 VNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNMRKLRILDLEENRIE 509

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG  L  L+ L +  N+I +LP+S+ HL++L  L    N L+ LPE++ +L  LE
Sbjct: 510 VLPHEIGL-LHELQRLILQTNQITMLPRSIGHLSNLTHLSVSENNLQFLPEEIGSLEGLE 568

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
            L I+QN   LE LP+ + L  +L  L++    ++T+P  I
Sbjct: 569 NLYINQN-PGLEKLPFELALCQNLKYLNIDKCPLSTIPPEI 608



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 94/179 (52%), Gaps = 26/179 (14%)

Query: 36  LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           +K LD+S + +  +P T++ C  L EL    NK+ QLP  IG  L+NL+ L++N N +  
Sbjct: 150 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPAEIGC-LVNLRNLALNENSLTS 208

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLP-----------------------EDLENLINLEVL 132
           LP+SL +   L+VLD R N L  +P                       ++L  L+NL +L
Sbjct: 209 LPESLQNCKQLKVLDLRHNKLAEIPPVIYRLRTLTTLYLRFNRITAVADNLRQLVNLTML 268

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           ++ +N   +  L  +IG L++L  LDVS+N +  LP+ IG    L  L L+ N L+  P
Sbjct: 269 SLREN--KIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIP 325



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 99/185 (53%), Gaps = 4/185 (2%)

Query: 3   PESLTARLLNVVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEE 61
           P    A+  NV  +++  N++  +P  I   +K L  L++  N+L +LP  I    ++ E
Sbjct: 395 PTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVE 454

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N L++LPD I   L NL+ L ++ N +  +P ++ ++  LR+LD   N ++ LP 
Sbjct: 455 LNLATNALQKLPDDI-MNLQNLEILILSNNMLKKIPNTIGNMRKLRILDLEENRIEVLPH 513

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L  L+ L +  N   +  LP SIG L +L  L VS N +  LP+ IG L  L+ L 
Sbjct: 514 EIGLLHELQRLILQTN--QITMLPRSIGHLSNLTHLSVSENNLQFLPEEIGSLEGLENLY 571

Query: 182 LEGNP 186
           +  NP
Sbjct: 572 INQNP 576



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 103/188 (54%), Gaps = 4/188 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L+N+ +L +  N+++ L ++IG L  L  LDVS N LE LP+ I NC +L  L+   N+
Sbjct: 261 QLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNE 320

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLI 127
           L  +PD+IG  L +L  L +  N++  +P +L +  S+   +   N +  LP+  L +L 
Sbjct: 321 LLDIPDSIG-NLKSLVRLGLRYNRLSSVPATLKNCKSMDEFNVEGNGMTQLPDGMLASLS 379

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNP 186
            L  + +S+N Q+            ++  +++ +N+I  +P  I    K L KL+++ N 
Sbjct: 380 GLTTITLSRN-QFTSYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENM 438

Query: 187 LVSPPMDV 194
           L + P+D+
Sbjct: 439 LTALPLDI 446



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 97/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +P+ + A L  +  + +  NQ    P       + +  +++  N ++ +P  I    + L
Sbjct: 370 LPDGMLASLSGLTTITLSRNQFTSYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGL 429

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N L  LP  IG   +N+  L++  N +  LP  + +L +L +L    N LK +
Sbjct: 430 TKLNMKENMLTALPLDIG-TWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKI 488

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  + N+  L +L++ +N   +E LP+ IGLL  L  L +  N+IT LP SIG L  L  
Sbjct: 489 PNTIGNMRKLRILDLEEN--RIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLSNLTH 546

Query: 180 LSLEGNPLVSPPMDV 194
           LS+  N L   P ++
Sbjct: 547 LSVSENNLQFLPEEI 561


>gi|455790671|gb|EMF42524.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 267

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 70/183 (38%), Positives = 101/183 (55%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L++  NQL  LP  IG L  L+VL+++GN   SLPK I   ++LE L+   N+L  
Sbjct: 18  NLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQLAS 77

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ L++  N+   LP+ +  L +L  LD   N   SLP+++  L  LE 
Sbjct: 78  LPKEIG-QLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEA 136

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LN+  N       P  I    SL  L +S +++ TLP  I  L+ LQ L L+GN L S P
Sbjct: 137 LNLDHN--RFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLTSLP 194

Query: 192 MDV 194
            ++
Sbjct: 195 KEI 197



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 103/178 (57%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQL  LP  IG L  L+VL+++GN   SLPK I   ++LE L+   N
Sbjct: 60  GQLQNLERLDLAGNQLASLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGN 119

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP  IG +L  L+ L+++ N+  I P+ +    SL+ L    + LK+LP+++  L 
Sbjct: 120 QFTSLPKEIG-QLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQ 178

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ L++  N   L +LP  IG L +L EL++  NK+ TLP  I  L+ LQ L L  N
Sbjct: 179 NLQSLHLDGN--QLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSN 234



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 98/175 (56%), Gaps = 3/175 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           ++L+ LP  IG    L+ L++ GN L SLPK I   ++L  LN   N+   LP  IG +L
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG-QL 62

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            NL+ L +  N++  LP+ +  L +LRVL+   N   SLP+++  L NLE L+++ N   
Sbjct: 63  QNLERLDLAGNQLASLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGN--Q 120

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
             +LP  IG L  L  L++ +N+ T  P  I   + L+ L L G+ L + P +++
Sbjct: 121 FTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEIL 175



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 2/82 (2%)

Query: 113 LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
           L+ L+SLP  +    NLE LN+  N   L +LP  IG L +L  L+++ N+ T+LP  IG
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGN--QLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60

Query: 173 CLRKLQKLSLEGNPLVSPPMDV 194
            L+ L++L L GN L S P ++
Sbjct: 61  QLQNLERLDLAGNQLASLPKEI 82


>gi|24215665|ref|NP_713146.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074857|ref|YP_005989175.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196830|gb|AAN50164.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458647|gb|AER03192.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 408

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 116/195 (59%), Gaps = 4/195 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +T +L N+  L +  N+L  LP  IG L  L++LD+  N L  LPK I   ++L 
Sbjct: 206 ILPKEIT-QLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLL 264

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+ + N+L  LP  I  +L NL+ L++  N+    P+ +T   +L+VLD   N L +LP
Sbjct: 265 VLDLSGNQLTILPKEIT-QLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLP 323

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++  L NL+ L++S+N   L TLP  IG L  L  L + +N++ TLP+ I  L+ L+KL
Sbjct: 324 KEIGQLQNLQKLHLSRN--QLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKL 381

Query: 181 SLEGNPLVSPPMDVV 195
            L  NPL+S  ++ +
Sbjct: 382 YLHNNPLLSEKIERI 396



 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 113/210 (53%), Gaps = 24/210 (11%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGN--LLESLPKTIENCRSLEELNAN 65
            RL N+  L +  N+L  LP  IG L  L+ L + G       LPK I   ++L+EL+  
Sbjct: 164 GRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLK 223

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
           FN+L  LP  IG +L NL+ L +  N++ ILP+ +  L +L VLD   N L  LP+++  
Sbjct: 224 FNRLTVLPKEIG-QLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 282

Query: 126 LINLEVLNIS--------------QNFQYLE-------TLPYSIGLLMSLVELDVSYNKI 164
           L NL+ LN+               QN Q L+       TLP  IG L +L +L +S N++
Sbjct: 283 LQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHLSRNQL 342

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           TTLP  IG L+KL+ L L+ N L + P ++
Sbjct: 343 TTLPKEIGRLQKLESLGLDHNQLATLPEEI 372



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 108/184 (58%), Gaps = 5/184 (2%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           V +LD+  ++LK LP  IG L  L++L+   N L +LPK I   ++L+EL+   N+L  L
Sbjct: 54  VRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTL 113

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P+ IG +L NLK L +N N++  LP+ +  L +L+ L+  +N L  LP+++  L NL+ L
Sbjct: 114 PEEIG-QLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQEL 172

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDV-SYNK-ITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            +S N   L  LP  IG L SL +L +   NK  T LP  I  L+ LQ+L L+ N L   
Sbjct: 173 YLSLN--RLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVL 230

Query: 191 PMDV 194
           P ++
Sbjct: 231 PKEI 234



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 107/187 (57%), Gaps = 1/187 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L+  +NQL  LP  IG L  L+ L +  N L +LP+ I   ++L+ L+ N N
Sbjct: 72  GQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNN 131

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+ L++  N++ ILP+ +  L +L+ L   LN L  LPE++  L 
Sbjct: 132 QLTTLPEEIG-KLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLE 190

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  L++    +    LP  I  L +L EL + +N++T LP  IG L+ L+ L L  N L
Sbjct: 191 SLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRL 250

Query: 188 VSPPMDV 194
              P ++
Sbjct: 251 TILPKEI 257


>gi|75907715|ref|YP_322011.1| small GTP-binding protein domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75701440|gb|ABA21116.1| Small GTP-binding protein domain protein [Anabaena variabilis ATCC
           29413]
          Length = 1107

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/192 (35%), Positives = 113/192 (58%), Gaps = 5/192 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE++ A L N++ LD+  NQ+  +P +I  L+ L  L +S N +  +P+ I N  +L +
Sbjct: 256 IPEAI-ANLTNLMQLDLSYNQITEIPKAIANLTNLTQLVLSDNKITEIPEAIANLTNLTQ 314

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + NK+ ++P+TI   L NL  L  N NKI  + +++  LT+L  L    N +  +PE
Sbjct: 315 LDLSDNKITEIPETIA-NLTNLTELYFNYNKITQIAEAIAKLTNLTELHLSSNQITQIPE 373

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + NL NL  L +  N+  +  +  +I  L +L EL +  N+IT +P+++  L KL+KL 
Sbjct: 374 AIANLTNLTELYL--NYNKITQIAEAIAKLTNLTELHLDGNQITQIPEALESLPKLEKLD 431

Query: 182 LEGNPL-VSPPM 192
           L GNPL +SP +
Sbjct: 432 LRGNPLPISPEI 443



 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 110/190 (57%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+++ A L N+  L + SNQ+  +P +I  L+ L  LD+S N +  +PK I N  +L +
Sbjct: 233 IPKAI-ANLTNLTHLILFSNQITEIPEAIANLTNLMQLDLSYNQITEIPKAIANLTNLTQ 291

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + NK+ ++P+ I   L NL  L ++ NKI  +P+++ +LT+L  L    N +  + E
Sbjct: 292 LVLSDNKITEIPEAIA-NLTNLTQLDLSDNKITEIPETIANLTNLTELYFNYNKITQIAE 350

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L NL  L++S N   +  +P +I  L +L EL ++YNKIT + ++I  L  L +L 
Sbjct: 351 AIAKLTNLTELHLSSN--QITQIPEAIANLTNLTELYLNYNKITQIAEAIAKLTNLTELH 408

Query: 182 LEGNPLVSPP 191
           L+GN +   P
Sbjct: 409 LDGNQITQIP 418



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/188 (34%), Positives = 106/188 (56%), Gaps = 4/188 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE++ A L N+  L + SNQ+  +P +I  L+ L  LD+  N +  +PK I N  +L +
Sbjct: 164 IPEAI-ANLTNLTHLILFSNQITEIPEAIANLTNLTQLDLGDNQITEIPKAIANLTNLTQ 222

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++ ++P  I   L NL  L +  N+I  +P+++ +LT+L  LD   N +  +P+
Sbjct: 223 LDLGDNQITEIPKAIA-NLTNLTHLILFSNQITEIPEAIANLTNLMQLDLSYNQITEIPK 281

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + NL NL  L +S N   +  +P +I  L +L +LD+S NKIT +P++I  L  L +L 
Sbjct: 282 AIANLTNLTQLVLSDN--KITEIPEAIANLTNLTQLDLSDNKITEIPETIANLTNLTELY 339

Query: 182 LEGNPLVS 189
              N +  
Sbjct: 340 FNYNKITQ 347



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 107/190 (56%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE++ A L N+  L + SNQ+   P +I  L+ L  LD+S N +  +P+ I N  +L  
Sbjct: 118 IPEAI-ANLTNLTHLILFSNQITETPEAIAKLTNLTQLDLSDNQITEIPEAIANLTNLTH 176

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N++ ++P+ I   L NL  L +  N+I  +P+++ +LT+L  LD   N +  +P+
Sbjct: 177 LILFSNQITEIPEAIA-NLTNLTQLDLGDNQITEIPKAIANLTNLTQLDLGDNQITEIPK 235

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + NL NL  L +  N   +  +P +I  L +L++LD+SYN+IT +P +I  L  L +L 
Sbjct: 236 AIANLTNLTHLILFSN--QITEIPEAIANLTNLMQLDLSYNQITEIPKAIANLTNLTQLV 293

Query: 182 LEGNPLVSPP 191
           L  N +   P
Sbjct: 294 LSDNKITEIP 303



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 107/193 (55%), Gaps = 4/193 (2%)

Query: 3   PESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEEL 62
           PE++ A+L N+  LD+  NQ+  +P +I  L+ L  L +  N +  +P+ I N  +L +L
Sbjct: 142 PEAI-AKLTNLTQLDLSDNQITEIPEAIANLTNLTHLILFSNQITEIPEAIANLTNLTQL 200

Query: 63  NANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED 122
           +   N++ ++P  I   L NL  L +  N+I  +P+++ +LT+L  L    N +  +PE 
Sbjct: 201 DLGDNQITEIPKAIA-NLTNLTQLDLGDNQITEIPKAIANLTNLTHLILFSNQITEIPEA 259

Query: 123 LENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           + NL NL  L++S N   +  +P +I  L +L +L +S NKIT +P++I  L  L +L L
Sbjct: 260 IANLTNLMQLDLSYN--QITEIPKAIANLTNLTQLVLSDNKITEIPEAIANLTNLTQLDL 317

Query: 183 EGNPLVSPPMDVV 195
             N +   P  + 
Sbjct: 318 SDNKITEIPETIA 330



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 92/178 (51%), Gaps = 3/178 (1%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           V  N LK LP  +  L  L+ LD+SGN LE +P  +     LEEL     ++ ++P+ I 
Sbjct: 64  VSGNNLKTLPLELLGLPNLRKLDISGNPLERIPDLVTQILHLEELILIRVEITEIPEAIA 123

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
             L NL  L +  N+I   P+++  LT+L  LD   N +  +PE + NL NL  L +  N
Sbjct: 124 -NLTNLTHLILFSNQITETPEAIAKLTNLTQLDLSDNQITEIPEAIANLTNLTHLILFSN 182

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
              +  +P +I  L +L +LD+  N+IT +P +I  L  L +L L  N +   P  + 
Sbjct: 183 --QITEIPEAIANLTNLTQLDLGDNQITEIPKAIANLTNLTQLDLGDNQITEIPKAIA 238



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 80/172 (46%), Gaps = 23/172 (13%)

Query: 39  LDVSGNLLESLPKTIENCRSLEEL------------------NANFNKLRQLP-DTIGFE 79
           LD+SG  L  LP  I   + LE L                    + N L+ LP + +G  
Sbjct: 21  LDLSGQELTELPGEIGKLQQLESLILGKQVGGYEWVGDRYLKKVSGNNLKTLPLELLG-- 78

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+ L I+ N +  +P  +T +  L  L      +  +PE + NL NL  L +  N Q
Sbjct: 79  LPNLRKLDISGNPLERIPDLVTQILHLEELILIRVEITEIPEAIANLTNLTHLILFSN-Q 137

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
             ET P +I  L +L +LD+S N+IT +P++I  L  L  L L  N +   P
Sbjct: 138 ITET-PEAIAKLTNLTQLDLSDNQITEIPEAIANLTNLTHLILFSNQITEIP 188


>gi|421136056|ref|ZP_15596167.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019790|gb|EKO86604.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
          Length = 424

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 75/197 (38%), Positives = 111/197 (56%), Gaps = 3/197 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L +  NQ    P  IG L  LKVL ++ N +  LP  I   + L+ L  + N+
Sbjct: 229 QLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQ 288

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  I  +L NLK+L ++ N++ ILP+ +  L +L+ LD R N LK+LP+++E L N
Sbjct: 289 LITLPKEIE-QLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKN 347

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S N   L TLP  IG L +L+ L + YN++TTLP+ I  L+ LQ L L  N   
Sbjct: 348 LQTLFLSNN--QLTTLPQEIGQLQNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFS 405

Query: 189 SPPMDVVEQGLSAVKGY 205
           S     + + L   + Y
Sbjct: 406 SQEKKRIRKLLPKCQIY 422



 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 111/194 (57%), Gaps = 4/194 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +  +L N+ +L +HSN+L  L   I  L  LK LD+S N L +LP  IE  ++L+
Sbjct: 176 VLPQEI-EQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLK 234

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L  + N+    P  IG +L NLK L +N N+I ILP  +  L  L+ L    N L +LP
Sbjct: 235 SLYLSENQFATFPKEIG-QLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLP 293

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++E L NL+ L++S N   L  LP  +G L +L  LD+  N++ TLP  I  L+ LQ L
Sbjct: 294 KEIEQLKNLKSLDLSYN--QLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTL 351

Query: 181 SLEGNPLVSPPMDV 194
            L  N L + P ++
Sbjct: 352 FLSNNQLTTLPQEI 365



 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 107/186 (57%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ VLD+ SNQL  LP  I  L  L++L +  N L +L K IE  ++L+ L+ + N+
Sbjct: 160 QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQ 219

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP+ I  +L NLK+L ++ N+    P+ +  L +L+VL    N +  LP ++  L  
Sbjct: 220 LTTLPNEIE-QLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKK 278

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S N   L TLP  I  L +L  LD+SYN++T LP  +G L  LQ L L  N L 
Sbjct: 279 LQYLYLSDN--QLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLK 336

Query: 189 SPPMDV 194
           + P ++
Sbjct: 337 TLPKEI 342



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/196 (36%), Positives = 113/196 (57%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +  +L N+ +L + SN+L  LPN I  L  L+VLD+  N L  LP+ IE  ++L+
Sbjct: 84  VLPQEI-EQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQ 142

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L    N+L  LP+ I  +L NL+ L +  N++ +LPQ +  L +L++L    N L +L 
Sbjct: 143 LLYLRSNRLTTLPNEIE-QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLS 201

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +D+E L NL+ L++S N   L TLP  I  L +L  L +S N+  T P  IG L+ L+ L
Sbjct: 202 KDIEQLQNLKSLDLSNN--QLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVL 259

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N +   P ++ +
Sbjct: 260 FLNNNQITILPNEIAK 275



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 111/198 (56%), Gaps = 4/198 (2%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V VLD+   +LK LP  IG L  L+ L +  N L  LP+ IE  ++L+ L    N+L 
Sbjct: 47  LEVRVLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLT 106

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ I  +L NL+ L +  N++ +LPQ +  L +L++L  R N L +LP ++E L NL+
Sbjct: 107 TLPNEIE-QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQ 165

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
           VL++  N   L  LP  I  L +L  L +  N++TTL   I  L+ L+ L L  N L + 
Sbjct: 166 VLDLGSN--QLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTL 223

Query: 191 PMDVVEQGLSAVKGYLSE 208
           P + +EQ  +    YLSE
Sbjct: 224 PNE-IEQLKNLKSLYLSE 240



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 105/187 (56%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +H NQL  LP  I  L  L++L +  N L +LP  IE  ++L+ L+   N
Sbjct: 67  GQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSN 126

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L +  N++  LP  +  L +L+VLD   N L  LP+++E L 
Sbjct: 127 QLTVLPQEIE-QLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLK 185

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L +  N   L TL   I  L +L  LD+S N++TTLP+ I  L+ L+ L L  N  
Sbjct: 186 NLQLLYLHSN--RLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQF 243

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 244 ATFPKEI 250



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 85/146 (58%), Gaps = 3/146 (2%)

Query: 49  LPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRV 108
           L K ++N   +  L+ +  +L+ LP  IG +L NL+ L ++ N++ +LPQ +  L +L++
Sbjct: 39  LTKALQNPLEVRVLDLSRQELKTLPIEIG-QLKNLQRLYLHYNQLTVLPQEIEQLKNLQL 97

Query: 109 LDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           L  R N L +LP ++E L NL+VL++  N   L  LP  I  L +L  L +  N++TTLP
Sbjct: 98  LYLRSNRLTTLPNEIEQLKNLQVLDLGSN--QLTVLPQEIEQLKNLQLLYLRSNRLTTLP 155

Query: 169 DSIGCLRKLQKLSLEGNPLVSPPMDV 194
           + I  L+ LQ L L  N L   P ++
Sbjct: 156 NEIEQLKNLQVLDLGSNQLTVLPQEI 181



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/130 (37%), Positives = 73/130 (56%), Gaps = 1/130 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A+L  +  L +  NQL  LP  I  L  LK LD+S N L  LPK +    +L+ L+   N
Sbjct: 274 AKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNN 333

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  I  +L NL+TL ++ N++  LPQ +  L +L  L    N L +LP ++E L 
Sbjct: 334 QLKTLPKEIE-QLKNLQTLFLSNNQLTTLPQEIGQLQNLLWLSLVYNQLTTLPNEIEQLK 392

Query: 128 NLEVLNISQN 137
           NL+ L ++ N
Sbjct: 393 NLQTLYLNNN 402


>gi|390940126|ref|YP_006403863.1| hypothetical protein Sulba_0989 [Sulfurospirillum barnesii SES-3]
 gi|390193233|gb|AFL68288.1| leucine-rich repeat (LRR) protein [Sulfurospirillum barnesii SES-3]
          Length = 331

 Score =  103 bits (258), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 76/190 (40%), Positives = 109/190 (57%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P +LT +L  +  LD+   +L  LP SIG L  L VL ++GN L+ LPK+I    +L  
Sbjct: 21  LPRNLT-QLEAITTLDLSRKKLTFLPESIGALQNLSVLKITGNRLKVLPKSISLLTNLRN 79

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
                N L  LP+  G  L +L  L++N N++  LP S   LT+L  L   +N L  L  
Sbjct: 80  FQCENNLLEHLPEDFG-NLHSLVILNLNGNQLTALPSSFYDLTNLTRLTLAVNRLSHLDI 138

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
             +NL  L  L++S +  Y ETLP S G + SL  LD+S+NK+TTLP S+  +++L+ L 
Sbjct: 139 AFKNLKKL--LHVSLDTNYFETLPDSFGSMKSLYFLDLSFNKLTTLPSSLSEIKELETLI 196

Query: 182 LEGNPLVSPP 191
           LEGN L + P
Sbjct: 197 LEGNALQNLP 206



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 107/257 (41%), Gaps = 68/257 (26%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PES+ A L N+ VL +  N+LK LP SI  L+ L+      NLLE LP+   N  SL 
Sbjct: 43  FLPESIGA-LQNLSVLKITGNRLKVLPKSISLLTNLRNFQCENNLLEHLPEDFGNLHSLV 101

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIV-----------------------ILP 97
            LN N N+L  LP +  ++L NL  L++  N++                         LP
Sbjct: 102 ILNLNGNQLTALPSSF-YDLTNLTRLTLAVNRLSHLDIAFKNLKKLLHVSLDTNYFETLP 160

Query: 98  QSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL----NISQNFQYLE----------- 142
            S   + SL  LD   N L +LP  L  +  LE L    N  QN   LE           
Sbjct: 161 DSFGSMKSLYFLDLSFNKLTTLPSSLSEIKELETLILEGNALQNLPSLESHDMLIKLNLA 220

Query: 143 ----------------------------TLPYSIGLLMSLVELDVSYNKITTLPDSIGCL 174
                                       TLP S+  L  L  L++S N +T LP+ IG L
Sbjct: 221 SNQLHSIDCNLSKLEDLHILCLENNLLQTLPQSLCTLKKLTSLNLSANHLTHLPECIGQL 280

Query: 175 RKLQKLSLEGNPLVSPP 191
            +L +L +E N L S P
Sbjct: 281 TQLYELDVEDNALTSLP 297



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 24/125 (19%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           ++ L++ SNQL  +  ++  L  L +L +  NLL++LP+++   + L  LN + N L  L
Sbjct: 214 LIKLNLASNQLHSIDCNLSKLEDLHILCLENNLLQTLPQSLCTLKKLTSLNLSANHLTHL 273

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P+ IG                         LT L  LD   N L SLP  LENL  L+ L
Sbjct: 274 PECIG------------------------QLTQLYELDVEDNALTSLPNSLENLPLLKNL 309

Query: 133 NISQN 137
            I+ N
Sbjct: 310 YIANN 314



 Score = 38.1 bits (87), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 31/53 (58%)

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            TLP ++  L ++  LD+S  K+T LP+SIG L+ L  L + GN L   P  +
Sbjct: 19  HTLPRNLTQLEAITTLDLSRKKLTFLPESIGALQNLSVLKITGNRLKVLPKSI 71


>gi|427738149|ref|YP_007057693.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
           7116]
 gi|427373190|gb|AFY57146.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
           7116]
          Length = 989

 Score =  103 bits (258), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 108/188 (57%), Gaps = 3/188 (1%)

Query: 7   TARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANF 66
             +L N+  LD+  NQL  LP  I  LS L+ LD+  N L SLP  I    +L+ L+ +F
Sbjct: 164 VVQLSNLQNLDLRYNQLSSLPAEIAQLSNLQNLDLWHNKLSSLPAEIAQLSNLQNLDLSF 223

Query: 67  NKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENL 126
           NKL  LP  I  +L NL+ L +  N++  LP  +  L++L+ L+   N L SL  ++  L
Sbjct: 224 NKLSSLPAEI-VQLSNLQNLDLRYNQLSNLPVEIVQLSNLQSLNLTSNQLNSLLIEIFQL 282

Query: 127 INLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
            +L+ LN+S N   L +LP  IG L SL  L++SYNK+++LP  IG L  LQ L+L  N 
Sbjct: 283 TSLQSLNLSHN--KLSSLPVEIGQLNSLQSLNLSYNKLSSLPAEIGQLTCLQSLNLRNNQ 340

Query: 187 LVSPPMDV 194
           L   P ++
Sbjct: 341 LNRLPTEI 348



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 105/183 (57%), Gaps = 4/183 (2%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           ++D   N+L  LP  IG L++L+ L +  N L++LP  I    +L+ L+   N+L  LP 
Sbjct: 56  IIDTIGNKLSELPKEIGWLAQLEELQIIRNQLDNLPAEIVQLTNLQSLHLEENQLSSLPA 115

Query: 75  TIGFELINLKTLSINCN-KIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLN 133
            I   L NL++L ++ N K++ LP  +  L++L+ L  R N L SLP ++  L NL+ L+
Sbjct: 116 EIA-RLSNLQSLDLSYNNKLIGLPAEIVQLSNLQSLRLRGNKLSSLPTEVVQLSNLQNLD 174

Query: 134 ISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMD 193
           +  N   L +LP  I  L +L  LD+ +NK+++LP  I  L  LQ L L  N L S P +
Sbjct: 175 LRYN--QLSSLPAEIAQLSNLQNLDLWHNKLSSLPAEIAQLSNLQNLDLSFNKLSSLPAE 232

Query: 194 VVE 196
           +V+
Sbjct: 233 IVQ 235



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/188 (38%), Positives = 108/188 (57%), Gaps = 4/188 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A+L N+  LD+  N+L  LP  I  LS L+ LD+S N L SLP  I    +L+ L+  +N
Sbjct: 188 AQLSNLQNLDLWHNKLSSLPAEIAQLSNLQNLDLSFNKLSSLPAEIVQLSNLQNLDLRYN 247

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL++L++  N++  L   +  LTSL+ L+   N L SLP ++  L 
Sbjct: 248 QLSNLPVEI-VQLSNLQSLNLTSNQLNSLLIEIFQLTSLQSLNLSHNKLSSLPVEIGQLN 306

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLR-KLQKLSLEGNP 186
           +L+ LN+S N   L +LP  IG L  L  L++  N++  LP  IG L   L+ L+L+ NP
Sbjct: 307 SLQSLNLSYN--KLSSLPAEIGQLTCLQSLNLRNNQLNRLPTEIGHLHLHLKVLTLDNNP 364

Query: 187 LVSPPMDV 194
           L   P ++
Sbjct: 365 LKFLPAEI 372



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 103/190 (54%), Gaps = 4/190 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVS-GNLLESLPKTIENCRSLEELNANF 66
            +L N+  L +  NQL  LP  I  LS L+ LD+S  N L  LP  I    +L+ L    
Sbjct: 95  VQLTNLQSLHLEENQLSSLPAEIARLSNLQSLDLSYNNKLIGLPAEIVQLSNLQSLRLRG 154

Query: 67  NKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENL 126
           NKL  LP  +  +L NL+ L +  N++  LP  +  L++L+ LD   N L SLP ++  L
Sbjct: 155 NKLSSLPTEV-VQLSNLQNLDLRYNQLSSLPAEIAQLSNLQNLDLWHNKLSSLPAEIAQL 213

Query: 127 INLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
            NL+ L++S  F  L +LP  I  L +L  LD+ YN+++ LP  I  L  LQ L+L  N 
Sbjct: 214 SNLQNLDLS--FNKLSSLPAEIVQLSNLQNLDLRYNQLSNLPVEIVQLSNLQSLNLTSNQ 271

Query: 187 LVSPPMDVVE 196
           L S  +++ +
Sbjct: 272 LNSLLIEIFQ 281



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 81/161 (50%), Gaps = 18/161 (11%)

Query: 39  LDVSGNLLESLPKTIENCRSLEELNANFNKLRQ--LPDTIGFELINLKTLSINCNKIVIL 96
           LD+SG  L +LP  I     L++L    +K  Q  + DTIG             NK+  L
Sbjct: 21  LDLSGKGLTTLPPEIGKLTQLKKLILGKHKYDQGYIIDTIG-------------NKLSEL 67

Query: 97  PQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVE 156
           P+ +  L  L  L    N L +LP ++  L NL+ L++ +N   L +LP  I  L +L  
Sbjct: 68  PKEIGWLAQLEELQIIRNQLDNLPAEIVQLTNLQSLHLEEN--QLSSLPAEIARLSNLQS 125

Query: 157 LDVSY-NKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           LD+SY NK+  LP  I  L  LQ L L GN L S P +VV+
Sbjct: 126 LDLSYNNKLIGLPAEIVQLSNLQSLRLRGNKLSSLPTEVVQ 166



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 59/102 (57%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L ++  L++  N+L  LP  IG L+ L+ L++S N L SLP  I     L+ LN   N+
Sbjct: 281 QLTSLQSLNLSHNKLSSLPVEIGQLNSLQSLNLSYNKLSSLPAEIGQLTCLQSLNLRNNQ 340

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD 110
           L +LP  IG   ++LK L+++ N +  LP  + +  S R+L+
Sbjct: 341 LNRLPTEIGHLHLHLKVLTLDNNPLKFLPAEIRNRHSQRILN 382


>gi|421127514|ref|ZP_15587738.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410435604|gb|EKP84736.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 470

 Score =  103 bits (258), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 111/198 (56%), Gaps = 3/198 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  NQ    P  IG L  LKVL ++ N +  LP  I   + L+ L  + N
Sbjct: 274 EQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDN 333

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NLK+L ++ N++ ILP+ +  L +L+ LD R N LK+LP+++E L 
Sbjct: 334 QLITLPKEIE-QLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLK 392

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +S N   L TLP  IG L +L+ L + YN++TTLP+ I  L+ LQ L L  N  
Sbjct: 393 NLQTLFLSNN--QLTTLPQEIGQLQNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQF 450

Query: 188 VSPPMDVVEQGLSAVKGY 205
            S     + + L   + Y
Sbjct: 451 SSQEKKRIRKLLPKCQIY 468



 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 111/194 (57%), Gaps = 4/194 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +  +L N+ +L +HSN+L  L   I  L  LK LD+S N L +LP  IE  ++L+
Sbjct: 222 VLPQEI-EQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLK 280

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L  + N+    P  IG +L NLK L +N N+I ILP  +  L  L+ L    N L +LP
Sbjct: 281 SLYLSENQFATFPKEIG-QLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLP 339

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++E L NL+ L++S N   L  LP  +G L +L  LD+  N++ TLP  I  L+ LQ L
Sbjct: 340 KEIEQLKNLKSLDLSYN--QLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTL 397

Query: 181 SLEGNPLVSPPMDV 194
            L  N L + P ++
Sbjct: 398 FLSNNQLTTLPQEI 411



 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/208 (37%), Positives = 120/208 (57%), Gaps = 5/208 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +  +L N+ +L + SN+L  LPN I  L  L+VLD+  N L  LP+ IE  ++L+
Sbjct: 84  VLPQEI-EQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQ 142

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L    N+L  LP+ I  +L NL+ L +  N++ +LPQ +  L +L++L  R N L +LP
Sbjct: 143 LLYLRSNRLTTLPNEIE-QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLP 201

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++E L NL+VL++  N   L  LP  I  L +L  L +  N++TTL   I  L+ L+ L
Sbjct: 202 NEIEQLKNLQVLDLGSN--QLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSL 259

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSE 208
            L  N L + P + +EQ  +    YLSE
Sbjct: 260 DLSNNQLTTLPNE-IEQLKNLKSLYLSE 286



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/184 (38%), Positives = 105/184 (57%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V VLD+   +LK LP  IG L  L+ L +  N L  LP+ IE  ++L+ L    N+L 
Sbjct: 47  LEVRVLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLT 106

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ I  +L NL+ L +  N++ +LPQ +  L +L++L  R N L +LP ++E L NL+
Sbjct: 107 TLPNEIE-QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQ 165

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
           VL++  N   L  LP  I  L +L  L +  N++TTLP+ I  L+ LQ L L  N L   
Sbjct: 166 VLDLGSN--QLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVL 223

Query: 191 PMDV 194
           P ++
Sbjct: 224 PQEI 227



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 103/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +H NQL  LP  I  L  L++L +  N L +LP  IE  ++L+ L+   N
Sbjct: 67  GQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSN 126

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L +  N++  LP  +  L +L+VLD   N L  LP+++E L 
Sbjct: 127 QLTVLPQEIE-QLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLK 185

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L +  N   L TLP  I  L +L  LD+  N++T LP  I  L+ LQ L L  N L
Sbjct: 186 NLQLLYLRSN--RLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRL 243

Query: 188 VSPPMDV 194
            +   D+
Sbjct: 244 TTLSKDI 250



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 85/146 (58%), Gaps = 3/146 (2%)

Query: 49  LPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRV 108
           L K ++N   +  L+ +  +L+ LP  IG +L NL+ L ++ N++ +LPQ +  L +L++
Sbjct: 39  LTKALQNPLEVRVLDLSRQELKTLPIEIG-QLKNLQRLYLHYNQLTVLPQEIEQLKNLQL 97

Query: 109 LDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           L  R N L +LP ++E L NL+VL++  N   L  LP  I  L +L  L +  N++TTLP
Sbjct: 98  LYLRSNRLTTLPNEIEQLKNLQVLDLGSN--QLTVLPQEIEQLKNLQLLYLRSNRLTTLP 155

Query: 169 DSIGCLRKLQKLSLEGNPLVSPPMDV 194
           + I  L+ LQ L L  N L   P ++
Sbjct: 156 NEIEQLKNLQVLDLGSNQLTVLPQEI 181


>gi|418702924|ref|ZP_13263816.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410767468|gb|EKR38143.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 358

 Score =  103 bits (258), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 108/184 (58%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL +   +LK LP  IG L  L++LD+S N L  LPK I   ++L+EL  N+N+ +
Sbjct: 27  LDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQFK 86

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
             P  I  +L +L  L ++ N++ ILP  +  L +L+ L+   N LK++ +++E L NL+
Sbjct: 87  TFPKEIE-QLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQ 145

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +  N   L   P  IG L +L EL +S N++TT P  IG L+ LQ+L L  N L + 
Sbjct: 146 KLYLDNN--QLTAFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTF 203

Query: 191 PMDV 194
           P ++
Sbjct: 204 PKEI 207



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 106/186 (56%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L + +NQL   P  IG L  L+ L +S N L + PK I   ++L+EL  + N+
Sbjct: 140 QLKNLQKLYLDNNQLTAFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQNLQELYLSNNQ 199

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L   P  IG +L  L+ L +  N++  +P  +  L  L+ L+  +N L ++P+++  L N
Sbjct: 200 LTTFPKEIG-KLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQN 258

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+VL +S N    +T+P   G L +L  L +  N++T LP  IG L+ L+ L+L+ N L+
Sbjct: 259 LQVLFLSYN--QFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLI 316

Query: 189 SPPMDV 194
           + P ++
Sbjct: 317 TIPKEI 322



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 103/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++ +NQLK +   I  L  L+ L +  N L + PK I   ++L+EL  + N
Sbjct: 116 GQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLQELYLSNN 175

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L   P  IG +L NL+ L ++ N++   P+ +  L  L+ L    N L ++P ++  L 
Sbjct: 176 QLTTFPKEIG-KLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQ 234

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ LN+  N   L T+P  IG L +L  L +SYN+  T+P   G L+ L+ LSL+ N L
Sbjct: 235 KLQELNLDVN--QLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQL 292

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 293 TALPKEI 299



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 99/178 (55%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + +NQL   P  IG L  L+ L +S N L + PK I   + L+ L    N
Sbjct: 162 GKLQNLQELYLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDN 221

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P+ IG +L  L+ L+++ N++  +P+ +  L +L+VL    N  K++P +   L 
Sbjct: 222 QLTTIPNEIG-KLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLK 280

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL++L++  N   L  LP  IG L +L  L++  N++ T+P  IG L+ LQ L L  N
Sbjct: 281 NLKMLSLDAN--QLTALPKEIGKLKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNN 336



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 88/158 (55%), Gaps = 3/158 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + +NQL   P  IG L KL+ L +  N L ++P  I   + L+ELN + N
Sbjct: 185 GKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVN 244

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  IG +L NL+ L ++ N+   +P     L +L++L    N L +LP+++  L 
Sbjct: 245 QLTTIPKEIG-QLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLK 303

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
           NL++LN+  N   L T+P  IG L +L  L +  N+ +
Sbjct: 304 NLKMLNLDAN--QLITIPKEIGQLQNLQTLYLRNNQFS 339



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 2/94 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L N+ VL +  NQ K +P   G L  LK+L +  N L +LPK I   ++L+ 
Sbjct: 249 IPKEI-GQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKM 307

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           LN + N+L  +P  IG +L NL+TL +  N+  I
Sbjct: 308 LNLDANQLITIPKEIG-QLQNLQTLYLRNNQFSI 340


>gi|410294462|gb|JAA25831.1| leucine rich repeat containing 1 [Pan troglodytes]
          Length = 524

 Score =  103 bits (258), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 112/193 (58%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 120 LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 179 LDLGNNEIYNLPESIG-ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPE 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L  L ISQN   LET+P  IG L  L  L V  N++T LP+++G    L +L 
Sbjct: 238 EISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELV 295

Query: 182 LEGNPLVSPPMDV 194
           L  N L++ P  +
Sbjct: 296 LTENQLLTLPKSI 308



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 108/195 (55%), Gaps = 7/195 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   AR L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L
Sbjct: 27  VPEEIYRYARSLEELLLD--ANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N++ ++P++I F    L+    + N +  LP+S   L +L  L      L+SL
Sbjct: 85  VELDVSRNEIPEIPESISF-CKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++ NL NL  L + +N   L  LP S+  L  L ELD+  N+I  LP+SIG L  L+ 
Sbjct: 144 PENIGNLYNLASLELRENL--LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKD 201

Query: 180 LSLEGNPLVSPPMDV 194
           L L+GN L   P ++
Sbjct: 202 LWLDGNQLSELPQEI 216



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 121/250 (48%), Gaps = 32/250 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N++  +P SI     L+V D SGN L  LP++    ++L  L+ N  
Sbjct: 79  ANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDI 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD--------------ARL 113
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD              A L
Sbjct: 139 SLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALL 197

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L  LP+++ NL NL  L++S+N   LE LP  I  L SL +L +S N +
Sbjct: 198 HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN--RLERLPEEISGLTSLTDLVISQNLL 255

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVG 224
            T+PD IG L+KL  L ++ N L   P + V    S  +  L+E  N     PK    +G
Sbjct: 256 ETIPDGIGKLKKLSILKVDQNRLTQLP-EAVGDCESLTELVLTE--NQLLTLPKS---IG 309

Query: 225 KLVKYGTFNG 234
           KL K    N 
Sbjct: 310 KLKKLSNLNA 319



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 108/207 (52%), Gaps = 6/207 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+ A LL++  L +  NQL  LP  IG L  L  LDVS N LE LP+ I    SL +
Sbjct: 189 LPESIGA-LLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTD 247

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L  +PD IG +L  L  L ++ N++  LP+++    SL  L    N L +LP+
Sbjct: 248 LVISQNLLETIPDGIG-KLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPK 306

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L  L  LN  +N   L +LP  IG   SL    V  N++T +P  +    +L  L 
Sbjct: 307 SIGKLKKLSNLNADRN--KLVSLPKEIGGGCSLTVFCVRDNRLTRIPAEVSQATELHVLD 364

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSE 208
           + GN L+  P+ +    L A+  +LS+
Sbjct: 365 VAGNRLLHLPLSLTALKLKAL--WLSD 389



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 96/176 (54%), Gaps = 4/176 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N++ LDV  N+L+ LP  I  L+ L  L +S NLLE++P  I   + L  L  + N+L
Sbjct: 219 LKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRL 278

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            QLP+ +G +  +L  L +  N+++ LP+S+  L  L  L+A  N L SLP+++    +L
Sbjct: 279 TQLPEAVG-DCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGGCSL 337

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            V  +  N   L  +P  +     L  LDV+ N++  LP S+  L KL+ L L  N
Sbjct: 338 TVFCVRDN--RLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTAL-KLKALWLSDN 390



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 2/138 (1%)

Query: 57  RSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
           R +E ++     L  +P+ I     +L+ L ++ N++  LP+    L  LR L    N +
Sbjct: 12  RHVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + LP ++ N + L  L++S+N   +  +P SI    +L   D S N +T LP+S   L+ 
Sbjct: 72  QRLPPEIANFMQLVELDVSRN--EIPEIPESISFCKALQVADFSGNPLTRLPESFPELQN 129

Query: 177 LQKLSLEGNPLVSPPMDV 194
           L  LS+    L S P ++
Sbjct: 130 LTCLSVNDISLQSLPENI 147


>gi|455669294|gb|EMF34440.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 221

 Score =  103 bits (258), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 104/174 (59%), Gaps = 3/174 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L++  NQL  LP  IG L  L+VL+++GN L SLPK I   ++LE L+   N+   
Sbjct: 18  NLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTS 77

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L  L+ L+++ N+  I P+ +    SL+ L    + LK+LP+++  L NL+ 
Sbjct: 78  LPKEIG-QLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQS 136

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L++  N   L +LP  IG L +L EL++  NK+ TLP  IG L+KL+ L L  N
Sbjct: 137 LHLDGN--QLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIGQLQKLEVLRLYSN 188



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 103/186 (55%), Gaps = 4/186 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           ++L+ LP  IG    L+ L++ GN L SLPK I   ++L  LN   N+L  LP  IG +L
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIG-QL 62

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            NL+ L +  N+   LP+ +  L  L  L+   N     P+++    +L+ L +S +   
Sbjct: 63  QNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGD--Q 120

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+TLP  I LL +L  L +  N++T+LP  IG L+ L +L+L+ N L + P ++ + Q L
Sbjct: 121 LKTLPKEILLLQNLQSLHLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIGQLQKL 180

Query: 200 SAVKGY 205
             ++ Y
Sbjct: 181 EVLRLY 186



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 55/91 (60%), Gaps = 3/91 (3%)

Query: 113 LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
           L+ L+SLP  +    NLE LN+  N   L +LP  IG L +L  L+++ N++T+LP  IG
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGN--QLTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIG 60

Query: 173 CLRKLQKLSLEGNPLVSPPMDVVE-QGLSAV 202
            L+ L++L L GN   S P ++ + Q L A+
Sbjct: 61  QLQNLERLDLAGNQFTSLPKEIGQLQKLEAL 91


>gi|255080388|ref|XP_002503774.1| predicted protein [Micromonas sp. RCC299]
 gi|226519041|gb|ACO65032.1| predicted protein [Micromonas sp. RCC299]
          Length = 683

 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 108/189 (57%), Gaps = 3/189 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A+L ++  L  +++QL  +P  IG L+ L+  D+  N L S+P  I    +L EL  + N
Sbjct: 480 AQLTSLRELGFYNSQLTSVPAEIGQLTSLEKWDLGKNELASVPAEIGQLTALRELRLDGN 539

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L +LK L + CN++  LP  +  LTSL  L    N L S+P ++  L 
Sbjct: 540 RLTSLPAEIG-QLASLKKLLLGCNQLTSLPADIGQLTSLWELRLDGNRLTSVPAEIGQLT 598

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +LE L++S N   L ++P  IG L SL EL ++ N++T++P  I  L  L++L L GN L
Sbjct: 599 SLEKLDLSDN--QLTSVPTEIGQLTSLTELYLNGNQLTSVPTEIAQLSLLEQLWLSGNRL 656

Query: 188 VSPPMDVVE 196
            S P  + E
Sbjct: 657 KSVPAAIRE 665



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 103/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++V L +  NQL  LP  IG L+ L+ L +  N L S+P  I    SL ELN N N
Sbjct: 204 GQLTSMVKLSLTKNQLTSLPAEIGQLTSLRELALDNNRLTSVPAEIGQLTSLTELNLNGN 263

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  +  +L +L TL +  N++  +P  +  LTSLR L    N L S+P ++  L 
Sbjct: 264 QLTSVPAEV-VQLTSLDTLRLGGNQLTSVPADIGQLTSLRRLFLYGNQLTSVPAEIAQLT 322

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  L    +   L ++P  IG L SL + D+  N++ ++P  IG L  L++L L+GN L
Sbjct: 323 SLRELGFYNS--QLTSVPAEIGQLTSLEKWDLGKNELASVPAEIGQLTALRELRLDGNRL 380

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 381 TSLPAEI 387



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 106/187 (56%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A+L ++  L  +++QL  +P  IG L+ L+  D+  N L S+P  I    +L EL  + N
Sbjct: 319 AQLTSLRELGFYNSQLTSVPAEIGQLTSLEKWDLGKNELASVPAEIGQLTALRELRLDGN 378

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L +LK L + CN++  LP  +  LTSL  L    N L S+P ++  L 
Sbjct: 379 RLTSLPAEIG-QLASLKKLLLGCNQLTSLPADIGQLTSLWELRLDGNRLTSVPAEIGQLT 437

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +LE L++S N   L ++P  IG L SL EL ++ N++T++P  I  L  L++L    + L
Sbjct: 438 SLEKLDLSDN--QLTSVPTEIGQLTSLTELYLNGNQLTSVPAEIAQLTSLRELGFYNSQL 495

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 496 TSVPAEI 502



 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 103/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++  LD+  NQL  +P  IG L+ L  L ++GN L S+P  I    SL EL    +
Sbjct: 434 GQLTSLEKLDLSDNQLTSVPTEIGQLTSLTELYLNGNQLTSVPAEIAQLTSLRELGFYNS 493

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  IG +L +L+   +  N++  +P  +  LT+LR L    N L SLP ++  L 
Sbjct: 494 QLTSVPAEIG-QLTSLEKWDLGKNELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQLA 552

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L +  N   L +LP  IG L SL EL +  N++T++P  IG L  L+KL L  N L
Sbjct: 553 SLKKLLLGCN--QLTSLPADIGQLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSDNQL 610

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 611 TSVPTEI 617



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 103/189 (54%), Gaps = 3/189 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++  L ++ NQL  +P  I  L+ L+ L    + L S+P  I    SLE+ +   N
Sbjct: 457 GQLTSLTELYLNGNQLTSVPAEIAQLTSLRELGFYNSQLTSVPAEIGQLTSLEKWDLGKN 516

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  IG +L  L+ L ++ N++  LP  +  L SL+ L    N L SLP D+  L 
Sbjct: 517 ELASVPAEIG-QLTALRELRLDGNRLTSLPAEIGQLASLKKLLLGCNQLTSLPADIGQLT 575

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  L +  N   L ++P  IG L SL +LD+S N++T++P  IG L  L +L L GN L
Sbjct: 576 SLWELRLDGN--RLTSVPAEIGQLTSLEKLDLSDNQLTSVPTEIGQLTSLTELYLNGNQL 633

Query: 188 VSPPMDVVE 196
            S P ++ +
Sbjct: 634 TSVPTEIAQ 642



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 3/179 (1%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           ++ NQL  +P  I  L+ L+ L    + L S+P  I    SLE+ +   N+L  +P  IG
Sbjct: 306 LYGNQLTSVPAEIAQLTSLRELGFYNSQLTSVPAEIGQLTSLEKWDLGKNELASVPAEIG 365

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
            +L  L+ L ++ N++  LP  +  L SL+ L    N L SLP D+  L +L  L +  N
Sbjct: 366 -QLTALRELRLDGNRLTSLPAEIGQLASLKKLLLGCNQLTSLPADIGQLTSLWELRLDGN 424

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
              L ++P  IG L SL +LD+S N++T++P  IG L  L +L L GN L S P ++ +
Sbjct: 425 --RLTSVPAEIGQLTSLEKLDLSDNQLTSVPTEIGQLTSLTELYLNGNQLTSVPAEIAQ 481



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 101/187 (54%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++  L +  N+L  +P  IG L+ L+ LD+S N L S+P  I    SL EL  N N
Sbjct: 411 GQLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTSVPTEIGQLTSLTELYLNGN 470

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  I  +L +L+ L    +++  +P  +  LTSL   D   N L S+P ++  L 
Sbjct: 471 QLTSVPAEIA-QLTSLRELGFYNSQLTSVPAEIGQLTSLEKWDLGKNELASVPAEIGQLT 529

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L  L +  N   L +LP  IG L SL +L +  N++T+LP  IG L  L +L L+GN L
Sbjct: 530 ALRELRLDGN--RLTSLPAEIGQLASLKKLLLGCNQLTSLPADIGQLTSLWELRLDGNRL 587

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 588 TSVPAEI 594



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 99/192 (51%), Gaps = 4/192 (2%)

Query: 4   ESLTARLLNVVVLDVHSNQLK-CLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEEL 62
           E +T     VV L++    L   +P  IG L+ +  L ++ N L SLP  I    SL EL
Sbjct: 176 EGVTMENSRVVKLELEDFDLTGAVPAEIGQLTSMVKLSLTKNQLTSLPAEIGQLTSLREL 235

Query: 63  NANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED 122
             + N+L  +P  IG +L +L  L++N N++  +P  +  LTSL  L    N L S+P D
Sbjct: 236 ALDNNRLTSVPAEIG-QLTSLTELNLNGNQLTSVPAEVVQLTSLDTLRLGGNQLTSVPAD 294

Query: 123 LENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           +  L +L  L +  N   L ++P  I  L SL EL    +++T++P  IG L  L+K  L
Sbjct: 295 IGQLTSLRRLFLYGN--QLTSVPAEIAQLTSLRELGFYNSQLTSVPAEIGQLTSLEKWDL 352

Query: 183 EGNPLVSPPMDV 194
             N L S P ++
Sbjct: 353 GKNELASVPAEI 364


>gi|255082906|ref|XP_002504439.1| predicted protein [Micromonas sp. RCC299]
 gi|226519707|gb|ACO65697.1| predicted protein [Micromonas sp. RCC299]
          Length = 522

 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 70/197 (35%), Positives = 113/197 (57%), Gaps = 5/197 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL  +  LD++ NQL  +P  IG L+ L    + GN L S+P  I    SL+ L+ + N
Sbjct: 204 GRLTALRELDLNGNQLTSVPVEIGQLTSLVKFGLGGNELTSVPAEIGQLTSLQWLDLSDN 263

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  IG +L +L+ L +N N++  +P  +  LTSL+VL  R N L S+P ++  L 
Sbjct: 264 RLASVPADIG-QLTSLEGLGLNGNQLTSVPAEIWQLTSLKVLGLRGNQLTSVPAEIGQLT 322

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  LN++ N   L ++P  I  L SL  L +  N++T++P  IG L  L +L+L  N L
Sbjct: 323 SLSELNLNNN--QLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEIGRLTSLSELNLNNNQL 380

Query: 188 VSPPMDVVEQGLSAVKG 204
            S P ++ +  L++++G
Sbjct: 381 TSVPAEIWQ--LTSLRG 395



 Score =  101 bits (251), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 70/197 (35%), Positives = 111/197 (56%), Gaps = 5/197 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++V   +  N+L  +P  IG L+ L+ LD+S N L S+P  I    SLE L  N N
Sbjct: 227 GQLTSLVKFGLGGNELTSVPAEIGQLTSLQWLDLSDNRLASVPADIGQLTSLEGLGLNGN 286

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  I ++L +LK L +  N++  +P  +  LTSL  L+   N L S+P ++  L 
Sbjct: 287 QLTSVPAEI-WQLTSLKVLGLRGNQLTSVPAEIGQLTSLSELNLNNNQLTSVPAEIWQLT 345

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  L +  N   L ++P  IG L SL EL+++ N++T++P  I  L  L+ L L GN L
Sbjct: 346 SLRGLFLGGN--RLTSVPAEIGRLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRL 403

Query: 188 VSPPMDVVEQGLSAVKG 204
            S P ++    L+++KG
Sbjct: 404 TSVPAEIGR--LTSLKG 418



 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 105/187 (56%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++  L ++ NQL  +P  I  L+ LKVL + GN L S+P  I    SL ELN N N
Sbjct: 273 GQLTSLEGLGLNGNQLTSVPAEIWQLTSLKVLGLRGNQLTSVPAEIGQLTSLSELNLNNN 332

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  I ++L +L+ L +  N++  +P  +  LTSL  L+   N L S+P ++  L 
Sbjct: 333 QLTSVPAEI-WQLTSLRGLFLGGNRLTSVPAEIGRLTSLSELNLNNNQLTSVPAEIWQLT 391

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  L +  N   L ++P  IG L SL  L +  N++T++P  IG L  L +LSL+ N L
Sbjct: 392 SLRGLFLGGN--RLTSVPAEIGRLTSLKGLALYGNQLTSVPAEIGQLTALTELSLQRNKL 449

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 450 KSVPAEI 456



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/170 (35%), Positives = 97/170 (57%), Gaps = 3/170 (1%)

Query: 25  CLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLK 84
            +P  +G L+ L+ LD++GN L S+P  I    SL +     N+L  +P  IG +L +L+
Sbjct: 198 AVPAEVGRLTALRELDLNGNQLTSVPVEIGQLTSLVKFGLGGNELTSVPAEIG-QLTSLQ 256

Query: 85  TLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
            L ++ N++  +P  +  LTSL  L    N L S+P ++  L +L+VL +  N   L ++
Sbjct: 257 WLDLSDNRLASVPADIGQLTSLEGLGLNGNQLTSVPAEIWQLTSLKVLGLRGN--QLTSV 314

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P  IG L SL EL+++ N++T++P  I  L  L+ L L GN L S P ++
Sbjct: 315 PAEIGQLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEI 364



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 26/168 (15%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL ++  L++++NQL  +P  I  L+ L+ L + GN L S+P  I    SL+ L    N
Sbjct: 365 GRLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEIGRLTSLKGLALYGN 424

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  IG +L  L  LS+  NK                       LKS+P ++  L 
Sbjct: 425 QLTSVPAEIG-QLTALTELSLQRNK-----------------------LKSVPAEIGQLA 460

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLR 175
            L+ L ++ N   L ++P  IG L +L  L++  N++T++P +I  LR
Sbjct: 461 TLKELWLNDNL--LTSVPAEIGQLRALTSLNLDRNRLTSVPAAIRELR 506


>gi|432111692|gb|ELK34766.1| Leucine-rich repeat-containing protein 1, partial [Myotis davidii]
          Length = 510

 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 76/193 (39%), Positives = 112/193 (58%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 2   LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 60

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 61  LDLGNNEIYNLPESIGA-LVHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPE 119

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L  L ISQN   LET+P  IG L  L  L V  N++T LP++IG    L +L 
Sbjct: 120 EISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLTQLPETIGDCESLTELV 177

Query: 182 LEGNPLVSPPMDV 194
           L  N L++ P  +
Sbjct: 178 LTENRLLTLPKSI 190



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 107/199 (53%), Gaps = 11/199 (5%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N++ LDV  N+L+ LP  I  L+ L  L +S NLLE++P  I   + L  L  + N+L
Sbjct: 101 LKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRL 160

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            QLP+TIG +  +L  L +  N+++ LP+S+  L  L  L+A  N L SLP++++ ++ L
Sbjct: 161 TQLPETIG-DCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEVKIVMTL 219

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
              ++S    YL      IG   SL    V  N++T LP  +    +L  L + GN L  
Sbjct: 220 NAPHLS----YLR----QIGGCCSLTVFCVRDNRLTRLPAEVSQAAELHVLDVAGNRLSH 271

Query: 190 PPMDVVEQGLSAVKGYLSE 208
            P+ +    L A+  +LS+
Sbjct: 272 LPLSLTALKLKAL--WLSD 288


>gi|417783613|ref|ZP_12431331.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409953237|gb|EKO07738.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 595

 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 108/184 (58%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++   +L  LP  IG L  L+ L++  NLL +LPK I    +L+EL+   N+L 
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
             P  I  EL  L++L ++ N+++ILP  +  L +L+ L    N L + P+++  L NL+
Sbjct: 108 TFPAVI-VELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +S+N   L  LP  IG L +L  LD+  N+ TTLP  IG L+ LQ L+L  N L + 
Sbjct: 167 KLWLSEN--RLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLATL 224

Query: 191 PMDV 194
           P+++
Sbjct: 225 PVEI 228



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/183 (37%), Positives = 101/183 (55%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L+++      LP  I  L  LK L +  N L+ +P  I   R+LE LN   N+L +
Sbjct: 377 NLRGLNLYDCGFSTLPKEISLLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELER 436

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ LS++ N + I P  +  L  L+ LD  +N   + P+++  L NL+ 
Sbjct: 437 LPKEIG-QLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQT 495

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LN+ +N   L  L   IG L +L ELD++ N+ T LP  IG L+KLQ L L  N L + P
Sbjct: 496 LNLQRN--QLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP 553

Query: 192 MDV 194
            ++
Sbjct: 554 TEI 556



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 105/187 (56%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQL   P  I  L KL+ LD+S N L  LP  I   ++L++L    N
Sbjct: 91  GQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKN 150

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL   P  IG +L NL+ L ++ N++  LP+ +  L +L+ LD + N   +LP+++  L 
Sbjct: 151 KLTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQ 209

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+S N   L TLP  IG L +L EL +  N++T  P  IG L+ LQ L    N L
Sbjct: 210 NLQTLNLSDN--QLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRL 267

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 268 TALPKEM 274



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 9/197 (4%)

Query: 4   ESLTA------RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCR 57
           E LTA      +L N+  L++  N L  LP  IG L  L+ LD+  N L + P  I   +
Sbjct: 58  EKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQ 117

Query: 58  SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK 117
            LE L+ + N+L  LP+ IG  L NL+ L +  NK+   P+ +  L +L+ L    N L 
Sbjct: 118 KLESLDLSENRLIILPNEIG-RLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLT 176

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
           +LP+++  L NL+ L++  N     TLP  IG L +L  L++S N++ TLP  IG L+ L
Sbjct: 177 ALPKEIGQLKNLQTLDLQDN--QFTTLPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNL 234

Query: 178 QKLSLEGNPLVSPPMDV 194
           Q+L L  N L   P ++
Sbjct: 235 QELYLRNNRLTVFPKEI 251



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 101/180 (56%), Gaps = 3/180 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  L ++ N+L   P  IG L  L+ L +S N L +LPK I   ++L+ L+   N
Sbjct: 137 GRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDN 196

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP  IG +L NL+TL+++ N++  LP  +  L +L+ L  R N L   P+++  L 
Sbjct: 197 QFTTLPKEIG-QLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQ 255

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L   +N   L  LP  +G L +L  L++  N++T  P  IG L+ LQ L L  NPL
Sbjct: 256 NLQMLCSPEN--RLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPL 313



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 97/173 (56%), Gaps = 8/173 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  N+L  LP  IG L  L+ LD+  N   +LPK I   ++L+ LN + N
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDN 219

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +  N++ + P+ +  L +L++L +  N L +LP+++  L 
Sbjct: 220 QLATLPVEIG-QLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQ 278

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           NL+ LN+  N   L   P  IG L +L +L++  N     P S+   +++QKL
Sbjct: 279 NLQTLNLVNN--RLTVFPKEIGQLQNLQDLELLMN-----PLSLKERKRIQKL 324



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 97/186 (52%), Gaps = 27/186 (14%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP  +  +L N+  L++ +N+L+ LP  IG L  L+ L +  N L+  P  IE  + L++
Sbjct: 414 IPSEI-GQLRNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQK 472

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+    P  IG +L NL+TL++  N+       LT+LT+                
Sbjct: 473 LDLSVNQFTTFPKEIG-KLENLQTLNLQRNQ-------LTNLTA---------------- 508

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L NL+ L+++ N      LP  IG L  L  LD+  N++TTLP  IG L+ LQ L 
Sbjct: 509 EIGQLQNLQELDLNDN--QFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLY 566

Query: 182 LEGNPL 187
           L+ N L
Sbjct: 567 LQNNQL 572



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 102/238 (42%), Gaps = 53/238 (22%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L    N+L  LP  +G L  L+ L++  N L   PK I   ++L++L    N
Sbjct: 252 GQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMN 311

Query: 68  KL---------RQLPDTI------------------------GFEL-INLKTLSINCNKI 93
            L         +  PD+                          FEL +  K  S +  K+
Sbjct: 312 PLSLKERKRIQKLFPDSSLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKV 371

Query: 94  VI-----------------LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQ 136
           ++                 LP+ ++ L +L+ L   LN LK +P ++  L NLE LN+  
Sbjct: 372 ILKFRNLRGLNLYDCGFSTLPKEISLLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEA 431

Query: 137 NFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           N   LE LP  IG L +L +L +  N +   P  I  L+KLQKL L  N   + P ++
Sbjct: 432 N--ELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEI 487



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L + L+N +++ VLN+S   + L  LP  IG L +L EL++ +N +TTLP  IG L  
Sbjct: 38  RDLTKALQNPLDVRVLNLS--GEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLEN 95

Query: 177 LQKLSLEGNPLVSPPMDVVE 196
           LQ+L L  N L + P  +VE
Sbjct: 96  LQELDLRDNQLATFPAVIVE 115


>gi|327266826|ref|XP_003218205.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein
           4-like [Anolis carolinensis]
          Length = 612

 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 122/227 (53%), Gaps = 7/227 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A+L N+++LD+  N L   P  I  +  L+VL +  N +  +P  +     L+ L    N
Sbjct: 341 AKLTNMMILDLSENLLDTFPREICTMENLEVLALDDNQITEVPPEVHRLSRLKCLGLTSN 400

Query: 68  KLRQLPDTIGFELINLKTLSINCNK---IVILPQSLTHLTSLRVLDARLNCLKSLPEDLE 124
           +    P+ I F L +L+ L +  +K   +  LP++++ L +L+ L    N L+ LP  + 
Sbjct: 401 RFAWFPEEI-FHLQSLEKLYMGQDKGTKLADLPENISQLQNLKELYLEKNDLEYLPTSIG 459

Query: 125 NLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEG 184
            L NLE+L+   NF  L  LP SI  L  L +L +  N++  LP+++  L KLQ LSLEG
Sbjct: 460 LLNNLEILDCHNNF--LIELPDSICRLQGLQKLLLHSNQLFQLPENLDSLEKLQVLSLEG 517

Query: 185 NPLVSPPMDVVEQGLSAVKGYLSE-KMNNDHKSPKKKSWVGKLVKYG 230
           NPL+ PP++V  +GL A+  YL + ++        +  W G +V+ G
Sbjct: 518 NPLMDPPVEVFSEGLPAIWQYLKDARLRRAWAVKVQACWRGIMVRKG 564



 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 15/200 (7%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE + + L  +    +  N L  +P+++   SKL +LD+S NLL  LP++++    ++E
Sbjct: 244 IPEEICS-LKRLAQFFIAYNSLTAVPDTLSKCSKLSILDLSNNLLHKLPRSLKELTEIKE 302

Query: 62  LNANFNKLRQLPDTI----GFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK 117
              + N L   P  I       ++ LK    NC   ++ P SL  LT++ +LD   N L 
Sbjct: 303 FGLSGNPLANFPRQIRRWRSLIVVYLK----NCTLQMVHP-SLAKLTNMMILDLSENLLD 357

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
           + P ++  + NLEVL +  N   +  +P  +  L  L  L ++ N+    P+ I  L+ L
Sbjct: 358 TFPREICTMENLEVLALDDN--QITEVPPEVHRLSRLKCLGLTSNRFAWFPEEIFHLQSL 415

Query: 178 QKLSL---EGNPLVSPPMDV 194
           +KL +   +G  L   P ++
Sbjct: 416 EKLYMGQDKGTKLADLPENI 435



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 109/206 (52%), Gaps = 8/206 (3%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLL--ESLPKTIENCRSL 59
           IPES+  +L NV VL ++ N +  L    G L  L+ LD+S N L  +SL   +   R+L
Sbjct: 104 IPESID-QLKNVKVLYLNKNNIGTLCKEFGELKCLQNLDLSNNPLSCDSL-NIVSKLRAL 161

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +L      L + P  I   L +LK L ++ N +  LP+ + ++T L  +  + N  ++ 
Sbjct: 162 CQLRLYDVNLDEFPVEICKHLHHLKLLGLSTNNLTCLPKEVVNMTKLTEIYLKSNKFENF 221

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P++L +L NLE++++ +N   L ++P  I  L  L +  ++YN +T +PD++    KL  
Sbjct: 222 PQELCHLYNLEIIDLEKN--ELNSIPEEICSLKRLAQFFIAYNSLTAVPDTLSKCSKLSI 279

Query: 180 LSLEGNPLVSPPMDVVEQGLSAVKGY 205
           L L  N L   P  + E  L+ +K +
Sbjct: 280 LDLSNNLLHKLPRSLKE--LTEIKEF 303


>gi|355561805|gb|EHH18437.1| hypothetical protein EGK_15027, partial [Macaca mulatta]
          Length = 514

 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 112/193 (58%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 110 LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 168

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 169 LDLGNNEIYNLPESIG-ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPE 227

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L  L ISQN   LET+P  IG L  L  L V  N++T LP+++G    L +L 
Sbjct: 228 EISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELV 285

Query: 182 LEGNPLVSPPMDV 194
           L  N L++ P  +
Sbjct: 286 LTENQLLTLPKSI 298



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 108/195 (55%), Gaps = 7/195 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   AR L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L
Sbjct: 17  VPEEIYRYARSLEELLLD--ANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQL 74

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N++ ++P++I F    L+    + N +  LP+S   L +L  L      L+SL
Sbjct: 75  VELDVSRNEIPEIPESISF-CKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 133

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++ NL NL  L + +N   L  LP S+  L  L ELD+  N+I  LP+SIG L  L+ 
Sbjct: 134 PENIGNLYNLASLELRENL--LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKD 191

Query: 180 LSLEGNPLVSPPMDV 194
           L L+GN L   P ++
Sbjct: 192 LWLDGNQLSELPQEI 206



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 121/250 (48%), Gaps = 32/250 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N++  +P SI     L+V D SGN L  LP++    ++L  L+ N  
Sbjct: 69  ANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDI 128

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD--------------ARL 113
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD              A L
Sbjct: 129 SLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALL 187

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L  LP+++ NL NL  L++S+N   LE LP  I  L SL +L +S N +
Sbjct: 188 HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN--RLERLPEEISGLTSLTDLVISQNLL 245

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVG 224
            T+PD IG L+KL  L ++ N L   P + V    S  +  L+E  N     PK    +G
Sbjct: 246 ETIPDGIGKLKKLSILKVDQNRLTQLP-EAVGDCESLTELVLTE--NQLLTLPKS---IG 299

Query: 225 KLVKYGTFNG 234
           KL K    N 
Sbjct: 300 KLKKLSNLNA 309



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 104/201 (51%), Gaps = 4/201 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+ A LL++  L +  NQL  LP  IG L  L  LDVS N LE LP+ I    SL +
Sbjct: 179 LPESIGA-LLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTD 237

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L  +PD IG +L  L  L ++ N++  LP+++    SL  L    N L +LP+
Sbjct: 238 LVISQNLLETIPDGIG-KLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPK 296

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L  L  LN  +N   L +LP  IG   SL    V  N++T +P  +    +L  L 
Sbjct: 297 SIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLD 354

Query: 182 LEGNPLVSPPMDVVEQGLSAV 202
           + GN L+  P+ +    L A+
Sbjct: 355 VAGNRLLHLPLSLTALKLKAL 375



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 96/176 (54%), Gaps = 4/176 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N++ LDV  N+L+ LP  I  L+ L  L +S NLLE++P  I   + L  L  + N+L
Sbjct: 209 LKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRL 268

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            QLP+ +G +  +L  L +  N+++ LP+S+  L  L  L+A  N L SLP+++    +L
Sbjct: 269 TQLPEAVG-DCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSL 327

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            V  +  N   L  +P  +     L  LDV+ N++  LP S+  L KL+ L L  N
Sbjct: 328 TVFCVRDN--RLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTAL-KLKALWLSDN 380


>gi|344264787|ref|XP_003404471.1| PREDICTED: leucine-rich repeat-containing protein 1 [Loxodonta
           africana]
          Length = 524

 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 76/193 (39%), Positives = 111/193 (57%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 120 LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L SL  LD   N L+ LPE
Sbjct: 179 LDLGNNEIYSLPESIG-ALVHLKDLWLDGNQLSELPQEIGNLKSLLCLDVSENRLERLPE 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L  L ISQN   LET+P  IG L  L  L V  N++T LP++ G    L +L 
Sbjct: 238 EISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLTQLPEATGDCESLTELV 295

Query: 182 LEGNPLVSPPMDV 194
           L  N L++ P  +
Sbjct: 296 LTENRLLTLPKSI 308



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 108/195 (55%), Gaps = 7/195 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   AR L  ++LD  +NQL+ LP     L +L+ L +S N ++ LP  I N   L
Sbjct: 27  VPEEIYRYARSLEELLLD--ANQLRELPEQFFQLVRLRKLGLSDNEIQRLPPEIANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP+S   L +L  L      L+SL
Sbjct: 85  VELDVSRNDIPEIPESISF-CKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++ NL NL  L + +N   L  LP S+  L  L ELD+  N+I +LP+SIG L  L+ 
Sbjct: 144 PENIGNLYNLASLELRENL--LTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALVHLKD 201

Query: 180 LSLEGNPLVSPPMDV 194
           L L+GN L   P ++
Sbjct: 202 LWLDGNQLSELPQEI 216



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 98/184 (53%), Gaps = 3/184 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP++    ++L  L+ N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDI 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD   N + SLPE +  L+
Sbjct: 139 SLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALV 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L +  N   L  LP  IG L SL+ LDVS N++  LP+ I  L  L  L +  N L
Sbjct: 198 HLKDLWLDGN--QLSELPQEIGNLKSLLCLDVSENRLERLPEEISGLTSLTDLVISQNLL 255

Query: 188 VSPP 191
            + P
Sbjct: 256 ETIP 259



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 103/193 (53%), Gaps = 27/193 (13%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+SLT +L  +  LD+ +N++  LP SIG L  LK L + GN L  LP+ I N +SL  
Sbjct: 166 LPDSLT-QLRRLEELDLGNNEIYSLPESIGALVHLKDLWLDGNQLSELPQEIGNLKSLLC 224

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L +LP+ I                        + LTSL  L    N L+++P+
Sbjct: 225 LDVSENRLERLPEEI------------------------SGLTSLTDLVISQNLLETIPD 260

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L  L +L + QN   L  LP + G   SL EL ++ N++ TLP SIG L+KL  L+
Sbjct: 261 GIGKLKKLSILKVDQN--RLTQLPEATGDCESLTELVLTENRLLTLPKSIGKLKKLSNLN 318

Query: 182 LEGNPLVSPPMDV 194
            + N LVS P ++
Sbjct: 319 ADRNKLVSLPKEI 331



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 4/150 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE ++  L ++  L +  N L+ +P+ IG L KL +L V  N L  LP+   +C SL E
Sbjct: 235 LPEEISG-LTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEATGDCESLTE 293

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+L  LP +IG +L  L  L+ + NK+V LP+ +    SL V   R N L  +P 
Sbjct: 294 LVLTENRLLTLPKSIG-KLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPA 352

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLL 151
           +L     L VL+++ N   L  LP S+  L
Sbjct: 353 ELSQATELHVLDVAGN--RLLHLPLSLTTL 380



 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 2/138 (1%)

Query: 57  RSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
           R +E ++     L  +P+ I     +L+ L ++ N++  LP+    L  LR L    N +
Sbjct: 12  RHVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVRLRKLGLSDNEI 71

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + LP ++ N + L  L++S+N   +  +P SI    +L   D S N +T LP+S   L+ 
Sbjct: 72  QRLPPEIANFMQLVELDVSRN--DIPEIPESISFCKALQIADFSGNPLTRLPESFPELQN 129

Query: 177 LQKLSLEGNPLVSPPMDV 194
           L  LS+    L S P ++
Sbjct: 130 LTCLSVNDISLQSLPENI 147


>gi|418698103|ref|ZP_13259082.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410762807|gb|EKR28966.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 595

 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 108/184 (58%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++   +L  LP  IG L  L+ L++  NLL +LPK I    +L+EL+   N+L 
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
             P  I  EL  L++L ++ N+++ILP  +  L +L+ L    N L + P+++  L NL+
Sbjct: 108 TFPAVI-VELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +S+N   L  LP  IG L +L  LD+  N+ TTLP  IG L+ LQ L+L  N L + 
Sbjct: 167 KLWLSEN--RLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLATL 224

Query: 191 PMDV 194
           P+++
Sbjct: 225 PVEI 228



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 105/187 (56%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQL   P  I  L KL+ LD+S N L  LP  I   ++L++L    N
Sbjct: 91  GQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKN 150

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL   P  IG +L NL+ L ++ N++  LP+ +  L +L+ LD + N   +LP+++  L 
Sbjct: 151 KLTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQ 209

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+S N   L TLP  IG L +L EL +  N++T  P  IG L+ LQ L    N L
Sbjct: 210 NLQTLNLSDN--QLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRL 267

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 268 TALPKEM 274



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 102/183 (55%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L+++      LP  I  L  LK L +  N L+++P  I   ++LE LN   N+L +
Sbjct: 377 NLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELER 436

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ LS++ N + I P  +  L  L+ LD  +N   + P+++  L NL+ 
Sbjct: 437 LPKEIG-QLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQT 495

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LN+ +N   L  L   IG L +L ELD++ N+ T LP  IG L+KLQ L L  N L + P
Sbjct: 496 LNLQRN--QLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP 553

Query: 192 MDV 194
            ++
Sbjct: 554 TEI 556



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 9/197 (4%)

Query: 4   ESLTA------RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCR 57
           E LTA      +L N+  L++  N L  LP  IG L  L+ LD+  N L + P  I   +
Sbjct: 58  EKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQ 117

Query: 58  SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK 117
            LE L+ + N+L  LP+ IG  L NL+ L +  NK+   P+ +  L +L+ L    N L 
Sbjct: 118 KLESLDLSENRLIILPNEIG-RLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLT 176

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
           +LP+++  L NL+ L++  N     TLP  IG L +L  L++S N++ TLP  IG L+ L
Sbjct: 177 ALPKEIGQLKNLQTLDLQDN--QFTTLPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNL 234

Query: 178 QKLSLEGNPLVSPPMDV 194
           Q+L L  N L   P ++
Sbjct: 235 QELYLRNNRLTVFPKEI 251



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 101/180 (56%), Gaps = 3/180 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  L ++ N+L   P  IG L  L+ L +S N L +LPK I   ++L+ L+   N
Sbjct: 137 GRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDN 196

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP  IG +L NL+TL+++ N++  LP  +  L +L+ L  R N L   P+++  L 
Sbjct: 197 QFTTLPKEIG-QLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQ 255

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L   +N   L  LP  +G L +L  L++  N++T  P  IG L+ LQ L L  NPL
Sbjct: 256 NLQMLCSPEN--RLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPL 313



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 102/180 (56%), Gaps = 3/180 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +RL N+  L +  N LK +P+ IG L  L+ L++  N LE LPK I   R+L++L+ + N
Sbjct: 396 SRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQN 455

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+  P  I  +L  L+ L ++ N+    P+ +  L +L+ L+ + N L +L  ++  L 
Sbjct: 456 TLKIFPAEIE-QLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQ 514

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L+++ N      LP  IG L  L  LD+  N++TTLP  IG L+ LQ L L+ N L
Sbjct: 515 NLQELDLNDN--QFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQL 572



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 97/173 (56%), Gaps = 8/173 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  N+L  LP  IG L  L+ LD+  N   +LPK I   ++L+ LN + N
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDN 219

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +  N++ + P+ +  L +L++L +  N L +LP+++  L 
Sbjct: 220 QLATLPVEIG-QLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQ 278

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           NL+ LN+  N   L   P  IG L +L +L++  N     P S+   +++QKL
Sbjct: 279 NLQTLNLVNN--RLTVFPKEIGQLQNLQDLELLMN-----PLSLKERKRIQKL 324



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 103/238 (43%), Gaps = 53/238 (22%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L    N+L  LP  +G L  L+ L++  N L   PK I   ++L++L    N
Sbjct: 252 GQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMN 311

Query: 68  KL---------RQLPDT------------------------IGFEL-INLKTLSINCNKI 93
            L         +  PD+                          FEL +  K  S +  K+
Sbjct: 312 PLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKV 371

Query: 94  VI-----------------LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQ 136
           ++                 LP+ ++ L +L+ L   LN LK++P ++  L NLE LN+  
Sbjct: 372 ILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEA 431

Query: 137 NFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           N   LE LP  IG L +L +L +  N +   P  I  L+KLQKL L  N   + P ++
Sbjct: 432 N--ELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEI 487



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L + L+N +++ VLN+S   + L  LP  IG L +L EL++ +N +TTLP  IG L  
Sbjct: 38  RDLTKALQNPLDVRVLNLS--GEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLEN 95

Query: 177 LQKLSLEGNPLVSPPMDVVE 196
           LQ+L L  N L + P  +VE
Sbjct: 96  LQELDLRDNQLATFPAVIVE 115


>gi|93007183|ref|YP_581620.1| hypothetical protein Pcryo_2359 [Psychrobacter cryohalolentis K5]
 gi|92394861|gb|ABE76136.1| leucine-rich repeat protein [Psychrobacter cryohalolentis K5]
          Length = 296

 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 76/206 (36%), Positives = 118/206 (57%), Gaps = 12/206 (5%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE++   L+N+  + + +++L  LP+SIG L KL  + V  N L  LP +I   R L+ 
Sbjct: 94  LPEAI-GILVNLKQIHLLNHELTKLPDSIGNLKKLMFISVDRNNLTELPDSICKLRKLQV 152

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L A  N L +LP+ IG  L++L+ + +  NK+  LP S+THLT L +LD R N L  LP+
Sbjct: 153 LTATRNSLIKLPNEIG-SLMSLQLIELAGNKLNKLPSSITHLTELEILDIRWNRLTELPD 211

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L  L+ L+I +NF  L  LP SIG L  L E+    N IT +P+ I  L+++  L 
Sbjct: 212 TIGQLSELQELHIEENF--LTNLPDSIGELSYLEEIHFDNNHITRVPEGICNLKRINTLV 269

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLS 207
           L+ +        + E   ++VKG+L+
Sbjct: 270 LDNS--------IFENSSNSVKGFLN 287



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 100/167 (59%), Gaps = 6/167 (3%)

Query: 33  LSKLKVL-DVSGN--LLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSIN 89
           +S L++L D  GN   L  LP+ I    +L++++   ++L +LPD+IG  L  L  +S++
Sbjct: 75  MSHLQILRDYDGNSRCLTYLPEAIGILVNLKQIHLLNHELTKLPDSIG-NLKKLMFISVD 133

Query: 90  CNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIG 149
            N +  LP S+  L  L+VL A  N L  LP ++ +L++L+++ ++ N   L  LP SI 
Sbjct: 134 RNNLTELPDSICKLRKLQVLTATRNSLIKLPNEIGSLMSLQLIELAGN--KLNKLPSSIT 191

Query: 150 LLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
            L  L  LD+ +N++T LPD+IG L +LQ+L +E N L + P  + E
Sbjct: 192 HLTELEILDIRWNRLTELPDTIGQLSELQELHIEENFLTNLPDSIGE 238



 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 2/96 (2%)

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
           S++HL  LR  D    CL  LPE +  L+NL+ +++      L  LP SIG L  L+ + 
Sbjct: 74  SMSHLQILRDYDGNSRCLTYLPEAIGILVNLKQIHLLN--HELTKLPDSIGNLKKLMFIS 131

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           V  N +T LPDSI  LRKLQ L+   N L+  P ++
Sbjct: 132 VDRNNLTELPDSICKLRKLQVLTATRNSLIKLPNEI 167


>gi|308504609|ref|XP_003114488.1| CRE-LET-413 protein [Caenorhabditis remanei]
 gi|308261873|gb|EFP05826.1| CRE-LET-413 protein [Caenorhabditis remanei]
          Length = 772

 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 67/171 (39%), Positives = 101/171 (59%), Gaps = 3/171 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +LDV  N++  LP  IG L++L  L+++ N +  +P+T++NC+ L  LN N N   +LP+
Sbjct: 63  ILDVSDNEVSVLPPDIGQLTQLIELNLNRNTITDIPETLKNCKFLTNLNLNGNPFTRLPE 122

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
           +I  E  ++  LS+N   +  LP ++  L +LRVL+AR N LK++P  +  L  LE L++
Sbjct: 123 SI-CECSSITILSLNDTTLTSLPANIGSLVNLRVLEARENHLKTIPLSIVELKQLEELDL 181

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            QN   +E LP  IG L SL E     N + TLPDSI   R L +L +  N
Sbjct: 182 GQN--EIEDLPAKIGKLTSLREFYADMNNLGTLPDSISDCRMLDQLDVSEN 230



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/281 (29%), Positives = 136/281 (48%), Gaps = 20/281 (7%)

Query: 2   IPESLT-ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +P+S++  R+L+   LDV  NQ+  LP ++G +S L  L+VS N +  LP++I N + L+
Sbjct: 212 LPDSISDCRMLDQ--LDVSENQINRLPENLGSMSSLTDLNVSMNDIPELPRSIGNLKRLQ 269

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L    N L QL   IG     L  L +  N +  LP S+  L +L  L+   N L  +P
Sbjct: 270 MLKVERNNLTQLTPEIG-HCSALTELYLGQNMLTDLPDSIGDLKNLTTLNVDCNNLIEIP 328

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E + +  +L VL++ QN   +  LP +IG   ++  LDV+ NK+T+LP ++  L KLQ L
Sbjct: 329 ETIGSCKSLTVLSLRQNL--ISELPMTIGKCENMTVLDVASNKLTSLPFTVKVLYKLQAL 386

Query: 181 SLEGNPLVS----PPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGAL 236
            L  N   S      +   + G+  V  YL  +++    + +    V      G F G  
Sbjct: 387 WLSENQTQSILKLSEIRDAKTGIKVVTCYLLPQVD----AIEGGGHVQHQPDRGAFVGGP 442

Query: 237 RNHRSEERERFIMSDFRAIDGLASPRHIGMFSPRRLFSPRS 277
           + H  ++++     D       A+  H+G F       P++
Sbjct: 443 KVHFHDQQDSTFEEDR------AAEVHLGNFERHNTPHPKT 477



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 101/179 (56%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  N+++ LP  IG L+ L+      N L +LP +I +CR L++L+ + N++ +LP+ 
Sbjct: 179 LDLGQNEIEDLPAKIGKLTSLREFYADMNNLGTLPDSISDCRMLDQLDVSENQINRLPEN 238

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           +G  + +L  L+++ N I  LP+S+ +L  L++L    N L  L  ++ +   L  L + 
Sbjct: 239 LG-SMSSLTDLNVSMNDIPELPRSIGNLKRLQMLKVERNNLTQLTPEIGHCSALTELYLG 297

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           QN   L  LP SIG L +L  L+V  N +  +P++IG  + L  LSL  N +   PM +
Sbjct: 298 QNM--LTDLPDSIGDLKNLTTLNVDCNNLIEIPETIGSCKSLTVLSLRQNLISELPMTI 354



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 103/203 (50%), Gaps = 24/203 (11%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  ++ L+++ N +  +P ++     L  L+++GN    LP++I  C S+  L+ N  
Sbjct: 79  GQLTQLIELNLNRNTITDIPETLKNCKFLTNLNLNGNPFTRLPESICECSSITILSLNDT 138

Query: 68  KLRQLPDTIG----------------------FELINLKTLSINCNKIVILPQSLTHLTS 105
            L  LP  IG                       EL  L+ L +  N+I  LP  +  LTS
Sbjct: 139 TLTSLPANIGSLVNLRVLEARENHLKTIPLSIVELKQLEELDLGQNEIEDLPAKIGKLTS 198

Query: 106 LRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
           LR   A +N L +LP+ + +   L+ L++S+N   +  LP ++G + SL +L+VS N I 
Sbjct: 199 LREFYADMNNLGTLPDSISDCRMLDQLDVSEN--QINRLPENLGSMSSLTDLNVSMNDIP 256

Query: 166 TLPDSIGCLRKLQKLSLEGNPLV 188
            LP SIG L++LQ L +E N L 
Sbjct: 257 ELPRSIGNLKRLQMLKVERNNLT 279



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 107/209 (51%), Gaps = 27/209 (12%)

Query: 25  CLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLK 84
           CLP  + C  ++  LD S + L+S+P  I   R LE+LN   N +++L D   F L +L+
Sbjct: 6   CLP--MACQRQVDSLDRSQSNLQSVPTDIFRFRKLEDLNLTMNNIKEL-DRRLFTLRHLR 62

Query: 85  TLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI---------- 134
            L ++ N++ +LP  +  LT L  L+   N +  +PE L+N   L  LN+          
Sbjct: 63  ILDVSDNEVSVLPPDIGQLTQLIELNLNRNTITDIPETLKNCKFLTNLNLNGNPFTRLPE 122

Query: 135 -----------SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLE 183
                      S N   L +LP +IG L++L  L+   N + T+P SI  L++L++L L 
Sbjct: 123 SICECSSITILSLNDTTLTSLPANIGSLVNLRVLEARENHLKTIPLSIVELKQLEELDLG 182

Query: 184 GNPLVSPPMDVVEQGLSAVKGYLSEKMNN 212
            N +   P  + +  L++++ + ++ MNN
Sbjct: 183 QNEIEDLPAKIGK--LTSLREFYAD-MNN 208


>gi|114607924|ref|XP_001156152.1| PREDICTED: leucine-rich repeat-containing protein 1 isoform 1 [Pan
           troglodytes]
 gi|297678399|ref|XP_002817063.1| PREDICTED: leucine-rich repeat-containing protein 1 [Pongo abelii]
 gi|397517578|ref|XP_003828986.1| PREDICTED: leucine-rich repeat-containing protein 1 [Pan paniscus]
 gi|426353583|ref|XP_004044270.1| PREDICTED: leucine-rich repeat-containing protein 1 [Gorilla
           gorilla gorilla]
 gi|410213308|gb|JAA03873.1| leucine rich repeat containing 1 [Pan troglodytes]
 gi|410257926|gb|JAA16930.1| leucine rich repeat containing 1 [Pan troglodytes]
 gi|410336559|gb|JAA37226.1| leucine rich repeat containing 1 [Pan troglodytes]
          Length = 524

 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 112/193 (58%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 120 LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 179 LDLGNNEIYNLPESIG-ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPE 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L  L ISQN   LET+P  IG L  L  L V  N++T LP+++G    L +L 
Sbjct: 238 EISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELV 295

Query: 182 LEGNPLVSPPMDV 194
           L  N L++ P  +
Sbjct: 296 LTENQLLTLPKSI 308



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 108/195 (55%), Gaps = 7/195 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   AR L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L
Sbjct: 27  VPEEIYRYARSLEELLLD--ANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N++ ++P++I F    L+    + N +  LP+S   L +L  L      L+SL
Sbjct: 85  VELDVSRNEIPEIPESISF-CKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++ NL NL  L + +N   L  LP S+  L  L ELD+  N+I  LP+SIG L  L+ 
Sbjct: 144 PENIGNLYNLASLELRENL--LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKD 201

Query: 180 LSLEGNPLVSPPMDV 194
           L L+GN L   P ++
Sbjct: 202 LWLDGNQLSELPQEI 216



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 121/250 (48%), Gaps = 32/250 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N++  +P SI     L+V D SGN L  LP++    ++L  L+ N  
Sbjct: 79  ANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDI 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD--------------ARL 113
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD              A L
Sbjct: 139 SLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALL 197

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L  LP+++ NL NL  L++S+N   LE LP  I  L SL +L +S N +
Sbjct: 198 HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN--RLERLPEEISGLTSLTDLVISQNLL 255

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVG 224
            T+PD IG L+KL  L ++ N L   P + V    S  +  L+E  N     PK    +G
Sbjct: 256 ETIPDGIGKLKKLSILKVDQNRLTQLP-EAVGDCESLTELVLTE--NQLLTLPKS---IG 309

Query: 225 KLVKYGTFNG 234
           KL K    N 
Sbjct: 310 KLKKLSNLNA 319



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 108/207 (52%), Gaps = 6/207 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+ A LL++  L +  NQL  LP  IG L  L  LDVS N LE LP+ I    SL +
Sbjct: 189 LPESIGA-LLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTD 247

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L  +PD IG +L  L  L ++ N++  LP+++    SL  L    N L +LP+
Sbjct: 248 LVISQNLLETIPDGIG-KLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPK 306

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L  L  LN  +N   L +LP  IG   SL    V  N++T +P  +    +L  L 
Sbjct: 307 SIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLD 364

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSE 208
           + GN L+  P+ +    L A+  +LS+
Sbjct: 365 VAGNRLLHLPLSLTALKLKAL--WLSD 389



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 96/176 (54%), Gaps = 4/176 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N++ LDV  N+L+ LP  I  L+ L  L +S NLLE++P  I   + L  L  + N+L
Sbjct: 219 LKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRL 278

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            QLP+ +G +  +L  L +  N+++ LP+S+  L  L  L+A  N L SLP+++    +L
Sbjct: 279 TQLPEAVG-DCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSL 337

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            V  +  N   L  +P  +     L  LDV+ N++  LP S+  L KL+ L L  N
Sbjct: 338 TVFCVRDN--RLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTAL-KLKALWLSDN 390



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 2/138 (1%)

Query: 57  RSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
           R +E ++     L  +P+ I     +L+ L ++ N++  LP+    L  LR L    N +
Sbjct: 12  RHVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + LP ++ N + L  L++S+N   +  +P SI    +L   D S N +T LP+S   L+ 
Sbjct: 72  QRLPPEIANFMQLVELDVSRN--EIPEIPESISFCKALQVADFSGNPLTRLPESFPELQN 129

Query: 177 LQKLSLEGNPLVSPPMDV 194
           L  LS+    L S P ++
Sbjct: 130 LTCLSVNDISLQSLPENI 147


>gi|410967549|ref|XP_003990281.1| PREDICTED: leucine-rich repeat-containing protein 40 [Felis catus]
          Length = 592

 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 83/216 (38%), Positives = 117/216 (54%), Gaps = 30/216 (13%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P S  + L ++V L++ SNQLK LP  I  + +LK LD + N LE++P  + N  SLE 
Sbjct: 179 VPASFCS-LSSLVRLNLSSNQLKSLPAEISGMKRLKHLDCNSNFLETVPPELANMESLEL 237

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVIL-PQSLTHLTSLRVLDARLNCLKSLP 120
           L    NKLR LP+     L  LK L +  N+I +L P+ L HL S+ VLD R N LKS+P
Sbjct: 238 LYLRRNKLRFLPEFPSCRL--LKELHVGENQIEMLGPEHLKHLNSILVLDLRDNKLKSVP 295

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           ++                         I LL SL  LD+S N I++LP S+G L  L+ L
Sbjct: 296 DE-------------------------ITLLQSLERLDLSNNDISSLPCSLGKLH-LKFL 329

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKS 216
           +LEGNPL +   +++ +G   V  YL  K+ +D  S
Sbjct: 330 ALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDEPS 365



 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 26/158 (16%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           S + +  +  N L SLP  I    +L++LN + NKL+                       
Sbjct: 95  SNVTMTQIHDNQLTSLPSAIRELENLQKLNVSHNKLQ----------------------- 131

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
            ILP+ +T+L +L+ L  + N L  +PE  E L NLE L++S N   L T+P S   L S
Sbjct: 132 -ILPKEITNLRNLKGLYLQHNELTCIPEGFEQLFNLEDLDLSNN--RLTTVPASFCSLSS 188

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LV L++S N++ +LP  I  +++L+ L    N L + P
Sbjct: 189 LVRLNLSSNQLKSLPAEISGMKRLKHLDCNSNFLETVP 226



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 12/203 (5%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSL-EELNANFNKLR 70
           +LD    Q   +P+ +    K  ++   + S N L  +PK I   + +  ++N +FN+L 
Sbjct: 393 ILDYSDKQTTLIPDEVFDAVKSNIVTSVNFSKNQLCEIPKRIVELKEMVSDVNLSFNRL- 451

Query: 71  QLPDTIGFELINLKTLS---INCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
               +I  +L  L+ L+   +  N +  LP+ +  L  L+ ++   N  K LPE L ++ 
Sbjct: 452 ---SSISLDLCMLQKLTFLDLRNNFLNSLPEEMESLIRLQTINLSFNRFKILPEVLYHIP 508

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE + IS N Q     P  +  +  L+ LD+  N +  +P  +G    L+ L L+GNP 
Sbjct: 509 TLETILISNN-QVGSVDPQKMKAMEKLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPF 567

Query: 188 VSPPMDVVEQGLSAVKGYLSEKM 210
             P   ++ +G +A+  YL +++
Sbjct: 568 RVPRAAILMKGTAAILEYLRDRI 590



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 67/120 (55%), Gaps = 2/120 (1%)

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
           TI F   N+    I+ N++  LP ++  L +L+ L+   N L+ LP+++ NL NL+ L +
Sbjct: 89  TILFMYSNVTMTQIHDNQLTSLPSAIRELENLQKLNVSHNKLQILPKEITNLRNLKGLYL 148

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N   L  +P     L +L +LD+S N++TT+P S   L  L +L+L  N L S P ++
Sbjct: 149 QHN--ELTCIPEGFEQLFNLEDLDLSNNRLTTVPASFCSLSSLVRLNLSSNQLKSLPAEI 206


>gi|194211220|ref|XP_001498327.2| PREDICTED: leucine-rich repeat-containing protein 40-like [Equus
           caballus]
          Length = 803

 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 82/217 (37%), Positives = 120/217 (55%), Gaps = 30/217 (13%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S ++ L ++V L++ SNQLK LP  I  + +LK LD + NLLE++P  + +  SLE
Sbjct: 389 IVPASFSS-LSSLVRLNLSSNQLKSLPAEISGMKRLKHLDCNSNLLETIPPELASMESLE 447

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVIL-PQSLTHLTSLRVLDARLNCLKSL 119
            L    NKLR LP+    +L  LK L +  N+I +L  + L HL S+ VLD R N LKS+
Sbjct: 448 LLYLRRNKLRFLPEFPSCKL--LKELHVGENQIEMLGAEHLKHLNSILVLDLRDNKLKSV 505

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P++                         I LL SL  LD+S N I++LP S+G L  L+ 
Sbjct: 506 PDE-------------------------ITLLQSLERLDLSNNDISSLPYSLGKLH-LKF 539

Query: 180 LSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKS 216
           L+LEGNPL +   +++ +G   V  YL  K+ +D  S
Sbjct: 540 LALEGNPLRTIRREIINKGTQEVLKYLQSKIKDDEPS 576



 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 93/176 (52%), Gaps = 3/176 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           ++  L + +N+L+ L + +  L  L VLD+  N L SLP  I    +L++LN + NKL+ 
Sbjct: 284 DLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKI 343

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ I   L NLK L +  N++  LP+    L SL  LD   N L  +P    +L +L  
Sbjct: 344 LPEEIT-NLRNLKGLYLQHNELTCLPEGFEQLFSLEDLDLSNNRLTIVPASFSSLSSLVR 402

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           LN+S N   L++LP  I  +  L  LD + N + T+P  +  +  L+ L L  N L
Sbjct: 403 LNLSSN--QLKSLPAEISGMKRLKHLDCNSNLLETIPPELASMESLELLYLRRNKL 456



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/162 (35%), Positives = 93/162 (57%), Gaps = 3/162 (1%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           + L  L +S N L+SL   +    +L  L+ + N+L  LP  I  EL NL+ L+++ NK+
Sbjct: 283 TDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIR-ELENLQKLNVSHNKL 341

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
            ILP+ +T+L +L+ L  + N L  LPE  E L +LE L++S N   L  +P S   L S
Sbjct: 342 KILPEEITNLRNLKGLYLQHNELTCLPEGFEQLFSLEDLDLSNN--RLTIVPASFSSLSS 399

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
           LV L++S N++ +LP  I  +++L+ L    N L + P ++ 
Sbjct: 400 LVRLNLSSNQLKSLPAEISGMKRLKHLDCNSNLLETIPPELA 441



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 27/207 (13%)

Query: 30  IGCLSKLKVLDVSGNLLESLPKTIENCRS---LEELNANFNKLRQLPDTIGFELINLKT- 85
           +  +  LK+LD S      +P  + +      +  +N + N+L ++P  I  EL  + + 
Sbjct: 596 VHSIVTLKILDYSDKQAVLIPDEVFDAVKSNIVTSVNFSKNQLCEIPKRI-IELKEMVSD 654

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN-------- 137
           ++++ NK+  +   L  L  L  LD R N L SLPE++E+LI L+ +N+S N        
Sbjct: 655 VNLSFNKLSFVSLELCTLQKLTFLDLRNNFLNSLPEEMESLIRLQTINLSFNRFKILPEV 714

Query: 138 ---FQYLETL-----------PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLE 183
                 LET+           P  +  + +L+ LD+  N +  +P  +G    L+ L L+
Sbjct: 715 LYRIPTLETILISNNQVGSVDPQKMKTMENLITLDLQNNDLLQIPPELGNCVNLRTLLLD 774

Query: 184 GNPLVSPPMDVVEQGLSAVKGYLSEKM 210
           GNP   P   ++ +G +A+  YL +++
Sbjct: 775 GNPFRVPRAAILMKGTAAILEYLRDRI 801



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 65/138 (47%), Gaps = 21/138 (15%)

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
           +E  +L  L I+ NK+  L   L  L +L VLD   N L SLP  +  L NL+ LN+S N
Sbjct: 280 WEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHN 339

Query: 138 -------------------FQY--LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
                               Q+  L  LP     L SL +LD+S N++T +P S   L  
Sbjct: 340 KLKILPEEITNLRNLKGLYLQHNELTCLPEGFEQLFSLEDLDLSNNRLTIVPASFSSLSS 399

Query: 177 LQKLSLEGNPLVSPPMDV 194
           L +L+L  N L S P ++
Sbjct: 400 LVRLNLSSNQLKSLPAEI 417



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 67/118 (56%), Gaps = 2/118 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +   +  L KL  LD+  N L SLP+ +E+   L+ +N +FN+ + LP+ + + +
Sbjct: 660 NKLSFVSLELCTLQKLTFLDLRNNFLNSLPEEMESLIRLQTINLSFNRFKILPEVL-YRI 718

Query: 81  INLKTLSINCNKI-VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
             L+T+ I+ N++  + PQ +  + +L  LD + N L  +P +L N +NL  L +  N
Sbjct: 719 PTLETILISNNQVGSVDPQKMKTMENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGN 776


>gi|158257928|dbj|BAF84937.1| unnamed protein product [Homo sapiens]
          Length = 524

 Score =  103 bits (257), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 112/193 (58%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 120 LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 179 LDLGNNEIYNLPESIG-ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPE 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L  L ISQN   LET+P  IG L  L  L V  N++T LP+++G    L +L 
Sbjct: 238 EISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLTQLPEAVGECESLTELV 295

Query: 182 LEGNPLVSPPMDV 194
           L  N L++ P  +
Sbjct: 296 LTENQLLTLPKSI 308



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 108/195 (55%), Gaps = 7/195 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   AR L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L
Sbjct: 27  VPEEIYRYARSLEELLLD--ANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N++ ++P++I F    L+    + N +  LP+S   L +L  L      L+SL
Sbjct: 85  VELDVSRNEIPEIPESISF-CKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++ NL NL  L + +N   L  LP S+  L  L ELD+  N+I  LP+SIG L  L+ 
Sbjct: 144 PENIGNLYNLASLELRENL--LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKD 201

Query: 180 LSLEGNPLVSPPMDV 194
           L L+GN L   P ++
Sbjct: 202 LWLDGNQLSELPQEI 216



 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 122/250 (48%), Gaps = 32/250 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N++  +P SI     L+V D SGN L  LP++    ++L  L+ N  
Sbjct: 79  ANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDI 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD--------------ARL 113
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD              A L
Sbjct: 139 SLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALL 197

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L  LP+++ NL NL  L++S+N   LE LP  I  L SL +L +S N +
Sbjct: 198 HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN--RLERLPEEISGLTSLTDLVISQNLL 255

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVG 224
            T+PD IG L+KL  L ++ N L   P + V +  S  +  L+E  N     PK    +G
Sbjct: 256 ETIPDGIGKLKKLSILKVDQNRLTQLP-EAVGECESLTELVLTE--NQLLTLPKS---IG 309

Query: 225 KLVKYGTFNG 234
           KL K    N 
Sbjct: 310 KLKKLSNLNA 319



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 108/207 (52%), Gaps = 6/207 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+ A LL++  L +  NQL  LP  IG L  L  LDVS N LE LP+ I    SL +
Sbjct: 189 LPESIGA-LLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTD 247

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L  +PD IG +L  L  L ++ N++  LP+++    SL  L    N L +LP+
Sbjct: 248 LVISQNLLETIPDGIG-KLKKLSILKVDQNRLTQLPEAVGECESLTELVLTENQLLTLPK 306

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L  L  LN  +N   L +LP  IG   SL    V  N++T +P  +    +L  L 
Sbjct: 307 SIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLD 364

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSE 208
           + GN L+  P+ +    L A+  +LS+
Sbjct: 365 VAGNRLLHLPLSLTALKLKAL--WLSD 389



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 96/176 (54%), Gaps = 4/176 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N++ LDV  N+L+ LP  I  L+ L  L +S NLLE++P  I   + L  L  + N+L
Sbjct: 219 LKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRL 278

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            QLP+ +G E  +L  L +  N+++ LP+S+  L  L  L+A  N L SLP+++    +L
Sbjct: 279 TQLPEAVG-ECESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSL 337

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            V  +  N   L  +P  +     L  LDV+ N++  LP S+  L KL+ L L  N
Sbjct: 338 TVFCVRDN--RLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTAL-KLKALWLSDN 390



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 2/138 (1%)

Query: 57  RSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
           R +E ++     L  +P+ I     +L+ L ++ N++  LP+    L  LR L    N +
Sbjct: 12  RHVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + LP ++ N + L  L++S+N   +  +P SI    +L   D S N +T LP+S   L+ 
Sbjct: 72  QRLPPEIANFMQLVELDVSRN--EIPEIPESISFCKALQVADFSGNPLTRLPESFPELQN 129

Query: 177 LQKLSLEGNPLVSPPMDV 194
           L  LS+    L S P ++
Sbjct: 130 LTCLSVNDISLQSLPENI 147


>gi|422002277|ref|ZP_16349515.1| hypothetical protein LSS_02172 [Leptospira santarosai serovar
           Shermani str. LT 821]
 gi|417259209|gb|EKT88588.1| hypothetical protein LSS_02172 [Leptospira santarosai serovar
           Shermani str. LT 821]
          Length = 533

 Score =  103 bits (257), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 108/193 (55%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L N+  L +  NQL  LP  IG L  L+ L++  N L +LP+ I   ++L+ 
Sbjct: 191 LPQEI-GKLQNLKYLRLAYNQLTTLPKEIGRLENLQDLNIFNNQLITLPQEIGTLQNLQS 249

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N+L  LP  IG  L  L+ L +  N++  LPQ +  L  L  L    N LKSLP+
Sbjct: 250 LNLANNRLVTLPKEIG-TLQKLEWLYLTNNQLATLPQEIGKLQKLEWLGLTNNQLKSLPQ 308

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L NL+ L +  N   LE+ P  IG L +L  L + YN+ TTLP+ IG L +L  L+
Sbjct: 309 EIGKLQNLKELILENN--RLESFPKEIGTLSNLQRLHLEYNRFTTLPEEIGTLHRLPWLN 366

Query: 182 LEGNPLVSPPMDV 194
           LE N L + P ++
Sbjct: 367 LEHNQLTTLPQEI 379



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 111/185 (60%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+  L + +NQLK LP  I  L KLK L +S N L++LPK I   ++LE L+   N+L
Sbjct: 60  LQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLKTLPKEIGTLQNLEVLDLYKNQL 119

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           R LP  IG +L +L+ L +  N+++ LPQ +  L  L  L+   N L+ L +++  L +L
Sbjct: 120 RTLPSEIG-KLRSLERLHLEHNQLITLPQEIGTLQDLEELNLANNQLRILSKEIGTLQHL 178

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           + L++  N   L TLP  IG L +L  L ++YN++TTLP  IG L  LQ L++  N L++
Sbjct: 179 QDLSVFNN--QLITLPQEIGKLQNLKYLRLAYNQLTTLPKEIGRLENLQDLNIFNNQLIT 236

Query: 190 PPMDV 194
            P ++
Sbjct: 237 LPQEI 241



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 105/179 (58%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  NQLK LP  IG L  L+VLD+  N L +LP  I   RSLE L+   N+L  LP  
Sbjct: 89  LYLSENQLKTLPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLERLHLEHNQLITLPQE 148

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L +L+ L++  N++ IL + +  L  L+ L    N L +LP+++  L NL+ L ++
Sbjct: 149 IG-TLQDLEELNLANNQLRILSKEIGTLQHLQDLSVFNNQLITLPQEIGKLQNLKYLRLA 207

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L TLP  IG L +L +L++  N++ TLP  IG L+ LQ L+L  N LV+ P ++
Sbjct: 208 YN--QLTTLPKEIGRLENLQDLNIFNNQLITLPQEIGTLQNLQSLNLANNRLVTLPKEI 264



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/193 (36%), Positives = 111/193 (57%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L  +  L + +NQLK LP  IG L  LK L +  N LES PK I    +L+ 
Sbjct: 283 LPQEI-GKLQKLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQR 341

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+  +N+   LP+ IG  L  L  L++  N++  LPQ +  L  L  L+   N L +LP+
Sbjct: 342 LHLEYNRFTTLPEEIG-TLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPK 400

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L  L+ L ++ N   L TLP  IG L +L +LD+S N++ TLP+ IG L++L+ LS
Sbjct: 401 EIGTLRKLQHLYLANN--QLATLPKEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLS 458

Query: 182 LEGNPLVSPPMDV 194
           L+ N L +   ++
Sbjct: 459 LKNNQLRTLSQEI 471



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/185 (38%), Positives = 104/185 (56%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+  L++ +N+L  LP  IG L KL+ L ++ N L +LP+ I   + LE L    N+L
Sbjct: 244 LQNLQSLNLANNRLVTLPKEIGTLQKLEWLYLTNNQLATLPQEIGKLQKLEWLGLTNNQL 303

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           + LP  IG +L NLK L +  N++   P+ +  L++L+ L    N   +LPE++  L  L
Sbjct: 304 KSLPQEIG-KLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNRFTTLPEEIGTLHRL 362

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
             LN+  N   L TLP  IG L  L  L++  N++ TLP  IG LRKLQ L L  N L +
Sbjct: 363 PWLNLEHN--QLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLRKLQHLYLANNQLAT 420

Query: 190 PPMDV 194
            P ++
Sbjct: 421 LPKEI 425



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 107/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  L++ +NQL  LP  IG L  L+ L+++ N L +LPK I   + LE L    N
Sbjct: 219 GRLENLQDLNIFNNQLITLPQEIGTLQNLQSLNLANNRLVTLPKEIGTLQKLEWLYLTNN 278

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L  L+ L +  N++  LPQ +  L +L+ L    N L+S P+++  L 
Sbjct: 279 QLATLPQEIG-KLQKLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLS 337

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++  N     TLP  IG L  L  L++ +N++TTLP  IG L +L+ L+L  N L
Sbjct: 338 NLQRLHLEYN--RFTTLPEEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRL 395

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 396 ATLPKEI 402



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/179 (38%), Positives = 100/179 (55%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L + +NQL  LP  IG L KL+ L ++ N L+SLP+ I   ++L+EL    N+L   P  
Sbjct: 273 LYLTNNQLATLPQEIGKLQKLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKE 332

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L NL+ L +  N+   LP+ +  L  L  L+   N L +LP+++  L  LE LN+ 
Sbjct: 333 IG-TLSNLQRLHLEYNRFTTLPEEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLY 391

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L TLP  IG L  L  L ++ N++ TLP  IG L+ L+ L L  N LV+ P ++
Sbjct: 392 NN--RLATLPKEIGTLRKLQHLYLANNQLATLPKEIGQLQNLKDLDLSDNQLVTLPEEI 448



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/179 (38%), Positives = 103/179 (57%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  NQL  LP  IG L  L+ L+++ N L  L K I   + L++L+   N+L  LP  
Sbjct: 135 LHLEHNQLITLPQEIGTLQDLEELNLANNQLRILSKEIGTLQHLQDLSVFNNQLITLPQE 194

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NLK L +  N++  LP+ +  L +L+ L+   N L +LP+++  L NL+ LN++
Sbjct: 195 IG-KLQNLKYLRLAYNQLTTLPKEIGRLENLQDLNIFNNQLITLPQEIGTLQNLQSLNLA 253

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L TLP  IG L  L  L ++ N++ TLP  IG L+KL+ L L  N L S P ++
Sbjct: 254 NN--RLVTLPKEIGTLQKLEWLYLTNNQLATLPQEIGKLQKLEWLGLTNNQLKSLPQEI 310



 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 77/156 (49%), Gaps = 26/156 (16%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L++  NQL  LP  IG L +L+ L++  N L +LPK I   R L+ L    N+L  LP  
Sbjct: 365 LNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLRKLQHLYLANNQLATLPKE 424

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NLK L ++ N++V LP+ +  L  L  L  + N L++L ++             
Sbjct: 425 IG-QLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQLRTLSQE------------- 470

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
                       IG L +L +LD+S N  TT P  I
Sbjct: 471 ------------IGQLQNLKDLDLSGNPFTTFPQEI 494



 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 37/69 (53%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQL  LP  IG L +L+ L +  N L +L + I   ++L++L+ + N
Sbjct: 426 GQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQLRTLSQEIGQLQNLKDLDLSGN 485

Query: 68  KLRQLPDTI 76
                P  I
Sbjct: 486 PFTTFPQEI 494


>gi|95113664|ref|NP_060684.4| leucine-rich repeat-containing protein 1 [Homo sapiens]
 gi|50401149|sp|Q9BTT6.1|LRRC1_HUMAN RecName: Full=Leucine-rich repeat-containing protein 1; AltName:
           Full=LANO adapter protein; AltName: Full=LAP and no PDZ
           protein
 gi|14582756|gb|AAK69623.1|AF332199_1 leucine-rich repeats protein [Homo sapiens]
 gi|14701834|gb|AAK72246.1|AF359380_1 LANO adaptor protein [Homo sapiens]
 gi|13112035|gb|AAH03193.1| Leucine rich repeat containing 1 [Homo sapiens]
 gi|119624835|gb|EAX04430.1| leucine rich repeat containing 1, isoform CRA_b [Homo sapiens]
 gi|157928286|gb|ABW03439.1| leucine rich repeat containing 1 [synthetic construct]
          Length = 524

 Score =  103 bits (257), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 112/193 (58%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 120 LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 179 LDLGNNEIYNLPESIG-ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPE 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L  L ISQN   LET+P  IG L  L  L V  N++T LP+++G    L +L 
Sbjct: 238 EISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLTQLPEAVGECESLTELV 295

Query: 182 LEGNPLVSPPMDV 194
           L  N L++ P  +
Sbjct: 296 LTENQLLTLPKSI 308



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 108/195 (55%), Gaps = 7/195 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   AR L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L
Sbjct: 27  VPEEIYRYARSLEELLLD--ANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N++ ++P++I F    L+    + N +  LP+S   L +L  L      L+SL
Sbjct: 85  VELDVSRNEIPEIPESISF-CKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++ NL NL  L + +N   L  LP S+  L  L ELD+  N+I  LP+SIG L  L+ 
Sbjct: 144 PENIGNLYNLASLELRENL--LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKD 201

Query: 180 LSLEGNPLVSPPMDV 194
           L L+GN L   P ++
Sbjct: 202 LWLDGNQLSELPQEI 216



 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 122/250 (48%), Gaps = 32/250 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N++  +P SI     L+V D SGN L  LP++    ++L  L+ N  
Sbjct: 79  ANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDI 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD--------------ARL 113
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD              A L
Sbjct: 139 SLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALL 197

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L  LP+++ NL NL  L++S+N   LE LP  I  L SL +L +S N +
Sbjct: 198 HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN--RLERLPEEISGLTSLTDLVISQNLL 255

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVG 224
            T+PD IG L+KL  L ++ N L   P + V +  S  +  L+E  N     PK    +G
Sbjct: 256 ETIPDGIGKLKKLSILKVDQNRLTQLP-EAVGECESLTELVLTE--NQLLTLPKS---IG 309

Query: 225 KLVKYGTFNG 234
           KL K    N 
Sbjct: 310 KLKKLSNLNA 319



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 108/207 (52%), Gaps = 6/207 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+ A LL++  L +  NQL  LP  IG L  L  LDVS N LE LP+ I    SL +
Sbjct: 189 LPESIGA-LLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTD 247

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L  +PD IG +L  L  L ++ N++  LP+++    SL  L    N L +LP+
Sbjct: 248 LVISQNLLETIPDGIG-KLKKLSILKVDQNRLTQLPEAVGECESLTELVLTENQLLTLPK 306

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L  L  LN  +N   L +LP  IG   SL    V  N++T +P  +    +L  L 
Sbjct: 307 SIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLD 364

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSE 208
           + GN L+  P+ +    L A+  +LS+
Sbjct: 365 VAGNRLLHLPLSLTALKLKAL--WLSD 389



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 96/176 (54%), Gaps = 4/176 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N++ LDV  N+L+ LP  I  L+ L  L +S NLLE++P  I   + L  L  + N+L
Sbjct: 219 LKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRL 278

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            QLP+ +G E  +L  L +  N+++ LP+S+  L  L  L+A  N L SLP+++    +L
Sbjct: 279 TQLPEAVG-ECESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSL 337

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            V  +  N   L  +P  +     L  LDV+ N++  LP S+  L KL+ L L  N
Sbjct: 338 TVFCVRDN--RLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTAL-KLKALWLSDN 390



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 2/138 (1%)

Query: 57  RSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
           R +E ++     L  +P+ I     +L+ L ++ N++  LP+    L  LR L    N +
Sbjct: 12  RHVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + LP ++ N + L  L++S+N   +  +P SI    +L   D S N +T LP+S   L+ 
Sbjct: 72  QRLPPEIANFMQLVELDVSRN--EIPEIPESISFCKALQVADFSGNPLTRLPESFPELQN 129

Query: 177 LQKLSLEGNPLVSPPMDV 194
           L  LS+    L S P ++
Sbjct: 130 LTCLSVNDISLQSLPENI 147


>gi|418739213|ref|ZP_13295601.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|410753465|gb|EKR10430.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 281

 Score =  103 bits (257), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 70/179 (39%), Positives = 105/179 (58%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+ +NQL  LP  IG L KL+ L +  N L +LPK IE  + LE L+   N+L  LP  
Sbjct: 65  LDLSNNQLVTLPKEIGKLQKLRYLYLDHNQLTTLPKEIEYLKDLESLDLRNNQLTTLPKE 124

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           I + L  L+ L +N N++  +P+ + +L  L+ L    N L +LP+++  L  L +L++ 
Sbjct: 125 IEY-LKKLQVLDLNDNQLTTIPKEIGYLKKLQELYLINNQLTTLPKEIGYLEELWLLDLR 183

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +N   L TLP  IG L  L  LD+  N++TTLP  IG L+KL+KL L+ N   + P ++
Sbjct: 184 KN--QLTTLPKEIGYLEELWLLDLRKNQLTTLPKEIGKLQKLEKLYLKNNQFTTFPKEI 240



 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 122/224 (54%), Gaps = 11/224 (4%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           ++V  LD+  NQL  LP  I  L +L+ LD+S N L +LPK I   + L  L  + N+L 
Sbjct: 37  MDVRTLDLSKNQLTTLPKEIEKLKELESLDLSNNQLVTLPKEIGKLQKLRYLYLDHNQLT 96

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  I + L +L++L +  N++  LP+ + +L  L+VLD   N L ++P+++  L  L+
Sbjct: 97  TLPKEIEY-LKDLESLDLRNNQLTTLPKEIEYLKKLQVLDLNDNQLTTIPKEIGYLKKLQ 155

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +  N   L TLP  IG L  L  LD+  N++TTLP  IG L +L  L L  N L + 
Sbjct: 156 ELYLINN--QLTTLPKEIGYLEELWLLDLRKNQLTTLPKEIGYLEELWLLDLRKNQLTTL 213

Query: 191 PMDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFN 233
           P ++ + Q L   K YL  K N     PK+   +GKL K  T N
Sbjct: 214 PKEIGKLQKLE--KLYL--KNNQFTTFPKE---IGKLQKLNTLN 250



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 108/201 (53%), Gaps = 3/201 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  +  L +  NQL  LP  I  L  L+ LD+  N L +LPK IE  + L+ L+ N N
Sbjct: 80  GKLQKLRYLYLDHNQLTTLPKEIEYLKDLESLDLRNNQLTTLPKEIEYLKKLQVLDLNDN 139

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  IG+ L  L+ L +  N++  LP+ + +L  L +LD R N L +LP+++  L 
Sbjct: 140 QLTTIPKEIGY-LKKLQELYLINNQLTTLPKEIGYLEELWLLDLRKNQLTTLPKEIGYLE 198

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L +L++ +N   L TLP  IG L  L +L +  N+ TT P  IG L+KL  L+L+  P 
Sbjct: 199 ELWLLDLRKN--QLTTLPKEIGKLQKLEKLYLKNNQFTTFPKEIGKLQKLNTLNLDDIPA 256

Query: 188 VSPPMDVVEQGLSAVKGYLSE 208
           +      +++ L     Y  E
Sbjct: 257 LKSQEKKIQKLLPKASIYFIE 277


>gi|332017140|gb|EGI57939.1| Leucine-rich repeat protein soc-2-like protein [Acromyrmex
           echinatior]
          Length = 615

 Score =  103 bits (257), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 68/174 (39%), Positives = 104/174 (59%), Gaps = 3/174 (1%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           ++ N+L  LP  IG LS L+ L +S N L +LP T+EN +SL  L+   NKL  +PD + 
Sbjct: 164 LYGNKLTTLPPEIGYLSNLETLALSENSLTNLPNTLENLKSLRVLDLRHNKLIVIPDVV- 222

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
           ++L +L TL +  N++  +  ++ +LT+L +L  R N +K LP  +  L+NL   ++S N
Sbjct: 223 YKLTSLTTLFLRFNRVKYVKNNICNLTNLTMLSFRENKIKELPAGIGELVNLLTFDVSHN 282

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
             +LE LP  IG  + L  LDV +N++  LPD+IG L  L +L +  N L S P
Sbjct: 283 --HLEHLPPEIGKCVQLSTLDVQHNELLDLPDTIGNLVSLTRLGIRYNKLTSIP 334



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 101/198 (51%), Gaps = 8/198 (4%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+  L +  N L  LPN++  L  L+VLD+  N L  +P  +    SL  L   FN++
Sbjct: 179 LSNLETLALSENSLTNLPNTLENLKSLRVLDLRHNKLIVIPDVVYKLTSLTTLFLRFNRV 238

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           + + + I   L NL  LS   NKI  LP  +  L +L   D   N L+ LP ++   + L
Sbjct: 239 KYVKNNI-CNLTNLTMLSFRENKIKELPAGIGELVNLLTFDVSHNHLEHLPPEIGKCVQL 297

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
             L++  N   L  LP +IG L+SL  L + YNK+T++P S+   + + + S+EGN +  
Sbjct: 298 STLDVQHN--ELLDLPDTIGNLVSLTRLGIRYNKLTSIPKSLANCKLMDEFSVEGNQISH 355

Query: 190 PPMDVVEQGLSAVKGYLS 207
            P      GL A   YL+
Sbjct: 356 LP-----DGLLASLSYLT 368



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 102/235 (43%), Gaps = 52/235 (22%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+ +L    N++K LP  IG L  L   DVS N LE LP  I  C  L  L+   N+L
Sbjct: 248 LTNLTMLSFRENKIKELPAGIGELVNLLTFDVSHNHLEHLPPEIGKCVQLSTLDVQHNEL 307

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDL------ 123
             LPDTIG  L++L  L I  NK+  +P+SL +   +       N +  LP+ L      
Sbjct: 308 LDLPDTIG-NLVSLTRLGIRYNKLTSIPKSLANCKLMDEFSVEGNQISHLPDGLLASLSY 366

Query: 124 -------ENLI------------------------------------NLEVLNISQNFQY 140
                   NL                                     NL  LN+ +N   
Sbjct: 367 LTTITLSRNLFTSYPAGGPGQFVNAYSINVEHNEIDKIPYGIFSRSKNLTKLNMKEN--K 424

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
           L TLP  IG  +++VEL++  N++T LPD I CL+ L+ L L  N L   P  +V
Sbjct: 425 LNTLPLDIGSWVAMVELNLGTNQLTKLPDDIQCLQSLEILILSNNGLKHIPTTIV 479



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 98/194 (50%), Gaps = 25/194 (12%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +V L++ +NQL  LP+ I CL  L++L +S N L+ +P TI N + L  L+   N +  L
Sbjct: 438 MVELNLGTNQLTKLPDDIQCLQSLEILILSNNGLKHIPTTIVNLQKLRVLDLEENYIDVL 497

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P+ IG  +  L+ L +  NK+  LP+++ HL +L  L    N L  LPE++  L +LE L
Sbjct: 498 PNEIGL-MTELQKLILQSNKLTELPRTIGHLRNLTYLSVGENQLTYLPEEVGTLESLESL 556

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
            ++ N + L  LP+ + L                        + L  +S+E  PL   PM
Sbjct: 557 YLNDN-KSLHNLPFELAL-----------------------CKNLGIMSIENCPLSHIPM 592

Query: 193 DVVEQGLSAVKGYL 206
           ++V  G S V  +L
Sbjct: 593 EIVAGGPSLVIQFL 606



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 98/195 (50%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +P+ L A L  +  + +  N     P    G       ++V  N ++ +P  I    ++L
Sbjct: 356 LPDGLLASLSYLTTITLSRNLFTSYPAGGPGQFVNAYSINVEHNEIDKIPYGIFSRSKNL 415

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   NKL  LP  IG   + +  L++  N++  LP  +  L SL +L    N LK +
Sbjct: 416 TKLNMKENKLNTLPLDIG-SWVAMVELNLGTNQLTKLPDDIQCLQSLEILILSNNGLKHI 474

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  + NL  L VL++ +N  Y++ LP  IGL+  L +L +  NK+T LP +IG LR L  
Sbjct: 475 PTTIVNLQKLRVLDLEEN--YIDVLPNEIGLMTELQKLILQSNKLTELPRTIGHLRNLTY 532

Query: 180 LSLEGNPLVSPPMDV 194
           LS+  N L   P +V
Sbjct: 533 LSVGENQLTYLPEEV 547



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 104/218 (47%), Gaps = 26/218 (11%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP+ +  +L ++  L +  N++K + N+I  L+ L +L    N ++ LP  I    +L 
Sbjct: 217 VIPD-VVYKLTSLTTLFLRFNRVKYVKNNICNLTNLTMLSFRENKIKELPAGIGELVNLL 275

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
             + + N L  LP  IG + + L TL +  N+++ LP ++ +L SL  L  R N L S+P
Sbjct: 276 TFDVSHNHLEHLPPEIG-KCVQLSTLDVQHNELLDLPDTIGNLVSLTRLGIRYNKLTSIP 334

Query: 121 EDLENLINLEVLNISQN------------FQYLETLPYSIGLLMSL-----------VEL 157
           + L N   ++  ++  N              YL T+  S  L  S              +
Sbjct: 335 KSLANCKLMDEFSVEGNQISHLPDGLLASLSYLTTITLSRNLFTSYPAGGPGQFVNAYSI 394

Query: 158 DVSYNKITTLPDSIGCLRK-LQKLSLEGNPLVSPPMDV 194
           +V +N+I  +P  I    K L KL+++ N L + P+D+
Sbjct: 395 NVEHNEIDKIPYGIFSRSKNLTKLNMKENKLNTLPLDI 432



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 32/181 (17%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LDV    ++C  + +      + LD+S   + +LP +++  + L E     NKL  LP  
Sbjct: 122 LDVGKEFIRCREDCV------RRLDLSKACITTLPSSVKELKHLREFYLYGNKLTTLPPE 175

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG+ L NL+TL+++ N                        L +LP  LENL +L VL++ 
Sbjct: 176 IGY-LSNLETLALSENS-----------------------LTNLPNTLENLKSLRVLDLR 211

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            N   L  +P  +  L SL  L + +N++  + ++I  L  L  LS   N +   P  + 
Sbjct: 212 HN--KLIVIPDVVYKLTSLTTLFLRFNRVKYVKNNICNLTNLTMLSFRENKIKELPAGIG 269

Query: 196 E 196
           E
Sbjct: 270 E 270


>gi|220907479|ref|YP_002482790.1| hypothetical protein Cyan7425_2066 [Cyanothece sp. PCC 7425]
 gi|219864090|gb|ACL44429.1| leucine-rich repeat protein [Cyanothece sp. PCC 7425]
          Length = 508

 Score =  103 bits (257), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 73/191 (38%), Positives = 111/191 (58%), Gaps = 5/191 (2%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           VL +H+N+L  LP  IGCL  LK LD+S N    LP  I N   L+ L+ + N    LP+
Sbjct: 137 VLGLHANKLTKLPAEIGCLVHLKELDLSNNAFTDLPVAIANLNQLQTLDLSRNHFTDLPE 196

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            I   L +L  L ++ NK+  +P  ++ L+ L+ LD   N +  LPE + + I L+ L++
Sbjct: 197 AIN-GLAHLCKLDLSYNKLTAIPAVISSLSQLQTLDLCANQITELPELIGSCIELQELSL 255

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           S+N   L  L  +IG L +L  LD+S N+++ LP SIG L +LQKL +E N L++ P  +
Sbjct: 256 SRNL--LINLSAAIGSLTNLKVLDLSQNQLSHLPKSIGYLTQLQKLYIERNKLITLPESI 313

Query: 195 VEQGLSAVKGY 205
              GLS ++ +
Sbjct: 314 --GGLSNLQTF 322



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/220 (36%), Positives = 114/220 (51%), Gaps = 18/220 (8%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           VLD+  NQL  LP +I CL++LK LD+S N   SLP  I +   L+ L  + NKL +LP 
Sbjct: 91  VLDLIENQLTNLPEAISCLTQLKKLDLSNNHFTSLPVVIGDLAQLQVLGLHANKLTKLPA 150

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            IG  L++LK L ++ N    LP ++ +L  L+ LD   N    LPE +  L +L  L++
Sbjct: 151 EIGC-LVHLKELDLSNNAFTDLPVAIANLNQLQTLDLSRNHFTDLPEAINGLAHLCKLDL 209

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           S N   L  +P  I  L  L  LD+  N+IT LP+ IG   +LQ+LSL  N L++     
Sbjct: 210 SYN--KLTAIPAVISSLSQLQTLDLCANQITELPELIGSCIELQELSLSRNLLIN----- 262

Query: 195 VEQGLSAVKGYLSE------KMNNDHKSPKKKSWVGKLVK 228
               LSA  G L+         N     PK   ++ +L K
Sbjct: 263 ----LSAAIGSLTNLKVLDLSQNQLSHLPKSIGYLTQLQK 298



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 105/190 (55%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE ++A L  +  LD+ SN L  LP  I  L++L+VLD+  N L +LP+ I     L++
Sbjct: 56  LPEEISA-LTQLRDLDLFSNSLSALPLGICSLTQLEVLDLIENQLTNLPEAISCLTQLKK 114

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N    LP  IG +L  L+ L ++ NK+  LP  +  L  L+ LD   N    LP 
Sbjct: 115 LDLSNNHFTSLPVVIG-DLAQLQVLGLHANKLTKLPAEIGCLVHLKELDLSNNAFTDLPV 173

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + NL  L+ L++S+N  +   LP +I  L  L +LD+SYNK+T +P  I  L +LQ L 
Sbjct: 174 AIANLNQLQTLDLSRN--HFTDLPEAINGLAHLCKLDLSYNKLTAIPAVISSLSQLQTLD 231

Query: 182 LEGNPLVSPP 191
           L  N +   P
Sbjct: 232 LCANQITELP 241



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 79/214 (36%), Positives = 116/214 (54%), Gaps = 17/214 (7%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+ VLD+  NQL  LP SIG L++L+ L +  N L +LP++I    +L+  +   N
Sbjct: 268 GSLTNLKVLDLSQNQLSHLPKSIGYLTQLQKLYIERNKLITLPESIGGLSNLQTFHLYRN 327

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED----- 122
           +L  LP++IG +LI L+ L    N++  LP ++  LT L  L+   N L +LPE      
Sbjct: 328 QLTILPESIG-DLIQLRELFAYQNQLTNLPGTIRFLTRLEKLNLSGNQLATLPEGLTVLC 386

Query: 123 --LENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L +L+ L  LN+S N   +  LP +IG L  L EL +  N +  LP SIG L +LQ L
Sbjct: 387 EALSSLLQLHYLNLSHN--QIAQLPEAIGALTQLKELVLVCNHLKDLPASIGSLTQLQFL 444

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDH 214
            +  NPL   P  +   GLS +     +K+N +H
Sbjct: 445 YVSHNPLTHLPETI--NGLSQL-----QKLNLEH 471



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 105/186 (56%), Gaps = 10/186 (5%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  N L  L  +IG L+ LKVLD+S N L  LPK+I     L++L    NKL  LP++
Sbjct: 253 LSLSRNLLINLSAAIGSLTNLKVLDLSQNQLSHLPKSIGYLTQLQKLYIERNKLITLPES 312

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L NL+T  +  N++ ILP+S+  L  LR L A  N L +LP  +  L  LE LN+S
Sbjct: 313 IG-GLSNLQTFHLYRNQLTILPESIGDLIQLRELFAYQNQLTNLPGTIRFLTRLEKLNLS 371

Query: 136 QNFQYLETLPYSIGL-------LMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
            N   L TLP  + +       L+ L  L++S+N+I  LP++IG L +L++L L  N L 
Sbjct: 372 GN--QLATLPEGLTVLCEALSSLLQLHYLNLSHNQIAQLPEAIGALTQLKELVLVCNHLK 429

Query: 189 SPPMDV 194
             P  +
Sbjct: 430 DLPASI 435



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/181 (38%), Positives = 100/181 (55%), Gaps = 11/181 (6%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPK-------TI 53
           ++PES+   L+ +  L  + NQL  LP +I  L++L+ L++SGN L +LP+        +
Sbjct: 331 ILPESI-GDLIQLRELFAYQNQLTNLPGTIRFLTRLEKLNLSGNQLATLPEGLTVLCEAL 389

Query: 54  ENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL 113
            +   L  LN + N++ QLP+ IG  L  LK L + CN +  LP S+  LT L+ L    
Sbjct: 390 SSLLQLHYLNLSHNQIAQLPEAIG-ALTQLKELVLVCNHLKDLPASIGSLTQLQFLYVSH 448

Query: 114 NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGC 173
           N L  LPE +  L  L+ LN+  N  +L  LP +I  L  L EL +S NK T LP +IG 
Sbjct: 449 NPLTHLPETINGLSQLQKLNLEHN--HLSDLPAAIAALTLLKELILSENKFTVLPTAIGA 506

Query: 174 L 174
           L
Sbjct: 507 L 507



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 114/219 (52%), Gaps = 26/219 (11%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A L  +  LD+  N    LP +I  L+ L  LD+S N L ++P  I +   L+ L+   N
Sbjct: 176 ANLNQLQTLDLSRNHFTDLPEAINGLAHLCKLDLSYNKLTAIPAVISSLSQLQTLDLCAN 235

Query: 68  KLRQLPDTIGF----------------------ELINLKTLSINCNKIVILPQSLTHLTS 105
           ++ +LP+ IG                        L NLK L ++ N++  LP+S+ +LT 
Sbjct: 236 QITELPELIGSCIELQELSLSRNLLINLSAAIGSLTNLKVLDLSQNQLSHLPKSIGYLTQ 295

Query: 106 LRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
           L+ L    N L +LPE +  L NL+  ++ +N   L  LP SIG L+ L EL    N++T
Sbjct: 296 LQKLYIERNKLITLPESIGGLSNLQTFHLYRN--QLTILPESIGDLIQLRELFAYQNQLT 353

Query: 166 TLPDSIGCLRKLQKLSLEGNPLVSPP--MDVVEQGLSAV 202
            LP +I  L +L+KL+L GN L + P  + V+ + LS++
Sbjct: 354 NLPGTIRFLTRLEKLNLSGNQLATLPEGLTVLCEALSSL 392



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 64/166 (38%), Positives = 90/166 (54%), Gaps = 3/166 (1%)

Query: 26  LPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKT 85
           LP +IG L++L+ LD+S N L +LP+ I     L +L+   N L  LP  I   L  L+ 
Sbjct: 33  LPTTIGTLTQLQKLDLSNNYLTTLPEEISALTQLRDLDLFSNSLSALPLGI-CSLTQLEV 91

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L +  N++  LP++++ LT L+ LD   N   SLP  + +L  L+VL +  N   L  LP
Sbjct: 92  LDLIENQLTNLPEAISCLTQLKKLDLSNNHFTSLPVVIGDLAQLQVLGLHAN--KLTKLP 149

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
             IG L+ L ELD+S N  T LP +I  L +LQ L L  N     P
Sbjct: 150 AEIGCLVHLKELDLSNNAFTDLPVAIANLNQLQTLDLSRNHFTDLP 195



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/126 (40%), Positives = 72/126 (57%), Gaps = 3/126 (2%)

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L +LP TIG  L  L+ L ++ N +  LP+ ++ LT LR LD   N L +LP  + +L  
Sbjct: 30  LTELPTTIG-TLTQLQKLDLSNNYLTTLPEEISALTQLRDLDLFSNSLSALPLGICSLTQ 88

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           LEVL++ +N   L  LP +I  L  L +LD+S N  T+LP  IG L +LQ L L  N L 
Sbjct: 89  LEVLDLIEN--QLTNLPEAISCLTQLKKLDLSNNHFTSLPVVIGDLAQLQVLGLHANKLT 146

Query: 189 SPPMDV 194
             P ++
Sbjct: 147 KLPAEI 152



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 2/115 (1%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           LP ++  LT L+ LD   N L +LPE++  L  L  L++  N   L  LP  I  L  L 
Sbjct: 33  LPTTIGTLTQLQKLDLSNNYLTTLPEEISALTQLRDLDLFSN--SLSALPLGICSLTQLE 90

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKM 210
            LD+  N++T LP++I CL +L+KL L  N   S P+ + +     V G  + K+
Sbjct: 91  VLDLIENQLTNLPEAISCLTQLKKLDLSNNHFTSLPVVIGDLAQLQVLGLHANKL 145



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/103 (40%), Positives = 58/103 (56%), Gaps = 2/103 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE++ A L  +  L +  N LK LP SIG L++L+ L VS N L  LP+TI     L++
Sbjct: 408 LPEAIGA-LTQLKELVLVCNHLKDLPASIGSLTQLQFLYVSHNPLTHLPETINGLSQLQK 466

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLT 104
           LN   N L  LP  I   L  LK L ++ NK  +LP ++  LT
Sbjct: 467 LNLEHNHLSDLPAAIA-ALTLLKELILSENKFTVLPTAIGALT 508


>gi|255081704|ref|XP_002508074.1| predicted protein [Micromonas sp. RCC299]
 gi|226523350|gb|ACO69332.1| predicted protein [Micromonas sp. RCC299]
          Length = 344

 Score =  103 bits (257), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 108/184 (58%), Gaps = 3/184 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++V L +  NQL  +P  IG L+ L+VLD+S N L SLP  I    +L+EL    N
Sbjct: 49  GQLTSLVKLSLTENQLTSVPAEIGQLASLRVLDLSDNQLTSLPAEIGLLTALQELYLYGN 108

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  I ++L +L+ L ++ N++  +P  +  LTSL VL    N L S+P ++  L 
Sbjct: 109 QLTSVPAEI-WQLTSLRKLLLDDNELTSVPAEIGQLTSLEVLGLTDNQLTSVPAEIGQLA 167

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L    +S N   L ++P  IGLL SL EL +S N++T++P  IG L  LQ+L L+ N L
Sbjct: 168 SLTESGLSGN--RLASVPAEIGLLASLTELFLSGNQLTSVPAEIGQLTSLQELWLDDNEL 225

Query: 188 VSPP 191
            S P
Sbjct: 226 TSVP 229



 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 98/179 (54%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L+V  N L  LP  IG L+ L  L ++ N L S+P  I    SL  L+ + N+L  LP  
Sbjct: 34  LNVSRNALTLLPVEIGQLTSLVKLSLTENQLTSVPAEIGQLASLRVLDLSDNQLTSLPAE 93

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L  L+ L +  N++  +P  +  LTSLR L    N L S+P ++  L +LEVL ++
Sbjct: 94  IGL-LTALQELYLYGNQLTSVPAEIWQLTSLRKLLLDDNELTSVPAEIGQLTSLEVLGLT 152

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L ++P  IG L SL E  +S N++ ++P  IG L  L +L L GN L S P ++
Sbjct: 153 DN--QLTSVPAEIGQLASLTESGLSGNRLASVPAEIGLLASLTELFLSGNQLTSVPAEI 209



 Score = 77.0 bits (188), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 90/179 (50%), Gaps = 26/179 (14%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           +  N+L  +P  IG L+ L  L +SGN L S+P  I    SL+EL  + N+L  +P+  G
Sbjct: 174 LSGNRLASVPAEIGLLASLTELFLSGNQLTSVPAEIGQLTSLQELWLDDNELTSVPEETG 233

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
            +L +L  LS+  N++  +P  +  LTSL+ L    N L S+P +               
Sbjct: 234 -QLASLMVLSLRDNELTSVPAEVGQLTSLKSLYLYGNQLTSVPAE--------------- 277

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
                     IG L  L EL +  N++T++P  IG LR L+KL L+ N L S P ++ E
Sbjct: 278 ----------IGQLTLLTELFLDDNELTSVPAEIGQLRSLEKLYLDDNKLTSVPAEIRE 326



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 93/177 (52%), Gaps = 11/177 (6%)

Query: 31  GCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINC 90
           G + +L + DV  +L  +LP  +    +L ELN + N L  LP  IG +L +L  LS+  
Sbjct: 5   GRVVELDLEDV--DLTAALPAELGRLSALRELNVSRNALTLLPVEIG-QLTSLVKLSLTE 61

Query: 91  NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL 150
           N++  +P  +  L SLRVLD   N L SLP ++  L  L+ L +  N   L ++P  I  
Sbjct: 62  NQLTSVPAEIGQLASLRVLDLSDNQLTSLPAEIGLLTALQELYLYGN--QLTSVPAEIWQ 119

Query: 151 LMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV------VEQGLSA 201
           L SL +L +  N++T++P  IG L  L+ L L  N L S P ++       E GLS 
Sbjct: 120 LTSLRKLLLDDNELTSVPAEIGQLTSLEVLGLTDNQLTSVPAEIGQLASLTESGLSG 176



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 58/102 (56%), Gaps = 2/102 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE  T +L +++VL +  N+L  +P  +G L+ LK L + GN L S+P  I     L E
Sbjct: 228 VPEE-TGQLASLMVLSLRDNELTSVPAEVGQLTSLKSLYLYGNQLTSVPAEIGQLTLLTE 286

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHL 103
           L  + N+L  +P  IG +L +L+ L ++ NK+  +P  +  L
Sbjct: 287 LFLDDNELTSVPAEIG-QLRSLEKLYLDDNKLTSVPAEIREL 327


>gi|418668205|ref|ZP_13229608.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756062|gb|EKR17689.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 329

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/220 (35%), Positives = 119/220 (54%), Gaps = 8/220 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + +NQ+  LP  I  L  LKVL +S N L +LPK IE  ++L+ L    N
Sbjct: 110 EQLKNLQTLYLGNNQITILPKEIRQLQNLKVLFLSNNQLTTLPKEIEQLKNLQTLYLGNN 169

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L   P  I  +L NL+ L +  N++ +LPQ +  L +L++LD   N L  LP+++E L 
Sbjct: 170 RLTTFPKEIE-QLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLTVLPKEIEQLK 228

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+  N   L  LP  I  L +L  L + YN++T LP  IG L+ L+ L L  N L
Sbjct: 229 NLQELNLGYN--QLTVLPKEIEQLKNLQTLYLGYNQLTVLPKEIGQLQNLKVLFLNNNQL 286

Query: 188 VSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
            + P  +       +K      +NN+  S ++K  + KL+
Sbjct: 287 TTLPKKI-----GQLKNLQELYLNNNQLSIEEKERIQKLI 321



 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R+L+     L +LP+++  L NL+ LN+  N   +  LP  IG L +L 
Sbjct: 36  LTKALQNPLDVRILNLSEQKLTTLPKEIGQLKNLQELNLGNN--QITILPKEIGQLQNLQ 93

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L + YN++T LP  I  L+ LQ L L  N +   P ++
Sbjct: 94  LLGLYYNQLTILPKEIEQLKNLQTLYLGNNQITILPKEI 132


>gi|417785891|ref|ZP_12433591.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409950926|gb|EKO05445.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 267

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 103/178 (57%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQ   LP  IG L KL+VL+++GN   SLPK I   ++LE L+   N
Sbjct: 60  GQLQNLERLDLDGNQFTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGN 119

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP  IG +L  L+ L+++ N+  I P+ +    SL+ L    + LK+LP+++  L 
Sbjct: 120 QFTSLPKEIG-QLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQ 178

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ L++  N   L +LP  IG L +L EL++  NK+ TLP  I  L+ LQ L L  N
Sbjct: 179 NLQSLHLDGN--QLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSN 234



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/183 (37%), Positives = 100/183 (54%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L++  NQL  LP  IG L  L+VL+++GN   SLPK I   ++LE L+ + N+   
Sbjct: 18  NLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTS 77

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L  L+ L++  N+   LP+ +  L +L  LD   N   SLP+++  L  LE 
Sbjct: 78  LPKEIG-QLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEA 136

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LN+  N       P  I    SL  L +S +++ TLP  I  L+ LQ L L+GN L S P
Sbjct: 137 LNLDHN--RFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLTSLP 194

Query: 192 MDV 194
            ++
Sbjct: 195 KEI 197



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 97/175 (55%), Gaps = 3/175 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           ++L+ LP  IG    L+ L++ GN L SLPK I   ++L  LN   N+   LP  IG +L
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG-QL 62

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            NL+ L ++ N+   LP+ +  L  LRVL+   N   SLP+++  L NLE L+++ N   
Sbjct: 63  QNLERLDLDGNQFTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGN--Q 120

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
             +LP  IG L  L  L++ +N+ T  P  I   + L+ L L G+ L + P +++
Sbjct: 121 FTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEIL 175



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 2/82 (2%)

Query: 113 LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
           L+ L+SLP  +    NLE LN+  N   L +LP  IG L +L  L+++ N+ T+LP  IG
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGN--QLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60

Query: 173 CLRKLQKLSLEGNPLVSPPMDV 194
            L+ L++L L+GN   S P ++
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEI 82


>gi|456985860|gb|EMG21570.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Copenhageni str. LT2050]
          Length = 368

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 110/194 (56%), Gaps = 4/194 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +  +L N+ +L +HSN+L  L   I  L  LK LD+S N L +LP  IE  ++L+
Sbjct: 129 VLPQEI-EQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLK 187

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L  + N+    P  IG +L NLK L +N N+I ILP  +  L  L+ L    N L +LP
Sbjct: 188 SLYLSENQFATFPKEIG-QLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLP 246

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++E L NL+ L++S N   L  LP  +G L +L  LD+  N++ TLP  I  L+ LQ L
Sbjct: 247 KEIEQLKNLQTLDLSYN--QLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTL 304

Query: 181 SLEGNPLVSPPMDV 194
            L  N L   P ++
Sbjct: 305 FLSNNQLTILPQEI 318



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/181 (39%), Positives = 105/181 (58%), Gaps = 3/181 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L +  NQ    P  IG L  LKVL ++ N +  LP  I   + L+ L  + N+
Sbjct: 182 QLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQ 241

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  I  +L NL+TL ++ N++ ILP+ +  L +L+ LD R N LK+LP+++E L N
Sbjct: 242 LITLPKEIE-QLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKN 300

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S N   L  LP  IG L +L+ L + YN++TTLP+ I  L+ LQ L L  N   
Sbjct: 301 LQTLFLSNN--QLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFS 358

Query: 189 S 189
           S
Sbjct: 359 S 359



 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +H NQL  LP  I  L  L++L +  N L +LPK IE  ++L+ L+   N
Sbjct: 66  GKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L ++ N++  L + +  L +L+ LD   N L +LP ++E L 
Sbjct: 126 QLTVLPQEIE-QLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLK 184

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +S+N     T P  IG L +L  L ++ N+IT LP+ I  L+KLQ L L  N L
Sbjct: 185 NLKSLYLSEN--QFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQL 242

Query: 188 VSPPMDV 194
           ++ P ++
Sbjct: 243 ITLPKEI 249



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 107/186 (57%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ VLD+ SNQL  LP  I  L  L++L +  N L +L K IE  ++L+ L+ + N+
Sbjct: 113 QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQ 172

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP+ I  +L NLK+L ++ N+    P+ +  L +L+VL    N +  LP ++  L  
Sbjct: 173 LTTLPNEIE-QLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKK 231

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S N   L TLP  I  L +L  LD+SYN++T LP  +G L  LQ L L  N L 
Sbjct: 232 LQYLYLSDN--QLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLK 289

Query: 189 SPPMDV 194
           + P ++
Sbjct: 290 TLPKEI 295



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 103/186 (55%), Gaps = 3/186 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V VLD+   +LK LP  IG L  L+ L +  N L  LP+ IE  ++L+ L    N+L 
Sbjct: 46  LEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLT 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  I  +L NL+ L +  N++ +LPQ +  L +L++L    N L +L +D+E L NL+
Sbjct: 106 TLPKEIE-QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLK 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++S N   L TLP  I  L +L  L +S N+  T P  IG L+ L+ L L  N +   
Sbjct: 165 SLDLSNN--QLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 191 PMDVVE 196
           P ++ +
Sbjct: 223 PNEIAK 228



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 92/161 (57%), Gaps = 4/161 (2%)

Query: 48  SLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
            L K ++N   +  L+ +  +L+ LP  IG +L NL+ L ++ N++ +LPQ +  L +L+
Sbjct: 37  DLTKALQNPLEVRVLDLSRQELKTLPIEIG-KLKNLQRLYLHYNQLTVLPQEIEQLKNLQ 95

Query: 108 VLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
           +L  R N L +LP+++E L NL+VL++  N   L  LP  I  L +L  L +  N++TTL
Sbjct: 96  LLYLRSNRLTTLPKEIEQLKNLQVLDLGSN--QLTVLPQEIEQLKNLQLLYLHSNRLTTL 153

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSE 208
              I  L+ L+ L L  N L + P + +EQ  +    YLSE
Sbjct: 154 SKDIEQLQNLKSLDLSNNQLTTLPNE-IEQLKNLKSLYLSE 193



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/130 (37%), Positives = 74/130 (56%), Gaps = 1/130 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A+L  +  L +  NQL  LP  I  L  L+ LD+S N L  LPK +    +L+ L+   N
Sbjct: 227 AKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN 286

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  I  +L NL+TL ++ N++ ILPQ +  L +L  L    N L +LP ++E L 
Sbjct: 287 QLKTLPKEIE-QLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK 345

Query: 128 NLEVLNISQN 137
           NL+ L ++ N
Sbjct: 346 NLQTLYLNNN 355


>gi|402867304|ref|XP_003897800.1| PREDICTED: leucine-rich repeat-containing protein 1 [Papio anubis]
          Length = 524

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 112/193 (58%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 120 LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 179 LDLGNNEIYNLPESIG-ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPE 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L  L ISQN   LET+P  IG L  L  L V  N++T LP+++G    L +L 
Sbjct: 238 EISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELV 295

Query: 182 LEGNPLVSPPMDV 194
           L  N L++ P  +
Sbjct: 296 LTENQLLTLPKSI 308



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 108/195 (55%), Gaps = 7/195 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   AR L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L
Sbjct: 27  VPEEIYRYARSLEELLLD--ANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N++ ++P++I F    L+    + N +  LP+S   L +L  L      L+SL
Sbjct: 85  VELDVSRNEIPEIPESISF-CKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++ NL NL  L + +N   L  LP S+  L  L ELD+  N+I  LP+SIG L  L+ 
Sbjct: 144 PENIGNLYNLASLELRENL--LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKD 201

Query: 180 LSLEGNPLVSPPMDV 194
           L L+GN L   P ++
Sbjct: 202 LWLDGNQLSELPQEI 216



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 121/250 (48%), Gaps = 32/250 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N++  +P SI     L+V D SGN L  LP++    ++L  L+ N  
Sbjct: 79  ANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDI 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD--------------ARL 113
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD              A L
Sbjct: 139 SLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALL 197

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L  LP+++ NL NL  L++S+N   LE LP  I  L SL +L +S N +
Sbjct: 198 HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN--RLERLPEEISGLTSLTDLVISQNLL 255

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVG 224
            T+PD IG L+KL  L ++ N L   P + V    S  +  L+E  N     PK    +G
Sbjct: 256 ETIPDGIGKLKKLSILKVDQNRLTQLP-EAVGDCESLTELVLTE--NQLLTLPKS---IG 309

Query: 225 KLVKYGTFNG 234
           KL K    N 
Sbjct: 310 KLKKLSNLNA 319



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 108/207 (52%), Gaps = 6/207 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+ A LL++  L +  NQL  LP  IG L  L  LDVS N LE LP+ I    SL +
Sbjct: 189 LPESIGA-LLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTD 247

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L  +PD IG +L  L  L ++ N++  LP+++    SL  L    N L +LP+
Sbjct: 248 LVISQNLLETIPDGIG-KLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPK 306

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L  L  LN  +N   L +LP  IG   SL    V  N++T +P  +    +L  L 
Sbjct: 307 SIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLD 364

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSE 208
           + GN L+  P+ +    L A+  +LS+
Sbjct: 365 VAGNRLLHLPLSLTALKLKAL--WLSD 389



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 96/176 (54%), Gaps = 4/176 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N++ LDV  N+L+ LP  I  L+ L  L +S NLLE++P  I   + L  L  + N+L
Sbjct: 219 LKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRL 278

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            QLP+ +G +  +L  L +  N+++ LP+S+  L  L  L+A  N L SLP+++    +L
Sbjct: 279 TQLPEAVG-DCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSL 337

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            V  +  N   L  +P  +     L  LDV+ N++  LP S+  L KL+ L L  N
Sbjct: 338 TVFCVRDN--RLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTAL-KLKALWLSDN 390



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 2/138 (1%)

Query: 57  RSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
           R +E ++     L  +P+ I     +L+ L ++ N++  LP+    L  LR L    N +
Sbjct: 12  RHVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + LP ++ N + L  L++S+N   +  +P SI    +L   D S N +T LP+S   L+ 
Sbjct: 72  QRLPPEIANFMQLVELDVSRN--EIPEIPESISFCKALQVADFSGNPLTRLPESFPELQN 129

Query: 177 LQKLSLEGNPLVSPPMDV 194
           L  LS+    L S P ++
Sbjct: 130 LTCLSVNDISLQSLPENI 147


>gi|418712104|ref|ZP_13272849.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791371|gb|EKR85047.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|455791547|gb|EMF43354.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 377

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/197 (37%), Positives = 111/197 (56%), Gaps = 3/197 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L +  NQ    P  IG L  LKVL ++ N +  LP  I   + L+ L  + N+
Sbjct: 182 QLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQ 241

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  I  +L NL+TL ++ N++ ILP+ +  L +L+ LD R N LK+LP+++E L N
Sbjct: 242 LITLPKEIE-QLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKN 300

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S N   L  LP  IG L +L+ L + YN++TTLP+ I  L+ LQ L L  N   
Sbjct: 301 LQTLFLSNN--QLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFS 358

Query: 189 SPPMDVVEQGLSAVKGY 205
           S   + + + L   + Y
Sbjct: 359 SQEKEKIRKLLPKCQIY 375



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +H NQL  LP  I  L  L++L +  N L +LPK IE  ++L+ L+   N
Sbjct: 66  GKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L ++ N++  L + +  L +L+ LD   N L +LP ++E L 
Sbjct: 126 QLTVLPQEIE-QLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLK 184

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +S+N     T P  IG L +L  L ++ N+IT LP+ I  L+KLQ L L  N L
Sbjct: 185 NLKSLYLSEN--QFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQL 242

Query: 188 VSPPMDV 194
           ++ P ++
Sbjct: 243 ITLPKEI 249



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 107/186 (57%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ VLD+ SNQL  LP  I  L  L++L +  N L +L K IE  ++L+ L+ + N+
Sbjct: 113 QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQ 172

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP+ I  +L NLK+L ++ N+    P+ +  L +L+VL    N +  LP ++  L  
Sbjct: 173 LTTLPNEIE-QLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKK 231

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S N   L TLP  I  L +L  LD+SYN++T LP  +G L  LQ L L  N L 
Sbjct: 232 LQYLYLSDN--QLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLK 289

Query: 189 SPPMDV 194
           + P ++
Sbjct: 290 TLPKEI 295



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 103/186 (55%), Gaps = 3/186 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V VLD+   +LK LP  IG L  L+ L +  N L  LP+ IE  ++L+ L    N+L 
Sbjct: 46  LEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLT 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  I  +L NL+ L +  N++ +LPQ +  L +L++L    N L +L +D+E L NL+
Sbjct: 106 TLPKEIE-QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLK 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++S N   L TLP  I  L +L  L +S N+  T P  IG L+ L+ L L  N +   
Sbjct: 165 SLDLSNN--QLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 191 PMDVVE 196
           P ++ +
Sbjct: 223 PNEIAK 228



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 92/161 (57%), Gaps = 4/161 (2%)

Query: 48  SLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
            L K ++N   +  L+ +  +L+ LP  IG +L NL+ L ++ N++ +LPQ +  L +L+
Sbjct: 37  DLTKALQNPLEVRVLDLSRQELKTLPIEIG-KLKNLQRLYLHYNQLTVLPQEIEQLKNLQ 95

Query: 108 VLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
           +L  R N L +LP+++E L NL+VL++  N   L  LP  I  L +L  L +  N++TTL
Sbjct: 96  LLYLRSNRLTTLPKEIEQLKNLQVLDLGSN--QLTVLPQEIEQLKNLQLLYLHSNRLTTL 153

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSE 208
              I  L+ L+ L L  N L + P + +EQ  +    YLSE
Sbjct: 154 SKDIEQLQNLKSLDLSNNQLTTLPNE-IEQLKNLKSLYLSE 193



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/130 (37%), Positives = 74/130 (56%), Gaps = 1/130 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A+L  +  L +  NQL  LP  I  L  L+ LD+S N L  LPK +    +L+ L+   N
Sbjct: 227 AKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN 286

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  I  +L NL+TL ++ N++ ILPQ +  L +L  L    N L +LP ++E L 
Sbjct: 287 QLKTLPKEIE-QLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK 345

Query: 128 NLEVLNISQN 137
           NL+ L ++ N
Sbjct: 346 NLQTLYLNNN 355


>gi|355719293|gb|AES06552.1| soc-2 suppressor of clear-like protein [Mustela putorius furo]
          Length = 582

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 112/196 (57%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+   L  +  L ++SN+L+ LP  +GCL  L  L ++ N L SLP +++N + L 
Sbjct: 114 ILPSSI-KELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALNENSLTSLPDSLDNLKKLR 172

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKLR++P  + + L +L TL +  N+I  + + + +L+ L +L  R N +K LP
Sbjct: 173 MLDLRHNKLREIPSVV-YRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLP 231

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG    +  LD+ +N++  LPD+IG L  L +L
Sbjct: 232 AEIGELCNLITLDVAHN--QLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRL 289

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N L + P  + +
Sbjct: 290 GLRYNRLSAIPRSLAK 305



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 102/185 (55%), Gaps = 12/185 (6%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  +  L+   N+L  LPD
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEVLN 133
           TIG  L +L  L +  N++  +P+SL   ++L  L+   N + +LPE  L +L+ L  L 
Sbjct: 279 TIG-NLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISALPESLLSSLVKLNSLT 337

Query: 134 ISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNPLV 188
           +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N L 
Sbjct: 338 LARNCFQL-----YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLT 392

Query: 189 SPPMD 193
           S P+D
Sbjct: 393 SLPLD 397



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 99/180 (55%), Gaps = 3/180 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N + LD+    +  LP+SI  L++L  L +  N L+SLP  +    +L  L  N N L  
Sbjct: 101 NSMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALNENSLTS 160

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LPD++   L  L+ L +  NK+  +P  +  L SL  L  R N + ++ +D++NL  L +
Sbjct: 161 LPDSLD-NLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSM 219

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L+I +N   ++ LP  IG L +L+ LDV++N++  LP  IG   ++  L L+ N L+  P
Sbjct: 220 LSIREN--KIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLP 277



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 2/160 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           ++V L++ +NQL  +P  +  L  L+VL +S NLL+ LP  + N R L EL+   NKL  
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ I + L +L+ L +  N++  LP+ + HLT+L  L    N L  LPE++  L NLE 
Sbjct: 463 LPNEIAY-LKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEE 521

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           L ++ N   L +LP+ + L   L  + +    ++ LP  I
Sbjct: 522 LYLNDN-PNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 560



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 8/177 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 357 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  L +L  LR LD   N L+SLP ++  L +L
Sbjct: 415 TKIPEDVSG-LVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           + L ++ N   L TLP  IG L +L  L +  N +T LP+ IG L  L++L L  NP
Sbjct: 474 QKLVLTNN--QLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNP 528



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N+L  LP++IG LS L  L +  N L ++P+++  C +LEELN   N +  L
Sbjct: 263 ITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISAL 322

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+++   L+ L +L++  NC                                        
Sbjct: 323 PESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLS 382

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N L  +PED+  L++LEVL +S N   L+ L
Sbjct: 383 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKL 440

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ +G L  L ELD+  NK+ +LP+ I  L+ LQKL L  N L + P  +
Sbjct: 441 PHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 97/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +PESL + L+ +  L +  N  +  P       S +  L++  N +  +P  I    + L
Sbjct: 322 LPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL 381

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP   G    ++  L++  N++  +P+ ++ L SL VL    N LK L
Sbjct: 382 SKLNMKDNQLTSLPLDFG-TWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  L NL  L  L++ +N   LE+LP  I  L  L +L ++ N++TTLP  IG L  L  
Sbjct: 441 PHGLGNLRKLRELDLEEN--KLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTH 498

Query: 180 LSLEGNPLVSPPMDV 194
           L L  N L   P ++
Sbjct: 499 LGLGENLLTHLPEEI 513


>gi|157135396|ref|XP_001656638.1| mitotic protein phosphatase 1 regulator, putative [Aedes aegypti]
 gi|108881267|gb|EAT45492.1| AAEL003228-PA [Aedes aegypti]
          Length = 608

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 113/204 (55%), Gaps = 5/204 (2%)

Query: 7   TARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANF 66
            + L+ + VLD+  N L  LP  IG L +L+ L ++ N L  LP  I N R+L +++   
Sbjct: 177 VSDLIMLEVLDISFNSLNSLPGGIGFLVRLQQLTLNNNRLIELPNDIVNLRNLHKMDLAK 236

Query: 67  NKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDL-EN 125
           N L+QLP  +G EL  L+ L +  N +V LP   T   +L+ +    N +KS+P D  EN
Sbjct: 237 NDLKQLPPVMG-ELRKLECLYVQHNDVVELP-DFTGCDALKEIHISNNFIKSIPADFCEN 294

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L  L+VL++  N   +E LP  I +L SL  LD+S N I++LP  +  L  L  L +EGN
Sbjct: 295 LPQLKVLDLRDN--KIEKLPDEISMLASLTRLDLSNNSISSLPSCLSTLAHLVSLQVEGN 352

Query: 186 PLVSPPMDVVEQGLSAVKGYLSEK 209
           P+ S   D+++ G   +   L E+
Sbjct: 353 PIRSIRRDIIQCGTQRILKTLRER 376



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 26/212 (12%)

Query: 2   IPES--LTARLLNVVVLDVHSNQLKCLPNSIGCLS-KLKVLDVSGNLLESLPKTIENCRS 58
           +PE   L A   +V  +D+  N+L  +P+ I  L+ +L  L++S NLL+++P        
Sbjct: 418 VPEQVFLDAAEASVYNVDISKNKLGEVPSGITHLADQLTELNISFNLLKTIPMFFSRFER 477

Query: 59  LEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKS 118
           +  LN + N L  LP+ +G  L+ L+ L++  N++  +P S+  L  L +L AR N    
Sbjct: 478 ISYLNISNNLLADLPEVVGL-LVTLRELNVANNQLKRIPPSVYELKGLEILLARDN---- 532

Query: 119 LPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQ 178
                               + ++     +  L  L  LD++ N I  +P  +G L+ + 
Sbjct: 533 ------------------KIEEIDATESGLAALPRLATLDLANNNIKQVPPVLGLLKNIT 574

Query: 179 KLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKM 210
            L L GN    P   ++E+G  ++  YL +++
Sbjct: 575 TLELIGNGFRQPRHQILEKGTESIMAYLRDRI 606



 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 99/236 (41%), Gaps = 43/236 (18%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP      L  + VLD+  N+++ LP+ I  L+ L  LD+S N + SLP  +     L  
Sbjct: 287 IPADFCENLPQLKVLDLRDNKIEKLPDEISMLASLTRLDLSNNSISSLPSCLSTLAHLVS 346

Query: 62  LNANFNKLRQL--------------------------PDTIG-----------FELINLK 84
           L    N +R +                          P+ +            +++   +
Sbjct: 347 LQVEGNPIRSIRRDIIQCGTQRILKTLRERDGPGKGGPENVKAPFEESTFPDVYQMKKGR 406

Query: 85  TLSINCNKIVILPQSL---THLTSLRVLDARLNCLKSLPEDLENLIN-LEVLNISQNFQY 140
           ++ ++   ++ +P+ +       S+  +D   N L  +P  + +L + L  LNIS  F  
Sbjct: 407 SMIVSNKNLIDVPEQVFLDAAEASVYNVDISKNKLGEVPSGITHLADQLTELNIS--FNL 464

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           L+T+P        +  L++S N +  LP+ +G L  L++L++  N L   P  V E
Sbjct: 465 LKTIPMFFSRFERISYLNISNNLLADLPEVVGLLVTLRELNVANNQLKRIPPSVYE 520



 Score = 37.0 bits (84), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 25/99 (25%)

Query: 98  QSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVEL 157
           +S  +  +L  LD   N L  + E+++NL +L VLN+  N                    
Sbjct: 83  ESWWNQKTLTNLDLSSNALTCISENVKNLGDLTVLNLQDN-------------------- 122

Query: 158 DVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
                 +T+LPD IGCL KL K+++  N L   P    E
Sbjct: 123 -----ALTSLPDGIGCLTKLTKINISRNKLTELPESFFE 156


>gi|67970427|dbj|BAE01556.1| unnamed protein product [Macaca fascicularis]
          Length = 518

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 112/193 (58%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 120 LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 179 LDLGNNEIYNLPESIG-ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPE 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L  L ISQN   LET+P  IG L  L  L V  N++T LP+++G    L +L 
Sbjct: 238 EISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELV 295

Query: 182 LEGNPLVSPPMDV 194
           L  N L++ P  +
Sbjct: 296 LTENQLLTLPKSI 308



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 108/195 (55%), Gaps = 7/195 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   AR L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L
Sbjct: 27  VPEEIYRYARSLEELLLD--ANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N++ ++P++I F    L+    + N +  LP+S   L +L  L      L+SL
Sbjct: 85  VELDVSRNEIPEIPESISF-CKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++ NL NL  L + +N   L  LP S+  L  L ELD+  N+I  LP+SIG L  L+ 
Sbjct: 144 PENIGNLYNLASLELRENL--LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKD 201

Query: 180 LSLEGNPLVSPPMDV 194
           L L+GN L   P ++
Sbjct: 202 LWLDGNQLSELPQEI 216



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 121/250 (48%), Gaps = 32/250 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N++  +P SI     L+V D SGN L  LP++    ++L  L+ N  
Sbjct: 79  ANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDI 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD--------------ARL 113
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD              A L
Sbjct: 139 SLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALL 197

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L  LP+++ NL NL  L++S+N   LE LP  I  L SL +L +S N +
Sbjct: 198 HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN--RLERLPEEISGLTSLTDLVISQNLL 255

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVG 224
            T+PD IG L+KL  L ++ N L   P + V    S  +  L+E  N     PK    +G
Sbjct: 256 ETIPDGIGKLKKLSILKVDQNRLTQLP-EAVGDCESLTELVLTE--NQLLTLPKS---IG 309

Query: 225 KLVKYGTFNG 234
           KL K    N 
Sbjct: 310 KLKKLSNLNA 319



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 108/207 (52%), Gaps = 6/207 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+ A LL++  L +  NQL  LP  IG L  L  LDVS N LE LP+ I    SL +
Sbjct: 189 LPESIGA-LLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTD 247

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L  +PD IG +L  L  L ++ N++  LP+++    SL  L    N L +LP+
Sbjct: 248 LVISQNLLETIPDGIG-KLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPK 306

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L  L  LN  +N   L +LP  IG   SL    V  N++T +P  +    +L  L 
Sbjct: 307 SIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLD 364

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSE 208
           + GN L+  P+ +    L A+  +LS+
Sbjct: 365 VAGNRLLHLPLSLTALKLKAL--WLSD 389



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 96/176 (54%), Gaps = 4/176 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N++ LDV  N+L+ LP  I  L+ L  L +S NLLE++P  I   + L  L  + N+L
Sbjct: 219 LKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRL 278

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            QLP+ +G +  +L  L +  N+++ LP+S+  L  L  L+A  N L SLP+++    +L
Sbjct: 279 TQLPEAVG-DCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSL 337

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            V  +  N   L  +P  +     L  LDV+ N++  LP S+  L KL+ L L  N
Sbjct: 338 TVFCVRDN--RLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTAL-KLKALWLSDN 390



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 2/138 (1%)

Query: 57  RSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
           R +E ++     L  +P+ I     +L+ L ++ N++  LP+    L  LR L    N +
Sbjct: 12  RHVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + LP ++ N + L  L++S+N   +  +P SI    +L   D S N +T LP+S   L+ 
Sbjct: 72  QRLPPEIANFMQLVELDVSRN--EIPEIPESISFCKALQVADFSGNPLTRLPESFPELQN 129

Query: 177 LQKLSLEGNPLVSPPMDV 194
           L  LS+    L S P ++
Sbjct: 130 LTCLSVNDISLQSLPENI 147


>gi|322784971|gb|EFZ11742.1| hypothetical protein SINV_11435 [Solenopsis invicta]
          Length = 580

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/174 (38%), Positives = 102/174 (58%), Gaps = 3/174 (1%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           ++ N+L  LP  IG LS L+ L +S N L SLP T++N + L  L+   NKL ++PD + 
Sbjct: 129 LYGNKLVTLPPEIGYLSNLETLALSENALTSLPNTLDNLKLLRVLDLRHNKLTEIPDVV- 187

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
           + L +L TL +  N++  +  ++ +LT L +L  R N +K LP  +  L+NL   ++S N
Sbjct: 188 YRLTSLTTLYLRFNRLKYVSDNICNLTRLTMLSFRENKIKELPAGIGELVNLVTFDVSHN 247

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
             +LE LP  IG  + L  LDV +N++  LPD+IG L  L +L L  N L + P
Sbjct: 248 --HLEHLPVEIGKCVQLSSLDVQHNELLDLPDTIGNLVALTRLGLRYNRLTNIP 299



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 93/182 (51%), Gaps = 3/182 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+  L +  N L  LPN++  L  L+VLD+  N L  +P  +    SL  L   FN+L
Sbjct: 144 LSNLETLALSENALTSLPNTLDNLKLLRVLDLRHNKLTEIPDVVYRLTSLTTLYLRFNRL 203

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           + + D I   L  L  LS   NKI  LP  +  L +L   D   N L+ LP ++   + L
Sbjct: 204 KYVSDNI-CNLTRLTMLSFRENKIKELPAGIGELVNLVTFDVSHNHLEHLPVEIGKCVQL 262

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
             L++  N   L  LP +IG L++L  L + YN++T +P S+   R + + S+EGN +  
Sbjct: 263 SSLDVQHN--ELLDLPDTIGNLVALTRLGLRYNRLTNIPKSLANCRMMDEFSVEGNQVSH 320

Query: 190 PP 191
            P
Sbjct: 321 LP 322



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 25/196 (12%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           + +V L++ +NQL  LP+ I CL  L+VL +S NLL+ +P T+ N   L  L+   N++ 
Sbjct: 401 VTMVELNLGTNQLMKLPDDIQCLQSLEVLILSNNLLKRIPTTMVNLHKLRVLDLEENRID 460

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ IG  +  L+ L +  N+I +LP+S+ HL +L  L    N L  LPE++  L +LE
Sbjct: 461 MLPNDIGL-MTELQKLILQSNQITVLPRSIGHLKNLTYLSVGENNLSCLPEEVGTLDSLE 519

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L ++ N   L  LP+ + L                      C + L  +S+E  PL   
Sbjct: 520 SLYLNDNPN-LHNLPFELAL----------------------C-KNLGIMSIENCPLSHI 555

Query: 191 PMDVVEQGLSAVKGYL 206
           P ++V  G S V  +L
Sbjct: 556 PAEIVAGGPSLVVQFL 571



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 99/185 (53%), Gaps = 4/185 (2%)

Query: 3   PESLTARLLNVVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEE 61
           P    A+ +N   ++V  NQ+  +P  I   S+ L  L++  NLL +LP  I +  ++ E
Sbjct: 346 PAGGPAQFVNAYSINVEHNQIDKIPYGIFSRSRNLTKLNMKENLLNALPLDIGSWVTMVE 405

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N+L +LPD I   L +L+ L ++ N +  +P ++ +L  LRVLD   N +  LP 
Sbjct: 406 LNLGTNQLMKLPDDIQC-LQSLEVLILSNNLLKRIPTTMVNLHKLRVLDLEENRIDMLPN 464

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           D+  +  L+ L +  N   +  LP SIG L +L  L V  N ++ LP+ +G L  L+ L 
Sbjct: 465 DIGLMTELQKLILQSN--QITVLPRSIGHLKNLTYLSVGENNLSCLPEEVGTLDSLESLY 522

Query: 182 LEGNP 186
           L  NP
Sbjct: 523 LNDNP 527



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 94/182 (51%), Gaps = 4/182 (2%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LDV  N+L  LP++IG L  L  L +  N L ++PK++ NCR ++E +   N++  LPD 
Sbjct: 265 LDVQHNELLDLPDTIGNLVALTRLGLRYNRLTNIPKSLANCRMMDEFSVEGNQVSHLPDG 324

Query: 76  IGFELINLKTLSINCNKIVILPQ-SLTHLTSLRVLDARLNCLKSLPEDL-ENLINLEVLN 133
           +   L  L T++++ N     P        +   ++   N +  +P  +     NL  LN
Sbjct: 325 LLASLSCLTTITLSRNNFTSYPAGGPAQFVNAYSINVEHNQIDKIPYGIFSRSRNLTKLN 384

Query: 134 ISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMD 193
           + +N   L  LP  IG  +++VEL++  N++  LPD I CL+ L+ L L  N L   P  
Sbjct: 385 MKENL--LNALPLDIGSWVTMVELNLGTNQLMKLPDDIQCLQSLEVLILSNNLLKRIPTT 442

Query: 194 VV 195
           +V
Sbjct: 443 MV 444



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 74/143 (51%), Gaps = 5/143 (3%)

Query: 54  ENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL 113
           ENC  ++ L+ +   +  LP ++  EL +L+   +  NK+V LP  + +L++L  L    
Sbjct: 98  ENC--VKRLDLSKASITILPSSVK-ELKHLREFYLYGNKLVTLPPEIGYLSNLETLALSE 154

Query: 114 NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGC 173
           N L SLP  L+NL  L VL++  N   L  +P  +  L SL  L + +N++  + D+I  
Sbjct: 155 NALTSLPNTLDNLKLLRVLDLRHN--KLTEIPDVVYRLTSLTTLYLRFNRLKYVSDNICN 212

Query: 174 LRKLQKLSLEGNPLVSPPMDVVE 196
           L +L  LS   N +   P  + E
Sbjct: 213 LTRLTMLSFRENKIKELPAGIGE 235



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 105/221 (47%), Gaps = 34/221 (15%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  RL ++  L +  N+LK + ++I  L++L +L    N ++ LP  I    +L  
Sbjct: 183 IPD-VVYRLTSLTTLYLRFNRLKYVSDNICNLTRLTMLSFRENKIKELPAGIGELVNLVT 241

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
            + + N L  LP  IG + + L +L +  N+++ LP ++ +L +L  L  R N L ++P+
Sbjct: 242 FDVSHNHLEHLPVEIG-KCVQLSSLDVQHNELLDLPDTIGNLVALTRLGLRYNRLTNIPK 300

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSL--------------------------- 154
            L N   ++  ++  N   +  LP   GLL SL                           
Sbjct: 301 SLANCRMMDEFSVEGN--QVSHLPD--GLLASLSCLTTITLSRNNFTSYPAGGPAQFVNA 356

Query: 155 VELDVSYNKITTLPDSIGCL-RKLQKLSLEGNPLVSPPMDV 194
             ++V +N+I  +P  I    R L KL+++ N L + P+D+
Sbjct: 357 YSINVEHNQIDKIPYGIFSRSRNLTKLNMKENLLNALPLDI 397


>gi|418701730|ref|ZP_13262652.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759294|gb|EKR25509.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 377

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/197 (37%), Positives = 112/197 (56%), Gaps = 3/197 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L +  NQ    P  IG L  LKVL ++ N +  LP  I   + L+ L  + N+
Sbjct: 182 QLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQ 241

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  I  +L NLK+L ++ N++ ILP+ +  L +L+ LD R N LK+LP+++E L N
Sbjct: 242 LITLPKEIE-QLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKN 300

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S N   L  LP  IG L +L+ L + YN++TTLP+ I  L+ LQ L+L  N   
Sbjct: 301 LQTLFLSNN--QLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLNLWNNQFS 358

Query: 189 SPPMDVVEQGLSAVKGY 205
           S   + + + L   + Y
Sbjct: 359 SQEKEKIRKLLPKCQIY 375



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/186 (38%), Positives = 107/186 (57%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ VLD+ SNQL  LP  I  L  L++L +  N L +L K IE  ++L+ LN + N+
Sbjct: 113 QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLNLSNNQ 172

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP+ I  +L NLK+L ++ N+    P+ +  L +L+VL    N +  LP ++  L  
Sbjct: 173 LTTLPNEIE-QLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKK 231

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S N   L TLP  I  L +L  LD+SYN++T LP  +G L  LQ L L  N L 
Sbjct: 232 LQYLYLSDN--QLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLK 289

Query: 189 SPPMDV 194
           + P ++
Sbjct: 290 TLPKEI 295



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 107/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +H NQL  LP  I  L  L++L +  N L +LP  IE  ++L+ L+   N
Sbjct: 66  GQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L ++ N++  L + +  L +L+ L+   N L +LP ++E L 
Sbjct: 126 QLTVLPQEIE-QLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLNLSNNQLTTLPNEIEQLK 184

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +S+N     T P  IG L +L  L ++ N+IT LP+ I  L+KLQ L L  N L
Sbjct: 185 NLKSLYLSEN--QFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQL 242

Query: 188 VSPPMDV 194
           ++ P ++
Sbjct: 243 ITLPKEI 249



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 103/186 (55%), Gaps = 3/186 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V VL +   +LK LP  IG L  L+ L +  N L  LP+ IE  ++L+ L    N+L 
Sbjct: 46  LEVRVLILSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLT 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ I  +L NL+ L +  N++ +LPQ +  L +L++L    N L +L +D+E L NL+
Sbjct: 106 TLPNEIE-QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLK 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+S N   L TLP  I  L +L  L +S N+  T P  IG L+ L+ L L  N +   
Sbjct: 165 SLNLSNN--QLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 191 PMDVVE 196
           P ++ +
Sbjct: 223 PNEIAK 228



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/162 (35%), Positives = 92/162 (56%), Gaps = 4/162 (2%)

Query: 47  ESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSL 106
           + L K ++N   +  L  +  +L+ LP  IG +L NL+ L ++ N++ +LPQ +  L +L
Sbjct: 36  QDLTKALQNPLEVRVLILSRQELKTLPIEIG-QLKNLQRLYLHYNQLTVLPQEIEQLKNL 94

Query: 107 RVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITT 166
           ++L  R N L +LP ++E L NL+VL++  N   L  LP  I  L +L  L +  N++TT
Sbjct: 95  QLLYLRSNRLTTLPNEIEQLKNLQVLDLGSN--QLTVLPQEIEQLKNLQLLYLHSNRLTT 152

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSE 208
           L   I  L+ L+ L+L  N L + P + +EQ  +    YLSE
Sbjct: 153 LSKDIEQLQNLKSLNLSNNQLTTLPNE-IEQLKNLKSLYLSE 193


>gi|323453411|gb|EGB09283.1| hypothetical protein AURANDRAFT_24947, partial [Aureococcus
           anophagefferens]
          Length = 318

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/184 (40%), Positives = 101/184 (54%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L ++V L++H+N LK LP S G L+ L  L +  N L SLP++  +   L  
Sbjct: 139 LPESF-GELESLVTLNLHTNALKSLPESFGDLAILVTLYLHENALASLPESFGDLERLTT 197

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N L  LP++ G +L +L TL +N N +  LP+S   L SL  LD   N L SLPE
Sbjct: 198 LNLYNNALASLPESFG-DLASLVTLYLNDNALASLPESFGGLESLEHLDLNDNALASLPE 256

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
               L +L  L +  N   L +LP S G L SLV L++  N +T+LP+S G L  L  L 
Sbjct: 257 SFGGLASLVTLYLRNN--ALASLPESFGDLSSLVTLELRNNTLTSLPESFGGLESLVTLY 314

Query: 182 LEGN 185
           L  N
Sbjct: 315 LNDN 318



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 103/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L ++  L +++N L  LP S G LS L  L + GN L SLP++  +  SL  
Sbjct: 70  LPESF-GGLASLEYLMLYNNALASLPESFGGLSSLVELRLGGNALASLPESFGDLASLVT 128

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L  LP++ G EL +L TL+++ N +  LP+S   L  L  L    N L SLPE
Sbjct: 129 LYLHNNALASLPESFG-ELESLVTLNLHTNALKSLPESFGDLAILVTLYLHENALASLPE 187

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
              +L  L  LN+  N   L +LP S G L SLV L ++ N + +LP+S G L  L+ L 
Sbjct: 188 SFGDLERLTTLNLYNN--ALASLPESFGDLASLVTLYLNDNALASLPESFGGLESLEHLD 245

Query: 182 LEGNPLVSPP 191
           L  N L S P
Sbjct: 246 LNDNALASLP 255



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/190 (38%), Positives = 102/190 (53%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L ++V L +H+N L  LP S G L  L  L++  N L+SLP++  +   L  
Sbjct: 116 LPESF-GDLASLVTLYLHNNALASLPESFGELESLVTLNLHTNALKSLPESFGDLAILVT 174

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L  LP++ G +L  L TL++  N +  LP+S   L SL  L    N L SLPE
Sbjct: 175 LYLHENALASLPESFG-DLERLTTLNLYNNALASLPESFGDLASLVTLYLNDNALASLPE 233

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
               L +LE L+++ N   L +LP S G L SLV L +  N + +LP+S G L  L  L 
Sbjct: 234 SFGGLESLEHLDLNDN--ALASLPESFGGLASLVTLYLRNNALASLPESFGDLSSLVTLE 291

Query: 182 LEGNPLVSPP 191
           L  N L S P
Sbjct: 292 LRNNTLTSLP 301



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 101/190 (53%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L ++V L +  N L  LP S G L+ L  L +  N L SLP++     SL  
Sbjct: 93  LPESF-GGLSSLVELRLGGNALASLPESFGDLASLVTLYLHNNALASLPESFGELESLVT 151

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L+ LP++ G +L  L TL ++ N +  LP+S   L  L  L+   N L SLPE
Sbjct: 152 LNLHTNALKSLPESFG-DLAILVTLYLHENALASLPESFGDLERLTTLNLYNNALASLPE 210

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
              +L +L  L ++ N   L +LP S G L SL  LD++ N + +LP+S G L  L  L 
Sbjct: 211 SFGDLASLVTLYLNDN--ALASLPESFGGLESLEHLDLNDNALASLPESFGGLASLVTLY 268

Query: 182 LEGNPLVSPP 191
           L  N L S P
Sbjct: 269 LRNNALASLP 278



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 101/190 (53%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L ++V L++++N L  LP S G L+ L  L ++ N L SLP++     SLE 
Sbjct: 24  LPESF-GGLASLVELNLYNNALASLPESFGDLASLVTLFLNDNALASLPESFGGLASLEY 82

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N L  LP++ G  L +L  L +  N +  LP+S   L SL  L    N L SLPE
Sbjct: 83  LMLYNNALASLPESFG-GLSSLVELRLGGNALASLPESFGDLASLVTLYLHNNALASLPE 141

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
               L +L  LN+  N   L++LP S G L  LV L +  N + +LP+S G L +L  L+
Sbjct: 142 SFGELESLVTLNLHTN--ALKSLPESFGDLAILVTLYLHENALASLPESFGDLERLTTLN 199

Query: 182 LEGNPLVSPP 191
           L  N L S P
Sbjct: 200 LYNNALASLP 209



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 100/190 (52%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L  +  L++ ++ L  LP S G L+ L  L++  N L SLP++  +  SL  
Sbjct: 1   LPESF-GGLERLTTLNLGNHALTSLPESFGGLASLVELNLYNNALASLPESFGDLASLVT 59

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  N N L  LP++ G  L +L+ L +  N +  LP+S   L+SL  L    N L SLPE
Sbjct: 60  LFLNDNALASLPESFG-GLASLEYLMLYNNALASLPESFGGLSSLVELRLGGNALASLPE 118

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
              +L +L  L +  N   L +LP S G L SLV L++  N + +LP+S G L  L  L 
Sbjct: 119 SFGDLASLVTLYLHNN--ALASLPESFGELESLVTLNLHTNALKSLPESFGDLAILVTLY 176

Query: 182 LEGNPLVSPP 191
           L  N L S P
Sbjct: 177 LHENALASLP 186


>gi|388452646|ref|NP_001253435.1| leucine-rich repeat-containing protein 1 [Macaca mulatta]
 gi|380784439|gb|AFE64095.1| leucine-rich repeat-containing protein 1 [Macaca mulatta]
          Length = 524

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 112/193 (58%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 120 LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 179 LDLGNNEIYNLPESIG-ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPE 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L  L ISQN   LET+P  IG L  L  L V  N++T LP+++G    L +L 
Sbjct: 238 EISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELV 295

Query: 182 LEGNPLVSPPMDV 194
           L  N L++ P  +
Sbjct: 296 LTENQLLTLPKSI 308



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 108/195 (55%), Gaps = 7/195 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   AR L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L
Sbjct: 27  VPEEIYRYARSLEELLLD--ANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N++ ++P++I F    L+    + N +  LP+S   L +L  L      L+SL
Sbjct: 85  VELDVSRNEIPEIPESISF-CKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++ NL NL  L + +N   L  LP S+  L  L ELD+  N+I  LP+SIG L  L+ 
Sbjct: 144 PENIGNLYNLASLELRENL--LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKD 201

Query: 180 LSLEGNPLVSPPMDV 194
           L L+GN L   P ++
Sbjct: 202 LWLDGNQLSELPQEI 216



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 121/250 (48%), Gaps = 32/250 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N++  +P SI     L+V D SGN L  LP++    ++L  L+ N  
Sbjct: 79  ANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDI 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD--------------ARL 113
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD              A L
Sbjct: 139 SLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALL 197

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L  LP+++ NL NL  L++S+N   LE LP  I  L SL +L +S N +
Sbjct: 198 HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN--RLERLPEEISGLTSLTDLVISQNLL 255

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVG 224
            T+PD IG L+KL  L ++ N L   P + V    S  +  L+E  N     PK    +G
Sbjct: 256 ETIPDGIGKLKKLSILKVDQNRLTQLP-EAVGDCESLTELVLTE--NQLLTLPKS---IG 309

Query: 225 KLVKYGTFNG 234
           KL K    N 
Sbjct: 310 KLKKLSNLNA 319



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 108/207 (52%), Gaps = 6/207 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+ A LL++  L +  NQL  LP  IG L  L  LDVS N LE LP+ I    SL +
Sbjct: 189 LPESIGA-LLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTD 247

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L  +PD IG +L  L  L ++ N++  LP+++    SL  L    N L +LP+
Sbjct: 248 LVISQNLLETIPDGIG-KLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPK 306

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L  L  LN  +N   L +LP  IG   SL    V  N++T +P  +    +L  L 
Sbjct: 307 SIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLD 364

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSE 208
           + GN L+  P+ +    L A+  +LS+
Sbjct: 365 VAGNRLLHLPLSLTALKLKAL--WLSD 389



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 96/176 (54%), Gaps = 4/176 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N++ LDV  N+L+ LP  I  L+ L  L +S NLLE++P  I   + L  L  + N+L
Sbjct: 219 LKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRL 278

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            QLP+ +G +  +L  L +  N+++ LP+S+  L  L  L+A  N L SLP+++    +L
Sbjct: 279 TQLPEAVG-DCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSL 337

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            V  +  N   L  +P  +     L  LDV+ N++  LP S+  L KL+ L L  N
Sbjct: 338 TVFCVRDN--RLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTAL-KLKALWLSDN 390



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 2/138 (1%)

Query: 57  RSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
           R +E ++     L  +P+ I     +L+ L ++ N++  LP+    L  LR L    N +
Sbjct: 12  RHVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + LP ++ N + L  L++S+N   +  +P SI    +L   D S N +T LP+S   L+ 
Sbjct: 72  QRLPPEIANFMQLVELDVSRN--EIPEIPESISFCKALQVADFSGNPLTRLPESFPELQN 129

Query: 177 LQKLSLEGNPLVSPPMDV 194
           L  LS+    L S P ++
Sbjct: 130 LTCLSVNDISLQSLPENI 147


>gi|73998572|ref|XP_535013.2| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Canis
           lupus familiaris]
 gi|301755536|ref|XP_002913604.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Ailuropoda
           melanoleuca]
 gi|410976089|ref|XP_003994458.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Felis
           catus]
 gi|281347753|gb|EFB23337.1| hypothetical protein PANDA_001424 [Ailuropoda melanoleuca]
          Length = 582

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 112/196 (57%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+   L  +  L ++SN+L+ LP  +GCL  L  L ++ N L SLP +++N + L 
Sbjct: 114 ILPSSI-KELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALNENSLTSLPDSLDNLKKLR 172

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKLR++P  + + L +L TL +  N+I  + + + +L+ L +L  R N +K LP
Sbjct: 173 MLDLRHNKLREIPSVV-YRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLP 231

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG    +  LD+ +N++  LPD+IG L  L +L
Sbjct: 232 AEIGELCNLITLDVAHN--QLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRL 289

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N L + P  + +
Sbjct: 290 GLRYNRLSAIPRSLAK 305



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 102/185 (55%), Gaps = 12/185 (6%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  +  L+   N+L  LPD
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEVLN 133
           TIG  L +L  L +  N++  +P+SL   ++L  L+   N + +LPE  L +L+ L  L 
Sbjct: 279 TIG-NLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISALPESLLSSLVKLNSLT 337

Query: 134 ISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNPLV 188
           +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N L 
Sbjct: 338 LARNCFQL-----YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLT 392

Query: 189 SPPMD 193
           S P+D
Sbjct: 393 SLPLD 397



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 99/180 (55%), Gaps = 3/180 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N + LD+    +  LP+SI  L++L  L +  N L+SLP  +    +L  L  N N L  
Sbjct: 101 NSMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALNENSLTS 160

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LPD++   L  L+ L +  NK+  +P  +  L SL  L  R N + ++ +D++NL  L +
Sbjct: 161 LPDSLD-NLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSM 219

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L+I +N   ++ LP  IG L +L+ LDV++N++  LP  IG   ++  L L+ N L+  P
Sbjct: 220 LSIREN--KIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLP 277



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 2/160 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           ++V L++ +NQL  +P  +  L  L+VL +S NLL+ LP  + N R L EL+   NKL  
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ I + L +L+ L +  N++  LP+ + HLT+L  L    N L  LPE++  L NLE 
Sbjct: 463 LPNEIAY-LKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEE 521

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           L ++ N   L +LP+ + L   L  + +    ++ LP  I
Sbjct: 522 LYLNDN-PNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 560



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 8/177 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 357 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  L +L  LR LD   N L+SLP ++  L +L
Sbjct: 415 TKIPEDVSG-LVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           + L ++ N   L TLP  IG L +L  L +  N +T LP+ IG L  L++L L  NP
Sbjct: 474 QKLVLTNN--QLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNP 528



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N+L  LP++IG LS L  L +  N L ++P+++  C +LEELN   N +  L
Sbjct: 263 ITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISAL 322

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+++   L+ L +L++  NC                                        
Sbjct: 323 PESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLS 382

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N L  +PED+  L++LEVL +S N   L+ L
Sbjct: 383 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKL 440

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ +G L  L ELD+  NK+ +LP+ I  L+ LQKL L  N L + P  +
Sbjct: 441 PHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 97/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +PESL + L+ +  L +  N  +  P       S +  L++  N +  +P  I    + L
Sbjct: 322 LPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL 381

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP   G    ++  L++  N++  +P+ ++ L SL VL    N LK L
Sbjct: 382 SKLNMKDNQLTSLPLDFG-TWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  L NL  L  L++ +N   LE+LP  I  L  L +L ++ N++TTLP  IG L  L  
Sbjct: 441 PHGLGNLRKLRELDLEEN--KLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTH 498

Query: 180 LSLEGNPLVSPPMDV 194
           L L  N L   P ++
Sbjct: 499 LGLGENLLTHLPEEI 513


>gi|146328669|ref|YP_001208947.1| leucine rich repeat domain-containing protein [Dichelobacter
           nodosus VCS1703A]
 gi|146232139|gb|ABQ13117.1| Leucine Rich Repeat domain protein [Dichelobacter nodosus VCS1703A]
          Length = 460

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 112/193 (58%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  +L N   L +  NQL+ LP S+G L +L+ L   G + + LP++I N   L  
Sbjct: 184 LPEEL-GQLKNCRSLLLDCNQLQQLPESLGALEQLQFLTFRGGMFQKLPESIGNLVQLHT 242

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+A+   + +LP TIG +LI L+ L ++ N++ +LP  +  L  L+ L    N LK LP 
Sbjct: 243 LSASHTLISRLPSTIG-QLIYLQELDLSSNQLEVLPPEIGKLKQLKKLHLNNNVLKVLPP 301

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++ +LINLE L I  N  +L  LP +IG L  L EL +  N++ +LP+ IG L+ LQ L 
Sbjct: 302 EIGHLINLESLQIWSN--HLIALPATIGQLKKLAELHLKNNELISLPNEIGRLQALQTLD 359

Query: 182 LEGNPLVSPPMDV 194
           +  N L   P+++
Sbjct: 360 IRNNQLAQLPVEI 372



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/182 (37%), Positives = 103/182 (56%), Gaps = 4/182 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+   L+ +  L      +  LP++IG L  L+ LD+S N LE LP  I   + L++
Sbjct: 230 LPESI-GNLVQLHTLSASHTLISRLPSTIGQLIYLQELDLSSNQLEVLPPEIGKLKQLKK 288

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ N N L+ LP  IG  LINL++L I  N ++ LP ++  L  L  L  + N L SLP 
Sbjct: 289 LHLNNNVLKVLPPEIGH-LINLESLQIWSNHLIALPATIGQLKKLAELHLKNNELISLPN 347

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L  L+ L+I  N   L  LP  IGLLM L +L++  N+++ LPD +  L  + +L 
Sbjct: 348 EIGRLQALQTLDIRNN--QLAQLPVEIGLLMQLTKLEIRDNRLSDLPDELWALSDMNQLK 405

Query: 182 LE 183
           LE
Sbjct: 406 LE 407



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 91/165 (55%), Gaps = 3/165 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++  L++    L  LP  IG L +L+ L +    L  LP  I    +LE+L+ +  
Sbjct: 120 GQLESLQYLNLEWGSLATLPKEIGQLKQLRRLSIQSYALTDLPAEIGQLSALEDLSLSCI 179

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ +G +L N ++L ++CN++  LP+SL  L  L+ L  R    + LPE + NL+
Sbjct: 180 QLMTLPEELG-QLKNCRSLLLDCNQLQQLPESLGALEQLQFLTFRGGMFQKLPESIGNLV 238

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
            L  L+ S     +  LP +IG L+ L ELD+S N++  LP  IG
Sbjct: 239 QLHTLSASHTL--ISRLPSTIGQLIYLQELDLSSNQLEVLPPEIG 281



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 101/203 (49%), Gaps = 28/203 (13%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPK---TIENCRSLEELNANFNKLRQL 72
           L + S  L  LP  IG LS L+ L +S   L +LP+    ++NCRSL     + N+L+QL
Sbjct: 151 LSIQSYALTDLPAEIGQLSALEDLSLSCIQLMTLPEELGQLKNCRSL---LLDCNQLQQL 207

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P+++G  L  L+ L+        LP+S+ +L  L  L A    +  LP  +  LI L+ L
Sbjct: 208 PESLG-ALEQLQFLTFRGGMFQKLPESIGNLVQLHTLSASHTLISRLPSTIGQLIYLQEL 266

Query: 133 NISQNF---------------------QYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           ++S N                        L+ LP  IG L++L  L +  N +  LP +I
Sbjct: 267 DLSSNQLEVLPPEIGKLKQLKKLHLNNNVLKVLPPEIGHLINLESLQIWSNHLIALPATI 326

Query: 172 GCLRKLQKLSLEGNPLVSPPMDV 194
           G L+KL +L L+ N L+S P ++
Sbjct: 327 GQLKKLAELHLKNNELISLPNEI 349



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 4/112 (3%)

Query: 92  KIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLL 151
           KI +LP  + HLT L+ L+   +    LP ++  L  L+ LN+   +    TLP  IG L
Sbjct: 65  KITLLPPEIGHLTQLKTLNLSHSECSYLPPEIGQLKQLQSLNLC--WCRFNTLPPEIGQL 122

Query: 152 MSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVK 203
            SL  L++ +  + TLP  IG L++L++LS++   L   P ++ +  LSA++
Sbjct: 123 ESLQYLNLEWGSLATLPKEIGQLKQLRRLSIQSYALTDLPAEIGQ--LSALE 172



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 15/160 (9%)

Query: 47  ESLPKTIENCRSLEELN------------ANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
           E LP+  E   ++EEL             + + K+  LP  IG  L  LKTL+++ ++  
Sbjct: 32  EELPRDKERLLAMEELRFYRNEADESYQFSKYPKITLLPPEIGH-LTQLKTLNLSHSECS 90

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSL 154
            LP  +  L  L+ L+       +LP ++  L +L+ LN+   +  L TLP  IG L  L
Sbjct: 91  YLPPEIGQLKQLQSLNLCWCRFNTLPPEIGQLESLQYLNLE--WGSLATLPKEIGQLKQL 148

Query: 155 VELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             L +    +T LP  IG L  L+ LSL    L++ P ++
Sbjct: 149 RRLSIQSYALTDLPAEIGQLSALEDLSLSCIQLMTLPEEL 188


>gi|418709144|ref|ZP_13269938.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410770480|gb|EKR45699.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|456970649|gb|EMG11403.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 407

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/191 (38%), Positives = 107/191 (56%), Gaps = 5/191 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + +NQL  LP  IG L  LKVL ++ N L +LP+ I   ++L+ELN   N
Sbjct: 94  GKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVN 153

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD--ARLNCLKSLPEDLEN 125
           +L  LP  IG  L NL+ L ++ N++ ILP+ +  L SLR L    +      LP+++  
Sbjct: 154 RLNILPKEIG-RLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQ 212

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L NL+ L++   F  L  LP  IG L +L  LD+  N++T LP  IG L+ L  L L GN
Sbjct: 213 LQNLQELHLK--FNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGN 270

Query: 186 PLVSPPMDVVE 196
            L   P ++ +
Sbjct: 271 QLTILPKEITQ 281



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 113/210 (53%), Gaps = 24/210 (11%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGN--LLESLPKTIENCRSLEELNAN 65
            RL N+  L +  N+L  LP  IG L  L+ L + G       LPK I   ++L+EL+  
Sbjct: 163 GRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLK 222

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
           FN+L  LP  IG +L NL+ L +  N++ ILP+ +  L +L VLD   N L  LP+++  
Sbjct: 223 FNRLTVLPKEIG-QLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 281

Query: 126 LINLEVLNIS--------------QNFQYLE-------TLPYSIGLLMSLVELDVSYNKI 164
           L NL+ LN+               QN Q L+       TLP  IG L +L +L +S N++
Sbjct: 282 LQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQL 341

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           TTLP  IG L+KL+ L L+ N L + P ++
Sbjct: 342 TTLPKEIGRLQKLESLGLDHNQLATLPEEI 371



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 114/195 (58%), Gaps = 4/195 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +T +L N+  L +  N+L  LP  IG L  L++LD+  N L  LPK I   ++L 
Sbjct: 205 ILPKEIT-QLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLL 263

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+ + N+L  LP  I  +L NL+ L++  N+    P+ +T   +L+VLD   N L +LP
Sbjct: 264 VLDLSGNQLTILPKEIT-QLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLP 322

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E++  L NL+ L++S+N   L TLP  IG L  L  L + +N++ TLP+ I  L+ L+KL
Sbjct: 323 EEIGQLQNLQKLHLSRN--QLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKL 380

Query: 181 SLEGNPLVSPPMDVV 195
            L  N L S  ++ +
Sbjct: 381 YLHNNSLPSEKIERI 395



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 107/187 (57%), Gaps = 1/187 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L+  +NQL  LP  IG L  L+ L +  N L +LP+ I   ++L+ L+ N N
Sbjct: 71  GQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNN 130

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+ L++  N++ ILP+ +  L +L+ L   LN L  LPE++  L 
Sbjct: 131 QLTTLPEEIG-KLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLE 189

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  L++    +    LP  I  L +L EL + +N++T LP  IG L+ L+ L L  N L
Sbjct: 190 SLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRL 249

Query: 188 VSPPMDV 194
              P ++
Sbjct: 250 TILPKEI 256



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 108/184 (58%), Gaps = 5/184 (2%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           V +LD+  ++LK LP  IG L  L++L+   N L +LPK I   ++L+EL+   N+L  L
Sbjct: 53  VRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTL 112

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P+ IG +L NLK L +N N++  LP+ +  L +L+ L+  +N L  LP+++  L NL+ L
Sbjct: 113 PEEIG-QLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQEL 171

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDV-SYNK-ITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            +S N   L  LP  IG L SL +L +   NK  T LP  I  L+ LQ+L L+ N L   
Sbjct: 172 YLSLN--RLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVL 229

Query: 191 PMDV 194
           P ++
Sbjct: 230 PKEI 233


>gi|418705776|ref|ZP_13266635.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410764608|gb|EKR35316.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 332

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 122/219 (55%), Gaps = 8/219 (3%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ VLD+ SNQL  LP  I  L  L++L +  N L +L K IE  ++L+ L+ + N+
Sbjct: 114 QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQ 173

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP+ I  +L NLK+L ++ N+    P+ +  L +L+VL    N L  LP ++  L  
Sbjct: 174 LTTLPNEIE-QLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQLTILPNEIAKLKK 232

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S N   L TLP  I  L +L  LD+SYN++T LP  +G L  LQ L L  N L 
Sbjct: 233 LQYLYLSDN--QLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLK 290

Query: 189 SPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
           + P ++       +K   +  +NN+  S ++K  + KL+
Sbjct: 291 TLPNEI-----EQLKNLQTLYLNNNQLSSEEKEKIRKLI 324



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 106/187 (56%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +H NQL  LP  I  L  L++L +  N L +L K IE  ++L+ L+   N
Sbjct: 67  GQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKEIEQLKNLQVLDLGSN 126

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L +  N++  L + +  L +L+ LD   N L +LP ++E L 
Sbjct: 127 QLTVLPQEIE-QLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLK 185

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +S+N     T P  IG L +L  L ++ N++T LP+ I  L+KLQ L L  N L
Sbjct: 186 NLKSLYLSEN--QFATFPKEIGQLQNLKVLFLNNNQLTILPNEIAKLKKLQYLYLSDNQL 243

Query: 188 VSPPMDV 194
           ++ P ++
Sbjct: 244 ITLPKEI 250



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 103/186 (55%), Gaps = 3/186 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V VLD+   +LK LP  IG L  L+ L +  N L  LP+ IE  ++L+ L    N+L 
Sbjct: 47  LEVRVLDLSRQKLKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLT 106

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            L   I  +L NL+ L +  N++ +LPQ +  L +L++L  R N L +L +D+E L NL+
Sbjct: 107 TLSKEIE-QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLK 165

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++S N   L TLP  I  L +L  L +S N+  T P  IG L+ L+ L L  N L   
Sbjct: 166 SLDLSNN--QLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQLTIL 223

Query: 191 PMDVVE 196
           P ++ +
Sbjct: 224 PNEIAK 229



 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 91/160 (56%), Gaps = 4/160 (2%)

Query: 49  LPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRV 108
           L K ++N   +  L+ +  KL+ LP  IG +L NL+ L ++ N++ +LPQ +  L +L++
Sbjct: 39  LTKALQNPLEVRVLDLSRQKLKTLPIEIG-QLKNLQRLYLHYNQLTVLPQEIEQLKNLQL 97

Query: 109 LDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           L  R N L +L +++E L NL+VL++  N   L  LP  I  L +L  L +  N++TTL 
Sbjct: 98  LYLRSNRLTTLSKEIEQLKNLQVLDLGSN--QLTVLPQEIEQLKNLQLLYLRSNRLTTLS 155

Query: 169 DSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSE 208
             I  L+ L+ L L  N L + P + +EQ  +    YLSE
Sbjct: 156 KDIEQLQNLKSLDLSNNQLTTLPNE-IEQLKNLKSLYLSE 194



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 1/86 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A+L  +  L +  NQL  LP  I  L  LK LD+S N L  LPK +    +L+ L+   N
Sbjct: 228 AKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNN 287

Query: 68  KLRQLPDTIGFELINLKTLSINCNKI 93
           +L+ LP+ I  +L NL+TL +N N++
Sbjct: 288 QLKTLPNEIE-QLKNLQTLYLNNNQL 312


>gi|418741032|ref|ZP_13297408.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|410751627|gb|EKR08604.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 288

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 119/220 (54%), Gaps = 8/220 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L+++ NQL  LP  IG L  L+ L++  N    LPK +E   +L+EL    N
Sbjct: 66  GKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+ L +  N+   +P+ +  L +L+ L+   N L +LP ++  L 
Sbjct: 126 QLTTLPNEIG-QLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLGYNQLTALPNEIGQLK 184

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +  N   L  LP  IG L +L  L +S N++TTLP+ IG L+ LQ L L  N L
Sbjct: 185 NLQSLYLGSN--QLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNLL 242

Query: 188 VSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
            + P     +G+  +K      + N+    ++K  + KL+
Sbjct: 243 TTLP-----KGIGQLKNLQKLDLRNNELFSEEKGRIRKLL 277



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 106/184 (57%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++ +N+ K LP  IG L  L+ L+++ N L  LPK I   ++L +LN   N+  
Sbjct: 46  LDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFT 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  +  +L NLK L +  N++  LP  +  L +LRVL+   N  K++P+++  L NL+
Sbjct: 106 ILPKEVE-KLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQ 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+  N   L  LP  IG L +L  L +  N++T LP+ IG L+ LQ L L  N L + 
Sbjct: 165 TLNLGYN--QLTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTL 222

Query: 191 PMDV 194
           P ++
Sbjct: 223 PNEI 226


>gi|307150709|ref|YP_003886093.1| small GTP-binding protein [Cyanothece sp. PCC 7822]
 gi|306980937|gb|ADN12818.1| small GTP-binding protein [Cyanothece sp. PCC 7822]
          Length = 876

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/200 (38%), Positives = 109/200 (54%), Gaps = 12/200 (6%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L+N+  L++  NQL  LP  IG LS L  L +S N L SLP  I     L EL  + N
Sbjct: 59  GKLINLTSLNLTDNQLTALPPEIGKLSNLSRLHLSYNKLTSLPPEIGQLTILCELYLSHN 118

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP TI   L+++  LS++ N++  LP ++  L  L  LD   N L +LP ++  L 
Sbjct: 119 HLETLPFTIE-NLVHISRLSLSYNQLTTLPSAIKGLMRLSWLDLNNNQLTTLPPEIGQLN 177

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  L++  N   L TLP  IG L++L+ +DVSYNK+T+LP  IG L  L  L++  N L
Sbjct: 178 SLNQLDVGYN--QLTTLPPEIGQLLNLISIDVSYNKLTSLPPEIGQLLNLDSLTISNNQL 235

Query: 188 VSPPMDVVEQGLSAVKGYLS 207
              P ++         GYLS
Sbjct: 236 TILPPEI---------GYLS 246



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L+++  L +  NQL  LP++I  L +L  LD++ N L +LP  I    SL +L+  +N+L
Sbjct: 130 LVHISRLSLSYNQLTTLPSAIKGLMRLSWLDLNNNQLTTLPPEIGQLNSLNQLDVGYNQL 189

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  IG +L+NL ++ ++ NK+  LP  +  L +L  L    N L  LP ++  L NL
Sbjct: 190 TTLPPEIG-QLLNLISIDVSYNKLTSLPPEIGQLLNLDSLTISNNQLTILPPEIGYLSNL 248

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
             LN+S N   L +LP  IG L  L++L +S+N++  LP  IG L +L  L L+ N L++
Sbjct: 249 ISLNLSYN--KLSSLPPEIGQLTKLIQLRLSHNQLQELPAEIGHLTQLTSLVLKNNQLLT 306

Query: 190 PPMDVVE 196
            P ++++
Sbjct: 307 LPFELIQ 313



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  N+L  LP  IG L+ L  L +S N LE+LP TIEN   +  L+ ++N
Sbjct: 82  GKLSNLSRLHLSYNKLTSLPPEIGQLTILCELYLSHNHLETLPFTIENLVHISRLSLSYN 141

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDA---------------- 111
           +L  LP  I   L+ L  L +N N++  LP  +  L SL  LD                 
Sbjct: 142 QLTTLPSAIK-GLMRLSWLDLNNNQLTTLPPEIGQLNSLNQLDVGYNQLTTLPPEIGQLL 200

Query: 112 -------RLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L SLP ++  L+NL+ L IS N   L  LP  IG L +L+ L++SYNK+
Sbjct: 201 NLISIDVSYNKLTSLPPEIGQLLNLDSLTISNN--QLTILPPEIGYLSNLISLNLSYNKL 258

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           ++LP  IG L KL +L L  N L   P ++
Sbjct: 259 SSLPPEIGQLTKLIQLRLSHNQLQELPAEI 288



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 70/180 (38%), Positives = 102/180 (56%), Gaps = 3/180 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
            LD+   +L+ LP  IG L+ L+ LD+  N L +LP  I    +L  LN   N+L  LP 
Sbjct: 20  TLDLSFKKLETLPPEIGKLTALRYLDLRNNKLTTLPSEIGKLINLTSLNLTDNQLTALPP 79

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            IG +L NL  L ++ NK+  LP  +  LT L  L    N L++LP  +ENL+++  L++
Sbjct: 80  EIG-KLSNLSRLHLSYNKLTSLPPEIGQLTILCELYLSHNHLETLPFTIENLVHISRLSL 138

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           S N   L TLP +I  LM L  LD++ N++TTLP  IG L  L +L +  N L + P ++
Sbjct: 139 SYN--QLTTLPSAIKGLMRLSWLDLNNNQLTTLPPEIGQLNSLNQLDVGYNQLTTLPPEI 196



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 92/160 (57%), Gaps = 3/160 (1%)

Query: 35  KLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
           K + LD+S   LE+LP  I    +L  L+   NKL  LP  IG +LINL +L++  N++ 
Sbjct: 17  KAETLDLSFKKLETLPPEIGKLTALRYLDLRNNKLTTLPSEIG-KLINLTSLNLTDNQLT 75

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSL 154
            LP  +  L++L  L    N L SLP ++  L  L  L +S N  +LETLP++I  L+ +
Sbjct: 76  ALPPEIGKLSNLSRLHLSYNKLTSLPPEIGQLTILCELYLSHN--HLETLPFTIENLVHI 133

Query: 155 VELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             L +SYN++TTLP +I  L +L  L L  N L + P ++
Sbjct: 134 SRLSLSYNQLTTLPSAIKGLMRLSWLDLNNNQLTTLPPEI 173



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 1/122 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +LLN++ +DV  N+L  LP  IG L  L  L +S N L  LP  I    +L  LN ++N
Sbjct: 197 GQLLNLISIDVSYNKLTSLPPEIGQLLNLDSLTISNNQLTILPPEIGYLSNLISLNLSYN 256

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  LP  IG +L  L  L ++ N++  LP  + HLT L  L  + N L +LP +L  L+
Sbjct: 257 KLSSLPPEIG-QLTKLIQLRLSHNQLQELPAEIGHLTQLTSLVLKNNQLLTLPFELIQLV 315

Query: 128 NL 129
             
Sbjct: 316 QF 317



 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/117 (38%), Positives = 62/117 (52%), Gaps = 4/117 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +LLN+  L + +NQL  LP  IG LS L  L++S N L SLP  I     L +L  + N
Sbjct: 220 GQLLNLDSLTISNNQLTILPPEIGYLSNLISLNLSYNKLSSLPPEIGQLTKLIQLRLSHN 279

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTS---LRVLDARLNCLKSLPE 121
           +L++LP  IG  L  L +L +  N+++ LP  L  L     L  LD + N L   PE
Sbjct: 280 QLQELPAEIG-HLTQLTSLVLKNNQLLTLPFELIQLVQFFKLTQLDLQENLLSIPPE 335


>gi|418712114|ref|ZP_13272859.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791381|gb|EKR85057.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 379

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 111/184 (60%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++ S +L  LP  I  L  LK LD++ N  ++LPK I   ++L+ELN   N+L+
Sbjct: 48  LDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLK 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG +L NL+TL ++ N++   PQ +  L +L+ L+   N L +L +++  L NL+
Sbjct: 108 NLPKEIG-QLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+  ++  L TL   IG L +L +L++  N++  LP+ IG L+ LQ+L L  N L   
Sbjct: 167 KLNL--DYNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTIL 224

Query: 191 PMDV 194
           P ++
Sbjct: 225 PEEI 228



 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 111/186 (59%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  LD+ +NQ K LP  IG L  L+ L++  N L++LPK I   ++L+ L  + N+
Sbjct: 69  QLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNLQTLILSVNR 128

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L   P  IG +L NL+ L+++ N++  L Q +  L +L+ L+   N L +L +++  L N
Sbjct: 129 LTTFPQEIG-QLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKN 187

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ LN+ +N   L+ LP  IG L +L EL +S N++T LP+ IG L+ LQ L L  N L 
Sbjct: 188 LQKLNLDKN--RLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLT 245

Query: 189 SPPMDV 194
             P ++
Sbjct: 246 ILPKEI 251



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 74/200 (37%), Positives = 107/200 (53%), Gaps = 3/200 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  N+LK LPN IG L  L+ L +S N L  LP+ I   ++L+ L    N
Sbjct: 183 GQLKNLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDN 242

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NLK L    N++ ILPQ +  L  L+ L    N L +LP+++  L 
Sbjct: 243 QLTILPKEIG-QLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLE 301

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L ++ N   L TLP  IG L +L       N++T LP  IG L+ LQ L L  N L
Sbjct: 302 NLQELYLNDN--QLTTLPKEIGQLKNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQL 359

Query: 188 VSPPMDVVEQGLSAVKGYLS 207
            S   + +++ L   + Y  
Sbjct: 360 SSQEEERIQKLLPKCQIYFE 379



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVL+     L +LP++++ L NL+ L+++ N    +TLP  IG L +L 
Sbjct: 40  LTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANN--QFKTLPKEIGQLQNLQ 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           EL++  N++  LP  IG L+ LQ L L  N L + P ++
Sbjct: 98  ELNLWNNQLKNLPKEIGQLQNLQTLILSVNRLTTFPQEI 136


>gi|418708997|ref|ZP_13269797.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410770927|gb|EKR46140.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 595

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 107/184 (58%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           LNV VL++   +L  LP  IG L  L+ L++  NLL +LPK I    +L+EL+   N+L 
Sbjct: 48  LNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
             P  I  EL  L++L ++ N+++ILP  +  L +L+ L    N L + P+++  L NL+
Sbjct: 108 TFPAVI-VELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +S+N   L  LP  IG L +L  LD+  N+ T LP  IG L+ LQ L+L  N L + 
Sbjct: 167 KLWLSEN--RLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATL 224

Query: 191 PMDV 194
           P+++
Sbjct: 225 PVEI 228



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 102/183 (55%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L+++      LP  I  L  LK L +  N L+++P  I   ++LE LN   N+L +
Sbjct: 377 NLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELER 436

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ LS++ N + I P  +  L  L+ LD  +N   + P+++  L NL+ 
Sbjct: 437 LPKEIG-QLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQT 495

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LN+ +N   L  L   IG L +L ELD++ N+ T LP  IG L+KLQ L L  N L + P
Sbjct: 496 LNLQRN--QLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP 553

Query: 192 MDV 194
            ++
Sbjct: 554 TEI 556



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 104/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQL   P  I  L KL+ LD+S N L  LP  I   ++L++L    N
Sbjct: 91  GQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKN 150

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL   P  IG +L NL+ L ++ N++  LP+ +  L +L+ LD + N    LP+++  L 
Sbjct: 151 KLTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQ 209

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+S N   L TLP  IG L +L +L +  N++T  P  IG L+ LQ L    N L
Sbjct: 210 NLQTLNLSDN--QLATLPVEIGQLQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPENRL 267

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 268 TALPKEM 274



 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 106/197 (53%), Gaps = 9/197 (4%)

Query: 4   ESLTA------RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCR 57
           E LTA      +L N+  L++  N L  LP  IG L  L+ LD+  N L + P  I   +
Sbjct: 58  EKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQ 117

Query: 58  SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK 117
            LE L+ + N+L  LP+ IG  L NL+ L +  NK+   P+ +  L +L+ L    N L 
Sbjct: 118 KLESLDLSENRLIILPNEIG-RLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLT 176

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
           +LP+++  L NL+ L++  N      LP  IG L +L  L++S N++ TLP  IG L+ L
Sbjct: 177 ALPKEIGQLKNLQTLDLQDN--QFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNL 234

Query: 178 QKLSLEGNPLVSPPMDV 194
           QKL L  N L   P ++
Sbjct: 235 QKLYLRNNRLTVFPKEI 251



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 102/180 (56%), Gaps = 3/180 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +RL N+  L +  N LK +P+ IG L  L+ L++  N LE LPK I   R+L++L+ + N
Sbjct: 396 SRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQN 455

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+  P  I  +L  L+ L ++ N+    P+ +  L +L+ L+ + N L +L  ++  L 
Sbjct: 456 TLKIFPAEIE-QLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQ 514

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L+++ N      LP  IG L  L  LD+  N++TTLP  IG L+ LQ L L+ N L
Sbjct: 515 NLQELDLNDN--QFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQL 572



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 96/173 (55%), Gaps = 8/173 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  N+L  LP  IG L  L+ LD+  N    LPK I   ++L+ LN + N
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDN 219

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +  N++ + P+ +  L +L++L +  N L +LP+++  L 
Sbjct: 220 QLATLPVEIG-QLQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQ 278

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           NL+ LN+  N   L   P  IG L +L +L++  N     P S+   +++QKL
Sbjct: 279 NLQTLNLVNN--RLTVFPKEIGQLQNLQDLELLMN-----PLSLKERKRIQKL 324



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 103/238 (43%), Gaps = 53/238 (22%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L    N+L  LP  +G L  L+ L++  N L   PK I   ++L++L    N
Sbjct: 252 GQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMN 311

Query: 68  KL---------RQLPDT------------------------IGFEL-INLKTLSINCNKI 93
            L         +  PD+                          FEL +  K  S +  K+
Sbjct: 312 PLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKV 371

Query: 94  VI-----------------LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQ 136
           ++                 LP+ ++ L +L+ L   LN LK++P ++  L NLE LN+  
Sbjct: 372 ILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEA 431

Query: 137 NFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           N   LE LP  IG L +L +L +  N +   P  I  L+KLQKL L  N   + P ++
Sbjct: 432 N--ELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEI 487



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 2/79 (2%)

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
            L + L+N +N+ VLN+S   + L  LP  IG L +L EL++ +N +TTLP  IG L  L
Sbjct: 39  DLTKALQNPLNVRVLNLS--GEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENL 96

Query: 178 QKLSLEGNPLVSPPMDVVE 196
           Q+L L  N L + P  +VE
Sbjct: 97  QELDLRDNQLATFPAVIVE 115



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +  ++RVL+     L +LP+++  L NL+ LN+  N   L TLP  IG L +L 
Sbjct: 40  LTKALQNPLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNL--LTTLPKEIGQLENLQ 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           ELD+  N++ T P  I  L+KL+ L L  N L+  P ++
Sbjct: 98  ELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEI 136


>gi|417770639|ref|ZP_12418545.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|409947411|gb|EKN97409.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
          Length = 332

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 122/219 (55%), Gaps = 8/219 (3%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ VLD+ SNQL  LP  I  L  L++L +  N L +L K IE  ++L+ L+ + N+
Sbjct: 114 QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQ 173

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP+ I  +L NLK+L ++ N+    P+ +  L +L+VL    N L  LP ++  L  
Sbjct: 174 LTTLPNEIE-QLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQLTILPNEIAKLKK 232

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S N   L TLP  I  L +L  LD+SYN++T LP  +G L  LQ L L  N L 
Sbjct: 233 LQYLYLSDN--QLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLK 290

Query: 189 SPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
           + P ++       +K   +  +NN+  S ++K  + KL+
Sbjct: 291 TLPNEI-----EQLKNLQTLYLNNNQLSSEEKEKIRKLI 324



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 107/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +H NQL  LP  I  L  L++L +  N L +LPK IE  ++L+ L+   N
Sbjct: 67  GQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSN 126

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L +  N++  L + +  L +L+ LD   N L +LP ++E L 
Sbjct: 127 QLTVLPQEIE-QLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLK 185

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +S+N     T P  IG L +L  L ++ N++T LP+ I  L+KLQ L L  N L
Sbjct: 186 NLKSLYLSEN--QFATFPKEIGQLQNLKVLFLNNNQLTILPNEIAKLKKLQYLYLSDNQL 243

Query: 188 VSPPMDV 194
           ++ P ++
Sbjct: 244 ITLPKEI 250



 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 104/186 (55%), Gaps = 3/186 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V VLD+   +LK LP  IG L  L+ L +  N L  LP+ IE  ++L+ L    N+L 
Sbjct: 47  LEVRVLDLSRQKLKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLT 106

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  I  +L NL+ L +  N++ +LPQ +  L +L++L  R N L +L +D+E L NL+
Sbjct: 107 TLPKEIE-QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLK 165

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++S N   L TLP  I  L +L  L +S N+  T P  IG L+ L+ L L  N L   
Sbjct: 166 SLDLSNN--QLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQLTIL 223

Query: 191 PMDVVE 196
           P ++ +
Sbjct: 224 PNEIAK 229



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 92/161 (57%), Gaps = 4/161 (2%)

Query: 48  SLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
            L K ++N   +  L+ +  KL+ LP  IG +L NL+ L ++ N++ +LPQ +  L +L+
Sbjct: 38  DLTKALQNPLEVRVLDLSRQKLKTLPIEIG-QLKNLQRLYLHYNQLTVLPQEIEQLKNLQ 96

Query: 108 VLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
           +L  R N L +LP+++E L NL+VL++  N   L  LP  I  L +L  L +  N++TTL
Sbjct: 97  LLYLRSNRLTTLPKEIEQLKNLQVLDLGSN--QLTVLPQEIEQLKNLQLLYLRSNRLTTL 154

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSE 208
              I  L+ L+ L L  N L + P + +EQ  +    YLSE
Sbjct: 155 SKDIEQLQNLKSLDLSNNQLTTLPNE-IEQLKNLKSLYLSE 194



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 1/86 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A+L  +  L +  NQL  LP  I  L  LK LD+S N L  LPK +    +L+ L+   N
Sbjct: 228 AKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNN 287

Query: 68  KLRQLPDTIGFELINLKTLSINCNKI 93
           +L+ LP+ I  +L NL+TL +N N++
Sbjct: 288 QLKTLPNEIE-QLKNLQTLYLNNNQL 312


>gi|456825279|gb|EMF73675.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 595

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 108/184 (58%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++   +L  LP  IG L  L+ L++  NLL  LPK I    +L+EL+   N+L 
Sbjct: 48  LDVRVLNLSGEKLTVLPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLA 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
             P  I  EL  L++L ++ N+++ILP  +  L +L+ L    N L + P+++  L NL+
Sbjct: 108 TFPAVI-VELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +S+N   L  LP  IG L +L  LD+  N+ TTLP  IG L+ LQ L+L+ N L + 
Sbjct: 167 KLWLSEN--RLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATL 224

Query: 191 PMDV 194
           P+++
Sbjct: 225 PVEI 228



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 102/183 (55%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L+++      LP  I  L  LK L +  N L+++P  I   ++LE LN   N+L +
Sbjct: 377 NLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELER 436

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ LS++ N + I P  +  L  L+ LD  +N   + P+++  L NL+ 
Sbjct: 437 LPKEIG-QLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQT 495

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LN+ +N   L  LP  I  L +L ELD++ N+ T LP  IG L+KLQ L L  N L + P
Sbjct: 496 LNLQRN--QLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP 553

Query: 192 MDV 194
            ++
Sbjct: 554 TEI 556



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 104/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQL   P  I  L KL+ LD+S N L  LP  I   ++L++L    N
Sbjct: 91  GQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKN 150

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL   P  IG +L NL+ L ++ N++  LP+ +  L +L+ LD + N   +LP+++  L 
Sbjct: 151 KLTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQ 209

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+  N   L TLP  IG L +L EL +  N++T  P  IG L+ LQ L    N L
Sbjct: 210 NLQTLNLQDN--QLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRL 267

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 268 TALPKEM 274



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 103/178 (57%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +RL N+  L +  N LK +P+ IG L  L+ L++  N LE LPK I   R+L++L+ + N
Sbjct: 396 SRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQN 455

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+  P  I  +L  L+ L ++ N+    P+ +  L +L+ L+ + N L +LP ++E L 
Sbjct: 456 TLKIFPAEIE-QLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLK 514

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ L+++ N      LP  IG L  L  LD+  N++TTLP  IG L+ LQ L L+ N
Sbjct: 515 NLQELDLNDN--QFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 570



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 102/187 (54%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  N L  LP  IG L  L+ LD+  N L + P  I   + LE L+ + N
Sbjct: 68  GQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSEN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG  L NL+ L +  NK+   P+ +  L +L+ L    N L +LP+++  L 
Sbjct: 128 RLIILPNEIG-RLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLK 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++  N     TLP  IG L +L  L++  N++ TLP  IG L+ LQ+L L  N L
Sbjct: 187 NLQTLDLQDN--QFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRL 244

Query: 188 VSPPMDV 194
              P ++
Sbjct: 245 TVFPKEI 251



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 100/180 (55%), Gaps = 3/180 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  L ++ N+L   P  IG L  L+ L +S N L +LPK I   ++L+ L+   N
Sbjct: 137 GRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDN 196

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP  IG +L NL+TL++  N++  LP  +  L +L+ L  R N L   P+++  L 
Sbjct: 197 QFTTLPKEIG-QLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQ 255

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L   +N   L  LP  +G L +L  L++  N++T  P  IG L+ LQ L L  NPL
Sbjct: 256 NLQMLCSPEN--RLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPL 313



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 98/178 (55%), Gaps = 8/178 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  N+L  LP  IG L  L+ LD+  N   +LPK I   ++L+ LN   N
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDN 219

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +  N++ + P+ +  L +L++L +  N L +LP+++  L 
Sbjct: 220 QLATLPVEIG-QLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQ 278

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ LN+  N   L   P  IG L +L +L++  N     P S+   +++QKL  + N
Sbjct: 279 NLQTLNLVNN--RLTVFPKEIGQLQNLQDLELLMN-----PLSLKERKRIQKLFPDSN 329



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 103/238 (43%), Gaps = 53/238 (22%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L    N+L  LP  +G L  L+ L++  N L   PK I   ++L++L    N
Sbjct: 252 GQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMN 311

Query: 68  KL---------RQLPDT------------------------IGFEL-INLKTLSINCNKI 93
            L         +  PD+                          FEL +  K  S +  K+
Sbjct: 312 PLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKV 371

Query: 94  VI-----------------LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQ 136
           ++                 LP+ ++ L +L+ L   LN LK++P ++  L NLE LN+  
Sbjct: 372 ILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEA 431

Query: 137 NFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           N   LE LP  IG L +L +L +  N +   P  I  L+KLQKL L  N   + P ++
Sbjct: 432 N--ELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEI 487



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L + L+N +++ VLN+S   + L  LP  IG L +L EL++ +N +T LP  IG L  
Sbjct: 38  RDLTKALQNPLDVRVLNLS--GEKLTVLPKEIGQLKNLQELNLKWNLLTVLPKEIGQLEN 95

Query: 177 LQKLSLEGNPLVSPPMDVVE 196
           LQ+L L  N L + P  +VE
Sbjct: 96  LQELDLRDNQLATFPAVIVE 115


>gi|45656722|ref|YP_000808.1| hypothetical protein LIC10831 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421084319|ref|ZP_15545182.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102944|ref|ZP_15563546.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599958|gb|AAS69445.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367259|gb|EKP22645.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410433219|gb|EKP77567.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 377

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 110/194 (56%), Gaps = 4/194 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +  +L N+ +L +HSN+L  L   I  L  LK LD+S N L +LP  IE  ++L+
Sbjct: 129 VLPQEI-EQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLK 187

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L  + N+    P  IG +L NLK L +N N+I ILP  +  L  L+ L    N L +LP
Sbjct: 188 SLYLSENQFATFPKEIG-QLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLP 246

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++E L NL+ L++S N   L  LP  +G L +L  LD+  N++ TLP  I  L+ LQ L
Sbjct: 247 KEIEQLKNLQTLDLSYN--QLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTL 304

Query: 181 SLEGNPLVSPPMDV 194
            L  N L   P ++
Sbjct: 305 FLSNNQLTILPQEI 318



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/197 (37%), Positives = 110/197 (55%), Gaps = 3/197 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L +  NQ    P  IG L  LKVL ++ N +  LP  I   + L+ L  + N+
Sbjct: 182 QLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQ 241

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  I  +L NL+TL ++ N++ ILP+ +  L +L+ LD R N LK+LP+++E L N
Sbjct: 242 LITLPKEIE-QLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKN 300

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S N   L  LP  IG L +L+ L + YN++TTLP+ I  L+ LQ L L  N   
Sbjct: 301 LQTLFLSNN--QLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFS 358

Query: 189 SPPMDVVEQGLSAVKGY 205
           S     + + L   + Y
Sbjct: 359 SQEKKRIRKLLPKCQIY 375



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +H NQL  LP  I  L  L++L +  N L +LPK IE  ++L+ L+   N
Sbjct: 66  GKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L ++ N++  L + +  L +L+ LD   N L +LP ++E L 
Sbjct: 126 QLTVLPQEIE-QLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLK 184

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +S+N     T P  IG L +L  L ++ N+IT LP+ I  L+KLQ L L  N L
Sbjct: 185 NLKSLYLSEN--QFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQL 242

Query: 188 VSPPMDV 194
           ++ P ++
Sbjct: 243 ITLPKEI 249



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 107/186 (57%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ VLD+ SNQL  LP  I  L  L++L +  N L +L K IE  ++L+ L+ + N+
Sbjct: 113 QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQ 172

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP+ I  +L NLK+L ++ N+    P+ +  L +L+VL    N +  LP ++  L  
Sbjct: 173 LTTLPNEIE-QLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKK 231

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S N   L TLP  I  L +L  LD+SYN++T LP  +G L  LQ L L  N L 
Sbjct: 232 LQYLYLSDN--QLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLK 289

Query: 189 SPPMDV 194
           + P ++
Sbjct: 290 TLPKEI 295



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 103/186 (55%), Gaps = 3/186 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V VLD+   +LK LP  IG L  L+ L +  N L  LP+ IE  ++L+ L    N+L 
Sbjct: 46  LEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLT 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  I  +L NL+ L +  N++ +LPQ +  L +L++L    N L +L +D+E L NL+
Sbjct: 106 TLPKEIE-QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLK 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++S N   L TLP  I  L +L  L +S N+  T P  IG L+ L+ L L  N +   
Sbjct: 165 SLDLSNN--QLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 191 PMDVVE 196
           P ++ +
Sbjct: 223 PNEIAK 228



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 92/161 (57%), Gaps = 4/161 (2%)

Query: 48  SLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
            L K ++N   +  L+ +  +L+ LP  IG +L NL+ L ++ N++ +LPQ +  L +L+
Sbjct: 37  DLTKALQNPLEVRVLDLSRQELKTLPIEIG-KLKNLQRLYLHYNQLTVLPQEIEQLKNLQ 95

Query: 108 VLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
           +L  R N L +LP+++E L NL+VL++  N   L  LP  I  L +L  L +  N++TTL
Sbjct: 96  LLYLRSNRLTTLPKEIEQLKNLQVLDLGSN--QLTVLPQEIEQLKNLQLLYLHSNRLTTL 153

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSE 208
              I  L+ L+ L L  N L + P + +EQ  +    YLSE
Sbjct: 154 SKDIEQLQNLKSLDLSNNQLTTLPNE-IEQLKNLKSLYLSE 193



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/130 (37%), Positives = 74/130 (56%), Gaps = 1/130 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A+L  +  L +  NQL  LP  I  L  L+ LD+S N L  LPK +    +L+ L+   N
Sbjct: 227 AKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN 286

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  I  +L NL+TL ++ N++ ILPQ +  L +L  L    N L +LP ++E L 
Sbjct: 287 QLKTLPKEIE-QLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK 345

Query: 128 NLEVLNISQN 137
           NL+ L ++ N
Sbjct: 346 NLQTLYLNNN 355


>gi|418728131|ref|ZP_13286711.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410777176|gb|EKR57144.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 377

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 110/194 (56%), Gaps = 4/194 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +  +L N+ +L +HSN+L  L   I  L  LK LD+S N L +LP  IE  ++L+
Sbjct: 129 VLPQEI-EQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLK 187

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L  + N+    P  IG +L NLK L +N N+I ILP  +  L  L+ L    N L +LP
Sbjct: 188 SLYLSENQFATFPKEIG-QLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLP 246

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++E L NL+ L++S N   L  LP  +G L +L  LD+  N++ TLP  I  L+ LQ L
Sbjct: 247 KEIEQLKNLQTLDLSYN--QLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTL 304

Query: 181 SLEGNPLVSPPMDV 194
            L  N L   P ++
Sbjct: 305 FLSNNQLTILPQEI 318



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/181 (39%), Positives = 105/181 (58%), Gaps = 3/181 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L +  NQ    P  IG L  LKVL ++ N +  LP  I   + L+ L  + N+
Sbjct: 182 QLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQ 241

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  I  +L NL+TL ++ N++ ILP+ +  L +L+ LD R N LK+LP+++E L N
Sbjct: 242 LITLPKEIE-QLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKN 300

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S N   L  LP  IG L +L+ L + YN++TTLP+ I  L+ LQ L L  N   
Sbjct: 301 LQTLFLSNN--QLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFS 358

Query: 189 S 189
           S
Sbjct: 359 S 359



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +H NQL  LP  I  L  L++L +  N L +LPK IE  ++L+ L+   N
Sbjct: 66  GKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L ++ N++  L + +  L +L+ LD   N L +LP ++E L 
Sbjct: 126 QLTVLPQEIE-QLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLK 184

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +S+N     T P  IG L +L  L ++ N+IT LP+ I  L+KLQ L L  N L
Sbjct: 185 NLKSLYLSEN--QFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQL 242

Query: 188 VSPPMDV 194
           ++ P ++
Sbjct: 243 ITLPKEI 249



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 107/186 (57%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ VLD+ SNQL  LP  I  L  L++L +  N L +L K IE  ++L+ L+ + N+
Sbjct: 113 QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQ 172

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP+ I  +L NLK+L ++ N+    P+ +  L +L+VL    N +  LP ++  L  
Sbjct: 173 LTTLPNEIE-QLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKK 231

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S N   L TLP  I  L +L  LD+SYN++T LP  +G L  LQ L L  N L 
Sbjct: 232 LQYLYLSDN--QLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLK 289

Query: 189 SPPMDV 194
           + P ++
Sbjct: 290 TLPKEI 295



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 103/186 (55%), Gaps = 3/186 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V VLD+   +LK LP  IG L  L+ L +  N L  LP+ IE  ++L+ L    N+L 
Sbjct: 46  LEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLT 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  I  +L NL+ L +  N++ +LPQ +  L +L++L    N L +L +D+E L NL+
Sbjct: 106 TLPKEIE-QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLK 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++S N   L TLP  I  L +L  L +S N+  T P  IG L+ L+ L L  N +   
Sbjct: 165 SLDLSNN--QLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 191 PMDVVE 196
           P ++ +
Sbjct: 223 PNEIAK 228



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 92/161 (57%), Gaps = 4/161 (2%)

Query: 48  SLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
            L K ++N   +  L+ +  +L+ LP  IG +L NL+ L ++ N++ +LPQ +  L +L+
Sbjct: 37  DLTKALQNPLEVRVLDLSRQELKTLPIEIG-KLKNLQRLYLHYNQLTVLPQEIEQLKNLQ 95

Query: 108 VLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
           +L  R N L +LP+++E L NL+VL++  N   L  LP  I  L +L  L +  N++TTL
Sbjct: 96  LLYLRSNRLTTLPKEIEQLKNLQVLDLGSN--QLTVLPQEIEQLKNLQLLYLHSNRLTTL 153

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSE 208
              I  L+ L+ L L  N L + P + +EQ  +    YLSE
Sbjct: 154 SKDIEQLQNLKSLDLSNNQLTTLPNE-IEQLKNLKSLYLSE 193



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/130 (37%), Positives = 74/130 (56%), Gaps = 1/130 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A+L  +  L +  NQL  LP  I  L  L+ LD+S N L  LPK +    +L+ L+   N
Sbjct: 227 AKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN 286

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  I  +L NL+TL ++ N++ ILPQ +  L +L  L    N L +LP ++E L 
Sbjct: 287 QLKTLPKEIE-QLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK 345

Query: 128 NLEVLNISQN 137
           NL+ L ++ N
Sbjct: 346 NLQTLYLNNN 355


>gi|24216019|ref|NP_713500.1| hypothetical protein LA_3320 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075100|ref|YP_005989419.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24197247|gb|AAN50518.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458891|gb|AER03436.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 377

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 110/194 (56%), Gaps = 4/194 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +  +L N+ +L +HSN+L  L   I  L  LK LD+S N L +LP  IE  ++L+
Sbjct: 129 ILPQEI-EQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLK 187

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L  + N+    P  IG +L NLK L +N N+I ILP  +  L  L+ L    N L +LP
Sbjct: 188 SLYLSENQFATFPKEIG-QLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLP 246

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++E L NL+ L++S N   L  LP  +G L +L  LD+  N++ TLP  I  L+ LQ L
Sbjct: 247 KEIEQLKNLQTLDLSYN--QLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTL 304

Query: 181 SLEGNPLVSPPMDV 194
            L  N L   P ++
Sbjct: 305 FLNNNQLTILPQEI 318



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 71/181 (39%), Positives = 105/181 (58%), Gaps = 3/181 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L +  NQ    P  IG L  LKVL ++ N +  LP  I   + L+ L  + N+
Sbjct: 182 QLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQ 241

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  I  +L NL+TL ++ N++ ILP+ +  L +L+ LD R N LK+LP+++E L N
Sbjct: 242 LITLPKEIE-QLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKN 300

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L ++ N   L  LP  IG L +L+ L + YN++TTLP+ I  L+ LQ L L  N   
Sbjct: 301 LQTLFLNNN--QLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFS 358

Query: 189 S 189
           S
Sbjct: 359 S 359



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 107/186 (57%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ VLD+ SNQL  LP  I  L  L++L +  N L +L K IE  ++L+ L+ + N+
Sbjct: 113 QLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQ 172

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP+ I  +L NLK+L ++ N+    P+ +  L +L+VL    N +  LP ++  L  
Sbjct: 173 LTTLPNEIE-QLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKK 231

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S N   L TLP  I  L +L  LD+SYN++T LP  +G L  LQ L L  N L 
Sbjct: 232 LQYLYLSDN--QLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLK 289

Query: 189 SPPMDV 194
           + P ++
Sbjct: 290 TLPKEI 295



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 107/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +H NQL  LP  I  L  L++L +  N L +LP  IE  ++L+ L+   N
Sbjct: 66  GKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L ++ N++  L + +  L +L+ LD   N L +LP ++E L 
Sbjct: 126 QLTILPQEIE-QLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLK 184

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +S+N     T P  IG L +L  L ++ N+IT LP+ I  L+KLQ L L  N L
Sbjct: 185 NLKSLYLSEN--QFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQL 242

Query: 188 VSPPMDV 194
           ++ P ++
Sbjct: 243 ITLPKEI 249



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 104/186 (55%), Gaps = 3/186 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V VLD+   +LK LP  IG L  L+ L +  N L  LP+ IE  ++L+ L    N+L 
Sbjct: 46  LEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLT 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ I  +L NL+ L +  N++ ILPQ +  L +L++L    N L +L +D+E L NL+
Sbjct: 106 TLPNEIE-QLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLK 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++S N   L TLP  I  L +L  L +S N+  T P  IG L+ L+ L L  N +   
Sbjct: 165 SLDLSNN--QLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 191 PMDVVE 196
           P ++ +
Sbjct: 223 PNEIAK 228



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 91/161 (56%), Gaps = 4/161 (2%)

Query: 48  SLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
            L K ++N   +  L+ +  +L+ LP  IG +L NL+ L ++ N++ +LPQ +  L +L+
Sbjct: 37  DLTKALQNPLEVRVLDLSRQELKTLPIEIG-KLKNLQRLYLHYNQLTVLPQEIEQLKNLQ 95

Query: 108 VLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
           +L  R N L +LP ++E L NL+VL++  N   L  LP  I  L +L  L +  N++TTL
Sbjct: 96  LLYLRSNRLTTLPNEIEQLKNLQVLDLGSN--QLTILPQEIEQLKNLQLLYLHSNRLTTL 153

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSE 208
              I  L+ L+ L L  N L + P + +EQ  +    YLSE
Sbjct: 154 SKDIEQLQNLKSLDLSNNQLTTLPNE-IEQLKNLKSLYLSE 193


>gi|418727618|ref|ZP_13286206.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409958976|gb|EKO22753.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 377

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/181 (40%), Positives = 106/181 (58%), Gaps = 3/181 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L +  NQ    P  IG L  LKVL ++ N +  LP  I   + L+ L  + N+
Sbjct: 182 QLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQ 241

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  I  +L NL+TL ++ N++ ILP+ +  L +L+ LD R N LK+LP+++E L N
Sbjct: 242 LITLPKEIE-QLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKN 300

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S N   L  LP  IG L +L+ L + YN++TTLP+ I  L+ LQ L L  N L 
Sbjct: 301 LQTLFLSNN--QLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQLS 358

Query: 189 S 189
           S
Sbjct: 359 S 359



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 110/194 (56%), Gaps = 4/194 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +  +L N+ +L +HSN+L  L   I  L  LK LD+S N L +LP  IE  ++L+
Sbjct: 129 VLPQEI-EQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLK 187

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L  + N+    P  IG +L NLK L +N N+I ILP  +  L  L+ L    N L +LP
Sbjct: 188 SLYLSENQFATFPKEIG-QLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLP 246

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++E L NL+ L++S N   L  LP  +G L +L  LD+  N++ TLP  I  L+ LQ L
Sbjct: 247 KEIEQLKNLQTLDLSYN--QLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTL 304

Query: 181 SLEGNPLVSPPMDV 194
            L  N L   P ++
Sbjct: 305 FLSNNQLTILPQEI 318



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +H NQL  LP  I  L  L++L +  N L +LPK IE  ++L+ L+   N
Sbjct: 66  GKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L ++ N++  L + +  L +L+ LD   N L +LP ++E L 
Sbjct: 126 QLTVLPQEIE-QLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLK 184

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +S+N     T P  IG L +L  L ++ N+IT LP+ I  L+KLQ L L  N L
Sbjct: 185 NLKSLYLSEN--QFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQL 242

Query: 188 VSPPMDV 194
           ++ P ++
Sbjct: 243 ITLPKEI 249



 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 107/186 (57%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ VLD+ SNQL  LP  I  L  L++L +  N L +L K IE  ++L+ L+ + N+
Sbjct: 113 QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQ 172

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP+ I  +L NLK+L ++ N+    P+ +  L +L+VL    N +  LP ++  L  
Sbjct: 173 LTTLPNEIE-QLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKK 231

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S N   L TLP  I  L +L  LD+SYN++T LP  +G L  LQ L L  N L 
Sbjct: 232 LQYLYLSDN--QLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLK 289

Query: 189 SPPMDV 194
           + P ++
Sbjct: 290 TLPKEI 295



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 104/186 (55%), Gaps = 3/186 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VLD+   +LK LP  IG L  L+ L +  N L  LP+ IE  ++L+ L    N+L 
Sbjct: 46  LDVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLT 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  I  +L NL+ L +  N++ +LPQ +  L +L++L    N L +L +D+E L NL+
Sbjct: 106 TLPKEIE-QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLK 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++S N   L TLP  I  L +L  L +S N+  T P  IG L+ L+ L L  N +   
Sbjct: 165 SLDLSNN--QLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 191 PMDVVE 196
           P ++ +
Sbjct: 223 PNEIAK 228



 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 57/162 (35%), Positives = 93/162 (57%), Gaps = 4/162 (2%)

Query: 47  ESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSL 106
           + L K ++N   +  L+ +  +L+ LP  IG +L NL+ L ++ N++ +LPQ +  L +L
Sbjct: 36  QDLTKALQNPLDVRVLDLSRQELKTLPIEIG-KLKNLQRLYLHYNQLTVLPQEIEQLKNL 94

Query: 107 RVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITT 166
           ++L  R N L +LP+++E L NL+VL++  N   L  LP  I  L +L  L +  N++TT
Sbjct: 95  QLLYLRSNRLTTLPKEIEQLKNLQVLDLGSN--QLTVLPQEIEQLKNLQLLYLHSNRLTT 152

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSE 208
           L   I  L+ L+ L L  N L + P + +EQ  +    YLSE
Sbjct: 153 LSKDIEQLQNLKSLDLSNNQLTTLPNE-IEQLKNLKSLYLSE 193



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/130 (37%), Positives = 74/130 (56%), Gaps = 1/130 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A+L  +  L +  NQL  LP  I  L  L+ LD+S N L  LPK +    +L+ L+   N
Sbjct: 227 AKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN 286

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  I  +L NL+TL ++ N++ ILPQ +  L +L  L    N L +LP ++E L 
Sbjct: 287 QLKTLPKEIE-QLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK 345

Query: 128 NLEVLNISQN 137
           NL+ L ++ N
Sbjct: 346 NLQTLYLNNN 355


>gi|20071327|gb|AAH26364.1| Shoc2 protein [Mus musculus]
          Length = 524

 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 105/187 (56%), Gaps = 3/187 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L  +  L ++SN+L+ LP  +GCL  L  L +S N L SLP +++N + L  L+   NKL
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 181

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           R++P  + + L +L TL +  N+I  + + + +L  L +L  R N +K LP ++  L NL
Sbjct: 182 REIPSVV-YRLDSLTTLYLRFNRITTVEKDIKNLPKLSMLSIRENKIKQLPAEIGELCNL 240

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
             L+++ N   LE LP  IG    +  LD+ +N +  LPD+IG L  L +L L  N L +
Sbjct: 241 ITLDVAHN--QLEHLPKEIGNCTQITNLDLQHNDLLDLPDTIGNLSSLNRLGLRYNRLSA 298

Query: 190 PPMDVVE 196
            P  + +
Sbjct: 299 IPRSLAK 305



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 101/185 (54%), Gaps = 12/185 (6%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  +  L+   N L  LPD
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPD 278

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEVLN 133
           TIG  L +L  L +  N++  +P+SL   ++L  L+   N + +LPE  L +L+ L  L 
Sbjct: 279 TIG-NLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLT 337

Query: 134 ISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNPLV 188
           +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N L 
Sbjct: 338 LARNCFQL-----YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLT 392

Query: 189 SPPMD 193
           S P+D
Sbjct: 393 SLPLD 397



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 108/230 (46%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N L  LP++IG LS L  L +  N L ++P+++  C +LEELN   N +  L
Sbjct: 263 ITNLDLQHNDLLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTL 322

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+++   L+ L +L++  NC                                        
Sbjct: 323 PESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLS 382

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N L  +PED+  L++LEVL +S N   L+ L
Sbjct: 383 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKL 440

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ +G L  L ELD+  NK+ +LP+ I  L+ LQKL L  N L + P  +
Sbjct: 441 PHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLSTLPRGI 490



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 89/163 (54%), Gaps = 8/163 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 357 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  L +L  LR LD   N L+SLP ++  L +L
Sbjct: 415 TKIPEDVSG-LVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
           + L ++ N   L TLP  IG L +L  L +  N +T LP+ IG
Sbjct: 474 QKLVLTNN--QLSTLPRGIGHLTNLTHLGLGENLLTHLPEEIG 514



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 99/197 (50%), Gaps = 9/197 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKV---LDVSGNLLESLPKTI-ENCR 57
           +PESL + L+ +  L +  N  +  P  +G  S+      L++  N +  +P  I    +
Sbjct: 322 LPESLLSSLVKLNSLTLARNCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAK 379

Query: 58  SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK 117
            L +LN   N+L  LP   G    ++  L++  N++  +P+ ++ L SL VL    N LK
Sbjct: 380 VLSKLNMKDNQLTSLPLDFGT-WTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 438

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
            LP  L NL  L  L++ +N   LE+LP  I  L  L +L ++ N+++TLP  IG L  L
Sbjct: 439 KLPHGLGNLRKLRELDLEEN--KLESLPNEIAYLKDLQKLVLTNNQLSTLPRGIGHLTNL 496

Query: 178 QKLSLEGNPLVSPPMDV 194
             L L  N L   P ++
Sbjct: 497 THLGLGENLLTHLPEEI 513



 Score = 45.1 bits (105), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L ++   I ILP S+  LT L  L    N L+SLP ++  L+NL  L +S+N   L +LP
Sbjct: 105 LDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLP 162

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            S+  L  L  LD+ +NK+  +P  +  L  L  L L  N + +   D+
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 211



 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 36/65 (55%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  N+L+ LPN I  L  L+ L ++ N L +LP+ I +  +L  L    N L  LP+ 
Sbjct: 453 LDLEENKLESLPNEIAYLKDLQKLVLTNNQLSTLPRGIGHLTNLTHLGLGENLLTHLPEE 512

Query: 76  IGFEL 80
           IG  L
Sbjct: 513 IGRNL 517


>gi|261858318|dbj|BAI45681.1| leucine rich repeat containing 1 [synthetic construct]
          Length = 524

 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 112/193 (58%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 120 LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP+++G  L++LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 179 LDLGNNEIYNLPESVG-ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPE 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L  L ISQN   LET+P  IG L  L  L V  N++T LP+++G    L +L 
Sbjct: 238 EISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLTQLPEAVGECESLTELV 295

Query: 182 LEGNPLVSPPMDV 194
           L  N L++ P  +
Sbjct: 296 LTENQLLTLPKSI 308



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 108/195 (55%), Gaps = 7/195 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   AR L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L
Sbjct: 27  VPEEIYRYARSLEELLLD--ANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N++ ++P++I F    L+    + N +  LP+S   L +L  L      L+SL
Sbjct: 85  VELDVSRNEIPEIPESISF-CKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++ NL NL  L + +N   L  LP S+  L  L ELD+  N+I  LP+S+G L  L+ 
Sbjct: 144 PENIGNLYNLASLELRENL--LTYLPDSLTQLRRLEELDLGNNEIYNLPESVGALLHLKD 201

Query: 180 LSLEGNPLVSPPMDV 194
           L L+GN L   P ++
Sbjct: 202 LWLDGNQLSELPQEI 216



 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 122/250 (48%), Gaps = 32/250 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N++  +P SI     L+V D SGN L  LP++    ++L  L+ N  
Sbjct: 79  ANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDI 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD--------------ARL 113
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD              A L
Sbjct: 139 SLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESVGALL 197

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L  LP+++ NL NL  L++S+N   LE LP  I  L SL +L +S N +
Sbjct: 198 HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN--RLERLPEEISGLTSLTDLVISQNLL 255

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVG 224
            T+PD IG L+KL  L ++ N L   P + V +  S  +  L+E  N     PK    +G
Sbjct: 256 ETIPDGIGKLKKLSILKVDQNRLTQLP-EAVGECESLTELVLTE--NQLLTLPKS---IG 309

Query: 225 KLVKYGTFNG 234
           KL K    N 
Sbjct: 310 KLKKLSNLNA 319



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 108/207 (52%), Gaps = 6/207 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+ A LL++  L +  NQL  LP  IG L  L  LDVS N LE LP+ I    SL +
Sbjct: 189 LPESVGA-LLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTD 247

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L  +PD IG +L  L  L ++ N++  LP+++    SL  L    N L +LP+
Sbjct: 248 LVISQNLLETIPDGIG-KLKKLSILKVDQNRLTQLPEAVGECESLTELVLTENQLLTLPK 306

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L  L  LN  +N   L +LP  IG   SL    V  N++T +P  +    +L  L 
Sbjct: 307 SIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLD 364

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSE 208
           + GN L+  P+ +    L A+  +LS+
Sbjct: 365 VAGNRLLHLPLSLTALKLKAL--WLSD 389



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 96/176 (54%), Gaps = 4/176 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N++ LDV  N+L+ LP  I  L+ L  L +S NLLE++P  I   + L  L  + N+L
Sbjct: 219 LKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRL 278

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            QLP+ +G E  +L  L +  N+++ LP+S+  L  L  L+A  N L SLP+++    +L
Sbjct: 279 TQLPEAVG-ECESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSL 337

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            V  +  N   L  +P  +     L  LDV+ N++  LP S+  L KL+ L L  N
Sbjct: 338 TVFCVRDN--RLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTAL-KLKALWLSDN 390



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 2/138 (1%)

Query: 57  RSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
           R +E ++     L  +P+ I     +L+ L ++ N++  LP+    L  LR L    N +
Sbjct: 12  RHVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + LP ++ N + L  L++S+N   +  +P SI    +L   D S N +T LP+S   L+ 
Sbjct: 72  QRLPPEIANFMQLVELDVSRN--EIPEIPESISFCKALQVADFSGNPLTRLPESFPELQN 129

Query: 177 LQKLSLEGNPLVSPPMDV 194
           L  LS+    L S P ++
Sbjct: 130 LTCLSVNDISLQSLPENI 147


>gi|421124179|ref|ZP_15584449.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421135047|ref|ZP_15595177.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410020930|gb|EKO87725.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410438666|gb|EKP87752.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 595

 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 108/184 (58%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++   +L  LP  IG L  L+ L++  NLL +LPK I    +L+EL+   N+L 
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
             P  I  EL  L++L ++ N+++ILP  +  L +L+ L    N L + P+++  L NL+
Sbjct: 108 TFPAVI-VELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +S+N   L  LP  IG L +L  LD+  N+ T LP  IG L+ LQ L+L+ N L + 
Sbjct: 167 KLWLSEN--RLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATL 224

Query: 191 PMDV 194
           P+++
Sbjct: 225 PVEI 228



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/170 (38%), Positives = 95/170 (55%), Gaps = 3/170 (1%)

Query: 25  CLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLK 84
            LP  I  L  LK L +  N L+ +P  I   R+LE LN   N+L +LP  IG +L NL+
Sbjct: 390 TLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIG-QLRNLQ 448

Query: 85  TLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
            LS++ N + I P  +  L  L+ LD  +N   + P+++  L NL+ LN+ +N   L  L
Sbjct: 449 RLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN--QLTNL 506

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P  I  L +L ELD++ N+ T LP  IG L+KLQ L L  N L + P ++
Sbjct: 507 PAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556



 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 104/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQL   P  I  L KL+ LD+S N L  LP  I   ++L++L    N
Sbjct: 91  GQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKN 150

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL   P  IG +L NL+ L ++ N++  LP+ +  L +L+ LD + N    LP+++  L 
Sbjct: 151 KLTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQ 209

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+  N   L TLP  IG L +L EL +  N++T LP  IG L+ LQ L    N L
Sbjct: 210 NLQTLNLQDN--QLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRL 267

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 268 TALPKEM 274



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 102/178 (57%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +RL N+  L +  N LK +P+ IG L  L+ L++  N LE LPK I   R+L+ L+ + N
Sbjct: 396 SRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQN 455

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+  P  I  +L  L+ L ++ N+    P+ +  L +L+ L+ + N L +LP ++E L 
Sbjct: 456 TLKIFPAEIE-QLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLK 514

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ L+++ N      LP  IG L  L  LD+  N++TTLP  IG L+ LQ L L+ N
Sbjct: 515 NLQELDLNDN--QFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 570



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 101/179 (56%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  N+L  LPN IG L  L+ L +  N L + PK I   ++L++L  + N+L  LP  
Sbjct: 122 LDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKE 181

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL+TL +  N+  ILP+ +  L +L+ L+ + N L +LP ++  L NL+ L + 
Sbjct: 182 IG-QLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLR 240

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L  LP  IG L +L  L    N++T LP  +G L+ LQ L+L  N L   P ++
Sbjct: 241 NN--RLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEI 297



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 102/180 (56%), Gaps = 3/180 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  L ++ N+L   P  IG L  L+ L +S N L +LPK I   ++L+ L+   N
Sbjct: 137 GRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNN 196

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP  IG +L NL+TL++  N++  LP  +  L +L+ L  R N L  LP+++  L 
Sbjct: 197 QFTILPKEIG-QLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQ 255

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L   +N   L  LP  +G L +L  L++  N++T LP  IG L+ LQ L L  NPL
Sbjct: 256 NLQMLCSPEN--RLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPL 313



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 108/197 (54%), Gaps = 9/197 (4%)

Query: 4   ESLTA------RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCR 57
           E LTA      +L N+  L++  N L  LP  IG L  L+ LD+  N L + P  I   +
Sbjct: 58  EKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQ 117

Query: 58  SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK 117
            LE L+ + N+L  LP+ IG  L NL+ L +  NK+   P+ +  L +L+ L    N L 
Sbjct: 118 KLESLDLSENRLIILPNEIG-RLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLT 176

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
           +LP+++  L NL+ L++ QN Q+   LP  IG L +L  L++  N++ TLP  IG L+ L
Sbjct: 177 ALPKEIGQLKNLQTLDL-QNNQF-TILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNL 234

Query: 178 QKLSLEGNPLVSPPMDV 194
           Q+L L  N L   P ++
Sbjct: 235 QELYLRNNRLTVLPKEI 251



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/178 (34%), Positives = 99/178 (55%), Gaps = 8/178 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  N+L  LP  IG L  L+ LD+  N    LPK I   ++L+ LN   N
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDN 219

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +  N++ +LP+ +  L +L++L +  N L +LP+++  L 
Sbjct: 220 QLATLPVEIG-QLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLK 278

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ LN+  N   L  LP  IG L +L +L++  N     P S+   +++QKL  + N
Sbjct: 279 NLQTLNLVNN--RLTVLPKEIGQLQNLQDLELLMN-----PLSLKERKRIQKLFPDSN 329



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 98/238 (41%), Gaps = 53/238 (22%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L    N+L  LP  +G L  L+ L++  N L  LPK I   ++L++L    N
Sbjct: 252 GQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMN 311

Query: 68  KL---------RQLPDT------------------------------------------I 76
            L         +  PD+                                          +
Sbjct: 312 PLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKV 371

Query: 77  GFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQ 136
             +  NL+ L +       LP+ ++ L +L+ L   LN LK +P ++  L NLE LN+  
Sbjct: 372 ILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEA 431

Query: 137 NFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           N   LE LP  IG L +L  L +  N +   P  I  L+KLQKL L  N   + P ++
Sbjct: 432 N--ELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEI 487



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L + L+N +++ VLN+S   + L  LP  IG L +L EL++ +N +TTLP  IG L  
Sbjct: 38  RDLTKALQNPLDVRVLNLS--GEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLEN 95

Query: 177 LQKLSLEGNPLVSPPMDVVE 196
           LQ+L L  N L + P  +VE
Sbjct: 96  LQELDLRDNQLATFPAVIVE 115



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVL+     L +LP+++  L NL+ LN+  N   L TLP  IG L +L 
Sbjct: 40  LTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNL--LTTLPKEIGQLENLQ 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           ELD+  N++ T P  I  L+KL+ L L  N L+  P ++
Sbjct: 98  ELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEI 136


>gi|432848516|ref|XP_004066384.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Oryzias
           latipes]
          Length = 582

 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 113/196 (57%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+P S+   L  +  L ++SN+L+ LP  +GCLS L  L +S N L SLP ++++ + L 
Sbjct: 114 MLPTSI-KELNQLAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLR 172

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKLR++P  + + L +L TL +  N+I  + + + +L+ L +L  R N +K LP
Sbjct: 173 MLDLRHNKLREIPAVV-YRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLP 231

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG    +  LD+ +N++  LP++IG L  + +L
Sbjct: 232 AEIGELCNLITLDVAHN--QLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRL 289

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N L + P  + +
Sbjct: 290 GLRYNRLSAIPRSLAK 305



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 91/160 (56%), Gaps = 2/160 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           ++V L++ +NQL  +P  +  L  L+VL +S NLL+ LP  I N R L EL+   NKL  
Sbjct: 403 SMVELNLATNQLAKIPEDVCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLEC 462

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ I + L +L+ L +  N++  LP+ + HLT+L  L    N L+ LPE++  L NLE 
Sbjct: 463 LPNEIAY-LKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEE 521

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           L ++ N   L +LP+ + L   L  + +    +T LP  I
Sbjct: 522 LYLNDN-PNLHSLPFELALCSKLAIMSIENCPLTHLPAQI 560



 Score = 80.9 bits (198), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 98/183 (53%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N + LD+    +  LP SI  L++L  L +  N L+SLP  +     L  L  + N L  
Sbjct: 101 NSMRLDLSKRSIHMLPTSIKELNQLAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTS 160

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LPD++   L  L+ L +  NK+  +P  +  LTSL  L  R N + ++ +D+ NL  L +
Sbjct: 161 LPDSLD-SLKKLRMLDLRHNKLREIPAVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTM 219

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L+I +N   ++ LP  IG L +L+ LDV++N++  LP  IG   ++  L L+ N L+  P
Sbjct: 220 LSIREN--KIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLP 277

Query: 192 MDV 194
             +
Sbjct: 278 ETI 280



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 100/187 (53%), Gaps = 12/187 (6%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           + +L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  +  L+   N+L  L
Sbjct: 217 LTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDL 276

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEV 131
           P+TIG  L ++  L +  N++  +P+SL     L  L+   N +  LPE  L +L+NL  
Sbjct: 277 PETIG-NLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTS 335

Query: 132 LNISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNP 186
           L +++N FQ      Y +G      ++  L++ +N I  +P  I    K L KL+++ N 
Sbjct: 336 LTLARNCFQ-----SYPVGGPSQFSTIYSLNMEHNHINKIPFGIFSRAKVLSKLNMKDNQ 390

Query: 187 LVSPPMD 193
           L S P+D
Sbjct: 391 LTSLPLD 397



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 107/230 (46%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N+L  LP +IG L+ +  L +  N L ++P+++  CR LEELN   N +  L
Sbjct: 263 ITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVL 322

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+ +   L+NL +L++  NC                                        
Sbjct: 323 PEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNHINKIPFGIFSRAKVLS 382

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N L  +PED+  L++LEVL +S N   L+ L
Sbjct: 383 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLAKIPEDVCGLVSLEVLILSNNL--LKKL 440

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ IG L  L ELD+  NK+  LP+ I  L+ LQKL L  N L + P  +
Sbjct: 441 PHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 8/177 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N +  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 357 IYSLNMEHNHINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  + +L  LR LD   N L+ LP ++  L +L
Sbjct: 415 AKIPEDV-CGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDL 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           + L ++ N   L TLP  IG L +L  L +  N +  LP+ IG L  L++L L  NP
Sbjct: 474 QKLVLTNN--QLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNP 528


>gi|418703936|ref|ZP_13264818.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410766420|gb|EKR37105.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 595

 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 108/184 (58%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++   +L  LP  IG L  L+ L++  NLL +LPK I    +L+EL+   N+L 
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
             P  I  EL  L++L ++ N+++ILP  +  L +L+ L    N L + P+++  L NL+
Sbjct: 108 TFPAVI-VELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +S+N   L  LP  IG L +L  LD+  N+ T LP  IG L+ LQ L+L+ N L + 
Sbjct: 167 KLWLSEN--RLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATL 224

Query: 191 PMDV 194
           P+++
Sbjct: 225 PVEI 228



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/170 (38%), Positives = 95/170 (55%), Gaps = 3/170 (1%)

Query: 25  CLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLK 84
            LP  I  L  LK L +  N L+ +P  I   R+LE LN   N+L +LP  IG +L NL+
Sbjct: 390 TLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIG-QLRNLQ 448

Query: 85  TLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
            LS++ N + I P  +  L  L+ LD  +N   + P+++  L NL+ LN+ +N   L  L
Sbjct: 449 RLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN--QLTNL 506

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P  I  L +L ELD++ N+ T LP  IG L+KLQ L L  N L + P ++
Sbjct: 507 PAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556



 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 104/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQL   P  I  L KL+ LD+S N L  LP  I   ++L++L    N
Sbjct: 91  GQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKN 150

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL   P  IG +L NL+ L ++ N++  LP+ +  L +L+ LD + N    LP+++  L 
Sbjct: 151 KLTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQ 209

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+  N   L TLP  IG L +L EL +  N++T LP  IG L+ LQ L    N L
Sbjct: 210 NLQTLNLQDN--QLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRL 267

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 268 TAFPKEM 274



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 102/178 (57%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +RL N+  L +  N LK +P+ IG L  L+ L++  N LE LPK I   R+L+ L+ + N
Sbjct: 396 SRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQN 455

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+  P  I  +L  L+ L ++ N+    P+ +  L +L+ L+ + N L +LP ++E L 
Sbjct: 456 TLKIFPAEIE-QLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLK 514

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ L+++ N      LP  IG L  L  LD+  N++TTLP  IG L+ LQ L L+ N
Sbjct: 515 NLQELDLNDN--QFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 570



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/180 (37%), Positives = 101/180 (56%), Gaps = 3/180 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  L ++ N+L   P  IG L  L+ L +S N L +LPK I   ++L+ L+   N
Sbjct: 137 GRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNN 196

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP  IG +L NL+TL++  N++  LP  +  L +L+ L  R N L  LP+++  L 
Sbjct: 197 QFTILPKEIG-QLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQ 255

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L   +N   L   P  +G L +L  L++  N++T LP  IG L+ LQ L L  NPL
Sbjct: 256 NLQMLCSPEN--RLTAFPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPL 313



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 108/197 (54%), Gaps = 9/197 (4%)

Query: 4   ESLTA------RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCR 57
           E LTA      +L N+  L++  N L  LP  IG L  L+ LD+  N L + P  I   +
Sbjct: 58  EKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQ 117

Query: 58  SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK 117
            LE L+ + N+L  LP+ IG  L NL+ L +  NK+   P+ +  L +L+ L    N L 
Sbjct: 118 KLESLDLSENRLIILPNEIG-RLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLT 176

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
           +LP+++  L NL+ L++ QN Q+   LP  IG L +L  L++  N++ TLP  IG L+ L
Sbjct: 177 ALPKEIGQLKNLQTLDL-QNNQF-TILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNL 234

Query: 178 QKLSLEGNPLVSPPMDV 194
           Q+L L  N L   P ++
Sbjct: 235 QELYLRNNRLTVLPKEI 251



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 98/178 (55%), Gaps = 8/178 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  N+L  LP  IG L  L+ LD+  N    LPK I   ++L+ LN   N
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDN 219

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +  N++ +LP+ +  L +L++L +  N L + P+++  L 
Sbjct: 220 QLATLPVEIG-QLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTAFPKEMGQLK 278

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ LN+  N   L  LP  IG L +L +L++  N     P S+   +++QKL  + N
Sbjct: 279 NLQTLNLVNN--RLTVLPKEIGQLQNLQDLELLMN-----PLSLKERKRIQKLFPDSN 329



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 95/215 (44%), Gaps = 30/215 (13%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLL---------ESLPKTIENCRS 58
            +L N+  L++ +N+L  LP  IG L  L+ L++  N L         +  P +  + R 
Sbjct: 275 GQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLRE 334

Query: 59  LEE-------------------LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQS 99
           + E                   L   +    QL   +  +  NL+ L +       LP+ 
Sbjct: 335 VAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKE 394

Query: 100 LTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDV 159
           ++ L +L+ L   LN LK +P ++  L NLE LN+  N   LE LP  IG L +L  L +
Sbjct: 395 ISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEAN--ELERLPKEIGQLRNLQRLSL 452

Query: 160 SYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N +   P  I  L+KLQKL L  N   + P ++
Sbjct: 453 HQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEI 487



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L + L+N +++ VLN+S   + L  LP  IG L +L EL++ +N +TTLP  IG L  
Sbjct: 38  RDLTKALQNPLDVRVLNLS--GEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLEN 95

Query: 177 LQKLSLEGNPLVSPPMDVVE 196
           LQ+L L  N L + P  +VE
Sbjct: 96  LQELDLRDNQLATFPAVIVE 115



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVL+     L +LP+++  L NL+ LN+  N   L TLP  IG L +L 
Sbjct: 40  LTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNL--LTTLPKEIGQLENLQ 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           ELD+  N++ T P  I  L+KL+ L L  N L+  P ++
Sbjct: 98  ELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEI 136


>gi|418717432|ref|ZP_13277094.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410787029|gb|EKR80764.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 595

 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 108/184 (58%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++   +L  LP  IG L  L+ L++  NLL +LPK I    +L+EL+   N+L 
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
             P  I  EL  L++L ++ N+++ILP  +  L +L+ L    N L + P+++  L NL+
Sbjct: 108 TFPAVI-VELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +S+N   L  LP  IG L +L  LD+  N+ T LP  IG L+ LQ L+L+ N L + 
Sbjct: 167 KLWLSEN--RLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATL 224

Query: 191 PMDV 194
           P+++
Sbjct: 225 PVEI 228



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/170 (38%), Positives = 95/170 (55%), Gaps = 3/170 (1%)

Query: 25  CLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLK 84
            LP  I  L  LK L +  N L+ +P  I   R+LE LN   N+L +LP  IG +L NL+
Sbjct: 390 TLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIG-QLRNLQ 448

Query: 85  TLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
            LS++ N + I P  +  L  L+ LD  +N   + P+++  L NL+ LN+ +N   L  L
Sbjct: 449 RLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN--QLTNL 506

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P  I  L +L ELD++ N+ T LP  IG L+KLQ L L  N L + P ++
Sbjct: 507 PAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 104/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQL   P  I  L KL+ LD+S N L  LP  I   ++L++L    N
Sbjct: 91  GQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKN 150

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL   P  IG +L NL+ L ++ N++  LP+ +  L +L+ LD + N    LP+++  L 
Sbjct: 151 KLTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQ 209

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+  N   L TLP  IG L +L EL +  N++T LP  IG L+ LQ L    N L
Sbjct: 210 NLQTLNLQDN--QLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRL 267

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 268 TALPKEM 274



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 102/178 (57%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +RL N+  L +  N LK +P+ IG L  L+ L++  N LE LPK I   R+L+ L+ + N
Sbjct: 396 SRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQN 455

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+  P  I  +L  L+ L ++ N+    P+ +  L +L+ L+ + N L +LP ++E L 
Sbjct: 456 TLKIFPAEIE-QLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLK 514

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ L+++ N      LP  IG L  L  LD+  N++TTLP  IG L+ LQ L L+ N
Sbjct: 515 NLQELDLNDN--QFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 570



 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 101/179 (56%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  N+L  LPN IG L  L+ L +  N L + PK I   ++L++L  + N+L  LP  
Sbjct: 122 LDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKE 181

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL+TL +  N+  ILP+ +  L +L+ L+ + N L +LP ++  L NL+ L + 
Sbjct: 182 IG-QLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLR 240

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L  LP  IG L +L  L    N++T LP  +G L+ LQ L+L  N L   P ++
Sbjct: 241 NN--RLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEI 297



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 101/180 (56%), Gaps = 3/180 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  L ++ N+L   P  IG L  L+ L +S N L +LPK I   ++L+ L+   N
Sbjct: 137 GRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNN 196

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP  IG +L NL+TL++  N++  LP  +  L +L+ L  R N L  LP+++  L 
Sbjct: 197 QFTILPKEIG-QLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQ 255

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L   +N   L  LP  +G L +L  L++  N++T LP  IG L+ LQ L L  NPL
Sbjct: 256 NLQTLCSPEN--RLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPL 313



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 108/197 (54%), Gaps = 9/197 (4%)

Query: 4   ESLTA------RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCR 57
           E LTA      +L N+  L++  N L  LP  IG L  L+ LD+  N L + P  I   +
Sbjct: 58  EKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQ 117

Query: 58  SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK 117
            LE L+ + N+L  LP+ IG  L NL+ L +  NK+   P+ +  L +L+ L    N L 
Sbjct: 118 KLESLDLSENRLIILPNEIG-RLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLT 176

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
           +LP+++  L NL+ L++ QN Q+   LP  IG L +L  L++  N++ TLP  IG L+ L
Sbjct: 177 ALPKEIGQLKNLQTLDL-QNNQF-TILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNL 234

Query: 178 QKLSLEGNPLVSPPMDV 194
           Q+L L  N L   P ++
Sbjct: 235 QELYLRNNRLTVLPKEI 251



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 8/178 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  N+L  LP  IG L  L+ LD+  N    LPK I   ++L+ LN   N
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDN 219

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +  N++ +LP+ +  L +L+ L +  N L +LP+++  L 
Sbjct: 220 QLATLPVEIG-QLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLK 278

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ LN+  N   L  LP  IG L +L +L++  N     P S+   +++QKL  + N
Sbjct: 279 NLQTLNLVNN--RLTVLPKEIGQLQNLQDLELLMN-----PLSLKERKRIQKLFPDSN 329



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 125/309 (40%), Gaps = 88/309 (28%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L    N+L  LP  +G L  L+ L++  N L  LPK I   ++L++L    N
Sbjct: 252 GQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMN 311

Query: 68  KL---------RQLPDT------------------------------------------I 76
            L         +  PD+                                          +
Sbjct: 312 PLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKV 371

Query: 77  GFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQ 136
             +  NL+ L +       LP+ ++ L +L+ L   LN LK +P ++  L NLE LN+  
Sbjct: 372 ILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEA 431

Query: 137 NFQYLETLPYSIGLLMS-----------------------LVELDVSYNKITTLPDSIGC 173
           N   LE LP  IG L +                       L +LD+S N+ TT P  IG 
Sbjct: 432 N--ELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGK 489

Query: 174 LRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKS--PKKKSWVGKLVKYGT 231
           L  LQ L+L+ N L + P ++       +K      +N++  +  PK+   +GKL K  T
Sbjct: 490 LENLQTLNLQRNQLTNLPAEI-----EQLKNLQELDLNDNQFTVLPKE---IGKLKKLQT 541

Query: 232 FNGALRNHR 240
            +  LRN++
Sbjct: 542 LD--LRNNQ 548



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L + L+N +++ VLN+S   + L  LP  IG L +L EL++ +N +TTLP  IG L  
Sbjct: 38  RDLTKALQNPLDVRVLNLS--GEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLEN 95

Query: 177 LQKLSLEGNPLVSPPMDVVE 196
           LQ+L L  N L + P  +VE
Sbjct: 96  LQELDLRDNQLATFPAVIVE 115



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVL+     L +LP+++  L NL+ LN+  N   L TLP  IG L +L 
Sbjct: 40  LTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNL--LTTLPKEIGQLENLQ 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           ELD+  N++ T P  I  L+KL+ L L  N L+  P ++
Sbjct: 98  ELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEI 136


>gi|417761388|ref|ZP_12409399.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417774084|ref|ZP_12421957.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418672890|ref|ZP_13234221.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409942739|gb|EKN88345.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410576120|gb|EKQ39129.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410580084|gb|EKQ47914.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 267

 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 101/183 (55%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L++  NQL  LP  IG L KL+VL+++GN   SLPK I   ++LE L+   N+   
Sbjct: 18  NLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTT 77

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ L++  N++  LP+ +  L +L  LD   N    LP+++  L  LE 
Sbjct: 78  LPKEIG-QLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTFLPKEIGQLQKLEA 136

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LN+  N       P  I    SL  L +S +++ TLP  I  L+ LQ L L+GN L S P
Sbjct: 137 LNLDHN--RFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLTSLP 194

Query: 192 MDV 194
            ++
Sbjct: 195 KEI 197



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 103/178 (57%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQ   LP  IG L  L+VL+++GN L SLPK I   ++LE L+   N
Sbjct: 60  GQLQNLERLDLAGNQFTTLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGN 119

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP  IG +L  L+ L+++ N+  I P+ +    SL+ L    + LK+LP+++  L 
Sbjct: 120 QFTFLPKEIG-QLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQ 178

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ L++  N   L +LP  IG L +L EL++  NK+ TLP  I  L+ LQ L L  N
Sbjct: 179 NLQSLHLDGN--QLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSN 234



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 98/176 (55%), Gaps = 5/176 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           ++L+ LP  IG    L+ L++ GN L SLPK I   + L  LN   N+   LP  IG +L
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIG-QL 62

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN-FQ 139
            NL+ L +  N+   LP+ +  L +LRVL+   N L SLP+++  L NLE L+++ N F 
Sbjct: 63  QNLERLDLAGNQFTTLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFT 122

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
           +   LP  IG L  L  L++ +N+ T  P  I   + L+ L L G+ L + P +++
Sbjct: 123 F---LPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEIL 175



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 2/82 (2%)

Query: 113 LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
           L+ L+SLP  +    NLE LN+  N   L +LP  IG L  L  L+++ N+ T+LP  IG
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGN--QLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIG 60

Query: 173 CLRKLQKLSLEGNPLVSPPMDV 194
            L+ L++L L GN   + P ++
Sbjct: 61  QLQNLERLDLAGNQFTTLPKEI 82


>gi|418693267|ref|ZP_13254330.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400356925|gb|EJP13083.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 595

 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 108/184 (58%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++   +L  LP  IG L  L+ L++  NLL +LPK I    +L+EL+   N+L 
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
             P  I  EL  L++L ++ N+++ILP  +  L +L+ L    N L + P+++  L NL+
Sbjct: 108 TFPAVI-VELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +S+N   L  LP  IG L +L  LD+  N+ T LP  IG L+ LQ L+L+ N L + 
Sbjct: 167 KLWLSEN--RLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATL 224

Query: 191 PMDV 194
           P+++
Sbjct: 225 PVEI 228



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/170 (38%), Positives = 95/170 (55%), Gaps = 3/170 (1%)

Query: 25  CLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLK 84
            LP  I  L  LK L +  N L+ +P  I   R+LE LN   N+L +LP  IG +L NL+
Sbjct: 390 TLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIG-QLRNLQ 448

Query: 85  TLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
            LS++ N + I P  +  L  L+ LD  +N   + P+++  L NL+ LN+ +N   L  L
Sbjct: 449 RLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN--QLTNL 506

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P  I  L +L ELD++ N+ T LP  IG L+KLQ L L  N L + P ++
Sbjct: 507 PAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 104/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQL   P  I  L KL+ LD+S N L  LP  I   ++L++L    N
Sbjct: 91  GQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKN 150

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL   P  IG +L NL+ L ++ N++  LP+ +  L +L+ LD + N    LP+++  L 
Sbjct: 151 KLTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQ 209

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+  N   L TLP  IG L +L EL +  N++T LP  IG L+ LQ L    N L
Sbjct: 210 NLQTLNLQDN--QLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRL 267

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 268 TALPKEM 274



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 102/178 (57%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +RL N+  L +  N LK +P+ IG L  L+ L++  N LE LPK I   R+L+ L+ + N
Sbjct: 396 SRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQN 455

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+  P  I  +L  L+ L ++ N+    P+ +  L +L+ L+ + N L +LP ++E L 
Sbjct: 456 TLKIFPAEIE-QLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLK 514

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ L+++ N      LP  IG L  L  LD+  N++TTLP  IG L+ LQ L L+ N
Sbjct: 515 NLQELDLNDN--QFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 570



 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 101/179 (56%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  N+L  LPN IG L  L+ L +  N L + PK I   ++L++L  + N+L  LP  
Sbjct: 122 LDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKE 181

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL+TL +  N+  ILP+ +  L +L+ L+ + N L +LP ++  L NL+ L + 
Sbjct: 182 IG-QLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLR 240

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L  LP  IG L +L  L    N++T LP  +G L+ LQ L+L  N L   P ++
Sbjct: 241 NN--RLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEI 297



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 101/180 (56%), Gaps = 3/180 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  L ++ N+L   P  IG L  L+ L +S N L +LPK I   ++L+ L+   N
Sbjct: 137 GRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNN 196

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP  IG +L NL+TL++  N++  LP  +  L +L+ L  R N L  LP+++  L 
Sbjct: 197 QFTILPKEIG-QLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQ 255

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L   +N   L  LP  +G L +L  L++  N++T LP  IG L+ LQ L L  NPL
Sbjct: 256 NLQTLCSPEN--RLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPL 313



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 108/197 (54%), Gaps = 9/197 (4%)

Query: 4   ESLTA------RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCR 57
           E LTA      +L N+  L++  N L  LP  IG L  L+ LD+  N L + P  I   +
Sbjct: 58  EKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQ 117

Query: 58  SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK 117
            LE L+ + N+L  LP+ IG  L NL+ L +  NK+   P+ +  L +L+ L    N L 
Sbjct: 118 KLESLDLSENRLIILPNEIG-RLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLT 176

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
           +LP+++  L NL+ L++ QN Q+   LP  IG L +L  L++  N++ TLP  IG L+ L
Sbjct: 177 ALPKEIGQLKNLQTLDL-QNNQF-TILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNL 234

Query: 178 QKLSLEGNPLVSPPMDV 194
           Q+L L  N L   P ++
Sbjct: 235 QELYLRNNRLTVLPKEI 251



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 8/178 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  N+L  LP  IG L  L+ LD+  N    LPK I   ++L+ LN   N
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDN 219

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +  N++ +LP+ +  L +L+ L +  N L +LP+++  L 
Sbjct: 220 QLATLPVEIG-QLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLK 278

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ LN+  N   L  LP  IG L +L +L++  N     P S+   +++QKL  + N
Sbjct: 279 NLQTLNLVNN--RLTVLPKEIGQLQNLQDLELLMN-----PLSLKERKRIQKLFPDSN 329



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 97/238 (40%), Gaps = 53/238 (22%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L    N+L  LP  +G L  L+ L++  N L  LPK I   ++L++L    N
Sbjct: 252 GQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMN 311

Query: 68  KL---------RQLPDT------------------------------------------I 76
            L         +  PD+                                          +
Sbjct: 312 PLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKV 371

Query: 77  GFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQ 136
             +  NL+ L +       LP+ ++ L +L+ L   LN LK +P ++  L NLE LN+  
Sbjct: 372 ILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEA 431

Query: 137 NFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           N   LE LP  IG L +L  L +  N +   P  I  L+KLQKL L  N   + P ++
Sbjct: 432 N--ELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEI 487



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L + L+N +++ VLN+S   + L  LP  IG L +L EL++ +N +TTLP  IG L  
Sbjct: 38  RDLTKALQNPLDVRVLNLS--GEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLEN 95

Query: 177 LQKLSLEGNPLVSPPMDVVE 196
           LQ+L L  N L + P  +VE
Sbjct: 96  LQELDLRDNQLATFPAVIVE 115



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 9/126 (7%)

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLT-------SLRVLDARLNCLKSLPEDLENLIN 128
           I  +L+ L TLS       + P +   LT        +RVL+     L +LP+++  L N
Sbjct: 13  ITIDLLFLITLSCEIQAEEVEPGTYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKN 72

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ LN+  N   L TLP  IG L +L ELD+  N++ T P  I  L+KL+ L L  N L+
Sbjct: 73  LQELNLKWNL--LTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLI 130

Query: 189 SPPMDV 194
             P ++
Sbjct: 131 ILPNEI 136


>gi|359728044|ref|ZP_09266740.1| hypothetical protein Lwei2_14432 [Leptospira weilii str.
           2006001855]
          Length = 456

 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/195 (39%), Positives = 114/195 (58%), Gaps = 6/195 (3%)

Query: 2   IPESLTARLLN---VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRS 58
           I  +LT  L N   V +L ++SNQL  LP  IG L KL+ L    N L+++PK I   ++
Sbjct: 86  IYHNLTEALQNPTDVQILYLNSNQLITLPKEIGKLKKLRELHSYNNQLKAIPKEIGKLQN 145

Query: 59  LEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKS 118
           L++L+ N N+L+ +P  IG +L NL+ L +  N++  +P+    L SL+VL    N LK+
Sbjct: 146 LQKLDLNHNQLKTIPKEIG-KLQNLQELGLIGNQLKTIPKEFGKLKSLQVLYLSNNQLKT 204

Query: 119 LPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQ 178
           LP++  +L +L+VL +S N   L+TLP  I  L  L EL +  N++ TLP  IG L+ LQ
Sbjct: 205 LPKEFGDLKSLQVLYLSNN--QLKTLPKEIRKLKKLQELALYNNQLKTLPKEIGKLQNLQ 262

Query: 179 KLSLEGNPLVSPPMD 193
            L L  N L   P +
Sbjct: 263 VLGLSYNQLKKLPKE 277



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 108/179 (60%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +++NQLK LP  IG L  L+VL +S N L+ LPK     +SL++L  +  +L   P+ 
Sbjct: 241 LALYNNQLKTLPKEIGKLQNLQVLGLSYNQLKKLPKEFGKLKSLQKLYLSNYQLTTFPNE 300

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG EL NL  L ++ N++   P  +  L +L  L    N L++LP+ +E L NL+VL ++
Sbjct: 301 IG-ELQNLTELYLSNNQLTTFPNEIGELQNLTELYLSNNQLQALPKKIEKLKNLQVLILN 359

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L T+P  IG L +L  L ++ N++TT+P+ IG L+ L++L+L  N L + P ++
Sbjct: 360 NN--QLTTIPNEIGELKNLQVLTLNNNQLTTIPNEIGELKNLRELNLSRNQLQALPKEI 416



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 74/195 (37%), Positives = 108/195 (55%), Gaps = 4/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+    +L ++ VL + +NQLK LP   G L  L+VL +S N L++LPK I   + L+E
Sbjct: 182 IPKEF-GKLKSLQVLYLSNNQLKTLPKEFGDLKSLQVLYLSNNQLKTLPKEIRKLKKLQE 240

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+L+ LP  IG +L NL+ L ++ N++  LP+    L SL+ L      L + P 
Sbjct: 241 LALYNNQLKTLPKEIG-KLQNLQVLGLSYNQLKKLPKEFGKLKSLQKLYLSNYQLTTFPN 299

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L NL  L +S N   L T P  IG L +L EL +S N++  LP  I  L+ LQ L 
Sbjct: 300 EIGELQNLTELYLSNN--QLTTFPNEIGELQNLTELYLSNNQLQALPKKIEKLKNLQVLI 357

Query: 182 LEGNPLVSPPMDVVE 196
           L  N L + P ++ E
Sbjct: 358 LNNNQLTTIPNEIGE 372



 Score = 94.4 bits (233), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 103/179 (57%), Gaps = 3/179 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL +  NQLK LP   G L  L+ L +S   L + P  I   ++L EL  + N
Sbjct: 256 GKLQNLQVLGLSYNQLKKLPKEFGKLKSLQKLYLSNYQLTTFPNEIGELQNLTELYLSNN 315

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L   P+ IG EL NL  L ++ N++  LP+ +  L +L+VL    N L ++P ++  L 
Sbjct: 316 QLTTFPNEIG-ELQNLTELYLSNNQLQALPKKIEKLKNLQVLILNNNQLTTIPNEIGELK 374

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           NL+VL ++ N   L T+P  IG L +L EL++S N++  LP  IG L+ LQ+L L+  P
Sbjct: 375 NLQVLTLNNN--QLTTIPNEIGELKNLRELNLSRNQLQALPKEIGHLKNLQELYLDDIP 431



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 90/164 (54%), Gaps = 9/164 (5%)

Query: 33  LSKLKVLD--VSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINC 90
           LS+LK  +  +  NL E+L    +N   ++ L  N N+L  LP  IG +L  L+ L    
Sbjct: 76  LSQLKAEEKRIYHNLTEAL----QNPTDVQILYLNSNQLITLPKEIG-KLKKLRELHSYN 130

Query: 91  NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL 150
           N++  +P+ +  L +L+ LD   N LK++P+++  L NL+ L +  N   L+T+P   G 
Sbjct: 131 NQLKAIPKEIGKLQNLQKLDLNHNQLKTIPKEIGKLQNLQELGLIGN--QLKTIPKEFGK 188

Query: 151 LMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L SL  L +S N++ TLP   G L+ LQ L L  N L + P ++
Sbjct: 189 LKSLQVLYLSNNQLKTLPKEFGDLKSLQVLYLSNNQLKTLPKEI 232



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 87/172 (50%), Gaps = 20/172 (11%)

Query: 31  GCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD----TIGFELINLKTL 86
             L K++ L     LL  +  T+EN RS+ + + +  KL Q+ +       F+  N +  
Sbjct: 4   ASLQKIRTL-----LLGHIKMTLENKRSVLQKHNSSQKLSQIENPRLFRGKFQHSNFRNK 58

Query: 87  SI----NCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
            I    +C ++VIL   L  L+ L+  + R+    +L E L+N  ++++L ++ N   L 
Sbjct: 59  FIIVFHSCVRVVIL---LCFLSQLKAEEKRI--YHNLTEALQNPTDVQILYLNSN--QLI 111

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           TLP  IG L  L EL    N++  +P  IG L+ LQKL L  N L + P ++
Sbjct: 112 TLPKEIGKLKKLRELHSYNNQLKAIPKEIGKLQNLQKLDLNHNQLKTIPKEI 163


>gi|410939257|ref|ZP_11371091.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
 gi|410785676|gb|EKR74633.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
          Length = 288

 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 112/189 (59%), Gaps = 3/189 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L +++N++  LP+ IG L  L+VL ++ N LE++PK I N ++L+EL+  +N
Sbjct: 70  GNLKNLKELSLNTNEITTLPSEIGNLKNLQVLSLNVNRLETIPKEIGNLKNLKELSIEWN 129

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL+ LP  IG  L NLK L ++ N++ +LPQ + +L  L+ +    N L  LP++++NL 
Sbjct: 130 KLKTLPKEIG-NLKNLKELYLSRNQLKVLPQEIWNLKKLQRIHLSTNELTKLPQEIKNLE 188

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L  + +  N     TLP  IG L +L  L +  N++ +LP  IG L+ L++L LE N L
Sbjct: 189 GLIEIYLHDN--QFTTLPKEIGNLKNLHNLVLGRNQLISLPPEIGNLKNLKELYLEENQL 246

Query: 188 VSPPMDVVE 196
              P  + +
Sbjct: 247 TKLPKQIAD 255



 Score =  101 bits (251), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 102/178 (57%), Gaps = 3/178 (1%)

Query: 17  DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTI 76
           D   N LK LP  IG L  LK L ++ N + +LP  I N ++L+ L+ N N+L  +P  I
Sbjct: 56  DNEENPLKTLPKEIGNLKNLKELSLNTNEITTLPSEIGNLKNLQVLSLNVNRLETIPKEI 115

Query: 77  GFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQ 136
           G  L NLK LSI  NK+  LP+ + +L +L+ L    N LK LP+++ NL  L+ +++S 
Sbjct: 116 G-NLKNLKELSIEWNKLKTLPKEIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQRIHLST 174

Query: 137 NFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           N   L  LP  I  L  L+E+ +  N+ TTLP  IG L+ L  L L  N L+S P ++
Sbjct: 175 N--ELTKLPQEIKNLEGLIEIYLHDNQFTTLPKEIGNLKNLHNLVLGRNQLISLPPEI 230


>gi|417786460|ref|ZP_12434151.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409950393|gb|EKO04921.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 305

 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 128/220 (58%), Gaps = 8/220 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL++++NQLK  P  IG L  L  L ++ N L +L K I   ++L+EL  N+N
Sbjct: 86  GQLENLRVLELNNNQLKTFPKEIGQLKNLLALYLNNNQLMTLSKGIGQLKNLQELYLNYN 145

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+ L +N N++  L + +  L +L+ LD   N  K +P ++E L 
Sbjct: 146 QLTILPNEIG-QLKNLQALELNNNQLKTLSKEIGQLKNLQRLDLGYNQFKIIPNEIEQLQ 204

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+VL ++ N   L TL   IG L +L EL +SYN++T LP+ IG L+ LQ L L  N L
Sbjct: 205 NLQVLELNNN--QLTTLSKEIGRLQNLQELYLSYNQLTILPNEIGQLKNLQVLELNNNQL 262

Query: 188 VSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
            +   ++       +K     +++N+  S ++K  + KL+
Sbjct: 263 KTLSKEI-----GQLKNLKRLELDNNQLSSEEKERIRKLL 297


>gi|418730631|ref|ZP_13289125.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774840|gb|EKR54844.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 595

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 108/184 (58%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++   +L  LP  IG L  L+ L++  NLL +LPK I    +L+EL+   N+L 
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
             P  I  EL  L++L ++ N+++ILP  +  L +L+ L    N L + P+++  L NL+
Sbjct: 108 TFPAVI-VELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +S+N   L  LP  IG L +L  LD+  N+ T LP  IG L+ LQ L+L+ N L + 
Sbjct: 167 KLWLSEN--RLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATL 224

Query: 191 PMDV 194
           P+++
Sbjct: 225 PVEI 228



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/170 (38%), Positives = 95/170 (55%), Gaps = 3/170 (1%)

Query: 25  CLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLK 84
            LP  I  L  LK L +  N L+ +P  I   R+LE LN   N+L +LP  IG +L NL+
Sbjct: 390 TLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIG-QLRNLQ 448

Query: 85  TLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
            LS++ N + I P  +  L  L+ LD  +N   + P+++  L NL+ LN+ +N   L  L
Sbjct: 449 RLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN--QLTNL 506

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P  I  L +L ELD++ N+ T LP  IG L+KLQ L L  N L + P ++
Sbjct: 507 PAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 104/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQL   P  I  L KL+ LD+S N L  LP  I   ++L++L    N
Sbjct: 91  GQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKN 150

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL   P  IG +L NL+ L ++ N++  LP+ +  L +L+ LD + N    LP+++  L 
Sbjct: 151 KLTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQ 209

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+  N   L TLP  IG L +L EL +  N++T LP  IG L+ LQ L    N L
Sbjct: 210 NLQTLNLQDN--QLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRL 267

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 268 TALPKEM 274



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 102/178 (57%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +RL N+  L +  N LK +P+ IG L  L+ L++  N LE LPK I   R+L+ L+ + N
Sbjct: 396 SRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQN 455

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+  P  I  +L  L+ L ++ N+    P+ +  L +L+ L+ + N L +LP ++E L 
Sbjct: 456 TLKIFPAEIE-QLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLK 514

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ L+++ N      LP  IG L  L  LD+  N++TTLP  IG L+ LQ L L+ N
Sbjct: 515 NLQELDLNDN--QFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 570



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 101/179 (56%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  N+L  LPN IG L  L+ L +  N L + PK I   ++L++L  + N+L  LP  
Sbjct: 122 LDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKE 181

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL+TL +  N+  ILP+ +  L +L+ L+ + N L +LP ++  L NL+ L + 
Sbjct: 182 IG-QLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLR 240

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L  LP  IG L +L  L    N++T LP  +G L+ LQ L+L  N L   P ++
Sbjct: 241 NN--RLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEI 297



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 102/180 (56%), Gaps = 3/180 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  L ++ N+L   P  IG L  L+ L +S N L +LPK I   ++L+ L+   N
Sbjct: 137 GRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNN 196

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP  IG +L NL+TL++  N++  LP  +  L +L+ L  R N L  LP+++  L 
Sbjct: 197 QFTILPKEIG-QLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQ 255

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L   +N   L  LP  +G L +L  L++  N++T LP  IG L+ LQ L L  NPL
Sbjct: 256 NLQMLCSPEN--RLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPL 313



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 108/197 (54%), Gaps = 9/197 (4%)

Query: 4   ESLTA------RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCR 57
           E LTA      +L N+  L++  N L  LP  IG L  L+ LD+  N L + P  I   +
Sbjct: 58  EKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQ 117

Query: 58  SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK 117
            LE L+ + N+L  LP+ IG  L NL+ L +  NK+   P+ +  L +L+ L    N L 
Sbjct: 118 KLESLDLSENRLIILPNEIG-RLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLT 176

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
           +LP+++  L NL+ L++ QN Q+   LP  IG L +L  L++  N++ TLP  IG L+ L
Sbjct: 177 ALPKEIGQLKNLQTLDL-QNNQF-TILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNL 234

Query: 178 QKLSLEGNPLVSPPMDV 194
           Q+L L  N L   P ++
Sbjct: 235 QELYLRNNRLTVLPKEI 251



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/178 (34%), Positives = 99/178 (55%), Gaps = 8/178 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  N+L  LP  IG L  L+ LD+  N    LPK I   ++L+ LN   N
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDN 219

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +  N++ +LP+ +  L +L++L +  N L +LP+++  L 
Sbjct: 220 QLATLPVEIG-QLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLK 278

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ LN+  N   L  LP  IG L +L +L++  N     P S+   +++QKL  + N
Sbjct: 279 NLQTLNLVNN--RLTVLPKEIGQLQNLQDLELLMN-----PLSLKERKRIQKLFPDSN 329



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 126/309 (40%), Gaps = 88/309 (28%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L    N+L  LP  +G L  L+ L++  N L  LPK I   ++L++L    N
Sbjct: 252 GQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMN 311

Query: 68  KL---------RQLPDT------------------------------------------I 76
            L         +  PD+                                          +
Sbjct: 312 PLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKV 371

Query: 77  GFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQ 136
             +  NL+ L +       LP+ ++ L +L+ L   LN LK +P ++  L NLE LN+  
Sbjct: 372 ILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEA 431

Query: 137 NFQYLETLPYSIGLLMS-----------------------LVELDVSYNKITTLPDSIGC 173
           N   LE LP  IG L +                       L +LD+S N+ TT P  IG 
Sbjct: 432 N--ELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGK 489

Query: 174 LRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKS--PKKKSWVGKLVKYGT 231
           L  LQ L+L+ N L + P ++       +K      +N++  +  PK+   +GKL K  T
Sbjct: 490 LENLQTLNLQRNQLTNLPAEI-----EQLKNLQELDLNDNQFTVLPKE---IGKLKKLQT 541

Query: 232 FNGALRNHR 240
            +  LRN++
Sbjct: 542 LD--LRNNQ 548



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L + L+N +++ VLN+S   + L  LP  IG L +L EL++ +N +TTLP  IG L  
Sbjct: 38  RDLTKALQNPLDVRVLNLS--GEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLEN 95

Query: 177 LQKLSLEGNPLVSPPMDVVE 196
           LQ+L L  N L + P  +VE
Sbjct: 96  LQELDLRDNQLATFPAVIVE 115


>gi|260812952|ref|XP_002601184.1| hypothetical protein BRAFLDRAFT_214669 [Branchiostoma floridae]
 gi|229286475|gb|EEN57196.1| hypothetical protein BRAFLDRAFT_214669 [Branchiostoma floridae]
          Length = 865

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/201 (34%), Positives = 109/201 (54%), Gaps = 3/201 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL  +  L++ SN L+ LP  +G L+ +K LD+S   L +LP  +     LE L   +N
Sbjct: 117 CRLKQLEWLNLSSNPLQTLPAEVGQLTNVKHLDLSCCQLNTLPPEVGRLTKLEWLYLCYN 176

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G +L N+K L+++  ++  LP  +  LT L  LD   N L++LP ++  L 
Sbjct: 177 PLQTLPTEVG-QLNNVKQLNLSLCELHTLPPEVWRLTQLEWLDLSSNPLQTLPAEVGQLT 235

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           N++ L +S     L TLP  +G L  L  L++  N +  LP  +G L     L +  NPL
Sbjct: 236 NVKHLGLSHC--QLRTLPPEVGRLTQLEWLNLRSNPLQALPAEVGQLPNKANLDVSENPL 293

Query: 188 VSPPMDVVEQGLSAVKGYLSE 208
           + PP +V  QG++A++ Y  E
Sbjct: 294 IKPPPEVCSQGVTAIRRYFDE 314



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 82/157 (52%), Gaps = 3/157 (1%)

Query: 26  LPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKT 85
           LP+ +  L+ + VL +    L ++P  +     LEEL+ ++N+   LP  +   L N++ 
Sbjct: 43  LPDELYKLNNIIVLSLRQCELGTVPPAVLKLSQLEELDLSWNRGIHLPKELS-GLANIRV 101

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L +    +  +P  +  L  L  L+   N L++LP ++  L N++ L++S     L TLP
Sbjct: 102 LKLWGTDMATVPMVMCRLKQLEWLNLSSNPLQTLPAEVGQLTNVKHLDLS--CCQLNTLP 159

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
             +G L  L  L + YN + TLP  +G L  +++L+L
Sbjct: 160 PEVGRLTKLEWLYLCYNPLQTLPTEVGQLNNVKQLNL 196



 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 2/75 (2%)

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
           SLP++L  L N+ VL++ Q    L T+P ++  L  L ELD+S+N+   LP  +  L  +
Sbjct: 42  SLPDELYKLNNIIVLSLRQC--ELGTVPPAVLKLSQLEELDLSWNRGIHLPKELSGLANI 99

Query: 178 QKLSLEGNPLVSPPM 192
           + L L G  + + PM
Sbjct: 100 RVLKLWGTDMATVPM 114


>gi|418755283|ref|ZP_13311490.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964294|gb|EKO32184.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 557

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 107/187 (57%), Gaps = 3/187 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L +  NQL  LP  IG L  L+ L +S N L +LP+ I   + L+ LN + N+
Sbjct: 335 KLQNLKWLYLDDNQLTVLPQEIGQLENLESLILSNNQLTTLPQEIGTLQKLQYLNLSNNQ 394

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           LR LP  IG  L  L+ L++  N++  LPQ +  L +L  L    N LK+LP+++  L  
Sbjct: 395 LRTLPQEIGT-LQELEWLNLEHNQLAALPQEIDQLQNLEDLILSNNRLKTLPKEIWKLRK 453

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           LE L +  N   L +LP  I  L +L  LD+S N++ TLP+ IG L+ L+ L L GNP  
Sbjct: 454 LEWLYLKNN--KLGSLPKEIDQLQNLEYLDLSNNQLRTLPNEIGQLQSLEDLDLSGNPFA 511

Query: 189 SPPMDVV 195
           + P ++V
Sbjct: 512 TFPKEIV 518



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/194 (36%), Positives = 115/194 (59%), Gaps = 4/194 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +  +L  + VL + +N+L  LP  IG L +L+ L +  N L++LP+ I   ++L+
Sbjct: 236 VLPQEI-GKLQKLEVLCLKNNKLGSLPQEIGTLRRLRFLSLVNNRLKTLPREIWKLQNLK 294

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L    N+ R LP  I  +L NL+ L ++ N++V LP  +  L +L+ L    N L  LP
Sbjct: 295 DLYLGDNQFRTLPKEID-QLQNLEGLDVSNNQLVTLPNEIWKLQNLKWLYLDDNQLTVLP 353

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++  L NLE L +S N   L TLP  IG L  L  L++S N++ TLP  IG L++L+ L
Sbjct: 354 QEIGQLENLESLILSNN--QLTTLPQEIGTLQKLQYLNLSNNQLRTLPQEIGTLQELEWL 411

Query: 181 SLEGNPLVSPPMDV 194
           +LE N L + P ++
Sbjct: 412 NLEHNQLAALPQEI 425



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 102/179 (56%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L + +NQL  LP  IG L KL+VL +  N L SLP+ I   R L  L+   N+L+ LP  
Sbjct: 227 LSLENNQLTVLPQEIGKLQKLEVLCLKNNKLGSLPQEIGTLRRLRFLSLVNNRLKTLPRE 286

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           I ++L NLK L +  N+   LP+ +  L +L  LD   N L +LP ++  L NL+ L + 
Sbjct: 287 I-WKLQNLKDLYLGDNQFRTLPKEIDQLQNLEGLDVSNNQLVTLPNEIWKLQNLKWLYLD 345

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L  LP  IG L +L  L +S N++TTLP  IG L+KLQ L+L  N L + P ++
Sbjct: 346 DN--QLTVLPQEIGQLENLESLILSNNQLTTLPQEIGTLQKLQYLNLSNNQLRTLPQEI 402



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 100/171 (58%), Gaps = 4/171 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +  +L N+  L + +NQL  LP  IG L KL+ L++S N L +LP+ I   + LE
Sbjct: 351 VLPQEI-GQLENLESLILSNNQLTTLPQEIGTLQKLQYLNLSNNQLRTLPQEIGTLQELE 409

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            LN   N+L  LP  I  +L NL+ L ++ N++  LP+ +  L  L  L  + N L SLP
Sbjct: 410 WLNLEHNQLAALPQEID-QLQNLEDLILSNNRLKTLPKEIWKLRKLEWLYLKNNKLGSLP 468

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           ++++ L NLE L++S N   L TLP  IG L SL +LD+S N   T P  I
Sbjct: 469 KEIDQLQNLEYLDLSNN--QLRTLPNEIGQLQSLEDLDLSGNPFATFPKEI 517



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 99/178 (55%), Gaps = 3/178 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           +NV +LD+  NQL  LPN IG L  L+ L++  N L  L + I   + LE L+   N+L 
Sbjct: 38  MNVRILDLSDNQLATLPNEIGKLENLEKLNLVNNQLSVLVQEIGTLQKLEWLSLKNNRLE 97

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ IG +L  L+ L++  N++ +L Q +  L  L  L  + N L+SLP  +  L  LE
Sbjct: 98  SLPNKIG-KLRKLEHLNLENNQLAVLVQEIGTLQKLEWLSLKNNRLESLPNKIGKLRKLE 156

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
            LN+  N   L  L   IG L  L  L +  N++ +LP+ IG LRKL+ L+LE N L 
Sbjct: 157 HLNLEHN--QLAVLVQEIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLEHNQLA 212



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 100/187 (53%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++ +NQL  L   IG L KL+ L +  N LESLP  I   R LE LN   N
Sbjct: 58  GKLENLEKLNLVNNQLSVLVQEIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLENN 117

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  L   IG  L  L+ LS+  N++  LP  +  L  L  L+   N L  L +++  L 
Sbjct: 118 QLAVLVQEIGT-LQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLEHNQLAVLVQEIGTLQ 176

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE+LP  IG L  L  L++ +N++  L   IG L+KL+ LSLE N L
Sbjct: 177 KLEWLSLKNN--RLESLPNKIGKLRKLEHLNLEHNQLAVLVQEIGTLQKLEWLSLENNQL 234

Query: 188 VSPPMDV 194
              P ++
Sbjct: 235 TVLPQEI 241



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/179 (35%), Positives = 96/179 (53%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L + +N+L+ LPN IG L KL+ L++  N L  L + I   + LE L+   N+L  LP+ 
Sbjct: 135 LSLKNNRLESLPNKIGKLRKLEHLNLEHNQLAVLVQEIGTLQKLEWLSLKNNRLESLPNK 194

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L  L+ L++  N++ +L Q +  L  L  L    N L  LP+++  L  LEVL + 
Sbjct: 195 IG-KLRKLEHLNLEHNQLAVLVQEIGTLQKLEWLSLENNQLTVLPQEIGKLQKLEVLCLK 253

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L +LP  IG L  L  L +  N++ TLP  I  L+ L+ L L  N   + P ++
Sbjct: 254 NN--KLGSLPQEIGTLRRLRFLSLVNNRLKTLPREIWKLQNLKDLYLGDNQFRTLPKEI 310



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 69/135 (51%), Gaps = 8/135 (5%)

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
           +L +  ++R+LD   N L +LP ++  L NLE LN+  N   L  L   IG L  L  L 
Sbjct: 33  ALKNPMNVRILDLSDNQLATLPNEIGKLENLEKLNLVNN--QLSVLVQEIGTLQKLEWLS 90

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPK 218
           +  N++ +LP+ IG LRKL+ L+LE N L    + V E G      +LS K N     P 
Sbjct: 91  LKNNRLESLPNKIGKLRKLEHLNLENNQLA---VLVQEIGTLQKLEWLSLKNNRLESLPN 147

Query: 219 KKSWVGKLVKYGTFN 233
           K   +GKL K    N
Sbjct: 148 K---IGKLRKLEHLN 159


>gi|456969346|gb|EMG10380.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 598

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 107/184 (58%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           LNV VL++   +L  LP  IG L  L+ L++  NLL +LPK I    +L+EL+   N+L 
Sbjct: 48  LNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
             P  I  EL  L++L ++ N+++ILP  +  L +L+ L    N L + P+++  L NL+
Sbjct: 108 TFPAVI-VELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +S+N   L  LP  IG L +L  LD+  N+ T LP  IG L+ LQ L+L  N L + 
Sbjct: 167 KLWLSEN--RLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATL 224

Query: 191 PMDV 194
           P+++
Sbjct: 225 PVEI 228



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 102/183 (55%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L+++      LP  I  L  LK L +  N L+++P  I   ++LE LN   N+L +
Sbjct: 377 NLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELER 436

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ LS++ N + I P  +  L  L+ LD  +N   + P+++  L NL+ 
Sbjct: 437 LPKEIG-QLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQT 495

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LN+ +N   L  L   IG L +L ELD++ N+ T LP  IG L+KLQ L L  N L + P
Sbjct: 496 LNLQRN--QLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP 553

Query: 192 MDV 194
            ++
Sbjct: 554 TEI 556



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 104/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQL   P  I  L KL+ LD+S N L  LP  I   ++L++L    N
Sbjct: 91  GQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKN 150

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL   P  IG +L NL+ L ++ N++  LP+ +  L +L+ LD + N    LP+++  L 
Sbjct: 151 KLTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQ 209

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+S N   L TLP  IG L +L +L +  N++T  P  IG L+ LQ L    N L
Sbjct: 210 NLQTLNLSDN--QLATLPVEIGQLQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPENRL 267

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 268 TALPKEM 274



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 106/197 (53%), Gaps = 9/197 (4%)

Query: 4   ESLTA------RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCR 57
           E LTA      +L N+  L++  N L  LP  IG L  L+ LD+  N L + P  I   +
Sbjct: 58  EKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQ 117

Query: 58  SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK 117
            LE L+ + N+L  LP+ IG  L NL+ L +  NK+   P+ +  L +L+ L    N L 
Sbjct: 118 KLESLDLSENRLIILPNEIG-RLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLT 176

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
           +LP+++  L NL+ L++  N      LP  IG L +L  L++S N++ TLP  IG L+ L
Sbjct: 177 ALPKEIGQLKNLQTLDLQDN--QFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNL 234

Query: 178 QKLSLEGNPLVSPPMDV 194
           QKL L  N L   P ++
Sbjct: 235 QKLYLRNNRLTVFPKEI 251



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 102/180 (56%), Gaps = 3/180 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +RL N+  L +  N LK +P+ IG L  L+ L++  N LE LPK I   R+L++L+ + N
Sbjct: 396 SRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQN 455

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+  P  I  +L  L+ L ++ N+    P+ +  L +L+ L+ + N L +L  ++  L 
Sbjct: 456 TLKIFPAEIE-QLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQ 514

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L+++ N      LP  IG L  L  LD+  N++TTLP  IG L+ LQ L L+ N L
Sbjct: 515 NLQELDLNDN--QFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQL 572



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 96/173 (55%), Gaps = 8/173 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  N+L  LP  IG L  L+ LD+  N    LPK I   ++L+ LN + N
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDN 219

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +  N++ + P+ +  L +L++L +  N L +LP+++  L 
Sbjct: 220 QLATLPVEIG-QLQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQ 278

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           NL+ LN+  N   L   P  IG L +L +L++  N     P S+   +++QKL
Sbjct: 279 NLQTLNLVNN--RLTVFPKEIGQLQNLQDLELLMN-----PLSLKERKRIQKL 324



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 103/238 (43%), Gaps = 53/238 (22%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L    N+L  LP  +G L  L+ L++  N L   PK I   ++L++L    N
Sbjct: 252 GQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMN 311

Query: 68  KL---------RQLPDT------------------------IGFEL-INLKTLSINCNKI 93
            L         +  PD+                          FEL +  K  S +  K+
Sbjct: 312 PLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKV 371

Query: 94  VI-----------------LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQ 136
           ++                 LP+ ++ L +L+ L   LN LK++P ++  L NLE LN+  
Sbjct: 372 ILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEA 431

Query: 137 NFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           N   LE LP  IG L +L +L +  N +   P  I  L+KLQKL L  N   + P ++
Sbjct: 432 N--ELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEI 487



 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 2/79 (2%)

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
            L + L+N +N+ VLN+S   + L  LP  IG L +L EL++ +N +TTLP  IG L  L
Sbjct: 39  DLTKALQNPLNVRVLNLS--GEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENL 96

Query: 178 QKLSLEGNPLVSPPMDVVE 196
           Q+L L  N L + P  +VE
Sbjct: 97  QELDLRDNQLATFPAVIVE 115



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +  ++RVL+     L +LP+++  L NL+ LN+  N   L TLP  IG L +L 
Sbjct: 40  LTKALQNPLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNL--LTTLPKEIGQLENLQ 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           ELD+  N++ T P  I  L+KL+ L L  N L+  P ++
Sbjct: 98  ELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEI 136


>gi|421129336|ref|ZP_15589537.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410359532|gb|EKP06630.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 288

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/232 (37%), Positives = 127/232 (54%), Gaps = 11/232 (4%)

Query: 17  DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTI 76
           D   N LK LP  IG L  LK L ++ N + +LP  I N ++L+ L+ N N+L  +P  I
Sbjct: 56  DNEDNPLKTLPKEIGNLKNLKELSLNTNEITTLPSEIGNLKNLQVLSLNVNRLETIPKEI 115

Query: 77  GFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQ 136
           G  L NLK LSI  NK+  LP+ + +L +L+ L    N LK LP+++ NL  L+ +++S 
Sbjct: 116 G-NLKNLKELSIGLNKLKTLPKEIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQSMHLST 174

Query: 137 NFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           N   L  LP  I  L  L+E+ +  N+ TTLP  IG L+ L+ L L  N L+S P ++  
Sbjct: 175 N--ELTKLPQEIKNLEGLIEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLPSEI-- 230

Query: 197 QGLSAVKG-YLSEKMNNDHKSPKKKSWVGKLVKYGTFNGALRNHRSEERERF 247
             L  +K  YL E  N   K PK+ + + KL +  +  G      SEE+ER 
Sbjct: 231 GNLKNLKELYLEE--NQLTKLPKQIAALKKLSRL-SLEG--NQFPSEEKERI 277



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 110/188 (58%), Gaps = 3/188 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L +++N++  LP+ IG L  L+VL ++ N LE++PK I N ++L+EL+   N
Sbjct: 70  GNLKNLKELSLNTNEITTLPSEIGNLKNLQVLSLNVNRLETIPKEIGNLKNLKELSIGLN 129

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL+ LP  IG  L NLK L ++ N++ +LPQ + +L  L+ +    N L  LP++++NL 
Sbjct: 130 KLKTLPKEIG-NLKNLKELYLSRNQLKVLPQEIWNLKKLQSMHLSTNELTKLPQEIKNLE 188

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L  + +  N     TLP  IG L +L  L +  N++ +LP  IG L+ L++L LE N L
Sbjct: 189 GLIEIYLYDN--QFTTLPKEIGNLKNLRNLVLGRNQLISLPSEIGNLKNLKELYLEENQL 246

Query: 188 VSPPMDVV 195
              P  + 
Sbjct: 247 TKLPKQIA 254


>gi|440789613|gb|ELR10919.1| SAM domain (Sterile alpha motif) domain containing protein
           [Acanthamoeba castellanii str. Neff]
          Length = 979

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/181 (38%), Positives = 104/181 (57%), Gaps = 4/181 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  +  L ++ N L+ LPN +G L+ L +LD+  N L  LP TI++   L +L   +N
Sbjct: 559 GKLTKLKALGLNENSLRTLPNELGQLTSLTMLDLRYNKLTELPATIKHLVHLNKLFLRYN 618

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L QLP+ IG  L++L+ LS+  N++  LP+ L+  T+L++LD   N L      +E L 
Sbjct: 619 RLEQLPEEIGC-LVSLEMLSVRNNQLHKLPRKLSMATNLKILDISTNHLTKF-RSVEKLC 676

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L++ QN   L TLP   G L  L+ LDVS NK+   P +I  L +L+ L LE N L
Sbjct: 677 QLKDLDLKQN--KLTTLPDGWGALTDLMRLDVSQNKLEEFPVTITELPRLETLDLEANQL 734

Query: 188 V 188
            
Sbjct: 735 T 735



 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 104/185 (56%), Gaps = 4/185 (2%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+ VL+++ N+++ LP  +G L+KLK L ++ N L +LP  +    SL  L+  +NKL +
Sbjct: 540 NLSVLNLYMNKIESLPPDLGKLTKLKALGLNENSLRTLPNELGQLTSLTMLDLRYNKLTE 599

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP TI   L++L  L +  N++  LP+ +  L SL +L  R N L  LP  L    NL++
Sbjct: 600 LPATIKH-LVHLNKLFLRYNRLEQLPEEIGCLVSLEMLSVRNNQLHKLPRKLSMATNLKI 658

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L+IS N     T   S+  L  L +LD+  NK+TTLPD  G L  L +L +  N L   P
Sbjct: 659 LDISTNHL---TKFRSVEKLCQLKDLDLKQNKLTTLPDGWGALTDLMRLDVSQNKLEEFP 715

Query: 192 MDVVE 196
           + + E
Sbjct: 716 VTITE 720



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 105/223 (47%), Gaps = 45/223 (20%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  N+L  LP+  G L+ L  LDVS N LE  P TI     LE L+   N+L  L   
Sbjct: 681 LDLKQNKLTTLPDGWGALTDLMRLDVSQNKLEEFPVTITELPRLETLDLEANQLTVLAPE 740

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  + +L++L +  NK++ LP  L  LT LR L  + N LK++P +L  L+NL+ L++S
Sbjct: 741 IG-NMTSLRSLYLGRNKLIALPAELGMLTGLRELHLKGNRLKAIPPELSALVNLKHLDLS 799

Query: 136 QN-FQ-------------------------------------------YLETLPYSIGLL 151
            N FQ                                            L+ LP  I LL
Sbjct: 800 TNEFQTFPDARCFPPALNSLNMSDNQMKRLSNQIGALTTLKQLNLDENQLDRLPGEISLL 859

Query: 152 MSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             L EL V YN++ TLP  IG +  +++L LE N +V  P  +
Sbjct: 860 TGLTELRVGYNELLTLPHEIGDISLIKQLHLEHNKMVELPKSI 902



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 93/175 (53%), Gaps = 3/175 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  LP  +G L+ L+ L + GN L+++P  +    +L+ L+ + N+ +  PD   F  
Sbjct: 755 NKLIALPAELGMLTGLRELHLKGNRLKAIPPELSALVNLKHLDLSTNEFQTFPDARCFPP 814

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
             L +L+++ N++  L   +  LT+L+ L+   N L  LP ++  L  L  L +   +  
Sbjct: 815 A-LNSLNMSDNQMKRLSNQIGALTTLKQLNLDENQLDRLPGEISLLTGLTELRVG--YNE 871

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
           L TLP+ IG +  + +L + +NK+  LP SIG L  L+   +  N L   P ++V
Sbjct: 872 LLTLPHEIGDISLIKQLHLEHNKMVELPKSIGNLSALELFVVTDNLLNDLPNEMV 926



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 74/133 (55%), Gaps = 3/133 (2%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L++  NQ+K L N IG L+ LK L++  N L+ LP  I     L EL   +N+L  LP  
Sbjct: 819 LNMSDNQMKRLSNQIGALTTLKQLNLDENQLDRLPGEISLLTGLTELRVGYNELLTLPHE 878

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG ++  +K L +  NK+V LP+S+ +L++L +     N L  LP ++ N+ +L  L + 
Sbjct: 879 IG-DISLIKQLHLEHNKMVELPKSIGNLSALELFVVTDNLLNDLPNEMVNMTSLSELKVD 937

Query: 136 QNFQYLETLPYSI 148
            N    + LP ++
Sbjct: 938 GN--PFDNLPAAV 948



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 69/120 (57%), Gaps = 3/120 (2%)

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  + +E+ NL  L++  NKI  LP  L  LT L+ L    N L++LP +L  L 
Sbjct: 527 ELTAVPSNV-WEMKNLSVLNLYMNKIESLPPDLGKLTKLKALGLNENSLRTLPNELGQLT 585

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L +L++   +  L  LP +I  L+ L +L + YN++  LP+ IGCL  L+ LS+  N L
Sbjct: 586 SLTMLDL--RYNKLTELPATIKHLVHLNKLFLRYNRLEQLPEEIGCLVSLEMLSVRNNQL 643



 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 7/94 (7%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L  +  L V  N+L  LP+ IG +S +K L +  N +  LPK+I N  +LE      N L
Sbjct: 859 LTGLTELRVGYNELLTLPHEIGDISLIKQLHLEHNKMVELPKSIGNLSALELFVVTDNLL 918

Query: 70  RQLPDTIGFELINLKTLS---INCNKIVILPQSL 100
             LP+    E++N+ +LS   ++ N    LP ++
Sbjct: 919 NDLPN----EMVNMTSLSELKVDGNPFDNLPAAV 948


>gi|28302239|gb|AAH46591.1| Lrrc1 protein, partial [Mus musculus]
          Length = 596

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/214 (36%), Positives = 116/214 (54%), Gaps = 23/214 (10%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 192 LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 250

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 251 LDLGNNEIYNLPESIG-ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPE 309

Query: 122 DLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELDVS 160
           ++  L +L  L ISQN                        L  LP +IG   +L EL ++
Sbjct: 310 EISGLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLT 369

Query: 161 YNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N++ TLP SIG L+KL  L+ + N LVS P ++
Sbjct: 370 ENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI 403



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 107/195 (54%), Gaps = 7/195 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   AR L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L
Sbjct: 99  VPEEIYRYARSLEELLLD--ANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQL 156

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP+S   L +L  L      L+SL
Sbjct: 157 VELDVSRNDIPEIPESIAF-CKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 215

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++ NL NL  L + +N   L  LP S+  L  L ELD+  N+I  LP+SIG L  L+ 
Sbjct: 216 PENIGNLYNLASLELRENL--LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKD 273

Query: 180 LSLEGNPLVSPPMDV 194
           L L+GN L   P ++
Sbjct: 274 LWLDGNQLSELPQEI 288



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 99/187 (52%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L+V D SGN L  LP++    ++L  L+ N  
Sbjct: 151 ANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDI 210

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD   N + +LPE +  L+
Sbjct: 211 SLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALL 269

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L +  N   L  LP  IG L +L+ LDVS N++  LP+ I  L  L  L +  N L
Sbjct: 270 HLKDLWLDGN--QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLL 327

Query: 188 VSPPMDV 194
            + P  +
Sbjct: 328 ETIPEGI 334



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 104/188 (55%), Gaps = 7/188 (3%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N++ LDV  N+L+ LP  I  L+ L  L +S NLLE++P+ I   + L  L  + N+L
Sbjct: 291 LKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRL 350

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            QLP+ IG +  NL  L +  N+++ LP+S+  L  L  L+A  N L SLP+++    +L
Sbjct: 351 TQLPEAIG-DCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSL 409

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN---P 186
            +  I  N   L  LP  +   + L  LDV+ N++  LP S+  L KL+ L L  N   P
Sbjct: 410 TMFCIRDN--RLTRLPAEVSQAVELHVLDVAGNRLHHLPLSLTTL-KLKALWLSDNQSQP 466

Query: 187 LVSPPMDV 194
           L++   D+
Sbjct: 467 LLTFQTDI 474



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 84/182 (46%), Gaps = 28/182 (15%)

Query: 14  VVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQL 72
             L V +    C+P    C   ++ +D     L  +P+ I    RSLEEL  + N+LR+L
Sbjct: 65  TALVVEAAMFHCIP-LWRCNRHVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLREL 123

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P+   F+L+ L+ L ++ N+I                       + LP ++ N + L  L
Sbjct: 124 PEQF-FQLVKLRKLGLSDNEI-----------------------QRLPPEIANFMQLVEL 159

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
           ++S+N   +  +P SI    +L   D S N +T LP+S   L+ L  LS+    L S P 
Sbjct: 160 DVSRN--DIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPE 217

Query: 193 DV 194
           ++
Sbjct: 218 NI 219


>gi|417770843|ref|ZP_12418746.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418680944|ref|ZP_13242181.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|400327382|gb|EJO79634.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409947186|gb|EKN97187.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|455665862|gb|EMF31349.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 590

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 108/184 (58%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++   +L  LP  IG L  L+ L++  NLL +LPK I    +L+EL+   N+L 
Sbjct: 43  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 102

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
             P  I  EL  L++L ++ N+++ILP  +  L +L+ L    N L + P+++  L NL+
Sbjct: 103 TFPAVI-VELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQ 161

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +S+N   L  LP  IG L +L  LD+  N+ T LP  IG L+ LQ L+L+ N L + 
Sbjct: 162 KLWLSEN--RLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATL 219

Query: 191 PMDV 194
           P+++
Sbjct: 220 PVEI 223



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/170 (38%), Positives = 95/170 (55%), Gaps = 3/170 (1%)

Query: 25  CLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLK 84
            LP  I  L  LK L +  N L+ +P  I   R+LE LN   N+L +LP  IG +L NL+
Sbjct: 385 TLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIG-QLRNLQ 443

Query: 85  TLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
            LS++ N + I P  +  L  L+ LD  +N   + P+++  L NL+ LN+ +N   L  L
Sbjct: 444 RLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN--QLTNL 501

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P  I  L +L ELD++ N+ T LP  IG L+KLQ L L  N L + P ++
Sbjct: 502 PAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 551



 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 104/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQL   P  I  L KL+ LD+S N L  LP  I   ++L++L    N
Sbjct: 86  GQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKN 145

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL   P  IG +L NL+ L ++ N++  LP+ +  L +L+ LD + N    LP+++  L 
Sbjct: 146 KLTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQ 204

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+  N   L TLP  IG L +L EL +  N++T LP  IG L+ LQ L    N L
Sbjct: 205 NLQTLNLQDN--QLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRL 262

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 263 TALPKEM 269



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 102/178 (57%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +RL N+  L +  N LK +P+ IG L  L+ L++  N LE LPK I   R+L+ L+ + N
Sbjct: 391 SRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQN 450

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+  P  I  +L  L+ L ++ N+    P+ +  L +L+ L+ + N L +LP ++E L 
Sbjct: 451 TLKIFPAEIE-QLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLK 509

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ L+++ N      LP  IG L  L  LD+  N++TTLP  IG L+ LQ L L+ N
Sbjct: 510 NLQELDLNDN--QFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 565



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 101/179 (56%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  N+L  LPN IG L  L+ L +  N L + PK I   ++L++L  + N+L  LP  
Sbjct: 117 LDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKE 176

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL+TL +  N+  ILP+ +  L +L+ L+ + N L +LP ++  L NL+ L + 
Sbjct: 177 IG-QLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLR 235

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L  LP  IG L +L  L    N++T LP  +G L+ LQ L+L  N L   P ++
Sbjct: 236 NN--RLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEI 292



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 102/180 (56%), Gaps = 3/180 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  L ++ N+L   P  IG L  L+ L +S N L +LPK I   ++L+ L+   N
Sbjct: 132 GRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNN 191

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP  IG +L NL+TL++  N++  LP  +  L +L+ L  R N L  LP+++  L 
Sbjct: 192 QFTILPKEIG-QLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQ 250

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L   +N   L  LP  +G L +L  L++  N++T LP  IG L+ LQ L L  NPL
Sbjct: 251 NLQMLCSPEN--RLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPL 308



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 108/197 (54%), Gaps = 9/197 (4%)

Query: 4   ESLTA------RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCR 57
           E LTA      +L N+  L++  N L  LP  IG L  L+ LD+  N L + P  I   +
Sbjct: 53  EKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQ 112

Query: 58  SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK 117
            LE L+ + N+L  LP+ IG  L NL+ L +  NK+   P+ +  L +L+ L    N L 
Sbjct: 113 KLESLDLSENRLIILPNEIG-RLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLT 171

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
           +LP+++  L NL+ L++ QN Q+   LP  IG L +L  L++  N++ TLP  IG L+ L
Sbjct: 172 ALPKEIGQLKNLQTLDL-QNNQF-TILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNL 229

Query: 178 QKLSLEGNPLVSPPMDV 194
           Q+L L  N L   P ++
Sbjct: 230 QELYLRNNRLTVLPKEI 246



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/178 (34%), Positives = 99/178 (55%), Gaps = 8/178 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  N+L  LP  IG L  L+ LD+  N    LPK I   ++L+ LN   N
Sbjct: 155 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDN 214

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +  N++ +LP+ +  L +L++L +  N L +LP+++  L 
Sbjct: 215 QLATLPVEIG-QLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLK 273

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ LN+  N   L  LP  IG L +L +L++  N     P S+   +++QKL  + N
Sbjct: 274 NLQTLNLVNN--RLTVLPKEIGQLQNLQDLELLMN-----PLSLKERKRIQKLFPDSN 324



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 98/238 (41%), Gaps = 53/238 (22%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L    N+L  LP  +G L  L+ L++  N L  LPK I   ++L++L    N
Sbjct: 247 GQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMN 306

Query: 68  KL---------RQLPDT------------------------------------------I 76
            L         +  PD+                                          +
Sbjct: 307 PLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKV 366

Query: 77  GFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQ 136
             +  NL+ L +       LP+ ++ L +L+ L   LN LK +P ++  L NLE LN+  
Sbjct: 367 ILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEA 426

Query: 137 NFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           N   LE LP  IG L +L  L +  N +   P  I  L+KLQKL L  N   + P ++
Sbjct: 427 N--ELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEI 482



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L + L+N +++ VLN+S   + L  LP  IG L +L EL++ +N +TTLP  IG L  
Sbjct: 33  RDLTKALQNPLDVRVLNLS--GEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLEN 90

Query: 177 LQKLSLEGNPLVSPPMDVVE 196
           LQ+L L  N L + P  +VE
Sbjct: 91  LQELDLRDNQLATFPAVIVE 110



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVL+     L +LP+++  L NL+ LN+  N   L TLP  IG L +L 
Sbjct: 35  LTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNL--LTTLPKEIGQLENLQ 92

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           ELD+  N++ T P  I  L+KL+ L L  N L+  P ++
Sbjct: 93  ELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEI 131


>gi|195349129|ref|XP_002041099.1| GM15368 [Drosophila sechellia]
 gi|261277895|sp|B4IBI9.1|SUR8_DROSE RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|194122704|gb|EDW44747.1| GM15368 [Drosophila sechellia]
          Length = 683

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 112/191 (58%), Gaps = 4/191 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP S     +++  L ++SN++  LP  IGCL  L+ L ++ N L SLP++++NC  L+
Sbjct: 177 VIP-STVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSLPESLQNCSQLK 235

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKL ++P  I + L +L TL +  N+I  +   L  L +L +L  R N ++ L 
Sbjct: 236 VLDLRHNKLAEIPSVI-YRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELG 294

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             +  L+NL  L++S N  +LE LP  IG  ++L  LD+ +N++  +PDSIG L+ L +L
Sbjct: 295 SAIGALVNLTTLDVSHN--HLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRL 352

Query: 181 SLEGNPLVSPP 191
            +  N L S P
Sbjct: 353 GMRYNRLSSVP 363



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 115/245 (46%), Gaps = 51/245 (20%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +    +N+  LD+  N+L  +P+SIG L  L  L +  N L S+P T++NC+S++E
Sbjct: 316 LPEDI-GNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPATLKNCKSMDE 374

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ------------SLTH------- 102
            N   N + QLPD +   L  L T++++ N+    P             +L H       
Sbjct: 375 FNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIP 434

Query: 103 ---------LTSLRV--------------------LDARLNCLKSLPEDLENLINLEVLN 133
                    LT L +                    L+   N L+ LP+D+ NL NLE+L 
Sbjct: 435 YGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILI 494

Query: 134 ISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMD 193
           +S N   L+ +P +IG L  L  LD+  N+I  LP  IG L +LQ+L L+ N +   P  
Sbjct: 495 LSNNM--LKKIPNTIGNLRRLRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPRS 552

Query: 194 VVEQG 198
           +   G
Sbjct: 553 IGHLG 557



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 97/161 (60%), Gaps = 2/161 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           +N+V L++ +N L+ LP+ I  L  L++L +S N+L+ +P TI N R L  L+   N++ 
Sbjct: 465 VNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIE 524

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG  L  L+ L +  N+I +LP+S+ HL +L  L    N L+ LPE++ +L +LE
Sbjct: 525 VLPHEIGL-LHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLE 583

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
            L I+QN   LE LP+ + L  +L  L++    ++T+P  I
Sbjct: 584 NLYINQN-PGLEKLPFELALCQNLKYLNIDKCPLSTIPPEI 623



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 26/179 (14%)

Query: 36  LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           +K LD+S + +  +P T++ C  L EL    NK+ QLP  IG  L++L+ L++N N +  
Sbjct: 165 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGC-LVSLRNLALNENSLTS 223

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLP-----------------------EDLENLINLEVL 132
           LP+SL + + L+VLD R N L  +P                       +DL  L+NL +L
Sbjct: 224 LPESLQNCSQLKVLDLRHNKLAEIPSVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTML 283

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           ++ +N   +  L  +IG L++L  LDVS+N +  LP+ IG    L  L L+ N L+  P
Sbjct: 284 SLREN--KIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIP 340



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 99/185 (53%), Gaps = 4/185 (2%)

Query: 3   PESLTARLLNVVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEE 61
           P    A+  NV  +++  N++  +P  I   +K L  L++  N+L +LP  I    ++ E
Sbjct: 410 PTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVE 469

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N L++LPD I   L NL+ L ++ N +  +P ++ +L  LR+LD   N ++ LP 
Sbjct: 470 LNLATNALQKLPDDI-MNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIEVLPH 528

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L  L+ L +  N   +  LP SIG L +L  L VS N +  LP+ IG L  L+ L 
Sbjct: 529 EIGLLHELQRLILQTN--QITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLY 586

Query: 182 LEGNP 186
           +  NP
Sbjct: 587 INQNP 591



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 103/188 (54%), Gaps = 4/188 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L+N+ +L +  N+++ L ++IG L  L  LDVS N LE LP+ I NC +L  L+   N+
Sbjct: 276 QLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNE 335

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLI 127
           L  +PD+IG  L +L  L +  N++  +P +L +  S+   +   N +  LP+  L +L 
Sbjct: 336 LLDIPDSIG-NLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLS 394

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNP 186
            L  + +S+N Q+            ++  +++ +N+I  +P  I    K L KL+++ N 
Sbjct: 395 GLTTITLSRN-QFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENM 453

Query: 187 LVSPPMDV 194
           L + P+D+
Sbjct: 454 LTALPLDI 461



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +P+ + A L  +  + +  NQ    P       + +  +++  N ++ +P  I    + L
Sbjct: 385 LPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGL 444

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N L  LP  IG   +N+  L++  N +  LP  + +L +L +L    N LK +
Sbjct: 445 TKLNMKENMLTALPLDIG-TWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKI 503

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  + NL  L +L++ +N   +E LP+ IGLL  L  L +  N+IT LP SIG L  L  
Sbjct: 504 PNTIGNLRRLRILDLEEN--RIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTH 561

Query: 180 LSLEGNPLVSPPMDV 194
           LS+  N L   P ++
Sbjct: 562 LSVSENNLQFLPEEI 576



 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 28/146 (19%)

Query: 51  KTIENCR--SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRV 108
           K ++ CR   ++ L+ + + +  +P T+  E ++L  L +  NKI  LP  +  L SLR 
Sbjct: 155 KALQRCRDEGIKRLDLSKSSITVIPSTVK-ECVHLTELYLYSNKIGQLPPEIGCLVSLRN 213

Query: 109 LDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           L    N L SLPE L+N   L+VL                         D+ +NK+  +P
Sbjct: 214 LALNENSLTSLPESLQNCSQLKVL-------------------------DLRHNKLAEIP 248

Query: 169 DSIGCLRKLQKLSLEGNPLVSPPMDV 194
             I  LR L  L L  N + +   D+
Sbjct: 249 SVIYRLRSLTTLYLRFNRITAVADDL 274


>gi|60360214|dbj|BAD90351.1| mKIAA4018 protein [Mus musculus]
          Length = 606

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/214 (36%), Positives = 116/214 (54%), Gaps = 23/214 (10%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 202 LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 260

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 261 LDLGNNEIYNLPESIG-ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPE 319

Query: 122 DLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELDVS 160
           ++  L +L  L ISQN                        L  LP +IG   +L EL ++
Sbjct: 320 EISGLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLT 379

Query: 161 YNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N++ TLP SIG L+KL  L+ + N LVS P ++
Sbjct: 380 ENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI 413



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 107/195 (54%), Gaps = 7/195 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   AR L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L
Sbjct: 109 VPEEIYRYARSLEELLLD--ANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQL 166

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP+S   L +L  L      L+SL
Sbjct: 167 VELDVSRNDIPEIPESIAF-CKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 225

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++ NL NL  L + +N   L  LP S+  L  L ELD+  N+I  LP+SIG L  L+ 
Sbjct: 226 PENIGNLYNLASLELRENL--LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKD 283

Query: 180 LSLEGNPLVSPPMDV 194
           L L+GN L   P ++
Sbjct: 284 LWLDGNQLSELPQEI 298



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 99/187 (52%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L+V D SGN L  LP++    ++L  L+ N  
Sbjct: 161 ANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDI 220

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD   N + +LPE +  L+
Sbjct: 221 SLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALL 279

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L +  N   L  LP  IG L +L+ LDVS N++  LP+ I  L  L  L +  N L
Sbjct: 280 HLKDLWLDGN--QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLL 337

Query: 188 VSPPMDV 194
            + P  +
Sbjct: 338 ETIPEGI 344



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 104/188 (55%), Gaps = 7/188 (3%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N++ LDV  N+L+ LP  I  L+ L  L +S NLLE++P+ I   + L  L  + N+L
Sbjct: 301 LKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRL 360

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            QLP+ IG +  NL  L +  N+++ LP+S+  L  L  L+A  N L SLP+++    +L
Sbjct: 361 TQLPEAIG-DCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSL 419

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN---P 186
            +  I  N   L  LP  +   + L  LDV+ N++  LP S+  L KL+ L L  N   P
Sbjct: 420 TMFCIRDN--RLTRLPAEVSQAVELHVLDVAGNRLHHLPLSLTTL-KLKALWLSDNQSQP 476

Query: 187 LVSPPMDV 194
           L++   D+
Sbjct: 477 LLTFQTDI 484



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 84/182 (46%), Gaps = 28/182 (15%)

Query: 14  VVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQL 72
             L V +    C+P    C   ++ +D     L  +P+ I    RSLEEL  + N+LR+L
Sbjct: 75  TALVVEAAMFHCIP-LWRCNRHVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLREL 133

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P+   F+L+ L+ L ++ N+I                       + LP ++ N + L  L
Sbjct: 134 PEQF-FQLVKLRKLGLSDNEI-----------------------QRLPPEIANFMQLVEL 169

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
           ++S+N   +  +P SI    +L   D S N +T LP+S   L+ L  LS+    L S P 
Sbjct: 170 DVSRN--DIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPE 227

Query: 193 DV 194
           ++
Sbjct: 228 NI 229


>gi|148669768|gb|EDL01715.1| soc-2 (suppressor of clear) homolog (C. elegans), isoform CRA_a
           [Mus musculus]
          Length = 524

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 105/187 (56%), Gaps = 3/187 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L  +  L ++SN+L+ LP  +GCL  L  L +S N L SLP +++N + L  L+   NKL
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 181

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           R++P  + + L +L TL +  N+I  + + + +L  L +L  R N +K LP ++  L NL
Sbjct: 182 REIPSVV-YRLDSLTTLYLRFNRITTVEKDIKNLPKLSMLSIRENKIKQLPAEIGELCNL 240

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
             L+++ N   LE LP  IG    +  LD+ +N +  LPD+IG L  L +L L  N L +
Sbjct: 241 ITLDVAHN--QLEHLPKEIGNCTQITNLDLQHNDLLDLPDTIGNLSSLNRLGLRYNRLSA 298

Query: 190 PPMDVVE 196
            P  + +
Sbjct: 299 IPRSLAK 305



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 101/185 (54%), Gaps = 12/185 (6%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  +  L+   N L  LPD
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPD 278

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEVLN 133
           TIG  L +L  L +  N++  +P+SL   ++L  L+   N + +LPE  L +L+ L  L 
Sbjct: 279 TIG-NLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLT 337

Query: 134 ISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNPLV 188
           +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N L 
Sbjct: 338 LARNCFQL-----YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLT 392

Query: 189 SPPMD 193
           S P+D
Sbjct: 393 SLPLD 397



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 108/230 (46%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N L  LP++IG LS L  L +  N L ++P+++  C +LEELN   N +  L
Sbjct: 263 ITNLDLQHNDLLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTL 322

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+++   L+ L +L++  NC                                        
Sbjct: 323 PESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLS 382

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N L  +PED+  L++LEVL +S N   L+ L
Sbjct: 383 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKL 440

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ +G L  L ELD+  NK+ +LP+ I  L+ LQKL L  N L + P  +
Sbjct: 441 PHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLSTLPRGI 490



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 89/163 (54%), Gaps = 8/163 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 357 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  L +L  LR LD   N L+SLP ++  L +L
Sbjct: 415 TKIPEDVSG-LVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
           + L ++ N   L TLP  IG L +L  L +  N +T LP+ IG
Sbjct: 474 QKLVLTNN--QLSTLPRGIGHLTNLTHLGLGENLLTHLPEEIG 514



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 99/197 (50%), Gaps = 9/197 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKV---LDVSGNLLESLPKTI-ENCR 57
           +PESL + L+ +  L +  N  +  P  +G  S+      L++  N +  +P  I    +
Sbjct: 322 LPESLLSSLVKLNSLTLARNCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAK 379

Query: 58  SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK 117
            L +LN   N+L  LP   G    ++  L++  N++  +P+ ++ L SL VL    N LK
Sbjct: 380 VLSKLNMKDNQLTSLPLDFGT-WTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 438

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
            LP  L NL  L  L++ +N   LE+LP  I  L  L +L ++ N+++TLP  IG L  L
Sbjct: 439 KLPHGLGNLRKLRELDLEEN--KLESLPNEIAYLKDLQKLVLTNNQLSTLPRGIGHLTNL 496

Query: 178 QKLSLEGNPLVSPPMDV 194
             L L  N L   P ++
Sbjct: 497 THLGLGENLLTHLPEEI 513



 Score = 45.1 bits (105), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L ++   I ILP S+  LT L  L    N L+SLP ++  L+NL  L +S+N   L +LP
Sbjct: 105 LDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLP 162

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            S+  L  L  LD+ +NK+  +P  +  L  L  L L  N + +   D+
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 211



 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 36/65 (55%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  N+L+ LPN I  L  L+ L ++ N L +LP+ I +  +L  L    N L  LP+ 
Sbjct: 453 LDLEENKLESLPNEIAYLKDLQKLVLTNNQLSTLPRGIGHLTNLTHLGLGENLLTHLPEE 512

Query: 76  IGFEL 80
           IG  L
Sbjct: 513 IGRNL 517


>gi|260788666|ref|XP_002589370.1| hypothetical protein BRAFLDRAFT_217855 [Branchiostoma floridae]
 gi|229274547|gb|EEN45381.1| hypothetical protein BRAFLDRAFT_217855 [Branchiostoma floridae]
          Length = 258

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 117/226 (51%), Gaps = 20/226 (8%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE +   + ++ VLDV  N+L  +P +IG L KL  L    N+L SLP+ I + + L  
Sbjct: 27  IPEEV-FDITDLEVLDVSRNKLTSIPEAIGRLQKLYRLSAYSNMLTSLPQAIGSLQKLTH 85

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+L ++P  +   L NL+ LS+  NK+   P  +  L  LR L    N L  +P 
Sbjct: 86  LYICDNQLTEVPSGV-CSLPNLEVLSVYNNKLSTFPPGVEKLQKLRELHIDYNQLTEVPS 144

Query: 122 DLENLINLEVLNISQN----FQ---------YLE-----TLPYSIGLLMSLVELDVSYNK 163
            + +L NLEVL++S N    F+         YLE     T P  +  L ++ +L +  N 
Sbjct: 145 GVCSLPNLEVLDVSNNKLSAFRLHLHNLQEVYLENNKFHTFPEVLCELPAMEKLVIKNNN 204

Query: 164 ITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEK 209
           IT LP ++    KL+ L + GNPL  PP DV EQG  A+  +L ++
Sbjct: 205 ITRLPTALHRADKLEDLDVSGNPLTYPPQDVCEQGTGAIMAFLKQE 250


>gi|421090532|ref|ZP_15551324.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410000746|gb|EKO51374.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 288

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/232 (37%), Positives = 127/232 (54%), Gaps = 11/232 (4%)

Query: 17  DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTI 76
           D   N LK LP  IG L  LK L ++ N + +LP  I N ++L+ L+ N N+L  +P  I
Sbjct: 56  DNEDNPLKTLPKEIGNLKNLKELSLNTNEITTLPSEIGNLKNLQVLSLNVNRLETIPKEI 115

Query: 77  GFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQ 136
           G  L NLK LSI  NK+  LP+ + +L +L+ L    N LK LP+++ NL  L+ +++S 
Sbjct: 116 G-NLKNLKELSIGLNKLKTLPKEIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQRMHLST 174

Query: 137 NFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           N   L  LP  I  L  L+E+ +  N+ TTLP  IG L+ L+ L L  N L+S P ++  
Sbjct: 175 N--ELTKLPQEIKNLEGLIEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLPSEI-- 230

Query: 197 QGLSAVKG-YLSEKMNNDHKSPKKKSWVGKLVKYGTFNGALRNHRSEERERF 247
             L  +K  YL E  N   K PK+ + + KL +  +  G      SEE+ER 
Sbjct: 231 GNLKNLKELYLEE--NQLTKLPKQIAALKKLSRL-SLEG--NQFPSEEKERI 277



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 110/188 (58%), Gaps = 3/188 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L +++N++  LP+ IG L  L+VL ++ N LE++PK I N ++L+EL+   N
Sbjct: 70  GNLKNLKELSLNTNEITTLPSEIGNLKNLQVLSLNVNRLETIPKEIGNLKNLKELSIGLN 129

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL+ LP  IG  L NLK L ++ N++ +LPQ + +L  L+ +    N L  LP++++NL 
Sbjct: 130 KLKTLPKEIG-NLKNLKELYLSRNQLKVLPQEIWNLKKLQRMHLSTNELTKLPQEIKNLE 188

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L  + +  N     TLP  IG L +L  L +  N++ +LP  IG L+ L++L LE N L
Sbjct: 189 GLIEIYLYDN--QFTTLPKEIGNLKNLRNLVLGRNQLISLPSEIGNLKNLKELYLEENQL 246

Query: 188 VSPPMDVV 195
              P  + 
Sbjct: 247 TKLPKQIA 254


>gi|255071329|ref|XP_002507746.1| predicted protein [Micromonas sp. RCC299]
 gi|226523021|gb|ACO69004.1| predicted protein [Micromonas sp. RCC299]
          Length = 348

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 109/187 (58%), Gaps = 2/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL  +  L++ SN+L+ LP  IG L+ L+ L++S N L S+P  I    SL +L+   N
Sbjct: 83  GRLNALSTLNLTSNKLRSLPAEIGQLTSLRRLELSSNQLTSVPAEIGLLTSLRQLHLICN 142

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  IG +L +LK LS+   ++  LP  +  LTSL VL+ + N L S+P ++  L 
Sbjct: 143 QLTSVPAEIG-QLTSLKELSLAGTELRSLPAEIWQLTSLEVLELQNNHLTSVPAEIGQLT 201

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  L++  N++ L ++P  IG L SL  LD+S N++T+ P  IG L  L +L L  N  
Sbjct: 202 SLRELHLGGNWR-LTSVPAEIGQLTSLQVLDLSRNQLTSAPAEIGQLASLTELFLHDNQF 260

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 261 TSVPAEI 267



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/173 (37%), Positives = 96/173 (55%), Gaps = 4/173 (2%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELIN 82
           +  LP  IG L+ L  L+++ N L SLP  I    SL  L  + N+L  +P  IG  L +
Sbjct: 75  IGALPAEIGRLNALSTLNLTSNKLRSLPAEIGQLTSLRRLELSSNQLTSVPAEIGL-LTS 133

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           L+ L + CN++  +P  +  LTSL+ L      L+SLP ++  L +LEVL +  N  +L 
Sbjct: 134 LRQLHLICNQLTSVPAEIGQLTSLKELSLAGTELRSLPAEIWQLTSLEVLELQNN--HLT 191

Query: 143 TLPYSIGLLMSLVELDVSYN-KITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           ++P  IG L SL EL +  N ++T++P  IG L  LQ L L  N L S P ++
Sbjct: 192 SVPAEIGQLTSLRELHLGGNWRLTSVPAEIGQLTSLQVLDLSRNQLTSAPAEI 244



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++ VLD+  NQL   P  IG L+ L  L +  N   S+P  I    SL EL    N
Sbjct: 222 GQLTSLQVLDLSRNQLTSAPAEIGQLASLTELFLHDNQFTSVPAEIGQLTSLRELRLGGN 281

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  +P  IG +L +LK L +  N++  +P  +  LTSL+ L  R N L S+P
Sbjct: 282 QLTSVPSEIG-QLTSLKELWLFDNRLTSVPAEMGQLTSLKKLYLRDNLLTSVP 333



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 1/117 (0%)

Query: 22  QLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELI 81
           +L  +P  IG L+ L+VLD+S N L S P  I    SL EL  + N+   +P  IG +L 
Sbjct: 213 RLTSVPAEIGQLTSLQVLDLSRNQLTSAPAEIGQLASLTELFLHDNQFTSVPAEIG-QLT 271

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNF 138
           +L+ L +  N++  +P  +  LTSL+ L    N L S+P ++  L +L+ L +  N 
Sbjct: 272 SLRELRLGGNQLTSVPSEIGQLTSLKELWLFDNRLTSVPAEMGQLTSLKKLYLRDNL 328



 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 34/59 (57%)

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           + F  +  LP  IG L +L  L+++ NK+ +LP  IG L  L++L L  N L S P ++
Sbjct: 70  EGFGLIGALPAEIGRLNALSTLNLTSNKLRSLPAEIGQLTSLRRLELSSNQLTSVPAEI 128


>gi|418667007|ref|ZP_13228423.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Pyrogenes str. 2006006960]
 gi|410757251|gb|EKR18865.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Pyrogenes str. 2006006960]
          Length = 564

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 106/189 (56%), Gaps = 17/189 (8%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  NQL  LP  IG L  L+ L +S N L + PK I    +L+EL+ N N
Sbjct: 9   GQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGN 68

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG +L  L+ L+++ N+I  LP+               N L +LP ++  L 
Sbjct: 69  QLKTLPKEIG-QLQKLEKLNLDGNQITTLPKG--------------NQLTTLPAEIGQLK 113

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L++S  +  L TLP  IG L +L  LD+  N++TTLP  I  L+ L++L L GN L
Sbjct: 114 NLQILSLS--YNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKL 171

Query: 188 VSPPMDVVE 196
              P ++ E
Sbjct: 172 TIVPKEIWE 180



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 74/189 (39%), Positives = 108/189 (57%), Gaps = 10/189 (5%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTI---ENCRSLEELNAN 65
           +L N+  L ++   L  LP  I  L  L+ L +  N L+SLPK I    N RSL+ + AN
Sbjct: 369 KLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLD-IGAN 427

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
            N+   LP  I   L NL++L +N N+  I P+ +  L  L +L+   N L +LPE +  
Sbjct: 428 -NEFEVLPKEIA-RLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 485

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L  L++L++S N   L TLP  IG L +L EL + YN+I TLP+ I  L+ L+KL+L  N
Sbjct: 486 LKGLQMLDLSHN--RLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYEN 543

Query: 186 PLVSPPMDV 194
           P+  PP ++
Sbjct: 544 PI--PPQEL 550



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 102/184 (55%), Gaps = 3/184 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L +  N+L  LP  IG L  LK LD+ GN L +LP+ I   ++L+EL  N N
Sbjct: 110 GQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGN 169

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  +P  I +EL NL  L +  N+I  LP+ +    +L+ L+ R N L +LP ++    
Sbjct: 170 KLTIVPKEI-WELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIG--E 226

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
              +  ++     ++ LP  IG L +L   ++S NK+ ++P  IG L+ L+ L LE N L
Sbjct: 227 LKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQL 286

Query: 188 VSPP 191
            + P
Sbjct: 287 KTLP 290



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 1/102 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ARL N+  L ++ N+ K  P  I  L KL +L+V+ N L++LP+ I   + L+ L+ + N
Sbjct: 438 ARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHN 497

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           +L  LP  IG +L NL  L +  N+I  LP+ +  L +LR L
Sbjct: 498 RLTTLPSEIG-QLHNLTELYLQYNRIKTLPEEIARLQNLRKL 538



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 3/94 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +V+L+V++NQL  LP  IG L  L++LD+S N L +LP  I    +L EL   +N+++ L
Sbjct: 466 LVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTL 525

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSL 106
           P+ I   L NL+ L++  N I   PQ L  +  L
Sbjct: 526 PEEIA-RLQNLRKLTLYENPIP--PQELDKIRKL 556



 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 31/54 (57%)

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L  LP  IG L +L  L++  N++ TLP  IG L+ LQ L L  N L + P ++
Sbjct: 1   LTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEI 54


>gi|194743364|ref|XP_001954170.1| GF16883 [Drosophila ananassae]
 gi|261277884|sp|B3LWU3.1|SUR8_DROAN RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|190627207|gb|EDV42731.1| GF16883 [Drosophila ananassae]
          Length = 641

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/181 (36%), Positives = 107/181 (59%), Gaps = 3/181 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           + +  L ++SN++  LP  IGCL  L+ L ++ N L SLP++++NC  L+ L+   NKL 
Sbjct: 183 VQITELYLYSNKIGQLPPEIGCLVNLRNLALNENSLTSLPESLQNCNQLKVLDLRHNKLA 242

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
           ++P  I + L +L TL +  N+I  +   L  L +L +L  R N ++ L   +  L+NL 
Sbjct: 243 EIPPVI-YRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLT 301

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++S N  +LE LP  IG  ++L  LD+ +N++  +PDSIG L+ L +L +  N L S 
Sbjct: 302 TLDVSHN--HLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLTSV 359

Query: 191 P 191
           P
Sbjct: 360 P 360



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/182 (36%), Positives = 104/182 (57%), Gaps = 3/182 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L+N+  L ++ N L  LP S+   ++LKVLD+  N L  +P  I   RSL  L   FN++
Sbjct: 205 LVNLRNLALNENSLTSLPESLQNCNQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRI 264

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             + D +  +L+NL  LS+  NKI  L  ++  L +L  LD   N L+ LPED+ N +NL
Sbjct: 265 TAVADDL-RQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNL 323

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
             L++  N   L  +P SIG L SLV L + YN++T++P ++   + + + ++EGN +  
Sbjct: 324 SALDLQHN--ELLDIPDSIGNLKSLVRLGMRYNRLTSVPATLKNCKCMDEFNVEGNGITQ 381

Query: 190 PP 191
            P
Sbjct: 382 LP 383



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 116/245 (47%), Gaps = 51/245 (20%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +    +N+  LD+  N+L  +P+SIG L  L  L +  N L S+P T++NC+ ++E
Sbjct: 313 LPEDI-GNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLTSVPATLKNCKCMDE 371

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ------------SLTH------- 102
            N   N + QLPD +   L  L T++++ N+    P             +L H       
Sbjct: 372 FNVEGNGITQLPDGMLASLSGLTTITLSRNQFTSYPTGGPAQFTNVYSINLEHNRIDKIP 431

Query: 103 -------------------LTSLRV----------LDARLNCLKSLPEDLENLINLEVLN 133
                              LT+L +          L+   N L+ LP+D+ NL NLE+L 
Sbjct: 432 YGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILI 491

Query: 134 ISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMD 193
           +S N   L+ +P +IG L  L  LD+  N+I TLP  IG L +LQ+L L+ N +   P  
Sbjct: 492 LSNNM--LKKIPNTIGNLRRLRILDLEENRIETLPHEIGLLHELQRLILQTNQITMLPRS 549

Query: 194 VVEQG 198
           +   G
Sbjct: 550 IGHLG 554



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 97/161 (60%), Gaps = 2/161 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           +N+V L++ +N L+ LP+ I  L  L++L +S N+L+ +P TI N R L  L+   N++ 
Sbjct: 462 VNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIE 521

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG  L  L+ L +  N+I +LP+S+ HL +L  L    N L+ LPE++ +L +LE
Sbjct: 522 TLPHEIGL-LHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLE 580

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
            L I+QN   LE LP+ + L  +L  L++    ++T+P  I
Sbjct: 581 NLYINQN-PGLEKLPFELALCQNLKYLNIDKCPLSTIPPEI 620



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 26/179 (14%)

Query: 36  LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           +K LD+S + +  +P T+++C  + EL    NK+ QLP  IG  L+NL+ L++N N +  
Sbjct: 162 IKRLDLSKSSITVIPSTVKDCVQITELYLYSNKIGQLPPEIGC-LVNLRNLALNENSLTS 220

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLP-----------------------EDLENLINLEVL 132
           LP+SL +   L+VLD R N L  +P                       +DL  L+NL +L
Sbjct: 221 LPESLQNCNQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTML 280

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           ++ +N   +  L  +IG L++L  LDVS+N +  LP+ IG    L  L L+ N L+  P
Sbjct: 281 SLREN--KIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIP 337



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 100/185 (54%), Gaps = 4/185 (2%)

Query: 3   PESLTARLLNVVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEE 61
           P    A+  NV  +++  N++  +P  I   +K L  L++  N+L +LP  I    ++ E
Sbjct: 407 PTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVE 466

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N L++LPD I   L NL+ L ++ N +  +P ++ +L  LR+LD   N +++LP 
Sbjct: 467 LNLATNALQKLPDDI-MNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIETLPH 525

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L  L+ L +  N   +  LP SIG L +L  L VS N +  LP+ IG L  L+ L 
Sbjct: 526 EIGLLHELQRLILQTN--QITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLY 583

Query: 182 LEGNP 186
           +  NP
Sbjct: 584 INQNP 588



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 98/195 (50%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +P+ + A L  +  + +  NQ    P       + +  +++  N ++ +P  I    + L
Sbjct: 382 LPDGMLASLSGLTTITLSRNQFTSYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGL 441

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N L  LP  IG   +N+  L++  N +  LP  + +L +L +L    N LK +
Sbjct: 442 TKLNMKENMLTALPLDIG-TWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKI 500

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  + NL  L +L++ +N   +ETLP+ IGLL  L  L +  N+IT LP SIG L  L  
Sbjct: 501 PNTIGNLRRLRILDLEEN--RIETLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTH 558

Query: 180 LSLEGNPLVSPPMDV 194
           LS+  N L   P ++
Sbjct: 559 LSVSENNLQFLPEEI 573



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 102/188 (54%), Gaps = 4/188 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L+N+ +L +  N+++ L ++IG L  L  LDVS N LE LP+ I NC +L  L+   N+
Sbjct: 273 QLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNE 332

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLI 127
           L  +PD+IG  L +L  L +  N++  +P +L +   +   +   N +  LP+  L +L 
Sbjct: 333 LLDIPDSIG-NLKSLVRLGMRYNRLTSVPATLKNCKCMDEFNVEGNGITQLPDGMLASLS 391

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNP 186
            L  + +S+N Q+            ++  +++ +N+I  +P  I    K L KL+++ N 
Sbjct: 392 GLTTITLSRN-QFTSYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENM 450

Query: 187 LVSPPMDV 194
           L + P+D+
Sbjct: 451 LTALPLDI 458



 Score = 44.3 bits (103), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 64/111 (57%), Gaps = 2/111 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +LD+  N+++ LP+ IG L +L+ L +  N +  LP++I +  +L  L+ + N L+ LP+
Sbjct: 512 ILDLEENRIETLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPE 571

Query: 75  TIGFELINLKTLSINCN-KIVILPQSLTHLTSLRVLDARLNCLKSLPEDLE 124
            IG  L +L+ L IN N  +  LP  L    +L+ L+     L ++P +++
Sbjct: 572 EIG-SLESLENLYINQNPGLEKLPFELALCQNLKYLNIDKCPLSTIPPEIQ 621


>gi|330845182|ref|XP_003294476.1| hypothetical protein DICPUDRAFT_159478 [Dictyostelium purpureum]
 gi|325075057|gb|EGC28999.1| hypothetical protein DICPUDRAFT_159478 [Dictyostelium purpureum]
          Length = 3023

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 121/211 (57%), Gaps = 7/211 (3%)

Query: 11   LNVVVLDVHSNQLKCLPNSIGC-LSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
            L++  LD+ +NQ+    N I   L+ LK+L ++   +  LPK I + RSLE L  +FN L
Sbjct: 1373 LDLSELDLSTNQVD---NGIPTKLTNLKILLLNQTHITELPKEIGDLRSLERLELDFNTL 1429

Query: 70   RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
              LP +    L+ L+ LS+  N  V +P+ +  L +L+ L    N L+ LP ++  L  L
Sbjct: 1430 TNLPHSFR-NLLKLEDLSLGFNTFVEVPREICFLVNLKRLIFEGNQLQFLPNEISQLTKL 1488

Query: 130  EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
            ++LN+ QN   L+TLP SIG L++L  L++  N++  L  ++G L  L +L L+GN L +
Sbjct: 1489 QILNLRQN--KLDTLPASIGQLINLTSLNLHNNQLVALRPTMGLLVNLNELKLDGNRLKT 1546

Query: 190  PPMDVVEQGLSAVKGYLSEKMNNDHKSPKKK 220
            PP ++V QGL ++  YL + +    +  K K
Sbjct: 1547 PPPEIVIQGLKSILLYLKDLIKGQEQCYKMK 1577



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 101/201 (50%), Gaps = 15/201 (7%)

Query: 4    ESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLP-KTIE----NCRS 58
            +S    L  +  L++  N L  +  S+  L  L+ L +  N + + P +TI+       S
Sbjct: 1264 DSTLYHLTGLKQLNLSKNNLNSITCSLSSLVNLERLSLEENHITNFPIETIQLLSQKLFS 1323

Query: 59   LEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKS 118
            L+ELN + N+L  LP+        L+ LS+  N+   +P+ + HL +L  LD  L+ L  
Sbjct: 1324 LKELNLSSNQLIDLPNEFSL-FKKLQKLSLKNNRFSTIPEVINHLENLEELD--LSELDL 1380

Query: 119  LPEDLEN-----LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGC 173
                ++N     L NL++L ++Q   ++  LP  IG L SL  L++ +N +T LP S   
Sbjct: 1381 STNQVDNGIPTKLTNLKILLLNQT--HITELPKEIGDLRSLERLELDFNTLTNLPHSFRN 1438

Query: 174  LRKLQKLSLEGNPLVSPPMDV 194
            L KL+ LSL  N  V  P ++
Sbjct: 1439 LLKLEDLSLGFNTFVEVPREI 1459



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 7/119 (5%)

Query: 80   LINLKTLSINCNKIVILPQS----LTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
            L  L++L ++  ++  LP +    L HLT L+ L+   N L S+   L +L+NLE L++ 
Sbjct: 1243 LPGLESLDLSGLRLYYLPSTYDSTLYHLTGLKQLNLSKNNLNSITCSLSSLVNLERLSLE 1302

Query: 136  QNFQY---LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            +N      +ET+      L SL EL++S N++  LP+     +KLQKLSL+ N   + P
Sbjct: 1303 ENHITNFPIETIQLLSQKLFSLKELNLSSNQLIDLPNEFSLFKKLQKLSLKNNRFSTIP 1361



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 70/127 (55%), Gaps = 5/127 (3%)

Query: 10   LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
            L+N+  L    NQL+ LPN I  L+KL++L++  N L++LP +I    +L  LN + N+L
Sbjct: 1462 LVNLKRLIFEGNQLQFLPNEISQLTKLQILNLRQNKLDTLPASIGQLINLTSLNLHNNQL 1521

Query: 70   RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
              L  T+G  L+NL  L ++ N++   P  +     ++ L + L  LK L +  E    +
Sbjct: 1522 VALRPTMGL-LVNLNELKLDGNRLKTPPPEIV----IQGLKSILLYLKDLIKGQEQCYKM 1576

Query: 130  EVLNISQ 136
            +++ + Q
Sbjct: 1577 KLMIVGQ 1583


>gi|418743909|ref|ZP_13300268.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410795304|gb|EKR93201.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 360

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/202 (39%), Positives = 112/202 (55%), Gaps = 14/202 (6%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCL---------PNSIGCLSKLKVLDVSGNLLESLPKT 52
           +PE++  RL N+ VLD+  N L+ L            IG L  LK L+++GN L  LPK 
Sbjct: 129 LPENI-GRLQNLEVLDLSVN-LRSLIFRSEEIGISEEIGDLQNLKELNLTGNRLTMLPKE 186

Query: 53  IENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDAR 112
           I   +SLE+L+ + N L  LP  IG  L NLK LS+  N++   P+ +  L +L  LD  
Sbjct: 187 IGKLQSLEKLDLSENSLAILPKEIG-RLQNLKRLSLKGNRLTTFPKEIGKLQNLEELDLS 245

Query: 113 LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
            N L  LP+++    NL  L++  N   L TLP  IG L +L EL +  N++TTLP  IG
Sbjct: 246 ENLLAILPKEISRFQNLRELSLEGN--RLSTLPKEIGRLKNLKELSLGGNRLTTLPKEIG 303

Query: 173 CLRKLQKLSLEGNPLVSPPMDV 194
             + L +L LEGN L + P ++
Sbjct: 304 KFQNLIELRLEGNRLTTLPKEI 325



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 104/178 (58%), Gaps = 3/178 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+  L++  N+L  LP  IG L  L+ LD+S N L  LPK I   ++L+ L+   N+L
Sbjct: 167 LQNLKELNLTGNRLTMLPKEIGKLQSLEKLDLSENSLAILPKEIGRLQNLKRLSLKGNRL 226

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
              P  IG +L NL+ L ++ N + ILP+ ++   +LR L    N L +LP+++  L NL
Sbjct: 227 TTFPKEIG-KLQNLEELDLSENLLAILPKEISRFQNLRELSLEGNRLSTLPKEIGRLKNL 285

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           + L++  N   L TLP  IG   +L+EL +  N++TTLP  IG L+ L  L+L  NPL
Sbjct: 286 KELSLGGN--RLTTLPKEIGKFQNLIELRLEGNRLTTLPKEIGKLQCLWSLNLSKNPL 341



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/192 (38%), Positives = 112/192 (58%), Gaps = 13/192 (6%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V +L + + ++K LP  I  L  L+ LD+  N L +LPK I    +L+ L    N L  
Sbjct: 46  DVHILYLSNQEIKSLPRQIANLKNLRKLDLRYNQLTTLPKEIGQLHNLQSLCLLGNSLST 105

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL---------PED 122
           LP+ IG  L NLK LS++ N ++ LP+++  L +L VLD  +N L+SL          E+
Sbjct: 106 LPEEIG-HLKNLKELSLSHNLLITLPENIGRLQNLEVLDLSVN-LRSLIFRSEEIGISEE 163

Query: 123 LENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           + +L NL+ LN++ N   L  LP  IG L SL +LD+S N +  LP  IG L+ L++LSL
Sbjct: 164 IGDLQNLKELNLTGN--RLTMLPKEIGKLQSLEKLDLSENSLAILPKEIGRLQNLKRLSL 221

Query: 183 EGNPLVSPPMDV 194
           +GN L + P ++
Sbjct: 222 KGNRLTTFPKEI 233



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 112/217 (51%), Gaps = 32/217 (14%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A L N+  LD+  NQL  LP  IG L  L+ L + GN L +LP+ I + ++L+EL+ + N
Sbjct: 65  ANLKNLRKLDLRYNQLTTLPKEIGQLHNLQSLCLLGNSLSTLPEEIGHLKNLKELSLSHN 124

Query: 68  KLRQLPDTIG------------------------------FELINLKTLSINCNKIVILP 97
            L  LP+ IG                               +L NLK L++  N++ +LP
Sbjct: 125 LLITLPENIGRLQNLEVLDLSVNLRSLIFRSEEIGISEEIGDLQNLKELNLTGNRLTMLP 184

Query: 98  QSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVEL 157
           + +  L SL  LD   N L  LP+++  L NL+ L++  N   L T P  IG L +L EL
Sbjct: 185 KEIGKLQSLEKLDLSENSLAILPKEIGRLQNLKRLSLKGN--RLTTFPKEIGKLQNLEEL 242

Query: 158 DVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           D+S N +  LP  I   + L++LSLEGN L + P ++
Sbjct: 243 DLSENLLAILPKEISRFQNLRELSLEGNRLSTLPKEI 279



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/130 (39%), Positives = 72/130 (55%), Gaps = 1/130 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  L +  N+L   P  IG L  L+ LD+S NLL  LPK I   ++L EL+   N
Sbjct: 211 GRLQNLKRLSLKGNRLTTFPKEIGKLQNLEELDLSENLLAILPKEISRFQNLRELSLEGN 270

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG  L NLK LS+  N++  LP+ +    +L  L    N L +LP+++  L 
Sbjct: 271 RLSTLPKEIG-RLKNLKELSLGGNRLTTLPKEIGKFQNLIELRLEGNRLTTLPKEIGKLQ 329

Query: 128 NLEVLNISQN 137
            L  LN+S+N
Sbjct: 330 CLWSLNLSKN 339


>gi|395833350|ref|XP_003789701.1| PREDICTED: leucine-rich repeat-containing protein 1 [Otolemur
           garnettii]
          Length = 524

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/193 (39%), Positives = 110/193 (56%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 120 LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L +LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 179 LDLGNNEIYNLPESIG-ALFHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPE 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L  L ISQN   LE +P  IG L  L  L V  N++T LP++IG    L +L 
Sbjct: 238 EISGLTSLTDLVISQNL--LEMIPDGIGKLKKLSILKVDQNRLTQLPEAIGDCDSLTELV 295

Query: 182 LEGNPLVSPPMDV 194
           L  N LV+ P  +
Sbjct: 296 LTENRLVTLPKSI 308



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 103/187 (55%), Gaps = 5/187 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           AR L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L EL+ + N
Sbjct: 35  ARSLEELLLD--ANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRN 92

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            + ++P++I F    L+    + N +  LP+S   L +L  L      L+SLPE++ NL 
Sbjct: 93  DIPEIPESISF-CKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLY 151

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L + +N   L  LP S+  L  L ELD+  N+I  LP+SIG L  L+ L L+GN L
Sbjct: 152 NLASLELRENL--LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALFHLKDLWLDGNQL 209

Query: 188 VSPPMDV 194
              P ++
Sbjct: 210 SELPQEI 216



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 84/250 (33%), Positives = 118/250 (47%), Gaps = 32/250 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP++    ++L  L+ N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDI 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD----------------- 110
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD                 
Sbjct: 139 SLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALF 197

Query: 111 ------ARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L  LP+++ NL NL  L++S+N   LE LP  I  L SL +L +S N +
Sbjct: 198 HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN--RLERLPEEISGLTSLTDLVISQNLL 255

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVG 224
             +PD IG L+KL  L ++ N L   P + +    S  +  L+E  N     PK    +G
Sbjct: 256 EMIPDGIGKLKKLSILKVDQNRLTQLP-EAIGDCDSLTELVLTE--NRLVTLPKS---IG 309

Query: 225 KLVKYGTFNG 234
           KL K   FN 
Sbjct: 310 KLKKLSNFNA 319



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 105/195 (53%), Gaps = 4/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+SLT +L  +  LD+ +N++  LP SIG L  LK L + GN L  LP+ I N ++L  
Sbjct: 166 LPDSLT-QLRRLEELDLGNNEIYNLPESIGALFHLKDLWLDGNQLSELPQEIGNLKNLLC 224

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L +LP+ I   L +L  L I+ N + ++P  +  L  L +L    N L  LPE
Sbjct: 225 LDVSENRLERLPEEISG-LTSLTDLVISQNLLEMIPDGIGKLKKLSILKVDQNRLTQLPE 283

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + +  +L  L +++N   L TLP SIG L  L   +   NK+T+LP  IG    L    
Sbjct: 284 AIGDCDSLTELVLTEN--RLVTLPKSIGKLKKLSNFNADRNKLTSLPKEIGGCSSLTVFC 341

Query: 182 LEGNPLVSPPMDVVE 196
           +  N L   P ++ +
Sbjct: 342 VRDNRLTRIPAEMSQ 356



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 94/176 (53%), Gaps = 4/176 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N++ LDV  N+L+ LP  I  L+ L  L +S NLLE +P  I   + L  L  + N+L
Sbjct: 219 LKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMIPDGIGKLKKLSILKVDQNRL 278

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            QLP+ IG +  +L  L +  N++V LP+S+  L  L   +A  N L SLP+++    +L
Sbjct: 279 TQLPEAIG-DCDSLTELVLTENRLVTLPKSIGKLKKLSNFNADRNKLTSLPKEIGGCSSL 337

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            V  +  N   L  +P  +     L  LDV+ N++  LP S+  L KL+ L L  N
Sbjct: 338 TVFCVRDN--RLTRIPAEMSQATELHVLDVAGNRLLHLPFSLTAL-KLKALWLSDN 390



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 2/138 (1%)

Query: 57  RSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
           R +E ++     L  +PD I     +L+ L ++ N++  LP+    L  LR L    N +
Sbjct: 12  RHVETIDRRHCSLVYVPDEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + LP ++ N + L  L++S+N   +  +P SI    +L   D S N +T LP+S   L+ 
Sbjct: 72  QRLPPEIANFMQLVELDVSRN--DIPEIPESISFCKALQIADFSGNPLTRLPESFPELQN 129

Query: 177 LQKLSLEGNPLVSPPMDV 194
           L  LS+    L S P ++
Sbjct: 130 LTCLSVNDISLQSLPENI 147


>gi|440894992|gb|ELR47302.1| Leucine-rich repeat and IQ domain-containing protein 4, partial
           [Bos grunniens mutus]
          Length = 585

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 112/225 (49%), Gaps = 30/225 (13%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN-- 67
           L N+ VL +  N++  LP+  G LSKLK+L ++GN   S PK I +  SLE+L    +  
Sbjct: 351 LKNLEVLALDDNKICQLPSDFGSLSKLKILGLTGNQFSSFPKEILSLASLEKLYIGQDEG 410

Query: 68  -KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENL 126
            KL  LP+ I   L NLK L I  N +  LP SL  + +L +LD   N +K LP+     
Sbjct: 411 AKLTHLPECIK-RLQNLKELYIENNHLEYLPVSLGSMPNLEILDCHCNLIKQLPD----- 464

Query: 127 INLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
                               +I    +L EL    N IT LP+++  L  L+ L+L GNP
Sbjct: 465 --------------------AICQAQALKELRFEDNLITYLPENLDSLVNLEVLTLTGNP 504

Query: 187 LVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWV-GKLVKYG 230
           +  PPM V  +G  AV  YL E+ N    + K ++W  G +V+ G
Sbjct: 505 MEEPPMSVCAKGTEAVWEYLRERRNMKELATKIQAWWRGMMVRKG 549



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 102/186 (54%), Gaps = 3/186 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+ ++D+  N+L  +P  IG L+KLK   VS N L  LP+++  C  L  L+ ++N+L
Sbjct: 213 LYNLEIIDLDKNKLTVIPEEIGNLTKLKKFYVSYNSLAVLPESLGRCTRLSVLDVSYNRL 272

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP T+G EL  +  + ++ N +  +P+ L   TSL +L      L+ L      L+NL
Sbjct: 273 HALPHTLG-ELSQMTEVGLSGNHLEKIPRLLCRWTSLFLLYLHNTGLRVLRRSFRRLVNL 331

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           + L++SQNF  LE  P  I  L +L  L +  NKI  LP   G L KL+ L L GN   S
Sbjct: 332 QFLDLSQNF--LEHCPLQICSLKNLEVLALDDNKICQLPSDFGSLSKLKILGLTGNQFSS 389

Query: 190 PPMDVV 195
            P +++
Sbjct: 390 FPKEIL 395



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 105/213 (49%), Gaps = 25/213 (11%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLE--SLPKTIENCRSL 59
           IP+ +   L  + VL ++ N+LK L   +G LS L+ LD+S N LE  SLP  +   R L
Sbjct: 89  IPKDIQ-HLRKIRVLYLNKNKLKNLCPEMGRLSNLEGLDLSDNPLEASSLP-VLSGIRQL 146

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL      L  +P  I   L +L+ L +  N +  LP+ + + T LR +  + N   + 
Sbjct: 147 RELRLYRTDLADIPVVICKLLHHLELLGLAGNHLKSLPKEIVNQTKLREIHLKHNQFAAF 206

Query: 120 PEDLENLINLEVLNISQN---------------------FQYLETLPYSIGLLMSLVELD 158
           P +L +L NLE++++ +N                     +  L  LP S+G    L  LD
Sbjct: 207 PLELCDLYNLEIIDLDKNKLTVIPEEIGNLTKLKKFYVSYNSLAVLPESLGRCTRLSVLD 266

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           VSYN++  LP ++G L ++ ++ L GN L   P
Sbjct: 267 VSYNRLHALPHTLGELSQMTEVGLSGNHLEKIP 299



 Score = 37.4 bits (85), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 3/137 (2%)

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           ++A+   L  +P+ I   L  L+ + +  N I  +P+ + HL  +RVL    N LK+L  
Sbjct: 56  IDASNQSLLTIPEDI-LALRELEEVHLENNLIAEIPKDIQHLRKIRVLYLNKNKLKNLCP 114

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI-GCLRKLQKL 180
           ++  L NLE L++S N     +LP   G +  L EL +    +  +P  I   L  L+ L
Sbjct: 115 EMGRLSNLEGLDLSDNPLEASSLPVLSG-IRQLRELRLYRTDLADIPVVICKLLHHLELL 173

Query: 181 SLEGNPLVSPPMDVVEQ 197
            L GN L S P ++V Q
Sbjct: 174 GLAGNHLKSLPKEIVNQ 190


>gi|418695383|ref|ZP_13256403.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|421108072|ref|ZP_15568616.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
 gi|409956837|gb|EKO15758.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|410006773|gb|EKO60510.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
          Length = 288

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/186 (40%), Positives = 108/186 (58%), Gaps = 6/186 (3%)

Query: 12  NVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +V+VL   D   N LK LP  IG L  LK L +S N + +LP  I N ++L+ L+ N N+
Sbjct: 48  DVLVLRYRDNEENPLKTLPKEIGNLKNLKELSLSTNEITTLPPEIGNLKNLQVLSLNVNR 107

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  +P  IG  L NLK LSI  NK+  LP+ + +L +L+ L    N LK LP+++ NL  
Sbjct: 108 LETIPKEIG-NLKNLKELSIEWNKLKTLPKEIGNLKNLKELYLSRNQLKVLPQEIWNLKK 166

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ +++S N   L  LP  I  L  L+E+ +  N+ TTLP  IG L+ L+ L L  N L+
Sbjct: 167 LQRIHLSTN--ELTKLPQEIKNLEGLIEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLI 224

Query: 189 SPPMDV 194
           S P ++
Sbjct: 225 SLPEEI 230



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 110/188 (58%), Gaps = 3/188 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L + +N++  LP  IG L  L+VL ++ N LE++PK I N ++L+EL+  +N
Sbjct: 70  GNLKNLKELSLSTNEITTLPPEIGNLKNLQVLSLNVNRLETIPKEIGNLKNLKELSIEWN 129

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL+ LP  IG  L NLK L ++ N++ +LPQ + +L  L+ +    N L  LP++++NL 
Sbjct: 130 KLKTLPKEIG-NLKNLKELYLSRNQLKVLPQEIWNLKKLQRIHLSTNELTKLPQEIKNLE 188

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L  + +  N     TLP  IG L +L  L +  N++ +LP+ IG L+ L++L LE N L
Sbjct: 189 GLIEIYLYDN--QFTTLPKEIGNLKNLRNLVLGRNQLISLPEEIGNLKNLKELYLEENQL 246

Query: 188 VSPPMDVV 195
              P  + 
Sbjct: 247 TKLPKQIA 254


>gi|124003637|ref|ZP_01688486.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123991206|gb|EAY30658.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 633

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 98/174 (56%), Gaps = 3/174 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           NQL+ LP S+G L  L  L V GN L  LP  I N   L  LN ++N+L+ LP ++G +L
Sbjct: 428 NQLQVLPKSLGKLKNLHQLSVDGNKLTHLPPGIGNLHRLSLLNLSYNQLQVLPKSLG-KL 486

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            NL  LS++ NK+  LP+ +  L  L +L    N L +LPE +  L  +  LN+  N   
Sbjct: 487 KNLHQLSVDGNKLTELPKIIYDLKKLFLLSLNYNALTALPESIGQLSKVVHLNLEGN--Q 544

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L  LP SIG L  +V L++  N++T LP SIG +R L  L+L+ N L   P  +
Sbjct: 545 LTQLPESIGQLSKVVHLNLEGNQLTQLPKSIGNMRSLYALNLKNNQLTKLPQTI 598



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 111/187 (59%), Gaps = 4/187 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+SL  +L N+  L V  N+L  LP  IG L +L +L++S N L+ LPK++   ++L 
Sbjct: 432 VLPKSL-GKLKNLHQLSVDGNKLTHLPPGIGNLHRLSLLNLSYNQLQVLPKSLGKLKNLH 490

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L+ + NKL +LP  I ++L  L  LS+N N +  LP+S+  L+ +  L+   N L  LP
Sbjct: 491 QLSVDGNKLTELPKII-YDLKKLFLLSLNYNALTALPESIGQLSKVVHLNLEGNQLTQLP 549

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E +  L  +  LN+  N   L  LP SIG + SL  L++  N++T LP +I  LR L+ L
Sbjct: 550 ESIGQLSKVVHLNLEGN--QLTQLPKSIGNMRSLYALNLKNNQLTKLPQTIQKLRGLRFL 607

Query: 181 SLEGNPL 187
            L+ NP+
Sbjct: 608 LLDKNPI 614



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 116/237 (48%), Gaps = 46/237 (19%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+S+   L  ++VL V  NQL  LP +IG LS+L+ L++  N L  LP+ +    +L +
Sbjct: 341 LPDSI-GNLAQLMVLSVARNQLDALPATIGKLSELRELNLEQNQLSCLPQQVTQILTLTQ 399

Query: 62  LNANFNKLRQLP-----------------------DTIGFELINLKTLSINCNKIVILPQ 98
           L   +NKL  LP                        ++G +L NL  LS++ NK+  LP 
Sbjct: 400 LKLTYNKLTHLPPKLSNLQQLSLLNLSYNQLQVLPKSLG-KLKNLHQLSVDGNKLTHLPP 458

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI---------------------SQN 137
            + +L  L +L+   N L+ LP+ L  L NL  L++                     S N
Sbjct: 459 GIGNLHRLSLLNLSYNQLQVLPKSLGKLKNLHQLSVDGNKLTELPKIIYDLKKLFLLSLN 518

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +  L  LP SIG L  +V L++  N++T LP+SIG L K+  L+LEGN L   P  +
Sbjct: 519 YNALTALPESIGQLSKVVHLNLEGNQLTQLPESIGQLSKVVHLNLEGNQLTQLPKSI 575



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/181 (35%), Positives = 109/181 (60%), Gaps = 3/181 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L++  N+  C+P +IG LSKL    +  + +++LP+T+    +L+ L  +  +++QLP++
Sbjct: 216 LNLSGNKFHCVPVNIGKLSKLVTFTLKSDRIKALPETMGTLSNLQNLTLSSCRIQQLPES 275

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           +  +L  +  L+++ N+I   P  +T L+SL  L  + N LK LPE + NL  L  L++S
Sbjct: 276 MQ-QLKQIGKLALDNNRIEKFPAVITKLSSLVYLKLQKNQLKHLPESIGNLRKLSHLSLS 334

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            N  +L+ LP SIG L  L+ L V+ N++  LP +IG L +L++L+LE N L   P  V 
Sbjct: 335 NN--HLKKLPDSIGNLAQLMVLSVARNQLDALPATIGKLSELRELNLEQNQLSCLPQQVT 392

Query: 196 E 196
           +
Sbjct: 393 Q 393



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/210 (36%), Positives = 111/210 (52%), Gaps = 26/210 (12%)

Query: 5   SLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNA 64
           ++  +L ++V L +  NQLK LP SIG L KL  L +S N L+ LP +I N   L  L+ 
Sbjct: 297 AVITKLSSLVYLKLQKNQLKHLPESIGNLRKLSHLSLSNNHLKKLPDSIGNLAQLMVLSV 356

Query: 65  NFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTH---LTSLRVLDARL-------- 113
             N+L  LP TIG +L  L+ L++  N++  LPQ +T    LT L++   +L        
Sbjct: 357 ARNQLDALPATIG-KLSELRELNLEQNQLSCLPQQVTQILTLTQLKLTYNKLTHLPPKLS 415

Query: 114 ------------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSY 161
                       N L+ LP+ L  L NL  L++  N   L  LP  IG L  L  L++SY
Sbjct: 416 NLQQLSLLNLSYNQLQVLPKSLGKLKNLHQLSVDGN--KLTHLPPGIGNLHRLSLLNLSY 473

Query: 162 NKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           N++  LP S+G L+ L +LS++GN L   P
Sbjct: 474 NQLQVLPKSLGKLKNLHQLSVDGNKLTELP 503



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 108/211 (51%), Gaps = 23/211 (10%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+  +L  +  L + +N+++  P  I  LS L  L +  N L+ LP++I N R L  
Sbjct: 272 LPESM-QQLKQIGKLALDNNRIEKFPAVITKLSSLVYLKLQKNQLKHLPESIGNLRKLSH 330

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N L++LPD+IG  L  L  LS+  N++  LP ++  L+ LR L+   N L  LP+
Sbjct: 331 LSLSNNHLKKLPDSIG-NLAQLMVLSVARNQLDALPATIGKLSELRELNLEQNQLSCLPQ 389

Query: 122 DLENLINLEVLNISQN---------------------FQYLETLPYSIGLLMSLVELDVS 160
            +  ++ L  L ++ N                     +  L+ LP S+G L +L +L V 
Sbjct: 390 QVTQILTLTQLKLTYNKLTHLPPKLSNLQQLSLLNLSYNQLQVLPKSLGKLKNLHQLSVD 449

Query: 161 YNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            NK+T LP  IG L +L  L+L  N L   P
Sbjct: 450 GNKLTHLPPGIGNLHRLSLLNLSYNQLQVLP 480



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 104/184 (56%), Gaps = 3/184 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  +V   + S+++K LP ++G LS L+ L +S   ++ LP++++  + + +L  + N
Sbjct: 231 GKLSKLVTFTLKSDRIKALPETMGTLSNLQNLTLSSCRIQQLPESMQQLKQIGKLALDNN 290

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           ++ + P  I  +L +L  L +  N++  LP+S+ +L  L  L    N LK LP+ + NL 
Sbjct: 291 RIEKFPAVIT-KLSSLVYLKLQKNQLKHLPESIGNLRKLSHLSLSNNHLKKLPDSIGNLA 349

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L VL++++N   L+ LP +IG L  L EL++  N+++ LP  +  +  L +L L  N L
Sbjct: 350 QLMVLSVARN--QLDALPATIGKLSELRELNLEQNQLSCLPQQVTQILTLTQLKLTYNKL 407

Query: 188 VSPP 191
              P
Sbjct: 408 THLP 411



 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 62/190 (32%), Positives = 93/190 (48%), Gaps = 22/190 (11%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELIN 82
           L+ LP  +  + K++ L +  N L  +P  I     L+ELN N N+L + P  I   L  
Sbjct: 154 LEKLPPLVFQIPKIQTLCLQSNRLTEIPTEINQLTHLQELNLNNNQLTEFPLAIT-HLTT 212

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS------- 135
           LK+L+++ NK   +P ++  L+ L     + + +K+LPE +  L NL+ L +S       
Sbjct: 213 LKSLNLSGNKFHCVPVNIGKLSKLVTFTLKSDRIKALPETMGTLSNLQNLTLSSCRIQQL 272

Query: 136 -QNFQYL-------------ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            ++ Q L             E  P  I  L SLV L +  N++  LP+SIG LRKL  LS
Sbjct: 273 PESMQQLKQIGKLALDNNRIEKFPAVITKLSSLVYLKLQKNQLKHLPESIGNLRKLSHLS 332

Query: 182 LEGNPLVSPP 191
           L  N L   P
Sbjct: 333 LSNNHLKKLP 342


>gi|345322696|ref|XP_001505628.2| PREDICTED: leucine-rich repeat-containing protein 40
           [Ornithorhynchus anatinus]
          Length = 612

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/214 (35%), Positives = 117/214 (54%), Gaps = 31/214 (14%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P S +  L N+V L++  NQLK LP  I  + +LK LD + NLLE++P  + +  SLE 
Sbjct: 197 VPASFST-LTNLVRLNLARNQLKSLPTEISGMKRLKQLDCTCNLLETIPSELASMESLEL 255

Query: 62  LNANFNKLRQLPDTIGFELI-NLKTLSINCNKI-VILPQSLTHLTSLRVLDARLNCLKSL 119
           L    NKLR +P+   F    +LK L +  N+I VI  + L HL+S+ VLD R N LKS+
Sbjct: 256 LYLRRNKLRSIPE---FPFCRSLKELHVGENQIEVIGAEHLKHLSSINVLDLRDNKLKSI 312

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P++                         I LL +L  LD++ N I++LP ++G L  L+ 
Sbjct: 313 PDE-------------------------ITLLQALERLDLTNNDISSLPYALGNLPHLKF 347

Query: 180 LSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNND 213
           L+LEGNP+ +   D++ +G   +  YL  K+ +D
Sbjct: 348 LALEGNPMRTIRRDLLTKGTQELMKYLRSKIKDD 381



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/173 (37%), Positives = 104/173 (60%), Gaps = 4/173 (2%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           + VLDVH NQL  LP ++G L  L+ L+VS N L+ LP+ I+N R+L+ L    N+L  +
Sbjct: 115 LTVLDVHDNQLASLPCAVGELENLQRLNVSHNKLKILPEEIKNLRNLKSLFLQNNELTCI 174

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P+  G +L+NL+ L I+ N +  +P S + LT+L  L+   N LKSLP ++  +  L+ L
Sbjct: 175 PEGFG-QLLNLEELDISNNHLSSVPASFSTLTNLVRLNLARNQLKSLPTEISGMKRLKQL 233

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           + + N   LET+P  +  + SL  L +  NK+ ++P+   C R L++L +  N
Sbjct: 234 DCTCNL--LETIPSELASMESLELLYLRRNKLRSIPEFPFC-RSLKELHVGEN 283



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 93/172 (54%), Gaps = 3/172 (1%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L+ L + +  L  L VLDV  N L SLP  +    +L+ LN + NKL+ LP+ I   
Sbjct: 99  NNKLQTLSDDLRLLPALTVLDVHDNQLASLPCAVGELENLQRLNVSHNKLKILPEEIK-N 157

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NLK+L +  N++  +P+    L +L  LD   N L S+P     L NL  LN+++N  
Sbjct: 158 LRNLKSLFLQNNELTCIPEGFGQLLNLEELDISNNHLSSVPASFSTLTNLVRLNLARN-- 215

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            L++LP  I  +  L +LD + N + T+P  +  +  L+ L L  N L S P
Sbjct: 216 QLKSLPTEISGMKRLKQLDCTCNLLETIPSELASMESLELLYLRRNKLRSIP 267



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 96/162 (59%), Gaps = 3/162 (1%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           + L  L +S N L++L   +    +L  L+ + N+L  LP  +G EL NL+ L+++ NK+
Sbjct: 90  TDLTKLILSNNKLQTLSDDLRLLPALTVLDVHDNQLASLPCAVG-ELENLQRLNVSHNKL 148

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
            ILP+ + +L +L+ L  + N L  +PE    L+NLE L+IS N  +L ++P S   L +
Sbjct: 149 KILPEEIKNLRNLKSLFLQNNELTCIPEGFGQLLNLEELDISNN--HLSSVPASFSTLTN 206

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
           LV L+++ N++ +LP  I  +++L++L    N L + P ++ 
Sbjct: 207 LVRLNLARNQLKSLPTEISGMKRLKQLDCTCNLLETIPSELA 248



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 6/205 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSI-GCLSKLKV--LDVSGNLLESLPKTI-ENCRSLEELNAN 65
           ++ + +L+    Q   +P+ +   + +  V  ++ S N L  +PK I E   ++ ++N +
Sbjct: 408 IVTLKILEYSEKQTTAIPDEVFDAVGRNTVTSINFSKNQLNEVPKRIVELKETVSDVNLS 467

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
           FNKL  +   I   L  L  L I  N +  LP  ++ L  L+ ++   N  K+ P+ L  
Sbjct: 468 FNKLSLISLEISV-LQKLTHLDIRNNLLTALPDEMSALKKLQTINLSFNRFKTFPDVLYC 526

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           +  LE +  S N Q        +  +  L  LD+  N +  +P  +G    L+ L LEGN
Sbjct: 527 IPTLETILFSNN-QVGSVDALRMKKMDKLATLDLQNNDLLQVPPELGNCMTLRTLLLEGN 585

Query: 186 PLVSPPMDVVEQGLSAVKGYLSEKM 210
           P   P   ++ +G +AV  YL +++
Sbjct: 586 PFRIPRAAILAKGTAAVLEYLRDRI 610



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 61/114 (53%), Gaps = 2/114 (1%)

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
           +E  +L  L ++ NK+  L   L  L +L VLD   N L SLP  +  L NL+ LN+S N
Sbjct: 87  WEQTDLTKLILSNNKLQTLSDDLRLLPALTVLDVHDNQLASLPCAVGELENLQRLNVSHN 146

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
              L+ LP  I  L +L  L +  N++T +P+  G L  L++L +  N L S P
Sbjct: 147 --KLKILPEEIKNLRNLKSLFLQNNELTCIPEGFGQLLNLEELDISNNHLSSVP 198



 Score = 45.1 bits (105), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 95/231 (41%), Gaps = 54/231 (23%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L ++ VLD+  N+LK +P+ I  L  L+ LD++ N + SLP  + N   L+ L    N +
Sbjct: 296 LSSINVLDLRDNKLKSIPDEITLLQALERLDLTNNDISSLPYALGNLPHLKFLALEGNPM 355

Query: 70  RQLPDTIGFELINLKTLS---------------------------------INCNKIV-- 94
           R    TI  +L+   T                                   +N + IV  
Sbjct: 356 R----TIRRDLLTKGTQELMKYLRSKIKDDAPPQNETTTTGTAMTLPSESRVNVHAIVTL 411

Query: 95  -ILPQSLTHLTSL--RVLDA-----------RLNCLKSLPEDLENLINLEVLNISQNFQY 140
            IL  S    T++   V DA             N L  +P+ +  L    V +++ +F  
Sbjct: 412 KILEYSEKQTTAIPDEVFDAVGRNTVTSINFSKNQLNEVPKRIVELKE-TVSDVNLSFNK 470

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L  +   I +L  L  LD+  N +T LPD +  L+KLQ ++L  N   + P
Sbjct: 471 LSLISLEISVLQKLTHLDIRNNLLTALPDEMSALKKLQTINLSFNRFKTFP 521


>gi|395735872|ref|XP_003776656.1| PREDICTED: protein LAP2 isoform 2 [Pongo abelii]
          Length = 1419

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 110/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+S 
Sbjct: 235 LDVSKNNI-----EMVEEGIST 251



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  L+  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTA 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I    S+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+T + + N +  LP  +    ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++ + L N+  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    +L 
Sbjct: 267 QLPETIGS-LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-SWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|418710225|ref|ZP_13270998.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410769454|gb|EKR44694.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 244

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 101/178 (56%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  + VL++  NQ   LP  IG L  L+ LD+ GN   SLPK I   ++L  LN   N
Sbjct: 37  GQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGN 96

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L  L+ L+++ N+  I P+ +    SL+ L    + LK+LP+++  L 
Sbjct: 97  QLTSLPKEIG-QLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQ 155

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ L++  N   L +LP  IG L SL EL++  NK+ TLP  IG L+ LQ L L  N
Sbjct: 156 NLQSLHLDSN--QLTSLPKEIGQLQSLFELNLQDNKLKTLPKEIGQLQNLQVLRLYSN 211



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 113/195 (57%), Gaps = 4/195 (2%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L++  NQL  LP  IG L KL+VL+++GN   SLPK I   ++LE L+ + N+   
Sbjct: 18  NLEKLNLDGNQLTTLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTS 77

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ L++  N++  LP+ +  L  L  L+   N     P+++    +L+ 
Sbjct: 78  LPKEIG-QLQNLRVLNLAGNQLTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKW 136

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +S +   L+TLP  I LL +L  L +  N++T+LP  IG L+ L +L+L+ N L + P
Sbjct: 137 LRLSGD--QLKTLPKEILLLQNLQSLHLDSNQLTSLPKEIGQLQSLFELNLQDNKLKTLP 194

Query: 192 MDVVE-QGLSAVKGY 205
            ++ + Q L  ++ Y
Sbjct: 195 KEIGQLQNLQVLRLY 209



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 2/82 (2%)

Query: 113 LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
           L+ L+SLP  +    NLE LN+  N   L TLP  IG L  L  L+++ N+ T+LP  IG
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGN--QLTTLPKEIGQLQKLRVLNLAGNQFTSLPKEIG 60

Query: 173 CLRKLQKLSLEGNPLVSPPMDV 194
            L+ L++L L+GN   S P ++
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEI 82


>gi|341898766|gb|EGT54701.1| hypothetical protein CAEBREN_32822 [Caenorhabditis brenneri]
          Length = 375

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/200 (39%), Positives = 106/200 (53%), Gaps = 6/200 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A   N+ +LDV  N L  LP  IG L+ LK L    NLLE LPK ++   ++E L  + N
Sbjct: 80  ATFSNISMLDVSFNSLSALPEDIGTLTNLKTLIARNNLLEHLPKGMQLLENMEHLYLSGN 139

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I   +  LKTL +  N+I   P +++ LTSL V     N L+ +P  +  L 
Sbjct: 140 RLEYLPPVI-LTMRKLKTLHLGGNRIDSCPSNISVLTSLTVFYLGGNRLREIPASIGCLD 198

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L +  N   LET+P ++G L  L  L +  NK+ TLP  I  LR+LQ+LSL  NPL
Sbjct: 199 QLENLGLCDNI--LETIPSTLGDLHYLETLSLHNNKLRTLPTDILNLRRLQQLSLRNNPL 256

Query: 188 VSP---PMDVVEQGLSAVKG 204
           V      MD+    L  + G
Sbjct: 257 VHSFVHNMDLAPPSLKELSG 276


>gi|116497081|gb|AAI26465.1| Erbb2 interacting protein [Homo sapiens]
          Length = 1371

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGL- 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 110/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+S 
Sbjct: 235 LDVSKNNI-----EMVEEGIST 251



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 106/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE +  L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGLLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  L+  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I    S+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPETIGLLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+T + + N +  LP  +    ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++   L N+  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    +L 
Sbjct: 267 QLPETI-GLLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-SWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|418677100|ref|ZP_13238378.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|418742577|ref|ZP_13298947.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|400323000|gb|EJO70856.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|410749952|gb|EKR06935.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 243

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 109/177 (61%), Gaps = 3/177 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++   +L  LP  IG L  L+ L +S N L  LPK I   ++LE L+ + N+L 
Sbjct: 48  LDVRVLNLSGQKLTSLPKEIGQLKNLQSLYLSDNQLTILPKEIVELQNLEHLDLSENQLV 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ IG  L NL++L +  NK+  LP+ +  L +L++L +  N L  LP+++  L NLE
Sbjct: 108 ILPNEIG-RLKNLQSLDLYKNKLTTLPKEIGQLENLQMLWSPENRLAILPKEIGQLENLE 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LN+S+N   L T+P  IG L +L +LD+  N++TTL D IG L+ LQKL L  N L
Sbjct: 167 NLNLSEN--RLTTVPKEIGQLQNLQKLDLKGNRLTTLSDEIGQLKNLQKLYLIDNQL 221



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/154 (41%), Positives = 97/154 (62%), Gaps = 3/154 (1%)

Query: 36  LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           ++VL++SG  L SLPK I   ++L+ L  + N+L  LP  I  EL NL+ L ++ N++VI
Sbjct: 50  VRVLNLSGQKLTSLPKEIGQLKNLQSLYLSDNQLTILPKEI-VELQNLEHLDLSENQLVI 108

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           LP  +  L +L+ LD   N L +LP+++  L NL++L   +N   L  LP  IG L +L 
Sbjct: 109 LPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLENLQMLWSPEN--RLAILPKEIGQLENLE 166

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
            L++S N++TT+P  IG L+ LQKL L+GN L +
Sbjct: 167 NLNLSENRLTTVPKEIGQLQNLQKLDLKGNRLTT 200



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 78/135 (57%), Gaps = 1/135 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  LD+  NQL  LPN IG L  L+ LD+  N L +LPK I    +L+ L +  N
Sbjct: 91  VELQNLEHLDLSENQLVILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLENLQMLWSPEN 150

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L+++ N++  +P+ +  L +L+ LD + N L +L +++  L 
Sbjct: 151 RLAILPKEIG-QLENLENLNLSENRLTTVPKEIGQLQNLQKLDLKGNRLTTLSDEIGQLK 209

Query: 128 NLEVLNISQNFQYLE 142
           NL+ L +  N   LE
Sbjct: 210 NLQKLYLIDNQLSLE 224



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 65/114 (57%), Gaps = 2/114 (1%)

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
           ++++ L+++  K+  LP+ +  L +L+ L    N L  LP+++  L NLE L++S+N   
Sbjct: 48  LDVRVLNLSGQKLTSLPKEIGQLKNLQSLYLSDNQLTILPKEIVELQNLEHLDLSEN--Q 105

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L  LP  IG L +L  LD+  NK+TTLP  IG L  LQ L    N L   P ++
Sbjct: 106 LVILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLENLQMLWSPENRLAILPKEI 159



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVL+     L SLP+++  L NL+ L +S N   L  LP  I  L +L 
Sbjct: 40  LTKALQNPLDVRVLNLSGQKLTSLPKEIGQLKNLQSLYLSDN--QLTILPKEIVELQNLE 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LD+S N++  LP+ IG L+ LQ L L  N L + P ++
Sbjct: 98  HLDLSENQLVILPNEIGRLKNLQSLDLYKNKLTTLPKEI 136


>gi|296491199|tpg|DAA33272.1| TPA: leucine-rich repeats and IQ motif containing 4 [Bos taurus]
          Length = 506

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 112/225 (49%), Gaps = 30/225 (13%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN-- 67
           L N+ VL +  N++  LP+  G LSKLK+L ++GN   S PK I +  SLE+L    +  
Sbjct: 261 LKNLEVLALDDNKICQLPSDFGSLSKLKILGLTGNQFSSFPKEILSLASLEKLYIGQDEG 320

Query: 68  -KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENL 126
            KL  LP+ I   L NLK L I  N +  LP SL  + +L +LD   N +K LP+     
Sbjct: 321 AKLTHLPECIK-RLQNLKELYIENNHLEYLPVSLGSMPNLEILDCHCNLIKQLPD----- 374

Query: 127 INLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
                               +I    +L EL    N IT LP+++  L  L+ L+L GNP
Sbjct: 375 --------------------AICQAQALKELRFEDNLITYLPENLDSLVNLEVLTLTGNP 414

Query: 187 LVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWV-GKLVKYG 230
           +  PPM V  +G  AV  YL E+ N    + K ++W  G +V+ G
Sbjct: 415 MEEPPMSVCAKGTEAVWEYLRERRNMKELATKIQAWWRGMMVRKG 459



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 78/158 (49%), Gaps = 6/158 (3%)

Query: 42  SGNLLESLPKTIENCRSLEELNANFNKLRQLP----DTIGFELINLKTLSINCNKIVILP 97
           +GN L+SLPK I N   L E++   N+    P    D     L  +  + ++ N +  +P
Sbjct: 150 AGNHLKSLPKEIVNQTKLREIHLKHNQFAAFPLELCDLYNLXLSQMTEVGLSGNHLEKIP 209

Query: 98  QSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVEL 157
           + L   TSL +L      L+ L      L+NL+ L++SQNF  LE  P  I  L +L  L
Sbjct: 210 RLLCRWTSLFLLYLHNTGLRVLRRSFRRLVNLQFLDLSQNF--LEHCPLQICSLKNLEVL 267

Query: 158 DVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            +  NKI  LP   G L KL+ L L GN   S P +++
Sbjct: 268 ALDDNKICQLPSDFGSLSKLKILGLTGNQFSSFPKEIL 305



 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 107/265 (40%), Gaps = 78/265 (29%)

Query: 3   PESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEEL 62
           P+ ++ R   +  +D  +  L  +P  I  L +L+ + +  NL+  +PK I++ R +  L
Sbjct: 20  PQQVSDR---IFFIDASNQSLLTIPEDILALRELEEVHLENNLIAEIPKDIQHLRKIRVL 76

Query: 63  NANFNKLRQLPDTIGFELINLKTLSINCN-----------------------------KI 93
             N NKL+ L   +G  L NL+ L ++ N                              +
Sbjct: 77  YLNKNKLKNLCPEMG-RLSNLEGLDLSDNPLEASSLPVLSGIRQLRELRLYRTDLADIPV 135

Query: 94  VI-------------------LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
           VI                   LP+ + + T LR +  + N   + P +L +L NL +  +
Sbjct: 136 VICKLLHHLELLGLAGNHLKSLPKEIVNQTKLREIHLKHNQFAAFPLELCDLYNLXLSQM 195

Query: 135 SQ---NFQYLETLP--------------YSIGL---------LMSLVELDVSYNKITTLP 168
           ++   +  +LE +P              ++ GL         L++L  LD+S N +   P
Sbjct: 196 TEVGLSGNHLEKIPRLLCRWTSLFLLYLHNTGLRVLRRSFRRLVNLQFLDLSQNFLEHCP 255

Query: 169 DSIGCLRKLQKLSLEGNPLVSPPMD 193
             I  L+ L+ L+L+ N +   P D
Sbjct: 256 LQICSLKNLEVLALDDNKICQLPSD 280



 Score = 37.4 bits (85), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 3/137 (2%)

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           ++A+   L  +P+ I   L  L+ + +  N I  +P+ + HL  +RVL    N LK+L  
Sbjct: 30  IDASNQSLLTIPEDI-LALRELEEVHLENNLIAEIPKDIQHLRKIRVLYLNKNKLKNLCP 88

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI-GCLRKLQKL 180
           ++  L NLE L++S N     +LP   G +  L EL +    +  +P  I   L  L+ L
Sbjct: 89  EMGRLSNLEGLDLSDNPLEASSLPVLSG-IRQLRELRLYRTDLADIPVVICKLLHHLELL 147

Query: 181 SLEGNPLVSPPMDVVEQ 197
            L GN L S P ++V Q
Sbjct: 148 GLAGNHLKSLPKEIVNQ 164


>gi|335292043|ref|XP_001927723.2| PREDICTED: leucine-rich repeat-containing protein 1 [Sus scrofa]
          Length = 524

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/193 (39%), Positives = 111/193 (57%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 120 LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 179 LDLGNNEIYNLPESIG-ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPE 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L  L ISQN   LE LP  IG L  L  L V  N++T LP++IG    L +L 
Sbjct: 238 EISGLTSLTDLVISQNL--LEMLPDGIGKLKKLSILKVDQNRLTQLPEAIGDCESLTELV 295

Query: 182 LEGNPLVSPPMDV 194
           L  N L++ P  +
Sbjct: 296 LTENRLLTLPKSI 308



 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 107/195 (54%), Gaps = 7/195 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   AR L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L
Sbjct: 27  VPEEIYRYARSLEELLLD--ANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP+S   L +L  L      L+SL
Sbjct: 85  VELDVSRNDIPEIPESISF-CKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++ NL NL  L + +N   L  LP S+  L  L ELD+  N+I  LP+SIG L  L+ 
Sbjct: 144 PENIGNLYNLASLELRENL--LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKD 201

Query: 180 LSLEGNPLVSPPMDV 194
           L L+GN L   P ++
Sbjct: 202 LWLDGNQLSELPQEI 216



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 103/207 (49%), Gaps = 26/207 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP++    ++L  L+ N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDI 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD--------------ARL 113
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD              A L
Sbjct: 139 SLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALL 197

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L  LP+++ NL NL  L++S+N   LE LP  I  L SL +L +S N +
Sbjct: 198 HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN--RLERLPEEISGLTSLTDLVISQNLL 255

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPP 191
             LPD IG L+KL  L ++ N L   P
Sbjct: 256 EMLPDGIGKLKKLSILKVDQNRLTQLP 282



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 114/225 (50%), Gaps = 11/225 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+ A LL++  L +  NQL  LP  IG L  L  LDVS N LE LP+ I    SL +
Sbjct: 189 LPESIGA-LLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTD 247

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L  LPD IG +L  L  L ++ N++  LP+++    SL  L    N L +LP+
Sbjct: 248 LVISQNLLEMLPDGIG-KLKKLSILKVDQNRLTQLPEAIGDCESLTELVLTENRLLTLPK 306

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L  L  LN  +N   L +LP  IG   SL    V  N++T +P  +    +L  L 
Sbjct: 307 SIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLD 364

Query: 182 LEGNPLVSPPMDVVEQGLSAV-------KGYLSEKMNNDHKSPKK 219
           + GN L+  P+ +    L A+       +  L+ + + DH + +K
Sbjct: 365 VAGNRLLHLPLSLTTLKLKALWLSDNQSQPLLTFQTDTDHTTGEK 409



 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 2/138 (1%)

Query: 57  RSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
           R +E ++     L  +P+ I     +L+ L ++ N++  LP+    L  LR L    N +
Sbjct: 12  RHVETIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + LP ++ N + L  L++S+N   +  +P SI    +L   D S N +T LP+S   L+ 
Sbjct: 72  QRLPPEIANFMQLVELDVSRN--DIPEIPESISFCKALQIADFSGNPLTRLPESFPELQN 129

Query: 177 LQKLSLEGNPLVSPPMDV 194
           L  LS+    L S P ++
Sbjct: 130 LTCLSVNDISLQSLPENI 147


>gi|195570161|ref|XP_002103077.1| GD20236 [Drosophila simulans]
 gi|194199004|gb|EDX12580.1| GD20236 [Drosophila simulans]
          Length = 724

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 112/191 (58%), Gaps = 4/191 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP S     +++  L ++SN++  LP  IGCL  L+ L ++ N L SLP++++NC  L+
Sbjct: 218 VIP-STVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSLPESLQNCSQLK 276

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKL ++P  I + L +L TL +  N+I  +   L  L +L +L  R N ++ L 
Sbjct: 277 VLDLRHNKLAEIPPVI-YRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELG 335

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             +  L+NL  L++S N  +LE LP  IG  ++L  LD+ +N++  +PDSIG L+ L +L
Sbjct: 336 SAIGALVNLTTLDVSHN--HLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRL 393

Query: 181 SLEGNPLVSPP 191
            +  N L S P
Sbjct: 394 GMRYNRLSSVP 404



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 115/245 (46%), Gaps = 51/245 (20%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +    +N+  LD+  N+L  +P+SIG L  L  L +  N L S+P T++NC+S++E
Sbjct: 357 LPEDI-GNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPATLKNCKSMDE 415

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ------------SLTH------- 102
            N   N + QLPD +   L  L T++++ N+    P             +L H       
Sbjct: 416 FNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIP 475

Query: 103 ---------LTSLRV--------------------LDARLNCLKSLPEDLENLINLEVLN 133
                    LT L +                    L+   N L+ LP+D+ NL NLE+L 
Sbjct: 476 YGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILI 535

Query: 134 ISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMD 193
           +S N   L+ +P +IG L  L  LD+  N+I  LP  IG L +LQ+L L+ N +   P  
Sbjct: 536 LSNNM--LKKIPNTIGNLRRLRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPRS 593

Query: 194 VVEQG 198
           +   G
Sbjct: 594 IGHLG 598



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 97/161 (60%), Gaps = 2/161 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           +N+V L++ +N L+ LP+ I  L  L++L +S N+L+ +P TI N R L  L+   N++ 
Sbjct: 506 VNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIE 565

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG  L  L+ L +  N+I +LP+S+ HL +L  L    N L+ LPE++ +L +LE
Sbjct: 566 VLPHEIGL-LHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLE 624

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
            L I+QN   LE LP+ + L  +L  L++    ++T+P  I
Sbjct: 625 NLYINQN-PGLEKLPFELALCQNLKYLNIDKCPLSTIPPEI 664



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 26/180 (14%)

Query: 35  KLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
           ++K LD+S + +  +P T++ C  L EL    NK+ QLP  IG  L++L+ L++N N + 
Sbjct: 205 RIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGC-LVSLRNLALNENSLT 263

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLP-----------------------EDLENLINLEV 131
            LP+SL + + L+VLD R N L  +P                       +DL  L+NL +
Sbjct: 264 SLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTM 323

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L++ +N   +  L  +IG L++L  LDVS+N +  LP+ IG    L  L L+ N L+  P
Sbjct: 324 LSLREN--KIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIP 381



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 99/185 (53%), Gaps = 4/185 (2%)

Query: 3   PESLTARLLNVVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEE 61
           P    A+  NV  +++  N++  +P  I   +K L  L++  N+L +LP  I    ++ E
Sbjct: 451 PTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVE 510

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N L++LPD I   L NL+ L ++ N +  +P ++ +L  LR+LD   N ++ LP 
Sbjct: 511 LNLATNALQKLPDDI-MNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIEVLPH 569

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L  L+ L +  N   +  LP SIG L +L  L VS N +  LP+ IG L  L+ L 
Sbjct: 570 EIGLLHELQRLILQTN--QITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLY 627

Query: 182 LEGNP 186
           +  NP
Sbjct: 628 INQNP 632



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 103/188 (54%), Gaps = 4/188 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L+N+ +L +  N+++ L ++IG L  L  LDVS N LE LP+ I NC +L  L+   N+
Sbjct: 317 QLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNE 376

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLI 127
           L  +PD+IG  L +L  L +  N++  +P +L +  S+   +   N +  LP+  L +L 
Sbjct: 377 LLDIPDSIG-NLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLS 435

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNP 186
            L  + +S+N Q+            ++  +++ +N+I  +P  I    K L KL+++ N 
Sbjct: 436 GLTTITLSRN-QFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENM 494

Query: 187 LVSPPMDV 194
           L + P+D+
Sbjct: 495 LTALPLDI 502



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +P+ + A L  +  + +  NQ    P       + +  +++  N ++ +P  I    + L
Sbjct: 426 LPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGL 485

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N L  LP  IG   +N+  L++  N +  LP  + +L +L +L    N LK +
Sbjct: 486 TKLNMKENMLTALPLDIG-TWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKI 544

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  + NL  L +L++ +N   +E LP+ IGLL  L  L +  N+IT LP SIG L  L  
Sbjct: 545 PNTIGNLRRLRILDLEEN--RIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTH 602

Query: 180 LSLEGNPLVSPPMDV 194
           LS+  N L   P ++
Sbjct: 603 LSVSENNLQFLPEEI 617


>gi|421118974|ref|ZP_15579301.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348314|gb|EKO99140.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 379

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 128/227 (56%), Gaps = 11/227 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L N+  L++  NQ+K +P  I  L KL+ L +  N L +LP+ I   ++L+ 
Sbjct: 155 LPQEI-GQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQS 213

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+L  LP  IG  L NL+ L +  N++ ILP  +  L +L+ L+ R N L +L +
Sbjct: 214 LYLPNNQLTTLPQEIGH-LQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSK 272

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++E L NL+ L++  N   L T P  I  L +L  LD+  N++TTLP+ IG L+ LQ L 
Sbjct: 273 EIEQLQNLKSLDLRSN--QLTTFPKEIEQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLD 330

Query: 182 LEGNPLVSPPMDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
           L+ N L + P ++ + Q L  +       +NN+  S ++K  + KL+
Sbjct: 331 LDSNQLTTLPQEIGQLQNLQEL------FLNNNQLSSQEKKRIRKLL 371



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L+++ NQL  LP  IG L  L+ L++S N ++++PK IE  + L+ L    N
Sbjct: 68  GKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L  L+ L +  N++  LPQ +  L +L+ L+   N +K++P+++E L 
Sbjct: 128 QLTTLPQEIG-QLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQ 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L +  N   L TLP  IG L +L  L +  N++TTLP  IG L+ LQ L L  N L
Sbjct: 187 KLQSLGLDNN--QLTTLPQEIGQLQNLQSLYLPNNQLTTLPQEIGHLQNLQDLYLVSNQL 244

Query: 188 VSPPMDV 194
              P ++
Sbjct: 245 TILPNEI 251



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 106/184 (57%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V  LD+ +N+ K LP  IG L  L+ L+++ N L  LPK I   ++L +LN + N+++
Sbjct: 48  LKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIK 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            +P  I  +L  L++L +  N++  LPQ +  L  L+ L    N L +LP+++  L NL+
Sbjct: 108 TIPKEIE-KLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLK 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+S  +  ++T+P  I  L  L  L +  N++TTLP  IG L+ LQ L L  N L + 
Sbjct: 167 SLNLS--YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLYLPNNQLTTL 224

Query: 191 PMDV 194
           P ++
Sbjct: 225 PQEI 228



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R LD   N  K+LP+++  L NL+ LN+++N   L  LP  IG L +L 
Sbjct: 40  LAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKN--QLTILPKEIGQLKNLR 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +L++S N+I T+P  I  L+KLQ L L  N L + P ++
Sbjct: 98  KLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEI 136


>gi|421119254|ref|ZP_15579578.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347884|gb|EKO98735.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 428

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 111/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD++ N+L  LP  IG L  L+ L +S N L +LP+      +L+ELN + N
Sbjct: 114 GKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDN 173

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+TL++  N++  L + +  L +L+ L+   N L +LP ++  L 
Sbjct: 174 QLTTLPQEIG-QLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQ 232

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  LN+S N   L  L   +G L +L  L++S N++TTLP  IG L+ L  L+L GN L
Sbjct: 233 NLHTLNLSDN--QLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQL 290

Query: 188 VSPPMDV 194
            + P+++
Sbjct: 291 TTLPIEI 297



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 105/184 (57%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           LNV VLD+       LP  I  L  L+ L +  N L++LPK I   ++L+ELN + N+L 
Sbjct: 48  LNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLT 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG +L NL+ L +  N++ ILP  +  L +L+ L    N L +LP +   L NL+
Sbjct: 108 ILPKEIG-KLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+S N   L TLP  IG L +L  L++  N++TTL   I  L+ LQ L+L  N L + 
Sbjct: 167 ELNLSDN--QLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTL 224

Query: 191 PMDV 194
           P+++
Sbjct: 225 PIEI 228



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 109/186 (58%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L++  NQL  LP  IG L  L  L++S N L  L   +   ++L  LN + N+
Sbjct: 207 QLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQ 266

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG +L NL TL+++ N++  LP  +  L +L+ L+   N L +L +++E L N
Sbjct: 267 LTTLPIEIG-KLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKN 325

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L++S  +  L  LP  IG L +L EL++  N++T LP  IG L+ LQ LSL  N L+
Sbjct: 326 LQTLSLS--YNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLM 383

Query: 189 SPPMDV 194
           + P ++
Sbjct: 384 TFPKEI 389



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/180 (38%), Positives = 104/180 (57%), Gaps = 3/180 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L +  N+LK LP  IG L  L+ L++S N L  LPK I    +L+ L+   N+
Sbjct: 69  QLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNR 128

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG +L NL+TL ++ N++  LP+    L +L+ L+   N L +LP+++  L N
Sbjct: 129 LTILPIEIG-KLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQN 187

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ LN+  N   L TL   I  L +L  L++S N++TTLP  IG L+ L  L+L  N L 
Sbjct: 188 LQTLNLKSN--QLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLA 245



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/177 (36%), Positives = 97/177 (54%), Gaps = 3/177 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  NQL  L   +G L  L  L++S N L +LP  I   ++L  LN + N
Sbjct: 229 GKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGN 288

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L+++ N++  L + +  L +L+ L    N L  LP+++  L 
Sbjct: 289 QLTTLPIEIG-KLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQ 347

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEG 184
           NL+ LN+  N   L  LP  IG L +L  L +  N++ T P  IG L+ LQ L L G
Sbjct: 348 NLQELNLWNN--QLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGG 402



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 60/99 (60%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +  ++RVLD       +LP+++E L NL+ L +  N   L+TLP  IG L +L 
Sbjct: 40  LTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDN--RLKTLPKEIGQLKNLQ 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           EL++S N++T LP  IG L  LQ+L L  N L   P+++
Sbjct: 98  ELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEI 136


>gi|418688837|ref|ZP_13249972.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400361995|gb|EJP17948.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 377

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/181 (39%), Positives = 105/181 (58%), Gaps = 3/181 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L +  NQ    P  IG L  LKVL ++ N +  LP  I   + L+ L  + N+
Sbjct: 182 QLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQ 241

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  I  +L NL+TL ++ N++ ILP+ +  L +L+ LD R N LK+LP+++E L N
Sbjct: 242 LITLPKEIE-QLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKN 300

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S N   L  LP  IG L +L+ L + YN++TTLP+ I  L+ LQ L L  N   
Sbjct: 301 LQTLFLSNN--QLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFS 358

Query: 189 S 189
           S
Sbjct: 359 S 359



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/194 (37%), Positives = 109/194 (56%), Gaps = 4/194 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +  +L N+ +L + SN+L  L   I  L  LK LD+S N L +LP  IE  ++L+
Sbjct: 129 VLPQEI-EQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLK 187

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L  + N+    P  IG +L NLK L +N N+I ILP  +  L  L+ L    N L +LP
Sbjct: 188 SLYLSENQFATFPKEIG-QLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLP 246

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++E L NL+ L++S N   L  LP  +G L +L  LD+  N++ TLP  I  L+ LQ L
Sbjct: 247 KEIEQLKNLQTLDLSYN--QLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTL 304

Query: 181 SLEGNPLVSPPMDV 194
            L  N L   P ++
Sbjct: 305 FLSNNQLTILPQEI 318



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 107/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +H NQL  LP  I  L  L++L +  N L +LPK IE  ++L+ L+   N
Sbjct: 66  GKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L +  N++  L + +  L +L+ LD   N L +LP ++E L 
Sbjct: 126 QLTVLPQEIE-QLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLK 184

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +S+N     T P  IG L +L  L ++ N+IT LP+ I  L+KLQ L L  N L
Sbjct: 185 NLKSLYLSEN--QFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQL 242

Query: 188 VSPPMDV 194
           ++ P ++
Sbjct: 243 ITLPKEI 249



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 107/186 (57%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ VLD+ SNQL  LP  I  L  L++L +  N L +L K IE  ++L+ L+ + N+
Sbjct: 113 QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQ 172

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP+ I  +L NLK+L ++ N+    P+ +  L +L+VL    N +  LP ++  L  
Sbjct: 173 LTTLPNEIE-QLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKK 231

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S N   L TLP  I  L +L  LD+SYN++T LP  +G L  LQ L L  N L 
Sbjct: 232 LQYLYLSDN--QLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLK 289

Query: 189 SPPMDV 194
           + P ++
Sbjct: 290 TLPKEI 295



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 104/186 (55%), Gaps = 3/186 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V VLD+   +LK LP  IG L  L+ L +  N L  LP+ IE  ++L+ L    N+L 
Sbjct: 46  LEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLT 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  I  +L NL+ L +  N++ +LPQ +  L +L++L  R N L +L +D+E L NL+
Sbjct: 106 TLPKEIE-QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLK 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++S N   L TLP  I  L +L  L +S N+  T P  IG L+ L+ L L  N +   
Sbjct: 165 SLDLSNN--QLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 191 PMDVVE 196
           P ++ +
Sbjct: 223 PNEIAK 228



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 92/161 (57%), Gaps = 4/161 (2%)

Query: 48  SLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
            L K ++N   +  L+ +  +L+ LP  IG +L NL+ L ++ N++ +LPQ +  L +L+
Sbjct: 37  DLTKALQNPLEVRVLDLSRQELKTLPIEIG-KLKNLQRLYLHYNQLTVLPQEIEQLKNLQ 95

Query: 108 VLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
           +L  R N L +LP+++E L NL+VL++  N   L  LP  I  L +L  L +  N++TTL
Sbjct: 96  LLYLRSNRLTTLPKEIEQLKNLQVLDLGSN--QLTVLPQEIEQLKNLQLLYLRSNRLTTL 153

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSE 208
              I  L+ L+ L L  N L + P + +EQ  +    YLSE
Sbjct: 154 SKDIEQLQNLKSLDLSNNQLTTLPNE-IEQLKNLKSLYLSE 193



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/130 (37%), Positives = 74/130 (56%), Gaps = 1/130 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A+L  +  L +  NQL  LP  I  L  L+ LD+S N L  LPK +    +L+ L+   N
Sbjct: 227 AKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN 286

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  I  +L NL+TL ++ N++ ILPQ +  L +L  L    N L +LP ++E L 
Sbjct: 287 QLKTLPKEIE-QLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK 345

Query: 128 NLEVLNISQN 137
           NL+ L ++ N
Sbjct: 346 NLQTLYLNNN 355


>gi|149040409|gb|EDL94447.1| soc-2 (suppressor of clear) homolog (C. elegans), isoform CRA_b
           [Rattus norvegicus]
          Length = 524

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 105/187 (56%), Gaps = 3/187 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L  +  L ++SN+L+ LP  +GCL  L  L +S N L SLP +++N + L  L+   NKL
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 181

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           R++P  + + L +L TL +  N+I  + + + +L  L  L  R N +K LP ++  L NL
Sbjct: 182 REIPSVV-YRLDSLTTLYLRFNRITAVEKDVRNLPRLSTLSIRENKIKQLPAEIGELCNL 240

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
             L+++ N   LE LP  IG    +  LD+ +N++  LPD+IG L  L +L L  N L +
Sbjct: 241 ITLDVAHN--QLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSA 298

Query: 190 PPMDVVE 196
            P  + +
Sbjct: 299 IPRSLAK 305



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 101/185 (54%), Gaps = 12/185 (6%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
            L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  +  L+   N+L  LPD
Sbjct: 219 TLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEVLN 133
           TIG  L +L  L +  N++  +P+SL   ++L  L+   N + +LPE  L +L+ L  L 
Sbjct: 279 TIG-NLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLT 337

Query: 134 ISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNPLV 188
           +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N L 
Sbjct: 338 LARNCFQL-----YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLT 392

Query: 189 SPPMD 193
           S P+D
Sbjct: 393 SLPLD 397



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N+L  LP++IG LS L  L +  N L ++P+++  C +LEELN   N +  L
Sbjct: 263 ITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTL 322

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+++   L+ L +L++  NC                                        
Sbjct: 323 PESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLS 382

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N L  +PED+  L++LEVL +S N   L+ L
Sbjct: 383 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKL 440

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ +G L  L ELD+  NK+ +LP+ I  L+ LQKL L  N L + P  +
Sbjct: 441 PHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 92/169 (54%), Gaps = 8/169 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 357 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  L +L  LR LD   N L+SLP ++  L +L
Sbjct: 415 TKIPEDVSG-LVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQ 178
           + L ++ N   L TLP  IG L +L  L +  N +T LP+ IG L  +Q
Sbjct: 474 QKLVLTNN--QLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGRLLWMQ 520



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 97/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +PESL + L+ +  L +  N  +  P       S +  L++  N +  +P  I    + L
Sbjct: 322 LPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL 381

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP   G    ++  L++  N++  +P+ ++ L SL VL    N LK L
Sbjct: 382 SKLNMKDNQLTSLPLDFGT-WTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  L NL  L  L++ +N   LE+LP  I  L  L +L ++ N++TTLP  IG L  L  
Sbjct: 441 PHGLGNLRKLRELDLEEN--KLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTH 498

Query: 180 LSLEGNPLVSPPMDV 194
           L L  N L   P ++
Sbjct: 499 LGLGENLLTHLPEEI 513



 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 3/157 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP  + +R   +  L++  NQL  LP   G  + +  L+++ N L  +P+ +    SLE 
Sbjct: 370 IPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEV 429

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L++LP  +G  L  L+ L +  NK+  LP  + +L  L+ L    N L +LP 
Sbjct: 430 LILSNNLLKKLPHGLG-NLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPR 488

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
            + +L NL  L + +N   L  LP  IG L+ + + D
Sbjct: 489 GIGHLTNLTHLGLGENL--LTHLPEEIGRLLWMQDND 523



 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L ++   I ILP S+  LT L  L    N L+SLP ++  L+NL  L +S+N   L +LP
Sbjct: 105 LDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLP 162

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            S+  L  L  LD+ +NK+  +P  +  L  L  L L  N + +   DV
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITAVEKDV 211


>gi|82240198|sp|Q7SXW3.1|LRC40_DANRE RecName: Full=Leucine-rich repeat-containing protein 40
 gi|32766407|gb|AAH55223.1| Leucine rich repeat containing 40 [Danio rerio]
          Length = 601

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/210 (37%), Positives = 113/210 (53%), Gaps = 29/210 (13%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPESL A L N+V LD+  N+LK LP +I  +  L++LD S N +ES+P  +    SLE+
Sbjct: 187 IPESL-ANLQNLVKLDLSCNKLKSLPPAISQMKNLRMLDCSRNQMESIPPVLAQMESLEQ 245

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVIL-PQSLTHLTSLRVLDARLNCLKSLP 120
           L    NKLR LP+    +   LK L    N+I +L  + L HL +L +L+ R N +KSLP
Sbjct: 246 LYLRHNKLRYLPELPCCK--TLKELHCGNNQIEVLEAEHLKHLNALSLLELRDNKVKSLP 303

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E+                         I LL  L  LD++ N I++LP  +G L KL+ L
Sbjct: 304 EE-------------------------ITLLQGLERLDLTNNDISSLPCGLGTLPKLKSL 338

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEKM 210
           SLEGNPL +   D++ +G   +  YL  ++
Sbjct: 339 SLEGNPLRAIRRDLLTKGTGELLKYLRSRV 368



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/173 (36%), Positives = 104/173 (60%), Gaps = 4/173 (2%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +VVLD+H NQL  LP+SIG L +L+ L +S N L  LP  +    +L  L+   N + Q+
Sbjct: 105 LVVLDIHDNQLSSLPDSIGDLEQLQKLILSHNKLTELPSGVWRLTNLRCLHLQQNLIEQI 164

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P  +G +L+NL  L ++ N ++ +P+SL +L +L  LD   N LKSLP  +  + NL +L
Sbjct: 165 PRDLG-QLVNLDELDLSNNHLIDIPESLANLQNLVKLDLSCNKLKSLPPAISQMKNLRML 223

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           + S+N   +E++P  +  + SL +L + +NK+  LP+ + C + L++L    N
Sbjct: 224 DCSRN--QMESIPPVLAQMESLEQLYLRHNKLRYLPE-LPCCKTLKELHCGNN 273



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 96/168 (57%), Gaps = 3/168 (1%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN+L+ +P+ +  L  L VLD+  N L SLP +I +   L++L  + NKL +LP  + + 
Sbjct: 89  SNKLQSIPDDVKLLPALVVLDIHDNQLSSLPDSIGDLEQLQKLILSHNKLTELPSGV-WR 147

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+ L +  N I  +P+ L  L +L  LD   N L  +PE L NL NL  L++S N  
Sbjct: 148 LTNLRCLHLQQNLIEQIPRDLGQLVNLDELDLSNNHLIDIPESLANLQNLVKLDLSCN-- 205

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L++LP +I  + +L  LD S N++ ++P  +  +  L++L L  N L
Sbjct: 206 KLKSLPPAISQMKNLRMLDCSRNQMESIPPVLAQMESLEQLYLRHNKL 253



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 101/169 (59%), Gaps = 8/169 (4%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           + L  L +S N L+S+P  ++   +L  L+ + N+L  LPD+IG +L  L+ L ++ NK+
Sbjct: 80  TDLTKLLLSSNKLQSIPDDVKLLPALVVLDIHDNQLSSLPDSIG-DLEQLQKLILSHNKL 138

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
             LP  +  LT+LR L  + N ++ +P DL  L+NL+ L++S N  +L  +P S+  L +
Sbjct: 139 TELPSGVWRLTNLRCLHLQQNLIEQIPRDLGQLVNLDELDLSNN--HLIDIPESLANLQN 196

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP-----MDVVEQ 197
           LV+LD+S NK+ +LP +I  ++ L+ L    N + S P     M+ +EQ
Sbjct: 197 LVKLDLSCNKLKSLPPAISQMKNLRMLDCSRNQMESIPPVLAQMESLEQ 245



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 25/207 (12%)

Query: 29  SIGCLSKLKVLDVSGNLLESLPKTIENCRSLEEL-NANF--NKLRQLPDTIGFELINLKT 85
           ++  +  LK LD S     ++P  + +      + N NF  N+L  +P  I     +L  
Sbjct: 393 NVHAIKTLKTLDYSEKQDATIPDDVFDAVDGNPVANVNFSKNQLTAVPHRIVDLKDSLAD 452

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN-FQYLETL 144
           +++  NK+  +P    HL  L  +D R N L SLP +LE LI L  + +S N F+    +
Sbjct: 453 INLGFNKLTTIPADFCHLKQLMHIDLRNNLLISLPMELEGLIKLRSVILSFNRFKSFPEV 512

Query: 145 PYSIGLLMSLV---------------------ELDVSYNKITTLPDSIGCLRKLQKLSLE 183
            Y I  L +++                      LD+S N I  +P  +G    L+ L L+
Sbjct: 513 LYRIPSLETILISSNQVGGIDAVQMKTLSRLSTLDLSNNDIMQVPPELGNCTSLRALMLD 572

Query: 184 GNPLVSPPMDVVEQGLSAVKGYLSEKM 210
           GNP  +P   ++ +G  AV  YL  ++
Sbjct: 573 GNPFRNPRAAILIKGTDAVLEYLRSRI 599



 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 25/137 (18%)

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE---DLEN--------- 125
           +E  +L  L ++ NK+  +P  +  L +L VLD   N L SLP+   DLE          
Sbjct: 77  WEQTDLTKLLLSSNKLQSIPDDVKLLPALVVLDIHDNQLSSLPDSIGDLEQLQKLILSHN 136

Query: 126 -----------LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCL 174
                      L NL  L++ QN   +E +P  +G L++L ELD+S N +  +P+S+  L
Sbjct: 137 KLTELPSGVWRLTNLRCLHLQQNL--IEQIPRDLGQLVNLDELDLSNNHLIDIPESLANL 194

Query: 175 RKLQKLSLEGNPLVSPP 191
           + L KL L  N L S P
Sbjct: 195 QNLVKLDLSCNKLKSLP 211



 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 23/112 (20%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTI---- 76
           N+L  +P     L +L  +D+  NLL SLP  +E    L  +  +FN+ +  P+ +    
Sbjct: 458 NKLTTIPADFCHLKQLMHIDLRNNLLISLPMELEGLIKLRSVILSFNRFKSFPEVLYRIP 517

Query: 77  -------------GFELINLKTLS------INCNKIVILPQSLTHLTSLRVL 109
                        G + + +KTLS      ++ N I+ +P  L + TSLR L
Sbjct: 518 SLETILISSNQVGGIDAVQMKTLSRLSTLDLSNNDIMQVPPELGNCTSLRAL 569


>gi|426384526|ref|XP_004058813.1| PREDICTED: protein LAP2 isoform 2 [Gorilla gorilla gorilla]
          Length = 1419

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 110/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+S 
Sbjct: 235 LDVSKNNI-----EMVEEGIST 251



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  L+  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I    S+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+T + + N +  LP  +    ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++ + L N+  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    +L 
Sbjct: 267 QLPETIGS-LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-SWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|41282208|ref|NP_956156.2| leucine-rich repeat-containing protein 40 [Danio rerio]
 gi|37595350|gb|AAQ94561.1| hypothetical protein FLJ20331 [Danio rerio]
          Length = 601

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/210 (37%), Positives = 113/210 (53%), Gaps = 29/210 (13%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPESL A L N+V LD+  N+LK LP +I  +  L++LD S N +ES+P  +    SLE+
Sbjct: 187 IPESL-ANLQNLVKLDLSCNKLKSLPPAISQMKNLRMLDCSRNQMESIPPVLAQMESLEQ 245

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVIL-PQSLTHLTSLRVLDARLNCLKSLP 120
           L    NKLR LP+    +   LK L    N+I +L  + L HL +L +L+ R N +KSLP
Sbjct: 246 LYLRHNKLRYLPELPCCK--TLKELHCGNNQIEVLEAEHLKHLNALSLLELRDNKVKSLP 303

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E+                         I LL  L  LD++ N I++LP  +G L KL+ L
Sbjct: 304 EE-------------------------ITLLQGLERLDLTNNDISSLPCGLGTLPKLKSL 338

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEKM 210
           SLEGNPL +   D++ +G   +  YL  ++
Sbjct: 339 SLEGNPLRAIRRDLLTKGTGELLKYLRSRV 368



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/173 (36%), Positives = 104/173 (60%), Gaps = 4/173 (2%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +VVLD+H NQL  LP+SIG L +L+ L +S N L  LP  +    +L  L+   N + Q+
Sbjct: 105 LVVLDIHDNQLSSLPDSIGDLEQLQKLILSHNKLTELPSGVWRLTNLRCLHLQQNLIEQI 164

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P  +G +L+NL  L ++ N ++ +P+SL +L +L  LD   N LKSLP  +  + NL +L
Sbjct: 165 PRDLG-QLVNLDDLDLSNNHLIDIPESLANLQNLVKLDLSCNKLKSLPPAISQMKNLRML 223

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           + S+N   +E++P  +  + SL +L + +NK+  LP+ + C + L++L    N
Sbjct: 224 DCSRN--QMESIPPVLAQMESLEQLYLRHNKLRYLPE-LPCCKTLKELHCGNN 273



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 96/168 (57%), Gaps = 3/168 (1%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN+L+ +P+ +  L  L VLD+  N L SLP +I +   L++L  + NKL +LP  + + 
Sbjct: 89  SNKLQSIPDDVKLLPALVVLDIHDNQLSSLPDSIGDLEQLQKLILSHNKLTELPSGV-WR 147

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+ L +  N I  +P+ L  L +L  LD   N L  +PE L NL NL  L++S N  
Sbjct: 148 LTNLRCLHLQQNLIEQIPRDLGQLVNLDDLDLSNNHLIDIPESLANLQNLVKLDLSCN-- 205

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L++LP +I  + +L  LD S N++ ++P  +  +  L++L L  N L
Sbjct: 206 KLKSLPPAISQMKNLRMLDCSRNQMESIPPVLAQMESLEQLYLRHNKL 253



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 101/169 (59%), Gaps = 8/169 (4%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           + L  L +S N L+S+P  ++   +L  L+ + N+L  LPD+IG +L  L+ L ++ NK+
Sbjct: 80  TDLTKLLLSSNKLQSIPDDVKLLPALVVLDIHDNQLSSLPDSIG-DLEQLQKLILSHNKL 138

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
             LP  +  LT+LR L  + N ++ +P DL  L+NL+ L++S N  +L  +P S+  L +
Sbjct: 139 TELPSGVWRLTNLRCLHLQQNLIEQIPRDLGQLVNLDDLDLSNN--HLIDIPESLANLQN 196

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP-----MDVVEQ 197
           LV+LD+S NK+ +LP +I  ++ L+ L    N + S P     M+ +EQ
Sbjct: 197 LVKLDLSCNKLKSLPPAISQMKNLRMLDCSRNQMESIPPVLAQMESLEQ 245



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 90/207 (43%), Gaps = 25/207 (12%)

Query: 29  SIGCLSKLKVLDVSGNLLESLPKTIENCRSLEEL-NANF--NKLRQLPDTIGFELINLKT 85
           +I  +  LK LD S     S+P  + +      + N NF  N+L  +P  I      L  
Sbjct: 393 NIHAIKTLKTLDYSEKQDASIPDDVLDAVDGNPVANVNFSKNQLTAVPHRIVDLKDTLAD 452

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN-FQYLETL 144
           +++  NK+  +P    HL  L  +D R N L SLP +LE LI L  + +S N F+    +
Sbjct: 453 INLGFNKLTTIPADFCHLKQLMHIDLRNNLLISLPMELEGLIKLRSVILSFNRFKSFPEV 512

Query: 145 PYSI---------------------GLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLE 183
            Y I                       L  L  LD+S N I  +P  +G    L+ L L+
Sbjct: 513 LYRIPSLETILISSNQVGGIDAVQMKTLSRLSTLDLSNNDIMQVPPELGNCTSLRALMLD 572

Query: 184 GNPLVSPPMDVVEQGLSAVKGYLSEKM 210
           GNP  +P   ++ +G  AV  YL  ++
Sbjct: 573 GNPFRNPRAAILIKGTDAVLEYLRSRI 599



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 25/137 (18%)

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE---DLEN--------- 125
           +E  +L  L ++ NK+  +P  +  L +L VLD   N L SLP+   DLE          
Sbjct: 77  WEQTDLTKLLLSSNKLQSIPDDVKLLPALVVLDIHDNQLSSLPDSIGDLEQLQKLILSHN 136

Query: 126 -----------LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCL 174
                      L NL  L++ QN   +E +P  +G L++L +LD+S N +  +P+S+  L
Sbjct: 137 KLTELPSGVWRLTNLRCLHLQQNL--IEQIPRDLGQLVNLDDLDLSNNHLIDIPESLANL 194

Query: 175 RKLQKLSLEGNPLVSPP 191
           + L KL L  N L S P
Sbjct: 195 QNLVKLDLSCNKLKSLP 211



 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 23/112 (20%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTI---- 76
           N+L  +P     L +L  +D+  NLL SLP  +E    L  +  +FN+ +  P+ +    
Sbjct: 458 NKLTTIPADFCHLKQLMHIDLRNNLLISLPMELEGLIKLRSVILSFNRFKSFPEVLYRIP 517

Query: 77  -------------GFELINLKTLS------INCNKIVILPQSLTHLTSLRVL 109
                        G + + +KTLS      ++ N I+ +P  L + TSLR L
Sbjct: 518 SLETILISSNQVGGIDAVQMKTLSRLSTLDLSNNDIMQVPPELGNCTSLRAL 569


>gi|358679318|ref|NP_001240628.1| protein LAP2 isoform 8 [Homo sapiens]
          Length = 1419

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 110/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+S 
Sbjct: 235 LDVSKNNI-----EMVEEGIST 251



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  L+  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I    S+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+T + + N +  LP  +    ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++ + L N+  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    +L 
Sbjct: 267 QLPETIGS-LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-SWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|418668203|ref|ZP_13229606.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756060|gb|EKR17687.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 378

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 110/194 (56%), Gaps = 4/194 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +  +L N+ +L +HSN+L  L   I  L  LK LD+S N L +LP  IE  ++L+
Sbjct: 130 ILPQEI-EQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLK 188

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L  + N+    P  IG +L NLK L +N N+I ILP  +  L  L+ L    N L +LP
Sbjct: 189 SLYLSENQFATFPKEIG-QLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLP 247

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++E L NL+ L++S N   L  LP  +G L +L  LD+  N++ TLP  I  L+ LQ L
Sbjct: 248 KEIEQLKNLQTLDLSYN--QLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTL 305

Query: 181 SLEGNPLVSPPMDV 194
            L  N L   P ++
Sbjct: 306 FLSNNQLTILPQEI 319



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/197 (37%), Positives = 110/197 (55%), Gaps = 3/197 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L +  NQ    P  IG L  LKVL ++ N +  LP  I   + L+ L  + N+
Sbjct: 183 QLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQ 242

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  I  +L NL+TL ++ N++ ILP+ +  L +L+ LD R N LK+LP+++E L N
Sbjct: 243 LITLPKEIE-QLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKN 301

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S N   L  LP  IG L +L+ L + YN++TTLP+ I  L+ LQ L L  N   
Sbjct: 302 LQTLFLSNN--QLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFS 359

Query: 189 SPPMDVVEQGLSAVKGY 205
           S     + + L   + Y
Sbjct: 360 SQEKKRIRKLLPKCQIY 376



 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 107/186 (57%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ VLD+ SNQL  LP  I  L  L++L +  N L +L K IE  ++L+ L+ + N+
Sbjct: 114 QLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQ 173

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP+ I  +L NLK+L ++ N+    P+ +  L +L+VL    N +  LP ++  L  
Sbjct: 174 LTTLPNEIE-QLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKK 232

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S N   L TLP  I  L +L  LD+SYN++T LP  +G L  LQ L L  N L 
Sbjct: 233 LQYLYLSDN--QLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLK 290

Query: 189 SPPMDV 194
           + P ++
Sbjct: 291 TLPKEI 296



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 107/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +H NQL  LP  I  L  L++L +  N L +LP  IE  ++L+ L+   N
Sbjct: 67  GQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSN 126

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L ++ N++  L + +  L +L+ LD   N L +LP ++E L 
Sbjct: 127 QLTILPQEIE-QLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLK 185

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +S+N     T P  IG L +L  L ++ N+IT LP+ I  L+KLQ L L  N L
Sbjct: 186 NLKSLYLSEN--QFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQL 243

Query: 188 VSPPMDV 194
           ++ P ++
Sbjct: 244 ITLPKEI 250



 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 104/186 (55%), Gaps = 3/186 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V VLD+   +LK LP  IG L  L+ L +  N L  LP+ IE  ++L+ L    N+L 
Sbjct: 47  LEVRVLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLT 106

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ I  +L NL+ L +  N++ ILPQ +  L +L++L    N L +L +D+E L NL+
Sbjct: 107 TLPNEIE-QLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLK 165

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++S N   L TLP  I  L +L  L +S N+  T P  IG L+ L+ L L  N +   
Sbjct: 166 SLDLSNN--QLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 223

Query: 191 PMDVVE 196
           P ++ +
Sbjct: 224 PNEIAK 229



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 91/161 (56%), Gaps = 4/161 (2%)

Query: 48  SLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
            L K ++N   +  L+ +  +L+ LP  IG +L NL+ L ++ N++ +LPQ +  L +L+
Sbjct: 38  DLTKALQNPLEVRVLDLSRQELKTLPIEIG-QLKNLQRLYLHYNQLTVLPQEIEQLKNLQ 96

Query: 108 VLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
           +L  R N L +LP ++E L NL+VL++  N   L  LP  I  L +L  L +  N++TTL
Sbjct: 97  LLYLRSNRLTTLPNEIEQLKNLQVLDLGSN--QLTILPQEIEQLKNLQLLYLHSNRLTTL 154

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSE 208
              I  L+ L+ L L  N L + P + +EQ  +    YLSE
Sbjct: 155 SKDIEQLQNLKSLDLSNNQLTTLPNE-IEQLKNLKSLYLSE 194


>gi|395735874|ref|XP_003776657.1| PREDICTED: protein LAP2 isoform 3 [Pongo abelii]
          Length = 1302

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 105/187 (56%), Gaps = 10/187 (5%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L  + A+ N + +LPD 
Sbjct: 74  LSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPD- 132

Query: 76  IGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            GF +L+NL  L +N   +  LP +   LT L++L+ R N LK LP+ +  L  LE L++
Sbjct: 133 -GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDL 191

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N ++ E +P  +  L  L E  +  N++T +P  IG L++L  L +  N +     ++
Sbjct: 192 GSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EM 244

Query: 195 VEQGLSA 201
           VE+G+S 
Sbjct: 245 VEEGIST 251



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  L+  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTA 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I    S+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+T + + N +  LP  +    ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++   L N+  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    +L 
Sbjct: 267 QLPETI-GSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-SWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|31543701|ref|NP_062632.2| leucine-rich repeat protein SHOC-2 [Mus musculus]
 gi|270341361|ref|NP_001161977.1| leucine-rich repeat protein SHOC-2 [Mus musculus]
 gi|51338746|sp|O88520.2|SHOC2_MOUSE RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|26346735|dbj|BAC37016.1| unnamed protein product [Mus musculus]
 gi|29437101|gb|AAH49775.1| Soc-2 (suppressor of clear) homolog (C. elegans) [Mus musculus]
 gi|52789459|gb|AAH83060.1| Shoc2 protein [Mus musculus]
 gi|74138728|dbj|BAE27179.1| unnamed protein product [Mus musculus]
 gi|94962414|gb|ABF48505.1| Shoc2 [Mus musculus]
 gi|148669769|gb|EDL01716.1| soc-2 (suppressor of clear) homolog (C. elegans), isoform CRA_b
           [Mus musculus]
          Length = 582

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 110/196 (56%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+   L  +  L ++SN+L+ LP  +GCL  L  L +S N L SLP +++N + L 
Sbjct: 114 ILPPSV-KELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLR 172

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKLR++P  + + L +L TL +  N+I  + + + +L  L +L  R N +K LP
Sbjct: 173 MLDLRHNKLREIPSVV-YRLDSLTTLYLRFNRITTVEKDIKNLPKLSMLSIRENKIKQLP 231

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG    +  LD+ +N +  LPD+IG L  L +L
Sbjct: 232 AEIGELCNLITLDVAHN--QLEHLPKEIGNCTQITNLDLQHNDLLDLPDTIGNLSSLNRL 289

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N L + P  + +
Sbjct: 290 GLRYNRLSAIPRSLAK 305



 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 101/185 (54%), Gaps = 12/185 (6%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  +  L+   N L  LPD
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPD 278

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEVLN 133
           TIG  L +L  L +  N++  +P+SL   ++L  L+   N + +LPE  L +L+ L  L 
Sbjct: 279 TIG-NLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLT 337

Query: 134 ISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNPLV 188
           +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N L 
Sbjct: 338 LARNCFQL-----YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLT 392

Query: 189 SPPMD 193
           S P+D
Sbjct: 393 SLPLD 397



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 2/160 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           ++V L++ +NQL  +P  +  L  L+VL +S NLL+ LP  + N R L EL+   NKL  
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ I + L +L+ L +  N++  LP+ + HLT+L  L    N L  LPE++  L NLE 
Sbjct: 463 LPNEIAY-LKDLQKLVLTNNQLSTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEE 521

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           L ++ N   L +LP+ + L   L  + +    ++ LP  I
Sbjct: 522 LYLNDN-PNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 560



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 8/177 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 357 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  L +L  LR LD   N L+SLP ++  L +L
Sbjct: 415 TKIPEDVSG-LVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           + L ++ N   L TLP  IG L +L  L +  N +T LP+ IG L  L++L L  NP
Sbjct: 474 QKLVLTNN--QLSTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNP 528



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 108/230 (46%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N L  LP++IG LS L  L +  N L ++P+++  C +LEELN   N +  L
Sbjct: 263 ITNLDLQHNDLLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTL 322

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+++   L+ L +L++  NC                                        
Sbjct: 323 PESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLS 382

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N L  +PED+  L++LEVL +S N   L+ L
Sbjct: 383 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKL 440

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ +G L  L ELD+  NK+ +LP+ I  L+ LQKL L  N L + P  +
Sbjct: 441 PHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLSTLPRGI 490



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 97/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +PESL + L+ +  L +  N  +  P       S +  L++  N +  +P  I    + L
Sbjct: 322 LPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL 381

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP   G    ++  L++  N++  +P+ ++ L SL VL    N LK L
Sbjct: 382 SKLNMKDNQLTSLPLDFG-TWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  L NL  L  L++ +N   LE+LP  I  L  L +L ++ N+++TLP  IG L  L  
Sbjct: 441 PHGLGNLRKLRELDLEEN--KLESLPNEIAYLKDLQKLVLTNNQLSTLPRGIGHLTNLTH 498

Query: 180 LSLEGNPLVSPPMDV 194
           L L  N L   P ++
Sbjct: 499 LGLGENLLTHLPEEI 513



 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L ++   I ILP S+  LT L  L    N L+SLP ++  L+NL  L +S+N   L +LP
Sbjct: 105 LDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLP 162

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            S+  L  L  LD+ +NK+  +P  +  L  L  L L  N + +   D+
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 211


>gi|456825387|gb|EMF73783.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 428

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 111/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD++ N+L  LP  IG L  L+ L +S N L +LP+      +L+ELN + N
Sbjct: 114 GKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDN 173

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+TL++  N++  L + +  L +L+ L+   N L +LP ++  L 
Sbjct: 174 QLTTLPQEIG-QLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQ 232

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  LN+S N   L TL   IG L +L  L++S N++TTLP  IG L+ L  L+L GN L
Sbjct: 233 NLHTLNLSGN--QLTTLSIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQL 290

Query: 188 VSPPMDV 194
            +  +++
Sbjct: 291 TTLSIEI 297



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 110/186 (59%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L++  NQL  LP  IG L  L  L++SGN L +L   I   ++L  LN + N+
Sbjct: 207 QLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQ 266

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG +L NL TL+++ N++  L   +  L +L+ L+   N L +L +++E L N
Sbjct: 267 LTTLPIEIG-KLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKN 325

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L++S  +  L  LP  IG L +L EL++  N++T LP  IG L+ LQ LSL  N L+
Sbjct: 326 LQTLSLS--YNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLM 383

Query: 189 SPPMDV 194
           + P ++
Sbjct: 384 TFPKEI 389



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 105/184 (57%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           LNV VLD+       LP  I  L  L+ L +  N L++LPK I   ++L+ELN + N+L 
Sbjct: 48  LNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLT 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG +L NL+ L +  N++ ILP  +  L +L+ L    N L +LP +   L NL+
Sbjct: 108 ILPKEIG-KLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+S N   L TLP  IG L +L  L++  N++TTL   I  L+ LQ L+L  N L + 
Sbjct: 167 ELNLSDN--QLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTL 224

Query: 191 PMDV 194
           P+++
Sbjct: 225 PIEI 228



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 113/208 (54%), Gaps = 24/208 (11%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L +  N+LK LP  IG L  L+ L++S N L  LPK I    +L+ L+   N+
Sbjct: 69  QLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNR 128

Query: 69  LRQLPDTIG----------------------FELINLKTLSINCNKIVILPQSLTHLTSL 106
           L  LP  IG                       +L NL+ L+++ N++  LPQ +  L +L
Sbjct: 129 LTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNL 188

Query: 107 RVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITT 166
           + L+ + N L +L +++E L NL+ LN+S N   L TLP  IG L +L  L++S N++TT
Sbjct: 189 QTLNLKSNQLTTLFKEIEQLKNLQTLNLSDN--QLTTLPIEIGKLQNLHTLNLSGNQLTT 246

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L   IG L+ L  L+L  N L + P+++
Sbjct: 247 LSIEIGKLQNLHTLNLSDNQLTTLPIEI 274



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  NQL  L   IG L  L  L++S N L +LP  I   ++L  LN + N
Sbjct: 229 GKLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGN 288

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  L   IG +L NL+ L+++ N++  L + +  L +L+ L    N L  LP+++  L 
Sbjct: 289 QLTTLSIEIG-KLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQ 347

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEG-NP 186
           NL+ LN+  N   L  LP  IG L +L  L +  N++ T P  IG L+ LQ L L G N 
Sbjct: 348 NLQELNLWNN--QLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHNQ 405

Query: 187 LVSPPMDVVEQGLSAVKGYLSE 208
             S   + + + L   K Y  +
Sbjct: 406 FSSEEKERIRKLLPNCKIYFGD 427



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 60/99 (60%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +  ++RVLD       +LP+++E L NL+ L +  N   L+TLP  IG L +L 
Sbjct: 40  LTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDN--RLKTLPKEIGQLKNLQ 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           EL++S N++T LP  IG L  LQ+L L  N L   P+++
Sbjct: 98  ELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEI 136


>gi|397514429|ref|XP_003827490.1| PREDICTED: protein LAP2 isoform 3 [Pan paniscus]
 gi|410039319|ref|XP_003950596.1| PREDICTED: protein LAP2 [Pan troglodytes]
          Length = 1419

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 110/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+S 
Sbjct: 235 LDVSKNNI-----EMVEEGIST 251



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  L+  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I    S+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+T + + N +  LP  +    ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++ + L N+  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    +L 
Sbjct: 267 QLPETIGS-LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-SWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|403268883|ref|XP_003926491.1| PREDICTED: leucine-rich repeat-containing protein 1 [Saimiri
           boliviensis boliviensis]
          Length = 547

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 111/193 (57%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+S    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 143 LPKSF-PELENLTCLSVNDVSLQSLPENIGNLYNLTSLELRENLLTYLPDSLTQLRRLEE 201

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L+ LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 202 LDLGNNEIHSLPESIGA-LLCLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPE 260

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L  L ISQN   LET+P  IG L  L  L V  N++T LP+++G    L +L 
Sbjct: 261 EISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELV 318

Query: 182 LEGNPLVSPPMDV 194
           L  N L++ P  +
Sbjct: 319 LTENQLLTLPKSI 331



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/210 (36%), Positives = 104/210 (49%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LPK+     +L  L+ N  
Sbjct: 102 ANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLMRLPKSFPELENLTCLSVNDV 161

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD-------------ARLN 114
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD               L 
Sbjct: 162 SLQSLPENIG-NLYNLTSLELRENLLTYLPDSLTQLRRLEELDLGNNEIHSLPESIGALL 220

Query: 115 CLKS----------LPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
           CLK           LP+++ NL NL  L++S+N   LE LP  I  L SL +L +S N +
Sbjct: 221 CLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN--RLERLPEEISGLTSLTDLVISQNLL 278

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            T+PD IG L+KL  L ++ N L   P  V
Sbjct: 279 ETIPDGIGKLKKLSILKVDQNRLTQLPEAV 308



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 103/193 (53%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+SLT +L  +  LD+ +N++  LP SIG L  LK L + GN L  LP+ I N ++L  
Sbjct: 189 LPDSLT-QLRRLEELDLGNNEIHSLPESIGALLCLKDLWLDGNQLSELPQEIGNLKNLLC 247

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L +LP+ I   L +L  L I+ N +  +P  +  L  L +L    N L  LPE
Sbjct: 248 LDVSENRLERLPEEISG-LTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPE 306

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + +  +L  L +++N   L TLP SIG L  L  L+   NK+ +LP  IG    L    
Sbjct: 307 AVGDCESLTELVLTEN--QLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFC 364

Query: 182 LEGNPLVSPPMDV 194
           L  N L   P +V
Sbjct: 365 LRDNRLTRIPAEV 377



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 104/186 (55%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L+ +  L +  N+++ LP  I    +L  LDVS N +  +P++I  C++L+  + + N 
Sbjct: 80  QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNP 139

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L +LP +   EL NL  LS+N   +  LP+++ +L +L  L+ R N L  LP+ L  L  
Sbjct: 140 LMRLPKSFP-ELENLTCLSVNDVSLQSLPENIGNLYNLTSLELRENLLTYLPDSLTQLRR 198

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           LE L++  N   + +LP SIG L+ L +L +  N+++ LP  IG L+ L  L +  N L 
Sbjct: 199 LEELDLGNN--EIHSLPESIGALLCLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLE 256

Query: 189 SPPMDV 194
             P ++
Sbjct: 257 RLPEEI 262



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 96/178 (53%), Gaps = 4/178 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N++ LDV  N+L+ LP  I  L+ L  L +S NLLE++P  I   + L  L  + N
Sbjct: 240 GNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQN 299

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L QLP+ +G +  +L  L +  N+++ LP+S+  L  L  L+A  N L SLP+++    
Sbjct: 300 RLTQLPEAVG-DCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCC 358

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           +L V  +  N   L  +P  +     L  LD++ N++  LP S+  L KL+ L L  N
Sbjct: 359 SLTVFCLRDN--RLTRIPAEVSQATELHVLDLAGNRLLHLPLSLTAL-KLKALWLSDN 413



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 31/143 (21%)

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE---------------- 121
           F+L+ L+ L ++ N+I  LP  + +   L  LD   N +  +PE                
Sbjct: 79  FQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGN 138

Query: 122 ----------DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
                     +LENL  L V ++S     L++LP +IG L +L  L++  N +T LPDS+
Sbjct: 139 PLMRLPKSFPELENLTCLSVNDVS-----LQSLPENIGNLYNLTSLELRENLLTYLPDSL 193

Query: 172 GCLRKLQKLSLEGNPLVSPPMDV 194
             LR+L++L L  N + S P  +
Sbjct: 194 TQLRRLEELDLGNNEIHSLPESI 216


>gi|260826171|ref|XP_002608039.1| hypothetical protein BRAFLDRAFT_74989 [Branchiostoma floridae]
 gi|229293389|gb|EEN64049.1| hypothetical protein BRAFLDRAFT_74989 [Branchiostoma floridae]
          Length = 975

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 51/263 (19%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKL-----------------------KV 38
           IPE++  RL  +  +D   N L  LP +IG LSKL                       +V
Sbjct: 394 IPEAI-GRLQKLNRMDAGGNMLTSLPQAIGSLSKLTHLYIYDNRLTELPPWICSLCNLEV 452

Query: 39  LDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ 98
           L V  N L +LP  IE  R L  L+ + N+L+++P  I   L+NL+ L    N++  LP 
Sbjct: 453 LVVGNNRLSTLPPDIEKLRKLTNLHIHDNQLKEVPQAI-CSLLNLEVLVTGNNRLSKLPP 511

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN-----------------FQY- 140
            +  L +LR L    N +K LP  + +L N EVL++S N                 + Y 
Sbjct: 512 GVGRLQNLRELFINDNQVKMLPLGVFSLFNFEVLDVSNNKVSTLPPGAKNANLREVYLYN 571

Query: 141 --LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQG 198
              +T P  +  L ++ +LD+ +N I+ LP ++    KL+ L + GNPL  PP DV +QG
Sbjct: 572 NKFDTFPEVLCELPAMEKLDIRFNNISRLPTALHRADKLEDLDVSGNPLTYPPQDVCKQG 631

Query: 199 LSAVKGYLSEKMNNDHKSPKKKS 221
            +A+  +L       H++  +KS
Sbjct: 632 TAAIMAFLK------HETAARKS 648



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 109/226 (48%), Gaps = 29/226 (12%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+VVL+V +N+L   P  +  L KL  L +  N L  +P  + +  +LE L    N +R+
Sbjct: 128 NLVVLNVGNNKLSTFPAGVEKLQKLTKLYLHSNELTEVPSGVYSLSNLEVLCVARNPIRR 187

Query: 72  LPDTIGF-------------------ELINLKTLSI------NCNKIVILPQSLTHLTSL 106
           L D I                     ++++LKTL +        +K  ++P  L  L  L
Sbjct: 188 LSDDITRLTRLKSLIVADCHFDEFPRQVLHLKTLEVLYAGQAGGSKFDMVPDELEDLQHL 247

Query: 107 RVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITT 166
             L    N L++LP  + +L NL V+N+  N    +T P  +  L ++ ELD+  N IT 
Sbjct: 248 WYLSLENNLLRTLPSTMSHLHNLRVVNLWNN--QFDTFPEVLCELPAMKELDIKNNSITR 305

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNN 212
           LP ++    KL+ L++ GNPL  PP  V  QG  A+  +L ++  N
Sbjct: 306 LPIALHRADKLEDLNVFGNPLTYPPRHV--QGTRAIMTFLKQQGEN 349



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/156 (38%), Positives = 84/156 (53%), Gaps = 3/156 (1%)

Query: 39  LDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ 98
           LD+S   L S+P+ + +   LE L+ + NKL  +P+ IG  L  L TLS   N +  LP 
Sbjct: 17  LDLSNQGLTSIPEEVFDITDLEVLDVSNNKLTNIPEAIG-RLQKLDTLSAYSNMLTSLPH 75

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
           ++  L  L++L    N L  LP+ LE+L NLE LN+  N   L  LP  +    +LV L+
Sbjct: 76  AIRSLQELKLLVVYNNDLSMLPDGLESLENLEYLNVKNN--KLTKLPSKVFSCPNLVVLN 133

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           V  NK++T P  +  L+KL KL L  N L   P  V
Sbjct: 134 VGNNKLSTFPAGVEKLQKLTKLYLHSNELTEVPSGV 169



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 95/179 (53%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           +D+ +  L  +P  +  ++ L+VLDVS N L S+P+ I   + L  ++A  N L  LP  
Sbjct: 361 IDLSNQGLTSIPEEVFDITGLEVLDVSNNELTSIPEAIGRLQKLNRMDAGGNMLTSLPQA 420

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L  L  L I  N++  LP  +  L +L VL    N L +LP D+E L  L  L+I 
Sbjct: 421 IG-SLSKLTHLYIYDNRLTELPPWICSLCNLEVLVVGNNRLSTLPPDIEKLRKLTNLHIH 479

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L+ +P +I  L++L  L    N+++ LP  +G L+ L++L +  N +   P+ V
Sbjct: 480 DN--QLKEVPQAICSLLNLEVLVTGNNRLSKLPPGVGRLQNLRELFINDNQVKMLPLGV 536



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 89/172 (51%), Gaps = 3/172 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+ +  L  +P  +  ++ L+VLDVS N L ++P+ I   + L+ L+A  N L  LP  
Sbjct: 17  LDLSNQGLTSIPEEVFDITDLEVLDVSNNKLTNIPEAIGRLQKLDTLSAYSNMLTSLPHA 76

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           I   L  LK L +  N + +LP  L  L +L  L+ + N L  LP  + +  NL VLN+ 
Sbjct: 77  IR-SLQELKLLVVYNNDLSMLPDGLESLENLEYLNVKNNKLTKLPSKVFSCPNLVVLNVG 135

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            N   L T P  +  L  L +L +  N++T +P  +  L  L+ L +  NP+
Sbjct: 136 NN--KLSTFPAGVEKLQKLTKLYLHSNELTEVPSGVYSLSNLEVLCVARNPI 185



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 100/214 (46%), Gaps = 26/214 (12%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE++  RL  +  L  +SN L  LP++I  L +LK+L V  N L  LP  +E+  +LE 
Sbjct: 50  IPEAI-GRLQKLDTLSAYSNMLTSLPHAIRSLQELKLLVVYNNDLSMLPDGLESLENLEY 108

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   NKL +LP  + F   NL  L++  NK+   P  +  L  L  L    N L  +P 
Sbjct: 109 LNVKNNKLTKLPSKV-FSCPNLVVLNVGNNKLSTFPAGVEKLQKLTKLYLHSNELTEVPS 167

Query: 122 DLENLINLEVLNISQN-FQYLETLPYSIGLLMSLVELDVSYN------------------ 162
            + +L NLEVL +++N  + L      +  L SL+  D  ++                  
Sbjct: 168 GVYSLSNLEVLCVARNPIRRLSDDITRLTRLKSLIVADCHFDEFPRQVLHLKTLEVLYAG 227

Query: 163 -----KITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
                K   +PD +  L+ L  LSLE N L + P
Sbjct: 228 QAGGSKFDMVPDELEDLQHLWYLSLENNLLRTLP 261



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 102/194 (52%), Gaps = 8/194 (4%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+P+ L   L ++  L + +N L+ LP+++  L  L+V+++  N  ++ P+ +    +++
Sbjct: 236 MVPDEL-EDLQHLWYLSLENNLLRTLPSTMSHLHNLRVVNLWNNQFDTFPEVLCELPAMK 294

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+   N + +LP  +      L+ L++  N +   P+   H+   R +   +  LK   
Sbjct: 295 ELDIKNNSITRLPIAL-HRADKLEDLNVFGNPLTYPPR---HVQGTRAI---MTFLKQQG 347

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E+L+       L I  + Q L ++P  +  +  L  LDVS N++T++P++IG L+KL ++
Sbjct: 348 ENLQPQTVNGHLKIDLSNQGLTSIPEEVFDITGLEVLDVSNNELTSIPEAIGRLQKLNRM 407

Query: 181 SLEGNPLVSPPMDV 194
              GN L S P  +
Sbjct: 408 DAGGNMLTSLPQAI 421



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 5/72 (6%)

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L+ L++ N     Q L ++P  +  +  L  LDVS NK+T +P++IG L+KL  
Sbjct: 8   PQIVNGLLKLDLSN-----QGLTSIPEEVFDITDLEVLDVSNNKLTNIPEAIGRLQKLDT 62

Query: 180 LSLEGNPLVSPP 191
           LS   N L S P
Sbjct: 63  LSAYSNMLTSLP 74


>gi|421118980|ref|ZP_15579307.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348320|gb|EKO99146.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 377

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/197 (37%), Positives = 110/197 (55%), Gaps = 3/197 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L +  NQ    P  IG L  LKVL ++ N +  LP  I   + L+ L  + N+
Sbjct: 182 QLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQ 241

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  I  +L NLK+L ++ N++ ILP+ +  L +L+ LD R N LK+LP+++E L N
Sbjct: 242 LITLPKEIE-QLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKN 300

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S N   L  LP  IG L +L+ L + YN++TTLP+ I  L+ LQ L L  N   
Sbjct: 301 LQTLFLSNN--QLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFS 358

Query: 189 SPPMDVVEQGLSAVKGY 205
           S     + + L   + Y
Sbjct: 359 SQEKKRIRKLLPKCQIY 375



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 110/194 (56%), Gaps = 4/194 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+ +  +L N+ +L +HSN+L  L   I  L  LK LD+S N L +LP  IE  ++L+
Sbjct: 129 VLPQEI-EQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLK 187

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L  + N+    P  IG +L NLK L +N N+I ILP  +  L  L+ L    N L +LP
Sbjct: 188 SLYLSENQFATFPKEIG-QLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLP 246

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++E L NL+ L++S N   L  LP  +G L +L  LD+  N++ TLP  I  L+ LQ L
Sbjct: 247 KEIEQLKNLKSLDLSYN--QLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTL 304

Query: 181 SLEGNPLVSPPMDV 194
            L  N L   P ++
Sbjct: 305 FLSNNQLTILPQEI 318



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +H NQL  LP  I  L  L++L +  N L +LPK IE  ++L+ L+ + N
Sbjct: 66  GKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLSNN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L ++ N++  L + +  L +L+ LD   N L +LP ++E L 
Sbjct: 126 QLTVLPQEIE-QLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLK 184

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +S+N     T P  IG L +L  L ++ N+IT LP+ I  L+KLQ L L  N L
Sbjct: 185 NLKSLYLSEN--QFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQL 242

Query: 188 VSPPMDV 194
           ++ P ++
Sbjct: 243 ITLPKEI 249



 Score = 97.4 bits (241), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 107/186 (57%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ VLD+ +NQL  LP  I  L  L++L +  N L +L K IE  ++L+ L+ + N+
Sbjct: 113 QLKNLQVLDLSNNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQ 172

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP+ I  +L NLK+L ++ N+    P+ +  L +L+VL    N +  LP ++  L  
Sbjct: 173 LTTLPNEIE-QLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKK 231

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S N   L TLP  I  L +L  LD+SYN++T LP  +G L  LQ L L  N L 
Sbjct: 232 LQYLYLSDN--QLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLK 289

Query: 189 SPPMDV 194
           + P ++
Sbjct: 290 TLPKEI 295



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 104/186 (55%), Gaps = 3/186 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V VLD+   +LK LP  IG L  L+ L +  N L  LP+ IE  ++L+ L    N+L 
Sbjct: 46  LEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLT 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  I  +L NL+ L ++ N++ +LPQ +  L +L++L    N L +L +D+E L NL+
Sbjct: 106 TLPKEIE-QLKNLQVLDLSNNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLK 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++S N   L TLP  I  L +L  L +S N+  T P  IG L+ L+ L L  N +   
Sbjct: 165 SLDLSNN--QLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 191 PMDVVE 196
           P ++ +
Sbjct: 223 PNEIAK 228



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 93/161 (57%), Gaps = 4/161 (2%)

Query: 48  SLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
            L K ++N   +  L+ +  +L+ LP  IG +L NL+ L ++ N++ +LPQ +  L +L+
Sbjct: 37  DLTKALQNPLEVRVLDLSRQELKTLPIEIG-KLKNLQRLYLHYNQLTVLPQEIEQLKNLQ 95

Query: 108 VLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
           +L  R N L +LP+++E L NL+VL++S N   L  LP  I  L +L  L +  N++TTL
Sbjct: 96  LLYLRSNRLTTLPKEIEQLKNLQVLDLSNN--QLTVLPQEIEQLKNLQLLYLHSNRLTTL 153

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSE 208
              I  L+ L+ L L  N L + P + +EQ  +    YLSE
Sbjct: 154 SKDIEQLQNLKSLDLSNNQLTTLPNE-IEQLKNLKSLYLSE 193



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/130 (38%), Positives = 74/130 (56%), Gaps = 1/130 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A+L  +  L +  NQL  LP  I  L  LK LD+S N L  LPK +    +L+ L+   N
Sbjct: 227 AKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNN 286

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  I  +L NL+TL ++ N++ ILPQ +  L +L  L    N L +LP ++E L 
Sbjct: 287 QLKTLPKEIE-QLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK 345

Query: 128 NLEVLNISQN 137
           NL+ L ++ N
Sbjct: 346 NLQTLYLNNN 355


>gi|442619581|ref|NP_001262665.1| Sur-8, isoform E [Drosophila melanogaster]
 gi|440217532|gb|AGB96045.1| Sur-8, isoform E [Drosophila melanogaster]
          Length = 694

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 112/191 (58%), Gaps = 4/191 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP S     +++  L ++SN++  LP  IGCL  L+ L ++ N L SLP++++NC  L+
Sbjct: 174 VIP-STVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSLPESLQNCSQLK 232

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKL ++P  I + L +L TL +  N+I  +   L  L +L +L  R N ++ L 
Sbjct: 233 VLDLRHNKLAEIPPVI-YRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELG 291

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             +  L+NL  L++S N  +LE LP  IG  ++L  LD+ +N++  +PDSIG L+ L +L
Sbjct: 292 SAIGALVNLTTLDVSHN--HLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRL 349

Query: 181 SLEGNPLVSPP 191
            +  N L S P
Sbjct: 350 GMRYNRLSSVP 360



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 115/245 (46%), Gaps = 51/245 (20%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +    +N+  LD+  N+L  +P+SIG L  L  L +  N L S+P T++NC+S++E
Sbjct: 313 LPEDI-GNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPATLKNCKSMDE 371

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ------------SLTH------- 102
            N   N + QLPD +   L  L T++++ N+    P             +L H       
Sbjct: 372 FNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIP 431

Query: 103 ---------LTSLRV--------------------LDARLNCLKSLPEDLENLINLEVLN 133
                    LT L +                    L+   N L+ LP+D+ NL NLE+L 
Sbjct: 432 YGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILI 491

Query: 134 ISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMD 193
           +S N   L+ +P +IG L  L  LD+  N+I  LP  IG L +LQ+L L+ N +   P  
Sbjct: 492 LSNNM--LKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPRS 549

Query: 194 VVEQG 198
           +   G
Sbjct: 550 IGHLG 554



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 97/161 (60%), Gaps = 2/161 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           +N+V L++ +N L+ LP+ I  L  L++L +S N+L+ +P TI N R L  L+   N++ 
Sbjct: 462 VNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIE 521

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG  L  L+ L +  N+I +LP+S+ HL +L  L    N L+ LPE++ +L +LE
Sbjct: 522 VLPHEIGL-LHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLE 580

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
            L I+QN   LE LP+ + L  +L  L++    ++T+P  I
Sbjct: 581 NLYINQN-PGLEKLPFELALCQNLKYLNIDKCPLSTIPPEI 620



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 26/179 (14%)

Query: 36  LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           +K LD+S + +  +P T++ C  L EL    NK+ QLP  IG  L++L+ L++N N +  
Sbjct: 162 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGC-LVSLRNLALNENSLTS 220

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLP-----------------------EDLENLINLEVL 132
           LP+SL + + L+VLD R N L  +P                       +DL  L+NL +L
Sbjct: 221 LPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTML 280

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           ++ +N   +  L  +IG L++L  LDVS+N +  LP+ IG    L  L L+ N L+  P
Sbjct: 281 SLREN--KIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIP 337



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 99/185 (53%), Gaps = 4/185 (2%)

Query: 3   PESLTARLLNVVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEE 61
           P    A+  NV  +++  N++  +P  I   +K L  L++  N+L +LP  I    ++ E
Sbjct: 407 PTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVE 466

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N L++LPD I   L NL+ L ++ N +  +P ++ +L  LR+LD   N ++ LP 
Sbjct: 467 LNLATNALQKLPDDI-MNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPH 525

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L  L+ L +  N   +  LP SIG L +L  L VS N +  LP+ IG L  L+ L 
Sbjct: 526 EIGLLHELQRLILQTN--QITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLY 583

Query: 182 LEGNP 186
           +  NP
Sbjct: 584 INQNP 588



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 103/188 (54%), Gaps = 4/188 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L+N+ +L +  N+++ L ++IG L  L  LDVS N LE LP+ I NC +L  L+   N+
Sbjct: 273 QLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNE 332

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLI 127
           L  +PD+IG  L +L  L +  N++  +P +L +  S+   +   N +  LP+  L +L 
Sbjct: 333 LLDIPDSIG-NLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLS 391

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNP 186
            L  + +S+N Q+            ++  +++ +N+I  +P  I    K L KL+++ N 
Sbjct: 392 GLTTITLSRN-QFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENM 450

Query: 187 LVSPPMDV 194
           L + P+D+
Sbjct: 451 LTALPLDI 458



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +P+ + A L  +  + +  NQ    P       + +  +++  N ++ +P  I    + L
Sbjct: 382 LPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGL 441

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N L  LP  IG   +N+  L++  N +  LP  + +L +L +L    N LK +
Sbjct: 442 TKLNMKENMLTALPLDIG-TWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKI 500

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  + NL  L +L++ +N   +E LP+ IGLL  L  L +  N+IT LP SIG L  L  
Sbjct: 501 PNTIGNLRKLRILDLEEN--RIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTH 558

Query: 180 LSLEGNPLVSPPMDV 194
           LS+  N L   P ++
Sbjct: 559 LSVSENNLQFLPEEI 573



 Score = 41.6 bits (96), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 28/146 (19%)

Query: 51  KTIENCR--SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRV 108
           K ++ CR   ++ L+ + + +  +P T+  E ++L  L +  NKI  LP  +  L SLR 
Sbjct: 152 KALQRCRDEGIKRLDLSKSSITVIPSTVK-ECVHLTELYLYSNKIGQLPPEIGCLVSLRN 210

Query: 109 LDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           L    N L SLPE L+N   L+VL                         D+ +NK+  +P
Sbjct: 211 LALNENSLTSLPESLQNCSQLKVL-------------------------DLRHNKLAEIP 245

Query: 169 DSIGCLRKLQKLSLEGNPLVSPPMDV 194
             I  LR L  L L  N + +   D+
Sbjct: 246 PVIYRLRSLTTLYLRFNRITAVADDL 271


>gi|418701701|ref|ZP_13262623.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759265|gb|EKR25480.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 310

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/180 (40%), Positives = 106/180 (58%), Gaps = 3/180 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + +NQ+  LP  I  L  LKVL +S N L +LPK IE  ++L+ L    N
Sbjct: 114 EQLKNLQTLYLGNNQITILPKEIRQLQNLKVLFLSNNQLTTLPKEIEQLKNLQTLYLGNN 173

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L   P  I  +L NL+ L +  N++ +LPQ +  L +L++LD   N LK+LP+++E L 
Sbjct: 174 RLTTFPKEIE-QLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLK 232

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +  N   L  LP  IG L +L  L ++ N++TTLP  IG L+ LQ+L L  N L
Sbjct: 233 NLQTLYLGYN--QLTVLPKEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQL 290



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/205 (35%), Positives = 107/205 (52%), Gaps = 22/205 (10%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++   +L  LP  IG L  L+ L++  N +  LPK I   ++L+ L   +N+L 
Sbjct: 48  LDVRVLNLSEQKLTTLPKEIGQLKNLQELNLGNNQITILPKEIGQLQNLQLLGLYYNQLT 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  I  +L NL+TL +  N+I ILP+ +  L +L+VL    N L +LP+++E L NL+
Sbjct: 108 ILPKEIE-QLKNLQTLYLGNNQITILPKEIRQLQNLKVLFLSNNQLTTLPKEIEQLKNLQ 166

Query: 131 VLNISQN------------------FQY---LETLPYSIGLLMSLVELDVSYNKITTLPD 169
            L +  N                  + Y   L  LP  I  L +L  LD+SYN++ TLP 
Sbjct: 167 TLYLGNNRLTTFPKEIEQLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLKTLPK 226

Query: 170 SIGCLRKLQKLSLEGNPLVSPPMDV 194
            I  L+ LQ L L  N L   P ++
Sbjct: 227 EIEQLKNLQTLYLGYNQLTVLPKEI 251



 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 3/92 (3%)

Query: 81  INLKTLSINCNKIVILPQSLTHLT-SLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           +N +   I+  KI I    L HL+  ++  +      ++L E L+N +++ VLN+S+  Q
Sbjct: 1   MNFRITLIHLQKITISLLFLIHLSCKIQAEEVESGTYRNLTEALQNPLDVRVLNLSE--Q 58

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
            L TLP  IG L +L EL++  N+IT LP  I
Sbjct: 59  KLTTLPKEIGQLKNLQELNLGNNQITILPKEI 90


>gi|224048615|ref|XP_002195329.1| PREDICTED: leucine-rich repeat-containing protein 1 [Taeniopygia
           guttata]
          Length = 524

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/193 (39%), Positives = 108/193 (55%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP+++   + LEE
Sbjct: 120 LPESF-PELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQRLEE 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+L  LP+TIG  L NLK L ++ N++  +PQ + +L +L  LD   N L+ LPE
Sbjct: 179 LDLGNNELYHLPETIG-ALFNLKDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLECLPE 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L  L +SQN   L+ LP  IG L  L  L V  NK+  L DSIG    L +L 
Sbjct: 238 EISGLTSLTDLLVSQNL--LQVLPDGIGKLRRLSILKVDQNKLIQLTDSIGDCESLTELV 295

Query: 182 LEGNPLVSPPMDV 194
           L  N L S P  +
Sbjct: 296 LTENQLQSLPKSI 308



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 107/195 (54%), Gaps = 7/195 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   +R L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L
Sbjct: 27  VPEEIYRYSRSLEELLLD--ANQLRELPKPFFQLVKLRKLGLSDNEIQRLPPEIANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP+S   L +L  L      L++L
Sbjct: 85  VELDLSRNDIPEIPESISF-CRALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQAL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++ NL NL  L + +N   L  LP S+  L  L ELD+  N++  LP++IG L  L+ 
Sbjct: 144 PENIGNLYNLASLELRENL--LTYLPESLAQLQRLEELDLGNNELYHLPETIGALFNLKD 201

Query: 180 LSLEGNPLVSPPMDV 194
           L L+GN L   P +V
Sbjct: 202 LWLDGNQLAEIPQEV 216



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/250 (33%), Positives = 117/250 (46%), Gaps = 32/250 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LD+  N +  +P SI     L++ D SGN L  LP++    ++L  L+ N  
Sbjct: 79  ANFMQLVELDLSRNDIPEIPESISFCRALQIADFSGNPLTRLPESFPELQNLTCLSVNDI 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE------ 121
            L+ LP+ IG  L NL +L +  N +  LP+SL  L  L  LD   N L  LPE      
Sbjct: 139 SLQALPENIG-NLYNLASLELRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGALF 197

Query: 122 -----------------DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                            ++ NL NL  L++S+N   LE LP  I  L SL +L VS N +
Sbjct: 198 NLKDLWLDGNQLAEIPQEVGNLKNLLCLDVSEN--KLECLPEEISGLTSLTDLLVSQNLL 255

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVG 224
             LPD IG LR+L  L ++ N L+    D +    S  +  L+E  N     PK    +G
Sbjct: 256 QVLPDGIGKLRRLSILKVDQNKLIQ-LTDSIGDCESLTELVLTE--NQLQSLPKS---IG 309

Query: 225 KLVKYGTFNG 234
           KL K    N 
Sbjct: 310 KLKKLNNLNA 319



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/184 (38%), Positives = 101/184 (54%), Gaps = 5/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +   L N++ LDV  N+L+CLP  I  L+ L  L VS NLL+ LP  I   R L  
Sbjct: 212 IPQEV-GNLKNLLCLDVSENKLECLPEEISGLTSLTDLLVSQNLLQVLPDGIGKLRRLSI 270

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + NKL QL D+IG +  +L  L +  N++  LP+S+  L  L  L+A  N L SLP+
Sbjct: 271 LKVDQNKLIQLTDSIG-DCESLTELVLTENQLQSLPKSIGKLKKLNNLNADRNKLTSLPK 329

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++    +L V ++  N   L  +P  I     L  LDV+ N++T LP S+  LR L+ L 
Sbjct: 330 EVGGCCSLNVFSVRDN--RLSRIPSEISQATELHVLDVAGNRLTYLPISLTTLR-LKALW 386

Query: 182 LEGN 185
           L  N
Sbjct: 387 LSDN 390



 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 25/135 (18%)

Query: 57  RSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
           R +E ++     L  +P+ I     +L+ L ++ N++  LP+    L  LR L    N +
Sbjct: 12  RHVESIDKRHCSLAAVPEEIYRYSRSLEELLLDANQLRELPKPFFQLVKLRKLGLSDNEI 71

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + LP ++ N                          M LVELD+S N I  +P+SI   R 
Sbjct: 72  QRLPPEIAN-------------------------FMQLVELDLSRNDIPEIPESISFCRA 106

Query: 177 LQKLSLEGNPLVSPP 191
           LQ     GNPL   P
Sbjct: 107 LQIADFSGNPLTRLP 121


>gi|428181669|gb|EKX50532.1| hypothetical protein GUITHDRAFT_52371, partial [Guillardia theta
           CCMP2712]
          Length = 292

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 125/219 (57%), Gaps = 24/219 (10%)

Query: 3   PESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEEL 62
           PE +  +++N+  L +H+N+++ LPN +G LS L  L +  N L  LP+TI N  SL +L
Sbjct: 1   PEDI-GKMVNLNELWLHNNRIESLPNGLGNLSHLNKLLLDNNNLTMLPQTIGNLTSLAKL 59

Query: 63  NANFNKLRQLPDTIGF--ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +   NK++ LP  +GF   + +L+ L +  N++ ++P+S++ LT+L VL+   N L+  P
Sbjct: 60  SVTNNKMKALPPQLGFLGLMTSLQVLELYSNQLSMIPESISALTNLAVLNLSYNKLQLFP 119

Query: 121 EDLENLINLEVLNISQN-FQYLET--------------------LPYSIGLLMSLVELDV 159
           E +E+L +L  L++S N  Q+L                      +P  IG L +L EL +
Sbjct: 120 EQIESLTSLTELHLSYNQIQFLTPGIGNLTTLNRFRIAGNAIGFMPSEIGQLTNLSELSL 179

Query: 160 SYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQG 198
           + NKI  LP  +G +  L  L ++GN + SPP D+++QG
Sbjct: 180 TDNKIKVLPVELGNINSLAMLLIDGNDIQSPPADIIKQG 218



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 109/204 (53%), Gaps = 23/204 (11%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLP- 73
           VL+++SNQL  +P SI  L+ L VL++S N L+  P+ IE+  SL EL+ ++N+++ L  
Sbjct: 84  VLELYSNQLSMIPESISALTNLAVLNLSYNKLQLFPEQIESLTSLTELHLSYNQIQFLTP 143

Query: 74  ---------------DTIGF------ELINLKTLSINCNKIVILPQSLTHLTSLRVLDAR 112
                          + IGF      +L NL  LS+  NKI +LP  L ++ SL +L   
Sbjct: 144 GIGNLTTLNRFRIAGNAIGFMPSEIGQLTNLSELSLTDNKIKVLPVELGNINSLAMLLID 203

Query: 113 LNCLKSLPEDL-ENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
            N ++S P D+ +    L +  +S N   L  +   IG   +L  L +  N +T LP S+
Sbjct: 204 GNDIQSPPADIIKQGSKLYITGLSLNDNLLAEVDAVIGSFTNLTALHLDRNLLTFLPSSM 263

Query: 172 GCLRKLQKLSLEGNPLVSPPMDVV 195
           G L KL  L+L+GN L  PP +++
Sbjct: 264 GNLTKLVTLTLDGNELKDPPSEIL 287


>gi|114599989|ref|XP_001162676.1| PREDICTED: protein LAP2 isoform 2 [Pan troglodytes]
 gi|397514431|ref|XP_003827491.1| PREDICTED: protein LAP2 isoform 4 [Pan paniscus]
 gi|410217136|gb|JAA05787.1| erbb2 interacting protein [Pan troglodytes]
 gi|410260626|gb|JAA18279.1| erbb2 interacting protein [Pan troglodytes]
 gi|410300754|gb|JAA28977.1| erbb2 interacting protein [Pan troglodytes]
 gi|410354911|gb|JAA44059.1| erbb2 interacting protein [Pan troglodytes]
          Length = 1302

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 105/187 (56%), Gaps = 10/187 (5%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L  + A+ N + +LPD 
Sbjct: 74  LSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPD- 132

Query: 76  IGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            GF +L+NL  L +N   +  LP +   LT L++L+ R N LK LP+ +  L  LE L++
Sbjct: 133 -GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDL 191

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N ++ E +P  +  L  L E  +  N++T +P  IG L++L  L +  N +     ++
Sbjct: 192 GSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EM 244

Query: 195 VEQGLSA 201
           VE+G+S 
Sbjct: 245 VEEGIST 251



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  L+  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I    S+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+T + + N +  LP  +    ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++   L N+  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    +L 
Sbjct: 267 QLPETI-GSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-SWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|418731225|ref|ZP_13289638.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774120|gb|EKR54139.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 297

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 103/178 (57%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQL  LP  IG L KL+VL+++GN   SLPK I   ++LE L+   N
Sbjct: 90  GQLQNLERLDLDGNQLASLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGN 149

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP  IG +L  L+ L+++ N+  I P+ +    SL+ L    + LK LP+++  L 
Sbjct: 150 QFTSLPKEIG-QLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKILPKEILLLQ 208

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ L++  N   L +LP  IG L +L EL++  NK+ TLP  I  L+ LQ L L  N
Sbjct: 209 NLQSLHLDGN--QLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSN 264



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 101/183 (55%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L++  NQL  LP  IG L  L+VL+++GN L SLPK I   ++LE L+ + N+L  
Sbjct: 48  NLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLDGNQLAS 107

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L  L+ L++  N+   LP+ +  L +L  LD   N   SLP+++  L  LE 
Sbjct: 108 LPKEIG-QLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEA 166

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LN+  N       P  I    SL  L +S +++  LP  I  L+ LQ L L+GN L S P
Sbjct: 167 LNLDHN--RFTIFPKEIRQQQSLKWLRLSGDQLKILPKEILLLQNLQSLHLDGNQLTSLP 224

Query: 192 MDV 194
            ++
Sbjct: 225 KEI 227



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 106/193 (54%), Gaps = 11/193 (5%)

Query: 11  LNVVVLDVHSN--------QLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEEL 62
           L+V++L++  N        +L+ LP  IG    L+ L++ GN L SLPK I   ++L  L
Sbjct: 16  LDVLILEMSMNTRISMGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVL 75

Query: 63  NANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED 122
           N   N+L  LP  IG +L NL+ L ++ N++  LP+ +  L  LRVL+   N   SLP++
Sbjct: 76  NLAGNQLTSLPKEIG-QLQNLERLDLDGNQLASLPKEIGQLQKLRVLNLAGNQFTSLPKE 134

Query: 123 LENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           +  L NLE L+++ N     +LP  IG L  L  L++ +N+ T  P  I   + L+ L L
Sbjct: 135 IGQLQNLERLDLAGN--QFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRL 192

Query: 183 EGNPLVSPPMDVV 195
            G+ L   P +++
Sbjct: 193 SGDQLKILPKEIL 205


>gi|71993778|ref|NP_001022864.1| Protein Y42G9A.3, isoform a [Caenorhabditis elegans]
 gi|351063109|emb|CCD71152.1| Protein Y42G9A.3, isoform a [Caenorhabditis elegans]
          Length = 375

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/209 (39%), Positives = 109/209 (52%), Gaps = 8/209 (3%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV VLDV  N L  LP  IG LS L  L    NLLE LPK ++   +LE L  + N+L  
Sbjct: 84  NVSVLDVSFNSLSALPEDIGTLSSLTTLIARNNLLEHLPKGLQLLENLEHLYLSGNRLEY 143

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           +P  I   +  LKTL +  N I   P +++ LT LRVL    N L+ +P  +  L  LE 
Sbjct: 144 VPPVI-LTMRKLKTLHLGGNYIDSCPSNISVLTLLRVLYLGGNRLREIPASIGCLDELEN 202

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP- 190
           L +  N   LET+P ++G L  L  L +  N++ TLP  I  LR+LQ+LSL  NPLV   
Sbjct: 203 LGLCDNI--LETIPSTLGDLHYLETLSLHNNRLRTLPTDILNLRRLQQLSLRNNPLVHSF 260

Query: 191 --PMDVVEQGLSAVKGYLSEKMNNDHKSP 217
              MD+    L  + G    +  N HK P
Sbjct: 261 VHNMDLAPPSLKELSGRTVRQ--NYHKVP 287



 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 1/128 (0%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+  L +  N+L+ +P  I  + KLK L + GN ++S P  I     L  L    N+L
Sbjct: 128 LENLEHLYLSGNRLEYVPPVILTMRKLKTLHLGGNYIDSCPSNISVLTLLRVLYLGGNRL 187

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           R++P +IG  L  L+ L +  N +  +P +L  L  L  L    N L++LP D+ NL  L
Sbjct: 188 REIPASIGC-LDELENLGLCDNILETIPSTLGDLHYLETLSLHNNRLRTLPTDILNLRRL 246

Query: 130 EVLNISQN 137
           + L++  N
Sbjct: 247 QQLSLRNN 254


>gi|327267576|ref|XP_003218575.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Anolis
           carolinensis]
          Length = 582

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 112/196 (57%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+   L  +  L ++ N+L+ LP  +GCL  L  L +S N L SLP +++N + L 
Sbjct: 114 LLPSSV-KELTQLTELYLYGNKLQSLPPEVGCLVNLVTLALSENSLTSLPDSLDNLKQLR 172

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            ++   NKLR++P  + + L +L TL +  N+I  + + + +L+ L +L  R N +K LP
Sbjct: 173 MVDLRHNKLREIPPVV-YRLTSLTTLYLRFNRITAVEKDIKNLSLLTMLSIRENKIKQLP 231

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG    + +LD+ +N++  LPDSIG L  L+ L
Sbjct: 232 AEIGELCNLITLDVAHN--QLEHLPKEIGNCTQITKLDLQHNELLDLPDSIGNLSSLKSL 289

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N L + P  + +
Sbjct: 290 GLRYNRLSAIPRSLAQ 305



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 109/230 (47%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N+L  LP+SIG LS LK L +  N L ++P+++  C  L+ELN   N +  L
Sbjct: 263 ITKLDLQHNELLDLPDSIGNLSSLKSLGLRYNRLSAIPRSLAQCSKLDELNLENNIISAL 322

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+ +   L+NL +L++  NC                                        
Sbjct: 323 PEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYALNMEHNRINKIPFGIFSRAKVLS 382

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N L  +PED+  L++LEVL +S N   L +L
Sbjct: 383 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLNKIPEDVSGLVSLEVLILSNNL--LRSL 440

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ IG L  L ELD+  NK+ +LP+ I  LR LQ+L L  N L + P  +
Sbjct: 441 PHGIGNLRKLRELDLEENKLESLPNEIAYLRDLQRLILTNNQLSTLPRGI 490



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 106/187 (56%), Gaps = 12/187 (6%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           + +L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  + +L+   N+L  L
Sbjct: 217 LTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITKLDLQHNELLDL 276

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEV 131
           PD+IG  L +LK+L +  N++  +P+SL   + L  L+   N + +LPE  L +L+NL  
Sbjct: 277 PDSIG-NLSSLKSLGLRYNRLSAIPRSLAQCSKLDELNLENNIISALPEGLLSSLVNLTS 335

Query: 132 LNISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNP 186
           L +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N 
Sbjct: 336 LTLARNCFQS-----YPVGGPSQFSTIYALNMEHNRINKIPFGIFSRAKVLSKLNMKDNQ 390

Query: 187 LVSPPMD 193
           L S P+D
Sbjct: 391 LTSLPLD 397



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/159 (37%), Positives = 89/159 (55%), Gaps = 2/159 (1%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +V L++ +NQL  +P  +  L  L+VL +S NLL SLP  I N R L EL+   NKL  L
Sbjct: 404 MVELNLATNQLNKIPEDVSGLVSLEVLILSNNLLRSLPHGIGNLRKLRELDLEENKLESL 463

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P+ I + L +L+ L +  N++  LP+ + HL +L  L    N L  LPE++  L NLE L
Sbjct: 464 PNEIAY-LRDLQRLILTNNQLSTLPRGIGHLINLTHLGLGENFLTQLPEEIGTLENLEEL 522

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
            ++ N  +L +LP+ + L   L  + +    + TLP  I
Sbjct: 523 YLNDN-PHLNSLPFELALCSKLSIMSIENCPLNTLPAQI 560



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 111/216 (51%), Gaps = 6/216 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP  + +R   +  L++  NQL  LP   G  + +  L+++ N L  +P+ +    SLE 
Sbjct: 370 IPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLNKIPEDVSGLVSLEV 429

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N LR LP  IG  L  L+ L +  NK+  LP  + +L  L+ L    N L +LP 
Sbjct: 430 LILSNNLLRSLPHGIG-NLRKLRELDLEENKLESLPNEIAYLRDLQRLILTNNQLSTLPR 488

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYN-KITTLPDSIGCLRKLQKL 180
            + +LINL  L + +NF  L  LP  IG L +L EL ++ N  + +LP  +    KL  +
Sbjct: 489 GIGHLINLTHLGLGENF--LTQLPEEIGTLENLEELYLNDNPHLNSLPFELALCSKLSIM 546

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKS 216
           S+E  PL + P  +V  G S +  +L  KM   +++
Sbjct: 547 SIENCPLNTLPAQIVAGGPSFIIQFL--KMQGPYRA 580



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 98/177 (55%), Gaps = 8/177 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 357 IYALNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  + +L  LR LD   N L+SLP ++  L +L
Sbjct: 415 NKIPEDVSG-LVSLEVLILSNNLLRSLPHGIGNLRKLRELDLEENKLESLPNEIAYLRDL 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           + L ++ N   L TLP  IG L++L  L +  N +T LP+ IG L  L++L L  NP
Sbjct: 474 QRLILTNN--QLSTLPRGIGHLINLTHLGLGENFLTQLPEEIGTLENLEELYLNDNP 528


>gi|403267431|ref|XP_003925836.1| PREDICTED: protein LAP2 isoform 2 [Saimiri boliviensis boliviensis]
          Length = 1419

 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGL- 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGELTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 111/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 VVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+SA
Sbjct: 235 LDVSKNNI-----EMVEEGISA 251



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 116/215 (53%), Gaps = 5/215 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD   N ++ + E +    
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACE 253

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +S N   L+ LP +IGLL ++  L +  N++  LPDSIG L  +++L    N +
Sbjct: 254 NLQDLLLSSN--SLQQLPETIGLLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 188 VSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSW 222
            + P  + E  L+ ++ + ++        P+  SW
Sbjct: 312 EALPSSIGE--LTNLRTFAADHNYLQQLPPEIGSW 344



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFNFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/163 (34%), Positives = 94/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+ E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 244 MVEEGISA-CENLQDLLLSSNSLQQLPETIGLLKNITTLKIDENQLMYLPDSIGGLISVE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP +IG EL NL+T + + N +  LP  +    ++ VL    N L++LP
Sbjct: 303 ELDCSFNEVEALPSSIG-ELTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402


>gi|61557121|ref|NP_001013173.1| leucine-rich repeat protein SHOC-2 [Rattus norvegicus]
 gi|81910889|sp|Q6AYI5.1|SHOC2_RAT RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|50925627|gb|AAH79032.1| Soc-2 (suppressor of clear) homolog (C. elegans) [Rattus
           norvegicus]
 gi|149040408|gb|EDL94446.1| soc-2 (suppressor of clear) homolog (C. elegans), isoform CRA_a
           [Rattus norvegicus]
          Length = 582

 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 110/196 (56%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+   L  +  L ++SN+L+ LP  +GCL  L  L +S N L SLP +++N + L 
Sbjct: 114 ILPPSV-KELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLR 172

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKLR++P  + + L +L TL +  N+I  + + + +L  L  L  R N +K LP
Sbjct: 173 MLDLRHNKLREIPSVV-YRLDSLTTLYLRFNRITAVEKDVRNLPRLSTLSIRENKIKQLP 231

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG    +  LD+ +N++  LPD+IG L  L +L
Sbjct: 232 AEIGELCNLITLDVAHN--QLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLNRL 289

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N L + P  + +
Sbjct: 290 GLRYNRLSAIPRSLAK 305



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 101/185 (54%), Gaps = 12/185 (6%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
            L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  +  L+   N+L  LPD
Sbjct: 219 TLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEVLN 133
           TIG  L +L  L +  N++  +P+SL   ++L  L+   N + +LPE  L +L+ L  L 
Sbjct: 279 TIG-NLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLT 337

Query: 134 ISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNPLV 188
           +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N L 
Sbjct: 338 LARNCFQL-----YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLT 392

Query: 189 SPPMD 193
           S P+D
Sbjct: 393 SLPLD 397



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 2/160 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           ++V L++ +NQL  +P  +  L  L+VL +S NLL+ LP  + N R L EL+   NKL  
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ I + L +L+ L +  N++  LP+ + HLT+L  L    N L  LPE++  L NLE 
Sbjct: 463 LPNEIAY-LKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEE 521

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           L ++ N   L +LP+ + L   L  + +    ++ LP  I
Sbjct: 522 LYLNDN-PNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 560



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 8/177 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 357 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  L +L  LR LD   N L+SLP ++  L +L
Sbjct: 415 TKIPEDVSG-LVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           + L ++ N   L TLP  IG L +L  L +  N +T LP+ IG L  L++L L  NP
Sbjct: 474 QKLVLTNN--QLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNP 528



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N+L  LP++IG LS L  L +  N L ++P+++  C +LEELN   N +  L
Sbjct: 263 ITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTL 322

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+++   L+ L +L++  NC                                        
Sbjct: 323 PESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLS 382

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N L  +PED+  L++LEVL +S N   L+ L
Sbjct: 383 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKL 440

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ +G L  L ELD+  NK+ +LP+ I  L+ LQKL L  N L + P  +
Sbjct: 441 PHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 97/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +PESL + L+ +  L +  N  +  P       S +  L++  N +  +P  I    + L
Sbjct: 322 LPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL 381

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP   G    ++  L++  N++  +P+ ++ L SL VL    N LK L
Sbjct: 382 SKLNMKDNQLTSLPLDFG-TWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  L NL  L  L++ +N   LE+LP  I  L  L +L ++ N++TTLP  IG L  L  
Sbjct: 441 PHGLGNLRKLRELDLEEN--KLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTH 498

Query: 180 LSLEGNPLVSPPMDV 194
           L L  N L   P ++
Sbjct: 499 LGLGENLLTHLPEEI 513



 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L ++   I ILP S+  LT L  L    N L+SLP ++  L+NL  L +S+N   L +LP
Sbjct: 105 LDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLP 162

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            S+  L  L  LD+ +NK+  +P  +  L  L  L L  N + +   DV
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITAVEKDV 211


>gi|395735876|ref|XP_003776658.1| PREDICTED: protein LAP2 isoform 4 [Pongo abelii]
          Length = 1346

 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 110/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+S 
Sbjct: 235 LDVSKNNI-----EMVEEGIST 251



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  L+  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTA 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I    S+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+T + + N +  LP  +    ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++ + L N+  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    +L 
Sbjct: 267 QLPETIGS-LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-SWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|345324055|ref|XP_001513272.2| PREDICTED: leucine-rich repeat protein SHOC-2 [Ornithorhynchus
           anatinus]
          Length = 537

 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 112/196 (57%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+P S+   L  +  L ++SN+L+ LP  +GCL  L  L +S N L SLP +++N + L 
Sbjct: 114 MLPSSI-KELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLR 172

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKLR++P  + + L +L TL +  N++  + + + +L+ L +L  R N +K LP
Sbjct: 173 MLDLRHNKLREIPSVV-YRLDSLTTLYLRFNRMTTVEKDIKNLSKLIMLSIRENKIKQLP 231

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG    +  LD+ +N++  LP++IG L  L +L
Sbjct: 232 AEIGELCNLITLDVAHN--QLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLSSLNRL 289

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N L + P  + +
Sbjct: 290 GLRYNRLSAIPRSLAK 305



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 107/213 (50%), Gaps = 28/213 (13%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N++ LDV  NQL+ LP  IG  +++  LD+  N L  LP+TI N  SL  L   +N
Sbjct: 235 GELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLSSLNRLGLRYN 294

Query: 68  KLRQLPDTIG----------------------FELIN----LKTLSINCNKIVILPQSLT 101
           +L  +P ++                       F + +    L  L++  N++  LP    
Sbjct: 295 RLSAIPRSLAKCSALEELNLENNNISTLPEXXFGIFSRAKVLSKLNMKDNQLTSLPLDFG 354

Query: 102 HLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSY 161
             TS+  L+   N L  +PED+  L++LEVL +S N   L+ LP+ +G L  L ELD+  
Sbjct: 355 TWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKLPHGLGNLRKLRELDLEE 412

Query: 162 NKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           NK+ +LP+ I  L+ LQKL L  N L + P  +
Sbjct: 413 NKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 445



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 2/160 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           ++V L++ +NQL  +P  +  L  L+VL +S NLL+ LP  + N R L EL+   NKL  
Sbjct: 358 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 417

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ I + L +L+ L +  N++  LP+ + HLT+L  L    N L  LPE++  L NLE 
Sbjct: 418 LPNEIAY-LKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEE 476

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           L ++ N   L +LP+ + L   L  + +    ++ LP  I
Sbjct: 477 LYLNDN-PNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 515



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 88/160 (55%), Gaps = 6/160 (3%)

Query: 30  IGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTL 86
            G  S+ KVL   ++  N L SLP       S+ ELN   N+L ++P+ +   L++L+ L
Sbjct: 327 FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSG-LVSLEVL 385

Query: 87  SINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPY 146
            ++ N +  LP  L +L  LR LD   N L+SLP ++  L +L+ L ++ N   L TLP 
Sbjct: 386 ILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNN--QLTTLPR 443

Query: 147 SIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
            IG L +L  L +  N +T LP+ IG L  L++L L  NP
Sbjct: 444 GIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNP 483



 Score = 37.7 bits (86), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 28/51 (54%)

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           +  LP SI  L  L EL +  NK+ +LP  +GCL  L  L+L  N L S P
Sbjct: 112 IHMLPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162


>gi|71993783|ref|NP_001022865.1| Protein Y42G9A.3, isoform b [Caenorhabditis elegans]
 gi|351063110|emb|CCD71153.1| Protein Y42G9A.3, isoform b [Caenorhabditis elegans]
          Length = 295

 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/209 (39%), Positives = 109/209 (52%), Gaps = 8/209 (3%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV VLDV  N L  LP  IG LS L  L    NLLE LPK ++   +LE L  + N+L  
Sbjct: 84  NVSVLDVSFNSLSALPEDIGTLSSLTTLIARNNLLEHLPKGLQLLENLEHLYLSGNRLEY 143

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           +P  I   +  LKTL +  N I   P +++ LT LRVL    N L+ +P  +  L  LE 
Sbjct: 144 VPPVI-LTMRKLKTLHLGGNYIDSCPSNISVLTLLRVLYLGGNRLREIPASIGCLDELEN 202

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP- 190
           L +  N   LET+P ++G L  L  L +  N++ TLP  I  LR+LQ+LSL  NPLV   
Sbjct: 203 LGLCDNI--LETIPSTLGDLHYLETLSLHNNRLRTLPTDILNLRRLQQLSLRNNPLVHSF 260

Query: 191 --PMDVVEQGLSAVKGYLSEKMNNDHKSP 217
              MD+    L  + G    +  N HK P
Sbjct: 261 VHNMDLAPPSLKELSGRTVRQ--NYHKVP 287


>gi|327282758|ref|XP_003226109.1| PREDICTED: leucine-rich repeat-containing protein 1-like [Anolis
           carolinensis]
          Length = 524

 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/216 (38%), Positives = 116/216 (53%), Gaps = 27/216 (12%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP+++   + LEE
Sbjct: 120 LPESF-PELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESVAQLQRLEE 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LP+TIG  L NLK L ++ N++  LPQ +  L +L  LD   N L+ LPE
Sbjct: 179 LDLGNNDLYNLPETIG-ALYNLKDLWLDGNQLAELPQEIGSLKNLLCLDISENKLERLPE 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLM-----------------------SLVELD 158
           ++  L +L  L ISQN   LE LP  IG L                        SL EL 
Sbjct: 238 EISGLTSLTDLLISQNL--LEVLPDGIGKLKKLSILKVDQNRLVQLTEAVGDCESLTELV 295

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           ++ N++ TLP SIG L+KL  L+++ N LVS P ++
Sbjct: 296 LTENQLLTLPKSIGRLKKLNVLNVDRNKLVSLPKEI 331



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 107/195 (54%), Gaps = 7/195 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   +R L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L
Sbjct: 27  VPEEIYRYSRSLEELLLD--ANQLRELPKPFFQLVKLRKLGLSDNEIQRLPPEIANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F   +L+    + N +  LP+S   L +L  L      L++L
Sbjct: 85  VELDLSRNDIPEIPESISF-CKSLQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQAL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++ NL NL  L + +N   L  LP S+  L  L ELD+  N +  LP++IG L  L+ 
Sbjct: 144 PENIGNLYNLASLELRENL--LTYLPESVAQLQRLEELDLGNNDLYNLPETIGALYNLKD 201

Query: 180 LSLEGNPLVSPPMDV 194
           L L+GN L   P ++
Sbjct: 202 LWLDGNQLAELPQEI 216



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LD+  N +  +P SI     L+V D SGN L  LP++    ++L  L+ N  
Sbjct: 79  ANFMQLVELDLSRNDIPEIPESISFCKSLQVADFSGNPLTRLPESFPELQNLTCLSVNDI 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP+ IG  L NL +L +  N +  LP+S+  L  L  LD   N L +LPE +  L 
Sbjct: 139 SLQALPENIG-NLYNLASLELRENLLTYLPESVAQLQRLEELDLGNNDLYNLPETIGALY 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +  N   L  LP  IG L +L+ LD+S NK+  LP+ I  L  L  L +  N L
Sbjct: 198 NLKDLWLDGN--QLAELPQEIGSLKNLLCLDISENKLERLPEEISGLTSLTDLLISQNLL 255

Query: 188 VSPPMDVVEQGLSAVK 203
                +V+  G+  +K
Sbjct: 256 -----EVLPDGIGKLK 266



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 109/207 (52%), Gaps = 6/207 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE++ A L N+  L +  NQL  LP  IG L  L  LD+S N LE LP+ I    SL +
Sbjct: 189 LPETIGA-LYNLKDLWLDGNQLAELPQEIGSLKNLLCLDISENKLERLPEEISGLTSLTD 247

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L  LPD IG +L  L  L ++ N++V L +++    SL  L    N L +LP+
Sbjct: 248 LLISQNLLEVLPDGIG-KLKKLSILKVDQNRLVQLTEAVGDCESLTELVLTENQLLTLPK 306

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L  L VLN+ +N   L +LP  IG   SL    V  N+++ +P  I    +L  L 
Sbjct: 307 SIGRLKKLNVLNVDRN--KLVSLPKEIGGCCSLNVFSVRDNRLSRIPPEISQATELHVLD 364

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSE 208
           + GN L+  PM +    L A+  +LS+
Sbjct: 365 VAGNRLLHLPMSLTSLKLKAL--WLSD 389



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 73/159 (45%), Gaps = 26/159 (16%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE ++  L ++  L +  N L+ LP+ IG L KL +L V  N L  L + + +C SL E
Sbjct: 235 LPEEISG-LTSLTDLLISQNLLEVLPDGIGKLKKLSILKVDQNRLVQLTEAVGDCESLTE 293

Query: 62  L-----------------------NANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ 98
           L                       N + NKL  LP  IG    +L   S+  N++  +P 
Sbjct: 294 LVLTENQLLTLPKSIGRLKKLNVLNVDRNKLVSLPKEIGG-CCSLNVFSVRDNRLSRIPP 352

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
            ++  T L VLD   N L  LP  L +L  L+ L +S N
Sbjct: 353 EISQATELHVLDVAGNRLLHLPMSLTSL-KLKALWLSDN 390



 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 27/164 (16%)

Query: 32  CLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINC 90
           C   ++++D     L ++P+ I    RSLEEL  + N+LR+LP    F+L+ L+ L ++ 
Sbjct: 10  CNRHVELIDKRHCSLAAVPEEIYRYSRSLEELLLDANQLRELPKPF-FQLVKLRKLGLSD 68

Query: 91  NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL 150
           N+I                       + LP ++ N + L  L++S+N   +  +P SI  
Sbjct: 69  NEI-----------------------QRLPPEIANFMQLVELDLSRN--DIPEIPESISF 103

Query: 151 LMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             SL   D S N +T LP+S   L+ L  LS+    L + P ++
Sbjct: 104 CKSLQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQALPENI 147


>gi|426384524|ref|XP_004058812.1| PREDICTED: protein LAP2 isoform 1 [Gorilla gorilla gorilla]
          Length = 1371

 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 110/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+S 
Sbjct: 235 LDVSKNNI-----EMVEEGIST 251



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  L+  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I    S+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+T + + N +  LP  +    ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++ + L N+  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    +L 
Sbjct: 267 QLPETIGS-LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-SWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|418719453|ref|ZP_13278653.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410744606|gb|EKQ93347.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
          Length = 218

 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/153 (43%), Positives = 97/153 (63%), Gaps = 3/153 (1%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           + +++LD+S   L +LPK I   ++L   N   N+L+ LP  IG +L NLK L++N N++
Sbjct: 42  TDVRILDLSNKRLTTLPKEIGELQNLTVFNLYVNQLKTLPKEIG-KLKNLKYLNLNYNEL 100

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
             LPQ +  L +L VLD   N L +LP+++  L NL VL+++ N   L TLP  IG L S
Sbjct: 101 TTLPQEIGKLKNLTVLDLTNNQLTTLPKEIGKLKNLTVLDLTNN--QLTTLPKEIGKLQS 158

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           L ELD+S N++TTLP  IG L+ LQ+L L+  P
Sbjct: 159 LRELDLSGNQLTTLPKDIGKLQNLQELYLDDIP 191



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/162 (35%), Positives = 95/162 (58%), Gaps = 5/162 (3%)

Query: 33  LSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNK 92
           LS+LK  ++      +L + ++N   +  L+ +  +L  LP  IG EL NL   ++  N+
Sbjct: 20  LSQLKAQEIGT--YHNLTEALQNPTDVRILDLSNKRLTTLPKEIG-ELQNLTVFNLYVNQ 76

Query: 93  IVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLM 152
           +  LP+ +  L +L+ L+   N L +LP+++  L NL VL+++ N   L TLP  IG L 
Sbjct: 77  LKTLPKEIGKLKNLKYLNLNYNELTTLPQEIGKLKNLTVLDLTNN--QLTTLPKEIGKLK 134

Query: 153 SLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +L  LD++ N++TTLP  IG L+ L++L L GN L + P D+
Sbjct: 135 NLTVLDLTNNQLTTLPKEIGKLQSLRELDLSGNQLTTLPKDI 176



 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 56/88 (63%), Gaps = 2/88 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L N+ VLD+ +NQL  LP  IG L  L VLD++ N L +LPK I   +SL E
Sbjct: 103 LPQEI-GKLKNLTVLDLTNNQLTTLPKEIGKLKNLTVLDLTNNQLTTLPKEIGKLQSLRE 161

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSIN 89
           L+ + N+L  LP  IG +L NL+ L ++
Sbjct: 162 LDLSGNQLTTLPKDIG-KLQNLQELYLD 188


>gi|114599987|ref|XP_001162804.1| PREDICTED: protein LAP2 isoform 4 [Pan troglodytes]
 gi|397514425|ref|XP_003827488.1| PREDICTED: protein LAP2 isoform 1 [Pan paniscus]
 gi|410217134|gb|JAA05786.1| erbb2 interacting protein [Pan troglodytes]
 gi|410217138|gb|JAA05788.1| erbb2 interacting protein [Pan troglodytes]
 gi|410260628|gb|JAA18280.1| erbb2 interacting protein [Pan troglodytes]
 gi|410300756|gb|JAA28978.1| erbb2 interacting protein [Pan troglodytes]
 gi|410354909|gb|JAA44058.1| erbb2 interacting protein [Pan troglodytes]
          Length = 1371

 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 110/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+S 
Sbjct: 235 LDVSKNNI-----EMVEEGIST 251



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  L+  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I    S+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+T + + N +  LP  +    ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++ + L N+  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    +L 
Sbjct: 267 QLPETIGS-LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-SWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|395735870|ref|XP_002815652.2| PREDICTED: protein LAP2 isoform 1 [Pongo abelii]
          Length = 1371

 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 110/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+S 
Sbjct: 235 LDVSKNNI-----EMVEEGIST 251



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  L+  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTA 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I    S+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+T + + N +  LP  +    ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++ + L N+  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    +L 
Sbjct: 267 QLPETIGS-LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-SWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|390459893|ref|XP_003732381.1| PREDICTED: LOW QUALITY PROTEIN: protein LAP2-like [Callithrix
           jacchus]
          Length = 1412

 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGL- 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 111/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 VVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+SA
Sbjct: 235 LDVSKNNI-----EMVEEGISA 251



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFNFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 106/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE +  L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGLLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  L+  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 94/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+ E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 244 MVEEGISA-CENLQDLLLSSNSLQQLPETIGLLKNITTLKIDENQLMYLPDSIGGLISVE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP +IG +L NL+T + + N +  LP  +    ++ VL    N L++LP
Sbjct: 303 ELDCSFNEVEALPSSIG-QLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402


>gi|55770895|ref|NP_001006600.1| protein LAP2 isoform 7 [Homo sapiens]
          Length = 1302

 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 105/187 (56%), Gaps = 10/187 (5%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L  + A+ N + +LPD 
Sbjct: 74  LSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPD- 132

Query: 76  IGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            GF +L+NL  L +N   +  LP +   LT L++L+ R N LK LP+ +  L  LE L++
Sbjct: 133 -GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDL 191

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N ++ E +P  +  L  L E  +  N++T +P  IG L++L  L +  N +     ++
Sbjct: 192 GSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EM 244

Query: 195 VEQGLSA 201
           VE+G+S 
Sbjct: 245 VEEGIST 251



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  L+  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I    S+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+T + + N +  LP  +    ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++   L N+  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    +L 
Sbjct: 267 QLPETI-GSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-SWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|261277896|sp|B4QVR7.2|SUR8_DROSI RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
          Length = 680

 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 112/191 (58%), Gaps = 4/191 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP S     +++  L ++SN++  LP  IGCL  L+ L ++ N L SLP++++NC  L+
Sbjct: 174 VIP-STVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSLPESLQNCSQLK 232

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKL ++P  I + L +L TL +  N+I  +   L  L +L +L  R N ++ L 
Sbjct: 233 VLDLRHNKLAEIPPVI-YRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELG 291

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             +  L+NL  L++S N  +LE LP  IG  ++L  LD+ +N++  +PDSIG L+ L +L
Sbjct: 292 SAIGALVNLTTLDVSHN--HLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRL 349

Query: 181 SLEGNPLVSPP 191
            +  N L S P
Sbjct: 350 GMRYNRLSSVP 360



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 115/245 (46%), Gaps = 51/245 (20%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +    +N+  LD+  N+L  +P+SIG L  L  L +  N L S+P T++NC+S++E
Sbjct: 313 LPEDI-GNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPATLKNCKSMDE 371

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ------------SLTH------- 102
            N   N + QLPD +   L  L T++++ N+    P             +L H       
Sbjct: 372 FNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIP 431

Query: 103 ---------LTSLRV--------------------LDARLNCLKSLPEDLENLINLEVLN 133
                    LT L +                    L+   N L+ LP+D+ NL NLE+L 
Sbjct: 432 YGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILI 491

Query: 134 ISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMD 193
           +S N   L+ +P +IG L  L  LD+  N+I  LP  IG L +LQ+L L+ N +   P  
Sbjct: 492 LSNNM--LKKIPNTIGNLRRLRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPRS 549

Query: 194 VVEQG 198
           +   G
Sbjct: 550 IGHLG 554



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 97/161 (60%), Gaps = 2/161 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           +N+V L++ +N L+ LP+ I  L  L++L +S N+L+ +P TI N R L  L+   N++ 
Sbjct: 462 VNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIE 521

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG  L  L+ L +  N+I +LP+S+ HL +L  L    N L+ LPE++ +L +LE
Sbjct: 522 VLPHEIGL-LHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLE 580

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
            L I+QN   LE LP+ + L  +L  L++    ++T+P  I
Sbjct: 581 NLYINQN-PGLEKLPFELALCQNLKYLNIDKCPLSTIPPEI 620



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 26/180 (14%)

Query: 35  KLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
           ++K LD+S + +  +P T++ C  L EL    NK+ QLP  IG  L++L+ L++N N + 
Sbjct: 161 RIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGC-LVSLRNLALNENSLT 219

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLP-----------------------EDLENLINLEV 131
            LP+SL + + L+VLD R N L  +P                       +DL  L+NL +
Sbjct: 220 SLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTM 279

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L++ +N   +  L  +IG L++L  LDVS+N +  LP+ IG    L  L L+ N L+  P
Sbjct: 280 LSLREN--KIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIP 337



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 99/185 (53%), Gaps = 4/185 (2%)

Query: 3   PESLTARLLNVVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEE 61
           P    A+  NV  +++  N++  +P  I   +K L  L++  N+L +LP  I    ++ E
Sbjct: 407 PTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVE 466

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N L++LPD I   L NL+ L ++ N +  +P ++ +L  LR+LD   N ++ LP 
Sbjct: 467 LNLATNALQKLPDDI-MNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIEVLPH 525

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L  L+ L +  N   +  LP SIG L +L  L VS N +  LP+ IG L  L+ L 
Sbjct: 526 EIGLLHELQRLILQTN--QITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLY 583

Query: 182 LEGNP 186
           +  NP
Sbjct: 584 INQNP 588



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 103/188 (54%), Gaps = 4/188 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L+N+ +L +  N+++ L ++IG L  L  LDVS N LE LP+ I NC +L  L+   N+
Sbjct: 273 QLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNE 332

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLI 127
           L  +PD+IG  L +L  L +  N++  +P +L +  S+   +   N +  LP+  L +L 
Sbjct: 333 LLDIPDSIG-NLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLS 391

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNP 186
            L  + +S+N Q+            ++  +++ +N+I  +P  I    K L KL+++ N 
Sbjct: 392 GLTTITLSRN-QFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENM 450

Query: 187 LVSPPMDV 194
           L + P+D+
Sbjct: 451 LTALPLDI 458



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +P+ + A L  +  + +  NQ    P       + +  +++  N ++ +P  I    + L
Sbjct: 382 LPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGL 441

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N L  LP  IG   +N+  L++  N +  LP  + +L +L +L    N LK +
Sbjct: 442 TKLNMKENMLTALPLDIG-TWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKI 500

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  + NL  L +L++ +N   +E LP+ IGLL  L  L +  N+IT LP SIG L  L  
Sbjct: 501 PNTIGNLRRLRILDLEEN--RIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTH 558

Query: 180 LSLEGNPLVSPPMDV 194
           LS+  N L   P ++
Sbjct: 559 LSVSENNLQFLPEEI 573


>gi|440909593|gb|ELR59482.1| Leucine-rich repeat-containing protein 1, partial [Bos grunniens
           mutus]
          Length = 516

 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 111/193 (57%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 112 LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 170

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 171 LDLGNNEIYNLPESIGA-LLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPE 229

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L  L ISQN   LE LP  IG L  L  L V  N++T LP+++G    L +L 
Sbjct: 230 EISGLTSLTDLVISQNL--LEMLPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELV 287

Query: 182 LEGNPLVSPPMDV 194
           L  N L++ P  +
Sbjct: 288 LTENRLLTLPKSI 300



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 103/187 (55%), Gaps = 5/187 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           AR L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L EL+ + N
Sbjct: 27  ARSLEELLLD--ANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRN 84

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            + ++P++I F    L+    + N +  LP+S   L +L  L      L+SLPE++ NL 
Sbjct: 85  DIPEIPESISF-CKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLY 143

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L + +N   L  LP S+  L  L ELD+  N+I  LP+SIG L  L+ L L+GN L
Sbjct: 144 NLASLELRENL--LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQL 201

Query: 188 VSPPMDV 194
              P ++
Sbjct: 202 SELPQEI 208



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 87/250 (34%), Positives = 119/250 (47%), Gaps = 32/250 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP++    ++L  L+ N  
Sbjct: 71  ANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDI 130

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD--------------ARL 113
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD              A L
Sbjct: 131 SLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALL 189

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L  LP+++ NL NL  L++S+N   LE LP  I  L SL +L +S N +
Sbjct: 190 HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN--RLERLPEEISGLTSLTDLVISQNLL 247

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVG 224
             LPD IG L+KL  L ++ N L   P + V    S  +  L+E  N     PK    +G
Sbjct: 248 EMLPDGIGKLKKLSILKVDQNRLTQLP-EAVGDCESLTELVLTE--NRLLTLPKS---IG 301

Query: 225 KLVKYGTFNG 234
           KL K    N 
Sbjct: 302 KLKKLSNLNA 311



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 113/225 (50%), Gaps = 11/225 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+ A LL++  L +  NQL  LP  IG L  L  LDVS N LE LP+ I    SL +
Sbjct: 181 LPESIGA-LLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTD 239

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L  LPD IG +L  L  L ++ N++  LP+++    SL  L    N L +LP+
Sbjct: 240 LVISQNLLEMLPDGIG-KLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPK 298

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L  L  LN  +N   L +LP  IG   SL    V  N++T +P  +    +L  L 
Sbjct: 299 SIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSRAAELHVLD 356

Query: 182 LEGNPLVSPPMDVVEQGLSAV-------KGYLSEKMNNDHKSPKK 219
           + GN L   P+ +    L A+       +  L+ + + DH + +K
Sbjct: 357 VAGNRLSHLPLSLTALNLKALWLSDNQAQPLLTFQTDTDHTTGEK 401



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 2/138 (1%)

Query: 57  RSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
           R +E ++     L  +PD +     +L+ L ++ N++  LP+    L  LR L    N +
Sbjct: 4   RHVETIDRRHCSLLYVPDEVYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 63

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + LP ++ N + L  L++S+N   +  +P SI    +L   D S N +T LP+S   L+ 
Sbjct: 64  QRLPPEIANFMQLVELDVSRN--DIPEIPESISFCKALQIADFSGNPLTRLPESFPELQN 121

Query: 177 LQKLSLEGNPLVSPPMDV 194
           L  LS+    L S P ++
Sbjct: 122 LTCLSVNDISLQSLPENI 139


>gi|387016708|gb|AFJ50473.1| Leucine-rich repeat protein SHOC-2-like [Crotalus adamanteus]
          Length = 582

 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 113/196 (57%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+   L  +  L ++ N+L+ LP  +GCL  L+ L +S N L SLP ++ N + L 
Sbjct: 114 LLPSSV-KELTQLTELYLYGNKLQSLPAEVGCLVNLETLALSENSLTSLPDSLGNLKQLR 172

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            ++   NKLR++P  + + L +L TL +  N+I  + + + +L++L +L  R N +K LP
Sbjct: 173 MVDLRHNKLREIPPVV-YRLTSLTTLYLRFNRITSVEKDIKNLSNLTMLSIRENKIKQLP 231

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG    + +LD+ +N++  LPD+IG L  L+ L
Sbjct: 232 AEIGELCNLITLDVAHN--QLEHLPKEIGNCTQITKLDLQHNELLDLPDTIGNLSTLKSL 289

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N L + P  + +
Sbjct: 290 GLRYNRLSAIPRTLAQ 305



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 105/180 (58%), Gaps = 3/180 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N V LD+    +  LP+S+  L++L  L + GN L+SLP  +    +LE L  + N L  
Sbjct: 101 NSVRLDLAKRSIHLLPSSVKELTQLTELYLYGNKLQSLPAEVGCLVNLETLALSENSLTS 160

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LPD++G  L  L+ + +  NK+  +P  +  LTSL  L  R N + S+ +D++NL NL +
Sbjct: 161 LPDSLG-NLKQLRMVDLRHNKLREIPPVVYRLTSLTTLYLRFNRITSVEKDIKNLSNLTM 219

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L+I +N   ++ LP  IG L +L+ LDV++N++  LP  IG   ++ KL L+ N L+  P
Sbjct: 220 LSIREN--KIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITKLDLQHNELLDLP 277



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 107/190 (56%), Gaps = 12/190 (6%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+ +L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  + +L+   N+L
Sbjct: 214 LSNLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITKLDLQHNEL 273

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLIN 128
             LPDTIG  L  LK+L +  N++  +P++L   + L  L+   N + +LPE  L +L+N
Sbjct: 274 LDLPDTIG-NLSTLKSLGLRYNRLSAIPRTLAQCSKLDELNLENNIISTLPEGLLSSLVN 332

Query: 129 LEVLNISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLE 183
           L  L +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++
Sbjct: 333 LTSLTLARNCFQS-----YPVGGPSQFSTIYALNMEHNRINKIPFGIFSRAKVLSKLNMK 387

Query: 184 GNPLVSPPMD 193
            N L S P+D
Sbjct: 388 DNQLTSLPLD 397



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 108/230 (46%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N+L  LP++IG LS LK L +  N L ++P+T+  C  L+ELN   N +  L
Sbjct: 263 ITKLDLQHNELLDLPDTIGNLSTLKSLGLRYNRLSAIPRTLAQCSKLDELNLENNIISTL 322

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+ +   L+NL +L++  NC                                        
Sbjct: 323 PEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYALNMEHNRINKIPFGIFSRAKVLS 382

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N L  +PED+  L++LEVL +S N   L  L
Sbjct: 383 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLNKIPEDVSGLVSLEVLILSNNL--LRNL 440

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ IG L  L ELD+  NK+ +LP+ I  LR LQ+L L  N L + P  +
Sbjct: 441 PHGIGNLRKLRELDLEENKLESLPNEIAYLRDLQRLILTNNQLSTLPRGI 490



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 2/159 (1%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +V L++ +NQL  +P  +  L  L+VL +S NLL +LP  I N R L EL+   NKL  L
Sbjct: 404 MVELNLATNQLNKIPEDVSGLVSLEVLILSNNLLRNLPHGIGNLRKLRELDLEENKLESL 463

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P+ I + L +L+ L +  N++  LP+ + HL +L  L    N L  LPE++  L NLE L
Sbjct: 464 PNEIAY-LRDLQRLILTNNQLSTLPRGIGHLINLTHLGLGENFLTQLPEEIGTLENLEEL 522

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
            ++ N  +L +LP+ + L   L  + +    ++TLP  I
Sbjct: 523 YLNDN-PHLNSLPFELALCSKLSIMSIENCPLSTLPAQI 560



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 111/216 (51%), Gaps = 6/216 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP  + +R   +  L++  NQL  LP   G  + +  L+++ N L  +P+ +    SLE 
Sbjct: 370 IPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLNKIPEDVSGLVSLEV 429

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N LR LP  IG  L  L+ L +  NK+  LP  + +L  L+ L    N L +LP 
Sbjct: 430 LILSNNLLRNLPHGIG-NLRKLRELDLEENKLESLPNEIAYLRDLQRLILTNNQLSTLPR 488

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYN-KITTLPDSIGCLRKLQKL 180
            + +LINL  L + +NF  L  LP  IG L +L EL ++ N  + +LP  +    KL  +
Sbjct: 489 GIGHLINLTHLGLGENF--LTQLPEEIGTLENLEELYLNDNPHLNSLPFELALCSKLSIM 546

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKS 216
           S+E  PL + P  +V  G S +  +L  KM   +++
Sbjct: 547 SIENCPLSTLPAQIVAGGPSFIIQFL--KMQGPYRA 580



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 98/177 (55%), Gaps = 8/177 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 357 IYALNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  + +L  LR LD   N L+SLP ++  L +L
Sbjct: 415 NKIPEDVSG-LVSLEVLILSNNLLRNLPHGIGNLRKLRELDLEENKLESLPNEIAYLRDL 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           + L ++ N   L TLP  IG L++L  L +  N +T LP+ IG L  L++L L  NP
Sbjct: 474 QRLILTNN--QLSTLPRGIGHLINLTHLGLGENFLTQLPEEIGTLENLEELYLNDNP 528


>gi|332821306|ref|XP_003310748.1| PREDICTED: protein LAP2 [Pan troglodytes]
 gi|397514433|ref|XP_003827492.1| PREDICTED: protein LAP2 isoform 5 [Pan paniscus]
          Length = 1346

 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 110/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+S 
Sbjct: 235 LDVSKNNI-----EMVEEGIST 251



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  L+  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I    S+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+T + + N +  LP  +    ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++ + L N+  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    +L 
Sbjct: 267 QLPETIGS-LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-SWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|158335195|ref|YP_001516367.1| hypothetical protein AM1_2038 [Acaryochloris marina MBIC11017]
 gi|158305436|gb|ABW27053.1| leucine-rich repeat containing outermembrane protein, putative
           [Acaryochloris marina MBIC11017]
          Length = 659

 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/210 (38%), Positives = 113/210 (53%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLK-----------------------VLDVSGN 44
           A+L+N+  LD++ N L  LP  IG L+ LK                        LD SGN
Sbjct: 357 AQLINLQSLDLYDNPLTHLPQEIGTLTHLKKLNLSKTQLTNLPPAIMKLKRLQSLDFSGN 416

Query: 45  LLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLT 104
            L SLP  I    SL+ELN +FN+L +LP  IG +L NL+ L +  NK+  LP+ +  L 
Sbjct: 417 QLSSLPIEITQIISLKELNLSFNQLSKLPADIG-QLNNLQELDLRENKLDSLPKEIGQLN 475

Query: 105 SLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
           +L+ L  R N L +LP D+  L NL+ L+I  N   L +LP  IG L SL  L +  N++
Sbjct: 476 NLKSLVLRFNQLNTLPPDIGQLKNLKSLSIHGN--TLSSLPPEIGKLSSLKSLILRSNRL 533

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           ++LP  IG L  L  L+L  N L S P+++
Sbjct: 534 SSLPPEIGKLHNLNSLNLVENQLSSLPIEM 563



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 107/188 (56%), Gaps = 3/188 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A+L ++  LD+ +NQL  LP+S+  L +L+ LD+S N L+SLP  I     L  L+   N
Sbjct: 127 AQLKHLQSLDLTANQLTNLPSSVTQLKELQTLDLSNNWLKSLPPEIAQLNKLRRLDLFRN 186

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+TL +  N +  LP ++  LT+L+ LD R   LK LP ++  L 
Sbjct: 187 QLSGLPPEI-IKLNNLQTLGLGHNTLSSLPATIAKLTNLKKLDLRATSLKRLPPEILQLT 245

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L++S N   L +LP  I  L++L  L + + +++  P  +  L  LQ+L L GN L
Sbjct: 246 KLQELDLSDN--KLSSLPPEIAQLVNLQSLRLKFTQLSHPPAELSQLTHLQELDLSGNSL 303

Query: 188 VSPPMDVV 195
            S P ++ 
Sbjct: 304 SSLPREMA 311



 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 110/212 (51%), Gaps = 26/212 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A+L N+  LD+ +  LK LP  I  L+KL+ LD+S N L SLP  I    +L+ L   F 
Sbjct: 219 AKLTNLKKLDLRATSLKRLPPEILQLTKLQELDLSDNKLSSLPPEIAQLVNLQSLRLKFT 278

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSL-----------------------THLT 104
           +L   P  +  +L +L+ L ++ N +  LP+ +                       T LT
Sbjct: 279 QLSHPPAELS-QLTHLQELDLSGNSLSSLPREMAKLKKLQKLDLSYNSLRNLPTVITQLT 337

Query: 105 SLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
           +LR LD R   L SLP ++  LINL+ L++  N   L  LP  IG L  L +L++S  ++
Sbjct: 338 TLRSLDLRSTQLNSLPPEIAQLINLQSLDLYDN--PLTHLPQEIGTLTHLKKLNLSKTQL 395

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           T LP +I  L++LQ L   GN L S P+++ +
Sbjct: 396 TNLPPAIMKLKRLQSLDFSGNQLSSLPIEITQ 427



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 112/208 (53%), Gaps = 22/208 (10%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +++++  L++  NQL  LP  IG L+ L+ LD+  N L+SLPK I    +L+ L   FN
Sbjct: 426 TQIISLKELNLSFNQLSKLPADIGQLNNLQELDLRENKLDSLPKEIGQLNNLKSLVLRFN 485

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NLK+LSI+ N +  LP  +  L+SL+ L  R N L SLP ++  L 
Sbjct: 486 QLNTLPPDIG-QLKNLKSLSIHGNTLSSLPPEIGKLSSLKSLILRSNRLSSLPPEIGKLH 544

Query: 128 NLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELDVSYNKITT 166
           NL  LN+ +N                        L  LP  +G L SL  +D+S N+++ 
Sbjct: 545 NLNSLNLVENQLSSLPIEMRKLQNLRELDLRNNRLRNLPLEMGQLKSLGLVDLSDNQLSN 604

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           LP  +G L  L  LSL+ N L + P+++
Sbjct: 605 LPKEMGQLYNLTVLSLDRNQLSNLPIEI 632



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/182 (38%), Positives = 102/182 (56%), Gaps = 3/182 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  NQL  LP  IG L  LK L + GN L SLP  I    SL+ L    N
Sbjct: 472 GQLNNLKSLVLRFNQLNTLPPDIGQLKNLKSLSIHGNTLSSLPPEIGKLSSLKSLILRSN 531

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL +L++  N++  LP  +  L +LR LD R N L++LP ++  L 
Sbjct: 532 RLSSLPPEIG-KLHNLNSLNLVENQLSSLPIEMRKLQNLRELDLRNNRLRNLPLEMGQLK 590

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L ++++S N   L  LP  +G L +L  L +  N+++ LP  I  L    K+++EGNPL
Sbjct: 591 SLGLVDLSDN--QLSNLPKEMGQLYNLTVLSLDRNQLSNLPIEIEQLWPSTKITVEGNPL 648

Query: 188 VS 189
            S
Sbjct: 649 PS 650



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 102/189 (53%), Gaps = 3/189 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++ VL++  NQL  LP  IG L  L  LD+  N L  LP  +    +L +L   FN
Sbjct: 58  GQLKHLEVLNLRDNQLSRLPPEIGQLIHLTTLDLCSNRLNRLPAEVTQLTTLSKLALCFN 117

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  +  +L +L++L +  N++  LP S+T L  L+ LD   N LKSLP ++  L 
Sbjct: 118 QLSHLPMEMA-QLKHLQSLDLTANQLTNLPSSVTQLKELQTLDLSNNWLKSLPPEIAQLN 176

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L  L++ +N   L  LP  I  L +L  L + +N +++LP +I  L  L+KL L    L
Sbjct: 177 KLRRLDLFRN--QLSGLPPEIIKLNNLQTLGLGHNTLSSLPATIAKLTNLKKLDLRATSL 234

Query: 188 VSPPMDVVE 196
              P ++++
Sbjct: 235 KRLPPEILQ 243



 Score = 81.6 bits (200), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 90/171 (52%), Gaps = 4/171 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P S+T +L  +  LD+ +N LK LP  I  L+KL+ LD+  N L  LP  I    +L+ 
Sbjct: 145 LPSSVT-QLKELQTLDLSNNWLKSLPPEIAQLNKLRRLDLFRNQLSGLPPEIIKLNNLQT 203

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N L  LP TI  +L NLK L +    +  LP  +  LT L+ LD   N L SLP 
Sbjct: 204 LGLGHNTLSSLPATIA-KLTNLKKLDLRATSLKRLPPEILQLTKLQELDLSDNKLSSLPP 262

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
           ++  L+NL+ L +   F  L   P  +  L  L ELD+S N +++LP  + 
Sbjct: 263 EIAQLVNLQSLRLK--FTQLSHPPAELSQLTHLQELDLSGNSLSSLPREMA 311



 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/192 (35%), Positives = 106/192 (55%), Gaps = 3/192 (1%)

Query: 3   PESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEEL 62
           P +  ++L ++  LD+  N L  LP  +  L KL+ LD+S N L +LP  I    +L  L
Sbjct: 283 PPAELSQLTHLQELDLSGNSLSSLPREMAKLKKLQKLDLSYNSLRNLPTVITQLTTLRSL 342

Query: 63  NANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED 122
           +    +L  LP  I  +LINL++L +  N +  LPQ +  LT L+ L+     L +LP  
Sbjct: 343 DLRSTQLNSLPPEIA-QLINLQSLDLYDNPLTHLPQEIGTLTHLKKLNLSKTQLTNLPPA 401

Query: 123 LENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           +  L  L+ L+ S N   L +LP  I  ++SL EL++S+N+++ LP  IG L  LQ+L L
Sbjct: 402 IMKLKRLQSLDFSGN--QLSSLPIEITQIISLKELNLSFNQLSKLPADIGQLNNLQELDL 459

Query: 183 EGNPLVSPPMDV 194
             N L S P ++
Sbjct: 460 RENKLDSLPKEI 471



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 91/181 (50%), Gaps = 3/181 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+    L  LP  IG L  L+VL++  N L  LP  I     L  L+   N+L +LP  
Sbjct: 43  LDLQGLSLTQLPLEIGQLKHLEVLNLRDNQLSRLPPEIGQLIHLTTLDLCSNRLNRLPAE 102

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           +  +L  L  L++  N++  LP  +  L  L+ LD   N L +LP  +  L  L+ L++S
Sbjct: 103 VT-QLTTLSKLALCFNQLSHLPMEMAQLKHLQSLDLTANQLTNLPSSVTQLKELQTLDLS 161

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            N  +L++LP  I  L  L  LD+  N+++ LP  I  L  LQ L L  N L S P  + 
Sbjct: 162 NN--WLKSLPPEIAQLNKLRRLDLFRNQLSGLPPEIIKLNNLQTLGLGHNTLSSLPATIA 219

Query: 196 E 196
           +
Sbjct: 220 K 220



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 104 TSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           T    LD +   L  LP ++  L +LEVLN+  N   L  LP  IG L+ L  LD+  N+
Sbjct: 38  TQASQLDLQGLSLTQLPLEIGQLKHLEVLNLRDN--QLSRLPPEIGQLIHLTTLDLCSNR 95

Query: 164 ITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           +  LP  +  L  L KL+L  N L   PM++ +
Sbjct: 96  LNRLPAEVTQLTTLSKLALCFNQLSHLPMEMAQ 128


>gi|119571718|gb|EAW51333.1| erbb2 interacting protein, isoform CRA_b [Homo sapiens]
          Length = 1460

 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 110/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+S 
Sbjct: 235 LDVSKNNI-----EMVEEGIST 251



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  L+  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I    S+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+T + + N +  LP  +    ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++ + L N+  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    +L 
Sbjct: 267 QLPETIGS-LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-SWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|418730417|ref|ZP_13288911.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774626|gb|EKR54630.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 428

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 111/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD++ N+L  LP  IG L  L+ L +S N L +LP+      +L+ELN + N
Sbjct: 114 GKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDN 173

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+TL++  N++  L + +  L +L+ L+   N L +LP ++  L 
Sbjct: 174 QLTTLPQEIG-QLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQ 232

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  LN+S N   L TL   IG L +L  L++S N++TTLP  IG L+ L  L+L GN L
Sbjct: 233 NLHTLNLSGN--QLTTLSIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQL 290

Query: 188 VSPPMDV 194
            +  +++
Sbjct: 291 TTLSIEI 297



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 110/186 (59%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L++  NQL  LP  IG L  L  L++SGN L +L   I   ++L  LN + N+
Sbjct: 207 QLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQ 266

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG +L NL TL+++ N++  L   +  L +L+ L+   N L +L +++E L N
Sbjct: 267 LTTLPIEIG-KLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKN 325

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L++S  +  L  LP  IG L +L EL++  N++T LP  IG L+ LQ LSL  N L+
Sbjct: 326 LQTLSLS--YNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLM 383

Query: 189 SPPMDV 194
           + P ++
Sbjct: 384 TFPKEI 389



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 105/184 (57%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           LNV VLD+       LP  I  L  L+ L +  N L++LPK I   ++L+ELN + N+L 
Sbjct: 48  LNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLT 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG +L NL+ L +  N++ ILP  +  L +L+ L    N L +LP +   L NL+
Sbjct: 108 ILPKEIG-KLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+S N   L TLP  IG L +L  L++  N++TTL   I  L+ LQ L+L  N L + 
Sbjct: 167 ELNLSDN--QLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTL 224

Query: 191 PMDV 194
           P+++
Sbjct: 225 PIEI 228



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 113/208 (54%), Gaps = 24/208 (11%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L +  N+LK LP  IG L  L+ L++S N L  LPK I    +L+ L+   N+
Sbjct: 69  QLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNR 128

Query: 69  LRQLPDTIG----------------------FELINLKTLSINCNKIVILPQSLTHLTSL 106
           L  LP  IG                       +L NL+ L+++ N++  LPQ +  L +L
Sbjct: 129 LTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNL 188

Query: 107 RVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITT 166
           + L+ + N L +L +++E L NL+ LN+S N   L TLP  IG L +L  L++S N++TT
Sbjct: 189 QTLNLKSNQLTTLFKEIEQLKNLQTLNLSDN--QLTTLPIEIGKLQNLHTLNLSGNQLTT 246

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L   IG L+ L  L+L  N L + P+++
Sbjct: 247 LSIEIGKLQNLHTLNLSDNQLTTLPIEI 274



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  NQL  L   IG L  L  L++S N L +LP  I   ++L  LN + N
Sbjct: 229 GKLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGN 288

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  L   IG +L NL+ L+++ N++  L + +  L +L+ L    N L  LP+++  L 
Sbjct: 289 QLTTLSIEIG-KLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQ 347

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEG-NP 186
           NL+ LN+  N   L  LP  IG L +L  L +  N++ T P  IG L+ LQ L L G N 
Sbjct: 348 NLQELNLWNN--QLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHNQ 405

Query: 187 LVSPPMDVVEQGLSAVKGYLSE 208
             S   + + + L   K Y  +
Sbjct: 406 FSSEEKERIRKLLPNCKIYFGD 427



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 60/99 (60%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +  ++RVLD       +LP+++E L NL+ L +  N   L+TLP  IG L +L 
Sbjct: 40  LTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDN--RLKTLPKEIGQLKNLQ 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           EL++S N++T LP  IG L  LQ+L L  N L   P+++
Sbjct: 98  ELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEI 136


>gi|332711880|ref|ZP_08431810.1| Leucine Rich Repeat family protein [Moorea producens 3L]
 gi|332349208|gb|EGJ28818.1| Leucine Rich Repeat family protein [Moorea producens 3L]
          Length = 948

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/207 (39%), Positives = 117/207 (56%), Gaps = 3/207 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+      +N++ LD+  N L  LP S+G L  LK L +S N L+ LP ++ N  +L E
Sbjct: 85  LPQKNFGNFINLIELDLSKNNLINLPESLGELPNLKKLYLSRNQLKKLPVSLGNLYNLTE 144

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + NKL   P+++G  L NL  L +  N +  LP  L +   L  L    N L  LPE
Sbjct: 145 LDLSLNKLNTFPESLG-NLSNLSRLDLVGNNLNKLPDFLGNFYKLTELYLWNNQLTHLPE 203

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L N++NL  L++  N   L  LP SIG L +L  LD+SYN+++ LP++I  L  L  L 
Sbjct: 204 SLGNILNLSKLHLWNN--QLTYLPKSIGNLSNLTSLDLSYNQLSKLPENIVNLSNLTHLD 261

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSE 208
           L GNPLV PP +VV  G+ A+K Y  +
Sbjct: 262 LSGNPLVVPPPEVVSGGVGAIKQYFRQ 288



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 93/169 (55%), Gaps = 2/169 (1%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELIN 82
           L  +P  +  L +++VL++SGN +  +P+ I N  +L  L+ + N++ +LP       IN
Sbjct: 36  LTNIPEEVFELKQIRVLNLSGNRIYQIPEYISNITNLVRLDLSRNQITKLPQKNFGNFIN 95

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           L  L ++ N ++ LP+SL  L +L+ L    N LK LP  L NL NL  L++S N   L 
Sbjct: 96  LIELDLSKNNLINLPESLGELPNLKKLYLSRNQLKKLPVSLGNLYNLTELDLSLN--KLN 153

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           T P S+G L +L  LD+  N +  LPD +G   KL +L L  N L   P
Sbjct: 154 TFPESLGNLSNLSRLDLVGNNLNKLPDFLGNFYKLTELYLWNNQLTHLP 202


>gi|358679316|ref|NP_001240627.1| protein LAP2 isoform 4 [Homo sapiens]
          Length = 1346

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 110/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+S 
Sbjct: 235 LDVSKNNI-----EMVEEGIST 251



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  L+  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 80.5 bits (197), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I    S+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+T + + N +  LP  +    ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++ + L N+  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    +L 
Sbjct: 267 QLPETIGS-LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-SWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|8923909|ref|NP_061165.1| protein LAP2 isoform 2 [Homo sapiens]
 gi|8572221|gb|AAF77048.1|AF263744_1 erbb2-interacting protein ERBIN [Homo sapiens]
 gi|20521800|dbj|BAA86539.2| KIAA1225 protein [Homo sapiens]
 gi|119571719|gb|EAW51334.1| erbb2 interacting protein, isoform CRA_c [Homo sapiens]
 gi|168269750|dbj|BAG10002.1| erbb2 interacting protein [synthetic construct]
          Length = 1371

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 110/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+S 
Sbjct: 235 LDVSKNNI-----EMVEEGIST 251



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  L+  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I    S+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+T + + N +  LP  +    ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++ + L N+  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    +L 
Sbjct: 267 QLPETIGS-LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-SWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|296475861|tpg|DAA17976.1| TPA: erbb2 interacting protein isoform 2 [Bos taurus]
          Length = 1302

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 106/183 (57%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LD+S N +E + + I  C +L++L  + N L+QLP+TIG  L
Sbjct: 217 NRLTFIPGFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLPETIG-SL 275

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  L S+  LD   N L++LP  +  L N+       N  Y
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNELEALPSSIGQLTNIRTFAADHN--Y 333

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q L
Sbjct: 334 LQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQL 393

Query: 200 SAV 202
           +A+
Sbjct: 394 TAM 396



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 110/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 VVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+S 
Sbjct: 235 LDISKNNI-----EMVEEGISG 251



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTA 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDISKNNIEMVEEGISGCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLVSIEELDCSFNEL 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  ++  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNIRTFAADHNYLQQLPPEI 341



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I    S+EEL+ +FN+L  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNELEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N++T + + N +  LP  +    ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 76/137 (55%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++ + L NV  L +  NQL  LP+SIG L  ++ LD S N LE+LP +I    ++ 
Sbjct: 267 QLPETIGS-LKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNELEALPSSIGQLTNIR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-SWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|3252981|gb|AAC40175.1| Ras-binding protein SUR-8 [Mus musculus]
          Length = 582

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 110/196 (56%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+   L  +  L ++SN+L+ LP  +GCL  L  L +S N L SLP +++N + L 
Sbjct: 114 ILPPSV-KELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLR 172

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKLR++P  + + L +L TL +  N+I  + + + +L  L +L  R N +K LP
Sbjct: 173 MLDLRHNKLREIPSVV-YRLDSLTTLYLRFNRITTVEKDIKNLPKLSMLSIRENKIKQLP 231

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG    +  LD+ +N +  LPD+IG L  L +L
Sbjct: 232 AEIGELCNLITLDVAHN--QLEHLPKEIGNCTQITNLDLQHNDLLDLPDTIGNLSSLNRL 289

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N L + P  + +
Sbjct: 290 GLRYNRLSAIPRSLAK 305



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 101/185 (54%), Gaps = 12/185 (6%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  +  L+   N L  LPD
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPD 278

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEVLN 133
           TIG  L +L  L +  N++  +P+SL   ++L  L+   N + +LPE  L +L+ L  L 
Sbjct: 279 TIG-NLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLT 337

Query: 134 ISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNPLV 188
           +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N L 
Sbjct: 338 LARNCFQL-----YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLT 392

Query: 189 SPPMD 193
           S P+D
Sbjct: 393 SLPLD 397



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 2/160 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           ++V L++ +NQL  +P  +  L  L+VL +S NLL+ LP  + N R L EL+   NKL  
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ I + L +L+ L +  N++  LP+ + HLT+L  L    N L  LPE++  L NLE 
Sbjct: 463 LPNEIAY-LKDLQKLVLTNNQLSTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEE 521

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           L ++ N   L +LP+ + L   L  + +    ++ LP  I
Sbjct: 522 LYLNDN-PNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 560



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 8/177 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 357 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  L +L  LR LD   N L+SLP ++  L +L
Sbjct: 415 TKIPEDVSG-LVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           + L ++ N   L TLP  IG L +L  L +  N +T LP+ IG L  L++L L  NP
Sbjct: 474 QKLVLTNN--QLSTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNP 528



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 108/230 (46%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N L  LP++IG LS L  L +  N L ++P+++  C +LEELN   N +  L
Sbjct: 263 ITNLDLQHNDLLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTL 322

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+++   L+ L +L++  NC                                        
Sbjct: 323 PESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLS 382

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N L  +PED+  L++LEVL +S N   L+ L
Sbjct: 383 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKL 440

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ +G L  L ELD+  NK+ +LP+ I  L+ LQKL L  N L + P  +
Sbjct: 441 PHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLSTLPRGI 490



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 97/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +PESL + L+ +  L +  N  +  P       S +  L++  N +  +P  I    + L
Sbjct: 322 LPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL 381

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP   G    ++  L++  N++  +P+ ++ L SL VL    N LK L
Sbjct: 382 SKLNMKDNQLTSLPLDFG-TWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  L NL  L  L++ +N   LE+LP  I  L  L +L ++ N+++TLP  IG L  L  
Sbjct: 441 PHGLGNLRKLRELDLEEN--KLESLPNEIAYLKDLQKLVLTNNQLSTLPRGIGHLTNLTH 498

Query: 180 LSLEGNPLVSPPMDV 194
           L L  N L   P ++
Sbjct: 499 LGLGENLLTHLPEEI 513



 Score = 44.7 bits (104), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L ++   I ILP S+  LT L  L    N L+SLP ++  L+NL  L +S+N   L +LP
Sbjct: 105 LDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLP 162

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            S+  L  L  LD+ +NK+  +P  +  L  L  L L  N + +   D+
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 211


>gi|441658612|ref|XP_004091272.1| PREDICTED: protein LAP2 [Nomascus leucogenys]
          Length = 1418

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 111/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+SA
Sbjct: 235 LDVSKNNI-----EMVEEGISA 251



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  L+  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 94/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+ E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 244 MVEEGISA-CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP +IG +L NL+T + + N +  LP  +    ++ VL    N L++LP
Sbjct: 303 ELDCSFNEVEALPSSIG-QLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402


>gi|221379722|ref|NP_732231.2| Sur-8, isoform A [Drosophila melanogaster]
 gi|221379725|ref|NP_650620.3| Sur-8, isoform B [Drosophila melanogaster]
 gi|442619579|ref|NP_001262664.1| Sur-8, isoform F [Drosophila melanogaster]
 gi|261277919|sp|Q9VEK6.3|SUR8_DROME RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|21711803|gb|AAM75092.1| RH55123p [Drosophila melanogaster]
 gi|220903112|gb|AAF55415.3| Sur-8, isoform A [Drosophila melanogaster]
 gi|220903113|gb|AAN13743.2| Sur-8, isoform B [Drosophila melanogaster]
 gi|440217531|gb|AGB96044.1| Sur-8, isoform F [Drosophila melanogaster]
          Length = 641

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 112/191 (58%), Gaps = 4/191 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP S     +++  L ++SN++  LP  IGCL  L+ L ++ N L SLP++++NC  L+
Sbjct: 174 VIP-STVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSLPESLQNCSQLK 232

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKL ++P  I + L +L TL +  N+I  +   L  L +L +L  R N ++ L 
Sbjct: 233 VLDLRHNKLAEIPPVI-YRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELG 291

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             +  L+NL  L++S N  +LE LP  IG  ++L  LD+ +N++  +PDSIG L+ L +L
Sbjct: 292 SAIGALVNLTTLDVSHN--HLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRL 349

Query: 181 SLEGNPLVSPP 191
            +  N L S P
Sbjct: 350 GMRYNRLSSVP 360



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 116/245 (47%), Gaps = 51/245 (20%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +    +N+  LD+  N+L  +P+SIG L  L  L +  N L S+P T++NC+S++E
Sbjct: 313 LPEDI-GNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPATLKNCKSMDE 371

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ------------SLTH------- 102
            N   N + QLPD +   L  L T++++ N+    P             +L H       
Sbjct: 372 FNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIP 431

Query: 103 -------------------LTSLRV----------LDARLNCLKSLPEDLENLINLEVLN 133
                              LT+L +          L+   N L+ LP+D+ NL NLE+L 
Sbjct: 432 YGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILI 491

Query: 134 ISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMD 193
           +S N   L+ +P +IG L  L  LD+  N+I  LP  IG L +LQ+L L+ N +   P  
Sbjct: 492 LSNNM--LKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPRS 549

Query: 194 VVEQG 198
           +   G
Sbjct: 550 IGHLG 554



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 97/161 (60%), Gaps = 2/161 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           +N+V L++ +N L+ LP+ I  L  L++L +S N+L+ +P TI N R L  L+   N++ 
Sbjct: 462 VNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIE 521

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG  L  L+ L +  N+I +LP+S+ HL +L  L    N L+ LPE++ +L +LE
Sbjct: 522 VLPHEIGL-LHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLE 580

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
            L I+QN   LE LP+ + L  +L  L++    ++T+P  I
Sbjct: 581 NLYINQN-PGLEKLPFELALCQNLKYLNIDKCPLSTIPPEI 620



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 26/179 (14%)

Query: 36  LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           +K LD+S + +  +P T++ C  L EL    NK+ QLP  IG  L++L+ L++N N +  
Sbjct: 162 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGC-LVSLRNLALNENSLTS 220

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLP-----------------------EDLENLINLEVL 132
           LP+SL + + L+VLD R N L  +P                       +DL  L+NL +L
Sbjct: 221 LPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTML 280

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           ++ +N   +  L  +IG L++L  LDVS+N +  LP+ IG    L  L L+ N L+  P
Sbjct: 281 SLREN--KIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIP 337



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 99/185 (53%), Gaps = 4/185 (2%)

Query: 3   PESLTARLLNVVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEE 61
           P    A+  NV  +++  N++  +P  I   +K L  L++  N+L +LP  I    ++ E
Sbjct: 407 PTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVE 466

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N L++LPD I   L NL+ L ++ N +  +P ++ +L  LR+LD   N ++ LP 
Sbjct: 467 LNLATNALQKLPDDI-MNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPH 525

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L  L+ L +  N   +  LP SIG L +L  L VS N +  LP+ IG L  L+ L 
Sbjct: 526 EIGLLHELQRLILQTN--QITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLY 583

Query: 182 LEGNP 186
           +  NP
Sbjct: 584 INQNP 588



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 103/188 (54%), Gaps = 4/188 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L+N+ +L +  N+++ L ++IG L  L  LDVS N LE LP+ I NC +L  L+   N+
Sbjct: 273 QLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNE 332

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLI 127
           L  +PD+IG  L +L  L +  N++  +P +L +  S+   +   N +  LP+  L +L 
Sbjct: 333 LLDIPDSIG-NLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLS 391

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNP 186
            L  + +S+N Q+            ++  +++ +N+I  +P  I    K L KL+++ N 
Sbjct: 392 GLTTITLSRN-QFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENM 450

Query: 187 LVSPPMDV 194
           L + P+D+
Sbjct: 451 LTALPLDI 458



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +P+ + A L  +  + +  NQ    P       + +  +++  N ++ +P  I    + L
Sbjct: 382 LPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGL 441

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N L  LP  IG   +N+  L++  N +  LP  + +L +L +L    N LK +
Sbjct: 442 TKLNMKENMLTALPLDIG-TWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKI 500

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  + NL  L +L++ +N   +E LP+ IGLL  L  L +  N+IT LP SIG L  L  
Sbjct: 501 PNTIGNLRKLRILDLEEN--RIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTH 558

Query: 180 LSLEGNPLVSPPMDV 194
           LS+  N L   P ++
Sbjct: 559 LSVSENNLQFLPEEI 573



 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 28/146 (19%)

Query: 51  KTIENCR--SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRV 108
           K ++ CR   ++ L+ + + +  +P T+  E ++L  L +  NKI  LP  +  L SLR 
Sbjct: 152 KALQRCRDEGIKRLDLSKSSITVIPSTVK-ECVHLTELYLYSNKIGQLPPEIGCLVSLRN 210

Query: 109 LDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           L    N L SLPE L+N   L+VL                         D+ +NK+  +P
Sbjct: 211 LALNENSLTSLPESLQNCSQLKVL-------------------------DLRHNKLAEIP 245

Query: 169 DSIGCLRKLQKLSLEGNPLVSPPMDV 194
             I  LR L  L L  N + +   D+
Sbjct: 246 PVIYRLRSLTTLYLRFNRITAVADDL 271


>gi|455790645|gb|EMF42500.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 230

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/168 (41%), Positives = 98/168 (58%), Gaps = 3/168 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L+N+  L++  N+L  LP  IG L  LK+LD++ N + + PK     ++LE L  N N
Sbjct: 66  GQLVNLERLNLRDNKLTNLPEEIGELENLKILDITRNKISTFPKEFWKLKNLEVLLLNGN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP+ IG EL NLK L I  NKI   P+    L +L VL    N L +LPE++  L 
Sbjct: 126 SLSNLPEEIG-ELENLKILDITRNKISTFPKEFWKLKNLEVLLLNGNSLSNLPEEIGELE 184

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLR 175
            L +L ++ N   L TLP  IG L +LV L +S NK+T++PD +G L+
Sbjct: 185 KLGILYLNNN--QLTTLPKEIGQLENLVSLSLSSNKLTSIPDELGQLK 230



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 98/179 (54%), Gaps = 3/179 (1%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           V +LD+   QL  LP  IG L  L+ L++  N L +LP+ I    +L+ L+   NK+   
Sbjct: 48  VRILDLSRKQLTTLPKEIGQLVNLERLNLRDNKLTNLPEEIGELENLKILDITRNKISTF 107

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P    ++L NL+ L +N N +  LP+ +  L +L++LD   N + + P++   L NLEVL
Sbjct: 108 PKEF-WKLKNLEVLLLNGNSLSNLPEEIGELENLKILDITRNKISTFPKEFWKLKNLEVL 166

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            ++ N   L  LP  IG L  L  L ++ N++TTLP  IG L  L  LSL  N L S P
Sbjct: 167 LLNGN--SLSNLPEEIGELEKLGILYLNNNQLTTLPKEIGQLENLVSLSLSSNKLTSIP 223



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/161 (39%), Positives = 92/161 (57%), Gaps = 3/161 (1%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           +++++LD+S   L +LPK I    +LE LN   NKL  LP+ IG EL NLK L I  NKI
Sbjct: 46  NEVRILDLSRKQLTTLPKEIGQLVNLERLNLRDNKLTNLPEEIG-ELENLKILDITRNKI 104

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
              P+    L +L VL    N L +LPE++  L NL++L+I++N   + T P     L +
Sbjct: 105 STFPKEFWKLKNLEVLLLNGNSLSNLPEEIGELENLKILDITRN--KISTFPKEFWKLKN 162

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L  L ++ N ++ LP+ IG L KL  L L  N L + P ++
Sbjct: 163 LEVLLLNGNSLSNLPEEIGELEKLGILYLNNNQLTTLPKEI 203


>gi|329664482|ref|NP_001192398.1| leucine-rich repeat-containing protein 1 [Bos taurus]
 gi|296474603|tpg|DAA16718.1| TPA: PDZ-domain protein scribble-like [Bos taurus]
          Length = 524

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 111/193 (57%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 120 LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 179 LDLGNNEIYNLPESIG-ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPE 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L  L ISQN   LE LP  IG L  L  L V  N++T LP+++G    L +L 
Sbjct: 238 EISGLTSLTDLVISQNL--LEMLPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELV 295

Query: 182 LEGNPLVSPPMDV 194
           L  N L++ P  +
Sbjct: 296 LTENRLLTLPKSI 308



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 103/187 (55%), Gaps = 5/187 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           AR L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L EL+ + N
Sbjct: 35  ARSLEELLLD--ANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRN 92

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            + ++P++I F    L+    + N +  LP+S   L +L  L      L+SLPE++ NL 
Sbjct: 93  DIPEIPESISF-CKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLY 151

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L + +N   L  LP S+  L  L ELD+  N+I  LP+SIG L  L+ L L+GN L
Sbjct: 152 NLASLELRENL--LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQL 209

Query: 188 VSPPMDV 194
              P ++
Sbjct: 210 SELPQEI 216



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 87/250 (34%), Positives = 119/250 (47%), Gaps = 32/250 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP++    ++L  L+ N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDI 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD--------------ARL 113
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD              A L
Sbjct: 139 SLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALL 197

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L  LP+++ NL NL  L++S+N   LE LP  I  L SL +L +S N +
Sbjct: 198 HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN--RLERLPEEISGLTSLTDLVISQNLL 255

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVG 224
             LPD IG L+KL  L ++ N L   P + V    S  +  L+E  N     PK    +G
Sbjct: 256 EMLPDGIGKLKKLSILKVDQNRLTQLP-EAVGDCESLTELVLTE--NRLLTLPKS---IG 309

Query: 225 KLVKYGTFNG 234
           KL K    N 
Sbjct: 310 KLKKLSNLNA 319



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 113/225 (50%), Gaps = 11/225 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+ A LL++  L +  NQL  LP  IG L  L  LDVS N LE LP+ I    SL +
Sbjct: 189 LPESIGA-LLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTD 247

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L  LPD IG +L  L  L ++ N++  LP+++    SL  L    N L +LP+
Sbjct: 248 LVISQNLLEMLPDGIG-KLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPK 306

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L  L  LN  +N   L +LP  IG   SL    V  N++T +P  +    +L  L 
Sbjct: 307 SIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSRAAELHVLD 364

Query: 182 LEGNPLVSPPMDVVEQGLSAV-------KGYLSEKMNNDHKSPKK 219
           + GN L   P+ +    L A+       +  L+ + + DH + +K
Sbjct: 365 VAGNRLSHLPLSLTALNLKALWLSDNQAQPLLTFQTDTDHTTGEK 409



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 2/138 (1%)

Query: 57  RSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
           R +E ++     L  +PD +     +L+ L ++ N++  LP+    L  LR L    N +
Sbjct: 12  RHVETIDRRHCSLLYVPDEVYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + LP ++ N + L  L++S+N   +  +P SI    +L   D S N +T LP+S   L+ 
Sbjct: 72  QRLPPEIANFMQLVELDVSRN--DIPEIPESISFCKALQIADFSGNPLTRLPESFPELQN 129

Query: 177 LQKLSLEGNPLVSPPMDV 194
           L  LS+    L S P ++
Sbjct: 130 LTCLSVNDISLQSLPENI 147


>gi|92097612|gb|AAI15016.1| ERBB2IP protein [Homo sapiens]
          Length = 1367

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 104/186 (55%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RL  + +L++  NQLK LP ++  L++L+ LD+  N    +P+ +E    L+E   + N+
Sbjct: 159 RLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANR 218

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  +P  IG  L  L  L ++ N I ++ + ++   +L+ L    N L+ LPE + +L N
Sbjct: 219 LTFIPGFIG-SLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           +  L I +N   L  LP SIG L+S+ ELD S+N++  LP SIG L  L+  + + N L 
Sbjct: 278 ITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 189 SPPMDV 194
             P ++
Sbjct: 336 QLPPEI 341



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 110/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFDRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+S 
Sbjct: 235 LDVSKNNI-----EMVEEGIST 251



 Score = 81.6 bits (200), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 104/194 (53%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP +   L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFDRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I    S+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+T + + N +  LP  +    ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++ + L N+  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    +L 
Sbjct: 267 QLPETIGS-LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-SWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|358679323|ref|NP_001240630.1| protein LAP2 isoform 9 [Homo sapiens]
          Length = 1367

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 110/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+S 
Sbjct: 235 LDVSKNNI-----EMVEEGIST 251



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  L+  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 80.5 bits (197), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I    S+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+T + + N +  LP  +    ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++ + L N+  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    +L 
Sbjct: 267 QLPETIGS-LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-SWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|332233712|ref|XP_003266047.1| PREDICTED: protein LAP2 isoform 2 [Nomascus leucogenys]
          Length = 1301

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 106/187 (56%), Gaps = 10/187 (5%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L  + A+ N + +LPD 
Sbjct: 74  LSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPD- 132

Query: 76  IGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            GF +L+NL  L +N   +  LP +   LT L++L+ R N LK LP+ +  L  LE L++
Sbjct: 133 -GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDL 191

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N ++ E +P  +  L  L E  +  N++T +P  IG L++L  L +  N +     ++
Sbjct: 192 GSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EM 244

Query: 195 VEQGLSA 201
           VE+G+SA
Sbjct: 245 VEEGISA 251



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  L+  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 94/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+ E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 244 MVEEGISA-CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP +IG +L NL+T + + N +  LP  +    ++ VL    N L++LP
Sbjct: 303 ELDCSFNEVEALPSSIG-QLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402


>gi|403267429|ref|XP_003925835.1| PREDICTED: protein LAP2 isoform 1 [Saimiri boliviensis boliviensis]
          Length = 1371

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGL- 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGELTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 111/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 VVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+SA
Sbjct: 235 LDVSKNNI-----EMVEEGISA 251



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 116/215 (53%), Gaps = 5/215 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD   N ++ + E +    
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACE 253

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +S N   L+ LP +IGLL ++  L +  N++  LPDSIG L  +++L    N +
Sbjct: 254 NLQDLLLSSN--SLQQLPETIGLLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 188 VSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSW 222
            + P  + E  L+ ++ + ++        P+  SW
Sbjct: 312 EALPSSIGE--LTNLRTFAADHNYLQQLPPEIGSW 344



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFNFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/163 (34%), Positives = 94/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+ E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 244 MVEEGISA-CENLQDLLLSSNSLQQLPETIGLLKNITTLKIDENQLMYLPDSIGGLISVE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP +IG EL NL+T + + N +  LP  +    ++ VL    N L++LP
Sbjct: 303 ELDCSFNEVEALPSSIG-ELTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402


>gi|410959449|ref|XP_003986321.1| PREDICTED: leucine-rich repeat-containing protein 1 [Felis catus]
          Length = 544

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/214 (36%), Positives = 116/214 (54%), Gaps = 23/214 (10%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 140 LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 198

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 199 LDLGNNEIYNLPESIG-ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPE 257

Query: 122 DLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELDVS 160
           ++  L +L  L ISQN                        L  LP ++G   SL EL ++
Sbjct: 258 EISGLTSLTDLVISQNLLEMIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLT 317

Query: 161 YNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N++ TLP SIG L+KL  L+ + N LVS P ++
Sbjct: 318 ENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI 351



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 107/195 (54%), Gaps = 7/195 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   AR L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L
Sbjct: 47  VPEEIYRYARSLEELLLD--ANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQL 104

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP+S   L +L  L      L+SL
Sbjct: 105 VELDVSRNDIPEIPESISF-CKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 163

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++ NL NL  L + +N   L  LP S+  L  L ELD+  N+I  LP+SIG L  L+ 
Sbjct: 164 PENIGNLYNLASLELRENL--LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKD 221

Query: 180 LSLEGNPLVSPPMDV 194
           L L+GN L   P ++
Sbjct: 222 LWLDGNQLSELPQEI 236



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 104/210 (49%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP++    ++L  L+ N  
Sbjct: 99  ANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDI 158

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD--------------ARL 113
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD              A L
Sbjct: 159 SLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALL 217

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L  LP+++ NL NL  L++S+N   LE LP  I  L SL +L +S N +
Sbjct: 218 HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN--RLERLPEEISGLTSLTDLVISQNLL 275

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +PD IG L+KL  L ++ N L   P  V
Sbjct: 276 EMIPDGIGKLKKLSILKVDQNRLTQLPEAV 305



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 114/225 (50%), Gaps = 11/225 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+ A LL++  L +  NQL  LP  IG L  L  LDVS N LE LP+ I    SL +
Sbjct: 209 LPESIGA-LLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTD 267

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L  +PD IG +L  L  L ++ N++  LP+++    SL  L    N L +LP+
Sbjct: 268 LVISQNLLEMIPDGIG-KLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPK 326

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L  L  LN  +N   L +LP  IG   SL    V  N++T +P  +    +L  L 
Sbjct: 327 SIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLD 384

Query: 182 LEGNPLVSPPMDVVEQGLSAV-------KGYLSEKMNNDHKSPKK 219
           + GN L+  P+ +    L A+       +  L+ + + DH + +K
Sbjct: 385 VAGNRLLHLPLSLTALKLKALWLSDNQSQPLLTFQTDTDHATGEK 429



 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 2/103 (1%)

Query: 89  NCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSI 148
           +C+ + +  +   +  SL  L    N L+ LPE    L+ L  L +S N   ++ LP  I
Sbjct: 41  HCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDN--EIQRLPPEI 98

Query: 149 GLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
              M LVELDVS N I  +P+SI   + LQ     GNPL   P
Sbjct: 99  ANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLP 141


>gi|418731390|ref|ZP_13289789.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410773922|gb|EKR53943.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 315

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 102/183 (55%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V  LD+ +  L  L   IG L  L+ L++  N L +LP+ I   R+L+ L  +FN+   
Sbjct: 54  DVRQLDLAAKGLTTLLKEIGKLRNLQKLNLGSNRLTTLPEEIAQLRNLQRLQLSFNQFTT 113

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  I ++L NL+ L +N N++  LP+ +     L+ L    N L +LP+++  L NLE+
Sbjct: 114 LPKEI-WQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLRLDNNQLANLPQEITQLQNLEL 172

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +S N   L TLP  I  L SL  L V  N+ TT P+ I  L+KLQ L L GN L + P
Sbjct: 173 LFLSGN--RLTTLPEEIAQLRSLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLP 230

Query: 192 MDV 194
            ++
Sbjct: 231 KEI 233



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 110/199 (55%), Gaps = 3/199 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  LD++ N+L  LP  I    KL+ L +  N L +LP+ I   ++LE L  + N+
Sbjct: 120 QLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLRLDNNQLANLPQEITQLQNLELLFLSGNR 179

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP+ I  +L +L+ L +  N+    P+ +T L  L+ LD   N L +LP+++  L N
Sbjct: 180 LTTLPEEIA-QLRSLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQN 238

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L++  N   L  LP  I  L +L  L +S N++TTLP  IG L+ LQ L L+GNP+V
Sbjct: 239 LKALHLGGN--QLAILPEEITQLQNLQTLILSGNQLTTLPKEIGRLQNLQTLILKGNPIV 296

Query: 189 SPPMDVVEQGLSAVKGYLS 207
           S     ++Q L     Y  
Sbjct: 297 SKERQRIQQLLPKCTIYFE 315



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/189 (35%), Positives = 104/189 (55%), Gaps = 3/189 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++ SN+L  LP  I  L  L+ L +S N   +LPK I   ++L+ L+ N N
Sbjct: 73  GKLRNLQKLNLGSNRLTTLPEEIAQLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDN 132

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ I  +   L+ L ++ N++  LPQ +T L +L +L    N L +LPE++  L 
Sbjct: 133 RLTTLPEEIA-QFQKLQWLRLDNNQLANLPQEITQLQNLELLFLSGNRLTTLPEEIAQLR 191

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L +  N     T P  I  L  L  LD+  N++TTLP  IG L+ L+ L L GN L
Sbjct: 192 SLQRLYVYGN--RFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQL 249

Query: 188 VSPPMDVVE 196
              P ++ +
Sbjct: 250 AILPEEITQ 258



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 105/193 (54%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE + A+L N+  L +  NQ   LP  I  L  L+ LD++ N L +LP+ I   + L+ 
Sbjct: 91  LPEEI-AQLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQW 149

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+L  LP  I  +L NL+ L ++ N++  LP+ +  L SL+ L    N   + PE
Sbjct: 150 LRLDNNQLANLPQEIT-QLQNLELLFLSGNRLTTLPEEIAQLRSLQRLYVYGNRFTTFPE 208

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L  L+ L++  N   L TLP  IG L +L  L +  N++  LP+ I  L+ LQ L 
Sbjct: 209 EITQLQKLQGLDLGGN--QLTTLPKEIGRLQNLKALHLGGNQLAILPEEITQLQNLQTLI 266

Query: 182 LEGNPLVSPPMDV 194
           L GN L + P ++
Sbjct: 267 LSGNQLTTLPKEI 279



 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 65/115 (56%), Gaps = 2/115 (1%)

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           +++ L +    +  L + +  L +L+ L+   N L +LPE++  L NL+ L +S  F   
Sbjct: 54  DVRQLDLAAKGLTTLLKEIGKLRNLQKLNLGSNRLTTLPEEIAQLRNLQRLQLS--FNQF 111

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
            TLP  I  L +L  LD++ N++TTLP+ I   +KLQ L L+ N L + P ++ +
Sbjct: 112 TTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLRLDNNQLANLPQEITQ 166



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 65/108 (60%), Gaps = 2/108 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE + A+L ++  L V+ N+    P  I  L KL+ LD+ GN L +LPK I   ++L+ 
Sbjct: 183 LPEEI-AQLRSLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKA 241

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           L+   N+L  LP+ I  +L NL+TL ++ N++  LP+ +  L +L+ L
Sbjct: 242 LHLGGNQLAILPEEIT-QLQNLQTLILSGNQLTTLPKEIGRLQNLQTL 288



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 2/93 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
            PE +T +L  +  LD+  NQL  LP  IG L  LK L + GN L  LP+ I   ++L+ 
Sbjct: 206 FPEEIT-QLQKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAILPEEITQLQNLQT 264

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
           L  + N+L  LP  IG  L NL+TL +  N IV
Sbjct: 265 LILSGNQLTTLPKEIG-RLQNLQTLILKGNPIV 296


>gi|410354913|gb|JAA44060.1| erbb2 interacting protein [Pan troglodytes]
          Length = 1367

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 110/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+S 
Sbjct: 235 LDVSKNNI-----EMVEEGIST 251



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  L+  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I    S+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+T + + N +  LP  +    ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++ + L N+  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    +L 
Sbjct: 267 QLPETIGS-LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-SWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|417402294|gb|JAA47999.1| Putative leucine-rich repeat-containing protein 1 [Desmodus
           rotundus]
          Length = 524

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 111/193 (57%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 120 LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 179 LDLGNNEIYNLPESIG-ALLHLKDLWLDGNQLSELPQEIGNLQNLLCLDVSENKLERLPE 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L  L ISQN   LET+P  IG L  L  L V  N++T LP+++G    L +L 
Sbjct: 238 EISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLTQLPETVGDCESLTELV 295

Query: 182 LEGNPLVSPPMDV 194
           L  N L + P  +
Sbjct: 296 LTENRLPALPKSI 308



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/250 (33%), Positives = 120/250 (48%), Gaps = 32/250 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP++    ++L  L+ N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDI 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD--------------ARL 113
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD              A L
Sbjct: 139 SLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALL 197

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L  LP+++ NL NL  L++S+N   LE LP  I  L SL +L +S N +
Sbjct: 198 HLKDLWLDGNQLSELPQEIGNLQNLLCLDVSEN--KLERLPEEISGLTSLTDLVISQNLL 255

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVG 224
            T+PD IG L+KL  L ++ N L   P  V +         L+E +  +++ P     +G
Sbjct: 256 ETIPDGIGKLKKLSILKVDQNRLTQLPETVGD------CESLTELVLTENRLPALPKSIG 309

Query: 225 KLVKYGTFNG 234
           KL K    N 
Sbjct: 310 KLKKLSNLNA 319



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 107/195 (54%), Gaps = 7/195 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   AR L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L
Sbjct: 27  VPEEIYRYARSLEELLLD--ANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP+S   L +L  L      L+SL
Sbjct: 85  VELDVSRNDIPEIPESISF-CKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++ NL NL  L + +N   L  LP S+  L  L ELD+  N+I  LP+SIG L  L+ 
Sbjct: 144 PENIGNLYNLASLELRENL--LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKD 201

Query: 180 LSLEGNPLVSPPMDV 194
           L L+GN L   P ++
Sbjct: 202 LWLDGNQLSELPQEI 216



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 108/207 (52%), Gaps = 6/207 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+ A LL++  L +  NQL  LP  IG L  L  LDVS N LE LP+ I    SL +
Sbjct: 189 LPESIGA-LLHLKDLWLDGNQLSELPQEIGNLQNLLCLDVSENKLERLPEEISGLTSLTD 247

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L  +PD IG +L  L  L ++ N++  LP+++    SL  L    N L +LP+
Sbjct: 248 LVISQNLLETIPDGIG-KLKKLSILKVDQNRLTQLPETVGDCESLTELVLTENRLPALPK 306

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L  L  LN  +N   L +LP  IG   SL    V  N++T +P  +    +L  L 
Sbjct: 307 SIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLD 364

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSE 208
           + GN L+  P+ +    L A+  +LS+
Sbjct: 365 VAGNRLLHLPLSLTALKLKAL--WLSD 389



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 96/176 (54%), Gaps = 4/176 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N++ LDV  N+L+ LP  I  L+ L  L +S NLLE++P  I   + L  L  + N+L
Sbjct: 219 LQNLLCLDVSENKLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRL 278

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            QLP+T+G +  +L  L +  N++  LP+S+  L  L  L+A  N L SLP+++    +L
Sbjct: 279 TQLPETVG-DCESLTELVLTENRLPALPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSL 337

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            V  +  N   L  +P  +     L  LDV+ N++  LP S+  L KL+ L L  N
Sbjct: 338 TVFCVRDN--RLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTAL-KLKALWLSDN 390



 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 2/138 (1%)

Query: 57  RSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
           R +E ++     L  +P+ I     +L+ L ++ N++  LP+    L  LR L    N +
Sbjct: 12  RHVETIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + LP ++ N + L  L++S+N   +  +P SI    +L   D S N +T LP+S   L+ 
Sbjct: 72  QRLPPEIANFMQLVELDVSRN--DIPEIPESISFCKALQIADFSGNPLTRLPESFPELQN 129

Query: 177 LQKLSLEGNPLVSPPMDV 194
           L  LS+    L S P ++
Sbjct: 130 LTCLSVNDISLQSLPENI 147


>gi|194388158|dbj|BAG65463.1| unnamed protein product [Homo sapiens]
          Length = 1346

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 110/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+S 
Sbjct: 235 LDVSKNNI-----EMVEEGIST 251



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  L+  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I    S+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+T + + N +  LP  +    ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++   L N+  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    +L 
Sbjct: 267 QLPETI-GSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-SWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|300798683|ref|NP_001178314.1| leucine-rich repeat and IQ domain-containing protein 4 [Bos taurus]
          Length = 569

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 112/225 (49%), Gaps = 30/225 (13%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN-- 67
           L N+ VL +  N++  LP+  G LSKLK+L ++GN   S PK I +  SLE+L    +  
Sbjct: 324 LKNLEVLALDDNKICQLPSDFGSLSKLKILGLTGNQFSSFPKEILSLASLEKLYIGQDEG 383

Query: 68  -KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENL 126
            KL  LP+ I   L NLK L I  N +  LP SL  + +L +LD   N +K LP+     
Sbjct: 384 AKLTHLPECIK-RLQNLKELYIENNHLEYLPVSLGSMPNLEILDCHCNLIKQLPD----- 437

Query: 127 INLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
                               +I    +L EL    N IT LP+++  L  L+ L+L GNP
Sbjct: 438 --------------------AICQAQALKELRFEDNLITYLPENLDSLVNLEVLTLTGNP 477

Query: 187 LVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWV-GKLVKYG 230
           +  PPM V  +G  AV  YL E+ N    + K ++W  G +V+ G
Sbjct: 478 MEEPPMSVCAKGTEAVWEYLRERRNMKELATKIQAWWRGMMVRKG 522



 Score = 38.1 bits (87), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 3/137 (2%)

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           ++A+   L  +P+ I   L  L+ + +  N I  +P+ + HL  +RVL    N LK+L  
Sbjct: 30  IDASNQSLLTIPEDI-LALRELEEVHLENNLIAEIPKDIQHLRKIRVLYLNKNKLKNLCP 88

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI-GCLRKLQKL 180
           ++  L NLE L++S N     +LP   G +  L EL +    +  +P  I   L  L+ L
Sbjct: 89  EMGRLSNLEGLDLSDNPLEASSLPVLSG-IRQLRELRLYRTDLADIPVVICKLLHHLELL 147

Query: 181 SLEGNPLVSPPMDVVEQ 197
            L GN L S P ++V Q
Sbjct: 148 GLAGNHLKSLPKEIVNQ 164


>gi|358679311|ref|NP_001240626.1| protein LAP2 isoform 1 [Homo sapiens]
 gi|116242614|sp|Q96RT1.2|LAP2_HUMAN RecName: Full=Protein LAP2; AltName: Full=Densin-180-like protein;
           AltName: Full=Erbb2-interacting protein; Short=Erbin
 gi|119571720|gb|EAW51335.1| erbb2 interacting protein, isoform CRA_d [Homo sapiens]
          Length = 1412

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 110/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+S 
Sbjct: 235 LDVSKNNI-----EMVEEGIST 251



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  L+  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I    S+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+T + + N +  LP  +    ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++ + L N+  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    +L 
Sbjct: 267 QLPETIGS-LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-SWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|14582259|gb|AAK69431.1| densin-180-like protein [Homo sapiens]
          Length = 1412

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 110/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+S 
Sbjct: 235 LDVSKNNI-----EMVEEGIST 251



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  L+  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 80.5 bits (197), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I    S+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+T + + N +  LP  +    ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++ + L N+  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    +L 
Sbjct: 267 QLPETIGS-LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-SWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|326916406|ref|XP_003204498.1| PREDICTED: hypothetical protein LOC100543557 [Meleagris gallopavo]
          Length = 1033

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/186 (40%), Positives = 105/186 (56%), Gaps = 4/186 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP+++   + LEE
Sbjct: 629 LPESF-PELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQRLEE 687

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+L  LP+TIG  L NLK L ++ N++  +PQ + +L +L  LD   N L+ LPE
Sbjct: 688 LDLGNNELYHLPETIGA-LFNLKDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLECLPE 746

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L  L +SQN   L+ LP  IG L  L  L V  NK+  L DSIG    L +L 
Sbjct: 747 EINGLTSLTDLLVSQNL--LQVLPDGIGKLRKLSILKVDQNKLIQLTDSIGDCESLTELV 804

Query: 182 LEGNPL 187
           L  N L
Sbjct: 805 LTENQL 810



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 101/204 (49%), Gaps = 26/204 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LD+  N +  +P SI     L+V D SGN L  LP++    ++L  L+ N  
Sbjct: 588 ANFMQLVELDLSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDI 647

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE------ 121
            L+ LP+ IG  L NL +L +  N +  LP+SL  L  L  LD   N L  LPE      
Sbjct: 648 SLQALPENIG-NLYNLASLELRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGALF 706

Query: 122 -----------------DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                            ++ NL NL  L++S+N   LE LP  I  L SL +L VS N +
Sbjct: 707 NLKDLWLDGNQLAEIPQEVGNLKNLLCLDVSEN--KLECLPEEINGLTSLTDLLVSQNLL 764

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLV 188
             LPD IG LRKL  L ++ N L+
Sbjct: 765 QVLPDGIGKLRKLSILKVDQNKLI 788



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 102/184 (55%), Gaps = 5/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +   L N++ LDV  N+L+CLP  I  L+ L  L VS NLL+ LP  I   R L  
Sbjct: 721 IPQEV-GNLKNLLCLDVSENKLECLPEEINGLTSLTDLLVSQNLLQVLPDGIGKLRKLSI 779

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + NKL QL D+IG +  +L  L +  N++ ILP+S+  L  L  L+A  N L SLP+
Sbjct: 780 LKVDQNKLIQLTDSIG-DCESLTELVLTENQLQILPKSIGKLKKLNNLNADRNKLISLPK 838

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++    +L V ++  N   L  +P  I     L  LDV+ N++T LP S+  L KL+ L 
Sbjct: 839 EIGGCCSLNVFSVRDN--RLSRIPSEISQATELHVLDVAGNRLTYLPFSLTTL-KLKALW 895

Query: 182 LEGN 185
           L  N
Sbjct: 896 LSDN 899



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 109/198 (55%), Gaps = 5/198 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L+ +  L +  N+++ LP  I    +L  LD+S N +  +P++I  C++L+  + + N 
Sbjct: 566 QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKALQVADFSGNP 625

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L +LP++   EL NL  LS+N   +  LP+++ +L +L  L+ R N L  LPE L  L  
Sbjct: 626 LTRLPESFP-ELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQR 684

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           LE L++  N  Y   LP +IG L +L +L +  N++  +P  +G L+ L  L +  N L 
Sbjct: 685 LEELDLGNNELY--HLPETIGALFNLKDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLE 742

Query: 189 SPPMDVVEQGLSAVKGYL 206
             P ++   GL+++   L
Sbjct: 743 CLPEEI--NGLTSLTDLL 758



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 48/167 (28%)

Query: 74  DTIGFELINLKTLSINCNKIVIL-----------------------PQSLTHLTSLRVLD 110
           D   F+L+ L+ L ++ N+I  L                       P+S++   +L+V D
Sbjct: 561 DQPFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKALQVAD 620

Query: 111 ----------------ARLNC-------LKSLPEDLENLINLEVLNISQNFQYLETLPYS 147
                             L C       L++LPE++ NL NL  L + +N   L  LP S
Sbjct: 621 FSGNPLTRLPESFPELQNLTCLSVNDISLQALPENIGNLYNLASLELRENL--LTYLPES 678

Query: 148 IGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +  L  L ELD+  N++  LP++IG L  L+ L L+GN L   P +V
Sbjct: 679 LAQLQRLEELDLGNNELYHLPETIGALFNLKDLWLDGNQLAEIPQEV 725


>gi|426250981|ref|XP_004019210.1| PREDICTED: leucine-rich repeat-containing protein 1 [Ovis aries]
          Length = 473

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 111/193 (57%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 69  LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 127

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 128 LDLGNNEIYNLPESIG-ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPE 186

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L  L ISQN   LE LP  IG L  L  L V  N++T LP+++G    L +L 
Sbjct: 187 EISGLTSLTDLVISQNL--LEMLPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELV 244

Query: 182 LEGNPLVSPPMDV 194
           L  N L++ P  +
Sbjct: 245 LTENRLLTLPKSI 257



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 104/210 (49%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP++    ++L  L+ N  
Sbjct: 28  ANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDI 87

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD--------------ARL 113
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD              A L
Sbjct: 88  SLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALL 146

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L  LP+++ NL NL  L++S+N   LE LP  I  L SL +L +S N +
Sbjct: 147 HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN--RLERLPEEISGLTSLTDLVISQNLL 204

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LPD IG L+KL  L ++ N L   P  V
Sbjct: 205 EMLPDGIGKLKKLSILKVDQNRLTQLPEAV 234



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 113/225 (50%), Gaps = 11/225 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+ A LL++  L +  NQL  LP  IG L  L  LDVS N LE LP+ I    SL +
Sbjct: 138 LPESIGA-LLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTD 196

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L  LPD IG +L  L  L ++ N++  LP+++    SL  L    N L +LP+
Sbjct: 197 LVISQNLLEMLPDGIG-KLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPK 255

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L  L  LN  +N   L +LP  IG   SL    V  N++T +P  +    +L  L 
Sbjct: 256 SIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSRAAELHVLD 313

Query: 182 LEGNPLVSPPMDVVEQGLSAV-------KGYLSEKMNNDHKSPKK 219
           + GN L   P+ +    L A+       +  L+ + + DH + +K
Sbjct: 314 VAGNRLSHLPLSLTALNLKALWLSDNQAQPLLTFQTDTDHTTGEK 358



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 109/194 (56%), Gaps = 5/194 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L+ +  L +  N+++ LP  I    +L  LDVS N +  +P++I  C++L+  + + N 
Sbjct: 6   QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNP 65

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L +LP++   EL NL  LS+N   +  LP+++ +L +L  L+ R N L  LP+ L  L  
Sbjct: 66  LTRLPESFP-ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRR 124

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           LE L++  N  Y   LP SIG L+ L +L +  N+++ LP  IG L+ L  L +  N L 
Sbjct: 125 LEELDLGNNEIY--NLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLE 182

Query: 189 SPPMDVVEQGLSAV 202
             P ++   GL+++
Sbjct: 183 RLPEEI--SGLTSL 194



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 25/140 (17%)

Query: 78  FELINLKTLSINCNKIVIL-----------------------PQSLTHLTSLRVLDARLN 114
           F+L+ L+ L ++ N+I  L                       P+S++   +L++ D   N
Sbjct: 5   FQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGN 64

Query: 115 CLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCL 174
            L  LPE    L NL  L++  N   L++LP +IG L +L  L++  N +T LPDS+  L
Sbjct: 65  PLTRLPESFPELQNLTCLSV--NDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQL 122

Query: 175 RKLQKLSLEGNPLVSPPMDV 194
           R+L++L L  N + + P  +
Sbjct: 123 RRLEELDLGNNEIYNLPESI 142


>gi|329663814|ref|NP_001193082.1| protein LAP2 [Bos taurus]
 gi|296475860|tpg|DAA17975.1| TPA: erbb2 interacting protein isoform 1 [Bos taurus]
          Length = 1372

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 106/183 (57%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LD+S N +E + + I  C +L++L  + N L+QLP+TIG  L
Sbjct: 217 NRLTFIPGFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLPETIG-SL 275

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  L S+  LD   N L++LP  +  L N+       N  Y
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNELEALPSSIGQLTNIRTFAADHN--Y 333

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q L
Sbjct: 334 LQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQL 393

Query: 200 SAV 202
           +A+
Sbjct: 394 TAM 396



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 110/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 VVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+S 
Sbjct: 235 LDISKNNI-----EMVEEGISG 251



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTA 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDISKNNIEMVEEGISGCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLVSIEELDCSFNEL 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  ++  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNIRTFAADHNYLQQLPPEI 341



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I    S+EEL+ +FN+L  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNELEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N++T + + N +  LP  +    ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 76/137 (55%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++ + L NV  L +  NQL  LP+SIG L  ++ LD S N LE+LP +I    ++ 
Sbjct: 267 QLPETIGS-LKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNELEALPSSIGQLTNIR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-SWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|114599985|ref|XP_001162761.1| PREDICTED: protein LAP2 isoform 3 [Pan troglodytes]
 gi|397514427|ref|XP_003827489.1| PREDICTED: protein LAP2 isoform 2 [Pan paniscus]
          Length = 1412

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 110/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+S 
Sbjct: 235 LDVSKNNI-----EMVEEGIST 251



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  L+  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I    S+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+T + + N +  LP  +    ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++   L N+  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    +L 
Sbjct: 267 QLPETI-GSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-SWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|332233716|ref|XP_003266049.1| PREDICTED: protein LAP2 isoform 4 [Nomascus leucogenys]
          Length = 1345

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 106/187 (56%), Gaps = 10/187 (5%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L  + A+ N + +LPD 
Sbjct: 74  LSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPD- 132

Query: 76  IGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            GF +L+NL  L +N   +  LP +   LT L++L+ R N LK LP+ +  L  LE L++
Sbjct: 133 -GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDL 191

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N ++ E +P  +  L  L E  +  N++T +P  IG L++L  L +  N +     ++
Sbjct: 192 GSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EM 244

Query: 195 VEQGLSA 201
           VE+G+SA
Sbjct: 245 VEEGISA 251



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  L+  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 94/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+ E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 244 MVEEGISA-CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP +IG +L NL+T + + N +  LP  +    ++ VL    N L++LP
Sbjct: 303 ELDCSFNEVEALPSSIG-QLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402


>gi|418693182|ref|ZP_13254245.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|418723760|ref|ZP_13282594.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|400356840|gb|EJP12998.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|409962558|gb|EKO26292.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 315

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 102/183 (55%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V  LD+ +  L  L   IG L  L+ L++  N L +LP+ I   R+L+ L  +FN+   
Sbjct: 54  DVRQLDLAAKGLTTLLKEIGKLRNLQKLNLGSNRLTTLPEEIAQLRNLQRLQLSFNQFTT 113

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  I ++L NL+ L +N N++  LP+ +     L+ L    N L +LP+++  L NLE+
Sbjct: 114 LPKEI-WQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLSLDNNQLANLPQEITQLQNLEL 172

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +S N   L TLP  I  L SL  L V  N+ TT P+ I  L+KLQ L L GN L + P
Sbjct: 173 LFLSGN--RLTTLPEEIAQLRSLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLP 230

Query: 192 MDV 194
            ++
Sbjct: 231 KEI 233



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 110/199 (55%), Gaps = 3/199 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  LD++ N+L  LP  I    KL+ L +  N L +LP+ I   ++LE L  + N+
Sbjct: 120 QLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLSLDNNQLANLPQEITQLQNLELLFLSGNR 179

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP+ I  +L +L+ L +  N+    P+ +T L  L+ LD   N L +LP+++  L N
Sbjct: 180 LTTLPEEIA-QLRSLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQN 238

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L++  N   L  LP  I  L +L  L +S N++TTLP  IG L+ LQ L L+GNP+V
Sbjct: 239 LKALHLGGN--QLAILPEEITQLQNLQTLILSGNQLTTLPKEIGRLQNLQTLILKGNPIV 296

Query: 189 SPPMDVVEQGLSAVKGYLS 207
           S     ++Q L     Y  
Sbjct: 297 SKERQRIQQLLPKCTIYFE 315



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/189 (35%), Positives = 105/189 (55%), Gaps = 3/189 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++ SN+L  LP  I  L  L+ L +S N   +LPK I   ++L+ L+ N N
Sbjct: 73  GKLRNLQKLNLGSNRLTTLPEEIAQLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDN 132

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ I  +   L+ LS++ N++  LPQ +T L +L +L    N L +LPE++  L 
Sbjct: 133 RLTTLPEEIA-QFQKLQWLSLDNNQLANLPQEITQLQNLELLFLSGNRLTTLPEEIAQLR 191

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L +  N     T P  I  L  L  LD+  N++TTLP  IG L+ L+ L L GN L
Sbjct: 192 SLQRLYVYGN--RFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQL 249

Query: 188 VSPPMDVVE 196
              P ++ +
Sbjct: 250 AILPEEITQ 258



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 106/193 (54%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE + A+L N+  L +  NQ   LP  I  L  L+ LD++ N L +LP+ I   + L+ 
Sbjct: 91  LPEEI-AQLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQW 149

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L  LP  I  +L NL+ L ++ N++  LP+ +  L SL+ L    N   + PE
Sbjct: 150 LSLDNNQLANLPQEIT-QLQNLELLFLSGNRLTTLPEEIAQLRSLQRLYVYGNRFTTFPE 208

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L  L+ L++  N   L TLP  IG L +L  L +  N++  LP+ I  L+ LQ L 
Sbjct: 209 EITQLQKLQGLDLGGN--QLTTLPKEIGRLQNLKALHLGGNQLAILPEEITQLQNLQTLI 266

Query: 182 LEGNPLVSPPMDV 194
           L GN L + P ++
Sbjct: 267 LSGNQLTTLPKEI 279



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 66/115 (57%), Gaps = 2/115 (1%)

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           +++ L +    +  L + +  L +L+ L+   N L +LPE++  L NL+ L +S  F   
Sbjct: 54  DVRQLDLAAKGLTTLLKEIGKLRNLQKLNLGSNRLTTLPEEIAQLRNLQRLQLS--FNQF 111

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
            TLP  I  L +L  LD++ N++TTLP+ I   +KLQ LSL+ N L + P ++ +
Sbjct: 112 TTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLSLDNNQLANLPQEITQ 166



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 65/108 (60%), Gaps = 2/108 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE + A+L ++  L V+ N+    P  I  L KL+ LD+ GN L +LPK I   ++L+ 
Sbjct: 183 LPEEI-AQLRSLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKA 241

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           L+   N+L  LP+ I  +L NL+TL ++ N++  LP+ +  L +L+ L
Sbjct: 242 LHLGGNQLAILPEEIT-QLQNLQTLILSGNQLTTLPKEIGRLQNLQTL 288



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 2/93 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
            PE +T +L  +  LD+  NQL  LP  IG L  LK L + GN L  LP+ I   ++L+ 
Sbjct: 206 FPEEIT-QLQKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAILPEEITQLQNLQT 264

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
           L  + N+L  LP  IG  L NL+TL +  N IV
Sbjct: 265 LILSGNQLTTLPKEIG-RLQNLQTLILKGNPIV 296


>gi|332233710|ref|XP_003266046.1| PREDICTED: protein LAP2 isoform 1 [Nomascus leucogenys]
          Length = 1370

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 111/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+SA
Sbjct: 235 LDVSKNNI-----EMVEEGISA 251



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  L+  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 94/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+ E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 244 MVEEGISA-CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP +IG +L NL+T + + N +  LP  +    ++ VL    N L++LP
Sbjct: 303 ELDCSFNEVEALPSSIG-QLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402


>gi|149019124|gb|EDL77765.1| similar to RIKEN cDNA A430093J20 gene, isoform CRA_b [Rattus
           norvegicus]
          Length = 524

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/214 (36%), Positives = 117/214 (54%), Gaps = 23/214 (10%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 120 LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 179 LDLGNNEIYSLPESIGA-LLHLKDLWLDGNQLSELPQEIGNLRNLLCLDVSENRLERLPE 237

Query: 122 DLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELDVS 160
           ++  LI+L  L +SQN                        L  LP +IG   +L EL ++
Sbjct: 238 EISGLISLTDLVVSQNLLETVPDGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLT 297

Query: 161 YNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N++ TLP SIG L+KL  L+ + N LVS P ++
Sbjct: 298 ENRLLTLPTSIGKLKKLNNLNADRNKLVSLPKEI 331



 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 108/195 (55%), Gaps = 7/195 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   AR L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L
Sbjct: 27  VPEEIYRYARSLEELLLD--ANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP+S   L +L  L      L+SL
Sbjct: 85  VELDVSRNDIPEIPESISF-CKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++ NL NL  L + +N   L  LP S+  L  L ELD+  N+I +LP+SIG L  L+ 
Sbjct: 144 PENIGNLYNLASLELRENL--LTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALLHLKD 201

Query: 180 LSLEGNPLVSPPMDV 194
           L L+GN L   P ++
Sbjct: 202 LWLDGNQLSELPQEI 216



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 98/184 (53%), Gaps = 3/184 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L+V D SGN L  LP++    ++L  L+ N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDI 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD   N + SLPE +  L+
Sbjct: 139 SLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALL 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L +  N   L  LP  IG L +L+ LDVS N++  LP+ I  L  L  L +  N L
Sbjct: 198 HLKDLWLDGN--QLSELPQEIGNLRNLLCLDVSENRLERLPEEISGLISLTDLVVSQNLL 255

Query: 188 VSPP 191
            + P
Sbjct: 256 ETVP 259



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/193 (36%), Positives = 104/193 (53%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+SLT +L  +  LD+ +N++  LP SIG L  LK L + GN L  LP+ I N R+L  
Sbjct: 166 LPDSLT-QLRRLEELDLGNNEIYSLPESIGALLHLKDLWLDGNQLSELPQEIGNLRNLLC 224

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L +LP+ I   LI+L  L ++ N +  +P  +  L  L +L    N L  LPE
Sbjct: 225 LDVSENRLERLPEEISG-LISLTDLVVSQNLLETVPDGIGKLKKLSILKLDQNRLTQLPE 283

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + +  NL  L +++N   L TLP SIG L  L  L+   NK+ +LP  IG    L    
Sbjct: 284 AIGDCENLTELVLTEN--RLLTLPTSIGKLKKLNNLNADRNKLVSLPKEIGGCCSLTVFC 341

Query: 182 LEGNPLVSPPMDV 194
           +  N L   P +V
Sbjct: 342 IRDNRLTRIPSEV 354



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/188 (37%), Positives = 101/188 (53%), Gaps = 7/188 (3%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N++ LDV  N+L+ LP  I  L  L  L VS NLLE++P  I   + L  L  + N+L
Sbjct: 219 LRNLLCLDVSENRLERLPEEISGLISLTDLVVSQNLLETVPDGIGKLKKLSILKLDQNRL 278

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            QLP+ IG +  NL  L +  N+++ LP S+  L  L  L+A  N L SLP+++    +L
Sbjct: 279 TQLPEAIG-DCENLTELVLTENRLLTLPTSIGKLKKLNNLNADRNKLVSLPKEIGGCCSL 337

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN---P 186
            V  I  N   L  +P  +   M L  LDV+ N++  LP S+  L KL+ L L  N   P
Sbjct: 338 TVFCIRDN--RLTRIPSEVSQAMELHVLDVAGNRLHHLPLSLTTL-KLKALWLSDNQSQP 394

Query: 187 LVSPPMDV 194
           L++   DV
Sbjct: 395 LLTFQTDV 402



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 2/138 (1%)

Query: 57  RSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
           R +E ++     L  +P+ I     +L+ L ++ N++  LP+    L  LR L    N +
Sbjct: 12  RHVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + LP ++ N + L  L++S+N   +  +P SI    +L   D S N +T LP+S   L+ 
Sbjct: 72  QRLPPEIANFMQLVELDVSRN--DIPEIPESISFCKALQVADFSGNPLTRLPESFPELQN 129

Query: 177 LQKLSLEGNPLVSPPMDV 194
           L  LS+    L S P ++
Sbjct: 130 LTCLSVNDISLQSLPENI 147


>gi|195501949|ref|XP_002098015.1| GE24170 [Drosophila yakuba]
 gi|261277890|sp|B4PU77.1|SUR8_DROYA RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|194184116|gb|EDW97727.1| GE24170 [Drosophila yakuba]
          Length = 645

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 112/191 (58%), Gaps = 4/191 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP S     +++  L ++SN++  LP  IGCL  L+ L ++ N L SLP++++NC  L+
Sbjct: 178 VIP-STVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSLPESLQNCSQLK 236

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKL ++P  I + L +L TL +  N+I  +   L  L +L +L  R N ++ L 
Sbjct: 237 VLDLRHNKLAEIPPVI-YRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELG 295

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             +  L+NL  L++S N  +LE LP  IG  ++L  LD+ +N++  +PDSIG L+ L +L
Sbjct: 296 SAIGALVNLTTLDVSHN--HLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRL 353

Query: 181 SLEGNPLVSPP 191
            +  N L S P
Sbjct: 354 GMRYNRLSSVP 364



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 116/245 (47%), Gaps = 51/245 (20%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +    +N+  LD+  N+L  +P+SIG L  L  L +  N L S+P T++NC+S++E
Sbjct: 317 LPEDI-GNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPATLKNCKSMDE 375

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ------------SLTH------- 102
            N   N + QLPD +   L  L T++++ N+    P             +L H       
Sbjct: 376 FNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIP 435

Query: 103 -------------------LTSLRV----------LDARLNCLKSLPEDLENLINLEVLN 133
                              LT+L +          L+   N L+ LP+D+ NL NLE+L 
Sbjct: 436 YGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILI 495

Query: 134 ISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMD 193
           +S N   L+ +P +IG L  L  LD+  N+I  LP  IG L +LQ+L L+ N +   P  
Sbjct: 496 LSNNM--LKKIPNTIGNLRRLRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPRS 553

Query: 194 VVEQG 198
           +   G
Sbjct: 554 IGHLG 558



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 97/161 (60%), Gaps = 2/161 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           +N+V L++ +N L+ LP+ I  L  L++L +S N+L+ +P TI N R L  L+   N++ 
Sbjct: 466 VNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIE 525

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG  L  L+ L +  N+I +LP+S+ HL +L  L    N L+ LPE++ +L +LE
Sbjct: 526 VLPHEIGL-LHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLE 584

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
            L I+QN   LE LP+ + L  +L  L++    ++T+P  I
Sbjct: 585 NLYINQN-PGLEKLPFELALCQNLKYLNIDKCPLSTIPPEI 624



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 26/179 (14%)

Query: 36  LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           +K LD+S + +  +P T++ C  L EL    NK+ QLP  IG  L++L+ L++N N +  
Sbjct: 166 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGC-LVSLRNLALNENSLTS 224

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLP-----------------------EDLENLINLEVL 132
           LP+SL + + L+VLD R N L  +P                       +DL  L+NL +L
Sbjct: 225 LPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTML 284

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           ++ +N   +  L  +IG L++L  LDVS+N +  LP+ IG    L  L L+ N L+  P
Sbjct: 285 SLREN--KIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIP 341



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 99/185 (53%), Gaps = 4/185 (2%)

Query: 3   PESLTARLLNVVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEE 61
           P    A+  NV  +++  N++  +P  I   +K L  L++  N+L +LP  I    ++ E
Sbjct: 411 PTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVE 470

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N L++LPD I   L NL+ L ++ N +  +P ++ +L  LR+LD   N ++ LP 
Sbjct: 471 LNLATNALQKLPDDI-MNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIEVLPH 529

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L  L+ L +  N   +  LP SIG L +L  L VS N +  LP+ IG L  L+ L 
Sbjct: 530 EIGLLHELQRLILQTN--QITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLY 587

Query: 182 LEGNP 186
           +  NP
Sbjct: 588 INQNP 592



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 103/188 (54%), Gaps = 4/188 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L+N+ +L +  N+++ L ++IG L  L  LDVS N LE LP+ I NC +L  L+   N+
Sbjct: 277 QLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNE 336

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLI 127
           L  +PD+IG  L +L  L +  N++  +P +L +  S+   +   N +  LP+  L +L 
Sbjct: 337 LLDIPDSIG-NLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLS 395

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNP 186
            L  + +S+N Q+            ++  +++ +N+I  +P  I    K L KL+++ N 
Sbjct: 396 GLTTITLSRN-QFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENM 454

Query: 187 LVSPPMDV 194
           L + P+D+
Sbjct: 455 LTALPLDI 462



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +P+ + A L  +  + +  NQ    P       + +  +++  N ++ +P  I    + L
Sbjct: 386 LPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGL 445

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N L  LP  IG   +N+  L++  N +  LP  + +L +L +L    N LK +
Sbjct: 446 TKLNMKENMLTALPLDIG-TWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKI 504

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  + NL  L +L++ +N   +E LP+ IGLL  L  L +  N+IT LP SIG L  L  
Sbjct: 505 PNTIGNLRRLRILDLEEN--RIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTH 562

Query: 180 LSLEGNPLVSPPMDV 194
           LS+  N L   P ++
Sbjct: 563 LSVSENNLQFLPEEI 577



 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 28/146 (19%)

Query: 51  KTIENCR--SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRV 108
           K ++ CR   ++ L+ + + +  +P T+  E ++L  L +  NKI  LP  +  L SLR 
Sbjct: 156 KALQRCRDEGIKRLDLSKSSITVIPSTVK-ECVHLTELYLYSNKIGQLPPEIGCLVSLRN 214

Query: 109 LDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           L    N L SLPE L+N   L+VL                         D+ +NK+  +P
Sbjct: 215 LALNENSLTSLPESLQNCSQLKVL-------------------------DLRHNKLAEIP 249

Query: 169 DSIGCLRKLQKLSLEGNPLVSPPMDV 194
             I  LR L  L L  N + +   D+
Sbjct: 250 PVIYRLRSLTTLYLRFNRITAVADDL 275


>gi|225690585|ref|NP_766116.3| leucine-rich repeat-containing protein 1 isoform 2 [Mus musculus]
 gi|148694403|gb|EDL26350.1| leucine rich repeat containing 1, isoform CRA_b [Mus musculus]
          Length = 479

 Score =  101 bits (252), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/214 (36%), Positives = 116/214 (54%), Gaps = 23/214 (10%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 75  LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 133

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 134 LDLGNNEIYNLPESIG-ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPE 192

Query: 122 DLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELDVS 160
           ++  L +L  L ISQN                        L  LP +IG   +L EL ++
Sbjct: 193 EISGLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLT 252

Query: 161 YNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N++ TLP SIG L+KL  L+ + N LVS P ++
Sbjct: 253 ENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI 286



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 3/184 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L+V D SGN L  LP++    ++L  L+ N  
Sbjct: 34  ANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDI 93

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD   N + +LPE +  L+
Sbjct: 94  SLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALL 152

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L +  N   L  LP  IG L +L+ LDVS N++  LP+ I  L  L  L +  N L
Sbjct: 153 HLKDLWLDGN--QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLL 210

Query: 188 VSPP 191
            + P
Sbjct: 211 ETIP 214



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 109/194 (56%), Gaps = 5/194 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L+ +  L +  N+++ LP  I    +L  LDVS N +  +P++I  C++L+  + + N 
Sbjct: 12  QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNP 71

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L +LP++   EL NL  LS+N   +  LP+++ +L +L  L+ R N L  LP+ L  L  
Sbjct: 72  LTRLPESFP-ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRR 130

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           LE L++  N  Y   LP SIG L+ L +L +  N+++ LP  IG L+ L  L +  N L 
Sbjct: 131 LEELDLGNNEIY--NLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLE 188

Query: 189 SPPMDVVEQGLSAV 202
             P ++   GL+++
Sbjct: 189 RLPEEI--SGLTSL 200



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 104/188 (55%), Gaps = 7/188 (3%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N++ LDV  N+L+ LP  I  L+ L  L +S NLLE++P+ I   + L  L  + N+L
Sbjct: 174 LKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRL 233

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            QLP+ IG +  NL  L +  N+++ LP+S+  L  L  L+A  N L SLP+++    +L
Sbjct: 234 TQLPEAIG-DCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSL 292

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN---P 186
            +  I  N   L  LP  +   + L  LDV+ N++  LP S+  L KL+ L L  N   P
Sbjct: 293 TMFCIRDN--RLTRLPAEVSQAVELHVLDVAGNRLHHLPLSLTTL-KLKALWLSDNQSQP 349

Query: 187 LVSPPMDV 194
           L++   D+
Sbjct: 350 LLTFQTDI 357



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 25/140 (17%)

Query: 78  FELINLKTLSINCNKIVIL-----------------------PQSLTHLTSLRVLDARLN 114
           F+L+ L+ L ++ N+I  L                       P+S+    +L+V D   N
Sbjct: 11  FQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGN 70

Query: 115 CLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCL 174
            L  LPE    L NL  L++  N   L++LP +IG L +L  L++  N +T LPDS+  L
Sbjct: 71  PLTRLPESFPELQNLTCLSV--NDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQL 128

Query: 175 RKLQKLSLEGNPLVSPPMDV 194
           R+L++L L  N + + P  +
Sbjct: 129 RRLEELDLGNNEIYNLPESI 148


>gi|260819644|ref|XP_002605146.1| hypothetical protein BRAFLDRAFT_80919 [Branchiostoma floridae]
 gi|229290477|gb|EEN61156.1| hypothetical protein BRAFLDRAFT_80919 [Branchiostoma floridae]
          Length = 844

 Score =  101 bits (252), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/216 (36%), Positives = 117/216 (54%), Gaps = 27/216 (12%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRS-LE 60
           +PE L  +L  +V L++  NQL C+P +IG L  L+ LD+S N L+ LP  I N R  L 
Sbjct: 219 LPEGLD-KLQRLVSLNLSHNQLDCIPPTIGTLRYLEFLDLSHNQLDFLPDDICNLRHCLV 277

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILP----------------------Q 98
            L+A+ N+L QLPD I   L  +  L ++ NK+  LP                      +
Sbjct: 278 TLHASHNRLTQLPDQI-HNLRKIHVLDLSENKLTSLPAKFGKTDSVVSLDLSHNQLSSLE 336

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
            L  L  L  L+A  N L SLPE + +L++L VL+I+ N   ++ +P  IG L  L  +D
Sbjct: 337 RLAGLGKLESLNASYNVLTSLPEGVGSLVSLRVLDIAHN--EIKEMPAKIGGLRHLKNVD 394

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           VS+NK+ TLPD++G  + L +L+   N L + P ++
Sbjct: 395 VSHNKLETLPDTLGDDQLLSRLNASHNALTALPTNM 430



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 110/236 (46%), Gaps = 50/236 (21%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  RL ++  LDV +N ++ +P S+  L  L  ++ S N ++SLPKTI    +L  
Sbjct: 82  VPKGI-GRLESLRSLDVTNNTVRAIPGSVSRLKYLTSIEASTNQIKSLPKTIHKASALTT 140

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHL------------------ 103
           +NA  NKL+ LP  IG    ++  +  + N I  LP+S+  L                  
Sbjct: 141 INAAGNKLKTLPKNIGSS-SSITYIDASSNSIKTLPKSIYKLHSSVNVSNNQLRTLPAVI 199

Query: 104 ----TSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLL-------- 151
                S+ V+DA  N + +LPE L+ L  L  LN+S N   L+ +P +IG L        
Sbjct: 200 AKGTCSINVIDASRNLIHTLPEGLDKLQRLVSLNLSHN--QLDCIPPTIGTLRYLEFLDL 257

Query: 152 ----------------MSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
                             LV L  S+N++T LPD I  LRK+  L L  N L S P
Sbjct: 258 SHNQLDFLPDDICNLRHCLVTLHASHNRLTQLPDQIHNLRKIHVLDLSENKLTSLP 313



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 111/215 (51%), Gaps = 15/215 (6%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RL  +  LD+  N+L  LP  +G  + L  LD S N +E    ++   RSL+ LN + NK
Sbjct: 554 RLRQLQHLDLAHNELTALPPKLGDFAYLSHLDTSNNQVEEFMPSLVKLRSLQYLNFSNNK 613

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQS-LTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L  LPD  G  L  L TL ++ N++  LP   +  L SL VL+A  N + ++P D+  L 
Sbjct: 614 LTSLPDNFG-TLSQLTTLDLSANQLPELPNDRIDILASLLVLNASGNQVTAIPMDMPYLY 672

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            ++VLN+S N   ++ LP  I  + SL  LD+S N +  +P++I  L  ++ + +  N L
Sbjct: 673 RIQVLNLSANV--IKALPGDIWRMKSLTTLDLSDNMLEGIPETITKLPSIKSVDISNNKL 730

Query: 188 VSPP--MDVVEQGLSAVKGYLSEKMNNDHKSPKKK 220
            S P  M+ + Q  S         +N   + P KK
Sbjct: 731 RSFPKTMERLRQKAS---------VNTSDQDPNKK 756



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 29/206 (14%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L+   N L  LP  +G L  L+VLD++ N ++ +P  I   R L+ ++ + NKL  LPDT
Sbjct: 347 LNASYNVLTSLPEGVGSLVSLRVLDIAHNEIKEMPAKIGGLRHLKNVDVSHNKLETLPDT 406

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           +G + + L  L+ + N +  LP ++  L +L  LD   N L++LPE    L +L  L++S
Sbjct: 407 LGDDQL-LSRLNASHNALTALPTNMRKLRTLDALDVSRNKLEALPEPFHFLRSLSFLDVS 465

Query: 136 QNFQYLETLPYSIGL----------------------------LMSLVELDVSYNKITTL 167
            N   + T P S+                              L SL ELD+S  ++TTL
Sbjct: 466 DNKLPVLTAPRSLTCLKVAGNPLRLPTRVAGDNKSLIVRIGDDLRSLTELDISNIELTTL 525

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMD 193
           P +I  LR L+K +   N L S P +
Sbjct: 526 PTTICNLRFLEKFNARNNKLNSLPAN 551



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 106/201 (52%), Gaps = 25/201 (12%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD  +N+L+ +P  IG L  L+ LDV+ N + ++P ++   + L  + A+ N+++ LP T
Sbjct: 72  LDAQNNRLRRVPKGIGRLESLRSLDVTNNTVRAIPGSVSRLKYLTSIEASTNQIKSLPKT 131

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENL--------- 126
           I  +   L T++   NK+  LP+++   +S+  +DA  N +K+LP+ +  L         
Sbjct: 132 I-HKASALTTINAAGNKLKTLPKNIGSSSSITYIDASSNSIKTLPKSIYKLHSSVNVSNN 190

Query: 127 -------------INLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGC 173
                         ++ V++ S+N   + TLP  +  L  LV L++S+N++  +P +IG 
Sbjct: 191 QLRTLPAVIAKGTCSINVIDASRNL--IHTLPEGLDKLQRLVSLNLSHNQLDCIPPTIGT 248

Query: 174 LRKLQKLSLEGNPLVSPPMDV 194
           LR L+ L L  N L   P D+
Sbjct: 249 LRYLEFLDLSHNQLDFLPDDI 269



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 108/223 (48%), Gaps = 40/223 (17%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +   L+++ VLD+  N++K +P  IG L  LK +DVS N LE+LP T+ + + L  
Sbjct: 357 LPEGV-GSLVSLRVLDIAHNEIKEMPAKIGGLRHLKNVDVSHNKLETLPDTLGDDQLLSR 415

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDA---------- 111
           LNA+ N L  LP  +  +L  L  L ++ NK+  LP+    L SL  LD           
Sbjct: 416 LNASHNALTALPTNMR-KLRTLDALDVSRNKLEALPEPFHFLRSLSFLDVSDNKLPVLTA 474

Query: 112 --RLNCLK------SLP---------------EDLENLINLEVLNISQNFQYLETLPYSI 148
              L CLK       LP               +DL +L  L++ NI      L TLP +I
Sbjct: 475 PRSLTCLKVAGNPLRLPTRVAGDNKSLIVRIGDDLRSLTELDISNIE-----LTTLPTTI 529

Query: 149 GLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
             L  L + +   NK+ +LP +   LR+LQ L L  N L + P
Sbjct: 530 CNLRFLEKFNARNNKLNSLPANFHRLRQLQHLDLAHNELTALP 572



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 92/180 (51%), Gaps = 4/180 (2%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+ + +L  LP +I  L  L+  +   N L SLP      R L+ L+   N+L  LP  
Sbjct: 515 LDISNIELTTLPTTICNLRFLEKFNARNNKLNSLPANFHRLRQLQHLDLAHNELTALPPK 574

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           +G +   L  L  + N++     SL  L SL+ L+   N L SLP++   L  L  L++S
Sbjct: 575 LG-DFAYLSHLDTSNNQVEEFMPSLVKLRSLQYLNFSNNKLTSLPDNFGTLSQLTTLDLS 633

Query: 136 QNFQYLETLPYS-IGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L  LP   I +L SL+ L+ S N++T +P  +  L ++Q L+L  N + + P D+
Sbjct: 634 AN--QLPELPNDRIDILASLLVLNASGNQVTAIPMDMPYLYRIQVLNLSANVIKALPGDI 691


>gi|254415005|ref|ZP_05028768.1| Miro-like protein [Coleofasciculus chthonoplastes PCC 7420]
 gi|196178152|gb|EDX73153.1| Miro-like protein [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1090

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/196 (37%), Positives = 108/196 (55%), Gaps = 18/196 (9%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVL-----------DVSG---NLLESLPKTIENCRSLEE 61
           LD+  N L  LP  IG L+ LK L           D++G   N L +LP+ I     LEE
Sbjct: 21  LDLSGNDLTVLPPDIGKLTHLKKLILGKYQYDDEGDIAGFIGNKLSALPREIGQLHQLEE 80

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+L++LP  I  +L +L++L++ CNKI  LP  +  LTSL+ LD R N ++ LP 
Sbjct: 81  LQIALNQLQELPPEI-LQLTSLQSLNLGCNKIQELPPEIGQLTSLQSLDLRYNKIQELPP 139

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVS-YNKITTLPDSIGCLRKLQKL 180
           ++  L +L+ LN+S N   ++ LP  IG L +L  LD+S +N I  LP  I  L  LQ L
Sbjct: 140 EIGQLTSLQSLNLSGN--NIQELPPEIGQLTALQSLDLSFFNNIQELPPQIFQLTSLQSL 197

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N +   P ++++
Sbjct: 198 HLSFNKIQELPAEILQ 213



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/171 (37%), Positives = 98/171 (57%), Gaps = 3/171 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N ++ LP  I  L+ L+ L +S N ++ LP  I    SL+ L+ +FNK+++LP  I  +L
Sbjct: 179 NNIQELPPQIFQLTSLQSLHLSFNKIQELPAEILQLTSLQSLHLSFNKIQELPAEI-LQL 237

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            +L++L ++ NKI  LP  +  LTSL+ L+   N ++ LP ++  L +L+ LN+  N   
Sbjct: 238 TSLQSLHLSFNKIQELPAEILQLTSLQSLNLYSNNIQELPPEILQLTSLQSLNLGGN--N 295

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           ++ LP  I  L SL  L++  N I  LP  I  L  L+KL L  NPL  PP
Sbjct: 296 IQELPPEILQLTSLQSLNLRSNNIQELPPEIRQLPNLKKLDLRSNPLPIPP 346



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 111/195 (56%), Gaps = 6/195 (3%)

Query: 3   PESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEEL 62
           PE L  +L ++  L++  N+++ LP  IG L+ L+ LD+  N ++ LP  I    SL+ L
Sbjct: 93  PEIL--QLTSLQSLNLGCNKIQELPPEIGQLTSLQSLDLRYNKIQELPPEIGQLTSLQSL 150

Query: 63  NANFNKLRQLPDTIGFELINLKTLSIN-CNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           N + N +++LP  IG +L  L++L ++  N I  LP  +  LTSL+ L    N ++ LP 
Sbjct: 151 NLSGNNIQELPPEIG-QLTALQSLDLSFFNNIQELPPQIFQLTSLQSLHLSFNKIQELPA 209

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L+ L++S  F  ++ LP  I  L SL  L +S+NKI  LP  I  L  LQ L+
Sbjct: 210 EILQLTSLQSLHLS--FNKIQELPAEILQLTSLQSLHLSFNKIQELPAEILQLTSLQSLN 267

Query: 182 LEGNPLVSPPMDVVE 196
           L  N +   P ++++
Sbjct: 268 LYSNNIQELPPEILQ 282



 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 75/129 (58%), Gaps = 1/129 (0%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L ++  L +  N+++ LP  I  L+ L+ L +S N ++ LP  I    SL+ LN   N 
Sbjct: 213 QLTSLQSLHLSFNKIQELPAEILQLTSLQSLHLSFNKIQELPAEILQLTSLQSLNLYSNN 272

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           +++LP  I  +L +L++L++  N I  LP  +  LTSL+ L+ R N ++ LP ++  L N
Sbjct: 273 IQELPPEI-LQLTSLQSLNLGGNNIQELPPEILQLTSLQSLNLRSNNIQELPPEIRQLPN 331

Query: 129 LEVLNISQN 137
           L+ L++  N
Sbjct: 332 LKKLDLRSN 340



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 1/92 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L ++  L+++SN ++ LP  I  L+ L+ L++ GN ++ LP  I    SL+ LN   N 
Sbjct: 259 QLTSLQSLNLYSNNIQELPPEILQLTSLQSLNLGGNNIQELPPEILQLTSLQSLNLRSNN 318

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSL 100
           +++LP  I  +L NLK L +  N + I P+ L
Sbjct: 319 IQELPPEIR-QLPNLKKLDLRSNPLPIPPEIL 349


>gi|195391504|ref|XP_002054400.1| GJ22826 [Drosophila virilis]
 gi|261277888|sp|B4LXW1.1|SUR8_DROVI RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|194152486|gb|EDW67920.1| GJ22826 [Drosophila virilis]
          Length = 614

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 107/179 (59%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L ++SN++  LP  IGCL  L+ L ++ N L SLP+++++C  L+ L+   NKL ++P  
Sbjct: 161 LYLYSNKIGQLPTEIGCLVNLRNLALNENSLTSLPESLKHCTQLKVLDLRHNKLAEIPSV 220

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           I + L +L TL +  N+I  +   L  L +L +L  R N +K L   +  L+NL  L++S
Sbjct: 221 I-YRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIKELGSAIGALVNLTTLDVS 279

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N  +LE LP  IG  ++L  LD+ +N++  +PDSIG L+ L +L L  N L S P+ +
Sbjct: 280 HN--HLEHLPDDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGLRYNRLNSVPISL 336



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 109/193 (56%), Gaps = 4/193 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L+N+  L ++ N L  LP S+   ++LKVLD+  N L  +P  I   RSL  L   FN++
Sbjct: 178 LVNLRNLALNENSLTSLPESLKHCTQLKVLDLRHNKLAEIPSVIYRLRSLTTLYLRFNRI 237

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             + D +  +L+NL  LS+  NKI  L  ++  L +L  LD   N L+ LP+D+ N +NL
Sbjct: 238 TAVADDL-RQLVNLTMLSLRENKIKELGSAIGALVNLTTLDVSHNHLEHLPDDIGNCVNL 296

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
             L++  N   L  +P SIG L SLV L + YN++ ++P S+   + + + ++EGN +  
Sbjct: 297 SALDLQHN--ELLDIPDSIGNLKSLVRLGLRYNRLNSVPISLKNCKSMDEFNVEGNGITQ 354

Query: 190 PPMDVVEQGLSAV 202
            P D +   LSA+
Sbjct: 355 LP-DGMLASLSAL 366



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 95/179 (53%), Gaps = 26/179 (14%)

Query: 36  LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           +K LD+S + +  LP T+  C  L EL    NK+ QLP  IG  L+NL+ L++N N +  
Sbjct: 135 IKRLDLSKSSITVLPNTVRECVHLTELYLYSNKIGQLPTEIGC-LVNLRNLALNENSLTS 193

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLP-----------------------EDLENLINLEVL 132
           LP+SL H T L+VLD R N L  +P                       +DL  L+NL +L
Sbjct: 194 LPESLKHCTQLKVLDLRHNKLAEIPSVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTML 253

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           ++ +N   ++ L  +IG L++L  LDVS+N +  LPD IG    L  L L+ N L+  P
Sbjct: 254 SLREN--KIKELGSAIGALVNLTTLDVSHNHLEHLPDDIGNCVNLSALDLQHNELLDIP 310



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 97/161 (60%), Gaps = 2/161 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           +N+V L++ +N L+ LP+ I  L  L++L +S N+L+ +P TI N R L  L+   N++ 
Sbjct: 435 VNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIE 494

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG  L  L+ L +  N+I +LP+S+ HL++L  L    N L+ LPE++ +L +LE
Sbjct: 495 VLPHEIGL-LHELQRLILQTNQITMLPRSIGHLSNLTHLSVSENNLQFLPEEIGSLESLE 553

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
            L I+QN   LE LP+ + L  +L  L++    + T+P  I
Sbjct: 554 NLYINQN-PGLEKLPFELALCQNLKYLNIDKCPLGTIPPEI 593



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 110/232 (47%), Gaps = 50/232 (21%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           +N+  LD+  N+L  +P+SIG L  L  L +  N L S+P +++NC+S++E N   N + 
Sbjct: 294 VNLSALDLQHNELLDIPDSIGNLKSLVRLGLRYNRLNSVPISLKNCKSMDEFNVEGNGIT 353

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQ------------SLTH---------------- 102
           QLPD +   L  L T++++ N+    P             +L H                
Sbjct: 354 QLPDGMLASLSALTTITLSRNQFTSYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKG 413

Query: 103 LTSLRV--------------------LDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           LT L +                    L+   N L+ LP+D+ NL NLE+L +S N   L+
Sbjct: 414 LTKLNMKENMLTALPLDVGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNM--LK 471

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            +P +IG L  L  LD+  N+I  LP  IG L +LQ+L L+ N +   P  +
Sbjct: 472 KIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPRSI 523



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 110/206 (53%), Gaps = 4/206 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP  + +R   +  L++  N L  LP  +G    +  L+++ N L+ LP  I N ++LE 
Sbjct: 403 IPYGIFSRAKGLTKLNMKENMLTALPLDVGTWVNMVELNLATNALQKLPDDIMNLQNLEI 462

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+++P+TIG  L  L+ L +  N+I +LP  +  L  L+ L  + N +  LP 
Sbjct: 463 LILSNNMLKKIPNTIG-NLRKLRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPR 521

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYN-KITTLPDSIGCLRKLQKL 180
            + +L NL  L++S+N   L+ LP  IG L SL  L ++ N  +  LP  +   + L+ L
Sbjct: 522 SIGHLSNLTHLSVSEN--NLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQNLKYL 579

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYL 206
           +++  PL + P ++   G S V  +L
Sbjct: 580 NIDKCPLGTIPPEIQAGGPSLVLQWL 605



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 102/188 (54%), Gaps = 4/188 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L+N+ +L +  N++K L ++IG L  L  LDVS N LE LP  I NC +L  L+   N+
Sbjct: 246 QLVNLTMLSLRENKIKELGSAIGALVNLTTLDVSHNHLEHLPDDIGNCVNLSALDLQHNE 305

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLI 127
           L  +PD+IG  L +L  L +  N++  +P SL +  S+   +   N +  LP+  L +L 
Sbjct: 306 LLDIPDSIG-NLKSLVRLGLRYNRLNSVPISLKNCKSMDEFNVEGNGITQLPDGMLASLS 364

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNP 186
            L  + +S+N Q+            ++  +++ +N+I  +P  I    K L KL+++ N 
Sbjct: 365 ALTTITLSRN-QFTSYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENM 423

Query: 187 LVSPPMDV 194
           L + P+DV
Sbjct: 424 LTALPLDV 431


>gi|194900450|ref|XP_001979770.1| GG16778 [Drosophila erecta]
 gi|261277885|sp|B3P3E8.1|SUR8_DROER RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|190651473|gb|EDV48728.1| GG16778 [Drosophila erecta]
          Length = 644

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 112/191 (58%), Gaps = 4/191 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP S     +++  L ++SN++  LP  IGCL  L+ L ++ N L SLP++++NC  L+
Sbjct: 177 VIP-STVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSLPESLQNCSQLK 235

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKL ++P  I + L +L TL +  N+I  +   L  L +L +L  R N ++ L 
Sbjct: 236 VLDLRHNKLAEIPPVI-YRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELG 294

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             +  L+NL  L++S N  +LE LP  IG  ++L  LD+ +N++  +PDSIG L+ L +L
Sbjct: 295 SAIGALVNLTTLDVSHN--HLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRL 352

Query: 181 SLEGNPLVSPP 191
            +  N L S P
Sbjct: 353 GMRYNRLNSVP 363



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 115/245 (46%), Gaps = 51/245 (20%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +    +N+  LD+  N+L  +P+SIG L  L  L +  N L S+P T++NC+S++E
Sbjct: 316 LPEDI-GNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLNSVPATLKNCKSMDE 374

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ------------SLTH------- 102
            N   N + QLPD +   L  L T++++ N+    P             +L H       
Sbjct: 375 FNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIP 434

Query: 103 ---------LTSLRV--------------------LDARLNCLKSLPEDLENLINLEVLN 133
                    LT L +                    L+   N L+ LP+D+ NL NLE+L 
Sbjct: 435 YGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILI 494

Query: 134 ISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMD 193
           +S N   L+ +P +IG L  L  LD+  N+I  LP  IG L +LQ+L L+ N +   P  
Sbjct: 495 LSNNM--LKKIPNTIGNLRRLRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPRS 552

Query: 194 VVEQG 198
           +   G
Sbjct: 553 IGHLG 557



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 97/161 (60%), Gaps = 2/161 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           +N+V L++ +N L+ LP+ I  L  L++L +S N+L+ +P TI N R L  L+   N++ 
Sbjct: 465 VNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIE 524

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG  L  L+ L +  N+I +LP+S+ HL +L  L    N L+ LPE++ +L +LE
Sbjct: 525 VLPHEIGL-LHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLE 583

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
            L I+QN   LE LP+ + L  +L  L++    ++T+P  I
Sbjct: 584 NLYINQN-PGLEKLPFELALCQNLKYLNIDKCPLSTIPPEI 623



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 26/179 (14%)

Query: 36  LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           +K LD+S + +  +P T++ C  L EL    NK+ QLP  IG  L++L+ L++N N +  
Sbjct: 165 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGC-LVSLRNLALNENSLTS 223

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLP-----------------------EDLENLINLEVL 132
           LP+SL + + L+VLD R N L  +P                       +DL  L+NL +L
Sbjct: 224 LPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTML 283

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           ++ +N   +  L  +IG L++L  LDVS+N +  LP+ IG    L  L L+ N L+  P
Sbjct: 284 SLREN--KIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIP 340



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 99/185 (53%), Gaps = 4/185 (2%)

Query: 3   PESLTARLLNVVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEE 61
           P    A+  NV  +++  N++  +P  I   +K L  L++  N+L +LP  I    ++ E
Sbjct: 410 PTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVE 469

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N L++LPD I   L NL+ L ++ N +  +P ++ +L  LR+LD   N ++ LP 
Sbjct: 470 LNLATNALQKLPDDI-MNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIEVLPH 528

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L  L+ L +  N   +  LP SIG L +L  L VS N +  LP+ IG L  L+ L 
Sbjct: 529 EIGLLHELQRLILQTN--QITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLY 586

Query: 182 LEGNP 186
           +  NP
Sbjct: 587 INQNP 591



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 103/188 (54%), Gaps = 4/188 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L+N+ +L +  N+++ L ++IG L  L  LDVS N LE LP+ I NC +L  L+   N+
Sbjct: 276 QLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNE 335

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLI 127
           L  +PD+IG  L +L  L +  N++  +P +L +  S+   +   N +  LP+  L +L 
Sbjct: 336 LLDIPDSIG-NLKSLVRLGMRYNRLNSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLS 394

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNP 186
            L  + +S+N Q+            ++  +++ +N+I  +P  I    K L KL+++ N 
Sbjct: 395 GLTTITLSRN-QFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENM 453

Query: 187 LVSPPMDV 194
           L + P+D+
Sbjct: 454 LTALPLDI 461



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +P+ + A L  +  + +  NQ    P       + +  +++  N ++ +P  I    + L
Sbjct: 385 LPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGL 444

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N L  LP  IG   +N+  L++  N +  LP  + +L +L +L    N LK +
Sbjct: 445 TKLNMKENMLTALPLDIG-TWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKI 503

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  + NL  L +L++ +N   +E LP+ IGLL  L  L +  N+IT LP SIG L  L  
Sbjct: 504 PNTIGNLRRLRILDLEEN--RIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTH 561

Query: 180 LSLEGNPLVSPPMDV 194
           LS+  N L   P ++
Sbjct: 562 LSVSENNLQFLPEEI 576



 Score = 41.2 bits (95), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 28/146 (19%)

Query: 51  KTIENCR--SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRV 108
           K ++ CR   ++ L+ + + +  +P T+  E ++L  L +  NKI  LP  +  L SLR 
Sbjct: 155 KALQRCRDEGIKRLDLSKSSITVIPSTVK-ECVHLTELYLYSNKIGQLPPEIGCLVSLRN 213

Query: 109 LDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           L    N L SLPE L+N   L+VL                         D+ +NK+  +P
Sbjct: 214 LALNENSLTSLPESLQNCSQLKVL-------------------------DLRHNKLAEIP 248

Query: 169 DSIGCLRKLQKLSLEGNPLVSPPMDV 194
             I  LR L  L L  N + +   D+
Sbjct: 249 PVIYRLRSLTTLYLRFNRITAVADDL 274


>gi|449283629|gb|EMC90234.1| Leucine-rich repeat-containing protein 1, partial [Columba livia]
          Length = 471

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/193 (39%), Positives = 108/193 (55%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP+++   + LEE
Sbjct: 67  LPESF-PELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQRLEE 125

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+L  LP+TIG  L NLK L ++ N++  +PQ + +L +L  LD   N L+ LPE
Sbjct: 126 LDLGNNELYHLPETIG-ALFNLKDLWLDGNQLTEIPQEVGNLKNLLCLDVSENKLECLPE 184

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L  L +SQN   L+ LP  IG L  L  L V  NK+  L DSIG    L +L 
Sbjct: 185 EISGLTSLTDLLVSQNL--LQVLPDGIGKLRRLSILKVDQNKLIQLTDSIGDCESLTELV 242

Query: 182 LEGNPLVSPPMDV 194
           L  N L S P  +
Sbjct: 243 LTENQLQSLPKSI 255



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 101/204 (49%), Gaps = 26/204 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LD+  N +  +P SI     L+V D SGN L  LP++    ++L  L+ N  
Sbjct: 26  ANFMQLVELDLSRNDIPEIPESISFCRALQVADFSGNPLTRLPESFPELQNLTCLSVNDI 85

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE------ 121
            L+ LP+ IG  L NL +L +  N +  LP+SL  L  L  LD   N L  LPE      
Sbjct: 86  SLQALPENIG-NLYNLASLELRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGALF 144

Query: 122 -----------------DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                            ++ NL NL  L++S+N   LE LP  I  L SL +L VS N +
Sbjct: 145 NLKDLWLDGNQLTEIPQEVGNLKNLLCLDVSEN--KLECLPEEISGLTSLTDLLVSQNLL 202

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLV 188
             LPD IG LR+L  L ++ N L+
Sbjct: 203 QVLPDGIGKLRRLSILKVDQNKLI 226



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 100/184 (54%), Gaps = 5/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +   L N++ LDV  N+L+CLP  I  L+ L  L VS NLL+ LP  I   R L  
Sbjct: 159 IPQEV-GNLKNLLCLDVSENKLECLPEEISGLTSLTDLLVSQNLLQVLPDGIGKLRRLSI 217

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + NKL QL D+IG +  +L  L +  N++  LP+S+  L  L  L+A  N L SLP+
Sbjct: 218 LKVDQNKLIQLTDSIG-DCESLTELVLTENQLQSLPKSIGRLKKLNNLNADRNKLTSLPK 276

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++    +L V ++  N   L  +P  I     L  LDV+ N++  LP S+  L KL+ L 
Sbjct: 277 EIGGCCSLNVFSVRDN--RLSRIPSEISQAAELHVLDVAGNRLMYLPLSLTTL-KLKALW 333

Query: 182 LEGN 185
           L  N
Sbjct: 334 LSDN 337



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 110/198 (55%), Gaps = 5/198 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L+ +  L +  N+++ LP  I    +L  LD+S N +  +P++I  CR+L+  + + N 
Sbjct: 4   QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCRALQVADFSGNP 63

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L +LP++   EL NL  LS+N   +  LP+++ +L +L  L+ R N L  LPE L  L  
Sbjct: 64  LTRLPESFP-ELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQR 122

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           LE L++  N  Y   LP +IG L +L +L +  N++T +P  +G L+ L  L +  N L 
Sbjct: 123 LEELDLGNNELY--HLPETIGALFNLKDLWLDGNQLTEIPQEVGNLKNLLCLDVSENKLE 180

Query: 189 SPPMDVVEQGLSAVKGYL 206
             P ++   GL+++   L
Sbjct: 181 CLPEEI--SGLTSLTDLL 196



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 73/163 (44%), Gaps = 48/163 (29%)

Query: 78  FELINLKTLSINCNKIVIL-----------------------PQSLTHLTSLRVLD---- 110
           F+L+ L+ L ++ N+I  L                       P+S++   +L+V D    
Sbjct: 3   FQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCRALQVADFSGN 62

Query: 111 ------------ARLNC-------LKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLL 151
                         L C       L++LPE++ NL NL  L + +N   L  LP S+  L
Sbjct: 63  PLTRLPESFPELQNLTCLSVNDISLQALPENIGNLYNLASLELRENL--LTYLPESLAQL 120

Query: 152 MSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             L ELD+  N++  LP++IG L  L+ L L+GN L   P +V
Sbjct: 121 QRLEELDLGNNELYHLPETIGALFNLKDLWLDGNQLTEIPQEV 163


>gi|456971318|gb|EMG11957.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 267

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 101/178 (56%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L  + VL++  NQ   LP  IG L  L+ LD+ GN   SLPK I   ++L  LN   N
Sbjct: 60  GQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGN 119

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L  L+ L+++ N+  I P+ +    SL+ L    + LK+LP+++  L 
Sbjct: 120 QLTSLPKEIG-QLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQ 178

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ L++  N   L +LP  IG L SL EL++  NK+ TLP  IG L+ LQ L L  N
Sbjct: 179 NLQSLHLDSN--QLTSLPKEIGQLQSLFELNLQDNKLKTLPKEIGQLQNLQVLRLYSN 234



 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 113/195 (57%), Gaps = 4/195 (2%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L++  NQL  LP  IG L KL+VL+++GN   SLPK I   ++LE L+ + N+   
Sbjct: 41  NLEKLNLDGNQLTTLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTS 100

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ L++  N++  LP+ +  L  L  L+   N     P+++    +L+ 
Sbjct: 101 LPKEIG-QLQNLRVLNLAGNQLTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKW 159

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +S +   L+TLP  I LL +L  L +  N++T+LP  IG L+ L +L+L+ N L + P
Sbjct: 160 LRLSGD--QLKTLPKEILLLQNLQSLHLDSNQLTSLPKEIGQLQSLFELNLQDNKLKTLP 217

Query: 192 MDVVE-QGLSAVKGY 205
            ++ + Q L  ++ Y
Sbjct: 218 KEIGQLQNLQVLRLY 232



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 39/61 (63%)

Query: 134 ISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMD 193
           IS     LE+LP  IGL  +L +L++  N++TTLP  IG L+KL+ L+L GN   S P +
Sbjct: 22  ISMGLHELESLPRVIGLFQNLEKLNLDGNQLTTLPKEIGQLQKLRVLNLAGNQFTSLPKE 81

Query: 194 V 194
           +
Sbjct: 82  I 82


>gi|455790003|gb|EMF41899.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 428

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 111/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD++ N+L  LP  IG L  L+ L +S N L +LP+      +L+ELN + N
Sbjct: 114 GKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLGNLQELNLSDN 173

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+TL++  N++  L + +  L +L+ L+   N L +LP ++  L 
Sbjct: 174 QLTTLPQEIG-QLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQ 232

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  LN+S N   L  L   +G L +L  L++S N++TTLP  IG L+ L  L+L GN L
Sbjct: 233 NLHTLNLSDN--QLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQL 290

Query: 188 VSPPMDV 194
            + P+++
Sbjct: 291 TTLPIEI 297



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 105/184 (57%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           LNV VLD+       LP  I  L  L+ L +  N L++LPK I   ++L+ELN + N+L 
Sbjct: 48  LNVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLT 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG +L NL+ L +  N++ ILP  +  L +L+ L    N L +LP +   L NL+
Sbjct: 108 ILPKEIG-KLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLGNLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+S N   L TLP  IG L +L  L++  N++TTL   I  L+ LQ L+L  N L + 
Sbjct: 167 ELNLSDN--QLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTL 224

Query: 191 PMDV 194
           P+++
Sbjct: 225 PIEI 228



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 109/186 (58%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L++  NQL  LP  IG L  L  L++S N L  L   +   ++L  LN + N+
Sbjct: 207 QLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQ 266

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG +L NL TL+++ N++  LP  +  L +L+ L+   N L +L +++E L N
Sbjct: 267 LTTLPIEIG-KLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKN 325

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L++S  +  L  LP  IG L +L EL++  N++T LP  IG L+ LQ LSL  N L+
Sbjct: 326 LQTLSLS--YNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLM 383

Query: 189 SPPMDV 194
           + P ++
Sbjct: 384 TFPKEI 389



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/180 (38%), Positives = 104/180 (57%), Gaps = 3/180 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L +  N+LK LP  IG L  L+ L++S N L  LPK I    +L+ L+   N+
Sbjct: 69  KLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNR 128

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG +L NL+TL ++ N++  LP+    L +L+ L+   N L +LP+++  L N
Sbjct: 129 LTILPIEIG-KLQNLQTLYLSSNQLTTLPRESGKLGNLQELNLSDNQLTTLPQEIGQLQN 187

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ LN+  N   L TL   I  L +L  L++S N++TTLP  IG L+ L  L+L  N L 
Sbjct: 188 LQTLNLKSN--QLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLA 245



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 106/202 (52%), Gaps = 4/202 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  NQL  L   +G L  L  L++S N L +LP  I   ++L  LN + N
Sbjct: 229 GKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGN 288

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L+++ N++  L + +  L +L+ L    N L  LP+++  L 
Sbjct: 289 QLTTLPIEIG-KLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQ 347

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEG-NP 186
           NL+ LN+  N   L  LP  IG L +L  L +  N++ T P  IG L+ LQ L L G N 
Sbjct: 348 NLQELNLWNN--QLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHNQ 405

Query: 187 LVSPPMDVVEQGLSAVKGYLSE 208
             S   + + + L   K Y  +
Sbjct: 406 FSSEEKERIRKLLPNCKIYFGD 427



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 59/99 (59%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +  ++RVLD       +LP+ +E L NL+ L +  N   L+TLP  IG L +L 
Sbjct: 40  LTKALQNPLNVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDN--RLKTLPKEIGQLKNLQ 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           EL++S N++T LP  IG L  LQ+L L  N L   P+++
Sbjct: 98  ELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEI 136


>gi|418726603|ref|ZP_13285214.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960513|gb|EKO24267.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 405

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/182 (39%), Positives = 108/182 (59%), Gaps = 3/182 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD++ N+L  LP  IG L  L+ L +S N L +LP+      +L+ELN + N
Sbjct: 114 GKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDN 173

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+TL++  N++  L + +  L +L+ L+   N L +LP ++  L 
Sbjct: 174 QLTTLPQEIG-QLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQ 232

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  LN+S N   L TLP  IG L +L  L++S N++TTL   IG L+ LQ L+L  N L
Sbjct: 233 NLHTLNLSDN--QLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQL 290

Query: 188 VS 189
            +
Sbjct: 291 TT 292



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 114/208 (54%), Gaps = 24/208 (11%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L +  N+LK LP  IG L  L+ L++S N L  LPK I    +L+ L+   N+
Sbjct: 69  KLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNR 128

Query: 69  LRQLPDTIG----------------------FELINLKTLSINCNKIVILPQSLTHLTSL 106
           L  LP  IG                       +L NL+ L+++ N++  LPQ +  L +L
Sbjct: 129 LTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNL 188

Query: 107 RVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITT 166
           + L+ + N L +L +++E L NL+ LN+S N   L TLP  IG L +L  L++S N++TT
Sbjct: 189 QTLNLKSNQLTTLFKEIEQLKNLQTLNLSDN--QLTTLPIEIGKLQNLHTLNLSDNQLTT 246

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           LP  IG L+ L  L+L GN L +  +++
Sbjct: 247 LPIEIGKLQNLHTLNLSGNQLTTLSIEI 274



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 105/184 (57%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           ++V VLD+       LP  I  L  L+ L +  N L++LPK I   ++L+ELN + N+L 
Sbjct: 48  MDVRVLDLSGQNFTTLPKEIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLT 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG +L NL+ L +  N++ ILP  +  L +L+ L    N L +LP +   L NL+
Sbjct: 108 ILPKEIG-KLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+S N   L TLP  IG L +L  L++  N++TTL   I  L+ LQ L+L  N L + 
Sbjct: 167 ELNLSDN--QLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTL 224

Query: 191 PMDV 194
           P+++
Sbjct: 225 PIEI 228



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/193 (36%), Positives = 114/193 (59%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L N+  L++ SNQL  L   I  L  L+ L++S N L +LP  I   ++L  
Sbjct: 178 LPQEI-GQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHT 236

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N+L  LP  IG +L NL TL+++ N++  L   +  L +L+ L+   N L +L +
Sbjct: 237 LNLSDNQLTTLPIEIG-KLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSK 295

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++E L NL+ L++S  +  L  LP  IG L +L EL++  N++T LP  IG L+ LQ LS
Sbjct: 296 EIEQLKNLQTLSLS--YNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLS 353

Query: 182 LEGNPLVSPPMDV 194
           L  N L++ P ++
Sbjct: 354 LYKNRLMTFPKEI 366



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 106/201 (52%), Gaps = 4/201 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L++  NQL  LP  IG L  L  L++S N L +LP  I   ++L  LN + N+
Sbjct: 207 QLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQ 266

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  L   IG +L NL+ L+++ N++  L + +  L +L+ L    N L  LP+++  L N
Sbjct: 267 LTTLSIEIG-KLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQN 325

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEG-NPL 187
           L+ LN+  N   L  LP  IG L +L  L +  N++ T P  IG L+ LQ L L G N  
Sbjct: 326 LQELNLWNN--QLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHNQF 383

Query: 188 VSPPMDVVEQGLSAVKGYLSE 208
            S   + + + L   K Y  +
Sbjct: 384 SSEEKERIRKLLPNCKIYFGD 404



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 59/99 (59%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVLD       +LP+++E L NL+ L +  N   L+TLP  IG L +L 
Sbjct: 40  LTKALQNPMDVRVLDLSGQNFTTLPKEIEKLKNLQKLYLFDN--RLKTLPKEIGQLKNLQ 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           EL++S N++T LP  IG L  LQ+L L  N L   P+++
Sbjct: 98  ELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEI 136


>gi|62079263|ref|NP_001014290.1| leucine-rich repeat-containing protein 1 [Rattus norvegicus]
 gi|50925909|gb|AAH79423.1| Leucine rich repeat containing 1 [Rattus norvegicus]
          Length = 524

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/214 (36%), Positives = 117/214 (54%), Gaps = 23/214 (10%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 120 LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 179 LDLGNNEIYSLPESIGA-LLHLKDLWLDGNQLSELPQEIGNLRNLLCLDVSENRLERLPE 237

Query: 122 DLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELDVS 160
           ++  LI+L  L +SQN                        L  LP +IG   +L EL ++
Sbjct: 238 EISGLISLTDLVVSQNLLETVPDGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLT 297

Query: 161 YNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N++ TLP SIG L+KL  L+ + N LVS P ++
Sbjct: 298 ENRLLTLPTSIGKLKKLNNLNADRNKLVSLPKEI 331



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 108/195 (55%), Gaps = 7/195 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   AR L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L
Sbjct: 27  VPEEIYRYARSLEELLLD--ANQLRELPEQFFQLVKLRKLGLSDNEVQRLPPEIANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP+S   L +L  L      L+SL
Sbjct: 85  VELDVSRNDIPEIPESISF-CKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++ NL NL  L + +N   L  LP S+  L  L ELD+  N+I +LP+SIG L  L+ 
Sbjct: 144 PENIGNLYNLASLELRENL--LTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALLHLKD 201

Query: 180 LSLEGNPLVSPPMDV 194
           L L+GN L   P ++
Sbjct: 202 LWLDGNQLSELPQEI 216



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 98/184 (53%), Gaps = 3/184 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L+V D SGN L  LP++    ++L  L+ N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDI 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD   N + SLPE +  L+
Sbjct: 139 SLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALL 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L +  N   L  LP  IG L +L+ LDVS N++  LP+ I  L  L  L +  N L
Sbjct: 198 HLKDLWLDGN--QLSELPQEIGNLRNLLCLDVSENRLERLPEEISGLISLTDLVVSQNLL 255

Query: 188 VSPP 191
            + P
Sbjct: 256 ETVP 259



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/193 (36%), Positives = 104/193 (53%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+SLT +L  +  LD+ +N++  LP SIG L  LK L + GN L  LP+ I N R+L  
Sbjct: 166 LPDSLT-QLRRLEELDLGNNEIYSLPESIGALLHLKDLWLDGNQLSELPQEIGNLRNLLC 224

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L +LP+ I   LI+L  L ++ N +  +P  +  L  L +L    N L  LPE
Sbjct: 225 LDVSENRLERLPEEISG-LISLTDLVVSQNLLETVPDGIGKLKKLSILKLDQNRLTQLPE 283

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + +  NL  L +++N   L TLP SIG L  L  L+   NK+ +LP  IG    L    
Sbjct: 284 AIGDCENLTELVLTEN--RLLTLPTSIGKLKKLNNLNADRNKLVSLPKEIGGCCSLTVFC 341

Query: 182 LEGNPLVSPPMDV 194
           +  N L   P +V
Sbjct: 342 IRDNRLTRIPSEV 354



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/188 (37%), Positives = 101/188 (53%), Gaps = 7/188 (3%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N++ LDV  N+L+ LP  I  L  L  L VS NLLE++P  I   + L  L  + N+L
Sbjct: 219 LRNLLCLDVSENRLERLPEEISGLISLTDLVVSQNLLETVPDGIGKLKKLSILKLDQNRL 278

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            QLP+ IG +  NL  L +  N+++ LP S+  L  L  L+A  N L SLP+++    +L
Sbjct: 279 TQLPEAIG-DCENLTELVLTENRLLTLPTSIGKLKKLNNLNADRNKLVSLPKEIGGCCSL 337

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN---P 186
            V  I  N   L  +P  +   M L  LDV+ N++  LP S+  L KL+ L L  N   P
Sbjct: 338 TVFCIRDN--RLTRIPSEVSQAMELHVLDVAGNRLHHLPLSLTTL-KLKALWLSDNQSQP 394

Query: 187 LVSPPMDV 194
           L++   DV
Sbjct: 395 LLTFQTDV 402



 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 2/138 (1%)

Query: 57  RSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
           R +E ++     L  +P+ I     +L+ L ++ N++  LP+    L  LR L    N +
Sbjct: 12  RHVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEV 71

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + LP ++ N + L  L++S+N   +  +P SI    +L   D S N +T LP+S   L+ 
Sbjct: 72  QRLPPEIANFMQLVELDVSRN--DIPEIPESISFCKALQVADFSGNPLTRLPESFPELQN 129

Query: 177 LQKLSLEGNPLVSPPMDV 194
           L  LS+    L S P ++
Sbjct: 130 LTCLSVNDISLQSLPENI 147


>gi|417761946|ref|ZP_12409943.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|409942208|gb|EKN87828.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
          Length = 305

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 110/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD++ N+L  LP  IG L  L+ L +S N L +LP+      +L+ELN + N
Sbjct: 14  GKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDN 73

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+TL++  N++  L + +  L +L+ L+   N L +LP ++  L 
Sbjct: 74  QLTTLPQEIG-QLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQ 132

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  LN+S N   L TLP  IG L +L  L++S N++TTL   IG L+ LQ L+L  N L
Sbjct: 133 NLHTLNLSDN--QLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQL 190

Query: 188 VSPPMDV 194
            +   ++
Sbjct: 191 TTLSKEI 197



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 107/177 (60%), Gaps = 3/177 (1%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           + SNQL  LP  IG L  L+ LD+  N L  LP  I   ++L+ L  + N+L  LP   G
Sbjct: 1   MSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESG 60

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
            +L NL+ L+++ N++  LPQ +  L +L+ L+ + N L +L +++E L NL+ LN+S N
Sbjct: 61  -KLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDN 119

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
              L TLP  IG L +L  L++S N++TTLP  IG L+ L  L+L GN L +  +++
Sbjct: 120 --QLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEI 174



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/193 (36%), Positives = 114/193 (59%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L N+  L++ SNQL  L   I  L  L+ L++S N L +LP  I   ++L  
Sbjct: 78  LPQEI-GQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHT 136

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N+L  LP  IG +L NL TL+++ N++  L   +  L +L+ L+   N L +L +
Sbjct: 137 LNLSDNQLTTLPIEIG-KLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSK 195

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++E L NL+ L++S  +  L  LP  IG L +L EL++  N++T LP  IG L+ LQ LS
Sbjct: 196 EIEQLKNLQTLSLS--YNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLS 253

Query: 182 LEGNPLVSPPMDV 194
           L  N L++ P ++
Sbjct: 254 LYKNRLMTFPKEI 266



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/176 (36%), Positives = 97/176 (55%), Gaps = 3/176 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L++  NQL  LP  IG L  L  L++S N L +LP  I   ++L  LN + N+
Sbjct: 107 QLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQ 166

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  L   IG +L NL+ L+++ N++  L + +  L +L+ L    N L  LP+++  L N
Sbjct: 167 LTTLSIEIG-KLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQN 225

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEG 184
           L+ LN+  N   L  LP  IG L +L  L +  N++ T P  IG L+ LQ L L G
Sbjct: 226 LQELNLWNN--QLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGG 279


>gi|440908498|gb|ELR58508.1| Protein LAP2 [Bos grunniens mutus]
          Length = 1412

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 106/183 (57%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LD+S N +E + + I  C +L++L  + N L+QLP+TIG  L
Sbjct: 217 NRLTFIPGFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLPETIG-SL 275

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  L S+  LD   N L++LP  +  L N+       N  Y
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNELEALPSSIGQLTNIRTFAADHN--Y 333

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q L
Sbjct: 334 LQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQL 393

Query: 200 SAV 202
           +A+
Sbjct: 394 TAM 396



 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 110/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 VVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+S 
Sbjct: 235 LDISKNNI-----EMVEEGISG 251



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTA 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDISKNNIEMVEEGISGCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLVSIEELDCSFNEL 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  ++  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNIRTFAADHNYLQQLPPEI 341



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I    S+EEL+ +FN+L  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNELEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N++T + + N +  LP  +    ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 76/137 (55%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++ + L NV  L +  NQL  LP+SIG L  ++ LD S N LE+LP +I    ++ 
Sbjct: 267 QLPETIGS-LKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNELEALPSSIGQLTNIR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-SWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|225690587|ref|NP_001139520.1| leucine-rich repeat-containing protein 1 isoform 1 [Mus musculus]
 gi|50400985|sp|Q80VQ1.2|LRRC1_MOUSE RecName: Full=Leucine-rich repeat-containing protein 1
 gi|56270287|gb|AAH87542.1| Lrrc1 protein [Mus musculus]
 gi|74151056|dbj|BAE27656.1| unnamed protein product [Mus musculus]
 gi|148694402|gb|EDL26349.1| leucine rich repeat containing 1, isoform CRA_a [Mus musculus]
          Length = 524

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/214 (36%), Positives = 116/214 (54%), Gaps = 23/214 (10%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 120 LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 179 LDLGNNEIYNLPESIG-ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPE 237

Query: 122 DLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELDVS 160
           ++  L +L  L ISQN                        L  LP +IG   +L EL ++
Sbjct: 238 EISGLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLT 297

Query: 161 YNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N++ TLP SIG L+KL  L+ + N LVS P ++
Sbjct: 298 ENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI 331



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 107/195 (54%), Gaps = 7/195 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   AR L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L
Sbjct: 27  VPEEIYRYARSLEELLLD--ANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP+S   L +L  L      L+SL
Sbjct: 85  VELDVSRNDIPEIPESIAF-CKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++ NL NL  L + +N   L  LP S+  L  L ELD+  N+I  LP+SIG L  L+ 
Sbjct: 144 PENIGNLYNLASLELRENL--LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKD 201

Query: 180 LSLEGNPLVSPPMDV 194
           L L+GN L   P ++
Sbjct: 202 LWLDGNQLSELPQEI 216



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 3/184 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L+V D SGN L  LP++    ++L  L+ N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDI 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD   N + +LPE +  L+
Sbjct: 139 SLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALL 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L +  N   L  LP  IG L +L+ LDVS N++  LP+ I  L  L  L +  N L
Sbjct: 198 HLKDLWLDGN--QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLL 255

Query: 188 VSPP 191
            + P
Sbjct: 256 ETIP 259



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 104/188 (55%), Gaps = 7/188 (3%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N++ LDV  N+L+ LP  I  L+ L  L +S NLLE++P+ I   + L  L  + N+L
Sbjct: 219 LKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRL 278

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            QLP+ IG +  NL  L +  N+++ LP+S+  L  L  L+A  N L SLP+++    +L
Sbjct: 279 TQLPEAIG-DCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSL 337

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN---P 186
            +  I  N   L  LP  +   + L  LDV+ N++  LP S+  L KL+ L L  N   P
Sbjct: 338 TMFCIRDN--RLTRLPAEVSQAVELHVLDVAGNRLHHLPLSLTTL-KLKALWLSDNQSQP 394

Query: 187 LVSPPMDV 194
           L++   D+
Sbjct: 395 LLTFQTDI 402



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 2/138 (1%)

Query: 57  RSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
           R +E ++     L  +P+ I     +L+ L ++ N++  LP+    L  LR L    N +
Sbjct: 12  RHVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + LP ++ N + L  L++S+N   +  +P SI    +L   D S N +T LP+S   L+ 
Sbjct: 72  QRLPPEIANFMQLVELDVSRN--DIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQN 129

Query: 177 LQKLSLEGNPLVSPPMDV 194
           L  LS+    L S P ++
Sbjct: 130 LTCLSVNDISLQSLPENI 147


>gi|418698174|ref|ZP_13259153.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410762878|gb|EKR29037.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 430

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 111/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD++ N+L  LP  IG L  L+ L +S N L +LP+      +L+ELN + N
Sbjct: 116 GKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLGNLQELNLSDN 175

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+TL++  N++  L + +  L +L+ L+   N L +LP ++  L 
Sbjct: 176 QLTTLPQEIG-QLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQ 234

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  LN+S N   L  L   +G L +L  L++S N++TTLP  IG L+ L  L+L GN L
Sbjct: 235 NLHTLNLSDN--QLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQL 292

Query: 188 VSPPMDV 194
            + P+++
Sbjct: 293 TTLPIEI 299



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 109/186 (58%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L++  NQL  LP  IG L  L  L++S N L  L   +   ++L  LN + N+
Sbjct: 209 QLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQ 268

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG +L NL TL+++ N++  LP  +  L +L+ L+   N L +L +++E L N
Sbjct: 269 LTTLPIEIG-KLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKN 327

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L++S  +  L  LP  IG L +L EL++  N++T LP  IG L+ LQ LSL  N L+
Sbjct: 328 LQTLSLS--YNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLM 385

Query: 189 SPPMDV 194
           + P ++
Sbjct: 386 TFPKEI 391



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 105/184 (57%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           LNV +L++       LP  I  L  L+ L +  N L++LPK I   ++L+ELN + N+L 
Sbjct: 50  LNVRILNLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLT 109

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG +L NL+ L +  N++ ILP  +  L +L+ L    N L +LP +   L NL+
Sbjct: 110 ILPKEIG-KLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLGNLQ 168

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+S N   L TLP  IG L +L  L++  N++TTL   I  L+ LQ L+L  N L + 
Sbjct: 169 ELNLSDN--QLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTL 226

Query: 191 PMDV 194
           P+++
Sbjct: 227 PIEI 230



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/180 (38%), Positives = 104/180 (57%), Gaps = 3/180 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L +  N+LK LP  IG L  L+ L++S N L  LPK I    +L+ L+   N+
Sbjct: 71  QLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNR 130

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG +L NL+TL ++ N++  LP+    L +L+ L+   N L +LP+++  L N
Sbjct: 131 LTILPIEIG-KLQNLQTLYLSSNQLTTLPRESGKLGNLQELNLSDNQLTTLPQEIGQLQN 189

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ LN+  N   L TL   I  L +L  L++S N++TTLP  IG L+ L  L+L  N L 
Sbjct: 190 LQTLNLKSN--QLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLA 247



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/177 (36%), Positives = 97/177 (54%), Gaps = 3/177 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++  NQL  L   +G L  L  L++S N L +LP  I   ++L  LN + N
Sbjct: 231 GKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGN 290

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L+++ N++  L + +  L +L+ L    N L  LP+++  L 
Sbjct: 291 QLTTLPIEIG-KLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQ 349

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEG 184
           NL+ LN+  N   L  LP  IG L +L  L +  N++ T P  IG L+ LQ L L G
Sbjct: 350 NLQELNLWNN--QLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGG 404



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 60/99 (60%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +  ++R+L+       +LP+++E L NL+ L +  N   L+TLP  IG L +L 
Sbjct: 42  LTKALQNPLNVRILNLSGQNFTTLPKEIEQLKNLQKLYLFDN--RLKTLPKEIGQLKNLQ 99

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           EL++S N++T LP  IG L  LQ+L L  N L   P+++
Sbjct: 100 ELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEI 138


>gi|444709489|gb|ELW50501.1| Leucine-rich repeat protein SHOC-2 [Tupaia chinensis]
          Length = 535

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 111/196 (56%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+   L  +  L ++SN+L+ LP  +GCL  L  L +S N L SLP +++N + L 
Sbjct: 113 ILPTSI-KELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLR 171

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKLR++P  + + L +L TL +  N+I  + + + +L  L +L  R N +K LP
Sbjct: 172 MLDLRHNKLREIPSVV-YRLDSLTTLYLRFNRITTVEKDIKNLPKLIMLSIRENKIKQLP 230

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG    +  LD+ +N++  LPD+IG L  L +L
Sbjct: 231 AEIGELCNLITLDVAHN--QLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLCSLNRL 288

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N L + P  + +
Sbjct: 289 GLRYNRLSAIPRSLAK 304



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 104/187 (55%), Gaps = 12/187 (6%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +++L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  +  L+   N+L  L
Sbjct: 216 LIMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDL 275

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEV 131
           PDTIG  L +L  L +  N++  +P+SL   ++L  L+   N + +LPE  L +L+ L  
Sbjct: 276 PDTIG-NLCSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNS 334

Query: 132 LNISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNP 186
           L +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N 
Sbjct: 335 LTLARNCFQL-----YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQ 389

Query: 187 LVSPPMD 193
           L S P+D
Sbjct: 390 LTSLPLD 396



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 101/222 (45%), Gaps = 50/222 (22%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N+L  LP++IG L  L  L +  N L ++P+++  C +LEELN   N +  L
Sbjct: 262 ITNLDLQHNELLDLPDTIGNLCSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTL 321

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+++   L+ L +L++  NC                                        
Sbjct: 322 PESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLS 381

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N L  +PED+  LI+LE L ++ N   L TL
Sbjct: 382 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLISLEKLVLTNN--QLTTL 439

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           P  IG L +L  L +  N +T LP+ IG L  L++L L  NP
Sbjct: 440 PRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNP 481



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 7/162 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 356 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 413

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   LI+L+ L +  N++  LP+ + HLT+L  L    N L  LPE++  L NL
Sbjct: 414 TKIPEDVSG-LISLEKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENL 472

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           E L ++ N   L +LP+ + L   L  + +    ++ LP  I
Sbjct: 473 EELYLNDN-PNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 513



 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L ++   I ILP S+  LT L  L    N L+SLP ++  L+NL  L +S+N   L +LP
Sbjct: 104 LDLSKRSIHILPTSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLP 161

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            S+  L  L  LD+ +NK+  +P  +  L  L  L L  N + +   D+
Sbjct: 162 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 210


>gi|297294412|ref|XP_001088781.2| PREDICTED: protein LAP2 [Macaca mulatta]
          Length = 1418

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  
Sbjct: 275 LKNITTLKIDENQLIYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 111/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 VVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+SA
Sbjct: 235 LDVSKNNI-----EMVEEGISA 251



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLIYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  ++  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNIRTFAADHNYLQQLPPEI 341



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 94/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+ E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 244 MVEEGISA-CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLIYLPDSIGGLISVE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP +IG +L N++T + + N +  LP  +    ++ VL    N L++LP
Sbjct: 303 ELDCSFNEVEALPSSIG-QLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402


>gi|440799708|gb|ELR20752.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 722

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 107/180 (59%), Gaps = 6/180 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++ L+ + LD   NQL  LP  IG L +L  L V+GN+L++LP  I +C SLE L+   N
Sbjct: 214 SQCLSSLCLD--GNQLSELPPHIGILQRLVELSVNGNMLKTLPPAIGHCTSLETLSLKNN 271

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            +++LP  +G  L  L+ L ++ N +  LP  +   T L+VLDA    L+ LPE++ ++ 
Sbjct: 272 HIKKLPRELG-RLSKLEELHLSGNALSTLPAGIGGCTQLQVLDASWCRLERLPEEMAHVT 330

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  LN++ N   L  LP +IGL+  L++LD+S N +  LP S+G L   +  + + NPL
Sbjct: 331 SLIELNLAHN--NLTALPSAIGLMTRLIDLDISDNCLEDLPVSMG-LMNFKNFACDNNPL 387



 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 2/81 (2%)

Query: 114 NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGC 173
           N L  LP  +  L  L  L+++ N   L+TLP +IG   SL  L +  N I  LP  +G 
Sbjct: 225 NQLSELPPHIGILQRLVELSVNGNM--LKTLPPAIGHCTSLETLSLKNNHIKKLPRELGR 282

Query: 174 LRKLQKLSLEGNPLVSPPMDV 194
           L KL++L L GN L + P  +
Sbjct: 283 LSKLEELHLSGNALSTLPAGI 303


>gi|410948707|ref|XP_003981072.1| PREDICTED: LOW QUALITY PROTEIN: protein LAP2 [Felis catus]
          Length = 1421

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 106/183 (57%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  L
Sbjct: 217 NRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIG-SL 275

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  Y
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLASIEELDCSFNEVEALPSSVGQLTNIRTFAADHN--Y 333

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q L
Sbjct: 334 LQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQL 393

Query: 200 SAV 202
           +A+
Sbjct: 394 TAM 396



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIV-ILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF  +         +  +  LP +   LT L++L+ R N LK L
Sbjct: 119 VVEASVNPISKLPD--GFSQLLNLXQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     +++E+G+SA
Sbjct: 235 LDVSKNNI-----EMIEEGISA 251



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 94/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           MI E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 244 MIEEGISA-CENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLASIE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP ++G +L N++T + + N +  LP  +    ++ VL    N L++LP
Sbjct: 303 ELDCSFNEVEALPSSVG-QLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 26/195 (13%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELIN 82
           L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N+  ++P+ +  +L  
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLE-QLSG 208

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARL-----------------------NCLKSL 119
           LK   ++ N++  +P  +  L  L  LD                          N L+ L
Sbjct: 209 LKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQL 268

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE + +L N+  L I +N   L  LP SIG L S+ ELD S+N++  LP S+G L  ++ 
Sbjct: 269 PETIGSLKNVTTLKIDEN--QLMYLPDSIGGLASIEELDCSFNEVEALPSSVGQLTNIRT 326

Query: 180 LSLEGNPLVSPPMDV 194
            + + N L   P ++
Sbjct: 327 FAADHNYLQQLPPEI 341



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLXQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L ++  F  LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYLNDAF--LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212


>gi|301767854|ref|XP_002919340.1| PREDICTED: protein LAP2-like isoform 1 [Ailuropoda melanoleuca]
          Length = 1420

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 106/183 (57%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  L
Sbjct: 217 NRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIG-SL 275

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  Y
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADHN--Y 333

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q L
Sbjct: 334 LQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQL 393

Query: 200 SAV 202
           +A+
Sbjct: 394 TAM 396



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 111/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 VVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     +++E+G+SA
Sbjct: 235 LDVSKNNI-----EMIEEGISA 251



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLVSIEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  ++  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNMRTFAADHNYLQQLPPEI 341



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 94/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           MI E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 244 MIEEGISA-CENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP +IG +L N++T + + N +  LP  +    ++ VL    N L++LP
Sbjct: 303 ELDCSFNEVEALPSSIG-QLTNMRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402


>gi|418702265|ref|ZP_13263176.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|418717513|ref|ZP_13277175.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|421116459|ref|ZP_15576844.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|421125803|ref|ZP_15586047.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421136751|ref|ZP_15596848.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410011919|gb|EKO70025.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410018933|gb|EKO85761.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410436455|gb|EKP85567.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410758784|gb|EKR25010.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410787110|gb|EKR80845.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|455790756|gb|EMF42603.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 315

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 102/183 (55%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V  LD+ +  L  L   IG L  L+ L++  N L +LP+ I   R+L+ L  +FN+   
Sbjct: 54  DVRQLDLAAKGLTTLLKEIGKLRNLQKLNLGSNRLTTLPEEIAQLRNLQRLQLSFNQFTT 113

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  I ++L NL+ L +N N++  LP+ +     L+ L    N L +LP+++  L NLE+
Sbjct: 114 LPKEI-WQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLRLDNNQLANLPQEITQLQNLEL 172

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +S N   L TLP  I  L SL  L V  N+ TT P+ I  L+KLQ L L GN L + P
Sbjct: 173 LFLSGN--RLTTLPEEIAQLRSLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLP 230

Query: 192 MDV 194
            ++
Sbjct: 231 KEI 233



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 110/199 (55%), Gaps = 3/199 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  LD++ N+L  LP  I    KL+ L +  N L +LP+ I   ++LE L  + N+
Sbjct: 120 QLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLRLDNNQLANLPQEITQLQNLELLFLSGNR 179

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP+ I  +L +L+ L +  N+    P+ +T L  L+ LD   N L +LP+++  L N
Sbjct: 180 LTTLPEEIA-QLRSLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQN 238

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L++  N   L  LP  I  L +L  L +S N++TTLP  IG L+ LQ L L+GNP+V
Sbjct: 239 LKALHLGGN--QLAILPEEITQLQNLQTLILSGNQLTTLPKEIGRLQNLQTLILKGNPIV 296

Query: 189 SPPMDVVEQGLSAVKGYLS 207
           S     ++Q L     Y  
Sbjct: 297 SKERQRIQQLLPKCTIYFE 315



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/189 (35%), Positives = 104/189 (55%), Gaps = 3/189 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++ SN+L  LP  I  L  L+ L +S N   +LPK I   ++L+ L+ N N
Sbjct: 73  GKLRNLQKLNLGSNRLTTLPEEIAQLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDN 132

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ I  +   L+ L ++ N++  LPQ +T L +L +L    N L +LPE++  L 
Sbjct: 133 RLTTLPEEIA-QFQKLQWLRLDNNQLANLPQEITQLQNLELLFLSGNRLTTLPEEIAQLR 191

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L +  N     T P  I  L  L  LD+  N++TTLP  IG L+ L+ L L GN L
Sbjct: 192 SLQRLYVYGN--RFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQL 249

Query: 188 VSPPMDVVE 196
              P ++ +
Sbjct: 250 AILPEEITQ 258



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 105/193 (54%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE + A+L N+  L +  NQ   LP  I  L  L+ LD++ N L +LP+ I   + L+ 
Sbjct: 91  LPEEI-AQLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQW 149

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+L  LP  I  +L NL+ L ++ N++  LP+ +  L SL+ L    N   + PE
Sbjct: 150 LRLDNNQLANLPQEIT-QLQNLELLFLSGNRLTTLPEEIAQLRSLQRLYVYGNRFTTFPE 208

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L  L+ L++  N   L TLP  IG L +L  L +  N++  LP+ I  L+ LQ L 
Sbjct: 209 EITQLQKLQGLDLGGN--QLTTLPKEIGRLQNLKALHLGGNQLAILPEEITQLQNLQTLI 266

Query: 182 LEGNPLVSPPMDV 194
           L GN L + P ++
Sbjct: 267 LSGNQLTTLPKEI 279



 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 65/115 (56%), Gaps = 2/115 (1%)

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           +++ L +    +  L + +  L +L+ L+   N L +LPE++  L NL+ L +S  F   
Sbjct: 54  DVRQLDLAAKGLTTLLKEIGKLRNLQKLNLGSNRLTTLPEEIAQLRNLQRLQLS--FNQF 111

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
            TLP  I  L +L  LD++ N++TTLP+ I   +KLQ L L+ N L + P ++ +
Sbjct: 112 TTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLRLDNNQLANLPQEITQ 166



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 65/108 (60%), Gaps = 2/108 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE + A+L ++  L V+ N+    P  I  L KL+ LD+ GN L +LPK I   ++L+ 
Sbjct: 183 LPEEI-AQLRSLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKA 241

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           L+   N+L  LP+ I  +L NL+TL ++ N++  LP+ +  L +L+ L
Sbjct: 242 LHLGGNQLAILPEEIT-QLQNLQTLILSGNQLTTLPKEIGRLQNLQTL 288



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 2/93 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
            PE +T +L  +  LD+  NQL  LP  IG L  LK L + GN L  LP+ I   ++L+ 
Sbjct: 206 FPEEIT-QLQKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAILPEEITQLQNLQT 264

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
           L  + N+L  LP  IG  L NL+TL +  N IV
Sbjct: 265 LILSGNQLTTLPKEIG-RLQNLQTLILKGNPIV 296


>gi|195443980|ref|XP_002069663.1| GK11454 [Drosophila willistoni]
 gi|261277889|sp|B4N9T4.1|SUR8_DROWI RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|194165748|gb|EDW80649.1| GK11454 [Drosophila willistoni]
          Length = 641

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/176 (37%), Positives = 104/176 (59%), Gaps = 3/176 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L ++SN++  LP  IGCL  L+ L ++ N L SLP ++++C  L+ L+   NKL ++P  
Sbjct: 188 LYLYSNKIGQLPTEIGCLVNLRNLALNENSLTSLPDSLQHCNQLKVLDLRHNKLAEIPPV 247

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           I + L +L TL +  N+I  +   L  L +L +L  R N ++ L   +  L+NL  L++S
Sbjct: 248 I-YRLRSLTTLYLRFNRITTVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVS 306

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            N  +LE LP  IG  ++L  LD+ +N++  +PDSIG L+ L +L L  N L S P
Sbjct: 307 HN--HLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGLRYNRLTSVP 360



 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/182 (36%), Positives = 105/182 (57%), Gaps = 3/182 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L+N+  L ++ N L  LP+S+   ++LKVLD+  N L  +P  I   RSL  L   FN++
Sbjct: 205 LVNLRNLALNENSLTSLPDSLQHCNQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRI 264

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             + D +  +L+NL  LS+  NKI  L  ++  L +L  LD   N L+ LPED+ N +NL
Sbjct: 265 TTVADDL-RQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNL 323

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
             L++  N   L  +P SIG L SLV L + YN++T++P S+   + + + ++EGN +  
Sbjct: 324 SALDLQHN--ELLDIPDSIGNLKSLVRLGLRYNRLTSVPASLKNCKSMDEFNVEGNGITQ 381

Query: 190 PP 191
            P
Sbjct: 382 LP 383



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 97/161 (60%), Gaps = 2/161 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           +N+V L++ +N L+ LP+ I  L  L++L +S N+L+ +P TI N R L  L+   N++ 
Sbjct: 462 VNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIE 521

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG  L  L+ L +  N+I +LP+S+ HL+ L  L    N L+ LPE++ +L +LE
Sbjct: 522 VLPHEIGL-LHELQRLILQTNQITMLPRSIGHLSQLTHLSVSENNLQFLPEEIGSLESLE 580

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
            L I+QN   LE LP+ + L  +L  L++    ++T+P  I
Sbjct: 581 NLYINQN-PGLEKLPFELALCQNLKYLNIDKCPLSTIPPEI 620



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 109/261 (41%), Gaps = 73/261 (27%)

Query: 5   SLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVS-----------GNL-------- 45
           S    L+N+  LDV  N L+ LP  IG    L  LD+            GNL        
Sbjct: 292 SAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGL 351

Query: 46  ----LESLPKTIENCRSLEELNANFNKLRQLPDTI-----GFELINLK------------ 84
               L S+P +++NC+S++E N   N + QLPD +     G  +I L             
Sbjct: 352 RYNRLTSVPASLKNCKSMDEFNVEGNGITQLPDGMLASLNGLTIITLSRNQFTSYPTGGP 411

Query: 85  -------------------------------TLSINCNKIVILPQSLTHLTSLRVLDARL 113
                                           L++  N +  LP  +    ++  L+   
Sbjct: 412 AQFTNVYNINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLAT 471

Query: 114 NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGC 173
           N L+ LP+D+ NL NLE+L +S N   L+ +P +IG L  L  LD+  N+I  LP  IG 
Sbjct: 472 NALQKLPDDIMNLQNLEILILSNNM--LKKIPNTIGNLRKLRILDLEENRIEVLPHEIGL 529

Query: 174 LRKLQKLSLEGNPLVSPPMDV 194
           L +LQ+L L+ N +   P  +
Sbjct: 530 LHELQRLILQTNQITMLPRSI 550



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 104/188 (55%), Gaps = 4/188 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L+N+ +L +  N+++ L ++IG L  L  LDVS N LE LP+ I NC +L  L+   N+
Sbjct: 273 QLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNE 332

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLI 127
           L  +PD+IG  L +L  L +  N++  +P SL +  S+   +   N +  LP+  L +L 
Sbjct: 333 LLDIPDSIG-NLKSLVRLGLRYNRLTSVPASLKNCKSMDEFNVEGNGITQLPDGMLASLN 391

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNP 186
            L ++ +S+N Q+            ++  +++ +N+I  +P  I    K L KL+++ N 
Sbjct: 392 GLTIITLSRN-QFTSYPTGGPAQFTNVYNINLEHNRIDKIPYGIFSRAKGLTKLNMKENM 450

Query: 187 LVSPPMDV 194
           L + P+D+
Sbjct: 451 LTALPLDI 458



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 4/206 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP  + +R   +  L++  N L  LP  IG    +  L+++ N L+ LP  I N ++LE 
Sbjct: 430 IPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEI 489

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+++P+TIG  L  L+ L +  N+I +LP  +  L  L+ L  + N +  LP 
Sbjct: 490 LILSNNMLKKIPNTIG-NLRKLRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPR 548

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYN-KITTLPDSIGCLRKLQKL 180
            + +L  L  L++S+N   L+ LP  IG L SL  L ++ N  +  LP  +   + L+ L
Sbjct: 549 SIGHLSQLTHLSVSEN--NLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQNLKYL 606

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYL 206
           +++  PL + P ++   G S V  +L
Sbjct: 607 NIDKCPLSTIPPEIQAGGPSLVLQWL 632



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 74/150 (49%), Gaps = 26/150 (17%)

Query: 36  LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           +K LD+S + +  +P T++ C  L EL    NK+ QLP  IG  L+NL+ L++N N    
Sbjct: 162 IKRLDLSKSSITVIPNTVKECVHLTELYLYSNKIGQLPTEIGC-LVNLRNLALNENS--- 217

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
                               L SLP+ L++   L+VL++  N   L  +P  I  L SL 
Sbjct: 218 --------------------LTSLPDSLQHCNQLKVLDLRHN--KLAEIPPVIYRLRSLT 255

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            L + +N+ITT+ D +  L  L  LSL  N
Sbjct: 256 TLYLRFNRITTVADDLRQLVNLTMLSLREN 285



 Score = 37.0 bits (84), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 2/112 (1%)

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           +K L ++ + I ++P ++     L  L    N +  LP ++  L+NL   N++ N   L 
Sbjct: 162 IKRLDLSKSSITVIPNTVKECVHLTELYLYSNKIGQLPTEIGCLVNLR--NLALNENSLT 219

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +LP S+     L  LD+ +NK+  +P  I  LR L  L L  N + +   D+
Sbjct: 220 SLPDSLQHCNQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITTVADDL 271


>gi|158286480|ref|XP_308777.4| AGAP006993-PA [Anopheles gambiae str. PEST]
 gi|157020488|gb|EAA04662.4| AGAP006993-PA [Anopheles gambiae str. PEST]
          Length = 626

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/201 (37%), Positives = 109/201 (54%), Gaps = 5/201 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L+ +  LDV  N +  LP  +G L +L+ L +S N L  LP  I N R L++L+   N L
Sbjct: 183 LIMLETLDVSFNSINALPGGVGFLVRLQQLTLSNNHLTELPNDIVNLRKLQKLDLAKNDL 242

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDL-ENLIN 128
           ++LP  +G EL  L+   +  N I  LP   T   +L+ L    N +K+LP D  ENL  
Sbjct: 243 KKLPPVMG-ELRRLECFYVQHNDIDELP-DFTGCEALKELHISNNYIKTLPGDFCENLPQ 300

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+VL++  N   +E LP  I LL SL  LD+S N I++LP  +  L  L  L +EGNP+ 
Sbjct: 301 LKVLDLRDN--KIEKLPDEIALLASLTRLDLSNNTISSLPSCLSTLAHLVSLQVEGNPIR 358

Query: 189 SPPMDVVEQGLSAVKGYLSEK 209
           S   D+++ G   +   L E+
Sbjct: 359 SIRRDIIQCGTQRILKTLRER 379



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/158 (37%), Positives = 84/158 (53%), Gaps = 4/158 (2%)

Query: 36  LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           L  LD+S N L ++ + I+N   L  LN   N L  LP  IG  L  L   S+  NK+  
Sbjct: 94  LTSLDLSSNTLTTISENIQNLVDLTVLNLQDNALTSLPAGIG-ALTKLTKFSVARNKLTE 152

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           LP+S   L  L+ L+   N    +  ++ +LI LE L++S  F  +  LP  +G L+ L 
Sbjct: 153 LPESFFQLKELKHLNLSHNEFAEMNPNISDLIMLETLDVS--FNSINALPGGVGFLVRLQ 210

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS-PPM 192
           +L +S N +T LP+ I  LRKLQKL L  N L   PP+
Sbjct: 211 QLTLSNNHLTELPNDIVNLRKLQKLDLAKNDLKKLPPV 248



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 93/176 (52%), Gaps = 3/176 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+ SN L  +  +I  L  L VL++  N L SLP  I     L + +   NKL +LP++
Sbjct: 97  LDLSSNTLTTISENIQNLVDLTVLNLQDNALTSLPAGIGALTKLTKFSVARNKLTELPES 156

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
             F+L  LK L+++ N+   +  +++ L  L  LD   N + +LP  +  L+ L+ L +S
Sbjct: 157 F-FQLKELKHLNLSHNEFAEMNPNISDLIMLETLDVSFNSINALPGGVGFLVRLQQLTLS 215

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            N  +L  LP  I  L  L +LD++ N +  LP  +G LR+L+   ++ N +   P
Sbjct: 216 NN--HLTELPNDIVNLRKLQKLDLAKNDLKKLPPVMGELRRLECFYVQHNDIDELP 269



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 93/174 (53%), Gaps = 3/174 (1%)

Query: 39  LDVSGNLLESLPKTIENCRSL-EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILP 97
           +D+S N L ++P  I +  SL  ELN +FN L+ +P     +   +  L+++ N++  LP
Sbjct: 452 VDISKNKLTAVPSGITHLSSLLTELNVSFNLLQTVPAFFS-QFDKISYLNLSNNQMTDLP 510

Query: 98  QSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN-FQYLETLPYSIGLLMSLVE 156
           + +  L +LR L+   N LK +P+ +  L  LE+L  S N  + ++     +G L  L  
Sbjct: 511 EVVGLLVTLRELNVISNQLKRIPDCVYELRGLEILLASGNQIEEIDATESGLGALKRLAT 570

Query: 157 LDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKM 210
           LD++ N I  +P  +G L+ +  L L GN    P   ++E+G  ++  YL +++
Sbjct: 571 LDLANNNIKHVPPVLGTLKNITTLELIGNSFRQPRHQILEKGTESIMSYLRDRI 624



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 74/141 (52%), Gaps = 3/141 (2%)

Query: 55  NCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLN 114
           N RSL  L+ + N L  + + I   L++L  L++  N +  LP  +  LT L       N
Sbjct: 90  NQRSLTSLDLSSNTLTTISENIQ-NLVDLTVLNLQDNALTSLPAGIGALTKLTKFSVARN 148

Query: 115 CLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCL 174
            L  LPE    L  L+ LN+S N ++ E  P +I  L+ L  LDVS+N I  LP  +G L
Sbjct: 149 KLTELPESFFQLKELKHLNLSHN-EFAEMNP-NISDLIMLETLDVSFNSINALPGGVGFL 206

Query: 175 RKLQKLSLEGNPLVSPPMDVV 195
            +LQ+L+L  N L   P D+V
Sbjct: 207 VRLQQLTLSNNHLTELPNDIV 227



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 108/252 (42%), Gaps = 60/252 (23%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENC------RSLEE 61
           A L ++  LD+ +N +  LP+ +  L+ L  L V GN + S+ + I  C      ++L E
Sbjct: 319 ALLASLTRLDLSNNTISSLPSCLSTLAHLVSLQVEGNPIRSIRRDIIQCGTQRILKTLRE 378

Query: 62  LN-------------------------------ANFNKLRQL----------------PD 74
            +                               + F  + Q+                P+
Sbjct: 379 RDGTGKPDGGQKGVARAAASASTAVVKNSLFTESTFPDVYQMRKGRALIVCSKALVDIPE 438

Query: 75  TIGFELINLKTLSINCNK--IVILPQSLTHLTSLRV-LDARLNCLKSLPEDLENLINLEV 131
            +  + +     +++ +K  +  +P  +THL+SL   L+   N L+++P        +  
Sbjct: 439 AVFLDALEACVYNVDISKNKLTAVPSGITHLSSLLTELNVSFNLLQTVPAFFSQFDKISY 498

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LN+S N   +  LP  +GLL++L EL+V  N++  +PD +  LR L+ L   GN +    
Sbjct: 499 LNLSNN--QMTDLPEVVGLLVTLRELNVISNQLKRIPDCVYELRGLEILLASGNQI--EE 554

Query: 192 MDVVEQGLSAVK 203
           +D  E GL A+K
Sbjct: 555 IDATESGLGALK 566



 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 100/252 (39%), Gaps = 60/252 (23%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P      L  + VLD+  N+++ LP+ I  L+ L  LD+S N + SLP  +     L  
Sbjct: 290 LPGDFCENLPQLKVLDLRDNKIEKLPDEIALLASLTRLDLSNNTISSLPSCLSTLAHLVS 349

Query: 62  LNANFNKLRQLPDTI---GFELINLKTLS------------------------------- 87
           L    N +R +   I   G + I LKTL                                
Sbjct: 350 LQVEGNPIRSIRRDIIQCGTQRI-LKTLRERDGTGKPDGGQKGVARAAASASTAVVKNSL 408

Query: 88  ------------------INCNKIVILPQSLTHLTSLRV----LDARLNCLKSLPEDLEN 125
                             I C+K ++       L +L      +D   N L ++P  + +
Sbjct: 409 FTESTFPDVYQMRKGRALIVCSKALVDIPEAVFLDALEACVYNVDISKNKLTAVPSGITH 468

Query: 126 LIN-LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEG 184
           L + L  LN+S  F  L+T+P        +  L++S N++T LP+ +G L  L++L++  
Sbjct: 469 LSSLLTELNVS--FNLLQTVPAFFSQFDKISYLNLSNNQMTDLPEVVGLLVTLRELNVIS 526

Query: 185 NPLVSPPMDVVE 196
           N L   P  V E
Sbjct: 527 NQLKRIPDCVYE 538


>gi|359321003|ref|XP_003639483.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 1 [Canis lupus familiaris]
          Length = 524

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 111/193 (57%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 120 LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 179 LDLGNNEIYNLPESIG-ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPE 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L  L ISQN   LE +P  IG L  L  L V  N++T LP+++G    L +L 
Sbjct: 238 EISGLTSLTDLVISQNL--LEMIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELV 295

Query: 182 LEGNPLVSPPMDV 194
           L  N L++ P  +
Sbjct: 296 LTENQLLTLPKSI 308



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 106/195 (54%), Gaps = 7/195 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +    R L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L
Sbjct: 27  VPEEIYRYXRFLEELLLD--ANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP+S   L +L  L      L+SL
Sbjct: 85  VELDVSRNDIPEIPESISF-CKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++ NL NL  L + +N   L  LP S+  L  L ELD+  N+I  LP+SIG L  L+ 
Sbjct: 144 PENIGNLYNLASLELRENL--LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKD 201

Query: 180 LSLEGNPLVSPPMDV 194
           L L+GN L   P ++
Sbjct: 202 LWLDGNQLSELPQEI 216



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 86/250 (34%), Positives = 119/250 (47%), Gaps = 32/250 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP++    ++L  L+ N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDI 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD--------------ARL 113
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD              A L
Sbjct: 139 SLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALL 197

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L  LP+++ NL NL  L++S+N   LE LP  I  L SL +L +S N +
Sbjct: 198 HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN--RLERLPEEISGLTSLTDLVISQNLL 255

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVG 224
             +PD IG L+KL  L ++ N L   P + V    S  +  L+E  N     PK    +G
Sbjct: 256 EMIPDGIGKLKKLSILKVDQNRLTQLP-EAVGDCESLTELVLTE--NQLLTLPKS---IG 309

Query: 225 KLVKYGTFNG 234
           KL K    N 
Sbjct: 310 KLKKLSNLNA 319



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 114/225 (50%), Gaps = 11/225 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+ A LL++  L +  NQL  LP  IG L  L  LDVS N LE LP+ I    SL +
Sbjct: 189 LPESIGA-LLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTD 247

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L  +PD IG +L  L  L ++ N++  LP+++    SL  L    N L +LP+
Sbjct: 248 LVISQNLLEMIPDGIG-KLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPK 306

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L  L  LN  +N   L +LP  IG   SL    V  N++T LP  +    +L  L 
Sbjct: 307 SIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRLPAEVSQATELHVLD 364

Query: 182 LEGNPLVSPPMDVVEQGLSAV-------KGYLSEKMNNDHKSPKK 219
           + GN L+  P+ +    L A+       +  L+ + + DH + +K
Sbjct: 365 VAGNRLLHLPLSLTALKLKALWLSDNQSQPLLTFQTDTDHTTGEK 409



 Score = 43.9 bits (102), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 2/138 (1%)

Query: 57  RSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
           R  E ++     L  +P+ I      L+ L ++ N++  LP+    L  LR L    N +
Sbjct: 12  RHXETIDKRHCSLVYVPEEIYRYXRFLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + LP ++ N + L  L++S+N   +  +P SI    +L   D S N +T LP+S   L+ 
Sbjct: 72  QRLPPEIANFMQLVELDVSRN--DIPEIPESISFCKALQIADFSGNPLTRLPESFPELQN 129

Query: 177 LQKLSLEGNPLVSPPMDV 194
           L  LS+    L S P ++
Sbjct: 130 LTCLSVNDISLQSLPENI 147


>gi|359462280|ref|ZP_09250843.1| leucine-rich repeat-containing protein [Acaryochloris sp. CCMEE
           5410]
          Length = 1235

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/195 (35%), Positives = 112/195 (57%), Gaps = 4/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L N++ L +  NQL  +P  IG L+ L  L +SGN L  +PK I    +L +
Sbjct: 35  VPKEI-GQLTNLIALSLSGNQLTEVPKEIGKLTNLIALSLSGNQLTEVPKEIGKLANLTQ 93

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+L ++P+ IG +L +L  LS+  N++  +P+ +  L +L  L    N L  +P+
Sbjct: 94  LRLHQNRLTEVPEEIG-QLASLTELSLFQNQLTEVPKEIGQLINLTELYLSQNQLMKIPK 152

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           DLE LI+L  L +SQN   L   P  +G L++L+EL +S N++T +P   G L  L KL+
Sbjct: 153 DLERLISLTKLYLSQN--QLTEAPKELGKLINLMELYLSQNQLTEVPKEFGQLTSLIKLN 210

Query: 182 LEGNPLVSPPMDVVE 196
           L  N L   P ++ E
Sbjct: 211 LSQNRLTGVPQELGE 225



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 104/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L+N++ L +  NQL  +P   G L+ L  L++S N L  +P+ +   +SL EL+ + N
Sbjct: 178 GKLINLMELYLSQNQLTEVPKEFGQLTSLIKLNLSQNRLTGVPQELGELKSLTELHLSQN 237

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL ++P  +G +L NL  L I+ N++  +P+ +  LT L  L    N LK +P++L  L 
Sbjct: 238 KLMEVPKELG-KLTNLTWLHIDQNQLTEIPEEIGQLTKLTELSLSHNQLKEVPKELGQLA 296

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L   ++SQN Q +E +P  IG +  L+ L +  N++T +P  +  L  L +L L  N L
Sbjct: 297 RLTRFSLSQN-QLIE-IPKEIGKIAKLIWLRIDQNQLTEVPRELSQLVNLTRLHLHQNQL 354

Query: 188 VSPPMDV 194
              P ++
Sbjct: 355 TKIPKEL 361



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 110/232 (47%), Gaps = 23/232 (9%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE +  +L  +  L +  NQLK +P  +G L++L    +S N L  +PK I     L  
Sbjct: 265 IPEEI-GQLTKLTELSLSHNQLKEVPKELGQLARLTRFSLSQNQLIEIPKEIGKIAKLIW 323

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+L ++P  +  +L+NL  L ++ N++  +P+ L  +T L  L    N L  +P+
Sbjct: 324 LRIDQNQLTEVPRELS-QLVNLTRLHLHQNQLTKIPKELGKVTKLTELSLSQNQLIEVPK 382

Query: 122 DLENLINLEVLNISQN---------------------FQYLETLPYSIGLLMSLVELDVS 160
           +L  LINL  L ++QN                     +  L  +P  +G L SL ELD+ 
Sbjct: 383 ELGQLINLVELRLNQNQLTKVPKELGKLTNLTRLHLSYNKLIEVPKELGKLASLRELDLD 442

Query: 161 YNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNN 212
            N++T +P  +G L KL  L L  N L        EQGL     YL  +  N
Sbjct: 443 QNQLTKVPKELGKLAKLVILDLSNNSLNPELSAAYEQGLETFFAYLQAQDEN 494



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 101/186 (54%), Gaps = 3/186 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A+ +    LD+ S +L  +P  IG L+ L  L +SGN L  +PK I    +L  L+ + N
Sbjct: 17  AKRIAAPTLDLCSLKLTEVPKEIGQLTNLIALSLSGNQLTEVPKEIGKLTNLIALSLSGN 76

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L ++P  IG +L NL  L ++ N++  +P+ +  L SL  L    N L  +P+++  LI
Sbjct: 77  QLTEVPKEIG-KLANLTQLRLHQNRLTEVPEEIGQLASLTELSLFQNQLTEVPKEIGQLI 135

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L +SQN   L  +P  +  L+SL +L +S N++T  P  +G L  L +L L  N L
Sbjct: 136 NLTELYLSQN--QLMKIPKDLERLISLTKLYLSQNQLTEAPKELGKLINLMELYLSQNQL 193

Query: 188 VSPPMD 193
              P +
Sbjct: 194 TEVPKE 199



 Score = 40.4 bits (93), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 31/54 (57%)

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L  +P  IG L +L+ L +S N++T +P  IG L  L  LSL GN L   P ++
Sbjct: 32  LTEVPKEIGQLTNLIALSLSGNQLTEVPKEIGKLTNLIALSLSGNQLTEVPKEI 85


>gi|338718176|ref|XP_001918318.2| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 1 [Equus caballus]
          Length = 524

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/216 (37%), Positives = 117/216 (54%), Gaps = 27/216 (12%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 120 LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L +LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 179 LDLGNNEIYNLPESIG-ALFHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPE 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLM-----------------------SLVELD 158
           ++  L +L  L ISQN   LET+P  IG L                        SL EL 
Sbjct: 238 EISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLAQLPEAVGDCESLTELV 295

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           ++ N++ TLP SIG L+KL  L+ + N LVS P ++
Sbjct: 296 LTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI 331



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 107/195 (54%), Gaps = 7/195 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   AR L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L
Sbjct: 27  VPEEIYRYARSLEELLLD--ANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP+S   L +L  L      L+SL
Sbjct: 85  VELDVSRNDIPEIPESISF-CKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++ NL NL  L + +N   L  LP S+  L  L ELD+  N+I  LP+SIG L  L+ 
Sbjct: 144 PENIGNLYNLASLELRENL--LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALFHLKD 201

Query: 180 LSLEGNPLVSPPMDV 194
           L L+GN L   P ++
Sbjct: 202 LWLDGNQLSELPQEI 216



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/250 (34%), Positives = 118/250 (47%), Gaps = 32/250 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP++    ++L  L+ N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDI 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD----------------- 110
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD                 
Sbjct: 139 SLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALF 197

Query: 111 ------ARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L  LP+++ NL NL  L++S+N   LE LP  I  L SL +L +S N +
Sbjct: 198 HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN--RLERLPEEISGLTSLTDLVISQNLL 255

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVG 224
            T+PD IG L+KL  L ++ N L   P + V    S  +  L+E  N     PK    +G
Sbjct: 256 ETIPDGIGKLKKLSILKVDQNRLAQLP-EAVGDCESLTELVLTE--NRLLTLPKS---IG 309

Query: 225 KLVKYGTFNG 234
           KL K    N 
Sbjct: 310 KLKKLSNLNA 319



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 103/193 (53%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+SLT +L  +  LD+ +N++  LP SIG L  LK L + GN L  LP+ I N ++L  
Sbjct: 166 LPDSLT-QLRRLEELDLGNNEIYNLPESIGALFHLKDLWLDGNQLSELPQEIGNLKNLLC 224

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L +LP+ I   L +L  L I+ N +  +P  +  L  L +L    N L  LPE
Sbjct: 225 LDVSENRLERLPEEISG-LTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLAQLPE 283

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + +  +L  L +++N   L TLP SIG L  L  L+   NK+ +LP  IG    L    
Sbjct: 284 AVGDCESLTELVLTEN--RLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCGLTVFC 341

Query: 182 LEGNPLVSPPMDV 194
           +  N L   P +V
Sbjct: 342 VRDNRLTRIPAEV 354



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 95/176 (53%), Gaps = 4/176 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N++ LDV  N+L+ LP  I  L+ L  L +S NLLE++P  I   + L  L  + N+L
Sbjct: 219 LKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRL 278

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            QLP+ +G +  +L  L +  N+++ LP+S+  L  L  L+A  N L SLP+++     L
Sbjct: 279 AQLPEAVG-DCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCGL 337

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            V  +  N   L  +P  +     L  LDV+ N++  LP S+  L KL+ L L  N
Sbjct: 338 TVFCVRDN--RLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTTL-KLKALWLSDN 390



 Score = 46.6 bits (109), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 2/138 (1%)

Query: 57  RSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
           R +E ++     L  +P+ I     +L+ L ++ N++  LP+    L  LR L    N +
Sbjct: 12  RHVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + LP ++ N + L  L++S+N   +  +P SI    +L   D S N +T LP+S   L+ 
Sbjct: 72  QRLPPEIANFMQLVELDVSRN--DIPEIPESISFCKALQIADFSGNPLTRLPESFPELQN 129

Query: 177 LQKLSLEGNPLVSPPMDV 194
           L  LS+    L S P ++
Sbjct: 130 LTCLSVNDISLQSLPENI 147


>gi|260788660|ref|XP_002589367.1| hypothetical protein BRAFLDRAFT_77813 [Branchiostoma floridae]
 gi|229274544|gb|EEN45378.1| hypothetical protein BRAFLDRAFT_77813 [Branchiostoma floridae]
          Length = 762

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 120/234 (51%), Gaps = 26/234 (11%)

Query: 5   SLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNA 64
           S    L N+ VL V +N++   P  +  L+KL+ L ++GN L  +P  + +  +LE+L+ 
Sbjct: 443 SRVCSLPNLEVLTVGNNKVSTFPPGVEKLTKLRELYINGNQLTEVPSGVCSLPNLEKLSV 502

Query: 65  NFNKLRQLPDTIGFELINLKTLSI-NCN----------------------KIVILPQSLT 101
             N +R+LPD +   L  LK LS+ NC                       K  ++P  + 
Sbjct: 503 GGNPIRRLPDDVT-RLARLKALSVPNCQFDEFPRQVLQLKTLEVLYAGGCKFDMVPDEVG 561

Query: 102 HLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSY 161
           +L  L  L    N L++LP  + +L NL V+ +++N    +T P  +  L ++ +LD+S 
Sbjct: 562 NLQHLCYLSLEYNLLRTLPSTMSHLHNLRVVRLNKN--KFDTFPEVLCELPAMEKLDISN 619

Query: 162 NKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHK 215
           N IT LP ++    KL+ L + GNPL  PP DV EQG  A+  +L ++ + + K
Sbjct: 620 NNITRLPTALHRADKLRDLDVSGNPLAYPPQDVCEQGTGAIMAFLKQEADKEKK 673



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 104/193 (53%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE +   + ++  LDV +N+L  +P +IG L KL  LD +GN+L SLP+ I + + L++
Sbjct: 27  IPEEV-FDITDLEALDVSNNKLTSIPEAIGRLQKLYRLDANGNMLTSLPQAISSLQGLKQ 85

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L +LPD +  +L NL+ L +  NK+  LP  +    +L   DA  N L + P 
Sbjct: 86  LYVHSNNLSELPDGLE-DLQNLEWLWVKDNKLKKLPTKIFSCLNLVNFDASNNNLSTFPP 144

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +E L  +  L I  N   L  +P  +  L +L  L V  NK++T P  +  L+KL+ L 
Sbjct: 145 GVEKLQKVRELRIYGN--QLTEVPSGVCSLPNLELLSVGNNKLSTFPPGVEKLQKLRILY 202

Query: 182 LEGNPLVSPPMDV 194
           + GN L   P  V
Sbjct: 203 IYGNQLTEVPRGV 215



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 94/186 (50%), Gaps = 5/186 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+ +L V +N+L   P  +  L KL++L + GN L  +P+ + +  +LE L AN NK 
Sbjct: 172 LPNLELLSVGNNKLSTFPPGVEKLQKLRILYIYGNQLTEVPRGVCSLSNLESLEANGNKF 231

Query: 70  RQLPDTIGFE-LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
              P  +G E L  L  L I+ N++  +P  +  L +L VLD   N L + P  +E L  
Sbjct: 232 STFP--LGVEKLQKLTRLLIHDNQLTEVPSGVCSLPNLEVLDVGNNKLFTFPPGVEKLQK 289

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L  L I  N   L  +P  +  L +L  L V  NK++T P  +  L+KL KL +  N L 
Sbjct: 290 LRELYIYGN--QLTEVPSGVRSLPNLEVLSVVNNKLSTFPPGVEKLQKLTKLGINDNQLT 347

Query: 189 SPPMDV 194
             P  V
Sbjct: 348 EVPSGV 353



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 90/179 (50%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+ +  L  +P  +  ++ L+ LDVS N L S+P+ I   + L  L+AN N L  LP  
Sbjct: 17  LDLSNQGLTSIPEEVFDITDLEALDVSNNKLTSIPEAIGRLQKLYRLDANGNMLTSLPQA 76

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           I   L  LK L ++ N +  LP  L  L +L  L  + N LK LP  + + +NL   + S
Sbjct: 77  IS-SLQGLKQLYVHSNNLSELPDGLEDLQNLEWLWVKDNKLKKLPTKIFSCLNLVNFDAS 135

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L T P  +  L  + EL +  N++T +P  +  L  L+ LS+  N L + P  V
Sbjct: 136 NN--NLSTFPPGVEKLQKVRELRIYGNQLTEVPSGVCSLPNLELLSVGNNKLSTFPPGV 192



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 88/177 (49%), Gaps = 3/177 (1%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           +H NQL  +P+ +  L  L+VLDV  N L + P  +E  + L EL    N+L ++P  + 
Sbjct: 249 IHDNQLTEVPSGVCSLPNLEVLDVGNNKLFTFPPGVEKLQKLRELYIYGNQLTEVPSGVR 308

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
             L NL+ LS+  NK+   P  +  L  L  L    N L  +P  + +L NLE+L +  N
Sbjct: 309 -SLPNLEVLSVVNNKLSTFPPGVEKLQKLTKLGINDNQLTEVPSGVCSLPNLELLVVGNN 367

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
              L T P  +  L  L EL +  N++T +P  +  L  L+ L +  N L + P  V
Sbjct: 368 M--LSTFPPGVEKLQKLRELRIYGNQLTEVPPGVCSLPNLEVLHVYNNKLSTFPPGV 422



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 94/186 (50%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L  + +L ++ NQL  +P  +  LS L+ L+ +GN   + P  +E  + L  L  + N+
Sbjct: 194 KLQKLRILYIYGNQLTEVPRGVCSLSNLESLEANGNKFSTFPLGVEKLQKLTRLLIHDNQ 253

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L ++P  +   L NL+ L +  NK+   P  +  L  LR L    N L  +P  + +L N
Sbjct: 254 LTEVPSGV-CSLPNLEVLDVGNNKLFTFPPGVEKLQKLRELYIYGNQLTEVPSGVRSLPN 312

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           LEVL++  N   L T P  +  L  L +L ++ N++T +P  +  L  L+ L +  N L 
Sbjct: 313 LEVLSVVNN--KLSTFPPGVEKLQKLTKLGINDNQLTEVPSGVCSLPNLELLVVGNNMLS 370

Query: 189 SPPMDV 194
           + P  V
Sbjct: 371 TFPPGV 376



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+ VLDV +N+L   P  +  L KL+ L + GN L  +P  + +  +LE L+   NKL
Sbjct: 264 LPNLEVLDVGNNKLFTFPPGVEKLQKLRELYIYGNQLTEVPSGVRSLPNLEVLSVVNNKL 323

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
              P  +  +L  L  L IN N++  +P  +  L +L +L    N L + P  +E L  L
Sbjct: 324 STFPPGVE-KLQKLTKLGINDNQLTEVPSGVCSLPNLELLVVGNNMLSTFPPGVEKLQKL 382

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
             L I  N   L  +P  +  L +L  L V  NK++T P  +  L+KL++L +  N L  
Sbjct: 383 RELRIYGN--QLTEVPPGVCSLPNLEVLHVYNNKLSTFPPGVEKLQKLRELRIHDNQLTE 440

Query: 190 PPMDV 194
            P  V
Sbjct: 441 VPSRV 445



 Score = 44.3 bits (103), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 5/66 (7%)

Query: 139 QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQG 198
           Q L ++P  +  +  L  LDVS NK+T++P++IG L+KL +L   GN L S P     Q 
Sbjct: 22  QGLTSIPEEVFDITDLEALDVSNNKLTSIPEAIGRLQKLYRLDANGNMLTSLP-----QA 76

Query: 199 LSAVKG 204
           +S+++G
Sbjct: 77  ISSLQG 82


>gi|418694701|ref|ZP_13255735.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|409957466|gb|EKO16373.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
          Length = 425

 Score =  101 bits (251), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 119/222 (53%), Gaps = 24/222 (10%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL +++NQ+  LPN I  L KL+ L +S N L +LPK IE  ++L+ L+ ++N
Sbjct: 206 GQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYN 265

Query: 68  KLRQLPDTIGF----------------------ELINLKTLSINCNKIVILPQSLTHLTS 105
           + + +P  IG                       +L NL+TL ++ N++ ILPQ +  L +
Sbjct: 266 QFKIIPKEIGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKN 325

Query: 106 LRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
           L  L    N L +LP ++E L NL+VLN   N   + TL   IG L +L  L ++ N++T
Sbjct: 326 LLWLSLVYNQLTTLPNEIEQLKNLQVLNFGSN--QITTLSQEIGQLQNLKVLFLNNNQLT 383

Query: 166 TLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLS 207
           TLP  IG L+ L+KL L  + L S   + + + L   + Y  
Sbjct: 384 TLPKEIGQLKNLKKLYLNNHQLSSEEKERIRKLLPKCQIYFE 425



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +H NQL  LP  I  L  L++L +  N L +LPK IE  ++L+ L+   N
Sbjct: 68  GQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSN 127

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L ++ N++  L + +  L +L+ LD   N L +LP ++E L 
Sbjct: 128 QLTVLPQEIE-QLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLK 186

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +S+N     T P  IG L +L  L ++ N+IT LP+ I  L+KLQ L L  N L
Sbjct: 187 NLKSLYLSEN--QFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQL 244

Query: 188 VSPPMDV 194
           ++ P ++
Sbjct: 245 ITLPKEI 251



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/210 (36%), Positives = 109/210 (51%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLP----------------NSIGCLSK-------LKVLDVSGN 44
            +L N+ VLD+ SNQL  LP                N +  LSK       LK LD+S N
Sbjct: 114 EQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNN 173

Query: 45  LLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLT 104
            L +LP  IE  ++L+ L  + N+    P  IG +L NLK L +N N+I ILP  +  L 
Sbjct: 174 QLTTLPNEIEQLKNLKSLYLSENQFATFPKEIG-QLQNLKVLFLNNNQITILPNEIAKLK 232

Query: 105 SLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
            L+ L    N L +LP+++E L NL+ L++S N    + +P  IG L +L  LD+  N++
Sbjct: 233 KLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYN--QFKIIPKEIGQLENLQTLDLRNNQL 290

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            TLP  I  L+ LQ L L  N L   P ++
Sbjct: 291 KTLPKEIEQLKNLQTLFLSNNQLTILPQEI 320



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 104/186 (55%), Gaps = 3/186 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++   +LK LP  IG L  L+ L +  N L  LP+ IE  ++L+ L    N+L 
Sbjct: 48  LDVRVLELSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLT 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  I  +L NL+ L +  N++ +LPQ +  L +L++L    N L +L +D+E L NL+
Sbjct: 108 TLPKEIE-QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLK 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++S N   L TLP  I  L +L  L +S N+  T P  IG L+ L+ L L  N +   
Sbjct: 167 SLDLSNN--QLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 224

Query: 191 PMDVVE 196
           P ++ +
Sbjct: 225 PNEIAK 230



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 94/169 (55%), Gaps = 4/169 (2%)

Query: 40  DVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQS 99
           +V     + L K ++N   +  L  +  +L+ LP  IG +L NL+ L ++ N++ +LPQ 
Sbjct: 31  EVEPGTYKDLTKALQNPLDVRVLELSRQELKTLPIEIG-QLKNLQRLYLHYNQLTVLPQE 89

Query: 100 LTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDV 159
           +  L +L++L  R N L +LP+++E L NL+VL++  N   L  LP  I  L +L  L +
Sbjct: 90  IEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSN--QLTVLPQEIEQLKNLQLLYL 147

Query: 160 SYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSE 208
             N++TTL   I  L+ L+ L L  N L + P + +EQ  +    YLSE
Sbjct: 148 HSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNE-IEQLKNLKSLYLSE 195


>gi|29791785|gb|AAH50692.1| ERBB2IP protein, partial [Homo sapiens]
          Length = 633

 Score =  101 bits (251), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 108/186 (58%), Gaps = 4/186 (2%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           + +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG
Sbjct: 214 MDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG 273

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
             L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N
Sbjct: 274 -SLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN 332

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE- 196
             YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + 
Sbjct: 333 --YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 197 QGLSAV 202
           Q L+A+
Sbjct: 391 QQLTAM 396



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 106/190 (55%), Gaps = 10/190 (5%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L  + A+ N + +LPD 
Sbjct: 74  LSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPD- 132

Query: 76  IGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            GF +L+NL  L +N   +  LP +   LT L++L+ R N LK LP+ +  L  LE L++
Sbjct: 133 -GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDL 191

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N ++ E +P  +  L  L E  +  N++T +P  IG L++L  L +  N +     ++
Sbjct: 192 GSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EM 244

Query: 195 VEQGLSAVKG 204
           VE+G+S  + 
Sbjct: 245 VEEGISTCEN 254



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  L+  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+EEL+ +FN++  
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEA 313

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +IG +L NL+T + + N +  LP  +    ++ VL    N L++LPE++ ++  L+V
Sbjct: 314 LPSSIG-QLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKV 372

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           +N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 373 INLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 2/136 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE++   L N+  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    +L  
Sbjct: 268 LPETI-GSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRT 326

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
             A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP 
Sbjct: 327 FAADHNYLQQLPPEIG-SWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPF 385

Query: 122 DLENLINLEVLNISQN 137
               L  L  + +S N
Sbjct: 386 SFTKLQQLTAMWLSDN 401


>gi|301767858|ref|XP_002919342.1| PREDICTED: protein LAP2-like isoform 3 [Ailuropoda melanoleuca]
          Length = 1302

 Score =  101 bits (251), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 106/183 (57%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  L
Sbjct: 217 NRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIG-SL 275

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  Y
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADHN--Y 333

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q L
Sbjct: 334 LQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQL 393

Query: 200 SAV 202
           +A+
Sbjct: 394 TAM 396



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 106/187 (56%), Gaps = 10/187 (5%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L  + A+ N + +LPD 
Sbjct: 74  LSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPD- 132

Query: 76  IGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            GF +L+NL  L +N   +  LP +   LT L++L+ R N LK LP+ +  L  LE L++
Sbjct: 133 -GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDL 191

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N ++ E +P  +  L  L E  +  N++T +P  IG L++L  L +  N +     ++
Sbjct: 192 GSN-EFTE-VPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNI-----EM 244

Query: 195 VEQGLSA 201
           +E+G+SA
Sbjct: 245 IEEGISA 251



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLVSIEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  ++  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNMRTFAADHNYLQQLPPEI 341



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 94/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           MI E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 244 MIEEGISA-CENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP +IG +L N++T + + N +  LP  +    ++ VL    N L++LP
Sbjct: 303 ELDCSFNEVEALPSSIG-QLTNMRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402


>gi|418712107|ref|ZP_13272852.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|421116140|ref|ZP_15576529.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410012306|gb|EKO70408.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410791374|gb|EKR85050.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 358

 Score =  101 bits (251), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 107/184 (58%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL +   +LK LP  IG L  L++LD+S N L  LPK I   ++L+EL  N+N+ +
Sbjct: 27  LDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQFK 86

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
             P  I  +L +L  L ++ N++ ILP  +  L +L+ L+   N LK++ +++E L NL+
Sbjct: 87  TFPKEIE-QLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQ 145

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +  N   L   P  IG L +L  L +S N++TT P  IG L+ LQ+L L  N L + 
Sbjct: 146 KLYLDNN--QLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTF 203

Query: 191 PMDV 194
           P ++
Sbjct: 204 PKEI 207



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 106/186 (56%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L + +NQL   P  IG L  LK L +S N L + PK I   ++L+EL  + N+
Sbjct: 140 QLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQ 199

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L   P  IG +L  L+ L +  N++  +P  +  L  L+ L+  +N L ++P+++  L N
Sbjct: 200 LTTFPKEIG-KLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQN 258

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+VL +S N    +T+P   G L +L  L +  N++T LP  IG L+ L+ L+L+ N L+
Sbjct: 259 LQVLFLSYN--QFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLI 316

Query: 189 SPPMDV 194
           + P ++
Sbjct: 317 TIPKEI 322



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 71/193 (36%), Positives = 111/193 (57%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L N+ +LD+  NQL  LP  I  L  L+ L ++ N  ++ PK IE  +SL +
Sbjct: 42  LPEKI-GQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQFKTFPKEIEQLKSLHK 100

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+L  LP  IG +L NL+ L++  N++  + + +  L +L+ L    N L + P+
Sbjct: 101 LYLSNNQLTILPVEIG-QLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPK 159

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L NL+ L +S N   L T P  IG L +L EL +S N++TT P  IG L+KLQ L 
Sbjct: 160 EIGKLQNLKSLFLSNN--QLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLG 217

Query: 182 LEGNPLVSPPMDV 194
           L  N L + P ++
Sbjct: 218 LGDNQLTTIPNEI 230



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 99/178 (55%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + +NQL   P  IG L  L+ L +S N L + PK I   + L+ L    N
Sbjct: 162 GKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDN 221

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P+ IG +L  L+ L+++ N++  +P+ +  L +L+VL    N  K++P +   L 
Sbjct: 222 QLTTIPNEIG-KLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLK 280

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL++L++  N   L  LP  IG L +L  L++  N++ T+P  IG L+ LQ L L  N
Sbjct: 281 NLKMLSLDAN--QLTALPKEIGKLKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNN 336



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 88/158 (55%), Gaps = 3/158 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + +NQL   P  IG L KL+ L +  N L ++P  I   + L+ELN + N
Sbjct: 185 GKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVN 244

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  IG +L NL+ L ++ N+   +P     L +L++L    N L +LP+++  L 
Sbjct: 245 QLTTIPKEIG-QLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLK 303

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
           NL++LN+  N   L T+P  IG L +L  L +  N+ +
Sbjct: 304 NLKMLNLDAN--QLITIPKEIGQLQNLQTLYLRNNQFS 339



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 2/94 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L N+ VL +  NQ K +P   G L  LK+L +  N L +LPK I   ++L+ 
Sbjct: 249 IPKEI-GQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKM 307

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           LN + N+L  +P  IG +L NL+TL +  N+  I
Sbjct: 308 LNLDANQLITIPKEIG-QLQNLQTLYLRNNQFSI 340


>gi|421117845|ref|ZP_15578200.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410010627|gb|EKO68763.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
          Length = 636

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 106/184 (57%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++   +L  LP  IG L  L+ L++  NLL +LPK I    +L+EL+   N+L 
Sbjct: 43  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 102

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
             P  I  EL  L++L ++ N+++ILP  +  L +L+ L    N L + P+++  L NL+
Sbjct: 103 TFPAVI-VELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGRLQNLQ 161

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L + +N   L T P  IG L +L +L +  NK+TT P  IG L+ LQKL L  N L + 
Sbjct: 162 DLGLYKN--KLTTFPKEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTAL 219

Query: 191 PMDV 194
           P ++
Sbjct: 220 PKEI 223



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/170 (38%), Positives = 95/170 (55%), Gaps = 3/170 (1%)

Query: 25  CLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLK 84
            LP  I  L  LK L +  N L+ +P  I   R+LE LN   N+L +LP  IG +L NL+
Sbjct: 431 TLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIG-QLRNLQ 489

Query: 85  TLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
            LS++ N + I P  +  L  L+ LD  +N   + P+++  L NL+ LN+ +N   L  L
Sbjct: 490 RLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN--QLTNL 547

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P  I  L +L ELD++ N+ T LP  IG L+KLQ L L  N L + P ++
Sbjct: 548 PAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 597



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 103/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  L ++ N+L   P  IG L  L+ L +  N L + PK I   ++L++L    N
Sbjct: 132 GRLQNLQDLGLYKNKLTTFPKEIGRLQNLQDLGLYKNKLTTFPKEIGRLQNLQDLGLYKN 191

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL   P  IG +L NL+ L ++ N++  LP+ +  L +L+ LD + N    LP+++  L 
Sbjct: 192 KLTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQ 250

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+  N   L TLP  IG L +L EL +  N++T LP  IG L+ LQ L    N L
Sbjct: 251 NLQTLNLQDN--QLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRL 308

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 309 TALPKEM 315



 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 103/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQL   P  I  L KL+ LD+S N L  LP  I   ++L++L    N
Sbjct: 86  GQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKN 145

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL   P  IG  L NL+ L +  NK+   P+ +  L +L+ L    N L + P+++  L 
Sbjct: 146 KLTTFPKEIG-RLQNLQDLGLYKNKLTTFPKEIGRLQNLQDLGLYKNKLTTFPKEIGQLQ 204

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +S+N   L  LP  IG L +L  LD+  N+ T LP  IG L+ LQ L+L+ N L
Sbjct: 205 NLQKLWLSEN--RLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQL 262

Query: 188 VSPPMDV 194
            + P+++
Sbjct: 263 ATLPVEI 269



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 102/178 (57%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +RL N+  L +  N LK +P+ IG L  L+ L++  N LE LPK I   R+L+ L+ + N
Sbjct: 437 SRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQN 496

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+  P  I  +L  L+ L ++ N+    P+ +  L +L+ L+ + N L +LP ++E L 
Sbjct: 497 TLKIFPAEIE-QLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLK 555

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ L+++ N      LP  IG L  L  LD+  N++TTLP  IG L+ LQ L L+ N
Sbjct: 556 NLQELDLNDN--QFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 611



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 103/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  L ++ N+L   P  IG L  L+ L +  N L + PK I   ++L++L  + N
Sbjct: 155 GRLQNLQDLGLYKNKLTTFPKEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSEN 214

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+TL +  N+  ILP+ +  L +L+ L+ + N L +LP ++  L 
Sbjct: 215 RLTALPKEIG-QLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 273

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +  N   L  LP  IG L +L  L    N++T LP  +G L+ LQ L+L  N L
Sbjct: 274 NLQELYLRNN--RLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRL 331

Query: 188 VSPPMDV 194
              P ++
Sbjct: 332 TVLPKEI 338



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 102/180 (56%), Gaps = 3/180 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  L ++ N+L   P  IG L  L+ L +S N L +LPK I   ++L+ L+   N
Sbjct: 178 GRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNN 237

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +   LP  IG +L NL+TL++  N++  LP  +  L +L+ L  R N L  LP+++  L 
Sbjct: 238 QFTILPKEIG-QLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQ 296

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L   +N   L  LP  +G L +L  L++  N++T LP  IG L+ LQ L L  NPL
Sbjct: 297 NLQMLCSPEN--RLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPL 354



 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/197 (35%), Positives = 105/197 (53%), Gaps = 9/197 (4%)

Query: 4   ESLTA------RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCR 57
           E LTA      +L N+  L++  N L  LP  IG L  L+ LD+  N L + P  I   +
Sbjct: 53  EKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQ 112

Query: 58  SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK 117
            LE L+ + N+L  LP+ IG  L NL+ L +  NK+   P+ +  L +L+ L    N L 
Sbjct: 113 KLESLDLSENRLIILPNEIG-RLQNLQDLGLYKNKLTTFPKEIGRLQNLQDLGLYKNKLT 171

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
           + P+++  L NL+ L + +N   L T P  IG L +L +L +S N++T LP  IG L+ L
Sbjct: 172 TFPKEIGRLQNLQDLGLYKN--KLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNL 229

Query: 178 QKLSLEGNPLVSPPMDV 194
           Q L L+ N     P ++
Sbjct: 230 QTLDLQNNQFTILPKEI 246



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/178 (34%), Positives = 99/178 (55%), Gaps = 8/178 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  N+L  LP  IG L  L+ LD+  N    LPK I   ++L+ LN   N
Sbjct: 201 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDN 260

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +  N++ +LP+ +  L +L++L +  N L +LP+++  L 
Sbjct: 261 QLATLPVEIG-QLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLK 319

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ LN+  N   L  LP  IG L +L +L++  N     P S+   +++QKL  + N
Sbjct: 320 NLQTLNLVNN--RLTVLPKEIGQLQNLQDLELLMN-----PLSLKERKRIQKLFPDSN 370



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 98/238 (41%), Gaps = 53/238 (22%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L    N+L  LP  +G L  L+ L++  N L  LPK I   ++L++L    N
Sbjct: 293 GQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMN 352

Query: 68  KL---------RQLPDT------------------------------------------I 76
            L         +  PD+                                          +
Sbjct: 353 PLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKV 412

Query: 77  GFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQ 136
             +  NL+ L +       LP+ ++ L +L+ L   LN LK +P ++  L NLE LN+  
Sbjct: 413 ILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEA 472

Query: 137 NFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           N   LE LP  IG L +L  L +  N +   P  I  L+KLQKL L  N   + P ++
Sbjct: 473 N--ELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEI 528



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L + L+N +++ VLN+S   + L  LP  IG L +L EL++ +N +TTLP  IG L  
Sbjct: 33  RDLTKALQNPLDVRVLNLS--GEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLEN 90

Query: 177 LQKLSLEGNPLVSPPMDVVE 196
           LQ+L L  N L + P  +VE
Sbjct: 91  LQELDLRDNQLATFPAVIVE 110



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVL+     L +LP+++  L NL+ LN+  N   L TLP  IG L +L 
Sbjct: 35  LTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNL--LTTLPKEIGQLENLQ 92

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           ELD+  N++ T P  I  L+KL+ L L  N L+  P ++
Sbjct: 93  ELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEI 131


>gi|440804214|gb|ELR25091.1| Leucinerich repeat protein lrrA, putative [Acanthamoeba castellanii
           str. Neff]
          Length = 507

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 83/247 (33%), Positives = 130/247 (52%), Gaps = 30/247 (12%)

Query: 2   IPESLTARLLNVVVLDVHSN-QLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +PE L   L ++V LD+ +N Q+  +P  IG L+ L+ LD+ GN L +LP  I N  +LE
Sbjct: 263 LPEDLCT-LPSIVELDLRNNLQIGRIPPEIGRLTTLRRLDLFGNKLTNLPAEIGNLVNLE 321

Query: 61  ELNANFNKL--RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKS 118
            L+   N L    +P  +G  L  L+ L ++ N +  LP  +  + +L+ LDA  N L S
Sbjct: 322 LLDLRQNSLAIELIPPELG-RLTRLERLLMSKNNLATLPAEIKTMYALKELDAANNVLLS 380

Query: 119 LPEDLENLINLEVLNISQN---------------------FQYLETLPYSIGLLMSLVEL 157
           +PE++  L NL+ LN+S N                        +  LP  +G L S+V++
Sbjct: 381 VPEEIGCLSNLQKLNVSGNRLLTLPPTIALLTALTKLDIKGNEIHELPSEVGELSSVVKI 440

Query: 158 DVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSP 217
           D+S+N +T LP  +G L KL+ + +  NPLV PP DV+ +G  AV  +L +    + K+ 
Sbjct: 441 DMSHNMMTNLPWELGSLPKLEVMDISHNPLVIPPPDVLNRGTPAVLAWLRK----NEKTG 496

Query: 218 KKKSWVG 224
           + K   G
Sbjct: 497 RNKHVTG 503



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 130/297 (43%), Gaps = 76/297 (25%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +++    +N+L+ L   +G L++L    ++ N L  LP  I N R+L+  + + NKL+ L
Sbjct: 158 LLIFKAENNRLRALAPEVGNLTELSEWYLANNALSRLPPQIGNLRNLQVFDLSNNKLQDL 217

Query: 73  PDTIGFELINLKTLSINCN----------------------------------------- 91
           P  +G+ L  L++ S+N N                                         
Sbjct: 218 PAEMGY-LARLRSFSVNENSNLKTLFPLEQLNQLQYMGLRNTLLDELPEDLCTLPSIVEL 276

Query: 92  ------KIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE--- 142
                 +I  +P  +  LT+LR LD   N L +LP ++ NL+NLE+L++ QN   +E   
Sbjct: 277 DLRNNLQIGRIPPEIGRLTTLRRLDLFGNKLTNLPAEIGNLVNLELLDLRQNSLAIELIP 336

Query: 143 --------------------TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
                               TLP  I  + +L ELD + N + ++P+ IGCL  LQKL++
Sbjct: 337 PELGRLTRLERLLMSKNNLATLPAEIKTMYALKELDAANNVLLSVPEEIGCLSNLQKLNV 396

Query: 183 EGNPLVS-PPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGALRN 238
            GN L++ PP   +   L+     L  K N  H+ P +   +  +VK    +  + N
Sbjct: 397 SGNRLLTLPPTIALLTALTK----LDIKGNEIHELPSEVGELSSVVKIDMSHNMMTN 449



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 100/201 (49%), Gaps = 23/201 (11%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  NQL+ LP  +G LS L+ LD+SGN L+  P    N R+L    A  N+LR L   
Sbjct: 115 LDLSGNQLEELPAELGQLSALQYLDISGNNLQVFPPEFGNLRALLIFKAENNRLRALAPE 174

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           +G  L  L    +  N +  LP  + +L +L+V D   N L+ LP ++  L  L   +++
Sbjct: 175 VG-NLTELSEWYLANNALSRLPPQIGNLRNLQVFDLSNNKLQDLPAEMGYLARLRSFSVN 233

Query: 136 QN--------------FQY-------LETLPYSIGLLMSLVELDVSYN-KITTLPDSIGC 173
           +N               QY       L+ LP  +  L S+VELD+  N +I  +P  IG 
Sbjct: 234 ENSNLKTLFPLEQLNQLQYMGLRNTLLDELPEDLCTLPSIVELDLRNNLQIGRIPPEIGR 293

Query: 174 LRKLQKLSLEGNPLVSPPMDV 194
           L  L++L L GN L + P ++
Sbjct: 294 LTTLRRLDLFGNKLTNLPAEI 314



 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 32/211 (15%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIEN------ 55
           IP+S+  R L    L +  N +  LP+ +G L++++VLD+  N +  +P  + +      
Sbjct: 30  IPKSV--RQLQCRELILAENDITSLPDELGKLARIEVLDLGNNRINHVPPALGDLAPTLR 87

Query: 56  ---------------------CRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
                                 R L++L+ + N+L +LP  +G +L  L+ L I+ N + 
Sbjct: 88  ELWLCNNKLFFTAPLTPNLGKLRLLQKLDLSGNQLEELPAELG-QLSALQYLDISGNNLQ 146

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSL 154
           + P    +L +L +  A  N L++L  ++ NL  L    ++ N   L  LP  IG L +L
Sbjct: 147 VFPPEFGNLRALLIFKAENNRLRALAPEVGNLTELSEWYLANN--ALSRLPPQIGNLRNL 204

Query: 155 VELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
              D+S NK+  LP  +G L +L+  S+  N
Sbjct: 205 QVFDLSNNKLQDLPAEMGYLARLRSFSVNEN 235


>gi|359319033|ref|XP_003638977.1| PREDICTED: protein LAP2-like isoform 2 [Canis lupus familiaris]
          Length = 1302

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 106/183 (57%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  L
Sbjct: 217 NRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIG-SL 275

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  Y
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAADHN--Y 333

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q L
Sbjct: 334 LQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQL 393

Query: 200 SAV 202
           +A+
Sbjct: 394 TAM 396



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 106/187 (56%), Gaps = 10/187 (5%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L  + A+ N + +LPD 
Sbjct: 74  LSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPD- 132

Query: 76  IGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            GF +L+NL  L +N   +  LP +   LT L++L+ R N LK LP+ +  L  LE L++
Sbjct: 133 -GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDL 191

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N ++ E +P  +  L  L E  +  N++T +P  IG L++L  L +  N +     ++
Sbjct: 192 GSN-EFTE-VPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNI-----EM 244

Query: 195 VEQGLSA 201
           +E+G+SA
Sbjct: 245 IEEGISA 251



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N+I
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLVSIEELDCSFNEI 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  ++  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNIRTFAADHNYLQQLPPEI 341



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 94/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           MI E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 244 MIEEGISA-CENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP +IG +L N++T + + N +  LP  +    ++ VL    N L++LP
Sbjct: 303 ELDCSFNEIEALPSSIG-QLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402


>gi|355699846|gb|AES01257.1| leucine rich repeat containing 1 [Mustela putorius furo]
          Length = 404

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 111/193 (57%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 153 LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 211

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 212 LDLGNNEIYNLPESIG-ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPE 270

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L  L ISQN   LE +P  IG L  L  L V  N++T LP+++G    L +L 
Sbjct: 271 EISGLTSLTDLVISQNL--LEVIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELV 328

Query: 182 LEGNPLVSPPMDV 194
           L  N L++ P  +
Sbjct: 329 LTENRLLTLPKSI 341



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/174 (37%), Positives = 95/174 (54%), Gaps = 3/174 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           NQL+ LP     L KL+ L +S N ++ LP  I N   L EL+ + N + ++P++I F  
Sbjct: 79  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISF-C 137

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
             L+    + N +  LP+S   L +L  L      L+SLPE++ NL NL  L + +N   
Sbjct: 138 KALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENL-- 195

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L  LP S+  L  L ELD+  N+I  LP+SIG L  L+ L L+GN L   P ++
Sbjct: 196 LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEI 249



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 104/210 (49%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP++    ++L  L+ N  
Sbjct: 112 ANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDI 171

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD--------------ARL 113
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD              A L
Sbjct: 172 SLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALL 230

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L  LP+++ NL NL  L++S+N   LE LP  I  L SL +L +S N +
Sbjct: 231 HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN--RLERLPEEISGLTSLTDLVISQNLL 288

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +PD IG L+KL  L ++ N L   P  V
Sbjct: 289 EVIPDGIGKLKKLSILKVDQNRLTQLPEAV 318



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 105/195 (53%), Gaps = 4/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+SLT +L  +  LD+ +N++  LP SIG L  LK L + GN L  LP+ I N ++L  
Sbjct: 199 LPDSLT-QLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLC 257

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L +LP+ I   L +L  L I+ N + ++P  +  L  L +L    N L  LPE
Sbjct: 258 LDVSENRLERLPEEISG-LTSLTDLVISQNLLEVIPDGIGKLKKLSILKVDQNRLTQLPE 316

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + +  +L  L +++N   L TLP SIG L  L  L+   NK+ +LP  IG    L    
Sbjct: 317 AVGDCESLTELVLTEN--RLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFC 374

Query: 182 LEGNPLVSPPMDVVE 196
           +  N L   P +V +
Sbjct: 375 VRDNRLTRIPSEVSQ 389



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 104/186 (55%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L+ +  L +  N+++ LP  I    +L  LDVS N +  +P++I  C++L+  + + N 
Sbjct: 90  QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNP 149

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L +LP++   EL NL  LS+N   +  LP+++ +L +L  L+ R N L  LP+ L  L  
Sbjct: 150 LTRLPESFP-ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRR 208

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           LE L++  N  Y   LP SIG L+ L +L +  N+++ LP  IG L+ L  L +  N L 
Sbjct: 209 LEELDLGNNEIY--NLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLE 266

Query: 189 SPPMDV 194
             P ++
Sbjct: 267 RLPEEI 272



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 3/155 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N++ LDV  N+L+ LP  I  L+ L  L +S NLLE +P  I   + L  L  + N+L
Sbjct: 252 LKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEVIPDGIGKLKKLSILKVDQNRL 311

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            QLP+ +G +  +L  L +  N+++ LP+S+  L  L  L+A  N L SLP+++    +L
Sbjct: 312 TQLPEAVG-DCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSL 370

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
            V  +  N   L  +P  +     L  LDV+ N++
Sbjct: 371 TVFCVRDN--RLTRIPSEVSQATELHVLDVAGNRL 403


>gi|426246387|ref|XP_004016976.1| PREDICTED: protein LAP2 [Ovis aries]
          Length = 1371

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 107/183 (58%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LD+S N +E + + I  C +L++L  + N L+QLP+TIG  L
Sbjct: 217 NRLTFIPGFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLPETIG-SL 275

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  L S+  LD  +N L++LP  +  L N+       N  Y
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLVSIEELDCSINELEALPSSIGQLTNVRTFAADHN--Y 333

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q L
Sbjct: 334 LQQLPPEIGNWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQL 393

Query: 200 SAV 202
           +A+
Sbjct: 394 TAM 396



 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 110/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 VVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+S 
Sbjct: 235 LDISKNNI-----EMVEEGISG 251



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTA 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDISKNNIEMVEEGISGCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLVSIEELDCSINEL 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  ++  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNVRTFAADHNYLQQLPPEI 341



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 76/137 (55%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++ + L NV  L +  NQL  LP+SIG L  ++ LD S N LE+LP +I    ++ 
Sbjct: 267 QLPETIGS-LKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSINELEALPSSIGQLTNVR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-NWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|291396405|ref|XP_002714440.1| PREDICTED: leucine rich repeat containing 1 [Oryctolagus cuniculus]
          Length = 614

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/214 (36%), Positives = 115/214 (53%), Gaps = 23/214 (10%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 210 LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 268

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L +LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 269 LDLGNNEIYNLPESIG-ALFHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPE 327

Query: 122 DLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELDVS 160
           ++  L +L  L ISQN                        L  LP ++G   SL EL ++
Sbjct: 328 EISGLTSLTDLVISQNLLEIIPDGIGKLKKLSILKVDQNRLTQLPEAVGECESLTELVLT 387

Query: 161 YNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N++ TLP SIG L+KL  L+ + N LVS P ++
Sbjct: 388 ENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI 421



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/195 (35%), Positives = 104/195 (53%), Gaps = 4/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+SLT +L  +  LD+ +N++  LP SIG L  LK L + GN L  LP+ I N ++L  
Sbjct: 256 LPDSLT-QLRRLEELDLGNNEIYNLPESIGALFHLKDLWLDGNQLSELPQEIGNLKNLLC 314

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L +LP+ I   L +L  L I+ N + I+P  +  L  L +L    N L  LPE
Sbjct: 315 LDVSENRLERLPEEIS-GLTSLTDLVISQNLLEIIPDGIGKLKKLSILKVDQNRLTQLPE 373

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +    +L  L +++N   L TLP SIG L  L  L+   NK+ +LP  IG    L    
Sbjct: 374 AVGECESLTELVLTEN--RLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFC 431

Query: 182 LEGNPLVSPPMDVVE 196
           +  N L   P +V +
Sbjct: 432 VRDNRLTRIPAEVSQ 446



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 95/176 (53%), Gaps = 4/176 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N++ LDV  N+L+ LP  I  L+ L  L +S NLLE +P  I   + L  L  + N+L
Sbjct: 309 LKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEIIPDGIGKLKKLSILKVDQNRL 368

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            QLP+ +G E  +L  L +  N+++ LP+S+  L  L  L+A  N L SLP+++    +L
Sbjct: 369 TQLPEAVG-ECESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSL 427

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            V  +  N   L  +P  +     L  LDV+ N++  LP S+  L KL+ L L  N
Sbjct: 428 TVFCVRDN--RLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTTL-KLKALWLSDN 480


>gi|359319031|ref|XP_003638976.1| PREDICTED: protein LAP2-like isoform 1 [Canis lupus familiaris]
          Length = 1372

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 106/183 (57%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  L
Sbjct: 217 NRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIG-SL 275

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  Y
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAADHN--Y 333

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q L
Sbjct: 334 LQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQL 393

Query: 200 SAV 202
           +A+
Sbjct: 394 TAM 396



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 111/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 VVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     +++E+G+SA
Sbjct: 235 LDVSKNNI-----EMIEEGISA 251



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N+I
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLVSIEELDCSFNEI 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  ++  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNIRTFAADHNYLQQLPPEI 341



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 94/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           MI E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 244 MIEEGISA-CENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP +IG +L N++T + + N +  LP  +    ++ VL    N L++LP
Sbjct: 303 ELDCSFNEIEALPSSIG-QLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402


>gi|301775170|ref|XP_002923003.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 1-like [Ailuropoda melanoleuca]
          Length = 521

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/214 (36%), Positives = 116/214 (54%), Gaps = 23/214 (10%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 117 LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 175

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 176 LDLGNNEIYNLPESIG-ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPE 234

Query: 122 DLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELDVS 160
           ++  L +L  L ISQN                        L  LP ++G   SL EL ++
Sbjct: 235 EISGLTSLTDLVISQNLLEMIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLT 294

Query: 161 YNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N++ TLP SIG L+KL  L+ + N LVS P ++
Sbjct: 295 ENRLLTLPKSIGKLKKLNNLNADRNKLVSLPKEI 328



 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 107/195 (54%), Gaps = 7/195 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   AR L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L
Sbjct: 24  VPEEIYRYARSLEELLLD--ANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQL 81

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP+S   L +L  L      L+SL
Sbjct: 82  VELDVSRNDIPEIPESISF-CKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 140

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++ NL NL  L + +N   L  LP S+  L  L ELD+  N+I  LP+SIG L  L+ 
Sbjct: 141 PENIGNLYNLASLELRENL--LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKD 198

Query: 180 LSLEGNPLVSPPMDV 194
           L L+GN L   P ++
Sbjct: 199 LWLDGNQLSELPQEI 213



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 86/250 (34%), Positives = 119/250 (47%), Gaps = 32/250 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP++    ++L  L+ N  
Sbjct: 76  ANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDI 135

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD--------------ARL 113
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD              A L
Sbjct: 136 SLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALL 194

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L  LP+++ NL NL  L++S+N   LE LP  I  L SL +L +S N +
Sbjct: 195 HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN--RLERLPEEISGLTSLTDLVISQNLL 252

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVG 224
             +PD IG L+KL  L ++ N L   P + V    S  +  L+E  N     PK    +G
Sbjct: 253 EMIPDGIGKLKKLSILKVDQNRLTQLP-EAVGDCESLTELVLTE--NRLLTLPKS---IG 306

Query: 225 KLVKYGTFNG 234
           KL K    N 
Sbjct: 307 KLKKLNNLNA 316



 Score = 81.6 bits (200), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 114/225 (50%), Gaps = 11/225 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+ A LL++  L +  NQL  LP  IG L  L  LDVS N LE LP+ I    SL +
Sbjct: 186 LPESIGA-LLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTD 244

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L  +PD IG +L  L  L ++ N++  LP+++    SL  L    N L +LP+
Sbjct: 245 LVISQNLLEMIPDGIG-KLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPK 303

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L  L  LN  +N   L +LP  IG   SL    V  N+++ +P  +    +L  L 
Sbjct: 304 SIGKLKKLNNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLSRIPAEVSQATELHVLD 361

Query: 182 LEGNPLVSPPMDVVEQGLSAV-------KGYLSEKMNNDHKSPKK 219
           + GN L+  P+ +    L A+       +  L+ + + DH + +K
Sbjct: 362 VAGNRLLHLPLSLTALKLKALWLSDNQSQPLLTFQTDTDHTTGEK 406



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 2/138 (1%)

Query: 57  RSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
           R LE ++     L  +P+ I     +L+ L ++ N++  LP+    L  LR L    N +
Sbjct: 9   RXLETIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 68

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + LP ++ N + L  L++S+N   +  +P SI    +L   D S N +T LP+S   L+ 
Sbjct: 69  QRLPPEIANFMQLVELDVSRN--DIPEIPESISFCKALQIADFSGNPLTRLPESFPELQN 126

Query: 177 LQKLSLEGNPLVSPPMDV 194
           L  LS+    L S P ++
Sbjct: 127 LTCLSVNDISLQSLPENI 144


>gi|27819886|gb|AAO24991.1| LP05663p [Drosophila melanogaster]
          Length = 527

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/176 (37%), Positives = 105/176 (59%), Gaps = 3/176 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L ++SN++  LP  IGCL  L+ L ++ N L SLP++++NC  L+ L+   NKL ++P  
Sbjct: 74  LYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPV 133

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           I + L +L TL +  N+I  +   L  L +L +L  R N ++ L   +  L+NL  L++S
Sbjct: 134 I-YRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVS 192

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            N  +LE LP  IG  ++L  LD+ +N++  +PDSIG L+ L +L +  N L S P
Sbjct: 193 HN--HLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVP 246



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 116/245 (47%), Gaps = 51/245 (20%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +    +N+  LD+  N+L  +P+SIG L  L  L +  N L S+P T++NC+S++E
Sbjct: 199 LPEDI-GNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPATLKNCKSMDE 257

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ------------SLTH------- 102
            N   N + QLPD +   L  L T++++ N+    P             +L H       
Sbjct: 258 FNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIP 317

Query: 103 -------------------LTSLRV----------LDARLNCLKSLPEDLENLINLEVLN 133
                              LT+L +          L+   N L+ LP+D+ NL NLE+L 
Sbjct: 318 YGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILI 377

Query: 134 ISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMD 193
           +S N   L+ +P +IG L  L  LD+  N+I  LP  IG L +LQ+L L+ N +   P  
Sbjct: 378 LSNNM--LKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPRS 435

Query: 194 VVEQG 198
           +   G
Sbjct: 436 IGHLG 440



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 97/161 (60%), Gaps = 2/161 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           +N+V L++ +N L+ LP+ I  L  L++L +S N+L+ +P TI N R L  L+   N++ 
Sbjct: 348 VNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIE 407

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG  L  L+ L +  N+I +LP+S+ HL +L  L    N L+ LPE++ +L +LE
Sbjct: 408 VLPHEIGL-LHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLE 466

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
            L I+QN   LE LP+ + L  +L  L++    ++T+P  I
Sbjct: 467 NLYINQN-PGLEKLPFELALCQNLKYLNIDKCPLSTIPPEI 506



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 26/179 (14%)

Query: 36  LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           +K LD+S + +  +P T++ C  L EL    NK+ QLP  IG  L++L+ L++N N +  
Sbjct: 48  IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGC-LVSLRNLALNENSLTS 106

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLP-----------------------EDLENLINLEVL 132
           LP+SL + + L+VLD R N L  +P                       +DL  L+NL +L
Sbjct: 107 LPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTML 166

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           ++ +N   +  L  +IG L++L  LDVS+N +  LP+ IG    L  L L+ N L+  P
Sbjct: 167 SLREN--KIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIP 223



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 99/185 (53%), Gaps = 4/185 (2%)

Query: 3   PESLTARLLNVVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEE 61
           P    A+  NV  +++  N++  +P  I   +K L  L++  N+L +LP  I    ++ E
Sbjct: 293 PTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVE 352

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N L++LPD I   L NL+ L ++ N +  +P ++ +L  LR+LD   N ++ LP 
Sbjct: 353 LNLATNALQKLPDDI-MNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPH 411

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L  L+ L +  N   +  LP SIG L +L  L VS N +  LP+ IG L  L+ L 
Sbjct: 412 EIGLLHELQRLILQTN--QITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLY 469

Query: 182 LEGNP 186
           +  NP
Sbjct: 470 INQNP 474



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 103/188 (54%), Gaps = 4/188 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L+N+ +L +  N+++ L ++IG L  L  LDVS N LE LP+ I NC +L  L+   N+
Sbjct: 159 QLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNE 218

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLI 127
           L  +PD+IG  L +L  L +  N++  +P +L +  S+   +   N +  LP+  L +L 
Sbjct: 219 LLDIPDSIG-NLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLS 277

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNP 186
            L  + +S+N Q+            ++  +++ +N+I  +P  I    K L KL+++ N 
Sbjct: 278 GLTTITLSRN-QFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENM 336

Query: 187 LVSPPMDV 194
           L + P+D+
Sbjct: 337 LTALPLDI 344



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNS-IGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +P+ + A L  +  + +  NQ    P       + +  +++  N ++ +P  I    + L
Sbjct: 268 LPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGL 327

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N L  LP  IG   +N+  L++  N +  LP  + +L +L +L    N LK +
Sbjct: 328 TKLNMKENMLTALPLDIG-TWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKI 386

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  + NL  L +L++ +N   +E LP+ IGLL  L  L +  N+IT LP SIG L  L  
Sbjct: 387 PNTIGNLRKLRILDLEEN--RIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTH 444

Query: 180 LSLEGNPLVSPPMDV 194
           LS+  N L   P ++
Sbjct: 445 LSVSENNLQFLPEEI 459


>gi|417765306|ref|ZP_12413270.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352488|gb|EJP04673.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 405

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/182 (39%), Positives = 108/182 (59%), Gaps = 3/182 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD++ N+L  LP  IG L  L+ L +S N L +LP+      +L+ELN + N
Sbjct: 114 GKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDN 173

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+TL++  N++  L + +  L +L+ L+   N L +LP ++  L 
Sbjct: 174 QLTTLPQEIG-QLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQ 232

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  LN+S N   L TLP  IG L +L  L++S N++TTL   IG L+ LQ L+L  N L
Sbjct: 233 NLHTLNLSDN--QLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQL 290

Query: 188 VS 189
            +
Sbjct: 291 TT 292



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 114/208 (54%), Gaps = 24/208 (11%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L +  N+LK LP  IG L  L+ L++S N L  LPK I    +L+ L+   N+
Sbjct: 69  KLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNR 128

Query: 69  LRQLPDTIG----------------------FELINLKTLSINCNKIVILPQSLTHLTSL 106
           L  LP  IG                       +L NL+ L+++ N++  LPQ +  L +L
Sbjct: 129 LTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNL 188

Query: 107 RVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITT 166
           + L+ + N L +L +++E L NL+ LN+S N   L TLP  IG L +L  L++S N++TT
Sbjct: 189 QTLNLKSNQLTTLFKEIEQLKNLQTLNLSDN--QLTTLPIEIGKLQNLHTLNLSDNQLTT 246

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           LP  IG L+ L  L+L GN L +  +++
Sbjct: 247 LPIEIGKLQNLHTLNLSGNQLTTLSIEI 274



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 105/184 (57%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           LNV VLD+       LP  I  L  L+ L +  N L++LPK I   ++L+ELN + N+L 
Sbjct: 48  LNVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLT 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG +L NL+ L +  N++ ILP  +  L +L+ L    N L +LP +   L NL+
Sbjct: 108 ILPKEIG-KLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+S N   L TLP  IG L +L  L++  N++TTL   I  L+ LQ L+L  N L + 
Sbjct: 167 ELNLSDN--QLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTL 224

Query: 191 PMDV 194
           P+++
Sbjct: 225 PIEI 228



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/193 (36%), Positives = 114/193 (59%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L N+  L++ SNQL  L   I  L  L+ L++S N L +LP  I   ++L  
Sbjct: 178 LPQEI-GQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHT 236

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N+L  LP  IG +L NL TL+++ N++  L   +  L +L+ L+   N L +L +
Sbjct: 237 LNLSDNQLTTLPIEIG-KLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSK 295

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++E L NL+ L++S  +  L  LP  IG L +L EL++  N++T LP  IG L+ LQ LS
Sbjct: 296 EIEQLKNLQTLSLS--YNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLS 353

Query: 182 LEGNPLVSPPMDV 194
           L  N L++ P ++
Sbjct: 354 LYKNRLMTFPKEI 366



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 106/201 (52%), Gaps = 4/201 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L++  NQL  LP  IG L  L  L++S N L +LP  I   ++L  LN + N+
Sbjct: 207 QLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQ 266

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  L   IG +L NL+ L+++ N++  L + +  L +L+ L    N L  LP+++  L N
Sbjct: 267 LTTLSIEIG-KLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQN 325

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEG-NPL 187
           L+ LN+  N   L  LP  IG L +L  L +  N++ T P  IG L+ LQ L L G N  
Sbjct: 326 LQELNLWNN--QLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHNQF 383

Query: 188 VSPPMDVVEQGLSAVKGYLSE 208
            S   + + + L   K Y  +
Sbjct: 384 SSEEKERIRKLLPNCKIYFGD 404



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 59/99 (59%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +  ++RVLD       +LP+ +E L NL+ L +  N   L+TLP  IG L +L 
Sbjct: 40  LTKALQNPLNVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDN--RLKTLPKEIGQLKNLQ 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           EL++S N++T LP  IG L  LQ+L L  N L   P+++
Sbjct: 98  ELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEI 136


>gi|255081536|ref|XP_002507990.1| predicted protein [Micromonas sp. RCC299]
 gi|226523266|gb|ACO69248.1| predicted protein [Micromonas sp. RCC299]
          Length = 323

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 106/187 (56%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL  + VL ++ NQL+ +P  IG L+ L  LD+  N L S+P  I    SL  L+   N
Sbjct: 25  GRLSALRVLYLNDNQLRNVPAEIGQLTSLVTLDLHANQLTSVPAEIGQLTSLVRLDLQVN 84

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  IG +L +L  L ++ N+++ +P  +  LTSL  L    N L S+P ++  L 
Sbjct: 85  QLTSVPAEIG-QLTSLAGLFLSRNQLLSVPAEIGQLTSLAHLYLSRNQLTSVPAEIGQLT 143

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  L IS N   L ++P  IG L SL EL ++ NK+T++P  IG L  L+KL L GN L
Sbjct: 144 SLAHLYISNN--QLTSVPAEIGQLTSLTELYLNGNKLTSVPAEIGQLTSLEKLDLAGNQL 201

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 202 TSLPAEI 208



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 106/187 (56%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++V LD+  NQL  +P  IG L+ L  L +S N L S+P  I    SL  L  + N
Sbjct: 71  GQLTSLVRLDLQVNQLTSVPAEIGQLTSLAGLFLSRNQLLSVPAEIGQLTSLAHLYLSRN 130

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  IG +L +L  L I+ N++  +P  +  LTSL  L    N L S+P ++  L 
Sbjct: 131 QLTSVPAEIG-QLTSLAHLYISNNQLTSVPAEIGQLTSLTELYLNGNKLTSVPAEIGQLT 189

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +LE L+++ N   L +LP  IG LMSL EL++  N++T++P  IG L  L +L L  N L
Sbjct: 190 SLEKLDLAGN--QLTSLPAEIGQLMSLTELNLHANQLTSVPAEIGQLTSLTELYLNANQL 247

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 248 TSVPAEI 254



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 103/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++  L + +NQL  +P  IG L+ L  L ++GN L S+P  I    SLE+L+   N
Sbjct: 140 GQLTSLAHLYISNNQLTSVPAEIGQLTSLTELYLNGNKLTSVPAEIGQLTSLEKLDLAGN 199

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L++L  L+++ N++  +P  +  LTSL  L    N L S+P ++  L 
Sbjct: 200 QLTSLPAEIG-QLMSLTELNLHANQLTSVPAEIGQLTSLTELYLNANQLTSVPAEIGQLT 258

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +LE L +  N   L  +   IG L SL  L +  NK+T+LP  IG L  L  L L GN L
Sbjct: 259 SLESLFLGNN--QLRNVLAEIGQLTSLKWLYLEDNKLTSLPAEIGQLTSLMMLHLNGNQL 316

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 317 TSLPAEI 323


>gi|24215562|ref|NP_713043.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074778|ref|YP_005989096.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196709|gb|AAN50061.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458568|gb|AER03113.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 288

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/181 (41%), Positives = 107/181 (59%), Gaps = 6/181 (3%)

Query: 12  NVVVLDVHSNQ---LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +V+VLD   N+   LK LP  IG L  LK L +S N + +LP  I N ++L+ L+ N N+
Sbjct: 48  DVLVLDYRDNEENPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNR 107

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  +P  IG  L NLK LSI  NK+  LP+ + +L +L+ L    N LK LP+++ NL  
Sbjct: 108 LETIPKEIG-NLKNLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRK 166

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ +++S N   L  LP  I  L SL+E+ +  N+ TTLP  IG L+ L+ L L  N L+
Sbjct: 167 LQRIHLSTN--ELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLI 224

Query: 189 S 189
           S
Sbjct: 225 S 225



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 110/188 (58%), Gaps = 3/188 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L + +N++  LP  IG L  L+VL ++GN LE++PK I N ++L+EL+  +N
Sbjct: 70  GNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWN 129

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL+ LP  IG  L NLK L ++ N++ ILPQ + +L  L+ +    N L  LP++++NL 
Sbjct: 130 KLQTLPKEIG-NLKNLKELYLSRNQLKILPQEIGNLRKLQRIHLSTNELTKLPQEIKNLE 188

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  + +  N     TLP  IG L +L  L +  N++ +L   IG L+ L++L LE N L
Sbjct: 189 SLLEIYLYDN--QFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELYLEENQL 246

Query: 188 VSPPMDVV 195
              P  + 
Sbjct: 247 TMLPKQIA 254



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 112/190 (58%), Gaps = 3/190 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+ VL ++ N+L+ +P  IG L  LK L +  N L++LPK I N ++L+EL  + N
Sbjct: 93  GNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTLPKEIGNLKNLKELYLSRN 152

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG  L  L+ + ++ N++  LPQ + +L SL  +    N   +LP+++ NL 
Sbjct: 153 QLKILPQEIG-NLRKLQRIHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLK 211

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L + +N Q +  LP  IG L +L EL +  N++T LP  I  L++L +LSL+GN  
Sbjct: 212 NLRNLVLGRN-QLISLLP-EIGNLKNLKELYLEENQLTMLPKQIAALKQLARLSLKGNQF 269

Query: 188 VSPPMDVVEQ 197
            S   + +++
Sbjct: 270 PSEEKERIQR 279



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/54 (53%), Positives = 37/54 (68%)

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L+TLP  IG L +L EL +S N+ITTLP  IG L+ LQ LSL GN L + P ++
Sbjct: 62  LKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEI 115


>gi|355749960|gb|EHH54298.1| Erbb2-interacting protein [Macaca fascicularis]
          Length = 1411

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  
Sbjct: 275 LKNITTLKIDENQLIYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 111/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 VVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+SA
Sbjct: 235 LDVSKNNI-----EMVEEGISA 251



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLIYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  ++  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNIRTFAADHNYLQQLPPEI 341



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 94/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+ E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 244 MVEEGISA-CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLIYLPDSIGGLISVE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP +IG +L N++T + + N +  LP  +    ++ VL    N L++LP
Sbjct: 303 ELDCSFNEVEALPSSIG-QLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402


>gi|255084109|ref|XP_002508629.1| hypothetical protein MICPUN_62214 [Micromonas sp. RCC299]
 gi|226523906|gb|ACO69887.1| hypothetical protein MICPUN_62214 [Micromonas sp. RCC299]
          Length = 1098

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/205 (37%), Positives = 109/205 (53%), Gaps = 6/205 (2%)

Query: 2    IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
            +P  L  RL  +  L +H NQ+  LP  IG L+ L+VL ++ N L S+P  I    SL E
Sbjct: 890  VPAEL-GRLSALRWLSLHGNQVTSLPAEIGQLTSLEVLYLTENQLTSVPAEIGQLTSLRE 948

Query: 62   LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
            L    N+L  +P  IG +L  L  L +  N++  LP  +  L +L  L    N L S+P 
Sbjct: 949  LYLYENQLTSVPAEIG-QLTALARLELRDNQLTSLPAEIGQLAALEKLSLDSNQLTSVPA 1007

Query: 122  DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            ++  L +L+ L +S N   L ++P  IG L SL EL +  N++T++P+ IG L  LQ L 
Sbjct: 1008 EIGQLTSLKTLGLSDNM--LTSVPADIGQLTSLKELRLGGNQLTSVPEEIGQLTSLQGLY 1065

Query: 182  LEGNPLVSPPMDVVEQGLSAVKGYL 206
            L  N L S P  + E  L AV  Y+
Sbjct: 1066 LWQNRLTSVPAAIRE--LRAVGCYV 1088



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L  +  L +++NQL  LP  IG L  L++L + GN L S+P  I    SL+ 
Sbjct: 303 VPEEI-GQLTAMTELYLNANQLTSLPVEIGQLRSLEMLQLGGNQLTSVPAEIRQLTSLKC 361

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ N N+L  +P  IG +L +L +L +  N++  +P  +  LT++  L    N L SLP 
Sbjct: 362 LDLNNNQLTSVPAEIG-QLTSLISLHLGKNQLTSVPAEIGQLTAMTELYLNANQLTSLPA 420

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L  L  L +  N   L ++P  IG L SL EL++S N++T +P  IG LR  ++  
Sbjct: 421 EIWQLTPLTELYLYGN--QLTSVPAEIGQLRSLTELNLSSNQLTNVPAEIGQLRSRREFG 478

Query: 182 LEGNPLVSPPMDV 194
           L GN L S P ++
Sbjct: 479 LSGNQLTSVPAEI 491



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 106/187 (56%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL  +  L V  N L  +P  IG L+ L+ L +SGN L S+P+ I    ++ EL  N N
Sbjct: 262 GRLTALRELVVGGNALTSVPAEIGLLTSLRELWLSGNRLTSVPEEIGQLTAMTELYLNAN 321

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L +L+ L +  N++  +P  +  LTSL+ LD   N L S+P ++  L 
Sbjct: 322 QLTSLPVEIG-QLRSLEMLQLGGNQLTSVPAEIRQLTSLKCLDLNNNQLTSVPAEIGQLT 380

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  L++ +N   L ++P  IG L ++ EL ++ N++T+LP  I  L  L +L L GN L
Sbjct: 381 SLISLHLGKN--QLTSVPAEIGQLTAMTELYLNANQLTSLPAEIWQLTPLTELYLYGNQL 438

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 439 TSVPAEI 445



 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 114/210 (54%), Gaps = 5/210 (2%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  NQL  +P  IG L+ LK L++ GN L S+P  I    SLE L+ + NKL  +P  
Sbjct: 638 LSLAVNQLTSVPAEIGQLTSLKTLELGGNQLTSVPAEIGQLTSLETLDLDDNKLTSVPAD 697

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL-KSLPEDLENLINLEVLNI 134
           I  +L +L++L +  N +   P+ +  LTSL+ L  R N L  S+P ++  L +L+ L++
Sbjct: 698 ILQQLTSLESLELGDNHLTSWPEEIGQLTSLKELTLRGNKLTTSVPAEIGQLTSLKTLDL 757

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N   L ++P  IG L SL  L ++ N++T++P  +G L  L+ L L+GN L   P ++
Sbjct: 758 RCN--QLTSVPAEIGQLTSLRWLWLNDNRLTSVPAELGQLTSLEGLWLKGNQLTIVPAEI 815

Query: 195 VEQGLSAVKGYLSEKMNNDHKSPKK--KSW 222
            E   +  +  L + +  D     +  ++W
Sbjct: 816 RELKAAGCRVDLDDGVTMDEGDDARALRTW 845



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/189 (33%), Positives = 103/189 (54%), Gaps = 3/189 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++  L++ SNQL  +P  IG L   +   +SGN L S+P  I    SLEE   + N
Sbjct: 446 GQLRSLTELNLSSNQLTNVPAEIGQLRSRREFGLSGNQLTSVPAEIGQLTSLEEFGLSGN 505

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  IG  L +L+ L +  NK+  +P  +  L +L  L    N L S+P ++  L 
Sbjct: 506 QLTSVPAEIG-RLTSLERLWLEDNKLTSVPAEIGRLRALEWLYLHGNQLTSVPAEVGQLT 564

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +LE L++  N   L ++P  +G L SL+ L++  N++T++P  IG L  L +L L  N L
Sbjct: 565 SLEKLDLQHN--QLTSVPVEVGQLTSLMSLNLGNNRLTSVPAEIGQLTSLWELWLHDNEL 622

Query: 188 VSPPMDVVE 196
            S P ++ +
Sbjct: 623 TSVPAEIWQ 631



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/188 (35%), Positives = 103/188 (54%), Gaps = 4/188 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL  +  L +H NQL  +P  +G L+ L+ LD+  N L S+P  +    SL  LN   N
Sbjct: 538 GRLRALEWLYLHGNQLTSVPAEVGQLTSLEKLDLQHNQLTSVPVEVGQLTSLMSLNLGNN 597

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  IG +L +L  L ++ N++  +P  +  LTSLR L   +N L S+P ++  L 
Sbjct: 598 RLTSVPAEIG-QLTSLWELWLHDNELTSVPAEIWQLTSLRELSLAVNQLTSVPAEIGQLT 656

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP-DSIGCLRKLQKLSLEGNP 186
           +L+ L +  N   L ++P  IG L SL  LD+  NK+T++P D +  L  L+ L L  N 
Sbjct: 657 SLKTLELGGN--QLTSVPAEIGQLTSLETLDLDDNKLTSVPADILQQLTSLESLELGDNH 714

Query: 187 LVSPPMDV 194
           L S P ++
Sbjct: 715 LTSWPEEI 722



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 3/172 (1%)

Query: 25  CLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLK 84
            +P  +G L+ L+ L V GN L S+P  I    SL EL  + N+L  +P+ IG +L  + 
Sbjct: 256 AVPAEVGRLTALRELVVGGNALTSVPAEIGLLTSLRELWLSGNRLTSVPEEIG-QLTAMT 314

Query: 85  TLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
            L +N N++  LP  +  L SL +L    N L S+P ++  L +L+ L+++ N   L ++
Sbjct: 315 ELYLNANQLTSLPVEIGQLRSLEMLQLGGNQLTSVPAEIRQLTSLKCLDLNNN--QLTSV 372

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           P  IG L SL+ L +  N++T++P  IG L  + +L L  N L S P ++ +
Sbjct: 373 PAEIGQLTSLISLHLGKNQLTSVPAEIGQLTAMTELYLNANQLTSLPAEIWQ 424



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 73/129 (56%), Gaps = 3/129 (2%)

Query: 66   FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
            F     +P  +G  L  L+ LS++ N++  LP  +  LTSL VL    N L S+P ++  
Sbjct: 884  FGLTGAVPAELG-RLSALRWLSLHGNQVTSLPAEIGQLTSLEVLYLTENQLTSVPAEIGQ 942

Query: 126  LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            L +L  L + +N   L ++P  IG L +L  L++  N++T+LP  IG L  L+KLSL+ N
Sbjct: 943  LTSLRELYLYEN--QLTSVPAEIGQLTALARLELRDNQLTSLPAEIGQLAALEKLSLDSN 1000

Query: 186  PLVSPPMDV 194
             L S P ++
Sbjct: 1001 QLTSVPAEI 1009



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 67/121 (55%), Gaps = 5/121 (4%)

Query: 77  GFELINLKTLSINCNKIVI---LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLN 133
           G  + N + + +  N+  +   +P  +  LT+LR L    N L S+P ++  L +L  L 
Sbjct: 235 GVTMENGRVVQLELNEFGLTGAVPAEVGRLTALRELVVGGNALTSVPAEIGLLTSLRELW 294

Query: 134 ISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMD 193
           +S N   L ++P  IG L ++ EL ++ N++T+LP  IG LR L+ L L GN L S P +
Sbjct: 295 LSGN--RLTSVPEEIGQLTAMTELYLNANQLTSLPVEIGQLRSLEMLQLGGNQLTSVPAE 352

Query: 194 V 194
           +
Sbjct: 353 I 353


>gi|338718816|ref|XP_001915867.2| PREDICTED: LOW QUALITY PROTEIN: protein LAP2 [Equus caballus]
          Length = 1374

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 105/183 (57%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  L
Sbjct: 217 NRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIG-SL 275

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            NL TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  Y
Sbjct: 276 KNLTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAADHN--Y 333

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+  +L  N L + P    + Q L
Sbjct: 334 LQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVTNLSDNRLKNLPFSFTKLQQL 393

Query: 200 SAV 202
           +A+
Sbjct: 394 TAM 396



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 111/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 VVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+SA
Sbjct: 235 LDVSKNNI-----EMVEEGISA 251



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L NL  L I +N   L  LP SIG L+S+ ELD S+N+I
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNLTTLKIDEN--QLMYLPDSIGGLVSIEELDCSFNEI 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  ++  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNIRTFAADHNYLQQLPPEI 341



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 93/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+ E ++A   N+  L + SN L+ LP +IG L  L  L +  N L  LP +I    S+E
Sbjct: 244 MVEEGISA-CENLQDLLLSSNSLQQLPETIGSLKNLTTLKIDENQLMYLPDSIGGLVSIE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP +IG +L N++T + + N +  LP  +    ++ VL    N L++LP
Sbjct: 303 ELDCSFNEIEALPSSIG-QLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 EEMGDMQKLKVTNLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 24/209 (11%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL  + +L++  NQLK LP ++  L++L+ LD+  N    +P+ +E    L+E   + N
Sbjct: 158 GRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGN 217

Query: 68  KLRQLPDTIG--------------FELI--------NLKTLSINCNKIVILPQSLTHLTS 105
           +L  +P  IG               E++        NL+ L ++ N +  LP+++  L +
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 106 LRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
           L  L    N L  LP+ +  L+++E L+ S  F  +E LP SIG L ++      +N + 
Sbjct: 278 LTTLKIDENQLMYLPDSIGGLVSIEELDCS--FNEIEALPSSIGQLTNIRTFAADHNYLQ 335

Query: 166 TLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LP  IG  + +  L L  N L + P ++
Sbjct: 336 QLPPEIGSWKNITVLFLHSNKLETLPEEM 364


>gi|380814688|gb|AFE79218.1| protein LAP2 isoform 7 [Macaca mulatta]
          Length = 1301

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  
Sbjct: 275 LKNITTLKIDENQLIYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 106/187 (56%), Gaps = 10/187 (5%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L  + A+ N + +LPD 
Sbjct: 74  LSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPD- 132

Query: 76  IGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            GF +L+NL  L +N   +  LP +   LT L++L+ R N LK LP+ +  L  LE L++
Sbjct: 133 -GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDL 191

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N ++ E +P  +  L  L E  +  N++T +P  IG L++L  L +  N +     ++
Sbjct: 192 GSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EM 244

Query: 195 VEQGLSA 201
           VE+G+SA
Sbjct: 245 VEEGISA 251



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLIYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  ++  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNIRTFAADHNYLQQLPPEI 341



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 94/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+ E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 244 MVEEGISA-CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLIYLPDSIGGLISVE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP +IG +L N++T + + N +  LP  +    ++ VL    N L++LP
Sbjct: 303 ELDCSFNEVEALPSSIG-QLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402


>gi|359727309|ref|ZP_09266005.1| hypothetical protein Lwei2_10285 [Leptospira weilii str.
           2006001855]
          Length = 455

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 71/184 (38%), Positives = 106/184 (57%), Gaps = 4/184 (2%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR- 70
           +V VL++    L   P  I     LK LD+S N  ++LP+ I   ++L+ELN +FN    
Sbjct: 52  DVRVLNLSYRYLTTFPKGIEKFQNLKHLDLSENFFKTLPQEIGRLQNLQELNLSFNNNPI 111

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG  L NL+ L+++ N++  LPQ +  L +L+ L+   N L  LP+++  L NLE
Sbjct: 112 DLPQEIG-RLQNLERLNLSGNRLTTLPQEIWRLQNLQELNLSSNYLIDLPQEIGRLQNLE 170

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            LN+S N   L TLP  IG L  L  L V++N++T LP  IG L+ L++L L  N L + 
Sbjct: 171 QLNLSGN--RLTTLPQEIGQLKKLEWLHVNHNRLTVLPKEIGQLQNLKELLLYDNSLTTL 228

Query: 191 PMDV 194
           P ++
Sbjct: 229 PEEI 232



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 111/193 (57%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  RL N+  L++  N+L  LP  I  L  L+ L++S N L  LP+ I   ++LE+
Sbjct: 113 LPQEI-GRLQNLERLNLSGNRLTTLPQEIWRLQNLQELNLSSNYLIDLPQEIGRLQNLEQ 171

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N+L  LP  IG +L  L+ L +N N++ +LP+ +  L +L+ L    N L +LPE
Sbjct: 172 LNLSGNRLTTLPQEIG-QLKKLEWLHVNHNRLTVLPKEIGQLQNLKELLLYDNSLTTLPE 230

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L   + L + +N   L TLP  +  L +L  + +  N++T+LP  IG L+ LQ+L 
Sbjct: 231 EIGQLQKFKQLVLHEN--QLTTLPQGLCKLQNLERIYLHQNRLTSLPQEIGQLQNLQELH 288

Query: 182 LEGNPLVSPPMDV 194
           L  N L + P ++
Sbjct: 289 LSSNQLKTLPKEI 301



 Score = 97.1 bits (240), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 114/237 (48%), Gaps = 46/237 (19%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  RL N+  L++  N+L  LP  IG L KL+ L V+ N L  LPK I   ++L+E
Sbjct: 159 LPQEI-GRLQNLEQLNLSGNRLTTLPQEIGQLKKLEWLHVNHNRLTVLPKEIGQLQNLKE 217

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N L  LP+ IG +L   K L ++ N++  LPQ L  L +L  +    N L SLP+
Sbjct: 218 LLLYDNSLTTLPEEIG-QLQKFKQLVLHENQLTTLPQGLCKLQNLERIYLHQNRLTSLPQ 276

Query: 122 DLENLINLEVLNISQN-------------------------------------------- 137
           ++  L NL+ L++S N                                            
Sbjct: 277 EIGQLQNLQELHLSSNQLKTLPKEIEKLHNLQILNLNNNELTALPKEIGQLQNLYGLNLK 336

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
              L  LP  IG L ++ +LD+S N++TTLP  IG L+KL  L+L GN L S P ++
Sbjct: 337 LNKLTILPKEIGQLQNMRDLDLSDNQLTTLPSEIGQLKKLHSLNLSGNSLTSFPKEI 393



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 101/179 (56%), Gaps = 9/179 (5%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ L  +L N+  + +H N+L  LP  IG L  L+ L +S N L++LPK IE   +L+ 
Sbjct: 251 LPQGL-CKLQNLERIYLHQNRLTSLPQEIGQLQNLQELHLSSNQLKTLPKEIEKLHNLQI 309

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN N N+L  LP  IG +L NL  L++  NK+ ILP+ +  L ++R LD   N L +LP 
Sbjct: 310 LNLNNNELTALPKEIG-QLQNLYGLNLKLNKLTILPKEIGQLQNMRDLDLSDNQLTTLPS 368

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           ++  L  L  LN+S N   L + P  IG L +L      + ++  +PD I    K++KL
Sbjct: 369 EIGQLKKLHSLNLSGN--SLTSFPKEIGKLQNL-----KFLRLRGIPDLIPQKEKIRKL 420



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/100 (38%), Positives = 62/100 (62%), Gaps = 3/100 (3%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L + T +RVL+     L + P+ +E   NL+ L++S+NF   +TLP  IG L +L 
Sbjct: 43  LNEALKNPTDVRVLNLSYRYLTTFPKGIEKFQNLKHLDLSENF--FKTLPQEIGRLQNLQ 100

Query: 156 ELDVSY-NKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           EL++S+ N    LP  IG L+ L++L+L GN L + P ++
Sbjct: 101 ELNLSFNNNPIDLPQEIGRLQNLERLNLSGNRLTTLPQEI 140



 Score = 45.1 bits (105), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 5/80 (6%)

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
            L E L+N  ++ VLN+S  ++YL T P  I    +L  LD+S N   TLP  IG L+ L
Sbjct: 42  DLNEALKNPTDVRVLNLS--YRYLTTFPKGIEKFQNLKHLDLSENFFKTLPQEIGRLQNL 99

Query: 178 QKLSLEGNPLVSPPMDVVEQ 197
           Q+L+L  N   + P+D+ ++
Sbjct: 100 QELNLSFN---NNPIDLPQE 116


>gi|345801801|ref|XP_547339.3| PREDICTED: leucine-rich repeat-containing protein 7 [Canis lupus
           familiaris]
          Length = 1537

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 108/184 (58%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP SIG L  L  LD+S N +E++   I  C +LE+
Sbjct: 199 LPEVLD-QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMEISGCEALED 257

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+QLPD+IG  L  L TL ++ N++ ILP ++ +L+ L   D   N L+SLP 
Sbjct: 258 LLLSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPS 316

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L + +NF  L  LP  IG   ++  + +  NK+  LP+ IG ++KL+ L+
Sbjct: 317 TIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLN 374

Query: 182 LEGN 185
           L  N
Sbjct: 375 LSDN 378



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 108/233 (46%), Gaps = 50/233 (21%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP +I  L  LK LD+S N ++  P+ I+ C+ L 
Sbjct: 59  EELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   L  LR+L+ R N LK+L
Sbjct: 119 IIEASVNPISKLPD--GFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTL 176

Query: 120 PEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELD 158
           P+ +  L  LE L++  N                        L+ LP SIG L  LV LD
Sbjct: 177 PKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD 236

Query: 159 VSYNKITT-----------------------LPDSIGCLRKLQKLSLEGNPLV 188
           +S N+I T                       LPDSIG L+KL  L ++ N L 
Sbjct: 237 MSKNRIETVDMEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLT 289



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP+SIG L KL  L V  N L  LP TI N   LEE + + N+L  LP TIG+ 
Sbjct: 262 SNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGY- 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+TL+++ N +  LP+ +    ++ V+  R N L+ LPE++  +  L VLN+S N  
Sbjct: 321 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+ LP+S   L  L  L +S N+   L
Sbjct: 379 RLKNLPFSFTKLKELAALWLSDNQSKAL 406



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 69  LRQLP-DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P +   FE   L+ L ++ N+I  LP+ L +  +LR L    N L +LP  + +L+
Sbjct: 34  LQQVPKEVFNFERT-LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLV 92

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           NL+ L+IS+N   ++  P +I     L  ++ S N I+ LPD    L  L +L L
Sbjct: 93  NLKELDISKNG--VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYL 145



 Score = 41.2 bits (95), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 38/61 (62%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP  IG + KL+VL++S N L++LP +    + L  L  + N+ + 
Sbjct: 346 NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKA 405

Query: 72  L 72
           L
Sbjct: 406 L 406


>gi|260834781|ref|XP_002612388.1| hypothetical protein BRAFLDRAFT_218979 [Branchiostoma floridae]
 gi|229297765|gb|EEN68397.1| hypothetical protein BRAFLDRAFT_218979 [Branchiostoma floridae]
          Length = 914

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 89/240 (37%), Positives = 123/240 (51%), Gaps = 15/240 (6%)

Query: 2   IPESLTARL--LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           IP+  TA L   N+ VLD+  NQ+K LP +I  L  LKVL V  N L+ L   +     L
Sbjct: 90  IPQVPTAVLDIENIEVLDLTGNQIKSLPAAISRLKLLKVLRVDYNKLQLLADNVCCLYKL 149

Query: 60  EELNANFNKLRQLPDTIGFELI-NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKS 118
           EE +A  N L +LP   GFE    LK L ++ N   I P ++ +L  L  LD   N L++
Sbjct: 150 EEFSAVGNNLTRLPP--GFESSRRLKRLRLSHNSFEIFPPNVENLKRLEYLDVSGNMLRA 207

Query: 119 LPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQ 178
           LP+ ++ L +L VL  S N   L  LP  +  + +L EL V  N I T+P  I  L  L+
Sbjct: 208 LPQRIDRLESLGVLKTSSN--KLTVLPSGLFKMTNLRELAVDDNLIRTIPAEICGLTGLE 265

Query: 179 ---KLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYG-TFNG 234
              K  ++ NPL+SPP+D+ E GL  +  Y  +     H S   +   GK+V  G  F G
Sbjct: 266 NFGKEHIDNNPLISPPIDMFEHGLRGLCKYFEDM----HVSSASELPTGKVVLLGEVFAG 321



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 94/166 (56%), Gaps = 3/166 (1%)

Query: 26  LPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKT 85
           LP+S   +  L  +++S N +E LP+ I N  +++ L    N L QLP + G +L  L++
Sbjct: 1   LPDSFCDMENLVKVNLSDNAIEQLPERIGNLVNVKNLYLRGNNLAQLPMSFG-KLDLLES 59

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L+++ N +  LP +   L SL+ L+     +  +P  + ++ N+EVL+++ N   +++LP
Sbjct: 60  LTLSGNGLQELPSTFGELASLKTLNLSQQGIPQVPTAVLDIENIEVLDLTGN--QIKSLP 117

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            +I  L  L  L V YNK+  L D++ CL KL++ S  GN L   P
Sbjct: 118 AAISRLKLLKVLRVDYNKLQLLADNVCCLYKLEEFSAVGNNLTRLP 163



 Score = 77.0 bits (188), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 101/191 (52%), Gaps = 5/191 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+S    + N+V +++  N ++ LP  IG L  +K L + GN L  LP +      LE 
Sbjct: 1   LPDSF-CDMENLVKVNLSDNAIEQLPERIGNLVNVKNLYLRGNNLAQLPMSFGKLDLLES 59

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L++LP T G EL +LKTL+++   I  +P ++  + ++ VLD   N +KSLP 
Sbjct: 60  LTLSGNGLQELPSTFG-ELASLKTLNLSQQGIPQVPTAVLDIENIEVLDLTGNQIKSLPA 118

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L  L+VL +  ++  L+ L  ++  L  L E     N +T LP      R+L++L 
Sbjct: 119 AISRLKLLKVLRV--DYNKLQLLADNVCCLYKLEEFSAVGNNLTRLPPGFESSRRLKRLR 176

Query: 182 LEGNPL-VSPP 191
           L  N   + PP
Sbjct: 177 LSHNSFEIFPP 187


>gi|410967519|ref|XP_003990266.1| PREDICTED: leucine-rich repeat-containing protein 7 [Felis catus]
          Length = 1537

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 108/184 (58%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP SIG L  L  LD+S N +E++   I  C +LE+
Sbjct: 199 LPEVLD-QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMEISGCEALED 257

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+QLPD+IG  L  L TL ++ N++ ILP ++ +L+ L   D   N L+SLP 
Sbjct: 258 LLLSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPS 316

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L + +NF  L  LP  IG   ++  + +  NK+  LP+ IG ++KL+ L+
Sbjct: 317 TIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLN 374

Query: 182 LEGN 185
           L  N
Sbjct: 375 LSDN 378



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 108/233 (46%), Gaps = 50/233 (21%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP +I  L  LK LD+S N ++  P+ I+ C+ L 
Sbjct: 59  EELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   L  LR+L+ R N LK+L
Sbjct: 119 IIEASVNPISKLPD--GFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTL 176

Query: 120 PEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELD 158
           P+ +  L  LE L++  N                        L+ LP SIG L  LV LD
Sbjct: 177 PKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD 236

Query: 159 VSYNKITT-----------------------LPDSIGCLRKLQKLSLEGNPLV 188
           +S N+I T                       LPDSIG L+KL  L ++ N L 
Sbjct: 237 MSKNRIETVDMEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLT 289



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP+SIG L KL  L V  N L  LP TI N   LEE + + N+L  LP TIG+ 
Sbjct: 262 SNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGY- 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+TL+++ N +  LP+ +    ++ V+  R N L+ LPE++  +  L VLN+S N  
Sbjct: 321 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+ LP+S   L  L  L +S N+   L
Sbjct: 379 RLKNLPFSFTKLKELAALWLSDNQSKAL 406



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 69  LRQLP-DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P +   FE   L+ L ++ N+I  LP+ L +  +LR L    N L +LP  + +L+
Sbjct: 34  LQQVPKEVFNFERT-LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLV 92

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           NL+ L+IS+N   ++  P +I     L  ++ S N I+ LPD    L  L +L L
Sbjct: 93  NLKELDISKNG--VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYL 145



 Score = 41.2 bits (95), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 38/61 (62%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP  IG + KL+VL++S N L++LP +    + L  L  + N+ + 
Sbjct: 346 NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKA 405

Query: 72  L 72
           L
Sbjct: 406 L 406


>gi|149019125|gb|EDL77766.1| similar to RIKEN cDNA A430093J20 gene, isoform CRA_c [Rattus
           norvegicus]
          Length = 443

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/214 (36%), Positives = 117/214 (54%), Gaps = 23/214 (10%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 39  LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 97

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 98  LDLGNNEIYSLPESIGA-LLHLKDLWLDGNQLSELPQEIGNLRNLLCLDVSENRLERLPE 156

Query: 122 DLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELDVS 160
           ++  LI+L  L +SQN                        L  LP +IG   +L EL ++
Sbjct: 157 EISGLISLTDLVVSQNLLETVPDGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLT 216

Query: 161 YNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N++ TLP SIG L+KL  L+ + N LVS P ++
Sbjct: 217 ENRLLTLPTSIGKLKKLNNLNADRNKLVSLPKEI 250



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/181 (38%), Positives = 97/181 (53%), Gaps = 3/181 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           + +V LDV  N +  +P SI     L+V D SGN L  LP++    ++L  L+ N   L+
Sbjct: 1   MQLVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQ 60

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ IG  L NL +L +  N +  LP SLT L  L  LD   N + SLPE +  L++L+
Sbjct: 61  SLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALLHLK 119

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +  N   L  LP  IG L +L+ LDVS N++  LP+ I  L  L  L +  N L + 
Sbjct: 120 DLWLDGN--QLSELPQEIGNLRNLLCLDVSENRLERLPEEISGLISLTDLVVSQNLLETV 177

Query: 191 P 191
           P
Sbjct: 178 P 178



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/193 (36%), Positives = 104/193 (53%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+SLT +L  +  LD+ +N++  LP SIG L  LK L + GN L  LP+ I N R+L  
Sbjct: 85  LPDSLT-QLRRLEELDLGNNEIYSLPESIGALLHLKDLWLDGNQLSELPQEIGNLRNLLC 143

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L +LP+ I   LI+L  L ++ N +  +P  +  L  L +L    N L  LPE
Sbjct: 144 LDVSENRLERLPEEISG-LISLTDLVVSQNLLETVPDGIGKLKKLSILKLDQNRLTQLPE 202

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + +  NL  L +++N   L TLP SIG L  L  L+   NK+ +LP  IG    L    
Sbjct: 203 AIGDCENLTELVLTEN--RLLTLPTSIGKLKKLNNLNADRNKLVSLPKEIGGCCSLTVFC 260

Query: 182 LEGNPLVSPPMDV 194
           +  N L   P +V
Sbjct: 261 IRDNRLTRIPSEV 273



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 101/190 (53%), Gaps = 7/190 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N++ LDV  N+L+ LP  I  L  L  L VS NLLE++P  I   + L  L  + N
Sbjct: 136 GNLRNLLCLDVSENRLERLPEEISGLISLTDLVVSQNLLETVPDGIGKLKKLSILKLDQN 195

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L QLP+ IG +  NL  L +  N+++ LP S+  L  L  L+A  N L SLP+++    
Sbjct: 196 RLTQLPEAIG-DCENLTELVLTENRLLTLPTSIGKLKKLNNLNADRNKLVSLPKEIGGCC 254

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN-- 185
           +L V  I  N   L  +P  +   M L  LDV+ N++  LP S+  L KL+ L L  N  
Sbjct: 255 SLTVFCIRDN--RLTRIPSEVSQAMELHVLDVAGNRLHHLPLSLTTL-KLKALWLSDNQS 311

Query: 186 -PLVSPPMDV 194
            PL++   DV
Sbjct: 312 QPLLTFQTDV 321


>gi|380814690|gb|AFE79219.1| protein LAP2 isoform 2 [Macaca mulatta]
 gi|383419995|gb|AFH33211.1| protein LAP2 isoform 2 [Macaca mulatta]
          Length = 1370

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  
Sbjct: 275 LKNITTLKIDENQLIYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 111/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 VVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+SA
Sbjct: 235 LDVSKNNI-----EMVEEGISA 251



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLIYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  ++  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNIRTFAADHNYLQQLPPEI 341



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 94/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+ E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 244 MVEEGISA-CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLIYLPDSIGGLISVE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP +IG +L N++T + + N +  LP  +    ++ VL    N L++LP
Sbjct: 303 ELDCSFNEVEALPSSIG-QLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402


>gi|410449672|ref|ZP_11303725.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410016429|gb|EKO78508.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 355

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/196 (39%), Positives = 113/196 (57%), Gaps = 6/196 (3%)

Query: 3   PESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGN--LLESLPKTIENCRSLE 60
           PE +   L N+  LD+H N L  LP +IG L  L+VLD+S N      L + I + +SLE
Sbjct: 107 PEEI-GHLKNLKKLDLHYNLLITLPENIGRLQNLEVLDLSNNRRTFFFLSEKIGDLQSLE 165

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L+ + N L  LP  IG +L  L++L ++ N + ILP+ +  L  LR L  + N LK+LP
Sbjct: 166 KLDLSENSLSTLPKEIG-KLQCLQSLDLSENSLAILPKEIGKLQCLRELSLKGNRLKTLP 224

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++  L  L  L++S+N   L TLP  IG L  L  LD+S N +TTLP  IG L+ L  L
Sbjct: 225 KEIGKLQCLHSLDLSEN--SLTTLPKEIGKLQCLHSLDLSENSLTTLPKEIGKLQNLSNL 282

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N L + P ++ +
Sbjct: 283 DLSENSLTTLPKEIAK 298



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/195 (38%), Positives = 110/195 (56%), Gaps = 6/195 (3%)

Query: 2   IPESLTARLLNVVVLDVHSNQ--LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE++  RL N+ VLD+ +N+     L   IG L  L+ LD+S N L +LPK I   + L
Sbjct: 129 LPENI-GRLQNLEVLDLSNNRRTFFFLSEKIGDLQSLEKLDLSENSLSTLPKEIGKLQCL 187

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
           + L+ + N L  LP  IG +L  L+ LS+  N++  LP+ +  L  L  LD   N L +L
Sbjct: 188 QSLDLSENSLAILPKEIG-KLQCLRELSLKGNRLKTLPKEIGKLQCLHSLDLSENSLTTL 246

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+++  L  L  L++S+N   L TLP  IG L +L  LD+S N +TTLP  I  L+ L  
Sbjct: 247 PKEIGKLQCLHSLDLSEN--SLTTLPKEIGKLQNLSNLDLSENSLTTLPKEIAKLQNLYD 304

Query: 180 LSLEGNPLVSPPMDV 194
           L L  N L + P ++
Sbjct: 305 LDLRKNSLTTLPKEI 319



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/170 (40%), Positives = 95/170 (55%), Gaps = 3/170 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  N L  LP  IG L  L+ LD+S N L  LPK I   + L EL+   N+L+ LP  
Sbjct: 167 LDLSENSLSTLPKEIGKLQCLQSLDLSENSLAILPKEIGKLQCLRELSLKGNRLKTLPKE 226

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L  L +L ++ N +  LP+ +  L  L  LD   N L +LP+++  L NL  L++S
Sbjct: 227 IG-KLQCLHSLDLSENSLTTLPKEIGKLQCLHSLDLSENSLTTLPKEIGKLQNLSNLDLS 285

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           +N   L TLP  I  L +L +LD+  N +TTLP  IG  + L  L L+ N
Sbjct: 286 EN--SLTTLPKEIAKLQNLYDLDLRKNSLTTLPKEIGKPQNLSNLDLKEN 333



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/161 (40%), Positives = 100/161 (62%), Gaps = 1/161 (0%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           S + +LD+SG  +++LP+ I N ++L EL+   N+L  LP  IG +L NL++L ++ N +
Sbjct: 45  SDVHILDLSGQQIKNLPRQIANLKNLRELDLRDNQLTTLPKEIG-QLHNLQSLDLSSNSL 103

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
             LP+ + HL +L+ LD   N L +LPE++  L NLEVL++S N +    L   IG L S
Sbjct: 104 STLPEEIGHLKNLKKLDLHYNLLITLPENIGRLQNLEVLDLSNNRRTFFFLSEKIGDLQS 163

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L +LD+S N ++TLP  IG L+ LQ L L  N L   P ++
Sbjct: 164 LEKLDLSENSLSTLPKEIGKLQCLQSLDLSENSLAILPKEI 204



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 108/185 (58%), Gaps = 5/185 (2%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V +LD+   Q+K LP  I  L  L+ LD+  N L +LPK I    +L+ L+ + N L  
Sbjct: 46  DVHILDLSGQQIKNLPRQIANLKNLRELDLRDNQLTTLPKEIGQLHNLQSLDLSSNSLST 105

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLN--CLKSLPEDLENLINL 129
           LP+ IG  L NLK L ++ N ++ LP+++  L +L VLD   N      L E + +L +L
Sbjct: 106 LPEEIG-HLKNLKKLDLHYNLLITLPENIGRLQNLEVLDLSNNRRTFFFLSEKIGDLQSL 164

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           E L++S+N   L TLP  IG L  L  LD+S N +  LP  IG L+ L++LSL+GN L +
Sbjct: 165 EKLDLSEN--SLSTLPKEIGKLQCLQSLDLSENSLAILPKEIGKLQCLRELSLKGNRLKT 222

Query: 190 PPMDV 194
            P ++
Sbjct: 223 LPKEI 227


>gi|301767856|ref|XP_002919341.1| PREDICTED: protein LAP2-like isoform 2 [Ailuropoda melanoleuca]
          Length = 1372

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 106/183 (57%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  L
Sbjct: 217 NRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIG-SL 275

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  Y
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADHN--Y 333

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q L
Sbjct: 334 LQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQL 393

Query: 200 SAV 202
           +A+
Sbjct: 394 TAM 396



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 111/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 VVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     +++E+G+SA
Sbjct: 235 LDVSKNNI-----EMIEEGISA 251



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLVSIEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  ++  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNMRTFAADHNYLQQLPPEI 341



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 94/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           MI E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 244 MIEEGISA-CENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP +IG +L N++T + + N +  LP  +    ++ VL    N L++LP
Sbjct: 303 ELDCSFNEVEALPSSIG-QLTNMRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402


>gi|354497491|ref|XP_003510853.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Cricetulus griseus]
 gi|344249840|gb|EGW05944.1| Leucine-rich repeat protein SHOC-2 [Cricetulus griseus]
          Length = 582

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 106/187 (56%), Gaps = 3/187 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L  +  L ++SN+L+ LP  +GCL  L  L +S N L SLP +++N + L  L+   NKL
Sbjct: 122 LTQLTELYLYSNKLQSLPAELGCLLNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 181

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           R++P  + + L +L TL +  N+I  + + + +L  L +L  R N +K LP ++  L NL
Sbjct: 182 REIPPVV-YRLDSLTTLYLRFNRITAVEKDIKNLPKLSMLSIRENKIKQLPAEIGELCNL 240

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
             L+++ N   LE LP  IG    +  LD+ +N++  LPD+IG L  L +L L  N L +
Sbjct: 241 ITLDVAHN--QLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSA 298

Query: 190 PPMDVVE 196
            P  + +
Sbjct: 299 IPRSLAK 305



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 102/185 (55%), Gaps = 12/185 (6%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  +  L+   N+L  LPD
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEVLN 133
           TIG  L +L  L +  N++  +P+SL   ++L  L+   N + +LPE  L +L+ L  L 
Sbjct: 279 TIG-NLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLT 337

Query: 134 ISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNPLV 188
           +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N L 
Sbjct: 338 LARNCFQL-----YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLT 392

Query: 189 SPPMD 193
           S P+D
Sbjct: 393 SLPLD 397



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 2/160 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           ++V L++ +NQL  +P  +  L  L+VL +S NLL+ LP  + N R L EL+   NKL  
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ I + L +L+ L +  N++  LP+ + HLT+L  L    N L  LPE++  L NLE 
Sbjct: 463 LPNEIAY-LKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEE 521

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           L ++ N   L +LP+ + L   L  + +    ++ LP  I
Sbjct: 522 LYLNDN-PNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 560



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 8/177 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 357 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++L+ L ++ N +  LP  L +L  LR LD   N L+SLP ++  L +L
Sbjct: 415 TKIPEDVSG-LVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           + L ++ N   L TLP  IG L +L  L +  N +T LP+ IG L  L++L L  NP
Sbjct: 474 QKLVLTNN--QLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNP 528



 Score = 77.0 bits (188), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N+L  LP++IG LS L  L +  N L ++P+++  C +LEELN   N +  L
Sbjct: 263 ITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTL 322

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+++   L+ L +L++  NC                                        
Sbjct: 323 PESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLS 382

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N L  +PED+  L++LEVL +S N   L+ L
Sbjct: 383 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKL 440

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ +G L  L ELD+  NK+ +LP+ I  L+ LQKL L  N L + P  +
Sbjct: 441 PHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 97/180 (53%), Gaps = 3/180 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N   LD+    +  LP S+  L++L  L +  N L+SLP  +    +L  L  + N L  
Sbjct: 101 NSARLDLSKRSIHALPPSVKELTQLTELYLYSNKLQSLPAELGCLLNLMTLALSENSLTS 160

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LPD++   L  L+ L +  NK+  +P  +  L SL  L  R N + ++ +D++NL  L +
Sbjct: 161 LPDSLD-NLKKLRMLDLRHNKLREIPPVVYRLDSLTTLYLRFNRITAVEKDIKNLPKLSM 219

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L+I +N   ++ LP  IG L +L+ LDV++N++  LP  IG   ++  L L+ N L+  P
Sbjct: 220 LSIREN--KIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLP 277



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 97/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +PESL + L+ +  L +  N  +  P       S +  L++  N +  +P  I    + L
Sbjct: 322 LPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL 381

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP   G    ++  L++  N++  +P+ ++ L SL VL    N LK L
Sbjct: 382 SKLNMKDNQLTSLPLDFG-TWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  L NL  L  L++ +N   LE+LP  I  L  L +L ++ N++TTLP  IG L  L  
Sbjct: 441 PHGLGNLRKLRELDLEEN--KLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTH 498

Query: 180 LSLEGNPLVSPPMDV 194
           L L  N L   P ++
Sbjct: 499 LGLGENLLTHLPEEI 513



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 71/148 (47%), Gaps = 5/148 (3%)

Query: 51  KTIENCRSLEELNANFNK--LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRV 108
           K +  CR       + +K  +  LP ++  EL  L  L +  NK+  LP  L  L +L  
Sbjct: 92  KELNRCREENSARLDLSKRSIHALPPSVK-ELTQLTELYLYSNKLQSLPAELGCLLNLMT 150

Query: 109 LDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           L    N L SLP+ L+NL  L +L++  N   L  +P  +  L SL  L + +N+IT + 
Sbjct: 151 LALSENSLTSLPDSLDNLKKLRMLDLRHN--KLREIPPVVYRLDSLTTLYLRFNRITAVE 208

Query: 169 DSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
             I  L KL  LS+  N +   P ++ E
Sbjct: 209 KDIKNLPKLSMLSIRENKIKQLPAEIGE 236


>gi|296208239|ref|XP_002807054.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 7-like [Callithrix jacchus]
          Length = 1574

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 108/184 (58%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP SIG L  L  LD+S N +E++   I  C +LE+
Sbjct: 236 LPEVLD-QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALED 294

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+QLPD+IG  L  L TL ++ N++ ILP ++ +L+ L   D   N L+SLP 
Sbjct: 295 LLLSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPS 353

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L + +NF  L  LP  IG   ++  + +  NK+  LP+ IG ++KL+ L+
Sbjct: 354 TIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLN 411

Query: 182 LEGN 185
           L  N
Sbjct: 412 LSDN 415



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 108/233 (46%), Gaps = 50/233 (21%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP +I  L  LK LD+S N ++  P+ I+ C+ L 
Sbjct: 96  EELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLT 155

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   L  LR+L+ R N LK+L
Sbjct: 156 IIEASVNPISKLPD--GFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTL 213

Query: 120 PEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELD 158
           P+ +  L  LE L++  N                        L+ LP SIG L  LV LD
Sbjct: 214 PKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD 273

Query: 159 VSYNKITT-----------------------LPDSIGCLRKLQKLSLEGNPLV 188
           +S N+I T                       LPDSIG L+KL  L ++ N L 
Sbjct: 274 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLT 326



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP+SIG L KL  L V  N L  LP TI N   LEE + + N+L  LP TIG+ 
Sbjct: 299 SNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGY- 357

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+TL+++ N +  LP+ +    ++ V+  R N L+ LPE++  +  L VLN+S N  
Sbjct: 358 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDN-- 415

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+ LP+S   L  L  L +S N+   L
Sbjct: 416 RLKNLPFSFTKLKELAALWLSDNQSKAL 443



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 69  LRQLP-DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P +   FE   L+ L ++ N+I  LP+ L +  +LR L    N L +LP  + +L+
Sbjct: 71  LQQVPKEVFNFERT-LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLV 129

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           NL+ L+IS+N   ++  P +I     L  ++ S N I+ LPD    L  L +L L
Sbjct: 130 NLKELDISKNG--VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYL 182



 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 38/61 (62%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP  IG + KL+VL++S N L++LP +    + L  L  + N+ + 
Sbjct: 383 NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKA 442

Query: 72  L 72
           L
Sbjct: 443 L 443


>gi|354474057|ref|XP_003499248.1| PREDICTED: protein LAP2 [Cricetulus griseus]
          Length = 1448

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 105/183 (57%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LDVS N +E + + I  C +L++   + N L+QLPDTIG  L
Sbjct: 217 NRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPDTIG-SL 275

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       NF  
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSVGQLTNIRTFAADHNF-- 333

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q L
Sbjct: 334 LQQLPPEIGNWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQL 393

Query: 200 SAV 202
           +A+
Sbjct: 394 TAM 396



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 110/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG LR+L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLRQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+S 
Sbjct: 235 LDVSKNNI-----EMVEEGIST 251



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 87/144 (60%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP++IG L  +  L +  N L  LP +I   RS+EEL+ +FN++  LP ++G +
Sbjct: 262 SNSLQQLPDTIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSVG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N++T + + N +  LP  + +  ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNIRTFAADHNFLQQLPPEIGNWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 103/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD   N ++ + E +    
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCE 253

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+   +S N   L+ LP +IG L ++  L +  N++  LPDSIG LR +++L    N +
Sbjct: 254 NLQDFLLSSN--SLQQLPDTIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEI 311

Query: 188 VSPPMDV 194
            + P  V
Sbjct: 312 EALPSSV 318



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 76/137 (55%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +P+++ + L NV  L +  NQL  LP+SIG L  ++ LD S N +E+LP ++    ++ 
Sbjct: 267 QLPDTIGS-LKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSVGQLTNIR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNFLQQLPPEIG-NWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|26349893|dbj|BAC38586.1| unnamed protein product [Mus musculus]
          Length = 443

 Score =  100 bits (250), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/214 (36%), Positives = 116/214 (54%), Gaps = 23/214 (10%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 39  LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 97

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 98  LDLGNNEIYNLPESIGA-LLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPE 156

Query: 122 DLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELDVS 160
           ++  L +L  L ISQN                        L  LP +IG   +L EL ++
Sbjct: 157 EISGLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLT 216

Query: 161 YNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N++ TLP SIG L+KL  L+ + N LVS P ++
Sbjct: 217 ENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI 250



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/181 (37%), Positives = 97/181 (53%), Gaps = 3/181 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           + +V LDV  N +  +P SI     L+V D SG+ L  LP++    ++L  L+ N   L+
Sbjct: 1   MQLVELDVSRNDIPEIPESIAFCKALQVADFSGDPLTRLPESFPELQNLTCLSVNDISLQ 60

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ IG  L NL +L +  N +  LP SLT L  L  LD   N + +LPE +  L++L+
Sbjct: 61  SLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLK 119

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +  N   L  LP  IG L +L+ LDVS N++  LP+ I  L  L  L +  N L + 
Sbjct: 120 DLWLDGN--QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLLETI 177

Query: 191 P 191
           P
Sbjct: 178 P 178



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 104/188 (55%), Gaps = 7/188 (3%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N++ LDV  N+L+ LP  I  L+ L  L +S NLLE++P+ I   + L  L  + N+L
Sbjct: 138 LKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRL 197

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            QLP+ IG +  NL  L +  N+++ LP+S+  L  L  L+A  N L SLP+++    +L
Sbjct: 198 TQLPEAIG-DCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSL 256

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN---P 186
            +  I  N   L  LP  +   + L  LDV+ NK+  LP S+  L KL+ L L  N   P
Sbjct: 257 TMFCIRDN--RLTRLPAEVSQAVELHVLDVAGNKLHHLPLSLTTL-KLKALWLSDNQSQP 313

Query: 187 LVSPPMDV 194
           L++   D+
Sbjct: 314 LLTFQTDI 321


>gi|330864711|ref|NP_001179037.2| leucine-rich repeat-containing protein 7 [Bos taurus]
 gi|296489182|tpg|DAA31295.1| TPA: leucine rich repeat containing 7 [Bos taurus]
          Length = 1537

 Score =  100 bits (250), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 109/186 (58%), Gaps = 4/186 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP SIG L  L  LD+S N +E++   I  C +LE+
Sbjct: 199 LPEVLD-QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALED 257

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+QLPD+IG  L  L TL ++ N++ ILP ++ +L+ L   D   N L+SLP 
Sbjct: 258 LLLSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPS 316

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L + +NF  L  LP  IG   ++  + +  NK+  LP+ IG ++KL+ L+
Sbjct: 317 TIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLN 374

Query: 182 LEGNPL 187
           L  N L
Sbjct: 375 LSDNRL 380



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 108/233 (46%), Gaps = 50/233 (21%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP +I  L  LK LD+S N ++  P+ I+ C+ L 
Sbjct: 59  EELPKQLFNCQALKKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   L  LR+L+ R N LK+L
Sbjct: 119 IIEASVNPISKLPD--GFTQLLNLTQLYLNDAFLEFLPANFGRLAKLRILELRENHLKTL 176

Query: 120 PEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELD 158
           P+ +  L  LE L++  N                        L+ LP SIG L  LV LD
Sbjct: 177 PKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD 236

Query: 159 VSYNKITT-----------------------LPDSIGCLRKLQKLSLEGNPLV 188
           +S N+I T                       LPDSIG L+KL  L ++ N L 
Sbjct: 237 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLT 289



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 110/193 (56%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +LLN+  L ++   L+ LP + G L+KL++L++  N L++LPK++     LE 
Sbjct: 130 LPDGFT-QLLNLTQLYLNDAFLEFLPANFGRLAKLRILELRENHLKTLPKSMHKLAQLER 188

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+  +LP+ +  ++ NL+ L ++ N + +LP S+  L  L  LD   N ++++  
Sbjct: 189 LDLGNNEFSELPEVLD-QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDM 247

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           D+     LE L +S N   L+ LP SIGLL  L  L V  N++T LP++IG L  L++  
Sbjct: 248 DISGCEALEDLLLSSNM--LQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFD 305

Query: 182 LEGNPLVSPPMDV 194
              N L S P  +
Sbjct: 306 CSCNELESLPSTI 318



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP+SIG L KL  L V  N L  LP TI N   LEE + + N+L  LP TIG+ 
Sbjct: 262 SNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGY- 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+TL+++ N +  LP+ +    ++ V+  R N L+ LPE++  +  L VLN+S N  
Sbjct: 321 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+ LP+S   L  L  L +S N+   L
Sbjct: 379 RLKNLPFSFTKLKELAALWLSDNQSKAL 406



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 69  LRQLP-DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P +   FE   L+ L ++ N+I  LP+ L +  +L+ L    N L +LP  + +L+
Sbjct: 34  LQQVPKEVFNFERT-LEELYLDANQIEELPKQLFNCQALKKLSIPDNDLSNLPTTIASLV 92

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           NL+ L+IS+N   ++  P +I     L  ++ S N I+ LPD    L  L +L L
Sbjct: 93  NLKELDISKNG--VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYL 145



 Score = 41.2 bits (95), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 38/61 (62%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP  IG + KL+VL++S N L++LP +    + L  L  + N+ + 
Sbjct: 346 NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKA 405

Query: 72  L 72
           L
Sbjct: 406 L 406


>gi|426217976|ref|XP_004003226.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat and IQ
           domain-containing protein 4 [Ovis aries]
          Length = 575

 Score =  100 bits (250), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 112/225 (49%), Gaps = 30/225 (13%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN-- 67
           L N+ VL +  N++  LP+  G LSKLK+L ++GN   S PK I +  SLE+L    +  
Sbjct: 324 LKNLEVLALDDNKICQLPSDFGLLSKLKILGLTGNQFSSFPKEILSLASLEKLYIGQDEG 383

Query: 68  -KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENL 126
            KL  LP+ I   L NLK L I  N +  LP SL  + +L +LD   N +K LP+     
Sbjct: 384 AKLTHLPECIE-RLENLKELYIENNHLEYLPVSLGSMPNLEILDCHCNLIKQLPD----- 437

Query: 127 INLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
                               +I    +L EL    N IT LP+++  L  L+ L+L GNP
Sbjct: 438 --------------------AICQAQALKELRFEDNLITYLPENLDSLVNLKVLTLTGNP 477

Query: 187 LVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWV-GKLVKYG 230
           +  PPM V  +G  AV  YL E+ N    + K ++W  G +V+ G
Sbjct: 478 MEEPPMSVCTKGTEAVWEYLKERRNMKELATKIQAWWRGMMVRRG 522



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 2/99 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  RL N+  L + +N L+ LP S+G +  L++LD   NL++ LP  I   ++L+E
Sbjct: 389 LPECIE-RLENLKELYIENNHLEYLPVSLGSMPNLEILDCHCNLIKQLPDAICQAQALKE 447

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSL 100
           L    N +  LP+ +   L+NLK L++  N +   P S+
Sbjct: 448 LRFEDNLITYLPENLD-SLVNLKVLTLTGNPMEEPPMSV 485



 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 3/137 (2%)

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           ++A+   L  +P  I   L  L+ + +  N I  +P+ + HL  +RVL    N LK+L  
Sbjct: 30  IDASNQSLLTIPADI-LALRELEEVHLENNLIAEIPKDIQHLRKIRVLYLNKNKLKNLCP 88

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI-GCLRKLQKL 180
           ++  L NLE L++S N     +LP   G +  L EL + +  +  +P  I   L  L+ L
Sbjct: 89  EMGRLSNLEGLDLSDNPLEASSLPVLSG-IRQLRELRLYHTDLADIPVVICKLLHHLELL 147

Query: 181 SLEGNPLVSPPMDVVEQ 197
            L GN L S P ++V Q
Sbjct: 148 GLAGNRLKSLPKEIVNQ 164


>gi|158333285|ref|YP_001514457.1| hypothetical protein AM1_0055 [Acaryochloris marina MBIC11017]
 gi|158303526|gb|ABW25143.1| leucine-rich repeat-containing protein [Acaryochloris marina
           MBIC11017]
          Length = 407

 Score =  100 bits (250), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/195 (35%), Positives = 108/195 (55%), Gaps = 4/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+SL  +L  +  LD+  N L  L   +G L++L+ LD+ GN L  LP+ I     L  
Sbjct: 58  LPKSL-GQLTQLQTLDLARNHLPILTEVLGDLTQLRSLDLMGNALVELPEFIGAFSQLRS 116

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N+L  +P +IG +L NL+ L ++ N I   P+ L  LT LR L+     L  +P 
Sbjct: 117 LNLVSNQLVHIPPSIG-KLKNLQELQLSYNPIARWPKELGWLTGLRSLEIASTGLNEIPP 175

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           D ++L  LE LN+S  F +L+TLP  +G    L  LD+S+N++  LP ++G   +L  L 
Sbjct: 176 DWKSLQGLESLNLS--FNHLQTLPEWLGTWTELRSLDLSFNQLKELPATLGSFIQLTSLD 233

Query: 182 LEGNPLVSPPMDVVE 196
           ++ N L S P  + +
Sbjct: 234 IQSNQLQSLPPQICD 248



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/196 (38%), Positives = 105/196 (53%), Gaps = 8/196 (4%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  NQLK LP ++G   +L  LD+  N L+SLP  I +  +L  L A  N+L  LP+ 
Sbjct: 209 LDLSFNQLKELPATLGSFIQLTSLDIQSNQLQSLPPQICDLVNLTSLLAYNNQLTHLPEA 268

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNC-----LKSLPEDLENLINLE 130
           +G  L  L TL +  N I  LP+S+  L +L+ L   L+      L+  P  L     LE
Sbjct: 269 LG-GLAALTTLGMAGNSICQLPESIGELQNLKQLIFNLDPDQPVPLQVFPAGLRGCRLLE 327

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L        L +LP+ IG L  L  L+VS+N +T LP S+G L  L+ L+L  NPL S 
Sbjct: 328 QLTFVAC--ELRSLPHWIGELTQLKSLNVSHNNLTDLPPSLGTLDNLKTLNLSNNPLRSE 385

Query: 191 PMDVVEQGLSAVKGYL 206
              + E+G +A+K YL
Sbjct: 386 LEVLWERGPNAIKSYL 401



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 8/134 (5%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L+N+  L  ++NQL  LP ++G L+ L  L ++GN +  LP++I   ++L++L  N +  
Sbjct: 249 LVNLTSLLAYNNQLTHLPEALGGLAALTTLGMAGNSICQLPESIGELQNLKQLIFNLDPD 308

Query: 70  RQLPDTI------GFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDL 123
           + +P  +      G  L  L+ L+    ++  LP  +  LT L+ L+   N L  LP  L
Sbjct: 309 QPVPLQVFPAGLRGCRL--LEQLTFVACELRSLPHWIGELTQLKSLNVSHNNLTDLPPSL 366

Query: 124 ENLINLEVLNISQN 137
             L NL+ LN+S N
Sbjct: 367 GTLDNLKTLNLSNN 380


>gi|348506994|ref|XP_003441042.1| PREDICTED: leucine-rich repeat-containing protein 1 [Oreochromis
           niloticus]
          Length = 524

 Score =  100 bits (250), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 111/193 (57%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES T  L N+  L ++   L+ LP +IG LS L  L++  N+L  LP+++     LEE
Sbjct: 120 LPESFT-ELRNLTCLSINDISLQLLPGNIGNLSNLVSLELRENVLTFLPESLSQLHKLEE 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+L  LP +IG  L++LK L ++ N +  +P  L ++ SL  LD   N L+ LPE
Sbjct: 179 LDLGNNELYSLPQSIG-HLVSLKDLWLDGNHLTEIPAELGNIKSLLCLDVSENKLEKLPE 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L++L  L +SQN   +++LP SIG L  L  L V  N++  LP+SIG    L +L 
Sbjct: 238 EMGGLVSLTDLLVSQN--NIDSLPESIGKLRKLSILKVDQNQLAYLPESIGNCESLSELV 295

Query: 182 LEGNPLVSPPMDV 194
           L  N L S P  +
Sbjct: 296 LTENQLQSLPRSI 308



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/216 (35%), Positives = 112/216 (51%), Gaps = 25/216 (11%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP  + A  + +V LDV  N +  +P+SI     L+V D SGN L  LP++    R+L 
Sbjct: 73  IIPAEI-ANFMQLVELDVSRNDILGIPDSISHCKALQVADFSGNPLTKLPESFTELRNLT 131

Query: 61  ELNANFNKLRQLPDTIG----------------------FELINLKTLSINCNKIVILPQ 98
            L+ N   L+ LP  IG                       +L  L+ L +  N++  LPQ
Sbjct: 132 CLSINDISLQLLPGNIGNLSNLVSLELRENVLTFLPESLSQLHKLEELDLGNNELYSLPQ 191

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
           S+ HL SL+ L    N L  +P +L N+ +L  L++S+N   LE LP  +G L+SL +L 
Sbjct: 192 SIGHLVSLKDLWLDGNHLTEIPAELGNIKSLLCLDVSEN--KLEKLPEEMGGLVSLTDLL 249

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           VS N I +LP+SIG LRKL  L ++ N L   P  +
Sbjct: 250 VSQNNIDSLPESIGKLRKLSILKVDQNQLAYLPESI 285



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 108/196 (55%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PESL+ +L  +  LD+ +N+L  LP SIG L  LK L + GN L  +P  + N +SL 
Sbjct: 165 FLPESLS-QLHKLEELDLGNNELYSLPQSIGHLVSLKDLWLDGNHLTEIPAELGNIKSLL 223

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+ + NKL +LP+ +G  L++L  L ++ N I  LP+S+  L  L +L    N L  LP
Sbjct: 224 CLDVSENKLEKLPEEMGG-LVSLTDLLVSQNNIDSLPESIGKLRKLSILKVDQNQLAYLP 282

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E + N  +L  L +++N   L++LP SIG L  L  L+   N++ +LP  IG    L   
Sbjct: 283 ESIGNCESLSELVLTEN--QLQSLPRSIGKLKRLFHLNCDRNQLLSLPKEIGGCSSLNVF 340

Query: 181 SLEGNPLVSPPMDVVE 196
            +  N L   P ++ +
Sbjct: 341 CVRENRLTRIPSELSQ 356



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 99/187 (52%), Gaps = 5/187 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            R L  ++LD  +NQL+ LP     L KL+ L +S N ++ +P  I N   L EL+ + N
Sbjct: 35  GRSLEELLLD--ANQLRDLPKQFFQLVKLRKLGLSDNEIQIIPAEIANFMQLVELDVSRN 92

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            +  +PD+I      L+    + N +  LP+S T L +L  L      L+ LP ++ NL 
Sbjct: 93  DILGIPDSIS-HCKALQVADFSGNPLTKLPESFTELRNLTCLSINDISLQLLPGNIGNLS 151

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L + +N   L  LP S+  L  L ELD+  N++ +LP SIG L  L+ L L+GN L
Sbjct: 152 NLVSLELRENV--LTFLPESLSQLHKLEELDLGNNELYSLPQSIGHLVSLKDLWLDGNHL 209

Query: 188 VSPPMDV 194
              P ++
Sbjct: 210 TEIPAEL 216



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/150 (38%), Positives = 83/150 (55%), Gaps = 4/150 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +   L+++  L V  N +  LP SIG L KL +L V  N L  LP++I NC SL E
Sbjct: 235 LPEEMGG-LVSLTDLLVSQNNIDSLPESIGKLRKLSILKVDQNQLAYLPESIGNCESLSE 293

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+L+ LP +IG +L  L  L+ + N+++ LP+ +   +SL V   R N L  +P 
Sbjct: 294 LVLTENQLQSLPRSIG-KLKRLFHLNCDRNQLLSLPKEIGGCSSLNVFCVRENRLTRIPS 352

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLL 151
           +L     L VL++S N   L  LP S+  L
Sbjct: 353 ELSQATELHVLDVSGN--RLTHLPLSLTTL 380



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 108 VLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
           +LDA  N L+ LP+    L+ L  L +S N   ++ +P  I   M LVELDVS N I  +
Sbjct: 42  LLDA--NQLRDLPKQFFQLVKLRKLGLSDN--EIQIIPAEIANFMQLVELDVSRNDILGI 97

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           PDSI   + LQ     GNPL   P    E
Sbjct: 98  PDSISHCKALQVADFSGNPLTKLPESFTE 126


>gi|219520192|gb|AAI44076.1| ERBB2IP protein [Homo sapiens]
          Length = 1419

 Score =  100 bits (250), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 106/184 (57%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N ++ LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEVLPSSIGQLTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 110/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+S 
Sbjct: 235 LDVSKNNI-----EMVEEGIST 251



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  L+  + + N L   P ++
Sbjct: 312 EVLPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I    S+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEVLPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+T + + N +  LP  +    ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++ + L N+  L +  NQL  LP+SIG L  ++ LD S N +E LP +I    +L 
Sbjct: 267 QLPETIGS-LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEVLPSSIGQLTNLR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-SWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|403257784|ref|XP_003921474.1| PREDICTED: leucine-rich repeat-containing protein 7 [Saimiri
           boliviensis boliviensis]
          Length = 1537

 Score =  100 bits (250), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 108/184 (58%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP SIG L  L  LD+S N +E++   I  C +LE+
Sbjct: 199 LPEVLD-QIQNLRELWMDNNALQILPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALED 257

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+QLPD+IG  L  L TL ++ N++ ILP ++ +L+ L   D   N L+SLP 
Sbjct: 258 LLLSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPS 316

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L + +NF  L  LP  IG   ++  + +  NK+  LP+ IG ++KL+ L+
Sbjct: 317 TIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLN 374

Query: 182 LEGN 185
           L  N
Sbjct: 375 LSDN 378



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 108/233 (46%), Gaps = 50/233 (21%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP +I  L  LK LD+S N ++  P+ I+ C+ L 
Sbjct: 59  EELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   L  LR+L+ R N LK+L
Sbjct: 119 IIEASVNPISKLPD--GFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTL 176

Query: 120 PEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELD 158
           P+ +  L  LE L++  N                        L+ LP SIG L  LV LD
Sbjct: 177 PKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQILPGSIGKLKMLVYLD 236

Query: 159 VSYNKITT-----------------------LPDSIGCLRKLQKLSLEGNPLV 188
           +S N+I T                       LPDSIG L+KL  L ++ N L 
Sbjct: 237 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLT 289



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP+SIG L KL  L V  N L  LP TI N   LEE + + N+L  LP TIG+ 
Sbjct: 262 SNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGY- 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+TL+++ N +  LP+ +    ++ V+  R N L+ LPE++  +  L VLN+S N  
Sbjct: 321 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+ LP+S   L  L  L +S N+   L
Sbjct: 379 RLKNLPFSFTKLKELAALWLSDNQSKAL 406



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 69  LRQLP-DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P +   FE   L+ L ++ N+I  LP+ L +  +LR L    N L +LP  + +L+
Sbjct: 34  LQQVPKEVFNFERT-LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLV 92

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           NL+ L+IS+N   ++  P +I     L  ++ S N I+ LPD    L  L +L L
Sbjct: 93  NLKELDISKNG--VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYL 145



 Score = 41.2 bits (95), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 38/61 (62%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP  IG + KL+VL++S N L++LP +    + L  L  + N+ + 
Sbjct: 346 NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKA 405

Query: 72  L 72
           L
Sbjct: 406 L 406


>gi|61806462|ref|NP_001013463.1| leucine-rich repeat-containing protein 1 [Danio rerio]
 gi|60551959|gb|AAH90814.1| Zgc:101523 [Danio rerio]
          Length = 526

 Score =  100 bits (250), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/193 (37%), Positives = 111/193 (57%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L ++   L+ LP++IG L  L  L++  NLL  LP+++   + LEE
Sbjct: 120 LPESF-PELRNLACLSINDISLQALPDNIGNLCNLVSLELRENLLTYLPESLSQLQKLEE 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+L  LP+TIG  L++LK L ++ N++  +P  +  + SL  LD   N L+ LPE
Sbjct: 179 LDVGSNELYNLPETIGC-LVSLKDLWLDGNQLSDIPAEVGSMRSLTCLDVSENKLERLPE 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++ NL++L  L +SQN   ++ LP  IG L  L  L    N++  LP+SIG    L +L 
Sbjct: 238 EMGNLLSLTDLLVSQNL--IDLLPEGIGKLKRLSILKADQNRLVQLPESIGHCESLTELV 295

Query: 182 LEGNPLVSPPMDV 194
           L  N LV+ P  +
Sbjct: 296 LTENQLVNLPRSI 308



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/177 (36%), Positives = 99/177 (55%), Gaps = 3/177 (1%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           + +NQL+ LP     L+KL+ L +S N ++ LP  I N   L EL+ + N + +LP++I 
Sbjct: 43  LDANQLRDLPKPFFNLTKLRKLGLSDNEIQRLPGDIANFNQLVELDISRNDIMELPESIS 102

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
           +    L+    + N +  LP+S   L +L  L      L++LP+++ NL NL  L + +N
Sbjct: 103 Y-CKTLQVADFSGNPLTRLPESFPELRNLACLSINDISLQALPDNIGNLCNLVSLELREN 161

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
              L  LP S+  L  L ELDV  N++  LP++IGCL  L+ L L+GN L   P +V
Sbjct: 162 L--LTYLPESLSQLQKLEELDVGSNELYNLPETIGCLVSLKDLWLDGNQLSDIPAEV 216



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 106/190 (55%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PESL+ +L  +  LDV SN+L  LP +IGCL  LK L + GN L  +P  + + RSL  
Sbjct: 166 LPESLS-QLQKLEELDVGSNELYNLPETIGCLVSLKDLWLDGNQLSDIPAEVGSMRSLTC 224

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + NKL +LP+ +G  L++L  L ++ N I +LP+ +  L  L +L A  N L  LPE
Sbjct: 225 LDVSENKLERLPEEMG-NLLSLTDLLVSQNLIDLLPEGIGKLKRLSILKADQNRLVQLPE 283

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + +  +L  L +++N   L  LP SIG L  L   +   N++ +LP  IG    L  L 
Sbjct: 284 SIGHCESLTELVLTEN--QLVNLPRSIGKLKKLSNFNCDRNRLASLPKEIGGCCSLNVLC 341

Query: 182 LEGNPLVSPP 191
           +  N L+  P
Sbjct: 342 VRENRLMRIP 351



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 120/244 (49%), Gaps = 32/244 (13%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +V LD+  N +  LP SI     L+V D SGN L  LP++    R+L  L+ N   L+ L
Sbjct: 84  LVELDISRNDIMELPESISYCKTLQVADFSGNPLTRLPESFPELRNLACLSINDISLQAL 143

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE-- 130
           PD IG  L NL +L +  N +  LP+SL+ L  L  LD   N L +LPE +  L++L+  
Sbjct: 144 PDNIG-NLCNLVSLELRENLLTYLPESLSQLQKLEELDVGSNELYNLPETIGCLVSLKDL 202

Query: 131 ---------------------VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPD 169
                                 L++S+N   LE LP  +G L+SL +L VS N I  LP+
Sbjct: 203 WLDGNQLSDIPAEVGSMRSLTCLDVSEN--KLERLPEEMGNLLSLTDLLVSQNLIDLLPE 260

Query: 170 SIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKY 229
            IG L++L  L  + N LV  P + +    S  +  L+E  N     P+    +GKL K 
Sbjct: 261 GIGKLKRLSILKADQNRLVQLP-ESIGHCESLTELVLTE--NQLVNLPRS---IGKLKKL 314

Query: 230 GTFN 233
             FN
Sbjct: 315 SNFN 318



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 2/138 (1%)

Query: 57  RSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
           R +E ++     L  +PD I     +L+ L ++ N++  LP+   +LT LR L    N +
Sbjct: 12  RHIEAIDRRHCSLLFVPDEIYRYRGSLEELLLDANQLRDLPKPFFNLTKLRKLGLSDNEI 71

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + LP D+ N   L  L+IS+N   +  LP SI    +L   D S N +T LP+S   LR 
Sbjct: 72  QRLPGDIANFNQLVELDISRN--DIMELPESISYCKTLQVADFSGNPLTRLPESFPELRN 129

Query: 177 LQKLSLEGNPLVSPPMDV 194
           L  LS+    L + P ++
Sbjct: 130 LACLSINDISLQALPDNI 147


>gi|359683881|ref|ZP_09253882.1| lipoprotein [Leptospira santarosai str. 2000030832]
          Length = 440

 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 104/174 (59%), Gaps = 3/174 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           ++V +L + SNQL  LP  IG L KL+ L++  N   +LP+ I   ++L+ L+   N+L 
Sbjct: 38  MDVRILYLESNQLTTLPQEIGRLQKLEELNLRNNQFTALPQEIGTLQNLQSLSLESNRLE 97

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG  L NLK LS+  N +  LP+ +  L +L+ LD   N L+SLP+++  L NL+
Sbjct: 98  GLPKEIG-RLQNLKRLSLVNNHLTTLPKEIGMLQNLQNLDLIYNRLESLPKEIGQLQNLK 156

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEG 184
            L +  N  +L TLP  I  L +L  L +S N++T LP  IG L+KL+ L+L G
Sbjct: 157 RLYLVDN--HLTTLPQEIWQLENLQTLSISGNQLTILPKEIGTLQKLEDLNLSG 208



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 102/187 (54%), Gaps = 5/187 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L + SN+L+ LP  IG L  LK L +  N L +LPK I   ++L+ L+  +N
Sbjct: 81  GTLQNLQSLSLESNRLEGLPKEIGRLQNLKRLSLVNNHLTTLPKEIGMLQNLQNLDLIYN 140

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NLK L +  N +  LPQ +  L +L+ L    N L  LP+++  L 
Sbjct: 141 RLESLPKEIG-QLQNLKRLYLVDNHLTTLPQEIWQLENLQTLSISGNQLTILPKEIGTLQ 199

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE LN+S     L   P  IG L +L  L +S N++TT P  IG L+ L++L L    L
Sbjct: 200 KLEDLNLSG----LAVFPQEIGTLQNLKGLYLSNNRLTTFPQEIGTLQNLKELYLSSTQL 255

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 256 TTFPKEI 262



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 80/231 (34%), Positives = 109/231 (47%), Gaps = 47/231 (20%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  L + +N L  LP  IG L  L+ LD+  N LESLPK I   ++L+ L    N
Sbjct: 104 GRLQNLKRLSLVNNHLTTLPKEIGMLQNLQNLDLIYNRLESLPKEIGQLQNLKRLYLVDN 163

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP  I ++L NL+TLSI+ N++ ILP+ +  L  L   D  L+ L   P+++  L 
Sbjct: 164 HLTTLPQEI-WQLENLQTLSISGNQLTILPKEIGTLQKLE--DLNLSGLAVFPQEIGTLQ 220

Query: 128 NLEVLNISQN----------------------------------FQYLE----------T 143
           NL+ L +S N                                   Q LE          T
Sbjct: 221 NLKGLYLSNNRLTTFPQEIGTLQNLKELYLSSTQLTTFPKEIGQLQKLEELYLPSTQLVT 280

Query: 144 LPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L   IG L +L  LD+S N+ TT P  IG LRKL+ L LE N L + P ++
Sbjct: 281 LSQEIGQLQNLKLLDLSDNQFTTFPKEIGKLRKLEYLFLEHNRLTTLPKEI 331



 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 85/184 (46%), Gaps = 26/184 (14%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           S QL  L   IG L  LK+LD+S N   + PK I   R LE L    N+L  LP  IG  
Sbjct: 275 STQLVTLSQEIGQLQNLKLLDLSDNQFTTFPKEIGKLRKLEYLFLEHNRLTTLPKEIG-T 333

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L  LK L++  N++  L + +  L +L+ L+ R N L  LP++                 
Sbjct: 334 LQRLKLLNLYNNRLTTLSEEIVGLQNLKNLNLRNNRLTVLPQE----------------- 376

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGL 199
                   IG L +L +LD+S N  TT P  I  L+ LQ L LE  P +    + + + L
Sbjct: 377 --------IGQLQNLKDLDLSGNPFTTFPQEIVGLKHLQILRLENIPALLSKKETIRKLL 428

Query: 200 SAVK 203
             VK
Sbjct: 429 PDVK 432



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 3/86 (3%)

Query: 110 DARLN-CLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           DA  N   +   E L+N +++ +L +  N   L TLP  IG L  L EL++  N+ T LP
Sbjct: 20  DAEKNKVYRDFNEALKNAMDVRILYLESN--QLTTLPQEIGRLQKLEELNLRNNQFTALP 77

Query: 169 DSIGCLRKLQKLSLEGNPLVSPPMDV 194
             IG L+ LQ LSLE N L   P ++
Sbjct: 78  QEIGTLQNLQSLSLESNRLEGLPKEI 103



 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 71/128 (55%), Gaps = 1/128 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +LD+  NQ    P  IG L KL+ L +  N L +LPK I   + L+ LN   N
Sbjct: 286 GQLQNLKLLDLSDNQFTTFPKEIGKLRKLEYLFLEHNRLTTLPKEIGTLQRLKLLNLYNN 345

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  L + I   L NLK L++  N++ +LPQ +  L +L+ LD   N   + P+++  L 
Sbjct: 346 RLTTLSEEI-VGLQNLKNLNLRNNRLTVLPQEIGQLQNLKDLDLSGNPFTTFPQEIVGLK 404

Query: 128 NLEVLNIS 135
           +L++L + 
Sbjct: 405 HLQILRLE 412



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 2/97 (2%)

Query: 98  QSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVEL 157
           ++L +   +R+L    N L +LP+++  L  LE LN+  N      LP  IG L +L  L
Sbjct: 32  EALKNAMDVRILYLESNQLTTLPQEIGRLQKLEELNLRNN--QFTALPQEIGTLQNLQSL 89

Query: 158 DVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            +  N++  LP  IG L+ L++LSL  N L + P ++
Sbjct: 90  SLESNRLEGLPKEIGRLQNLKRLSLVNNHLTTLPKEI 126


>gi|281341775|gb|EFB17359.1| hypothetical protein PANDA_007969 [Ailuropoda melanoleuca]
          Length = 1412

 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 106/183 (57%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  L
Sbjct: 217 NRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIG-SL 275

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  Y
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADHN--Y 333

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q L
Sbjct: 334 LQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQL 393

Query: 200 SAV 202
           +A+
Sbjct: 394 TAM 396



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 112/204 (54%), Gaps = 13/204 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 VVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSAVK 203
           L +  N +     +++E+G+SA +
Sbjct: 235 LDVSKNNI-----EMIEEGISACE 253



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLVSIEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  ++  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNMRTFAADHNYLQQLPPEI 341



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 94/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           MI E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 244 MIEEGISA-CENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP +IG +L N++T + + N +  LP  +    ++ VL    N L++LP
Sbjct: 303 ELDCSFNEVEALPSSIG-QLTNMRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402


>gi|402871707|ref|XP_003899795.1| PREDICTED: protein LAP2 isoform 2 [Papio anubis]
          Length = 1418

 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 111/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 VVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+SA
Sbjct: 235 LDVSKNNI-----EMVEEGISA 251



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  ++  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNIRTFAADHNYLQQLPPEI 341



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 94/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+ E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 244 MVEEGISA-CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP +IG +L N++T + + N +  LP  +    ++ VL    N L++LP
Sbjct: 303 ELDCSFNEVEALPSSIG-QLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402


>gi|113677869|ref|NP_001038251.1| leucine-rich repeat protein SHOC-2 [Danio rerio]
 gi|123888175|sp|Q1L8Y7.1|SHOC2_DANRE RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|94732359|emb|CAK04058.1| novel protein similar to vertebrate soc-2 suppressor of clear
           homolog (C. elegans) (SHOC2) [Danio rerio]
 gi|161611878|gb|AAI55580.1| Si:ch211-197i12.3 [Danio rerio]
          Length = 561

 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 112/196 (57%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+   L  +  L ++SN+L+ LP  +GCLS L  L +S N L SLP +++N + L 
Sbjct: 93  LLPSSI-KELTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPDSLDNLKKLR 151

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKLR++P  + + + +L TL +  N+I  + + + +L+ L +L  R N +K LP
Sbjct: 152 MLDLRHNKLREIPAVV-YRVSSLTTLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLP 210

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG    +  LD+ +N +  LP++IG L  + +L
Sbjct: 211 AEIGELCNLITLDVAHN--QLEHLPKEIGNCTQITNLDLQHNDLLDLPETIGNLASINRL 268

Query: 181 SLEGNPLVSPPMDVVE 196
            L  N L + P  + +
Sbjct: 269 GLRYNRLSAIPRSLAK 284



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 91/160 (56%), Gaps = 2/160 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           ++V L++ +NQL  +P  I  L  L++L +S NLL+ LP  I N R L EL+   NKL  
Sbjct: 382 SMVELNLATNQLTKIPEDICGLVSLEMLTLSNNLLKKLPYGIGNLRKLRELDLEENKLES 441

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ I + L +L+ L +  N++  LP+ + HLT+L  L    N L+ LPE++  L NLE 
Sbjct: 442 LPNEIAY-LKDLQKLVLTNNQLTTLPRGIGHLTNLTYLGLGENLLQHLPEEIGTLENLED 500

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           L ++ N   L +LP+ + L   L  + +    ++ LP  I
Sbjct: 501 LYLNDN-PNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 539



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 107/230 (46%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N L  LP +IG L+ +  L +  N L ++P+++  CR LEELN   N +  L
Sbjct: 242 ITNLDLQHNDLLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVL 301

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+ +   L+NL +L++  NC                                        
Sbjct: 302 PEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLS 361

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N L  +PED+  L++LE+L +S N   L+ L
Sbjct: 362 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDICGLVSLEMLTLSNNL--LKKL 419

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           PY IG L  L ELD+  NK+ +LP+ I  L+ LQKL L  N L + P  +
Sbjct: 420 PYGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 469



 Score = 77.8 bits (190), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 100/183 (54%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N + LD+    +  LP+SI  L++L  L +  N L+SLP  +     L  L  + N L  
Sbjct: 80  NSMRLDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTS 139

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LPD++   L  L+ L +  NK+  +P  +  ++SL  L  R N + ++ +D++NL  L +
Sbjct: 140 LPDSLD-NLKKLRMLDLRHNKLREIPAVVYRVSSLTTLYLRFNRITTVEKDIKNLSKLTM 198

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L+I +N   ++ LP  IG L +L+ LDV++N++  LP  IG   ++  L L+ N L+  P
Sbjct: 199 LSIREN--KIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLP 256

Query: 192 MDV 194
             +
Sbjct: 257 ETI 259



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 100/187 (53%), Gaps = 12/187 (6%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           + +L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  +  L+   N L  L
Sbjct: 196 LTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDL 255

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEV 131
           P+TIG  L ++  L +  N++  +P+SL     L  L+   N +  LPE  L +L+NL  
Sbjct: 256 PETIG-NLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTS 314

Query: 132 LNISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNP 186
           L +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N 
Sbjct: 315 LTLARNCFQS-----YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQ 369

Query: 187 LVSPPMD 193
           L S P+D
Sbjct: 370 LTSLPLD 376



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 96/177 (54%), Gaps = 8/177 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 336 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 393

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ I   L++L+ L+++ N +  LP  + +L  LR LD   N L+SLP ++  L +L
Sbjct: 394 TKIPEDI-CGLVSLEMLTLSNNLLKKLPYGIGNLRKLRELDLEENKLESLPNEIAYLKDL 452

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           + L ++ N   L TLP  IG L +L  L +  N +  LP+ IG L  L+ L L  NP
Sbjct: 453 QKLVLTNN--QLTTLPRGIGHLTNLTYLGLGENLLQHLPEEIGTLENLEDLYLNDNP 507



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 97/196 (49%), Gaps = 5/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRS 58
           ++PE L + L+N+  L +  N  +  P       S +  L++  N +  +P  I    + 
Sbjct: 300 VLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKV 359

Query: 59  LEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKS 118
           L +LN   N+L  LP   G    ++  L++  N++  +P+ +  L SL +L    N LK 
Sbjct: 360 LSKLNMKDNQLTSLPLDFG-TWTSMVELNLATNQLTKIPEDICGLVSLEMLTLSNNLLKK 418

Query: 119 LPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQ 178
           LP  + NL  L  L++ +N   LE+LP  I  L  L +L ++ N++TTLP  IG L  L 
Sbjct: 419 LPYGIGNLRKLRELDLEEN--KLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLT 476

Query: 179 KLSLEGNPLVSPPMDV 194
            L L  N L   P ++
Sbjct: 477 YLGLGENLLQHLPEEI 492


>gi|431838264|gb|ELK00196.1| Leucine-rich repeat-containing protein 1 [Pteropus alecto]
          Length = 489

 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 111/193 (57%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 85  LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 143

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 144 LDLGNNEIYSLPESIG-ALLHLKDLWLDGNQLSELPQEVGNLKNLLCLDVSENRLERLPE 202

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L  L ISQN   LE +P  IG L  L  L V  N++T LP+++G    L +L 
Sbjct: 203 EISGLTSLTDLVISQNL--LEIIPEGIGKLKKLSILKVDQNRLTQLPETVGDCESLTELV 260

Query: 182 LEGNPLVSPPMDV 194
           L  N L++ P  +
Sbjct: 261 LTENRLLTLPKSI 273



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/196 (35%), Positives = 104/196 (53%), Gaps = 8/196 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP++    ++L  L+ N  
Sbjct: 44  ANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDI 103

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD   N + SLPE +  L+
Sbjct: 104 SLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALL 162

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L +  N   L  LP  +G L +L+ LDVS N++  LP+ I  L  L  L +  N L
Sbjct: 163 HLKDLWLDGN--QLSELPQEVGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLL 220

Query: 188 VSPPMDVVEQGLSAVK 203
                +++ +G+  +K
Sbjct: 221 -----EIIPEGIGKLK 231



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 110/194 (56%), Gaps = 5/194 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L+ +  L +  N+++ LP  I    +L  LDVS N +  +P++I  C++L+  + + N 
Sbjct: 22  QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNP 81

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L +LP++   EL NL  LS+N   +  LP+++ +L +L  L+ R N L  LP+ L  L  
Sbjct: 82  LTRLPESFP-ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRR 140

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           LE L++  N  Y  +LP SIG L+ L +L +  N+++ LP  +G L+ L  L +  N L 
Sbjct: 141 LEELDLGNNEIY--SLPESIGALLHLKDLWLDGNQLSELPQEVGNLKNLLCLDVSENRLE 198

Query: 189 SPPMDVVEQGLSAV 202
             P ++   GL+++
Sbjct: 199 RLPEEI--SGLTSL 210



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 103/188 (54%), Gaps = 7/188 (3%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N++ LDV  N+L+ LP  I  L+ L  L +S NLLE +P+ I   + L  L  + N+L
Sbjct: 184 LKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEIIPEGIGKLKKLSILKVDQNRL 243

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            QLP+T+G +  +L  L +  N+++ LP+S+  L  L  L+A  N L SLP+++    +L
Sbjct: 244 TQLPETVG-DCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLMSLPKEIGGCCSL 302

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN---P 186
            V  +  N   L  +P  +     L  LDV+ N++  LP S+  L KL+ L L  N   P
Sbjct: 303 TVFCVRDN--RLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTAL-KLKALWLSDNQSQP 359

Query: 187 LVSPPMDV 194
           L++   D+
Sbjct: 360 LLTFQTDI 367



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 71/137 (51%), Gaps = 3/137 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IPE +  +L  + +L V  N+L  LP ++G    L  L ++ N L +LPK+I   + L 
Sbjct: 222 IIPEGI-GKLKKLSILKVDQNRLTQLPETVGDCESLTELVLTENRLLTLPKSIGKLKKLS 280

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            LNA+ NKL  LP  IG    +L    +  N++  +P  ++  T L VLD   N L  LP
Sbjct: 281 NLNADRNKLMSLPKEIGG-CCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLP 339

Query: 121 EDLENLINLEVLNISQN 137
             L  L  L+ L +S N
Sbjct: 340 LSLTAL-KLKALWLSDN 355



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 30/150 (20%)

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVIL-----------------------PQSLTHLT 104
           +LRQ      F+L+ L+ L ++ N+I  L                       P+S++   
Sbjct: 16  QLRQF-----FQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCK 70

Query: 105 SLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
           +L++ D   N L  LPE    L NL  L++  N   L++LP +IG L +L  L++  N +
Sbjct: 71  ALQIADFSGNPLTRLPESFPELQNLTCLSV--NDISLQSLPENIGNLYNLASLELRENLL 128

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           T LPDS+  LR+L++L L  N + S P  +
Sbjct: 129 TYLPDSLTQLRRLEELDLGNNEIYSLPESI 158


>gi|347963067|ref|XP_311104.5| AGAP000054-PA [Anopheles gambiae str. PEST]
 gi|333467375|gb|EAA06225.6| AGAP000054-PA [Anopheles gambiae str. PEST]
          Length = 1593

 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 110/193 (56%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P   T +L N+ VL ++   L  LP   GCLSKL  L++  NLL++LP++I     LE 
Sbjct: 121 LPAGFT-QLRNLTVLGLNDMSLISLPQDFGCLSKLVSLELRENLLKNLPESISQLTKLER 179

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++ +LP  +G+ L +L+ L ++ N+++ LP  +  L  L  LD   N L+ LPE
Sbjct: 180 LDLGDNEIDELPSHVGY-LPSLQELWLDHNQLLRLPPEIGLLKKLVCLDVSENRLEELPE 238

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L  L  L++SQN   LETLP  I  L +L  L +  N++ TL DSIGC   +Q+L 
Sbjct: 239 EIGGLECLTDLHLSQNL--LETLPNGISKLTNLSILKLDQNRLHTLNDSIGCCVHMQELI 296

Query: 182 LEGNPLVSPPMDV 194
           L  N L   P  V
Sbjct: 297 LTENFLSELPATV 309



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 99/197 (50%), Gaps = 24/197 (12%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTI--- 76
           +N ++ LP     L +L+ L +S N +  +P  I+N  +L EL+ + N++  +P+ I   
Sbjct: 46  ANHIRDLPKGFFRLYRLRKLGLSDNDIIKIPSDIQNFVNLVELDVSRNEIGDIPEDIKHL 105

Query: 77  ------------------GF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK 117
                             GF +L NL  L +N   ++ LPQ    L+ L  L+ R N LK
Sbjct: 106 RSLQIADFSSNPISRLPAGFTQLRNLTVLGLNDMSLISLPQDFGCLSKLVSLELRENLLK 165

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
           +LPE +  L  LE L++  N   ++ LP  +G L SL EL + +N++  LP  IG L+KL
Sbjct: 166 NLPESISQLTKLERLDLGDN--EIDELPSHVGYLPSLQELWLDHNQLLRLPPEIGLLKKL 223

Query: 178 QKLSLEGNPLVSPPMDV 194
             L +  N L   P ++
Sbjct: 224 VCLDVSENRLEELPEEI 240



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 95/188 (50%), Gaps = 5/188 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           NQL  LP  IG L KL  LDVS N LE LP+ I     L +L+ + N L  LP+ I  +L
Sbjct: 208 NQLLRLPPEIGLLKKLVCLDVSENRLEELPEEIGGLECLTDLHLSQNLLETLPNGIS-KL 266

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            NL  L ++ N++  L  S+     ++ L    N L  LP  + N++ L  LN+ +N   
Sbjct: 267 TNLSILKLDQNRLHTLNDSIGCCVHMQELILTENFLSELPATVGNMLVLNNLNVDRN--S 324

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLS 200
           L  +P  +G    L  L +  NK+T LP  +G   +L  L + GN L   P  +V   L 
Sbjct: 325 LVAVPSELGNCRQLGVLSLRENKLTRLPAELGNCGELHVLDVSGNLLQHLPYSLVNLQLK 384

Query: 201 AVKGYLSE 208
           AV  +LSE
Sbjct: 385 AV--WLSE 390



 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 58/162 (35%), Positives = 79/162 (48%), Gaps = 26/162 (16%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIEN-------------- 55
           L  +V LDV  N+L+ LP  IG L  L  L +S NLLE+LP  I                
Sbjct: 220 LKKLVCLDVSENRLEELPEEIGGLECLTDLHLSQNLLETLPNGISKLTNLSILKLDQNRL 279

Query: 56  ---------CRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSL 106
                    C  ++EL    N L +LP T+G  L+ L  L+++ N +V +P  L +   L
Sbjct: 280 HTLNDSIGCCVHMQELILTENFLSELPATVGNMLV-LNNLNVDRNSLVAVPSELGNCRQL 338

Query: 107 RVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSI 148
            VL  R N L  LP +L N   L VL++S N   L+ LPYS+
Sbjct: 339 GVLSLRENKLTRLPAELGNCGELHVLDVSGNL--LQHLPYSL 378



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++L N+ +L +  N+L  L +SIGC   ++ L ++ N L  LP T+ N   L  LN + N
Sbjct: 264 SKLTNLSILKLDQNRLHTLNDSIGCCVHMQELILTENFLSELPATVGNMLVLNNLNVDRN 323

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  +P  +G     L  LS+  NK+  LP  L +   L VLD   N L+ LP  L NL 
Sbjct: 324 SLVAVPSELG-NCRQLGVLSLRENKLTRLPAELGNCGELHVLDVSGNLLQHLPYSLVNL- 381

Query: 128 NLEVLNISQN 137
            L+ + +S+N
Sbjct: 382 QLKAVWLSEN 391



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 2/137 (1%)

Query: 57  RSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
           R +E ++   + L  +P+ I     +L+ L ++ N I  LP+    L  LR L    N +
Sbjct: 13  RQIEYVDNRHSSLPNVPEEIFRYSNSLEELLLDANHIRDLPKGFFRLYRLRKLGLSDNDI 72

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
             +P D++N +NL  L++S+N   +  +P  I  L SL   D S N I+ LP     LR 
Sbjct: 73  IKIPSDIQNFVNLVELDVSRN--EIGDIPEDIKHLRSLQIADFSSNPISRLPAGFTQLRN 130

Query: 177 LQKLSLEGNPLVSPPMD 193
           L  L L    L+S P D
Sbjct: 131 LTVLGLNDMSLISLPQD 147


>gi|395825404|ref|XP_003785925.1| PREDICTED: protein LAP2 isoform 2 [Otolemur garnettii]
          Length = 1420

 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 106/183 (57%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  L
Sbjct: 217 NRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIG-SL 275

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  LTS+  LD   N +++LP  +  L N+       N  Y
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTFAADHN--Y 333

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+  LP+ +G ++KL+ ++L  N L + P    + Q L
Sbjct: 334 LQQLPPEIGSWKNITVLFLHSNKLEILPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQL 393

Query: 200 SAV 202
           +A+
Sbjct: 394 TAM 396



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 106/187 (56%), Gaps = 10/187 (5%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L  + A+ N + +LPD 
Sbjct: 74  LSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPD- 132

Query: 76  IGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            GF +L+NL  L +N   +  LP +   LT L++L+ R N LK LP+ +  L  LE L++
Sbjct: 133 -GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDL 191

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N ++ E +P  +  L  L E  +  N++T +P  IG L++L  L +  N +     ++
Sbjct: 192 GSN-EFTE-VPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNI-----EM 244

Query: 195 VEQGLSA 201
           +E+G+SA
Sbjct: 245 IEEGISA 251



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLTSIEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP S+G L  ++  + + N L   P ++
Sbjct: 312 EALPSSVGQLTNIRTFAADHNYLQQLPPEI 341



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 93/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           MI E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 244 MIEEGISA-CENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLTSIE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP ++G +L N++T + + N +  LP  +    ++ VL    N L+ LP
Sbjct: 303 ELDCSFNEVEALPSSVG-QLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLEILP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402


>gi|24215147|ref|NP_712628.1| hypothetical protein LA_2447 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074466|ref|YP_005988783.1| hypothetical protein LIF_A2008 [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196215|gb|AAN49646.1| hypothetical protein LA_2447 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458255|gb|AER02800.1| hypothetical protein LIF_A2008 [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 498

 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 106/184 (57%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++   +L  LP  IG L  L+ L++  NLL  LPK I    +L+EL+   N+L 
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLA 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
             P  I  EL  L++L ++ N+++ILP  +  L +L+ L    N L + P+++  L NL+
Sbjct: 108 TFPAVI-VELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +S+N   L  LP  IG L +L  LD+  N+ T LP  IG L+ LQ L+L  N L + 
Sbjct: 167 KLWLSEN--RLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATL 224

Query: 191 PMDV 194
           P+++
Sbjct: 225 PVEI 228



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 104/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQL   P  I  L KL+ LD+S N L  LP  I   ++L++L    N
Sbjct: 91  GQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKN 150

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL   P  IG +L NL+ L ++ N++  LP+ +  L +L+ LD + N    LP+++  L 
Sbjct: 151 KLTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQ 209

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+S N   L TLP  IG L +L EL +  N++T  P  IG L+ LQ L    N L
Sbjct: 210 NLQTLNLSDN--QLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRL 267

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 268 TALPKEM 274



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/197 (36%), Positives = 106/197 (53%), Gaps = 9/197 (4%)

Query: 4   ESLTA------RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCR 57
           E LTA      +L N+  L++  N L  LP  IG L  L+ LD+  N L + P  I   +
Sbjct: 58  EKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPAVIVELQ 117

Query: 58  SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK 117
            LE L+ + N+L  LP+ IG  L NL+ L +  NK+   P+ +  L +L+ L    N L 
Sbjct: 118 KLESLDLSENRLIILPNEIG-RLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLT 176

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
           +LP+++  L NL+ L++  N      LP  IG L +L  L++S N++ TLP  IG L+ L
Sbjct: 177 ALPKEIGQLKNLQTLDLQDN--QFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNL 234

Query: 178 QKLSLEGNPLVSPPMDV 194
           Q+L L  N L   P ++
Sbjct: 235 QELYLRNNRLTVFPKEI 251



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 98/178 (55%), Gaps = 8/178 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  N+L  LP  IG L  L+ LD+  N    LPK I   ++L+ LN + N
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDN 219

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +  N++ + P+ +  L +L++L +  N L +LP+++  L 
Sbjct: 220 QLATLPVEIG-QLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQ 278

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ LN+  N   L   P  IG L +L +L++  N     P S+   +++QKL  + N
Sbjct: 279 NLQTLNLVNN--RLTVFPKEIGQLQNLQDLELLMN-----PLSLKERKRIQKLFPDSN 329



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/150 (36%), Positives = 78/150 (52%), Gaps = 6/150 (4%)

Query: 36  LKVLDVS---GNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNK 92
           LKV ++S    +  +S PK I   R+L  LN        LP  I   L NLK L++  N 
Sbjct: 352 LKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEIS-RLKNLKYLALGLNG 410

Query: 93  IVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLM 152
           +  +P  +  L +L  L+   N L+ LP+++  L NL+ L++ QN   L+  P  I  L 
Sbjct: 411 LKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQN--TLKIFPAEIEQLK 468

Query: 153 SLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
            L +LD+S N+ TT P  IG L  LQ L+L
Sbjct: 469 KLQKLDLSVNQFTTFPKEIGKLENLQTLNL 498



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 1/123 (0%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L+++      LP  I  L  LK L +  N L+++P  I   ++LE LN   N+L +
Sbjct: 377 NLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELER 436

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ LS++ N + I P  +  L  L+ LD  +N   + P+++  L NL+ 
Sbjct: 437 LPKEIG-QLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQT 495

Query: 132 LNI 134
           LN+
Sbjct: 496 LNL 498



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 116/278 (41%), Gaps = 61/278 (21%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + +N+L   P  IG L  L++L    N L +LPK +   ++L+ LN   N
Sbjct: 229 GQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNN 288

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVI-------------------------------- 95
           +L   P  IG +L NL+ L +  N + +                                
Sbjct: 289 RLTVFPKEIG-QLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLA 347

Query: 96  --------------------LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
                                P+ +    +LR L+       +LP+++  L NL+ L + 
Sbjct: 348 QEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALG 407

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            N   L+ +P  IG L +L  L++  N++  LP  IG LR LQKLSL  N L   P + +
Sbjct: 408 LN--GLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAE-I 464

Query: 196 EQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFN 233
           EQ     K  LS  +N     PK+   +GKL    T N
Sbjct: 465 EQLKKLQKLDLS--VNQFTTFPKE---IGKLENLQTLN 497



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L + L+N +++ VLN+S   + L  LP  IG L +L EL++ +N +T LP  IG L  
Sbjct: 38  RDLTKALQNPLDVRVLNLSG--EKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLEN 95

Query: 177 LQKLSLEGNPLVSPPMDVVE 196
           LQ+L L  N L + P  +VE
Sbjct: 96  LQELDLRDNQLATFPAVIVE 115



 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 2/87 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP  +  +L N+  L++ +N+L+ LP  IG L  L+ L +  N L+  P  IE  + L++
Sbjct: 414 IPSEI-GQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQK 472

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSI 88
           L+ + N+    P  IG +L NL+TL++
Sbjct: 473 LDLSVNQFTTFPKEIG-KLENLQTLNL 498


>gi|418744843|ref|ZP_13301188.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794174|gb|EKR92084.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 511

 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 107/186 (57%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  LDV +NQL  LPN I  L  LK L +  N L  LP+ I    +L+ L  + N+
Sbjct: 220 QLQNLEDLDVSNNQLVTLPNEIWKLQNLKWLYLDDNQLTVLPQEIGQLENLDSLILSNNQ 279

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  IG  L  L+ L+++ N++  LPQ +  L  L  L+   N L +LP++++ L N
Sbjct: 280 LTTLPQEIG-TLQKLQYLNLSNNQLRTLPQEIGTLQELEWLNLEHNQLAALPQEIDQLQN 338

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           LE LN+S N   L+TLP  I  L  L  L + +  +TTLP+ IG L+KLQ+L L  N L 
Sbjct: 339 LEDLNLSNN--RLKTLPKGIWKLQRLEWLYLEHAHLTTLPNEIGTLQKLQRLFLSNNRLK 396

Query: 189 SPPMDV 194
           + P ++
Sbjct: 397 TLPKEI 402



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 102/179 (56%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L + +NQL  LP  IG L KL+ LD+S N L +LP  I    SL+ L+   N+L+ LP  
Sbjct: 135 LSLENNQLTVLPQEIGKLQKLEKLDLSDNQLATLPNEIGQLESLQYLSLVNNRLKTLPKE 194

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           I ++L  LK L +  N+   LP+ +  L +L  LD   N L +LP ++  L NL+ L + 
Sbjct: 195 I-WKLQKLKRLYLGDNQFRTLPKEIDQLQNLEDLDVSNNQLVTLPNEIWKLQNLKWLYLD 253

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L  LP  IG L +L  L +S N++TTLP  IG L+KLQ L+L  N L + P ++
Sbjct: 254 DN--QLTVLPQEIGQLENLDSLILSNNQLTTLPQEIGTLQKLQYLNLSNNQLRTLPQEI 310



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/180 (37%), Positives = 107/180 (59%), Gaps = 3/180 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L++ +NQL+ LP  IG L +L+ L++  N L +LP+ I+  ++LE+LN + N+L+ LP  
Sbjct: 296 LNLSNNQLRTLPQEIGTLQELEWLNLEHNQLAALPQEIDQLQNLEDLNLSNNRLKTLPKG 355

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           I ++L  L+ L +    +  LP  +  L  L+ L    N LK+LP+++  L  LE L + 
Sbjct: 356 I-WKLQRLEWLYLEHAHLTTLPNEIGTLQKLQRLFLSNNRLKTLPKEIWKLRKLEWLYLK 414

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            N   L +LP  I  L +L  LD+S N++ TLP+ IG L+ L+ L L GNP  + P ++V
Sbjct: 415 NN--KLGSLPKEIDQLQNLEYLDLSNNQLRTLPNEIGQLQSLEDLDLSGNPFTTFPQEIV 472



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/186 (39%), Positives = 103/186 (55%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L +  NQL  LP  IG L  L  L +S N L +LP+ I   + L+ LN + N+
Sbjct: 243 KLQNLKWLYLDDNQLTVLPQEIGQLENLDSLILSNNQLTTLPQEIGTLQKLQYLNLSNNQ 302

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           LR LP  IG  L  L+ L++  N++  LPQ +  L +L  L+   N LK+LP+ +  L  
Sbjct: 303 LRTLPQEIG-TLQELEWLNLEHNQLAALPQEIDQLQNLEDLNLSNNRLKTLPKGIWKLQR 361

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           LE L +     +L TLP  IG L  L  L +S N++ TLP  I  LRKL+ L L+ N L 
Sbjct: 362 LEWLYLEH--AHLTTLPNEIGTLQKLQRLFLSNNRLKTLPKEIWKLRKLEWLYLKNNKLG 419

Query: 189 SPPMDV 194
           S P ++
Sbjct: 420 SLPKEI 425



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/175 (37%), Positives = 100/175 (57%), Gaps = 3/175 (1%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
            NQ + LP  I  L  L+ LDVS N L +LP  I   ++L+ L  + N+L  LP  IG +
Sbjct: 208 DNQFRTLPKEIDQLQNLEDLDVSNNQLVTLPNEIWKLQNLKWLYLDDNQLTVLPQEIG-Q 266

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL +L ++ N++  LPQ +  L  L+ L+   N L++LP+++  L  LE LN+  N  
Sbjct: 267 LENLDSLILSNNQLTTLPQEIGTLQKLQYLNLSNNQLRTLPQEIGTLQELEWLNLEHN-- 324

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L  LP  I  L +L +L++S N++ TLP  I  L++L+ L LE   L + P ++
Sbjct: 325 QLAALPQEIDQLQNLEDLNLSNNRLKTLPKGIWKLQRLEWLYLEHAHLTTLPNEI 379



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 100/187 (53%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++ +NQL  L   IG L KL+ L +  N LESLP  I   R LE LN   N
Sbjct: 58  GKLENLEKLNLVNNQLAVLVQEIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLENN 117

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  L   IG  L  L+ LS+  N++ +LPQ +  L  L  LD   N L +LP ++  L 
Sbjct: 118 QLAVLVQEIG-TLQKLEWLSLENNQLTVLPQEIGKLQKLEKLDLSDNQLATLPNEIGQLE 176

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L++  N   L+TLP  I  L  L  L +  N+  TLP  I  L+ L+ L +  N L
Sbjct: 177 SLQYLSLVNN--RLKTLPKEIWKLQKLKRLYLGDNQFRTLPKEIDQLQNLEDLDVSNNQL 234

Query: 188 VSPPMDV 194
           V+ P ++
Sbjct: 235 VTLPNEI 241



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 101/184 (54%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           +NV +LD+  N L  LPN IG L  L+ L++  N L  L + I   + LE L+   N+L 
Sbjct: 38  MNVRILDLSDNLLITLPNEIGKLENLEKLNLVNNQLAVLVQEIGTLQKLEWLSLKNNRLE 97

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ IG +L  L+ L++  N++ +L Q +  L  L  L    N L  LP+++  L  LE
Sbjct: 98  SLPNKIG-KLRKLEHLNLENNQLAVLVQEIGTLQKLEWLSLENNQLTVLPQEIGKLQKLE 156

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++S N   L TLP  IG L SL  L +  N++ TLP  I  L+KL++L L  N   + 
Sbjct: 157 KLDLSDN--QLATLPNEIGQLESLQYLSLVNNRLKTLPKEIWKLQKLKRLYLGDNQFRTL 214

Query: 191 PMDV 194
           P ++
Sbjct: 215 PKEI 218



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
           +L +  ++R+LD   N L +LP ++  L NLE LN+  N   L  L   IG L  L  L 
Sbjct: 33  ALKNPMNVRILDLSDNLLITLPNEIGKLENLEKLNLVNN--QLAVLVQEIGTLQKLEWLS 90

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           +  N++ +LP+ IG LRKL+ L+LE N L 
Sbjct: 91  LKNNRLESLPNKIGKLRKLEHLNLENNQLA 120



 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 21/45 (46%), Positives = 30/45 (66%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTI 53
           +L N+  LD+ +NQL+ LPN IG L  L+ LD+SGN   + P+ I
Sbjct: 427 QLQNLEYLDLSNNQLRTLPNEIGQLQSLEDLDLSGNPFTTFPQEI 471


>gi|418668202|ref|ZP_13229605.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756059|gb|EKR17686.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 378

 Score =  100 bits (249), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 107/184 (58%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL +   +LK LP  IG L  L++LD+S N L  LPK I   ++L+EL  N+N+L 
Sbjct: 47  LDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLT 106

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
             P  I  +L +L  L ++ N++ ILP  +  L +L+ L+   N LK++ +++E L NL+
Sbjct: 107 TFPKEIE-QLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQ 165

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +  N   L   P  IG L +L  L +S N++TT P  IG L+ LQ+L L  N L + 
Sbjct: 166 KLYLDNN--QLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTF 223

Query: 191 PMDV 194
           P ++
Sbjct: 224 PKEI 227



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 112/194 (57%), Gaps = 4/194 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++PE +  +L N+ +LD+  NQL  LP  I  L  L+ L ++ N L + PK IE  +SL 
Sbjct: 61  VLPEKI-GQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLH 119

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N+L  LP  IG +L NL+ L++  N++  + + +  L +L+ L    N L + P
Sbjct: 120 KLYLSNNQLTILPVEIG-QLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFP 178

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++  L NL+ L +S N   L T P  IG L +L EL +S N++TT P  IG L+KLQ L
Sbjct: 179 KEIGKLQNLKSLFLSNN--QLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWL 236

Query: 181 SLEGNPLVSPPMDV 194
            L  N L + P ++
Sbjct: 237 GLGDNQLTTIPNEI 250



 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 105/186 (56%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L + +NQL   P  IG L  LK L +S N L + PK I   ++L+EL  + N+
Sbjct: 160 QLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQ 219

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L   P  IG +L  L+ L +  N++  +P  +  L  L+ L+  +N L ++P+++  L N
Sbjct: 220 LTTFPKEIG-KLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQN 278

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+VL +S N    +T+P   G L +L  L +  N++T LP  IG L+ L+ L+L+ N L 
Sbjct: 279 LQVLFLSYN--QFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLT 336

Query: 189 SPPMDV 194
           + P ++
Sbjct: 337 TIPKEI 342



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 101/180 (56%), Gaps = 3/180 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + +NQL   P  IG L  L+ L +S N L + PK I   + L+ L    N
Sbjct: 182 GKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDN 241

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P+ IG +L  L+ L+++ N++  +P+ +  L +L+VL    N  K++P +   L 
Sbjct: 242 QLTTIPNEIG-KLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLK 300

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL++L++  N   L  LP  IG L +L  L++  N++TT+P  IG L+ LQ L L  N L
Sbjct: 301 NLKMLSLDAN--QLTALPKEIGKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQL 358



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 89/158 (56%), Gaps = 3/158 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + +NQL   P  IG L KL+ L +  N L ++P  I   + L+ELN + N
Sbjct: 205 GKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVN 264

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  IG +L NL+ L ++ N+   +P     L +L++L    N L +LP+++  L 
Sbjct: 265 QLTTIPKEIG-QLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLK 323

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
           NL++LN+  N   L T+P  IG L +L  L +  N+++
Sbjct: 324 NLKMLNLDAN--QLTTIPKEIGQLQNLQTLYLRNNQLS 359



 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 2/94 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L N+ VL +  NQ K +P   G L  LK+L +  N L +LPK I   ++L+ 
Sbjct: 269 IPKEI-GQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKM 327

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           LN + N+L  +P  IG +L NL+TL +  N++ I
Sbjct: 328 LNLDANQLTTIPKEIG-QLQNLQTLYLRNNQLSI 360


>gi|348586778|ref|XP_003479145.1| PREDICTED: leucine-rich repeat-containing protein 7-like [Cavia
           porcellus]
          Length = 1557

 Score =  100 bits (249), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 109/186 (58%), Gaps = 4/186 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP SIG L  L  LD+S N +E++   I  C +LE+
Sbjct: 221 LPEVLD-QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALED 279

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+QLPD+IG  L  L TL ++ N++ +LP ++ +L+ L   D   N L+SLP 
Sbjct: 280 LLLSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPS 338

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L + +NF  L  LP  IG   ++  + +  NK+  LP+ IG ++KL+ L+
Sbjct: 339 TIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLN 396

Query: 182 LEGNPL 187
           L  N L
Sbjct: 397 LSDNRL 402



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 108/233 (46%), Gaps = 50/233 (21%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  LK LD+S N ++  P+ I+ C+ L 
Sbjct: 81  EELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLT 140

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   L  LR+L+ R N LK+L
Sbjct: 141 IIEASVNPISKLPD--GFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTL 198

Query: 120 PEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELD 158
           P+ +  L  LE L++  N                        L+ LP SIG L  LV LD
Sbjct: 199 PKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD 258

Query: 159 VSYNKITT-----------------------LPDSIGCLRKLQKLSLEGNPLV 188
           +S N+I T                       LPDSIG L+KL  L ++ N L 
Sbjct: 259 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLT 311



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP+SIG L KL  L V  N L  LP TI N   LEE + + N+L  LP TIG+ 
Sbjct: 284 SNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGY- 342

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+TL+++ N +  LP+ +    ++ V+  R N L+ LPE++  +  L VLN+S N  
Sbjct: 343 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDN-- 400

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+ LP+S   L  L  L +S N+   L
Sbjct: 401 RLKNLPFSFTKLKELAALWLSDNQSKAL 428



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 69  LRQLP-DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P +   FE   L+ L ++ N+I  LP+ L +  +LR L    N L SLP  + +L+
Sbjct: 56  LQQVPKEVFNFERT-LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLV 114

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           NL+ L+IS+N   ++  P +I     L  ++ S N I+ LPD    L  L +L L
Sbjct: 115 NLKELDISKNG--VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYL 167



 Score = 41.6 bits (96), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 38/61 (62%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP  IG + KL+VL++S N L++LP +    + L  L  + N+ + 
Sbjct: 368 NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKA 427

Query: 72  L 72
           L
Sbjct: 428 L 428


>gi|402912243|ref|XP_003918687.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1,
           partial [Papio anubis]
          Length = 1076

 Score =  100 bits (249), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 120/250 (48%), Gaps = 44/250 (17%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P  L A L ++  LDV  N+L  LP+S+ CLS+L+ LDV  N L + P+ +    +LEE
Sbjct: 174 LPAQLGA-LAHLEELDVSFNRLTHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEE 232

Query: 62  LNANFNKLRQLPDTI---------------------GF-ELINLKTLSINCNKIVILPQS 99
           L+ + N+LR LP+ I                     GF EL +L++L ++ N +  LP  
Sbjct: 233 LDVSSNRLRGLPEDISALCALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQ 292

Query: 100 LTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNF--------------------- 138
            + L  L++L+   N L+  P  L  L  LE L +S+N                      
Sbjct: 293 FSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDN 352

Query: 139 QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQG 198
             +  LP SI  L  L EL +  N+I  LPD+ G L ++    ++ NPL+ PP +V  +G
Sbjct: 353 NRIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKG 412

Query: 199 LSAVKGYLSE 208
           +  +  Y  E
Sbjct: 413 IPYIAAYQKE 422



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 92/171 (53%), Gaps = 4/171 (2%)

Query: 16  LDVHSNQLKCL-PNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           LDV  N+L  L    +  L +L+ L++S N L +LP  +     LEEL+ +FN+L  LPD
Sbjct: 140 LDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLTHLPD 199

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
           ++   L  L+TL ++ N++   P+ L  L +L  LD   N L+ LPED+  L  L++L +
Sbjct: 200 SLSC-LSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALCALKILWL 258

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           S     L TLP     L SL  L +  N +  LP     L++L+ L+L  N
Sbjct: 259 SG--AELGTLPAGFCELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSN 307



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 80/146 (54%), Gaps = 8/146 (5%)

Query: 55  NCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLT----HLTSLRVLD 110
           N   +E LN   N L ++P+ +G  L +L+ L +  N+   LP ++     HLT L V  
Sbjct: 85  NLGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSH 144

Query: 111 ARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDS 170
            RL  L +  E +  L  L  LN+S N   L  LP  +G L  L ELDVS+N++T LPDS
Sbjct: 145 NRLTALGA--EVVSALRELRKLNLSHN--QLPALPAQLGALAHLEELDVSFNRLTHLPDS 200

Query: 171 IGCLRKLQKLSLEGNPLVSPPMDVVE 196
           + CL +L+ L ++ N L + P  +++
Sbjct: 201 LSCLSRLRTLDVDHNQLTAFPRQLLQ 226


>gi|298250400|ref|ZP_06974204.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
 gi|297548404|gb|EFH82271.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
          Length = 384

 Score =  100 bits (249), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 68/175 (38%), Positives = 100/175 (57%), Gaps = 3/175 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           + ESL A L  +  L++  NQL  LP S+GCL+ LK L +  N L +LP+ + N  +L E
Sbjct: 206 LSESLFAHLTQLAYLNITDNQLTELPRSLGCLTNLKELRIYNNQLATLPEELGNLAALRE 265

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+A  N+L  LPD++G +L  L+ L +  N++  LP  L  L +L  LD R N L SLP 
Sbjct: 266 LHAMNNRLETLPDSLG-KLKQLRELRLANNRLARLPTYLGELANLTSLDLRNNLLASLPA 324

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
            L+NL  L  L++  N   L TLP  +  L  L +LD+ + K++ LP  +  L +
Sbjct: 325 SLDNLAKLRALDLRAN--RLTTLPPGLQRLQHLEKLDLRWLKLSPLPTWLDQLEQ 377



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/191 (38%), Positives = 105/191 (54%), Gaps = 5/191 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL  +    V  NQL  LP S+  L +L+ L+++ N L SL + I     L+ L+A  N
Sbjct: 118 GRLQGLRDFSVGKNQLTSLPESLWELGRLQALNLAENQLSSLSERIGQLTQLQMLDAGHN 177

Query: 68  KLRQLPDTIGFELINL-KTLSINCNKIVILPQSL-THLTSLRVLDARLNCLKSLPEDLEN 125
           +L  LP+++G +L NL   L ++ N++  L +SL  HLT L  L+   N L  LP  L  
Sbjct: 178 QLTTLPESLG-QLTNLTHYLYLSNNRLTTLSESLFAHLTQLAYLNITDNQLTELPRSLGC 236

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L NL+ L I  N   L TLP  +G L +L EL    N++ TLPDS+G L++L++L L  N
Sbjct: 237 LTNLKELRIYNN--QLATLPEELGNLAALRELHAMNNRLETLPDSLGKLKQLRELRLANN 294

Query: 186 PLVSPPMDVVE 196
            L   P  + E
Sbjct: 295 RLARLPTYLGE 305



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 59/163 (36%), Positives = 90/163 (55%), Gaps = 3/163 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           VLD+  N+L  LP  +G L +L+ L +  N + +LP  +    +L  L+ + N+L  LP 
Sbjct: 33  VLDLTGNRLTALPEELGSLEQLQELYLDDNQITTLPHVLGKLVNLRALHVDMNRLSVLPS 92

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
           ++ + L  L+TL +  N++  LP  +  L  LR      N L SLPE L  L  L+ LN+
Sbjct: 93  SL-YHLPRLETLRLYKNRLTNLPADIGRLQGLRDFSVGKNQLTSLPESLWELGRLQALNL 151

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
           ++N   L +L   IG L  L  LD  +N++TTLP+S+G L  L
Sbjct: 152 AEN--QLSSLSERIGQLTQLQMLDAGHNQLTTLPESLGQLTNL 192



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 106/194 (54%), Gaps = 4/194 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PESL   L  +  L++  NQL  L   IG L++L++LD   N L +LP+++    +L  
Sbjct: 136 LPESL-WELGRLQALNLAENQLSSLSERIGQLTQLQMLDAGHNQLTTLPESLGQLTNLTH 194

Query: 62  -LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L  + N+L  L +++   L  L  L+I  N++  LP+SL  LT+L+ L    N L +LP
Sbjct: 195 YLYLSNNRLTTLSESLFAHLTQLAYLNITDNQLTELPRSLGCLTNLKELRIYNNQLATLP 254

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E+L NL  L  L+   N   LETLP S+G L  L EL ++ N++  LP  +G L  L  L
Sbjct: 255 EELGNLAALRELHAMNN--RLETLPDSLGKLKQLRELRLANNRLARLPTYLGELANLTSL 312

Query: 181 SLEGNPLVSPPMDV 194
            L  N L S P  +
Sbjct: 313 DLRNNLLASLPASL 326



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 108/189 (57%), Gaps = 5/189 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L+N+  L V  N+L  LP+S+  L +L+ L +  N L +LP  I   + L + +   N
Sbjct: 72  GKLVNLRALHVDMNRLSVLPSSLYHLPRLETLRLYKNRLTNLPADIGRLQGLRDFSVGKN 131

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+++ +EL  L+ L++  N++  L + +  LT L++LDA  N L +LPE L  L 
Sbjct: 132 QLTSLPESL-WELGRLQALNLAENQLSSLSERIGQLTQLQMLDAGHNQLTTLPESLGQLT 190

Query: 128 NL-EVLNISQNFQYLETLPYSI-GLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL   L +S N   L TL  S+   L  L  L+++ N++T LP S+GCL  L++L +  N
Sbjct: 191 NLTHYLYLSNN--RLTTLSESLFAHLTQLAYLNITDNQLTELPRSLGCLTNLKELRIYNN 248

Query: 186 PLVSPPMDV 194
            L + P ++
Sbjct: 249 QLATLPEEL 257



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 102/186 (54%), Gaps = 5/186 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKL-KVLDVSGNLLESLPKTI-ENCRSLEELNAN 65
            +L  + +LD   NQL  LP S+G L+ L   L +S N L +L +++  +   L  LN  
Sbjct: 164 GQLTQLQMLDAGHNQLTTLPESLGQLTNLTHYLYLSNNRLTTLSESLFAHLTQLAYLNIT 223

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
            N+L +LP ++G  L NLK L I  N++  LP+ L +L +LR L A  N L++LP+ L  
Sbjct: 224 DNQLTELPRSLGC-LTNLKELRIYNNQLATLPEELGNLAALRELHAMNNRLETLPDSLGK 282

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L  L  L ++ N   L  LP  +G L +L  LD+  N + +LP S+  L KL+ L L  N
Sbjct: 283 LKQLRELRLANN--RLARLPTYLGELANLTSLDLRNNLLASLPASLDNLAKLRALDLRAN 340

Query: 186 PLVSPP 191
            L + P
Sbjct: 341 RLTTLP 346



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 2/115 (1%)

Query: 84  KTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLET 143
           + L +  N++  LP+ L  L  L+ L    N + +LP  L  L+NL  L++  N   L  
Sbjct: 32  RVLDLTGNRLTALPEELGSLEQLQELYLDDNQITTLPHVLGKLVNLRALHVDMN--RLSV 89

Query: 144 LPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQG 198
           LP S+  L  L  L +  N++T LP  IG L+ L+  S+  N L S P  + E G
Sbjct: 90  LPSSLYHLPRLETLRLYKNRLTNLPADIGRLQGLRDFSVGKNQLTSLPESLWELG 144



 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 3/94 (3%)

Query: 107 RVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITT 166
           RVLD   N L +LPE+L +L  L+ L +  N   + TLP+ +G L++L  L V  N+++ 
Sbjct: 32  RVLDLTGNRLTALPEELGSLEQLQELYLDDN--QITTLPHVLGKLVNLRALHVDMNRLSV 89

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           LP S+  L +L+ L L  N L + P D+   QGL
Sbjct: 90  LPSSLYHLPRLETLRLYKNRLTNLPADIGRLQGL 123


>gi|402871709|ref|XP_003899796.1| PREDICTED: protein LAP2 isoform 3 [Papio anubis]
          Length = 1301

 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 106/187 (56%), Gaps = 10/187 (5%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L  + A+ N + +LPD 
Sbjct: 74  LSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPD- 132

Query: 76  IGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            GF +L+NL  L +N   +  LP +   LT L++L+ R N LK LP+ +  L  LE L++
Sbjct: 133 -GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDL 191

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N ++ E +P  +  L  L E  +  N++T +P  IG L++L  L +  N +     ++
Sbjct: 192 GSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EM 244

Query: 195 VEQGLSA 201
           VE+G+SA
Sbjct: 245 VEEGISA 251



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  ++  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNIRTFAADHNYLQQLPPEI 341



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 94/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+ E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 244 MVEEGISA-CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP +IG +L N++T + + N +  LP  +    ++ VL    N L++LP
Sbjct: 303 ELDCSFNEVEALPSSIG-QLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402


>gi|359683882|ref|ZP_09253883.1| hypothetical protein Lsan2_04024, partial [Leptospira santarosai
           str. 2000030832]
          Length = 225

 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 108/184 (58%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           ++V  LD+ +NQL   P  IG L  LK L ++ N L++LPK I   + L+ L  + N+L+
Sbjct: 38  MDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIGTLQKLKWLYLSENQLK 97

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  I   L  LK L ++ N++  LP+ +  L +L VLD   N L++LP ++  L +L+
Sbjct: 98  TLPKEIE-TLQKLKWLYLSENQLKTLPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLK 156

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++  N   L TLP  IG L  L EL+++ N++  LP  IG L+ LQ LS+  N L++ 
Sbjct: 157 RLHLEHN--QLITLPQEIGTLQDLEELNLANNQLRILPKEIGTLQHLQDLSVFNNQLITL 214

Query: 191 PMDV 194
           P ++
Sbjct: 215 PQEI 218



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 99/169 (58%), Gaps = 3/169 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+  L + +NQLK LP  IG L KLK L +S N L++LPK IE  + L+ L  + N+L
Sbjct: 60  LQNLKYLSLANNQLKTLPKEIGTLQKLKWLYLSENQLKTLPKEIETLQKLKWLYLSENQL 119

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           + LP  IG  L NL+ L +  N++  LP  +  L SL+ L    N L +LP+++  L +L
Sbjct: 120 KTLPKEIG-TLQNLEVLDLYKNQLRTLPSEIGKLRSLKRLHLEHNQLITLPQEIGTLQDL 178

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQ 178
           E LN++ N   L  LP  IG L  L +L V  N++ TLP  IG L+ L+
Sbjct: 179 EELNLANN--QLRILPKEIGTLQHLQDLSVFNNQLITLPQEIGKLQNLK 225


>gi|418712094|ref|ZP_13272839.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791361|gb|EKR85037.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|455791555|gb|EMF43362.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 238

 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 69/194 (35%), Positives = 109/194 (56%), Gaps = 3/194 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V +L++   +LK  P  IG L  L+ L +S N   +LPK IE  ++L+ L+   N+L+
Sbjct: 48  LGVRILNLSRQKLKTFPKEIGQLKNLQELHLSSNQFTTLPKEIEQLQNLKSLDLWDNQLK 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG +L NL+ ++++ N++  LP  +  L +L  L    N L  LP+++  L NLE
Sbjct: 108 TLPKEIG-QLQNLQKMNLDKNRLNTLPNEIGQLQNLESLYLNYNQLTILPKEIGQLQNLE 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +  N+  L  LP  IG L +L  L + YN++TTLP  IG L+ L++L L+ N   S 
Sbjct: 167 SLYL--NYNQLTMLPQEIGQLQNLEGLYLKYNQLTTLPKEIGRLQNLKRLYLKYNQFSSK 224

Query: 191 PMDVVEQGLSAVKG 204
             + +++ L    G
Sbjct: 225 EKEKIQKLLPKYPG 238



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/130 (38%), Positives = 78/130 (60%), Gaps = 1/130 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQLK LP  IG L  L+ +++  N L +LP  I   ++LE L  N+N
Sbjct: 91  EQLQNLKSLDLWDNQLKTLPKEIGQLQNLQKMNLDKNRLNTLPNEIGQLQNLESLYLNYN 150

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL++L +N N++ +LPQ +  L +L  L  + N L +LP+++  L 
Sbjct: 151 QLTILPKEIG-QLQNLESLYLNYNQLTMLPQEIGQLQNLEGLYLKYNQLTTLPKEIGRLQ 209

Query: 128 NLEVLNISQN 137
           NL+ L +  N
Sbjct: 210 NLKRLYLKYN 219



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R+L+     LK+ P+++  L NL+ L++S N     TLP  I  L +L 
Sbjct: 40  LTKALQNPLGVRILNLSRQKLKTFPKEIGQLKNLQELHLSSN--QFTTLPKEIEQLQNLK 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LD+  N++ TLP  IG L+ LQK++L+ N L + P ++
Sbjct: 98  SLDLWDNQLKTLPKEIGQLQNLQKMNLDKNRLNTLPNEI 136


>gi|421130600|ref|ZP_15590794.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410358299|gb|EKP05480.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 258

 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 105/184 (57%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           ++V  LD+  NQL  LP  I  L  L+ LD+  N L +LPK IE  + L+ L+ N N+L 
Sbjct: 37  MDVRTLDLSKNQLTTLPKEIEYLKDLESLDLRNNQLTTLPKEIEYLKKLQVLDLNDNQLT 96

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            +P  IG+ L  L+ L +  N++  LP+ + +L  L+ L    N L +LP+++  L  L+
Sbjct: 97  TIPKEIGY-LKKLQELYLINNQLTTLPKEIGYLKKLQELYLINNQLTTLPKEIGYLKKLQ 155

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +  N   L TLP  IG L  L  LD+  N++TTLP  IG L+KL+KL L+ N   + 
Sbjct: 156 ELYLINN--QLTTLPKEIGYLEELWLLDLRKNQLTTLPKEIGKLQKLEKLYLKNNQFTTF 213

Query: 191 PMDV 194
           P ++
Sbjct: 214 PKEI 217



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 106/193 (54%), Gaps = 3/193 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+ +NQL  LP  I  L KL+VLD++ N L ++PK I   + L+EL    N+L  LP  
Sbjct: 65  LDLRNNQLTTLPKEIEYLKKLQVLDLNDNQLTTIPKEIGYLKKLQELYLINNQLTTLPKE 124

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG+ L  L+ L +  N++  LP+ + +L  L+ L    N L +LP+++  L  L +L++ 
Sbjct: 125 IGY-LKKLQELYLINNQLTTLPKEIGYLKKLQELYLINNQLTTLPKEIGYLEELWLLDLR 183

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
           +N   L TLP  IG L  L +L +  N+ TT P  IG L+KL  L+L+  P +      +
Sbjct: 184 KN--QLTTLPKEIGKLQKLEKLYLKNNQFTTFPKEIGKLQKLNTLNLDDIPALKSQEKKI 241

Query: 196 EQGLSAVKGYLSE 208
           ++ L     Y  E
Sbjct: 242 QKLLPKASIYFIE 254


>gi|402871711|ref|XP_003899797.1| PREDICTED: protein LAP2 isoform 4 [Papio anubis]
          Length = 1345

 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 111/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 VVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+SA
Sbjct: 235 LDVSKNNI-----EMVEEGISA 251



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  ++  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNIRTFAADHNYLQQLPPEI 341



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 94/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+ E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 244 MVEEGISA-CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP +IG +L N++T + + N +  LP  +    ++ VL    N L++LP
Sbjct: 303 ELDCSFNEVEALPSSIG-QLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402


>gi|20091139|ref|NP_617214.1| hypothetical protein MA2301 [Methanosarcina acetivorans C2A]
 gi|19916243|gb|AAM05694.1| hypothetical protein MA_2301 [Methanosarcina acetivorans C2A]
          Length = 631

 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/211 (36%), Positives = 113/211 (53%), Gaps = 3/211 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+ +L+V+ NQL  L   I  L  L  LD+S N L  LP  I    +L+ L ++ N
Sbjct: 82  GELKNLTILNVYRNQLIQLLPEITELKNLTTLDLSLNKLTQLPPEIGELNNLKTLYSSSN 141

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L QLP  I  +L NL  L ++ N ++ LP  +T L +L  L+   N L  LP  +  L 
Sbjct: 142 QLTQLPLEIT-KLKNLTELYLSSNLMIRLPLEITELKNLTTLNVYRNQLIQLPSKITELK 200

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++S+N   L  LP  I  L +L  LD+S N++  LP  I  L+ L  L L  NPL
Sbjct: 201 NLKKLDLSRN--QLAQLPPEIAELKNLTTLDLSRNQLAQLPPEIAELKNLTTLDLFENPL 258

Query: 188 VSPPMDVVEQGLSAVKGYLSEKMNNDHKSPK 218
           +S P ++V QG+ A+  YL +    ++   K
Sbjct: 259 ISLPPEIVSQGVKAIFTYLKQSKTTENNEAK 289



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/185 (38%), Positives = 98/185 (52%), Gaps = 3/185 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  LD+  NQL  LP+ I  L  L  L++SGN L  LP  I   +SL   + + N+L Q
Sbjct: 17  NLTTLDLSENQLTQLPSEITELKNLTTLNLSGNQLTQLPSEIGELKSLTSFDLSVNQLTQ 76

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG EL NL  L++  N+++ L   +T L +L  LD  LN L  LP ++  L NL+ 
Sbjct: 77  LPPEIG-ELKNLTILNVYRNQLIQLLPEITELKNLTTLDLSLNKLTQLPPEIGELNNLKT 135

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L  S N   L  LP  I  L +L EL +S N +  LP  I  L+ L  L++  N L+  P
Sbjct: 136 LYSSSN--QLTQLPLEITKLKNLTELYLSSNLMIRLPLEITELKNLTTLNVYRNQLIQLP 193

Query: 192 MDVVE 196
             + E
Sbjct: 194 SKITE 198



 Score = 37.4 bits (85), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 37/75 (49%), Gaps = 1/75 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P  +T  L N+  LD+  NQL  LP  I  L  L  LD+S N L  LP  I   ++L  
Sbjct: 192 LPSKIT-ELKNLKKLDLSRNQLAQLPPEIAELKNLTTLDLSRNQLAQLPPEIAELKNLTT 250

Query: 62  LNANFNKLRQLPDTI 76
           L+   N L  LP  I
Sbjct: 251 LDLFENPLISLPPEI 265


>gi|395825406|ref|XP_003785926.1| PREDICTED: protein LAP2 isoform 3 [Otolemur garnettii]
          Length = 1303

 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 106/183 (57%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  L
Sbjct: 217 NRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIG-SL 275

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  LTS+  LD   N +++LP  +  L N+       N  Y
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTFAADHN--Y 333

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+  LP+ +G ++KL+ ++L  N L + P    + Q L
Sbjct: 334 LQQLPPEIGSWKNITVLFLHSNKLEILPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQL 393

Query: 200 SAV 202
           +A+
Sbjct: 394 TAM 396



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 106/187 (56%), Gaps = 10/187 (5%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L  + A+ N + +LPD 
Sbjct: 74  LSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPD- 132

Query: 76  IGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            GF +L+NL  L +N   +  LP +   LT L++L+ R N LK LP+ +  L  LE L++
Sbjct: 133 -GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDL 191

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N ++ E +P  +  L  L E  +  N++T +P  IG L++L  L +  N +     ++
Sbjct: 192 GSN-EFTE-VPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNI-----EM 244

Query: 195 VEQGLSA 201
           +E+G+SA
Sbjct: 245 IEEGISA 251



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLTSIEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP S+G L  ++  + + N L   P ++
Sbjct: 312 EALPSSVGQLTNIRTFAADHNYLQQLPPEI 341



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 93/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           MI E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 244 MIEEGISA-CENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLTSIE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP ++G +L N++T + + N +  LP  +    ++ VL    N L+ LP
Sbjct: 303 ELDCSFNEVEALPSSVG-QLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLEILP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402


>gi|359461194|ref|ZP_09249757.1| Miro domain-containing protein [Acaryochloris sp. CCMEE 5410]
          Length = 448

 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 72/189 (38%), Positives = 104/189 (55%), Gaps = 3/189 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L +V ++ +  N L+ LP  IG L +LK L++SG  L  LP  I    +L+ LN   N
Sbjct: 103 GQLRHVQIIYLVGNSLQTLPPEIGQLKQLKTLNLSGGNLNRLPPEIGQLSNLQSLNLYKN 162

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +LR LP  IG +L  L+ L I  N++  LP  +  L +L+ L    N LK+LP ++  L 
Sbjct: 163 QLRTLPPEIG-QLKQLQRLDIRNNRLSALPPEIGGLQNLKRLTLHHNQLKTLPPEIGELK 221

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +  ++  L  LP  IG L +LV L + YNK+  LP SIG L  LQ L L  N L
Sbjct: 222 NLQKLAV--DYNQLHRLPVEIGQLENLVSLGLPYNKLKHLPVSIGQLNNLQVLGLNFNQL 279

Query: 188 VSPPMDVVE 196
              P ++ +
Sbjct: 280 THLPPEISQ 288



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 66/182 (36%), Positives = 99/182 (54%), Gaps = 3/182 (1%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
              LD+    L  LP  IG L  ++++ + GN L++LP  I   + L+ LN +   L +L
Sbjct: 85  ATTLDLQGLGLAELPPDIGQLRHVQIIYLVGNSLQTLPPEIGQLKQLKTLNLSGGNLNRL 144

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P  IG +L NL++L++  N++  LP  +  L  L+ LD R N L +LP ++  L NL+ L
Sbjct: 145 PPEIG-QLSNLQSLNLYKNQLRTLPPEIGQLKQLQRLDIRNNRLSALPPEIGGLQNLKRL 203

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
            +  N   L+TLP  IG L +L +L V YN++  LP  IG L  L  L L  N L   P+
Sbjct: 204 TLHHN--QLKTLPPEIGELKNLQKLAVDYNQLHRLPVEIGQLENLVSLGLPYNKLKHLPV 261

Query: 193 DV 194
            +
Sbjct: 262 SI 263



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 98/179 (54%), Gaps = 3/179 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L+++ NQL+ LP  IG L +L+ LD+  N L +LP  I   ++L+ L  + N
Sbjct: 149 GQLSNLQSLNLYKNQLRTLPPEIGQLKQLQRLDIRNNRLSALPPEIGGLQNLKRLTLHHN 208

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG EL NL+ L+++ N++  LP  +  L +L  L    N LK LP  +  L 
Sbjct: 209 QLKTLPPEIG-ELKNLQKLAVDYNQLHRLPVEIGQLENLVSLGLPYNKLKHLPVSIGQLN 267

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           NL+VL +  NF  L  LP  I  L  L  L ++ NK+   P  I  L  L+ L L  +P
Sbjct: 268 NLQVLGL--NFNQLTHLPPEISQLHRLEVLSLTSNKLQRFPTEIIHLTNLEVLHLGASP 324



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 112/211 (53%), Gaps = 27/211 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+V L +  N+LK LP SIG L+ L+VL ++ N L  LP  I     LE L+   N
Sbjct: 241 GQLENLVSLGLPYNKLKHLPVSIGQLNNLQVLGLNFNQLTHLPPEISQLHRLEVLSLTSN 300

Query: 68  KLRQLPDTIGFELINLKTLSINC---------------------NKIVILPQSLTHLTSL 106
           KL++ P  I   L NL+ L +                       N++  LP  +  LT L
Sbjct: 301 KLQRFPTEI-IHLTNLEVLHLGASPESLAFSVQFHLKEEYATTFNQVSSLPPEIGQLTQL 359

Query: 107 RVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITT 166
           + L+     L +LP ++  L+NL++L +S N   L ++P+ IG L +L  L++SYN++ +
Sbjct: 360 QDLNLGSCTLLNLPPEIGQLVNLQMLGLSNNG--LMSVPHEIGRLANLQGLELSYNQLKS 417

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQ 197
           LP  +  L +L+ L+L  NPL   P +V++Q
Sbjct: 418 LPPELKALTRLEYLNLSNNPL---PAEVMKQ 445



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/161 (34%), Positives = 90/161 (55%), Gaps = 3/161 (1%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           +K   LD+ G  L  LP  I   R ++ +    N L+ LP  IG +L  LKTL+++   +
Sbjct: 83  TKATTLDLQGLGLAELPPDIGQLRHVQIIYLVGNSLQTLPPEIG-QLKQLKTLNLSGGNL 141

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
             LP  +  L++L+ L+   N L++LP ++  L  L+ L+I  N   L  LP  IG L +
Sbjct: 142 NRLPPEIGQLSNLQSLNLYKNQLRTLPPEIGQLKQLQRLDIRNN--RLSALPPEIGGLQN 199

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L  L + +N++ TLP  IG L+ LQKL+++ N L   P+++
Sbjct: 200 LKRLTLHHNQLKTLPPEIGELKNLQKLAVDYNQLHRLPVEI 240


>gi|126305957|ref|XP_001379454.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Monodelphis domestica]
          Length = 598

 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 124/236 (52%), Gaps = 27/236 (11%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+PE LT +L N+ VL +  N+L C+P   G L KL+ LD+S N L ++P +  +   L 
Sbjct: 137 MLPEELT-KLRNLKVLFLQYNELTCVPEGFGGLDKLEDLDLSNNRLTTVPASFSSLSKLM 195

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +LN   N+++ LP  I   +  LK L    N +  +P  L ++ SL +L  R N L+ LP
Sbjct: 196 KLNLASNQMKNLPAEIT-RMKRLKHLDCTSNYLETIPSELANMESLELLYLRRNKLRFLP 254

Query: 121 E-----------------------DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVEL 157
           E                        L++L ++ VL++  N   L+++P  I LL +L  L
Sbjct: 255 EFPSCMLLKELHIGENQIEEITAGHLKHLKSVHVLDLRDN--KLKSIPDEITLLQALERL 312

Query: 158 DVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNND 213
           D++ N + +LP  +G L  L+ L+LEGNPL +   +++ +G   V  YL  K+ +D
Sbjct: 313 DLTNNDVRSLPHILGTLPHLKFLALEGNPLRTIRRELLNKGTQEVLKYLRSKIKDD 368



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 94/162 (58%), Gaps = 3/162 (1%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           + +LD+H NQL  LP +IG L  L+ L+VS N L+ LP+ +   R+L+ L   +N+L  +
Sbjct: 102 LTILDMHDNQLTSLPCAIGELENLQKLNVSHNKLKMLPEELTKLRNLKVLFLQYNELTCV 161

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P+  G  L  L+ L ++ N++  +P S + L+ L  L+   N +K+LP ++  +  L+ L
Sbjct: 162 PEGFG-GLDKLEDLDLSNNRLTTVPASFSSLSKLMKLNLASNQMKNLPAEITRMKRLKHL 220

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCL 174
           + + N  YLET+P  +  + SL  L +  NK+  LP+   C+
Sbjct: 221 DCTSN--YLETIPSELANMESLELLYLRRNKLRFLPEFPSCM 260



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 92/176 (52%), Gaps = 3/176 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           ++  L + +N+L+ L + +  L  L +LD+  N L SLP  I    +L++LN + NKL+ 
Sbjct: 78  DLTKLIISNNKLQSLSDDLRLLPALTILDMHDNQLTSLPCAIGELENLQKLNVSHNKLKM 137

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ +  +L NLK L +  N++  +P+    L  L  LD   N L ++P    +L  L  
Sbjct: 138 LPEELT-KLRNLKVLFLQYNELTCVPEGFGGLDKLEDLDLSNNRLTTVPASFSSLSKLMK 196

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           LN++ N   ++ LP  I  +  L  LD + N + T+P  +  +  L+ L L  N L
Sbjct: 197 LNLASN--QMKNLPAEITRMKRLKHLDCTSNYLETIPSELANMESLELLYLRRNKL 250



 Score = 70.9 bits (172), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 92/162 (56%), Gaps = 3/162 (1%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           + L  L +S N L+SL   +    +L  L+ + N+L  LP  IG EL NL+ L+++ NK+
Sbjct: 77  TDLTKLIISNNKLQSLSDDLRLLPALTILDMHDNQLTSLPCAIG-ELENLQKLNVSHNKL 135

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
            +LP+ LT L +L+VL  + N L  +PE    L  LE L++S N   L T+P S   L  
Sbjct: 136 KMLPEELTKLRNLKVLFLQYNELTCVPEGFGGLDKLEDLDLSNN--RLTTVPASFSSLSK 193

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
           L++L+++ N++  LP  I  +++L+ L    N L + P ++ 
Sbjct: 194 LMKLNLASNQMKNLPAEITRMKRLKHLDCTSNYLETIPSELA 235



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 25/204 (12%)

Query: 32  CLSKLKVLDVSGNLLESLPKTIENC---RSLEELNANFNKLRQLPDTIGFELINLKTLSI 88
            ++ LK+LD S      +P  + +     ++  +N   N L ++P  I      +  +++
Sbjct: 393 AMTTLKLLDYSDKKATLIPDEVFDAIGSNTITSINFTKNHLNEIPQRIVELKATVCDVNL 452

Query: 89  NCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN----------- 137
             NK+  +   L  L  L  LD R N L SLPE++E L  L+ +N+S N           
Sbjct: 453 GFNKLSCISAELCALHKLIHLDIRNNLLTSLPEEMEALSRLQTINLSFNRLQAFPCVLYR 512

Query: 138 FQYLETL-----------PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
            + LET+           P  +  +  L  LD+  N +  +P  +G    L+ L LEGNP
Sbjct: 513 LRTLETVLLGNNQLGSVDPLRLQQMDRLATLDLQNNDLLHVPPELGNCVSLRTLLLEGNP 572

Query: 187 LVSPPMDVVEQGLSAVKGYLSEKM 210
             +P   ++ +G  AV  YL  ++
Sbjct: 573 FRTPRAAILARGTDAVLEYLRGRI 596



 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 2/137 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +      V  +++  N+L C+   +  L KL  LD+  NLL SLP+ +E    L+ 
Sbjct: 436 IPQRIVELKATVCDVNLGFNKLSCISAELCALHKLIHLDIRNNLLTSLPEEMEALSRLQT 495

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKI-VILPQSLTHLTSLRVLDARLNCLKSLP 120
           +N +FN+L+  P  + + L  L+T+ +  N++  + P  L  +  L  LD + N L  +P
Sbjct: 496 INLSFNRLQAFP-CVLYRLRTLETVLLGNNQLGSVDPLRLQQMDRLATLDLQNNDLLHVP 554

Query: 121 EDLENLINLEVLNISQN 137
            +L N ++L  L +  N
Sbjct: 555 PELGNCVSLRTLLLEGN 571



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 69/131 (52%), Gaps = 9/131 (6%)

Query: 114 NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGC 173
           N L+SL +DL  L  L +L++  N   L +LP +IG L +L +L+VS+NK+  LP+ +  
Sbjct: 87  NKLQSLSDDLRLLPALTILDMHDN--QLTSLPCAIGELENLQKLNVSHNKLKMLPEELTK 144

Query: 174 LRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKS--PKKKSWVGKLVKYGT 231
           LR L+ L L+ N L   P     +G   +       ++N+  +  P   S + KL+K   
Sbjct: 145 LRNLKVLFLQYNELTCVP-----EGFGGLDKLEDLDLSNNRLTTVPASFSSLSKLMKLNL 199

Query: 232 FNGALRNHRSE 242
            +  ++N  +E
Sbjct: 200 ASNQMKNLPAE 210


>gi|432104584|gb|ELK31196.1| Protein LAP2 [Myotis davidii]
          Length = 1457

 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 106/183 (57%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  L
Sbjct: 217 NRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNALQQLPETIG-SL 275

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  Y
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNIRTFAADHN--Y 333

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q L
Sbjct: 334 LQQLPPEIGNWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQL 393

Query: 200 SAV 202
           +A+
Sbjct: 394 TAM 396



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 112/204 (54%), Gaps = 13/204 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSAVK 203
           L +  N +     +++E+G+SA +
Sbjct: 235 LDVSKNNI-----EMIEEGISACE 253



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNALQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLVSIEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  ++  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNIRTFAADHNYLQQLPPEI 341



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 95/163 (58%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           MI E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 244 MIEEGISA-CENLQDLLLSSNALQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP +IG +L N++T + + N +  LP  + +  ++ VL    N L++LP
Sbjct: 303 ELDCSFNEVEALPSSIG-QLTNIRTFAADHNYLQQLPPEIGNWKNITVLFLHSNKLETLP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402


>gi|417761949|ref|ZP_12409946.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417776878|ref|ZP_12424710.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418672964|ref|ZP_13234294.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409942211|gb|EKN87831.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410573374|gb|EKQ36424.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410580071|gb|EKQ47902.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 597

 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 106/184 (57%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++   +L  LP  IG L  L+ L++  NLL  LPK I    +L+EL+   N+L 
Sbjct: 50  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLA 109

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
             P  I  EL  L++L ++ N+++ILP  +  L +L+ L    N L + P+++  L NL+
Sbjct: 110 TFPAVI-VELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQ 168

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +S+N   L  LP  IG L +L  LD+  N+ T LP  IG L+ LQ L+L  N L + 
Sbjct: 169 KLWLSEN--RLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATL 226

Query: 191 PMDV 194
           P+++
Sbjct: 227 PVEI 230



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 102/183 (55%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L+++      LP  I  L  LK L +  N L+++P  I   ++LE LN   N+L +
Sbjct: 379 NLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELER 438

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ LS++ N + I P  +  L  L+ LD  +N   + P+++  L NL+ 
Sbjct: 439 LPKEIG-QLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQT 497

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LN+ +N   L  LP  I  L +L ELD++ N+ T LP  IG L+KLQ L L  N L + P
Sbjct: 498 LNLQRN--QLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP 555

Query: 192 MDV 194
            ++
Sbjct: 556 TEI 558



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/184 (38%), Positives = 102/184 (55%), Gaps = 3/184 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQL   P  I  L KL+ LD+S N L  LP  I   ++L++L    N
Sbjct: 93  GQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKN 152

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL   P  IG +L NL+ L ++ N++  LP+ +  L +L+ LD + N    LP+++  L 
Sbjct: 153 KLTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQ 211

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ LN+S N   L TLP  IG L +L EL +  N++T  P  IG L+ LQ L    N L
Sbjct: 212 NLQTLNLSDN--QLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRL 269

Query: 188 VSPP 191
            + P
Sbjct: 270 TALP 273



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 103/178 (57%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +RL N+  L +  N LK +P+ IG L  L+ L++  N LE LPK I   R+L++L+ + N
Sbjct: 398 SRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQN 457

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+  P  I  +L  L+ L ++ N+    P+ +  L +L+ L+ + N L +LP ++E L 
Sbjct: 458 TLKIFPAEIE-QLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLK 516

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ L+++ N      LP  IG L  L  LD+  N++TTLP  IG L+ LQ L L+ N
Sbjct: 517 NLQELDLNDN--QFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 572



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/197 (36%), Positives = 106/197 (53%), Gaps = 9/197 (4%)

Query: 4   ESLTA------RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCR 57
           E LTA      +L N+  L++  N L  LP  IG L  L+ LD+  N L + P  I   +
Sbjct: 60  EKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPAVIVELQ 119

Query: 58  SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK 117
            LE L+ + N+L  LP+ IG  L NL+ L +  NK+   P+ +  L +L+ L    N L 
Sbjct: 120 KLESLDLSENRLIILPNEIG-RLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLT 178

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
           +LP+++  L NL+ L++  N      LP  IG L +L  L++S N++ TLP  IG L+ L
Sbjct: 179 ALPKEIGQLKNLQTLDLQDN--QFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNL 236

Query: 178 QKLSLEGNPLVSPPMDV 194
           Q+L L  N L   P ++
Sbjct: 237 QELYLRNNRLTVFPKEI 253



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 97/178 (54%), Gaps = 8/178 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  N+L  LP  IG L  L+ LD+  N    LPK I   ++L+ LN + N
Sbjct: 162 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDN 221

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +  N++ + P+ +  L +L++L +  N L +LP+ +  L 
Sbjct: 222 QLATLPVEIG-QLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKKMGQLQ 280

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ LN+  N   L   P  IG L +L +L++  N     P S+   +++QKL  + N
Sbjct: 281 NLQTLNLVNN--RLTVFPKEIGQLQNLQDLELLMN-----PLSLKERKRIQKLFPDSN 331



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 103/238 (43%), Gaps = 53/238 (22%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L    N+L  LP  +G L  L+ L++  N L   PK I   ++L++L    N
Sbjct: 254 GQLQNLQMLCSPENRLTALPKKMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMN 313

Query: 68  KL---------RQLPDT------------------------IGFEL-INLKTLSINCNKI 93
            L         +  PD+                          FEL +  K  S +  K+
Sbjct: 314 PLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKV 373

Query: 94  VI-----------------LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQ 136
           ++                 LP+ ++ L +L+ L   LN LK++P ++  L NLE LN+  
Sbjct: 374 ILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEA 433

Query: 137 NFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           N   LE LP  IG L +L +L +  N +   P  I  L+KLQKL L  N   + P ++
Sbjct: 434 N--ELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEI 489



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L + L+N +++ VLN+S   + L  LP  IG L +L EL++ +N +T LP  IG L  
Sbjct: 40  RDLTKALQNPLDVRVLNLSG--EKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLEN 97

Query: 177 LQKLSLEGNPLVSPPMDVVE 196
           LQ+L L  N L + P  +VE
Sbjct: 98  LQELDLRDNQLATFPAVIVE 117



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +RVL+     L +LP+++  L NL+ LN+  N   L  LP  IG L +L 
Sbjct: 42  LTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNL--LTVLPKEIGQLENLQ 99

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           ELD+  N++ T P  I  L+KL+ L L  N L+  P ++
Sbjct: 100 ELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEI 138


>gi|124002029|ref|ZP_01686883.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123992495|gb|EAY31840.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 395

 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 109/180 (60%), Gaps = 3/180 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N  +L + +  LK +P  IG L KL++LD+  N +++LP  I + + L+ L+   +K+  
Sbjct: 51  NAYLLSLKNKGLKKVPKEIGKLKKLQMLDLGLNQIDTLPPCIGSLKFLQILDLWGDKIAY 110

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LPDTIG  L++LK L ++ NK+V LP+S+  LT L+V+D   N L  +P ++  L +L V
Sbjct: 111 LPDTIG-NLVHLKFLYMDYNKLVKLPKSIKKLTQLQVIDLEGNKLTRIPSEIGALKSLRV 169

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L++ +N   + T+P  +G L  L  LD+  N+I  +P +IG LR L+ L L  N + S P
Sbjct: 170 LDLEKNG--ISTIPSQLGNLSQLEVLDLDSNQIKQIPYAIGGLRSLKYLYLRNNLIDSLP 227



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 109/188 (57%), Gaps = 4/188 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L  + +LD+  NQ+  LP  IG L  L++LD+ G+ +  LP TI N   L+ 
Sbjct: 65  VPKEI-GKLKKLQMLDLGLNQIDTLPPCIGSLKFLQILDLWGDKIAYLPDTIGNLVHLKF 123

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  ++NKL +LP +I  +L  L+ + +  NK+  +P  +  L SLRVLD   N + ++P 
Sbjct: 124 LYMDYNKLVKLPKSIK-KLTQLQVIDLEGNKLTRIPSEIGALKSLRVLDLEKNGISTIPS 182

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L NL  LEVL++  N   ++ +PY+IG L SL  L +  N I +LPD +  + KL+ L 
Sbjct: 183 QLGNLSQLEVLDLDSN--QIKQIPYAIGGLRSLKYLYLRNNLIDSLPDELKNMVKLEHLY 240

Query: 182 LEGNPLVS 189
           +  N L S
Sbjct: 241 VSNNRLDS 248



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 112/204 (54%), Gaps = 6/204 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP  L   L  + VLD+ SNQ+K +P +IG L  LK L +  NL++SLP  ++N   LE 
Sbjct: 180 IPSQL-GNLSQLEVLDLDSNQIKQIPYAIGGLRSLKYLYLRNNLIDSLPDELKNMVKLEH 238

Query: 62  LNANFNKLRQLPDTIGF--ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
           L  + N+L        F  +L +LKTL ++ NK+V LPQ +  L +L+ L    N L++L
Sbjct: 239 LYVSNNRLDSSFAKSRFLGKLQSLKTLDLSKNKLVRLPQDIVQLKNLKTLILHNNQLQAL 298

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ L  + NLE L++  N   L  LP S+  L  L +L +  N++T LP+ I  ++ L++
Sbjct: 299 PDSLGEIENLEELDLRNN--QLTVLPKSVLQLAKLKKLILRNNQLTVLPEEIAQMKNLKE 356

Query: 180 LSLEGNPLVSPPMDVVEQGLSAVK 203
           L L GN   +P       G  A K
Sbjct: 357 LDLRGN-FTTPTESQSATGYDAEK 379



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 115/221 (52%), Gaps = 30/221 (13%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+S+  +L  + V+D+  N+L  +P+ IG L  L+VLD+  N + ++P  + N   LE 
Sbjct: 134 LPKSI-KKLTQLQVIDLEGNKLTRIPSEIGALKSLRVLDLEKNGISTIPSQLGNLSQLEV 192

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTH------------------- 102
           L+ + N+++Q+P  IG  L +LK L +  N I  LP  L +                   
Sbjct: 193 LDLDSNQIKQIPYAIG-GLRSLKYLYLRNNLIDSLPDELKNMVKLEHLYVSNNRLDSSFA 251

Query: 103 -------LTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
                  L SL+ LD   N L  LP+D+  L NL+ L +  N   L+ LP S+G + +L 
Sbjct: 252 KSRFLGKLQSLKTLDLSKNKLVRLPQDIVQLKNLKTLILHNN--QLQALPDSLGEIENLE 309

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           ELD+  N++T LP S+  L KL+KL L  N L   P ++ +
Sbjct: 310 ELDLRNNQLTVLPKSVLQLAKLKKLILRNNQLTVLPEEIAQ 350



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 76/144 (52%), Gaps = 4/144 (2%)

Query: 51  KTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD 110
           K  +   SL+EL     +L ++ D    +  N   LS+    +  +P+ +  L  L++LD
Sbjct: 22  KAQDTLLSLQELEQK--ELYKVIDDAVHDAANAYLLSLKNKGLKKVPKEIGKLKKLQMLD 79

Query: 111 ARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDS 170
             LN + +LP  + +L  L++L++  +   +  LP +IG L+ L  L + YNK+  LP S
Sbjct: 80  LGLNQIDTLPPCIGSLKFLQILDLWGD--KIAYLPDTIGNLVHLKFLYMDYNKLVKLPKS 137

Query: 171 IGCLRKLQKLSLEGNPLVSPPMDV 194
           I  L +LQ + LEGN L   P ++
Sbjct: 138 IKKLTQLQVIDLEGNKLTRIPSEI 161


>gi|395530455|ref|XP_003767310.1| PREDICTED: leucine-rich repeat-containing protein 7 [Sarcophilus
           harrisii]
          Length = 1442

 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 108/184 (58%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP SIG L  L  LD+S N +E++   I  C +LE+
Sbjct: 206 LPEVL-EQIQNLRELWMDNNALQTLPGSIGKLKMLVYLDMSKNRIETVDLEISGCEALED 264

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+QLPD+IG  L  L TL ++ N++ +LP ++ +L+ L   D   N L+SLP 
Sbjct: 265 LLLSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTVLPNAIGNLSLLEEFDCSCNELESLPS 323

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L + +NF  L  LP  IG   ++  + +  NK+  LP+ IG ++KL+ L+
Sbjct: 324 TIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLN 381

Query: 182 LEGN 185
           L  N
Sbjct: 382 LSDN 385



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 79/233 (33%), Positives = 109/233 (46%), Gaps = 50/233 (21%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP +I  L  LK LD+S N ++  P+ I+ C+ L 
Sbjct: 66  EELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLT 125

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +LINL  L +N   +  LP +   L  LR+L+ R N LK+L
Sbjct: 126 IIEASVNPISKLPD--GFTQLINLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTL 183

Query: 120 PEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELD 158
           P+ +  L  LE L++  N                        L+TLP SIG L  LV LD
Sbjct: 184 PKSMHKLAQLERLDLGNNEFSELPEVLEQIQNLRELWMDNNALQTLPGSIGKLKMLVYLD 243

Query: 159 VSYNKITT-----------------------LPDSIGCLRKLQKLSLEGNPLV 188
           +S N+I T                       LPDSIG L+KL  L ++ N L 
Sbjct: 244 MSKNRIETVDLEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLT 296



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/148 (39%), Positives = 85/148 (57%), Gaps = 3/148 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP+SIG L KL  L V  N L  LP  I N   LEE + + N+L  LP TIG+ 
Sbjct: 269 SNMLQQLPDSIGLLKKLTTLKVDDNQLTVLPNAIGNLSLLEEFDCSCNELESLPSTIGY- 327

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+TL+++ N +  LP+ +    ++ V+  R N L+ LPE++  +  L VLN+S N  
Sbjct: 328 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDN-- 385

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+ LP+S   L  L  L +S N+   L
Sbjct: 386 RLKNLPFSFTKLKELAALWLSDNQSKAL 413



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 69  LRQLP-DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P +   FE   L+ L ++ N+I  LP+ L +  +LR L    N L +LP  + +L+
Sbjct: 41  LQQVPKEVFNFERT-LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLV 99

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           NL+ L+IS+N   ++  P +I     L  ++ S N I+ LPD    L  L +L L
Sbjct: 100 NLKELDISKNG--VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLINLTQLYL 152



 Score = 41.6 bits (96), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 38/61 (62%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP  IG + KL+VL++S N L++LP +    + L  L  + N+ + 
Sbjct: 353 NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKA 412

Query: 72  L 72
           L
Sbjct: 413 L 413


>gi|402871705|ref|XP_003899794.1| PREDICTED: protein LAP2 isoform 1 [Papio anubis]
          Length = 1370

 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 111/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 VVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+SA
Sbjct: 235 LDVSKNNI-----EMVEEGISA 251



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  ++  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNIRTFAADHNYLQQLPPEI 341



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 94/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+ E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 244 MVEEGISA-CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP +IG +L N++T + + N +  LP  +    ++ VL    N L++LP
Sbjct: 303 ELDCSFNEVEALPSSIG-QLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402


>gi|395825402|ref|XP_003785924.1| PREDICTED: protein LAP2 isoform 1 [Otolemur garnettii]
          Length = 1372

 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 106/183 (57%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  L
Sbjct: 217 NRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIG-SL 275

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  LTS+  LD   N +++LP  +  L N+       N  Y
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTFAADHN--Y 333

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+  LP+ +G ++KL+ ++L  N L + P    + Q L
Sbjct: 334 LQQLPPEIGSWKNITVLFLHSNKLEILPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQL 393

Query: 200 SAV 202
           +A+
Sbjct: 394 TAM 396



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 106/187 (56%), Gaps = 10/187 (5%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L  + A+ N + +LPD 
Sbjct: 74  LSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPD- 132

Query: 76  IGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            GF +L+NL  L +N   +  LP +   LT L++L+ R N LK LP+ +  L  LE L++
Sbjct: 133 -GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDL 191

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N ++ E +P  +  L  L E  +  N++T +P  IG L++L  L +  N +     ++
Sbjct: 192 GSN-EFTE-VPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNI-----EM 244

Query: 195 VEQGLSA 201
           +E+G+SA
Sbjct: 245 IEEGISA 251



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLTSIEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP S+G L  ++  + + N L   P ++
Sbjct: 312 EALPSSVGQLTNIRTFAADHNYLQQLPPEI 341



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 93/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           MI E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 244 MIEEGISA-CENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLTSIE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP ++G +L N++T + + N +  LP  +    ++ VL    N L+ LP
Sbjct: 303 ELDCSFNEVEALPSSVG-QLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLEILP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402


>gi|348524990|ref|XP_003450005.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Oreochromis
           niloticus]
          Length = 570

 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 112/195 (57%), Gaps = 4/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P S+   L  +  L ++SN+L+ LP  +GCLS L  L +S N L SLP ++++ + L  
Sbjct: 103 LPTSI-KELTQLTELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLRM 161

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   NKLR++P  + + L +L TL +  N+I  + + + +L+ L +L  R N +K LP 
Sbjct: 162 LDLRHNKLREIPPVV-YRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPA 220

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L  L+++ N   LE LP  IG    +  LD+ +N++  LP++IG L  + +L 
Sbjct: 221 EIGELCSLITLDVAHN--QLEHLPKEIGHCTQITNLDLQHNELLDLPETIGNLASINRLG 278

Query: 182 LEGNPLVSPPMDVVE 196
           L  N L + P  + +
Sbjct: 279 LRYNRLSAIPRSLAQ 293



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/183 (33%), Positives = 97/183 (53%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N   LD+    +  LP SI  L++L  L +  N L+SLP  +     L  L  + N L  
Sbjct: 89  NSTRLDLSKRSIHTLPTSIKELTQLTELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTS 148

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LPD++   L  L+ L +  NK+  +P  +  LTSL  L  R N + ++ +D+ NL  L +
Sbjct: 149 LPDSLD-SLKKLRMLDLRHNKLREIPPVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTM 207

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L+I +N   ++ LP  IG L SL+ LDV++N++  LP  IG   ++  L L+ N L+  P
Sbjct: 208 LSIREN--KIKQLPAEIGELCSLITLDVAHNQLEHLPKEIGHCTQITNLDLQHNELLDLP 265

Query: 192 MDV 194
             +
Sbjct: 266 ETI 268



 Score = 81.6 bits (200), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 92/160 (57%), Gaps = 2/160 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           ++V L++ +NQL  +P  I  L+ L+VL +S NLL+ LP  I N R L EL+   NKL  
Sbjct: 391 SMVELNLATNQLTKIPEDICGLASLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLEC 450

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ I + L +L+ L +  N++ +LP+ + HL +L  L    N L+ LPE++  L NLE 
Sbjct: 451 LPNEIAY-LKDLQKLVLTNNQLTMLPRGIGHLLNLTHLGLGENQLQHLPEEIGTLENLEE 509

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           L ++ N   L +LP+ + L   L  + +    +T LP  I
Sbjct: 510 LYLNDN-PNLHSLPFELALCSKLSIMSIENCPLTHLPPQI 548



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 101/187 (54%), Gaps = 12/187 (6%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           + +L +  N++K LP  IG L  L  LDV+ N LE LPK I +C  +  L+   N+L  L
Sbjct: 205 LTMLSIRENKIKQLPAEIGELCSLITLDVAHNQLEHLPKEIGHCTQITNLDLQHNELLDL 264

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEV 131
           P+TIG  L ++  L +  N++  +P+SL     L  L+   N +  LPE  L +L+NL  
Sbjct: 265 PETIG-NLASINRLGLRYNRLSAIPRSLAQCRELEELNLENNNISVLPEGLLSSLVNLTS 323

Query: 132 LNISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNP 186
           L +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N 
Sbjct: 324 LTLARNCFQS-----YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQ 378

Query: 187 LVSPPMD 193
           L + P+D
Sbjct: 379 LTALPLD 385



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 105/230 (45%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N+L  LP +IG L+ +  L +  N L ++P+++  CR LEELN   N +  L
Sbjct: 251 ITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIPRSLAQCRELEELNLENNNISVL 310

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+ +   L+NL +L++  NC                                        
Sbjct: 311 PEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLS 370

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N L  +PED+  L +LEVL +S N   L+ L
Sbjct: 371 KLNMKDNQLTALPLDFGTWTSMVELNLATNQLTKIPEDICGLASLEVLILSNNL--LKKL 428

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ IG L  L ELD+  NK+  LP+ I  L+ LQKL L  N L   P  +
Sbjct: 429 PHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLVLTNNQLTMLPRGI 478



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 95/177 (53%), Gaps = 8/177 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L +LP       S+ ELN   N+L
Sbjct: 345 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTALPLDFGTWTSMVELNLATNQL 402

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ I   L +L+ L ++ N +  LP  + +L  LR LD   N L+ LP ++  L +L
Sbjct: 403 TKIPEDI-CGLASLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDL 461

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           + L ++ N   L  LP  IG L++L  L +  N++  LP+ IG L  L++L L  NP
Sbjct: 462 QKLVLTNN--QLTMLPRGIGHLLNLTHLGLGENQLQHLPEEIGTLENLEELYLNDNP 516


>gi|334321689|ref|XP_001379482.2| PREDICTED: leucine-rich repeat-containing protein 7 [Monodelphis
           domestica]
          Length = 1571

 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 108/184 (58%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP SIG L  L  LD+S N +E++   I  C +LE+
Sbjct: 229 LPEVL-EQIQNLRELWMDNNALQTLPGSIGKLKMLVYLDMSKNRIETVDLDISGCEALED 287

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+QLPD+IG  L  L TL ++ N++ +LP ++ +L+ L   D   N L+SLP 
Sbjct: 288 LLLSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTVLPNAIGNLSLLEEFDCSCNELESLPA 346

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L + +NF  L  LP  IG   ++  + +  NK+  LP+ IG ++KL+ L+
Sbjct: 347 TIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLN 404

Query: 182 LEGN 185
           L  N
Sbjct: 405 LSDN 408



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/233 (33%), Positives = 109/233 (46%), Gaps = 50/233 (21%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP +I  L  LK LD+S N ++  P+ I+ C+ L 
Sbjct: 89  EELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLT 148

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +LINL  L +N   +  LP +   L  LR+L+ R N LK+L
Sbjct: 149 IIEASVNPISKLPD--GFTQLINLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTL 206

Query: 120 PEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELD 158
           P+ +  L  LE L++  N                        L+TLP SIG L  LV LD
Sbjct: 207 PKSMHKLAQLERLDLGNNEFSELPEVLEQIQNLRELWMDNNALQTLPGSIGKLKMLVYLD 266

Query: 159 VSYNKITT-----------------------LPDSIGCLRKLQKLSLEGNPLV 188
           +S N+I T                       LPDSIG L+KL  L ++ N L 
Sbjct: 267 MSKNRIETVDLDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLT 319



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 73/137 (53%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +P+S+   L  +  L V  NQL  LPN+IG LS L+  D S N LESLP TI    SL 
Sbjct: 297 QLPDSI-GLLKKLTTLKVDDNQLTVLPNAIGNLSLLEEFDCSCNELESLPATIGYLHSLR 355

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L  + N L +LP  IG    N+  +S+  NK+  LP+ +  +  LRVL+   N LK+LP
Sbjct: 356 TLAVDENFLPELPREIG-SCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLP 414

Query: 121 EDLENLINLEVLNISQN 137
                L  L  L +S N
Sbjct: 415 FSFTKLKELAALWLSDN 431



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 69  LRQLP-DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P +   FE   L+ L ++ N+I  LP+ L +  +LR L    N L +LP  + +L+
Sbjct: 64  LQQVPKEVFNFERT-LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLV 122

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           NL+ L+IS+N   ++  P +I     L  ++ S N I+ LPD    L  L +L L
Sbjct: 123 NLKELDISKNG--VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLINLTQLYL 175



 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 38/61 (62%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP  IG + KL+VL++S N L++LP +    + L  L  + N+ + 
Sbjct: 376 NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKA 435

Query: 72  L 72
           L
Sbjct: 436 L 436


>gi|345289739|gb|AEN81361.1| AT2G17440-like protein, partial [Capsella rubella]
 gi|345289741|gb|AEN81362.1| AT2G17440-like protein, partial [Capsella rubella]
 gi|345289743|gb|AEN81363.1| AT2G17440-like protein, partial [Capsella rubella]
 gi|345289745|gb|AEN81364.1| AT2G17440-like protein, partial [Capsella rubella]
 gi|345289747|gb|AEN81365.1| AT2G17440-like protein, partial [Capsella rubella]
 gi|345289749|gb|AEN81366.1| AT2G17440-like protein, partial [Capsella rubella]
 gi|345289751|gb|AEN81367.1| AT2G17440-like protein, partial [Capsella rubella]
 gi|345289753|gb|AEN81368.1| AT2G17440-like protein, partial [Capsella rubella]
          Length = 164

 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 101/165 (61%), Gaps = 3/165 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+HSN++  LP SIG L  L  L++SGN L SLP        LEEL+ + N L  LP++
Sbjct: 3   LDLHSNRIGQLPESIGDLVYLVNLNLSGNQLSSLPPAFSRLIHLEELDLSSNSLSTLPES 62

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L++LK L +  N I  +P +++  +SL+ L A  N LK+LPE +  L  LE+L + 
Sbjct: 63  IG-SLVSLKKLDVETNNIEEIPHNISGCSSLKELRADYNRLKALPEAVGKLSTLEILTV- 120

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             +  +  LP ++  + +L ELDVS+N++ ++P+S+   + L KL
Sbjct: 121 -RYNNIRQLPTTMSSMANLKELDVSFNELESVPESLCHAKTLVKL 164



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/116 (42%), Positives = 75/116 (64%), Gaps = 1/116 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +RL+++  LD+ SN L  LP SIG L  LK LDV  N +E +P  I  C SL+EL A++N
Sbjct: 41  SRLIHLEELDLSSNSLSTLPESIGSLVSLKKLDVETNNIEEIPHNISGCSSLKELRADYN 100

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDL 123
           +L+ LP+ +G +L  L+ L++  N I  LP +++ + +L+ LD   N L+S+PE L
Sbjct: 101 RLKALPEAVG-KLSTLEILTVRYNNIRQLPTTMSSMANLKELDVSFNELESVPESL 155



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 94/156 (60%), Gaps = 4/156 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+   L+ +V L++  NQL  LP +   L  L+ LD+S N L +LP++I +  SL++
Sbjct: 13  LPESI-GDLVYLVNLNLSGNQLSSLPPAFSRLIHLEELDLSSNSLSTLPESIGSLVSLKK 71

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N + ++P  I     +LK L  + N++  LP+++  L++L +L  R N ++ LP 
Sbjct: 72  LDVETNNIEEIPHNISG-CSSLKELRADYNRLKALPEAVGKLSTLEILTVRYNNIRQLPT 130

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVEL 157
            + ++ NL+ L++S  F  LE++P S+    +LV+L
Sbjct: 131 TMSSMANLKELDVS--FNELESVPESLCHAKTLVKL 164



 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 78/125 (62%), Gaps = 3/125 (2%)

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L+ + N++ QLP++IG +L+ L  L+++ N++  LP + + L  L  LD   N L +LP
Sbjct: 2   KLDLHSNRIGQLPESIG-DLVYLVNLNLSGNQLSSLPPAFSRLIHLEELDLSSNSLSTLP 60

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E + +L++L+ L++  N   +E +P++I    SL EL   YN++  LP+++G L  L+ L
Sbjct: 61  ESIGSLVSLKKLDVETN--NIEEIPHNISGCSSLKELRADYNRLKALPEAVGKLSTLEIL 118

Query: 181 SLEGN 185
           ++  N
Sbjct: 119 TVRYN 123



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 73/141 (51%), Gaps = 5/141 (3%)

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L ++ N+I  LP+S+  L  L  L+   N L SLP     LI+LE L++S N   L TLP
Sbjct: 3   LDLHSNRIGQLPESIGDLVYLVNLNLSGNQLSSLPPAFSRLIHLEELDLSSN--SLSTLP 60

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGY 205
            SIG L+SL +LDV  N I  +P +I     L++L  + N L + P  V   G  +    
Sbjct: 61  ESIGSLVSLKKLDVETNNIEEIPHNISGCSSLKELRADYNRLKALPEAV---GKLSTLEI 117

Query: 206 LSEKMNNDHKSPKKKSWVGKL 226
           L+ + NN  + P   S +  L
Sbjct: 118 LTVRYNNIRQLPTTMSSMANL 138


>gi|431896988|gb|ELK06252.1| Leucine-rich repeat-containing protein 40 [Pteropus alecto]
          Length = 574

 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/213 (38%), Positives = 117/213 (54%), Gaps = 31/213 (14%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP S +  L ++V L++ SNQLK LP  I  + +LK LD + NLLE++P  +    SLE 
Sbjct: 162 IPASFS--LSSLVRLNLSSNQLKSLPAEISGMKRLKHLDCNSNLLETIPPELAGMESLEL 219

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVIL-PQSLTHLTSLRVLDARLNCLKSLP 120
           L    NKLR LP+    +L  LK L +  N+I +L  + L HLTS+ VLD R N LKS+P
Sbjct: 220 LYLRRNKLRFLPEFPSCKL--LKELHVGENQIEMLGAEHLKHLTSILVLDLRDNKLKSVP 277

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E+                         I LL SL  LD+S N I++LP S+G L  L+ L
Sbjct: 278 EE-------------------------ITLLQSLERLDLSNNDISSLPCSLGKLH-LKFL 311

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNND 213
           +LEGNP+ +   +++ +G   V  YL  K+ ++
Sbjct: 312 ALEGNPIRTIRREIINKGTQEVLKYLRSKIKDN 344



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 96/162 (59%), Gaps = 6/162 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           + VLD+H NQL  LP++I  L  L+ L+VS N L+ LP+ I N R+L+ L    N+L  +
Sbjct: 80  LTVLDIHDNQLTSLPSAIRELENLQRLNVSHNKLKILPEEITNLRNLKGLYLQHNELTCI 139

Query: 73  PDTIGFE-LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           P+  GFE L NL+ L ++ N++  +P S + L+SL  L+   N LKSLP ++  +  L+ 
Sbjct: 140 PE--GFEQLFNLEDLDLSNNRLTTIPASFS-LSSLVRLNLSSNQLKSLPAEISGMKRLKH 196

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGC 173
           L+ + N   LET+P  +  + SL  L +  NK+  LP+   C
Sbjct: 197 LDCNSNL--LETIPPELAGMESLELLYLRRNKLRFLPEFPSC 236



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 92/158 (58%), Gaps = 4/158 (2%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           + L  L +S N L+SL   +    +L  L+ + N+L  LP  I  EL NL+ L+++ NK+
Sbjct: 55  TDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIR-ELENLQRLNVSHNKL 113

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
            ILP+ +T+L +L+ L  + N L  +PE  E L NLE L++S N   L T+P S   L S
Sbjct: 114 KILPEEITNLRNLKGLYLQHNELTCIPEGFEQLFNLEDLDLSNN--RLTTIPASFS-LSS 170

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LV L++S N++ +LP  I  +++L+ L    N L + P
Sbjct: 171 LVRLNLSSNQLKSLPAEISGMKRLKHLDCNSNLLETIP 208



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 27/208 (12%)

Query: 29  SIGCLSKLKVLDVSGNLLESLPKTIENCRS---LEELNANFNKLRQLPDTIGFELINLKT 85
           +I  ++ LK+LD S      +P  + +      +  +N + N+L ++P  I  EL  + +
Sbjct: 366 NIHAITTLKILDYSDKQTTLIPDEVFDAVKSNIITSINFSKNELCEIPKRI-VELKEMVS 424

Query: 86  -LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN-FQYLET 143
            ++++ NK+  +   L  L  L  LD R N L SLP+++E+LI L+ +N+S N F+ L  
Sbjct: 425 DVNLSFNKLSFISVELCVLQKLTFLDLRNNFLSSLPKEMESLIRLQTINLSFNRFRILPE 484

Query: 144 LPYSIGLLMS---------------------LVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           + Y I  L +                     L+ LD+  N +  +P  +G    L+ L L
Sbjct: 485 VLYHIPTLETVLVSNNQVGSVDPEKLKTMENLITLDLQNNDLLQIPPELGNCVNLRTLLL 544

Query: 183 EGNPLVSPPMDVVEQGLSAVKGYLSEKM 210
           +GNP   P   ++ +G +A+  YL +++
Sbjct: 545 DGNPFRVPRAAILMKGTAAILEYLRDRI 572



 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 67/118 (56%), Gaps = 2/118 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +   +  L KL  LD+  N L SLPK +E+   L+ +N +FN+ R LP+ + + +
Sbjct: 431 NKLSFISVELCVLQKLTFLDLRNNFLSSLPKEMESLIRLQTINLSFNRFRILPEVL-YHI 489

Query: 81  INLKTLSINCNKI-VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
             L+T+ ++ N++  + P+ L  + +L  LD + N L  +P +L N +NL  L +  N
Sbjct: 490 PTLETVLVSNNQVGSVDPEKLKTMENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGN 547



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 2/114 (1%)

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
           +E  +L  L I+ NK+  L   L  L +L VLD   N L SLP  +  L NL+ LN+S N
Sbjct: 52  WEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQRLNVSHN 111

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
              L+ LP  I  L +L  L + +N++T +P+    L  L+ L L  N L + P
Sbjct: 112 --KLKILPEEITNLRNLKGLYLQHNELTCIPEGFEQLFNLEDLDLSNNRLTTIP 163


>gi|418707326|ref|ZP_13268152.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772373|gb|EKR47561.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|456971331|gb|EMG11964.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 354

 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +H NQL  LP  I  L  L++L +  N L +LPK IE  ++L+ L+   N
Sbjct: 66  GKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L ++ N++  L + +  L +L+ LD   N L +LP ++E L 
Sbjct: 126 QLTVLPQEIE-QLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLK 184

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +S+N     T P  IG L +L  L ++ N+IT LP+ I  L+KLQ L L  N L
Sbjct: 185 NLKSLYLSEN--QFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQL 242

Query: 188 VSPPMDV 194
           ++ P ++
Sbjct: 243 ITLPKEI 249



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 126/242 (52%), Gaps = 31/242 (12%)

Query: 9   RLLNVVVLDVHSNQLKCLP----------------NSIGCLSK-------LKVLDVSGNL 45
           +L N+ VLD+ SNQL  LP                N +  LSK       LK LD+S N 
Sbjct: 113 QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQ 172

Query: 46  LESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTS 105
           L +LP  IE  ++L+ L  + N+    P  IG +L NLK L +N N+I ILP  +  L  
Sbjct: 173 LTTLPNEIEQLKNLKSLYLSENQFATFPKEIG-QLQNLKVLFLNNNQITILPNEIAKLKK 231

Query: 106 LRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
           L+ L    N L +LP+++E L NL+ L++  N   L+TLP  I  L +L  L +S N++T
Sbjct: 232 LQYLYLSDNQLITLPKEIEQLENLQTLDLRNN--QLKTLPKEIEQLKNLQTLFLSNNQLT 289

Query: 166 TLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGK 225
            LP  IG L+ L  LSL  N L + P ++       +K   +  +NN+  S ++K  + K
Sbjct: 290 ILPQEIGKLKNLLWLSLVYNQLTTLPNEI-----EQLKNLQTLYLNNNQFSSQEKKRIRK 344

Query: 226 LV 227
           L+
Sbjct: 345 LL 346



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 103/186 (55%), Gaps = 3/186 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V VLD+   +LK LP  IG L  L+ L +  N L  LP+ IE  ++L+ L    N+L 
Sbjct: 46  LEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLT 105

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  I  +L NL+ L +  N++ +LPQ +  L +L++L    N L +L +D+E L NL+
Sbjct: 106 TLPKEIE-QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLK 164

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++S N   L TLP  I  L +L  L +S N+  T P  IG L+ L+ L L  N +   
Sbjct: 165 SLDLSNN--QLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 191 PMDVVE 196
           P ++ +
Sbjct: 223 PNEIAK 228



 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 92/161 (57%), Gaps = 4/161 (2%)

Query: 48  SLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
            L K ++N   +  L+ +  +L+ LP  IG +L NL+ L ++ N++ +LPQ +  L +L+
Sbjct: 37  DLTKALQNPLEVRVLDLSRQELKTLPIEIG-KLKNLQRLYLHYNQLTVLPQEIEQLKNLQ 95

Query: 108 VLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
           +L  R N L +LP+++E L NL+VL++  N   L  LP  I  L +L  L +  N++TTL
Sbjct: 96  LLYLRSNRLTTLPKEIEQLKNLQVLDLGSN--QLTVLPQEIEQLKNLQLLYLHSNRLTTL 153

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSE 208
              I  L+ L+ L L  N L + P + +EQ  +    YLSE
Sbjct: 154 SKDIEQLQNLKSLDLSNNQLTTLPNE-IEQLKNLKSLYLSE 193



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 1/102 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A+L  +  L +  NQL  LP  I  L  L+ LD+  N L++LPK IE  ++L+ L  + N
Sbjct: 227 AKLKKLQYLYLSDNQLITLPKEIEQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNN 286

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           +L  LP  IG +L NL  LS+  N++  LP  +  L +L+ L
Sbjct: 287 QLTILPQEIG-KLKNLLWLSLVYNQLTTLPNEIEQLKNLQTL 327


>gi|395825408|ref|XP_003785927.1| PREDICTED: protein LAP2 isoform 4 [Otolemur garnettii]
          Length = 1347

 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 106/183 (57%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  L
Sbjct: 217 NRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIG-SL 275

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  LTS+  LD   N +++LP  +  L N+       N  Y
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTFAADHN--Y 333

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+  LP+ +G ++KL+ ++L  N L + P    + Q L
Sbjct: 334 LQQLPPEIGSWKNITVLFLHSNKLEILPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQL 393

Query: 200 SAV 202
           +A+
Sbjct: 394 TAM 396



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 106/187 (56%), Gaps = 10/187 (5%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L  + A+ N + +LPD 
Sbjct: 74  LSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPD- 132

Query: 76  IGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            GF +L+NL  L +N   +  LP +   LT L++L+ R N LK LP+ +  L  LE L++
Sbjct: 133 -GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDL 191

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N ++ E +P  +  L  L E  +  N++T +P  IG L++L  L +  N +     ++
Sbjct: 192 GSN-EFTE-VPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNI-----EM 244

Query: 195 VEQGLSA 201
           +E+G+SA
Sbjct: 245 IEEGISA 251



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLTSIEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP S+G L  ++  + + N L   P ++
Sbjct: 312 EALPSSVGQLTNIRTFAADHNYLQQLPPEI 341



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 93/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           MI E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 244 MIEEGISA-CENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLTSIE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP ++G +L N++T + + N +  LP  +    ++ VL    N L+ LP
Sbjct: 303 ELDCSFNEVEALPSSVG-QLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLEILP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402


>gi|355686423|gb|AER98051.1| erbb2 interacting protein [Mustela putorius furo]
          Length = 1093

 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 106/183 (57%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  L
Sbjct: 198 NRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIG-SL 256

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  Y
Sbjct: 257 KNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSVGQLTNIRTFAADHN--Y 314

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q L
Sbjct: 315 LQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQL 374

Query: 200 SAV 202
           +A+
Sbjct: 375 TAM 377



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 106/187 (56%), Gaps = 10/187 (5%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L  + A+ N + +LPD 
Sbjct: 55  LSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPD- 113

Query: 76  IGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            GF +L+NL  L +N   +  LP +   LT L++L+ R N LK LP+ +  L  LE L++
Sbjct: 114 -GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDL 172

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N ++ E +P  +  L  L E  +  N++T +P  IG L++L  L +  N +     ++
Sbjct: 173 GSN-EFTE-VPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNI-----EM 225

Query: 195 VEQGLSA 201
           +E+G+SA
Sbjct: 226 IEEGISA 232



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 5   VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 64

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 65  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQ 123

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 124 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 181

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 182 -EVLEQ-LSGLKEF 193



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 116 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 175

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 176 EFTEVPEVLE-QLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACE 234

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 235 NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLVSIEELDCSFNEV 292

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP S+G L  ++  + + N L   P ++
Sbjct: 293 EALPSSVGQLTNIRTFAADHNYLQQLPPEI 322



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 94/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           MI E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 225 MIEEGISA-CENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIE 283

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP ++G +L N++T + + N +  LP  +    ++ VL    N L++LP
Sbjct: 284 ELDCSFNEVEALPSSVG-QLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLP 342

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 343 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 383


>gi|296198441|ref|XP_002746706.1| PREDICTED: leucine-rich repeat-containing protein 1 [Callithrix
           jacchus]
          Length = 524

 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 111/193 (57%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+S    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 120 LPKSF-PELENLTCLSVNDVSLQSLPENIGNLYNLTSLELRENLLTYLPDSLTQLRRLEE 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP+++G  L+ LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 179 LDLGNNEIHSLPESVG-ALLCLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPE 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L  L ISQN   LET+P  IG L  L  L V  N++T LP+++G    L +L 
Sbjct: 238 EISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELV 295

Query: 182 LEGNPLVSPPMDV 194
           L  N L++ P  +
Sbjct: 296 LTENQLLTLPKSI 308



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 119/250 (47%), Gaps = 32/250 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LPK+     +L  L+ N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLMRLPKSFPELENLTCLSVNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD-------------ARLN 114
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD               L 
Sbjct: 139 SLQSLPENIG-NLYNLTSLELRENLLTYLPDSLTQLRRLEELDLGNNEIHSLPESVGALL 197

Query: 115 CLKS----------LPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
           CLK           LP+++ NL NL  L++S+N   LE LP  I  L SL +L +S N +
Sbjct: 198 CLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN--RLERLPEEISGLTSLTDLVISQNLL 255

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVG 224
            T+PD IG L+KL  L ++ N L   P + V    S  +  L+E  N     PK    +G
Sbjct: 256 ETIPDGIGKLKKLSILKVDQNRLTQLP-EAVGDCESLTELVLTE--NQLLTLPKS---IG 309

Query: 225 KLVKYGTFNG 234
           KL K    N 
Sbjct: 310 KLKKLSNLNA 319



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 109/195 (55%), Gaps = 7/195 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   AR L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L
Sbjct: 27  VPEEIYRYARSLEELLLD--ANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N ++ LP+S   L +L  L      L+SL
Sbjct: 85  VELDVSRNDIPEIPESISF-CKALQIADFSGNPLMRLPKSFPELENLTCLSVNDVSLQSL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++ NL NL  L + +N   L  LP S+  L  L ELD+  N+I +LP+S+G L  L+ 
Sbjct: 144 PENIGNLYNLTSLELRENL--LTYLPDSLTQLRRLEELDLGNNEIHSLPESVGALLCLKD 201

Query: 180 LSLEGNPLVSPPMDV 194
           L L+GN L   P ++
Sbjct: 202 LWLDGNQLSELPQEI 216



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 103/193 (53%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+SLT +L  +  LD+ +N++  LP S+G L  LK L + GN L  LP+ I N ++L  
Sbjct: 166 LPDSLT-QLRRLEELDLGNNEIHSLPESVGALLCLKDLWLDGNQLSELPQEIGNLKNLLC 224

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L +LP+ I   L +L  L I+ N +  +P  +  L  L +L    N L  LPE
Sbjct: 225 LDVSENRLERLPEEISG-LTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPE 283

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + +  +L  L +++N   L TLP SIG L  L  L+   NK+ +LP  IG    L    
Sbjct: 284 AVGDCESLTELVLTEN--QLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFC 341

Query: 182 LEGNPLVSPPMDV 194
           L  N L   P +V
Sbjct: 342 LRDNRLTRIPAEV 354



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 96/176 (54%), Gaps = 4/176 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N++ LDV  N+L+ LP  I  L+ L  L +S NLLE++P  I   + L  L  + N+L
Sbjct: 219 LKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRL 278

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            QLP+ +G +  +L  L +  N+++ LP+S+  L  L  L+A  N L SLP+++    +L
Sbjct: 279 TQLPEAVG-DCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSL 337

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            V  +  N   L  +P  +     L  LD++ N++  LP S+  L KL+ L L  N
Sbjct: 338 TVFCLRDN--RLTRIPAEVSQATELHVLDLAGNRLLHLPLSLTAL-KLKALWLSDN 390



 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 2/103 (1%)

Query: 89  NCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSI 148
           +C+ + +  +   +  SL  L    N L+ LPE    L+ L  L +S N   ++ LP  I
Sbjct: 21  HCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDN--EIQRLPPEI 78

Query: 149 GLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
              M LVELDVS N I  +P+SI   + LQ     GNPL+  P
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLMRLP 121


>gi|124002073|ref|ZP_01686927.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123992539|gb|EAY31884.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 506

 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 104/193 (53%), Gaps = 7/193 (3%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           NQL  LP  IG +  L++L +  NLL +LP TI   + LEEL    N L  LP  I   L
Sbjct: 299 NQLSELPTEIGLVGDLRILCLEENLLTTLPNTIGQLKCLEELRIWKNDLVALPLEID-SL 357

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            NL TL I+ NK+   P  +T L  L+ L+   N L  LP+++  L+ LE LN+  N   
Sbjct: 358 KNLHTLDISFNKLSTFPLQITQLEGLQKLNVAENGLTDLPDEINQLVKLEELNLGGN--N 415

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE---- 196
           L +LP  +  L  L  LD+ YN++  LP  +  L  LQ+L+L GN L + P+++ +    
Sbjct: 416 LTSLPAGLAKLQKLQNLDLRYNELEVLPSEVFALSNLQELNLMGNYLTTIPVEITKLKKL 475

Query: 197 QGLSAVKGYLSEK 209
           Q L    G +SE+
Sbjct: 476 QYLYLQHGLISEQ 488



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 99/187 (52%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A L ++  LD  +  L  LP  +G L+ L  L ++ N L  LP  I N   L+EL    N
Sbjct: 102 AGLTHLQKLDCMAIGLTILPPEVGALTNLYKLRLNRNELTILPAEIGNLTKLQELYITDN 161

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  L   IG  L  L+ L +  N++V LP  +  LT L+ L+   N L +LP ++  L 
Sbjct: 162 RLSALSAEIG-NLTQLQKLELAVNRLVALPAEIGKLTQLKKLEVGSNQLTTLPAEISGLT 220

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +LE L I  N     TLP  IG L +L  L VS N++ TLP  IG L  LQ+L +E N L
Sbjct: 221 SLEELYIDNN--QFTTLPTEIGTLSNLKFLYVSDNQLATLPSEIGNLTTLQELYIEENQL 278

Query: 188 VSPPMDV 194
           ++ P ++
Sbjct: 279 IALPAEI 285



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/198 (36%), Positives = 97/198 (48%), Gaps = 24/198 (12%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L + +NQ   LP  IG LS LK L VS N L +LP  I N  +L+EL    N+L  LP  
Sbjct: 225 LYIDNNQFTTLPTEIGTLSNLKFLYVSDNQLATLPSEIGNLTTLQELYIEENQLIALPAE 284

Query: 76  IGFELI----------------------NLKTLSINCNKIVILPQSLTHLTSLRVLDARL 113
           IG                          +L+ L +  N +  LP ++  L  L  L    
Sbjct: 285 IGTLQSLQLLHLQSNQLSELPTEIGLVGDLRILCLEENLLTTLPNTIGQLKCLEELRIWK 344

Query: 114 NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGC 173
           N L +LP ++++L NL  L+IS  F  L T P  I  L  L +L+V+ N +T LPD I  
Sbjct: 345 NDLVALPLEIDSLKNLHTLDIS--FNKLSTFPLQITQLEGLQKLNVAENGLTDLPDEINQ 402

Query: 174 LRKLQKLSLEGNPLVSPP 191
           L KL++L+L GN L S P
Sbjct: 403 LVKLEELNLGGNNLTSLP 420



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/179 (38%), Positives = 107/179 (59%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L++  N+L  LP  IG L++LK L+V  N L +LP  I    SLEEL  + N+   LP  
Sbjct: 179 LELAVNRLVALPAEIGKLTQLKKLEVGSNQLTTLPAEISGLTSLEELYIDNNQFTTLPTE 238

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L NLK L ++ N++  LP  + +LT+L+ L    N L +LP ++  L +L++L++ 
Sbjct: 239 IG-TLSNLKFLYVSDNQLATLPSEIGNLTTLQELYIEENQLIALPAEIGTLQSLQLLHLQ 297

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L  LP  IGL+  L  L +  N +TTLP++IG L+ L++L +  N LV+ P+++
Sbjct: 298 SN--QLSELPTEIGLVGDLRILCLEENLLTTLPNTIGQLKCLEELRIWKNDLVALPLEI 354


>gi|299472413|emb|CBN77601.1| Hypothetical leucine rich repeat protein [Ectocarpus siliculosus]
          Length = 848

 Score =  100 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 72/211 (34%), Positives = 118/211 (55%), Gaps = 5/211 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ L   L  +  L++  N+L  LPN  G L +L+ L ++GN LE++P +  N   L++
Sbjct: 204 IPDGL-CDLTALTELNLVRNKLSDLPNRFGNLLRLRNLSLAGNRLETIPPSFGNLLRLDQ 262

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           +  + N LR+LP+T+G   +  + L+++ NK+  LP  L  +  L  + A  N L+SLP 
Sbjct: 263 VVLDCNALRRLPETLG--RMKCRWLNVSNNKLAGLPHCLKDMPRLTKISAVNNGLRSLPS 320

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           D+ +  +L  L+++ N   L  LP SI  L +L  L + +N I  LP     L  LQ+L 
Sbjct: 321 DIGDSRSLTALHLASN--RLNQLPDSICRLKTLKVLWLDHNYIAGLPMMFHQLGGLQQLM 378

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNN 212
           LE N +V PP +V+ QG   V+ +   +M++
Sbjct: 379 LEQNDMVYPPKEVILQGCDRVRAWCYRRMHD 409



 Score = 37.7 bits (86), Expect = 5.6,   Method: Composition-based stats.
 Identities = 42/123 (34%), Positives = 70/123 (56%), Gaps = 3/123 (2%)

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L ++P  IG  L++LK+LS++ N +  +P  L  LT+L  L+   N L  LP    NL+ 
Sbjct: 177 LTEVPGAIGQNLLSLKSLSLSSNALEEIPDGLCDLTALTELNLVRNKLSDLPNRFGNLLR 236

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L  L+++ N   LET+P S G L+ L ++ +  N +  LP+++G + K + L++  N L 
Sbjct: 237 LRNLSLAGN--RLETIPPSFGNLLRLDQVVLDCNALRRLPETLGRM-KCRWLNVSNNKLA 293

Query: 189 SPP 191
             P
Sbjct: 294 GLP 296


>gi|109085638|ref|XP_001090936.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           [Macaca mulatta]
          Length = 1052

 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 119/250 (47%), Gaps = 44/250 (17%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P  L A L  +  LDV  N+L  LP+S+ CLS+L+ LDV  N L + P+ +    +LEE
Sbjct: 150 LPAQLGA-LAQLEELDVSFNRLTHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEE 208

Query: 62  LNANFNKLRQLPDTI---------------------GF-ELINLKTLSINCNKIVILPQS 99
           L+ + N+LR LP+ I                     GF EL +L++L ++ N +  LP  
Sbjct: 209 LDVSSNRLRGLPEDISALCALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQ 268

Query: 100 LTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNF--------------------- 138
            + L  L++L+   N L+  P  L  L  LE L +S+N                      
Sbjct: 269 FSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDN 328

Query: 139 QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQG 198
             +  LP SI  L  L EL +  N+I  LPD+ G L ++    ++ NPL+ PP +V  +G
Sbjct: 329 NRIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKG 388

Query: 199 LSAVKGYLSE 208
           +  +  Y  E
Sbjct: 389 IPYIAAYQKE 398



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 92/171 (53%), Gaps = 4/171 (2%)

Query: 16  LDVHSNQLKCL-PNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           LDV  N+L  L    +  L +L+ L++S N L +LP  +     LEEL+ +FN+L  LPD
Sbjct: 116 LDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAQLEELDVSFNRLTHLPD 175

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
           ++   L  L+TL ++ N++   P+ L  L +L  LD   N L+ LPED+  L  L++L +
Sbjct: 176 SLSC-LSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALCALKILWL 234

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           S     L TLP     L SL  L +  N +  LP     L++L+ L+L  N
Sbjct: 235 SG--AELGTLPAGFCELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSN 283



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 80/146 (54%), Gaps = 8/146 (5%)

Query: 55  NCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLT----HLTSLRVLD 110
           N   +E LN   N L ++P+ +G  L +L+ L +  N+   LP ++     HLT L V  
Sbjct: 61  NLGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSH 120

Query: 111 ARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDS 170
            RL  L +  E +  L  L  LN+S N   L  LP  +G L  L ELDVS+N++T LPDS
Sbjct: 121 NRLTALGA--EVVSALRELRKLNLSHN--QLPALPAQLGALAQLEELDVSFNRLTHLPDS 176

Query: 171 IGCLRKLQKLSLEGNPLVSPPMDVVE 196
           + CL +L+ L ++ N L + P  +++
Sbjct: 177 LSCLSRLRTLDVDHNQLTAFPRQLLQ 202


>gi|418707313|ref|ZP_13268139.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772360|gb|EKR47548.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 378

 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/179 (39%), Positives = 104/179 (58%), Gaps = 3/179 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL +   +LK LP  IG L  L++LD+S N L  LPK I   ++L+EL  N+N+L 
Sbjct: 47  LDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLT 106

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
             P  I  +L +L  L ++ N++ ILP  +  L +LR L+   N LK++ +++E L NL+
Sbjct: 107 TFPKEIE-QLKSLHKLYLSNNQLTILPVEIGQLQNLRELNLWNNQLKTISKEIEQLKNLQ 165

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
            L +  N   L   P  IG L +L  L +S N++TT P  IG L+ LQ+L L  N L +
Sbjct: 166 KLYLDNN--QLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLHDNQLTT 222



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 106/186 (56%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L + +NQL   P  IG L  LK L +S N L + PK I   ++L+EL  + N+
Sbjct: 160 QLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLHDNQ 219

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L      IG +L NL+ L +N N+  ILP+ + HL +L+ L    N  K LP+++  L N
Sbjct: 220 LTTFTKEIG-QLKNLRILLLNNNQFKILPEEIGHLKNLQALYLHDNQFKILPKEIGQLQN 278

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+VL +S N    +T+P   G L +L  L +  N++T LP  IG L+ L+ L+L+ N L 
Sbjct: 279 LQVLFLSYN--QFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLT 336

Query: 189 SPPMDV 194
           + P ++
Sbjct: 337 TIPKEI 342



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 109/216 (50%), Gaps = 27/216 (12%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L N+ +LD+  NQL  LP  I  L  L+ L ++ N L + PK IE  +SL +
Sbjct: 62  LPEKI-GQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHK 120

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+L  LP  IG +L NL+ L++  N++  + + +  L +L+ L    N L + P+
Sbjct: 121 LYLSNNQLTILPVEIG-QLQNLRELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPK 179

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITT--------------- 166
           ++  L NL+ L +S N   L T P  IG L +L EL +  N++TT               
Sbjct: 180 EIGKLQNLKSLFLSNN--QLTTFPKEIGKLQNLQELYLHDNQLTTFTKEIGQLKNLRILL 237

Query: 167 --------LPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
                   LP+ IG L+ LQ L L  N     P ++
Sbjct: 238 LNNNQFKILPEEIGHLKNLQALYLHDNQFKILPKEI 273



 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 84/147 (57%), Gaps = 3/147 (2%)

Query: 48  SLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
            L K  +N   +  L  +  KL+ LP+ IG +L NL+ L ++ N+++ILP+ +  L +L+
Sbjct: 38  DLTKAFQNPLDVRVLILSEQKLKALPEKIG-QLKNLQMLDLSDNQLIILPKEIRQLKNLQ 96

Query: 108 VLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
            L    N L + P+++E L +L  L +S N   L  LP  IG L +L EL++  N++ T+
Sbjct: 97  ELFLNYNQLTTFPKEIEQLKSLHKLYLSNN--QLTILPVEIGQLQNLRELNLWNNQLKTI 154

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDV 194
              I  L+ LQKL L+ N L + P ++
Sbjct: 155 SKEIEQLKNLQKLYLDNNQLTAFPKEI 181



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 2/116 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++PE +   L N+  L +H NQ K LP  IG L  L+VL +S N  +++P      ++L+
Sbjct: 245 ILPEEI-GHLKNLQALYLHDNQFKILPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLK 303

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
            L+ + N+L  LP  IG +L NLK L+++ N++  +P+ +  L +L+ L  R N L
Sbjct: 304 MLSLDANQLTALPKEIG-KLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQL 358



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 1/88 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL +  NQ K +P   G L  LK+L +  N L +LPK I   ++L+ LN + N
Sbjct: 274 GQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDAN 333

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVI 95
           +L  +P  IG +L NL+TL +  N++ I
Sbjct: 334 QLTTIPKEIG-QLQNLQTLYLRNNQLSI 360



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 6/124 (4%)

Query: 75  TIGF-ELINLKTLSINCNKIVI---LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
           TIGF  L+NL      C +  I   L ++  +   +RVL      LK+LPE +  L NL+
Sbjct: 14  TIGFLFLMNLSCEIQACEEPGIYRDLTKAFQNPLDVRVLILSEQKLKALPEKIGQLKNLQ 73

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
           +L++S N   L  LP  I  L +L EL ++YN++TT P  I  L+ L KL L  N L   
Sbjct: 74  MLDLSDN--QLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTIL 131

Query: 191 PMDV 194
           P+++
Sbjct: 132 PVEI 135



 Score = 44.3 bits (103), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 3/91 (3%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L +  +N +++ VL +S+  Q L+ LP  IG L +L  LD+S N++  LP  I  L+ 
Sbjct: 37  RDLTKAFQNPLDVRVLILSE--QKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKN 94

Query: 177 LQKLSLEGNPLVSPPMDVVEQGLSAVKGYLS 207
           LQ+L L  N L + P + +EQ  S  K YLS
Sbjct: 95  LQELFLNYNQLTTFPKE-IEQLKSLHKLYLS 124


>gi|428298451|ref|YP_007136757.1| small GTP-binding protein [Calothrix sp. PCC 6303]
 gi|428234995|gb|AFZ00785.1| small GTP-binding protein [Calothrix sp. PCC 6303]
          Length = 1408

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 110/190 (57%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE++ A+L N+  L V SNQ+  +P +I  LS L+ L VS N +  +P+ I    +L E
Sbjct: 164 IPEAI-AKLSNLRELHVSSNQITEIPEAIANLSNLRELHVSSNQITEIPEAIAKLINLRE 222

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + NK+ ++P+ I  +L NL+ L +  N+I  +P+ +  LT+L  LD   N +  + E
Sbjct: 223 LQVSSNKITEIPEVIA-KLTNLRKLYLRNNQITEIPEVIAKLTNLTQLDLSYNQITKISE 281

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L  LINL  + +  N   +  +P ++  L++L +LD+SYN+IT +P+++  L  L +L 
Sbjct: 282 ALAKLINLTQIILHNN--KITEIPDALAKLINLTQLDLSYNQITKIPEALAKLTNLTQLI 339

Query: 182 LEGNPLVSPP 191
           L  N +   P
Sbjct: 340 LYSNQITEIP 349



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 113/190 (59%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE+L A+L N+  L ++SN++  +P ++  L  L  + +S N +  +P+ +    +L +
Sbjct: 371 IPEAL-AKLTNLTQLILYSNRISEIPEALAKLINLTQIILSYNRISEIPEALAKLTNLTQ 429

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ ++N++ ++P+ +  +LINL  + ++ NKI  +P++L  LT+LR L    N +  +PE
Sbjct: 430 LDLSYNQITKIPEALA-KLINLTQIILHSNKITEIPEALAKLTNLRQLYLSYNRITEIPE 488

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L  L NL  LN+S N   +  +P ++  L +L +LD++ NKIT +P+++  L  L +L 
Sbjct: 489 ALAKLTNLTQLNLSDN--QIIKIPKALAKLSNLTQLDLNRNKITEIPEALAKLTNLTQLY 546

Query: 182 LEGNPLVSPP 191
           L  N +   P
Sbjct: 547 LRNNRITEIP 556



 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 62/190 (32%), Positives = 113/190 (59%), Gaps = 3/190 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE+L A+L+N+  + +HSN++  +P ++  L+ L+ L +S N +  +P+ +    +L +
Sbjct: 440 IPEAL-AKLINLTQIILHSNKITEIPEALAKLTNLRQLYLSYNRITEIPEALAKLTNLTQ 498

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N++ ++P  +  +L NL  L +N NKI  +P++L  LT+L  L  R N +  +PE
Sbjct: 499 LNLSDNQIIKIPKALA-KLSNLTQLDLNRNKITEIPEALAKLTNLTQLYLRNNRITEIPE 557

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L  L NL  L++  N+   E +P +I  L +L +L+++ ++IT +P+ I  L  L +L+
Sbjct: 558 ALAKLTNLTQLDLGTNYNISE-IPEAITKLTNLTQLNLTSSQITEIPEVIAKLTNLTQLN 616

Query: 182 LEGNPLVSPP 191
           L  N +   P
Sbjct: 617 LTSNQIAEIP 626



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 103/197 (52%), Gaps = 26/197 (13%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLP-----------------------KTIE 54
           V  N LK LP  +  L  L+ LD+SGN LES+P                       + I 
Sbjct: 64  VSGNNLKTLPLELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVELTEIPEAIA 123

Query: 55  NCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLN 114
           N  +L +L  N N + ++P+ I  +L NL+ L ++ NKI  +P+++  L++LR L    N
Sbjct: 124 NLSNLTQLYFNSNHISKIPELIA-KLSNLRELHVSSNKITEIPEAIAKLSNLRELHVSSN 182

Query: 115 CLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCL 174
            +  +PE + NL NL  L++S N   +  +P +I  L++L EL VS NKIT +P+ I  L
Sbjct: 183 QITEIPEAIANLSNLRELHVSSN--QITEIPEAIAKLINLRELQVSSNKITEIPEVIAKL 240

Query: 175 RKLQKLSLEGNPLVSPP 191
             L+KL L  N +   P
Sbjct: 241 TNLRKLYLRNNQITEIP 257



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 111/190 (58%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           I E+L A+L+N+  + +H+N++  +P+++  L  L  LD+S N +  +P+ +    +L +
Sbjct: 279 ISEAL-AKLINLTQIILHNNKITEIPDALAKLINLTQLDLSYNQITKIPEALAKLTNLTQ 337

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N++ ++P+ I  +L NL  L ++ N+I  +P++L  LT+L  L    N +  +PE
Sbjct: 338 LILYSNQITEIPEVIA-KLTNLTQLDLSYNQITKIPEALAKLTNLTQLILYSNRISEIPE 396

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L  LINL  + +S N   +  +P ++  L +L +LD+SYN+IT +P+++  L  L ++ 
Sbjct: 397 ALAKLINLTQIILSYN--RISEIPEALAKLTNLTQLDLSYNQITKIPEALAKLINLTQII 454

Query: 182 LEGNPLVSPP 191
           L  N +   P
Sbjct: 455 LHSNKITEIP 464



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 114/212 (53%), Gaps = 25/212 (11%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP++L A+L+N+  LD+  NQ+  +P ++  L+ L  L +  N +  +P+ I    +L +
Sbjct: 302 IPDAL-AKLINLTQLDLSYNQITKIPEALAKLTNLTQLILYSNQITEIPEVIAKLTNLTQ 360

Query: 62  LNANFNKLRQLPDTIG----------------------FELINLKTLSINCNKIVILPQS 99
           L+ ++N++ ++P+ +                        +LINL  + ++ N+I  +P++
Sbjct: 361 LDLSYNQITKIPEALAKLTNLTQLILYSNRISEIPEALAKLINLTQIILSYNRISEIPEA 420

Query: 100 LTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDV 159
           L  LT+L  LD   N +  +PE L  LINL  + +  N   +  +P ++  L +L +L +
Sbjct: 421 LAKLTNLTQLDLSYNQITKIPEALAKLINLTQIILHSN--KITEIPEALAKLTNLRQLYL 478

Query: 160 SYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           SYN+IT +P+++  L  L +L+L  N ++  P
Sbjct: 479 SYNRITEIPEALAKLTNLTQLNLSDNQIIKIP 510



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 93/167 (55%), Gaps = 3/167 (1%)

Query: 22  QLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELI 81
           +L  +P +I  LS L  L  + N +  +P+ I    +L EL+ + NK+ ++P+ I  +L 
Sbjct: 114 ELTEIPEAIANLSNLTQLYFNSNHISKIPELIAKLSNLRELHVSSNKITEIPEAIA-KLS 172

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I  +P+++ +L++LR L    N +  +PE +  LINL  L +S N   +
Sbjct: 173 NLRELHVSSNQITEIPEAIANLSNLRELHVSSNQITEIPEAIAKLINLRELQVSSN--KI 230

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
             +P  I  L +L +L +  N+IT +P+ I  L  L +L L  N + 
Sbjct: 231 TEIPEVIAKLTNLRKLYLRNNQITEIPEVIAKLTNLTQLDLSYNQIT 277



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 109/192 (56%), Gaps = 7/192 (3%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP++L A+L N+  LD++ N++  +P ++  L+ L  L +  N +  +P+ +    +L +
Sbjct: 509 IPKAL-AKLSNLTQLDLNRNKITEIPEALAKLTNLTQLYLRNNRITEIPEALAKLTNLTQ 567

Query: 62  LN--ANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
           L+   N+N + ++P+ I  +L NL  L++  ++I  +P+ +  LT+L  L+   N +  +
Sbjct: 568 LDLGTNYN-ISEIPEAIT-KLTNLTQLNLTSSQITEIPEVIAKLTNLTQLNLTSNQIAEI 625

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE +  L NL  L ++ N   +  +P +I  L +L +L+++ N+IT +P++I  L  L +
Sbjct: 626 PEAIAKLTNLTQLILTSN--QITEIPEAIAKLTNLTQLNLTSNQITKIPEAIAKLTNLTQ 683

Query: 180 LSLEGNPLVSPP 191
           L L  N +   P
Sbjct: 684 LILSYNQITEIP 695



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 120/246 (48%), Gaps = 38/246 (15%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE + A+L N+  L++ SNQ+  +P +I  L+ L  L ++ N +  +P+ I    +L +
Sbjct: 602 IPEVI-AKLTNLTQLNLTSNQIAEIPEAIAKLTNLTQLILTSNQITEIPEAIAKLTNLTQ 660

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N++ ++P+ I  +L NL  L ++ N+I  +P+++  LT+L  L    N +  +P+
Sbjct: 661 LNLTSNQITKIPEAIA-KLTNLTQLILSYNQITEIPEAIAKLTNLTQLILTSNQITEIPD 719

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP-------DSIGCL 174
            +  L N                         L +LD+SYN+I+ +P       D    L
Sbjct: 720 AITKLTN-------------------------LTQLDLSYNRISEIPLEILDSKDPKEIL 754

Query: 175 RKLQKLSL-EGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFN 233
             L+++S  E  PL    + +V QG S  K  L E++ +D     +    G  +K  T+N
Sbjct: 755 NYLRQISTSETRPLHEAKLLLVGQG-SVGKTSLIERLIHDKYDKNQHQTDG--LKVQTWN 811

Query: 234 GALRNH 239
            +++N 
Sbjct: 812 VSVKNQ 817



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 80/172 (46%), Gaps = 23/172 (13%)

Query: 39  LDVSGNLLESLPKTIENCRSLEEL------------------NANFNKLRQLP-DTIGFE 79
           LD+SG  L  LP  I   + LE L                    + N L+ LP + +G  
Sbjct: 21  LDLSGQELTELPGEIGKLQQLESLILGKKLEGYERVGSRILEKVSGNNLKTLPLELLG-- 78

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+ L I+ N +  +P  +T +  L  L      L  +PE + NL NL  L  + N  
Sbjct: 79  LPNLRKLDISGNPLESIPDVVTQILHLEELILIRVELTEIPEAIANLSNLTQLYFNSN-- 136

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           ++  +P  I  L +L EL VS NKIT +P++I  L  L++L +  N +   P
Sbjct: 137 HISKIPELIAKLSNLRELHVSSNKITEIPEAIAKLSNLRELHVSSNQITEIP 188


>gi|383422865|gb|AFH34646.1| malignant fibrous histiocytoma-amplified sequence 1 [Macaca
           mulatta]
 gi|387540264|gb|AFJ70759.1| malignant fibrous histiocytoma-amplified sequence 1 [Macaca
           mulatta]
          Length = 1052

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 119/250 (47%), Gaps = 44/250 (17%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P  L A L  +  LDV  N+L  LP+S+ CLS+L+ LDV  N L + P+ +    +LEE
Sbjct: 150 LPAQLGA-LAQLEELDVSFNRLTHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEE 208

Query: 62  LNANFNKLRQLPDTI---------------------GF-ELINLKTLSINCNKIVILPQS 99
           L+ + N+LR LP+ I                     GF EL +L++L ++ N +  LP  
Sbjct: 209 LDVSSNRLRGLPEDISALCALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQ 268

Query: 100 LTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNF--------------------- 138
            + L  L++L+   N L+  P  L  L  LE L +S+N                      
Sbjct: 269 FSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDN 328

Query: 139 QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQG 198
             +  LP SI  L  L EL +  N+I  LPD+ G L ++    ++ NPL+ PP +V  +G
Sbjct: 329 NRIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKG 388

Query: 199 LSAVKGYLSE 208
           +  +  Y  E
Sbjct: 389 IPYIAAYQKE 398



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 92/171 (53%), Gaps = 4/171 (2%)

Query: 16  LDVHSNQLKCL-PNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           LDV  N+L  L    +  L +L+ L++S N L +LP  +     LEEL+ +FN+L  LPD
Sbjct: 116 LDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAQLEELDVSFNRLTHLPD 175

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
           ++   L  L+TL ++ N++   P+ L  L +L  LD   N L+ LPED+  L  L++L +
Sbjct: 176 SLSC-LSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALCALKILWL 234

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           S     L TLP     L SL  L +  N +  LP     L++L+ L+L  N
Sbjct: 235 SG--AELGTLPAGFCELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSN 283



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 80/146 (54%), Gaps = 8/146 (5%)

Query: 55  NCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLT----HLTSLRVLD 110
           N   +E LN   N L ++P+ +G  L +L+ L +  N+   LP ++     HLT L V  
Sbjct: 61  NLGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSH 120

Query: 111 ARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDS 170
            RL  L +  E +  L  L  LN+S N   L  LP  +G L  L ELDVS+N++T LPDS
Sbjct: 121 NRLTALGA--EVVSALRELRKLNLSHN--QLPALPAQLGALAQLEELDVSFNRLTHLPDS 176

Query: 171 IGCLRKLQKLSLEGNPLVSPPMDVVE 196
           + CL +L+ L ++ N L + P  +++
Sbjct: 177 LSCLSRLRTLDVDHNQLTAFPRQLLQ 202


>gi|45657380|ref|YP_001466.1| hypothetical protein LIC11505 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421087857|ref|ZP_15548692.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102412|ref|ZP_15563016.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45600619|gb|AAS70103.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367526|gb|EKP22910.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410429598|gb|EKP73974.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 572

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/186 (38%), Positives = 104/186 (55%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  LD+  NQL   P  I  L KL+ LD+S N L  LP  I   ++L+EL    NK
Sbjct: 69  QLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNK 128

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L   P  IG +L NL+ L ++ N++  LP+ +  L +L+ LD + N    LP+++  L N
Sbjct: 129 LTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQN 187

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ LN+  N   L TLP  IG L +L EL +  N++T LP  IG L+ LQ L    N L 
Sbjct: 188 LQTLNLQDN--QLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLT 245

Query: 189 SPPMDV 194
           + P ++
Sbjct: 246 ALPKEM 251



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 112/204 (54%), Gaps = 10/204 (4%)

Query: 25  CLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLK 84
            LP  I  L  LK L +  N L+++P  I   ++LE LN   N+L +LP  IG +L NL+
Sbjct: 367 TLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIG-QLRNLQ 425

Query: 85  TLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
            LS++ N + I P  +  L  L+ LD  +N   + P+++  L NL+ LN+ +N   L  L
Sbjct: 426 RLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN--QLTNL 483

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGLSAVK 203
              IG L +L ELD++ N+ T LP  IG L+KLQ L L  N L + P ++ + Q L  + 
Sbjct: 484 TAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWL- 542

Query: 204 GYLSEKMNNDHKSPKKKSWVGKLV 227
            YL     N+  S K++  + KL+
Sbjct: 543 -YLQ----NNQLSLKEQERIRKLL 561



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 101/179 (56%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  N+L  LPN IG L  L+ L +  N L + PK I   ++L++L  + N+L  LP  
Sbjct: 99  LDLSENRLVMLPNEIGRLQNLQELGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKE 158

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL+TL +  N+  ILP+ +  L +L+ L+ + N L +LP ++  L NL+ L + 
Sbjct: 159 IG-QLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLR 217

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L  LP  IG L +L  L    N++T LP  +G L+ LQ L+L  N L   P ++
Sbjct: 218 NN--RLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEI 274



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 105/187 (56%), Gaps = 4/187 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+P  +  RL N+  L ++ N+L   P  IG L  L+ L +S N L +LPK I   ++L+
Sbjct: 108 MLPNEI-GRLQNLQELGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQ 166

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   N+   LP  IG +L NL+TL++  N++  LP  +  L +L+ L  R N L  LP
Sbjct: 167 TLDLQNNQFTILPKEIG-QLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLP 225

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++  L NL+ L   +N   L  LP  +G L +L  L++  N++T LP  IG L+ LQ L
Sbjct: 226 KEIGQLQNLQTLCSPEN--RLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDL 283

Query: 181 SLEGNPL 187
            L  NPL
Sbjct: 284 ELLMNPL 290



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 101/184 (54%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           LNV VLD+       LP  I  L  L+ LD+  N L + P  I   + LE L+ + N+L 
Sbjct: 48  LNVRVLDLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLV 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ IG  L NL+ L +  NK+   P+ +  L +L+ L    N L +LP+++  L NL+
Sbjct: 108 MLPNEIG-RLQNLQELGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++ QN Q+   LP  IG L +L  L++  N++ TLP  IG L+ LQ+L L  N L   
Sbjct: 167 TLDL-QNNQF-TILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVL 224

Query: 191 PMDV 194
           P ++
Sbjct: 225 PKEI 228



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 101/180 (56%), Gaps = 3/180 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +RL N+  L +  N LK +P+ IG L  L+ L++  N LE LPK I   R+L+ L+ + N
Sbjct: 373 SRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQRLSLHQN 432

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+  P  I  +L  L+ L ++ N+    P+ +  L +L+ L+ + N L +L  ++  L 
Sbjct: 433 TLKIFPAEIE-QLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQ 491

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L+++ N      LP  IG L  L  LD+  N++TTLP  IG L+ LQ L L+ N L
Sbjct: 492 NLQELDLNDN--QFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQL 549



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 98/238 (41%), Gaps = 53/238 (22%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L    N+L  LP  +G L  L+ L++  N L  LPK I   ++L++L    N
Sbjct: 229 GQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMN 288

Query: 68  KL---------RQLPDT------------------------------------------I 76
            L         +  PD+                                          +
Sbjct: 289 PLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKV 348

Query: 77  GFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQ 136
             +  NL+ L +       LP+ ++ L +L+ L   LN LK++P ++  L NLE LN+  
Sbjct: 349 ILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEA 408

Query: 137 NFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           N   LE LP  IG L +L  L +  N +   P  I  L+KLQKL L  N   + P ++
Sbjct: 409 N--ELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEI 464



 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 65/114 (57%), Gaps = 5/114 (4%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +  ++RVLD       +LP+++E L NL+ L++  N   L T P  I  L  L 
Sbjct: 40  LTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQELDLRDN--QLATFPAVIVELQKLE 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGLSAVKGYLSE 208
            LD+S N++  LP+ IG L+ LQ+L L  N L + P ++ + Q L   K +LSE
Sbjct: 98  SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLTTFPKEIGQLQNLQ--KLWLSE 149


>gi|255089435|ref|XP_002506639.1| predicted protein [Micromonas sp. RCC299]
 gi|226521912|gb|ACO67897.1| predicted protein [Micromonas sp. RCC299]
          Length = 392

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 114/204 (55%), Gaps = 7/204 (3%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLP-KTIENCRSLE 60
           +PE ++  L ++  L +  N+L  +P  IG L+ LK L ++ N LE LP K I    SL 
Sbjct: 83  LPEGISG-LTSLTDLFLSDNKLTSVPAEIGQLASLKDLRITNNELEDLPGKIIGRLTSLT 141

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            LN + N+L  +P  IG  L +L  L ++ NK+  +P  +  LTSL VL    N L S+P
Sbjct: 142 GLNLSDNRLTSVPAEIG-RLTSLTGLGLDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVP 200

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L +L  L +S N   L ++P  IG L SL  L +  NK+T++P  IG L  L  L
Sbjct: 201 AEIGRLTSLTYLRLSGN--KLTSVPAEIGRLTSLTGLGLDGNKLTSVPAEIGRLTSLTVL 258

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKG 204
            L+GN L S P ++ +  L+A++G
Sbjct: 259 RLDGNRLTSVPAEIGQ--LTALEG 280



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 101/187 (54%), Gaps = 2/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL  +  L++ +N+L  LP  I  L+ L  L +S N L S+P  I    SL++L    N
Sbjct: 65  GRLNALWGLNLRNNELTELPEGISGLTSLTDLFLSDNKLTSVPAEIGQLASLKDLRITNN 124

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I   L +L  L+++ N++  +P  +  LTSL  L    N L S+P ++  L 
Sbjct: 125 ELEDLPGKIIGRLTSLTGLNLSDNRLTSVPAEIGRLTSLTGLGLDGNKLTSVPAEIGRLT 184

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L VL +  N   L ++P  IG L SL  L +S NK+T++P  IG L  L  L L+GN L
Sbjct: 185 SLTVLRLDGN--RLTSVPAEIGRLTSLTYLRLSGNKLTSVPAEIGRLTSLTGLGLDGNKL 242

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 243 TSVPAEI 249



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 101/193 (52%), Gaps = 3/193 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P  +  RL ++  L++  N+L  +P  IG L+ L  L + GN L S+P  I    SL  
Sbjct: 129 LPGKIIGRLTSLTGLNLSDNRLTSVPAEIGRLTSLTGLGLDGNKLTSVPAEIGRLTSLTV 188

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+L  +P  IG  L +L  L ++ NK+  +P  +  LTSL  L    N L S+P 
Sbjct: 189 LRLDGNRLTSVPAEIG-RLTSLTYLRLSGNKLTSVPAEIGRLTSLTGLGLDGNKLTSVPA 247

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L VL +  N   L ++P  IG L +L  L +  NK+T++P  IG L  L  L 
Sbjct: 248 EIGRLTSLTVLRLDGN--RLTSVPAEIGQLTALEGLFLDGNKLTSVPAEIGRLTSLHALF 305

Query: 182 LEGNPLVSPPMDV 194
           L  N L S P ++
Sbjct: 306 LSDNKLTSVPAEI 318



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 91/169 (53%), Gaps = 3/169 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL ++ VL +  N+L  +P  IG L+ L  L +SGN L S+P  I    SL  L  + N
Sbjct: 181 GRLTSLTVLRLDGNRLTSVPAEIGRLTSLTYLRLSGNKLTSVPAEIGRLTSLTGLGLDGN 240

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  +P  IG  L +L  L ++ N++  +P  +  LT+L  L    N L S+P ++  L 
Sbjct: 241 KLTSVPAEIG-RLTSLTVLRLDGNRLTSVPAEIGQLTALEGLFLDGNKLTSVPAEIGRLT 299

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           +L  L +S N   L ++P  IG L SL E  +  NK+T++P  I  LR+
Sbjct: 300 SLHALFLSDN--KLTSVPAEIGRLTSLREFTLHNNKLTSVPAEIWRLRE 346


>gi|432102123|gb|ELK29932.1| Translocation protein SEC62 [Myotis davidii]
          Length = 1240

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 120/236 (50%), Gaps = 36/236 (15%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V++D+  N+L  LP  IG L++L+   V+ N L+ LP+++  C  L  L+ ++N+L
Sbjct: 169 LRNLVIIDLDGNRLTALPEEIGKLTRLQKFYVARNSLQGLPESLSQCDQLSVLDLSYNRL 228

Query: 70  RQLPDTIGF-----ELINLKTLSINCNKIVILPQSLTHLTSLRVL---DARLNCLKSLPE 121
             LP ++G       L  LK L ++ N+ +  P+ +  L SL  L     +   L S+PE
Sbjct: 229 HSLPRSLGLPSDFGALSKLKILGLSGNQFISFPEEIFSLESLEKLYLGQDQGAKLTSVPE 288

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           D+  L +L+ L+I  N  +LE LP ++G + +L  LD  +N +  LPD+I   + L++L 
Sbjct: 289 DIGKLQSLKELHIENN--HLEYLPVALGSMPNLEVLDCRHNLLKQLPDAICQAQALRELL 346

Query: 182 LE-----------------------GNPLVSPPMDVVEQGLSAVKGYLSEKMNNDH 214
           LE                        NP+  PP +V  +G  A+  YL   MN  H
Sbjct: 347 LEKNLLTQLPENLDSLVNLDVLTLMDNPMEDPPKEVYTEGKEAIFTYL---MNKRH 399



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 114/223 (51%), Gaps = 33/223 (14%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGN-LLESLPKTIENCRSLE 60
           IPE +   L N+ VL +++N+L  L   +G LS+L+ LD+S N +L S    + + RSL 
Sbjct: 45  IPEDIQY-LANIKVLYLNNNRLSKLCLQLGKLSRLEGLDLSDNPILPSWVPVLSSIRSLR 103

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR------------- 107
           +L     ++ ++P  I   L +L+ L ++ N++  LP+ + + T LR             
Sbjct: 104 QLRLYRTQIGEIPTEICKHLHHLELLGLSGNRLKSLPKEIVNQTKLRELYLKQNQFEVFP 163

Query: 108 ----------VLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVEL 157
                     ++D   N L +LPE++  L  L+   +++N   L+ LP S+     L  L
Sbjct: 164 PELCVLRNLVIIDLDGNRLTALPEEIGKLTRLQKFYVARN--SLQGLPESLSQCDQLSVL 221

Query: 158 DVSYNKITTLPDSI------GCLRKLQKLSLEGNPLVSPPMDV 194
           D+SYN++ +LP S+      G L KL+ L L GN  +S P ++
Sbjct: 222 DLSYNRLHSLPRSLGLPSDFGALSKLKILGLSGNQFISFPEEI 264



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 91/209 (43%), Gaps = 51/209 (24%)

Query: 31  GCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINC 90
           G   +   LD +   L ++P  I   R LEE++   N++ ++P+ I + L N+K L +N 
Sbjct: 4   GTSGRTFFLDAANQNLATIPSGILELRELEEVHLENNQIEEIPEDIQY-LANIKVLYLNN 62

Query: 91  NKIV---------------------ILPQSLTHLTSLRVLDA-RL--------------- 113
           N++                      ILP  +  L+S+R L   RL               
Sbjct: 63  NRLSKLCLQLGKLSRLEGLDLSDNPILPSWVPVLSSIRSLRQLRLYRTQIGEIPTEICKH 122

Query: 114 -----------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYN 162
                      N LKSLP+++ N   L  L + QN    E  P  + +L +LV +D+  N
Sbjct: 123 LHHLELLGLSGNRLKSLPKEIVNQTKLRELYLKQN--QFEVFPPELCVLRNLVIIDLDGN 180

Query: 163 KITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           ++T LP+ IG L +LQK  +  N L   P
Sbjct: 181 RLTALPEEIGKLTRLQKFYVARNSLQGLP 209



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 2/99 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L ++  L + +N L+ LP ++G +  L+VLD   NLL+ LP  I   ++L E
Sbjct: 286 VPEDI-GKLQSLKELHIENNHLEYLPVALGSMPNLEVLDCRHNLLKQLPDAICQAQALRE 344

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSL 100
           L    N L QLP+ +   L+NL  L++  N +   P+ +
Sbjct: 345 LLLEKNLLTQLPENLD-SLVNLDVLTLMDNPMEDPPKEV 382


>gi|357627630|gb|EHJ77268.1| putative shoc2 [Danaus plexippus]
          Length = 567

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 109/182 (59%), Gaps = 3/182 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L ++V   ++ N+L  LP   GCL+ L+ L ++ N L SLP ++ + RSL+ L+   NKL
Sbjct: 108 LTHLVEFYLYGNKLVALPAEFGCLTNLQTLALNENSLTSLPDSLAHLRSLKVLDLRHNKL 167

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             +P+ + ++L +L TL +  N+I ++   + +LT+L +L  R N +K L   +  L+NL
Sbjct: 168 SDIPEVV-YKLTSLTTLFLRFNRIRVVGDGIANLTNLTMLSLRENKIKELSSGIGKLVNL 226

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
              ++S N  +LE LP  IG  ++L  LD+ +N++  +PD+IG L+ L ++ L  N L +
Sbjct: 227 VTFDVSHN--HLEHLPQEIGNCVNLSTLDLQHNELLDIPDTIGNLQALNRIGLRYNRLNA 284

Query: 190 PP 191
            P
Sbjct: 285 IP 286



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 104/198 (52%), Gaps = 25/198 (12%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+V L++ +NQL  LP+ I  L  L+VL +S NLL+ +P +I N R L  L+   NK+  
Sbjct: 389 NMVELNLGTNQLVKLPDDIQSLINLEVLILSNNLLKRIPPSIGNLRKLRVLDLEENKIEI 448

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ IGF L  LK L +  N++  LP+S+ HL +L  L    N L+ LPE++  L NLE 
Sbjct: 449 LPNEIGF-LQELKKLIVQSNQLTSLPRSIGHLINLTYLSVGENNLQYLPEEIGTLENLES 507

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L ++ N   L  LP+ + L +S                       LQ +S+E  PL S P
Sbjct: 508 LYLNDN-PNLCNLPFELALCVS-----------------------LQIMSIENCPLTSLP 543

Query: 192 MDVVEQGLSAVKGYLSEK 209
            DVV  G S V  YL  +
Sbjct: 544 PDVVSSGPSLVIQYLKSQ 561



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 112/232 (48%), Gaps = 50/232 (21%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           +N+  LD+  N+L  +P++IG L  L  + +  N L ++P ++ NC+ ++E N   N + 
Sbjct: 247 VNLSTLDLQHNELLDIPDTIGNLQALNRIGLRYNRLNAIPASLSNCKHMDEFNVEGNSIS 306

Query: 71  QLPDTIGFELINLKTLSI-----------------------------------------N 89
           QLPD +   L  L +L++                                         N
Sbjct: 307 QLPDGLLCSLTELTSLTLSRNSFMSYPSGGPAQFTSVSSINLEHNQIDKIPYGIFSRAKN 366

Query: 90  CNKIVI-------LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
             K+++       LP  +   T++  L+   N L  LP+D+++LINLEVL +S N   L+
Sbjct: 367 LTKLIMKENLLTSLPLDIGTWTNMVELNLGTNQLVKLPDDIQSLINLEVLILSNNL--LK 424

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            +P SIG L  L  LD+  NKI  LP+ IG L++L+KL ++ N L S P  +
Sbjct: 425 RIPPSIGNLRKLRVLDLEENKIEILPNEIGFLQELKKLIVQSNQLTSLPRSI 476



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 3/191 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++ E +  R   V  LD+  + +  LP ++  L+ L    + GN L +LP       +L+
Sbjct: 76  VVREFIRCRDEGVKRLDLSKSSITSLPPNVRDLTHLVEFYLYGNKLVALPAEFGCLTNLQ 135

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L  N N L  LPD++   L +LK L +  NK+  +P+ +  LTSL  L  R N ++ + 
Sbjct: 136 TLALNENSLTSLPDSLA-HLRSLKVLDLRHNKLSDIPEVVYKLTSLTTLFLRFNRIRVVG 194

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           + + NL NL +L++ +N   ++ L   IG L++LV  DVS+N +  LP  IG    L  L
Sbjct: 195 DGIANLTNLTMLSLREN--KIKELSSGIGKLVNLVTFDVSHNHLEHLPQEIGNCVNLSTL 252

Query: 181 SLEGNPLVSPP 191
            L+ N L+  P
Sbjct: 253 DLQHNELLDIP 263



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 98/189 (51%), Gaps = 4/189 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A L N+ +L +  N++K L + IG L  L   DVS N LE LP+ I NC +L  L+   N
Sbjct: 198 ANLTNLTMLSLRENKIKELSSGIGKLVNLVTFDVSHNHLEHLPQEIGNCVNLSTLDLQHN 257

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLE-NL 126
           +L  +PDTIG  L  L  + +  N++  +P SL++   +   +   N +  LP+ L  +L
Sbjct: 258 ELLDIPDTIG-NLQALNRIGLRYNRLNAIPASLSNCKHMDEFNVEGNSISQLPDGLLCSL 316

Query: 127 INLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGN 185
             L  L +S+N  ++           S+  +++ +N+I  +P  I    K L KL ++ N
Sbjct: 317 TELTSLTLSRN-SFMSYPSGGPAQFTSVSSINLEHNQIDKIPYGIFSRAKNLTKLIMKEN 375

Query: 186 PLVSPPMDV 194
            L S P+D+
Sbjct: 376 LLTSLPLDI 384


>gi|255070553|ref|XP_002507358.1| predicted protein [Micromonas sp. RCC299]
 gi|226522633|gb|ACO68616.1| predicted protein [Micromonas sp. RCC299]
          Length = 574

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++ VLD+++NQL  +P  IG L+ L  L + GN L S+P  I    SL  L+ + N
Sbjct: 26  GQLTSLEVLDLYNNQLTSVPAEIGQLTSLTELYLFGNQLTSVPAEIGQLTSLTGLDLSGN 85

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  +G +L +L+ L +  N++  +P  +  LTSL  L    N L S+P ++  L 
Sbjct: 86  QLTSVPAEVG-QLTSLRELHLWNNRLTSVPAEIGQLTSLEELCLDDNRLTSVPAEIGQLT 144

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +LE L +  N   L ++P  IG L SL EL++  N++T++P  IG L  L+KL+L GN L
Sbjct: 145 SLERLYLGGN--QLTSVPAEIGRLTSLEELNLKSNQLTSVPAEIGQLASLEKLNLNGNQL 202

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 203 TSVPAEI 209



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 106/187 (56%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL ++  L++ SNQL  +P  IG L+ L+ L+++GN L S+P  I    SL+EL+ N N
Sbjct: 164 GRLTSLEELNLKSNQLTSVPAEIGQLASLEKLNLNGNQLTSVPAEIGQLTSLKELDLNGN 223

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  IG +L +LK L +  N++  +P  +  L SL  L    N L S+P ++  L 
Sbjct: 224 QLTSVPADIG-QLTDLKELGLRDNQLTSVPAEIGQLASLEKLYVGGNQLTSVPAEIGQLT 282

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +LE L +  N   L ++P  I  L SL  L +  N++T++P  IG L  L +L L GN L
Sbjct: 283 SLEGLELDDN--QLTSVPAEIWQLTSLRVLYLDDNQLTSVPAEIGQLTSLTELYLSGNQL 340

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 341 TSVPAEI 347



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 101/177 (57%), Gaps = 3/177 (1%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           +  NQL  +P  IG L+ L+ L++  N L S+P  I    SLE+LN N N+L  +P  IG
Sbjct: 151 LGGNQLTSVPAEIGRLTSLEELNLKSNQLTSVPAEIGQLASLEKLNLNGNQLTSVPAEIG 210

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
            +L +LK L +N N++  +P  +  LT L+ L  R N L S+P ++  L +LE L +  N
Sbjct: 211 -QLTSLKELDLNGNQLTSVPADIGQLTDLKELGLRDNQLTSVPAEIGQLASLEKLYVGGN 269

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
              L ++P  IG L SL  L++  N++T++P  I  L  L+ L L+ N L S P ++
Sbjct: 270 --QLTSVPAEIGQLTSLEGLELDDNQLTSVPAEIWQLTSLRVLYLDDNQLTSVPAEI 324



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 98/179 (54%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L++  NQL  +P  I  L+ L+VL +  N L S+P  I    SL EL  + N+L  +P  
Sbjct: 287 LELDDNQLTSVPAEIWQLTSLRVLYLDDNQLTSVPAEIGQLTSLTELYLSGNQLTSVPAE 346

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L  LK L +  N++  +P+ +  LTSLRVL    N L  LP ++  L +LE L + 
Sbjct: 347 IG-RLTELKELGLRDNQLTSVPEEIWQLTSLRVLYLDDNLLDELPAEIGQLTSLEELGLE 405

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +N   L ++P  I  L SL EL +  N++T++P  IG L  L KL L G  L S P ++
Sbjct: 406 RN--ELTSVPAEIWQLTSLTELYLGCNQLTSVPAEIGQLTSLTKLYLSGTKLTSVPAEI 462



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 102/187 (54%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL  +  L +  NQL  +P  I  L+ L+VL +  NLL+ LP  I    SLEEL    N
Sbjct: 348 GRLTELKELGLRDNQLTSVPEEIWQLTSLRVLYLDDNLLDELPAEIGQLTSLEELGLERN 407

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  I ++L +L  L + CN++  +P  +  LTSL  L      L S+P ++  L 
Sbjct: 408 ELTSVPAEI-WQLTSLTELYLGCNQLTSVPAEIGQLTSLTKLYLSGTKLTSVPAEIGQLT 466

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L VL +  N   L +LP  IG L SL EL ++  ++T++P  IG L +L++L L  N L
Sbjct: 467 SLRVLYLYGN--QLTSLPAEIGQLASLRELYLNGKQLTSVPAEIGQLTELKELDLRDNKL 524

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 525 TSVPEEI 531



 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 101/179 (56%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  N+L  +P  IG L+ L+VLD+  N L S+P  I    SL EL    N+L  +P  
Sbjct: 11  LALDGNELTSVPAEIGQLTSLEVLDLYNNQLTSVPAEIGQLTSLTELYLFGNQLTSVPAE 70

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L +L  L ++ N++  +P  +  LTSLR L    N L S+P ++  L +LE L + 
Sbjct: 71  IG-QLTSLTGLDLSGNQLTSVPAEVGQLTSLRELHLWNNRLTSVPAEIGQLTSLEELCLD 129

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L ++P  IG L SL  L +  N++T++P  IG L  L++L+L+ N L S P ++
Sbjct: 130 DN--RLTSVPAEIGQLTSLERLYLGGNQLTSVPAEIGRLTSLEELNLKSNQLTSVPAEI 186



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 103/186 (55%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L ++ VL +  NQL  +P  IG L+ L  L +SGN L S+P  I     L+EL    N+
Sbjct: 303 QLTSLRVLYLDDNQLTSVPAEIGQLTSLTELYLSGNQLTSVPAEIGRLTELKELGLRDNQ 362

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  +P+ I ++L +L+ L ++ N +  LP  +  LTSL  L    N L S+P ++  L +
Sbjct: 363 LTSVPEEI-WQLTSLRVLYLDDNLLDELPAEIGQLTSLEELGLERNELTSVPAEIWQLTS 421

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L  L +  N   L ++P  IG L SL +L +S  K+T++P  IG L  L+ L L GN L 
Sbjct: 422 LTELYLGCN--QLTSVPAEIGQLTSLTKLYLSGTKLTSVPAEIGQLTSLRVLYLYGNQLT 479

Query: 189 SPPMDV 194
           S P ++
Sbjct: 480 SLPAEI 485



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 64/119 (53%), Gaps = 1/119 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++  L +   +L  +P  IG L+ L+VL + GN L SLP  I    SL EL  N  
Sbjct: 440 GQLTSLTKLYLSGTKLTSVPAEIGQLTSLRVLYLYGNQLTSLPAEIGQLASLRELYLNGK 499

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENL 126
           +L  +P  IG +L  LK L +  NK+  +P+ +  LTSLRVL    N L S+P  +  L
Sbjct: 500 QLTSVPAEIG-QLTELKELDLRDNKLTSVPEEIWQLTSLRVLYLDDNQLTSVPAAIREL 557


>gi|431907791|gb|ELK11398.1| Protein LAP2 [Pteropus alecto]
          Length = 1479

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 105/183 (57%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  L
Sbjct: 272 NRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIG-SL 330

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  Y
Sbjct: 331 KNVTTLKIDENQLMFLPDSIGGLISIEELDCSFNEVEALPSSVGQLTNIRTFAADHN--Y 388

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+ TLP+ +G + KL+ ++L  N L + P    + Q L
Sbjct: 389 LQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMEKLKVINLSDNRLKNLPFSFTKLQQL 448

Query: 200 SAV 202
           +A+
Sbjct: 449 TAM 451



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 105/187 (56%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL+ + +L++  NQLK LP ++  L++L+ LD+  N    +P+ +E    L+E   + N
Sbjct: 213 GRLIKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGN 272

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  IG  L  L  L ++ N I ++ + ++   +L+ L    N L+ LPE + +L 
Sbjct: 273 RLTFIPGFIG-SLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLK 331

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           N+  L I +N   L  LP SIG L+S+ ELD S+N++  LP S+G L  ++  + + N L
Sbjct: 332 NVTTLKIDEN--QLMFLPDSIGGLISIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYL 389

Query: 188 VSPPMDV 194
              P ++
Sbjct: 390 QQLPPEI 396



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 111/204 (54%), Gaps = 13/204 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 114 EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 173

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   L  L++L+ R N LK L
Sbjct: 174 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLIKLQILELRENQLKML 231

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 232 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTY 289

Query: 180 LSLEGNPLVSPPMDVVEQGLSAVK 203
           L +  N +     ++VE+G+SA +
Sbjct: 290 LDVSKNNI-----EMVEEGISACE 308



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 106/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 79  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 138

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 139 LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 197

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L+ L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 198 LYL--NDAFLEFLPANFGRLIKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 255

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 256 -EVLEQ-LSGLKEF 267



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 94/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+ E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 299 MVEEGISA-CENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMFLPDSIGGLISIE 357

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP ++G +L N++T + + N +  LP  +    ++ VL    N L++LP
Sbjct: 358 ELDCSFNEVEALPSSVG-QLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLP 416

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 417 EEMGDMEKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 457


>gi|397521140|ref|XP_003830661.1| PREDICTED: leucine-rich repeat-containing protein 7 [Pan paniscus]
          Length = 1537

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 108/184 (58%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP SIG L  L  LD+S N +E++   I  C +LE+
Sbjct: 199 LPEVLD-QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALED 257

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+QLPD+IG  L  L TL ++ N++ +LP ++ +L+ L   D   N L+SLP 
Sbjct: 258 LLLSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPS 316

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L + +NF  L  LP  IG   ++  + +  NK+  LP+ IG ++KL+ L+
Sbjct: 317 TIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLN 374

Query: 182 LEGN 185
           L  N
Sbjct: 375 LSDN 378



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 108/233 (46%), Gaps = 50/233 (21%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP +I  L  LK LD+S N ++  P+ I+ C+ L 
Sbjct: 59  EELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   L  LR+L+ R N LK+L
Sbjct: 119 IIEASVNPISKLPD--GFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTL 176

Query: 120 PEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELD 158
           P+ +  L  LE L++  N                        L+ LP SIG L  LV LD
Sbjct: 177 PKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD 236

Query: 159 VSYNKITT-----------------------LPDSIGCLRKLQKLSLEGNPLV 188
           +S N+I T                       LPDSIG L+KL  L ++ N L 
Sbjct: 237 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLT 289



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP+SIG L KL  L V  N L  LP TI N   LEE + + N+L  LP TIG+ 
Sbjct: 262 SNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGY- 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+TL+++ N +  LP+ +    ++ V+  R N L+ LPE++  +  L VLN+S N  
Sbjct: 321 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+ LP+S   L  L  L +S N+   L
Sbjct: 379 RLKNLPFSFTKLKELAALWLSDNQSKAL 406



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 69  LRQLP-DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P +   FE   L+ L ++ N+I  LP+ L +  +LR L    N L +LP  + +L+
Sbjct: 34  LQQVPKEVFNFERT-LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLV 92

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           NL+ L+IS+N   ++  P +I     L  ++ S N I+ LPD    L  L +L L
Sbjct: 93  NLKELDISKNG--VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYL 145



 Score = 41.2 bits (95), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 38/61 (62%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP  IG + KL+VL++S N L++LP +    + L  L  + N+ + 
Sbjct: 346 NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKA 405

Query: 72  L 72
           L
Sbjct: 406 L 406


>gi|441637621|ref|XP_003260231.2| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 7 [Nomascus leucogenys]
          Length = 1578

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 108/184 (58%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP SIG L  L  LD+S N +E++   I  C +LE+
Sbjct: 237 LPEVLD-QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALED 295

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+QLPD+IG  L  L TL ++ N++ +LP ++ +L+ L   D   N L+SLP 
Sbjct: 296 LLLSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPS 354

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L + +NF  L  LP  IG   ++  + +  NK+  LP+ IG ++KL+ L+
Sbjct: 355 TIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLN 412

Query: 182 LEGN 185
           L  N
Sbjct: 413 LSDN 416



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 108/233 (46%), Gaps = 50/233 (21%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP +I  L  LK LD+S N ++  P+ I+ C+ L 
Sbjct: 97  EELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLT 156

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   L  LR+L+ R N LK+L
Sbjct: 157 IIEASVNPISKLPD--GFTQLLNLTQLYLNDAFLEFLPANFGRLAKLRILELRENHLKTL 214

Query: 120 PEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELD 158
           P+ +  L  LE L++  N                        L+ LP SIG L  LV LD
Sbjct: 215 PKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD 274

Query: 159 VSYNKITT-----------------------LPDSIGCLRKLQKLSLEGNPLV 188
           +S N+I T                       LPDSIG L+KL  L ++ N L 
Sbjct: 275 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLT 327



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 110/193 (56%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +LLN+  L ++   L+ LP + G L+KL++L++  N L++LPK++     LE 
Sbjct: 168 LPDGFT-QLLNLTQLYLNDAFLEFLPANFGRLAKLRILELRENHLKTLPKSMHKLAQLER 226

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+  +LP+ +  ++ NL+ L ++ N + +LP S+  L  L  LD   N ++++  
Sbjct: 227 LDLGNNEFGELPEVLD-QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDM 285

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           D+     LE L +S N   L+ LP SIGLL  L  L V  N++T LP++IG L  L++  
Sbjct: 286 DISGCEALEDLLLSSNM--LQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFD 343

Query: 182 LEGNPLVSPPMDV 194
              N L S P  +
Sbjct: 344 CSCNELESLPSTI 356



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP+SIG L KL  L V  N L  LP TI N   LEE + + N+L  LP TIG+ 
Sbjct: 300 SNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGY- 358

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+TL+++ N +  LP+ +    ++ V+  R N L+ LPE++  +  L VLN+S N  
Sbjct: 359 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDN-- 416

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+ LP+S   L  L  L +S N+   L
Sbjct: 417 RLKNLPFSFTKLKELAALWLSDNQSKAL 444



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 69  LRQLP-DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P +   FE   L+ L ++ N+I  LP+ L +  +LR L    N L +LP  + +L+
Sbjct: 72  LQQVPKEVFNFERT-LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLV 130

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           NL+ L+IS+N   ++  P +I     L  ++ S N I+ LPD    L  L +L L
Sbjct: 131 NLKELDISKNG--VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYL 183



 Score = 41.2 bits (95), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 38/61 (62%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP  IG + KL+VL++S N L++LP +    + L  L  + N+ + 
Sbjct: 384 NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKA 443

Query: 72  L 72
           L
Sbjct: 444 L 444


>gi|385680266|ref|ZP_10054194.1| hypothetical protein AATC3_30263 [Amycolatopsis sp. ATCC 39116]
          Length = 229

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/182 (40%), Positives = 101/182 (55%), Gaps = 4/182 (2%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L  + N+L  LP+ +  L +L VL+++ N L S+P  +    SL  L+   N+L +LP  
Sbjct: 21  LSAYDNELTELPDELWDLDRLAVLNLAANRLTSIPAGLARLTSLHTLDLGHNQLTELPSE 80

Query: 76  IGFELINL-KTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
           +G +L NL + L ++ N++  LP SLT L  LR L A  N LKSLP DL  L  L  L +
Sbjct: 81  LG-DLPNLTEYLYLSDNRLTTLPDSLTRLGRLRYLSATDNGLKSLPSDLSGLRELRELRL 139

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            +N   L  LP SIG L  L EL +  N +T LP S+G LR L+ L L  N L + P  +
Sbjct: 140 YRND--LHELPDSIGELSKLRELHLRGNHLTELPASVGKLRDLRYLDLRENELRTLPDGL 197

Query: 195 VE 196
            E
Sbjct: 198 AE 199



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/124 (40%), Positives = 71/124 (57%), Gaps = 3/124 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
            N+L  LP+S+  L +L+ L  + N L+SLP  +   R L EL    N L +LPD+IG E
Sbjct: 95  DNRLTTLPDSLTRLGRLRYLSATDNGLKSLPSDLSGLRELRELRLYRNDLHELPDSIG-E 153

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L  L+ L +  N +  LP S+  L  LR LD R N L++LP+ L  L  L  L++  N +
Sbjct: 154 LSKLRELHLRGNHLTELPASVGKLRDLRYLDLRENELRTLPDGLAEL-PLVKLDLRWN-R 211

Query: 140 YLET 143
           +LET
Sbjct: 212 WLET 215



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 23/159 (14%)

Query: 58  SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK 117
            LE L+A  N+L +LPD + ++L  L  L++  N++  +P  L  LTSL  LD   N L 
Sbjct: 17  GLEYLSAYDNELTELPDEL-WDLDRLAVLNLAANRLTSIPAGLARLTSLHTLDLGHNQLT 75

Query: 118 SLPEDLENLINL-EVLNISQN--------------FQY-------LETLPYSIGLLMSLV 155
            LP +L +L NL E L +S N               +Y       L++LP  +  L  L 
Sbjct: 76  ELPSELGDLPNLTEYLYLSDNRLTTLPDSLTRLGRLRYLSATDNGLKSLPSDLSGLRELR 135

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           EL +  N +  LPDSIG L KL++L L GN L   P  V
Sbjct: 136 ELRLYRNDLHELPDSIGELSKLRELHLRGNHLTELPASV 174



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 77/147 (52%), Gaps = 9/147 (6%)

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           L+ LS   N++  LP  L  L  L VL+   N L S+P  L  L +L  L++  N   L 
Sbjct: 18  LEYLSAYDNELTELPDELWDLDRLAVLNLAANRLTSIPAGLARLTSLHTLDLGHN--QLT 75

Query: 143 TLPYSIGLLMSLVE-LDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSA 201
            LP  +G L +L E L +S N++TTLPDS+  L +L+ LS   N L S P D+   GL  
Sbjct: 76  ELPSELGDLPNLTEYLYLSDNRLTTLPDSLTRLGRLRYLSATDNGLKSLPSDL--SGLRE 133

Query: 202 VKGYLSEKMNNDHKSPKKKSWVGKLVK 228
           ++  L    N+ H+ P     +G+L K
Sbjct: 134 LR-ELRLYRNDLHELPDS---IGELSK 156



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 3/113 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+SLT RL  +  L    N LK LP+ +  L +L+ L +  N L  LP +I     L E
Sbjct: 101 LPDSLT-RLGRLRYLSATDNGLKSLPSDLSGLRELRELRLYRNDLHELPDSIGELSKLRE 159

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLN 114
           L+   N L +LP ++G +L +L+ L +  N++  LP  L  L  ++ LD R N
Sbjct: 160 LHLRGNHLTELPASVG-KLRDLRYLDLRENELRTLPDGLAELPLVK-LDLRWN 210



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 2/82 (2%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L ++ N L  LP+SIG LSKL+ L + GN L  LP ++   R L  L+   N+LR LPD 
Sbjct: 137 LRLYRNDLHELPDSIGELSKLRELHLRGNHLTELPASVGKLRDLRYLDLRENELRTLPD- 195

Query: 76  IGFELINLKTLSINCNKIVILP 97
            G   + L  L +  N+ +  P
Sbjct: 196 -GLAELPLVKLDLRWNRWLETP 216


>gi|334348870|ref|XP_001378202.2| PREDICTED: leucine-rich repeat and death domain-containing protein
           LOC401387-like [Monodelphis domestica]
          Length = 1009

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 120/217 (55%), Gaps = 6/217 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP S++  + ++ VL +  N+ +  P  +  L  L++LD+S N ++ +P  I N + +++
Sbjct: 593 IPSSIS-NMTSLQVLLLSDNKFEIFPQELCTLGNLQILDISENQVQFIPSEISNLQVIQK 651

Query: 62  LNANFNKLRQLPDTIG--FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
           L+ + N+    P+ +     L  LK    N  K+  + + LT+L  L++LD   N +K +
Sbjct: 652 LDISSNRFESFPNELCQLSTLTELKLCQKNGWKLNQVSEELTNLIHLKILDISHNNIKEI 711

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+++  L  L   N S N   +  LP S G L  L +LD+S N++TTLP ++  L  L++
Sbjct: 712 PKNIGELKRLATFNASNNL--IHILPPSFGSLNKLQQLDMSENRLTTLPTNLSSLPSLKE 769

Query: 180 LSLEGNPLVSPPMDVVE-QGLSAVKGYLSEKMNNDHK 215
           ++ +GNPL+ PP +V   + L+ +  YL +  + D K
Sbjct: 770 INFDGNPLIRPPPEVCRGKDLNVIGHYLEKADDRDEK 806



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/194 (35%), Positives = 116/194 (59%), Gaps = 4/194 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++ TA + N+ +L++ SNQ    PN +  LSKL  L +S N + SLPK I+  ++LE
Sbjct: 316 VLPQT-TANMKNLKILNLSSNQFSIFPNILCYLSKLVKLRISKNFISSLPKEIKQLKNLE 374

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL  + N+L  LP  I F LI L+ L +  NK+ IL  ++ +   L+ L    N LK+L 
Sbjct: 375 ELFLDHNQLTFLPVQI-FRLIKLRKLDLVHNKLDILSHNIENFKDLKALLLDNNLLKNLG 433

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++ +   LE L+++ NF  LE +P +I  L +L EL ++ NK+T L + I  L+ ++ L
Sbjct: 434 KEIYSCAQLEYLSLNDNF--LEKIPNNIYRLKNLRELHINRNKMTVLSEDISHLKYIRVL 491

Query: 181 SLEGNPLVSPPMDV 194
           +  GN +   P+++
Sbjct: 492 NFSGNIIKEVPVEL 505



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 107/219 (48%), Gaps = 47/219 (21%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRS---------- 58
           RL N+  L ++ N++  L   I  L  ++VL+ SGN+++ +P  ++NC            
Sbjct: 461 RLKNLRELHINRNKMTVLSEDISHLKYIRVLNFSGNIIKEVPVELKNCSQMRKVDLSFNK 520

Query: 59  -------------LEELNANFNKLRQLPDTIGF----------------------ELINL 83
                        LE LN N N+L ++P  + +                      +L NL
Sbjct: 521 IYSFPVGLCALSFLEYLNLNGNELSEIPVDLSYSKQLIHLELNQNDFAYFSHHICKLKNL 580

Query: 84  KTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLET 143
             L+++ NKI  +P S++++TSL+VL    N  +  P++L  L NL++L+IS+N   ++ 
Sbjct: 581 NFLNLSKNKIHHIPSSISNMTSLQVLLLSDNKFEIFPQELCTLGNLQILDISEN--QVQF 638

Query: 144 LPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           +P  I  L  + +LD+S N+  + P+ +  L  L +L L
Sbjct: 639 IPSEISNLQVIQKLDISSNRFESFPNELCQLSTLTELKL 677



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 99/209 (47%), Gaps = 49/209 (23%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIEN------------- 55
           +L N+  L +  NQL  LP  I  L KL+ LD+  N L+ L   IEN             
Sbjct: 369 QLKNLEELFLDHNQLTFLPVQIFRLIKLRKLDLVHNKLDILSHNIENFKDLKALLLDNNL 428

Query: 56  ----------CRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTS 105
                     C  LE L+ N N L ++P+ I + L NL+ L IN NK+ +L + ++HL  
Sbjct: 429 LKNLGKEIYSCAQLEYLSLNDNFLEKIPNNI-YRLKNLRELHINRNKMTVLSEDISHLKY 487

Query: 106 LRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
           +RVL+   N +K +P        +E+ N SQ                 + ++D+S+NKI 
Sbjct: 488 IRVLNFSGNIIKEVP--------VELKNCSQ-----------------MRKVDLSFNKIY 522

Query: 166 TLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           + P  +  L  L+ L+L GN L   P+D+
Sbjct: 523 SFPVGLCALSFLEYLNLNGNELSEIPVDL 551



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 86/185 (46%), Gaps = 26/185 (14%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           ++ + +L +  N+L  LP  I  L  L VL VS N L SLP  +                
Sbjct: 232 MVGLEILSMKENELIALPPEINMLCNLSVLSVSHNQLASLPAQLS--------------- 276

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
                    +L+ L+ L ++ N     P  L  LT L +L    N L+ LP+   N+ NL
Sbjct: 277 ---------QLVKLRQLFLDYNNFWEFPAILERLTMLELLSLSGNYLQVLPQTTANMKNL 327

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           ++LN+S N       P  +  L  LV+L +S N I++LP  I  L+ L++L L+ N L  
Sbjct: 328 KILNLSSN--QFSIFPNILCYLSKLVKLRISKNFISSLPKEIKQLKNLEELFLDHNQLTF 385

Query: 190 PPMDV 194
            P+ +
Sbjct: 386 LPVQI 390


>gi|418700552|ref|ZP_13261494.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410760453|gb|EKR26649.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 260

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/183 (38%), Positives = 106/183 (57%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V  LD+ +N+L  LP  IG L +L+ L +S N L++LPK IE  + L  L  + N+L  
Sbjct: 41  DVQTLDLSNNKLITLPKEIGQLKELEWLSLSKNQLKTLPKEIEQLQKLRYLYLSDNQLTT 100

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG+ L  L+ L ++ N++  LP+ + +L  L  L+   N L +LP+++  L  L+V
Sbjct: 101 LPKEIGY-LKELQELDLSRNQLTTLPKEIEYLKDLESLNLINNQLTTLPKEIGQLKELQV 159

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L++S N   L TLP  I  L  L EL +  N++T L   I  L+KLQKL L  N L + P
Sbjct: 160 LDLSNN--QLTTLPNEIEFLKRLQELYLRNNQLTALSKGIEYLKKLQKLDLSRNQLTTLP 217

Query: 192 MDV 194
            ++
Sbjct: 218 KEI 220



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/174 (38%), Positives = 102/174 (58%), Gaps = 3/174 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  NQLK LP  I  L KL+ L +S N L +LPK I   + L+EL+ + N+L  LP  
Sbjct: 68  LSLSKNQLKTLPKEIEQLQKLRYLYLSDNQLTTLPKEIGYLKELQELDLSRNQLTTLPKE 127

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           I + L +L++L++  N++  LP+ +  L  L+VLD   N L +LP ++E L  L+ L + 
Sbjct: 128 IEY-LKDLESLNLINNQLTTLPKEIGQLKELQVLDLSNNQLTTLPNEIEFLKRLQELYLR 186

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
            N   L  L   I  L  L +LD+S N++TTLP  I  L+KL++L L+  P++ 
Sbjct: 187 NN--QLTALSKGIEYLKKLQKLDLSRNQLTTLPKEIETLKKLEELFLDDIPVLK 238


>gi|365920060|ref|ZP_09444414.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
 gi|364578571|gb|EHM55771.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
          Length = 412

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/184 (39%), Positives = 109/184 (59%), Gaps = 3/184 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +    L  LP  IG L+ L+ LD++GN L +LP TI    +L++L+   N
Sbjct: 67  GQLSNLQELVLFWGDLTELPAEIGQLNNLQKLDLTGNQLNTLPATIGQLSNLQKLSLGDN 126

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +  N++ +LP ++  L +L+VL+ R N L +LP  +  L 
Sbjct: 127 QLVILPVAIG-QLGNLQELDLWHNQLTVLPATIGQLGNLQVLNLRENKLTTLPAGIGQLG 185

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++  N   L TLP  IG L +L EL +  +++TTLP  IG L  LQKL L G+ L
Sbjct: 186 NLQKLSLGSN--RLTTLPAEIGQLHNLQELILCEDQLTTLPVEIGQLGNLQKLYLLGHQL 243

Query: 188 VSPP 191
            + P
Sbjct: 244 AALP 247



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/177 (40%), Positives = 103/177 (58%), Gaps = 3/177 (1%)

Query: 22  QLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELI 81
           Q   LP  IG LS L+ L +    L  LP  I    +L++L+   N+L  LP TIG +L 
Sbjct: 58  QFALLPAEIGQLSNLQELVLFWGDLTELPAEIGQLNNLQKLDLTGNQLNTLPATIG-QLS 116

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ LS+  N++VILP ++  L +L+ LD   N L  LP  +  L NL+VLN+ +N   L
Sbjct: 117 NLQKLSLGDNQLVILPVAIGQLGNLQELDLWHNQLTVLPATIGQLGNLQVLNLREN--KL 174

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQG 198
            TLP  IG L +L +L +  N++TTLP  IG L  LQ+L L  + L + P+++ + G
Sbjct: 175 TTLPAGIGQLGNLQKLSLGSNRLTTLPAEIGQLHNLQELILCEDQLTTLPVEIGQLG 231



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 113/209 (54%), Gaps = 21/209 (10%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQL  LP +IG L  L+VL++  N L +LP  I    +L++L+   N
Sbjct: 136 GQLGNLQELDLWHNQLTVLPATIGQLGNLQVLNLRENKLTTLPAGIGQLGNLQKLSLGSN 195

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L NL+ L +  +++  LP  +  L +L+ L    + L +LP  +  L 
Sbjct: 196 RLTTLPAEIG-QLHNLQELILCEDQLTTLPVEIGQLGNLQKLYLLGHQLAALPNSIGQLS 254

Query: 128 NLEVLNISQNF-------------------QYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL+ + I  +                    + L TLP  IG L +L +LD+S N+IT LP
Sbjct: 255 NLQSITIDSHLLLELIDMVPHLPKLKYLSLRNLTTLPTKIGQLSNLQKLDLSDNQITALP 314

Query: 169 DSIGCLRKLQKLSLEGNPLVSPPMDVVEQ 197
           D+IG L  LQKL+L GN L + P DV+ Q
Sbjct: 315 DAIGQLSNLQKLNLSGNKLTALP-DVIGQ 342



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/181 (37%), Positives = 105/181 (58%), Gaps = 3/181 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQL  LP +IG LS L+ L +  N L  LP  I    +L+EL+   N
Sbjct: 90  GQLNNLQKLDLTGNQLNTLPATIGQLSNLQKLSLGDNQLVILPVAIGQLGNLQELDLWHN 149

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP TIG +L NL+ L++  NK+  LP  +  L +L+ L    N L +LP ++  L 
Sbjct: 150 QLTVLPATIG-QLGNLQVLNLRENKLTTLPAGIGQLGNLQKLSLGSNRLTTLPAEIGQLH 208

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L + ++   L TLP  IG L +L +L +  +++  LP+SIG L  LQ ++++ + L
Sbjct: 209 NLQELILCED--QLTTLPVEIGQLGNLQKLYLLGHQLAALPNSIGQLSNLQSITIDSHLL 266

Query: 188 V 188
           +
Sbjct: 267 L 267



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 108/184 (58%), Gaps = 5/184 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + SN+L  LP  IG L  L+ L +  + L +LP  I    +L++L    +
Sbjct: 182 GQLGNLQKLSLGSNRLTTLPAEIGQLHNLQELILCEDQLTTLPVEIGQLGNLQKLYLLGH 241

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP++IG +L NL++++I+ + ++ L   + HL  L+ L  R   L +LP  +  L 
Sbjct: 242 QLAALPNSIG-QLSNLQSITIDSHLLLELIDMVPHLPKLKYLSLR--NLTTLPTKIGQLS 298

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L++S N   +  LP +IG L +L +L++S NK+T LPD IG L  LQ+L L GN L
Sbjct: 299 NLQKLDLSDN--QITALPDAIGQLSNLQKLNLSGNKLTALPDVIGQLDNLQELDLSGNKL 356

Query: 188 VSPP 191
            + P
Sbjct: 357 ATLP 360



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 87/164 (53%), Gaps = 24/164 (14%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLL--------------------- 46
            +L N+  L +  +QL  LPNSIG LS L+ + +  +LL                     
Sbjct: 228 GQLGNLQKLYLLGHQLAALPNSIGQLSNLQSITIDSHLLLELIDMVPHLPKLKYLSLRNL 287

Query: 47  ESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSL 106
            +LP  I    +L++L+ + N++  LPD IG +L NL+ L+++ NK+  LP  +  L +L
Sbjct: 288 TTLPTKIGQLSNLQKLDLSDNQITALPDAIG-QLSNLQKLNLSGNKLTALPDVIGQLDNL 346

Query: 107 RVLDARLNCLKSLPEDLENLINLEVLNISQNF--QYLETLPYSI 148
           + LD   N L +LPE ++ L NL+++N+  N     L+ LP SI
Sbjct: 347 QELDLSGNKLATLPESIDQLHNLQIINLRDNMLGYNLDVLPNSI 390



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/104 (37%), Positives = 62/104 (59%), Gaps = 5/104 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQ+  LP++IG LS L+ L++SGN L +LP  I    +L+EL+ + N
Sbjct: 295 GQLSNLQKLDLSDNQITALPDAIGQLSNLQKLNLSGNKLTALPDVIGQLDNLQELDLSGN 354

Query: 68  KLRQLPDTI----GFELINLKTLSINCNKIVILPQSLTHLTSLR 107
           KL  LP++I      ++INL+   +  N + +LP S+  L   R
Sbjct: 355 KLATLPESIDQLHNLQIINLRDNMLGYN-LDVLPNSIQRLYHKR 397


>gi|295828952|gb|ADG38145.1| AT2G17440-like protein [Capsella grandiflora]
          Length = 162

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/164 (39%), Positives = 99/164 (60%), Gaps = 3/164 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+HSN++  LP SIG L  L  L++SGN L SLP        LEEL+ + N L  LP++
Sbjct: 2   LDLHSNRIGQLPESIGBLVYLVNLNLSGNQLSSLPPAFSRLIHLEELDLSSNSLSTLPES 61

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L++LK L +  N I  JP  ++  +SL+ L A  N LK+LPE +  L  LE+L + 
Sbjct: 62  IG-SLVSLKKLDVETNNIEEJPHXISGCSSLKELRABYNRLKALPEAVGKLSTLEILTV- 119

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
             +  +  LP ++  + +L ELDVS+N++ ++P+S+   + L K
Sbjct: 120 -RYNNIRQLPTTMSSMANLKELDVSFNELESVPESLCHAKTLVK 162



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 49/116 (42%), Positives = 75/116 (64%), Gaps = 1/116 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +RL+++  LD+ SN L  LP SIG L  LK LDV  N +E JP  I  C SL+EL AB+N
Sbjct: 40  SRLIHLEELDLSSNSLSTLPESIGSLVSLKKLDVETNNIEEJPHXISGCSSLKELRABYN 99

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDL 123
           +L+ LP+ +G +L  L+ L++  N I  LP +++ + +L+ LD   N L+S+PE L
Sbjct: 100 RLKALPEAVG-KLSTLEILTVRYNNIRQLPTTMSSMANLKELDVSFNELESVPESL 154



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 93/155 (60%), Gaps = 4/155 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+   L+ +V L++  NQL  LP +   L  L+ LD+S N L +LP++I +  SL++
Sbjct: 12  LPESI-GBLVYLVNLNLSGNQLSSLPPAFSRLIHLEELDLSSNSLSTLPESIGSLVSLKK 70

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N + +JP  I     +LK L  B N++  LP+++  L++L +L  R N ++ LP 
Sbjct: 71  LDVETNNIEEJPHXISG-CSSLKELRABYNRLKALPEAVGKLSTLEILTVRYNNIRQLPT 129

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVE 156
            + ++ NL+ L++S  F  LE++P S+    +LV+
Sbjct: 130 TMSSMANLKELDVS--FNELESVPESLCHAKTLVK 162



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 77/125 (61%), Gaps = 3/125 (2%)

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L+ + N++ QLP++IG +L+ L  L+++ N++  LP + + L  L  LD   N L +LP
Sbjct: 1   KLDLHSNRIGQLPESIG-BLVYLVNLNLSGNQLSSLPPAFSRLIHLEELDLSSNSLSTLP 59

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E + +L++L+ L++  N   +E JP+ I    SL EL   YN++  LP+++G L  L+ L
Sbjct: 60  ESIGSLVSLKKLDVETN--NIEEJPHXISGCSSLKELRABYNRLKALPEAVGKLSTLEIL 117

Query: 181 SLEGN 185
           ++  N
Sbjct: 118 TVRYN 122



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 4/95 (4%)

Query: 109 LDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           LD   N +  LPE + BL+ L  LN+S N   L +LP +   L+ L ELD+S N ++TLP
Sbjct: 2   LDLHSNRIGQLPESIGBLVYLVNLNLSGN--QLSSLPPAFSRLIHLEELDLSSNSLSTLP 59

Query: 169 DSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVK 203
           +SIG L  L+KL +E N +   P  +   G S++K
Sbjct: 60  ESIGSLVSLKKLDVETNNIEEJPHXI--SGCSSLK 92


>gi|16904383|ref|NP_065845.1| leucine-rich repeat-containing protein 7 [Homo sapiens]
 gi|114557139|ref|XP_513481.2| PREDICTED: leucine-rich repeat-containing protein 7 isoform 3 [Pan
           troglodytes]
 gi|426329990|ref|XP_004026012.1| PREDICTED: leucine-rich repeat-containing protein 7 [Gorilla
           gorilla gorilla]
 gi|50401129|sp|Q96NW7.1|LRRC7_HUMAN RecName: Full=Leucine-rich repeat-containing protein 7; AltName:
           Full=Densin-180; Short=Densin; AltName: Full=Protein
           LAP1
 gi|16755893|gb|AAL28133.1|AF434715_1 densin-180 [Homo sapiens]
 gi|119626867|gb|EAX06462.1| leucine rich repeat containing 7, isoform CRA_b [Homo sapiens]
          Length = 1537

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 108/184 (58%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP SIG L  L  LD+S N +E++   I  C +LE+
Sbjct: 199 LPEVLD-QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALED 257

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+QLPD+IG  L  L TL ++ N++ +LP ++ +L+ L   D   N L+SLP 
Sbjct: 258 LLLSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPS 316

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L + +NF  L  LP  IG   ++  + +  NK+  LP+ IG ++KL+ L+
Sbjct: 317 TIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLN 374

Query: 182 LEGN 185
           L  N
Sbjct: 375 LSDN 378



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 108/233 (46%), Gaps = 50/233 (21%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP +I  L  LK LD+S N ++  P+ I+ C+ L 
Sbjct: 59  EELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   L  LR+L+ R N LK+L
Sbjct: 119 IIEASVNPISKLPD--GFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTL 176

Query: 120 PEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELD 158
           P+ +  L  LE L++  N                        L+ LP SIG L  LV LD
Sbjct: 177 PKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD 236

Query: 159 VSYNKITT-----------------------LPDSIGCLRKLQKLSLEGNPLV 188
           +S N+I T                       LPDSIG L+KL  L ++ N L 
Sbjct: 237 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLT 289



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP+SIG L KL  L V  N L  LP TI N   LEE + + N+L  LP TIG+ 
Sbjct: 262 SNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGY- 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+TL+++ N +  LP+ +    ++ V+  R N L+ LPE++  +  L VLN+S N  
Sbjct: 321 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+ LP+S   L  L  L +S N+   L
Sbjct: 379 RLKNLPFSFTKLKELAALWLSDNQSKAL 406



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 69  LRQLP-DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P +   FE   L+ L ++ N+I  LP+ L +  +LR L    N L +LP  + +L+
Sbjct: 34  LQQVPKEVFNFERT-LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLV 92

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           NL+ L+IS+N   ++  P +I     L  ++ S N I+ LPD    L  L +L L
Sbjct: 93  NLKELDISKNG--VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYL 145



 Score = 41.2 bits (95), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 38/61 (62%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP  IG + KL+VL++S N L++LP +    + L  L  + N+ + 
Sbjct: 346 NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKA 405

Query: 72  L 72
           L
Sbjct: 406 L 406


>gi|395530453|ref|XP_003767309.1| PREDICTED: leucine-rich repeat-containing protein 40 [Sarcophilus
           harrisii]
          Length = 638

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 118/213 (55%), Gaps = 29/213 (13%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P S ++ L N++ L++ SNQ+K LP  I  + +LK LD + N L+++P  + +  SLE 
Sbjct: 225 LPVSFSS-LSNLMRLNLASNQMKDLPVEITRMKRLKHLDCTSNYLQTVPSELASMESLEL 283

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVIL-PQSLTHLTSLRVLDARLNCLKSLP 120
           L    NKLR LP+     L  LK L +  N+I +L P+ L HL S+ VLD R N LKS+P
Sbjct: 284 LYLRRNKLRFLPEFPSCLL--LKELHVGENQIEMLGPEHLRHLKSIHVLDLRDNKLKSIP 341

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           ++                         I LL +L  LD++ N I++LP ++G L +LQ L
Sbjct: 342 DE-------------------------ITLLQALERLDLTNNDISSLPHTLGNLPRLQFL 376

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNND 213
           +LEGNPL +   +++ +G   V  YL  K+ +D
Sbjct: 377 ALEGNPLRTIRRELLNKGTQEVLKYLRSKIKDD 409



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 3/177 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           +++  L + +N+L+ L + +  L  L +LD+  NLL SLP  I    +L++LN + NKL+
Sbjct: 118 IDLTKLIISNNKLQSLSDDLRLLPALTILDMHDNLLTSLPCAIGELENLQKLNVSHNKLK 177

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  +  +L NLK L +  N++  +P+    L  L  LD   N L +LP    +L NL 
Sbjct: 178 TLPQELT-KLRNLKGLFLQYNELTCVPEGFGQLHKLEDLDLSNNHLTALPVSFSSLSNLM 236

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LN++ N   ++ LP  I  +  L  LD + N + T+P  +  +  L+ L L  N L
Sbjct: 237 RLNLASN--QMKDLPVEITRMKRLKHLDCTSNYLQTVPSELASMESLELLYLRRNKL 291



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 94/162 (58%), Gaps = 3/162 (1%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           + +LD+H N L  LP +IG L  L+ L+VS N L++LP+ +   R+L+ L   +N+L  +
Sbjct: 143 LTILDMHDNLLTSLPCAIGELENLQKLNVSHNKLKTLPQELTKLRNLKGLFLQYNELTCV 202

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P+  G +L  L+ L ++ N +  LP S + L++L  L+   N +K LP ++  +  L+ L
Sbjct: 203 PEGFG-QLHKLEDLDLSNNHLTALPVSFSSLSNLMRLNLASNQMKDLPVEITRMKRLKHL 261

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCL 174
           + + N  YL+T+P  +  + SL  L +  NK+  LP+   CL
Sbjct: 262 DCTSN--YLQTVPSELASMESLELLYLRRNKLRFLPEFPSCL 301



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 26/203 (12%)

Query: 33  LSKLKVLDVSGNLLESLPKTIENCRS---LEELNANFNKLRQLPDTIGFELINLKTLSIN 89
           ++ LK+LD S      +P  I +      +  +N + N L ++P  I  EL  +  +++ 
Sbjct: 435 ITALKLLDYSDKQTTLIPDEIFDAVGNNVITSVNFSKNHLNEIPKRI-MELKAVCDINLG 493

Query: 90  CNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN-----------F 138
            NK+  +   L  L +L  LD R N L SLPE++E LI L+ +N+S N            
Sbjct: 494 FNKLSCVSAELGVLQNLAHLDIRNNLLTSLPEEMEALIKLQTINLSFNRFKTFPSVLYRV 553

Query: 139 QYLETL-----------PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           + LET+           P  +  +  L  LD+  N +  +P  +G    L+ L LEGNP 
Sbjct: 554 RSLETILLSNNQVGSVDPLQLKQMDKLATLDLQNNDLLHIPPELGNCVSLRALLLEGNPF 613

Query: 188 VSPPMDVVEQGLSAVKGYLSEKM 210
             P   ++ +G  AV  YL +++
Sbjct: 614 RIPRAAILAKGTEAVLEYLRDRI 636



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 65/115 (56%), Gaps = 2/115 (1%)

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
           +E I+L  L I+ NK+  L   L  L +L +LD   N L SLP  +  L NL+ LN+S N
Sbjct: 115 WEQIDLTKLIISNNKLQSLSDDLRLLPALTILDMHDNLLTSLPCAIGELENLQKLNVSHN 174

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
              L+TLP  +  L +L  L + YN++T +P+  G L KL+ L L  N L + P+
Sbjct: 175 --KLKTLPQELTKLRNLKGLFLQYNELTCVPEGFGQLHKLEDLDLSNNHLTALPV 227



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 65/118 (55%), Gaps = 2/118 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L C+   +G L  L  LD+  NLL SLP+ +E    L+ +N +FN+ +  P  + + +
Sbjct: 495 NKLSCVSAELGVLQNLAHLDIRNNLLTSLPEEMEALIKLQTINLSFNRFKTFPSVL-YRV 553

Query: 81  INLKTLSINCNKI-VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
            +L+T+ ++ N++  + P  L  +  L  LD + N L  +P +L N ++L  L +  N
Sbjct: 554 RSLETILLSNNQVGSVDPLQLKQMDKLATLDLQNNDLLHIPPELGNCVSLRALLLEGN 611



 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 101/200 (50%), Gaps = 19/200 (9%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +T  L  +  LD+ +N +  LP+++G L +L+ L + GN L ++ + + N  + E 
Sbjct: 340 IPDEITL-LQALERLDLTNNDISSLPHTLGNLPRLQFLALEGNPLRTIRRELLNKGTQEV 398

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSL---TH-LTSLRVLDARLNCLK 117
           L    +K++  P       +N    SI     + LP       H +T+L++LD       
Sbjct: 399 LKYLRSKIKDDP-------VNQNEASIET--AMTLPSQARVNAHTITALKLLDYSDKQTT 449

Query: 118 SLPEDLENLINLEVL---NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCL 174
            +P+++ + +   V+   N S+N  +L  +P  I  L ++ ++++ +NK++ +   +G L
Sbjct: 450 LIPDEIFDAVGNNVITSVNFSKN--HLNEIPKRIMELKAVCDINLGFNKLSCVSAELGVL 507

Query: 175 RKLQKLSLEGNPLVSPPMDV 194
           + L  L +  N L S P ++
Sbjct: 508 QNLAHLDIRNNLLTSLPEEM 527



 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 52/100 (52%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+  LD+ +N L  LP  +  L KL+ +++S N  ++ P  +   RSLE +  + N++
Sbjct: 507 LQNLAHLDIRNNLLTSLPEEMEALIKLQTINLSFNRFKTFPSVLYRVRSLETILLSNNQV 566

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
             +      ++  L TL +  N ++ +P  L +  SLR L
Sbjct: 567 GSVDPLQLKQMDKLATLDLQNNDLLHIPPELGNCVSLRAL 606


>gi|297278929|ref|XP_001097063.2| PREDICTED: leucine-rich repeat-containing protein 7 isoform 1
           [Macaca mulatta]
          Length = 1575

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 108/184 (58%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP SIG L  L  LD+S N +E++   I  C +LE+
Sbjct: 237 LPEVLD-QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALED 295

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+QLPD+IG  L  L TL ++ N++ +LP ++ +L+ L   D   N L+SLP 
Sbjct: 296 LLLSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPS 354

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L + +NF  L  LP  IG   ++  + +  NK+  LP+ IG ++KL+ L+
Sbjct: 355 TIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLN 412

Query: 182 LEGN 185
           L  N
Sbjct: 413 LSDN 416



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP+SIG L KL  L V  N L  LP TI N   LEE + + N+L  LP TIG+ 
Sbjct: 300 SNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGY- 358

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+TL+++ N +  LP+ +    ++ V+  R N L+ LPE++  +  L VLN+S N  
Sbjct: 359 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDN-- 416

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+ LP+S   L  L  L +S N+   L
Sbjct: 417 RLKNLPFSFTKLKELAALWLSDNQSKAL 444



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 96/195 (49%), Gaps = 8/195 (4%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP +I  L  LK LD+S N ++  P+ I+ C+ L 
Sbjct: 97  EELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLT 156

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIV-ILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LP+  GF  +         +  +  LP +   L  LR+L+ R N LK+L
Sbjct: 157 IIEASVNPISKLPE--GFTQLLNLKKLYLNDAFLEFLPANFGRLVKLRILELRENHLKTL 214

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N      LP  +  + +L EL +  N +  LP SIG L+ L  
Sbjct: 215 PKSMHKLAQLERLDLGNN--EFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVY 272

Query: 180 LSLEGNPLVSPPMDV 194
           L +  N + +  MD+
Sbjct: 273 LDMSKNRIETVDMDI 287



 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 58/104 (55%), Gaps = 4/104 (3%)

Query: 69  LRQLP-DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P +   FE   L+ L ++ N+I  LP+ L +  +LR L    N L +LP  + +L+
Sbjct: 72  LQQVPKEVFNFERT-LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLV 130

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           NL+ L+IS+N   ++  P +I     L  ++ S N I+ LP+  
Sbjct: 131 NLKELDISKNG--VQEFPENIKCCKCLTIIEASVNPISKLPEGF 172



 Score = 41.2 bits (95), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 38/61 (62%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP  IG + KL+VL++S N L++LP +    + L  L  + N+ + 
Sbjct: 384 NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKA 443

Query: 72  L 72
           L
Sbjct: 444 L 444


>gi|301780908|ref|XP_002925871.1| PREDICTED: leucine-rich repeat-containing protein 7-like
           [Ailuropoda melanoleuca]
          Length = 1545

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 108/184 (58%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP SIG L  L  LD+S N +E++   I  C +LE+
Sbjct: 207 LPEVLD-QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALED 265

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+QLPD+IG  L  L TL ++ N++ +LP ++ +L+ L   D   N L+SLP 
Sbjct: 266 LLLSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPS 324

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L + +NF  L  LP  IG   ++  + +  NK+  LP+ IG ++KL+ L+
Sbjct: 325 TIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLN 382

Query: 182 LEGN 185
           L  N
Sbjct: 383 LSDN 386



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 108/233 (46%), Gaps = 50/233 (21%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP +I  L  LK LD+S N ++  P+ I+ C+ L 
Sbjct: 67  EELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLT 126

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   L  LR+L+ R N LK+L
Sbjct: 127 IIEASVNPISKLPD--GFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTL 184

Query: 120 PEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELD 158
           P+ +  L  LE L++  N                        L+ LP SIG L  LV LD
Sbjct: 185 PKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD 244

Query: 159 VSYNKITT-----------------------LPDSIGCLRKLQKLSLEGNPLV 188
           +S N+I T                       LPDSIG L+KL  L ++ N L 
Sbjct: 245 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLT 297



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP+SIG L KL  L V  N L  LP TI N   LEE + + N+L  LP TIG+ 
Sbjct: 270 SNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGY- 328

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+TL+++ N +  LP+ +    ++ V+  R N L+ LPE++  +  L VLN+S N  
Sbjct: 329 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDN-- 386

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+ LP+S   L  L  L +S N+   L
Sbjct: 387 RLKNLPFSFTKLKELAALWLSDNQSKAL 414



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 69  LRQLP-DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P +   FE   L+ L ++ N+I  LP+ L +  +LR L    N L +LP  + +L+
Sbjct: 42  LQQVPKEVFNFERT-LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLV 100

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           NL+ L+IS+N   ++  P +I     L  ++ S N I+ LPD    L  L +L L
Sbjct: 101 NLKELDISKNG--VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYL 153



 Score = 41.2 bits (95), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 38/61 (62%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP  IG + KL+VL++S N L++LP +    + L  L  + N+ + 
Sbjct: 354 NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKA 413

Query: 72  L 72
           L
Sbjct: 414 L 414


>gi|395730377|ref|XP_002810755.2| PREDICTED: leucine-rich repeat-containing protein 7 [Pongo abelii]
          Length = 1537

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 108/184 (58%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP SIG L  L  LD+S N +E++   I  C +LE+
Sbjct: 199 LPEVLD-QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALED 257

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+QLPD+IG  L  L TL ++ N++ +LP ++ +L+ L   D   N L+SLP 
Sbjct: 258 LLLSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPS 316

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L + +NF  L  LP  IG   ++  + +  NK+  LP+ IG ++KL+ L+
Sbjct: 317 TIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLN 374

Query: 182 LEGN 185
           L  N
Sbjct: 375 LSDN 378



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 108/233 (46%), Gaps = 50/233 (21%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP +I  L  LK LD+S N ++  P+ I+ C+ L 
Sbjct: 59  EELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   L  LR+L+ R N LK+L
Sbjct: 119 IIEASVNPISKLPD--GFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTL 176

Query: 120 PEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELD 158
           P+ +  L  LE L++  N                        L+ LP SIG L  LV LD
Sbjct: 177 PKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD 236

Query: 159 VSYNKITT-----------------------LPDSIGCLRKLQKLSLEGNPLV 188
           +S N+I T                       LPDSIG L+KL  L ++ N L 
Sbjct: 237 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLT 289



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP+SIG L KL  L V  N L  LP TI N   LEE + + N+L  LP TIG+ 
Sbjct: 262 SNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGY- 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+TL+++ N +  LP+ +    ++ V+  R N L+ LPE++  +  L VLN+S N  
Sbjct: 321 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+ LP+S   L  L  L +S N+   L
Sbjct: 379 RLKNLPFSFTKLKELAALWLSDNQSKAL 406



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 69  LRQLP-DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P +   FE   L+ L ++ N+I  LP+ L +  +LR L    N L +LP  + +L+
Sbjct: 34  LQQVPKEVFNFERT-LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLV 92

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           NL+ L+IS+N   ++  P +I     L  ++ S N I+ LPD    L  L +L L
Sbjct: 93  NLKELDISKNG--VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYL 145



 Score = 41.2 bits (95), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 38/61 (62%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP  IG + KL+VL++S N L++LP +    + L  L  + N+ + 
Sbjct: 346 NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKA 405

Query: 72  L 72
           L
Sbjct: 406 L 406


>gi|417763567|ref|ZP_12411544.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417773413|ref|ZP_12421293.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418674344|ref|ZP_13235651.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409940386|gb|EKN86026.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410576802|gb|EKQ39804.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410578764|gb|EKQ46618.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 280

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 108/205 (52%), Gaps = 24/205 (11%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V  LD+ +NQL  LP  IG L +L+ L +S N L++LPK IE  + L  L  + N+L  
Sbjct: 38  DVQTLDLSNNQLITLPKEIGQLKELEWLSLSRNQLKTLPKEIEQLQKLRYLYLSDNQLTT 97

Query: 72  LPDTIGF----------------------ELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           LP  IG+                       L  L++L++  N++  LP+ +  L  L+VL
Sbjct: 98  LPKEIGYLKELQELDLSRNQLTTLPKEIETLKKLESLNLINNQLTTLPKEIGQLKELQVL 157

Query: 110 DARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPD 169
           D   N L +LP ++E L  L+ L +  N   L TLP  I  L  L  LD+S+N++T L  
Sbjct: 158 DLSNNQLTTLPNEIEFLKRLQELYLKNN--QLTTLPKGIVYLKELWLLDLSFNQLTALSK 215

Query: 170 SIGCLRKLQKLSLEGNPLVSPPMDV 194
            IG L+KLQKL L  N L + P ++
Sbjct: 216 EIGYLKKLQKLDLSRNQLTTLPKEI 240



 Score = 97.4 bits (241), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 101/173 (58%), Gaps = 3/173 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  NQL  LP  IG L +L+ LD+S N L +LPK IE  + LE LN   N+L  LP  
Sbjct: 88  LYLSDNQLTTLPKEIGYLKELQELDLSRNQLTTLPKEIETLKKLESLNLINNQLTTLPKE 147

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L  L+ L ++ N++  LP  +  L  L+ L  + N L +LP+ +  L  L +L++S
Sbjct: 148 IG-QLKELQVLDLSNNQLTTLPNEIEFLKRLQELYLKNNQLTTLPKGIVYLKELWLLDLS 206

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
             F  L  L   IG L  L +LD+S N++TTLP  I  L+KL++L L+  P++
Sbjct: 207 --FNQLTALSKEIGYLKKLQKLDLSRNQLTTLPKEIETLKKLEELFLDDIPVL 257



 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 31/48 (64%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEEL 62
           +LD+  NQL  L   IG L KL+ LD+S N L +LPK IE  + LEEL
Sbjct: 202 LLDLSFNQLTALSKEIGYLKKLQKLDLSRNQLTTLPKEIETLKKLEEL 249


>gi|426215730|ref|XP_004002122.1| PREDICTED: leucine-rich repeat-containing protein 7 [Ovis aries]
          Length = 1537

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 108/184 (58%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP SIG L  L  LD+S N +E++   I  C +LE+
Sbjct: 199 LPEVLD-QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALED 257

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+QLPD+IG  L  L TL ++ N++ +LP ++ +L+ L   D   N L+SLP 
Sbjct: 258 LLLSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPS 316

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L + +NF  L  LP  IG   ++  + +  NK+  LP+ IG ++KL+ L+
Sbjct: 317 TIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLN 374

Query: 182 LEGN 185
           L  N
Sbjct: 375 LSDN 378



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 108/233 (46%), Gaps = 50/233 (21%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP +I  L  LK LD+S N ++  P+ I+ C+ L 
Sbjct: 59  EELPKQLFNCQALKKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   L  LR+L+ R N LK+L
Sbjct: 119 IIEASVNPISKLPD--GFTQLLNLTQLYLNDAFLEFLPANFGRLAKLRILELRENHLKTL 176

Query: 120 PEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELD 158
           P+ +  L  LE L++  N                        L+ LP SIG L  LV LD
Sbjct: 177 PKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD 236

Query: 159 VSYNKITT-----------------------LPDSIGCLRKLQKLSLEGNPLV 188
           +S N+I T                       LPDSIG L+KL  L ++ N L 
Sbjct: 237 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLT 289



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 110/193 (56%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +LLN+  L ++   L+ LP + G L+KL++L++  N L++LPK++     LE 
Sbjct: 130 LPDGFT-QLLNLTQLYLNDAFLEFLPANFGRLAKLRILELRENHLKTLPKSMHKLAQLER 188

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+  +LP+ +  ++ NL+ L ++ N + +LP S+  L  L  LD   N ++++  
Sbjct: 189 LDLGNNEFSELPEVLD-QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDM 247

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           D+     LE L +S N   L+ LP SIGLL  L  L V  N++T LP++IG L  L++  
Sbjct: 248 DISGCEALEDLLLSSNM--LQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFD 305

Query: 182 LEGNPLVSPPMDV 194
              N L S P  +
Sbjct: 306 CSCNELESLPSTI 318



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP+SIG L KL  L V  N L  LP TI N   LEE + + N+L  LP TIG+ 
Sbjct: 262 SNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGY- 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+TL+++ N +  LP+ +    ++ V+  R N L+ LPE++  +  L VLN+S N  
Sbjct: 321 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+ LP+S   L  L  L +S N+   L
Sbjct: 379 RLKNLPFSFTKLKELAALWLSDNQSKAL 406



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 69  LRQLP-DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P +   FE   L+ L ++ N+I  LP+ L +  +L+ L    N L +LP  + +L+
Sbjct: 34  LQQVPKEVFNFERT-LEELYLDANQIEELPKQLFNCQALKKLSIPDNDLSNLPTTIASLV 92

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           NL+ L+IS+N   ++  P +I     L  ++ S N I+ LPD    L  L +L L
Sbjct: 93  NLKELDISKNG--VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYL 145



 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 38/61 (62%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP  IG + KL+VL++S N L++LP +    + L  L  + N+ + 
Sbjct: 346 NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKA 405

Query: 72  L 72
           L
Sbjct: 406 L 406


>gi|195056017|ref|XP_001994909.1| GH17496 [Drosophila grimshawi]
 gi|261277886|sp|B4JTV9.1|SUR8_DROGR RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|193892672|gb|EDV91538.1| GH17496 [Drosophila grimshawi]
          Length = 622

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 106/179 (59%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L ++SN++  LP  IGCL  L+ L ++ N L SLP+++++C  L+ L+   NKL ++P  
Sbjct: 169 LYLYSNKIGQLPTEIGCLVNLRNLALNENSLTSLPESLKHCTQLKVLDLRHNKLAEIPSV 228

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           I + L +L TL +  N+I  +   L  L +L +L  R N +K L   +  L+NL  L++S
Sbjct: 229 I-YRLRSLTTLYLRFNRITTVADDLRQLVNLTMLSLRENKIKELGSAIGALVNLTTLDVS 287

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N  +LE LP  IG  ++L  LD+ +N++  +PDSIG L+ L +L L  N L   P+ +
Sbjct: 288 HN--HLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGLRYNRLNCVPVSL 344



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 108/193 (55%), Gaps = 4/193 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L+N+  L ++ N L  LP S+   ++LKVLD+  N L  +P  I   RSL  L   FN++
Sbjct: 186 LVNLRNLALNENSLTSLPESLKHCTQLKVLDLRHNKLAEIPSVIYRLRSLTTLYLRFNRI 245

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             + D +  +L+NL  LS+  NKI  L  ++  L +L  LD   N L+ LPED+ N +NL
Sbjct: 246 TTVADDL-RQLVNLTMLSLRENKIKELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNL 304

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
             L++  N   L  +P SIG L SLV L + YN++  +P S+   + + + ++EGN +  
Sbjct: 305 SALDLQHN--ELLDIPDSIGNLKSLVRLGLRYNRLNCVPVSLKNCKSMDEFNVEGNGITQ 362

Query: 190 PPMDVVEQGLSAV 202
            P D +   LSA+
Sbjct: 363 LP-DGMLASLSAL 374



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 95/179 (53%), Gaps = 26/179 (14%)

Query: 36  LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           +K LD+S + +  LP T+  C  L EL    NK+ QLP  IG  L+NL+ L++N N +  
Sbjct: 143 IKRLDLSKSSITVLPNTVRECVHLTELYLYSNKIGQLPTEIGC-LVNLRNLALNENSLTS 201

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLP-----------------------EDLENLINLEVL 132
           LP+SL H T L+VLD R N L  +P                       +DL  L+NL +L
Sbjct: 202 LPESLKHCTQLKVLDLRHNKLAEIPSVIYRLRSLTTLYLRFNRITTVADDLRQLVNLTML 261

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           ++ +N   ++ L  +IG L++L  LDVS+N +  LP+ IG    L  L L+ N L+  P
Sbjct: 262 SLREN--KIKELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIP 318



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 97/161 (60%), Gaps = 2/161 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           +N+V L++ +N L+ LP+ I  L  L++L +S N+L+ +P TI N R L  L+   N++ 
Sbjct: 443 VNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIE 502

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG  L  L+ L +  N+I +LP+S+ HL++L  L    N L+ LPE++ +L +LE
Sbjct: 503 VLPHEIGL-LHELQRLILQTNQITMLPRSVGHLSNLTHLSVSENNLQFLPEEIGSLESLE 561

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
            L I+QN   LE LP+ + L  +L  L++    + T+P  I
Sbjct: 562 NLYINQN-PGLEKLPFELALCQNLKYLNIDKCPLGTIPPEI 601



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 110/206 (53%), Gaps = 4/206 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP  + +R   +  L++  N L  LP  +G    +  L+++ N L+ LP  I N ++LE 
Sbjct: 411 IPYGIFSRAKGLTKLNMKENMLTALPLDVGTWVNMVELNLATNALQKLPDDIMNLQNLEI 470

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+++P+TIG  L  L+ L +  N+I +LP  +  L  L+ L  + N +  LP 
Sbjct: 471 LILSNNMLKKIPNTIG-NLRKLRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPR 529

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYN-KITTLPDSIGCLRKLQKL 180
            + +L NL  L++S+N   L+ LP  IG L SL  L ++ N  +  LP  +   + L+ L
Sbjct: 530 SVGHLSNLTHLSVSEN--NLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQNLKYL 587

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYL 206
           +++  PL + P ++   G S V  +L
Sbjct: 588 NIDKCPLGTIPPEIQAGGPSLVLQWL 613



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 111/261 (42%), Gaps = 73/261 (27%)

Query: 5   SLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVS-----------GNL-------- 45
           S    L+N+  LDV  N L+ LP  IG    L  LD+            GNL        
Sbjct: 273 SAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGL 332

Query: 46  ----LESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ--- 98
               L  +P +++NC+S++E N   N + QLPD +   L  L +++++ N+    P    
Sbjct: 333 RYNRLNCVPVSLKNCKSMDEFNVEGNGITQLPDGMLASLSALTSITLSRNQFTSYPTGGP 392

Query: 99  ---------SLTH----------------LTSLRV--------------------LDARL 113
                    +L H                LT L +                    L+   
Sbjct: 393 AQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDVGTWVNMVELNLAT 452

Query: 114 NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGC 173
           N L+ LP+D+ NL NLE+L +S N   L+ +P +IG L  L  LD+  N+I  LP  IG 
Sbjct: 453 NALQKLPDDIMNLQNLEILILSNNM--LKKIPNTIGNLRKLRILDLEENRIEVLPHEIGL 510

Query: 174 LRKLQKLSLEGNPLVSPPMDV 194
           L +LQ+L L+ N +   P  V
Sbjct: 511 LHELQRLILQTNQITMLPRSV 531



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 103/188 (54%), Gaps = 4/188 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L+N+ +L +  N++K L ++IG L  L  LDVS N LE LP+ I NC +L  L+   N+
Sbjct: 254 QLVNLTMLSLRENKIKELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNE 313

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLI 127
           L  +PD+IG  L +L  L +  N++  +P SL +  S+   +   N +  LP+  L +L 
Sbjct: 314 LLDIPDSIG-NLKSLVRLGLRYNRLNCVPVSLKNCKSMDEFNVEGNGITQLPDGMLASLS 372

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNP 186
            L  + +S+N Q+            ++  +++ +N+I  +P  I    K L KL+++ N 
Sbjct: 373 ALTSITLSRN-QFTSYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENM 431

Query: 187 LVSPPMDV 194
           L + P+DV
Sbjct: 432 LTALPLDV 439


>gi|256090463|ref|XP_002581209.1| cell polarity protein; leucine-rich repeat protein; scribble
           complex protein [Schistosoma mansoni]
          Length = 1456

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/205 (36%), Positives = 108/205 (52%), Gaps = 24/205 (11%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           R+  + +L +  N+L  LP  IG  S L  LD+S N +  LP +I  C SL+ L+ + N 
Sbjct: 66  RMKRIRLLTLSDNELTRLPTGIGSFSNLVELDISRNDISELPASIRFCDSLQSLDVSNNP 125

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+ LP   GF +L NL+ L +N   I  LP+ +  L  L  L+ R NCLKS+P+   +LI
Sbjct: 126 LQSLP--AGFCQLRNLRVLCLNDISIAELPEEIGSLQLLEKLELRDNCLKSIPDSFADLI 183

Query: 128 NLEVLNISQN-FQ--------------------YLETLPYSIGLLMSLVELDVSYNKITT 166
           +LE L++  N FQ                     L +LP  +G L +L +LD+S N I+T
Sbjct: 184 HLEFLDLGANEFQELSPVIGQLSQLSELWIDDNELRSLPKELGNLGNLQQLDLSENLIST 243

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPP 191
           LP+SI  L  L  L+L  N +   P
Sbjct: 244 LPESISGLVSLSDLNLSQNSITHLP 268



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 106/191 (55%), Gaps = 5/191 (2%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           +  N+L+ LP  +G L  L+ LD+S NL+ +LP++I    SL +LN + N +  LP+ +G
Sbjct: 213 IDDNELRSLPKELGNLGNLQQLDLSENLISTLPESISGLVSLSDLNLSQNSITHLPNGLG 272

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
            +L  L  L +N N+++ +  ++ + +SL+ L    N L  LP  + NL+++  LN+ QN
Sbjct: 273 -DLDKLIILKLNQNRLLTVTPTIGNCSSLQELYLTENFLSKLPSSIGNLVSMFHLNVDQN 331

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQ 197
              L  LP  IG   SL  L +  N +  LPD IG   +L+ L + GN L   P  +   
Sbjct: 332 --QLTELPSEIGQCTSLNILSLRENNLHRLPDEIGNCTRLRVLDVSGNRLDRLPFSLSRC 389

Query: 198 GLSAVKGYLSE 208
            L+A+  +LS+
Sbjct: 390 SLTAL--WLSQ 398



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 109/193 (56%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+S  A L+++  LD+ +N+ + L   IG LS+L  L +  N L SLPK + N  +L++
Sbjct: 175 IPDSF-ADLIHLEFLDLGANEFQELSPVIGQLSQLSELWIDDNELRSLPKELGNLGNLQQ 233

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N +  LP++I   L++L  L+++ N I  LP  L  L  L +L    N L ++  
Sbjct: 234 LDLSENLISTLPESIS-GLVSLSDLNLSQNSITHLPNGLGDLDKLIILKLNQNRLLTVTP 292

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + N  +L+ L +++NF  L  LP SIG L+S+  L+V  N++T LP  IG    L  LS
Sbjct: 293 TIGNCSSLQELYLTENF--LSKLPSSIGNLVSMFHLNVDQNQLTELPSEIGQCTSLNILS 350

Query: 182 LEGNPLVSPPMDV 194
           L  N L   P ++
Sbjct: 351 LRENNLHRLPDEI 363



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/162 (36%), Positives = 97/162 (59%), Gaps = 5/162 (3%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES++  L+++  L++  N +  LPN +G L KL +L ++ N L ++  TI NC SL+E
Sbjct: 244 LPESISG-LVSLSDLNLSQNSITHLPNGLGDLDKLIILKLNQNRLLTVTPTIGNCSSLQE 302

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N L +LP +IG  L+++  L+++ N++  LP  +   TSL +L  R N L  LP+
Sbjct: 303 LYLTENFLSKLPSSIG-NLVSMFHLNVDQNQLTELPSEIGQCTSLNILSLRENNLHRLPD 361

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           ++ N   L VL++S N   L+ LP+S+    SL  L +S N+
Sbjct: 362 EIGNCTRLRVLDVSGN--RLDRLPFSLSRC-SLTALWLSQNQ 400



 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 71/161 (44%), Gaps = 19/161 (11%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPK-TIENCRSLEELNANFNKLRQLPDTIGFELI 81
            KCLP    C      +D   + LE +P   I N R+LEE   + N++++LP        
Sbjct: 2   FKCLPIIGPCGRHTDHIDRRHSKLEQVPDDVIRNFRTLEECRLDANQIKELPK------- 54

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
                    ++  I       +  +R+L    N L  LP  + +  NL  L+IS+N   +
Sbjct: 55  ---------HRASIXXXXFFRMKRIRLLTLSDNELTRLPTGIGSFSNLVELDISRN--DI 103

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
             LP SI    SL  LDVS N + +LP     LR L+ L L
Sbjct: 104 SELPASIRFCDSLQSLDVSNNPLQSLPAGFCQLRNLRVLCL 144


>gi|320103236|ref|YP_004178827.1| adenylate cyclase [Isosphaera pallida ATCC 43644]
 gi|319750518|gb|ADV62278.1| Adenylate cyclase [Isosphaera pallida ATCC 43644]
          Length = 278

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 113/204 (55%), Gaps = 5/204 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A+L  +  LD+ SNQL  LP  +  L  L VLD+  N L  LP        L  LN   N
Sbjct: 59  AKLTKLSELDLSSNQLTQLPAVVTRLHGLTVLDLHSNRLTQLPAEFGQLTKLIRLNLQGN 118

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +LR+LP  IG +L  L  L+++ NK+  LP  +  LT++  L  R N L+SLP ++  ++
Sbjct: 119 QLRRLPAEIG-KLTKLMELNLHHNKLEALPPEIGKLTAVVKLYLRQNRLRSLPPEIGKMV 177

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L  LN+  N   L +LP  IG L  LV+L+++ N++TTLP  IG L +L  L L  NPL
Sbjct: 178 ALCWLNLYNN--ELTSLPPEIGKLRQLVKLNLAANRLTTLPPEIGQLTRLGTLDLSHNPL 235

Query: 188 VSPPMDVVEQGLSAVKGYLSEKMN 211
              P  + +  LS ++  L++ ++
Sbjct: 236 EHLPPQLSQ--LSGLRQILADGLD 257



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 103/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            R + +  L +  N+L  LP+ +  L+KL  LD+S N L  LP  +     L  L+ + N
Sbjct: 36  GRCVKLTRLILRGNRLAELPSELAKLTKLSELDLSSNQLTQLPAVVTRLHGLTVLDLHSN 95

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L QLP   G +L  L  L++  N++  LP  +  LT L  L+   N L++LP ++  L 
Sbjct: 96  RLTQLPAEFG-QLTKLIRLNLQGNQLRRLPAEIGKLTKLMELNLHHNKLEALPPEIGKLT 154

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            +  L + QN   L +LP  IG +++L  L++  N++T+LP  IG LR+L KL+L  N L
Sbjct: 155 AVVKLYLRQN--RLRSLPPEIGKMVALCWLNLYNNELTSLPPEIGKLRQLVKLNLAANRL 212

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 213 TTLPPEI 219



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 96/189 (50%), Gaps = 3/189 (1%)

Query: 6   LTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNAN 65
           L A  L    LD+  N+L  +P  IG   KL  L + GN L  LP  +     L EL+ +
Sbjct: 11  LRAESLGSTSLDLGRNRLSRIPAEIGRCVKLTRLILRGNRLAELPSELAKLTKLSELDLS 70

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
            N+L QLP  +   L  L  L ++ N++  LP     LT L  L+ + N L+ LP ++  
Sbjct: 71  SNQLTQLPAVV-TRLHGLTVLDLHSNRLTQLPAEFGQLTKLIRLNLQGNQLRRLPAEIGK 129

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L  L  LN+  N   LE LP  IG L ++V+L +  N++ +LP  IG +  L  L+L  N
Sbjct: 130 LTKLMELNLHHN--KLEALPPEIGKLTAVVKLYLRQNRLRSLPPEIGKMVALCWLNLYNN 187

Query: 186 PLVSPPMDV 194
            L S P ++
Sbjct: 188 ELTSLPPEI 196


>gi|119626868|gb|EAX06463.1| leucine rich repeat containing 7, isoform CRA_c [Homo sapiens]
          Length = 1574

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 108/184 (58%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP SIG L  L  LD+S N +E++   I  C +LE+
Sbjct: 236 LPEVLD-QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALED 294

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+QLPD+IG  L  L TL ++ N++ +LP ++ +L+ L   D   N L+SLP 
Sbjct: 295 LLLSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPS 353

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L + +NF  L  LP  IG   ++  + +  NK+  LP+ IG ++KL+ L+
Sbjct: 354 TIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLN 411

Query: 182 LEGN 185
           L  N
Sbjct: 412 LSDN 415



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 108/233 (46%), Gaps = 50/233 (21%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP +I  L  LK LD+S N ++  P+ I+ C+ L 
Sbjct: 96  EELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLT 155

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   L  LR+L+ R N LK+L
Sbjct: 156 IIEASVNPISKLPD--GFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTL 213

Query: 120 PEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELD 158
           P+ +  L  LE L++  N                        L+ LP SIG L  LV LD
Sbjct: 214 PKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD 273

Query: 159 VSYNKITT-----------------------LPDSIGCLRKLQKLSLEGNPLV 188
           +S N+I T                       LPDSIG L+KL  L ++ N L 
Sbjct: 274 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLT 326



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP+SIG L KL  L V  N L  LP TI N   LEE + + N+L  LP TIG+ 
Sbjct: 299 SNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGY- 357

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+TL+++ N +  LP+ +    ++ V+  R N L+ LPE++  +  L VLN+S N  
Sbjct: 358 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDN-- 415

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+ LP+S   L  L  L +S N+   L
Sbjct: 416 RLKNLPFSFTKLKELAALWLSDNQSKAL 443



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 69  LRQLP-DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P +   FE   L+ L ++ N+I  LP+ L +  +LR L    N L +LP  + +L+
Sbjct: 71  LQQVPKEVFNFERT-LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLV 129

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           NL+ L+IS+N   ++  P +I     L  ++ S N I+ LPD    L  L +L L
Sbjct: 130 NLKELDISKNG--VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYL 182



 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 38/61 (62%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP  IG + KL+VL++S N L++LP +    + L  L  + N+ + 
Sbjct: 383 NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKA 442

Query: 72  L 72
           L
Sbjct: 443 L 443


>gi|344278808|ref|XP_003411184.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 7-like [Loxodonta africana]
          Length = 1540

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 108/184 (58%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP SIG L  L  LD+S N +E++   I  C +LE+
Sbjct: 199 LPEVLD-QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMEISGCEALED 257

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+QLPD+IG  L  L TL ++ N++ +LP ++ +L+ L   D   N L+SLP 
Sbjct: 258 LLLSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPS 316

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L + +NF  L  LP  IG   ++  + +  NK+  LP+ IG ++KL+ L+
Sbjct: 317 TVGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLN 374

Query: 182 LEGN 185
           L  N
Sbjct: 375 LSDN 378



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 108/233 (46%), Gaps = 50/233 (21%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP +I  L  LK LD+S N ++  P+ I+ C+ L 
Sbjct: 59  EELPKQLFNCQALRKLSIPDNDLSSLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   L  LR+L+ R N LK+L
Sbjct: 119 IIEASVNPISKLPD--GFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTL 176

Query: 120 PEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELD 158
           P+ +  L  LE L++  N                        L+ LP SIG L  LV LD
Sbjct: 177 PKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD 236

Query: 159 VSYNKITT-----------------------LPDSIGCLRKLQKLSLEGNPLV 188
           +S N+I T                       LPDSIG L+KL  L ++ N L 
Sbjct: 237 MSKNRIETVDMEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLT 289



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 59/148 (39%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP+SIG L KL  L V  N L  LP TI N   LEE + + N+L  LP T+G+ 
Sbjct: 262 SNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTVGY- 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+TL+++ N +  LP+ +    ++ V+  R N L+ LPE++  +  L VLN+S N  
Sbjct: 321 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+ LP+S   L  L  L +S N+   L
Sbjct: 379 RLKNLPFSFTKLKELAALWLSDNQSKAL 406



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 69  LRQLP-DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P +   FE   L+ L ++ N+I  LP+ L +  +LR L    N L SLP  + +L+
Sbjct: 34  LQQVPKEVFNFERT-LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTTIASLV 92

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           NL+ L+IS+N   ++  P +I     L  ++ S N I+ LPD    L  L +L L
Sbjct: 93  NLKELDISKNG--VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYL 145



 Score = 41.6 bits (96), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 38/61 (62%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP  IG + KL+VL++S N L++LP +    + L  L  + N+ + 
Sbjct: 346 NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKA 405

Query: 72  L 72
           L
Sbjct: 406 L 406


>gi|119626866|gb|EAX06461.1| leucine rich repeat containing 7, isoform CRA_a [Homo sapiens]
          Length = 1527

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 108/184 (58%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP SIG L  L  LD+S N +E++   I  C +LE+
Sbjct: 236 LPEVLD-QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALED 294

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+QLPD+IG  L  L TL ++ N++ +LP ++ +L+ L   D   N L+SLP 
Sbjct: 295 LLLSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPS 353

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L + +NF  L  LP  IG   ++  + +  NK+  LP+ IG ++KL+ L+
Sbjct: 354 TIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLN 411

Query: 182 LEGN 185
           L  N
Sbjct: 412 LSDN 415



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 108/233 (46%), Gaps = 50/233 (21%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP +I  L  LK LD+S N ++  P+ I+ C+ L 
Sbjct: 96  EELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLT 155

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   L  LR+L+ R N LK+L
Sbjct: 156 IIEASVNPISKLPD--GFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTL 213

Query: 120 PEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELD 158
           P+ +  L  LE L++  N                        L+ LP SIG L  LV LD
Sbjct: 214 PKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD 273

Query: 159 VSYNKITT-----------------------LPDSIGCLRKLQKLSLEGNPLV 188
           +S N+I T                       LPDSIG L+KL  L ++ N L 
Sbjct: 274 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLT 326



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP+SIG L KL  L V  N L  LP TI N   LEE + + N+L  LP TIG+ 
Sbjct: 299 SNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGY- 357

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+TL+++ N +  LP+ +    ++ V+  R N L+ LPE++  +  L VLN+S N  
Sbjct: 358 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDN-- 415

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+ LP+S   L  L  L +S N+   L
Sbjct: 416 RLKNLPFSFTKLKELAALWLSDNQSKAL 443



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 69  LRQLP-DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P +   FE   L+ L ++ N+I  LP+ L +  +LR L    N L +LP  + +L+
Sbjct: 71  LQQVPKEVFNFERT-LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLV 129

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           NL+ L+IS+N   ++  P +I     L  ++ S N I+ LPD    L  L +L L
Sbjct: 130 NLKELDISKNG--VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYL 182



 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 38/61 (62%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP  IG + KL+VL++S N L++LP +    + L  L  + N+ + 
Sbjct: 383 NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKA 442

Query: 72  L 72
           L
Sbjct: 443 L 443


>gi|92098125|gb|AAI15013.1| Erbb2 interacting protein [Homo sapiens]
          Length = 1371

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 106/184 (57%), Gaps = 4/184 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+ IG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPEPIG-S 274

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L NL       N  
Sbjct: 275 LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN-- 332

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QG 198
           YL+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 392

Query: 199 LSAV 202
           L+A+
Sbjct: 393 LTAM 396



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 110/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+S 
Sbjct: 235 LDVSKNNI-----EMVEEGIST 251



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPEPIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  L+  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 83/144 (57%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP  IG L  +  L +  N L  LP +I    S+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPEPIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL+T + + N +  LP  +    ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE + + L N+  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    +L 
Sbjct: 267 QLPEPIGS-LKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-SWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|312378308|gb|EFR24924.1| hypothetical protein AND_10185 [Anopheles darlingi]
          Length = 657

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 106/187 (56%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++L N+ VL ++   L  LP   GCLSKL  L++  NLL++LP++I     LE L+   N
Sbjct: 153 SQLRNLTVLGLNDMSLTSLPQDFGCLSKLVSLELRENLLKNLPESISQLTKLERLDLGDN 212

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           ++ +LP  +G+ L  L+ L ++ N++  LP  +  L  L  LD   N L+ LPE++  L 
Sbjct: 213 EIDELPSHLGY-LPALQELWLDHNQLQRLPPEIGLLKKLVCLDVSENRLEELPEEIGGLE 271

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L  L++SQN   LETLP  +  L +L  L +  N++ TL D+IGC   +Q+L L  N L
Sbjct: 272 CLTDLHLSQNL--LETLPGGVARLTNLSILKLDQNRLHTLHDTIGCCVNMQELILTENFL 329

Query: 188 VSPPMDV 194
              P  +
Sbjct: 330 AELPASI 336



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 92/186 (49%), Gaps = 3/186 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
            +N+V LDV  N++  +P  I  L  L++ D S N +  LP      R+L  L  N   L
Sbjct: 109 FVNLVELDVSRNEIGDIPEDIRHLRSLQIADFSSNPIPRLPAGFSQLRNLTVLGLNDMSL 168

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP   G  L  L +L +  N +  LP+S++ LT L  LD   N +  LP  L  L  L
Sbjct: 169 TSLPQDFGC-LSKLVSLELRENLLKNLPESISQLTKLERLDLGDNEIDELPSHLGYLPAL 227

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           + L +  N   L+ LP  IGLL  LV LDVS N++  LP+ IG L  L  L L  N L +
Sbjct: 228 QELWLDHN--QLQRLPPEIGLLKKLVCLDVSENRLEELPEEIGGLECLTDLHLSQNLLET 285

Query: 190 PPMDVV 195
            P  V 
Sbjct: 286 LPGGVA 291



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 22/206 (10%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L  +V L++  N LK LP SI  L+KL+ LD+  N ++ LP  +    +L+EL  + N+L
Sbjct: 178 LSKLVSLELRENLLKNLPESISQLTKLERLDLGDNEIDELPSHLGYLPALQELWLDHNQL 237

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           ++LP  IG  L  L  L ++ N++  LP+ +  L  L  L    N L++LP  +  L NL
Sbjct: 238 QRLPPEIGL-LKKLVCLDVSENRLEELPEEIGGLECLTDLHLSQNLLETLPGGVARLTNL 296

Query: 130 EVLNISQNF---------------------QYLETLPYSIGLLMSLVELDVSYNKITTLP 168
            +L + QN                       +L  LP SIG ++ L  L+V  N +  +P
Sbjct: 297 SILKLDQNRLHTLHDTIGCCVNMQELILTENFLAELPASIGNMVLLNNLNVDRNALVAVP 356

Query: 169 DSIGCLRKLQKLSLEGNPLVSPPMDV 194
            ++G  RKL  LSL  N L   P ++
Sbjct: 357 SALGHCRKLGVLSLRENKLTRLPSEL 382



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 99/187 (52%), Gaps = 5/187 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RL  +  L +  N +  +P+ I     L  LDVS N +  +P+ I + RSL+  + + N 
Sbjct: 85  RLYRLRKLGLSDNDILKIPSDIQNFVNLVELDVSRNEIGDIPEDIRHLRSLQIADFSSNP 144

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           + +LP   GF +L NL  L +N   +  LPQ    L+ L  L+ R N LK+LPE +  L 
Sbjct: 145 IPRLP--AGFSQLRNLTVLGLNDMSLTSLPQDFGCLSKLVSLELRENLLKNLPESISQLT 202

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   ++ LP  +G L +L EL + +N++  LP  IG L+KL  L +  N L
Sbjct: 203 KLERLDLGDN--EIDELPSHLGYLPALQELWLDHNQLQRLPPEIGLLKKLVCLDVSENRL 260

Query: 188 VSPPMDV 194
              P ++
Sbjct: 261 EELPEEI 267



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 96/188 (51%), Gaps = 5/188 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           NQL+ LP  IG L KL  LDVS N LE LP+ I     L +L+ + N L  LP  +   L
Sbjct: 235 NQLQRLPPEIGLLKKLVCLDVSENRLEELPEEIGGLECLTDLHLSQNLLETLPGGVA-RL 293

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            NL  L ++ N++  L  ++    +++ L    N L  LP  + N++ L  LN+ +N   
Sbjct: 294 TNLSILKLDQNRLHTLHDTIGCCVNMQELILTENFLAELPASIGNMVLLNNLNVDRN--A 351

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLS 200
           L  +P ++G    L  L +  NK+T LP  +G   +L  L + GN L   P  +V   L 
Sbjct: 352 LVAVPSALGHCRKLGVLSLRENKLTRLPSELGHCSELHVLDVSGNLLQHLPYALVNLQLK 411

Query: 201 AVKGYLSE 208
           AV  +LSE
Sbjct: 412 AV--WLSE 417



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/162 (35%), Positives = 82/162 (50%), Gaps = 26/162 (16%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLP------------------- 50
           L  +V LDV  N+L+ LP  IG L  L  L +S NLLE+LP                   
Sbjct: 247 LKKLVCLDVSENRLEELPEEIGGLECLTDLHLSQNLLETLPGGVARLTNLSILKLDQNRL 306

Query: 51  ----KTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSL 106
                TI  C +++EL    N L +LP +IG  ++ L  L+++ N +V +P +L H   L
Sbjct: 307 HTLHDTIGCCVNMQELILTENFLAELPASIG-NMVLLNNLNVDRNALVAVPSALGHCRKL 365

Query: 107 RVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSI 148
            VL  R N L  LP +L +   L VL++S N   L+ LPY++
Sbjct: 366 GVLSLRENKLTRLPSELGHCSELHVLDVSGNL--LQHLPYAL 405



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 70/130 (53%), Gaps = 2/130 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ARL N+ +L +  N+L  L ++IGC   ++ L ++ N L  LP +I N   L  LN + N
Sbjct: 291 ARLTNLSILKLDQNRLHTLHDTIGCCVNMQELILTENFLAELPASIGNMVLLNNLNVDRN 350

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  +P  +G     L  LS+  NK+  LP  L H + L VLD   N L+ LP  L NL 
Sbjct: 351 ALVAVPSALG-HCRKLGVLSLRENKLTRLPSELGHCSELHVLDVSGNLLQHLPYALVNL- 408

Query: 128 NLEVLNISQN 137
            L+ + +S+N
Sbjct: 409 QLKAVWLSEN 418



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 68/176 (38%), Gaps = 43/176 (24%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDT------ 75
            K +P   GC  +++ +D   + L ++P+ I     SLEEL  + N +R LP +      
Sbjct: 2   FKYIPIFKGCNRQIEYVDNRHSSLPNVPEEIFRYSNSLEELLLDANHIRDLPKSRSEFLP 61

Query: 76  ----IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
                GF        +  C            L  LR L    N +  +P D++N +NL  
Sbjct: 62  GLLQFGFAATGGSRRTSRC-------AGFFRLYRLRKLGLSDNDILKIPSDIQNFVNL-- 112

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
                                  VELDVS N+I  +P+ I  LR LQ      NP+
Sbjct: 113 -----------------------VELDVSRNEIGDIPEDIRHLRSLQIADFSSNPI 145


>gi|149019123|gb|EDL77764.1| similar to RIKEN cDNA A430093J20 gene, isoform CRA_a [Rattus
           norvegicus]
          Length = 341

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/213 (36%), Positives = 116/213 (54%), Gaps = 23/213 (10%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 120 LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 179 LDLGNNEIYSLPESIG-ALLHLKDLWLDGNQLSELPQEIGNLRNLLCLDVSENRLERLPE 237

Query: 122 DLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELDVS 160
           ++  LI+L  L +SQN                        L  LP +IG   +L EL ++
Sbjct: 238 EISGLISLTDLVVSQNLLETVPDGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLT 297

Query: 161 YNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMD 193
            N++ TLP SIG L+KL  L+ + N LVS P +
Sbjct: 298 ENRLLTLPTSIGKLKKLNNLNADRNKLVSLPKE 330



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 108/195 (55%), Gaps = 7/195 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   AR L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L
Sbjct: 27  VPEEIYRYARSLEELLLD--ANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP+S   L +L  L      L+SL
Sbjct: 85  VELDVSRNDIPEIPESISF-CKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++ NL NL  L + +N   L  LP S+  L  L ELD+  N+I +LP+SIG L  L+ 
Sbjct: 144 PENIGNLYNLASLELRENL--LTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALLHLKD 201

Query: 180 LSLEGNPLVSPPMDV 194
           L L+GN L   P ++
Sbjct: 202 LWLDGNQLSELPQEI 216



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 98/184 (53%), Gaps = 3/184 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L+V D SGN L  LP++    ++L  L+ N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDI 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD   N + SLPE +  L+
Sbjct: 139 SLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALL 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L +  N   L  LP  IG L +L+ LDVS N++  LP+ I  L  L  L +  N L
Sbjct: 198 HLKDLWLDGN--QLSELPQEIGNLRNLLCLDVSENRLERLPEEISGLISLTDLVVSQNLL 255

Query: 188 VSPP 191
            + P
Sbjct: 256 ETVP 259



 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 2/138 (1%)

Query: 57  RSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
           R +E ++     L  +P+ I     +L+ L ++ N++  LP+    L  LR L    N +
Sbjct: 12  RHVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + LP ++ N + L  L++S+N   +  +P SI    +L   D S N +T LP+S   L+ 
Sbjct: 72  QRLPPEIANFMQLVELDVSRN--DIPEIPESISFCKALQVADFSGNPLTRLPESFPELQN 129

Query: 177 LQKLSLEGNPLVSPPMDV 194
           L  LS+    L S P ++
Sbjct: 130 LTCLSVNDISLQSLPENI 147


>gi|295828956|gb|ADG38147.1| AT2G17440-like protein [Capsella grandiflora]
          Length = 162

 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/164 (39%), Positives = 99/164 (60%), Gaps = 3/164 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+HSN++  LP SIG L  L  L++SGN L SLP        LEEL+ + N L  LP++
Sbjct: 2   LDLHSNRIGQLPESIGXLVYLVNLNLSGNQLSSLPPAFSRLIHLEELDLSSNSLSTLPES 61

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L++LK L +  N I  +P  ++  +SL+ L A  N LK+LPE +  L  LE+L + 
Sbjct: 62  IG-SLVSLKKLDVETNNIEEIPHXISGCSSLKELRABYNRLKALPEAVGKLSTLEILTV- 119

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
             +  +  LP ++  + +L ELDVS+N++ ++P+S+   + L K
Sbjct: 120 -RYNNIRQLPTTMSSMANLKELDVSFNELESVPESLCHAKTLVK 162



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/116 (42%), Positives = 75/116 (64%), Gaps = 1/116 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +RL+++  LD+ SN L  LP SIG L  LK LDV  N +E +P  I  C SL+EL AB+N
Sbjct: 40  SRLIHLEELDLSSNSLSTLPESIGSLVSLKKLDVETNNIEEIPHXISGCSSLKELRABYN 99

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDL 123
           +L+ LP+ +G +L  L+ L++  N I  LP +++ + +L+ LD   N L+S+PE L
Sbjct: 100 RLKALPEAVG-KLSTLEILTVRYNNIRQLPTTMSSMANLKELDVSFNELESVPESL 154



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 93/155 (60%), Gaps = 4/155 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+   L+ +V L++  NQL  LP +   L  L+ LD+S N L +LP++I +  SL++
Sbjct: 12  LPESI-GXLVYLVNLNLSGNQLSSLPPAFSRLIHLEELDLSSNSLSTLPESIGSLVSLKK 70

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N + ++P  I     +LK L  B N++  LP+++  L++L +L  R N ++ LP 
Sbjct: 71  LDVETNNIEEIPHXISG-CSSLKELRABYNRLKALPEAVGKLSTLEILTVRYNNIRQLPT 129

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVE 156
            + ++ NL+ L++S  F  LE++P S+    +LV+
Sbjct: 130 TMSSMANLKELDVS--FNELESVPESLCHAKTLVK 162



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 76/125 (60%), Gaps = 3/125 (2%)

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L+ + N++ QLP++IG  L+ L  L+++ N++  LP + + L  L  LD   N L +LP
Sbjct: 1   KLDLHSNRIGQLPESIGX-LVYLVNLNLSGNQLSSLPPAFSRLIHLEELDLSSNSLSTLP 59

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E + +L++L+ L++  N   +E +P+ I    SL EL   YN++  LP+++G L  L+ L
Sbjct: 60  ESIGSLVSLKKLDVETN--NIEEIPHXISGCSSLKELRABYNRLKALPEAVGKLSTLEIL 117

Query: 181 SLEGN 185
           ++  N
Sbjct: 118 TVRYN 122



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 4/95 (4%)

Query: 109 LDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           LD   N +  LPE +  L+ L  LN+S N   L +LP +   L+ L ELD+S N ++TLP
Sbjct: 2   LDLHSNRIGQLPESIGXLVYLVNLNLSGN--QLSSLPPAFSRLIHLEELDLSSNSLSTLP 59

Query: 169 DSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVK 203
           +SIG L  L+KL +E N +   P  +   G S++K
Sbjct: 60  ESIGSLVSLKKLDVETNNIEEIPHXI--SGCSSLK 92


>gi|268575514|ref|XP_002642736.1| Hypothetical protein CBG21115 [Caenorhabditis briggsae]
          Length = 373

 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 96/177 (54%), Gaps = 3/177 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV  LDV  N L  LP  IG L  L  L    NLLE LPK ++   ++E L  + N+L  
Sbjct: 84  NVSFLDVSFNSLSALPEEIGTLRSLTTLIARNNLLEHLPKGMQLLENMEHLYLSGNRLEY 143

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
            P  +   L  LKTL +  N I   P +++ LTSL VL    N L+ +P  +  L NLE 
Sbjct: 144 FPPVV-LTLRKLKTLHLGGNYIDSCPSNISVLTSLTVLYFGGNRLREIPASIGTLENLEN 202

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L +  N   LET+P ++G L  L  L +  NK+ TLP  I  LR+LQ+LSL  NPLV
Sbjct: 203 LGLCDNI--LETIPSTLGDLNWLETLSLHNNKLRTLPTDILNLRRLQQLSLRNNPLV 257



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 68/128 (53%), Gaps = 1/128 (0%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+  L +  N+L+  P  +  L KLK L + GN ++S P  I    SL  L    N+L
Sbjct: 128 LENMEHLYLSGNRLEYFPPVVLTLRKLKTLHLGGNYIDSCPSNISVLTSLTVLYFGGNRL 187

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           R++P +IG  L NL+ L +  N +  +P +L  L  L  L    N L++LP D+ NL  L
Sbjct: 188 REIPASIG-TLENLENLGLCDNILETIPSTLGDLNWLETLSLHNNKLRTLPTDILNLRRL 246

Query: 130 EVLNISQN 137
           + L++  N
Sbjct: 247 QQLSLRNN 254



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 9/104 (8%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L ++ VL    N+L+ +P SIG L  L+ L +  N+LE++P T+ +   LE L+ + NKL
Sbjct: 174 LTSLTVLYFGGNRLREIPASIGTLENLENLGLCDNILETIPSTLGDLNWLETLSLHNNKL 233

Query: 70  RQLPDTIGFELINLKTLSINCNKIV--------ILPQSLTHLTS 105
           R LP  I   L  L+ LS+  N +V        + P SL  LT 
Sbjct: 234 RTLPTDI-LNLRRLQQLSLRNNPLVHSFVHNMDLCPPSLKELTG 276


>gi|421110784|ref|ZP_15571275.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803881|gb|EKS10008.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 371

 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 116/201 (57%), Gaps = 4/201 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L N+  +D ++NQLK LP  IG L  L+ L +S N +  LPK I N + L++
Sbjct: 167 IPKEI-EQLQNLQEMDSNNNQLKTLPKEIGNLQHLQKLYLSSNKITILPKEIGNLQHLQK 225

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + NK+  LP  IG  L  L+ L +  N++  LP+ +  L +L+VL    N L ++P+
Sbjct: 226 LYLSSNKITILPKEIG-NLQKLEYLYLEVNQLTTLPKEIGQLRNLKVLYLDHNNLANIPK 284

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L NL+ L++ +N   L TLP  I  L SL  LD+S N +T+ P+ IG L+ L+ L 
Sbjct: 285 EIGKLQNLQTLSLDRN--KLTTLPKEIENLQSLESLDLSNNPLTSFPEEIGKLQHLKWLR 342

Query: 182 LEGNPLVSPPMDVVEQGLSAV 202
           LE  P + P  + + + L  V
Sbjct: 343 LENIPTLLPEKEKIRKLLPNV 363



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++  L +  NQL  +P     L  L+ L +S N L ++PK IE  ++L+E+++N N
Sbjct: 126 GKLQSLQELILGKNQLTTIPKEFWQLQYLQRLSLSFNQLTAIPKEIEQLQNLQEMDSNNN 185

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG  L +L+ L ++ NKI ILP+ + +L  L+ L    N +  LP+++ NL 
Sbjct: 186 QLKTLPKEIG-NLQHLQKLYLSSNKITILPKEIGNLQHLQKLYLSSNKITILPKEIGNLQ 244

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L +  N   L TLP  IG L +L  L + +N +  +P  IG L+ LQ LSL+ N L
Sbjct: 245 KLEYLYLEVN--QLTTLPKEIGQLRNLKVLYLDHNNLANIPKEIGKLQNLQTLSLDRNKL 302

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 303 TTLPKEI 309



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/182 (36%), Positives = 106/182 (58%), Gaps = 3/182 (1%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           V VL +++ +L  LP  IG L  L+ LD+S N +  LP+ I N +SL++LN   N+L  L
Sbjct: 39  VRVLHLNAKKLTALPKEIGNLQHLQKLDLSFNTITVLPQEIGNLQSLQDLNLWENELTTL 98

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P  IG +L +L+ L++  N++  LP+ +  L SL+ L    N L ++P++   L  L+ L
Sbjct: 99  PKEIG-KLQSLQRLTLWENQLTTLPKEIGKLQSLQELILGKNQLTTIPKEFWQLQYLQRL 157

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
           ++S  F  L  +P  I  L +L E+D + N++ TLP  IG L+ LQKL L  N +   P 
Sbjct: 158 SLS--FNQLTAIPKEIEQLQNLQEMDSNNNQLKTLPKEIGNLQHLQKLYLSSNKITILPK 215

Query: 193 DV 194
           ++
Sbjct: 216 EI 217



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 62/99 (62%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L + T +RVL      L +LP+++ NL +L+ L++S  F  +  LP  IG L SL 
Sbjct: 29  LNEALQNPTQVRVLHLNAKKLTALPKEIGNLQHLQKLDLS--FNTITVLPQEIGNLQSLQ 86

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +L++  N++TTLP  IG L+ LQ+L+L  N L + P ++
Sbjct: 87  DLNLWENELTTLPKEIGKLQSLQRLTLWENQLTTLPKEI 125


>gi|26341692|dbj|BAC34508.1| unnamed protein product [Mus musculus]
 gi|148694404|gb|EDL26351.1| leucine rich repeat containing 1, isoform CRA_c [Mus musculus]
          Length = 349

 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 112/193 (58%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP ++   R LEE
Sbjct: 120 LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP++IG  L++LK L ++ N++  LPQ + +L +L  LD   N L+ LPE
Sbjct: 179 LDLGNNEIYNLPESIG-ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPE 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L  L ISQN   LET+P  IG L  L  L +  N++T LP++IG    L +L 
Sbjct: 238 EISGLTSLTYLVISQNL--LETIPEGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELV 295

Query: 182 LEGNPLVSPPMDV 194
           L  N L++ P  +
Sbjct: 296 LTENRLLTLPKSI 308



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 107/195 (54%), Gaps = 7/195 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   AR L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L
Sbjct: 27  VPEEIYRYARSLEELLLD--ANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP+S   L +L  L      L+SL
Sbjct: 85  VELDVSRNDIPEIPESIAF-CKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++ NL NL  L + +N   L  LP S+  L  L ELD+  N+I  LP+SIG L  L+ 
Sbjct: 144 PENIGNLYNLASLELRENL--LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKD 201

Query: 180 LSLEGNPLVSPPMDV 194
           L L+GN L   P ++
Sbjct: 202 LWLDGNQLSELPQEI 216



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 99/187 (52%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L+V D SGN L  LP++    ++L  L+ N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDI 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP+ IG  L NL +L +  N +  LP SLT L  L  LD   N + +LPE +  L+
Sbjct: 139 SLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALL 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L +  N   L  LP  IG L +L+ LDVS N++  LP+ I  L  L  L +  N L
Sbjct: 198 HLKDLWLDGN--QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLL 255

Query: 188 VSPPMDV 194
            + P  +
Sbjct: 256 ETIPEGI 262



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 68/113 (60%), Gaps = 1/113 (0%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N++ LDV  N+L+ LP  I  L+ L  L +S NLLE++P+ I   + L  L  + N+L
Sbjct: 219 LKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRL 278

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED 122
            QLP+ IG +  NL  L +  N+++ LP+S+  L  L  L+A  N L SLP++
Sbjct: 279 TQLPEAIG-DCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 330



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 2/138 (1%)

Query: 57  RSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
           R +E ++     L  +P+ I     +L+ L ++ N++  LP+    L  LR L    N +
Sbjct: 12  RHVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + LP ++ N + L  L++S+N   +  +P SI    +L   D S N +T LP+S   L+ 
Sbjct: 72  QRLPPEIANFMQLVELDVSRN--DIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQN 129

Query: 177 LQKLSLEGNPLVSPPMDV 194
           L  LS+    L S P ++
Sbjct: 130 LTCLSVNDISLQSLPENI 147


>gi|355779520|gb|EHH63996.1| Malignant fibrous histiocytoma-amplified sequence with leucine-rich
           tandem repeats 1, partial [Macaca fascicularis]
          Length = 944

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 119/250 (47%), Gaps = 44/250 (17%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P  L A L  +  LDV  N+L  LP+S+ CLS+L+ LDV  N L + P+ +    +LEE
Sbjct: 42  LPAQLGA-LARLEELDVSFNRLTHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEE 100

Query: 62  LNANFNKLRQLPDTI---------------------GF-ELINLKTLSINCNKIVILPQS 99
           L+ + N+LR LP+ I                     GF EL +L++L ++ N +  LP  
Sbjct: 101 LDVSSNRLRGLPEDISALCALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQ 160

Query: 100 LTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNF--------------------- 138
            + L  L++L+   N L+  P  L  L  LE L +S+N                      
Sbjct: 161 FSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDN 220

Query: 139 QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQG 198
             +  LP SI  L  L EL +  N+I  LPD+ G L ++    ++ NPL+ PP +V  +G
Sbjct: 221 NRIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKG 280

Query: 199 LSAVKGYLSE 208
           +  +  Y  E
Sbjct: 281 IPYIAAYQKE 290



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 92/171 (53%), Gaps = 4/171 (2%)

Query: 16  LDVHSNQLKCL-PNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           LDV  N+L  L    +  L +L+ L++S N L +LP  +     LEEL+ +FN+L  LPD
Sbjct: 8   LDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALARLEELDVSFNRLTHLPD 67

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
           ++   L  L+TL ++ N++   P+ L  L +L  LD   N L+ LPED+  L  L++L +
Sbjct: 68  SLSC-LSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALCALKILWL 126

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           S     L TLP     L SL  L +  N +  LP     L++L+ L+L  N
Sbjct: 127 SG--AELGTLPAGFCELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSN 175



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 4/95 (4%)

Query: 102 HLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSY 161
           HLT L V   RL  L +  E +  L  L  LN+S N   L  LP  +G L  L ELDVS+
Sbjct: 4   HLTELDVSHNRLTALGA--EVVSALRELRKLNLSHN--QLPALPAQLGALARLEELDVSF 59

Query: 162 NKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           N++T LPDS+ CL +L+ L ++ N L + P  +++
Sbjct: 60  NRLTHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQ 94


>gi|126330778|ref|XP_001373365.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           [Monodelphis domestica]
          Length = 1069

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 111/236 (47%), Gaps = 43/236 (18%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LDV  N+L  LP+++GCL  L+ LD+  N L + P  +    +LEEL+ + N+LR LP+ 
Sbjct: 178 LDVSFNRLPHLPDALGCLRALRTLDLDHNQLTAFPPQLLQLGTLEELDLSGNRLRGLPEE 237

Query: 76  IGF----------------------ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL 113
           IG                       +L +L++L ++ N +  LP   + L  LR+L+   
Sbjct: 238 IGALRALKILWLSGAELGTLPSGFCQLASLESLMLDSNGLQALPAQFSCLQQLRMLNLSS 297

Query: 114 NCLKSLPEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLM 152
           NC +  P  L  L +LE L +S+N                        +  LP SI  L 
Sbjct: 298 NCFEDFPGALLPLASLEELYLSRNRLTALPALVSRLSRLLTLWLDNNRIRYLPDSIVELT 357

Query: 153 SLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSE 208
            L EL +  N+I  LPD+ G L ++    ++ NPL+ PP +V  +G+  +  Y  E
Sbjct: 358 GLEELVLQGNQIAVLPDNFGQLSRVGLWKVKDNPLIQPPYEVCMKGIPYIAAYQKE 413



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/181 (35%), Positives = 96/181 (53%), Gaps = 7/181 (3%)

Query: 6   LTARLLNVVVLDVHSNQLKCLPNSI-GCLSKLKVLDVSGNLLESLPKTIENCRSLEELNA 64
           L ARL     LDV  N+L  +   +   L +L+ L++S N L  LP  + +   LEEL+ 
Sbjct: 124 LGARLTE---LDVSHNRLGAVAAEVLSALPQLRKLNLSHNQLADLPAQLGSLGHLEELDV 180

Query: 65  NFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLE 124
           +FN+L  LPD +G  L  L+TL ++ N++   P  L  L +L  LD   N L+ LPE++ 
Sbjct: 181 SFNRLPHLPDALGC-LRALRTLDLDHNQLTAFPPQLLQLGTLEELDLSGNRLRGLPEEIG 239

Query: 125 NLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEG 184
            L  L++L +S     L TLP     L SL  L +  N +  LP    CL++L+ L+L  
Sbjct: 240 ALRALKILWLSG--AELGTLPSGFCQLASLESLMLDSNGLQALPAQFSCLQQLRMLNLSS 297

Query: 185 N 185
           N
Sbjct: 298 N 298



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 82/157 (52%), Gaps = 14/157 (8%)

Query: 49  LPKTIENCRSLEELNANFNKLRQLPDTIGFELINL---KTLSINCNKIVILP----QSLT 101
           LP+ I +   +E LN   N L +LP  +   L +L   + L +  N++  LP    Q   
Sbjct: 70  LPQDIAD---VEVLNLGNNALDELPAGLATALGSLPLLRGLVLRRNRLPRLPPLLGQLGA 126

Query: 102 HLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSY 161
            LT L V   RL  + +  E L  L  L  LN+S N   L  LP  +G L  L ELDVS+
Sbjct: 127 RLTELDVSHNRLGAVAA--EVLSALPQLRKLNLSHN--QLADLPAQLGSLGHLEELDVSF 182

Query: 162 NKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQG 198
           N++  LPD++GCLR L+ L L+ N L + P  +++ G
Sbjct: 183 NRLPHLPDALGCLRALRTLDLDHNQLTAFPPQLLQLG 219



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 3/127 (2%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L  ++LD  SN L+ LP    CL +L++L++S N  E  P  +    SLEEL  + N+L 
Sbjct: 267 LESLMLD--SNGLQALPAQFSCLQQLRMLNLSSNCFEDFPGALLPLASLEELYLSRNRLT 324

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  +   L  L TL ++ N+I  LP S+  LT L  L  + N +  LP++   L  + 
Sbjct: 325 ALPALVS-RLSRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVG 383

Query: 131 VLNISQN 137
           +  +  N
Sbjct: 384 LWKVKDN 390


>gi|194211222|ref|XP_001498354.2| PREDICTED: leucine-rich repeat-containing protein 7 [Equus
           caballus]
          Length = 1537

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 109/186 (58%), Gaps = 4/186 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP +IG L  L  LD+S N +E++   I  C +LE+
Sbjct: 199 LPEVLD-QIQNLRELWMDNNALQVLPGNIGKLKMLIYLDMSKNRIETVDMDISGCEALED 257

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+QLPD+IG  L  L TL ++ N++ ILP ++ +L+ L   D   N L+SLP 
Sbjct: 258 LLLSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPS 316

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L + +NF  L  LP  IG   ++  + +  NK+  LP+ IG ++KL+ L+
Sbjct: 317 TIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLN 374

Query: 182 LEGNPL 187
           L  N L
Sbjct: 375 LSDNRL 380



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/233 (32%), Positives = 108/233 (46%), Gaps = 50/233 (21%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP +I  L  LK LD+S N ++  P+ I+ C+ L 
Sbjct: 59  EELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   L  LR+L+ R N LK+L
Sbjct: 119 IIEASVNPISKLPD--GFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTL 176

Query: 120 PEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELD 158
           P+ +  L  LE L++  N                        L+ LP +IG L  L+ LD
Sbjct: 177 PKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGNIGKLKMLIYLD 236

Query: 159 VSYNKITT-----------------------LPDSIGCLRKLQKLSLEGNPLV 188
           +S N+I T                       LPDSIG L+KL  L ++ N L 
Sbjct: 237 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLT 289



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP+SIG L KL  L V  N L  LP TI N   LEE + + N+L  LP TIG+ 
Sbjct: 262 SNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGY- 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+TL+++ N +  LP+ +    ++ V+  R N L+ LPE++  +  L VLN+S N  
Sbjct: 321 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+ LP+S   L  L  L +S N+   L
Sbjct: 379 RLKNLPFSFTKLKELAALWLSDNQSKAL 406



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 69  LRQLP-DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P +   FE   L+ L ++ N+I  LP+ L +  +LR L    N L +LP  + +L+
Sbjct: 34  LQQVPKEVFNFERT-LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLV 92

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           NL+ L+IS+N   ++  P +I     L  ++ S N I+ LPD    L  L +L L
Sbjct: 93  NLKELDISKNG--VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYL 145



 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 38/61 (62%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP  IG + KL+VL++S N L++LP +    + L  L  + N+ + 
Sbjct: 346 NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKA 405

Query: 72  L 72
           L
Sbjct: 406 L 406


>gi|302822487|ref|XP_002992901.1| hypothetical protein SELMODRAFT_136157 [Selaginella moellendorffii]
 gi|300139246|gb|EFJ05990.1| hypothetical protein SELMODRAFT_136157 [Selaginella moellendorffii]
          Length = 584

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 127/257 (49%), Gaps = 29/257 (11%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L++VVVL++  N+L+ LP SIG L+ LK LDVS N +  LP  I N  SL +  A+ N
Sbjct: 65  GNLVSVVVLNISYNELESLPESIGMLTSLKTLDVSHNAILELPVEIGNLASLVKFLASNN 124

Query: 68  KLRQLPDTIGF--ELINLK--------------------TLSINCNKIVILPQSLTH-LT 104
           ++++LP TIG   +L  LK                    +LSI  NKI   P SL H L 
Sbjct: 125 QIKELPSTIGLCVDLAELKLSNNGLTFLPDQLASCSRLISLSIEGNKITGFPSSLFHSLG 184

Query: 105 SLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
           +L  L+A  N +  LPE++ NL  L  L++ QN   ++++P S+     LVE     N +
Sbjct: 185 NLTELNAGKNAITELPEEIGNLTRLLRLDLHQN--KIKSIPSSLVNCSMLVEAYFGDNLL 242

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVG 224
           ++LP+ IG L+ L    L GN L   P+      LS     L    NN    P +  ++G
Sbjct: 243 SSLPNEIGNLQSLLTFDLHGNQLSEFPVSACSMRLSV----LDLSNNNLSGLPPELGFMG 298

Query: 225 KLVKYGTFNGALRNHRS 241
            L K       LR  R+
Sbjct: 299 SLRKLVLTGNPLRTLRT 315



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 102/224 (45%), Gaps = 24/224 (10%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L ++V     +NQ+K LP++IG    L  L +S N L  LP  + +C  L  L+   N
Sbjct: 111 GNLASLVKFLASNNQIKELPSTIGLCVDLAELKLSNNGLTFLPDQLASCSRLISLSIEGN 170

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           K+   P ++   L NL  L+   N I  LP+ + +LT L  LD   N +KS+P  L N  
Sbjct: 171 KITGFPSSLFHSLGNLTELNAGKNAITELPEEIGNLTRLLRLDLHQNKIKSIPSSLVNCS 230

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVE----------------------LDVSYNKIT 165
            L       N   L +LP  IG L SL+                       LD+S N ++
Sbjct: 231 MLVEAYFGDNL--LSSLPNEIGNLQSLLTFDLHGNQLSEFPVSACSMRLSVLDLSNNNLS 288

Query: 166 TLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEK 209
            LP  +G +  L+KL L GNPL +    +V     A+  YL ++
Sbjct: 289 GLPPELGFMGSLRKLVLTGNPLRTLRTSLVTGSTPALLKYLRDR 332



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 116/224 (51%), Gaps = 30/224 (13%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
            L +    L  +P ++     L  LD++ N ++ LP  +  C S+E L    NK+++ P 
Sbjct: 361 ALSLSDKNLDHVPPAVWESCDLVQLDLAKNCIQELPPEMSMCTSMEALILADNKIQEWPG 420

Query: 75  TIGFELINLKTLSINCNKIVIL-PQSLTHLTSLRVLD-----ARL---NCL--------- 116
           ++   L NLK L++  N IV L P + + +++L++LD     A+L    CL         
Sbjct: 421 SVFASLPNLKHLNLARNPIVALPPGAFSAVSNLQLLDLSGVVAQLPPPPCLSLMTGLQEL 480

Query: 117 -------KSLPEDLENLINLEVLNISQNFQYLETLPYS--IGLLMSLVELDVSYNKITTL 167
                   ++P DL  + +L +L++SQN   +  LP +  +   ++L ELD++ N ++TL
Sbjct: 481 RLMRTQMAAIPWDLPRMSSLRILDLSQN--NISVLPQASLLSSFITLEELDLTDNNLSTL 538

Query: 168 PDSIGCLR-KLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKM 210
           P  +G L   L+KL ++GNPL S    ++E+G   +  YL  K+
Sbjct: 539 PPQLGYLEPTLRKLKVDGNPLRSIRRGILERGTKELLQYLHGKL 582



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 71/139 (51%), Gaps = 21/139 (15%)

Query: 74  DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLN 133
           D   +EL++L  L +  NKI +L Q L +L S+ VL+   N L+SLPE +  L +L+ L+
Sbjct: 38  DEKWWELVDLHRLVLAHNKIKLLSQELGNLVSVVVLNISYNELESLPESIGMLTSLKTLD 97

Query: 134 ISQNF---------------------QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
           +S N                        ++ LP +IGL + L EL +S N +T LPD + 
Sbjct: 98  VSHNAILELPVEIGNLASLVKFLASNNQIKELPSTIGLCVDLAELKLSNNGLTFLPDQLA 157

Query: 173 CLRKLQKLSLEGNPLVSPP 191
              +L  LS+EGN +   P
Sbjct: 158 SCSRLISLSIEGNKITGFP 176



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 69/136 (50%), Gaps = 2/136 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
            P SL   L N+  L+   N +  LP  IG L++L  LD+  N ++S+P ++ NC  L E
Sbjct: 175 FPSSLFHSLGNLTELNAGKNAITELPEEIGNLTRLLRLDLHQNKIKSIPSSLVNCSMLVE 234

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
                N L  LP+ IG  L +L T  ++ N++   P S   +  L VLD   N L  LP 
Sbjct: 235 AYFGDNLLSSLPNEIG-NLQSLLTFDLHGNQLSEFPVSACSM-RLSVLDLSNNNLSGLPP 292

Query: 122 DLENLINLEVLNISQN 137
           +L  + +L  L ++ N
Sbjct: 293 ELGFMGSLRKLVLTGN 308



 Score = 40.8 bits (94), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 46/74 (62%), Gaps = 2/74 (2%)

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E    L++L  L ++ N   ++ L   +G L+S+V L++SYN++ +LP+SIG L  L+ L
Sbjct: 39  EKWWELVDLHRLVLAHN--KIKLLSQELGNLVSVVVLNISYNELESLPESIGMLTSLKTL 96

Query: 181 SLEGNPLVSPPMDV 194
            +  N ++  P+++
Sbjct: 97  DVSHNAILELPVEI 110



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 16/191 (8%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESL---------PKTIENCR---SLEEL 62
           VLD+ +N L  LP  +G +  L+ L ++GN L +L         P  ++  R   + E+ 
Sbjct: 279 VLDLSNNNLSGLPPELGFMGSLRKLVLTGNPLRTLRTSLVTGSTPALLKYLRDRSTAEDG 338

Query: 63  NANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED 122
           N     +++         ++ K LS++   +  +P ++     L  LD   NC++ LP +
Sbjct: 339 NIFGMNIQEQVVQAARAAVSSKALSLSDKNLDHVPPAVWESCDLVQLDLAKNCIQELPPE 398

Query: 123 LENLINLEVLNISQNFQYLETLPYSI-GLLMSLVELDVSYNKITTL-PDSIGCLRKLQKL 180
           +    ++E L ++ N   ++  P S+   L +L  L+++ N I  L P +   +  LQ L
Sbjct: 399 MSMCTSMEALILADN--KIQEWPGSVFASLPNLKHLNLARNPIVALPPGAFSAVSNLQLL 456

Query: 181 SLEGNPLVSPP 191
            L G     PP
Sbjct: 457 DLSGVVAQLPP 467


>gi|402854924|ref|XP_003892101.1| PREDICTED: leucine-rich repeat-containing protein 7, partial [Papio
           anubis]
          Length = 1338

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/177 (36%), Positives = 104/177 (58%), Gaps = 3/177 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           ++ N+  L + +N L+ LP SIG L  L  LD+S N +E++   I  C +LE+L  + N 
Sbjct: 6   QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNM 65

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L+QLPD+IG  L  L TL ++ N++ +LP ++ +L+ L   D   N L+SLP  +  L +
Sbjct: 66  LQQLPDSIGL-LKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHS 124

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L  L + +NF  L  LP  IG   ++  + +  NK+  LP+ IG ++KL+ L+L  N
Sbjct: 125 LRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDN 179



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP+SIG L KL  L V  N L  LP TI N   LEE + + N+L  LP TIG+ 
Sbjct: 63  SNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGY- 121

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+TL+++ N +  LP+ +    ++ V+  R N L+ LPE++  +  L VLN+S N  
Sbjct: 122 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDN-- 179

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+ LP+S   L  L  L +S N+   L
Sbjct: 180 RLKNLPFSFTKLKELAALWLSDNQSKAL 207



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 2/116 (1%)

Query: 79  ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNF 138
           ++ NL+ L ++ N + +LP S+  L  L  LD   N ++++  D+     LE L +S N 
Sbjct: 6   QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNM 65

Query: 139 QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             L+ LP SIGLL  L  L V  N++T LP++IG L  L++     N L S P  +
Sbjct: 66  --LQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTI 119



 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 77/145 (53%), Gaps = 3/145 (2%)

Query: 50  PKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           P+ ++  ++L EL  + N L+ LP +IG +L  L  L ++ N+I  +   ++   +L  L
Sbjct: 1   PEVLDQIQNLRELWMDNNALQVLPGSIG-KLKMLVYLDMSKNRIETVDMDISGCEALEDL 59

Query: 110 DARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPD 169
               N L+ LP+ +  L  L  L +  N   L  LP +IG L  L E D S N++ +LP 
Sbjct: 60  LLSSNMLQQLPDSIGLLKKLTTLKVDDN--QLTMLPNTIGNLSLLEEFDCSCNELESLPS 117

Query: 170 SIGCLRKLQKLSLEGNPLVSPPMDV 194
           +IG L  L+ L+++ N L   P ++
Sbjct: 118 TIGYLHSLRTLAVDENFLPELPREI 142



 Score = 41.6 bits (96), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 38/61 (62%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP  IG + KL+VL++S N L++LP +    + L  L  + N+ + 
Sbjct: 147 NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKA 206

Query: 72  L 72
           L
Sbjct: 207 L 207


>gi|449493983|ref|XP_002193318.2| PREDICTED: leucine-rich repeat-containing protein 30 [Taeniopygia
           guttata]
          Length = 298

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/218 (35%), Positives = 119/218 (54%), Gaps = 13/218 (5%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IP SL  +L  +VVL++  N LKCLP  IG L  LKVL V+ N L+ +P  +  CR LE
Sbjct: 81  VIPPSL-GKLDRLVVLNLGGNCLKCLPKEIGLLRNLKVLFVNMNCLKEVPAELSLCRKLE 139

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+ + N + QLP +   +L +L+ L+++ N+ V +P  +  L SL  L    N L+++ 
Sbjct: 140 VLSLSHNCISQLPLSFT-DLTSLRKLNLSNNRFVQIPLCIFALRSLDFLHLGSNKLENIA 198

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDS---------I 171
           E ++ L+NL++  +  N   + +LP S+  + +L  L+  YN I TLPD          I
Sbjct: 199 ESIQYLVNLQIFIVENN--NIRSLPRSLCHISTLELLNADYNAIQTLPDELYLLRRLRRI 256

Query: 172 GCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEK 209
                 + L +  NPL  P  +VVE GL  +  YL +K
Sbjct: 257 AWNPMDKGLHIAHNPLARPLPEVVEGGLDVLFNYLRDK 294


>gi|418688697|ref|ZP_13249839.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400362083|gb|EJP18029.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 288

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/181 (40%), Positives = 107/181 (59%), Gaps = 6/181 (3%)

Query: 12  NVVVLDVHSNQ---LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +V+VL+   N+   LK LP  IG L  LK L +S N + +LP  I N ++L+ L+ N N+
Sbjct: 48  DVLVLNYRDNEENPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNR 107

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  +P  IG  L NLK LSI  NK+  LP+ + +L +L+ L    N LK LP+++ NL  
Sbjct: 108 LETIPKEIG-NLKNLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRK 166

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ +++S N   L  LP  I  L SL+E+ +  N+ TTLP  IG L+ L+ L L  N L+
Sbjct: 167 LQRMHLSTN--ELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLI 224

Query: 189 S 189
           S
Sbjct: 225 S 225



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 110/188 (58%), Gaps = 3/188 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L + +N++  LP  IG L  L+VL ++GN LE++PK I N ++L+EL+  +N
Sbjct: 70  GNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWN 129

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL+ LP  IG  L NLK L ++ N++ ILPQ + +L  L+ +    N L  LP++++NL 
Sbjct: 130 KLQTLPKEIG-NLKNLKELYLSRNQLKILPQEIGNLRKLQRMHLSTNELTKLPQEIKNLE 188

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  + +  N     TLP  IG L +L  L +  N++ +L   IG L+ L++L LE N L
Sbjct: 189 SLLEIYLYDN--QFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELYLEENQL 246

Query: 188 VSPPMDVV 195
              P  + 
Sbjct: 247 TMLPKQIA 254



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 112/190 (58%), Gaps = 3/190 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+ VL ++ N+L+ +P  IG L  LK L +  N L++LPK I N ++L+EL  + N
Sbjct: 93  GNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTLPKEIGNLKNLKELYLSRN 152

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG  L  L+ + ++ N++  LPQ + +L SL  +    N   +LP+++ NL 
Sbjct: 153 QLKILPQEIG-NLRKLQRMHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLK 211

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L + +N Q +  LP  IG L +L EL +  N++T LP  I  L++L +LSL+GN  
Sbjct: 212 NLRNLVLGRN-QLISLLP-EIGNLKNLKELYLEENQLTMLPKQIAALKQLARLSLKGNQF 269

Query: 188 VSPPMDVVEQ 197
            S   + +++
Sbjct: 270 PSEEKERIQR 279



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 2/85 (2%)

Query: 110 DARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPD 169
           D   N LK+LP+++ NL NL+ L +S N   + TLP  IG L +L  L ++ N++ T+P 
Sbjct: 56  DNEENPLKTLPKEIGNLQNLKELYLSAN--EITTLPPEIGNLKNLQVLSLNGNRLETIPK 113

Query: 170 SIGCLRKLQKLSLEGNPLVSPPMDV 194
            IG L+ L++LS+E N L + P ++
Sbjct: 114 EIGNLKNLKELSIEWNKLQTLPKEI 138



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 1/78 (1%)

Query: 118 SLPEDLENLINLEVLNISQNFQY-LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
            L E  +N  ++ VLN   N +  L+TLP  IG L +L EL +S N+ITTLP  IG L+ 
Sbjct: 38  DLEEAFKNPKDVLVLNYRDNEENPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKN 97

Query: 177 LQKLSLEGNPLVSPPMDV 194
           LQ LSL GN L + P ++
Sbjct: 98  LQVLSLNGNRLETIPKEI 115


>gi|354478358|ref|XP_003501382.1| PREDICTED: leucine-rich repeat-containing protein 7-like
           [Cricetulus griseus]
          Length = 1358

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 108/184 (58%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP SIG L  L  LD+S N +E++   I  C +LE+
Sbjct: 20  LPEVLD-QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALED 78

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+QLPD+IG  L  L TL ++ N++ +LP ++ +L+ L   D   N L+SLP 
Sbjct: 79  LLLSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPS 137

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L + +NF  L  LP  IG   ++  + +  NK+  LP+ IG +++L+ L+
Sbjct: 138 TIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLN 195

Query: 182 LEGN 185
           L  N
Sbjct: 196 LSDN 199



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP+SIG L KL  L V  N L  LP TI N   LEE + + N+L  LP TIG+ 
Sbjct: 83  SNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGY- 141

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+TL+++ N +  LP+ +    ++ V+  R N L+ LPE++  +  L VLN+S N  
Sbjct: 142 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDN-- 199

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+ LP+S   L  L  L +S N+   L
Sbjct: 200 RLKNLPFSFTKLKELAALWLSDNQSKAL 227



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 3/153 (1%)

Query: 33  LSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNK 92
           L++L+ LD+  N    LP+ ++  ++L EL  + N L+ LP +IG +L  L  L ++ N+
Sbjct: 4   LAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIG-KLKMLVYLDMSKNR 62

Query: 93  IVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLM 152
           I  +   ++   +L  L    N L+ LP+ +  L  L  L +  N   L  LP +IG L 
Sbjct: 63  IETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDN--QLTMLPNTIGNLS 120

Query: 153 SLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            L E D S N++ +LP +IG L  L+ L+++ N
Sbjct: 121 LLEEFDCSCNELESLPSTIGYLHSLRTLAVDEN 153



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 59  LEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKS 118
           LE L+   N+  +LP+ +  ++ NL+ L ++ N + +LP S+  L  L  LD   N +++
Sbjct: 7   LERLDLGNNEFSELPEVLD-QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIET 65

Query: 119 LPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQ 178
           +  D+     LE L +S N   L+ LP SIGLL  L  L V  N++T LP++IG L  L+
Sbjct: 66  VDMDISGCEALEDLLLSSNM--LQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLE 123

Query: 179 KLSLEGNPLVSPPMDV 194
           +     N L S P  +
Sbjct: 124 EFDCSCNELESLPSTI 139



 Score = 40.4 bits (93), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 38/61 (62%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP  IG + +L+VL++S N L++LP +    + L  L  + N+ + 
Sbjct: 167 NVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKA 226

Query: 72  L 72
           L
Sbjct: 227 L 227


>gi|295828954|gb|ADG38146.1| AT2G17440-like protein [Capsella grandiflora]
          Length = 162

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/164 (39%), Positives = 99/164 (60%), Gaps = 3/164 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+HSN++  LP SIG L  L  L++SGN L SLP        LEEL+ + N L  LP++
Sbjct: 2   LDLHSNRIGQLPXSIGBLVYLVNLNLSGNQLSSLPPXFSRLIHLEELDLSSNSLSTLPES 61

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L++LK L +  N I  JP  ++  +SL+ L A  N LK+LPE +  L  LE+L + 
Sbjct: 62  IG-SLVSLKKLDVETNNIEEJPHXISXCSSLKELRABYNRLKALPEAVGKLSTLEILTV- 119

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
             +  +  LP ++  + +L ELDVS+N++ ++P+S+   + L K
Sbjct: 120 -RYNNIRQLPTTMSSMANLKELDVSFNELESVPESLCHAKTLVK 162



 Score = 90.1 bits (222), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 49/116 (42%), Positives = 75/116 (64%), Gaps = 1/116 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +RL+++  LD+ SN L  LP SIG L  LK LDV  N +E JP  I  C SL+EL AB+N
Sbjct: 40  SRLIHLEELDLSSNSLSTLPESIGSLVSLKKLDVETNNIEEJPHXISXCSSLKELRABYN 99

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDL 123
           +L+ LP+ +G +L  L+ L++  N I  LP +++ + +L+ LD   N L+S+PE L
Sbjct: 100 RLKALPEAVG-KLSTLEILTVRYNNIRQLPTTMSSMANLKELDVSFNELESVPESL 154



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 91/155 (58%), Gaps = 4/155 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P S+   L+ +V L++  NQL  LP     L  L+ LD+S N L +LP++I +  SL++
Sbjct: 12  LPXSI-GBLVYLVNLNLSGNQLSSLPPXFSRLIHLEELDLSSNSLSTLPESIGSLVSLKK 70

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N + +JP  I     +LK L  B N++  LP+++  L++L +L  R N ++ LP 
Sbjct: 71  LDVETNNIEEJPHXISX-CSSLKELRABYNRLKALPEAVGKLSTLEILTVRYNNIRQLPT 129

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVE 156
            + ++ NL+ L++S  F  LE++P S+    +LV+
Sbjct: 130 TMSSMANLKELDVS--FNELESVPESLCHAKTLVK 162



 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 71/141 (50%), Gaps = 5/141 (3%)

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L ++ N+I  LP S+  L  L  L+   N L SLP     LI+LE L++S N   L TLP
Sbjct: 2   LDLHSNRIGQLPXSIGBLVYLVNLNLSGNQLSSLPPXFSRLIHLEELDLSSN--SLSTLP 59

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGY 205
            SIG L+SL +LDV  N I  JP  I     L++L  + N L + P  V   G  +    
Sbjct: 60  ESIGSLVSLKKLDVETNNIEEJPHXISXCSSLKELRABYNRLKALPEAV---GKLSTLEI 116

Query: 206 LSEKMNNDHKSPKKKSWVGKL 226
           L+ + NN  + P   S +  L
Sbjct: 117 LTVRYNNIRQLPTTMSSMANL 137


>gi|421127137|ref|ZP_15587361.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421136066|ref|ZP_15596177.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019800|gb|EKO86614.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410435227|gb|EKP84359.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 241

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/175 (37%), Positives = 100/175 (57%), Gaps = 3/175 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V +L++   +LK  P  IG L  L+ L +S N   +LPK IE    L+ELN   N+L 
Sbjct: 48  LGVRILNLSRQKLKTFPKEIGQLKNLQELHLSSNQFTTLPKEIEQLEKLQELNLWNNQLI 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  I  +L NL+ L ++ N+++ LP+ +  L  L+ L    N L ++P ++  L NL+
Sbjct: 108 TLPKEIA-QLKNLQELYLSENQLMTLPKEIGQLEKLQKLYLNANQLTTIPNEIAQLQNLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           VL +S N    +T+P   G L +L EL++  N++TT+P  IG L+ LQ L L  N
Sbjct: 167 VLFLSYN--QFKTIPVEFGQLKNLQELNLDANQLTTIPKEIGQLQNLQTLYLRNN 219



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 66/116 (56%), Gaps = 2/116 (1%)

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
           + ++ L+++  K+   P+ +  L +L+ L    N   +LP+++E L  L+ LN+  N   
Sbjct: 48  LGVRILNLSRQKLKTFPKEIGQLKNLQELHLSSNQFTTLPKEIEQLEKLQELNLWNN--Q 105

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           L TLP  I  L +L EL +S N++ TLP  IG L KLQKL L  N L + P ++ +
Sbjct: 106 LITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQKLYLNANQLTTIPNEIAQ 161



 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 63/107 (58%), Gaps = 1/107 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A+L N+  L +  NQL  LP  IG L KL+ L ++ N L ++P  I   ++L+ L  ++N
Sbjct: 114 AQLKNLQELYLSENQLMTLPKEIGQLEKLQKLYLNANQLTTIPNEIAQLQNLQVLFLSYN 173

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLN 114
           + + +P   G +L NL+ L+++ N++  +P+ +  L +L+ L  R N
Sbjct: 174 QFKTIPVEFG-QLKNLQELNLDANQLTTIPKEIGQLQNLQTLYLRNN 219



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 7/113 (6%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L + L+N + + +LN+S+  Q L+T P  IG L +L EL +S N+ TTLP  I  L K
Sbjct: 38  RDLTKALQNPLGVRILNLSR--QKLKTFPKEIGQLKNLQELHLSSNQFTTLPKEIEQLEK 95

Query: 177 LQKLSLEGNPLVSPPMDVVE-QGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVK 228
           LQ+L+L  N L++ P ++ + + L  +  YLSE  N     PK+   + KL K
Sbjct: 96  LQELNLWNNQLITLPKEIAQLKNLQEL--YLSE--NQLMTLPKEIGQLEKLQK 144


>gi|326668654|ref|XP_001920812.3| PREDICTED: leucine-rich repeat-containing protein 7-like [Danio
           rerio]
          Length = 1473

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/165 (38%), Positives = 95/165 (57%), Gaps = 3/165 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N L+ +P SIG L +L+ LD++ N +ESL   I  C SLE+L  + N L+QLPD+IG +L
Sbjct: 217 NSLQTIPGSIGKLRQLRYLDLAKNRIESLDADISGCESLEDLLLSANMLQQLPDSIG-KL 275

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
             L TL ++ N++  LP ++  L+ L   D   N L+SLP  +  L +L      +NF  
Sbjct: 276 KKLTTLKVDDNQLTSLPNTIGSLSLLEEFDCSCNELESLPPTIGYLHSLRTFAADENF-- 333

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L  LP  IG   ++  + +  NK+  LPD IG + KL+ L+L  N
Sbjct: 334 LSDLPREIGNCRNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDN 378



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 111/191 (58%), Gaps = 5/191 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE  T +LLN+  L ++   L+ LP + G LSKL++L++  N L+++PK+I     LE 
Sbjct: 130 LPEGFT-QLLNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLSQLER 188

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+  +LP+ +  ++ +LK L ++ N +  +P S+  L  LR LD   N ++SL  
Sbjct: 189 LDLGSNEFSELPEVLE-QIHSLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIESLDA 247

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           D+    +LE L +S N   L+ LP SIG L  L  L V  N++T+LP++IG L  L++  
Sbjct: 248 DISGCESLEDLLLSANM--LQQLPDSIGKLKKLTTLKVDDNQLTSLPNTIGSLSLLEEFD 305

Query: 182 LEGNPLVS-PP 191
              N L S PP
Sbjct: 306 CSCNELESLPP 316



 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 100/186 (53%), Gaps = 8/186 (4%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP +I  L  LK LD+S N ++  P  I+ C+ L 
Sbjct: 59  EELPKQLFNCQALKKLSMPDNDLSNLPTTIASLVNLKELDISKNGIQEFPDNIKCCKCLS 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LP+  GF +L+NL  L +N   +  LP +   L+ LR+L+ R N LK++
Sbjct: 119 VVEASVNPIAKLPE--GFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTM 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N      LP  +  + SL EL +  N + T+P SIG LR+L+ 
Sbjct: 177 PKSIHRLSQLERLDLGSN--EFSELPEVLEQIHSLKELWLDNNSLQTIPGSIGKLRQLRY 234

Query: 180 LSLEGN 185
           L L  N
Sbjct: 235 LDLAKN 240



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 100/187 (53%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL  + +L++  N LK +P SI  LS+L+ LD+  N    LP+ +E   SL+EL  + N
Sbjct: 158 GRLSKLRILELRENHLKTMPKSIHRLSQLERLDLGSNEFSELPEVLEQIHSLKELWLDNN 217

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ +P +IG +L  L+ L +  N+I  L   ++   SL  L    N L+ LP+ +  L 
Sbjct: 218 SLQTIPGSIG-KLRQLRYLDLAKNRIESLDADISGCESLEDLLLSANMLQQLPDSIGKLK 276

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L  L +  N   L +LP +IG L  L E D S N++ +LP +IG L  L+  + + N L
Sbjct: 277 KLTTLKVDDN--QLTSLPNTIGSLSLLEEFDCSCNELESLPPTIGYLHSLRTFAADENFL 334

Query: 188 VSPPMDV 194
              P ++
Sbjct: 335 SDLPREI 341



 Score = 81.6 bits (200), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/137 (40%), Positives = 74/137 (54%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +P+S+  +L  +  L V  NQL  LPN+IG LS L+  D S N LESLP TI    SL 
Sbjct: 267 QLPDSI-GKLKKLTTLKVDDNQLTSLPNTIGSLSLLEEFDCSCNELESLPPTIGYLHSLR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L  LP  IG    N+  +S+  NK+  LP  +  +T LRVL+   N LK+LP
Sbjct: 326 TFAADENFLSDLPREIG-NCRNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L +L  L +S N
Sbjct: 385 FTFTKLKDLAALWLSDN 401



 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 4/115 (3%)

Query: 69  LRQLPDTI-GFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P  I  FE   L+ L ++ N+I  LP+ L +  +L+ L    N L +LP  + +L+
Sbjct: 34  LQQVPKEIFSFERT-LEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSNLPTTIASLV 92

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           NL+ L+IS+N   ++  P +I     L  ++ S N I  LP+    L  L +L L
Sbjct: 93  NLKELDISKNG--IQEFPDNIKCCKCLSVVEASVNPIAKLPEGFTQLLNLTQLFL 145



 Score = 44.3 bits (103), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 40/61 (65%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP+ IG ++KL+VL++S N L++LP T    + L  L  + N+ + 
Sbjct: 346 NVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTKLKDLAALWLSDNQSKA 405

Query: 72  L 72
           L
Sbjct: 406 L 406


>gi|219519899|gb|AAI45499.1| Erbb2ip protein [Mus musculus]
          Length = 1411

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 105/183 (57%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LDVS N +E + + I  C +L++   + N L+QLP+TIG  L
Sbjct: 217 NRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIG-SL 275

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  Y
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHN--Y 333

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q L
Sbjct: 334 LQQLPPEIGNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQL 393

Query: 200 SAV 202
           +A+
Sbjct: 394 TAM 396



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 110/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG LR+L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+S 
Sbjct: 235 LDVSKNNI-----EMVEEGIST 251



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 86/144 (59%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I   RS+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N++T + + N +  LP  + +  ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNMRTFAADHNYLQQLPPEIGNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS ++ +
Sbjct: 201 -EVLEQ-LSGLREF 212



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  L+   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L S+ ELD S+N+I
Sbjct: 254 NLQDFLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLRSIEELDCSFNEI 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  ++  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNMRTFAADHNYLQQLPPEI 341



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 77/137 (56%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++ + L NV  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    ++ 
Sbjct: 267 QLPETIGS-LKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++CNK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-NWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|429961316|gb|ELA40861.1| hypothetical protein VICG_02102 [Vittaforma corneae ATCC 50505]
          Length = 418

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/195 (40%), Positives = 113/195 (57%), Gaps = 11/195 (5%)

Query: 5   SLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNA 64
           ++  +L N+ +L + +N+ + LP+ I  L KL+ L + GN L+ LP  IE   +L+EL+ 
Sbjct: 199 TVIKKLKNLEILCLSNNEFELLPSEIVELEKLQCLYLHGNKLKLLPIEIEGLENLQELDL 258

Query: 65  NFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLE 124
           N N+L  LP  I ++L NLKTL    NK+  LP  +  L  L+ L    N LK LP ++E
Sbjct: 259 NGNELETLPAVI-WKLKNLKTLRFGYNKLETLPVEIVELEKLQFLYLHGNKLKLLPIEIE 317

Query: 125 NLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLR-KLQKLSLE 183
            L NL+ L+++ N   LETLP  IG L +L  L + YNK+ TLP  IG L   LQ L L 
Sbjct: 318 GLENLQELDLNGN--ELETLPLEIGELKNLKTLRLCYNKLETLPVEIGELSGSLQFLDLR 375

Query: 184 GNPLVSPPMDVVEQG 198
           GN       +++E+G
Sbjct: 376 GN-------NILEEG 383



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 80/209 (38%), Positives = 109/209 (52%), Gaps = 26/209 (12%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RL  +  L + +N+LK LP  IG L  L+ LD++GN LE+LP  I    +L+ L+ N N+
Sbjct: 111 RLEKLQCLYLRNNKLKLLPIEIGELKNLQALDLNGNKLETLPAEIGELENLQYLDLNGNE 170

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVI-----------------------LPQSLTHLTS 105
           L  LP  IG EL NL+ L++  NK+ I                       LP  +  L  
Sbjct: 171 LETLPLEIG-ELKNLRYLNLGNNKLGILSTVIKKLKNLEILCLSNNEFELLPSEIVELEK 229

Query: 106 LRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
           L+ L    N LK LP ++E L NL+ L+++ N   LETLP  I  L +L  L   YNK+ 
Sbjct: 230 LQCLYLHGNKLKLLPIEIEGLENLQELDLNGN--ELETLPAVIWKLKNLKTLRFGYNKLE 287

Query: 166 TLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           TLP  I  L KLQ L L GN L   P+++
Sbjct: 288 TLPVEIVELEKLQFLYLHGNKLKLLPIEI 316



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 77/212 (36%), Positives = 109/212 (51%), Gaps = 26/212 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  LD++ N+L+ LP  IG L  L+ LD++GN LE+LP  I   ++L  LN   N
Sbjct: 133 GELKNLQALDLNGNKLETLPAEIGELENLQYLDLNGNELETLPLEIGELKNLRYLNLGNN 192

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  L   I  +L NL+ L ++ N+  +LP  +  L  L+ L    N LK LP ++E L 
Sbjct: 193 KLGILSTVIK-KLKNLEILCLSNNEFELLPSEIVELEKLQCLYLHGNKLKLLPIEIEGLE 251

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQ--------- 178
           NL+ L+++ N   LETLP  I  L +L  L   YNK+ TLP  I  L KLQ         
Sbjct: 252 NLQELDLNGN--ELETLPAVIWKLKNLKTLRFGYNKLETLPVEIVELEKLQFLYLHGNKL 309

Query: 179 --------------KLSLEGNPLVSPPMDVVE 196
                         +L L GN L + P+++ E
Sbjct: 310 KLLPIEIEGLENLQELDLNGNELETLPLEIGE 341



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/191 (39%), Positives = 103/191 (53%), Gaps = 3/191 (1%)

Query: 4   ESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELN 63
           +S   RL+ +  LD+  N L+ LP  IG L  LK+L ++GN L +LP  I     L+ L 
Sbjct: 60  DSDIKRLVKLEKLDLSVNNLETLPPEIGELKDLKMLYLNGNELGTLPPEIRRLEKLQCLY 119

Query: 64  ANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDL 123
              NKL+ LP  IG EL NL+ L +N NK+  LP  +  L +L+ LD   N L++LP ++
Sbjct: 120 LRNNKLKLLPIEIG-ELKNLQALDLNGNKLETLPAEIGELENLQYLDLNGNELETLPLEI 178

Query: 124 ENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLE 183
             L NL  LN+  N   L  L   I  L +L  L +S N+   LP  I  L KLQ L L 
Sbjct: 179 GELKNLRYLNLGNN--KLGILSTVIKKLKNLEILCLSNNEFELLPSEIVELEKLQCLYLH 236

Query: 184 GNPLVSPPMDV 194
           GN L   P+++
Sbjct: 237 GNKLKLLPIEI 247



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/181 (35%), Positives = 100/181 (55%), Gaps = 3/181 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           +D++S  +  + + I  L KL+ LD+S N LE+LP  I   + L+ L  N N+L  LP  
Sbjct: 49  IDIYSQGITSIDSDIKRLVKLEKLDLSVNNLETLPPEIGELKDLKMLYLNGNELGTLPPE 108

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           I   L  L+ L +  NK+ +LP  +  L +L+ LD   N L++LP ++  L NL+ L+++
Sbjct: 109 I-RRLEKLQCLYLRNNKLKLLPIEIGELKNLQALDLNGNKLETLPAEIGELENLQYLDLN 167

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            N   LETLP  IG L +L  L++  NK+  L   I  L+ L+ L L  N     P ++V
Sbjct: 168 GN--ELETLPLEIGELKNLRYLNLGNNKLGILSTVIKKLKNLEILCLSNNEFELLPSEIV 225

Query: 196 E 196
           E
Sbjct: 226 E 226


>gi|124003273|ref|ZP_01688123.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123991371|gb|EAY30802.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 302

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/194 (36%), Positives = 110/194 (56%), Gaps = 4/194 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE +  +L  +  L++  N++K LP SIG L KL++L +  N LE LP+++   ++L+ 
Sbjct: 102 IPEGI-GKLTQLKRLNLAKNKIKALPTSIGQLKKLRLLHMMINHLEQLPESMGTMQNLQV 160

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  ++N+L+ LP  +G +L  L+ +S+  N I  LP  L  LT L  L+   N +K L +
Sbjct: 161 LELDYNQLKSLPAALG-KLQKLRLISVGYNHISALPAQLYQLTQLHKLNLEHNQIKELKK 219

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           D+  + NL  L +S N  +L  LP SI  L  +  L +S NKI T+P  +  ++ L+ L 
Sbjct: 220 DIGQMKNLNALILSNN--HLTQLPESITQLSKMELLVLSNNKIATMPAHLKKMKGLRTLI 277

Query: 182 LEGNPLVSPPMDVV 195
           L GNPL     D +
Sbjct: 278 LVGNPLSKDEKDRI 291



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 101/177 (57%), Gaps = 3/177 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           VL++  N+L  +P  IG L++LK L+++ N +++LP +I   + L  L+   N L QLP+
Sbjct: 91  VLNIRQNKLTDIPEGIGKLTQLKRLNLAKNKIKALPTSIGQLKKLRLLHMMINHLEQLPE 150

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
           ++G  + NL+ L ++ N++  LP +L  L  LR++    N + +LP  L  L  L  LN+
Sbjct: 151 SMG-TMQNLQVLELDYNQLKSLPAALGKLQKLRLISVGYNHISALPAQLYQLTQLHKLNL 209

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
             N   ++ L   IG + +L  L +S N +T LP+SI  L K++ L L  N + + P
Sbjct: 210 EHN--QIKELKKDIGQMKNLNALILSNNHLTQLPESITQLSKMELLVLSNNKIATMP 264



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 99/181 (54%), Gaps = 3/181 (1%)

Query: 14  VVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLP 73
            +L++ +  L+  P  +  L +LK L++  N L     +I     LE LN   NKL  +P
Sbjct: 44  TLLNLRNQALQEAPQGLDKLPQLKFLNLMKNKLTQWHPSIFTLSELEVLNIRQNKLTDIP 103

Query: 74  DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLN 133
           + IG +L  LK L++  NKI  LP S+  L  LR+L   +N L+ LPE +  + NL+VL 
Sbjct: 104 EGIG-KLTQLKRLNLAKNKIKALPTSIGQLKKLRLLHMMINHLEQLPESMGTMQNLQVLE 162

Query: 134 ISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMD 193
           +  ++  L++LP ++G L  L  + V YN I+ LP  +  L +L KL+LE N +     D
Sbjct: 163 L--DYNQLKSLPAALGKLQKLRLISVGYNHISALPAQLYQLTQLHKLNLEHNQIKELKKD 220

Query: 194 V 194
           +
Sbjct: 221 I 221



 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 97/181 (53%), Gaps = 3/181 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L++  N+L     SI  LS+L+VL++  N L  +P+ I     L+ LN   NK++ LP +
Sbjct: 69  LNLMKNKLTQWHPSIFTLSELEVLNIRQNKLTDIPEGIGKLTQLKRLNLAKNKIKALPTS 128

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L  L+ L +  N +  LP+S+  + +L+VL+   N LKSLP  L  L  L +  IS
Sbjct: 129 IG-QLKKLRLLHMMINHLEQLPESMGTMQNLQVLELDYNQLKSLPAALGKLQKLRL--IS 185

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
             + ++  LP  +  L  L +L++ +N+I  L   IG ++ L  L L  N L   P  + 
Sbjct: 186 VGYNHISALPAQLYQLTQLHKLNLEHNQIKELKKDIGQMKNLNALILSNNHLTQLPESIT 245

Query: 196 E 196
           +
Sbjct: 246 Q 246


>gi|327403779|ref|YP_004344617.1| adenylate cyclase [Fluviicola taffensis DSM 16823]
 gi|327319287|gb|AEA43779.1| Adenylate cyclase [Fluviicola taffensis DSM 16823]
          Length = 575

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+  +L  + +L + +N+++ LP S G L  LK L +  N L  LP +  N R L+E
Sbjct: 369 LPESI-GKLNQLELLSMFNNRIRVLPESFGDLESLKYLRIHKNKLTQLPDSFGNLRLLKE 427

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L  LP +I + + NL  L ++ N++  LP S+  L  L  L A +N +K+LP 
Sbjct: 428 LDLSENRLTTLPASIEY-MENLTILVLDNNELTTLPFSIGQLECLTSLSAYINTIKTLPS 486

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L  L NLE LN+S N   ++ LP SI  L SL  LD+S NK +  P  I  L +L+K +
Sbjct: 487 SLGKLKNLENLNLSYN--NIQKLPRSIRHLSSLFVLDISDNKFSRFPKVIFRLHQLKKCN 544

Query: 182 LEGN 185
           LE N
Sbjct: 545 LEEN 548



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/172 (40%), Positives = 97/172 (56%), Gaps = 3/172 (1%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELIN 82
           L  +P SIG LS L+ L V  + L SLP++I     LE L+   N++R LP++ G +L +
Sbjct: 343 LTKIPESIGDLSHLRRLTVPKSGLISLPESIGKLNQLELLSMFNNRIRVLPESFG-DLES 401

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           LK L I+ NK+  LP S  +L  L+ LD   N L +LP  +E + NL +L +  N   L 
Sbjct: 402 LKYLRIHKNKLTQLPDSFGNLRLLKELDLSENRLTTLPASIEYMENLTILVLDNN--ELT 459

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           TLP+SIG L  L  L    N I TLP S+G L+ L+ L+L  N +   P  +
Sbjct: 460 TLPFSIGQLECLTSLSAYINTIKTLPSSLGKLKNLENLNLSYNNIQKLPRSI 511



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 103/188 (54%), Gaps = 4/188 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A+L ++  LD   N L  +P  IG LS LK L+++ N ++ L + +     L +LN   N
Sbjct: 258 AQLSHLKYLDFSENNLTTIPQEIGRLSDLKELNLAFNQIKELSENLGELSKLTKLNLTKN 317

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVI-LPQSLTHLTSLRVLDARLNCLKSLPEDLENL 126
             +QLP+ IG +L  L+ L I  N  +  +P+S+  L+ LR L    + L SLPE +  L
Sbjct: 318 AFQQLPNAIG-QLKLLEELHIGFNDFLTKIPESIGDLSHLRRLTVPKSGLISLPESIGKL 376

Query: 127 INLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
             LE+L++  N   +  LP S G L SL  L +  NK+T LPDS G LR L++L L  N 
Sbjct: 377 NQLELLSMFNN--RIRVLPESFGDLESLKYLRIHKNKLTQLPDSFGNLRLLKELDLSENR 434

Query: 187 LVSPPMDV 194
           L + P  +
Sbjct: 435 LTTLPASI 442



 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 106/233 (45%), Gaps = 15/233 (6%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L + SN +  +P  I  L  LK LD+ GN L++LP +  N   LE L+   NK ++
Sbjct: 68  NLEELHLSSNLIPVIPEEIDKLENLKFLDLKGNSLDNLPASFRNLNKLEHLSIETNKFKE 127

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE- 130
           LPD +   L  L+ L I  N+I  LP+     T+L +L      L S  +  +   NL+ 
Sbjct: 128 LPDELSL-LKKLRILKIRENQIHSLPEFREGFTALSMLYIDDINLSSDWQKYKVYTNLKK 186

Query: 131 -------VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLE 183
                  V ++  + Q+    P        L  L++SY  +   P SI  L  L+ L L 
Sbjct: 187 AKESPSIVYHLDLSVQFTLPRPLDFSSFTELKTLNLSYCDLKEFPMSIMTLTHLEYLHLG 246

Query: 184 GNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGAL 236
            N  +S P ++ +  LS +K YL    NN    P++   +G+L      N A 
Sbjct: 247 RNNFLSVPAEIAQ--LSHLK-YLDFSENNLTTIPQE---IGRLSDLKELNLAF 293



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 54/244 (22%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +IPE +  +L N+  LD+  N L  LP S   L+KL+ L +  N  + LP  +   + L 
Sbjct: 81  VIPEEID-KLENLKFLDLKGNSLDNLPASFRNLNKLEHLSIETNKFKELPDELSLLKKLR 139

Query: 61  ELNANFNKLRQLPD---------TIGFELINLKT------LSINCNKIVILPQSLTHL-- 103
            L    N++  LP+          +  + INL +      +  N  K    P  + HL  
Sbjct: 140 ILKIRENQIHSLPEFREGFTALSMLYIDDINLSSDWQKYKVYTNLKKAKESPSIVYHLDL 199

Query: 104 ---------------TSLRVLDARLNCLKSLPEDLENLINLEVLNISQN----------- 137
                          T L+ L+     LK  P  +  L +LE L++ +N           
Sbjct: 200 SVQFTLPRPLDFSSFTELKTLNLSYCDLKEFPMSIMTLTHLEYLHLGRNNFLSVPAEIAQ 259

Query: 138 ---FQYLE-------TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
               +YL+       T+P  IG L  L EL++++N+I  L +++G L KL KL+L  N  
Sbjct: 260 LSHLKYLDFSENNLTTIPQEIGRLSDLKELNLAFNQIKELSENLGELSKLTKLNLTKNAF 319

Query: 188 VSPP 191
              P
Sbjct: 320 QQLP 323


>gi|124010202|ref|ZP_01694858.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
 gi|123983746|gb|EAY24173.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
          Length = 521

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 119/193 (61%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+S++ +L N+  L++++N L  LP  IG L KL+ L +  N L +LPK+I   ++L++
Sbjct: 115 LPKSIS-KLKNLYRLELNANSLTRLPKGIGKLQKLQRLKIGSNSLRALPKSIGKLQNLKK 173

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    + L++LP +IG +L NLK L +  + +  LP+S+  L +L+ L  R + LK LP+
Sbjct: 174 LILRVDALKKLPKSIG-KLQNLKKLILRADALKKLPKSIGKLQNLKKLILRADALKKLPK 232

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L NL+ L +  +   L+ LP SIG L +L +L +  N++TTLP S+  L KL+K++
Sbjct: 233 SIGKLQNLKKLILRAD--ALKKLPKSIGRLPNLEQLVLQVNRLTTLPKSLSQLPKLKKMT 290

Query: 182 LEGNPLVSPPMDV 194
           L  + L + P  +
Sbjct: 291 LIAHHLRTLPKSI 303



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 103/186 (55%), Gaps = 3/186 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           LN+  L + S+ L  LP SI  L  L  L+++ N L  LPK I   + L+ L    N LR
Sbjct: 100 LNLYSLRIKSDSLIALPKSISKLKNLYRLELNANSLTRLPKGIGKLQKLQRLKIGSNSLR 159

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP +IG +L NLK L +  + +  LP+S+  L +L+ L  R + LK LP+ +  L NL+
Sbjct: 160 ALPKSIG-KLQNLKKLILRVDALKKLPKSIGKLQNLKKLILRADALKKLPKSIGKLQNLK 218

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +  +   L+ LP SIG L +L +L +  + +  LP SIG L  L++L L+ N L + 
Sbjct: 219 KLILRAD--ALKKLPKSIGKLQNLKKLILRADALKKLPKSIGRLPNLEQLVLQVNRLTTL 276

Query: 191 PMDVVE 196
           P  + +
Sbjct: 277 PKSLSQ 282



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/170 (38%), Positives = 94/170 (55%), Gaps = 4/170 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+S+  RL N+  L +  N+L  LP S+  L KLK + +  + L +LPK+I N   LE 
Sbjct: 253 LPKSI-GRLPNLEQLVLQVNRLTTLPKSLSQLPKLKKMTLIAHHLRTLPKSIGNFPELEM 311

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N L  L   IG +   LK L I   +   LPQS+  L +L +L      L +LP+
Sbjct: 312 LELEVNNLVALTPGIG-QFKQLKYLKIVNGQFATLPQSIGDLQNLEMLFLLNVPLTTLPK 370

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
            + NL  L  L I ++   L TLP +I  L +LV L++SYN++T LP+SI
Sbjct: 371 GIGNLKKLRRLQILKS--KLTTLPEAIDNLQNLVLLNLSYNQLTRLPESI 418



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 81/156 (51%), Gaps = 3/156 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L + + Q   LP SIG L  L++L +    L +LPK I N + L  L    +KL  LP+ 
Sbjct: 335 LKIVNGQFATLPQSIGDLQNLEMLFLLNVPLTTLPKGIGNLKKLRRLQILKSKLTTLPEA 394

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           I      +   +++ N++  LP+S+ +L +L  L+   N L   PE L  L  L  LN +
Sbjct: 395 IDNLQNLVLL-NLSYNQLTRLPESIGNLQNLGNLNLSHNQLTQFPESLSKLSGLGTLNAN 453

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
            N   L +LP SIG L  LV L + YN++ TLP S 
Sbjct: 454 HN--QLTSLPKSIGALKGLVYLQLRYNQLKTLPKSF 487



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 75/149 (50%), Gaps = 14/149 (9%)

Query: 46  LESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTS 105
           L+ L   I  C++L+ L  NF +L            NL +L I  + ++ LP+S++ L +
Sbjct: 77  LKDLRGLIIKCKNLKTLPKNFGEL------------NLYSLRIKSDSLIALPKSISKLKN 124

Query: 106 LRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
           L  L+   N L  LP+ +  L  L+ L I  N   L  LP SIG L +L +L +  + + 
Sbjct: 125 LYRLELNANSLTRLPKGIGKLQKLQRLKIGSN--SLRALPKSIGKLQNLKKLILRVDALK 182

Query: 166 TLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LP SIG L+ L+KL L  + L   P  +
Sbjct: 183 KLPKSIGKLQNLKKLILRADALKKLPKSI 211



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 97/164 (59%), Gaps = 5/164 (3%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+S+   L N+ +L + +  L  LP  IG L KL+ L +  + L +LP+ I+N ++L  
Sbjct: 345 LPQSI-GDLQNLEMLFLLNVPLTTLPKGIGNLKKLRRLQILKSKLTTLPEAIDNLQNLVL 403

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN ++N+L +LP++I   L NL  L+++ N++   P+SL+ L+ L  L+A  N L SLP+
Sbjct: 404 LNLSYNQLTRLPESI-GNLQNLGNLNLSHNQLTQFPESLSKLSGLGTLNANHNQLTSLPK 462

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
            +  L  L  L +  N   L+TLP S   L  L+ L +++NK +
Sbjct: 463 SIGALKGLVYLQLRYN--QLKTLPKSFYKL-DLINLYIAHNKFS 503



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 3/112 (2%)

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           ++T+ +  + ++ L   ++ L  LR L  +   LK+LP++   L NL  L I  +   L 
Sbjct: 57  IETMVLYGDNVINLSPRISELKDLRGLIIKCKNLKTLPKNFGEL-NLYSLRIKSD--SLI 113

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LP SI  L +L  L+++ N +T LP  IG L+KLQ+L +  N L + P  +
Sbjct: 114 ALPKSISKLKNLYRLELNANSLTRLPKGIGKLQKLQRLKIGSNSLRALPKSI 165


>gi|351711953|gb|EHB14872.1| Protein LAP2 [Heterocephalus glaber]
          Length = 1405

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+T+G  L
Sbjct: 217 NRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETVG-SL 275

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  Y
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLISVEELDCSFNEIEALPSSVGQLTNIRTFAADHN--Y 333

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q L
Sbjct: 334 LQQLPGEIGNWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQL 393

Query: 200 SAV 202
           +A+
Sbjct: 394 TAM 396



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 106/187 (56%), Gaps = 10/187 (5%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L  + A+ N + +LPD 
Sbjct: 74  LSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPD- 132

Query: 76  IGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            GF +L+NL  L +N   +  LP +   LT L++L+ R N LK LP+ +  L  LE L++
Sbjct: 133 -GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDL 191

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N ++ E +P  +  L  L E  +  N++T +P  IG L++L  L +  N +     ++
Sbjct: 192 GSN-EFTE-VPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNI-----EM 244

Query: 195 VEQGLSA 201
           VE+G+SA
Sbjct: 245 VEEGISA 251



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTA 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N+I
Sbjct: 254 NLQDLLLSSNSLQQLPETVGSLKNVTTLKIDEN--QLMYLPDSIGGLISVEELDCSFNEI 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP S+G L  ++  + + N L   P ++
Sbjct: 312 EALPSSVGQLTNIRTFAADHNYLQQLPGEI 341



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 98/167 (58%), Gaps = 4/167 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+ E ++A   N+  L + SN L+ LP ++G L  +  L +  N L  LP +I    S+E
Sbjct: 244 MVEEGISA-CENLQDLLLSSNSLQQLPETVGSLKNVTTLKIDENQLMYLPDSIGGLISVE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP ++G +L N++T + + N +  LP  + +  ++ VL    N L++LP
Sbjct: 303 ELDCSFNEIEALPSSVG-QLTNIRTFAADHNYLQQLPGEIGNWKNVTVLFLHSNKLETLP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+++ L
Sbjct: 362 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQVSIL 406


>gi|418727702|ref|ZP_13286290.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409959060|gb|EKO22837.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 378

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 107/184 (58%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL +   +LK LP  IG L  L++L++S N L  LPK I   ++L+EL  N+N+ +
Sbjct: 47  LDVRVLILSEQKLKALPEKIGQLKNLQMLNLSDNQLIILPKEIRQLKNLQELFLNYNQFK 106

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
             P  I  +L +L  L ++ N++ ILP  +  L +L+ L+   N LK++ +++E L NL+
Sbjct: 107 TFPKEIE-QLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQ 165

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +  N   L   P  IG L +L  L +S N++TT P  IG L+ LQ+L L  N L + 
Sbjct: 166 KLYLDNN--QLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTF 223

Query: 191 PMDV 194
           P ++
Sbjct: 224 PKEI 227



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 106/186 (56%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L + +NQL   P  IG L  LK L +S N L + PK I   ++L+EL  + N+
Sbjct: 160 QLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQ 219

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L   P  IG +L  L+ L +  N++  +P  +  L  L+ L+  +N L ++P+++  L N
Sbjct: 220 LTTFPKEIG-KLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQN 278

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+VL +S N    +T+P   G L +L  L +  N++T LP  IG L+ L+ L+L+ N L+
Sbjct: 279 LQVLFLSYN--QFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLI 336

Query: 189 SPPMDV 194
           + P ++
Sbjct: 337 TIPKEI 342



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 111/193 (57%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L N+ +L++  NQL  LP  I  L  L+ L ++ N  ++ PK IE  +SL +
Sbjct: 62  LPEKI-GQLKNLQMLNLSDNQLIILPKEIRQLKNLQELFLNYNQFKTFPKEIEQLKSLHK 120

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+L  LP  IG +L NL+ L++  N++  + + +  L +L+ L    N L + P+
Sbjct: 121 LYLSNNQLTILPVEIG-QLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPK 179

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L NL+ L +S N   L T P  IG L +L EL +S N++TT P  IG L+KLQ L 
Sbjct: 180 EIGKLQNLKSLFLSNN--QLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLG 237

Query: 182 LEGNPLVSPPMDV 194
           L  N L + P ++
Sbjct: 238 LGDNQLTTIPNEI 250



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 99/178 (55%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + +NQL   P  IG L  L+ L +S N L + PK I   + L+ L    N
Sbjct: 182 GKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDN 241

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P+ IG +L  L+ L+++ N++  +P+ +  L +L+VL    N  K++P +   L 
Sbjct: 242 QLTTIPNEIG-KLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLK 300

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL++L++  N   L  LP  IG L +L  L++  N++ T+P  IG L+ LQ L L  N
Sbjct: 301 NLKMLSLDAN--QLTALPKEIGKLKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNN 356



 Score = 77.0 bits (188), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 88/158 (55%), Gaps = 3/158 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + +NQL   P  IG L KL+ L +  N L ++P  I   + L+ELN + N
Sbjct: 205 GKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVN 264

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  IG +L NL+ L ++ N+   +P     L +L++L    N L +LP+++  L 
Sbjct: 265 QLTTIPKEIG-QLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLK 323

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
           NL++LN+  N   L T+P  IG L +L  L +  N+ +
Sbjct: 324 NLKMLNLDAN--QLITIPKEIGQLQNLQTLYLRNNQFS 359



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 2/94 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L N+ VL +  NQ K +P   G L  LK+L +  N L +LPK I   ++L+ 
Sbjct: 269 IPKEI-GQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKM 327

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           LN + N+L  +P  IG +L NL+TL +  N+  I
Sbjct: 328 LNLDANQLITIPKEIG-QLQNLQTLYLRNNQFSI 360



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 65/124 (52%), Gaps = 6/124 (4%)

Query: 75  TIGF-ELINLKTLSINCNKIVI---LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
           TIGF  L+NL      C +  I   L ++  +   +RVL      LK+LPE +  L NL+
Sbjct: 14  TIGFLFLMNLSCEIQACEEPGIYRDLTKAFQNPLDVRVLILSEQKLKALPEKIGQLKNLQ 73

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
           +LN+S N   L  LP  I  L +L EL ++YN+  T P  I  L+ L KL L  N L   
Sbjct: 74  MLNLSDN--QLIILPKEIRQLKNLQELFLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTIL 131

Query: 191 PMDV 194
           P+++
Sbjct: 132 PVEI 135


>gi|348685802|gb|EGZ25617.1| hypothetical protein PHYSODRAFT_479275 [Phytophthora sojae]
          Length = 1187

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 109/196 (55%), Gaps = 6/196 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A+L N+  L++  N L  LP+ IG ++ L+ L+   N L SLP  + N   + ELN   N
Sbjct: 684 AQLKNLRSLNLSFNALSTLPDGIGAVTNLQELNFKSNALGSLPAALNNLSEIVELNGENN 743

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP   G +   ++ L ++ N++  LP +L  + SLR L    N + +LP +L  LI
Sbjct: 744 ALQWLPTGCGEKWGLMEVLRLSHNRLSALPVTLGLMHSLRTLQLSNNRITALPLELGALI 803

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  L++S N   L ++P  +G L SL  +D+S+N++   P +I  L  L++L    N L
Sbjct: 804 HLRELDVSWN--QLTSIPDELGCLESLTTIDLSHNRLAKFPITIAMLTSLKRLRCSHNAL 861

Query: 188 VSPPMDVVEQGLSAVK 203
           V+P    ++ GL A+K
Sbjct: 862 VTP----LDSGLGALK 873



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 109/228 (47%), Gaps = 29/228 (12%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-------- 53
           +P ++   L ++  LD+ +N+LK +P  IG    L++LD   N L + P  +        
Sbjct: 536 LPGAIFTHLFSLQSLDISNNELKGIPEEIGEARDLQLLDARSNRLITTPAALTNLHELRV 595

Query: 54  ------------ENC---RSLEELNANFNKLRQLPDTIGFELINLKTLSINCN-KIVILP 97
                       +NC    SLEELN   N L  L D IG  L+ L  L++  N  +  LP
Sbjct: 596 LHLAYNCLVKFGDNCNGLHSLEELNLASNALEVLADGIGDSLVKLARLNLRGNPSLKRLP 655

Query: 98  QSLTHLTSLRVLDARLNCLKSLPEDL--ENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
            SL  L +L + D  +   K L +D+    L NL  LN+S  F  L TLP  IG + +L 
Sbjct: 656 NSLQQLHNLSIWDLSVCDQKRLGKDVFGAQLKNLRSLNLS--FNALSTLPDGIGAVTNLQ 713

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQ-GLSAV 202
           EL+   N + +LP ++  L ++ +L+ E N L   P    E+ GL  V
Sbjct: 714 ELNFKSNALGSLPAALNNLSEIVELNGENNALQWLPTGCGEKWGLMEV 761



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 93/202 (46%), Gaps = 33/202 (16%)

Query: 19  HSNQLKCLPNSIGC-LSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
             NQL+ LP +I   L  L+ LD+S N L+ +P+ I   R L+ L+A  N+L   P    
Sbjct: 529 SRNQLQDLPGAIFTHLFSLQSLDISNNELKGIPEEIGEARDLQLLDARSNRLITTPAA-- 586

Query: 78  FELINLKTLSI-------------NCNKIVILPQSLTHLTSLRVLD----------ARLN 114
             L NL  L +             NCN +  L +      +L VL           ARLN
Sbjct: 587 --LTNLHELRVLHLAYNCLVKFGDNCNGLHSLEELNLASNALEVLADGIGDSLVKLARLN 644

Query: 115 -----CLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPD 169
                 LK LP  L+ L NL + ++S   Q           L +L  L++S+N ++TLPD
Sbjct: 645 LRGNPSLKRLPNSLQQLHNLSIWDLSVCDQKRLGKDVFGAQLKNLRSLNLSFNALSTLPD 704

Query: 170 SIGCLRKLQKLSLEGNPLVSPP 191
            IG +  LQ+L+ + N L S P
Sbjct: 705 GIGAVTNLQELNFKSNALGSLP 726



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 12/171 (7%)

Query: 24  KCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANF-------NKLRQLPDTI 76
           + +    GC     V+D+ G  L++LP  + + R      ++        N+L+ LP  I
Sbjct: 483 RIIRRKAGCGDD--VVDMRGRGLKNLPYDLYHGRDALASLSSLLILDISRNQLQDLPGAI 540

Query: 77  GFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQ 136
              L +L++L I+ N++  +P+ +     L++LDAR N L + P  L NL  L VL+++ 
Sbjct: 541 FTHLFSLQSLDISNNELKGIPEEIGEARDLQLLDARSNRLITTPAALTNLHELRVLHLAY 600

Query: 137 NFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG-CLRKLQKLSLEGNP 186
           N   L     +   L SL EL+++ N +  L D IG  L KL +L+L GNP
Sbjct: 601 NC--LVKFGDNCNGLHSLEELNLASNALEVLADGIGDSLVKLARLNLRGNP 649



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 77/154 (50%), Gaps = 26/154 (16%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L+++  LDV  NQL  +P+ +GCL  L  +D+S N L   P TI    SL+ L  + N L
Sbjct: 802 LIHLRELDVSWNQLTSIPDELGCLESLTTIDLSHNRLAKFPITIAMLTSLKRLRCSHNAL 861

Query: 70  -RQLPDTIG----------------------FELINLKTLSINCNKIVILPQSLT-HLTS 105
              L   +G                      +EL  ++ L+++ N+I +LP+ +  H  +
Sbjct: 862 VTPLDSGLGALKSLRYVDLAANQLTELEPCLYELPQVEVLNLHGNRISMLPREMAQHCGA 921

Query: 106 LRVLDARLNCLKSLPEDLEN--LINLEVLNISQN 137
           LR LD   N L++LP +L +  L  LEVL I +N
Sbjct: 922 LRKLDLYSNNLRALPLELASGLLTQLEVLEIGRN 955



 Score = 37.4 bits (85), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 6/90 (6%)

Query: 108 VLDARLNCLKSLPEDLEN-----LINLEVLNISQNFQYLETLPYSI-GLLMSLVELDVSY 161
           V+D R   LK+LP DL +          +L +  +   L+ LP +I   L SL  LD+S 
Sbjct: 495 VVDMRGRGLKNLPYDLYHGRDALASLSSLLILDISRNQLQDLPGAIFTHLFSLQSLDISN 554

Query: 162 NKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           N++  +P+ IG  R LQ L    N L++ P
Sbjct: 555 NELKGIPEEIGEARDLQLLDARSNRLITTP 584


>gi|359726824|ref|ZP_09265520.1| leucine-rich repeat-containing protein [Leptospira weilii str.
           2006001855]
          Length = 348

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/186 (40%), Positives = 107/186 (57%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  LD++ N+LK LPN IG L  LK L++SGN L  LP +I   ++LE L    N+
Sbjct: 84  QLQNLATLDLYENKLKVLPNEIGKLENLKELNLSGNQLTVLPPSIGQLQNLEILELFRNQ 143

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP+ I   L +L+ L++  N+I  LP+ ++ L++L  LD   N +K L  D + L N
Sbjct: 144 LATLPEEI-VGLKSLQILNLFENEIKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQN 202

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ LN+  N   LE  P  I  L SL  L+++YN+   LP+ I  L  LQ L L GN L 
Sbjct: 203 LKSLNLLDN--KLENFPADIVQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLT 260

Query: 189 SPPMDV 194
           S P  +
Sbjct: 261 SLPEGI 266



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 112/185 (60%), Gaps = 3/185 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L +  N+L  +P  IG L  L+ L ++ N L+++P  IE  ++L  L+   NKL+ 
Sbjct: 41  NLEKLILFGNRLTAIPKEIGKLRNLETLILAENRLKTIPNEIEQLQNLATLDLYENKLKV 100

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ IG +L NLK L+++ N++ +LP S+  L +L +L+   N L +LPE++  L +L++
Sbjct: 101 LPNEIG-KLENLKELNLSGNQLTVLPPSIGQLQNLEILELFRNQLATLPEEIVGLKSLQI 159

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LN+ +N   +++LP  I  L +L+ LD+  NKI  L      L+ L+ L+L  N L + P
Sbjct: 160 LNLFEN--EIKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENFP 217

Query: 192 MDVVE 196
            D+V+
Sbjct: 218 ADIVQ 222



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 113/195 (57%), Gaps = 6/195 (3%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+  +L N+ +L++  NQL  LP  I  L  L++L++  N ++SLPK I    +L 
Sbjct: 123 VLPPSI-GQLQNLEILELFRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEISQLSNLI 181

Query: 61  ELNANFNKLRQLPDTIGFE-LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            L+   NK+++L  ++ F+ L NLK+L++  NK+   P  +  L SL  L+   N  K L
Sbjct: 182 WLDLGKNKIKRL--SLDFKRLQNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYNRFKIL 239

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++  L NL+VL ++ N   L +LP  IG L  L  L +  N++TTLP  I  LR L+ 
Sbjct: 240 PEEILQLENLQVLELTGN--QLTSLPEGIGRLEKLESLFLEGNRLTTLPKGIEHLRSLKI 297

Query: 180 LSLEGNPLVSPPMDV 194
           + LE N L + P ++
Sbjct: 298 VHLEQNRLTAIPEEI 312



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/177 (38%), Positives = 104/177 (58%), Gaps = 7/177 (3%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           +H+N  K L N     S++++LDVS   LE+LP+ I   ++LE+L    N+L  +P  IG
Sbjct: 5   IHNNLEKSLQNP----SEVRILDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEIG 60

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
            +L NL+TL +  N++  +P  +  L +L  LD   N LK LP ++  L NL+ LN+S N
Sbjct: 61  -KLRNLETLILAENRLKTIPNEIEQLQNLATLDLYENKLKVLPNEIGKLENLKELNLSGN 119

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
              L  LP SIG L +L  L++  N++ TLP+ I  L+ LQ L+L  N + S P ++
Sbjct: 120 --QLTVLPPSIGQLQNLEILELFRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEI 174



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 82/153 (53%), Gaps = 23/153 (15%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++L N++ LD+  N++K L      L  LK L++  N LE+ P  I   +SLE LN N+N
Sbjct: 175 SQLSNLIWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYN 234

Query: 68  KLRQLPDTI------------GFELINL----------KTLSINCNKIVILPQSLTHLTS 105
           + + LP+ I            G +L +L          ++L +  N++  LP+ + HL S
Sbjct: 235 RFKILPEEILQLENLQVLELTGNQLTSLPEGIGRLEKLESLFLEGNRLTTLPKGIEHLRS 294

Query: 106 LRVLDARLNCLKSLPEDLENLINLEVLNISQNF 138
           L+++    N L ++PE++ +L NL+ L + Q+F
Sbjct: 295 LKIVHLEQNRLTAIPEEIGSLQNLKELYL-QDF 326



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 55/86 (63%), Gaps = 2/86 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++PE +  +L N+ VL++  NQL  LP  IG L KL+ L + GN L +LPK IE+ RSL+
Sbjct: 238 ILPEEI-LQLENLQVLELTGNQLTSLPEGIGRLEKLESLFLEGNRLTTLPKGIEHLRSLK 296

Query: 61  ELNANFNKLRQLPDTIGFELINLKTL 86
            ++   N+L  +P+ IG  L NLK L
Sbjct: 297 IVHLEQNRLTAIPEEIG-SLQNLKEL 321


>gi|118088954|ref|XP_419907.2| PREDICTED: leucine-rich repeat-containing protein 1 [Gallus gallus]
          Length = 473

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/186 (40%), Positives = 105/186 (56%), Gaps = 4/186 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP+++   + LEE
Sbjct: 69  LPESF-PELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQRLEE 127

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+L  LP+TIG  L NLK L ++ N++  +PQ + +L +L  LD   N L+ LPE
Sbjct: 128 LDLGNNELYHLPETIG-ALFNLKDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLECLPE 186

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L  L +SQN   L+ LP  IG L  L  L V  NK+  L DSIG    L +L 
Sbjct: 187 EINGLTSLTDLLVSQNL--LQVLPDGIGKLRKLSILKVDQNKLIQLTDSIGDCESLTELV 244

Query: 182 LEGNPL 187
           L  N L
Sbjct: 245 LTENQL 250



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 102/184 (55%), Gaps = 5/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +   L N++ LDV  N+L+CLP  I  L+ L  L VS NLL+ LP  I   R L  
Sbjct: 161 IPQEV-GNLKNLLCLDVSENKLECLPEEINGLTSLTDLLVSQNLLQVLPDGIGKLRKLSI 219

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + NKL QL D+IG +  +L  L +  N++ ILP+S+  L  L  L+A  N L SLP+
Sbjct: 220 LKVDQNKLIQLTDSIG-DCESLTELVLTENQLQILPKSIGKLKKLNNLNADRNKLTSLPK 278

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++    +L V ++  N   L  +P  I     L  LDV+ N++T LP S+  L KL+ L 
Sbjct: 279 EIGGCCSLNVFSVRDN--RLSRIPSEISQATELHVLDVAGNRLTYLPISLTTL-KLKALW 335

Query: 182 LEGN 185
           L  N
Sbjct: 336 LSDN 339



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 101/204 (49%), Gaps = 26/204 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LD+  N +  +P SI     L+V D SGN L  LP++    ++L  L+ N  
Sbjct: 28  ANFMQLVELDLSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDI 87

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE------ 121
            L+ LP+ IG  L NL +L +  N +  LP+SL  L  L  LD   N L  LPE      
Sbjct: 88  SLQALPENIG-NLYNLASLELRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGALF 146

Query: 122 -----------------DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                            ++ NL NL  L++S+N   LE LP  I  L SL +L VS N +
Sbjct: 147 NLKDLWLDGNQLAEIPQEVGNLKNLLCLDVSEN--KLECLPEEINGLTSLTDLLVSQNLL 204

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLV 188
             LPD IG LRKL  L ++ N L+
Sbjct: 205 QVLPDGIGKLRKLSILKVDQNKLI 228



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 109/198 (55%), Gaps = 5/198 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L+ +  L +  N+++ LP  I    +L  LD+S N +  +P++I  C++L+  + + N 
Sbjct: 6   QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKALQVADFSGNP 65

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L +LP++   EL NL  LS+N   +  LP+++ +L +L  L+ R N L  LPE L  L  
Sbjct: 66  LTRLPESFP-ELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQR 124

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           LE L++  N  Y   LP +IG L +L +L +  N++  +P  +G L+ L  L +  N L 
Sbjct: 125 LEELDLGNNELY--HLPETIGALFNLKDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLE 182

Query: 189 SPPMDVVEQGLSAVKGYL 206
             P ++   GL+++   L
Sbjct: 183 CLPEEI--NGLTSLTDLL 198



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 73/163 (44%), Gaps = 48/163 (29%)

Query: 78  FELINLKTLSINCNKIVIL-----------------------PQSLTHLTSLRVLD---- 110
           F+L+ L+ L ++ N+I  L                       P+S++   +L+V D    
Sbjct: 5   FQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKALQVADFSGN 64

Query: 111 ------------ARLNC-------LKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLL 151
                         L C       L++LPE++ NL NL  L + +N   L  LP S+  L
Sbjct: 65  PLTRLPESFPELQNLTCLSVNDISLQALPENIGNLYNLASLELRENL--LTYLPESLAQL 122

Query: 152 MSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             L ELD+  N++  LP++IG L  L+ L L+GN L   P +V
Sbjct: 123 QRLEELDLGNNELYHLPETIGALFNLKDLWLDGNQLAEIPQEV 165


>gi|417766867|ref|ZP_12414816.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400350673|gb|EJP02931.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 288

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/181 (40%), Positives = 107/181 (59%), Gaps = 6/181 (3%)

Query: 12  NVVVLDVHSNQ---LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +V+VL+   N+   LK LP  IG L  LK L +S N + +LP  I N ++L+ L+ N N+
Sbjct: 48  DVLVLNYRDNEENPLKILPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNR 107

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  +P  IG  L NLK LSI  NK+  LP+ + +L +L+ L    N LK LP+++ NL  
Sbjct: 108 LETIPKEIG-NLKNLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRK 166

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ +++S N   L  LP  I  L SL+E+ +  N+ TTLP  IG L+ L+ L L  N L+
Sbjct: 167 LQRMHLSTN--ELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLI 224

Query: 189 S 189
           S
Sbjct: 225 S 225



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 110/188 (58%), Gaps = 3/188 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L + +N++  LP  IG L  L+VL ++GN LE++PK I N ++L+EL+  +N
Sbjct: 70  GNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWN 129

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL+ LP  IG  L NLK L ++ N++ ILPQ + +L  L+ +    N L  LP++++NL 
Sbjct: 130 KLQTLPKEIG-NLKNLKELYLSRNQLKILPQEIGNLRKLQRMHLSTNELTKLPQEIKNLE 188

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  + +  N     TLP  IG L +L  L +  N++ +L   IG L+ L++L LE N L
Sbjct: 189 SLLEIYLYDN--QFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELYLEENQL 246

Query: 188 VSPPMDVV 195
              P  + 
Sbjct: 247 TMLPKQIA 254



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 112/190 (58%), Gaps = 3/190 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+ VL ++ N+L+ +P  IG L  LK L +  N L++LPK I N ++L+EL  + N
Sbjct: 93  GNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTLPKEIGNLKNLKELYLSRN 152

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG  L  L+ + ++ N++  LPQ + +L SL  +    N   +LP+++ NL 
Sbjct: 153 QLKILPQEIG-NLRKLQRMHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLK 211

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L + +N Q +  LP  IG L +L EL +  N++T LP  I  L++L +LSL+GN  
Sbjct: 212 NLRNLVLGRN-QLISLLP-EIGNLKNLKELYLEENQLTMLPKQIAALKQLARLSLKGNQF 269

Query: 188 VSPPMDVVEQ 197
            S   + +++
Sbjct: 270 PSEEKERIQR 279



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 53/85 (62%), Gaps = 2/85 (2%)

Query: 110 DARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPD 169
           D   N LK LP+++ NL NL+ L +S N   + TLP  IG L +L  L ++ N++ T+P 
Sbjct: 56  DNEENPLKILPKEIGNLQNLKELYLSAN--EITTLPPEIGNLKNLQVLSLNGNRLETIPK 113

Query: 170 SIGCLRKLQKLSLEGNPLVSPPMDV 194
            IG L+ L++LS+E N L + P ++
Sbjct: 114 EIGNLKNLKELSIEWNKLQTLPKEI 138



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 131 VLNISQNFQY-LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           VLN   N +  L+ LP  IG L +L EL +S N+ITTLP  IG L+ LQ LSL GN L +
Sbjct: 51  VLNYRDNEENPLKILPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLET 110

Query: 190 PPMDV 194
            P ++
Sbjct: 111 IPKEI 115


>gi|432116060|gb|ELK37190.1| Leucine-rich repeat-containing protein 40 [Myotis davidii]
          Length = 561

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/213 (38%), Positives = 117/213 (54%), Gaps = 30/213 (14%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P S ++ L ++V L++ SNQLK LP  I  + +LK LD + NLLES+P  +    SLE 
Sbjct: 148 VPASFSS-LSSLVRLNLSSNQLKNLPAEISGMKRLKHLDCNSNLLESIPSELAGMESLEL 206

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVIL-PQSLTHLTSLRVLDARLNCLKSLP 120
           L    NKLR LP+    +L  LK L +  N+I +L  + L HL S+ VLD R N LKS+P
Sbjct: 207 LYLRRNKLRFLPEFPSCKL--LKELHLGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVP 264

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           ++                         I LL SL  LD+S N I++LP S+G L  L+ L
Sbjct: 265 DE-------------------------ITLLQSLERLDLSNNDISSLPYSLGKLH-LKFL 298

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNND 213
           +LEGNP+ +   +++ +G   V  YL  K+ +D
Sbjct: 299 ALEGNPMRTIRREIINKGTQEVLKYLRSKIKDD 331



 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 92/178 (51%), Gaps = 26/178 (14%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           + +N+L+ L + +  L  L VLD+  N L SLP  I    +L++LN + NKL+       
Sbjct: 48  ISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLK------- 100

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
                            ILP+ +T+L +L+ L  + N L S+PE  E L NLE L+IS N
Sbjct: 101 -----------------ILPEEITNLRNLKGLYLQHNELTSIPEGFEQLFNLEDLDISNN 143

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
              L T+P S   L SLV L++S N++  LP  I  +++L+ L    N L S P ++ 
Sbjct: 144 --CLTTVPASFSSLSSLVRLNLSSNQLKNLPAEISGMKRLKHLDCNSNLLESIPSELA 199



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 33/211 (15%)

Query: 29  SIGCLSKLKVLDVSGNLLESLPKTIENCRS---LEELNANFNKLRQLPDTIGFELINLKT 85
           ++  +  LK+LD S      +P  + +      +  +N + N+L ++P  I    I LK 
Sbjct: 353 NVHAIITLKILDYSDKQTTLIPDEVFDAVKSNIVTSINFSKNQLCEIPKRI----IELKE 408

Query: 86  L----SINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN---- 137
           +    ++  NK+ ++   L  L  L  LD R N L SLPE++E+LI L+ +N+S N    
Sbjct: 409 MVSDVNLGFNKLSLISLELCMLQKLSFLDLRNNFLNSLPEEMESLIRLQTINLSFNRFKI 468

Query: 138 -------FQYLETL-----------PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
                     LET+           P  + ++ +LV LD+  N +  +P  +G    L+ 
Sbjct: 469 LPEVLYRISTLETILISNNQVGSVNPEKLKIMENLVTLDLQNNDLLQIPPELGNCVNLRT 528

Query: 180 LSLEGNPLVSPPMDVVEQGLSAVKGYLSEKM 210
           L L+GNP   P   ++ +G +A+  YL +++
Sbjct: 529 LLLDGNPFRVPRAAILMKGTAAILEYLRDRI 559



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 61/114 (53%), Gaps = 2/114 (1%)

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
           +E  +L  L I+ NK+  L   L  L +L VLD   N L SLP  +  L NL+ LN+S N
Sbjct: 38  WEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHN 97

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
              L+ LP  I  L +L  L + +N++T++P+    L  L+ L +  N L + P
Sbjct: 98  --KLKILPEEITNLRNLKGLYLQHNELTSIPEGFEQLFNLEDLDISNNCLTTVP 149



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 65/113 (57%), Gaps = 2/113 (1%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +   +  L KL  LD+  N L SLP+ +E+   L+ +N +FN+ + LP+ + + +
Sbjct: 418 NKLSLISLELCMLQKLSFLDLRNNFLNSLPEEMESLIRLQTINLSFNRFKILPEVL-YRI 476

Query: 81  INLKTLSINCNKI-VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
             L+T+ I+ N++  + P+ L  + +L  LD + N L  +P +L N +NL  L
Sbjct: 477 STLETILISNNQVGSVNPEKLKIMENLVTLDLQNNDLLQIPPELGNCVNLRTL 529


>gi|421119264|ref|ZP_15579588.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347894|gb|EKO98745.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 526

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 105/184 (57%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL++   +L  LP  IG L  L+ L++  NLL  LPK I    +L+EL+   N+L 
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLA 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
             P  I  EL  L++L ++ N+++ILP  +  L +L+ L    N L + P+++  L NL+
Sbjct: 108 TFPAVI-VELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +S+N   L  LP  IG L +L  LD+  N+ TTLP  IG L+ LQ L+L  N L   
Sbjct: 167 KLWLSEN--RLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLVNNRLTVF 224

Query: 191 PMDV 194
           P ++
Sbjct: 225 PKEI 228



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 101/183 (55%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L+++      LP  I  L  LK L +  N L+++P  I   ++LE LN   N+L +
Sbjct: 308 NLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELER 367

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ LS++ N + I P  +  L  L+ LD  +N   + P+++  L NL+ 
Sbjct: 368 LPKEIG-QLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQT 426

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LN+ +N   L  L   I  L +L ELD++ N+ T LP  IG L+KLQ L L  N L + P
Sbjct: 427 LNLQRN--QLTNLTAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP 484

Query: 192 MDV 194
            ++
Sbjct: 485 TEI 487



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 103/180 (57%), Gaps = 3/180 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +RL N+  L +  N LK +P+ IG L  L+ L++  N LE LPK I   R+L++L+ + N
Sbjct: 327 SRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQN 386

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+  P  I  +L  L+ L ++ N+    P+ +  L +L+ L+ + N L +L  ++E L 
Sbjct: 387 TLKIFPAEIE-QLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIEQLK 445

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L+++ N      LP  IG L  L  LD+  N++TTLP  IG L+ LQ L L+ N L
Sbjct: 446 NLQELDLNDN--QFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQL 503



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 102/190 (53%), Gaps = 9/190 (4%)

Query: 4   ESLTA------RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCR 57
           E LTA      +L N+  L++  N L  LP  IG L  L+ LD+  N L + P  I   +
Sbjct: 58  EKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPAVIVELQ 117

Query: 58  SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK 117
            LE L+ + N+L  LP+ IG  L NL+ L +  NK+   P+ +  L +L+ L    N L 
Sbjct: 118 KLESLDLSENRLIILPNEIG-RLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLT 176

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
           +LP+++  L NL+ L++  N     TLP  IG L +L  L++  N++T  P  IG L+ L
Sbjct: 177 ALPKEIGQLKNLQTLDLQDN--QFTTLPKEIGQLQNLQTLNLVNNRLTVFPKEIGQLQNL 234

Query: 178 QKLSLEGNPL 187
           Q L L  NPL
Sbjct: 235 QDLELLMNPL 244



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/173 (35%), Positives = 95/173 (54%), Gaps = 8/173 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  NQL   P  I  L KL+ LD+S N L  LP  I   ++L++L    N
Sbjct: 91  GQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKN 150

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL   P  IG +L NL+ L ++ N++  LP+ +  L +L+ LD + N   +LP+++  L 
Sbjct: 151 KLTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQ 209

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           NL+ LN+  N   L   P  IG L +L +L++  N     P S+   +++QKL
Sbjct: 210 NLQTLNLVNN--RLTVFPKEIGQLQNLQDLELLMN-----PLSLKERKRIQKL 255



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 107/237 (45%), Gaps = 51/237 (21%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  L ++ N+L   P  IG L  L+ L +S N L +LPK I   ++L+ L+   N
Sbjct: 137 GRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDN 196

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL---------KS 118
           +   LP  IG +L NL+TL++  N++ + P+ +  L +L+ L+  +N L         K 
Sbjct: 197 QFTTLPKEIG-QLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKL 255

Query: 119 LPE---DLENL---------------------INLEVLNISQNFQYL------------- 141
            P+   DL  +                     ++LE  + SQ+F  +             
Sbjct: 256 FPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLY 315

Query: 142 ----ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
                TLP  I  L +L  L +  N +  +P  IG L+ L+ L+LE N L   P ++
Sbjct: 316 DCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEI 372



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 116/278 (41%), Gaps = 61/278 (21%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +  N+L  LP  IG L  L+ LD+  N   +LPK I   ++L+ LN   N
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLVNN 219

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVI-------------------------------- 95
           +L   P  IG +L NL+ L +  N + +                                
Sbjct: 220 RLTVFPKEIG-QLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLA 278

Query: 96  --------------------LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
                                P+ +    +LR L+       +LP+++  L NL+ L + 
Sbjct: 279 QEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALG 338

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            N   L+ +P  IG L +L  L++  N++  LP  IG LR LQKLSL  N L   P + +
Sbjct: 339 LN--GLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAE-I 395

Query: 196 EQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFN 233
           EQ     K  LS  +N     PK+   +GKL    T N
Sbjct: 396 EQLKKLQKLDLS--VNQFTTFPKE---IGKLENLQTLN 428



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + L + L+N +++ VLN+S   + L  LP  IG L +L EL++ +N +T LP  IG L  
Sbjct: 38  RDLTKALQNPLDVRVLNLSG--EKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLEN 95

Query: 177 LQKLSLEGNPLVSPPMDVVE 196
           LQ+L L  N L + P  +VE
Sbjct: 96  LQELDLRDNQLATFPAVIVE 115


>gi|456984028|gb|EMG20190.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 229

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/170 (38%), Positives = 96/170 (56%), Gaps = 3/170 (1%)

Query: 25  CLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLK 84
            LP  I  L  LK L +  N L+++P  I   ++LE LN   N+L +LP  IG +L NL+
Sbjct: 24  TLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIG-QLRNLQ 82

Query: 85  TLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
            LS++ N + I P  +  L  L+ LD  +N   + P+++  L NL+ LN+ +N   L  L
Sbjct: 83  RLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN--QLTNL 140

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
              IG L +L ELD++ N+ T LP  IG L+KLQ L L  N L + P ++
Sbjct: 141 TAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 190



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 101/180 (56%), Gaps = 3/180 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +RL N+  L +  N LK +P+ IG L  L+ L++  N LE LPK I   R+L+ L+ + N
Sbjct: 30  SRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQRLSLHQN 89

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+  P  I  +L  L+ L ++ N+    P+ +  L +L+ L+ + N L +L  ++  L 
Sbjct: 90  TLKIFPAEIE-QLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQ 148

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L+++ N      LP  IG L  L  LD+  N++TTLP  IG L+ LQ L L+ N L
Sbjct: 149 NLQELDLNDN--QFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQL 206



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 2/113 (1%)

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L +       LP+ ++ L +L+ L   LN LK++P ++  L NLE LN+  N   L
Sbjct: 11  NLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEAN--EL 68

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           E LP  IG L +L  L +  N +   P  I  L+KLQKL L  N   + P ++
Sbjct: 69  ERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEI 121


>gi|392338593|ref|XP_003753576.1| PREDICTED: protein LAP2-like [Rattus norvegicus]
 gi|392345308|ref|XP_003749226.1| PREDICTED: protein LAP2-like [Rattus norvegicus]
          Length = 1430

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 105/183 (57%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LDVS N +E + + I  C +L++   + N L+QLP+TIG  L
Sbjct: 196 NRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIG-SL 254

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  Y
Sbjct: 255 KNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNIRTFAADHN--Y 312

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q L
Sbjct: 313 LQQLPPEIGNWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQL 372

Query: 200 SAV 202
           +A+
Sbjct: 373 TAM 375



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 95/190 (50%), Gaps = 10/190 (5%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 VVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 --PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
             PE LE L  L    +  N   L  +P  IG L  L  LDVS N I  + + I     L
Sbjct: 177 PKPEVLEQLSGLREFWMDGN--RLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENL 234

Query: 178 QKLSLEGNPL 187
           Q   L  N L
Sbjct: 235 QDFLLSSNSL 244



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 86/144 (59%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I   RS+EEL+ +FN++  LP +IG +
Sbjct: 241 SNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIG-Q 299

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N++T + + N +  LP  + +  ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 300 LTNIRTFAADHNYLQQLPPEIGNWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 357

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 358 RLKNLPFSFTKLQQLTAMWLSDNQ 381



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/189 (33%), Positives = 104/189 (55%), Gaps = 5/189 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPK--TIENCRSLEELNAN 65
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPK   +E    L E   +
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKPEVLEQLSGLREFWMD 194

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
            N+L  +P  IG  L  L  L ++ N I ++ + ++   +L+      N L+ LPE + +
Sbjct: 195 GNRLTFIPGFIG-SLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGS 253

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L N+  L I +N   L  LP SIG L S+ ELD S+N+I  LP SIG L  ++  + + N
Sbjct: 254 LKNVTTLKIDEN--QLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNIRTFAADHN 311

Query: 186 PLVSPPMDV 194
            L   P ++
Sbjct: 312 YLQQLPPEI 320



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 96/176 (54%), Gaps = 3/176 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L  +  LDV  N ++ +   I     L+   +S N L+ LP+TI + +++  L  + N+L
Sbjct: 208 LRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQL 267

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LPD+IG  L +++ L  + N+I  LP S+  LT++R   A  N L+ LP ++ N  N+
Sbjct: 268 MYLPDSIGG-LRSIEELDCSFNEIEALPSSIGQLTNIRTFAADHNYLQQLPPEIGNWKNV 326

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            VL +  N   LETLP  +G +  L  +++S N++  LP S   L++L  + L  N
Sbjct: 327 TVLFLHSN--KLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 380



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 95/179 (53%), Gaps = 6/179 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL--PDSIGCLRKLQKLSLEGNPLV 188
           L +  N  +LE LP + G L  L  L++  N++  L  P+ +  L  L++  ++GN L 
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKPEVLEQLSGLREFWMDGNRLT 199



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++ + L NV  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    ++ 
Sbjct: 246 QLPETIGS-LKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNIR 304

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 305 TFAADHNYLQQLPPEIG-NWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 363

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 364 FSFTKLQQLTAMWLSDN 380


>gi|417760264|ref|ZP_12408290.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417774468|ref|ZP_12422333.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418675383|ref|ZP_13236674.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409943831|gb|EKN89422.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410575801|gb|EKQ38818.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410577545|gb|EKQ45415.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 384

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/211 (36%), Positives = 111/211 (52%), Gaps = 24/211 (11%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGN--LLESLPKTIENCRSLEELNAN 65
            RL N+  L +  N+L  LP  IG L  L+ L + G       LPK I   ++L+EL+  
Sbjct: 163 GRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLK 222

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
           FN+L  LP  IG +L NL+ L +  N++ ILP+ +  L +L VLD   N L  LP+++  
Sbjct: 223 FNRLTVLPKEIG-QLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 281

Query: 126 LINLEVLNISQN-----------FQYLE----------TLPYSIGLLMSLVELDVSYNKI 164
           L NL+ LN+  N           FQ L+          TLP  IG L  L  L + +N++
Sbjct: 282 LQNLQELNLEYNRFEAFPKEITQFQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQL 341

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            TLP+ I  L+ L+KL L  NPL+S  ++ +
Sbjct: 342 ATLPEEIKQLKNLKKLYLHNNPLLSEKIERI 372



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 108/184 (58%), Gaps = 5/184 (2%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           V +LD+  ++LK LP  IG L  L++L+   N L +LPK I   ++L+EL+   N+L  L
Sbjct: 53  VRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTL 112

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P+ IG +L NLK L +N N++  LP+ +  L +L+ L+  +N L  LP+++  L NL+ L
Sbjct: 113 PEEIG-QLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQEL 171

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDV-SYNK-ITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            +S N   L  LP  IG L SL +L +   NK  T LP  I  L+ LQ+L L+ N L   
Sbjct: 172 YLSLN--RLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVL 229

Query: 191 PMDV 194
           P ++
Sbjct: 230 PKEI 233



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 107/187 (57%), Gaps = 1/187 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ +L+  +NQL  LP  IG L  L+ L +  N L +LP+ I   ++L+ L+ N N
Sbjct: 71  GQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNN 130

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ IG +L NL+ L++  N++ ILP+ +  L +L+ L   LN L  LPE++  L 
Sbjct: 131 QLTTLPEEIG-KLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLE 189

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  L++    +    LP  I  L +L EL + +N++T LP  IG L+ L+ L L  N L
Sbjct: 190 SLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRL 249

Query: 188 VSPPMDV 194
              P ++
Sbjct: 250 TILPKEI 256


>gi|440802335|gb|ELR23264.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 845

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 97/179 (54%), Gaps = 2/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+ +N+LK LP   G L  L  L  + NL    P++I     L+ LN + N++ QLPD 
Sbjct: 154 LDIDNNRLKTLPPEFGDLGSLTQLTCANNLFSHFPESICRLGFLKTLNISCNRITQLPDA 213

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           I     ++  L ++ N+ V  P+SL    SL  LD R N L  L +++  L  L  LN+S
Sbjct: 214 IAQLGDSITELDLSGNRFVTFPESLAGCRSLITLDFRDNNLCDLADNISQLCELATLNLS 273

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L TLP  IG +  L+EL++S NKI  LP  +G L  L KL L  N L + P+++
Sbjct: 274 HN--KLTTLPRQIGEMTVLMELNLSKNKIAHLPPELGHLSFLGKLYLSRNALATLPIEL 330



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 96/187 (51%), Gaps = 4/187 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P   +  L  + VLDV  N+L+ LP S+G LS L  L    NLLE LP  +    +L  
Sbjct: 71  LPSLGSGALKELEVLDVGKNRLRSLPGSVGDLSALVRLIAHCNLLEDLPPGVGELANLTV 130

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N L+QLP  +G +L  LK+L I+ N++  LP     L SL  L    N     PE
Sbjct: 131 LDLSTNNLKQLPPEVG-KLHALKSLDIDNNRLKTLPPEFGDLGSLTQLTCANNLFSHFPE 189

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLM-SLVELDVSYNKITTLPDSIGCLRKLQKL 180
            +  L  L+ LNIS N   +  LP +I  L  S+ ELD+S N+  T P+S+   R L  L
Sbjct: 190 SICRLGFLKTLNISCN--RITQLPDAIAQLGDSITELDLSGNRFVTFPESLAGCRSLITL 247

Query: 181 SLEGNPL 187
               N L
Sbjct: 248 DFRDNNL 254



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 108/219 (49%), Gaps = 28/219 (12%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLS-KLKVLDVSGNLLESLPKTIENCRSL- 59
            PES+  RL  +  L++  N++  LP++I  L   +  LD+SGN   + P+++  CRSL 
Sbjct: 187 FPESI-CRLGFLKTLNISCNRITQLPDAIAQLGDSITELDLSGNRFVTFPESLAGCRSLI 245

Query: 60  ----------------------EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILP 97
                                   LN + NKL  LP  IG E+  L  L+++ NKI  LP
Sbjct: 246 TLDFRDNNLCDLADNISQLCELATLNLSHNKLTTLPRQIG-EMTVLMELNLSKNKIAHLP 304

Query: 98  QSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVEL 157
             L HL+ L  L    N L +LP +L N+  ++ L++S N   L+ LP  I  L  L  L
Sbjct: 305 PELGHLSFLGKLYLSRNALATLPIELSNIAFIQELDLSNN--GLDDLPIEIFKLDKLQTL 362

Query: 158 DVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
            +  N +T LP  +G L +LQ L +  N L + P ++ +
Sbjct: 363 KLDCNNLTHLPPELGHLFRLQHLYVSNNQLTTLPAEISQ 401



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 104/202 (51%), Gaps = 9/202 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
            PESL A   +++ LD   N L  L ++I  L +L  L++S N L +LP+ I     L E
Sbjct: 234 FPESL-AGCRSLITLDFRDNNLCDLADNISQLCELATLNLSHNKLTTLPRQIGEMTVLME 292

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + NK+  LP  +G  L  L  L ++ N +  LP  L+++  ++ LD   N L  LP 
Sbjct: 293 LNLSKNKIAHLPPELG-HLSFLGKLYLSRNALATLPIELSNIAFIQELDLSNNGLDDLPI 351

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L  L+ L +  N   L  LP  +G L  L  L VS N++TTLP  I  L +LQ LS
Sbjct: 352 EIFKLDKLQTLKLDCN--NLTHLPPELGHLFRLQHLYVSNNQLTTLPAEISQLSRLQVLS 409

Query: 182 LEGNPLVSPPMDVVEQGLSAVK 203
           +  N +   P      G+ A+K
Sbjct: 410 IYQNAIKQLP-----DGMGALK 426



 Score = 77.8 bits (190), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 95/194 (48%), Gaps = 5/194 (2%)

Query: 7   TARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLP-KTIENCRSLEELNAN 65
           TAR      LD+   +L+ LP  +  L +L  L+VS N L +L  + +    +L  L  N
Sbjct: 7   TAR--QTFALDLQGFKLRALPKGLFDLKELSALNVSSNDLTALEDEVVRLLPALTSLRIN 64

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
            NKL  LP      L  L+ L +  N++  LP S+  L++L  L A  N L+ LP  +  
Sbjct: 65  GNKLTGLPSLGSGALKELEVLDVGKNRLRSLPGSVGDLSALVRLIAHCNLLEDLPPGVGE 124

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L NL VL++S N   L+ LP  +G L +L  LD+  N++ TLP   G L  L +L+   N
Sbjct: 125 LANLTVLDLSTN--NLKQLPPEVGKLHALKSLDIDNNRLKTLPPEFGDLGSLTQLTCANN 182

Query: 186 PLVSPPMDVVEQGL 199
                P  +   G 
Sbjct: 183 LFSHFPESICRLGF 196



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/195 (34%), Positives = 98/195 (50%), Gaps = 5/195 (2%)

Query: 15  VLDVHSNQLKCLPNSI-GCLSKLKVLDVSGNLLESLPKTIENC-RSLEELNANFNKLRQL 72
            L+V SN L  L + +   L  L  L ++GN L  LP       + LE L+   N+LR L
Sbjct: 36  ALNVSSNDLTALEDEVVRLLPALTSLRINGNKLTGLPSLGSGALKELEVLDVGKNRLRSL 95

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P ++G +L  L  L  +CN +  LP  +  L +L VLD   N LK LP ++  L  L+ L
Sbjct: 96  PGSVG-DLSALVRLIAHCNLLEDLPPGVGELANLTVLDLSTNNLKQLPPEVGKLHALKSL 154

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
           +I  N   L+TLP   G L SL +L  + N  +  P+SI  L  L+ L++  N +   P 
Sbjct: 155 DIDNN--RLKTLPPEFGDLGSLTQLTCANNLFSHFPESICRLGFLKTLNISCNRITQLPD 212

Query: 193 DVVEQGLSAVKGYLS 207
            + + G S  +  LS
Sbjct: 213 AIAQLGDSITELDLS 227



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 111/229 (48%), Gaps = 40/229 (17%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L++  N++  LP  +G LS L  L +S N L +LP  + N   ++EL+ + N L  LP  
Sbjct: 293 LNLSKNKIAHLPPELGHLSFLGKLYLSRNALATLPIELSNIAFIQELDLSNNGLDDLPIE 352

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           I F+L  L+TL ++CN +  LP  L HL  L+ L    N L +LP ++  L  L+VL+I 
Sbjct: 353 I-FKLDKLQTLKLDCNNLTHLPPELGHLFRLQHLYVSNNQLTTLPAEISQLSRLQVLSIY 411

Query: 136 QNFQYLETLPYSIGLLM--------------------------SLVELDVSYNKITTLPD 169
           QN   ++ LP  +G L                           +L +L +S N++T++P+
Sbjct: 412 QN--AIKQLPDGMGALKHIESICLGDNLLDESGLAALEKATMPALEQLVLSGNRLTSIPE 469

Query: 170 SIGCLRKLQKLSLEGNPLVSPP-----------MDVVEQGLSAVKGYLS 207
            +  L  L++L L  N +   P            D+ +  ++A+  ++S
Sbjct: 470 GLCNLASLKELYLSRNEIAELPEAITRLNKIRIFDLSDNAIAALPSFIS 518



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 96/171 (56%), Gaps = 6/171 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLL-ESLPKTIENCR--SLEELNA 64
           ++L  + VL ++ N +K LP+ +G L  ++ + +  NLL ES    +E     +LE+L  
Sbjct: 400 SQLSRLQVLSIYQNAIKQLPDGMGALKHIESICLGDNLLDESGLAALEKATMPALEQLVL 459

Query: 65  NFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLE 124
           + N+L  +P+ +   L +LK L ++ N+I  LP+++T L  +R+ D   N + +LP  + 
Sbjct: 460 SGNRLTSIPEGL-CNLASLKELYLSRNEIAELPEAITRLNKIRIFDLSDNAIAALPSFIS 518

Query: 125 NLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLR 175
           +L +L  +N+S N   L +LP     L +L  L + +N +T LP+ +  +R
Sbjct: 519 SLHSLREINLSYN--RLSSLPPEFVKLTNLCVLYLMHNNLTDLPEDLQAMR 567



 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 27/211 (12%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L  +  L +  N L  LP  +G L +L+ L VS N L +LP  I     L+ L+   N 
Sbjct: 355 KLDKLQTLKLDCNNLTHLPPELGHLFRLQHLYVSNNQLTTLPAEISQLSRLQVLSIYQNA 414

Query: 69  LRQLPDTIGF-------------------------ELINLKTLSINCNKIVILPQSLTHL 103
           ++QLPD +G                           +  L+ L ++ N++  +P+ L +L
Sbjct: 415 IKQLPDGMGALKHIESICLGDNLLDESGLAALEKATMPALEQLVLSGNRLTSIPEGLCNL 474

Query: 104 TSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
            SL+ L    N +  LPE +  L  + + ++S N   +  LP  I  L SL E+++SYN+
Sbjct: 475 ASLKELYLSRNEIAELPEAITRLNKIRIFDLSDN--AIAALPSFISSLHSLREINLSYNR 532

Query: 164 ITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +++LP     L  L  L L  N L   P D+
Sbjct: 533 LSSLPPEFVKLTNLCVLYLMHNNLTDLPEDL 563



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 2/102 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE L   L ++  L +  N++  LP +I  L+K+++ D+S N + +LP  I +  SL E
Sbjct: 467 IPEGL-CNLASLKELYLSRNEIAELPEAITRLNKIRIFDLSDNAIAALPSFISSLHSLRE 525

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHL 103
           +N ++N+L  LP     +L NL  L +  N +  LP+ L  +
Sbjct: 526 INLSYNRLSSLPPEF-VKLTNLCVLYLMHNNLTDLPEDLQAM 566


>gi|54607114|ref|NP_001005868.1| protein LAP2 isoform 1 [Mus musculus]
 gi|187954753|gb|AAI41189.1| Erbb2 interacting protein [Mus musculus]
          Length = 1450

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 105/183 (57%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LDVS N +E + + I  C +L++   + N L+QLP+TIG  L
Sbjct: 217 NRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIG-SL 275

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  Y
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHN--Y 333

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q L
Sbjct: 334 LQQLPPEIGNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQL 393

Query: 200 SAV 202
           +A+
Sbjct: 394 TAM 396



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 111/204 (54%), Gaps = 13/204 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG LR+L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSAVK 203
           L +  N +     ++VE+G+S  +
Sbjct: 235 LDVSKNNI-----EMVEEGISTCE 253



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 86/144 (59%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I   RS+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N++T + + N +  LP  + +  ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNMRTFAADHNYLQQLPPEIGNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS ++ +
Sbjct: 201 -EVLEQ-LSGLREF 212



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  L+   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L S+ ELD S+N+I
Sbjct: 254 NLQDFLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLRSIEELDCSFNEI 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  ++  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNMRTFAADHNYLQQLPPEI 341



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 77/137 (56%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++ + L NV  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    ++ 
Sbjct: 267 QLPETIGS-LKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++CNK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-NWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|417406440|gb|JAA49878.1| Putative cytoskeletal regulator flightless-i [Desmodus rotundus]
          Length = 1417

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 105/183 (57%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LD S N +E + + I  C +L++L  + N L+QLP+TIG  L
Sbjct: 217 NRLTFIPGFIGSLKQLTYLDFSKNNIEMVEEGISACENLQDLILSSNSLQQLPETIG-SL 275

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  Y
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNIRTFAADHN--Y 333

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q L
Sbjct: 334 LQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQL 393

Query: 200 SAV 202
           +A+
Sbjct: 394 TAM 396



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 111/204 (54%), Gaps = 13/204 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLNGLKEFWMDGNRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSAVK 203
           L    N +     ++VE+G+SA +
Sbjct: 235 LDFSKNNI-----EMVEEGISACE 253



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLNGLKEFWMDGNRLTFIPGFIGSLKQLTYLDFSKNNIEMVEEGISACE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLILSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLVSIEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  ++  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNIRTFAADHNYLQQLPPEI 341



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 100/186 (53%), Gaps = 5/186 (2%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQ 197
            +V+EQ
Sbjct: 201 -EVLEQ 205



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 94/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+ E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 244 MVEEGISA-CENLQDLILSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP +IG +L N++T + + N +  LP  +    ++ VL    N L++LP
Sbjct: 303 ELDCSFNEVEALPSSIG-QLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402


>gi|291240668|ref|XP_002740240.1| PREDICTED: ERBB2 interacting protein-like [Saccoglossus
           kowalevskii]
          Length = 1112

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 103/200 (51%), Gaps = 22/200 (11%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +H N L  LP  IG L  LK L VSGNL +SLP +I +   L  L A+ N++  LP++
Sbjct: 387 LQLHKNSLSYLPEDIGSLHGLKKLSVSGNLFKSLPSSIGHLTWLTRLYAHDNQITLLPES 446

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L +LKT+ +  N +V +P ++ HL  L  L    N L SLP+ + +L NL  L  S
Sbjct: 447 IG-GLQDLKTMWVQENSLVSIPHNIGHLHQLEDLRIHKNNLSSLPDSVGDLTNLTTLWAS 505

Query: 136 QN--------------FQYLET-------LPYSIGLLMSLVELDVSYNKITTLPDSIGCL 174
            N               Q+L+        LP +IG +  L  L V+ N +TTLPD IG L
Sbjct: 506 NNKLTSIPDSVCELHELQHLQLDTNSLTFLPTNIGKISWLKTLCVNNNSLTTLPDRIGNL 565

Query: 175 RKLQKLSLEGNPLVSPPMDV 194
             L+KL +  N L   P  +
Sbjct: 566 HTLEKLHVANNQLSQLPESI 585



 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/182 (36%), Positives = 109/182 (59%), Gaps = 6/182 (3%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +H N+L  LP+ IG L  +K L +SGN ++ LP +I + + L  L A+ N++  LP++
Sbjct: 292 LQLHMNKLSSLPSQIGKLKHVKNLSISGNSIKILPDSIGDLQQLTRLYAHGNQISHLPES 351

Query: 76  IGFELINLKTLSINCNKIVILP---QSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           I +EL NL T+ I+ N +V +     ++ + + ++ L    N L  LPED+ +L  L+ L
Sbjct: 352 I-WELRNLTTMWISRNSLVTVSINNGTIRNCSQIQDLQLHKNSLSYLPEDIGSLHGLKKL 410

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
           ++S N    ++LP SIG L  L  L    N+IT LP+SIG L+ L+ + ++ N LVS P 
Sbjct: 411 SVSGNL--FKSLPSSIGHLTWLTRLYAHDNQITLLPESIGGLQDLKTMWVQENSLVSIPH 468

Query: 193 DV 194
           ++
Sbjct: 469 NI 470



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/190 (37%), Positives = 104/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P S+   L  +  L  H NQ+  LP SIG L  LK + V  N L S+P  I +   LE+
Sbjct: 420 LPSSI-GHLTWLTRLYAHDNQITLLPESIGGLQDLKTMWVQENSLVSIPHNIGHLHQLED 478

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L  LPD++G +L NL TL  + NK+  +P S+  L  L+ L    N L  LP 
Sbjct: 479 LRIHKNNLSSLPDSVG-DLTNLTTLWASNNKLTSIPDSVCELHELQHLQLDTNSLTFLPT 537

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  +  L+ L ++ N   L TLP  IG L +L +L V+ N+++ LP+SI  L+ L  L 
Sbjct: 538 NIGKISWLKTLCVNNN--SLTTLPDRIGNLHTLEKLHVANNQLSQLPESIRKLKNLTTLV 595

Query: 182 LEGNPLVSPP 191
           +  N LVS P
Sbjct: 596 VSKNALVSMP 605



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 106/199 (53%), Gaps = 7/199 (3%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLP---KTIENCR 57
           ++P+S+   L  +  L  H NQ+  LP SI  L  L  + +S N L ++     TI NC 
Sbjct: 324 ILPDSI-GDLQQLTRLYAHGNQISHLPESIWELRNLTTMWISRNSLVTVSINNGTIRNCS 382

Query: 58  SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK 117
            +++L  + N L  LP+ IG  L  LK LS++ N    LP S+ HLT L  L A  N + 
Sbjct: 383 QIQDLQLHKNSLSYLPEDIG-SLHGLKKLSVSGNLFKSLPSSIGHLTWLTRLYAHDNQIT 441

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
            LPE +  L +L+ + + +N   L ++P++IG L  L +L +  N +++LPDS+G L  L
Sbjct: 442 LLPESIGGLQDLKTMWVQEN--SLVSIPHNIGHLHQLEDLRIHKNNLSSLPDSVGDLTNL 499

Query: 178 QKLSLEGNPLVSPPMDVVE 196
             L    N L S P  V E
Sbjct: 500 TTLWASNNKLTSIPDSVCE 518



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/197 (37%), Positives = 108/197 (54%), Gaps = 7/197 (3%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++PES+   L  +  L +H N ++ LP  IG L  L+ L +S N L  LP +I +   LE
Sbjct: 232 IVPESI-CDLHKLHDLQLHGNNIQFLPKRIGQLKWLRKLRMSSNSLTRLPHSICDLNKLE 290

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + NKL  LP  IG +L ++K LSI+ N I ILP S+  L  L  L A  N +  LP
Sbjct: 291 DLQLHMNKLSSLPSQIG-KLKHVKNLSISGNSIKILPDSIGDLQQLTRLYAHGNQISHLP 349

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMS---LVELDVSYNKITTLPDSIGCLRKL 177
           E +  L NL  + IS+N   L T+  + G + +   + +L +  N ++ LP+ IG L  L
Sbjct: 350 ESIWELRNLTTMWISRN--SLVTVSINNGTIRNCSQIQDLQLHKNSLSYLPEDIGSLHGL 407

Query: 178 QKLSLEGNPLVSPPMDV 194
           +KLS+ GN   S P  +
Sbjct: 408 KKLSVSGNLFKSLPSSI 424



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 99/199 (49%), Gaps = 7/199 (3%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+S+   L  +     H N+L  LP SIG L  L  L VS N L S+P +I +   L++
Sbjct: 159 IPDSI-GDLNKLQDFQAHRNKLSSLPESIGKLQNLTKLWVSRNSLTSIPDSICDLNKLQD 217

Query: 62  LNANFNKLRQLPDTIGFELI----NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK 117
           L  + N L  LPD I  E I     L  L ++ N I  LP+ +  L  LR L    N L 
Sbjct: 218 LRLHTNNLSYLPDRIVPESICDLHKLHDLQLHGNNIQFLPKRIGQLKWLRKLRMSSNSLT 277

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
            LP  + +L  LE L +  N   L +LP  IG L  +  L +S N I  LPDSIG L++L
Sbjct: 278 RLPHSICDLNKLEDLQLHMN--KLSSLPSQIGKLKHVKNLSISGNSIKILPDSIGDLQQL 335

Query: 178 QKLSLEGNPLVSPPMDVVE 196
            +L   GN +   P  + E
Sbjct: 336 TRLYAHGNQISHLPESIWE 354



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 105/189 (55%), Gaps = 9/189 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P S++  L  + +L ++SN+L  LP SI  L  L  L +  N L++LP +I N + LE 
Sbjct: 67  LPPSIST-LKQLRMLHMNSNRLTSLPGSICKLRNLSTLCLERNSLKTLPNSICNLQQLER 125

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  N N++  LP+ IG +L NL+T  I+ N +V +P S+  L  L+   A  N L SLPE
Sbjct: 126 LYLNNNQISHLPECIG-KLRNLETFLISKNSLVSIPDSIGDLNKLQDFQAHRNKLSSLPE 184

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPD-----SIGCLRK 176
            +  L NL  L +S+N   L ++P SI  L  L +L +  N ++ LPD     SI  L K
Sbjct: 185 SIGKLQNLTKLWVSRN--SLTSIPDSICDLNKLQDLRLHTNNLSYLPDRIVPESICDLHK 242

Query: 177 LQKLSLEGN 185
           L  L L GN
Sbjct: 243 LHDLQLHGN 251



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 102/184 (55%), Gaps = 3/184 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           +D+  N++  LP SI  L +L++L ++ N L SLP +I   R+L  L    N L+ LP++
Sbjct: 57  VDLKKNRIAKLPPSISTLKQLRMLHMNSNRLTSLPGSICKLRNLSTLCLERNSLKTLPNS 116

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           I   L  L+ L +N N+I  LP+ +  L +L       N L S+P+ + +L  L+     
Sbjct: 117 I-CNLQQLERLYLNNNQISHLPECIGKLRNLETFLISKNSLVSIPDSIGDLNKLQDFQAH 175

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
           +N   L +LP SIG L +L +L VS N +T++PDSI  L KLQ L L  N L   P  +V
Sbjct: 176 RN--KLSSLPESIGKLQNLTKLWVSRNSLTSIPDSICDLNKLQDLRLHTNNLSYLPDRIV 233

Query: 196 EQGL 199
            + +
Sbjct: 234 PESI 237



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/215 (37%), Positives = 118/215 (54%), Gaps = 14/215 (6%)

Query: 2    IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
            +PESL   L N+  L   +N+L  LP++ G LSKL+ L++S N ++SLP++I    +L +
Sbjct: 884  LPESL-CELTNLKQLLAKNNELDTLPDNFGELSKLEYLNISNNKVKSLPESIGKLENLTQ 942

Query: 62   LNANFNKLRQLPDTIGFELINLKTLSINCNKI---VILPQSLTHL-TSLRVLDARLNCLK 117
            L AN N + +LPD    + +    L  N NK        + +++L  +L+ L    N L 
Sbjct: 943  LCANNNSISELPDIRKLKKLTALYLG-NNNKTRPNSKFSECISNLPITLKTLWMFGNSLT 1001

Query: 118  SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
            SLPE +  L NLE L I +N   LE+LP  IG L SL +L V  N + +LPD I  L++L
Sbjct: 1002 SLPESISTLRNLEELMIQEN--KLESLPDEIGKLGSLTKLWVHNNLLKSLPD-ISSLKQL 1058

Query: 178  QKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNN 212
            Q LSL  N L   P     +G+  +K   S + N+
Sbjct: 1059 QDLSLTDNKLEKLP-----EGIGNLKSLRSIRFND 1088



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 103/216 (47%), Gaps = 28/216 (12%)

Query: 2    IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
             PE L      V  +D+ SN L  LP  I    KL  L+++ N L+ LP+++    +L++
Sbjct: 837  FPEKLLENFQRVRKVDLQSNYLTTLPEDINYSQKLYYLNINNNKLKCLPESLCELTNLKQ 896

Query: 62   LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
            L A  N+L  LPD  G EL  L+ L+I+ NK+  LP+S+  L +L  L A  N +  LP 
Sbjct: 897  LLAKNNELDTLPDNFG-ELSKLEYLNISNNKVKSLPESIGKLENLTQLCANNNSISELP- 954

Query: 122  DLENLINLEVLNISQNFQY--------------------------LETLPYSIGLLMSLV 155
            D+  L  L  L +  N +                           L +LP SI  L +L 
Sbjct: 955  DIRKLKKLTALYLGNNNKTRPNSKFSECISNLPITLKTLWMFGNSLTSLPESISTLRNLE 1014

Query: 156  ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            EL +  NK+ +LPD IG L  L KL +  N L S P
Sbjct: 1015 ELMIQENKLESLPDEIGKLGSLTKLWVHNNLLKSLP 1050



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 105/198 (53%), Gaps = 5/198 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P S+  +L N+  L +  N LK LPNSI  L +L+ L ++ N +  LP+ I   R+LE 
Sbjct: 90  LPGSI-CKLRNLSTLCLERNSLKTLPNSICNLQQLERLYLNNNQISHLPECIGKLRNLET 148

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
              + N L  +PD+IG +L  L+    + NK+  LP+S+  L +L  L    N L S+P+
Sbjct: 149 FLISKNSLVSIPDSIG-DLNKLQDFQAHRNKLSSLPESIGKLQNLTKLWVSRNSLTSIPD 207

Query: 122 DLENLINLEVLNI-SQNFQYL--ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQ 178
            + +L  L+ L + + N  YL    +P SI  L  L +L +  N I  LP  IG L+ L+
Sbjct: 208 SICDLNKLQDLRLHTNNLSYLPDRIVPESICDLHKLHDLQLHGNNIQFLPKRIGQLKWLR 267

Query: 179 KLSLEGNPLVSPPMDVVE 196
           KL +  N L   P  + +
Sbjct: 268 KLRMSSNSLTRLPHSICD 285



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 86/168 (51%), Gaps = 4/168 (2%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +H N L  LP+S+G L+ L  L  S N L S+P ++     L+ L  + N L  LP  
Sbjct: 479 LRIHKNNLSSLPDSVGDLTNLTTLWASNNKLTSIPDSVCELHELQHLQLDTNSLTFLPTN 538

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG ++  LKTL +N N +  LP  + +L +L  L    N L  LPE +  L NL  L +S
Sbjct: 539 IG-KISWLKTLCVNNNSLTTLPDRIGNLHTLEKLHVANNQLSQLPESIRKLKNLTTLVVS 597

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLE 183
           +N   L ++P ++  L  L +     N++ +LP  I  LR L  +  +
Sbjct: 598 KN--ALVSMP-NMSYLHKLEQFRFENNELQSLPRGIDTLRHLHTIKFD 642



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/141 (39%), Positives = 84/141 (59%), Gaps = 7/141 (4%)

Query: 41  VSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSL 100
           V  +L E   K +EN + + +++   N L  LP+ I +    L  L+IN NK+  LP+SL
Sbjct: 830 VKSDLKEFPEKLLENFQRVRKVDLQSNYLTTLPEDINYSQ-KLYYLNINNNKLKCLPESL 888

Query: 101 THLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVS 160
             LT+L+ L A+ N L +LP++   L  LE LNIS N   +++LP SIG L +L +L  +
Sbjct: 889 CELTNLKQLLAKNNELDTLPDNFGELSKLEYLNISNN--KVKSLPESIGKLENLTQLCAN 946

Query: 161 YNKITTLPDSIGCLRKLQKLS 181
            N I+ LPD    +RKL+KL+
Sbjct: 947 NNSISELPD----IRKLKKLT 963



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 67/123 (54%), Gaps = 2/123 (1%)

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L++ P+ +      ++ + +  N +  LP+ + +   L  L+   N LK LPE L  L N
Sbjct: 834 LKEFPEKLLENFQRVRKVDLQSNYLTTLPEDINYSQKLYYLNINNNKLKCLPESLCELTN 893

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +++N + L+TLP + G L  L  L++S NK+ +LP+SIG L  L +L    N + 
Sbjct: 894 LKQL-LAKNNE-LDTLPDNFGELSKLEYLNISNNKVKSLPESIGKLENLTQLCANNNSIS 951

Query: 189 SPP 191
             P
Sbjct: 952 ELP 954



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 17/170 (10%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+S+   L N+  L   +N+L  +P+S+  L +L+ L +  N L  LP  I     L+ 
Sbjct: 489 LPDSV-GDLTNLTTLWASNNKLTSIPDSVCELHELQHLQLDTNSLTFLPTNIGKISWLKT 547

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  N N L  LPD IG  L  L+ L +  N++  LP+S+  L +L  L    N L S+P 
Sbjct: 548 LCVNNNSLTTLPDRIG-NLHTLEKLHVANNQLSQLPESIRKLKNLTTLVVSKNALVSMP- 605

Query: 122 DLENLINLEVLNISQNFQY----LETLPYSIGLLMSL----VELDVSYNK 163
                 N+  L+  + F++    L++LP  I  L  L     ++D+  NK
Sbjct: 606 ------NMSYLHKLEQFRFENNELQSLPRGIDTLRHLHTIKFDVDIKDNK 649


>gi|456984207|gb|EMG20322.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Copenhageni str. LT2050]
          Length = 319

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/186 (38%), Positives = 104/186 (55%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  LD+  NQL   P  I  L KL+ LD+S N L  LP  I   ++L+EL    NK
Sbjct: 69  QLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNK 128

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L   P  IG +L NL+ L ++ N++  LP+ +  L +L+ LD + N    LP+++  L N
Sbjct: 129 LTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQN 187

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ LN+  N   L TLP  IG L +L EL +  N++T LP  IG L+ LQ L    N L 
Sbjct: 188 LQTLNLQDN--QLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLT 245

Query: 189 SPPMDV 194
           + P ++
Sbjct: 246 ALPKEM 251



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 101/179 (56%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  N+L  LPN IG L  L+ L +  N L + PK I   ++L++L  + N+L  LP  
Sbjct: 99  LDLSENRLVMLPNEIGRLQNLQELGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKE 158

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL+TL +  N+  ILP+ +  L +L+ L+ + N L +LP ++  L NL+ L + 
Sbjct: 159 IG-QLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLR 217

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L  LP  IG L +L  L    N++T LP  +G L+ LQ L+L  N L   P ++
Sbjct: 218 NN--RLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEI 274



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 105/187 (56%), Gaps = 4/187 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+P  +  RL N+  L ++ N+L   P  IG L  L+ L +S N L +LPK I   ++L+
Sbjct: 108 MLPNEI-GRLQNLQELGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQ 166

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   N+   LP  IG +L NL+TL++  N++  LP  +  L +L+ L  R N L  LP
Sbjct: 167 TLDLQNNQFTILPKEIG-QLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLP 225

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++  L NL+ L   +N   L  LP  +G L +L  L++  N++T LP  IG L+ LQ L
Sbjct: 226 KEIGQLQNLQTLCSPEN--RLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDL 283

Query: 181 SLEGNPL 187
            L  NPL
Sbjct: 284 ELLMNPL 290



 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 101/184 (54%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           LNV VLD+       LP  I  L  L+ LD+  N L + P  I   + LE L+ + N+L 
Sbjct: 48  LNVRVLDLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLV 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP+ IG  L NL+ L +  NK+   P+ +  L +L+ L    N L +LP+++  L NL+
Sbjct: 108 MLPNEIG-RLQNLQELGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQ 166

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++ QN Q+   LP  IG L +L  L++  N++ TLP  IG L+ LQ+L L  N L   
Sbjct: 167 TLDL-QNNQF-TILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVL 224

Query: 191 PMDV 194
           P ++
Sbjct: 225 PKEI 228



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 65/114 (57%), Gaps = 5/114 (4%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +  ++RVLD       +LP+++E L NL+ L++  N   L T P  I  L  L 
Sbjct: 40  LTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQELDLRDN--QLATFPAVIVELQKLE 97

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGLSAVKGYLSE 208
            LD+S N++  LP+ IG L+ LQ+L L  N L + P ++ + Q L   K +LSE
Sbjct: 98  SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLTTFPKEIGQLQNLQ--KLWLSE 149


>gi|149059246|gb|EDM10253.1| rCG44547 [Rattus norvegicus]
          Length = 1190

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/189 (35%), Positives = 109/189 (57%), Gaps = 6/189 (3%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LDVS N +E + + I  C +L++   + N L+QLP+TIG  L
Sbjct: 4   NRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIG-SL 62

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  Y
Sbjct: 63  KNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNIRTFAADHN--Y 120

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q L
Sbjct: 121 LQQLPPEIGNWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQL 180

Query: 200 SAVKGYLSE 208
           +A+  +LS+
Sbjct: 181 TAM--WLSD 187



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 86/144 (59%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I   RS+EEL+ +FN++  LP +IG +
Sbjct: 49  SNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIG-Q 107

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N++T + + N +  LP  + +  ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 108 LTNIRTFAADHNYLQQLPPEIGNWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 165

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 166 RLKNLPFSFTKLQQLTAMWLSDNQ 189



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 96/176 (54%), Gaps = 3/176 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L  +  LDV  N ++ +   I     L+   +S N L+ LP+TI + +++  L  + N+L
Sbjct: 16  LRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQL 75

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LPD+IG  L +++ L  + N+I  LP S+  LT++R   A  N L+ LP ++ N  N+
Sbjct: 76  MYLPDSIGG-LRSIEELDCSFNEIEALPSSIGQLTNIRTFAADHNYLQQLPPEIGNWKNV 134

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            VL +  N   LETLP  +G +  L  +++S N++  LP S   L++L  + L  N
Sbjct: 135 TVLFLHSN--KLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 188



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++ + L NV  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    ++ 
Sbjct: 54  QLPETIGS-LKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNIR 112

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++ NK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 113 TFAADHNYLQQLPPEIG-NWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 171

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 172 FSFTKLQQLTAMWLSDN 188


>gi|418666378|ref|ZP_13227803.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|421128065|ref|ZP_15588283.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421136636|ref|ZP_15596738.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019242|gb|EKO86065.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410434532|gb|EKP83670.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410757871|gb|EKR19476.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 288

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/181 (40%), Positives = 107/181 (59%), Gaps = 6/181 (3%)

Query: 12  NVVVLDVHSNQ---LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +V+VL+   N+   LK LP  IG L  LK L +S N + +LP  I N ++L+ L+ N N+
Sbjct: 48  DVLVLNYRDNEENPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNR 107

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  +P  IG  L NLK LSI  NK+  LP+ + +L +L+ L    N LK LP+++ NL  
Sbjct: 108 LETIPKEIG-NLKNLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRK 166

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ +++S N   L  LP  I  L SL+E+ +  N+ TTLP  IG L+ L+ L L  N L+
Sbjct: 167 LQRIHLSTN--ELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLI 224

Query: 189 S 189
           S
Sbjct: 225 S 225



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 110/188 (58%), Gaps = 3/188 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L + +N++  LP  IG L  L+VL ++GN LE++PK I N ++L+EL+  +N
Sbjct: 70  GNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWN 129

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL+ LP  IG  L NLK L ++ N++ ILPQ + +L  L+ +    N L  LP++++NL 
Sbjct: 130 KLQTLPKEIG-NLKNLKELYLSRNQLKILPQEIGNLRKLQRIHLSTNELTKLPQEIKNLE 188

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  + +  N     TLP  IG L +L  L +  N++ +L   IG L+ L++L LE N L
Sbjct: 189 SLLEIYLYDN--QFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELYLEENQL 246

Query: 188 VSPPMDVV 195
              P  + 
Sbjct: 247 TMLPKQIA 254



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 112/190 (58%), Gaps = 3/190 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+ VL ++ N+L+ +P  IG L  LK L +  N L++LPK I N ++L+EL  + N
Sbjct: 93  GNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTLPKEIGNLKNLKELYLSRN 152

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG  L  L+ + ++ N++  LPQ + +L SL  +    N   +LP+++ NL 
Sbjct: 153 QLKILPQEIG-NLRKLQRIHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLK 211

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L + +N Q +  LP  IG L +L EL +  N++T LP  I  L++L +LSL+GN  
Sbjct: 212 NLRNLVLGRN-QLISLLP-EIGNLKNLKELYLEENQLTMLPKQIAALKQLARLSLKGNQF 269

Query: 188 VSPPMDVVEQ 197
            S   + +++
Sbjct: 270 PSEEKERIQR 279



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 2/85 (2%)

Query: 110 DARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPD 169
           D   N LK+LP+++ NL NL+ L +S N   + TLP  IG L +L  L ++ N++ T+P 
Sbjct: 56  DNEENPLKTLPKEIGNLQNLKELYLSAN--EITTLPPEIGNLKNLQVLSLNGNRLETIPK 113

Query: 170 SIGCLRKLQKLSLEGNPLVSPPMDV 194
            IG L+ L++LS+E N L + P ++
Sbjct: 114 EIGNLKNLKELSIEWNKLQTLPKEI 138



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 1/78 (1%)

Query: 118 SLPEDLENLINLEVLNISQNFQY-LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
            L E  +N  ++ VLN   N +  L+TLP  IG L +L EL +S N+ITTLP  IG L+ 
Sbjct: 38  DLEEAFKNPKDVLVLNYRDNEENPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKN 97

Query: 177 LQKLSLEGNPLVSPPMDV 194
           LQ LSL GN L + P ++
Sbjct: 98  LQVLSLNGNRLETIPKEI 115


>gi|395850250|ref|XP_003797708.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           [Otolemur garnettii]
          Length = 1052

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 112/236 (47%), Gaps = 43/236 (18%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LDV  N+L  LP+S  CLS+L+ LDV  N L + P+ +    SLEEL+ + N+L+ LP+ 
Sbjct: 163 LDVSFNRLAHLPDSFSCLSRLRTLDVDHNQLTAFPRQLLQLASLEELDVSSNRLQGLPED 222

Query: 76  I---------------------GF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL 113
           I                     GF EL +L++L ++ N +  LP   + L  L++L+   
Sbjct: 223 ISALRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSS 282

Query: 114 NCLKSLPEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLM 152
           N L+  P  L  L  LE L +S+N                        +  LP SI  L 
Sbjct: 283 NLLEEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLSRLLTLWLDNNRIRYLPDSIVELT 342

Query: 153 SLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSE 208
            L EL +  N+I  LPD+ G L ++    ++ NPL+ PP +V  +G+  +  Y  E
Sbjct: 343 GLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAYQKE 398



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 92/171 (53%), Gaps = 4/171 (2%)

Query: 16  LDVHSNQLKCLPNSI-GCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           LDV  N+L  L + +   L +L+ L++S N L +LP  +     LEEL+ +FN+L  LPD
Sbjct: 116 LDVSHNRLTTLGSEVVSALRELRKLNLSHNQLPALPTQLGTLAQLEELDVSFNRLAHLPD 175

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
           +    L  L+TL ++ N++   P+ L  L SL  LD   N L+ LPED+  L  L++L +
Sbjct: 176 SFSC-LSRLRTLDVDHNQLTAFPRQLLQLASLEELDVSSNRLQGLPEDISALRALKILWL 234

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           S     L TLP     L SL  L +  N +  LP     L++L+ L+L  N
Sbjct: 235 SG--AELGTLPAGFCELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSN 283



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/146 (36%), Positives = 78/146 (53%), Gaps = 8/146 (5%)

Query: 55  NCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLT----HLTSLRVLD 110
           N   +E LN   N L ++PD +G  L +L+ L +  N+   LP ++     HLT L V  
Sbjct: 61  NIGDIEVLNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSH 120

Query: 111 ARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDS 170
            RL  L S  E +  L  L  LN+S N   L  LP  +G L  L ELDVS+N++  LPDS
Sbjct: 121 NRLTTLGS--EVVSALRELRKLNLSHN--QLPALPTQLGTLAQLEELDVSFNRLAHLPDS 176

Query: 171 IGCLRKLQKLSLEGNPLVSPPMDVVE 196
             CL +L+ L ++ N L + P  +++
Sbjct: 177 FSCLSRLRTLDVDHNQLTAFPRQLLQ 202



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 10/122 (8%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +RL  + +L++ SN L+  P ++  L+ L+ L +S N L S+P  I     L  L  + N
Sbjct: 270 SRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLSRLLTLWLDNN 329

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLN---------CLKS 118
           ++R LPD+I  EL  L+ L +  N+I +LP +   L+ + +   + N         C+K 
Sbjct: 330 RIRYLPDSI-VELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKG 388

Query: 119 LP 120
           +P
Sbjct: 389 IP 390


>gi|418703877|ref|ZP_13264760.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|418710678|ref|ZP_13271446.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|418714400|ref|ZP_13274960.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410766574|gb|EKR37258.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410768900|gb|EKR44145.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410789343|gb|EKR83045.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 288

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/181 (40%), Positives = 107/181 (59%), Gaps = 6/181 (3%)

Query: 12  NVVVLDVHSNQ---LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +V+VL+   N+   LK LP  IG L  LK L +S N + +LP  I N ++L+ L+ N N+
Sbjct: 48  DVLVLNYRDNEENPLKTLPKEIGNLQNLKKLYLSANEITTLPPEIGNLKNLQVLSLNGNR 107

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  +P  IG  L NLK LSI  NK+  LP+ + +L +L+ L    N LK LP+++ NL  
Sbjct: 108 LETIPKEIG-NLKNLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRK 166

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ +++S N   L  LP  I  L SL+E+ +  N+ TTLP  IG L+ L+ L L  N L+
Sbjct: 167 LQRMHLSTN--ELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLI 224

Query: 189 S 189
           S
Sbjct: 225 S 225



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 110/188 (58%), Gaps = 3/188 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L + +N++  LP  IG L  L+VL ++GN LE++PK I N ++L+EL+  +N
Sbjct: 70  GNLQNLKKLYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWN 129

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL+ LP  IG  L NLK L ++ N++ ILPQ + +L  L+ +    N L  LP++++NL 
Sbjct: 130 KLQTLPKEIG-NLKNLKELYLSRNQLKILPQEIGNLRKLQRMHLSTNELTKLPQEIKNLE 188

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  + +  N     TLP  IG L +L  L +  N++ +L   IG L+ L++L LE N L
Sbjct: 189 SLLEIYLYDN--QFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELYLEENQL 246

Query: 188 VSPPMDVV 195
              P  + 
Sbjct: 247 TMLPKQIA 254



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 112/190 (58%), Gaps = 3/190 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+ VL ++ N+L+ +P  IG L  LK L +  N L++LPK I N ++L+EL  + N
Sbjct: 93  GNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTLPKEIGNLKNLKELYLSRN 152

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG  L  L+ + ++ N++  LPQ + +L SL  +    N   +LP+++ NL 
Sbjct: 153 QLKILPQEIG-NLRKLQRMHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLK 211

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L + +N Q +  LP  IG L +L EL +  N++T LP  I  L++L +LSL+GN  
Sbjct: 212 NLRNLVLGRN-QLISLLP-EIGNLKNLKELYLEENQLTMLPKQIAALKQLARLSLKGNQF 269

Query: 188 VSPPMDVVEQ 197
            S   + +++
Sbjct: 270 PSEEKERIQR 279



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 2/85 (2%)

Query: 110 DARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPD 169
           D   N LK+LP+++ NL NL+ L +S N   + TLP  IG L +L  L ++ N++ T+P 
Sbjct: 56  DNEENPLKTLPKEIGNLQNLKKLYLSAN--EITTLPPEIGNLKNLQVLSLNGNRLETIPK 113

Query: 170 SIGCLRKLQKLSLEGNPLVSPPMDV 194
            IG L+ L++LS+E N L + P ++
Sbjct: 114 EIGNLKNLKELSIEWNKLQTLPKEI 138



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 1/78 (1%)

Query: 118 SLPEDLENLINLEVLNISQNFQY-LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
            L E  +N  ++ VLN   N +  L+TLP  IG L +L +L +S N+ITTLP  IG L+ 
Sbjct: 38  DLEEAFKNPKDVLVLNYRDNEENPLKTLPKEIGNLQNLKKLYLSANEITTLPPEIGNLKN 97

Query: 177 LQKLSLEGNPLVSPPMDV 194
           LQ LSL GN L + P ++
Sbjct: 98  LQVLSLNGNRLETIPKEI 115


>gi|187954433|gb|AAI41179.1| Erbb2ip protein [Mus musculus]
          Length = 1294

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/189 (35%), Positives = 109/189 (57%), Gaps = 6/189 (3%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LDVS N +E + + I  C +L++   + N L+QLP+TIG  L
Sbjct: 217 NRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIG-SL 275

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  Y
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHN--Y 333

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q L
Sbjct: 334 LQQLPPEIGNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQL 393

Query: 200 SAVKGYLSE 208
           +A+  +LS+
Sbjct: 394 TAM--WLSD 400



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 105/187 (56%), Gaps = 10/187 (5%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L  + A+ N + +LPD 
Sbjct: 74  LSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPD- 132

Query: 76  IGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            GF +L+NL  L +N   +  LP +   LT L++L+ R N LK LP+ +  L  LE L++
Sbjct: 133 -GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDL 191

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N ++ E +P  +  L  L E  +  N++T +P  IG LR+L  L +  N +     ++
Sbjct: 192 GSN-EFTE-VPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNI-----EM 244

Query: 195 VEQGLSA 201
           VE+G+S 
Sbjct: 245 VEEGIST 251



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 86/144 (59%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I   RS+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N++T + + N +  LP  + +  ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNMRTFAADHNYLQQLPPEIGNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS ++ +
Sbjct: 201 -EVLEQ-LSGLREF 212



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  L+   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L S+ ELD S+N+I
Sbjct: 254 NLQDFLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLRSIEELDCSFNEI 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  ++  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNMRTFAADHNYLQQLPPEI 341



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 77/137 (56%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++ + L NV  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    ++ 
Sbjct: 267 QLPETIGS-LKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++CNK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-NWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|149634426|ref|XP_001507343.1| PREDICTED: leucine-rich repeat-containing protein 30-like
           [Ornithorhynchus anatinus]
          Length = 301

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 113/212 (53%), Gaps = 12/212 (5%)

Query: 7   TARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANF 66
             +L  +VVL++  N+LK LP  IG L  +KVL V+ N L  +P  +  C+ LE L+ + 
Sbjct: 90  VGKLDQIVVLNLSGNRLKYLPKEIGLLKSMKVLFVNMNCLTEMPGDLSLCQKLEVLSLSH 149

Query: 67  NKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENL 126
           N + QLP +   +L  L+ L+++ N  V +P  +  L  L  L    N L+++ E +E L
Sbjct: 150 NCVSQLPASFA-DLTRLRKLNLSNNHFVHIPICVFSLKGLDFLHVGSNQLENIAESIELL 208

Query: 127 INLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLE--- 183
           +NL++     N   + +LP S+  + SL  LDV +N + TLPD +  L +L K++     
Sbjct: 209 VNLQIFIAESN--NIHSLPRSLCSVTSLELLDVDHNDLQTLPDELYLLHRLAKIAWNPMD 266

Query: 184 ------GNPLVSPPMDVVEQGLSAVKGYLSEK 209
                  NPL  P  +VVE GL  +  YL +K
Sbjct: 267 KGLHVIHNPLSKPLPEVVEGGLEMLFSYLKDK 298



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 75/142 (52%), Gaps = 3/142 (2%)

Query: 46  LESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTS 105
           +  +P  +     +++LN + N+L  LP  +G +L  +  L+++ N++  LP+ +  L S
Sbjct: 60  MSDVPDFLWGLSEVQKLNLSCNRLLILPPAVG-KLDQIVVLNLSGNRLKYLPKEIGLLKS 118

Query: 106 LRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
           ++VL   +NCL  +P DL     LEVL++S N   +  LP S   L  L +L++S N   
Sbjct: 119 MKVLFVNMNCLTEMPGDLSLCQKLEVLSLSHN--CVSQLPASFADLTRLRKLNLSNNHFV 176

Query: 166 TLPDSIGCLRKLQKLSLEGNPL 187
            +P  +  L+ L  L +  N L
Sbjct: 177 HIPICVFSLKGLDFLHVGSNQL 198


>gi|418738175|ref|ZP_13294571.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
 gi|410746349|gb|EKQ99256.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
          Length = 218

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/157 (42%), Positives = 96/157 (61%), Gaps = 3/157 (1%)

Query: 38  VLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILP 97
            L ++GN L++LPK I   ++LE LN   NKLR LP  IG  L NLK L    N++  LP
Sbjct: 55  ALYLNGNELKTLPKEIGELQNLEHLNLWKNKLRTLPKEIG-NLQNLKVLDSGLNELTTLP 113

Query: 98  QSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVEL 157
           + +  L +LR LD   N L +LP+++ NL NL+ L ++ N   L TLP  IG L +L EL
Sbjct: 114 KEIGELQNLRYLDLSGNQLMTLPKEIWNLQNLQELYLNGN--QLMTLPKEIGELQNLQEL 171

Query: 158 DVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            +S N++ TLP  I  L+ L++L L GN L++ P ++
Sbjct: 172 HLSGNQLMTLPKEIWNLQNLRELHLSGNQLMTLPKEI 208



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/170 (38%), Positives = 105/170 (61%), Gaps = 3/170 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           ++V  L ++ N+LK LP  IG L  L+ L++  N L +LPK I N ++L+ L++  N+L 
Sbjct: 51  MDVGALYLNGNELKTLPKEIGELQNLEHLNLWKNKLRTLPKEIGNLQNLKVLDSGLNELT 110

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  IG EL NL+ L ++ N+++ LP+ + +L +L+ L    N L +LP+++  L NL+
Sbjct: 111 TLPKEIG-ELQNLRYLDLSGNQLMTLPKEIWNLQNLQELYLNGNQLMTLPKEIGELQNLQ 169

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            L++S N   L TLP  I  L +L EL +S N++ TLP  I   +KL+ L
Sbjct: 170 ELHLSGN--QLMTLPKEIWNLQNLRELHLSGNQLMTLPKEIWNSKKLRVL 217



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/125 (43%), Positives = 77/125 (61%), Gaps = 1/125 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+ VLD   N+L  LP  IG L  L+ LD+SGN L +LPK I N ++L+EL  N N
Sbjct: 94  GNLQNLKVLDSGLNELTTLPKEIGELQNLRYLDLSGNQLMTLPKEIWNLQNLQELYLNGN 153

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG EL NL+ L ++ N+++ LP+ + +L +LR L    N L +LP+++ N  
Sbjct: 154 QLMTLPKEIG-ELQNLQELHLSGNQLMTLPKEIWNLQNLRELHLSGNQLMTLPKEIWNSK 212

Query: 128 NLEVL 132
            L VL
Sbjct: 213 KLRVL 217



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/141 (39%), Positives = 82/141 (58%), Gaps = 3/141 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L++  N+L+ LP  IG L  LKVLD   N L +LPK I   ++L  L+ + N
Sbjct: 71  GELQNLEHLNLWKNKLRTLPKEIGNLQNLKVLDSGLNELTTLPKEIGELQNLRYLDLSGN 130

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I + L NL+ L +N N+++ LP+ +  L +L+ L    N L +LP+++ NL 
Sbjct: 131 QLMTLPKEI-WNLQNLQELYLNGNQLMTLPKEIGELQNLQELHLSGNQLMTLPKEIWNLQ 189

Query: 128 NLEVLNISQNFQYLETLPYSI 148
           NL  L++S N   L TLP  I
Sbjct: 190 NLRELHLSGN--QLMTLPKEI 208



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/116 (38%), Positives = 72/116 (62%), Gaps = 2/116 (1%)

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
           +++  L +N N++  LP+ +  L +L  L+   N L++LP+++ NL NL+VL+   N   
Sbjct: 51  MDVGALYLNGNELKTLPKEIGELQNLEHLNLWKNKLRTLPKEIGNLQNLKVLDSGLN--E 108

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           L TLP  IG L +L  LD+S N++ TLP  I  L+ LQ+L L GN L++ P ++ E
Sbjct: 109 LTTLPKEIGELQNLRYLDLSGNQLMTLPKEIWNLQNLQELYLNGNQLMTLPKEIGE 164


>gi|421088662|ref|ZP_15549483.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410002643|gb|EKO53159.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 219

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/158 (43%), Positives = 96/158 (60%), Gaps = 3/158 (1%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           +++++LD+S   L +LPK I    +LE LN   NKL  LP+ IG EL NLK L I  NKI
Sbjct: 46  NEVRILDLSRKQLTTLPKEIGQLVNLERLNLRDNKLTNLPEEIG-ELENLKILDITRNKI 104

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
              P+    L +L VL    N L +LPE++  L  L +L ++ N   L TLP  IG L +
Sbjct: 105 STFPKEFWKLKNLEVLLLNGNSLSNLPEEIGELEKLGILYLNNN--QLTTLPKEIGRLEN 162

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LV L +S NK+T++PD +G L+KL+ L+L  NP ++ P
Sbjct: 163 LVSLSLSSNKLTSIPDELGQLKKLRILNLWDNPTLTTP 200



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 73/130 (56%), Gaps = 1/130 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L+N+  L++  N+L  LP  IG L  LK+LD++ N + + PK     ++LE L  N N
Sbjct: 66  GQLVNLERLNLRDNKLTNLPEEIGELENLKILDITRNKISTFPKEFWKLKNLEVLLLNGN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP+ IG EL  L  L +N N++  LP+ +  L +L  L    N L S+P++L  L 
Sbjct: 126 SLSNLPEEIG-ELEKLGILYLNNNQLTTLPKEIGRLENLVSLSLSSNKLTSIPDELGQLK 184

Query: 128 NLEVLNISQN 137
            L +LN+  N
Sbjct: 185 KLRILNLWDN 194



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 2/92 (2%)

Query: 105 SLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
            +R+LD     L +LP+++  L+NLE LN+  N   L  LP  IG L +L  LD++ NKI
Sbjct: 47  EVRILDLSRKQLTTLPKEIGQLVNLERLNLRDN--KLTNLPEEIGELENLKILDITRNKI 104

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           +T P     L+ L+ L L GN L + P ++ E
Sbjct: 105 STFPKEFWKLKNLEVLLLNGNSLSNLPEEIGE 136



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 64/112 (57%), Gaps = 2/112 (1%)

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           ++ L ++  ++  LP+ +  L +L  L+ R N L +LPE++  L NL++L+I++N   + 
Sbjct: 48  VRILDLSRKQLTTLPKEIGQLVNLERLNLRDNKLTNLPEEIGELENLKILDITRN--KIS 105

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           T P     L +L  L ++ N ++ LP+ IG L KL  L L  N L + P ++
Sbjct: 106 TFPKEFWKLKNLEVLLLNGNSLSNLPEEIGELEKLGILYLNNNQLTTLPKEI 157


>gi|260812964|ref|XP_002601190.1| hypothetical protein BRAFLDRAFT_214691 [Branchiostoma floridae]
 gi|229286481|gb|EEN57202.1| hypothetical protein BRAFLDRAFT_214691 [Branchiostoma floridae]
          Length = 191

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/191 (35%), Positives = 108/191 (56%), Gaps = 3/191 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L++   QL  LP  +G L+KL+ L +S N L++LP  +    S++ L     +L  L   
Sbjct: 4   LNLSHCQLHTLPPEVGRLTKLEYLTLSYNPLQTLPADVAMLTSIKHLKLYNCELHTL-QP 62

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           + + L  L++L ++ N I  LP  +  LT+++ LD     L++LP ++  L  LE L++ 
Sbjct: 63  VLWTLTQLESLDLSSNPIQTLPAEVGQLTNVKHLDLSYCNLRTLPPEVGRLTQLEWLDL- 121

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
           Q  Q L TLP  +G L  L  LDVS+N++  L D +G L  L  + ++GNPL+ PP  V 
Sbjct: 122 QKCQ-LRTLPPQVGRLAQLERLDVSFNQLQILSDEVGQLDILCHIDVKGNPLIKPPSAVC 180

Query: 196 EQGLSAVKGYL 206
            QG++A++ Y 
Sbjct: 181 SQGITAIRQYF 191



 Score = 43.9 bits (102), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L NV  LD+    L+ LP  +G L++L+ LD+    L +LP  +     LE L+ +FN
Sbjct: 88  GQLTNVKHLDLSYCNLRTLPPEVGRLTQLEWLDLQKCQLRTLPPQVGRLAQLERLDVSFN 147

Query: 68  KLRQLPDTIG 77
           +L+ L D +G
Sbjct: 148 QLQILSDEVG 157


>gi|341940994|sp|Q80TH2.3|LAP2_MOUSE RecName: Full=Protein LAP2; AltName: Full=Densin-180-like protein;
           AltName: Full=Erbb2-interacting protein; Short=Erbin
          Length = 1402

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 105/183 (57%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LDVS N +E + + I  C +L++   + N L+QLP+TIG  L
Sbjct: 217 NRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIG-SL 275

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  Y
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHN--Y 333

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q L
Sbjct: 334 LQQLPPEIGNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQL 393

Query: 200 SAV 202
           +A+
Sbjct: 394 TAM 396



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 111/204 (54%), Gaps = 13/204 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG LR+L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSAVK 203
           L +  N +     ++VE+G+S  +
Sbjct: 235 LDVSKNNI-----EMVEEGISTCE 253



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 86/144 (59%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I   RS+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N++T + + N +  LP  + +  ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNMRTFAADHNYLQQLPPEIGNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS ++ +
Sbjct: 201 -EVLEQ-LSGLREF 212



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  L+   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L S+ ELD S+N+I
Sbjct: 254 NLQDFLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLRSIEELDCSFNEI 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  ++  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNMRTFAADHNYLQQLPPEI 341



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 77/137 (56%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++ + L NV  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    ++ 
Sbjct: 267 QLPETIGS-LKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++CNK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-NWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|255084227|ref|XP_002508688.1| predicted protein [Micromonas sp. RCC299]
 gi|226523965|gb|ACO69946.1| predicted protein [Micromonas sp. RCC299]
          Length = 518

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/188 (39%), Positives = 110/188 (58%), Gaps = 4/188 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNL-LESLPKTIENCRSLEELNANF 66
            +L ++V L++ +N+L  LP  IG L+ L  L++  N  L  LP  I    SL ELN   
Sbjct: 152 GQLASLVELNLGNNRLTSLPAEIGQLTSLVELNLDDNTPLTELPAEIGQLTSLRELNLCN 211

Query: 67  NKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENL 126
           N+L  LP  IG +L +LK L ++ N++  LP  +  L SL  L+   N L S+P ++  L
Sbjct: 212 NRLTSLPAEIG-QLTSLKRLFLHRNQLTSLPAEIGQLASLVELNLHRNQLTSVPAEIGQL 270

Query: 127 INLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
            +L+ L + +N   L +LP  IG L SLV+LD++ NK+T+LP  IG L  L++L L GN 
Sbjct: 271 TSLKRLFLHRN--QLTSLPAEIGQLTSLVKLDLTTNKLTSLPAEIGQLESLRELRLSGNQ 328

Query: 187 LVSPPMDV 194
           L S P ++
Sbjct: 329 LRSVPAEI 336



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/177 (36%), Positives = 99/177 (55%), Gaps = 3/177 (1%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           +H NQL  LP  IG L+ L  LD++ N L SLP  I    SL EL  + N+LR +P  IG
Sbjct: 278 LHRNQLTSLPAEIGQLTSLVKLDLTTNKLTSLPAEIGQLESLRELRLSGNQLRSVPAEIG 337

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
            +L +L  L +  N++  +P  +  LTSL  L+   N L S+P ++  L +L+ L + +N
Sbjct: 338 -QLTSLTLLDLGNNQLTSMPAEIGQLTSLVELNLGGNHLTSMPAEIGQLASLKRLFLHRN 396

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
              L ++P  IG L SL  L +  N++ ++P   G L  L++L L+ N L S P ++
Sbjct: 397 --QLTSMPAEIGQLTSLEMLHLGGNQLMSVPAEAGQLTSLKRLLLDRNQLTSVPAEI 451



 Score = 90.1 bits (222), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 73/174 (41%), Positives = 97/174 (55%), Gaps = 5/174 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           NQL  LP  IG L+ LK L + GN L SLP  I    SL  L  + ++L  LP  IG +L
Sbjct: 6   NQLTSLPAEIGQLTSLKELRLHGNGLTSLPAEIGQLTSLTLLILDHDELTSLPAEIG-QL 64

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            +L  L ++ N++  LP  +  LTSL  LD     L+  P  LE L + E LN+  N   
Sbjct: 65  ASLVELDLSYNQLTSLPAEIGQLTSLVKLDLT-TWLEEPPSLLEELDSWE-LNLGNN--R 120

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L +LP  IG L SLVEL++ +NK+T LP  IG L  L +L+L  N L S P ++
Sbjct: 121 LTSLPAEIGQLTSLVELNLEHNKLTELPAEIGQLASLVELNLGNNRLTSLPAEI 174



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 96/164 (58%), Gaps = 3/164 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++ +LD+ +NQL  +P  IG L+ L  L++ GN L S+P  I    SL+ L  + N
Sbjct: 337 GQLTSLTLLDLGNNQLTSMPAEIGQLTSLVELNLGGNHLTSMPAEIGQLASLKRLFLHRN 396

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  IG +L +L+ L +  N+++ +P     LTSL+ L    N L S+P ++  L 
Sbjct: 397 QLTSMPAEIG-QLTSLEMLHLGGNQLMSVPAEAGQLTSLKRLLLDRNQLTSVPAEIGQLT 455

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           +LE+L++  N   L ++P  IG L SL  L +  N++T+LP +I
Sbjct: 456 SLEMLHLGGN--QLTSVPAEIGQLTSLWTLHLGGNQLTSLPAAI 497



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 100/200 (50%), Gaps = 23/200 (11%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +H N L  LP  IG L+ L +L +  + L SLP  I    SL EL+ ++N+L  LP  
Sbjct: 24  LRLHGNGLTSLPAEIGQLTSLTLLILDHDELTSLPAEIGQLASLVELDLSYNQLTSLPAE 83

Query: 76  IG--------------------FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNC 115
           IG                     E ++   L++  N++  LP  +  LTSL  L+   N 
Sbjct: 84  IGQLTSLVKLDLTTWLEEPPSLLEELDSWELNLGNNRLTSLPAEIGQLTSLVELNLEHNK 143

Query: 116 LKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK-ITTLPDSIGCL 174
           L  LP ++  L +L  LN+  N   L +LP  IG L SLVEL++  N  +T LP  IG L
Sbjct: 144 LTELPAEIGQLASLVELNLGNN--RLTSLPAEIGQLTSLVELNLDDNTPLTELPAEIGQL 201

Query: 175 RKLQKLSLEGNPLVSPPMDV 194
             L++L+L  N L S P ++
Sbjct: 202 TSLRELNLCNNRLTSLPAEI 221



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/93 (45%), Positives = 57/93 (61%), Gaps = 2/93 (2%)

Query: 90  CNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIG 149
           CN++  LP  +  LTSL+ L    N L SLP ++  L +L +L +  +   L +LP  IG
Sbjct: 5   CNQLTSLPAEIGQLTSLKELRLHGNGLTSLPAEIGQLTSLTLLILDHD--ELTSLPAEIG 62

Query: 150 LLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
            L SLVELD+SYN++T+LP  IG L  L KL L
Sbjct: 63  QLASLVELDLSYNQLTSLPAEIGQLTSLVKLDL 95



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 1/109 (0%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           +H NQL  +P  IG L+ L++L + GN L S+P       SL+ L  + N+L  +P  IG
Sbjct: 393 LHRNQLTSMPAEIGQLTSLEMLHLGGNQLMSVPAEAGQLTSLKRLLLDRNQLTSVPAEIG 452

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENL 126
            +L +L+ L +  N++  +P  +  LTSL  L    N L SLP  + +L
Sbjct: 453 -QLTSLEMLHLGGNQLTSVPAEIGQLTSLWTLHLGGNQLTSLPAAIRDL 500


>gi|418734750|ref|ZP_13291181.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410772622|gb|EKR52663.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 288

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/181 (40%), Positives = 107/181 (59%), Gaps = 6/181 (3%)

Query: 12  NVVVLDVHSNQ---LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +V+VL+   N+   LK LP  IG L  LK L +S N + +LP  I N ++L+ L+ N N+
Sbjct: 48  DVLVLNYRDNEENPLKTLPKEIGNLQNLKKLYLSANEITTLPPEIGNLKNLQVLSLNGNR 107

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  +P  IG  L NLK LSI  NK+  LP+ + +L +L+ L    N LK LP+++ NL  
Sbjct: 108 LETIPKEIG-NLKNLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRK 166

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ +++S N   L  LP  I  L SL+E+ +  N+ TTLP  IG L+ L+ L L  N L+
Sbjct: 167 LQRMHLSTN--ELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLI 224

Query: 189 S 189
           S
Sbjct: 225 S 225



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 110/188 (58%), Gaps = 3/188 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L + +N++  LP  IG L  L+VL ++GN LE++PK I N ++L+EL+  +N
Sbjct: 70  GNLQNLKKLYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWN 129

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL+ LP  IG  L NLK L ++ N++ ILPQ + +L  L+ +    N L  LP++++NL 
Sbjct: 130 KLQTLPKEIG-NLKNLKELYLSRNQLKILPQEIGNLRKLQRMHLSTNELTKLPQEIKNLE 188

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  + +  N     TLP  IG L +L  L +  N++ +L   IG L+ L++L LE N L
Sbjct: 189 SLLEIYLYDN--QFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELYLEENQL 246

Query: 188 VSPPMDVV 195
              P  + 
Sbjct: 247 TMLPKQIA 254



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 112/190 (58%), Gaps = 3/190 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+ VL ++ N+L+ +P  IG L  LK L +  N L++LPK I N ++L+EL  + N
Sbjct: 93  GNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTLPKEIGNLKNLKELYLSRN 152

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG  L  L+ + ++ N++  LPQ + +L SL  +    N   +LP+++ NL 
Sbjct: 153 QLKILPQEIG-NLRKLQRMHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLK 211

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L + +N Q +  LP  IG L +L EL +  N++T LP  I  L++L +LSL+GN  
Sbjct: 212 NLRNLVLGRN-QLISLLP-EIGNLKNLKELYLEENQLTMLPKQIAALKQLARLSLKGNQF 269

Query: 188 VSPPMDVVEQ 197
            S   + +++
Sbjct: 270 PSEEKERIQR 279



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 2/85 (2%)

Query: 110 DARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPD 169
           D   N LK+LP+++ NL NL+ L +S N   + TLP  IG L +L  L ++ N++ T+P 
Sbjct: 56  DNEENPLKTLPKEIGNLQNLKKLYLSAN--EITTLPPEIGNLKNLQVLSLNGNRLETIPK 113

Query: 170 SIGCLRKLQKLSLEGNPLVSPPMDV 194
            IG L+ L++LS+E N L + P ++
Sbjct: 114 EIGNLKNLKELSIEWNKLQTLPKEI 138



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 1/78 (1%)

Query: 118 SLPEDLENLINLEVLNISQNFQY-LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
            L E  +N  ++ VLN   N +  L+TLP  IG L +L +L +S N+ITTLP  IG L+ 
Sbjct: 38  DLEEAFKNPKDVLVLNYRDNEENPLKTLPKEIGNLQNLKKLYLSANEITTLPPEIGNLKN 97

Query: 177 LQKLSLEGNPLVSPPMDV 194
           LQ LSL GN L + P ++
Sbjct: 98  LQVLSLNGNRLETIPKEI 115


>gi|418716730|ref|ZP_13276693.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|418731306|ref|ZP_13289712.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|421114609|ref|ZP_15575025.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410013897|gb|EKO71972.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410774031|gb|EKR54051.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410787501|gb|EKR81233.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 219

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/158 (43%), Positives = 96/158 (60%), Gaps = 3/158 (1%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           +++++LD+S   L +LPK I    +LE LN   NKL  LP+ IG EL NLK L I  NKI
Sbjct: 46  NEVRILDLSRKQLTTLPKEIGQLVNLERLNLRDNKLTNLPEEIG-ELENLKILDITRNKI 104

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
              P+    L +L VL    N L +LPE++  L  L +L ++ N   L TLP  IG L +
Sbjct: 105 STFPKEFWKLKNLEVLLLNGNSLSNLPEEIGELEKLGILYLNNN--QLTTLPKEIGQLEN 162

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LV L +S NK+T++PD +G L+KL+ L+L  NP ++ P
Sbjct: 163 LVSLSLSSNKLTSIPDELGQLKKLRILNLWDNPTLTTP 200



 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 73/130 (56%), Gaps = 1/130 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L+N+  L++  N+L  LP  IG L  LK+LD++ N + + PK     ++LE L  N N
Sbjct: 66  GQLVNLERLNLRDNKLTNLPEEIGELENLKILDITRNKISTFPKEFWKLKNLEVLLLNGN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP+ IG EL  L  L +N N++  LP+ +  L +L  L    N L S+P++L  L 
Sbjct: 126 SLSNLPEEIG-ELEKLGILYLNNNQLTTLPKEIGQLENLVSLSLSSNKLTSIPDELGQLK 184

Query: 128 NLEVLNISQN 137
            L +LN+  N
Sbjct: 185 KLRILNLWDN 194



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 2/92 (2%)

Query: 105 SLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
            +R+LD     L +LP+++  L+NLE LN+  N   L  LP  IG L +L  LD++ NKI
Sbjct: 47  EVRILDLSRKQLTTLPKEIGQLVNLERLNLRDN--KLTNLPEEIGELENLKILDITRNKI 104

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           +T P     L+ L+ L L GN L + P ++ E
Sbjct: 105 STFPKEFWKLKNLEVLLLNGNSLSNLPEEIGE 136



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 64/112 (57%), Gaps = 2/112 (1%)

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           ++ L ++  ++  LP+ +  L +L  L+ R N L +LPE++  L NL++L+I++N   + 
Sbjct: 48  VRILDLSRKQLTTLPKEIGQLVNLERLNLRDNKLTNLPEEIGELENLKILDITRN--KIS 105

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           T P     L +L  L ++ N ++ LP+ IG L KL  L L  N L + P ++
Sbjct: 106 TFPKEFWKLKNLEVLLLNGNSLSNLPEEIGELEKLGILYLNNNQLTTLPKEI 157


>gi|45657064|ref|YP_001150.1| hypothetical protein [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|421087265|ref|ZP_15548106.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421105036|ref|ZP_15565629.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45600301|gb|AAS69787.1| cytoplasmic membrane protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410365346|gb|EKP20741.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410430374|gb|EKP74744.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|456987834|gb|EMG23058.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 288

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 113/190 (59%), Gaps = 3/190 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+ VL ++ N+L+ +P  IG L KLK L +  N L++LPK I N ++L+EL  + N
Sbjct: 93  GNLKNLQVLSLNGNRLETIPKEIGNLKKLKELSIEWNKLQTLPKEIGNLKNLKELYLSRN 152

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG  L  L+ + ++ N++  LPQ + +L SL  +    N   +LP+++ NL 
Sbjct: 153 QLKILPQEIG-NLRKLQRIHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLK 211

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L + +N Q +  LP  IG L +L EL +  N++T LP  I  L++L +LSL+GN  
Sbjct: 212 NLRNLVLGRN-QLISLLP-EIGNLKNLKELYLEENQLTMLPKQIAALKQLARLSLKGNQF 269

Query: 188 VSPPMDVVEQ 197
            S   + +++
Sbjct: 270 PSEEKERIQR 279



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 109/188 (57%), Gaps = 3/188 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L + +N++  LP  IG L  L+VL ++GN LE++PK I N + L+EL+  +N
Sbjct: 70  GNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLKKLKELSIEWN 129

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL+ LP  IG  L NLK L ++ N++ ILPQ + +L  L+ +    N L  LP++++NL 
Sbjct: 130 KLQTLPKEIG-NLKNLKELYLSRNQLKILPQEIGNLRKLQRIHLSTNELTKLPQEIKNLE 188

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  + +  N     TLP  IG L +L  L +  N++ +L   IG L+ L++L LE N L
Sbjct: 189 SLLEIYLYDN--QFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELYLEENQL 246

Query: 188 VSPPMDVV 195
              P  + 
Sbjct: 247 TMLPKQIA 254



 Score = 97.1 bits (240), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 73/181 (40%), Positives = 106/181 (58%), Gaps = 6/181 (3%)

Query: 12  NVVVLDVHSNQ---LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +V+VL+   N+   LK LP  IG L  LK L +S N + +LP  I N ++L+ L+ N N+
Sbjct: 48  DVLVLNYRDNEENPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNR 107

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  +P  IG  L  LK LSI  NK+  LP+ + +L +L+ L    N LK LP+++ NL  
Sbjct: 108 LETIPKEIG-NLKKLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRK 166

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ +++S N   L  LP  I  L SL+E+ +  N+ TTLP  IG L+ L+ L L  N L+
Sbjct: 167 LQRIHLSTN--ELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLI 224

Query: 189 S 189
           S
Sbjct: 225 S 225



 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 55/85 (64%), Gaps = 2/85 (2%)

Query: 110 DARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPD 169
           D   N LK+LP+++ NL NL+ L +S N   + TLP  IG L +L  L ++ N++ T+P 
Sbjct: 56  DNEENPLKTLPKEIGNLQNLKELYLSAN--EITTLPPEIGNLKNLQVLSLNGNRLETIPK 113

Query: 170 SIGCLRKLQKLSLEGNPLVSPPMDV 194
            IG L+KL++LS+E N L + P ++
Sbjct: 114 EIGNLKKLKELSIEWNKLQTLPKEI 138



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 1/78 (1%)

Query: 118 SLPEDLENLINLEVLNISQNFQY-LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
            L E  +N  ++ VLN   N +  L+TLP  IG L +L EL +S N+ITTLP  IG L+ 
Sbjct: 38  DLEEAFKNPKDVLVLNYRDNEENPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKN 97

Query: 177 LQKLSLEGNPLVSPPMDV 194
           LQ LSL GN L + P ++
Sbjct: 98  LQVLSLNGNRLETIPKEI 115


>gi|418688836|ref|ZP_13249971.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400361994|gb|EJP17947.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 333

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 112/207 (54%), Gaps = 22/207 (10%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VLD+   +LK LP  IG L  L+ L++  N L ++ K IE  ++L+ L+   N++ 
Sbjct: 48  LDVRVLDLSEQKLKALPKKIGQLKNLQELNLDANQLTTILKEIEQLKNLQVLDFGSNQIT 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            L   IG +L NLK L +N N++  LP+ +  L +L+ L+   N L +LP+++  L NL+
Sbjct: 108 TLSQEIG-QLQNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQ 166

Query: 131 VLNISQN--------------FQYLE-------TLPYSIGLLMSLVELDVSYNKITTLPD 169
            L +S+N               Q L        TLP  I  L +L EL +S N++ TLP 
Sbjct: 167 ELYLSENQLMTLPKEIGQLEKLQELNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPK 226

Query: 170 SIGCLRKLQKLSLEGNPLVSPPMDVVE 196
            IG L KLQKL L  N L + P ++ +
Sbjct: 227 EIGQLEKLQKLYLNANQLTTIPNEIAQ 253



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/241 (36%), Positives = 132/241 (54%), Gaps = 13/241 (5%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ VLD  SNQ+  L   IG L  LKVL ++ N L +LPK I   ++L+ LN   N+
Sbjct: 92  QLKNLQVLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQ 151

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  I  +L NL+ L ++ N+++ LP+ +  L  L+ L+   N L +LP+++  L N
Sbjct: 152 LITLPKEIA-QLKNLQELYLSENQLMTLPKEIGQLEKLQELNLWNNQLITLPKEIAQLKN 210

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S+N   L TLP  IG L  L +L ++ N++TT+P+ I  L+ LQ L L  N   
Sbjct: 211 LQELYLSEN--QLMTLPKEIGQLEKLQKLYLNANQLTTIPNEIAQLQNLQVLFLSYNQFK 268

Query: 189 SPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGALRNHRS--EERER 246
           + P   VE G       L+   N     PK+   +G+L    T    LRN++   EE+ER
Sbjct: 269 TIP---VEFGQLKNLQELNLDANQLTTIPKE---IGQLQNLQTL--YLRNNQFSIEEKER 320

Query: 247 F 247
            
Sbjct: 321 I 321



 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL +++NQL  LP  IG L  L+ L++  N L +LPK I   ++L+EL  + N
Sbjct: 114 GQLQNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSEN 173

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L  L+ L++  N+++ LP+ +  L +L+ L    N L +LP+++  L 
Sbjct: 174 QLMTLPKEIG-QLEKLQELNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLE 232

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L ++ N   L T+P  I  L +L  L +SYN+  T+P   G L+ LQ+L+L+ N L
Sbjct: 233 KLQKLYLNAN--QLTTIPNEIAQLQNLQVLFLSYNQFKTIPVEFGQLKNLQELNLDANQL 290

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 291 TTIPKEI 297



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 102/178 (57%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++ +NQL  LP  I  L  L+ L +S N L +LPK I     L+ELN   N
Sbjct: 137 GQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQELNLWNN 196

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L ++ N+++ LP+ +  L  L+ L    N L ++P ++  L 
Sbjct: 197 QLITLPKEIA-QLKNLQELYLSENQLMTLPKEIGQLEKLQKLYLNANQLTTIPNEIAQLQ 255

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+VL +S N    +T+P   G L +L EL++  N++TT+P  IG L+ LQ L L  N
Sbjct: 256 NLQVLFLSYN--QFKTIPVEFGQLKNLQELNLDANQLTTIPKEIGQLQNLQTLYLRNN 311



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 112/194 (57%), Gaps = 8/194 (4%)

Query: 36  LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           ++VLD+S   L++LPK I   ++L+ELN + N+L  +   I  +L NL+ L    N+I  
Sbjct: 50  VRVLDLSEQKLKALPKKIGQLKNLQELNLDANQLTTILKEIE-QLKNLQVLDFGSNQITT 108

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L Q +  L +L+VL    N L +LP+++  L NL+ LN+  N   L TLP  I  L +L 
Sbjct: 109 LSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNN--QLITLPKEIAQLKNLQ 166

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGLSAVKGYLSEKMNNDH 214
           EL +S N++ TLP  IG L KLQ+L+L  N L++ P ++ + + L  +  YLSE  N   
Sbjct: 167 ELYLSENQLMTLPKEIGQLEKLQELNLWNNQLITLPKEIAQLKNLQEL--YLSE--NQLM 222

Query: 215 KSPKKKSWVGKLVK 228
             PK+   + KL K
Sbjct: 223 TLPKEIGQLEKLQK 236


>gi|417783921|ref|ZP_12431633.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|418699650|ref|ZP_13260605.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|409952752|gb|EKO07259.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|410761334|gb|EKR27517.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 288

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/181 (40%), Positives = 107/181 (59%), Gaps = 6/181 (3%)

Query: 12  NVVVLDVHSNQ---LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +V+VL+   N+   LK LP  IG L  LK L +S N + +LP  I N ++L+ L+ N N+
Sbjct: 48  DVLVLNYRDNEENPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNR 107

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  +P  IG  L NLK LSI  NK+  LP+ + +L +L+ L    N LK LP+++ NL  
Sbjct: 108 LETIPKEIG-NLKNLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRK 166

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ +++S N   L  LP  I  L SL+E+ +  N+ TTLP  IG L+ L+ L L  N L+
Sbjct: 167 LQRIHLSTN--ELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLI 224

Query: 189 S 189
           S
Sbjct: 225 S 225



 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 110/188 (58%), Gaps = 3/188 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L + +N++  LP  IG L  L+VL ++GN LE++PK I N ++L+EL+  +N
Sbjct: 70  GNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWN 129

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL+ LP  IG  L NLK L ++ N++ ILPQ + +L  L+ +    N L  LP++++NL 
Sbjct: 130 KLQTLPKEIG-NLKNLKELYLSRNQLKILPQEIGNLRKLQRIHLSTNELTKLPQEIKNLE 188

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  + +  N     TLP  IG L +L  L +  N++ +L   IG L+ L++L LE N L
Sbjct: 189 SLLEIYLYDN--QFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELYLEENQL 246

Query: 188 VSPPMDVV 195
              P  + 
Sbjct: 247 TMLPEQIA 254



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 113/190 (59%), Gaps = 3/190 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+ VL ++ N+L+ +P  IG L  LK L +  N L++LPK I N ++L+EL  + N
Sbjct: 93  GNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTLPKEIGNLKNLKELYLSRN 152

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG  L  L+ + ++ N++  LPQ + +L SL  +    N   +LP+++ NL 
Sbjct: 153 QLKILPQEIG-NLRKLQRIHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLK 211

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L + +N Q +  LP  IG L +L EL +  N++T LP+ I  L++L +LSL+GN  
Sbjct: 212 NLRNLVLGRN-QLISLLP-EIGNLKNLKELYLEENQLTMLPEQIAALKQLARLSLKGNQF 269

Query: 188 VSPPMDVVEQ 197
            S   + +++
Sbjct: 270 PSEEKERIQR 279



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 2/85 (2%)

Query: 110 DARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPD 169
           D   N LK+LP+++ NL NL+ L +S N   + TLP  IG L +L  L ++ N++ T+P 
Sbjct: 56  DNEENPLKTLPKEIGNLQNLKELYLSAN--EITTLPPEIGNLKNLQVLSLNGNRLETIPK 113

Query: 170 SIGCLRKLQKLSLEGNPLVSPPMDV 194
            IG L+ L++LS+E N L + P ++
Sbjct: 114 EIGNLKNLKELSIEWNKLQTLPKEI 138



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 1/78 (1%)

Query: 118 SLPEDLENLINLEVLNISQNFQY-LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
            L E  +N  ++ VLN   N +  L+TLP  IG L +L EL +S N+ITTLP  IG L+ 
Sbjct: 38  DLEEAFKNPKDVLVLNYRDNEENPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKN 97

Query: 177 LQKLSLEGNPLVSPPMDV 194
           LQ LSL GN L + P ++
Sbjct: 98  LQVLSLNGNRLETIPKEI 115


>gi|16924000|ref|NP_476483.1| leucine-rich repeat-containing protein 7 [Rattus norvegicus]
 gi|1657758|gb|AAC52881.1| densin-180 [Rattus norvegicus]
 gi|149026336|gb|EDL82579.1| rCG28757, isoform CRA_b [Rattus norvegicus]
          Length = 1495

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 108/184 (58%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP SIG L  L  LD+S N +E++   I  C +LE+
Sbjct: 204 LPEVLD-QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALED 262

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+QLPD+IG  L  L TL ++ N++ +LP ++ +L+ L   D   N L+SLP 
Sbjct: 263 LLLSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPP 321

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L + +NF  L  LP  IG   ++  + +  NK+  LP+ IG +++L+ L+
Sbjct: 322 TIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLN 379

Query: 182 LEGN 185
           L  N
Sbjct: 380 LSDN 383



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 108/233 (46%), Gaps = 50/233 (21%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  LK LD+S N ++  P+ I+ C+ L 
Sbjct: 64  EELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLT 123

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   L  LR+L+ R N LK+L
Sbjct: 124 IIEASVNPISKLPD--GFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTL 181

Query: 120 PEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELD 158
           P+ +  L  LE L++  N                        L+ LP SIG L  LV LD
Sbjct: 182 PKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD 241

Query: 159 VSYNKITT-----------------------LPDSIGCLRKLQKLSLEGNPLV 188
           +S N+I T                       LPDSIG L+KL  L ++ N L 
Sbjct: 242 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLT 294



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP+SIG L KL  L V  N L  LP TI N   LEE + + N+L  LP TIG+ 
Sbjct: 267 SNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGY- 325

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+TL+++ N +  LP+ +    ++ V+  R N L+ LPE++  +  L VLN+S N  
Sbjct: 326 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDN-- 383

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+ LP+S   L  L  L +S N+   L
Sbjct: 384 RLKNLPFSFTKLKELAALWLSDNQSKAL 411



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 69  LRQLP-DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P +   FE   L+ L ++ N+I  LP+ L +  +LR L    N L SLP  + +L+
Sbjct: 39  LQQVPKEVFNFERT-LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLV 97

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           NL+ L+IS+N   ++  P +I     L  ++ S N I+ LPD    L  L +L L
Sbjct: 98  NLKELDISKNG--VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYL 150



 Score = 40.4 bits (93), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 38/61 (62%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP  IG + +L+VL++S N L++LP +    + L  L  + N+ + 
Sbjct: 351 NVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKA 410

Query: 72  L 72
           L
Sbjct: 411 L 411


>gi|393912071|gb|EJD76579.1| leucine-rich repeat-containing protein 1 [Loa loa]
          Length = 1426

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 97/178 (54%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A L  +  L++  N +  LP  I    +LK+LD+S N +  LP TI    S+  L  N  
Sbjct: 80  AHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPPTISQLTSMTSLGLNDI 139

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L Q+P  IG +L NL++L +  N +  +P S++ L  LR LD   N L  LP ++  L 
Sbjct: 140 SLTQMPHDIG-QLRNLRSLEVRENLLRTVPPSISQLKQLRRLDLGHNELDDLPNEISMLE 198

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NLE L + QN   LE LP SI    SL +LDVS NK+  LPD IG L KL  L++  N
Sbjct: 199 NLEELYVDQN--DLEALPESIVQCRSLEQLDVSENKLMLLPDEIGDLEKLDDLTVSQN 254



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 109/193 (56%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P S++ +L  +  LD+  N+L  LPN I  L  L+ L V  N LE+LP++I  CRSLE+
Sbjct: 167 VPPSIS-QLKQLRRLDLGHNELDDLPNEISMLENLEELYVDQNDLEALPESIVQCRSLEQ 225

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + NKL  LPD IG +L  L  L+++ N + +LP S+  L  L +L A  N +  L  
Sbjct: 226 LDVSENKLMLLPDEIG-DLEKLDDLTVSQNCLQVLPSSIGRLKKLSMLKADRNAITQLTP 284

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + +   L  + +++N   L  +P S+G L SL  L++  N++  LP +IG    L  LS
Sbjct: 285 AIGSCHALTEIYLTENL--LTEIPSSLGNLKSLRTLNLDKNQLKELPPTIGGCTSLSVLS 342

Query: 182 LEGNPLVSPPMDV 194
           L  N +   P+++
Sbjct: 343 LRDNLIEQLPLEI 355



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 100/180 (55%), Gaps = 3/180 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L+V  N L+ +P SI  L +L+ LD+  N L+ LP  I    +LEEL  + N
Sbjct: 149 GQLRNLRSLEVRENLLRTVPPSISQLKQLRRLDLGHNELDDLPNEISMLENLEELYVDQN 208

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP++I  +  +L+ L ++ NK+++LP  +  L  L  L    NCL+ LP  +  L 
Sbjct: 209 DLEALPESI-VQCRSLEQLDVSENKLMLLPDEIGDLEKLDDLTVSQNCLQVLPSSIGRLK 267

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L +L   +N   +  L  +IG   +L E+ ++ N +T +P S+G L+ L+ L+L+ N L
Sbjct: 268 KLSMLKADRN--AITQLTPAIGSCHALTEIYLTENLLTEIPSSLGNLKSLRTLNLDKNQL 325



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 98/189 (51%), Gaps = 5/189 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           AR L  + LD   N +K L   +    KLK+L +S N +  LP  I +   LEELN   N
Sbjct: 36  ARTLEEMYLDC--NHIKDLDKPLFRCRKLKILSLSENEVIRLPSDIAHLTYLEELNLKGN 93

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            +  LP+ I    I LK L ++ N I  LP +++ LTS+  L      L  +P D+  L 
Sbjct: 94  DVSDLPEEIK-NCIQLKILDLSSNPITRLPPTISQLTSMTSLGLNDISLTQMPHDIGQLR 152

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L + +N   L T+P SI  L  L  LD+ +N++  LP+ I  L  L++L ++ N L
Sbjct: 153 NLRSLEVRENL--LRTVPPSISQLKQLRRLDLGHNELDDLPNEISMLENLEELYVDQNDL 210

Query: 188 VSPPMDVVE 196
            + P  +V+
Sbjct: 211 EALPESIVQ 219



 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 97/175 (55%), Gaps = 5/175 (2%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIE-NCRSLEELNANFNKLRQLPDTIGFELI 81
             CLP    C  ++ +LD     L+S+P  I+ N R+LEE+  + N ++ L D   F   
Sbjct: 3   FSCLP-FFACNRQVDMLDRRQCNLQSIPHDIDRNARTLEEMYLDCNHIKDL-DKPLFRCR 60

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
            LK LS++ N+++ LP  + HLT L  L+ + N +  LPE+++N I L++L++S N   +
Sbjct: 61  KLKILSLSENEVIRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSN--PI 118

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
             LP +I  L S+  L ++   +T +P  IG LR L+ L +  N L + P  + +
Sbjct: 119 TRLPPTISQLTSMTSLGLNDISLTQMPHDIGQLRNLRSLEVRENLLRTVPPSISQ 173



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 112/219 (51%), Gaps = 25/219 (11%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L V  N L+ LP+SIG L KL +L    N +  L   I +C +L E+    N L ++P +
Sbjct: 249 LTVSQNCLQVLPSSIGRLKKLSMLKADRNAITQLTPAIGSCHALTEIYLTENLLTEIPSS 308

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           +G  L +L+TL+++ N++  LP ++   TSL VL  R N ++ LP ++  L NL VL++ 
Sbjct: 309 LG-NLKSLRTLNLDKNQLKELPPTIGGCTSLSVLSLRDNLIEQLPLEIGRLENLRVLDVC 367

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            N   L  LP+++ +L  L  L +S N+           + + KL  E +P         
Sbjct: 368 NN--RLNYLPFTVNVLFKLRALWLSENQS----------QAMLKLQTEQDP--------- 406

Query: 196 EQGLSAVKGYLSEKMNND--HKSPKKKSWVGK-LVKYGT 231
             G+  +  YL  + N+    ++P  +S++G   V +G+
Sbjct: 407 RTGIKVLTCYLLPQSNSQLVEQAPPNRSFIGGPKVHFGS 445



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 2/91 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP SL   L ++  L++  NQLK LP +IG  + L VL +  NL+E LP  I    +L  
Sbjct: 305 IPSSL-GNLKSLRTLNLDKNQLKELPPTIGGCTSLSVLSLRDNLIEQLPLEIGRLENLRV 363

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNK 92
           L+   N+L  LP T+   L  L+ L ++ N+
Sbjct: 364 LDVCNNRLNYLPFTVNV-LFKLRALWLSENQ 393


>gi|334325168|ref|XP_001366860.2| PREDICTED: protein LAP2 isoform 1 [Monodelphis domestica]
          Length = 1448

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 105/183 (57%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LDVS N ++++ + I  C SL++L  + N L+QLP++IG  L
Sbjct: 217 NRLTFIPGLIGSLKQLTYLDVSKNNIDTVEEGISGCESLQDLLLSSNSLQQLPESIGL-L 275

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
             L TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  Y
Sbjct: 276 KKLTTLKIDENQLMYLPDSIGGLISIEELDCSFNEIEALPSSIGQLSNIRTFAADHN--Y 333

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG    +  L +  NK+ TLP+ +G ++KL+ ++L  N + + P    + Q L
Sbjct: 334 LQQLPPEIGFWKHVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRMKNLPFSFTKLQQL 393

Query: 200 SAV 202
           +A+
Sbjct: 394 TAM 396



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 110/204 (53%), Gaps = 13/204 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLNGLKEFWMDGNRLTFIPGLIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSAVK 203
           L +  N +     D VE+G+S  +
Sbjct: 235 LDVSKNNI-----DTVEEGISGCE 253



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 111/201 (55%), Gaps = 5/201 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD   N + ++ E +    
Sbjct: 195 EFTEVPEVLE-QLNGLKEFWMDGNRLTFIPGLIGSLKQLTYLDVSKNNIDTVEEGISGCE 253

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L +S N   L+ LP SIGLL  L  L +  N++  LPDSIG L  +++L    N +
Sbjct: 254 SLQDLLLSSN--SLQQLPESIGLLKKLTTLKIDENQLMYLPDSIGGLISIEELDCSFNEI 311

Query: 188 VSPPMDVVEQGLSAVKGYLSE 208
            + P  + +  LS ++ + ++
Sbjct: 312 EALPSSIGQ--LSNIRTFAAD 330



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 100/186 (53%), Gaps = 5/186 (2%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQ 197
            +V+EQ
Sbjct: 201 -EVLEQ 205



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 84/144 (58%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP SIG L KL  L +  N L  LP +I    S+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPESIGLLKKLTTLKIDENQLMYLPDSIGGLISIEELDCSFNEIEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N++T + + N +  LP  +     + VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LSNIRTFAADHNYLQQLPPEIGFWKHVTVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            ++ LP+S   L  L  + +S N+
Sbjct: 379 RMKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 95/180 (52%), Gaps = 3/180 (1%)

Query: 6   LTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNAN 65
           L   L  +  LDV  N +  +   I     L+ L +S N L+ LP++I   + L  L  +
Sbjct: 225 LIGSLKQLTYLDVSKNNIDTVEEGISGCESLQDLLLSSNSLQQLPESIGLLKKLTTLKID 284

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
            N+L  LPD+IG  LI+++ L  + N+I  LP S+  L+++R   A  N L+ LP ++  
Sbjct: 285 ENQLMYLPDSIGG-LISIEELDCSFNEIEALPSSIGQLSNIRTFAADHNYLQQLPPEIGF 343

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
             ++ VL +  N   LETLP  +G +  L  +++S N++  LP S   L++L  + L  N
Sbjct: 344 WKHVTVLFLHSN--KLETLPEEMGDMQKLKVINLSDNRMKNLPFSFTKLQQLTAMWLSDN 401



 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 75/137 (54%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PES+   L  +  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    ++ 
Sbjct: 267 QLPESI-GLLKKLTTLKIDENQLMYLPDSIGGLISIEELDCSFNEIEALPSSIGQLSNIR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IGF   ++  L ++ NK+  LP+ +  +  L+V++   N +K+LP
Sbjct: 326 TFAADHNYLQQLPPEIGF-WKHVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRMKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|456969516|gb|EMG10507.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 235

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/181 (40%), Positives = 107/181 (59%), Gaps = 6/181 (3%)

Query: 12  NVVVLDVHSNQ---LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +V+VL+   N+   LK LP  IG L  LK L +S N + +LP  I N ++L+ L+ N N+
Sbjct: 48  DVLVLNYRDNEENPLKTLPKEIGNLQNLKKLYLSANEITTLPPEIGNLKNLQVLSLNGNR 107

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  +P  IG  L NLK LSI  NK+  LP+ + +L +L+ L    N LK LP+++ NL  
Sbjct: 108 LETIPKEIG-NLKNLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRK 166

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ +++S N   L  LP  I  L SL+E+ +  N+ TTLP  IG L+ L+ L L  N L+
Sbjct: 167 LQRMHLSTN--ELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLI 224

Query: 189 S 189
           S
Sbjct: 225 S 225



 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 58/140 (41%), Positives = 83/140 (59%), Gaps = 8/140 (5%)

Query: 55  NCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLN 114
           N R  EE     N L+ LP  IG  L NLK L ++ N+I  LP  + +L +L+VL    N
Sbjct: 53  NYRDNEE-----NPLKTLPKEIG-NLQNLKKLYLSANEITTLPPEIGNLKNLQVLSLNGN 106

Query: 115 CLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCL 174
            L+++P+++ NL NL+ L+I  N   L+TLP  IG L +L EL +S N++  LP  IG L
Sbjct: 107 RLETIPKEIGNLKNLKELSIEWN--KLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNL 164

Query: 175 RKLQKLSLEGNPLVSPPMDV 194
           RKLQ++ L  N L   P ++
Sbjct: 165 RKLQRMHLSTNELTKLPQEI 184



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 1/78 (1%)

Query: 118 SLPEDLENLINLEVLNISQNFQY-LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
            L E  +N  ++ VLN   N +  L+TLP  IG L +L +L +S N+ITTLP  IG L+ 
Sbjct: 38  DLEEAFKNPKDVLVLNYRDNEENPLKTLPKEIGNLQNLKKLYLSANEITTLPPEIGNLKN 97

Query: 177 LQKLSLEGNPLVSPPMDV 194
           LQ LSL GN L + P ++
Sbjct: 98  LQVLSLNGNRLETIPKEI 115


>gi|124486885|ref|NP_001074827.1| leucine-rich repeat-containing protein 7 [Mus musculus]
          Length = 1542

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 108/184 (58%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP SIG L  L  LD+S N +E++   I  C +LE+
Sbjct: 204 LPEVLD-QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALED 262

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+QLPD+IG  L  L TL ++ N++ +LP ++ +L+ L   D   N L+SLP 
Sbjct: 263 LLLSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPP 321

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L + +NF  L  LP  IG   ++  + +  NK+  LP+ IG +++L+ L+
Sbjct: 322 TIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLN 379

Query: 182 LEGN 185
           L  N
Sbjct: 380 LSDN 383



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 108/233 (46%), Gaps = 50/233 (21%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  LK LD+S N ++  P+ I+ C+ L 
Sbjct: 64  EELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLT 123

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   L  LR+L+ R N LK+L
Sbjct: 124 IIEASVNPISKLPD--GFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTL 181

Query: 120 PEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELD 158
           P+ +  L  LE L++  N                        L+ LP SIG L  LV LD
Sbjct: 182 PKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD 241

Query: 159 VSYNKITT-----------------------LPDSIGCLRKLQKLSLEGNPLV 188
           +S N+I T                       LPDSIG L+KL  L ++ N L 
Sbjct: 242 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLT 294



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP+SIG L KL  L V  N L  LP TI N   LEE + + N+L  LP TIG+ 
Sbjct: 267 SNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGY- 325

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+TL+++ N +  LP+ +    ++ V+  R N L+ LPE++  +  L VLN+S N  
Sbjct: 326 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDN-- 383

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+ LP+S   L  L  L +S N+   L
Sbjct: 384 RLKNLPFSFTKLKELAALWLSDNQSKAL 411



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 69  LRQLP-DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P +   FE   L+ L ++ N+I  LP+ L +  +LR L    N L SLP  + +L+
Sbjct: 39  LQQVPKEVFNFERT-LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLV 97

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           NL+ L+IS+N   ++  P +I     L  ++ S N I+ LPD    L  L +L L
Sbjct: 98  NLKELDISKNG--VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYL 150



 Score = 40.4 bits (93), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 38/61 (62%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP  IG + +L+VL++S N L++LP +    + L  L  + N+ + 
Sbjct: 351 NVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKA 410

Query: 72  L 72
           L
Sbjct: 411 L 411


>gi|348678411|gb|EGZ18228.1| hypothetical protein PHYSODRAFT_502165 [Phytophthora sojae]
          Length = 884

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 76/242 (31%), Positives = 118/242 (48%), Gaps = 26/242 (10%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE+L A L ++  L + ++ L+ LP +IG LS+L  LD++ N L  LP ++     L  
Sbjct: 96  LPENLPAALPSLETLSLIADGLERLPETIGALSRLTELDLTKNRLRELPDSLTKLTGLTA 155

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L +LP+  G +L+ L  L +  N +  LP S+    S R  +   N L  LPE
Sbjct: 156 LNLSCNALEKLPEDFG-KLVKLDKLWLERNALTQLPVSIGGCRSARCANFSANKLTELPE 214

Query: 122 DLEN-----------------------LINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
            +                         L NL VL+ S+N   L  LP +IG + +L EL 
Sbjct: 215 TIGELTALTTLTLNLNELQELPDAVVFLPNLRVLHASRN--QLLKLPRAIGEMQALRELR 272

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPK 218
           + +N I  LP S   L  LQ L +E NPL  P  DVV +G+     ++ + +    +S +
Sbjct: 273 LDWNCIQELPFSFRALTGLQVLCMEQNPLRLPTSDVVARGVPETLRFMEKALVEFQRSSR 332

Query: 219 KK 220
           ++
Sbjct: 333 RE 334



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/135 (34%), Positives = 69/135 (51%), Gaps = 2/135 (1%)

Query: 57  RSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
           R L  L    + L +LP+ +   L +L+TLS+  + +  LP+++  L+ L  LD   N L
Sbjct: 81  RDLLALRITGHNLLELPENLPAALPSLETLSLIADGLERLPETIGALSRLTELDLTKNRL 140

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + LP+ L  L  L  LN+S N   LE LP   G L+ L +L +  N +T LP SIG  R 
Sbjct: 141 RELPDSLTKLTGLTALNLSCN--ALEKLPEDFGKLVKLDKLWLERNALTQLPVSIGGCRS 198

Query: 177 LQKLSLEGNPLVSPP 191
            +  +   N L   P
Sbjct: 199 ARCANFSANKLTELP 213


>gi|148679900|gb|EDL11847.1| mCG11661 [Mus musculus]
          Length = 1506

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 108/184 (58%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP SIG L  L  LD+S N +E++   I  C +LE+
Sbjct: 215 LPEVLD-QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALED 273

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+QLPD+IG  L  L TL ++ N++ +LP ++ +L+ L   D   N L+SLP 
Sbjct: 274 LLLSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPP 332

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L + +NF  L  LP  IG   ++  + +  NK+  LP+ IG +++L+ L+
Sbjct: 333 TIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLN 390

Query: 182 LEGN 185
           L  N
Sbjct: 391 LSDN 394



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 108/233 (46%), Gaps = 50/233 (21%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  LK LD+S N ++  P+ I+ C+ L 
Sbjct: 75  EELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLT 134

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   L  LR+L+ R N LK+L
Sbjct: 135 IIEASVNPISKLPD--GFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTL 192

Query: 120 PEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELD 158
           P+ +  L  LE L++  N                        L+ LP SIG L  LV LD
Sbjct: 193 PKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD 252

Query: 159 VSYNKITT-----------------------LPDSIGCLRKLQKLSLEGNPLV 188
           +S N+I T                       LPDSIG L+KL  L ++ N L 
Sbjct: 253 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLT 305



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP+SIG L KL  L V  N L  LP TI N   LEE + + N+L  LP TIG+ 
Sbjct: 278 SNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGY- 336

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+TL+++ N +  LP+ +    ++ V+  R N L+ LPE++  +  L VLN+S N  
Sbjct: 337 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDN-- 394

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+ LP+S   L  L  L +S N+   L
Sbjct: 395 RLKNLPFSFTKLKELAALWLSDNQSKAL 422



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 69  LRQLP-DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P +   FE   L+ L ++ N+I  LP+ L +  +LR L    N L SLP  + +L+
Sbjct: 50  LQQVPKEVFNFERT-LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLV 108

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           NL+ L+IS+N   ++  P +I     L  ++ S N I+ LPD    L  L +L L
Sbjct: 109 NLKELDISKNG--VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYL 161



 Score = 40.4 bits (93), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 38/61 (62%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP  IG + +L+VL++S N L++LP +    + L  L  + N+ + 
Sbjct: 362 NVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKA 421

Query: 72  L 72
           L
Sbjct: 422 L 422


>gi|54607112|ref|NP_067538.2| protein LAP2 isoform 2 [Mus musculus]
          Length = 1376

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 105/183 (57%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LDVS N +E + + I  C +L++   + N L+QLP+TIG  L
Sbjct: 217 NRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIG-SL 275

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  Y
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHN--Y 333

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q L
Sbjct: 334 LQQLPPEIGNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQL 393

Query: 200 SAV 202
           +A+
Sbjct: 394 TAM 396



 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 111/204 (54%), Gaps = 13/204 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG LR+L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSAVK 203
           L +  N +     ++VE+G+S  +
Sbjct: 235 LDVSKNNI-----EMVEEGISTCE 253



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 86/144 (59%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I   RS+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N++T + + N +  LP  + +  ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNMRTFAADHNYLQQLPPEIGNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS ++ +
Sbjct: 201 -EVLEQ-LSGLREF 212



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  L+   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L S+ ELD S+N+I
Sbjct: 254 NLQDFLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLRSIEELDCSFNEI 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  ++  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNMRTFAADHNYLQQLPPEI 341



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 77/137 (56%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++ + L NV  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    ++ 
Sbjct: 267 QLPETIGS-LKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++CNK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-NWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|418728081|ref|ZP_13286661.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410777126|gb|EKR57094.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 240

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/175 (38%), Positives = 103/175 (58%), Gaps = 3/175 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL +   +LK LP  IG L  L++LD+S N L  LPK I   ++L+EL  N+N+L 
Sbjct: 47  LDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLT 106

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
             P  I  +L +L  L ++ N+++ LP+ +  L  L+ L    N L ++P ++  L NL+
Sbjct: 107 TFPKEIE-QLKSLHKLYLSENQLMTLPKEIGQLEKLQKLYLNANQLTTIPNEIAQLQNLQ 165

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           VL +S N    +T+P   G L +L EL++  N++TT+P  IG L+ LQ L L  N
Sbjct: 166 VLFLSYN--QFKTIPVEFGQLKNLQELNLDANQLTTIPKEIGQLQNLQILYLRNN 218



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 69/116 (59%), Gaps = 2/116 (1%)

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
           ++++ L ++  K+ +LP+ +  L +L++LD   N L  LP+++  L NL+ L +  N+  
Sbjct: 47  LDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFL--NYNQ 104

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           L T P  I  L SL +L +S N++ TLP  IG L KLQKL L  N L + P ++ +
Sbjct: 105 LTTFPKEIEQLKSLHKLYLSENQLMTLPKEIGQLEKLQKLYLNANQLTTIPNEIAQ 160


>gi|359728069|ref|ZP_09266765.1| hypothetical protein Lwei2_14567 [Leptospira weilii str.
           2006001855]
          Length = 262

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/203 (37%), Positives = 109/203 (53%), Gaps = 22/203 (10%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK-L 69
           +NV VL++ +N+L+ LP  IG L  L+VL +  N L  LPK I       EL    N  L
Sbjct: 1   MNVSVLNLENNELRILPQEIGQLRNLEVLYLHNNQLRILPKEIGGQLESLELLDLSNNGL 60

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDAR----------------- 112
           R LP  IG +L NL+ L ++ N++  LP+ +  L +LR+LD                   
Sbjct: 61  RTLPQEIG-QLRNLEVLYLHNNQLRTLPKEIGQLRNLRILDLSDVIPGYYVAMGLSLKLD 119

Query: 113 -LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
             N L++LP+++  L+NLEVL +  N   L TLP  IG L +L  L +  N++ TLP  I
Sbjct: 120 SFNQLRTLPKEIGQLVNLEVLYLHNN--QLRTLPKEIGQLRNLKTLHLENNRLRTLPQEI 177

Query: 172 GCLRKLQKLSLEGNPLVSPPMDV 194
           G LR L+ L LE N L + P ++
Sbjct: 178 GQLRNLEVLVLENNELTTLPQEI 200



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/231 (36%), Positives = 129/231 (55%), Gaps = 26/231 (11%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGC-LSKLKVLDVSGNLLESLPKTIENCRSL 59
           ++P+ +  +L N+ VL +H+NQL+ LP  IG  L  L++LD+S N L +LP+ I   R+L
Sbjct: 15  ILPQEI-GQLRNLEVLYLHNNQLRILPKEIGGQLESLELLDLSNNGLRTLPQEIGQLRNL 73

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSI------------------NCNKIVILPQSLT 101
           E L  + N+LR LP  IG +L NL+ L +                  + N++  LP+ + 
Sbjct: 74  EVLYLHNNQLRTLPKEIG-QLRNLRILDLSDVIPGYYVAMGLSLKLDSFNQLRTLPKEIG 132

Query: 102 HLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSY 161
            L +L VL    N L++LP+++  L NL+ L++  N   L TLP  IG L +L  L +  
Sbjct: 133 QLVNLEVLYLHNNQLRTLPKEIGQLRNLKTLHLENN--RLRTLPQEIGQLRNLEVLVLEN 190

Query: 162 NKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGLSA--VKGYLSEK 209
           N++TTLP  IG LR L+ L L  N L + P ++ + Q L    + GYLS +
Sbjct: 191 NELTTLPQEIGQLRNLKTLHLLNNRLRTLPKEIRQLQNLRTLYLTGYLSNR 241


>gi|28972728|dbj|BAC65780.1| mKIAA1365 protein [Mus musculus]
          Length = 1497

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 108/184 (58%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP SIG L  L  LD+S N +E++   I  C +LE+
Sbjct: 206 LPEVLD-QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALED 264

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+QLPD+IG  L  L TL ++ N++ +LP ++ +L+ L   D   N L+SLP 
Sbjct: 265 LLLSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPP 323

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L + +NF  L  LP  IG   ++  + +  NK+  LP+ IG +++L+ L+
Sbjct: 324 TIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLN 381

Query: 182 LEGN 185
           L  N
Sbjct: 382 LSDN 385



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 108/233 (46%), Gaps = 50/233 (21%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  LK LD+S N ++  P+ I+ C+ L 
Sbjct: 66  EELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLT 125

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   L  LR+L+ R N LK+L
Sbjct: 126 IIEASVNPISKLPD--GFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTL 183

Query: 120 PEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELD 158
           P+ +  L  LE L++  N                        L+ LP SIG L  LV LD
Sbjct: 184 PKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD 243

Query: 159 VSYNKITT-----------------------LPDSIGCLRKLQKLSLEGNPLV 188
           +S N+I T                       LPDSIG L+KL  L ++ N L 
Sbjct: 244 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLT 296



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP+SIG L KL  L V  N L  LP TI N   LEE + + N+L  LP TIG+ 
Sbjct: 269 SNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGY- 327

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+TL+++ N +  LP+ +    ++ V+  R N L+ LPE++  +  L VLN+S N  
Sbjct: 328 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDN-- 385

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+ LP+S   L  L  L +S N+   L
Sbjct: 386 RLKNLPFSFTKLKELAALWLSDNQSKAL 413



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 69  LRQLP-DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P +   FE   L+ L ++ N+I  LP+ L +  +LR L    N L SLP  + +L+
Sbjct: 41  LQQVPKEVFNFERT-LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLV 99

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           NL+ L+IS+N   ++  P +I     L  ++ S N I+ LPD    L  L +L L
Sbjct: 100 NLKELDISKNG--VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYL 152



 Score = 40.4 bits (93), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 38/61 (62%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP  IG + +L+VL++S N L++LP +    + L  L  + N+ + 
Sbjct: 353 NVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKA 412

Query: 72  L 72
           L
Sbjct: 413 L 413


>gi|301627568|ref|XP_002942945.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Xenopus
           (Silurana) tropicalis]
          Length = 582

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 108/191 (56%), Gaps = 4/191 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+P S+   L  +  L ++ N+L+ LP  +GCL  L  L +S N L SLP +++N + L 
Sbjct: 114 MLPVSI-KDLTQITELYLYGNKLQSLPAEVGCLVNLVKLALSENSLTSLPDSLDNLKKLC 172

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+   NKLR++P  + + L +L TL +  N+I  + + +  L+ L +L  R N +K LP
Sbjct: 173 MLDLRHNKLREIPAVV-YRLSSLTTLFLRFNRITAVEKDIKTLSKLTMLSIRENKIKHLP 231

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L NL  L+++ N   LE LP  IG    +  LD+ +N++  LPD+IG L  L +L
Sbjct: 232 AEIGELCNLITLDVAHN--QLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLCSLSRL 289

Query: 181 SLEGNPLVSPP 191
            L  N L + P
Sbjct: 290 GLRYNRLSAVP 300



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 102/187 (54%), Gaps = 12/187 (6%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           + +L +  N++K LP  IG L  L  LDV+ N LE LPK I NC  +  L+   N+L  L
Sbjct: 217 LTMLSIRENKIKHLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDL 276

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED-LENLINLEV 131
           PDTIG  L +L  L +  N++  +P+SL   + L  L+   N + +LPE  L +L+ +  
Sbjct: 277 PDTIG-NLCSLSRLGLRYNRLSAVPRSLAKCSELDELNLENNNISTLPEGLLSSLVKVNS 335

Query: 132 LNISQN-FQYLETLPYSIG---LLMSLVELDVSYNKITTLPDSIGCLRK-LQKLSLEGNP 186
           L +++N FQ      Y +G      ++  L++ +N+I  +P  I    K L KL+++ N 
Sbjct: 336 LTLARNCFQS-----YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQ 390

Query: 187 LVSPPMD 193
           L S P+D
Sbjct: 391 LTSLPLD 397



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 106/230 (46%), Gaps = 50/230 (21%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+  N+L  LP++IG L  L  L +  N L ++P+++  C  L+ELN   N +  L
Sbjct: 263 ITNLDLQHNELLDLPDTIGNLCSLSRLGLRYNRLSAVPRSLAKCSELDELNLENNNISTL 322

Query: 73  PDTIGFELINLKTLSI--NC---------------------------------------- 90
           P+ +   L+ + +L++  NC                                        
Sbjct: 323 PEGLLSSLVKVNSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLS 382

Query: 91  ------NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
                 N++  LP      TS+  L+   N L  +PED+  L+++EVL +S N   L+ L
Sbjct: 383 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSIEVLILSNNL--LKKL 440

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           P+ IG L  L ELD+  NK+ +LP+ I  L+ LQKL L  N L + P  +
Sbjct: 441 PHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 2/160 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           ++V L++ +NQL  +P  +  L  ++VL +S NLL+ LP  I N R L EL+   NKL  
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSIEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLES 462

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ I + L +L+ L +  N++  LP+ + HLT+L  L    N L  LPE++  L NLE 
Sbjct: 463 LPNEIAY-LKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEE 521

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           L ++ N   L +LP+ + L   L  + +    ++ LP  I
Sbjct: 522 LYLNDN-PNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 560



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 97/177 (54%), Gaps = 8/177 (4%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSLEELNANFNKL 69
           +  L++  N++  +P   G  S+ KVL   ++  N L SLP       S+ ELN   N+L
Sbjct: 357 IYSLNMEHNRINKIP--FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ +   L++++ L ++ N +  LP  + +L  LR LD   N L+SLP ++  L +L
Sbjct: 415 TKIPEDVSG-LVSIEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDL 473

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           + L ++ N   L TLP  IG L +L  L +  N +T LP+ IG L  L++L L  NP
Sbjct: 474 QKLVLTNN--QLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNP 528



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 96/195 (49%), Gaps = 5/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLP-NSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSL 59
           +PE L + L+ V  L +  N  +  P       S +  L++  N +  +P  I    + L
Sbjct: 322 LPEGLLSSLVKVNSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL 381

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +LN   N+L  LP   G    ++  L++  N++  +P+ ++ L S+ VL    N LK L
Sbjct: 382 SKLNMKDNQLTSLPLDFG-TWTSMVELNLATNQLTKIPEDVSGLVSIEVLILSNNLLKKL 440

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P  + NL  L  L++ +N   LE+LP  I  L  L +L ++ N++TTLP  IG L  L  
Sbjct: 441 PHGIGNLRKLRELDLEEN--KLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTH 498

Query: 180 LSLEGNPLVSPPMDV 194
           L L  N L   P ++
Sbjct: 499 LGLGENLLTHLPEEI 513



 Score = 38.5 bits (88), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 30/53 (56%)

Query: 139 QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           + +  LP SI  L  + EL +  NK+ +LP  +GCL  L KL+L  N L S P
Sbjct: 110 KSIHMLPVSIKDLTQITELYLYGNKLQSLPAEVGCLVNLVKLALSENSLTSLP 162


>gi|432931615|ref|XP_004081701.1| PREDICTED: leucine-rich repeat and calponin homology
           domain-containing protein 1-like [Oryzias latipes]
          Length = 668

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/214 (35%), Positives = 111/214 (51%), Gaps = 30/214 (14%)

Query: 5   SLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCR-SLEELN 63
           S    L+ +  L+++ N ++ +P+SI  L  L  L++S N L SLP  +  C   L  LN
Sbjct: 87  SEVCHLVALETLNLYHNCIRTIPDSIISLQSLTSLNLSRNQLSSLPACL--CGLPLRVLN 144

Query: 64  ANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDL 123
           A+ NKL  LP+TIG +L +L  L I+CN+I  LP+ +  L +LR L+ R N L  LPEDL
Sbjct: 145 ASNNKLVSLPETIG-QLQSLMELDISCNEITALPRHIGRLKALRELNVRRNLLCVLPEDL 203

Query: 124 ENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLE 183
            +L                           LV+ DVS NK++T+P     +++LQ L LE
Sbjct: 204 ADL--------------------------PLVKFDVSCNKVSTIPVCYRNMKQLQSLQLE 237

Query: 184 GNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSP 217
            NPL SPP  +  +G   +  YLS +     K P
Sbjct: 238 NNPLQSPPAQICIKGKVHIFKYLSIEACRSEKMP 271


>gi|45658593|ref|YP_002679.1| hypothetical protein [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|418694153|ref|ZP_13255197.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|418713547|ref|ZP_13274273.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|421085480|ref|ZP_15546333.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421103545|ref|ZP_15564142.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45601837|gb|AAS71316.1| cytoplasmic membrane protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|409958164|gb|EKO17061.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|410366508|gb|EKP21899.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410432116|gb|EKP76474.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|410790022|gb|EKR83717.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|456986299|gb|EMG21899.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 423

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 107/198 (54%), Gaps = 27/198 (13%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNAN---------- 65
           LD+ SN+LK +P  I  L  LKVL ++GN L SLPK IE  ++L+ LN            
Sbjct: 207 LDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVE 266

Query: 66  -------------FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDAR 112
                        +N+L + P  +G +L +LK LS+  N+I  LP  +T L  L+ L   
Sbjct: 267 ILELKNLLELNLYYNQLVEFPKEVG-QLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLS 325

Query: 113 LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
            N +  LP+++  L NLE L++S N   L  LP  IG L  L  L++  N++TTLP  I 
Sbjct: 326 GNKITILPKEILQLKNLEWLSLSNN--KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIE 383

Query: 173 CLRKLQKLSLEGNPLVSP 190
            L+ LQ+L L+ NP +SP
Sbjct: 384 QLKNLQRLELDSNP-ISP 400



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 104/183 (56%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V  LD+    LK LPN IG L  L+ LD+ GN    L K I   + L++LN N NKL  
Sbjct: 42  DVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTV 101

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ LS++ N++V LP+ +    +L+ L+   N L  LP+++  L NL+ 
Sbjct: 102 LPKEIG-QLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQE 160

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L++  N   L +LP  I  L SL  LD+++N+ TT+   +  L  L+ L L  N L + P
Sbjct: 161 LSLLSN--KLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIP 218

Query: 192 MDV 194
            ++
Sbjct: 219 KEI 221



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 107/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  N+   L   I  L  L+ L+++ N L  LPK I   ++L+EL+ + N
Sbjct: 61  GQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSN 120

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +  NL+ L+++ NK+ +LP+ +  L +L+ L    N L SLP ++E L 
Sbjct: 121 ELVNLPKEIG-QFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLK 179

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L+++ N     T+   + LL +L  LD+  NK+ T+P  I  L+ L+ L L GN L
Sbjct: 180 SLKNLDLNHN--EFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQL 237

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 238 TSLPKEI 244



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 105/179 (58%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L++++N+L  LP  IG L  L+ L +  N L +LPK I   ++L++LN + NKL  LP  
Sbjct: 92  LNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKE 151

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL+ LS+  NK++ LP  +  L SL+ LD   N   ++ +++  L  LE L++ 
Sbjct: 152 IG-QLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLR 210

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L+T+P  I  L SL  L ++ N++T+LP  I  L+ L+ L+L  N     P+++
Sbjct: 211 SN--KLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEI 267



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 1/103 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++  L ++ NQ+  LP  +  L  L+ L +SGN +  LPK I   ++LE L+ + N
Sbjct: 291 GQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNN 350

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD 110
           KL  LP  IG +L  L+ L +  N++  LP+ +  L +L+ L+
Sbjct: 351 KLNALPKEIG-QLKKLQRLELGNNQLTTLPKEIEQLKNLQRLE 392



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R LD     LK+LP  +  L NL+ L++  N   +  L   I  L  L 
Sbjct: 33  LAKALQNPADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTI--LSKEIWQLKDLQ 90

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +L+++ NK+T LP  IG L+ LQ+LSL  N LV+ P ++
Sbjct: 91  KLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEI 129


>gi|403257782|ref|XP_003921473.1| PREDICTED: leucine-rich repeat-containing protein 40 [Saimiri
           boliviensis boliviensis]
          Length = 615

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 119/221 (53%), Gaps = 30/221 (13%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P S ++ L ++V L++ SNQLK LP  I  + +LK LD + NLLE++P  +    SLE 
Sbjct: 202 VPASFSS-LSSLVRLNLSSNQLKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLEL 260

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVIL-PQSLTHLTSLRVLDARLNCLKSLP 120
           L    NKLR LP+     L  LK L +  N+I +L  + L HL S+ VLD R N LKS+P
Sbjct: 261 LYLRRNKLRFLPEFPSCSL--LKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVP 318

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           ++                         I LL SL  LD+S N I++LP S+G L  L+ L
Sbjct: 319 DE-------------------------IILLHSLERLDLSNNDISSLPYSLGNLH-LKFL 352

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKS 221
           +LEGNPL +   +++ +G   V  YL  K+ +D  S +  +
Sbjct: 353 ALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQRDSA 393



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/162 (37%), Positives = 96/162 (59%), Gaps = 5/162 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           + VLD+H NQL  LP++I  L+ L+ L++S N L+ LP+ I N R+L+ L    N+L  +
Sbjct: 120 LTVLDIHDNQLTSLPSAIRELANLQKLNISHNKLKILPEEITNLRNLKCLYLQHNELICI 179

Query: 73  PDTIGFE-LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
            +  GFE L NL+ L ++ N++  +P S + L+SL  L+   N LKSLP ++  +  L+ 
Sbjct: 180 SE--GFEQLSNLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNQLKSLPAEINRMKRLKH 237

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGC 173
           L+ + N   LET+P  +  + SL  L +  NK+  LP+   C
Sbjct: 238 LDCNSNL--LETIPPELAGMESLELLYLRRNKLRFLPEFPSC 277



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 3/170 (1%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           + +N+L+ L + +  L  L VLD+  N L SLP  I    +L++LN + NKL+ LP+ I 
Sbjct: 102 ISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELANLQKLNISHNKLKILPEEIT 161

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
             L NLK L +  N+++ + +    L++L  LD   N L ++P    +L +L  LN+S N
Sbjct: 162 -NLRNLKCLYLQHNELICISEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSN 220

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
              L++LP  I  +  L  LD + N + T+P  +  +  L+ L L  N L
Sbjct: 221 --QLKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKL 268



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 91/158 (57%), Gaps = 3/158 (1%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           + L  L +S N L+SL   +    +L  L+ + N+L  LP  I  EL NL+ L+I+ NK+
Sbjct: 95  TDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIR-ELANLQKLNISHNKL 153

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
            ILP+ +T+L +L+ L  + N L  + E  E L NLE L++S N   L T+P S   L S
Sbjct: 154 KILPEEITNLRNLKCLYLQHNELICISEGFEQLSNLEDLDLSNN--RLTTVPASFSSLSS 211

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LV L++S N++ +LP  I  +++L+ L    N L + P
Sbjct: 212 LVRLNLSSNQLKSLPAEINRMKRLKHLDCNSNLLETIP 249



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 102/208 (49%), Gaps = 12/208 (5%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSL-EELNAN 65
           ++ + +LD    Q   +P+ +    K  ++   + S N L  +PK +   + +  ++N +
Sbjct: 411 IITLKMLDYSDKQATLIPDEVFDAVKSNIITSVNFSKNQLCEIPKRMVELKEMVSDVNLS 470

Query: 66  FNKLRQLPDTIGFELINLKTLS---INCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED 122
           FNKL     +I  EL  L+ L+   +  N +  LP+ +  L  L+ ++   N  K LPE 
Sbjct: 471 FNKL----SSISLELCMLQKLTFLDLRNNFLNSLPEEMELLVRLQTINLSFNRFKMLPEV 526

Query: 123 LENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           L  +  LE + IS N Q     P  + ++ +L  LD+  N +  +P  +G    L+ L L
Sbjct: 527 LYRIFTLETILISNN-QVGSMDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLL 585

Query: 183 EGNPLVSPPMDVVEQGLSAVKGYLSEKM 210
           +GNP   P   ++ +G +A+  YL +++
Sbjct: 586 DGNPFRVPRAAILMKGTAAILEYLRDRI 613



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 84/181 (46%), Gaps = 30/181 (16%)

Query: 39  LDVSGNLLESLPKTIE--NCRSLEELNAN--FNKLRQLPDTIGFELINLKTLSINCNKIV 94
           L++SG  L  +P+ +   N    EE N N  F    +      +E  +L  L I+ NK+ 
Sbjct: 54  LNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATER-----WWEQTDLTKLIISNNKLQ 108

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN----------------- 137
            L   L  L +L VLD   N L SLP  +  L NL+ LNIS N                 
Sbjct: 109 SLTDDLRLLPALTVLDIHDNQLTSLPSAIRELANLQKLNISHNKLKILPEEITNLRNLKC 168

Query: 138 --FQYLETLPYSIGL--LMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMD 193
              Q+ E +  S G   L +L +LD+S N++TT+P S   L  L +L+L  N L S P +
Sbjct: 169 LYLQHNELICISEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNQLKSLPAE 228

Query: 194 V 194
           +
Sbjct: 229 I 229


>gi|417766182|ref|ZP_12414136.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400351636|gb|EJP03855.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 423

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 107/198 (54%), Gaps = 27/198 (13%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNAN---------- 65
           LD+ SN+LK +P  I  L  LKVL ++GN L SLPK IE  ++L+ LN            
Sbjct: 207 LDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVE 266

Query: 66  -------------FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDAR 112
                        +N+L + P  +G +L +LK LS+  N+I  LP  +T L  L+ L   
Sbjct: 267 ILELKNLLELNLYYNQLVEFPKEVG-QLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLS 325

Query: 113 LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
            N +  LP+++  L NLE L++S N   L  LP  IG L  L  L++  N++TTLP  I 
Sbjct: 326 GNKITILPKEILQLKNLEWLSLSNN--KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIE 383

Query: 173 CLRKLQKLSLEGNPLVSP 190
            L+ LQ+L L+ NP +SP
Sbjct: 384 QLKNLQRLELDSNP-ISP 400



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 105/183 (57%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V  LD+    LK LPN IG L  L+ LD+ GN    L K I   + L++LN N NKL  
Sbjct: 42  DVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTV 101

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ LS++ N++V LP+ +    +L+ L+   N L  LP+++  L NL+ 
Sbjct: 102 LPKEIG-QLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQE 160

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L++  N   L +LP  I  L SL  LD+++N++TT+   +  L  L+ L L  N L + P
Sbjct: 161 LSLLSN--KLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLRSNKLKTIP 218

Query: 192 MDV 194
            ++
Sbjct: 219 KEI 221



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  N+   L   I  L  L+ L+++ N L  LPK I   ++L+EL+ + N
Sbjct: 61  GQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSN 120

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +  NL+ L+++ NK+ +LP+ +  L +L+ L    N L SLP ++E L 
Sbjct: 121 ELVNLPKEIG-QFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLK 179

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L+++ N   L T+   + LL +L  LD+  NK+ T+P  I  L+ L+ L L GN L
Sbjct: 180 SLKNLDLNHN--ELTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQL 237

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 238 TSLPKEI 244



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 106/179 (59%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L++++N+L  LP  IG L  L+ L +  N L +LPK I   ++L++LN + NKL  LP  
Sbjct: 92  LNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKE 151

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL+ LS+  NK++ LP  +  L SL+ LD   N L ++ +++  L  LE L++ 
Sbjct: 152 IG-QLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLR 210

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L+T+P  I  L SL  L ++ N++T+LP  I  L+ L+ L+L  N     P+++
Sbjct: 211 SN--KLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEI 267



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 1/103 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++  L ++ NQ+  LP  +  L  L+ L +SGN +  LPK I   ++LE L+ + N
Sbjct: 291 GQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNN 350

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD 110
           KL  LP  IG +L  L+ L +  N++  LP+ +  L +L+ L+
Sbjct: 351 KLNALPKEIG-QLKKLQRLELGNNQLTTLPKEIEQLKNLQRLE 392



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R LD     LK+LP  +  L NL+ L++  N   +  L   I  L  L 
Sbjct: 33  LAKALQNPADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTI--LSKEIWQLKDLQ 90

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +L+++ NK+T LP  IG L+ LQ+LSL  N LV+ P ++
Sbjct: 91  KLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEI 129


>gi|50400980|sp|Q80TE7.2|LRRC7_MOUSE RecName: Full=Leucine-rich repeat-containing protein 7; AltName:
           Full=Densin-180; Short=Densin; AltName: Full=Protein
           LAP1
          Length = 1490

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 108/184 (58%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP SIG L  L  LD+S N +E++   I  C +LE+
Sbjct: 199 LPEVLD-QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALED 257

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+QLPD+IG  L  L TL ++ N++ +LP ++ +L+ L   D   N L+SLP 
Sbjct: 258 LLLSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPP 316

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L + +NF  L  LP  IG   ++  + +  NK+  LP+ IG +++L+ L+
Sbjct: 317 TIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLN 374

Query: 182 LEGN 185
           L  N
Sbjct: 375 LSDN 378



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 108/233 (46%), Gaps = 50/233 (21%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  LK LD+S N ++  P+ I+ C+ L 
Sbjct: 59  EELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   L  LR+L+ R N LK+L
Sbjct: 119 IIEASVNPISKLPD--GFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTL 176

Query: 120 PEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELD 158
           P+ +  L  LE L++  N                        L+ LP SIG L  LV LD
Sbjct: 177 PKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD 236

Query: 159 VSYNKITT-----------------------LPDSIGCLRKLQKLSLEGNPLV 188
           +S N+I T                       LPDSIG L+KL  L ++ N L 
Sbjct: 237 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLT 289



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP+SIG L KL  L V  N L  LP TI N   LEE + + N+L  LP TIG+ 
Sbjct: 262 SNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGY- 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+TL+++ N +  LP+ +    ++ V+  R N L+ LPE++  +  L VLN+S N  
Sbjct: 321 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+ LP+S   L  L  L +S N+   L
Sbjct: 379 RLKNLPFSFTKLKELAALWLSDNQSKAL 406



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 69  LRQLP-DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P +   FE   L+ L ++ N+I  LP+ L +  +LR L    N L SLP  + +L+
Sbjct: 34  LQQVPKEVFNFERT-LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLV 92

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           NL+ L+IS+N   ++  P +I     L  ++ S N I+ LPD    L  L +L L
Sbjct: 93  NLKELDISKNG--VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYL 145



 Score = 40.4 bits (93), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 38/61 (62%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP  IG + +L+VL++S N L++LP +    + L  L  + N+ + 
Sbjct: 346 NVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKA 405

Query: 72  L 72
           L
Sbjct: 406 L 406


>gi|268556666|ref|XP_002636322.1| C. briggsae CBR-LET-413 protein [Caenorhabditis briggsae]
          Length = 681

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 106/177 (59%), Gaps = 3/177 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           VLDV  N++  LP  IG L++L  L+++ N +  +P+T++NC+ L  L  N N   +LP+
Sbjct: 62  VLDVSDNEISMLPAEIGQLTQLIELNLNRNEITDIPETLKNCKMLANLKLNGNPFTRLPE 121

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
           +I  E  ++  LS+N   +  LP ++  L +LRVL+AR N L+++P  + +L  LE L++
Sbjct: 122 SIS-ECTSITILSLNETNLTALPSAMGSLANLRVLEARENHLRTIPSSIVDLKLLEELDL 180

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            QN   +E LP  +G L SL E  V  N +T+LPDSI   R L +L +  N ++  P
Sbjct: 181 GQN--EIEDLPAKLGKLSSLREFYVDMNSLTSLPDSISDCRMLDQLDVSENHIIRLP 235



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/185 (35%), Positives = 99/185 (53%), Gaps = 6/185 (3%)

Query: 2   IPESLT-ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +P+S++  R+L+   LDV  N +  LP   G +S L  L++S N +  LP++  N + L+
Sbjct: 211 LPDSISDCRMLDQ--LDVSENHIIRLPEKFGNMSGLTDLNISINEIIELPRSFGNLKRLQ 268

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L A  N L QL   IG +   L  + +  N +  LP S+  L +L  L+   N L  +P
Sbjct: 269 MLKAERNSLTQLTPEIG-QCQALTEMYLGQNFLTDLPDSIGDLRNLTTLNVDCNNLSEIP 327

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E + +   L VL++ QN   L  LP +IG   ++  LDV+ NK+T LP ++  L KLQ L
Sbjct: 328 ETIGDCKALTVLSLRQNI--LTELPMTIGKCENMTVLDVASNKLTNLPFTVKVLYKLQAL 385

Query: 181 SLEGN 185
            L  N
Sbjct: 386 WLSEN 390



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 96/187 (51%), Gaps = 3/187 (1%)

Query: 5   SLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNA 64
           S    L N+ VL+   N L+ +P+SI  L  L+ LD+  N +E LP  +    SL E   
Sbjct: 144 SAMGSLANLRVLEARENHLRTIPSSIVDLKLLEELDLGQNEIEDLPAKLGKLSSLREFYV 203

Query: 65  NFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLE 124
           + N L  LPD+I  +   L  L ++ N I+ LP+   +++ L  L+  +N +  LP    
Sbjct: 204 DMNSLTSLPDSIS-DCRMLDQLDVSENHIIRLPEKFGNMSGLTDLNISINEIIELPRSFG 262

Query: 125 NLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEG 184
           NL  L++L   +N   L  L   IG   +L E+ +  N +T LPDSIG LR L  L+++ 
Sbjct: 263 NLKRLQMLKAERN--SLTQLTPEIGQCQALTEMYLGQNFLTDLPDSIGDLRNLTTLNVDC 320

Query: 185 NPLVSPP 191
           N L   P
Sbjct: 321 NNLSEIP 327



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 27/211 (12%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+P  +  +L  ++ L+++ N++  +P ++     L  L ++GN    LP++I  C S+ 
Sbjct: 72  MLPAEI-GQLTQLIELNLNRNEITDIPETLKNCKMLANLKLNGNPFTRLPESISECTSIT 130

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSI-----------------------NCNKIVILP 97
            L+ N   L  LP  +G  L NL+ L                           N+I  LP
Sbjct: 131 ILSLNETNLTALPSAMG-SLANLRVLEARENHLRTIPSSIVDLKLLEELDLGQNEIEDLP 189

Query: 98  QSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVEL 157
             L  L+SLR     +N L SLP+ + +   L+ L++S+N  ++  LP   G +  L +L
Sbjct: 190 AKLGKLSSLREFYVDMNSLTSLPDSISDCRMLDQLDVSEN--HIIRLPEKFGNMSGLTDL 247

Query: 158 DVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           ++S N+I  LP S G L++LQ L  E N L 
Sbjct: 248 NISINEIIELPRSFGNLKRLQMLKAERNSLT 278



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 97/197 (49%), Gaps = 26/197 (13%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+++ LP  +G LS L+   V  N L SLP +I +CR L++L+ + N + +LP+  G  +
Sbjct: 183 NEIEDLPAKLGKLSSLREFYVDMNSLTSLPDSISDCRMLDQLDVSENHIIRLPEKFG-NM 241

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK----------------------- 117
             L  L+I+ N+I+ LP+S  +L  L++L A  N L                        
Sbjct: 242 SGLTDLNISINEIIELPRSFGNLKRLQMLKAERNSLTQLTPEIGQCQALTEMYLGQNFLT 301

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
            LP+ + +L NL  LN+  N   L  +P +IG   +L  L +  N +T LP +IG    +
Sbjct: 302 DLPDSIGDLRNLTTLNVDCN--NLSEIPETIGDCKALTVLSLRQNILTELPMTIGKCENM 359

Query: 178 QKLSLEGNPLVSPPMDV 194
             L +  N L + P  V
Sbjct: 360 TVLDVASNKLTNLPFTV 376



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 86/171 (50%), Gaps = 6/171 (3%)

Query: 25  CLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLK 84
           CLP  +GC  ++  LD S + L+S+P  I   R LE+LN + N ++ L     F L  LK
Sbjct: 6   CLP--MGCQRQVDSLDRSQSNLQSIPSDIYRFRKLEDLNLSMNNIKDLGRL--FTLRRLK 61

Query: 85  TLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
            L ++ N+I +LP  +  LT L  L+   N +  +PE L+N   L   N+  N      L
Sbjct: 62  VLDVSDNEISMLPAEIGQLTQLIELNLNRNEITDIPETLKNCKMLA--NLKLNGNPFTRL 119

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
           P SI    S+  L ++   +T LP ++G L  L+ L    N L + P  +V
Sbjct: 120 PESISECTSITILSLNETNLTALPSAMGSLANLRVLEARENHLRTIPSSIV 170



 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 6/106 (5%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+S+   L N+  L+V  N L  +P +IG    L VL +  N+L  LP TI  C ++  
Sbjct: 303 LPDSI-GDLRNLTTLNVDCNNLSEIPETIGDCKALTVLSLRQNILTELPMTIGKCENMTV 361

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
           L+   NKL  LP T+   L  L+ L ++ N+     QS+  LT  R
Sbjct: 362 LDVASNKLTNLPFTVKV-LYKLQALWLSENQT----QSILKLTEGR 402


>gi|417406386|gb|JAA49853.1| Putative cytoskeletal regulator flightless-i [Desmodus rotundus]
          Length = 1369

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 105/183 (57%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LD S N +E + + I  C +L++L  + N L+QLP+TIG  L
Sbjct: 217 NRLTFIPGFIGSLKQLTYLDFSKNNIEMVEEGISACENLQDLILSSNSLQQLPETIG-SL 275

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  Y
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNIRTFAADHN--Y 333

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q L
Sbjct: 334 LQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQL 393

Query: 200 SAV 202
           +A+
Sbjct: 394 TAM 396



 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 110/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLNGLKEFWMDGNRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L    N +     ++VE+G+SA
Sbjct: 235 LDFSKNNI-----EMVEEGISA 251



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 100/186 (53%), Gaps = 5/186 (2%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQ 197
            +V+EQ
Sbjct: 201 -EVLEQ 205



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLNGLKEFWMDGNRLTFIPGFIGSLKQLTYLDFSKNNIEMVEEGISACE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLILSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLVSIEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  ++  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNIRTFAADHNYLQQLPPEI 341



 Score = 81.6 bits (200), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 94/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+ E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 244 MVEEGISA-CENLQDLILSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP +IG +L N++T + + N +  LP  +    ++ VL    N L++LP
Sbjct: 303 ELDCSFNEVEALPSSIG-QLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402


>gi|384872582|sp|P70587.2|LRRC7_RAT RecName: Full=Leucine-rich repeat-containing protein 7; AltName:
           Full=Densin-180; Short=Densin; AltName: Full=Protein
           LAP1
          Length = 1490

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 108/184 (58%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP SIG L  L  LD+S N +E++   I  C +LE+
Sbjct: 199 LPEVLD-QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALED 257

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+QLPD+IG  L  L TL ++ N++ +LP ++ +L+ L   D   N L+SLP 
Sbjct: 258 LLLSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPP 316

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L + +NF  L  LP  IG   ++  + +  NK+  LP+ IG +++L+ L+
Sbjct: 317 TIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLN 374

Query: 182 LEGN 185
           L  N
Sbjct: 375 LSDN 378



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 108/233 (46%), Gaps = 50/233 (21%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  LK LD+S N ++  P+ I+ C+ L 
Sbjct: 59  EELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   L  LR+L+ R N LK+L
Sbjct: 119 IIEASVNPISKLPD--GFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTL 176

Query: 120 PEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELD 158
           P+ +  L  LE L++  N                        L+ LP SIG L  LV LD
Sbjct: 177 PKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD 236

Query: 159 VSYNKITT-----------------------LPDSIGCLRKLQKLSLEGNPLV 188
           +S N+I T                       LPDSIG L+KL  L ++ N L 
Sbjct: 237 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLT 289



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP+SIG L KL  L V  N L  LP TI N   LEE + + N+L  LP TIG+ 
Sbjct: 262 SNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGY- 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+TL+++ N +  LP+ +    ++ V+  R N L+ LPE++  +  L VLN+S N  
Sbjct: 321 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+ LP+S   L  L  L +S N+   L
Sbjct: 379 RLKNLPFSFTKLKELAALWLSDNQSKAL 406



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 69  LRQLP-DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P +   FE   L+ L ++ N+I  LP+ L +  +LR L    N L SLP  + +L+
Sbjct: 34  LQQVPKEVFNFERT-LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLV 92

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           NL+ L+IS+N   ++  P +I     L  ++ S N I+ LPD    L  L +L L
Sbjct: 93  NLKELDISKNG--VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYL 145



 Score = 40.4 bits (93), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 38/61 (62%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP  IG + +L+VL++S N L++LP +    + L  L  + N+ + 
Sbjct: 346 NVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKA 405

Query: 72  L 72
           L
Sbjct: 406 L 406


>gi|148686562|gb|EDL18509.1| Erbb2 interacting protein [Mus musculus]
 gi|219519902|gb|AAI45510.1| Erbb2ip protein [Mus musculus]
          Length = 1402

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 105/183 (57%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LDVS N +E + + I  C +L++   + N L+QLP+TIG  L
Sbjct: 217 NRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIG-SL 275

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  Y
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHN--Y 333

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q L
Sbjct: 334 LQQLPPEIGNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQL 393

Query: 200 SAV 202
           +A+
Sbjct: 394 TAM 396



 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 111/204 (54%), Gaps = 13/204 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 IVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG LR+L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSAVK 203
           L +  N +     ++VE+G+S  +
Sbjct: 235 LDVSKNNI-----EMVEEGISTCE 253



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 86/144 (59%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP +IG L  +  L +  N L  LP +I   RS+EEL+ +FN++  LP +IG +
Sbjct: 262 SNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIG-Q 320

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N++T + + N +  LP  + +  ++ VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 321 LTNMRTFAADHNYLQQLPPEIGNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDN-- 378

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            L+ LP+S   L  L  + +S N+
Sbjct: 379 RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L +++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS ++ +
Sbjct: 201 -EVLEQ-LSGLREF 212



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  L+   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L S+ ELD S+N+I
Sbjct: 254 NLQDFLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLRSIEELDCSFNEI 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  ++  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNMRTFAADHNYLQQLPPEI 341



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 77/137 (56%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PE++ + L NV  L +  NQL  LP+SIG L  ++ LD S N +E+LP +I    ++ 
Sbjct: 267 QLPETIGS-LKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMR 325

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
              A+ N L+QLP  IG    N+  L ++CNK+  LP+ +  +  L+V++   N LK+LP
Sbjct: 326 TFAADHNYLQQLPPEIG-NWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384

Query: 121 EDLENLINLEVLNISQN 137
                L  L  + +S N
Sbjct: 385 FSFTKLQQLTAMWLSDN 401


>gi|421118977|ref|ZP_15579304.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348317|gb|EKO99143.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 333

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 112/207 (54%), Gaps = 22/207 (10%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VLD+   +LK LP  IG L  L+ L++  N L ++ K IE  ++L+ L+   N++ 
Sbjct: 48  LDVRVLDLSEQKLKALPKKIGQLKNLQELNLDANQLTTILKEIEQLKNLQVLDFGSNQIT 107

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            L   IG +L NLK L +N N++  LP+ +  L +L+ L+   N L +LP+++  L NL+
Sbjct: 108 TLSQEIG-QLQNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQ 166

Query: 131 VLNISQN--------------FQYLE-------TLPYSIGLLMSLVELDVSYNKITTLPD 169
            L +S+N               Q L        TLP  I  L +L EL +S N++ TLP 
Sbjct: 167 ELYLSENQLMTLPKEIGQLEKLQELNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPK 226

Query: 170 SIGCLRKLQKLSLEGNPLVSPPMDVVE 196
            IG L KLQKL L  N L + P ++ +
Sbjct: 227 EIGQLEKLQKLYLNANQLTTIPNEIAQ 253



 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 88/241 (36%), Positives = 132/241 (54%), Gaps = 13/241 (5%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ VLD  SNQ+  L   IG L  LKVL ++ N L +LPK I   ++L+ LN   N+
Sbjct: 92  QLKNLQVLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQ 151

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  I  +L NL+ L ++ N+++ LP+ +  L  L+ L+   N L +LP+++  L N
Sbjct: 152 LITLPKEIA-QLKNLQELYLSENQLMTLPKEIGQLEKLQELNLWNNQLITLPKEIAQLKN 210

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S+N   L TLP  IG L  L +L ++ N++TT+P+ I  L+ LQ L L  N   
Sbjct: 211 LQELYLSEN--QLMTLPKEIGQLEKLQKLYLNANQLTTIPNEIAQLQNLQVLFLSYNQFK 268

Query: 189 SPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGALRNHRS--EERER 246
           + P   VE G       L+   N     PK+   +G+L    T    LRN++   EE+ER
Sbjct: 269 TIP---VEFGQLKNLQELNLDANQLTTIPKE---IGQLQNLQTL--YLRNNQFSIEEKER 320

Query: 247 F 247
            
Sbjct: 321 I 321



 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+ VL +++NQL  LP  IG L  L+ L++  N L +LPK I   ++L+EL  + N
Sbjct: 114 GQLQNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSEN 173

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +L  L+ L++  N+++ LP+ +  L +L+ L    N L +LP+++  L 
Sbjct: 174 QLMTLPKEIG-QLEKLQELNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLE 232

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L ++ N   L T+P  I  L +L  L +SYN+  T+P   G L+ LQ+L+L+ N L
Sbjct: 233 KLQKLYLNAN--QLTTIPNEIAQLQNLQVLFLSYNQFKTIPVEFGQLKNLQELNLDANQL 290

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 291 TTIPKEI 297



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 102/178 (57%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++ +NQL  LP  I  L  L+ L +S N L +LPK I     L+ELN   N
Sbjct: 137 GQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQELNLWNN 196

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L ++ N+++ LP+ +  L  L+ L    N L ++P ++  L 
Sbjct: 197 QLITLPKEIA-QLKNLQELYLSENQLMTLPKEIGQLEKLQKLYLNANQLTTIPNEIAQLQ 255

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+VL +S N    +T+P   G L +L EL++  N++TT+P  IG L+ LQ L L  N
Sbjct: 256 NLQVLFLSYN--QFKTIPVEFGQLKNLQELNLDANQLTTIPKEIGQLQNLQTLYLRNN 311



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 112/194 (57%), Gaps = 8/194 (4%)

Query: 36  LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           ++VLD+S   L++LPK I   ++L+ELN + N+L  +   I  +L NL+ L    N+I  
Sbjct: 50  VRVLDLSEQKLKALPKKIGQLKNLQELNLDANQLTTILKEIE-QLKNLQVLDFGSNQITT 108

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L Q +  L +L+VL    N L +LP+++  L NL+ LN+  N   L TLP  I  L +L 
Sbjct: 109 LSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNN--QLITLPKEIAQLKNLQ 166

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGLSAVKGYLSEKMNNDH 214
           EL +S N++ TLP  IG L KLQ+L+L  N L++ P ++ + + L  +  YLSE  N   
Sbjct: 167 ELYLSENQLMTLPKEIGQLEKLQELNLWNNQLITLPKEIAQLKNLQEL--YLSE--NQLM 222

Query: 215 KSPKKKSWVGKLVK 228
             PK+   + KL K
Sbjct: 223 TLPKEIGQLEKLQK 236


>gi|418680750|ref|ZP_13241991.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|421115503|ref|ZP_15575909.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|400327539|gb|EJO79787.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|410012987|gb|EKO71072.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|455667923|gb|EMF33190.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 288

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 113/190 (59%), Gaps = 3/190 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+ VL ++ N+L+ +P  IG L KLK L +  N L++LPK I N ++L+EL  + N
Sbjct: 93  GNLKNLQVLSLNGNKLETIPKEIGNLKKLKELSIEWNKLQTLPKEIGNLKNLKELYLSRN 152

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG  L  L+ + ++ N++  LPQ + +L SL  +    N   +LP+++ NL 
Sbjct: 153 QLKILPQEIG-NLRKLQRMHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLK 211

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L + +N Q +  LP  IG L +L EL +  N++T LP  I  L++L +LSL+GN  
Sbjct: 212 NLRNLVLGRN-QLISLLP-EIGNLKNLKELYLEENQLTMLPKQIAALKQLARLSLKGNQF 269

Query: 188 VSPPMDVVEQ 197
            S   + +++
Sbjct: 270 PSEEKERIQR 279



 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 109/188 (57%), Gaps = 3/188 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L + +N++  LP  IG L  L+VL ++GN LE++PK I N + L+EL+  +N
Sbjct: 70  GNLQNLKKLYLSANEITTLPPEIGNLKNLQVLSLNGNKLETIPKEIGNLKKLKELSIEWN 129

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL+ LP  IG  L NLK L ++ N++ ILPQ + +L  L+ +    N L  LP++++NL 
Sbjct: 130 KLQTLPKEIG-NLKNLKELYLSRNQLKILPQEIGNLRKLQRMHLSTNELTKLPQEIKNLE 188

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  + +  N     TLP  IG L +L  L +  N++ +L   IG L+ L++L LE N L
Sbjct: 189 SLLEIYLYDN--QFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELYLEENQL 246

Query: 188 VSPPMDVV 195
              P  + 
Sbjct: 247 TMLPKQIA 254



 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 74/181 (40%), Positives = 106/181 (58%), Gaps = 6/181 (3%)

Query: 12  NVVVLDVHSNQ---LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +V+VL+   N+   LK LP  IG L  LK L +S N + +LP  I N ++L+ L+ N NK
Sbjct: 48  DVLVLNYRDNEENPLKTLPKEIGNLQNLKKLYLSANEITTLPPEIGNLKNLQVLSLNGNK 107

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  +P  IG  L  LK LSI  NK+  LP+ + +L +L+ L    N LK LP+++ NL  
Sbjct: 108 LETIPKEIG-NLKKLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRK 166

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ +++S N   L  LP  I  L SL+E+ +  N+ TTLP  IG L+ L+ L L  N L+
Sbjct: 167 LQRMHLSTN--ELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLI 224

Query: 189 S 189
           S
Sbjct: 225 S 225



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 2/85 (2%)

Query: 110 DARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPD 169
           D   N LK+LP+++ NL NL+ L +S N   + TLP  IG L +L  L ++ NK+ T+P 
Sbjct: 56  DNEENPLKTLPKEIGNLQNLKKLYLSAN--EITTLPPEIGNLKNLQVLSLNGNKLETIPK 113

Query: 170 SIGCLRKLQKLSLEGNPLVSPPMDV 194
            IG L+KL++LS+E N L + P ++
Sbjct: 114 EIGNLKKLKELSIEWNKLQTLPKEI 138



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 1/78 (1%)

Query: 118 SLPEDLENLINLEVLNISQNFQY-LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
            L E  +N  ++ VLN   N +  L+TLP  IG L +L +L +S N+ITTLP  IG L+ 
Sbjct: 38  DLEEAFKNPKDVLVLNYRDNEENPLKTLPKEIGNLQNLKKLYLSANEITTLPPEIGNLKN 97

Query: 177 LQKLSLEGNPLVSPPMDV 194
           LQ LSL GN L + P ++
Sbjct: 98  LQVLSLNGNKLETIPKEI 115


>gi|348529816|ref|XP_003452408.1| PREDICTED: leucine-rich repeat-containing protein 7 [Oreochromis
           niloticus]
          Length = 1645

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 105/184 (57%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ +P SIG L +L+ LD++ N +E+L   I  C +LE+
Sbjct: 212 VPEVL-EQIHNLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIETLDADISGCEALED 270

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+ LPD+IG  L  L TL ++ N++  LP ++  L+ L  LD   N L+SLP 
Sbjct: 271 LLLSSNMLQHLPDSIGM-LKKLTTLKVDDNQLTSLPNTIGSLSLLEELDCSCNELESLPP 329

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L      +NF  L  LP  IG   ++  + +  NK+  LPD IG + KL+ L+
Sbjct: 330 TIGYLHSLRTFAADENF--LSELPREIGNCKNVTVMSLRSNKLEFLPDEIGQMTKLRVLN 387

Query: 182 LEGN 185
           L  N
Sbjct: 388 LSDN 391



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 112/191 (58%), Gaps = 5/191 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +LLN+  L ++   L+ LP + G LSKL++L++  N L+++PK+I     LE 
Sbjct: 143 LPDGFT-QLLNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLTQLER 201

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+  ++P+ +  ++ NLK L ++ N +  +P S+  L  LR LD   N +++L  
Sbjct: 202 LDLGSNEFSEVPEVLE-QIHNLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIETLDA 260

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           D+     LE L +S N   L+ LP SIG+L  L  L V  N++T+LP++IG L  L++L 
Sbjct: 261 DISGCEALEDLLLSSNM--LQHLPDSIGMLKKLTTLKVDDNQLTSLPNTIGSLSLLEELD 318

Query: 182 LEGNPLVS-PP 191
              N L S PP
Sbjct: 319 CSCNELESLPP 329



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 110/236 (46%), Gaps = 50/236 (21%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP +I  L  LK LD+S N ++  P  I+ C+ L 
Sbjct: 72  EELPKQLFNCQALKKLSMPDNDLSNLPTTIASLVNLKELDISKNGIQEFPDNIKCCKGLS 131

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   L+ LR+L+ R N LK++
Sbjct: 132 VVEASVNPITKLPD--GFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTM 189

Query: 120 PEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELD 158
           P+ +  L  LE L++  N                        L+T+P SIG L  L  LD
Sbjct: 190 PKSIHRLTQLERLDLGSNEFSEVPEVLEQIHNLKELWLDNNSLQTIPGSIGKLRQLRYLD 249

Query: 159 VSYNKITT-----------------------LPDSIGCLRKLQKLSLEGNPLVSPP 191
           ++ N+I T                       LPDSIG L+KL  L ++ N L S P
Sbjct: 250 LAKNRIETLDADISGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQLTSLP 305



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 95/167 (56%), Gaps = 6/167 (3%)

Query: 4   ESLTARLLNVVVLD---VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E+L A +     L+   + SN L+ LP+SIG L KL  L V  N L SLP TI +   LE
Sbjct: 256 ETLDADISGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQLTSLPNTIGSLSLLE 315

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ + N+L  LP TIG+ L +L+T + + N +  LP+ + +  ++ V+  R N L+ LP
Sbjct: 316 ELDCSCNELESLPPTIGY-LHSLRTFAADENFLSELPREIGNCKNVTVMSLRSNKLEFLP 374

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
           +++  +  L VLN+S N   L+ LP++   L  L  L +S N+   L
Sbjct: 375 DEIGQMTKLRVLNLSDN--RLKNLPFTFTKLKDLAALWLSDNQSKAL 419



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 101/187 (54%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL  + +L++  N LK +P SI  L++L+ LD+  N    +P+ +E   +L+EL  + N
Sbjct: 171 GRLSKLRILELRENHLKTMPKSIHRLTQLERLDLGSNEFSEVPEVLEQIHNLKELWLDNN 230

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ +P +IG +L  L+ L +  N+I  L   ++   +L  L    N L+ LP+ +  L 
Sbjct: 231 SLQTIPGSIG-KLRQLRYLDLAKNRIETLDADISGCEALEDLLLSSNMLQHLPDSIGMLK 289

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L  L +  N   L +LP +IG L  L ELD S N++ +LP +IG L  L+  + + N L
Sbjct: 290 KLTTLKVDDN--QLTSLPNTIGSLSLLEELDCSCNELESLPPTIGYLHSLRTFAADENFL 347

Query: 188 VSPPMDV 194
              P ++
Sbjct: 348 SELPREI 354



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/136 (41%), Positives = 75/136 (55%), Gaps = 2/136 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+S+   L  +  L V  NQL  LPN+IG LS L+ LD S N LESLP TI    SL  
Sbjct: 281 LPDSI-GMLKKLTTLKVDDNQLTSLPNTIGSLSLLEELDCSCNELESLPPTIGYLHSLRT 339

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
             A+ N L +LP  IG    N+  +S+  NK+  LP  +  +T LRVL+   N LK+LP 
Sbjct: 340 FAADENFLSELPREIG-NCKNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPF 398

Query: 122 DLENLINLEVLNISQN 137
               L +L  L +S N
Sbjct: 399 TFTKLKDLAALWLSDN 414



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 69  LRQLPDTI-GFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P  I  FE   L+ L ++ N+I  LP+ L +  +L+ L    N L +LP  + +L+
Sbjct: 47  LQQVPKEIFSFERT-LEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSNLPTTIASLV 105

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           NL+ L+IS+N   ++  P +I     L  ++ S N IT LPD    L  L +L L
Sbjct: 106 NLKELDISKNG--IQEFPDNIKCCKGLSVVEASVNPITKLPDGFTQLLNLTQLFL 158


>gi|124006156|ref|ZP_01690992.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123988333|gb|EAY27986.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 755

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/188 (37%), Positives = 108/188 (57%), Gaps = 3/188 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           + L+N+  L + S +L  LP S+G L  +K L+VSG LL +LP  +  C SL++LN   N
Sbjct: 238 SNLVNLEELRIASARLTQLPVSLGKLPAIKYLEVSGALLTTLPNILGQCFSLDQLNVANN 297

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           ++R LPD++G +L  LKTL ++ N +  LP S+T    L VL  + N +K+LP D+  L 
Sbjct: 298 EIRALPDSLG-QLTQLKTLDVSNNLLNRLPNSMTACKLLTVLHIKNNQIKTLPADIGKLA 356

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L   N+  N   L +LP SI  + +L  L ++ N +T+LP  +G L  L  L +  N L
Sbjct: 357 HLTSFNVEHN--QLGSLPESIAEISTLGNLFLNNNYLTSLPKQLGQLSCLTMLYVNNNQL 414

Query: 188 VSPPMDVV 195
              P  +V
Sbjct: 415 TQLPESMV 422



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/180 (37%), Positives = 107/180 (59%), Gaps = 4/180 (2%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           + +L V++NQL  LP S+  L  L+ L +  N L  LPK I   R+LE +N N N+   +
Sbjct: 404 LTMLYVNNNQLTQLPESMVRLVNLRYLLLKRNKLRMLPKNIGQWRNLEVINLNHNQFDHI 463

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENL-INLEV 131
           P+T+ F+L  L+ ++I  N++  +P ++   T+LR L+   NC++ LP  +  L  +L  
Sbjct: 464 PETL-FDLPKLQGVNIRNNRVAFIPSNVGKATNLRNLNVSENCIRVLPASIGKLGTHLAS 522

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L++++N   L  +P  IG L+ LV LD+S+N++T LP SI  L  LQ+L L  N L + P
Sbjct: 523 LHLAKN--QLTQVPEEIGNLLHLVTLDLSHNQLTELPTSITQLENLQELYLNNNQLKALP 580



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 106/201 (52%), Gaps = 24/201 (11%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L+V +N+++ LP+S+G L++LK LDVS NLL  LP ++  C+ L  L+   N+++ LP  
Sbjct: 292 LNVANNEIRALPDSLGQLTQLKTLDVSNNLLNRLPNSMTACKLLTVLHIKNNQIKTLPAD 351

Query: 76  IG----------------------FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL 113
           IG                       E+  L  L +N N +  LP+ L  L+ L +L    
Sbjct: 352 IGKLAHLTSFNVEHNQLGSLPESIAEISTLGNLFLNNNYLTSLPKQLGQLSCLTMLYVNN 411

Query: 114 NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGC 173
           N L  LPE +  L+NL  L + +N   L  LP +IG   +L  +++++N+   +P+++  
Sbjct: 412 NQLTQLPESMVRLVNLRYLLLKRN--KLRMLPKNIGQWRNLEVINLNHNQFDHIPETLFD 469

Query: 174 LRKLQKLSLEGNPLVSPPMDV 194
           L KLQ +++  N +   P +V
Sbjct: 470 LPKLQGVNIRNNRVAFIPSNV 490



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 85/171 (49%), Gaps = 3/171 (1%)

Query: 26  LPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKT 85
            P  I  ++ LK L V    L ++ + I N  +LEEL     +L QLP ++G +L  +K 
Sbjct: 210 FPKVISRITSLKKLQVYHCALPNIDENISNLVNLEELRIASARLTQLPVSLG-KLPAIKY 268

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L ++   +  LP  L    SL  L+   N +++LP+ L  L  L+ L++S N   L  LP
Sbjct: 269 LEVSGALLTTLPNILGQCFSLDQLNVANNEIRALPDSLGQLTQLKTLDVSNNL--LNRLP 326

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
            S+     L  L +  N+I TLP  IG L  L   ++E N L S P  + E
Sbjct: 327 NSMTACKLLTVLHIKNNQIKTLPADIGKLAHLTSFNVEHNQLGSLPESIAE 377



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 122/266 (45%), Gaps = 49/266 (18%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+P+++  +  N+ V++++ NQ   +P ++  L KL+ +++  N +  +P  +    +L 
Sbjct: 439 MLPKNI-GQWRNLEVINLNHNQFDHIPETLFDLPKLQGVNIRNNRVAFIPSNVGKATNLR 497

Query: 61  ELNANFNKLRQLPDTIG-----------------------FELINLKTLSINCNKIVILP 97
            LN + N +R LP +IG                         L++L TL ++ N++  LP
Sbjct: 498 NLNVSENCIRVLPASIGKLGTHLASLHLAKNQLTQVPEEIGNLLHLVTLDLSHNQLTELP 557

Query: 98  QSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN-------------------- 137
            S+T L +L+ L    N LK+LP  L  L NL VL +  N                    
Sbjct: 558 TSITQLENLQELYLNNNQLKALPAALSRLKNLRVLKVDHNQLKELSKGLDQLPFLKILTA 617

Query: 138 -FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
               LETLP +      L +L +S+N++  LP  +G L  L  L L+GN L   P + ++
Sbjct: 618 AHNQLETLPVNFTRSSQLHQLVLSHNQLNVLPSDMGDLNNLVLLDLQGNVLTDLP-ESLK 676

Query: 197 QGLSAVKGYLSEKMNNDHKSPKKKSW 222
           Q     K  L++   N  KS K + W
Sbjct: 677 QCRKLKKLLLND---NQLKSIKVEGW 699



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 3/169 (1%)

Query: 26  LPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKT 85
           LP+ +  L  L+ L ++   ++  PK I    SL++L      L  + + I   L+NL+ 
Sbjct: 187 LPDQLDQLKYLETLYLNNCSIDEFPKVISRITSLKKLQVYHCALPNIDENIS-NLVNLEE 245

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L I   ++  LP SL  L +++ L+     L +LP  L    +L+ LN++ N   +  LP
Sbjct: 246 LRIASARLTQLPVSLGKLPAIKYLEVSGALLTTLPNILGQCFSLDQLNVANN--EIRALP 303

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            S+G L  L  LDVS N +  LP+S+   + L  L ++ N + + P D+
Sbjct: 304 DSLGQLTQLKTLDVSNNLLNRLPNSMTACKLLTVLHIKNNQIKTLPADI 352



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 100/233 (42%), Gaps = 47/233 (20%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+     ++  L +  NQL  +P  IG L  L  LD+S N L  LP +I    +L+
Sbjct: 508 VLPASIGKLGTHLASLHLAKNQLTQVPEEIGNLLHLVTLDLSHNQLTELPTSITQLENLQ 567

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL  N N+L+ LP  +   L NL+ L ++ N++  L + L  L  L++L A  N L++LP
Sbjct: 568 ELYLNNNQLKALPAALS-RLKNLRVLKVDHNQLKELSKGLDQLPFLKILTAAHNQLETLP 626

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIG-------------LLMSLVE----------- 156
            +      L  L +S N   L  LP  +G             +L  L E           
Sbjct: 627 VNFTRSSQLHQLVLSHN--QLNVLPSDMGDLNNLVLLDLQGNVLTDLPESLKQCRKLKKL 684

Query: 157 --------------------LDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
                               L +  N+I  LP+++  L  L+ L L  NP+ +
Sbjct: 685 LLNDNQLKSIKVEGWQELQYLALKNNQIAVLPENLHQLIGLRTLYLNNNPITA 737



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 28/197 (14%)

Query: 58  SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK 117
           +L+EL  N +    LPD +  +L  L+TL +N   I   P+ ++ +TSL+ L      L 
Sbjct: 173 NLKELTINKSVKLYLPDQLD-QLKYLETLYLNNCSIDEFPKVISRITSLKKLQVYHCALP 231

Query: 118 SLPEDLENLINLEVLNISQ--------------NFQYLE-------TLPYSIGLLMSLVE 156
           ++ E++ NL+NLE L I+                 +YLE       TLP  +G   SL +
Sbjct: 232 NIDENISNLVNLEELRIASARLTQLPVSLGKLPAIKYLEVSGALLTTLPNILGQCFSLDQ 291

Query: 157 LDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKS 216
           L+V+ N+I  LPDS+G L +L+ L +  N L   P  +    L  V   L  K N     
Sbjct: 292 LNVANNEIRALPDSLGQLTQLKTLDVSNNLLNRLPNSMTACKLLTV---LHIKNNQIKTL 348

Query: 217 PKKKSWVGKLVKYGTFN 233
           P     +GKL    +FN
Sbjct: 349 PAD---IGKLAHLTSFN 362


>gi|403303038|ref|XP_003942154.1| PREDICTED: protein scribble homolog [Saimiri boliviensis
           boliviensis]
          Length = 1730

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 108/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 129 RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 188

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 189 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 246

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 247 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGSLRRLVCLDVSENRL 304

Query: 188 VSPPMD 193
              P +
Sbjct: 305 EELPAE 310



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 7/192 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   L
Sbjct: 99  VPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQL 156

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP   T L SL  L      L++L
Sbjct: 157 VELDVSRNDIPEIPESIKF-CKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 215

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L++
Sbjct: 216 PGDVGNLANLVTLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRE 273

Query: 180 LSLEGNPLVSPP 191
           L L+ N L + P
Sbjct: 274 LWLDRNQLSALP 285



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 151 ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 210

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 211 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 269

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 270 NLRELWLDRN--QLSALPPELGSLRRLVCLDVSENRLEELP 308



 Score = 86.7 bits (213), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 69/202 (34%), Positives = 104/202 (51%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 260 VLPDTLGA-LPNLRELWLDRNQLSALPPELGSLRRLVCLDVSENRLEELPAELGGLVLLT 318

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N LR+LPD IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 319 DLLLSQNLLRRLPDGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALP 377

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N   LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 378 RSLGKLTKLTNLNVDRN--QLEELPPEIGGCVALSVLSLRDNRLAVLPPELAHTSELHVL 435

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 436 DVAGNRLQSLPFALTHLNLKAL 457



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 67/185 (36%), Positives = 99/185 (53%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 222 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 281

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LP+ +  L  L
Sbjct: 282 SALPPELG-SLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL 340

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
            +L + QN   L  +  +IG   +L EL ++ N +  LP S+G L KL  L+++ N L  
Sbjct: 341 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNQLEE 398

Query: 190 PPMDV 194
            P ++
Sbjct: 399 LPPEI 403



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 192 LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 250

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L  L  L  LD   N L+ LP 
Sbjct: 251 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGSLRRLVCLDVSENRLEELPA 309

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L+ L  L +SQN   L  LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 310 ELGGLVLLTDLLLSQNL--LRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 367

Query: 182 LEGNPLVSPP 191
           L  N L++ P
Sbjct: 368 LTENLLMALP 377



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/136 (34%), Positives = 77/136 (56%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP+++     L  
Sbjct: 330 LPDGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTN 388

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N+L +LP  IG   + L  LS+  N++ +LP  L H + L VLD   N L+SLP 
Sbjct: 389 LNVDRNQLEELPPEIG-GCVALSVLSLRDNRLAVLPPELAHTSELHVLDVAGNRLQSLPF 447

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 448 ALTHL-NLKALWLAEN 462



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 27/164 (16%)

Query: 32  CLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINC 90
           C   ++ +D     L+++P+ I    RSLEEL  + N+LR+LP    F L+NL+ L ++ 
Sbjct: 82  CNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLLNLRKLGLSD 140

Query: 91  NKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL 150
           N+I                       + LP ++ N + L  L++S+N   +  +P SI  
Sbjct: 141 NEI-----------------------QRLPPEVANFMQLVELDVSRN--DIPEIPESIKF 175

Query: 151 LMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +L   D S N ++ LPD    LR L  L+L    L + P DV
Sbjct: 176 CKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDV 219


>gi|149026335|gb|EDL82578.1| rCG28757, isoform CRA_a [Rattus norvegicus]
          Length = 1506

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 108/184 (58%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP SIG L  L  LD+S N +E++   I  C +LE+
Sbjct: 215 LPEVLD-QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALED 273

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+QLPD+IG  L  L TL ++ N++ +LP ++ +L+ L   D   N L+SLP 
Sbjct: 274 LLLSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPP 332

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L + +NF  L  LP  IG   ++  + +  NK+  LP+ IG +++L+ L+
Sbjct: 333 TIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLN 390

Query: 182 LEGN 185
           L  N
Sbjct: 391 LSDN 394



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 108/233 (46%), Gaps = 50/233 (21%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  LK LD+S N ++  P+ I+ C+ L 
Sbjct: 75  EELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLT 134

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   L  LR+L+ R N LK+L
Sbjct: 135 IIEASVNPISKLPD--GFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTL 192

Query: 120 PEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELD 158
           P+ +  L  LE L++  N                        L+ LP SIG L  LV LD
Sbjct: 193 PKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD 252

Query: 159 VSYNKITT-----------------------LPDSIGCLRKLQKLSLEGNPLV 188
           +S N+I T                       LPDSIG L+KL  L ++ N L 
Sbjct: 253 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLT 305



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP+SIG L KL  L V  N L  LP TI N   LEE + + N+L  LP TIG+ 
Sbjct: 278 SNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGY- 336

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+TL+++ N +  LP+ +    ++ V+  R N L+ LPE++  +  L VLN+S N  
Sbjct: 337 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDN-- 394

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+ LP+S   L  L  L +S N+   L
Sbjct: 395 RLKNLPFSFTKLKELAALWLSDNQSKAL 422



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 69  LRQLP-DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P +   FE   L+ L ++ N+I  LP+ L +  +LR L    N L SLP  + +L+
Sbjct: 50  LQQVPKEVFNFERT-LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLV 108

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           NL+ L+IS+N   ++  P +I     L  ++ S N I+ LPD    L  L +L L
Sbjct: 109 NLKELDISKNG--VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYL 161



 Score = 40.4 bits (93), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 38/61 (62%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP  IG + +L+VL++S N L++LP +    + L  L  + N+ + 
Sbjct: 362 NVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKA 421

Query: 72  L 72
           L
Sbjct: 422 L 422


>gi|417772084|ref|ZP_12419974.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418680513|ref|ZP_13241762.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|418702821|ref|ZP_13263713.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|421115678|ref|ZP_15576078.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|400327871|gb|EJO80111.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409946041|gb|EKN96055.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|410012750|gb|EKO70841.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410767365|gb|EKR38040.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|455669508|gb|EMF34619.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 423

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 107/198 (54%), Gaps = 27/198 (13%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNAN---------- 65
           LD+ SN+LK +P  I  L  LKVL ++GN L SLPK IE  ++L+ LN            
Sbjct: 207 LDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVE 266

Query: 66  -------------FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDAR 112
                        +N+L + P  +G +L +LK LS+  N+I  LP  +T L  L+ L   
Sbjct: 267 ILELKNLLELNLYYNQLVEFPKEVG-QLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLS 325

Query: 113 LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
            N +  LP+++  L NLE L++S N   L  LP  IG L  L  L++  N++TTLP  I 
Sbjct: 326 GNKITILPKEILQLKNLEWLSLSNN--KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIE 383

Query: 173 CLRKLQKLSLEGNPLVSP 190
            L+ LQ+L L+ NP +SP
Sbjct: 384 QLKNLQRLELDSNP-ISP 400



 Score = 90.1 bits (222), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 103/183 (56%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V  LD+    LK LPN IG L  L+ LD+ GN    L K I   + L++LN N NKL  
Sbjct: 42  DVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTV 101

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ LS++ N++V LP+ +    +L+ L+   N L  LP+++  L NL+ 
Sbjct: 102 LPKEIG-QLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQE 160

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L++  N   L +LP  I  L SL  LD++ N+ TT+   +  L  L+ L L  N L + P
Sbjct: 161 LSLLSN--KLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIP 218

Query: 192 MDV 194
            ++
Sbjct: 219 KEI 221



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 107/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  N+   L   I  L  L+ L+++ N L  LPK I   ++L+EL+ + N
Sbjct: 61  GQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSN 120

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +  NL+ L+++ NK+ +LP+ +  L +L+ L    N L SLP ++E L 
Sbjct: 121 ELVNLPKEIG-QFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLK 179

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L+++ N     T+   + LL +L  LD+  NK+ T+P  I  L+ L+ L L GN L
Sbjct: 180 SLKNLDLNNN--EFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQL 237

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 238 TSLPKEI 244



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 105/179 (58%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L++++N+L  LP  IG L  L+ L +  N L +LPK I   ++L++LN + NKL  LP  
Sbjct: 92  LNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKE 151

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL+ LS+  NK++ LP  +  L SL+ LD   N   ++ +++  L  LE L++ 
Sbjct: 152 IG-QLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLR 210

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L+T+P  I  L SL  L ++ N++T+LP  I  L+ L+ L+L  N     P+++
Sbjct: 211 SN--KLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEI 267



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 1/103 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++  L ++ NQ+  LP  +  L  L+ L +SGN +  LPK I   ++LE L+ + N
Sbjct: 291 GQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNN 350

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD 110
           KL  LP  IG +L  L+ L +  N++  LP+ +  L +L+ L+
Sbjct: 351 KLNALPKEIG-QLKKLQRLELGNNQLTTLPKEIEQLKNLQRLE 392



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R LD     LK+LP  +  L NL+ L++  N   +  L   I  L  L 
Sbjct: 33  LAKALQNPADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTI--LSKEIWQLKDLQ 90

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +L+++ NK+T LP  IG L+ LQ+LSL  N LV+ P ++
Sbjct: 91  KLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEI 129


>gi|418710297|ref|ZP_13271068.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410769233|gb|EKR44475.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 423

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 107/198 (54%), Gaps = 27/198 (13%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNAN---------- 65
           LD+ SN+LK +P  I  L  LKVL ++GN L SLPK IE  ++L+ LN            
Sbjct: 207 LDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVE 266

Query: 66  -------------FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDAR 112
                        +N+L + P  +G +L +LK LS+  N+I  LP  +T L  L+ L   
Sbjct: 267 ILELKNLLELNLYYNQLVEFPKEVG-QLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLS 325

Query: 113 LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
            N +  LP+++  L NLE L++S N   L  LP  IG L  L  L++  N++TTLP  I 
Sbjct: 326 GNKITILPKEILQLKNLEWLSLSNN--KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIE 383

Query: 173 CLRKLQKLSLEGNPLVSP 190
            L+ LQ+L L+ NP +SP
Sbjct: 384 QLKNLQRLELDSNP-ISP 400



 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 104/183 (56%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V  LD+    LK LPN IG L  L+ LD+ GN    L K I   + L++LN N NKL  
Sbjct: 42  DVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTV 101

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ LS++ N++V LP+ +    +L+ L+   N L  LP+++  L NL+ 
Sbjct: 102 LPKEIG-QLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQE 160

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L++  N   L +LP  I  L SL  LD+++N+ TT+   +  L  L+ L L  N L + P
Sbjct: 161 LSLLSN--KLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIP 218

Query: 192 MDV 194
            ++
Sbjct: 219 KEI 221



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 107/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  N+   L   I  L  L+ L+++ N L  LPK I   ++L+EL+ + N
Sbjct: 61  GQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSN 120

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +  NL+ L+++ NK+ +LP+ +  L +L+ L    N L SLP ++E L 
Sbjct: 121 ELVNLPKEIG-QFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLK 179

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L+++ N     T+   + LL +L  LD+  NK+ T+P  I  L+ L+ L L GN L
Sbjct: 180 SLKNLDLNHN--EFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQL 237

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 238 TSLPKEI 244



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 105/179 (58%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L++++N+L  LP  IG L  L+ L +  N L +LPK I   ++L++LN + NKL  LP  
Sbjct: 92  LNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKE 151

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL+ LS+  NK++ LP  +  L SL+ LD   N   ++ +++  L  LE L++ 
Sbjct: 152 IG-QLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLR 210

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L+T+P  I  L SL  L ++ N++T+LP  I  L+ L+ L+L  N     P+++
Sbjct: 211 SN--KLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEI 267



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 1/103 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++  L ++ NQ+  LP  +  L  L+ L +SGN +  LPK I   ++LE L+ + N
Sbjct: 291 GQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNN 350

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD 110
           KL  LP  IG +L  L+ L +  N++  LP+ +  L +L+ L+
Sbjct: 351 KLNALPKEIG-QLKKLQRLELGNNQLTTLPKEIEQLKNLQRLE 392



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R LD     LK+LP  +  L NL+ L++  N   +  L   I  L  L 
Sbjct: 33  LEKALQNPADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTI--LSKEIWQLKDLQ 90

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +L+++ NK+T LP  IG L+ LQ+LSL  N LV+ P ++
Sbjct: 91  KLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEI 129


>gi|255082904|ref|XP_002504438.1| predicted protein [Micromonas sp. RCC299]
 gi|226519706|gb|ACO65696.1| predicted protein [Micromonas sp. RCC299]
          Length = 487

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/186 (38%), Positives = 106/186 (56%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RL ++  L +  N+L  LP  IG L+ LK L ++ N L  LP  I    SL  L    N+
Sbjct: 203 RLTSLRELYLEDNRLTSLPAEIGQLALLKELWLNDNELTGLPAEIGQLTSLRGLYLYGNQ 262

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  +P  IG +L++L+ L +  N++  +P  +  LTSL VL+   N L S+P ++  L  
Sbjct: 263 LTSVPAEIG-QLMSLRELYLQGNQLTSVPAEIGQLTSLDVLNLSGNQLTSVPAEIGQLTF 321

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L  L++S N  YL +LP  IG LMSL  LD+  N++ ++P  IG LR L++L L GN L 
Sbjct: 322 LGCLDLSYN--YLTSLPAEIGQLMSLRLLDLDDNRLASVPAEIGQLRSLRELFLNGNLLT 379

Query: 189 SPPMDV 194
           S P ++
Sbjct: 380 SVPAEI 385



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 105/187 (56%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++ +L + +NQL  +P  IG L+ LK LD+  N L S+P  +    SLE L    N
Sbjct: 110 GQLTSLGLLGLDNNQLSSVPAEIGRLTALKGLDLQKNQLTSVPAEVGQLTSLEALRLQHN 169

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  IG +L +L+ L +  N++  +P  +  LTSLR L    N L SLP ++  L 
Sbjct: 170 RLTSVPAEIG-QLASLEKLYVADNQLTSMPAEIWRLTSLRELYLEDNRLTSLPAEIGQLA 228

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L ++ N   L  LP  IG L SL  L +  N++T++P  IG L  L++L L+GN L
Sbjct: 229 LLKELWLNDN--ELTGLPAEIGQLTSLRGLYLYGNQLTSVPAEIGQLMSLRELYLQGNQL 286

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 287 TSVPAEI 293



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 118/221 (53%), Gaps = 9/221 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL ++  L +  NQL  LP  IG L+ L+ L +  N L S+P  I    SL+ L    N
Sbjct: 41  GRLASLTELYLEDNQLTSLPAEIGQLASLEWLCLIDNQLTSVPAEIGQLASLDGLYLGKN 100

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  IG +L +L  L ++ N++  +P  +  LT+L+ LD + N L S+P ++  L 
Sbjct: 101 QLTSVPAEIG-QLTSLGLLGLDNNQLSSVPAEIGRLTALKGLDLQKNQLTSVPAEVGQLT 159

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +LE L +  N   L ++P  IG L SL +L V+ N++T++P  I  L  L++L LE N L
Sbjct: 160 SLEALRLQHN--RLTSVPAEIGQLASLEKLYVADNQLTSMPAEIWRLTSLRELYLEDNRL 217

Query: 188 VSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVK 228
            S P ++ +  L      L E   ND++     + +G+L  
Sbjct: 218 TSLPAEIGQLAL------LKELWLNDNELTGLPAEIGQLTS 252



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 100/181 (55%), Gaps = 3/181 (1%)

Query: 14  VVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLP 73
           +VL++  NQL  +P  IG L+ L+ L ++ N L S+P  I    SL EL    N+L  LP
Sbjct: 1   MVLNLSGNQLTSVPAEIGQLTSLERLCLNDNQLTSVPAEIGRLASLTELYLEDNQLTSLP 60

Query: 74  DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLN 133
             IG +L +L+ L +  N++  +P  +  L SL  L    N L S+P ++  L +L +L 
Sbjct: 61  AEIG-QLASLEWLCLIDNQLTSVPAEIGQLASLDGLYLGKNQLTSVPAEIGQLTSLGLLG 119

Query: 134 ISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMD 193
           +  N   L ++P  IG L +L  LD+  N++T++P  +G L  L+ L L+ N L S P +
Sbjct: 120 LDNN--QLSSVPAEIGRLTALKGLDLQKNQLTSVPAEVGQLTSLEALRLQHNRLTSVPAE 177

Query: 194 V 194
           +
Sbjct: 178 I 178



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 108/187 (57%), Gaps = 4/187 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L+++  L +  NQL  +P  IG L+ L VL++SGN L S+P  I     L  L+ ++N
Sbjct: 271 GQLMSLRELYLQGNQLTSVPAEIGQLTSLDVLNLSGNQLTSVPAEIGQLTFLGCLDLSYN 330

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP  IG +L++L+ L ++ N++  +P  +  L SLR L    N L S+P ++  L 
Sbjct: 331 YLTSLPAEIG-QLMSLRLLDLDDNRLASVPAEIGQLRSLRELFLNGNLLTSVPAEIGQLT 389

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
             E+    +N Q L ++P  +G L +L +L++S NK+T++P  IG L  L+ L L GN L
Sbjct: 390 VREL--YLENNQ-LTSVPAEVGQLAALEQLNLSRNKLTSVPAEIGLLTSLRWLLLNGNQL 446

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 447 TSVPGEI 453



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 3/177 (1%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           ++ NQL  +P  IG L+ L  L +  N L SLP  I    SLE L    N+L  +P  IG
Sbjct: 28  LNDNQLTSVPAEIGRLASLTELYLEDNQLTSLPAEIGQLASLEWLCLIDNQLTSVPAEIG 87

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
            +L +L  L +  N++  +P  +  LTSL +L    N L S+P ++  L  L+ L++ +N
Sbjct: 88  -QLASLDGLYLGKNQLTSVPAEIGQLTSLGLLGLDNNQLSSVPAEIGRLTALKGLDLQKN 146

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
              L ++P  +G L SL  L + +N++T++P  IG L  L+KL +  N L S P ++
Sbjct: 147 --QLTSVPAEVGQLTSLEALRLQHNRLTSVPAEIGQLASLEKLYVADNQLTSMPAEI 201



 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/172 (36%), Positives = 84/172 (48%), Gaps = 28/172 (16%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  N L  LP  IG L  L++LD+  N L S+P  I   RSL EL  N N L  +P  
Sbjct: 325 LDLSYNYLTSLPAEIGQLMSLRLLDLDDNRLASVPAEIGQLRSLRELFLNGNLLTSVPAE 384

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG                         LT +R L    N L S+P ++  L  LE LN+S
Sbjct: 385 IG------------------------QLT-VRELYLENNQLTSVPAEVGQLAALEQLNLS 419

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL-EGNP 186
           +N   L ++P  IGLL SL  L ++ N++T++P  IG L  L+ L L  G P
Sbjct: 420 RN--KLTSVPAEIGLLTSLRWLLLNGNQLTSVPGEIGQLTSLRLLFLSSGEP 469



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 75/128 (58%), Gaps = 2/128 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L+++ +LD+  N+L  +P  IG L  L+ L ++GNLL S+P  I    ++ EL    N
Sbjct: 340 GQLMSLRLLDLDDNRLASVPAEIGQLRSLRELFLNGNLLTSVPAEIGQL-TVRELYLENN 398

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  +G +L  L+ L+++ NK+  +P  +  LTSLR L    N L S+P ++  L 
Sbjct: 399 QLTSVPAEVG-QLAALEQLNLSRNKLTSVPAEIGLLTSLRWLLLNGNQLTSVPGEIGQLT 457

Query: 128 NLEVLNIS 135
           +L +L +S
Sbjct: 458 SLRLLFLS 465


>gi|429962035|gb|ELA41579.1| hypothetical protein VICG_01443 [Vittaforma corneae ATCC 50505]
          Length = 462

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 111/190 (58%), Gaps = 4/190 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  LD++ N+L+ L   IG L  L+ LD+SGN L +LP  I    +L  L+ N N
Sbjct: 122 GELKNLKYLDLYDNKLERLSPEIGRLKNLRELDLSGNKLRTLPSEIGELVNLGILHLNDN 181

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTS-LRVLDARLNCLKSLPEDLENL 126
           KL +LP  IG  L +L  L +N N +  LP+++ +L   L  L    N LK+LP ++  L
Sbjct: 182 KLERLPPEIG-RLKDLWRLYLNGNNLEALPETIENLKDRLWYLYLNGNKLKTLPPEIGEL 240

Query: 127 INLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           +NL +L+++ N   LE LP  IG L +L EL ++ N +  LP++I  L+KLQ L L GN 
Sbjct: 241 VNLGILHLNDN--KLERLPPEIGRLKNLRELGLNGNNLEALPETIRELKKLQYLYLNGNK 298

Query: 187 LVSPPMDVVE 196
           L + P ++ E
Sbjct: 299 LKTLPPEIGE 308



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/224 (36%), Positives = 116/224 (51%), Gaps = 4/224 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE++      +  L ++ N+LK LP  IG L  L +L ++ N LE LP  I   ++L E
Sbjct: 209 LPETIENLKDRLWYLYLNGNKLKTLPPEIGELVNLGILHLNDNKLERLPPEIGRLKNLRE 268

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  N N L  LP+TI  EL  L+ L +N NK+  LP  +  L  L VL    N L+ LP 
Sbjct: 269 LGLNGNNLEALPETI-RELKKLQYLYLNGNKLKTLPPEIGELKWLLVLHLNGNKLERLPP 327

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L  L  L ++ N    ETLP  IG L +L  L +S NK+  LP  I  L+ L++L 
Sbjct: 328 EIGELEGLYTLYLNDN--EFETLPSEIGKLKNLRHLHLSGNKLERLPYVIAELKNLRELD 385

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGK 225
           L GN L + P  +V   LS     L  + NN ++    K  +GK
Sbjct: 386 LSGNKLETLPSYIVRM-LSGSLQLLDLRGNNIYEVGDGKRTLGK 428



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/181 (39%), Positives = 102/181 (56%), Gaps = 2/181 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L ++ N+ + L   IG L  LK LD+  N LE L   I   ++L EL+ + NKLR LP  
Sbjct: 107 LYLNGNEFETLSPVIGELKNLKYLDLYDNKLERLSPEIGRLKNLRELDLSGNKLRTLPSE 166

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG EL+NL  L +N NK+  LP  +  L  L  L    N L++LPE +ENL +  +  + 
Sbjct: 167 IG-ELVNLGILHLNDNKLERLPPEIGRLKDLWRLYLNGNNLEALPETIENLKD-RLWYLY 224

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            N   L+TLP  IG L++L  L ++ NK+  LP  IG L+ L++L L GN L + P  + 
Sbjct: 225 LNGNKLKTLPPEIGELVNLGILHLNDNKLERLPPEIGRLKNLRELGLNGNNLEALPETIR 284

Query: 196 E 196
           E
Sbjct: 285 E 285



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/211 (36%), Positives = 109/211 (51%), Gaps = 27/211 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLD-----------------------VSGN 44
            RL N+  LD+  N+L+ LP+ IG L  L +L                        ++GN
Sbjct: 145 GRLKNLRELDLSGNKLRTLPSEIGELVNLGILHLNDNKLERLPPEIGRLKDLWRLYLNGN 204

Query: 45  LLESLPKTIENCRS-LEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHL 103
            LE+LP+TIEN +  L  L  N NKL+ LP  IG EL+NL  L +N NK+  LP  +  L
Sbjct: 205 NLEALPETIENLKDRLWYLYLNGNKLKTLPPEIG-ELVNLGILHLNDNKLERLPPEIGRL 263

Query: 104 TSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
            +LR L    N L++LPE +  L  L+ L ++ N   L+TLP  IG L  L+ L ++ NK
Sbjct: 264 KNLRELGLNGNNLEALPETIRELKKLQYLYLNGN--KLKTLPPEIGELKWLLVLHLNGNK 321

Query: 164 ITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +  LP  IG L  L  L L  N   + P ++
Sbjct: 322 LERLPPEIGELEGLYTLYLNDNEFETLPSEI 352



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 65/172 (37%), Positives = 92/172 (53%), Gaps = 4/172 (2%)

Query: 26  LPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKT 85
           L + I  L  L  LD+S   L SLP  I    SL+ L  N N+   L   IG EL NLK 
Sbjct: 71  LHDVIEELKYLCCLDLSRKELRSLPPEIGELESLDGLYLNGNEFETLSPVIG-ELKNLKY 129

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L +  NK+  L   +  L +LR LD   N L++LP ++  L+NL +L+++ N   LE LP
Sbjct: 130 LDLYDNKLERLSPEIGRLKNLRELDLSGNKLRTLPSEIGELVNLGILHLNDN--KLERLP 187

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLR-KLQKLSLEGNPLVSPPMDVVE 196
             IG L  L  L ++ N +  LP++I  L+ +L  L L GN L + P ++ E
Sbjct: 188 PEIGRLKDLWRLYLNGNNLEALPETIENLKDRLWYLYLNGNKLKTLPPEIGE 239


>gi|417760636|ref|ZP_12408653.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417773199|ref|ZP_12421083.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|417784393|ref|ZP_12432099.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|418673942|ref|ZP_13235253.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409943556|gb|EKN89156.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|409952210|gb|EKO06723.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|410577040|gb|EKQ40038.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410579220|gb|EKQ47070.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 423

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 107/198 (54%), Gaps = 27/198 (13%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNAN---------- 65
           LD+ SN+LK +P  I  L  LKVL ++GN L SLPK IE  ++L+ LN            
Sbjct: 207 LDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVE 266

Query: 66  -------------FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDAR 112
                        +N+L + P  +G +L +LK LS+  N+I  LP  +T L  L+ L   
Sbjct: 267 ILELKNLLELNLYYNQLVEFPKEVG-QLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLS 325

Query: 113 LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
            N +  LP+++  L NLE L++S N   L  LP  IG L  L  L++  N++TTLP  I 
Sbjct: 326 GNKITILPKEILQLKNLEWLSLSNN--KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIE 383

Query: 173 CLRKLQKLSLEGNPLVSP 190
            L+ LQ+L L+ NP +SP
Sbjct: 384 QLKNLQRLELDSNP-ISP 400



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 103/183 (56%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V  LD+    LK LPN IG L  L+ LD+ GN    L K I   + L++LN N NKL  
Sbjct: 42  DVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTV 101

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ LS++ N++V LP+ +    +L+ L+   N L  LP+++  L NL+ 
Sbjct: 102 LPKEIG-QLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQE 160

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L++  N   L +LP  I  L SL  LD++ N+ TT+   +  L  L+ L L  N L + P
Sbjct: 161 LSLLSN--KLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIP 218

Query: 192 MDV 194
            ++
Sbjct: 219 KEI 221



 Score = 86.7 bits (213), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 107/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  N+   L   I  L  L+ L+++ N L  LPK I   ++L+EL+ + N
Sbjct: 61  GQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSN 120

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +  NL+ L+++ NK+ +LP+ +  L +L+ L    N L SLP ++E L 
Sbjct: 121 ELVNLPKEIG-QFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLK 179

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L+++ N     T+   + LL +L  LD+  NK+ T+P  I  L+ L+ L L GN L
Sbjct: 180 SLKNLDLNNN--EFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQL 237

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 238 TSLPKEI 244



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 105/179 (58%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L++++N+L  LP  IG L  L+ L +  N L +LPK I   ++L++LN + NKL  LP  
Sbjct: 92  LNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKE 151

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL+ LS+  NK++ LP  +  L SL+ LD   N   ++ +++  L  LE L++ 
Sbjct: 152 IG-QLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLR 210

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L+T+P  I  L SL  L ++ N++T+LP  I  L+ L+ L+L  N     P+++
Sbjct: 211 SN--KLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEI 267



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 1/103 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++  L ++ NQ+  LP  +  L  L+ L +SGN +  LPK I   ++LE L+ + N
Sbjct: 291 GQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNN 350

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD 110
           KL  LP  IG +L  L+ L +  N++  LP+ +  L +L+ L+
Sbjct: 351 KLNALPKEIG-QLKKLQRLELGNNQLTTLPKEIEQLKNLQRLE 392



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R LD     LK+LP  +  L NL+ L++  N   +  L   I  L  L 
Sbjct: 33  LEKALQNPADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTI--LSKEIWQLKDLQ 90

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +L+++ NK+T LP  IG L+ LQ+LSL  N LV+ P ++
Sbjct: 91  KLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEI 129


>gi|348555824|ref|XP_003463723.1| PREDICTED: protein scribble homolog isoform 3 [Cavia porcellus]
          Length = 1601

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 69/186 (37%), Positives = 109/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C+SLE  + + N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKSLEIADFSGNP 116

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 117 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 174

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 175 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 188 VSPPMD 193
              P++
Sbjct: 233 EELPVE 238



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 65/192 (33%), Positives = 106/192 (55%), Gaps = 7/192 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   L
Sbjct: 27  VPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F   +L+    + N +  LP   T L SL  L      L++L
Sbjct: 85  VELDVSRNDIPEIPESIKF-CKSLEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L++
Sbjct: 144 PGDVGNLANLVTLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRE 201

Query: 180 LSLEGNPLVSPP 191
           L L+ N L + P
Sbjct: 202 LWLDRNQLSALP 213



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIKFCKSLEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 139 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 198 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 236



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 69/202 (34%), Positives = 106/202 (52%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 188 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLVLLT 246

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N L++LPD IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 247 DLLLSQNLLQRLPDGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALP 305

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++ TLP  +    +L  L
Sbjct: 306 RSLGKLTKLTNLNVDRN--HLEVLPPEIGGCVALSVLSLRDNRLATLPPELAHTAELHVL 363

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 364 DVAGNRLRSLPFALTHLNLKAL 385



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 70/183 (38%), Positives = 100/183 (54%), Gaps = 4/183 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 150 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 209

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LP+ +  L  L
Sbjct: 210 SALPPELG-NLRRLVCLDVSENRLEELPVELGGLVLLTDLLLSQNLLQRLPDGIGQLKQL 268

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL-V 188
            +L + QN   L  +  +IG   +L EL ++ N +T LP S+G L KL  L+++ N L V
Sbjct: 269 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVDRNHLEV 326

Query: 189 SPP 191
            PP
Sbjct: 327 LPP 329



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP+++     L  
Sbjct: 258 LPDGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTN 316

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++  LP  L H   L VLD   N L+SLP 
Sbjct: 317 LNVDRNHLEVLPPEIG-GCVALSVLSLRDNRLATLPPELAHTAELHVLDVAGNRLRSLPF 375

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 376 ALTHL-NLKALWLAEN 390



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 54/173 (31%), Positives = 83/173 (47%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           LKC+P    C   ++ +D     L+++P+ I    RSLEEL  + N+LR+LP    F L+
Sbjct: 2   LKCIP-LWRCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLL 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I                       + LP ++ N + L  L++S+N   +
Sbjct: 60  NLRKLGLSDNEI-----------------------QRLPPEVANFMQLVELDVSRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P SI    SL   D S N ++ LPD    LR L  L+L    L + P DV
Sbjct: 95  PEIPESIKFCKSLEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDV 147


>gi|348555822|ref|XP_003463722.1| PREDICTED: protein scribble homolog isoform 2 [Cavia porcellus]
          Length = 1629

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 69/186 (37%), Positives = 109/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C+SLE  + + N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKSLEIADFSGNP 116

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 117 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 174

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 175 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 188 VSPPMD 193
              P++
Sbjct: 233 EELPVE 238



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 65/192 (33%), Positives = 106/192 (55%), Gaps = 7/192 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   L
Sbjct: 27  VPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F   +L+    + N +  LP   T L SL  L      L++L
Sbjct: 85  VELDVSRNDIPEIPESIKF-CKSLEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L++
Sbjct: 144 PGDVGNLANLVTLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRE 201

Query: 180 LSLEGNPLVSPP 191
           L L+ N L + P
Sbjct: 202 LWLDRNQLSALP 213



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIKFCKSLEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 139 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 198 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 236



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 69/202 (34%), Positives = 106/202 (52%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 188 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLVLLT 246

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N L++LPD IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 247 DLLLSQNLLQRLPDGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALP 305

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++ TLP  +    +L  L
Sbjct: 306 RSLGKLTKLTNLNVDRN--HLEVLPPEIGGCVALSVLSLRDNRLATLPPELAHTAELHVL 363

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 364 DVAGNRLRSLPFALTHLNLKAL 385



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 70/183 (38%), Positives = 100/183 (54%), Gaps = 4/183 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 150 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 209

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LP+ +  L  L
Sbjct: 210 SALPPELG-NLRRLVCLDVSENRLEELPVELGGLVLLTDLLLSQNLLQRLPDGIGQLKQL 268

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL-V 188
            +L + QN   L  +  +IG   +L EL ++ N +T LP S+G L KL  L+++ N L V
Sbjct: 269 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVDRNHLEV 326

Query: 189 SPP 191
            PP
Sbjct: 327 LPP 329



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP+++     L  
Sbjct: 258 LPDGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTN 316

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++  LP  L H   L VLD   N L+SLP 
Sbjct: 317 LNVDRNHLEVLPPEIG-GCVALSVLSLRDNRLATLPPELAHTAELHVLDVAGNRLRSLPF 375

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 376 ALTHL-NLKALWLAEN 390



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 54/173 (31%), Positives = 83/173 (47%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           LKC+P    C   ++ +D     L+++P+ I    RSLEEL  + N+LR+LP    F L+
Sbjct: 2   LKCIP-LWRCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLL 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I                       + LP ++ N + L  L++S+N   +
Sbjct: 60  NLRKLGLSDNEI-----------------------QRLPPEVANFMQLVELDVSRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P SI    SL   D S N ++ LPD    LR L  L+L    L + P DV
Sbjct: 95  PEIPESIKFCKSLEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDV 147


>gi|348555820|ref|XP_003463721.1| PREDICTED: protein scribble homolog isoform 1 [Cavia porcellus]
          Length = 1653

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 69/186 (37%), Positives = 109/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C+SLE  + + N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKSLEIADFSGNP 116

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 117 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 174

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 175 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 188 VSPPMD 193
              P++
Sbjct: 233 EELPVE 238



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 65/192 (33%), Positives = 106/192 (55%), Gaps = 7/192 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   L
Sbjct: 27  VPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F   +L+    + N +  LP   T L SL  L      L++L
Sbjct: 85  VELDVSRNDIPEIPESIKF-CKSLEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L++
Sbjct: 144 PGDVGNLANLVTLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRE 201

Query: 180 LSLEGNPLVSPP 191
           L L+ N L + P
Sbjct: 202 LWLDRNQLSALP 213



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIKFCKSLEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 139 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 198 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 236



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 69/202 (34%), Positives = 106/202 (52%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 188 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLVLLT 246

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N L++LPD IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 247 DLLLSQNLLQRLPDGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALP 305

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++ TLP  +    +L  L
Sbjct: 306 RSLGKLTKLTNLNVDRN--HLEVLPPEIGGCVALSVLSLRDNRLATLPPELAHTAELHVL 363

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 364 DVAGNRLRSLPFALTHLNLKAL 385



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 70/183 (38%), Positives = 100/183 (54%), Gaps = 4/183 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 150 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 209

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LP+ +  L  L
Sbjct: 210 SALPPELG-NLRRLVCLDVSENRLEELPVELGGLVLLTDLLLSQNLLQRLPDGIGQLKQL 268

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL-V 188
            +L + QN   L  +  +IG   +L EL ++ N +T LP S+G L KL  L+++ N L V
Sbjct: 269 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVDRNHLEV 326

Query: 189 SPP 191
            PP
Sbjct: 327 LPP 329



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP+++     L  
Sbjct: 258 LPDGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTN 316

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++  LP  L H   L VLD   N L+SLP 
Sbjct: 317 LNVDRNHLEVLPPEIG-GCVALSVLSLRDNRLATLPPELAHTAELHVLDVAGNRLRSLPF 375

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 376 ALTHL-NLKALWLAEN 390



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 54/173 (31%), Positives = 83/173 (47%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           LKC+P    C   ++ +D     L+++P+ I    RSLEEL  + N+LR+LP    F L+
Sbjct: 2   LKCIP-LWRCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLL 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I                       + LP ++ N + L  L++S+N   +
Sbjct: 60  NLRKLGLSDNEI-----------------------QRLPPEVANFMQLVELDVSRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P SI    SL   D S N ++ LPD    LR L  L+L    L + P DV
Sbjct: 95  PEIPESIKFCKSLEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDV 147


>gi|345322698|ref|XP_003430621.1| PREDICTED: leucine-rich repeat-containing protein 7
           [Ornithorhynchus anatinus]
          Length = 1510

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP SIG L  L  LD+S N +E++   I  C +LE+
Sbjct: 123 LPEVLD-QIQNLRELWMDNNALQTLPGSIGKLKMLVYLDMSKNRIETIDMEISGCEALED 181

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+ LPD+IG  L  L TL ++ N++ +LP ++ +L+ L   D   N L+SLP 
Sbjct: 182 LLLSSNMLQHLPDSIGL-LKKLTTLKVDDNQLTLLPNAIGNLSLLEEFDCSCNELESLPS 240

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L + +NF  L  LP  IG   ++  + +  NK+  LP+ IG ++KL+ L+
Sbjct: 241 TIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLN 298

Query: 182 LEGN 185
           L  N
Sbjct: 299 LSDN 302



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 100/201 (49%), Gaps = 32/201 (15%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  N L  LP SI  L  LK LD+S N ++  P+ I+ C+ L  + A+ N + +LPD 
Sbjct: 17  LSIPDNDLSNLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPD- 75

Query: 76  IGF-ELINLKTLSINCNKIVILP----QSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            GF +L+NL  L +N   +  LP    +S+  L  L  LD   N    LPE L+ + NL 
Sbjct: 76  -GFTQLLNLTQLYLNDAFLEFLPANFGRSMHKLAQLERLDLGNNEFNELPEVLDQIQNLR 134

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITT-----------------------L 167
            L +  N   L+TLP SIG L  LV LD+S N+I T                       L
Sbjct: 135 ELWMDNN--ALQTLPGSIGKLKMLVYLDMSKNRIETIDMEISGCEALEDLLLSSNMLQHL 192

Query: 168 PDSIGCLRKLQKLSLEGNPLV 188
           PDSIG L+KL  L ++ N L 
Sbjct: 193 PDSIGLLKKLTTLKVDDNQLT 213



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/148 (39%), Positives = 85/148 (57%), Gaps = 3/148 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP+SIG L KL  L V  N L  LP  I N   LEE + + N+L  LP TIG+ 
Sbjct: 186 SNMLQHLPDSIGLLKKLTTLKVDDNQLTLLPNAIGNLSLLEEFDCSCNELESLPSTIGY- 244

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+TL+++ N +  LP+ +    ++ V+  R N L+ LPE++  +  L VLN+S N  
Sbjct: 245 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDN-- 302

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+ LP+S   L  L  L +S N+   L
Sbjct: 303 RLKNLPFSFTKLKELAALWLSDNQSKAL 330



 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 105/197 (53%), Gaps = 8/197 (4%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIG----CLSKLKVLDVSGNLLESLPKTIENCR 57
           +P+  T +LLN+  L ++   L+ LP + G     L++L+ LD+  N    LP+ ++  +
Sbjct: 73  LPDGFT-QLLNLTQLYLNDAFLEFLPANFGRSMHKLAQLERLDLGNNEFNELPEVLDQIQ 131

Query: 58  SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK 117
           +L EL  + N L+ LP +IG +L  L  L ++ N+I  +   ++   +L  L    N L+
Sbjct: 132 NLRELWMDNNALQTLPGSIG-KLKMLVYLDMSKNRIETIDMEISGCEALEDLLLSSNMLQ 190

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
            LP+ +  L  L  L +  N   L  LP +IG L  L E D S N++ +LP +IG L  L
Sbjct: 191 HLPDSIGLLKKLTTLKVDDN--QLTLLPNAIGNLSLLEEFDCSCNELESLPSTIGYLHSL 248

Query: 178 QKLSLEGNPLVSPPMDV 194
           + L+++ N L   P ++
Sbjct: 249 RTLAVDENFLPELPREI 265



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 7/148 (4%)

Query: 51  KTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD 110
           K + NC++L +L+   N L  LP +I   L+NLK L I+ N +   P+++     L +++
Sbjct: 6   KQLFNCQALRKLSIPDNDLSNLPTSIA-SLVNLKELDISKNGVQEFPENIKCCKCLTIIE 64

Query: 111 ARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLM----SLVELDVSYNKITT 166
           A +N +  LP+    L+NL  L +  N  +LE LP + G  M     L  LD+  N+   
Sbjct: 65  ASVNPISKLPDGFTQLLNLTQLYL--NDAFLEFLPANFGRSMHKLAQLERLDLGNNEFNE 122

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           LP+ +  ++ L++L ++ N L + P  +
Sbjct: 123 LPEVLDQIQNLRELWMDNNALQTLPGSI 150



 Score = 41.6 bits (96), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 38/61 (62%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP  IG + KL+VL++S N L++LP +    + L  L  + N+ + 
Sbjct: 270 NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKA 329

Query: 72  L 72
           L
Sbjct: 330 L 330


>gi|223459922|gb|AAI38451.1| Lrrc7 protein [Mus musculus]
          Length = 1398

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 108/184 (58%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP SIG L  L  LD+S N +E++   I  C +LE+
Sbjct: 204 LPEVLD-QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALED 262

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+QLPD+IG  L  L TL ++ N++ +LP ++ +L+ L   D   N L+SLP 
Sbjct: 263 LLLSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPP 321

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L + +NF  L  LP  IG   ++  + +  NK+  LP+ IG +++L+ L+
Sbjct: 322 TIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLN 379

Query: 182 LEGN 185
           L  N
Sbjct: 380 LSDN 383



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 108/233 (46%), Gaps = 50/233 (21%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  LK LD+S N ++  P+ I+ C+ L 
Sbjct: 64  EELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLT 123

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   L  LR+L+ R N LK+L
Sbjct: 124 IIEASVNPISKLPD--GFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTL 181

Query: 120 PEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELD 158
           P+ +  L  LE L++  N                        L+ LP SIG L  LV LD
Sbjct: 182 PKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD 241

Query: 159 VSYNKITT-----------------------LPDSIGCLRKLQKLSLEGNPLV 188
           +S N+I T                       LPDSIG L+KL  L ++ N L 
Sbjct: 242 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLT 294



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP+SIG L KL  L V  N L  LP TI N   LEE + + N+L  LP TIG+ 
Sbjct: 267 SNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGY- 325

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+TL+++ N +  LP+ +    ++ V+  R N L+ LPE++  +  L VLN+S N  
Sbjct: 326 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDN-- 383

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+ LP+S   L  L  L +S N+   L
Sbjct: 384 RLKNLPFSFTKLKELAALWLSDNQSKAL 411



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 69  LRQLP-DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P +   FE   L+ L ++ N+I  LP+ L +  +LR L    N L SLP  + +L+
Sbjct: 39  LQQVPKEVFNFERT-LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLV 97

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           NL+ L+IS+N   ++  P +I     L  ++ S N I+ LPD    L  L +L L
Sbjct: 98  NLKELDISKNG--VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYL 150



 Score = 40.4 bits (93), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 38/61 (62%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP  IG + +L+VL++S N L++LP +    + L  L  + N+ + 
Sbjct: 351 NVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKA 410

Query: 72  L 72
           L
Sbjct: 411 L 411


>gi|323452120|gb|EGB07995.1| hypothetical protein AURANDRAFT_12986 [Aureococcus anophagefferens]
          Length = 171

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/153 (43%), Positives = 86/153 (56%), Gaps = 3/153 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  N L  LP+SIG LS+LKVL+  GN L++LP++I    SLE L    N L  LP++
Sbjct: 22  LDLSYNLLASLPDSIGALSELKVLEARGNRLQTLPESIAGLASLERLELASNDLSALPES 81

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L  L TL ++ N++   P SL  L SL    A  N L  LP     L +LE L++ 
Sbjct: 82  IG-DLAALATLVLDMNELTSFPDSLGDLASLETPSAIENGLVELPGSFGGLASLETLDLK 140

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
            N   LE LP S   L SL  LD+S N +  LP
Sbjct: 141 YN--ALERLPPSFAELASLRYLDLSANDLAALP 171



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/174 (38%), Positives = 93/174 (53%), Gaps = 3/174 (1%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           V    L+ LP S G L  L+ LD+S NLL SLP +I     L+ L A  N+L+ LP++I 
Sbjct: 1   VTRAALEALPESCGGLDALEYLDLSYNLLASLPDSIGALSELKVLEARGNRLQTLPESIA 60

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
             L +L+ L +  N +  LP+S+  L +L  L   +N L S P+ L +L +LE  +  +N
Sbjct: 61  -GLASLERLELASNDLSALPESIGDLAALATLVLDMNELTSFPDSLGDLASLETPSAIEN 119

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
              L  LP S G L SL  LD+ YN +  LP S   L  L+ L L  N L + P
Sbjct: 120 G--LVELPGSFGGLASLETLDLKYNALERLPPSFAELASLRYLDLSANDLAALP 171



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 80/136 (58%), Gaps = 2/136 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+S+ A L  + VL+   N+L+ LP SI  L+ L+ L+++ N L +LP++I +  +L  
Sbjct: 32  LPDSIGA-LSELKVLEARGNRLQTLPESIAGLASLERLELASNDLSALPESIGDLAALAT 90

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+L   PD++G +L +L+T S   N +V LP S   L SL  LD + N L+ LP 
Sbjct: 91  LVLDMNELTSFPDSLG-DLASLETPSAIENGLVELPGSFGGLASLETLDLKYNALERLPP 149

Query: 122 DLENLINLEVLNISQN 137
               L +L  L++S N
Sbjct: 150 SFAELASLRYLDLSAN 165



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 2/80 (2%)

Query: 115 CLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCL 174
            L++LPE    L  LE L++S N   L +LP SIG L  L  L+   N++ TLP+SI  L
Sbjct: 5   ALEALPESCGGLDALEYLDLSYNL--LASLPDSIGALSELKVLEARGNRLQTLPESIAGL 62

Query: 175 RKLQKLSLEGNPLVSPPMDV 194
             L++L L  N L + P  +
Sbjct: 63  ASLERLELASNDLSALPESI 82



 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 6/92 (6%)

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLS 200
           LE LP S G L +L  LD+SYN + +LPDSIG L +L+ L   GN L + P  +   GL+
Sbjct: 6   LEALPESCGGLDALEYLDLSYNLLASLPDSIGALSELKVLEARGNRLQTLPESIA--GLA 63

Query: 201 AVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTF 232
           +++    E  +ND  +  +   +G L    T 
Sbjct: 64  SLERL--ELASNDLSALPES--IGDLAALATL 91


>gi|417781513|ref|ZP_12429262.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410778244|gb|EKR62873.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 348

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/186 (40%), Positives = 107/186 (57%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  LD++ N+LK LPN IG L  LK L++SGN L  LP +I   ++LE L    N+
Sbjct: 84  QLQNLATLDLYENKLKVLPNEIGKLENLKELNLSGNQLTVLPPSIGQLQNLEILELFRNQ 143

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP+ I   L +L+ L++  N+I  LP+ ++ L++L  LD   N +K L  D + L N
Sbjct: 144 LATLPEEI-VGLKSLQILNLFENEIKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQN 202

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ LN+  N   LE  P  I  L SL  L+++YN+   LP+ I  L  LQ L L GN L 
Sbjct: 203 LKSLNLLDN--KLENFPADIVQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLT 260

Query: 189 SPPMDV 194
           S P  +
Sbjct: 261 SLPEGI 266



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 113/185 (61%), Gaps = 3/185 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L +  N+L  +P  IG L  L+ L ++ N+L+++P  IE  ++L  L+   NKL+ 
Sbjct: 41  NLEKLILFGNRLTAIPKEIGKLRNLETLILAENILKTIPNEIEQLQNLATLDLYENKLKV 100

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ IG +L NLK L+++ N++ +LP S+  L +L +L+   N L +LPE++  L +L++
Sbjct: 101 LPNEIG-KLENLKELNLSGNQLTVLPPSIGQLQNLEILELFRNQLATLPEEIVGLKSLQI 159

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LN+ +N   +++LP  I  L +L+ LD+  NKI  L      L+ L+ L+L  N L + P
Sbjct: 160 LNLFEN--EIKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENFP 217

Query: 192 MDVVE 196
            D+V+
Sbjct: 218 ADIVQ 222



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 113/195 (57%), Gaps = 6/195 (3%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+  +L N+ +L++  NQL  LP  I  L  L++L++  N ++SLPK I    +L 
Sbjct: 123 VLPPSI-GQLQNLEILELFRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEISQLSNLI 181

Query: 61  ELNANFNKLRQLPDTIGFE-LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            L+   NK+++L  ++ F+ L NLK+L++  NK+   P  +  L SL  L+   N  K L
Sbjct: 182 WLDLGKNKIKRL--SLDFKRLQNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYNRFKIL 239

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++  L NL+VL ++ N   L +LP  IG L  L  L +  N++TTLP  I  LR L+ 
Sbjct: 240 PEEILQLENLQVLELTGN--QLTSLPEGIGRLEKLESLFLEGNRLTTLPKGIEHLRSLKI 297

Query: 180 LSLEGNPLVSPPMDV 194
           + LE N L + P ++
Sbjct: 298 VHLEQNRLTAIPEEI 312



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/177 (38%), Positives = 103/177 (58%), Gaps = 7/177 (3%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           +H+N  K L N     S++++LDVS   LE+LP+ I   ++LE+L    N+L  +P  IG
Sbjct: 5   IHNNLEKSLQNP----SEVRILDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEIG 60

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
            +L NL+TL +  N +  +P  +  L +L  LD   N LK LP ++  L NL+ LN+S N
Sbjct: 61  -KLRNLETLILAENILKTIPNEIEQLQNLATLDLYENKLKVLPNEIGKLENLKELNLSGN 119

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
              L  LP SIG L +L  L++  N++ TLP+ I  L+ LQ L+L  N + S P ++
Sbjct: 120 --QLTVLPPSIGQLQNLEILELFRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEI 174



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 82/153 (53%), Gaps = 23/153 (15%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++L N++ LD+  N++K L      L  LK L++  N LE+ P  I   +SLE LN N+N
Sbjct: 175 SQLSNLIWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYN 234

Query: 68  KLRQLPDTI------------GFELINL----------KTLSINCNKIVILPQSLTHLTS 105
           + + LP+ I            G +L +L          ++L +  N++  LP+ + HL S
Sbjct: 235 RFKILPEEILQLENLQVLELTGNQLTSLPEGIGRLEKLESLFLEGNRLTTLPKGIEHLRS 294

Query: 106 LRVLDARLNCLKSLPEDLENLINLEVLNISQNF 138
           L+++    N L ++PE++ +L NL+ L + Q+F
Sbjct: 295 LKIVHLEQNRLTAIPEEIGSLQNLKELYL-QDF 326



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 55/86 (63%), Gaps = 2/86 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++PE +  +L N+ VL++  NQL  LP  IG L KL+ L + GN L +LPK IE+ RSL+
Sbjct: 238 ILPEEI-LQLENLQVLELTGNQLTSLPEGIGRLEKLESLFLEGNRLTTLPKGIEHLRSLK 296

Query: 61  ELNANFNKLRQLPDTIGFELINLKTL 86
            ++   N+L  +P+ IG  L NLK L
Sbjct: 297 IVHLEQNRLTAIPEEIG-SLQNLKEL 321


>gi|418723939|ref|ZP_13282773.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|421120177|ref|ZP_15580491.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|409962737|gb|EKO26471.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|410347263|gb|EKO98182.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|456825272|gb|EMF73668.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 288

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/181 (40%), Positives = 107/181 (59%), Gaps = 6/181 (3%)

Query: 12  NVVVLDVHSNQ---LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +V+VL+   N+   LK LP  IG L  LK L +S N + +LP  I N ++L+ L+ N N+
Sbjct: 48  DVLVLNYRDNEENPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNR 107

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  +P  IG  L NLK LSI  NK+  LP+ + +L +L+ L    N LK LP+++ NL  
Sbjct: 108 LETIPKEIG-NLKNLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRK 166

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ +++S N   L  LP  I  L SL+E+ +  N+ TTLP  IG L+ L+ L L  N L+
Sbjct: 167 LQRIHLSTN--ELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLI 224

Query: 189 S 189
           S
Sbjct: 225 S 225



 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 110/188 (58%), Gaps = 3/188 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L + +N++  LP  IG L  L+VL ++GN LE++PK I N ++L+EL+  +N
Sbjct: 70  GNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWN 129

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL+ LP  IG  L NLK L ++ N++ ILPQ + +L  L+ +    N L  LP++++NL 
Sbjct: 130 KLQTLPKEIG-NLKNLKELYLSRNQLKILPQEIGNLRKLQRIHLSTNELTKLPQEIKNLE 188

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  + +  N     TLP  IG L +L  L +  N++ +L   IG L+ L++L LE N L
Sbjct: 189 SLLEIYLYDN--QFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELYLEENQL 246

Query: 188 VSPPMDVV 195
              P  + 
Sbjct: 247 TMLPKQIA 254



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 112/190 (58%), Gaps = 3/190 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+ VL ++ N+L+ +P  IG L  LK L +  N L++LPK I N ++L+EL  + N
Sbjct: 93  GNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTLPKEIGNLKNLKELYLSRN 152

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG  L  L+ + ++ N++  LPQ + +L SL  +    N   +LP+++ NL 
Sbjct: 153 QLKILPQEIG-NLRKLQRIHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLK 211

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L + +N Q +  LP  IG L +L EL +  N++T LP  I  L++L +LSL+GN  
Sbjct: 212 NLRNLVLGRN-QLISLLP-EIGNLKNLKELYLEENQLTMLPKQIAALKQLARLSLKGNQF 269

Query: 188 VSPPMDVVEQ 197
            S   + +++
Sbjct: 270 PSEEKERIQR 279



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 2/85 (2%)

Query: 110 DARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPD 169
           D   N LK+LP+++ NL NL+ L +S N   + TLP  IG L +L  L ++ N++ T+P 
Sbjct: 56  DNEENPLKTLPKEIGNLQNLKELYLSAN--EITTLPPEIGNLKNLQVLSLNGNRLETIPK 113

Query: 170 SIGCLRKLQKLSLEGNPLVSPPMDV 194
            IG L+ L++LS+E N L + P ++
Sbjct: 114 EIGNLKNLKELSIEWNKLQTLPKEI 138



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 1/78 (1%)

Query: 118 SLPEDLENLINLEVLNISQNFQY-LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
            L E  +N  ++ VLN   N +  L+TLP  IG L +L EL +S N+ITTLP  IG L+ 
Sbjct: 38  DLEEAFKNPKDVLVLNYRDNEENPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKN 97

Query: 177 LQKLSLEGNPLVSPPMDV 194
           LQ LSL GN L + P ++
Sbjct: 98  LQVLSLNGNRLETIPKEI 115


>gi|418670524|ref|ZP_13231895.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|418725048|ref|ZP_13283724.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|418729740|ref|ZP_13288287.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|421121420|ref|ZP_15581717.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|409961430|gb|EKO25175.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|410345854|gb|EKO96924.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410753906|gb|EKR15564.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410775918|gb|EKR55909.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 423

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 107/198 (54%), Gaps = 27/198 (13%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNAN---------- 65
           LD+ SN+LK +P  I  L  LKVL ++GN L SLPK IE  ++L+ LN            
Sbjct: 207 LDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVE 266

Query: 66  -------------FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDAR 112
                        +N+L + P  +G +L +LK LS+  N+I  LP  +T L  L+ L   
Sbjct: 267 ILELKNLLELNLYYNQLVEFPKEVG-QLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLS 325

Query: 113 LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
            N +  LP+++  L NLE L++S N   L  LP  IG L  L  L++  N++TTLP  I 
Sbjct: 326 GNKITILPKEILQLKNLEWLSLSNN--KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIE 383

Query: 173 CLRKLQKLSLEGNPLVSP 190
            L+ LQ+L L+ NP +SP
Sbjct: 384 QLKNLQRLELDSNP-ISP 400



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 107/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  N+   L   I  L  L+ L+++ N L  LPK I   ++L+EL+ + N
Sbjct: 61  GQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSN 120

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +  NL+ L+++ NK+ +LP+ +  L +L+ L    N L SLP ++E L 
Sbjct: 121 ELVNLPKEIG-QFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLK 179

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L+++ N     T+   + LL +L  LD+  NK+ T+P  I  L+ L+ L L GN L
Sbjct: 180 SLKNLDLNHN--EFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQL 237

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 238 TSLPKEI 244



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/183 (37%), Positives = 103/183 (56%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V  LD+    LK L N IG L  L+ LD+ GN    L K I   + L++LN N NKL  
Sbjct: 42  DVRNLDLSFLGLKTLTNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTV 101

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ LS++ N++V LP+ +    +L+ L+   N L  LP+++  L NL+ 
Sbjct: 102 LPKEIG-QLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQE 160

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L++  N   L +LP  I  L SL  LD+++N+ TT+   +  L  L+ L L  N L + P
Sbjct: 161 LSLLSN--KLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIP 218

Query: 192 MDV 194
            ++
Sbjct: 219 KEI 221



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 105/179 (58%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L++++N+L  LP  IG L  L+ L +  N L +LPK I   ++L++LN + NKL  LP  
Sbjct: 92  LNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKE 151

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL+ LS+  NK++ LP  +  L SL+ LD   N   ++ +++  L  LE L++ 
Sbjct: 152 IG-QLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLR 210

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L+T+P  I  L SL  L ++ N++T+LP  I  L+ L+ L+L  N     P+++
Sbjct: 211 SN--KLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEI 267



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 1/103 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++  L ++ NQ+  LP  +  L  L+ L +SGN +  LPK I   ++LE L+ + N
Sbjct: 291 GQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNN 350

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD 110
           KL  LP  IG +L  L+ L +  N++  LP+ +  L +L+ L+
Sbjct: 351 KLNALPKEIG-QLKKLQRLELGNNQLTTLPKEIEQLKNLQRLE 392


>gi|405965662|gb|EKC31024.1| Protein lap4 [Crassostrea gigas]
          Length = 1780

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/196 (37%), Positives = 108/196 (55%), Gaps = 8/196 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A L+N++ +D+  N +  +P +I  L  L+VLD+S N L  LP+     R+L  L  N  
Sbjct: 80  ANLVNLMEMDISRNDIGDIPENIKFLKNLQVLDISSNPLTKLPEGFTQLRNLTHLGLNDI 139

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L +LP  IG  L NL +L +  N I  LPQS++ L  L +LD   N +K LPE + +L 
Sbjct: 140 SLMRLPPDIG-SLTNLVSLELRENMIQFLPQSMSLLVKLEILDLGSNNIKELPEIIGSLP 198

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L +  N   L+ LP  IG L  L ++DVS N++T +PD I  L+ L  L L  N L
Sbjct: 199 SLQELWLDCN--ELQDLPPEIGNLRKLTQIDVSENQLTYIPDEICGLQNLTDLCLSQNDL 256

Query: 188 VSPPMDVVEQGLSAVK 203
              P     +G+ ++K
Sbjct: 257 EDIP-----EGIGSLK 267



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/185 (34%), Positives = 105/185 (56%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N ++ LP S+  L KL++LD+  N ++ LP+ I +  SL+EL  + N+L
Sbjct: 151 LTNLVSLELRENMIQFLPQSMSLLVKLEILDLGSNNIKELPEIIGSLPSLQELWLDCNEL 210

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           + LP  IG  L  L  + ++ N++  +P  +  L +L  L    N L+ +PE + +L  L
Sbjct: 211 QDLPPEIG-NLRKLTQIDVSENQLTYIPDEICGLQNLTDLCLSQNDLEDIPEGIGSLKKL 269

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
            +L + QN   L  LP  IG   SL EL ++ N +  LP +IG LR L  L+++ N L  
Sbjct: 270 SILKLDQN--KLGFLPQEIGNCESLTELILTENYLEELPSTIGRLRLLSNLNVDRNQLKE 327

Query: 190 PPMDV 194
            P+++
Sbjct: 328 IPVEI 332



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 108/194 (55%), Gaps = 4/194 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +P+S++  L+ + +LD+ SN +K LP  IG L  L+ L +  N L+ LP  I N R L 
Sbjct: 166 FLPQSMSL-LVKLEILDLGSNNIKELPEIIGSLPSLQELWLDCNELQDLPPEIGNLRKLT 224

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +++ + N+L  +PD I   L NL  L ++ N +  +P+ +  L  L +L    N L  LP
Sbjct: 225 QIDVSENQLTYIPDEI-CGLQNLTDLCLSQNDLEDIPEGIGSLKKLSILKLDQNKLGFLP 283

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++ N  +L  L +++N  YLE LP +IG L  L  L+V  N++  +P  IG   +L  +
Sbjct: 284 QEIGNCESLTELILTEN--YLEELPSTIGRLRLLSNLNVDRNQLKEIPVEIGQCVRLNVV 341

Query: 181 SLEGNPLVSPPMDV 194
           SL  N L+  P ++
Sbjct: 342 SLRDNRLLRLPQEL 355



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 101/187 (54%), Gaps = 5/187 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            R L  ++LD  +NQLK LP     L +L+ L +S N +  LP  + N  +L E++ + N
Sbjct: 36  TRSLEELLLD--ANQLKDLPKGFFRLVQLRKLSLSDNEIARLPPEVANLVNLMEMDISRN 93

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            +  +P+ I F L NL+ L I+ N +  LP+  T L +L  L      L  LP D+ +L 
Sbjct: 94  DIGDIPENIKF-LKNLQVLDISSNPLTKLPEGFTQLRNLTHLGLNDISLMRLPPDIGSLT 152

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L + +N   ++ LP S+ LL+ L  LD+  N I  LP+ IG L  LQ+L L+ N L
Sbjct: 153 NLVSLELRENM--IQFLPQSMSLLVKLEILDLGSNNIKELPEIIGSLPSLQELWLDCNEL 210

Query: 188 VSPPMDV 194
              P ++
Sbjct: 211 QDLPPEI 217



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 91/185 (49%), Gaps = 23/185 (12%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
            KC+P    C  ++  +D     L  +P  +    RSLEEL  + N+L+ LP    F L+
Sbjct: 2   FKCIPLFKACNRQVDYIDRRHCSLTDVPDDVLRYTRSLEELLLDANQLKDLPKGF-FRLV 60

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN---- 137
            L+ LS++ N+I  LP  + +L +L  +D   N +  +PE+++ L NL+VL+IS N    
Sbjct: 61  QLRKLSLSDNEIARLPPEVANLVNLMEMDISRNDIGDIPENIKFLKNLQVLDISSNPLTK 120

Query: 138 ----FQYLET-------------LPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
               F  L               LP  IG L +LV L++  N I  LP S+  L KL+ L
Sbjct: 121 LPEGFTQLRNLTHLGLNDISLMRLPPDIGSLTNLVSLELRENMIQFLPQSMSLLVKLEIL 180

Query: 181 SLEGN 185
            L  N
Sbjct: 181 DLGSN 185



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 77/136 (56%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE + + L  + +L +  N+L  LP  IG    L  L ++ N LE LP TI   R L  
Sbjct: 259 IPEGIGS-LKKLSILKLDQNKLGFLPQEIGNCESLTELILTENYLEELPSTIGRLRLLSN 317

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N+L+++P  IG + + L  +S+  N+++ LPQ L +L  L VLD   N L+ LP 
Sbjct: 318 LNVDRNQLKEIPVEIG-QCVRLNVVSLRDNRLLRLPQELGNLKELHVLDVSGNKLEYLPI 376

Query: 122 DLENLINLEVLNISQN 137
            + NL +L  L +S+N
Sbjct: 377 TITNL-HLNALWLSEN 391


>gi|344272593|ref|XP_003408116.1| PREDICTED: protein LAP2 [Loxodonta africana]
          Length = 1304

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 112/191 (58%), Gaps = 8/191 (4%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  L
Sbjct: 217 NRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIG-SL 275

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  LTS+  LD   N +++LP  +  L N+       N  Y
Sbjct: 276 KNVTTLKIDENQLMYLPDSVGGLTSVEELDCSFNEVEALPSSIGQLTNIRTFAADHN--Y 333

Query: 141 LETLPY--SIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-Q 197
           L+ LP   +IG   ++  L +  NK+ TLP+ +G ++KL+ ++L  N L + P    + Q
Sbjct: 334 LQQLPTRGTIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQ 393

Query: 198 GLSAVKGYLSE 208
            L+A+  +LS+
Sbjct: 394 QLTAM--WLSD 402



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 106/187 (56%), Gaps = 10/187 (5%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L  + A+ N + +LPD 
Sbjct: 74  LSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPD- 132

Query: 76  IGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            GF +L+NL  L +N   +  LP +   LT L++L+ R N LK LP+ +  L  LE L++
Sbjct: 133 -GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDL 191

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             N ++ E +P  +  L  L E  +  N++T +P  IG L++L  L +  N +     ++
Sbjct: 192 GSN-EFTE-VPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNI-----EM 244

Query: 195 VEQGLSA 201
           VE+G+SA
Sbjct: 245 VEEGISA 251



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 26/207 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP S+G L S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSVGGLTSVEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPP 191
             LP SIG L  ++  + + N L   P
Sbjct: 312 EALPSSIGQLTNIRTFAADHNYLQQLP 338



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 95/165 (57%), Gaps = 6/165 (3%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+ E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP ++    S+E
Sbjct: 244 MVEEGISA-CENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSVGGLTSVE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ--SLTHLTSLRVLDARLNCLKS 118
           EL+ +FN++  LP +IG +L N++T + + N +  LP   ++    ++ VL    N L++
Sbjct: 303 ELDCSFNEVEALPSSIG-QLTNIRTFAADHNYLQQLPTRGTIGSWKNITVLFLHSNKLET 361

Query: 119 LPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           LPE++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 LPEEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 404


>gi|455790935|gb|EMF42777.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 423

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 107/198 (54%), Gaps = 27/198 (13%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNAN---------- 65
           LD+ SN+LK +P  I  L  LKVL ++GN L SLPK IE  ++L+ LN            
Sbjct: 207 LDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVE 266

Query: 66  -------------FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDAR 112
                        +N+L + P  +G +L +LK LS+  N+I  LP  +T L  L+ L   
Sbjct: 267 ILELKNLLELNLYYNQLVEFPKEVG-QLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLS 325

Query: 113 LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
            N +  LP+++  L NLE L++S N   L  LP  IG L  L  L++  N++TTLP  I 
Sbjct: 326 GNKITILPKEILQLKNLEWLSLSNN--KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIE 383

Query: 173 CLRKLQKLSLEGNPLVSP 190
            L+ LQ+L L+ NP +SP
Sbjct: 384 QLKNLQRLELDSNP-ISP 400



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 102/179 (56%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+    LK LPN IG L  L+ LD+ GN    L K I   + L++LN N NKL  LP  
Sbjct: 46  LDLSFLGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKE 105

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL+ LS++ N++V LP+ +    +L+ L+   N L  LP+++  L NL+ L++ 
Sbjct: 106 IG-QLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLL 164

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L +LP  I  L SL  LD+++N+ TT+   +  L  L+ L L  N L + P ++
Sbjct: 165 SN--KLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEI 221



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 107/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  N+   L   I  L  L+ L+++ N L  LPK I   ++L+EL+ + N
Sbjct: 61  GQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSN 120

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +  NL+ L+++ NK+ +LP+ +  L +L+ L    N L SLP ++E L 
Sbjct: 121 ELVNLPKEIG-QFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLK 179

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L+++ N     T+   + LL +L  LD+  NK+ T+P  I  L+ L+ L L GN L
Sbjct: 180 SLKNLDLNHN--EFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQL 237

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 238 TSLPKEI 244



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 105/179 (58%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L++++N+L  LP  IG L  L+ L +  N L +LPK I   ++L++LN + NKL  LP  
Sbjct: 92  LNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKE 151

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL+ LS+  NK++ LP  +  L SL+ LD   N   ++ +++  L  LE L++ 
Sbjct: 152 IG-QLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLR 210

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L+T+P  I  L SL  L ++ N++T+LP  I  L+ L+ L+L  N     P+++
Sbjct: 211 SN--KLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEI 267



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 26/148 (17%)

Query: 47  ESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSL 106
           ++L K ++N   +  L+ +F  L+ LP+ IG +L NL+ L +  N+  IL + +  L   
Sbjct: 31  KNLEKALQNPADVRNLDLSFLGLKTLPNKIG-QLKNLQKLDLGGNEPTILSKEIWQLK-- 87

Query: 107 RVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITT 166
                                +L+ LN++ N   L  LP  IG L +L EL +  N++  
Sbjct: 88  ---------------------DLQKLNLNNN--KLTVLPKEIGQLQNLQELSLHSNELVN 124

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           LP  IG  + LQKL+L+ N L   P ++
Sbjct: 125 LPKEIGQFKNLQKLNLDNNKLTVLPKEI 152



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 1/104 (0%)

Query: 7   TARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANF 66
             +L ++  L ++ NQ+  LP  +  L  L+ L +SGN +  LPK I   ++LE L+ + 
Sbjct: 290 VGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSN 349

Query: 67  NKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD 110
           NKL  LP  IG +L  L+ L +  N++  LP+ +  L +L+ L+
Sbjct: 350 NKLNALPKEIG-QLKKLQRLELGNNQLTTLPKEIEQLKNLQRLE 392


>gi|110825984|ref|NP_004216.2| malignant fibrous histiocytoma-amplified sequence 1 [Homo sapiens]
 gi|296437367|sp|Q9Y4C4.2|MFHA1_HUMAN RecName: Full=Malignant fibrous histiocytoma-amplified sequence 1;
           AltName: Full=Malignant fibrous histiocytoma-amplified
           sequence with leucine-rich tandem repeats 1
 gi|189442857|gb|AAI67810.1| Malignant fibrous histiocytoma amplified sequence 1 [synthetic
           construct]
          Length = 1052

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 118/250 (47%), Gaps = 44/250 (17%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P  L A L ++  LDV  N+L  LP+S+ CLS+L+ LDV  N L + P+ +    +LEE
Sbjct: 150 LPAQLGA-LAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEE 208

Query: 62  LNANFNKLRQLPDTI---------------------GF-ELINLKTLSINCNKIVILPQS 99
           L+ + N+LR LP+ I                     GF EL +L++L ++ N +  LP  
Sbjct: 209 LDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQ 268

Query: 100 LTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNF--------------------- 138
            + L  L++L+   N  +  P  L  L  LE L +S+N                      
Sbjct: 269 FSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDN 328

Query: 139 QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQG 198
             +  LP SI  L  L EL +  N+I  LPD  G L ++    ++ NPL+ PP +V  +G
Sbjct: 329 NRIRYLPDSIVELTGLEELVLQGNQIAVLPDHFGQLSRVGLWKIKDNPLIQPPYEVCMKG 388

Query: 199 LSAVKGYLSE 208
           +  +  Y  E
Sbjct: 389 IPYIAAYQKE 398



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 4/171 (2%)

Query: 16  LDVHSNQLKCL-PNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           LDV  N+L  L    +  L +L+ L++S N L +LP  +     LEEL+ +FN+L  LPD
Sbjct: 116 LDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPD 175

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
           ++   L  L+TL ++ N++   P+ L  L +L  LD   N L+ LPED+  L  L++L +
Sbjct: 176 SLSC-LSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWL 234

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           S     L TLP     L SL  L +  N +  LP    CL++L+ L+L  N
Sbjct: 235 SG--AELGTLPAGFCELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSSN 283



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 52/146 (35%), Positives = 79/146 (54%), Gaps = 8/146 (5%)

Query: 55  NCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLT----HLTSLRVLD 110
           N   +E LN   N L ++P+ +G  L +L+ L +  N+   LP ++     HLT L V  
Sbjct: 61  NLGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSH 120

Query: 111 ARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDS 170
            RL  L +  E +  L  L  LN+S N   L  LP  +G L  L ELDVS+N++  LPDS
Sbjct: 121 NRLTALGA--EVVSALRELRKLNLSHN--QLPALPAQLGALAHLEELDVSFNRLAHLPDS 176

Query: 171 IGCLRKLQKLSLEGNPLVSPPMDVVE 196
           + CL +L+ L ++ N L + P  +++
Sbjct: 177 LSCLSRLRTLDVDHNQLTAFPRQLLQ 202


>gi|456824532|gb|EMF72958.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 423

 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 107/198 (54%), Gaps = 27/198 (13%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNAN---------- 65
           LD+ SN+LK +P  I  L  LKVL ++GN L SLPK IE  ++L+ LN            
Sbjct: 207 LDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVE 266

Query: 66  -------------FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDAR 112
                        +N+L + P  +G +L +LK LS+  N+I  LP  +T L  L+ L   
Sbjct: 267 ILELKNLLELNLYYNQLVEFPKEVG-QLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLS 325

Query: 113 LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
            N +  LP+++  L NLE L++S N   L  LP  IG L  L  L++  N++TTLP  I 
Sbjct: 326 GNKITILPKEILQLKNLEWLSLSNN--KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIE 383

Query: 173 CLRKLQKLSLEGNPLVSP 190
            L+ LQ+L L+ NP +SP
Sbjct: 384 QLKNLQRLELDSNP-ISP 400



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 103/179 (57%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+    LK LPN IG L  L+ LD+ GN    L K I   + L++LN N NKL  LP  
Sbjct: 46  LDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKE 105

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL+ LS++ N++V LP+ +    +L+ L+   N L  LP+++  L NL+ L++ 
Sbjct: 106 IG-QLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLL 164

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L +LP  I  L SL  LD+++N++TT+   +  L  L+ L L  N L + P ++
Sbjct: 165 SN--KLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKEI 221



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  N+   L   I  L  L+ L+++ N L  LPK I   ++L+EL+ + N
Sbjct: 61  GQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSN 120

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +  NL+ L+++ NK+ +LP+ +  L +L+ L    N L SLP ++E L 
Sbjct: 121 ELVNLPKEIG-QFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLK 179

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L+++ N   L T+   + LL +L  LD+  NK+ T+P  I  L+ L+ L L GN L
Sbjct: 180 SLKNLDLNHN--ELTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQL 237

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 238 TSLPKEI 244



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 106/179 (59%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L++++N+L  LP  IG L  L+ L +  N L +LPK I   ++L++LN + NKL  LP  
Sbjct: 92  LNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKE 151

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL+ LS+  NK++ LP  +  L SL+ LD   N L ++ +++  L  LE L++ 
Sbjct: 152 IG-QLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLR 210

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L+T+P  I  L SL  L ++ N++T+LP  I  L+ L+ L+L  N     P+++
Sbjct: 211 SN--KLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEI 267



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 96/172 (55%), Gaps = 3/172 (1%)

Query: 24  KCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINL 83
           K L  ++   + ++ LD+S   L++LP  I   ++L++L+   N+   L   I ++L +L
Sbjct: 31  KNLAKALQNPADIRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEI-WQLKDL 89

Query: 84  KTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLET 143
           + L++N NK+ +LP+ +  L +L+ L    N L +LP+++    NL+ LN+  N   L  
Sbjct: 90  QKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNN--KLTV 147

Query: 144 LPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
           LP  IG L +L EL +  NK+ +LP  I  L+ L+ L L  N L +   +V+
Sbjct: 148 LPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVM 199



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 1/103 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++  L ++ NQ+  LP  +  L  L+ L +SGN +  LPK I   ++LE L+ + N
Sbjct: 291 GQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNN 350

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD 110
           KL  LP  IG +L  L+ L +  N++  LP+ +  L +L+ L+
Sbjct: 351 KLNALPKEIG-QLKKLQRLELGNNQLTTLPKEIEQLKNLQRLE 392


>gi|417763688|ref|ZP_12411665.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417773732|ref|ZP_12421607.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418674971|ref|ZP_13236266.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409940507|gb|EKN86147.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410576203|gb|EKQ39210.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410578033|gb|EKQ45899.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 288

 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/181 (40%), Positives = 107/181 (59%), Gaps = 6/181 (3%)

Query: 12  NVVVLDVHSNQ---LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +V+VL+   N+   LK LP  IG L  LK L +S N + +LP  I N ++L+ L+ N N+
Sbjct: 48  DVLVLNYRDNEENPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNR 107

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  +P  IG  L NLK LSI  NK+  LP+ + +L +L+ L    N LK LP+++ NL  
Sbjct: 108 LETIPKEIG-NLKNLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRK 166

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ +++S N   L  LP  I  L SL+E+ +  N+ TTLP  IG L+ L+ L L  N L+
Sbjct: 167 LQRIHLSTN--ELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLI 224

Query: 189 S 189
           S
Sbjct: 225 S 225



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 110/188 (58%), Gaps = 3/188 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L + +N++  LP  IG L  L+VL ++GN LE++PK I N ++L+EL+  +N
Sbjct: 70  GNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWN 129

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL+ LP  IG  L NLK L ++ N++ ILPQ + +L  L+ +    N L  LP++++NL 
Sbjct: 130 KLQTLPKEIG-NLKNLKELYLSRNQLKILPQEIGNLRKLQRIHLSTNELTKLPQEIKNLE 188

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  + +  N     TLP  IG L +L  L +  N++ +L   IG L+ L++L LE N L
Sbjct: 189 SLLEIYLYDN--QFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELYLEENQL 246

Query: 188 VSPPMDVV 195
              P  + 
Sbjct: 247 TMLPEQIA 254



 Score = 97.1 bits (240), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 113/190 (59%), Gaps = 3/190 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+ VL ++ N+L+ +P  IG L  LK L +  N L++LPK I N ++L+EL  + N
Sbjct: 93  GNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTLPKEIGNLKNLKELYLSRN 152

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L+ LP  IG  L  L+ + ++ N++  LPQ + +L SL  +    N   +LP+++ NL 
Sbjct: 153 QLKILPQEIG-NLRKLQRIHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLK 211

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L + +N Q +  LP  IG L +L EL +  N++T LP+ I  L++L +LSL+GN  
Sbjct: 212 NLRNLVLGRN-QLISLLP-EIGNLKNLKELYLEENQLTMLPEQIAALKQLARLSLKGNQF 269

Query: 188 VSPPMDVVEQ 197
            S   + +++
Sbjct: 270 PSEEKERIQR 279



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 2/85 (2%)

Query: 110 DARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPD 169
           D   N LK+LP+++ NL NL+ L +S N   + TLP  IG L +L  L ++ N++ T+P 
Sbjct: 56  DNEENPLKTLPKEIGNLQNLKELYLSAN--EITTLPPEIGNLKNLQVLSLNGNRLETIPK 113

Query: 170 SIGCLRKLQKLSLEGNPLVSPPMDV 194
            IG L+ L++LS+E N L + P ++
Sbjct: 114 EIGNLKNLKELSIEWNKLQTLPKEI 138



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 1/78 (1%)

Query: 118 SLPEDLENLINLEVLNISQNFQY-LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
            L E  +N  ++ VLN   N +  L+TLP  IG L +L EL +S N+ITTLP  IG L+ 
Sbjct: 38  DLEEAFKNPKDVLVLNYRDNEENPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKN 97

Query: 177 LQKLSLEGNPLVSPPMDV 194
           LQ LSL GN L + P ++
Sbjct: 98  LQVLSLNGNRLETIPKEI 115


>gi|260788688|ref|XP_002589381.1| hypothetical protein BRAFLDRAFT_77823 [Branchiostoma floridae]
 gi|229274558|gb|EEN45392.1| hypothetical protein BRAFLDRAFT_77823 [Branchiostoma floridae]
          Length = 1697

 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 112/229 (48%), Gaps = 26/229 (11%)

Query: 10   LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
            L N+ VL V +N+L   P  +  L KL+ L +  N L  +P  + +  +LE L+   N +
Sbjct: 1052 LPNLEVLSVGNNKLSTFPPGVEKLQKLRELYIRDNQLTEVPSGVCSLPNLEVLSVGKNPI 1111

Query: 70   RQLPDTIGFELINLKTLSI-NCN----------------------KIVILPQSLTHLTSL 106
            R+LPD +   L  LKTLS+ NC                       K  I+P  +  L  L
Sbjct: 1112 RRLPDYVT-RLARLKTLSVSNCQFAEFPRQVQQLKIMEELYAGGCKFDIVPDEVGSLQHL 1170

Query: 107  RVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITT 166
            +VL    N LK+LP  + +L NL  + +  N     T P  +  L ++ +LD+S N IT 
Sbjct: 1171 QVLALDKNLLKTLPSTMSHLHNLREVYLDDN--KFGTFPEVLCELPAMEKLDISKNNITR 1228

Query: 167  LPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHK 215
            LP ++    KL+ L + GNPL  PP DV +QG  A+  +L ++   D +
Sbjct: 1229 LPTALHRADKLKHLDVSGNPLTYPPQDVCKQGTGAIMAFLKQEAEKDER 1277



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 26/206 (12%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+ VL V  N ++ LP+ +  L++LK L V    L+  P+ +   ++LEEL A   K 
Sbjct: 311 LPNLEVLGVGKNPIRSLPDYVTRLARLKTLSVPNCQLDEFPRQVLQLKTLEELYAGGCKF 370

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             +PD +G  L +L  L+++ N +  LP +++HL +LR +    N   + PE L  L  +
Sbjct: 371 DIVPDEVG-SLQHLWYLALDKNLLKTLPSTMSHLHNLREVYLDDNKFGTFPEVLCELPAM 429

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           E                         +LD+S N IT LP ++    KL+ L + GNPL  
Sbjct: 430 E-------------------------KLDISKNNITRLPTALHRADKLKHLDVSGNPLTY 464

Query: 190 PPMDVVEQGLSAVKGYLSEKMNNDHK 215
           PP DV +QG  A+  +L ++   D +
Sbjct: 465 PPQDVCKQGTGAIMAFLKQEAEKDER 490



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 102/213 (47%), Gaps = 26/213 (12%)

Query: 3   PESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEEL 62
           P+++  RL     LD+ +  L  +P  +  ++ L+ LDVS N L S+P+ +   + L  L
Sbjct: 9   PQTVNGRL----KLDLSNQGLTSIPEEVFDITDLEFLDVSNNKLTSIPEAVGRLQKLYRL 64

Query: 63  NANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED 122
           +A++N L  LP  IG  L  L  L I  NK+  LP  +  L  L  L    N L   P  
Sbjct: 65  DADYNTLTSLPQAIG-SLQKLTHLYIYDNKLSTLPPGVEKLQKLTKLFIGNNQLTGFPSG 123

Query: 123 LENLINLEVLNISQN-----------FQYLETL----------PYSIGLLMSLVELDVSY 161
           + +L NLEVL +S N            Q L TL          P  + LL +L  L VS 
Sbjct: 124 VCSLPNLEVLEVSYNKLPNFPPVVEKLQKLRTLYINGNQLTEVPPGVCLLPNLEVLSVSN 183

Query: 162 NKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           NK++T P  +  L+KL++L + GN L   P  V
Sbjct: 184 NKLSTFPPGVEKLQKLRELYIYGNQLTEVPSGV 216



 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 96/186 (51%), Gaps = 13/186 (6%)

Query: 2    IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
            IPE +   + ++ VLDV +N+L  +P +IG L KL  LD  GN+L SLP+ I + + L  
Sbjct: 939  IPEEV-FDITDLEVLDVSNNKLTSIPEAIGRLQKLYRLDADGNMLTSLPQAIGSLQKLIH 997

Query: 62   LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
            L    N+L ++P  +   L NL+ L++  NK+   P  +  L  L  L     CL     
Sbjct: 998  LYIYDNQLTEVPSGV-CSLPNLEVLNVYNNKLSTFPPGVEKLQKLGTLYINGVCL----- 1051

Query: 122  DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
                L NLEVL++  N   L T P  +  L  L EL +  N++T +P  +  L  L+ LS
Sbjct: 1052 ----LPNLEVLSVGNN--KLSTFPPGVEKLQKLRELYIRDNQLTEVPSGVCSLPNLEVLS 1105

Query: 182  LEGNPL 187
            +  NP+
Sbjct: 1106 VGKNPI 1111



 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 98/227 (43%), Gaps = 47/227 (20%)

Query: 10  LLNVVVLDV-----------------------HSNQLKCLPNSIGCLSKLKVLDVSGNLL 46
           L N+ VL V                       + NQL  +P+ +  L  L+VL V  N L
Sbjct: 173 LPNLEVLSVSNNKLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLSVYNNNL 232

Query: 47  ESLPKTIENCRSLEELNANFNKLRQLPDTI----------------------GFELINLK 84
            + P  +E  + L EL    N+L ++P  +                      G +L  L+
Sbjct: 233 STFPPGVEKLQKLRELRIYGNQLTEVPPGVCLLPNIEWLSVSNNNLSTFPPGGEKLQKLR 292

Query: 85  TLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
            L IN N++  +P  +  L +L VL    N ++SLP+ +  L  L+ L++  N Q L+  
Sbjct: 293 ELYINDNQLTEVPSGVCSLPNLEVLGVGKNPIRSLPDYVTRLARLKTLSVP-NCQ-LDEF 350

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           P  +  L +L EL     K   +PD +G L+ L  L+L+ N L + P
Sbjct: 351 PRQVLQLKTLEELYAGGCKFDIVPDEVGSLQHLWYLALDKNLLKTLP 397



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 2/86 (2%)

Query: 109  LDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
            LD     L S+PE++ ++ +LEVL++S N   L ++P +IG L  L  LD   N +T+LP
Sbjct: 929  LDLSNQGLTSIPEEVFDITDLEVLDVSNN--KLTSIPEAIGRLQKLYRLDADGNMLTSLP 986

Query: 169  DSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +IG L+KL  L +  N L   P  V
Sbjct: 987  QAIGSLQKLIHLYIYDNQLTEVPSGV 1012



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 6/93 (6%)

Query: 108 VLDARLNCLKSLPEDLENLINLEVLNISQNF------QYLETLPYSIGLLMSLVELDVSY 161
           +L A ++ +K    ++   +NL+   ++         Q L ++P  +  +  L  LDVS 
Sbjct: 897 ILQAIIDVMKEKGSNMAAGLNLQPQTVNGRLKLDLSNQGLTSIPEEVFDITDLEVLDVSN 956

Query: 162 NKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           NK+T++P++IG L+KL +L  +GN L S P  +
Sbjct: 957 NKLTSIPEAIGRLQKLYRLDADGNMLTSLPQAI 989


>gi|418701530|ref|ZP_13262455.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759612|gb|EKR25824.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 423

 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 107/198 (54%), Gaps = 27/198 (13%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNAN---------- 65
           LD+ SN+LK +P  I  L  LKVL ++GN L SLPK IE  ++L+ LN            
Sbjct: 207 LDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVE 266

Query: 66  -------------FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDAR 112
                        +N+L + P  +G +L +LK LS+  N+I  LP  +T L  L+ L   
Sbjct: 267 ILELKNLLELNLYYNQLVEFPKEVG-QLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLS 325

Query: 113 LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
            N +  LP+++  L NLE L++S N   L  LP  IG L  L  L++  N++TTLP  I 
Sbjct: 326 GNKITILPKEILQLKNLEWLSLSNN--KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIE 383

Query: 173 CLRKLQKLSLEGNPLVSP 190
            L+ LQ+L L+ NP +SP
Sbjct: 384 QLKNLQRLELDSNP-ISP 400



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 100/179 (55%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+    LK L N IG L  L+ LD+ GN    L K I   + L++LN N NKL  LP  
Sbjct: 46  LDLSFLGLKTLTNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKE 105

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL+ LS++ N++V LP+ +    +L+ L+   N L  LP+++  L NL+ L++ 
Sbjct: 106 IG-QLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLL 164

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L +LP  I  L SL  LD++ N+ TT+   +  L  L+ L L  N L + P ++
Sbjct: 165 SN--KLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEI 221



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 105/179 (58%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L++++N+L  LP  IG L  L+ L +  N L +LPK I   ++L++LN + NKL  LP  
Sbjct: 92  LNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKE 151

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL+ LS+  NK++ LP  +  L SL+ LD   N   ++ +++  L  LE L++ 
Sbjct: 152 IG-QLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLR 210

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L+T+P  I  L SL  L ++ N++T+LP  I  L+ L+ L+L  N     P+++
Sbjct: 211 SN--KLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEI 267



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 1/103 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++  L ++ NQ+  LP  +  L  L+ L +SGN +  LPK I   ++LE L+ + N
Sbjct: 291 GQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNN 350

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD 110
           KL  LP  IG +L  L+ L +  N++  LP+ +  L +L+ L+
Sbjct: 351 KLNALPKEIG-QLKKLQRLELGNNQLTTLPKEIEQLKNLQRLE 392


>gi|24213573|ref|NP_711054.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386073187|ref|YP_005987504.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24194363|gb|AAN48072.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353456976|gb|AER01521.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 423

 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 107/198 (54%), Gaps = 27/198 (13%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNAN---------- 65
           LD+ SN+LK +P  I  L  LKVL ++GN L SLPK IE  ++L+ LN            
Sbjct: 207 LDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQILPVE 266

Query: 66  -------------FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDAR 112
                        +N+L + P  +G +L +LK LS+  N+I  LP  +T L  L+ L   
Sbjct: 267 ILELKNLLELNLYYNQLVEFPKEVG-QLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLS 325

Query: 113 LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
            N +  LP+++  L NLE L++S N   L  LP  IG L  L  L++  N++TTLP  I 
Sbjct: 326 GNKITILPKEILQLKNLEWLSLSNN--KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIE 383

Query: 173 CLRKLQKLSLEGNPLVSP 190
            L+ LQ+L L+ NP +SP
Sbjct: 384 QLKNLQRLELDSNP-ISP 400



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 105/183 (57%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V  LD+    LK LPN IG L  L+ LD+ GN    L K I   + L++LN N NKL  
Sbjct: 42  DVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTV 101

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ LS++ N++V LP+ +    +L+ L+   N L  LP+++  L NL+ 
Sbjct: 102 LPKEIG-QLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQE 160

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L++  N   L +LP  I  L SL  LD+++N++TT+   +  L  L+ L L  N L + P
Sbjct: 161 LSLLSN--KLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLRSNKLKTIP 218

Query: 192 MDV 194
            ++
Sbjct: 219 KEI 221



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  N+   L   I  L  L+ L+++ N L  LPK I   ++L+EL+ + N
Sbjct: 61  GQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSN 120

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +  NL+ L+++ NK+ +LP+ +  L +L+ L    N L SLP ++E L 
Sbjct: 121 ELVNLPKEIG-QFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLK 179

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L+++ N   L T+   + LL +L  LD+  NK+ T+P  I  L+ L+ L L GN L
Sbjct: 180 SLKNLDLNHN--ELTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQL 237

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 238 TSLPKEI 244



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 106/179 (59%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L++++N+L  LP  IG L  L+ L +  N L +LPK I   ++L++LN + NKL  LP  
Sbjct: 92  LNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKE 151

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL+ LS+  NK++ LP  +  L SL+ LD   N L ++ +++  L  LE L++ 
Sbjct: 152 IG-QLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLR 210

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L+T+P  I  L SL  L ++ N++T+LP  I  L+ L+ L+L  N     P+++
Sbjct: 211 SN--KLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQILPVEI 267



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 1/103 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++  L ++ NQ+  LP  +  L  L+ L +SGN +  LPK I   ++LE L+ + N
Sbjct: 291 GQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNN 350

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD 110
           KL  LP  IG +L  L+ L +  N++  LP+ +  L +L+ L+
Sbjct: 351 KLNALPKEIG-QLKKLQRLELGNNQLTTLPKEIEQLKNLQRLE 392



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R LD     LK+LP  +  L NL+ L++  N   +  L   I  L  L 
Sbjct: 33  LAKALQNPADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTI--LSKEIWQLKDLQ 90

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +L+++ NK+T LP  IG L+ LQ+LSL  N LV+ P ++
Sbjct: 91  KLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEI 129


>gi|418690500|ref|ZP_13251616.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|421128085|ref|ZP_15588303.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421133358|ref|ZP_15593506.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|400360685|gb|EJP16657.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|410022366|gb|EKO89143.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410434552|gb|EKP83690.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 423

 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 107/198 (54%), Gaps = 27/198 (13%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNAN---------- 65
           LD+ SN+LK +P  I  L  LKVL ++GN L SLPK IE  ++L+ LN            
Sbjct: 207 LDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVE 266

Query: 66  -------------FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDAR 112
                        +N+L + P  +G +L +LK LS+  N+I  LP  +T L  L+ L   
Sbjct: 267 ILELKNLLELNLYYNQLVEFPKEVG-QLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLS 325

Query: 113 LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
            N +  LP+++  L NLE L++S N   L  LP  IG L  L  L++  N++TTLP  I 
Sbjct: 326 GNKITILPKEILQLKNLEWLSLSNN--KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIE 383

Query: 173 CLRKLQKLSLEGNPLVSP 190
            L+ LQ+L L+ NP +SP
Sbjct: 384 QLKNLQRLELDSNP-ISP 400



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 103/183 (56%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V  LD+    LK LPN IG L  L+ LD+ GN    L K I   + L++LN N NKL  
Sbjct: 42  DVRNLDLSFLGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTV 101

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  IG +L NL+ LS++ N++V LP+ +    +L+ L+   N L  LP+++  L NL+ 
Sbjct: 102 LPKEIG-QLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQE 160

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L++  N   L +LP  I  L SL  LD++ N+ TT+   +  L  L+ L L  N L + P
Sbjct: 161 LSLLSN--KLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIP 218

Query: 192 MDV 194
            ++
Sbjct: 219 KEI 221



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 107/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  LD+  N+   L   I  L  L+ L+++ N L  LPK I   ++L+EL+ + N
Sbjct: 61  GQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSN 120

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  IG +  NL+ L+++ NK+ +LP+ +  L +L+ L    N L SLP ++E L 
Sbjct: 121 ELVNLPKEIG-QFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLK 179

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L+++ N     T+   + LL +L  LD+  NK+ T+P  I  L+ L+ L L GN L
Sbjct: 180 SLKNLDLNNN--EFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQL 237

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 238 TSLPKEI 244



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 105/179 (58%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L++++N+L  LP  IG L  L+ L +  N L +LPK I   ++L++LN + NKL  LP  
Sbjct: 92  LNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKE 151

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L NL+ LS+  NK++ LP  +  L SL+ LD   N   ++ +++  L  LE L++ 
Sbjct: 152 IG-QLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLR 210

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L+T+P  I  L SL  L ++ N++T+LP  I  L+ L+ L+L  N     P+++
Sbjct: 211 SN--KLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEI 267



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 1/103 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++  L ++ NQ+  LP  +  L  L+ L +SGN +  LPK I   ++LE L+ + N
Sbjct: 291 GQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNN 350

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLD 110
           KL  LP  IG +L  L+ L +  N++  LP+ +  L +L+ L+
Sbjct: 351 KLNALPKEIG-QLKKLQRLELGNNQLTTLPKEIEQLKNLQRLE 392



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 2/99 (2%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R LD     LK+LP  +  L NL+ L++  N   +  L   I  L  L 
Sbjct: 33  LEKALQNPADVRNLDLSFLGLKTLPNKIGQLKNLQKLDLGGNEPTI--LSKEIWQLKDLQ 90

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +L+++ NK+T LP  IG L+ LQ+LSL  N LV+ P ++
Sbjct: 91  KLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEI 129


>gi|119585970|gb|EAW65566.1| malignant fibrous histiocytoma amplified sequence 1 [Homo sapiens]
          Length = 1052

 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 118/250 (47%), Gaps = 44/250 (17%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P  L A L ++  LDV  N+L  LP+S+ CLS+L+ LDV  N L + P+ +    +LEE
Sbjct: 150 LPAQLGA-LAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEE 208

Query: 62  LNANFNKLRQLPDTI---------------------GF-ELINLKTLSINCNKIVILPQS 99
           L+ + N+LR LP+ I                     GF EL +L++L ++ N +  LP  
Sbjct: 209 LDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQ 268

Query: 100 LTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNF--------------------- 138
            + L  L++L+   N  +  P  L  L  LE L +S+N                      
Sbjct: 269 FSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDN 328

Query: 139 QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQG 198
             +  LP SI  L  L EL +  N+I  LPD  G L ++    ++ NPL+ PP +V  +G
Sbjct: 329 NRIRYLPDSIVELTGLEELVLQGNQIAVLPDHFGQLSRVGLWKIKDNPLIQPPYEVCMKG 388

Query: 199 LSAVKGYLSE 208
           +  +  Y  E
Sbjct: 389 IPYIAAYQKE 398



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 4/171 (2%)

Query: 16  LDVHSNQLKCL-PNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           LDV  N+L  L    +  L +L+ L++S N L +LP  +     LEEL+ +FN+L  LPD
Sbjct: 116 LDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPD 175

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
           ++   L  L+TL ++ N++   P+ L  L +L  LD   N L+ LPED+  L  L++L +
Sbjct: 176 SLSC-LSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWL 234

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           S     L TLP     L SL  L +  N +  LP    CL++L+ L+L  N
Sbjct: 235 SG--AELGTLPAGFCELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSSN 283



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 52/146 (35%), Positives = 79/146 (54%), Gaps = 8/146 (5%)

Query: 55  NCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLT----HLTSLRVLD 110
           N   +E LN   N L ++P+ +G  L +L+ L +  N+   LP ++     HLT L V  
Sbjct: 61  NLGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSH 120

Query: 111 ARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDS 170
            RL  L +  E +  L  L  LN+S N   L  LP  +G L  L ELDVS+N++  LPDS
Sbjct: 121 NRLTALGA--EVVSALRELRKLNLSHN--QLPALPAQLGALAHLEELDVSFNRLAHLPDS 176

Query: 171 IGCLRKLQKLSLEGNPLVSPPMDVVE 196
           + CL +L+ L ++ N L + P  +++
Sbjct: 177 LSCLSRLRTLDVDHNQLTAFPRQLLQ 202


>gi|4239895|dbj|BAA74737.1| MASL1 [Homo sapiens]
          Length = 1052

 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 118/250 (47%), Gaps = 44/250 (17%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P  L A L ++  LDV  N+L  LP+S+ CLS+L+ LDV  N L + P+ +    +LEE
Sbjct: 150 LPAQLGA-LAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEE 208

Query: 62  LNANFNKLRQLPDTI---------------------GF-ELINLKTLSINCNKIVILPQS 99
           L+ + N+LR LP+ I                     GF EL +L++L ++ N +  LP  
Sbjct: 209 LDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQ 268

Query: 100 LTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNF--------------------- 138
            + L  L++L+   N  +  P  L  L  LE L +S+N                      
Sbjct: 269 FSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDN 328

Query: 139 QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQG 198
             +  LP SI  L  L EL +  N+I  LPD  G L ++    ++ NPL+ PP +V  +G
Sbjct: 329 NRIRYLPDSIVELTGLEELVLQGNQIAVLPDHFGQLSRVGLWKIKDNPLIQPPYEVCMKG 388

Query: 199 LSAVKGYLSE 208
           +  +  Y  E
Sbjct: 389 IPYIAAYQKE 398



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 4/171 (2%)

Query: 16  LDVHSNQLKCL-PNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           LDV  N+L  L    +  L +L+ L++S N L +LP  +     LEEL+ +FN+L  LPD
Sbjct: 116 LDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPD 175

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
           ++   L  L+TL ++ N++   P+ L  L +L  LD   N L+ LPED+  L  L++L +
Sbjct: 176 SLSC-LSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWL 234

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           S     L TLP     L SL  L +  N +  LP    CL++L+ L+L  N
Sbjct: 235 SG--AELGTLPAGFCELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSSN 283



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 52/146 (35%), Positives = 79/146 (54%), Gaps = 8/146 (5%)

Query: 55  NCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLT----HLTSLRVLD 110
           N   +E LN   N L ++P+ +G  L +L+ L +  N+   LP ++     HLT L V  
Sbjct: 61  NLGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSH 120

Query: 111 ARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDS 170
            RL  L +  E +  L  L  LN+S N   L  LP  +G L  L ELDVS+N++  LPDS
Sbjct: 121 NRLTALGA--EVVSALRELRKLNLSHN--QLPALPAQLGALAHLEELDVSFNRLAHLPDS 176

Query: 171 IGCLRKLQKLSLEGNPLVSPPMDVVE 196
           + CL +L+ L ++ N L + P  +++
Sbjct: 177 LSCLSRLRTLDVDHNQLTAFPRQLLQ 202


>gi|255073607|ref|XP_002500478.1| predicted protein [Micromonas sp. RCC299]
 gi|226515741|gb|ACO61736.1| predicted protein [Micromonas sp. RCC299]
          Length = 383

 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/195 (37%), Positives = 109/195 (55%), Gaps = 4/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P  L  RL  ++ L++  NQL  LP  IG L+ L+ L++  N L S+P  I    SLE 
Sbjct: 21  VPAEL-GRLSALMDLNLGGNQLTLLPAEIGQLASLESLELGYNELTSVPVEIWQLASLEG 79

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+L  +P  IG +L +L+ LS+  N++  +P  +  LTSL  LD R N L S+P 
Sbjct: 80  LYLGGNQLTSVPAEIG-QLTSLEDLSLEANRLTSVPTEIGQLTSLTQLDLRDNQLTSVPA 138

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L  LN++ N   L ++P  I  L SL EL +S N +T++P  I  L  L KLS
Sbjct: 139 EIWRLTSLTYLNLNDN--QLTSVPAEIRQLTSLRELWLSANHLTSVPAEIWQLAALVKLS 196

Query: 182 LEGNPLVSPPMDVVE 196
           +  N L S P ++ +
Sbjct: 197 VTENQLTSVPAEIWQ 211



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 105/186 (56%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RL ++  L+++ NQL  +P  I  L+ L+ L +S N L S+P  I    +L +L+   N+
Sbjct: 142 RLTSLTYLNLNDNQLTSVPAEIRQLTSLRELWLSANHLTSVPAEIWQLAALVKLSVTENQ 201

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  +P  I ++L +L  L ++ N++  +P  +  LTSL  L    N L S+P ++  + +
Sbjct: 202 LTSVPAEI-WQLTSLTELYLHGNQLTSVPAEIGQLTSLTALSLYDNQLTSVPAEIGQIRS 260

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L  L++  N   L +LP  IG L +LVE ++  N +T++P  IG L  L +LSL GN L 
Sbjct: 261 LVKLSLHGN--RLTSLPAEIGQLRALVEFELDRNLLTSVPAEIGHLTSLTELSLHGNQLT 318

Query: 189 SPPMDV 194
           S P ++
Sbjct: 319 SVPSEI 324



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 103/198 (52%), Gaps = 5/198 (2%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L + +N L  +P  I  L+ L  L V+ N L S+P  I    SL EL  + N+L  +P  
Sbjct: 172 LWLSANHLTSVPAEIWQLAALVKLSVTENQLTSVPAEIWQLTSLTELYLHGNQLTSVPAE 231

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L +L  LS+  N++  +P  +  + SL  L    N L SLP ++  L  L    + 
Sbjct: 232 IG-QLTSLTALSLYDNQLTSVPAEIGQIRSLVKLSLHGNRLTSLPAEIGQLRALVEFELD 290

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
           +N   L ++P  IG L SL EL +  N++T++P  IG L  L +LSL GN L S P  + 
Sbjct: 291 RNL--LTSVPAEIGHLTSLTELSLHGNQLTSVPSEIGQLTSLGELSLSGNQLTSVPAAMR 348

Query: 196 EQGLSAVKGYLSEKMNND 213
           E  L A   Y+   +++D
Sbjct: 349 E--LEAAGCYMDLDLDSD 364



 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 87/160 (54%), Gaps = 7/160 (4%)

Query: 35  KLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
           +LK   ++G    ++P  +    +L +LN   N+L  LP  IG +L +L++L +  N++ 
Sbjct: 11  ELKEFGLTG----AVPAELGRLSALMDLNLGGNQLTLLPAEIG-QLASLESLELGYNELT 65

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSL 154
            +P  +  L SL  L    N L S+P ++  L +LE L++  N   L ++P  IG L SL
Sbjct: 66  SVPVEIWQLASLEGLYLGGNQLTSVPAEIGQLTSLEDLSLEAN--RLTSVPTEIGQLTSL 123

Query: 155 VELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            +LD+  N++T++P  I  L  L  L+L  N L S P ++
Sbjct: 124 TQLDLRDNQLTSVPAEIWRLTSLTYLNLNDNQLTSVPAEI 163



 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 1/92 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           ++V L +H N+L  LP  IG L  L   ++  NLL S+P  I +  SL EL+ + N+L  
Sbjct: 260 SLVKLSLHGNRLTSLPAEIGQLRALVEFELDRNLLTSVPAEIGHLTSLTELSLHGNQLTS 319

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHL 103
           +P  IG +L +L  LS++ N++  +P ++  L
Sbjct: 320 VPSEIG-QLTSLGELSLSGNQLTSVPAAMREL 350


>gi|348555513|ref|XP_003463568.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein
           4-like [Cavia porcellus]
          Length = 559

 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/232 (34%), Positives = 117/232 (50%), Gaps = 32/232 (13%)

Query: 3   PESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEEL 62
           P+    + L  + LD   N +  LP+ +G LSKLK+L ++GN   S P+ + +  SLE+L
Sbjct: 320 PQICALKDLEALALD--DNNIGQLPSELGLLSKLKILGLTGNQFLSFPEEVFSLASLEKL 377

Query: 63  ---NANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
                  +KL +LP+ IG +L NLK L I  N +  LP SL  +  L VLD R N LK L
Sbjct: 378 YIGQDQGSKLSRLPEQIG-KLQNLKELYIENNSLEYLPVSLGSMPKLEVLDCRHNLLKQL 436

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P++                         I     L EL +  N +T LP+++  L  L+ 
Sbjct: 437 PDE-------------------------ICQAQGLRELLLEDNLLTCLPENLDSLENLKV 471

Query: 180 LSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWV-GKLVKYG 230
           L+L  NP+ +PP++V  QG  A+  YL E  N   K+ K ++W  G +V+ G
Sbjct: 472 LTLMNNPMKAPPIEVCAQGNEAMWRYLRESRNQRIKATKIQAWWRGIMVRKG 523



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 100/194 (51%), Gaps = 4/194 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           + P+ L   L N+ ++D+  N+L+ LP  IG L++L+ L V+ N L SLP+++  CR + 
Sbjct: 179 VFPQELCV-LPNLEIIDLDENKLRALPEEIGDLTRLQKLYVAHNQLPSLPRSLCRCRKMT 237

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L  + N L  LP   G EL  +  L ++ N +  +P+ +    +L +L  R   L+ L 
Sbjct: 238 VLEVSHNLLDSLPCAPG-ELPRMTELGLSGNCLGKVPRLVCRWPALHLLYLRDAGLRGLR 296

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
                L+ L  L++ QN   L+  P  I  L  L  L +  N I  LP  +G L KL+ L
Sbjct: 297 RSFGRLLQLRFLDLGQN--QLDRFPPQICALKDLEALALDDNNIGQLPSELGLLSKLKIL 354

Query: 181 SLEGNPLVSPPMDV 194
            L GN  +S P +V
Sbjct: 355 GLTGNQFLSFPEEV 368



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 99/183 (54%), Gaps = 3/183 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLE-SLPKTIENCRSLEELNANFNK 68
           L ++ +L +  N L+ L   +G LS L+ LD+S N L  S  + +   R+L EL      
Sbjct: 70  LRHIRILYLDRNNLRELCPELGALSNLEGLDLSCNPLNPSSLQVLSGLRALRELRLYHLD 129

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           LR+LP  +   L +L+ L ++ N +  LP+ + +   LR +  + N  K  P++L  L N
Sbjct: 130 LRELPVVVCKHLHHLELLGLSRNCLEALPKEIVNQLKLREIYLQQNQFKVFPQELCVLPN 189

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           LE++++ +N   L  LP  IG L  L +L V++N++ +LP S+   RK+  L +  N L 
Sbjct: 190 LEIIDLDEN--KLRALPEEIGDLTRLQKLYVAHNQLPSLPRSLCRCRKMTVLEVSHNLLD 247

Query: 189 SPP 191
           S P
Sbjct: 248 SLP 250



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 88/195 (45%), Gaps = 22/195 (11%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N L+ LP  I    KL+ + +  N  +  P+ +    +LE ++ + NKLR LP+ IG +L
Sbjct: 152 NCLEALPKEIVNQLKLREIYLQQNQFKVFPQELCVLPNLEIIDLDENKLRALPEEIG-DL 210

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNF-- 138
             L+ L +  N++  LP+SL     + VL+   N L SLP     L  +  L +S N   
Sbjct: 211 TRLQKLYVAHNQLPSLPRSLCRCRKMTVLEVSHNLLDSLPCAPGELPRMTELGLSGNCLG 270

Query: 139 -------------------QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
                                L  L  S G L+ L  LD+  N++   P  I  L+ L+ 
Sbjct: 271 KVPRLVCRWPALHLLYLRDAGLRGLRRSFGRLLQLRFLDLGQNQLDRFPPQICALKDLEA 330

Query: 180 LSLEGNPLVSPPMDV 194
           L+L+ N +   P ++
Sbjct: 331 LALDDNNIGQLPSEL 345



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 90/214 (42%), Gaps = 56/214 (26%)

Query: 27  PNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGF-------- 78
           P  IG   +   +D S   L ++P  I     LEE++   N+L ++   I          
Sbjct: 21  PQVIG---RTFFIDTSNRNLTAIPPEILALEDLEEVHLENNRLEEISQDIQHLRHIRILY 77

Query: 79  --------------ELINLKTLSINCNKIVILPQSLTHLTSLRVL-DARL---------- 113
                          L NL+ L ++CN +   P SL  L+ LR L + RL          
Sbjct: 78  LDRNNLRELCPELGALSNLEGLDLSCNPLN--PSSLQVLSGLRALRELRLYHLDLRELPV 135

Query: 114 ----------------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVEL 157
                           NCL++LP+++ N + L  + + QN    +  P  + +L +L  +
Sbjct: 136 VVCKHLHHLELLGLSRNCLEALPKEIVNQLKLREIYLQQN--QFKVFPQELCVLPNLEII 193

Query: 158 DVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           D+  NK+  LP+ IG L +LQKL +  N L S P
Sbjct: 194 DLDENKLRALPEEIGDLTRLQKLYVAHNQLPSLP 227


>gi|295828958|gb|ADG38148.1| AT2G17440-like protein [Neslia paniculata]
          Length = 162

 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 101/164 (61%), Gaps = 3/164 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+HSN++  LP SIG L  L  L++SGN L SLP        LEEL+ + N L  LP++
Sbjct: 2   LDLHSNRIGQLPESIGDLLNLVNLNLSGNQLSSLPSAFSRLIHLEELDLSSNSLSTLPES 61

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L++LK L +  N I  +P S++  +SL+ L A  N LK+LPE +  L  LE+LN+ 
Sbjct: 62  IG-SLVSLKKLDVETNNIEEIPHSISGCSSLKELCADYNRLKALPEAVGKLSTLEILNV- 119

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
             +  +  LP ++  + +L ELDVS+N++ ++P+S+   + L K
Sbjct: 120 -RYNNIRQLPTTMSSMANLKELDVSFNELESVPESLCYAKTLVK 162



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 49/116 (42%), Positives = 76/116 (65%), Gaps = 1/116 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +RL+++  LD+ SN L  LP SIG L  LK LDV  N +E +P +I  C SL+EL A++N
Sbjct: 40  SRLIHLEELDLSSNSLSTLPESIGSLVSLKKLDVETNNIEEIPHSISGCSSLKELCADYN 99

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDL 123
           +L+ LP+ +G +L  L+ L++  N I  LP +++ + +L+ LD   N L+S+PE L
Sbjct: 100 RLKALPEAVG-KLSTLEILNVRYNNIRQLPTTMSSMANLKELDVSFNELESVPESL 154



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 79/125 (63%), Gaps = 3/125 (2%)

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L+ + N++ QLP++IG +L+NL  L+++ N++  LP + + L  L  LD   N L +LP
Sbjct: 1   KLDLHSNRIGQLPESIG-DLLNLVNLNLSGNQLSSLPSAFSRLIHLEELDLSSNSLSTLP 59

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E + +L++L+ L++  N   +E +P+SI    SL EL   YN++  LP+++G L  L+ L
Sbjct: 60  ESIGSLVSLKKLDVETN--NIEEIPHSISGCSSLKELCADYNRLKALPEAVGKLSTLEIL 117

Query: 181 SLEGN 185
           ++  N
Sbjct: 118 NVRYN 122



 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 74/148 (50%), Gaps = 8/148 (5%)

Query: 109 LDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           LD   N +  LPE + +L+NL  LN+S N   L +LP +   L+ L ELD+S N ++TLP
Sbjct: 2   LDLHSNRIGQLPESIGDLLNLVNLNLSGN--QLSSLPSAFSRLIHLEELDLSSNSLSTLP 59

Query: 169 DSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVK 228
           +SIG L  L+KL +E N +   P  +   G S++K  L    N     P+    VGKL  
Sbjct: 60  ESIGSLVSLKKLDVETNNIEEIPHSI--SGCSSLK-ELCADYNRLKALPE---AVGKLST 113

Query: 229 YGTFNGALRNHRSEERERFIMSDFRAID 256
               N    N R        M++ + +D
Sbjct: 114 LEILNVRYNNIRQLPTTMSSMANLKELD 141


>gi|441648556|ref|XP_004093063.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog [Nomascus
           leucogenys]
          Length = 1582

 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 109/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 93  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 152

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP+ + +L +L  L+ R N LKSLP  L  L+
Sbjct: 153 LSRLPD--GFTQLRSLAHLALNDVSLQALPRDVGNLANLVTLELRENLLKSLPASLSFLV 210

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 211 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 268

Query: 188 VSPPMD 193
              P +
Sbjct: 269 EELPAE 274



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 69/202 (34%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 224 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLT 282

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N LR+LPD IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 283 DLLLSQNLLRRLPDGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALP 341

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 342 RSLGKLTKLTNLNVDRN--HLEALPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVL 399

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 400 DVAGNRLQSLPFALTHLNLKAL 421



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 115 ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 174

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 175 SLQALPRDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 233

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 234 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 272



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 104/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 156 LPDGFT-QLRSLAHLALNDVSLQALPRDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 214

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 215 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPA 273

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L+ L  L +SQN   L  LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 274 ELGGLVLLTDLLLSQNL--LRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 331

Query: 182 LEGNPLVSPP 191
           L  N L++ P
Sbjct: 332 LTENLLMALP 341



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 186 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 245

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LP+ +  L  L
Sbjct: 246 SALPPELG-NLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL 304

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
            +L + QN   L  +  +IG   +L EL ++ N +  LP S+G L KL  L+++ N L +
Sbjct: 305 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEA 362

Query: 190 PPMDV 194
            P ++
Sbjct: 363 LPPEI 367



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/136 (34%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP+++     L  
Sbjct: 294 LPDGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTN 352

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++ +LP  L H   L VLD   N L+SLP 
Sbjct: 353 LNVDRNHLEALPPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPF 411

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 412 ALTHL-NLKALWLAEN 426



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 44/165 (26%), Positives = 69/165 (41%), Gaps = 48/165 (29%)

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLN------------------ 114
           P    F L+NL+ L ++ N+I  LP  + +   L  LD   N                  
Sbjct: 87  PSKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIA 146

Query: 115 ----------------------------CLKSLPEDLENLINLEVLNISQNFQYLETLPY 146
                                        L++LP D+ NL NL  L + +N   L++LP 
Sbjct: 147 DFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPRDVGNLANLVTLELRENL--LKSLPA 204

Query: 147 SIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           S+  L+ L +LD+  N +  LPD++G L  L++L L+ N L + P
Sbjct: 205 SLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALP 249


>gi|440804073|gb|ELR24954.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 827

 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/182 (36%), Positives = 104/182 (57%), Gaps = 3/182 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L  +  L ++ N LK LP  IG L++L++LD+  N L ++P  I++   L +L   FN
Sbjct: 409 GHLKGLTALGLNENNLKKLPPEIGNLTRLRILDLRYNKLRTVPANIKHLTQLSKLFLRFN 468

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L +LP+ IG  L +L+ LS+  N++  LP+SL   T+L+VLD   N L+ L  +L  LI
Sbjct: 469 RLVELPEEIG-SLQSLEILSVRNNQLTSLPRSLDLATNLKVLDVSTNKLQFLNCNLSPLI 527

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L+  QN   L  LP     L +L  +D+S+N+    P ++  L  L +L +EGN L
Sbjct: 528 FLKELDCKQNM--LSVLPTGWSTLSNLTRVDLSHNQFAQFPPALAELPSLAELDMEGNQL 585

Query: 188 VS 189
            S
Sbjct: 586 TS 587



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 86/155 (55%), Gaps = 3/155 (1%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +V +D    QL  +P  +   +   +L++  N LES+P  I + + L  L  N N L++L
Sbjct: 368 IVSVDYSRRQLTSVPPQVWQSTDATILNMYMNKLESIPPDIGHLKGLTALGLNENNLKKL 427

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P  IG  L  L+ L +  NK+  +P ++ HLT L  L  R N L  LPE++ +L +LE+L
Sbjct: 428 PPEIG-NLTRLRILDLRYNKLRTVPANIKHLTQLSKLFLRFNRLVELPEEIGSLQSLEIL 486

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
           ++  N   L +LP S+ L  +L  LDVS NK+  L
Sbjct: 487 SVRNN--QLTSLPRSLDLATNLKVLDVSTNKLQFL 519



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 100/225 (44%), Gaps = 48/225 (21%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD   N L  LP     LS L  +D+S N     P  +    SL EL+   N+L  L D 
Sbjct: 532 LDCKQNMLSVLPTGWSTLSNLTRVDLSHNQFAQFPPALAELPSLAELDMEGNQLTSLVD- 590

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE-------------- 121
           IG +L  L+ L +N N++V LP S+  L SL+ L  R N L SLPE              
Sbjct: 591 IG-QLTALERLYLNSNRLVTLPPSMGKLRSLKYLQLRANQLTSLPEGTSCVMAGLELREA 649

Query: 122 DLEN-----------LINLEVLNISQNF---------------------QYLETLPYSIG 149
           DL +           +  L+ L+I+ N                        LE+L   + 
Sbjct: 650 DLSSNNFSEMPEAILVSTLQNLSITDNVMTKLPPTITRLQSLKTCNLEGNQLESLDPGVA 709

Query: 150 LLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           LL +LV L + YN+I+T+PD +  +  LQ+L LE N L S P  +
Sbjct: 710 LLTNLVHLRLGYNEISTIPDEVSRMSSLQELDLEHNRLESLPQTI 754



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 106/217 (48%), Gaps = 32/217 (14%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRS---LEELNANFNKLRQL 72
           L ++SN+L  LP S+G L  LK L +  N L SLP+      +   L E + + N   ++
Sbjct: 600 LYLNSNRLVTLPPSMGKLRSLKYLQLRANQLTSLPEGTSCVMAGLELREADLSSNNFSEM 659

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P+ I      L+ LSI  N +  LP ++T L SL+  +   N L+SL   +  L NL  L
Sbjct: 660 PEAILVS--TLQNLSITDNVMTKLPPTITRLQSLKTCNLEGNQLESLDPGVALLTNLVHL 717

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG-------------------- 172
            +  N   + T+P  +  + SL ELD+ +N++ +LP +IG                    
Sbjct: 718 RLGYN--EISTIPDEVSRMSSLQELDLEHNRLESLPQTIGGMLALSLLVLNDNLLDDLPN 775

Query: 173 ---CLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYL 206
               L KL +L ++GNP+ + P    +QG +AV  +L
Sbjct: 776 ELVLLDKLTELKVDGNPMKNIP--DADQGGNAVFHFL 810



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 78/153 (50%), Gaps = 3/153 (1%)

Query: 35  KLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIV 94
           K+  +D S   L S+P  +        LN   NKL  +P  IG  L  L  L +N N + 
Sbjct: 367 KIVSVDYSRRQLTSVPPQVWQSTDATILNMYMNKLESIPPDIG-HLKGLTALGLNENNLK 425

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSL 154
            LP  + +LT LR+LD R N L+++P ++++L  L  L +   F  L  LP  IG L SL
Sbjct: 426 KLPPEIGNLTRLRILDLRYNKLRTVPANIKHLTQLSKLFL--RFNRLVELPEEIGSLQSL 483

Query: 155 VELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
             L V  N++T+LP S+     L+ L +  N L
Sbjct: 484 EILSVRNNQLTSLPRSLDLATNLKVLDVSTNKL 516



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 9/140 (6%)

Query: 55  NCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLN 114
           + +  ++ N    K+  LPD I        ++  +  ++  +P  +   T   +L+  +N
Sbjct: 347 SAKQAKQTNPKPPKIDPLPDKI-------VSVDYSRRQLTSVPPQVWQSTDATILNMYMN 399

Query: 115 CLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCL 174
            L+S+P D+ +L  L  L +++N   L+ LP  IG L  L  LD+ YNK+ T+P +I  L
Sbjct: 400 KLESIPPDIGHLKGLTALGLNEN--NLKKLPPEIGNLTRLRILDLRYNKLRTVPANIKHL 457

Query: 175 RKLQKLSLEGNPLVSPPMDV 194
            +L KL L  N LV  P ++
Sbjct: 458 TQLSKLFLRFNRLVELPEEI 477



 Score = 40.8 bits (94), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P ++T RL ++   ++  NQL+ L   +  L+ L  L +  N + ++P  +    SL+E
Sbjct: 681 LPPTIT-RLQSLKTCNLEGNQLESLDPGVALLTNLVHLRLGYNEISTIPDEVSRMSSLQE 739

Query: 62  LNANFNKLRQLPDTIG 77
           L+   N+L  LP TIG
Sbjct: 740 LDLEHNRLESLPQTIG 755


>gi|456984031|gb|EMG20193.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 526

 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/189 (39%), Positives = 108/189 (57%), Gaps = 10/189 (5%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTI---ENCRSLEELNAN 65
           RL N+  L ++   L  LP  I  L  L+ L +  N L+SLPK I    N RSL+ + AN
Sbjct: 331 RLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLD-IGAN 389

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
            N+   LP  I   L NL++L +N N+  I P+ +  L  L +L+   N L +LPE +  
Sbjct: 390 -NEFEVLPKEIA-RLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 447

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L  L++L++S N   L TLP  IG L +L EL + YN+I TLP+ I  L+ L+KL+L  N
Sbjct: 448 LKGLQMLDLSHN--RLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYEN 505

Query: 186 PLVSPPMDV 194
           P+  PP ++
Sbjct: 506 PI--PPQEL 512



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 98/180 (54%), Gaps = 3/180 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV +LD+   +    P  I  L  L++L +  N +  LP+ I   ++L+EL  N NKL  
Sbjct: 76  NVRILDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTI 135

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           +P  I +EL NL  L +  N+I  LP+ +    +L+ LD R N L +LPE +  L  LE 
Sbjct: 136 VPKEI-WELENLTILRLENNRISTLPKEIEKSKNLQELDLRGNRLVTLPEGIGELKLLEE 194

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LN+      ++ LP  IG L +L   ++S NK+ ++P  IG L+ L+ L LE N L + P
Sbjct: 195 LNLEN--NRIKILPKEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLP 252



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 87/161 (54%), Gaps = 3/161 (1%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           S +++LD+S       PK I     LE L    N++  LP  I  +L NLK L +N NK+
Sbjct: 75  SNVRILDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREIN-KLKNLKELYLNGNKL 133

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
            I+P+ +  L +L +L    N + +LP+++E   NL+ L++  N   L TLP  IG L  
Sbjct: 134 TIVPKEIWELENLTILRLENNRISTLPKEIEKSKNLQELDLRGN--RLVTLPEGIGELKL 191

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L EL++  N+I  LP  IG L  L   +L GN L S P ++
Sbjct: 192 LEELNLENNRIKILPKEIGALENLWIFNLSGNKLASIPKEI 232



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 22/148 (14%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L ++ N+L  +P  I  L  L +L +  N + +LPK IE  ++L+EL+   N+
Sbjct: 119 KLKNLKELYLNGNKLTIVPKEIWELENLTILRLENNRISTLPKEIEKSKNLQELDLRGNR 178

Query: 69  LRQLPDTIGF----------------------ELINLKTLSINCNKIVILPQSLTHLTSL 106
           L  LP+ IG                        L NL   +++ NK+  +P+ + +L +L
Sbjct: 179 LVTLPEGIGELKLLEELNLENNRIKILPKEIGALENLWIFNLSGNKLASIPKEIGNLQNL 238

Query: 107 RVLDARLNCLKSLPEDLENLINLEVLNI 134
           R+L    N LK+LP  +E L +LEVLN+
Sbjct: 239 RMLYLENNQLKTLPRQMEKLQDLEVLNL 266



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 1/102 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ARL N+  L ++ N+ K  P  I  L KL +L+V+ N L++LP+ I   + L+ L+ + N
Sbjct: 400 ARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHN 459

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           +L  LP  IG +L NL  L +  N+I  LP+ +  L +LR L
Sbjct: 460 RLTTLPSEIG-QLHNLTELYLQYNRIKTLPEEIARLQNLRKL 500



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 111/242 (45%), Gaps = 50/242 (20%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLES---------LPKT 52
           IP+ +   L N+ +L + +NQLK LP  +  L  L+VL++  N L S         LP  
Sbjct: 228 IPKEI-GNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSKERKKIQALLPDC 286

Query: 53  IENCRSLEE------LNANFNK-LRQLPDTIGFE-----------LINLKTLSINCNKIV 94
             + R +EE      LN    + L+ L  ++ ++           L NL++LS+    +V
Sbjct: 287 DIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFPLFSKEILRLKNLRSLSLYDTSLV 346

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY-------------- 140
            LP+ +  L  L  L   LN LKSLP+++  L NL  L+I  N ++              
Sbjct: 347 ALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLR 406

Query: 141 --------LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
                    +  P  I  L  LV L+V+ N++  LP+ IG L+ LQ L L  N L + P 
Sbjct: 407 SLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPS 466

Query: 193 DV 194
           ++
Sbjct: 467 EI 468



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 3/94 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +V+L+V++NQL  LP  IG L  L++LD+S N L +LP  I    +L EL   +N+++ L
Sbjct: 428 LVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTL 487

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSL 106
           P+ I   L NL+ L++  N I   PQ L  +  L
Sbjct: 488 PEEIA-RLQNLRKLTLYENPIP--PQELDKIRKL 518



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 97/226 (42%), Gaps = 53/226 (23%)

Query: 22  QLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTI----G 77
           ++K LP  IG L  L + ++SGN L S+PK I N ++L  L    N+L+ LP  +     
Sbjct: 201 RIKILPKEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQD 260

Query: 78  FELINL----------------------------------------------KTLSINCN 91
            E++NL                                               +LS+   
Sbjct: 261 LEVLNLLINPLLSKERKKIQALLPDCDIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQ 320

Query: 92  KIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLL 151
           +  +  + +  L +LR L      L +LP+++  L +LE L++  N   L++LP  IGLL
Sbjct: 321 QFPLFSKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLN--QLKSLPKEIGLL 378

Query: 152 MSLVELDV-SYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
            +L  LD+ + N+   LP  I  L+ L+ L L  N     P ++ E
Sbjct: 379 RNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWE 424


>gi|395517545|ref|XP_003762936.1| PREDICTED: protein LAP2-like, partial [Sarcophilus harrisii]
          Length = 592

 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 109/192 (56%), Gaps = 6/192 (3%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           +  N+L  +P  IG L +L  LDVS N +E + + I  C SLE+L  + N L+QLP++IG
Sbjct: 111 MDGNRLTFIPGLIGSLKQLTYLDVSKNNIEVVEEGISGCESLEDLLLSSNSLQQLPESIG 170

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
             L  L TL ++ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N
Sbjct: 171 -SLKKLTTLKVDENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIGQLSNIRTFAADHN 229

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE- 196
             YL+ LP  IG    +  L +  NK+ TLP+ +G ++KL+ ++L  N + + P    + 
Sbjct: 230 --YLQQLPQEIGSWKHVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRMKNLPFSFTKL 287

Query: 197 QGLSAVKGYLSE 208
           Q L+A+  +LS+
Sbjct: 288 QQLTAM--WLSD 297



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 85/144 (59%), Gaps = 3/144 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP SIG L KL  L V  N L  LP +I    S+EEL+ +FN++  LP +IG +
Sbjct: 159 SNSLQQLPESIGSLKKLTTLKVDENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIG-Q 217

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L N++T + + N +  LPQ +     + VL    N L++LPE++ ++  L+V+N+S N  
Sbjct: 218 LSNIRTFAADHNYLQQLPQEIGSWKHVTVLFLHSNKLETLPEEMGDMQKLKVINLSDN-- 275

Query: 140 YLETLPYSIGLLMSLVELDVSYNK 163
            ++ LP+S   L  L  + +S N+
Sbjct: 276 RMKNLPFSFTKLQQLTAMWLSDNQ 299



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 32  SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 91

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 92  EFTEVPEVLE-QLNGLKEFWMDGNRLTFIPGLIGSLKQLTYLDVSKNNIEVVEEGISGCE 150

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L  L  L + +N   L  LP SIG L+S+ ELD S+N+I
Sbjct: 151 SLEDLLLSSNSLQQLPESIGSLKKLTTLKVDEN--QLMYLPDSIGGLVSIEELDCSFNEI 208

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  ++  + + N L   P ++
Sbjct: 209 EALPSSIGQLSNIRTFAADHNYLQQLPQEI 238



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 99/180 (55%), Gaps = 3/180 (1%)

Query: 6   LTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNAN 65
           L   L  +  LDV  N ++ +   I     L+ L +S N L+ LP++I + + L  L  +
Sbjct: 122 LIGSLKQLTYLDVSKNNIEVVEEGISGCESLEDLLLSSNSLQQLPESIGSLKKLTTLKVD 181

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
            N+L  LPD+IG  L++++ L  + N+I  LP S+  L+++R   A  N L+ LP+++ +
Sbjct: 182 ENQLMYLPDSIGG-LVSIEELDCSFNEIEALPSSIGQLSNIRTFAADHNYLQQLPQEIGS 240

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
             ++ VL +  N   LETLP  +G +  L  +++S N++  LP S   L++L  + L  N
Sbjct: 241 WKHVTVLFLHSN--KLETLPEEMGDMQKLKVINLSDNRMKNLPFSFTKLQQLTAMWLSDN 298



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 89/157 (56%), Gaps = 10/157 (6%)

Query: 46  LESLPKTIENCRSLEELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLT 104
           ++  P+ I+NC+ L  + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT
Sbjct: 1   IQEFPENIKNCKVLTVVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLT 58

Query: 105 SLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
            L++L+ R N LK LP+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++
Sbjct: 59  KLQILELRENQLKMLPKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLNGLKEFWMDGNRL 116

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSA 201
           T +P  IG L++L  L +  N +     +VVE+G+S 
Sbjct: 117 TFIPGLIGSLKQLTYLDVSKNNI-----EVVEEGISG 148



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 74/136 (54%), Gaps = 2/136 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+   L  +  L V  NQL  LP+SIG L  ++ LD S N +E+LP +I    ++  
Sbjct: 165 LPESI-GSLKKLTTLKVDENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIGQLSNIRT 223

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
             A+ N L+QLP  IG    ++  L ++ NK+  LP+ +  +  L+V++   N +K+LP 
Sbjct: 224 FAADHNYLQQLPQEIG-SWKHVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRMKNLPF 282

Query: 122 DLENLINLEVLNISQN 137
               L  L  + +S N
Sbjct: 283 SFTKLQQLTAMWLSDN 298



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 3/179 (1%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           + V++   N +  LP+    L  L  L ++   LE LP        L+ L    N+L+ L
Sbjct: 14  LTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 73

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P T+   L  L+ L +  N+   +P+ L  L  L+      N L  +P  + +L  L  L
Sbjct: 74  PKTMN-RLTQLERLDLGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFIPGLIGSLKQLTYL 132

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           ++S+N   +E +   I    SL +L +S N +  LP+SIG L+KL  L ++ N L+  P
Sbjct: 133 DVSKN--NIEVVEEGISGCESLEDLLLSSNSLQQLPESIGSLKKLTTLKVDENQLMYLP 189


>gi|295828950|gb|ADG38144.1| AT2G17440-like protein [Capsella grandiflora]
          Length = 162

 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/164 (38%), Positives = 98/164 (59%), Gaps = 3/164 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+HSN++  LP SIG L  L  L++SGN L  LP        LEEL+ + N L  LP++
Sbjct: 2   LDLHSNRIGQLPESIGBLVYLVNLNLSGNQLSXLPPAFSRLIHLEELDLSSNSLSTLPES 61

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L++LK L +  N I  JP  ++  +SL+ L A  N LK+LPE +  L  LE+L + 
Sbjct: 62  IG-SLVSLKKLDVETNNIEEJPHXISGCSSLKELRABYNRLKALPEAVGKLSTLEILTV- 119

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
             +  +  LP ++  + +L ELDVS+N++ ++P+S+   + L K
Sbjct: 120 -RYNNIRQLPTTMSSMANLKELDVSFNELESVPESLCHAKTLVK 162



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 49/116 (42%), Positives = 75/116 (64%), Gaps = 1/116 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +RL+++  LD+ SN L  LP SIG L  LK LDV  N +E JP  I  C SL+EL AB+N
Sbjct: 40  SRLIHLEELDLSSNSLSTLPESIGSLVSLKKLDVETNNIEEJPHXISGCSSLKELRABYN 99

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDL 123
           +L+ LP+ +G +L  L+ L++  N I  LP +++ + +L+ LD   N L+S+PE L
Sbjct: 100 RLKALPEAVG-KLSTLEILTVRYNNIRQLPTTMSSMANLKELDVSFNELESVPESL 154



 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 93/155 (60%), Gaps = 4/155 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+   L+ +V L++  NQL  LP +   L  L+ LD+S N L +LP++I +  SL++
Sbjct: 12  LPESI-GBLVYLVNLNLSGNQLSXLPPAFSRLIHLEELDLSSNSLSTLPESIGSLVSLKK 70

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N + +JP  I     +LK L  B N++  LP+++  L++L +L  R N ++ LP 
Sbjct: 71  LDVETNNIEEJPHXISG-CSSLKELRABYNRLKALPEAVGKLSTLEILTVRYNNIRQLPT 129

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVE 156
            + ++ NL+ L++S  F  LE++P S+    +LV+
Sbjct: 130 TMSSMANLKELDVS--FNELESVPESLCHAKTLVK 162



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 77/125 (61%), Gaps = 3/125 (2%)

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L+ + N++ QLP++IG +L+ L  L+++ N++  LP + + L  L  LD   N L +LP
Sbjct: 1   KLDLHSNRIGQLPESIG-BLVYLVNLNLSGNQLSXLPPAFSRLIHLEELDLSSNSLSTLP 59

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E + +L++L+ L++  N   +E JP+ I    SL EL   YN++  LP+++G L  L+ L
Sbjct: 60  ESIGSLVSLKKLDVETN--NIEEJPHXISGCSSLKELRABYNRLKALPEAVGKLSTLEIL 117

Query: 181 SLEGN 185
           ++  N
Sbjct: 118 TVRYN 122



 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 4/95 (4%)

Query: 109 LDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           LD   N +  LPE + BL+ L  LN+S N   L  LP +   L+ L ELD+S N ++TLP
Sbjct: 2   LDLHSNRIGQLPESIGBLVYLVNLNLSGN--QLSXLPPAFSRLIHLEELDLSSNSLSTLP 59

Query: 169 DSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVK 203
           +SIG L  L+KL +E N +   P  +   G S++K
Sbjct: 60  ESIGSLVSLKKLDVETNNIEEJPHXI--SGCSSLK 92


>gi|260825530|ref|XP_002607719.1| hypothetical protein BRAFLDRAFT_82834 [Branchiostoma floridae]
 gi|229293068|gb|EEN63729.1| hypothetical protein BRAFLDRAFT_82834 [Branchiostoma floridae]
          Length = 816

 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 27/212 (12%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P++L   L N+  L V +N +K LP+ +  L+KL  L +SG   +  P+ +   ++LEE
Sbjct: 514 LPQAL-CLLYNLEQLSVGNNPIKSLPDDVARLAKLNTLCISGCQFDEFPRQVLQLKALEE 572

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L A   K   +PD +G  L N+  LS+ CN +  LP ++ H+ +L V+    N   + PE
Sbjct: 573 LWAGGCKFDFVPDEVG-NLPNMWLLSLECNFLKTLPSTMAHMNNLLVVHLLNNKFDAFPE 631

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L  L  +E                         +LD+S N IT LP ++    KL  L 
Sbjct: 632 VLCELPAME-------------------------KLDISNNNITKLPTALHQAGKLNDLD 666

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYLSEKMNND 213
           + GNPL  PP DV EQG  A+  +L ++   +
Sbjct: 667 VSGNPLTYPPQDVREQGTGAIMAFLKQEAEKE 698


>gi|321460374|gb|EFX71417.1| hypothetical protein DAPPUDRAFT_327214 [Daphnia pulex]
          Length = 1847

 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/186 (38%), Positives = 104/186 (55%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ VL ++   L  LP   G LS L+ +++  NLL +LP+++     LE L+   N 
Sbjct: 124 QLKNLTVLGLNDMSLSSLPLDFGSLSNLQSVELRENLLRTLPESMSQLTKLERLDLGDND 183

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           +  LP  IG  L  L  L ++ N++  LP+ L  LT+L  LD   N L S+PE++  LI+
Sbjct: 184 IEILPAHIG-SLPALTELWLDHNQLGQLPKELCQLTNLACLDVSENHLDSMPEEIGGLIS 242

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L  L++SQNF  LE+LP  IG L  L  L V  N++TTL  +IG    LQ+L L  N L 
Sbjct: 243 LTDLHLSQNF--LESLPDGIGALSKLTILKVDQNRLTTLNYAIGKCVALQELILTENFLT 300

Query: 189 SPPMDV 194
             P  +
Sbjct: 301 ELPTSI 306



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 104/197 (52%), Gaps = 7/197 (3%)

Query: 2   IPESL--TARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE L   +R L  ++LD  +N ++ LP +   L+KL+ L +S N ++ +P+ I+N  +L
Sbjct: 25  VPEDLWRYSRSLEELLLD--ANHIRDLPKNFFRLAKLRKLSLSDNEIQRIPQDIQNFENL 82

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N +  +P+TI   +  L+    + N I  LP     L +L VL      L SL
Sbjct: 83  VELDVSRNDISDIPETIKH-VKALQVADFSSNPIPRLPAGFVQLKNLTVLGLNDMSLSSL 141

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P D  +L NL+ + + +N   L TLP S+  L  L  LD+  N I  LP  IG L  L +
Sbjct: 142 PLDFGSLSNLQSVELRENL--LRTLPESMSQLTKLERLDLGDNDIEILPAHIGSLPALTE 199

Query: 180 LSLEGNPLVSPPMDVVE 196
           L L+ N L   P ++ +
Sbjct: 200 LWLDHNQLGQLPKELCQ 216



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/188 (34%), Positives = 97/188 (51%), Gaps = 5/188 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           NQL  LP  +  L+ L  LDVS N L+S+P+ I    SL +L+ + N L  LPD IG  L
Sbjct: 205 NQLGQLPKELCQLTNLACLDVSENHLDSMPEEIGGLISLTDLHLSQNFLESLPDGIGA-L 263

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
             L  L ++ N++  L  ++    +L+ L    N L  LP  + N+  L  LN+ +N   
Sbjct: 264 SKLTILKVDQNRLTTLNYAIGKCVALQELILTENFLTELPTSIGNMTKLTNLNVDRN--R 321

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLS 200
           L  LP  +G L+ L  L +  NK+  LP+ +G   +L  L + GN L   P+ +    L 
Sbjct: 322 LHELPVEVGHLVCLNVLSLRENKLHFLPNELGDCSELHVLDVSGNRLQYLPLSLTGLNLK 381

Query: 201 AVKGYLSE 208
           A+  +LSE
Sbjct: 382 AI--WLSE 387



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/141 (38%), Positives = 79/141 (56%), Gaps = 3/141 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +   L+++  L +  N L+ LP+ IG LSKL +L V  N L +L   I  C +L+E
Sbjct: 233 MPEEIGG-LISLTDLHLSQNFLESLPDGIGALSKLTILKVDQNRLTTLNYAIGKCVALQE 291

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N L +LP +IG  +  L  L+++ N++  LP  + HL  L VL  R N L  LP 
Sbjct: 292 LILTENFLTELPTSIG-NMTKLTNLNVDRNRLHELPVEVGHLVCLNVLSLRENKLHFLPN 350

Query: 122 DLENLINLEVLNISQN-FQYL 141
           +L +   L VL++S N  QYL
Sbjct: 351 ELGDCSELHVLDVSGNRLQYL 371



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 97/186 (52%), Gaps = 4/186 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES++ +L  +  LD+  N ++ LP  IG L  L  L +  N L  LPK +    +L  
Sbjct: 164 LPESMS-QLTKLERLDLGDNDIEILPAHIGSLPALTELWLDHNQLGQLPKELCQLTNLAC 222

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N L  +P+ IG  LI+L  L ++ N +  LP  +  L+ L +L    N L +L  
Sbjct: 223 LDVSENHLDSMPEEIGG-LISLTDLHLSQNFLESLPDGIGALSKLTILKVDQNRLTTLNY 281

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +   + L+ L +++NF  L  LP SIG +  L  L+V  N++  LP  +G L  L  LS
Sbjct: 282 AIGKCVALQELILTENF--LTELPTSIGNMTKLTNLNVDRNRLHELPVEVGHLVCLNVLS 339

Query: 182 LEGNPL 187
           L  N L
Sbjct: 340 LRENKL 345



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 3/144 (2%)

Query: 51  KTIENC-RSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           K  + C R +E ++     L  +P+ +     +L+ L ++ N I  LP++   L  LR L
Sbjct: 3   KIFKGCNRQVEYVDKRHCSLPSVPEDLWRYSRSLEELLLDANHIRDLPKNFFRLAKLRKL 62

Query: 110 DARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPD 169
               N ++ +P+D++N  NL  L++S+N   +  +P +I  + +L   D S N I  LP 
Sbjct: 63  SLSDNEIQRIPQDIQNFENLVELDVSRN--DISDIPETIKHVKALQVADFSSNPIPRLPA 120

Query: 170 SIGCLRKLQKLSLEGNPLVSPPMD 193
               L+ L  L L    L S P+D
Sbjct: 121 GFVQLKNLTVLGLNDMSLSSLPLD 144


>gi|456864237|gb|EMF82646.1| leucine rich repeat protein [Leptospira weilii serovar Topaz str.
           LT2116]
          Length = 348

 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/186 (40%), Positives = 107/186 (57%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  LD++ N+LK LPN IG L  LK L++SGN L  LP +I   ++LE L    N+
Sbjct: 84  QLQNLGTLDLYENELKALPNEIGKLENLKELNLSGNQLTVLPPSIGQLQNLEILELLRNQ 143

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP+ I   L +L+ L++  N+I  LP+ ++ L++L  LD   N +K L  D + L N
Sbjct: 144 LATLPEEI-VGLKSLQILNLFENEIKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQN 202

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ LN+  N   LE  P  I  L SL  L+++YN+   LP+ I  L  LQ L L GN L 
Sbjct: 203 LKSLNLLDN--KLENFPADIVQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLT 260

Query: 189 SPPMDV 194
           S P  +
Sbjct: 261 SLPEGI 266



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/185 (35%), Positives = 113/185 (61%), Gaps = 3/185 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+  L +  N+L  +P  IG L  L+ L ++ N+L+++P  IE  ++L  L+   N+L+ 
Sbjct: 41  NLEKLILFGNRLTAIPKEIGKLRNLETLILAENILKTIPNEIEQLQNLGTLDLYENELKA 100

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ IG +L NLK L+++ N++ +LP S+  L +L +L+   N L +LPE++  L +L++
Sbjct: 101 LPNEIG-KLENLKELNLSGNQLTVLPPSIGQLQNLEILELLRNQLATLPEEIVGLKSLQI 159

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LN+ +N   +++LP  I  L +L+ LD+  NKI  L      L+ L+ L+L  N L + P
Sbjct: 160 LNLFEN--EIKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENFP 217

Query: 192 MDVVE 196
            D+V+
Sbjct: 218 ADIVQ 222



 Score = 94.4 bits (233), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/195 (37%), Positives = 114/195 (58%), Gaps = 6/195 (3%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+  +L N+ +L++  NQL  LP  I  L  L++L++  N ++SLPK I    +L 
Sbjct: 123 VLPPSI-GQLQNLEILELLRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEISQLSNLI 181

Query: 61  ELNANFNKLRQLPDTIGFE-LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            L+   NK+++L  ++ F+ L NLK+L++  NK+   P  +  L SL  L+   N  K L
Sbjct: 182 WLDLGKNKIKRL--SLDFKRLQNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYNRFKIL 239

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++  L NL+VL ++ N   L +LP  IG L  L  L +  N++TTLP  IG LR L+ 
Sbjct: 240 PEEILQLENLQVLELTGN--QLTSLPEGIGRLEKLESLFLEGNRLTTLPKGIGHLRGLKI 297

Query: 180 LSLEGNPLVSPPMDV 194
           L LE N L + P ++
Sbjct: 298 LRLEQNRLTAIPEEI 312



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 69/177 (38%), Positives = 104/177 (58%), Gaps = 7/177 (3%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           +HSN  K L N     S++++LDVS   LE+LP+ I   ++LE+L    N+L  +P  IG
Sbjct: 5   IHSNLEKSLQNP----SEVRILDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEIG 60

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
            +L NL+TL +  N +  +P  +  L +L  LD   N LK+LP ++  L NL+ LN+S N
Sbjct: 61  -KLRNLETLILAENILKTIPNEIEQLQNLGTLDLYENELKALPNEIGKLENLKELNLSGN 119

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
              L  LP SIG L +L  L++  N++ TLP+ I  L+ LQ L+L  N + S P ++
Sbjct: 120 --QLTVLPPSIGQLQNLEILELLRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEI 174



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 65/182 (35%), Positives = 103/182 (56%), Gaps = 4/182 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +   L ++ +L++  N++K LP  I  LS L  LD+  N ++ L    +  ++L+ 
Sbjct: 147 LPEEIVG-LKSLQILNLFENEIKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQNLKS 205

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   NKL   P  I  +L +L+ L++N N+  ILP+ +  L +L+VL+   N L SLPE
Sbjct: 206 LNLLDNKLENFPADI-VQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSLPE 264

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L  LE L +  N   L TLP  IG L  L  L +  N++T +P+ IG L+ L++L 
Sbjct: 265 GIGRLEKLESLFLEGN--RLTTLPKGIGHLRGLKILRLEQNRLTAIPEEIGSLQNLKELY 322

Query: 182 LE 183
           L+
Sbjct: 323 LQ 324



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 23/153 (15%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++L N++ LD+  N++K L      L  LK L++  N LE+ P  I   +SLE LN N+N
Sbjct: 175 SQLSNLIWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYN 234

Query: 68  KLRQLPDTI------------GFELINL----------KTLSINCNKIVILPQSLTHLTS 105
           + + LP+ I            G +L +L          ++L +  N++  LP+ + HL  
Sbjct: 235 RFKILPEEILQLENLQVLELTGNQLTSLPEGIGRLEKLESLFLEGNRLTTLPKGIGHLRG 294

Query: 106 LRVLDARLNCLKSLPEDLENLINLEVLNISQNF 138
           L++L    N L ++PE++ +L NL+ L + Q+F
Sbjct: 295 LKILRLEQNRLTAIPEEIGSLQNLKELYL-QDF 326



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 2/86 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++PE +  +L N+ VL++  NQL  LP  IG L KL+ L + GN L +LPK I + R L+
Sbjct: 238 ILPEEI-LQLENLQVLELTGNQLTSLPEGIGRLEKLESLFLEGNRLTTLPKGIGHLRGLK 296

Query: 61  ELNANFNKLRQLPDTIGFELINLKTL 86
            L    N+L  +P+ IG  L NLK L
Sbjct: 297 ILRLEQNRLTAIPEEIG-SLQNLKEL 321


>gi|170586680|ref|XP_001898107.1| PDZ-domain protein scribble [Brugia malayi]
 gi|158594502|gb|EDP33086.1| PDZ-domain protein scribble, putative [Brugia malayi]
          Length = 1245

 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 97/178 (54%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A L  +  L++  N +  LP  I    +LK+LD+S N +  LP+TI    S+  L  N  
Sbjct: 80  AHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPQTITQLTSMTSLGLNDI 139

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L Q+P  IG  L NL++L +  N +  +P S++ L  LR LD   N L  LP ++  L 
Sbjct: 140 SLTQMPHDIGH-LRNLRSLEVRENLLRTVPPSISELNQLRRLDLGHNELDDLPNEIGMLE 198

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NLE L + QN   LE LP SI    SL +LDVS NK+  LPD IG L KL  L++  N
Sbjct: 199 NLEELYVDQN--DLEALPESIVQCRSLEQLDVSENKLMVLPDEIGDLEKLDDLTVAQN 254



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 125/265 (47%), Gaps = 51/265 (19%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  N+L  LPN IG L  L+ L V  N LE+LP++I  CRSLE+L+ + NKL  LPD 
Sbjct: 180 LDLGHNELDDLPNEIGMLENLEELYVDQNDLEALPESIVQCRSLEQLDVSENKLMVLPDE 239

Query: 76  IG-FELINLKTLSINC-----------------------------------------NKI 93
           IG  E ++  T++ NC                                         N +
Sbjct: 240 IGDLEKLDDLTVAQNCLQVLPRRLKKLSILKADRNAITQLTPAIGSCHALTEIYLTENLL 299

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
             +P SL +L SLR L+   N LK LP  +    +L VL++  N   +E LP  IG L +
Sbjct: 300 TEIPSSLGNLKSLRTLNLDKNQLKELPPTIGGCTSLSVLSLRDNL--IEQLPLEIGRLEN 357

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQ----GLSAVKGYLSEK 209
           L  LDV  N++  LP ++  L KL+ L L  N   +      EQ    G+  +  YL  +
Sbjct: 358 LRVLDVCNNRLNYLPFTVNVLFKLRALWLSENQSQAMLKLQTEQDPRTGIKVLTCYLLPQ 417

Query: 210 MNND--HKSPKKKSWVGK-LVKYGT 231
            N+    ++P  +S++G   V +G+
Sbjct: 418 SNSQLVEQAPPSRSFIGGPKVHFGS 442



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 101/189 (53%), Gaps = 5/189 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           AR L  + LD   N +K L   +    KLK+L +S N +  LP  I +   LEELN   N
Sbjct: 36  ARTLEEMYLDC--NHIKDLDKPLFRCRKLKILSLSENEVIRLPSDIAHLTYLEELNLKGN 93

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            +  LP+ I    I LK L ++ N I  LPQ++T LTS+  L      L  +P D+ +L 
Sbjct: 94  DVSDLPEEIK-NCIQLKILDLSSNPITRLPQTITQLTSMTSLGLNDISLTQMPHDIGHLR 152

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L + +N   L T+P SI  L  L  LD+ +N++  LP+ IG L  L++L ++ N L
Sbjct: 153 NLRSLEVRENL--LRTVPPSISELNQLRRLDLGHNELDDLPNEIGMLENLEELYVDQNDL 210

Query: 188 VSPPMDVVE 196
            + P  +V+
Sbjct: 211 EALPESIVQ 219



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 100/180 (55%), Gaps = 6/180 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L+V  N L+ +P SI  L++L+ LD+  N L+ LP  I    +LEEL  + N
Sbjct: 149 GHLRNLRSLEVRENLLRTVPPSISELNQLRRLDLGHNELDDLPNEIGMLENLEELYVDQN 208

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP++I  +  +L+ L ++ NK+++LP  +  L  L  L    NCL+ LP  L+   
Sbjct: 209 DLEALPESI-VQCRSLEQLDVSENKLMVLPDEIGDLEKLDDLTVAQNCLQVLPRRLK--- 264

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L +L   +N   +  L  +IG   +L E+ ++ N +T +P S+G L+ L+ L+L+ N L
Sbjct: 265 KLSILKADRN--AITQLTPAIGSCHALTEIYLTENLLTEIPSSLGNLKSLRTLNLDKNQL 322



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 97/175 (55%), Gaps = 5/175 (2%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIE-NCRSLEELNANFNKLRQLPDTIGFELI 81
             CLP    C  ++ +LD     L+S+P  I+ N R+LEE+  + N ++ L D   F   
Sbjct: 3   FSCLP-FFACNRQVDMLDRRQCNLQSIPHDIDRNARTLEEMYLDCNHIKDL-DKPLFRCR 60

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
            LK LS++ N+++ LP  + HLT L  L+ + N +  LPE+++N I L++L++S N   +
Sbjct: 61  KLKILSLSENEVIRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSN--PI 118

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
             LP +I  L S+  L ++   +T +P  IG LR L+ L +  N L + P  + E
Sbjct: 119 TRLPQTITQLTSMTSLGLNDISLTQMPHDIGHLRNLRSLEVRENLLRTVPPSISE 173



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 2/91 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP SL   L ++  L++  NQLK LP +IG  + L VL +  NL+E LP  I    +L  
Sbjct: 302 IPSSL-GNLKSLRTLNLDKNQLKELPPTIGGCTSLSVLSLRDNLIEQLPLEIGRLENLRV 360

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNK 92
           L+   N+L  LP T+   L  L+ L ++ N+
Sbjct: 361 LDVCNNRLNYLPFTVNV-LFKLRALWLSENQ 390


>gi|45657382|ref|YP_001468.1| hypothetical protein LIC11507 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45600621|gb|AAS70105.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 500

 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/189 (39%), Positives = 108/189 (57%), Gaps = 10/189 (5%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTI---ENCRSLEELNAN 65
           RL N+  L ++   L  LP  I  L  L+ L +  N L+SLPK I    N RSL+ + AN
Sbjct: 305 RLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLD-IGAN 363

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
            N+   LP  I   L NL++L +N N+  I P+ +  L  L +L+   N L +LPE +  
Sbjct: 364 -NEFEVLPKEIA-RLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 421

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L  L++L++S N   L TLP  IG L +L EL + YN+I TLP+ I  L+ L+KL+L  N
Sbjct: 422 LKGLQMLDLSHN--RLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYEN 479

Query: 186 PLVSPPMDV 194
           P+  PP ++
Sbjct: 480 PI--PPQEL 486



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 98/180 (54%), Gaps = 3/180 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV +LD+   +    P  I  L  L++L +  N +  LP+ I   ++L+EL  N NKL  
Sbjct: 50  NVRILDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTI 109

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           +P  I +EL NL  L +  N+I  LP+ +    +L+ LD R N L +LPE +  L  LE 
Sbjct: 110 VPKEI-WELENLTILRLENNRISTLPKEIEKSKNLQELDLRGNRLVTLPEGIGELKLLEE 168

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LN+      ++ LP  IG L +L   ++S NK+ ++P  IG L+ L+ L LE N L + P
Sbjct: 169 LNLEN--NRIKILPKEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLP 226



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 87/161 (54%), Gaps = 3/161 (1%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           S +++LD+S       PK I     LE L    N++  LP  I  +L NLK L +N NK+
Sbjct: 49  SNVRILDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREIN-KLKNLKELYLNGNKL 107

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
            I+P+ +  L +L +L    N + +LP+++E   NL+ L++  N   L TLP  IG L  
Sbjct: 108 TIVPKEIWELENLTILRLENNRISTLPKEIEKSKNLQELDLRGN--RLVTLPEGIGELKL 165

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L EL++  N+I  LP  IG L  L   +L GN L S P ++
Sbjct: 166 LEELNLENNRIKILPKEIGALENLWIFNLSGNKLASIPKEI 206



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 22/148 (14%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L ++ N+L  +P  I  L  L +L +  N + +LPK IE  ++L+EL+   N+
Sbjct: 93  KLKNLKELYLNGNKLTIVPKEIWELENLTILRLENNRISTLPKEIEKSKNLQELDLRGNR 152

Query: 69  LRQLPDTIGF----------------------ELINLKTLSINCNKIVILPQSLTHLTSL 106
           L  LP+ IG                        L NL   +++ NK+  +P+ + +L +L
Sbjct: 153 LVTLPEGIGELKLLEELNLENNRIKILPKEIGALENLWIFNLSGNKLASIPKEIGNLQNL 212

Query: 107 RVLDARLNCLKSLPEDLENLINLEVLNI 134
           R+L    N LK+LP  +E L +LEVLN+
Sbjct: 213 RMLYLENNQLKTLPRQMEKLQDLEVLNL 240



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 1/102 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ARL N+  L ++ N+ K  P  I  L KL +L+V+ N L++LP+ I   + L+ L+ + N
Sbjct: 374 ARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHN 433

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           +L  LP  IG +L NL  L +  N+I  LP+ +  L +LR L
Sbjct: 434 RLTTLPSEIG-QLHNLTELYLQYNRIKTLPEEIARLQNLRKL 474



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 111/242 (45%), Gaps = 50/242 (20%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLES---------LPKT 52
           IP+ +   L N+ +L + +NQLK LP  +  L  L+VL++  N L S         LP  
Sbjct: 202 IPKEI-GNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSKERKKIQALLPDC 260

Query: 53  IENCRSLEE------LNANFNK-LRQLPDTIGFE-----------LINLKTLSINCNKIV 94
             + R +EE      LN    + L+ L  ++ ++           L NL++LS+    +V
Sbjct: 261 DIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFPLFSKEILRLKNLRSLSLYDTSLV 320

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY-------------- 140
            LP+ +  L  L  L   LN LKSLP+++  L NL  L+I  N ++              
Sbjct: 321 ALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLR 380

Query: 141 --------LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
                    +  P  I  L  LV L+V+ N++  LP+ IG L+ LQ L L  N L + P 
Sbjct: 381 SLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPS 440

Query: 193 DV 194
           ++
Sbjct: 441 EI 442



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 3/94 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +V+L+V++NQL  LP  IG L  L++LD+S N L +LP  I    +L EL   +N+++ L
Sbjct: 402 LVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTL 461

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSL 106
           P+ I   L NL+ L++  N I   PQ L  +  L
Sbjct: 462 PEEIA-RLQNLRKLTLYENPIP--PQELDKIRKL 492



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 97/226 (42%), Gaps = 53/226 (23%)

Query: 22  QLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTI----G 77
           ++K LP  IG L  L + ++SGN L S+PK I N ++L  L    N+L+ LP  +     
Sbjct: 175 RIKILPKEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQD 234

Query: 78  FELINL----------------------------------------------KTLSINCN 91
            E++NL                                               +LS+   
Sbjct: 235 LEVLNLLINPLLSKERKKIQALLPDCDIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQ 294

Query: 92  KIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLL 151
           +  +  + +  L +LR L      L +LP+++  L +LE L++  N   L++LP  IGLL
Sbjct: 295 QFPLFSKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLN--QLKSLPKEIGLL 352

Query: 152 MSLVELDV-SYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
            +L  LD+ + N+   LP  I  L+ L+ L L  N     P ++ E
Sbjct: 353 RNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWE 398


>gi|45656719|ref|YP_000805.1| hypothetical protein LIC10828 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421084288|ref|ZP_15545151.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102963|ref|ZP_15563565.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599955|gb|AAS69442.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367278|gb|EKP22664.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410433188|gb|EKP77536.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 378

 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 107/184 (58%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL +   +LK LP  IG L  L++LD+S N L  LPK I   ++L+EL  N+N+L 
Sbjct: 47  LDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLT 106

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
             P  I  +L +L  L ++ N++ ILP  +  L +L+ L+   N LK++ +++E L NL+
Sbjct: 107 TFPKEIE-QLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQ 165

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +  N   L  L   IG L +L  L +S N++TT P  IG L+ LQ+L L  N L + 
Sbjct: 166 KLYLDNN--QLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTF 223

Query: 191 PMDV 194
           P ++
Sbjct: 224 PKEI 227



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 112/194 (57%), Gaps = 4/194 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++PE +  +L N+ +LD+  NQL  LP  I  L  L+ L ++ N L + PK IE  +SL 
Sbjct: 61  VLPEKI-GQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLH 119

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N+L  LP  IG +L NL+ L++  N++  + + +  L +L+ L    N L +L 
Sbjct: 120 KLYLSNNQLTILPVEIG-QLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALS 178

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++  L NL+ L +S N   L T P  IG L +L EL +S N++TT P  IG L+KLQ L
Sbjct: 179 KEIGKLQNLKSLFLSNN--QLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWL 236

Query: 181 SLEGNPLVSPPMDV 194
            L  N L + P ++
Sbjct: 237 GLGDNQLTTIPNEI 250



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 105/186 (56%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L + +NQL  L   IG L  LK L +S N L + PK I   ++L+EL  + N+
Sbjct: 160 QLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQ 219

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L   P  IG +L  L+ L +  N++  +P  +  L  L+ L+  +N L ++P+++  L N
Sbjct: 220 LTTFPKEIG-KLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQN 278

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+VL +S N    +T+P   G L +L  L +  N++T LP  IG L+ L+ L+L+ N L 
Sbjct: 279 LQVLFLSYN--QFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLT 336

Query: 189 SPPMDV 194
           + P ++
Sbjct: 337 TIPKEI 342



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/178 (34%), Positives = 100/178 (56%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + +NQL   P  IG L  L+ L +S N L + PK I   + L+ L    N
Sbjct: 182 GKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDN 241

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P+ IG +L  L+ L+++ N++  +P+ +  L +L+VL    N  K++P +   L 
Sbjct: 242 QLTTIPNEIG-KLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLK 300

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL++L++  N   L  LP  IG L +L  L++  N++TT+P  IG L+ LQ L L  N
Sbjct: 301 NLKMLSLDAN--QLTALPKEIGKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNN 356



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 102/187 (54%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++ +NQLK +   I  L  L+ L +  N L +L K I   ++L+ L  + N
Sbjct: 136 GQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNN 195

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L   P  IG +L NL+ L ++ N++   P+ +  L  L+ L    N L ++P ++  L 
Sbjct: 196 QLTTFPKEIG-KLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQ 254

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ LN+  N   L T+P  IG L +L  L +SYN+  T+P   G L+ L+ LSL+ N L
Sbjct: 255 KLQELNLDVN--QLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQL 312

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 313 TALPKEI 319



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 88/158 (55%), Gaps = 3/158 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + +NQL   P  IG L KL+ L +  N L ++P  I   + L+ELN + N
Sbjct: 205 GKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVN 264

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  IG +L NL+ L ++ N+   +P     L +L++L    N L +LP+++  L 
Sbjct: 265 QLTTIPKEIG-QLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLK 323

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
           NL++LN+  N   L T+P  IG L +L  L +  N+ +
Sbjct: 324 NLKMLNLDAN--QLTTIPKEIGQLQNLQTLYLRNNQFS 359



 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 2/94 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L N+ VL +  NQ K +P   G L  LK+L +  N L +LPK I   ++L+ 
Sbjct: 269 IPKEI-GQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKM 327

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           LN + N+L  +P  IG +L NL+TL +  N+  I
Sbjct: 328 LNLDANQLTTIPKEIG-QLQNLQTLYLRNNQFSI 360


>gi|298241193|ref|ZP_06965000.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
 gi|297554247|gb|EFH88111.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
          Length = 349

 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 114/207 (55%), Gaps = 5/207 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P  L  +L ++ +LD+  NQL+ +P  +G L  L +LD+SGN L  +P  +     LE+
Sbjct: 138 VPTEL-GQLRDLHMLDLSGNQLREVPAELGQLRDLHMLDLSGNQLREVPAELGQLSRLEK 196

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+LR++P  +G +L  L+ L ++ N++  +P  L  L  L+ LD   N L  +P 
Sbjct: 197 LYLAGNQLREVPAELG-QLRGLQELYLSGNQLREVPTELGQLRDLQELDLSGNQLTGIPT 255

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L  L+ L ++ N   L  +P  +G L  L  LD+S N++  +P  +G L +L    
Sbjct: 256 ELGQLCGLQDLYLAGN--QLREVPAELGQLRDLHMLDLSGNQLREVPAELGQLSRLHAFC 313

Query: 182 LEGN-PLVSPPMDVVEQGLSAVKGYLS 207
           +E N  L++PP ++V QG  A+  +L 
Sbjct: 314 IEDNDQLLTPPSEIVSQGTIAILTFLQ 340



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 107/193 (55%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P  L  +L ++  L +  NQL+ +P  +G L  L+ L +SGN L  +P  +   R L+E
Sbjct: 69  VPAEL-GQLRSLQELYLAGNQLREVPAELGQLRSLQELYLSGNQLTGIPTELGQLRGLQE 127

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+LR++P  +G +L +L  L ++ N++  +P  L  L  L +LD   N L+ +P 
Sbjct: 128 LYLSGNQLREVPTELG-QLRDLHMLDLSGNQLREVPAELGQLRDLHMLDLSGNQLREVPA 186

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L  LE L ++ N   L  +P  +G L  L EL +S N++  +P  +G LR LQ+L 
Sbjct: 187 ELGQLSRLEKLYLAGN--QLREVPAELGQLRGLQELYLSGNQLREVPTELGQLRDLQELD 244

Query: 182 LEGNPLVSPPMDV 194
           L GN L   P ++
Sbjct: 245 LSGNQLTGIPTEL 257



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 102/183 (55%), Gaps = 3/183 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N++ LD+    L  +P  +G L  L+ L + GN L  +P  +   RSL+EL    N+LR+
Sbjct: 32  NLITLDISDKGLTQVPAELGQLRSLQELYLFGNQLREVPAELGQLRSLQELYLAGNQLRE 91

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           +P  +G +L +L+ L ++ N++  +P  L  L  L+ L    N L+ +P +L  L +L +
Sbjct: 92  VPAELG-QLRSLQELYLSGNQLTGIPTELGQLRGLQELYLSGNQLREVPTELGQLRDLHM 150

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L++S N   L  +P  +G L  L  LD+S N++  +P  +G L +L+KL L GN L   P
Sbjct: 151 LDLSGN--QLREVPAELGQLRDLHMLDLSGNQLREVPAELGQLSRLEKLYLAGNQLREVP 208

Query: 192 MDV 194
            ++
Sbjct: 209 AEL 211



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 108/193 (55%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P  L  +L ++  L +  NQL+ +P  +G L  L+ L ++GN L  +P  +   RSL+E
Sbjct: 46  VPAEL-GQLRSLQELYLFGNQLREVPAELGQLRSLQELYLAGNQLREVPAELGQLRSLQE 104

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+L  +P  +G +L  L+ L ++ N++  +P  L  L  L +LD   N L+ +P 
Sbjct: 105 LYLSGNQLTGIPTELG-QLRGLQELYLSGNQLREVPTELGQLRDLHMLDLSGNQLREVPA 163

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L +L +L++S N   L  +P  +G L  L +L ++ N++  +P  +G LR LQ+L 
Sbjct: 164 ELGQLRDLHMLDLSGN--QLREVPAELGQLSRLEKLYLAGNQLREVPAELGQLRGLQELY 221

Query: 182 LEGNPLVSPPMDV 194
           L GN L   P ++
Sbjct: 222 LSGNQLREVPTEL 234



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 90/173 (52%), Gaps = 5/173 (2%)

Query: 24  KCLPNSIGC--LSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELI 81
           K +PN +    L  L  LD+S   L  +P  +   RSL+EL    N+LR++P  +G +L 
Sbjct: 19  KVIPNDVKYDDLGNLITLDISDKGLTQVPAELGQLRSLQELYLFGNQLREVPAELG-QLR 77

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           +L+ L +  N++  +P  L  L SL+ L    N L  +P +L  L  L+ L +S N   L
Sbjct: 78  SLQELYLAGNQLREVPAELGQLRSLQELYLSGNQLTGIPTELGQLRGLQELYLSGN--QL 135

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P  +G L  L  LD+S N++  +P  +G LR L  L L GN L   P ++
Sbjct: 136 REVPTELGQLRDLHMLDLSGNQLREVPAELGQLRDLHMLDLSGNQLREVPAEL 188


>gi|124007624|ref|ZP_01692328.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
 gi|123986922|gb|EAY26687.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
          Length = 440

 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +T +L+ +  LD+ +N ++ L   I  L +LK LD+ GN L  LP  +E    LEE
Sbjct: 79  LPDEVT-QLVTLQQLDLSNNNIEHLSQKIRQLKQLKKLDLQGNELAQLPPIVEQLTGLEE 137

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L   +N L QLP ++G  L  LK L ++ N +  LP ++  LTSL  L+   N L  L +
Sbjct: 138 LILGYNYLTQLPGSVG-NLTQLKVLEVHNNDLFRLPSTIGKLTSLIKLNLSYNQLSELSK 196

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
             ENL+NL+ LN+  N   L  LP +IG L +L +L +S N +  LP +I  L  L+ LS
Sbjct: 197 MTENLVNLQQLNLQHN--QLSQLPMAIGQLTALQKLVLSGNNMNVLPANIEQLTSLKHLS 254

Query: 182 LEGNPLVSPP 191
           L GN L   P
Sbjct: 255 LGGNTLEQLP 264



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 106/189 (56%), Gaps = 3/189 (1%)

Query: 6   LTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNAN 65
           +T  L+N+  L++  NQL  LP +IG L+ L+ L +SGN +  LP  IE   SL+ L+  
Sbjct: 197 MTENLVNLQQLNLQHNQLSQLPMAIGQLTALQKLVLSGNNMNVLPANIEQLTSLKHLSLG 256

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
            N L QLP TI  +L +L  L ++ N +  LP  + +L  L+ L+   N LK LP ++  
Sbjct: 257 GNTLEQLPPTI-CKLKSLTELFLDYNYLQQLPIEIKYLKHLQKLELSYNELKELPAEIGQ 315

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L  L+ LN+ QN   L  LP  IG L  L  L V  NK+T +P ++G L  LQ+  L  N
Sbjct: 316 LTQLKQLNLGQNL--LTKLPPEIGQLNCLENLWVYQNKLTNIPPTVGQLTALQRFMLSNN 373

Query: 186 PLVSPPMDV 194
            L S P+++
Sbjct: 374 QLTSLPIEI 382



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 110/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L  + VL+VH+N L  LP++IG L+ L  L++S N L  L K  EN  +L++LN   N
Sbjct: 153 GNLTQLKVLEVHNNDLFRLPSTIGKLTSLIKLNLSYNQLSELSKMTENLVNLQQLNLQHN 212

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L QLP  IG +L  L+ L ++ N + +LP ++  LTSL+ L    N L+ LP  +  L 
Sbjct: 213 QLSQLPMAIG-QLTALQKLVLSGNNMNVLPANIEQLTSLKHLSLGGNTLEQLPPTICKLK 271

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  L +  ++ YL+ LP  I  L  L +L++SYN++  LP  IG L +L++L+L  N L
Sbjct: 272 SLTELFL--DYNYLQQLPIEIKYLKHLQKLELSYNELKELPAEIGQLTQLKQLNLGQNLL 329

Query: 188 VSPPMDV 194
              P ++
Sbjct: 330 TKLPPEI 336



 Score = 43.5 bits (101), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 26/139 (18%)

Query: 56  CRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNC 115
           C++L   + +   L +LPD +  +L+ L+ L ++ N I  L Q +  L  L+ LD + N 
Sbjct: 63  CQTLIACDLSDKNLDRLPDEVT-QLVTLQQLDLSNNNIEHLSQKIRQLKQLKKLDLQGNE 121

Query: 116 LKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLR 175
           L  LP  +E L  LE                         EL + YN +T LP S+G L 
Sbjct: 122 LAQLPPIVEQLTGLE-------------------------ELILGYNYLTQLPGSVGNLT 156

Query: 176 KLQKLSLEGNPLVSPPMDV 194
           +L+ L +  N L   P  +
Sbjct: 157 QLKVLEVHNNDLFRLPSTI 175



 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQ 197
           L+ LP  +  L++L +LD+S N I  L   I  L++L+KL L+GN L   P  +VEQ
Sbjct: 76  LDRLPDEVTQLVTLQQLDLSNNNIEHLSQKIRQLKQLKKLDLQGNELAQLP-PIVEQ 131


>gi|126310265|ref|XP_001371328.1| PREDICTED: leucine-rich repeat-containing protein 1 [Monodelphis
           domestica]
          Length = 525

 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/216 (36%), Positives = 118/216 (54%), Gaps = 27/216 (12%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L V+   L+ LP +IG L  L  L++  NLL  LP+++   + L+E
Sbjct: 121 LPESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPESLTQLQRLKE 179

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N++  LP+TIG  LI+L+ L ++ N++  LPQ + +L +L  LD   N L+ LP+
Sbjct: 180 LDLGNNEIYNLPETIG-ALIHLEDLWLDGNQLAELPQEIGNLKNLLCLDVSENKLERLPD 238

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLM-----------------------SLVELD 158
           ++  L +L  L ISQN   LE LP  IG L                        SL EL 
Sbjct: 239 EISGLASLTDLVISQNL--LEVLPDGIGKLRKLSILKADQNRLVQLTEAVGECESLTELV 296

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           ++ N++ TLP SIG L+KL  L+ + N LVS P ++
Sbjct: 297 LTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI 332



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/193 (37%), Positives = 104/193 (53%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PESLT +L  +  LD+ +N++  LP +IG L  L+ L + GN L  LP+ I N ++L  
Sbjct: 167 LPESLT-QLQRLKELDLGNNEIYNLPETIGALIHLEDLWLDGNQLAELPQEIGNLKNLLC 225

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + NKL +LPD I   L +L  L I+ N + +LP  +  L  L +L A  N L  L E
Sbjct: 226 LDVSENKLERLPDEISG-LASLTDLVISQNLLEVLPDGIGKLRKLSILKADQNRLVQLTE 284

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +    +L  L +++N   L TLP SIG L  L  L+   NK+ +LP  IG    L   S
Sbjct: 285 AVGECESLTELVLTEN--QLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFS 342

Query: 182 LEGNPLVSPPMDV 194
           +  N L   P +V
Sbjct: 343 VRDNRLSRIPSEV 355



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 104/196 (53%), Gaps = 8/196 (4%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +    R L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L
Sbjct: 27  VPEEIYRYTRSLEELLLD--ANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQL 84

Query: 60  EELNANFNKL-RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKS 118
            EL+ + N++  ++P+   F   ++K   +       LP+S   L +L  L      L+S
Sbjct: 85  VELDVSRNEIPNEVPERKTF-CKSIKVSDLTEFFSFRLPESFPELQNLTCLSVNDISLQS 143

Query: 119 LPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQ 178
           LPE++ NL NL  L + +N   L  LP S+  L  L ELD+  N+I  LP++IG L  L+
Sbjct: 144 LPENIGNLYNLASLELRENL--LTYLPESLTQLQRLKELDLGNNEIYNLPETIGALIHLE 201

Query: 179 KLSLEGNPLVSPPMDV 194
            L L+GN L   P ++
Sbjct: 202 DLWLDGNQLAELPQEI 217



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 102/188 (54%), Gaps = 7/188 (3%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N++ LDV  N+L+ LP+ I  L+ L  L +S NLLE LP  I   R L  L A+ N+L
Sbjct: 220 LKNLLCLDVSENKLERLPDEISGLASLTDLVISQNLLEVLPDGIGKLRKLSILKADQNRL 279

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            QL + +G E  +L  L +  N+++ LP+S+  L  L  L+A  N L SLP+++    +L
Sbjct: 280 VQLTEAVG-ECESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSL 338

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN---P 186
            V ++  N   L  +P  +     L  LDV+ N++  LP S+  L KL+ L L  N   P
Sbjct: 339 TVFSVRDN--RLSRIPSEVSQATELHVLDVAGNRLLHLPLSLTNL-KLKALWLSDNQSQP 395

Query: 187 LVSPPMDV 194
           L++   D 
Sbjct: 396 LLTCQTDT 403



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 45/180 (25%)

Query: 57  RSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
           R +E ++     L  +P+ I     +L+ L ++ N++  LP+    L  LR L    N +
Sbjct: 12  RHVETIDKRHCSLVYVPEEIYRYTRSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 117 KSLPEDLENLINLEVLNISQN------------------------FQY------------ 140
           + LP ++ N + L  L++S+N                        F +            
Sbjct: 72  QRLPPEIANFMQLVELDVSRNEIPNEVPERKTFCKSIKVSDLTEFFSFRLPESFPELQNL 131

Query: 141 ---------LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
                    L++LP +IG L +L  L++  N +T LP+S+  L++L++L L  N + + P
Sbjct: 132 TCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPESLTQLQRLKELDLGNNEIYNLP 191


>gi|429962037|gb|ELA41581.1| hypothetical protein VICG_01329 [Vittaforma corneae ATCC 50505]
          Length = 425

 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L+N+  L + +N LK LP+ I  L  L+ L +S N  ++LP  I   ++L+EL+ + N
Sbjct: 140 GDLVNLKTLHLDNNNLKTLPSEIRRLVSLRKLYLSDNNFKTLPVEIGELKNLQELSLSGN 199

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL+ L   IG +L+NL+ L++N N+  +LP  +  L +L VL  R N L +LP ++  L 
Sbjct: 200 KLKALSAEIG-KLVNLQDLNLNGNEFELLPAEIGKLENLNVLYFRSNKLTTLPAEIRELK 258

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +  ++  LETLP  IG L +L  L  + NK+ +LP  IG L+ LQ L L  N L
Sbjct: 259 NLQYLYL--DYNKLETLPSDIGELKNLQYLHFNCNKLKSLPSEIGELKNLQYLDLRNNKL 316

Query: 188 VSPPMDV 194
              P ++
Sbjct: 317 KILPSEI 323



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 102/179 (56%), Gaps = 4/179 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L+N+  L+++ N+ + LP  IG L  L VL    N L +LP  I   ++L+ L  ++N
Sbjct: 209 GKLVNLQDLNLNGNEFELLPAEIGKLENLNVLYFRSNKLTTLPAEIRELKNLQYLYLDYN 268

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           KL  LP  IG EL NL+ L  NCNK+  LP  +  L +L+ LD R N LK LP ++  L 
Sbjct: 269 KLETLPSDIG-ELKNLQYLHFNCNKLKSLPSEIGELKNLQYLDLRNNKLKILPSEIGKLK 327

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLR-KLQKLSLEGN 185
              +L +  N   L TLP  IG L +L ELD+S N + TLP++I  L   LQ L L GN
Sbjct: 328 --NLLYLVLNNNELTTLPSEIGELENLGELDLSGNNLETLPNTIRKLSGSLQLLYLRGN 384



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 120/252 (47%), Gaps = 28/252 (11%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RL+++  L +  N  K LP  IG L  L+ L +SGN L++L   I    +L++LN N N+
Sbjct: 164 RLVSLRKLYLSDNNFKTLPVEIGELKNLQELSLSGNKLKALSAEIGKLVNLQDLNLNGNE 223

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
              LP  IG +L NL  L    NK+  LP  +  L +L+ L    N L++LP D+  L N
Sbjct: 224 FELLPAEIG-KLENLNVLYFRSNKLTTLPAEIRELKNLQYLYLDYNKLETLPSDIGELKN 282

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI-----------------------T 165
           L+ L+   N   L++LP  IG L +L  LD+  NK+                       T
Sbjct: 283 LQYLHF--NCNKLKSLPSEIGELKNLQYLDLRNNKLKILPSEIGKLKNLLYLVLNNNELT 340

Query: 166 TLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGK 225
           TLP  IG L  L +L L GN L + P  +  + LS     L  + NN  +  +K   +GK
Sbjct: 341 TLPSEIGELENLGELDLSGNNLETLPNTI--RKLSGSLQLLYLRGNNISEIGEKGRTLGK 398

Query: 226 LVKYGTFNGALR 237
               G F   ++
Sbjct: 399 KELRGIFGDCVK 410



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 95/171 (55%), Gaps = 3/171 (1%)

Query: 26  LPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKT 85
           + ++I  L KLK L +  N L+SLP  I +  +L+ L+ + N L+ LP  I   L++L+ 
Sbjct: 112 IDSNIKRLVKLKKLYLWNNNLKSLPPEIGDLVNLKTLHLDNNNLKTLPSEIR-RLVSLRK 170

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L ++ N    LP  +  L +L+ L    N LK+L  ++  L+NL+ LN++ N    E LP
Sbjct: 171 LYLSDNNFKTLPVEIGELKNLQELSLSGNKLKALSAEIGKLVNLQDLNLNGN--EFELLP 228

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
             IG L +L  L    NK+TTLP  I  L+ LQ L L+ N L + P D+ E
Sbjct: 229 AEIGKLENLNVLYFRSNKLTTLPAEIRELKNLQYLYLDYNKLETLPSDIGE 279



 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 82/151 (54%), Gaps = 3/151 (1%)

Query: 46  LESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTS 105
           + S+   I+    L++L    N L+ LP  IG +L+NLKTL ++ N +  LP  +  L S
Sbjct: 109 ITSIDSNIKRLVKLKKLYLWNNNLKSLPPEIG-DLVNLKTLHLDNNNLKTLPSEIRRLVS 167

Query: 106 LRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
           LR L    N  K+LP ++  L NL+ L++S N   L+ L   IG L++L +L+++ N+  
Sbjct: 168 LRKLYLSDNNFKTLPVEIGELKNLQELSLSGN--KLKALSAEIGKLVNLQDLNLNGNEFE 225

Query: 166 TLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
            LP  IG L  L  L    N L + P ++ E
Sbjct: 226 LLPAEIGKLENLNVLYFRSNKLTTLPAEIRE 256



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 61/106 (57%), Gaps = 2/106 (1%)

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           N   +SI    I  +  ++  L  L+ L    N LKSLP ++ +L+NL+ L++  N   L
Sbjct: 98  NETKVSIPFQGITSIDSNIKRLVKLKKLYLWNNNLKSLPPEIGDLVNLKTLHLDNN--NL 155

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +TLP  I  L+SL +L +S N   TLP  IG L+ LQ+LSL GN L
Sbjct: 156 KTLPSEIRRLVSLRKLYLSDNNFKTLPVEIGELKNLQELSLSGNKL 201


>gi|260788624|ref|XP_002589349.1| hypothetical protein BRAFLDRAFT_77802 [Branchiostoma floridae]
 gi|229274526|gb|EEN45360.1| hypothetical protein BRAFLDRAFT_77802 [Branchiostoma floridae]
          Length = 1364

 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 123/284 (43%), Gaps = 50/284 (17%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-------- 53
           IPE +   + ++ VLDV +N+L  +P +IG L KL  L   GN+L SLP+ I        
Sbjct: 416 IPEEV-FDITDLEVLDVSNNELTSIPEAIGRLHKLSRLHADGNMLTSLPQAIASMLELTH 474

Query: 54  ---------------ENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ 98
                          E  + L  L  N N+LR++P  +   L NL+ L +  N +   P 
Sbjct: 475 LFINDNKLSTFPPGVEKLQKLAHLFMNDNQLREVPPGV-CSLPNLEVLCVRSNNLSTFPP 533

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLM------ 152
            +  L  LR L    N L  +P  L +L NLEV  +  N   L TLP  +  L+      
Sbjct: 534 GVEKLQKLRELYIHDNQLTEVPPGLCSLSNLEVFIVINN--ELSTLPPGMSQLLKLREIL 591

Query: 153 -----------------SLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
                            ++ ELD+  N IT LP ++    KL+ L + GNPL  PP DV 
Sbjct: 592 LGNNKFDTFPEVLCELPAMEELDIRNNNITRLPTALHRADKLKDLDVSGNPLTYPPQDVC 651

Query: 196 EQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGALRNH 239
           +QG  A+  +L ++   +     +    G      T +  +R+ 
Sbjct: 652 KQGTGAIMAFLKQEAEKEGTKKARPEEKGSAAGKATEDAKVRHE 695



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 115/226 (50%), Gaps = 26/226 (11%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+ +LDV +N+L   P  +  L KL+ L ++ N L   P  + +  +L  LN + N +
Sbjct: 172 LPNLELLDVDNNKLSTFPPGVEKLQKLRELYINDNQLTEAPSGVCSLPNLAVLNVSNNPI 231

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           R+LPD +  +L  LKTLS+   +    P+ +  L +L VL A       +P+++ +L +L
Sbjct: 232 RRLPDDV-TQLTRLKTLSVRGCQFDEFPRQVLQLKTLVVLYAGGCKFDIVPDEVGSLQHL 290

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVE-----------------------LDVSYNKITT 166
           +VL + +N   L TLP ++  + +L E                       LD+S N IT 
Sbjct: 291 QVLALDKNL--LRTLPSTMSHMHNLREVYLHGNKFNTFPEVLCELPAMEKLDISNNNITR 348

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNN 212
           LP ++    KL+ L + GNPL  PP DV EQG  A+  +L +K  N
Sbjct: 349 LPTALHRADKLEVLDVSGNPLTYPPHDVCEQGTGAILAFLKQKAEN 394



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 20/206 (9%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L  +VVL     +   +P+ +G L  L+VL +  NLL +LP T+ +  +L E+  + NK
Sbjct: 263 QLKTLVVLYAGGCKFDIVPDEVGSLQHLQVLALDKNLLRTLPSTMSHMHNLREVYLHGNK 322

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDL----- 123
               P+ +  EL  ++ L I+ N I  LP +L     L VLD   N L   P D+     
Sbjct: 323 FNTFPEVL-CELPAMEKLDISNNNITRLPTALHRADKLEVLDVSGNPLTYPPHDVCEQGT 381

Query: 124 --------ENLINLEV------LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPD 169
                   +   NL++      L +    Q L ++P  +  +  L  LDVS N++T++P+
Sbjct: 382 GAILAFLKQKAENLQLQTVRGCLQVDLTDQGLTSIPEEVFDITDLEVLDVSNNELTSIPE 441

Query: 170 SIGCLRKLQKLSLEGNPLVSPPMDVV 195
           +IG L KL +L  +GN L S P  + 
Sbjct: 442 AIGRLHKLSRLHADGNMLTSLPQAIA 467



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 98/193 (50%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE +   + ++ VLDV  N+L  +P +IG L KL  L   GN+L SL + I + + L  
Sbjct: 27  IPEEV-FDITDLEVLDVSKNKLTSIPEAIGRLRKLSRLHADGNMLTSLQQAIGSLQKLTH 85

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  N NKL  LP  I  +L  L  LSI  N++  +P  +  L +L  L    N L +   
Sbjct: 86  LYVNRNKLTNLPPGIE-KLQKLTLLSICGNQLTEVPSGIYLLPNLEFLVVSNNKLTAFNP 144

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +E L  L  L I+ N   L  +P  +  L +L  LDV  NK++T P  +  L+KL++L 
Sbjct: 145 GVEKLKKLRKLFINGN--QLTEVPAGVCSLPNLELLDVDNNKLSTFPPGVEKLQKLRELY 202

Query: 182 LEGNPLVSPPMDV 194
           +  N L   P  V
Sbjct: 203 INDNQLTEAPSGV 215



 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 22/210 (10%)

Query: 5   SLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNA 64
           S  + + N+  + +H N+    P  +  L  ++ LD+S N +  LP  +     LE L+ 
Sbjct: 305 STMSHMHNLREVYLHGNKFNTFPEVLCELPAMEKLDISNNNITRLPTALHRADKLEVLDV 364

Query: 65  NFNKLRQLPDTI-----GFELINLKTLSIN--------CNKIVILPQSLT-------HLT 104
           + N L   P  +     G  L  LK  + N        C ++ +  Q LT        +T
Sbjct: 365 SGNPLTYPPHDVCEQGTGAILAFLKQKAENLQLQTVRGCLQVDLTDQGLTSIPEEVFDIT 424

Query: 105 SLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
            L VLD   N L S+PE +  L  L  L+   N   L +LP +I  ++ L  L ++ NK+
Sbjct: 425 DLEVLDVSNNELTSIPEAIGRLHKLSRLHADGNM--LTSLPQAIASMLELTHLFINDNKL 482

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +T P  +  L+KL  L +  N L   P  V
Sbjct: 483 STFPPGVEKLQKLAHLFMNDNQLREVPPGV 512



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 6/96 (6%)

Query: 97  PQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVE 156
           PQ++  L +L   D     L S+PE++ ++ +LEVL++S+N   L ++P +IG L  L  
Sbjct: 8   PQTVNGLLTL---DLSNQGLTSIPEEVFDITDLEVLDVSKN--KLTSIPEAIGRLRKLSR 62

Query: 157 LDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS-PP 191
           L    N +T+L  +IG L+KL  L +  N L + PP
Sbjct: 63  LHADGNMLTSLQQAIGSLQKLTHLYVNRNKLTNLPP 98


>gi|397497382|ref|XP_003819490.1| PREDICTED: protein scribble homolog isoform 2 [Pan paniscus]
          Length = 1608

 Score = 97.8 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 108/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 28  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 87

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 88  LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 145

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 146 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 203

Query: 188 VSPPMD 193
              P +
Sbjct: 204 EELPAE 209



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 69/202 (34%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 159 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLT 217

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N LR+LPD IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 218 DLLLSQNLLRRLPDGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALP 276

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 277 RSLGKLTKLTNLNVDRN--HLEALPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVL 334

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 335 DVAGNRLQSLPFALTHLNLKAL 356



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 50  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 109

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 110 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 168

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 169 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 207



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 104/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 91  LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 149

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 150 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPA 208

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L+ L  L +SQN   L  LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 209 ELGGLVLLTDLLLSQNL--LRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 266

Query: 182 LEGNPLVSPP 191
           L  N L++ P
Sbjct: 267 LTENLLMALP 276



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 121 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 180

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LP+ +  L  L
Sbjct: 181 SALPPELG-NLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL 239

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
            +L + QN   L  +  +IG   +L EL ++ N +  LP S+G L KL  L+++ N L +
Sbjct: 240 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEA 297

Query: 190 PPMDV 194
            P ++
Sbjct: 298 LPPEI 302



 Score = 67.4 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 47/136 (34%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP+++     L  
Sbjct: 229 LPDGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTN 287

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++ +LP  L H   L VLD   N L+SLP 
Sbjct: 288 LNVDRNHLEALPPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPF 346

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 347 ALTHL-NLKALWLAEN 361



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 48/160 (30%)

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLN----------------------- 114
           F L+NL+ L ++ N+I  LP  + +   L  LD   N                       
Sbjct: 27  FRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGN 86

Query: 115 -----------------------CLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLL 151
                                   L++LP D+ NL NL  L + +N   L++LP S+  L
Sbjct: 87  PLSRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENL--LKSLPASLSFL 144

Query: 152 MSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           + L +LD+  N +  LPD++G L  L++L L+ N L + P
Sbjct: 145 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALP 184


>gi|410042296|ref|XP_003951408.1| PREDICTED: protein scribble homolog isoform 2 [Pan troglodytes]
          Length = 1608

 Score = 97.8 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 108/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 28  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 87

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 88  LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 145

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 146 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 203

Query: 188 VSPPMD 193
              P +
Sbjct: 204 EELPAE 209



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 69/202 (34%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 159 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLT 217

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N LR+LPD IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 218 DLLLSQNLLRRLPDGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALP 276

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 277 RSLGKLTKLTNLNVDRN--HLEALPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVL 334

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 335 DVAGNRLQSLPFALTHLNLKAL 356



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 50  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 109

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 110 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 168

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 169 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 207



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 104/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 91  LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 149

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 150 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPA 208

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L+ L  L +SQN   L  LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 209 ELGGLVLLTDLLLSQNL--LRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 266

Query: 182 LEGNPLVSPP 191
           L  N L++ P
Sbjct: 267 LTENLLMALP 276



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 121 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 180

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LP+ +  L  L
Sbjct: 181 SALPPELG-NLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL 239

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
            +L + QN   L  +  +IG   +L EL ++ N +  LP S+G L KL  L+++ N L +
Sbjct: 240 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEA 297

Query: 190 PPMDV 194
            P ++
Sbjct: 298 LPPEI 302



 Score = 67.4 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 47/136 (34%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP+++     L  
Sbjct: 229 LPDGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTN 287

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++ +LP  L H   L VLD   N L+SLP 
Sbjct: 288 LNVDRNHLEALPPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPF 346

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 347 ALTHL-NLKALWLAEN 361



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 48/160 (30%)

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLN----------------------- 114
           F L+NL+ L ++ N+I  LP  + +   L  LD   N                       
Sbjct: 27  FRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGN 86

Query: 115 -----------------------CLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLL 151
                                   L++LP D+ NL NL  L + +N   L++LP S+  L
Sbjct: 87  PLSRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENL--LKSLPASLSFL 144

Query: 152 MSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           + L +LD+  N +  LPD++G L  L++L L+ N L + P
Sbjct: 145 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALP 184


>gi|312080118|ref|XP_003142464.1| PDZ-domain-containing protein scribble [Loa loa]
          Length = 1215

 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 97/178 (54%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A L  +  L++  N +  LP  I    +LK+LD+S N +  LP TI    S+  L  N  
Sbjct: 80  AHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPPTISQLTSMTSLGLNDI 139

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L Q+P  IG +L NL++L +  N +  +P S++ L  LR LD   N L  LP ++  L 
Sbjct: 140 SLTQMPHDIG-QLRNLRSLEVRENLLRTVPPSISQLKQLRRLDLGHNELDDLPNEISMLE 198

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NLE L + QN   LE LP SI    SL +LDVS NK+  LPD IG L KL  L++  N
Sbjct: 199 NLEELYVDQN--DLEALPESIVQCRSLEQLDVSENKLMLLPDEIGDLEKLDDLTVSQN 254



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 98/189 (51%), Gaps = 5/189 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           AR L  + LD   N +K L   +    KLK+L +S N +  LP  I +   LEELN   N
Sbjct: 36  ARTLEEMYLDC--NHIKDLDKPLFRCRKLKILSLSENEVIRLPSDIAHLTYLEELNLKGN 93

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            +  LP+ I    I LK L ++ N I  LP +++ LTS+  L      L  +P D+  L 
Sbjct: 94  DVSDLPEEIK-NCIQLKILDLSSNPITRLPPTISQLTSMTSLGLNDISLTQMPHDIGQLR 152

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L + +N   L T+P SI  L  L  LD+ +N++  LP+ I  L  L++L ++ N L
Sbjct: 153 NLRSLEVRENL--LRTVPPSISQLKQLRRLDLGHNELDDLPNEISMLENLEELYVDQNDL 210

Query: 188 VSPPMDVVE 196
            + P  +V+
Sbjct: 211 EALPESIVQ 219



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 109/189 (57%), Gaps = 7/189 (3%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P S++ +L  +  LD+  N+L  LPN I  L  L+ L V  N LE+LP++I  CRSLE+
Sbjct: 167 VPPSIS-QLKQLRRLDLGHNELDDLPNEISMLENLEELYVDQNDLEALPESIVQCRSLEQ 225

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSL--THLTSLRVLDARLNCLKSL 119
           L+ + NKL  LPD IG +L  L  L+++ N + +LP S+   HL SL +L+A    +  L
Sbjct: 226 LDVSENKLMLLPDEIG-DLEKLDDLTVSQNCLQVLPSSIGNNHLRSLSLLEALFLGITML 284

Query: 120 PEDLEN-LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQ 178
              +   L  L +L   +N   +  L  +IG   +L E+ ++ N +T +P S+G L+ L+
Sbjct: 285 YFPITGRLKKLSMLKADRN--AITQLTPAIGSCHALTEIYLTENLLTEIPSSLGNLKSLR 342

Query: 179 KLSLEGNPL 187
            L+L+ N L
Sbjct: 343 TLNLDKNQL 351



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 97/175 (55%), Gaps = 5/175 (2%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIE-NCRSLEELNANFNKLRQLPDTIGFELI 81
             CLP    C  ++ +LD     L+S+P  I+ N R+LEE+  + N ++ L D   F   
Sbjct: 3   FSCLP-FFACNRQVDMLDRRQCNLQSIPHDIDRNARTLEEMYLDCNHIKDL-DKPLFRCR 60

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
            LK LS++ N+++ LP  + HLT L  L+ + N +  LPE+++N I L++L++S N   +
Sbjct: 61  KLKILSLSENEVIRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSN--PI 118

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
             LP +I  L S+  L ++   +T +P  IG LR L+ L +  N L + P  + +
Sbjct: 119 TRLPPTISQLTSMTSLGLNDISLTQMPHDIGQLRNLRSLEVRENLLRTVPPSISQ 173



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 70/132 (53%), Gaps = 1/132 (0%)

Query: 6   LTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNAN 65
           +T RL  + +L    N +  L  +IG    L  + ++ NLL  +P ++ N +SL  LN +
Sbjct: 288 ITGRLKKLSMLKADRNAITQLTPAIGSCHALTEIYLTENLLTEIPSSLGNLKSLRTLNLD 347

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
            N+L++LP TIG    +L  LS+  N I  LP  +  L +LRVLD   N L  LP  +  
Sbjct: 348 KNQLKELPPTIG-GCTSLSVLSLRDNLIEQLPLEIGRLENLRVLDVCNNRLNYLPFTVNV 406

Query: 126 LINLEVLNISQN 137
           L  L  L +S+N
Sbjct: 407 LFKLRALWLSEN 418



 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 2/91 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP SL   L ++  L++  NQLK LP +IG  + L VL +  NL+E LP  I    +L  
Sbjct: 331 IPSSL-GNLKSLRTLNLDKNQLKELPPTIGGCTSLSVLSLRDNLIEQLPLEIGRLENLRV 389

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNK 92
           L+   N+L  LP T+   L  L+ L ++ N+
Sbjct: 390 LDVCNNRLNYLPFTVNV-LFKLRALWLSENQ 419


>gi|148697571|gb|EDL29518.1| scribbled homolog (Drosophila), isoform CRA_e [Mus musculus]
          Length = 1646

 Score = 97.8 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 109/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 116

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 117 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 174

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 175 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 188 VSPPMD 193
              P++
Sbjct: 233 EELPVE 238



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 65/193 (33%), Positives = 106/193 (54%), Gaps = 7/193 (3%)

Query: 1   MIPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRS 58
           ++PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   
Sbjct: 26  VVPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQ 83

Query: 59  LEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKS 118
           L EL+ + N + ++P++I F    L+    + N +  LP   T L SL  L      L++
Sbjct: 84  LVELDVSRNDIPEIPESIKF-CKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 119 LPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQ 178
           LP D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L+
Sbjct: 143 LPGDVGNLANLVTLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLR 200

Query: 179 KLSLEGNPLVSPP 191
           +L L+ N L + P
Sbjct: 201 ELWLDRNQLSALP 213



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 71/183 (38%), Positives = 100/183 (54%), Gaps = 4/183 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 150 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 209

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LPE +  L  L
Sbjct: 210 SALPPELG-NLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL 268

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL-V 188
            +L + QN   L  +  +IG   +L EL ++ N +T LP S+G L KL  L+++ N L V
Sbjct: 269 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEV 326

Query: 189 SPP 191
            PP
Sbjct: 327 LPP 329



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 139 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 198 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 236



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 120 LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 179 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPV 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L  L  L +SQN   L+ LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 238 ELGGLALLTDLLLSQNL--LQRLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 295

Query: 182 LEGNPLVSPP 191
           L  N L + P
Sbjct: 296 LTENLLTALP 305



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 188 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLT 246

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N L++LP+ IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 247 DLLLSQNLLQRLPEGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALP 305

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 306 HSLGKLTKLTNLNVDRN--HLEVLPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVL 363

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 364 DVAGNRLRSLPFALTHLNLKAL 385



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 48/136 (35%), Positives = 73/136 (53%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP ++     L  
Sbjct: 258 LPEGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTN 316

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++ +LP  L H   L VLD   N L+SLP 
Sbjct: 317 LNVDRNHLEVLPPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPF 375

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 376 ALTHL-NLKALWLAEN 390



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           LKC+P    C   ++ +D     L+ +P+ I    RSLEEL  + N+LR+LP    F L+
Sbjct: 2   LKCIP-LWRCNRHVESVDKRHCSLQVVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLL 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I                       + LP ++ N + L  L++S+N   +
Sbjct: 60  NLRKLGLSDNEI-----------------------QRLPPEVANFMQLVELDVSRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P SI    +L   D S N ++ LPD    LR L  L+L    L + P DV
Sbjct: 95  PEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDV 147


>gi|20373163|ref|NP_598850.1| protein scribble homolog [Mus musculus]
 gi|16974785|gb|AAL32469.1|AF441233_1 PDZ-domain protein scribble [Mus musculus]
 gi|148697572|gb|EDL29519.1| scribbled homolog (Drosophila), isoform CRA_f [Mus musculus]
          Length = 1665

 Score = 97.8 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 109/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 116

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 117 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 174

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 175 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 188 VSPPMD 193
              P++
Sbjct: 233 EELPVE 238



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 65/193 (33%), Positives = 106/193 (54%), Gaps = 7/193 (3%)

Query: 1   MIPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRS 58
           ++PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   
Sbjct: 26  VVPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQ 83

Query: 59  LEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKS 118
           L EL+ + N + ++P++I F    L+    + N +  LP   T L SL  L      L++
Sbjct: 84  LVELDVSRNDIPEIPESIKF-CKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 119 LPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQ 178
           LP D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L+
Sbjct: 143 LPGDVGNLANLVTLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLR 200

Query: 179 KLSLEGNPLVSPP 191
           +L L+ N L + P
Sbjct: 201 ELWLDRNQLSALP 213



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 71/183 (38%), Positives = 100/183 (54%), Gaps = 4/183 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 150 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 209

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LPE +  L  L
Sbjct: 210 SALPPELG-NLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL 268

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL-V 188
            +L + QN   L  +  +IG   +L EL ++ N +T LP S+G L KL  L+++ N L V
Sbjct: 269 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEV 326

Query: 189 SPP 191
            PP
Sbjct: 327 LPP 329



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 139 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 198 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 236



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 120 LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 179 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPV 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L  L  L +SQN   L+ LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 238 ELGGLALLTDLLLSQNL--LQRLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 295

Query: 182 LEGNPLVSPP 191
           L  N L + P
Sbjct: 296 LTENLLTALP 305



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 188 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLT 246

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N L++LP+ IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 247 DLLLSQNLLQRLPEGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALP 305

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 306 HSLGKLTKLTNLNVDRN--HLEVLPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVL 363

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 364 DVAGNRLRSLPFALTHLNLKAL 385



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 48/136 (35%), Positives = 73/136 (53%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP ++     L  
Sbjct: 258 LPEGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTN 316

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++ +LP  L H   L VLD   N L+SLP 
Sbjct: 317 LNVDRNHLEVLPPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPF 375

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 376 ALTHL-NLKALWLAEN 390



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           LKC+P    C   ++ +D     L+ +P+ I    RSLEEL  + N+LR+LP    F L+
Sbjct: 2   LKCIP-LWRCNRHVESVDKRHCSLQVVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLL 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I                       + LP ++ N + L  L++S+N   +
Sbjct: 60  NLRKLGLSDNEI-----------------------QRLPPEVANFMQLVELDVSRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P SI    +L   D S N ++ LPD    LR L  L+L    L + P DV
Sbjct: 95  PEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDV 147


>gi|418706359|ref|ZP_13267207.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410763984|gb|EKR34703.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 246

 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 105/196 (53%), Gaps = 3/196 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V  LD+ +  L  L   IG L  L+ L +S N   +LPK I   ++L+ L+ N N+L  
Sbjct: 54  DVRQLDLAAKGLTTLLKEIGKLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTT 113

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP+ I  +   L+ L ++ N++  LPQ +T L +L +L    N L +LPE++  L +L+ 
Sbjct: 114 LPEEIA-QFQKLQWLRLDNNQLANLPQEITQLQNLELLFLSGNRLTTLPEEIAQLRSLQR 172

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N     T P  I  L  L  LD+  N++TTLP  IG L+ LQ L L+GNP+VS  
Sbjct: 173 LYVYGN--RFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGQLQNLQTLILKGNPIVSKE 230

Query: 192 MDVVEQGLSAVKGYLS 207
              ++Q L     Y  
Sbjct: 231 RQRIQQLLPKCTIYFE 246



 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 2/101 (1%)

Query: 96  LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           L ++L +   +R LD     L +L +++  L NL+ L +S  F    TLP  I  L +L 
Sbjct: 45  LTEALQNPKDVRQLDLAAKGLTTLLKEIGKLRNLQRLQLS--FNQFTTLPKEIWQLQNLQ 102

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
            LD++ N++TTLP+ I   +KLQ L L+ N L + P ++ +
Sbjct: 103 HLDLNDNRLTTLPEEIAQFQKLQWLRLDNNQLANLPQEITQ 143


>gi|341884210|gb|EGT40145.1| hypothetical protein CAEBREN_23247 [Caenorhabditis brenneri]
          Length = 559

 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 107/186 (57%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
            L  +  L ++ N+L CLP  IG L  LK L +S N L SLP ++ +  SLE L+   NK
Sbjct: 94  ELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNK 153

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L ++P  I +++ +L+TL +  N+IV + + + +L  L++LD R N ++ LP  +  L +
Sbjct: 154 LTEVPPVI-YKITSLETLWLRYNRIVAVDEQIGNLVKLKMLDVRENKIRELPSAIGKLTS 212

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L V  +S N  +L  +P  IG   SL +LD+ +N ++ LP SIG L  L ++ +  N + 
Sbjct: 213 LVVCLVSYN--HLTRVPEEIGECQSLTQLDLQHNDLSELPYSIGKLTSLVRIGIRYNKIR 270

Query: 189 SPPMDV 194
             P ++
Sbjct: 271 CIPSEL 276



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 64/180 (35%), Positives = 97/180 (53%), Gaps = 3/180 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L+N+  L +  N L  LP+S+  L  L+ LD+  N L  +P  I    SLE L   +N
Sbjct: 116 GQLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVPPVIYKITSLETLWLRYN 175

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           ++  + + IG  L+ LK L +  NKI  LP ++  LTSL V     N L  +PE++    
Sbjct: 176 RIVAVDEQIG-NLVKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGECQ 234

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  L++  N   L  LPYSIG L SLV + + YNKI  +P  +   ++L++  +E N L
Sbjct: 235 SLTQLDLQHN--DLSELPYSIGKLTSLVRIGIRYNKIRCIPSELENCQQLEEFIVESNHL 292



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 110/262 (41%), Gaps = 70/262 (26%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +     ++  LD+  N L  LP SIG L+ L  + +  N +  +P  +ENC+ LEE
Sbjct: 226 VPEEI-GECQSLTQLDLQHNDLSELPYSIGKLTSLVRIGIRYNKIRCIPSELENCQQLEE 284

Query: 62  ------------------------------------------------LNANFNKLRQLP 73
                                                           +N   N++ ++P
Sbjct: 285 FIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIP 344

Query: 74  DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLN 133
             I  +   L  L++  N++V LP  +   TS+  L+   N LK LPED+E L+NLE+L 
Sbjct: 345 IGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILV 404

Query: 134 ISQN---------------------FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
           +S N                        LET+P  IG L  L +L V  NKI +LP SIG
Sbjct: 405 LSNNQLKKLPNQIGNLKKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKIVSLPRSIG 464

Query: 173 CLRKLQKLSLEGNPLVSPPMDV 194
            L  LQ L L  N L + P ++
Sbjct: 465 NLCSLQDLRLGENNLTAIPEEI 486



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/179 (35%), Positives = 89/179 (49%), Gaps = 26/179 (14%)

Query: 39  LDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ 98
           LD+S   + S+P  I+    L EL    NKL  LP  IG +L+NLK L ++ N +  LP 
Sbjct: 78  LDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIG-QLVNLKKLGLSENALTSLPD 136

Query: 99  SLTHLTSLRVLDARLNCLKSLP-----------------------EDLENLINLEVLNIS 135
           SL  L SL  LD R N L  +P                       E + NL+ L++L++ 
Sbjct: 137 SLASLESLETLDLRHNKLTEVPPVIYKITSLETLWLRYNRIVAVDEQIGNLVKLKMLDVR 196

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +N   +  LP +IG L SLV   VSYN +T +P+ IG  + L +L L+ N L   P  +
Sbjct: 197 EN--KIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGECQSLTQLDLQHNDLSELPYSI 253



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 100/176 (56%), Gaps = 5/176 (2%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           ++  L++ +NQLK LP  I  L  L++L +S N L+ LP  I N + L EL+   N+L  
Sbjct: 376 SITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLKKLRELDLEENELET 435

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           +P  IGF L +L  L +  NKIV LP+S+ +L SL+ L    N L ++PE++ +L +L+ 
Sbjct: 436 VPTEIGF-LQHLTKLWVQSNKIVSLPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKS 494

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI---GCLRKLQKLSLEG 184
           L ++ N   L  LP+ + L  SL  + +  + ++ +P  I   G    +Q L ++G
Sbjct: 495 LYLNDN-SSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQG 549



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 94/219 (42%), Gaps = 35/219 (15%)

Query: 5   SLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNA 64
           S   +L ++VV  V  N L  +P  IG    L  LD+  N L  LP +I    SL  +  
Sbjct: 205 SAIGKLTSLVVCLVSYNHLTRVPEEIGECQSLTQLDLQHNDLSELPYSIGKLTSLVRIGI 264

Query: 65  NFNKLRQLPDTIGFELINLKTLS---INCNKIVILPQS-LTHLTSLRVLDARLNCLKSLP 120
            +NK+R +P     EL N + L    +  N + +LP + LT L  +  ++   N L + P
Sbjct: 265 RYNKIRCIPS----ELENCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFP 320

Query: 121 EDLEN------LINLE-------------------VLNISQNFQYLETLPYSIGLLMSLV 155
                       IN+E                    LN+ +N   L +LP  +G   S+ 
Sbjct: 321 AGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKEN--ELVSLPLDMGSWTSIT 378

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           EL++S N++  LP+ I  L  L+ L L  N L   P  +
Sbjct: 379 ELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQI 417


>gi|427791781|gb|JAA61342.1| Putative cytoskeletal regulator flightless-i, partial
           [Rhipicephalus pulchellus]
          Length = 956

 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 109/193 (56%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE  T +LLN+  L ++   L+ LP + G LSKLK+L++  N L+ LPK++     L  
Sbjct: 119 LPEGFT-QLLNIEQLYLNDTFLEYLPANFGRLSKLKILELRENHLKVLPKSMARLTELSR 177

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N   +LP+ IG  L +L  L  + N++  LP  + HL  L  LDA  N +  + +
Sbjct: 178 LDIGQNDFTELPEVIG-SLPSLTELWCDSNRLTSLPSYMGHLIKLTYLDASRNRISFIAD 236

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++EN+  L  L ++ N   L+ +P ++G L +L  L +  N + TLPDSIG L KL++L 
Sbjct: 237 EIENMTMLSDLTLTTN--KLQKIPETLGFLQNLTTLRLDDNHLATLPDSIGQLSKLEELI 294

Query: 182 LEGNPLVSPPMDV 194
           +  N + S P  +
Sbjct: 295 INSNEIDSLPSTI 307



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 96/179 (53%), Gaps = 3/179 (1%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN+L  LP+ +G L KL  LD S N +  +   IEN   L +L    NKL+++P+T+GF 
Sbjct: 205 SNRLTSLPSYMGHLIKLTYLDASRNRISFIADEIENMTMLSDLTLTTNKLQKIPETLGF- 263

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL TL ++ N +  LP S+  L+ L  L    N + SLP  +  L NL +L    N  
Sbjct: 264 LQNLTTLRLDDNHLATLPDSIGQLSKLEELIINSNEIDSLPSTIGLLRNLTLLMADDNL- 322

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQG 198
            LE LP  IG    L  L +  N++  +PD +G L  L+ ++L GN L   P+ + + G
Sbjct: 323 -LEDLPPEIGSCSKLRVLSLRDNRLCNVPDELGHLSSLRVVNLSGNQLRHLPVSLAKLG 380



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/136 (42%), Positives = 79/136 (58%), Gaps = 2/136 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE+L   L N+  L +  N L  LP+SIG LSKL+ L ++ N ++SLP TI   R+L  
Sbjct: 257 IPETL-GFLQNLTTLRLDDNHLATLPDSIGQLSKLEELIINSNEIDSLPSTIGLLRNLTL 315

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L A+ N L  LP  IG     L+ LS+  N++  +P  L HL+SLRV++   N L+ LP 
Sbjct: 316 LMADDNLLEDLPPEIG-SCSKLRVLSLRDNRLCNVPDELGHLSSLRVVNLSGNQLRHLPV 374

Query: 122 DLENLINLEVLNISQN 137
            L  L  L  L +SQN
Sbjct: 375 SLAKLGGLHALWLSQN 390



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/192 (33%), Positives = 101/192 (52%), Gaps = 24/192 (12%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +++NQ+K LP  +     L+ L++S N +++LP  + +  SLEEL+ + N + ++PD 
Sbjct: 40  LYLNANQIKDLPRPLFHCHGLRKLNLSDNDIQTLPPALSSLISLEELDISKNNVIEIPDN 99

Query: 76  I---------------------GF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL 113
           I                     GF +L+N++ L +N   +  LP +   L+ L++L+ R 
Sbjct: 100 IKGCKCLSIVEASVNPVGKLPEGFTQLLNIEQLYLNDTFLEYLPANFGRLSKLKILELRE 159

Query: 114 NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGC 173
           N LK LP+ +  L  L  L+I QN  + E LP  IG L SL EL    N++T+LP  +G 
Sbjct: 160 NHLKVLPKSMARLTELSRLDIGQN-DFTE-LPEVIGSLPSLTELWCDSNRLTSLPSYMGH 217

Query: 174 LRKLQKLSLEGN 185
           L KL  L    N
Sbjct: 218 LIKLTYLDASRN 229



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 100/201 (49%), Gaps = 23/201 (11%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V VLD   + L+ +P+ +    + L+ L ++ N ++ LP+ + +C  L +LN + N ++ 
Sbjct: 13  VRVLDYAHHGLEDVPSEVFNYERTLEELYLNANQIKDLPRPLFHCHGLRKLNLSDNDIQT 72

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  +   LI+L+ L I+ N ++ +P ++     L +++A +N +  LPE    L+N+E 
Sbjct: 73  LPPALS-SLISLEELDISKNNVIEIPDNIKGCKCLSIVEASVNPVGKLPEGFTQLLNIEQ 131

Query: 132 LNISQNF---------------------QYLETLPYSIGLLMSLVELDVSYNKITTLPDS 170
           L ++  F                      +L+ LP S+  L  L  LD+  N  T LP+ 
Sbjct: 132 LYLNDTFLEYLPANFGRLSKLKILELRENHLKVLPKSMARLTELSRLDIGQNDFTELPEV 191

Query: 171 IGCLRKLQKLSLEGNPLVSPP 191
           IG L  L +L  + N L S P
Sbjct: 192 IGSLPSLTELWCDSNRLTSLP 212



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/152 (36%), Positives = 83/152 (54%), Gaps = 3/152 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L + +N+L+ +P ++G L  L  L +  N L +LP +I     LEEL  N N++  LP T
Sbjct: 247 LTLTTNKLQKIPETLGFLQNLTTLRLDDNHLATLPDSIGQLSKLEELIINSNEIDSLPST 306

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L NL  L  + N +  LP  +   + LRVL  R N L ++P++L +L +L V+N+S
Sbjct: 307 IGL-LRNLTLLMADDNLLEDLPPEIGSCSKLRVLSLRDNRLCNVPDELGHLSSLRVVNLS 365

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
            N   L  LP S+  L  L  L +S N+   L
Sbjct: 366 GN--QLRHLPVSLAKLGGLHALWLSQNQTKPL 395


>gi|38566048|gb|AAH62888.1| Scrib protein [Mus musculus]
          Length = 1612

 Score = 97.8 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 109/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 116

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 117 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 174

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 175 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 188 VSPPMD 193
              P++
Sbjct: 233 EELPVE 238



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 65/193 (33%), Positives = 106/193 (54%), Gaps = 7/193 (3%)

Query: 1   MIPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRS 58
           ++PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   
Sbjct: 26  VVPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQ 83

Query: 59  LEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKS 118
           L EL+ + N + ++P++I F    L+    + N +  LP   T L SL  L      L++
Sbjct: 84  LVELDVSRNDIPEIPESIKF-CKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 119 LPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQ 178
           LP D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L+
Sbjct: 143 LPGDVGNLANLVTLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLR 200

Query: 179 KLSLEGNPLVSPP 191
           +L L+ N L + P
Sbjct: 201 ELWLDRNQLSALP 213



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 71/183 (38%), Positives = 100/183 (54%), Gaps = 4/183 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 150 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 209

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LPE +  L  L
Sbjct: 210 SALPPELG-NLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL 268

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL-V 188
            +L + QN   L  +  +IG   +L EL ++ N +T LP S+G L KL  L+++ N L V
Sbjct: 269 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEV 326

Query: 189 SPP 191
            PP
Sbjct: 327 LPP 329



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 139 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 198 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 236



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 120 LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 179 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPV 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L  L  L +SQN   L+ LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 238 ELGGLALLTDLLLSQNL--LQRLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 295

Query: 182 LEGNPLVSPP 191
           L  N L + P
Sbjct: 296 LTENLLTALP 305



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 188 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLT 246

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N L++LP+ IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 247 DLLLSQNLLQRLPEGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALP 305

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 306 HSLGKLTKLTNLNVDRN--HLEVLPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVL 363

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 364 DVAGNRLRSLPFALTHLNLKAL 385



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 48/136 (35%), Positives = 73/136 (53%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP ++     L  
Sbjct: 258 LPEGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTN 316

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++ +LP  L H   L VLD   N L+SLP 
Sbjct: 317 LNVDRNHLEVLPPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPF 375

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 376 ALTHL-NLKALWLAEN 390



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           LKC+P    C   ++ +D     L+ +P+ I    RSLEEL  + N+LR+LP    F L+
Sbjct: 2   LKCIP-LWRCNRHVESVDKRHCSLQVVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLL 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I                       + LP ++ N + L  L++S+N   +
Sbjct: 60  NLRKLGLSDNEI-----------------------QRLPPEVANFMQLVELDVSRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P SI    +L   D S N ++ LPD    LR L  L+L    L + P DV
Sbjct: 95  PEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDV 147


>gi|50400983|sp|Q80U72.2|SCRIB_MOUSE RecName: Full=Protein scribble homolog; Short=Scribble; AltName:
           Full=Protein LAP4
          Length = 1612

 Score = 97.8 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 109/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 116

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 117 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 174

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 175 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 188 VSPPMD 193
              P++
Sbjct: 233 EELPVE 238



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 65/193 (33%), Positives = 106/193 (54%), Gaps = 7/193 (3%)

Query: 1   MIPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRS 58
           ++PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   
Sbjct: 26  VVPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQ 83

Query: 59  LEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKS 118
           L EL+ + N + ++P++I F    L+    + N +  LP   T L SL  L      L++
Sbjct: 84  LVELDVSRNDIPEIPESIKF-CKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 119 LPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQ 178
           LP D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L+
Sbjct: 143 LPGDVGNLANLVTLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLR 200

Query: 179 KLSLEGNPLVSPP 191
           +L L+ N L + P
Sbjct: 201 ELWLDRNQLSALP 213



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 71/183 (38%), Positives = 100/183 (54%), Gaps = 4/183 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 150 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 209

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LPE +  L  L
Sbjct: 210 SALPPELG-NLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL 268

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL-V 188
            +L + QN   L  +  +IG   +L EL ++ N +T LP S+G L KL  L+++ N L V
Sbjct: 269 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEV 326

Query: 189 SPP 191
            PP
Sbjct: 327 LPP 329



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 139 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 198 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 236



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 120 LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 179 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPV 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L  L  L +SQN   L+ LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 238 ELGGLALLTDLLLSQNL--LQRLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 295

Query: 182 LEGNPLVSPP 191
           L  N L + P
Sbjct: 296 LTENLLTALP 305



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 188 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLT 246

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N L++LP+ IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 247 DLLLSQNLLQRLPEGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALP 305

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 306 HSLGKLTKLTNLNVDRN--HLEVLPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVL 363

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 364 DVAGNRLRSLPFALTHLNLKAL 385



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 48/136 (35%), Positives = 73/136 (53%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP ++     L  
Sbjct: 258 LPEGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTN 316

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++ +LP  L H   L VLD   N L+SLP 
Sbjct: 317 LNVDRNHLEVLPPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPF 375

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 376 ALTHL-NLKALWLAEN 390



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           LKC+P    C   ++ +D     L+ +P+ I    RSLEEL  + N+LR+LP    F L+
Sbjct: 2   LKCIP-LWRCNRHVESVDKRHCSLQVVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLL 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I                       + LP ++ N + L  L++S+N   +
Sbjct: 60  NLRKLGLSDNEI-----------------------QRLPPEVANFMQLVELDVSRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P SI    +L   D S N ++ LPD    LR L  L+L    L + P DV
Sbjct: 95  PEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDV 147


>gi|148697567|gb|EDL29514.1| scribbled homolog (Drosophila), isoform CRA_a [Mus musculus]
          Length = 1637

 Score = 97.8 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 109/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 116

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 117 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 174

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 175 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 188 VSPPMD 193
              P++
Sbjct: 233 EELPVE 238



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 65/193 (33%), Positives = 106/193 (54%), Gaps = 7/193 (3%)

Query: 1   MIPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRS 58
           ++PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   
Sbjct: 26  VVPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQ 83

Query: 59  LEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKS 118
           L EL+ + N + ++P++I F    L+    + N +  LP   T L SL  L      L++
Sbjct: 84  LVELDVSRNDIPEIPESIKF-CKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 119 LPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQ 178
           LP D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L+
Sbjct: 143 LPGDVGNLANLVTLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLR 200

Query: 179 KLSLEGNPLVSPP 191
           +L L+ N L + P
Sbjct: 201 ELWLDRNQLSALP 213



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 71/183 (38%), Positives = 100/183 (54%), Gaps = 4/183 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 150 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 209

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LPE +  L  L
Sbjct: 210 SALPPELG-NLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL 268

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL-V 188
            +L + QN   L  +  +IG   +L EL ++ N +T LP S+G L KL  L+++ N L V
Sbjct: 269 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEV 326

Query: 189 SPP 191
            PP
Sbjct: 327 LPP 329



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 139 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 198 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 236



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 120 LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 179 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPV 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L  L  L +SQN   L+ LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 238 ELGGLALLTDLLLSQNL--LQRLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 295

Query: 182 LEGNPLVSPP 191
           L  N L + P
Sbjct: 296 LTENLLTALP 305



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 188 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLT 246

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N L++LP+ IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 247 DLLLSQNLLQRLPEGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALP 305

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 306 HSLGKLTKLTNLNVDRN--HLEVLPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVL 363

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 364 DVAGNRLRSLPFALTHLNLKAL 385



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 48/136 (35%), Positives = 73/136 (53%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP ++     L  
Sbjct: 258 LPEGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTN 316

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++ +LP  L H   L VLD   N L+SLP 
Sbjct: 317 LNVDRNHLEVLPPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPF 375

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 376 ALTHL-NLKALWLAEN 390



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           LKC+P    C   ++ +D     L+ +P+ I    RSLEEL  + N+LR+LP    F L+
Sbjct: 2   LKCIP-LWRCNRHVESVDKRHCSLQVVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLL 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I                       + LP ++ N + L  L++S+N   +
Sbjct: 60  NLRKLGLSDNEI-----------------------QRLPPEVANFMQLVELDVSRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P SI    +L   D S N ++ LPD    LR L  L+L    L + P DV
Sbjct: 95  PEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDV 147


>gi|455789506|gb|EMF41432.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 358

 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 107/184 (58%), Gaps = 3/184 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L+V VL +   +LK LP  IG L  L++LD+S N L  LPK I   ++L+EL  N+N+L 
Sbjct: 27  LDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLT 86

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
             P  I  +L +L  L ++ N++ ILP  +  L +L+ L+   N LK++ +++E L NL+
Sbjct: 87  TFPKEIE-QLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQ 145

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L +  N   L  L   IG L +L  L +S N++TT P  IG L+ LQ+L L  N L + 
Sbjct: 146 KLYLDNN--QLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTF 203

Query: 191 PMDV 194
           P ++
Sbjct: 204 PKEI 207



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 112/194 (57%), Gaps = 4/194 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++PE +  +L N+ +LD+  NQL  LP  I  L  L+ L ++ N L + PK IE  +SL 
Sbjct: 41  VLPEKI-GQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLH 99

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N+L  LP  IG +L NL+ L++  N++  + + +  L +L+ L    N L +L 
Sbjct: 100 KLYLSNNQLTILPVEIG-QLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALS 158

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           +++  L NL+ L +S N   L T P  IG L +L EL +S N++TT P  IG L+KLQ L
Sbjct: 159 KEIGKLQNLKSLFLSNN--QLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWL 216

Query: 181 SLEGNPLVSPPMDV 194
            L  N L + P ++
Sbjct: 217 GLGDNQLTTIPNEI 230



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 105/186 (56%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L + +NQL  L   IG L  LK L +S N L + PK I   ++L+EL  + N+
Sbjct: 140 QLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQ 199

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L   P  IG +L  L+ L +  N++  +P  +  L  L+ L+  +N L ++P+++  L N
Sbjct: 200 LTTFPKEIG-KLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQN 258

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+VL +S N    +T+P   G L +L  L +  N++T LP  IG L+ L+ L+L+ N L 
Sbjct: 259 LQVLFLSYN--QFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLT 316

Query: 189 SPPMDV 194
           + P ++
Sbjct: 317 TIPKEI 322



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 102/187 (54%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L++ +NQLK +   I  L  L+ L +  N L +L K I   ++L+ L  + N
Sbjct: 116 GQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNN 175

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L   P  IG +L NL+ L ++ N++   P+ +  L  L+ L    N L ++P ++  L 
Sbjct: 176 QLTTFPKEIG-KLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQ 234

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ LN+  N   L T+P  IG L +L  L +SYN+  T+P   G L+ L+ LSL+ N L
Sbjct: 235 KLQELNLDVN--QLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQL 292

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 293 TALPKEI 299



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 89/158 (56%), Gaps = 3/158 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L + +NQL   P  IG L KL+ L +  N L ++P  I   + L+ELN + N
Sbjct: 185 GKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVN 244

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  IG +L NL+ L ++ N+   +P     L +L++L    N L +LP+++  L 
Sbjct: 245 QLTTIPKEIG-QLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLK 303

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
           NL++LN+  N   L T+P  IG L +L  L +  N+++
Sbjct: 304 NLKMLNLDAN--QLTTIPKEIGQLQNLQTLYLRNNQLS 339



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 2/94 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +  +L N+ VL +  NQ K +P   G L  LK+L +  N L +LPK I   ++L+ 
Sbjct: 249 IPKEI-GQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKM 307

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
           LN + N+L  +P  IG +L NL+TL +  N++ I
Sbjct: 308 LNLDANQLTTIPKEIG-QLQNLQTLYLRNNQLSI 340


>gi|410042294|ref|XP_003951407.1| PREDICTED: protein scribble homolog isoform 1 [Pan troglodytes]
 gi|410257936|gb|JAA16935.1| scribbled homolog [Pan troglodytes]
          Length = 1637

 Score = 97.8 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 108/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 116

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 117 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 174

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 175 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 188 VSPPMD 193
              P +
Sbjct: 233 EELPAE 238



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 7/192 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   L
Sbjct: 27  VPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP   T L SL  L      L++L
Sbjct: 85  VELDVSRNDIPEIPESIKF-CKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L++
Sbjct: 144 PGDVGNLANLVTLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRE 201

Query: 180 LSLEGNPLVSPP 191
           L L+ N L + P
Sbjct: 202 LWLDRNQLSALP 213



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 69/202 (34%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 188 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLT 246

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N LR+LPD IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 247 DLLLSQNLLRRLPDGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALP 305

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 306 RSLGKLTKLTNLNVDRN--HLEALPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVL 363

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 364 DVAGNRLQSLPFALTHLNLKAL 385



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 139 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 198 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 236



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 104/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 120 LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 179 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPA 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L+ L  L +SQN   L  LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 238 ELGGLVLLTDLLLSQNL--LRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 295

Query: 182 LEGNPLVSPP 191
           L  N L++ P
Sbjct: 296 LTENLLMALP 305



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 150 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 209

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LP+ +  L  L
Sbjct: 210 SALPPELG-NLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL 268

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
            +L + QN   L  +  +IG   +L EL ++ N +  LP S+G L KL  L+++ N L +
Sbjct: 269 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEA 326

Query: 190 PPMDV 194
            P ++
Sbjct: 327 LPPEI 331



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 47/136 (34%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP+++     L  
Sbjct: 258 LPDGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTN 316

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++ +LP  L H   L VLD   N L+SLP 
Sbjct: 317 LNVDRNHLEALPPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPF 375

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 376 ALTHL-NLKALWLAEN 390



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           LKC+P    C   ++ +D     L+++P+ I    RSLEEL  + N+LR+LP    F L+
Sbjct: 2   LKCIP-LWRCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLL 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I                       + LP ++ N + L  L++S+N   +
Sbjct: 60  NLRKLGLSDNEI-----------------------QRLPPEVANFMQLVELDVSRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P SI    +L   D S N ++ LPD    LR L  L+L    L + P DV
Sbjct: 95  PEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDV 147


>gi|397497384|ref|XP_003819491.1| PREDICTED: protein scribble homolog isoform 3 [Pan paniscus]
          Length = 1662

 Score = 97.8 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 108/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 116

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 117 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 174

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 175 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 188 VSPPMD 193
              P +
Sbjct: 233 EELPAE 238



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 7/192 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   L
Sbjct: 27  VPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP   T L SL  L      L++L
Sbjct: 85  VELDVSRNDIPEIPESIKF-CKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L++
Sbjct: 144 PGDVGNLANLVTLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRE 201

Query: 180 LSLEGNPLVSPP 191
           L L+ N L + P
Sbjct: 202 LWLDRNQLSALP 213



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 69/202 (34%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 188 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLT 246

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N LR+LPD IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 247 DLLLSQNLLRRLPDGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALP 305

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 306 RSLGKLTKLTNLNVDRN--HLEALPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVL 363

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 364 DVAGNRLQSLPFALTHLNLKAL 385



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 139 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 198 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 236



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 104/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 120 LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 179 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPA 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L+ L  L +SQN   L  LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 238 ELGGLVLLTDLLLSQNL--LRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 295

Query: 182 LEGNPLVSPP 191
           L  N L++ P
Sbjct: 296 LTENLLMALP 305



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 150 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 209

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LP+ +  L  L
Sbjct: 210 SALPPELG-NLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL 268

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
            +L + QN   L  +  +IG   +L EL ++ N +  LP S+G L KL  L+++ N L +
Sbjct: 269 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEA 326

Query: 190 PPMDV 194
            P ++
Sbjct: 327 LPPEI 331



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 47/136 (34%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP+++     L  
Sbjct: 258 LPDGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTN 316

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++ +LP  L H   L VLD   N L+SLP 
Sbjct: 317 LNVDRNHLEALPPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPF 375

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 376 ALTHL-NLKALWLAEN 390



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           LKC+P    C   ++ +D     L+++P+ I    RSLEEL  + N+LR+LP    F L+
Sbjct: 2   LKCIP-LWRCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLL 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I                       + LP ++ N + L  L++S+N   +
Sbjct: 60  NLRKLGLSDNEI-----------------------QRLPPEVANFMQLVELDVSRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P SI    +L   D S N ++ LPD    LR L  L+L    L + P DV
Sbjct: 95  PEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDV 147


>gi|410042298|ref|XP_003951409.1| PREDICTED: protein scribble homolog isoform 3 [Pan troglodytes]
 gi|410257938|gb|JAA16936.1| scribbled homolog [Pan troglodytes]
          Length = 1662

 Score = 97.8 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 108/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 116

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 117 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 174

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 175 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 188 VSPPMD 193
              P +
Sbjct: 233 EELPAE 238



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 7/192 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   L
Sbjct: 27  VPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP   T L SL  L      L++L
Sbjct: 85  VELDVSRNDIPEIPESIKF-CKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L++
Sbjct: 144 PGDVGNLANLVTLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRE 201

Query: 180 LSLEGNPLVSPP 191
           L L+ N L + P
Sbjct: 202 LWLDRNQLSALP 213



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 69/202 (34%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 188 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLT 246

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N LR+LPD IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 247 DLLLSQNLLRRLPDGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALP 305

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 306 RSLGKLTKLTNLNVDRN--HLEALPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVL 363

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 364 DVAGNRLQSLPFALTHLNLKAL 385



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 139 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 198 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 236



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 104/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 120 LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 179 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPA 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L+ L  L +SQN   L  LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 238 ELGGLVLLTDLLLSQNL--LRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 295

Query: 182 LEGNPLVSPP 191
           L  N L++ P
Sbjct: 296 LTENLLMALP 305



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 150 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 209

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LP+ +  L  L
Sbjct: 210 SALPPELG-NLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL 268

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
            +L + QN   L  +  +IG   +L EL ++ N +  LP S+G L KL  L+++ N L +
Sbjct: 269 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEA 326

Query: 190 PPMDV 194
            P ++
Sbjct: 327 LPPEI 331



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 47/136 (34%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP+++     L  
Sbjct: 258 LPDGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTN 316

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++ +LP  L H   L VLD   N L+SLP 
Sbjct: 317 LNVDRNHLEALPPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPF 375

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 376 ALTHL-NLKALWLAEN 390



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           LKC+P    C   ++ +D     L+++P+ I    RSLEEL  + N+LR+LP    F L+
Sbjct: 2   LKCIP-LWRCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLL 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I                       + LP ++ N + L  L++S+N   +
Sbjct: 60  NLRKLGLSDNEI-----------------------QRLPPEVANFMQLVELDVSRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P SI    +L   D S N ++ LPD    LR L  L+L    L + P DV
Sbjct: 95  PEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDV 147


>gi|148921804|gb|AAI46322.1| Scribbled homolog (Drosophila) [synthetic construct]
          Length = 1655

 Score = 97.8 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 108/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 116

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 117 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 174

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 175 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 188 VSPPMD 193
              P +
Sbjct: 233 EELPAE 238



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 7/192 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   L
Sbjct: 27  VPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP   T L SL  L      L++L
Sbjct: 85  VELDVSRNDIPEIPESIKF-CKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L++
Sbjct: 144 PGDVGNLANLVTLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRE 201

Query: 180 LSLEGNPLVSPP 191
           L L+ N L + P
Sbjct: 202 LWLDRNQLSALP 213



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 69/202 (34%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 188 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLT 246

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N LR+LPD IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 247 DLLLSQNLLRRLPDGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALP 305

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 306 RSLGKLTKLTNLNVDRN--HLEALPPEIGGCVALSVLSLRDNRLAVLPPELAHTTELHVL 363

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 364 DVAGNRLQSLPFALTHLNLKAL 385



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 139 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 198 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 236



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 104/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 120 LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 179 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPA 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L+ L  L +SQN   L  LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 238 ELGGLVLLTDLLLSQNL--LRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 295

Query: 182 LEGNPLVSPP 191
           L  N L++ P
Sbjct: 296 LTENLLMALP 305



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 150 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 209

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LP+ +  L  L
Sbjct: 210 SALPPELG-NLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL 268

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
            +L + QN   L  +  +IG   +L EL ++ N +  LP S+G L KL  L+++ N L +
Sbjct: 269 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEA 326

Query: 190 PPMDV 194
            P ++
Sbjct: 327 LPPEI 331



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP+++     L  
Sbjct: 258 LPDGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTN 316

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++ +LP  L H T L VLD   N L+SLP 
Sbjct: 317 LNVDRNHLEALPPEIG-GCVALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSLPF 375

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 376 ALTHL-NLKALWLAEN 390



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           LKC+P    C   ++ +D     L+++P+ I    RSLEEL  + N+LR+LP    F L+
Sbjct: 2   LKCIP-LWRCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLL 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I                       + LP ++ N + L  L++S+N   +
Sbjct: 60  NLRKLGLSDNEI-----------------------QRLPPEVANFMQLVELDVSRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P SI    +L   D S N ++ LPD    LR L  L+L    L + P DV
Sbjct: 95  PEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDV 147


>gi|355390313|ref|NP_874365.3| protein scribble homolog isoform a [Homo sapiens]
          Length = 1655

 Score = 97.8 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 108/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 116

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 117 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 174

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 175 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 188 VSPPMD 193
              P +
Sbjct: 233 EELPAE 238



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 7/192 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   L
Sbjct: 27  VPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP   T L SL  L      L++L
Sbjct: 85  VELDVSRNDIPEIPESIKF-CKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L++
Sbjct: 144 PGDVGNLANLVTLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRE 201

Query: 180 LSLEGNPLVSPP 191
           L L+ N L + P
Sbjct: 202 LWLDRNQLSALP 213



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 69/202 (34%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 188 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLT 246

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N LR+LPD IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 247 DLLLSQNLLRRLPDGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALP 305

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 306 RSLGKLTKLTNLNVDRN--HLEALPPEIGGCVALSVLSLRDNRLAVLPPELAHTTELHVL 363

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 364 DVAGNRLQSLPFALTHLNLKAL 385



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 139 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 198 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 236



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 104/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 120 LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 179 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPA 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L+ L  L +SQN   L  LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 238 ELGGLVLLTDLLLSQNL--LRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 295

Query: 182 LEGNPLVSPP 191
           L  N L++ P
Sbjct: 296 LTENLLMALP 305



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 150 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 209

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LP+ +  L  L
Sbjct: 210 SALPPELG-NLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL 268

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
            +L + QN   L  +  +IG   +L EL ++ N +  LP S+G L KL  L+++ N L +
Sbjct: 269 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEA 326

Query: 190 PPMDV 194
            P ++
Sbjct: 327 LPPEI 331



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP+++     L  
Sbjct: 258 LPDGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTN 316

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++ +LP  L H T L VLD   N L+SLP 
Sbjct: 317 LNVDRNHLEALPPEIG-GCVALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSLPF 375

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 376 ALTHL-NLKALWLAEN 390



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           LKC+P    C   ++ +D     L+++P+ I    RSLEEL  + N+LR+LP    F L+
Sbjct: 2   LKCIP-LWRCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLL 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I                       + LP ++ N + L  L++S+N   +
Sbjct: 60  NLRKLGLSDNEI-----------------------QRLPPEVANFMQLVELDVSRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P SI    +L   D S N ++ LPD    LR L  L+L    L + P DV
Sbjct: 95  PEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDV 147


>gi|421087858|ref|ZP_15548693.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102791|ref|ZP_15563395.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410367905|gb|EKP23289.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410429599|gb|EKP73975.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 488

 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/189 (39%), Positives = 108/189 (57%), Gaps = 10/189 (5%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTI---ENCRSLEELNAN 65
           RL N+  L ++   L  LP  I  L  L+ L +  N L+SLPK I    N RSL+ + AN
Sbjct: 293 RLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLD-IGAN 351

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
            N+   LP  I   L NL++L +N N+  I P+ +  L  L +L+   N L +LPE +  
Sbjct: 352 -NEFEVLPKEIA-RLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 409

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L  L++L++S N   L TLP  IG L +L EL + YN+I TLP+ I  L+ L+KL+L  N
Sbjct: 410 LKGLQMLDLSHN--RLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYEN 467

Query: 186 PLVSPPMDV 194
           P+  PP ++
Sbjct: 468 PI--PPQEL 474



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 3/180 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV +LD+   +    P  I  L  L++L +  N +  LP+ I   ++L+EL  N NKL  
Sbjct: 38  NVRILDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTI 97

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           +P  I +EL NL  L +  N+I  LP+ +    +L+ LD R N L +LPE +       +
Sbjct: 98  VPKEI-WELENLTILRLENNRISTLPKEIEKSKNLQELDLRGNRLVTLPEGIG--ELKLL 154

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
             ++     ++ LP  IG L +L   ++S NK+ ++P  IG L+ L+ L LE N L + P
Sbjct: 155 EELNLENNRIKILPKEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLP 214



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 87/161 (54%), Gaps = 3/161 (1%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           S +++LD+S       PK I     LE L    N++  LP  I  +L NLK L +N NK+
Sbjct: 37  SNVRILDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREIN-KLKNLKELYLNGNKL 95

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
            I+P+ +  L +L +L    N + +LP+++E   NL+ L++  N   L TLP  IG L  
Sbjct: 96  TIVPKEIWELENLTILRLENNRISTLPKEIEKSKNLQELDLRGN--RLVTLPEGIGELKL 153

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L EL++  N+I  LP  IG L  L   +L GN L S P ++
Sbjct: 154 LEELNLENNRIKILPKEIGALENLWIFNLSGNKLASIPKEI 194



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 22/148 (14%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L ++ N+L  +P  I  L  L +L +  N + +LPK IE  ++L+EL+   N+
Sbjct: 81  KLKNLKELYLNGNKLTIVPKEIWELENLTILRLENNRISTLPKEIEKSKNLQELDLRGNR 140

Query: 69  LRQLPDTIGF----------------------ELINLKTLSINCNKIVILPQSLTHLTSL 106
           L  LP+ IG                        L NL   +++ NK+  +P+ + +L +L
Sbjct: 141 LVTLPEGIGELKLLEELNLENNRIKILPKEIGALENLWIFNLSGNKLASIPKEIGNLQNL 200

Query: 107 RVLDARLNCLKSLPEDLENLINLEVLNI 134
           R+L    N LK+LP  +E L +LEVLN+
Sbjct: 201 RMLYLENNQLKTLPRQMEKLQDLEVLNL 228



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 1/102 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ARL N+  L ++ N+ K  P  I  L KL +L+V+ N L++LP+ I   + L+ L+ + N
Sbjct: 362 ARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHN 421

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           +L  LP  IG +L NL  L +  N+I  LP+ +  L +LR L
Sbjct: 422 RLTTLPSEIG-QLHNLTELYLQYNRIKTLPEEIARLQNLRKL 462



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 111/242 (45%), Gaps = 50/242 (20%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLES---------LPKT 52
           IP+ +   L N+ +L + +NQLK LP  +  L  L+VL++  N L S         LP  
Sbjct: 190 IPKEI-GNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSKERKKIQALLPDC 248

Query: 53  IENCRSLEE------LNANFNK-LRQLPDTIGFE-----------LINLKTLSINCNKIV 94
             + R +EE      LN    + L+ L  ++ ++           L NL++LS+    +V
Sbjct: 249 DIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFPLFSKEILRLKNLRSLSLYDTSLV 308

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY-------------- 140
            LP+ +  L  L  L   LN LKSLP+++  L NL  L+I  N ++              
Sbjct: 309 ALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLR 368

Query: 141 --------LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
                    +  P  I  L  LV L+V+ N++  LP+ IG L+ LQ L L  N L + P 
Sbjct: 369 SLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPS 428

Query: 193 DV 194
           ++
Sbjct: 429 EI 430



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 3/94 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +V+L+V++NQL  LP  IG L  L++LD+S N L +LP  I    +L EL   +N+++ L
Sbjct: 390 LVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTL 449

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSL 106
           P+ I   L NL+ L++  N I   PQ L  +  L
Sbjct: 450 PEEIA-RLQNLRKLTLYENPIP--PQELDKIRKL 480



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 97/226 (42%), Gaps = 53/226 (23%)

Query: 22  QLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTI----G 77
           ++K LP  IG L  L + ++SGN L S+PK I N ++L  L    N+L+ LP  +     
Sbjct: 163 RIKILPKEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQD 222

Query: 78  FELINL----------------------------------------------KTLSINCN 91
            E++NL                                               +LS+   
Sbjct: 223 LEVLNLLINPLLSKERKKIQALLPDCDIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQ 282

Query: 92  KIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLL 151
           +  +  + +  L +LR L      L +LP+++  L +LE L++  N   L++LP  IGLL
Sbjct: 283 QFPLFSKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLN--QLKSLPKEIGLL 340

Query: 152 MSLVELDV-SYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
            +L  LD+ + N+   LP  I  L+ L+ L L  N     P ++ E
Sbjct: 341 RNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWE 386


>gi|260788694|ref|XP_002589384.1| hypothetical protein BRAFLDRAFT_77826 [Branchiostoma floridae]
 gi|229274561|gb|EEN45395.1| hypothetical protein BRAFLDRAFT_77826 [Branchiostoma floridae]
          Length = 936

 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 105/193 (54%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE +   + ++  LDV +N+L  +P +IG L KL  LD  GN+L+SLP+ I + + L  
Sbjct: 28  IPEEVFD-ITDLEFLDVSNNKLSSIPEAIGRLQKLYRLDADGNMLKSLPQAIGSLQKLTH 86

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    NKL  LP  I  +L  L  LSI  N++  +P  +  L SL VLDA  N L + P 
Sbjct: 87  LYVYRNKLANLPPGIE-KLQKLTLLSIFDNQLTKVPPGVCMLPSLEVLDASNNKLSTFPP 145

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +E L  L  L I  N   L  +P  + LL +L  LDVS NK++T P  +  L+KL++L 
Sbjct: 146 GVEKLQKLRELGIDGN--QLTEVPPGVFLLPNLEVLDVSNNKLSTFPPGVKKLQKLRELR 203

Query: 182 LEGNPLVSPPMDV 194
           +  N L   P  V
Sbjct: 204 INDNQLTEVPPGV 216



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 114/254 (44%), Gaps = 48/254 (18%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L  + VL ++ NQL  +P+ +  L  L++L V  N L + P  +E  + L EL+ N N+
Sbjct: 287 KLQKLRVLHIYGNQLTEVPSGVCSLPNLELLHVGKNKLSTFPPGVEKLQKLRELHINDNQ 346

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L ++P  +   L NL+ L+++ N I  LP  +T LT L+ LD         P  +  L  
Sbjct: 347 LTEVPSGV-CSLPNLELLNVSNNPIRRLPNDVTRLTRLKNLDVHCCQFDEFPRQVLQLKT 405

Query: 129 LEVLNISQ--------------NFQYL----------ETLPYSIGLLMSLVE-------- 156
           LE L   Q              N Q+L           TLP ++  L +L E        
Sbjct: 406 LEKLYAGQSVGRKFDMVPDEVGNLQHLWYLALENNLLRTLPSTMSRLHNLREVHLWNNKF 465

Query: 157 ---------------LDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSA 201
                          LD+S N IT LP ++    KL+ L + GNPL  PP DV EQG  A
Sbjct: 466 DTFPEVLCELPAMEKLDISNNNITRLPTALHRADKLKDLDVSGNPLTYPPQDVCEQGTGA 525

Query: 202 VKGYLSEKMNNDHK 215
           +  +L ++   D +
Sbjct: 526 IMAFLKQEAEKDER 539



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 94/186 (50%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L  + +L +  NQL  +P  +  L  L+VLD S N L + P  +E  + L EL  + N+
Sbjct: 103 KLQKLTLLSIFDNQLTKVPPGVCMLPSLEVLDASNNKLSTFPPGVEKLQKLRELGIDGNQ 162

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L ++P  + F L NL+ L ++ NK+   P  +  L  LR L    N L  +P  + +L N
Sbjct: 163 LTEVPPGV-FLLPNLEVLDVSNNKLSTFPPGVKKLQKLRELRINDNQLTEVPPGVCSLPN 221

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           LEVLN+  N   L   P  +  L  L  L ++ N++T +P  +  L  L+ L +  N L 
Sbjct: 222 LEVLNVDNN--NLSAFPPGVEKLQKLRGLGINDNQLTEVPSGVCSLPNLEALGVGNNKLS 279

Query: 189 SPPMDV 194
           + P  V
Sbjct: 280 TFPPGV 285



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 26/209 (12%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLK-----------------------VLDVSGNLL 46
           L N+ VLDV +N+L   P  +  L KL+                       VL+V  N L
Sbjct: 173 LPNLEVLDVSNNKLSTFPPGVKKLQKLRELRINDNQLTEVPPGVCSLPNLEVLNVDNNNL 232

Query: 47  ESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSL 106
            + P  +E  + L  L  N N+L ++P  +   L NL+ L +  NK+   P  +  L  L
Sbjct: 233 SAFPPGVEKLQKLRGLGINDNQLTEVPSGV-CSLPNLEALGVGNNKLSTFPPGVEKLQKL 291

Query: 107 RVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITT 166
           RVL    N L  +P  + +L NLE+L++ +N   L T P  +  L  L EL ++ N++T 
Sbjct: 292 RVLHIYGNQLTEVPSGVCSLPNLELLHVGKN--KLSTFPPGVEKLQKLRELHINDNQLTE 349

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
           +P  +  L  L+ L++  NP+   P DV 
Sbjct: 350 VPSGVCSLPNLELLNVSNNPIRRLPNDVT 378


>gi|324500178|gb|ADY40092.1| Protein lap1 [Ascaris suum]
          Length = 1428

 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 111/194 (57%), Gaps = 6/194 (3%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP S++ +L  +  LD+  N+L  LP+ IG LS L+ L V  N LE+LP++I  CRSL++
Sbjct: 167 IPPSIS-QLTQLQRLDLGHNELDDLPSEIGLLSNLQELYVDQNDLEALPESIVQCRSLQQ 225

Query: 62  LNANFNKLRQLPDTIG-FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           L+ + NKL  LPD IG  E +N  T+S NC  + +LP S+ HL  L +L    N +  L 
Sbjct: 226 LDVSENKLMVLPDDIGDLEQLNDLTVSHNC--LQVLPTSVGHLKKLAILKVDRNAITQLT 283

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             + +   L  L +++N   L  +P S+G L +L  L++  N++  +P +IG    L  L
Sbjct: 284 PAVGSCTALSELYLTENL--LTEVPTSLGNLKALRTLNLDKNQLKEIPSTIGGCISLSVL 341

Query: 181 SLEGNPLVSPPMDV 194
           SL  N L   P+++
Sbjct: 342 SLRDNLLEQLPLEI 355



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 102/180 (56%), Gaps = 3/180 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L+V  N L+ +P SI  L++L+ LD+  N L+ LP  I    +L+EL  + N
Sbjct: 149 GHLRNLRSLEVRENLLRTIPPSISQLTQLQRLDLGHNELDDLPSEIGLLSNLQELYVDQN 208

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP++I  +  +L+ L ++ NK+++LP  +  L  L  L    NCL+ LP  + +L 
Sbjct: 209 DLEALPESI-VQCRSLQQLDVSENKLMVLPDDIGDLEQLNDLTVSHNCLQVLPTSVGHLK 267

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L +L + +N   +  L  ++G   +L EL ++ N +T +P S+G L+ L+ L+L+ N L
Sbjct: 268 KLAILKVDRN--AITQLTPAVGSCTALSELYLTENLLTEVPTSLGNLKALRTLNLDKNQL 325



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 97/189 (51%), Gaps = 5/189 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           AR L    LD   N +K L   +    KLK L +S N +  +P  I N   LEELN   N
Sbjct: 36  ARTLEEAYLDC--NHIKDLEKPLFRCRKLKTLSLSENEIIRVPTDIANLICLEELNLKGN 93

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            +  LP+ I  E   LK L ++ N I  LP ++T LTS+  L      L  +P D+ +L 
Sbjct: 94  DVSDLPEEIK-ECTQLKILDLSSNPITRLPPTITLLTSMTHLGLNDISLTQMPLDIGHLR 152

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L + +N   L T+P SI  L  L  LD+ +N++  LP  IG L  LQ+L ++ N L
Sbjct: 153 NLRSLEVRENL--LRTIPPSISQLTQLQRLDLGHNELDDLPSEIGLLSNLQELYVDQNDL 210

Query: 188 VSPPMDVVE 196
            + P  +V+
Sbjct: 211 EALPESIVQ 219



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 84/148 (56%), Gaps = 3/148 (2%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L V  N L+ LP S+G L KL +L V  N +  L   + +C +L EL    N L ++P +
Sbjct: 249 LTVSHNCLQVLPTSVGHLKKLAILKVDRNAITQLTPAVGSCTALSELYLTENLLTEVPTS 308

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           +G  L  L+TL+++ N++  +P ++    SL VL  R N L+ LP ++  L NL VL++ 
Sbjct: 309 LG-NLKALRTLNLDKNQLKEIPSTIGGCISLSVLSLRDNLLEQLPLEIGRLENLRVLDVC 367

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNK 163
            N   L  LP++I +L +L  L +S ++
Sbjct: 368 NN--RLNFLPFTINVLFNLQALWLSESQ 393



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 77/137 (56%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+   L  + +L V  N +  L  ++G  + L  L ++ NLL  +P ++ N ++L 
Sbjct: 258 VLPTSV-GHLKKLAILKVDRNAITQLTPAVGSCTALSELYLTENLLTEVPTSLGNLKALR 316

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            LN + N+L+++P TIG   I+L  LS+  N +  LP  +  L +LRVLD   N L  LP
Sbjct: 317 TLNLDKNQLKEIPSTIGG-CISLSVLSLRDNLLEQLPLEIGRLENLRVLDVCNNRLNFLP 375

Query: 121 EDLENLINLEVLNISQN 137
             +  L NL+ L +S++
Sbjct: 376 FTINVLFNLQALWLSES 392



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIE-NCRSLEELNANFNKLRQLPDTIGFELI 81
             C+P    C  ++ VLD     L+S+P  I+ N R+LEE   + N ++ L   + F   
Sbjct: 3   FSCIP-FFACNRQIDVLDRRQCNLQSVPNDIDRNARTLEEAYLDCNHIKDLEKPL-FRCR 60

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
            LKTLS++ N+I+                        +P D+ NLI LE LN+  N   +
Sbjct: 61  KLKTLSLSENEII-----------------------RVPTDIANLICLEELNLKGN--DV 95

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP  I     L  LD+S N IT LP +I  L  +  L L    L   P+D+
Sbjct: 96  SDLPEEIKECTQLKILDLSSNPITRLPPTITLLTSMTHLGLNDISLTQMPLDI 148


>gi|327282314|ref|XP_003225888.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Anolis
           carolinensis]
          Length = 605

 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 129/270 (47%), Gaps = 68/270 (25%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCR--------------- 57
           + VLD+H NQL  LP +IG L  L+ L+VS N L  LP+ +   +               
Sbjct: 108 LTVLDIHDNQLTSLPLAIGSLENLQKLNVSHNKLTDLPEELLQLKHLRSLLLQHNELSHL 167

Query: 58  --------SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
                   SLEEL+ + N +  +P +  F L NL  L+++ N++  LP  ++ + SLR L
Sbjct: 168 PDEFGKLISLEELDISNNHVSAIPTSFAF-LTNLVQLNLSHNQLKFLPAEISAMKSLRQL 226

Query: 110 DARLNCLKSLPEDLENLINLEVLNISQN-FQY---------------------------- 140
           D   N L+++P +L N+ +LE L + +N  +Y                            
Sbjct: 227 DCTKNYLETIPPELANMASLEQLYLRRNKLRYLPDLPSCTVLKELHVGENQIEMLKAEHL 286

Query: 141 ---------------LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
                          L+++P  I LL  +  LD+S N I++LP  +G L +L+ L+LEGN
Sbjct: 287 KHLNSLCVLDLRENKLKSVPDEIALLEGIERLDLSNNDISSLPCKLGNLSQLKFLALEGN 346

Query: 186 PLVSPPMDVVEQGLSAVKGYLSEKMNNDHK 215
           PL +   D++++G   +  YL  K+ +D++
Sbjct: 347 PLRTIRRDILQKGTQEILKYLRNKIQDDNE 376



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 93/168 (55%), Gaps = 3/168 (1%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN+LKCL + +  L  L VLD+  N L SLP  I +  +L++LN + NKL  LP+ +  +
Sbjct: 92  SNKLKCLSDDLKLLPALTVLDIHDNQLTSLPLAIGSLENLQKLNVSHNKLTDLPEEL-LQ 150

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L++L +  N++  LP     L SL  LD   N + ++P     L NL  LN+S N  
Sbjct: 151 LKHLRSLLLQHNELSHLPDEFGKLISLEELDISNNHVSAIPTSFAFLTNLVQLNLSHN-- 208

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ LP  I  + SL +LD + N + T+P  +  +  L++L L  N L
Sbjct: 209 QLKFLPAEISAMKSLRQLDCTKNYLETIPPELANMASLEQLYLRRNKL 256



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 25/207 (12%)

Query: 29  SIGCLSKLKVLDVSGNLLESLPKTIENC---RSLEELNANFNKLRQLPDTIGFELINLKT 85
           ++  L+ LK LD S      +P  + N      +  +N + N L ++P  I      +  
Sbjct: 397 NLHALTALKTLDYSEKQATVIPDEVLNAVGNNPVTTVNFSKNHLTEIPARIVELKETVCD 456

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN-------- 137
           ++ + NK+  +   L  L  L  LD R NCL SLP+++E L  L+++N++ N        
Sbjct: 457 INFSFNKLFSVSLELCMLYRLTHLDVRNNCLTSLPDEMEALGKLQIINLAFNRFKVFPDI 516

Query: 138 ---FQYLETL-----------PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLE 183
                 LE +           P  I  L  L  LD+  N I  +P  +G    L+ L LE
Sbjct: 517 LYRIPTLEAILLGNNQVGSLDPLQIKKLDQLSTLDLQNNDILHVPPELGNCTSLRTLLLE 576

Query: 184 GNPLVSPPMDVVEQGLSAVKGYLSEKM 210
           GNP  +P + ++ +G  AV  YL  ++
Sbjct: 577 GNPFRTPRVTILAKGTDAVLEYLRSRI 603



 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 71/154 (46%), Gaps = 25/154 (16%)

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
           +E  +L  L ++ NK+  L   L  L +L VLD   N L SLP  + +L NL+ LN+S N
Sbjct: 80  WEQTDLTKLILSSNKLKCLSDDLKLLPALTVLDIHDNQLTSLPLAIGSLENLQKLNVSHN 139

Query: 138 -------------------FQY--LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
                               Q+  L  LP   G L+SL ELD+S N ++ +P S   L  
Sbjct: 140 KLTDLPEELLQLKHLRSLLLQHNELSHLPDEFGKLISLEELDISNNHVSAIPTSFAFLTN 199

Query: 177 LQKLSLEGNPLVSPPMDVVE----QGLSAVKGYL 206
           L +L+L  N L   P ++      + L   K YL
Sbjct: 200 LVQLNLSHNQLKFLPAEISAMKSLRQLDCTKNYL 233



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 49/94 (52%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LDV +N L  LP+ +  L KL++++++ N  +  P  +    +LE +    N++  L   
Sbjct: 480 LDVRNNCLTSLPDEMEALGKLQIINLAFNRFKVFPDILYRIPTLEAILLGNNQVGSLDPL 539

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
              +L  L TL +  N I+ +P  L + TSLR L
Sbjct: 540 QIKKLDQLSTLDLQNNDILHVPPELGNCTSLRTL 573


>gi|440754490|ref|ZP_20933692.1| small GTP-binding domain protein [Microcystis aeruginosa TAIHU98]
 gi|440174696|gb|ELP54065.1| small GTP-binding domain protein [Microcystis aeruginosa TAIHU98]
          Length = 852

 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 119/200 (59%), Gaps = 13/200 (6%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +NQ++ +P ++  L+ L+VL +S N +  +P+ +    SL+ L+ ++N++ ++P+ +   
Sbjct: 48  NNQIREIPEALAHLTPLQVLLLSDNQIREIPEALAQLTSLQYLDLSYNQISEIPEALA-H 106

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L  L ++ N+I  +P++LTHLTSL+ L    N ++ +PE L +L +L+ L +S N  
Sbjct: 107 LTSLLGLGLSYNQIREIPEALTHLTSLQFLYLSNNQIREIPEALAHLTSLQFLYLSNN-- 164

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGL 199
            +  +P ++  L SL  L +SYN+I  +P+++  L  L++L LE NP+ + P +++ QG 
Sbjct: 165 QIREIPEALAQLTSLQYLFLSYNQIREIPEALAHLVNLKRLVLENNPITNVPPEIIRQGW 224

Query: 200 ----------SAVKGYLSEK 209
                      A+  YL +K
Sbjct: 225 GKTIWDDGNPQAIFSYLKDK 244



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 77/132 (58%), Gaps = 3/132 (2%)

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
           E+L+ +   L ++P  I   L +L+ L ++ N+I  +P++L HLT L+VL    N ++ +
Sbjct: 19  EKLDLSNKNLTEIPPEIP-HLTSLQHLYLSNNQIREIPEALAHLTPLQVLLLSDNQIREI 77

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE L  L +L+ L++S N   +  +P ++  L SL+ L +SYN+I  +P+++  L  LQ 
Sbjct: 78  PEALAQLTSLQYLDLSYN--QISEIPEALAHLTSLLGLGLSYNQIREIPEALTHLTSLQF 135

Query: 180 LSLEGNPLVSPP 191
           L L  N +   P
Sbjct: 136 LYLSNNQIREIP 147


>gi|308451071|ref|XP_003088533.1| hypothetical protein CRE_29288 [Caenorhabditis remanei]
 gi|308478403|ref|XP_003101413.1| hypothetical protein CRE_13532 [Caenorhabditis remanei]
 gi|308246970|gb|EFO90922.1| hypothetical protein CRE_29288 [Caenorhabditis remanei]
 gi|308263314|gb|EFP07267.1| hypothetical protein CRE_13532 [Caenorhabditis remanei]
          Length = 559

 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 108/186 (58%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
            L  +  L ++ N+L CLP  IG L  LK L +S N L SLP ++ +  SLE L+   NK
Sbjct: 94  ELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALSSLPDSLASLESLETLDLRHNK 153

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L ++P  I +++ +L+TL +  N+IV + + + +L  L++LD R N ++ LP  +  L +
Sbjct: 154 LTEVPSVI-YKINSLETLWLRYNRIVAVDEQIGNLVKLKMLDVRENKIRELPSAIGKLTS 212

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L V  +S N  +L  +P  IG  +SL +LD+ +N ++ LP SIG L  L ++ +  N + 
Sbjct: 213 LVVCLVSYN--HLTRVPEEIGECLSLTQLDLQHNDLSELPYSIGKLTNLVRIGIRYNKIR 270

Query: 189 SPPMDV 194
             P ++
Sbjct: 271 CIPSEL 276



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 98/180 (54%), Gaps = 3/180 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L+N+  L +  N L  LP+S+  L  L+ LD+  N L  +P  I    SLE L   +N
Sbjct: 116 GQLVNLKKLGLSENALSSLPDSLASLESLETLDLRHNKLTEVPSVIYKINSLETLWLRYN 175

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           ++  + + IG  L+ LK L +  NKI  LP ++  LTSL V     N L  +PE++   +
Sbjct: 176 RIVAVDEQIG-NLVKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGECL 234

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  L++  N   L  LPYSIG L +LV + + YNKI  +P  +   ++L++  +E N L
Sbjct: 235 SLTQLDLQHN--DLSELPYSIGKLTNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHL 292



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 111/262 (42%), Gaps = 70/262 (26%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +    L++  LD+  N L  LP SIG L+ L  + +  N +  +P  +E+C+ LEE
Sbjct: 226 VPEEI-GECLSLTQLDLQHNDLSELPYSIGKLTNLVRIGIRYNKIRCIPSELESCQQLEE 284

Query: 62  ------------------------------------------------LNANFNKLRQLP 73
                                                           +N   N++ ++P
Sbjct: 285 FIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIP 344

Query: 74  DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLN 133
             I  +   L  L++  N++V LP  +   TS+  L+   N LK LPED+E L+NLE+L 
Sbjct: 345 IGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILV 404

Query: 134 ISQN---------------------FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
           +S N                        LET+P  IG L  L +L +  NKI TLP SIG
Sbjct: 405 LSNNQLKKLPNQIGNLKKLRELDLEENELETVPTEIGFLQHLTKLWIQSNKIITLPRSIG 464

Query: 173 CLRKLQKLSLEGNPLVSPPMDV 194
            L  LQ L L  N L + P ++
Sbjct: 465 NLCSLQDLRLGENNLTAIPEEI 486



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/179 (35%), Positives = 88/179 (49%), Gaps = 26/179 (14%)

Query: 39  LDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ 98
           LD+S   + S+P  I+    L EL    NKL  LP  IG +L+NLK L ++ N +  LP 
Sbjct: 78  LDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIG-QLVNLKKLGLSENALSSLPD 136

Query: 99  SLTHLTSLRVLDARLNCLKSLP-----------------------EDLENLINLEVLNIS 135
           SL  L SL  LD R N L  +P                       E + NL+ L++L++ 
Sbjct: 137 SLASLESLETLDLRHNKLTEVPSVIYKINSLETLWLRYNRIVAVDEQIGNLVKLKMLDVR 196

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +N   +  LP +IG L SLV   VSYN +T +P+ IG    L +L L+ N L   P  +
Sbjct: 197 EN--KIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGECLSLTQLDLQHNDLSELPYSI 253



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 101/202 (50%), Gaps = 33/202 (16%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N++  +   IG L KLK+LDV  N +  LP  I    SL     ++N L ++P+ IG E 
Sbjct: 175 NRIVAVDEQIGNLVKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIG-EC 233

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
           ++L  L +  N +  LP S+  LT+L  +  R N ++ +P +LE+   LE   +  N  +
Sbjct: 234 LSLTQLDLQHNDLSELPYSIGKLTNLVRIGIRYNKIRCIPSELESCQQLEEFIVESN--H 291

Query: 141 LETLP----------YSIGL---------------LMSLVELDVSYNKITTLPDSIGCLR 175
           L+ LP          +++ L                +S V +++ +N+I+ +P  IG   
Sbjct: 292 LQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIP--IGIFS 349

Query: 176 K---LQKLSLEGNPLVSPPMDV 194
           K   L KL+L+ N LVS P+D+
Sbjct: 350 KATRLTKLNLKENELVSLPLDM 371



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 99/187 (52%), Gaps = 29/187 (15%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++PE +  +L+N+ +L + +NQLK LPN IG L KL+ LD+  N LE+            
Sbjct: 389 VLPEDI-EKLVNLEILVLSNNQLKKLPNQIGNLKKLRELDLEENELET------------ 435

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
                      +P  IGF L +L  L I  NKI+ LP+S+ +L SL+ L    N L ++P
Sbjct: 436 -----------VPTEIGF-LQHLTKLWIQSNKIITLPRSIGNLCSLQDLRLGENNLTAIP 483

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI---GCLRKL 177
           E++ +L +L+ L ++ N   L  LP+ + L  SL  + +  + ++ +P  I   G    +
Sbjct: 484 EEIGHLDSLKSLYLNDN-SSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVI 542

Query: 178 QKLSLEG 184
           Q L ++G
Sbjct: 543 QYLKMQG 549


>gi|28972079|dbj|BAC65493.1| mKIAA0147 protein [Mus musculus]
          Length = 1694

 Score = 97.4 bits (241), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 109/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 114 RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 173

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 174 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 231

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 232 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 289

Query: 188 VSPPMD 193
              P++
Sbjct: 290 EELPVE 295



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 65/193 (33%), Positives = 106/193 (54%), Gaps = 7/193 (3%)

Query: 1   MIPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRS 58
           ++PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   
Sbjct: 83  VVPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQ 140

Query: 59  LEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKS 118
           L EL+ + N + ++P++I F    L+    + N +  LP   T L SL  L      L++
Sbjct: 141 LVELDVSRNDIPEIPESIKF-CKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 199

Query: 119 LPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQ 178
           LP D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L+
Sbjct: 200 LPGDVGNLANLVTLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLR 257

Query: 179 KLSLEGNPLVSPP 191
           +L L+ N L + P
Sbjct: 258 ELWLDRNQLSALP 270



 Score = 86.7 bits (213), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 71/183 (38%), Positives = 100/183 (54%), Gaps = 4/183 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 207 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 266

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LPE +  L  L
Sbjct: 267 SALPPELG-NLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL 325

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL-V 188
            +L + QN   L  +  +IG   +L EL ++ N +T LP S+G L KL  L+++ N L V
Sbjct: 326 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEV 383

Query: 189 SPP 191
            PP
Sbjct: 384 LPP 386



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 136 ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 195

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 196 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 254

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 255 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 293



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 177 LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 235

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 236 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPV 294

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L  L  L +SQN   L+ LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 295 ELGGLALLTDLLLSQNL--LQRLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 352

Query: 182 LEGNPLVSPP 191
           L  N L + P
Sbjct: 353 LTENLLTALP 362



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 245 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLT 303

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N L++LP+ IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 304 DLLLSQNLLQRLPEGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALP 362

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 363 HSLGKLTKLTNLNVDRN--HLEVLPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVL 420

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 421 DVAGNRLRSLPFALTHLNLKAL 442



 Score = 67.0 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 48/136 (35%), Positives = 73/136 (53%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP ++     L  
Sbjct: 315 LPEGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTN 373

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++ +LP  L H   L VLD   N L+SLP 
Sbjct: 374 LNVDRNHLEVLPPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPF 432

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 433 ALTHL-NLKALWLAEN 447



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 58/193 (30%), Positives = 89/193 (46%), Gaps = 39/193 (20%)

Query: 3   PESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEE 61
           P SL AR++           LKC+P    C   ++ +D     L+ +P+ I    RSLEE
Sbjct: 50  PRSLPARIM-----------LKCIP-LWRCNRHVESVDKRHCSLQVVPEEIYRYSRSLEE 97

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+LR+LP    F L+NL+ L ++ N+I                       + LP 
Sbjct: 98  LLLDANQLRELPKPF-FRLLNLRKLGLSDNEI-----------------------QRLPP 133

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++ N + L  L++S+N   +  +P SI    +L   D S N ++ LPD    LR L  L+
Sbjct: 134 EVANFMQLVELDVSRN--DIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLA 191

Query: 182 LEGNPLVSPPMDV 194
           L    L + P DV
Sbjct: 192 LNDVSLQALPGDV 204


>gi|300798331|ref|NP_001178808.1| protein scribble homolog [Rattus norvegicus]
 gi|149066145|gb|EDM16018.1| similar to PDZ-domain protein scribble (predicted), isoform CRA_b
           [Rattus norvegicus]
          Length = 1663

 Score = 97.4 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 109/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 116

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 117 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 174

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 175 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 188 VSPPMD 193
              P++
Sbjct: 233 EELPVE 238



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 65/193 (33%), Positives = 106/193 (54%), Gaps = 7/193 (3%)

Query: 1   MIPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRS 58
           ++PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   
Sbjct: 26  VVPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQ 83

Query: 59  LEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKS 118
           L EL+ + N + ++P++I F    L+    + N +  LP   T L SL  L      L++
Sbjct: 84  LVELDVSRNDIPEIPESIKF-CKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 119 LPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQ 178
           LP D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L+
Sbjct: 143 LPGDVGNLANLVTLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLR 200

Query: 179 KLSLEGNPLVSPP 191
           +L L+ N L + P
Sbjct: 201 ELWLDRNQLSALP 213



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 71/183 (38%), Positives = 100/183 (54%), Gaps = 4/183 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 150 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 209

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LPE +  L  L
Sbjct: 210 SALPPELG-NLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL 268

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL-V 188
            +L + QN   L  +  +IG   +L EL ++ N +T LP S+G L KL  L+++ N L V
Sbjct: 269 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVDRNHLEV 326

Query: 189 SPP 191
            PP
Sbjct: 327 LPP 329



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 139 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 198 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 236



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 120 LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 179 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPV 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L  L  L +SQN   L+ LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 238 ELGGLALLTDLLLSQNL--LQRLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 295

Query: 182 LEGNPLVSPP 191
           L  N L + P
Sbjct: 296 LTENLLTALP 305



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 188 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLT 246

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N L++LP+ IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 247 DLLLSQNLLQRLPEGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALP 305

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 306 RSLGKLTKLTNLNVDRN--HLEVLPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVL 363

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 364 DVAGNRLRSLPFALTHLNLKAL 385



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 48/136 (35%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP+++     L  
Sbjct: 258 LPEGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTN 316

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++ +LP  L H   L VLD   N L+SLP 
Sbjct: 317 LNVDRNHLEVLPPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPF 375

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 376 ALTHL-NLKALWLAEN 390



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           LKC+P    C   ++ +D     L+ +P+ I    RSLEEL  + N+LR+LP    F L+
Sbjct: 2   LKCIP-LWRCNRHVESVDKRHCSLQVVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLL 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I                       + LP ++ N + L  L++S+N   +
Sbjct: 60  NLRKLGLSDNEI-----------------------QRLPPEVANFMQLVELDVSRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P SI    +L   D S N ++ LPD    LR L  L+L    L + P DV
Sbjct: 95  PEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDV 147


>gi|149066146|gb|EDM16019.1| similar to PDZ-domain protein scribble (predicted), isoform CRA_c
           [Rattus norvegicus]
          Length = 1638

 Score = 97.4 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 109/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 116

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 117 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 174

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 175 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 188 VSPPMD 193
              P++
Sbjct: 233 EELPVE 238



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 65/193 (33%), Positives = 106/193 (54%), Gaps = 7/193 (3%)

Query: 1   MIPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRS 58
           ++PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   
Sbjct: 26  VVPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQ 83

Query: 59  LEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKS 118
           L EL+ + N + ++P++I F    L+    + N +  LP   T L SL  L      L++
Sbjct: 84  LVELDVSRNDIPEIPESIKF-CKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 119 LPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQ 178
           LP D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L+
Sbjct: 143 LPGDVGNLANLVTLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLR 200

Query: 179 KLSLEGNPLVSPP 191
           +L L+ N L + P
Sbjct: 201 ELWLDRNQLSALP 213



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 71/183 (38%), Positives = 100/183 (54%), Gaps = 4/183 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 150 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 209

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LPE +  L  L
Sbjct: 210 SALPPELG-NLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL 268

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL-V 188
            +L + QN   L  +  +IG   +L EL ++ N +T LP S+G L KL  L+++ N L V
Sbjct: 269 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVDRNHLEV 326

Query: 189 SPP 191
            PP
Sbjct: 327 LPP 329



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 139 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 198 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 236



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 120 LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 179 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPV 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L  L  L +SQN   L+ LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 238 ELGGLALLTDLLLSQNL--LQRLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 295

Query: 182 LEGNPLVSPP 191
           L  N L + P
Sbjct: 296 LTENLLTALP 305



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 188 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLT 246

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N L++LP+ IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 247 DLLLSQNLLQRLPEGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALP 305

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 306 RSLGKLTKLTNLNVDRN--HLEVLPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVL 363

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 364 DVAGNRLRSLPFALTHLNLKAL 385



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 48/136 (35%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP+++     L  
Sbjct: 258 LPEGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTN 316

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++ +LP  L H   L VLD   N L+SLP 
Sbjct: 317 LNVDRNHLEVLPPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPF 375

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 376 ALTHL-NLKALWLAEN 390



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           LKC+P    C   ++ +D     L+ +P+ I    RSLEEL  + N+LR+LP    F L+
Sbjct: 2   LKCIP-LWRCNRHVESVDKRHCSLQVVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLL 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I                       + LP ++ N + L  L++S+N   +
Sbjct: 60  NLRKLGLSDNEI-----------------------QRLPPEVANFMQLVELDVSRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P SI    +L   D S N ++ LPD    LR L  L+L    L + P DV
Sbjct: 95  PEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDV 147


>gi|148697569|gb|EDL29516.1| scribbled homolog (Drosophila), isoform CRA_c [Mus musculus]
          Length = 1669

 Score = 97.4 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 109/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 114 RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 173

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 174 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 231

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 232 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 289

Query: 188 VSPPMD 193
              P++
Sbjct: 290 EELPVE 295



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 65/193 (33%), Positives = 106/193 (54%), Gaps = 7/193 (3%)

Query: 1   MIPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRS 58
           ++PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   
Sbjct: 83  VVPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQ 140

Query: 59  LEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKS 118
           L EL+ + N + ++P++I F    L+    + N +  LP   T L SL  L      L++
Sbjct: 141 LVELDVSRNDIPEIPESIKF-CKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 199

Query: 119 LPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQ 178
           LP D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L+
Sbjct: 200 LPGDVGNLANLVTLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLR 257

Query: 179 KLSLEGNPLVSPP 191
           +L L+ N L + P
Sbjct: 258 ELWLDRNQLSALP 270



 Score = 86.7 bits (213), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 71/183 (38%), Positives = 100/183 (54%), Gaps = 4/183 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 207 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 266

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LPE +  L  L
Sbjct: 267 SALPPELG-NLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL 325

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL-V 188
            +L + QN   L  +  +IG   +L EL ++ N +T LP S+G L KL  L+++ N L V
Sbjct: 326 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEV 383

Query: 189 SPP 191
            PP
Sbjct: 384 LPP 386



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 136 ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 195

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 196 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 254

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 255 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 293



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 177 LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 235

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 236 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPV 294

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L  L  L +SQN   L+ LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 295 ELGGLALLTDLLLSQNL--LQRLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 352

Query: 182 LEGNPLVSPP 191
           L  N L + P
Sbjct: 353 LTENLLTALP 362



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 245 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLT 303

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N L++LP+ IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 304 DLLLSQNLLQRLPEGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALP 362

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 363 HSLGKLTKLTNLNVDRN--HLEVLPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVL 420

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 421 DVAGNRLRSLPFALTHLNLKAL 442



 Score = 67.0 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 48/136 (35%), Positives = 73/136 (53%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP ++     L  
Sbjct: 315 LPEGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTN 373

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++ +LP  L H   L VLD   N L+SLP 
Sbjct: 374 LNVDRNHLEVLPPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPF 432

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 433 ALTHL-NLKALWLAEN 447



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 58/193 (30%), Positives = 89/193 (46%), Gaps = 39/193 (20%)

Query: 3   PESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEE 61
           P SL AR++           LKC+P    C   ++ +D     L+ +P+ I    RSLEE
Sbjct: 50  PRSLPARIM-----------LKCIP-LWRCNRHVESVDKRHCSLQVVPEEIYRYSRSLEE 97

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+LR+LP    F L+NL+ L ++ N+I                       + LP 
Sbjct: 98  LLLDANQLRELPKPF-FRLLNLRKLGLSDNEI-----------------------QRLPP 133

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++ N + L  L++S+N   +  +P SI    +L   D S N ++ LPD    LR L  L+
Sbjct: 134 EVANFMQLVELDVSRN--DIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLA 191

Query: 182 LEGNPLVSPPMDV 194
           L    L + P DV
Sbjct: 192 LNDVSLQALPGDV 204


>gi|334326414|ref|XP_003340753.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog
           [Monodelphis domestica]
          Length = 1651

 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 111/187 (59%), Gaps = 5/187 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 116

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   + +LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 117 LSRLPD--GFTQLRSLAHLALNDVSLQVLPGDVGNLANLVTLELRENLLKSLPTSLSFLV 174

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++TLP  +G LR+L  L +  N L
Sbjct: 175 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSTLPPELGNLRRLVCLDVSENKL 232

Query: 188 VSPPMDV 194
              P +V
Sbjct: 233 EQLPAEV 239



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 84/164 (51%), Gaps = 3/164 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 139 SLQVLPGDVG-NLANLVTLELRENLLKSLPTSLSFLVKLEQLDLGGNDLEVLPDTLGALP 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           NL  L + +N   L TLP  +G L  LV LDVS NK+  LP  +
Sbjct: 198 NLRELWLDRN--QLSTLPPELGNLRRLVCLDVSENKLEQLPAEV 239



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 100/207 (48%), Gaps = 22/207 (10%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 150 LANLVTLELRENLLKSLPTSLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 209

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ NK+  LP  ++ LT L  L    N L+ LP+ +  L  L
Sbjct: 210 STLPPELG-NLRRLVCLDVSENKLEQLPAEVSGLTLLTDLLLSQNLLERLPDGIGQLKQL 268

Query: 130 EVLNISQNF---------------------QYLETLPYSIGLLMSLVELDVSYNKITTLP 168
            +L + QN                        L  LP S+G L  L  L+V  N++ TLP
Sbjct: 269 SILKVDQNRLCEVTETIGECENLSELILTENMLTALPRSLGKLTKLTNLNVDRNRLGTLP 328

Query: 169 DSIGCLRKLQKLSLEGNPLVSPPMDVV 195
             +G    L  LSL  N L S P ++ 
Sbjct: 329 AEVGGCTSLNVLSLRDNRLASLPPELA 355



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 120 LPDGFT-QLRSLAHLALNDVSLQVLPGDVGNLANLVTLELRENLLKSLPTSLSFLVKLEQ 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 179 LDLGGNDLEVLPDTLGA-LPNLRELWLDRNQLSTLPPELGNLRRLVCLDVSENKLEQLPA 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L  L  L +SQN   LE LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 238 EVSGLTLLTDLLLSQNL--LERLPDGIGQLKQLSILKVDQNRLCEVTETIGECENLSELI 295

Query: 182 LEGNPLVSPP 191
           L  N L + P
Sbjct: 296 LTENMLTALP 305



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 107/208 (51%), Gaps = 6/208 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 188 VLPDTLGA-LPNLRELWLDRNQLSTLPPELGNLRRLVCLDVSENKLEQLPAEVSGLTLLT 246

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N L +LPD IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 247 DLLLSQNLLERLPDGIG-QLKQLSILKVDQNRLCEVTETIGECENLSELILTENMLTALP 305

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N   L TLP  +G   SL  L +  N++ +LP  +    +L  L
Sbjct: 306 RSLGKLTKLTNLNVDRN--RLGTLPAEVGGCTSLNVLSLRDNRLASLPPELAGTTELHVL 363

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSE 208
            + GN L S P  +    L A+  +L+E
Sbjct: 364 DVAGNRLQSLPFALTHLNLKAL--WLAE 389



 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           LKC+P    C   ++ +D     L+++P+ I    RSLEEL  + N+LR+LP    F L+
Sbjct: 2   LKCIP-LWRCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLL 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I                       + LP ++ N + L  L++S+N   +
Sbjct: 60  NLRKLGLSDNEI-----------------------QRLPPEVANFMQLVELDVSRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P SI    +L   D S N ++ LPD    LR L  L+L    L   P DV
Sbjct: 95  PEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQVLPGDV 147


>gi|93005765|ref|YP_580202.1| hypothetical protein Pcryo_0937 [Psychrobacter cryohalolentis K5]
 gi|92393443|gb|ABE74718.1| Leucine-rich repeat, typical subtype [Psychrobacter cryohalolentis
           K5]
          Length = 757

 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 83/217 (38%), Positives = 117/217 (53%), Gaps = 31/217 (14%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGN-LLESLPKTIENCRSLE 60
           IPES+   L ++V   +  +++K LPNSIG LSKLK L +S N  L  LPK++ N  +LE
Sbjct: 54  IPESI-GNLKSLVTFALEGSKVKKLPNSIGELSKLKQLVISSNDKLTELPKSMGNLENLE 112

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCN------------------------KIVIL 96
           EL    N L++LPD+ G +L NL  L+IN N                         I  L
Sbjct: 113 ELQLRGNGLKKLPDSFG-QLSNLIYLTINGNYNLTELPESLGGLENLESLTLGYMGITKL 171

Query: 97  PQSLTHLTSLRVLDAR-LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
           P+S+  L+ L+ L    L  +  LPE +++L NLE L +  +    + LP SIG L++L 
Sbjct: 172 PESIGQLSKLKYLTIEDLENIIDLPESIKDLGNLESLTLENSG--FKKLPESIGQLLNLT 229

Query: 156 ELDVSY-NKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            L ++Y N IT  P+SIG L  L+ LSL GN +   P
Sbjct: 230 NLTINYNNNITEFPESIGNLNILEYLSLGGNSVKKLP 266



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 64/153 (41%), Positives = 95/153 (62%), Gaps = 4/153 (2%)

Query: 33  LSKLKVLDVSGN-LLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCN 91
           L KL+VL++S N  + ++P++I N +SL       +K+++LP++IG EL  LK L I+ N
Sbjct: 37  LIKLEVLEISYNDEISTIPESIGNLKSLVTFALEGSKVKKLPNSIG-ELSKLKQLVISSN 95

Query: 92  -KIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGL 150
            K+  LP+S+ +L +L  L  R N LK LP+    L NL  L I+ N+   E LP S+G 
Sbjct: 96  DKLTELPKSMGNLENLEELQLRGNGLKKLPDSFGQLSNLIYLTINGNYNLTE-LPESLGG 154

Query: 151 LMSLVELDVSYNKITTLPDSIGCLRKLQKLSLE 183
           L +L  L + Y  IT LP+SIG L KL+ L++E
Sbjct: 155 LENLESLTLGYMGITKLPESIGQLSKLKYLTIE 187



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 108/187 (57%), Gaps = 8/187 (4%)

Query: 2   IPESLTARLLNVVVLDV-HSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +PES+  +LLN+  L + ++N +   P SIG L+ L+ L + GN ++ LP +I    SL 
Sbjct: 218 LPESI-GQLLNLTNLTINYNNNITEFPESIGNLNILEYLSLGGNSVKKLPDSIGKLFSLR 276

Query: 61  ELN-ANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNC-LKS 118
           ELN +N  K   +P++IG  L NL++LS+    I  LP+++  L+SL  L    N  L  
Sbjct: 277 ELNISNIEKSIDIPESIG-NLKNLESLSLGYINIKKLPENIFQLSSLLSLTIVDNMKLTE 335

Query: 119 LPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSY-NKITTLPDSIGCLRKL 177
           + E++  L NLE L +  N    + LP SIG L  L++L + Y  KIT +PDS+  L  L
Sbjct: 336 ISENINKLKNLETLYLKGN--NFKKLPSSIGQLSKLIDLSIEYTGKITEIPDSLVELNNL 393

Query: 178 QKLSLEG 184
           Q L+L G
Sbjct: 394 QNLTLCG 400



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 114/219 (52%), Gaps = 29/219 (13%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSG--NLLESLPKTIENCRSL 59
           +PESL   L N+  L +    +  LP SIG LSKLK L +    N+++ LP++I++  +L
Sbjct: 148 LPESLGG-LENLESLTLGYMGITKLPESIGQLSKLKYLTIEDLENIID-LPESIKDLGNL 205

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNK-IVILPQSLTHLTSLRVLDARLNCLKS 118
           E L    +  ++LP++IG +L+NL  L+IN N  I   P+S+ +L  L  L    N +K 
Sbjct: 206 ESLTLENSGFKKLPESIG-QLLNLTNLTINYNNNITEFPESIGNLNILEYLSLGGNSVKK 264

Query: 119 LPEDLENLINLEVLNISQ------------NFQYLETL----------PYSIGLLMSLVE 156
           LP+ +  L +L  LNIS             N + LE+L          P +I  L SL+ 
Sbjct: 265 LPDSIGKLFSLRELNISNIEKSIDIPESIGNLKNLESLSLGYINIKKLPENIFQLSSLLS 324

Query: 157 LDVSYN-KITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L +  N K+T + ++I  L+ L+ L L+GN     P  +
Sbjct: 325 LTIVDNMKLTEISENINKLKNLETLYLKGNNFKKLPSSI 363



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 112/206 (54%), Gaps = 17/206 (8%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDV--SGNLLESLPKTIENCRSLEELNANF 66
           +L N+  L +  N  K LP+SIG LSKL  L +  +G + E +P ++    +L+ L    
Sbjct: 342 KLKNLETLYLKGNNFKKLPSSIGQLSKLIDLSIEYTGKITE-IPDSLVELNNLQNLTLCG 400

Query: 67  NKLRQLPDTIGFELINLKTLSINCN-KIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
            ++++LP+ +   L  L  L+I  N K+   P+S+  + +L +L    N LK+L E +  
Sbjct: 401 MEIKKLPENMSH-LSCLTNLTITHNRKLTEFPESVAGIKNLEILSLNENSLKTLSESINK 459

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           + NL+ L ++ N   L++LP  +  L+ L  L++  NK+ +LP+SI  +  L+ +S+ GN
Sbjct: 460 MENLKYLYLASN--SLKSLP-DLSNLIKLEYLELDNNKLNSLPESIIGMENLESMSVYGN 516

Query: 186 PL--VSPP-------MDVVEQGLSAV 202
           PL  +S P       +DV   G+  V
Sbjct: 517 PLKAISKPVLSFLKNLDVYVDGVDEV 542



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/107 (38%), Positives = 59/107 (55%), Gaps = 2/107 (1%)

Query: 80  LINLKTLSINCN-KIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNF 138
           LI L+ L I+ N +I  +P+S+ +L SL       + +K LP  +  L  L+ L IS N 
Sbjct: 37  LIKLEVLEISYNDEISTIPESIGNLKSLVTFALEGSKVKKLPNSIGELSKLKQLVISSND 96

Query: 139 QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           +  E LP S+G L +L EL +  N +  LPDS G L  L  L++ GN
Sbjct: 97  KLTE-LPKSMGNLENLEELQLRGNGLKKLPDSFGQLSNLIYLTINGN 142



 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 1/67 (1%)

Query: 119 LPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQ 178
           +P   + LI LEVL IS N + + T+P SIG L SLV   +  +K+  LP+SIG L KL+
Sbjct: 30  IPRKPKKLIKLEVLEISYNDE-ISTIPESIGNLKSLVTFALEGSKVKKLPNSIGELSKLK 88

Query: 179 KLSLEGN 185
           +L +  N
Sbjct: 89  QLVISSN 95


>gi|294828111|ref|NP_712624.2| hypothetical protein LA_2443 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074462|ref|YP_005988779.1| hypothetical protein LIF_A2004 [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|293385958|gb|AAN49642.2| hypothetical protein LA_2443 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458251|gb|AER02796.1| hypothetical protein LIF_A2004 [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|456825302|gb|EMF73698.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 488

 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 75/189 (39%), Positives = 108/189 (57%), Gaps = 10/189 (5%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTI---ENCRSLEELNAN 65
           RL N+  L ++   L  LP  I  L  L+ L +  N L+SLPK I    N RSL+ + AN
Sbjct: 293 RLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLD-IGAN 351

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
            N+   LP  I   L NL++L +N N+  I P+ +  L  L +L+   N L +LPE +  
Sbjct: 352 -NEFEVLPKEIA-RLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 409

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L  L++L++S N   L TLP  IG L +L EL + YN+I TLP+ I  L+ L+KL+L  N
Sbjct: 410 LKGLQMLDLSHN--RLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYEN 467

Query: 186 PLVSPPMDV 194
           P+  PP ++
Sbjct: 468 PI--PPQEL 474



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 96/180 (53%), Gaps = 3/180 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV +LD+   +    P  I  L  L++L +  N + +LP+ I   ++L+EL  N NKL  
Sbjct: 38  NVRILDLSRQKFAVFPKEIWELEYLEILKLEENRITTLPREINKLKNLKELYLNGNKLTI 97

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           +P  I +EL NL  L +  N+I  LP+ +    +L+ L+ R N L +LP ++       +
Sbjct: 98  VPKEI-WELENLTILRLENNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIG--ELKLL 154

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
             ++     ++ LP  IG L +L   ++S NK+ ++P  IG L+ L+ L LE N L + P
Sbjct: 155 EELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLP 214



 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 88/161 (54%), Gaps = 3/161 (1%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           S +++LD+S       PK I     LE L    N++  LP  I  +L NLK L +N NK+
Sbjct: 37  SNVRILDLSRQKFAVFPKEIWELEYLEILKLEENRITTLPREIN-KLKNLKELYLNGNKL 95

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
            I+P+ +  L +L +L    N + +LP+++E   NL+ LN+  N   L TLP  IG L  
Sbjct: 96  TIVPKEIWELENLTILRLENNRISTLPKEIEKSKNLQELNLRGN--RLVTLPGEIGELKL 153

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L EL++  N+I  LP+ IG L  L   +L GN L S P ++
Sbjct: 154 LEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEI 194



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 22/148 (14%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L ++ N+L  +P  I  L  L +L +  N + +LPK IE  ++L+ELN   N+
Sbjct: 81  KLKNLKELYLNGNKLTIVPKEIWELENLTILRLENNRISTLPKEIEKSKNLQELNLRGNR 140

Query: 69  LRQLPDTIGF----------------------ELINLKTLSINCNKIVILPQSLTHLTSL 106
           L  LP  IG                        L NL   +++ NK+  +P+ + +L +L
Sbjct: 141 LVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNL 200

Query: 107 RVLDARLNCLKSLPEDLENLINLEVLNI 134
           R+L    N LK+LP  +E L +LEVLN+
Sbjct: 201 RMLYLENNQLKTLPRQMEKLQDLEVLNL 228



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 1/102 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ARL N+  L ++ N+ K  P  I  L KL +L+V+ N L++LP+ I   + L+ L+ + N
Sbjct: 362 ARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHN 421

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           +L  LP  IG +L NL  L +  N+I  LP+ +  L +LR L
Sbjct: 422 RLTTLPSEIG-QLHNLTELYLQYNRIKTLPEEIARLQNLRKL 462



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 111/242 (45%), Gaps = 50/242 (20%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLES---------LPKT 52
           IP+ +   L N+ +L + +NQLK LP  +  L  L+VL++  N L S         LP  
Sbjct: 190 IPKEI-GNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSKERKKIQALLPDC 248

Query: 53  IENCRSLEE------LNANFNK-LRQLPDTIGFE-----------LINLKTLSINCNKIV 94
             + R +EE      LN    + L+ L  ++ ++           L NL++LS+    +V
Sbjct: 249 DIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFPLFSKEILRLKNLRSLSLYDTSLV 308

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY-------------- 140
            LP+ +  L  L  L   LN LKSLP+++  L NL  L+I  N ++              
Sbjct: 309 ALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLR 368

Query: 141 --------LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
                    +  P  I  L  LV L+V+ N++  LP+ IG L+ LQ L L  N L + P 
Sbjct: 369 SLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPS 428

Query: 193 DV 194
           ++
Sbjct: 429 EI 430



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 3/94 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +V+L+V++NQL  LP  IG L  L++LD+S N L +LP  I    +L EL   +N+++ L
Sbjct: 390 LVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTL 449

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSL 106
           P+ I   L NL+ L++  N I   PQ L  +  L
Sbjct: 450 PEEIA-RLQNLRKLTLYENPIP--PQELDKIRKL 480



 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 98/226 (43%), Gaps = 53/226 (23%)

Query: 22  QLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTI----G 77
           ++K LPN IG L  L + ++SGN L S+PK I N ++L  L    N+L+ LP  +     
Sbjct: 163 RIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQD 222

Query: 78  FELINL----------------------------------------------KTLSINCN 91
            E++NL                                               +LS+   
Sbjct: 223 LEVLNLLINPLLSKERKKIQALLPDCDIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQ 282

Query: 92  KIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLL 151
           +  +  + +  L +LR L      L +LP+++  L +LE L++  N   L++LP  IGLL
Sbjct: 283 QFPLFSKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLN--QLKSLPKEIGLL 340

Query: 152 MSLVELDV-SYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
            +L  LD+ + N+   LP  I  L+ L+ L L  N     P ++ E
Sbjct: 341 RNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWE 386



 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 2/69 (2%)

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           N+ +L++S+  Q     P  I  L  L  L +  N+ITTLP  I  L+ L++L L GN L
Sbjct: 38  NVRILDLSR--QKFAVFPKEIWELEYLEILKLEENRITTLPREINKLKNLKELYLNGNKL 95

Query: 188 VSPPMDVVE 196
              P ++ E
Sbjct: 96  TIVPKEIWE 104


>gi|260786058|ref|XP_002588076.1| hypothetical protein BRAFLDRAFT_123340 [Branchiostoma floridae]
 gi|229273233|gb|EEN44087.1| hypothetical protein BRAFLDRAFT_123340 [Branchiostoma floridae]
          Length = 2524

 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 134/273 (49%), Gaps = 57/273 (20%)

Query: 2    IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
            IPE +  +L  +  L +  N L  LP +I  L  ++++ +S N LE+LP  I   + L E
Sbjct: 1694 IPEEI-GQLKKLRELKLDRNLLTQLPQAITILPNVQIIQLSDNKLETLPDGISRLQ-LHE 1751

Query: 62   LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDA---------- 111
            L+ + N+ +++P+ +   L+ LKT S+  N +  LP  ++ LT +R +            
Sbjct: 1752 LDLDNNRFKKIPEEV-CSLLQLKTFSVASNPLKGLPDKISQLTGVRNMSIGRCQFKEFPR 1810

Query: 112  ---RLNCLKSL--------------PEDLENLINLEVLNISQNFQY--LETLPYSIGLLM 152
               +L  L+ L              PE++  L NL+VL++  N Q+  L++LP  +G L+
Sbjct: 1811 QVLQLEGLQKLYIGTWTVGGKPLPVPEEIGRLKNLQVLDLQHNLQHSGLKSLPDGVGELV 1870

Query: 153  SLVELDVSYNKITTLPDS-----------------------IGCLRKLQKLSLEGNPLVS 189
             L +L++S N+ T++PDS                       +  L KL+K+ + GNPL  
Sbjct: 1871 KLKDLNISANRFTSVPDSSMNLSSIEKLNMSGNRISRLPLTLSRLTKLKKMDISGNPLTY 1930

Query: 190  PPMDVVEQGLSAVKGYLSEKMNN--DHKSPKKK 220
            PP DV  +G +A+  +L  K+    D K  +K+
Sbjct: 1931 PPPDVCTEGTTAILDFLRRKLKQKEDEKELRKR 1963



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 91/184 (49%), Gaps = 9/184 (4%)

Query: 12   NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
            +++ +D+H   L  +P  +     ++ L +S N L S+P+ I   + L EL  + N L Q
Sbjct: 1657 DLLTVDLHGKGLTSVPAEVFDKRDIERLVLSNNRLTSIPEEIGQLKKLRELKLDRNLLTQ 1716

Query: 72   LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
            LP  I   L N++ + ++ NK+  LP  ++ L  L  LD   N  K +PE++ +L+ L+ 
Sbjct: 1717 LPQAITI-LPNVQIIQLSDNKLETLPDGISRL-QLHELDLDNNRFKKIPEEVCSLLQLKT 1774

Query: 132  LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL-----SLEGNP 186
             +++ N   L+ LP  I  L  +  + +   +    P  +  L  LQKL     ++ G P
Sbjct: 1775 FSVASN--PLKGLPDKISQLTGVRNMSIGRCQFKEFPRQVLQLEGLQKLYIGTWTVGGKP 1832

Query: 187  LVSP 190
            L  P
Sbjct: 1833 LPVP 1836



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 84/160 (52%), Gaps = 4/160 (2%)

Query: 23   LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELIN 82
            L CL      +  L  +D+ G  L S+P  + + R +E L  + N+L  +P+ IG +L  
Sbjct: 1645 LTCLALQPKVVDDLLTVDLHGKGLTSVPAEVFDKRDIERLVLSNNRLTSIPEEIG-QLKK 1703

Query: 83   LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
            L+ L ++ N +  LPQ++T L +++++    N L++LP+ +  L  L  L++  N    +
Sbjct: 1704 LRELKLDRNLLTQLPQAITILPNVQIIQLSDNKLETLPDGISRL-QLHELDLDNN--RFK 1760

Query: 143  TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
             +P  +  L+ L    V+ N +  LPD I  L  ++ +S+
Sbjct: 1761 KIPEEVCSLLQLKTFSVASNPLKGLPDKISQLTGVRNMSI 1800


>gi|149066147|gb|EDM16020.1| similar to PDZ-domain protein scribble (predicted), isoform CRA_d
           [Rattus norvegicus]
          Length = 1635

 Score = 97.4 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 109/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 116

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 117 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 174

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 175 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 188 VSPPMD 193
              P++
Sbjct: 233 EELPVE 238



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 65/193 (33%), Positives = 106/193 (54%), Gaps = 7/193 (3%)

Query: 1   MIPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRS 58
           ++PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   
Sbjct: 26  VVPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQ 83

Query: 59  LEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKS 118
           L EL+ + N + ++P++I F    L+    + N +  LP   T L SL  L      L++
Sbjct: 84  LVELDVSRNDIPEIPESIKF-CKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 119 LPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQ 178
           LP D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L+
Sbjct: 143 LPGDVGNLANLVTLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLR 200

Query: 179 KLSLEGNPLVSPP 191
           +L L+ N L + P
Sbjct: 201 ELWLDRNQLSALP 213



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 71/183 (38%), Positives = 100/183 (54%), Gaps = 4/183 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 150 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 209

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LPE +  L  L
Sbjct: 210 SALPPELG-NLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL 268

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL-V 188
            +L + QN   L  +  +IG   +L EL ++ N +T LP S+G L KL  L+++ N L V
Sbjct: 269 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVDRNHLEV 326

Query: 189 SPP 191
            PP
Sbjct: 327 LPP 329



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 139 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 198 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 236



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 120 LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 179 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPV 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L  L  L +SQN   L+ LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 238 ELGGLALLTDLLLSQNL--LQRLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 295

Query: 182 LEGNPLVSPP 191
           L  N L + P
Sbjct: 296 LTENLLTALP 305



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 188 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLT 246

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N L++LP+ IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 247 DLLLSQNLLQRLPEGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALP 305

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 306 RSLGKLTKLTNLNVDRN--HLEVLPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVL 363

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 364 DVAGNRLRSLPFALTHLNLKAL 385



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 48/136 (35%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP+++     L  
Sbjct: 258 LPEGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTN 316

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++ +LP  L H   L VLD   N L+SLP 
Sbjct: 317 LNVDRNHLEVLPPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPF 375

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 376 ALTHL-NLKALWLAEN 390



 Score = 57.4 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           LKC+P    C   ++ +D     L+ +P+ I    RSLEEL  + N+LR+LP    F L+
Sbjct: 2   LKCIP-LWRCNRHVESVDKRHCSLQVVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLL 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I                       + LP ++ N + L  L++S+N   +
Sbjct: 60  NLRKLGLSDNEI-----------------------QRLPPEVANFMQLVELDVSRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P SI    +L   D S N ++ LPD    LR L  L+L    L + P DV
Sbjct: 95  PEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDV 147


>gi|455790005|gb|EMF41901.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 488

 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 75/189 (39%), Positives = 108/189 (57%), Gaps = 10/189 (5%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTI---ENCRSLEELNAN 65
           RL N+  L ++   L  LP  I  L  L+ L +  N L+SLPK I    N RSL+ + AN
Sbjct: 293 RLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLD-IGAN 351

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
            N+   LP  I   L NL++L +N N+  I P+ +  L  L +L+   N L +LPE +  
Sbjct: 352 -NEFEVLPKEIA-RLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 409

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L  L++L++S N   L TLP  IG L +L EL + YN+I TLP+ I  L+ L+KL+L  N
Sbjct: 410 LKGLQMLDLSHN--RLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYEN 467

Query: 186 PLVSPPMDV 194
           P+  PP ++
Sbjct: 468 PI--PPQEL 474



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 95/180 (52%), Gaps = 3/180 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV +LD+   +    P  I  L  L++L +  N +  LP+ I   ++L+EL  N NKL  
Sbjct: 38  NVRILDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTI 97

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           +P  I +EL NL  L +  N+I  LP+ +    +L+ L+ R N L +LP ++       +
Sbjct: 98  VPKEI-WELENLTILRLENNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIG--ELKLL 154

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
             ++     ++ LP  IG L +L   ++S NK+ ++P  IG L+ L+ L LE N L + P
Sbjct: 155 EELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLP 214



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 88/161 (54%), Gaps = 3/161 (1%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           S +++LD+S       PK I     LE L    N++  LP  I  +L NLK L +N NK+
Sbjct: 37  SNVRILDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREIN-KLKNLKELYLNGNKL 95

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
            I+P+ +  L +L +L    N + +LP+++E   NL+ LN+  N   L TLP  IG L  
Sbjct: 96  TIVPKEIWELENLTILRLENNRISTLPKEIEKSKNLQELNLRGN--RLVTLPGEIGELKL 153

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L EL++  N+I  LP+ IG L  L   +L GN L S P ++
Sbjct: 154 LEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEI 194



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 22/148 (14%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L ++ N+L  +P  I  L  L +L +  N + +LPK IE  ++L+ELN   N+
Sbjct: 81  KLKNLKELYLNGNKLTIVPKEIWELENLTILRLENNRISTLPKEIEKSKNLQELNLRGNR 140

Query: 69  LRQLPDTIGF----------------------ELINLKTLSINCNKIVILPQSLTHLTSL 106
           L  LP  IG                        L NL   +++ NK+  +P+ + +L +L
Sbjct: 141 LVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNL 200

Query: 107 RVLDARLNCLKSLPEDLENLINLEVLNI 134
           R+L    N LK+LP  +E L +LEVLN+
Sbjct: 201 RMLYLENNQLKTLPRQMEKLQDLEVLNL 228



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 1/102 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ARL N+  L ++ N+ K  P  I  L KL +L+V+ N L++LP+ I   + L+ L+ + N
Sbjct: 362 ARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHN 421

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           +L  LP  IG +L NL  L +  N+I  LP+ +  L +LR L
Sbjct: 422 RLTTLPSEIG-QLHNLTELYLQYNRIKTLPEEIARLQNLRKL 462



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 111/242 (45%), Gaps = 50/242 (20%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLES---------LPKT 52
           IP+ +   L N+ +L + +NQLK LP  +  L  L+VL++  N L S         LP  
Sbjct: 190 IPKEI-GNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSEERKKIQALLPDC 248

Query: 53  IENCRSLEE------LNANFNK-LRQLPDTIGFE-----------LINLKTLSINCNKIV 94
             + R +EE      LN    + L+ L  ++ ++           L NL++LS+    +V
Sbjct: 249 DIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFPLFSKEILRLKNLRSLSLYDTSLV 308

Query: 95  ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY-------------- 140
            LP+ +  L  L  L   LN LKSLP+++  L NL  L+I  N ++              
Sbjct: 309 ALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLR 368

Query: 141 --------LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
                    +  P  I  L  LV L+V+ N++  LP+ IG L+ LQ L L  N L + P 
Sbjct: 369 SLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPS 428

Query: 193 DV 194
           ++
Sbjct: 429 EI 430



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 3/94 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +V+L+V++NQL  LP  IG L  L++LD+S N L +LP  I    +L EL   +N+++ L
Sbjct: 390 LVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTL 449

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSL 106
           P+ I   L NL+ L++  N I   PQ L  +  L
Sbjct: 450 PEEIA-RLQNLRKLTLYENPIP--PQELDKIRKL 480



 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 98/226 (43%), Gaps = 53/226 (23%)

Query: 22  QLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTI----G 77
           ++K LPN IG L  L + ++SGN L S+PK I N ++L  L    N+L+ LP  +     
Sbjct: 163 RIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQD 222

Query: 78  FELINL----------------------------------------------KTLSINCN 91
            E++NL                                               +LS+   
Sbjct: 223 LEVLNLLINPLLSEERKKIQALLPDCDIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQ 282

Query: 92  KIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLL 151
           +  +  + +  L +LR L      L +LP+++  L +LE L++  N   L++LP  IGLL
Sbjct: 283 QFPLFSKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLN--QLKSLPKEIGLL 340

Query: 152 MSLVELDV-SYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
            +L  LD+ + N+   LP  I  L+ L+ L L  N     P ++ E
Sbjct: 341 RNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWE 386


>gi|410987956|ref|XP_004001475.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog [Felis
           catus]
          Length = 1223

 Score = 97.4 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 109/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 6   RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 65

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LP+  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 66  LSRLPE--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 123

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++TLP  +G LR+L  L +  N L
Sbjct: 124 KLEQLDLGGN--ELEVLPDTLGALPNLRELWLDRNQLSTLPPELGNLRRLVCLDVSENRL 181

Query: 188 VSPPMD 193
              P +
Sbjct: 182 EELPSE 187



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 65/161 (40%), Positives = 84/161 (52%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP+     RSL  L  N  
Sbjct: 28  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDV 87

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 88  SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNELEVLPDTLGALP 146

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L TLP  +G L  LV LDVS N++  LP
Sbjct: 147 NLRELWLDRN--QLSTLPPELGNLRRLVCLDVSENRLEELP 185



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 69/190 (36%), Positives = 105/190 (55%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 69  LPEGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 127

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 128 LDLGGNELEVLPDTLG-ALPNLRELWLDRNQLSTLPPELGNLRRLVCLDVSENRLEELPS 186

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L+ L  L +SQN   L+ LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 187 ELGGLLLLTDLLLSQNL--LQRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 244

Query: 182 LEGNPLVSPP 191
           L  N L + P
Sbjct: 245 LTENLLTALP 254



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 70/183 (38%), Positives = 99/183 (54%), Gaps = 4/183 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 99  LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNELEVLPDTLGALPNLRELWLDRNQL 158

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LP+ +  L  L
Sbjct: 159 STLPPELG-NLRRLVCLDVSENRLEELPSELGGLLLLTDLLLSQNLLQRLPDGIGQLKQL 217

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL-V 188
            +L + QN   L  +  +IG   +L EL ++ N +T LP S+G L KL  L+ + N L V
Sbjct: 218 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNADRNRLEV 275

Query: 189 SPP 191
            PP
Sbjct: 276 LPP 278



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 68/202 (33%), Positives = 103/202 (50%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 137 VLPDTLGA-LPNLRELWLDRNQLSTLPPELGNLRRLVCLDVSENRLEELPSELGGLLLLT 195

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N L++LPD IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 196 DLLLSQNLLQRLPDGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALP 254

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN  +N   LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 255 RSLGKLTKLTNLNADRN--RLEVLPPEIGGCVALSVLSLRDNRLAALPPELAHTAELHVL 312

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 313 DVAGNRLRSLPFALTHLNLKAL 334



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP+++     L  
Sbjct: 207 LPDGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTN 265

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LNA+ N+L  LP  IG   + L  LS+  N++  LP  L H   L VLD   N L+SLP 
Sbjct: 266 LNADRNRLEVLPPEIG-GCVALSVLSLRDNRLAALPPELAHTAELHVLDVAGNRLRSLPF 324

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 325 ALTHL-NLKALWLAEN 339



 Score = 54.3 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 48/160 (30%)

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLN----------------------- 114
           F L+NL+ L ++ N+I  LP  + +   L  LD   N                       
Sbjct: 5   FRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGN 64

Query: 115 -----------------------CLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLL 151
                                   L++LP D+ NL NL  L + +N   L++LP S+  L
Sbjct: 65  PLSRLPEGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENL--LKSLPASLSFL 122

Query: 152 MSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           + L +LD+  N++  LPD++G L  L++L L+ N L + P
Sbjct: 123 VKLEQLDLGGNELEVLPDTLGALPNLRELWLDRNQLSTLP 162


>gi|156400914|ref|XP_001639037.1| predicted protein [Nematostella vectensis]
 gi|156226162|gb|EDO46974.1| predicted protein [Nematostella vectensis]
          Length = 414

 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 77/217 (35%), Positives = 123/217 (56%), Gaps = 6/217 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+ VL +  N+L  LP+ +  L  L++LD S N +  +P+TI++C++L+E++A+ N +
Sbjct: 47  LQNLQVLGLSDNELTILPSVLSNLVNLRILDFSKNGIIDIPETIKHCKNLQEIDASVNPI 106

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+T    L NL  L +N   +  LP +   L SLR+L+ R N L+ LP+ +  L NL
Sbjct: 107 GKIPETFC-HLANLTHLYLNDAFLDFLPGNFGRLISLRILELRENHLRVLPKSMSQLKNL 165

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           E L+I  N ++ E LP  +G L++L EL +  N I  L   IG LR+L  L +  N L  
Sbjct: 166 ERLDIGNN-EFTE-LPMVVGCLLNLTELWMDSNAIKELRPEIGLLRRLMFLDVSKNRLEW 223

Query: 190 PPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKL 226
            P + +E   S    YLS  +  +   P++   +GKL
Sbjct: 224 LPPE-IESLQSLTDLYLSNNLLIE--IPEQIGALGKL 257



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 101/178 (56%), Gaps = 3/178 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           LLN+  L + SN +K L   IG L +L  LDVS N LE LP  IE+ +SL +L  + N L
Sbjct: 185 LLNLTELWMDSNAIKELRPEIGLLRRLMFLDVSKNRLEWLPPEIESLQSLTDLYLSNNLL 244

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P+ IG  L  L+TL +  N +  LP S+  L  L  L    N L SLP  L  L  L
Sbjct: 245 IEIPEQIG-ALGKLQTLKLEENHLGELPNSIGKLVELEELILTCNELVSLPPSLGYLRKL 303

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            VLNI +NF  LE++P  +G   ++  L +  N++  LPDSIG + KLQ ++L  N L
Sbjct: 304 RVLNIDENF--LESIPSELGSCTAMTILSLRDNRLVHLPDSIGRMPKLQVINLASNRL 359



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 104/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL+++ +L++  N L+ LP S+  L  L+ LD+  N    LP  +    +L EL  + N
Sbjct: 137 GRLISLRILELRENHLRVLPKSMSQLKNLERLDIGNNEFTELPMVVGCLLNLTELWMDSN 196

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            +++L   IG  L  L  L ++ N++  LP  +  L SL  L    N L  +PE +  L 
Sbjct: 197 AIKELRPEIGL-LRRLMFLDVSKNRLEWLPPEIESLQSLTDLYLSNNLLIEIPEQIGALG 255

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L + +N  +L  LP SIG L+ L EL ++ N++ +LP S+G LRKL+ L+++ N L
Sbjct: 256 KLQTLKLEEN--HLGELPNSIGKLVELEELILTCNELVSLPPSLGYLRKLRVLNIDENFL 313

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 314 ESIPSEL 320



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 99/191 (51%), Gaps = 4/191 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P+S+ ++L N+  LD+ +N+   LP  +GCL  L  L +  N ++ L   I   R L 
Sbjct: 154 VLPKSM-SQLKNLERLDIGNNEFTELPMVVGCLLNLTELWMDSNAIKELRPEIGLLRRLM 212

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+ + N+L  LP  I   L +L  L ++ N ++ +P+ +  L  L+ L    N L  LP
Sbjct: 213 FLDVSKNRLEWLPPEIE-SLQSLTDLYLSNNLLIEIPEQIGALGKLQTLKLEENHLGELP 271

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             +  L+ LE L ++ N   L +LP S+G L  L  L++  N + ++P  +G    +  L
Sbjct: 272 NSIGKLVELEELILTCN--ELVSLPPSLGYLRKLRVLNIDENFLESIPSELGSCTAMTIL 329

Query: 181 SLEGNPLVSPP 191
           SL  N LV  P
Sbjct: 330 SLRDNRLVHLP 340



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 84/159 (52%), Gaps = 22/159 (13%)

Query: 57  RSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
           ++LEE+  + N+LR LP  + F L NL+ L ++ N++ ILP  L++L +LR+LD   N +
Sbjct: 25  KALEEVYLDANQLRDLPRGL-FNLQNLQVLGLSDNELTILPSVLSNLVNLRILDFSKNGI 83

Query: 117 KSLPEDLENLINLEVLNISQ---------------------NFQYLETLPYSIGLLMSLV 155
             +PE +++  NL+ ++ S                      N  +L+ LP + G L+SL 
Sbjct: 84  IDIPETIKHCKNLQEIDASVNPIGKIPETFCHLANLTHLYLNDAFLDFLPGNFGRLISLR 143

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            L++  N +  LP S+  L+ L++L +  N     PM V
Sbjct: 144 ILELRENHLRVLPKSMSQLKNLERLDIGNNEFTELPMVV 182



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 2/136 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE + A L  +  L +  N L  LPNSIG L +L+ L ++ N L SLP ++   R L  
Sbjct: 247 IPEQIGA-LGKLQTLKLEENHLGELPNSIGKLVELEELILTCNELVSLPPSLGYLRKLRV 305

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  +P  +G     +  LS+  N++V LP S+  +  L+V++   N L+ LP 
Sbjct: 306 LNIDENFLESIPSELG-SCTAMTILSLRDNRLVHLPDSIGRMPKLQVINLASNRLEYLPY 364

Query: 122 DLENLINLEVLNISQN 137
               L++L+ L +S+N
Sbjct: 365 SFHKLVSLKALWLSEN 380


>gi|51476914|emb|CAH18423.1| hypothetical protein [Homo sapiens]
          Length = 1530

 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ LP SIG L  L  LD+S N +E++   I  C +LE+
Sbjct: 192 LPEVLD-QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALED 250

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+QLPD+IG  L  L TL ++ N++ +LP ++ +L+ L   D   N L+SLP 
Sbjct: 251 LLLSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPS 309

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L  L + +NF  L  LP  IG   ++  + +  NK+  LP+ IG ++KL+  +
Sbjct: 310 TIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVPN 367

Query: 182 LEGN 185
           L  N
Sbjct: 368 LSDN 371



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 108/233 (46%), Gaps = 50/233 (21%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP +I  L  LK LD+S N ++  P+ I+ C+ L 
Sbjct: 52  EELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLT 111

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   L  LR+L+ R N LK+L
Sbjct: 112 IIEASVNPISKLPD--GFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTL 169

Query: 120 PEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELD 158
           P+ +  L  LE L++  N                        L+ LP SIG L  LV LD
Sbjct: 170 PKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD 229

Query: 159 VSYNKITT-----------------------LPDSIGCLRKLQKLSLEGNPLV 188
           +S N+I T                       LPDSIG L+KL  L ++ N L 
Sbjct: 230 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLT 282



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/148 (39%), Positives = 85/148 (57%), Gaps = 3/148 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP+SIG L KL  L V  N L  LP TI N   LEE + + N+L  LP TIG+ 
Sbjct: 255 SNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGY- 313

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+TL+++ N +  LP+ +    ++ V+  R N L+ LPE++  +  L V N+S N  
Sbjct: 314 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVPNLSDN-- 371

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+ LP+S   L  L  L +S N+   L
Sbjct: 372 RLKNLPFSFTKLKELAALWLSDNQSKAL 399



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 69  LRQLP-DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L+Q+P +   FE   L+ L ++ N+I  LP+ L +  +LR L    N L +LP  + +L+
Sbjct: 27  LQQVPKEVFNFERT-LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLV 85

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           NL+ L+IS+N   ++  P +I     L  ++ S N I+ LPD    L  L +L L
Sbjct: 86  NLKELDISKNG--VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYL 138



 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 37/61 (60%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP  IG + KL+V ++S N L++LP +    + L  L  + N+ + 
Sbjct: 339 NVTVMSLRSNKLEFLPEEIGQMQKLRVPNLSDNRLKNLPFSFTKLKELAALWLSDNQSKA 398

Query: 72  L 72
           L
Sbjct: 399 L 399


>gi|432855257|ref|XP_004068131.1| PREDICTED: leucine-rich repeat-containing protein 7-like [Oryzias
           latipes]
          Length = 1635

 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 104/184 (56%), Gaps = 4/184 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L  ++ N+  L + +N L+ +P SIG L +L+ LD++ N +E+L   +  C +LE+
Sbjct: 234 VPEVL-EQIHNLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIETLDSDVSGCEALED 292

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N L+ LPD+IG  L  L TL ++ N++  LP ++  L+ L   D   N L+SLP 
Sbjct: 293 LLLSSNMLQHLPDSIGM-LKKLTTLKVDDNQLTSLPHTIGSLSLLEEFDCSCNELESLPP 351

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L +L      +NF  L  LP  IG   ++  + +  NK+  LPD IG + KL+ L+
Sbjct: 352 TIGYLHSLRTFAADENF--LTELPREIGNCRNVTVMSLRSNKLEFLPDEIGQMTKLRVLN 409

Query: 182 LEGN 185
           L  N
Sbjct: 410 LSDN 413



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 110/191 (57%), Gaps = 5/191 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +LLN+  L ++   L+ LP + G LSKL++L++  N L+++PK+I     LE 
Sbjct: 165 LPDGFT-QLLNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLTQLER 223

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+  ++P+ +  ++ NLK L ++ N +  +P S+  L  LR LD   N +++L  
Sbjct: 224 LDLGSNEFSEVPEVLE-QIHNLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIETLDS 282

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           D+     LE L +S N   L+ LP SIG+L  L  L V  N++T+LP +IG L  L++  
Sbjct: 283 DVSGCEALEDLLLSSNM--LQHLPDSIGMLKKLTTLKVDDNQLTSLPHTIGSLSLLEEFD 340

Query: 182 LEGNPLVS-PP 191
              N L S PP
Sbjct: 341 CSCNELESLPP 351



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 111/239 (46%), Gaps = 50/239 (20%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP +I  L  LK LD+S N ++  P  I+ C+ L 
Sbjct: 94  EELPKQLFNCQALKKLSMPDNDLSNLPTTIASLVNLKELDISKNGIQEFPDNIKCCKGLS 153

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   L+ LR+L+ R N LK++
Sbjct: 154 VVEASVNPITKLPD--GFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTM 211

Query: 120 PEDLENLINLEVLNISQNF---------------------QYLETLPYSIGLLMSLVELD 158
           P+ +  L  LE L++  N                        L+T+P SIG L  L  LD
Sbjct: 212 PKSIHRLTQLERLDLGSNEFSEVPEVLEQIHNLKELWLDNNSLQTIPGSIGKLRQLRYLD 271

Query: 159 VSYNKITT-----------------------LPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           ++ N+I T                       LPDSIG L+KL  L ++ N L S P  +
Sbjct: 272 LAKNRIETLDSDVSGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQLTSLPHTI 330



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 101/187 (54%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL  + +L++  N LK +P SI  L++L+ LD+  N    +P+ +E   +L+EL  + N
Sbjct: 193 GRLSKLRILELRENHLKTMPKSIHRLTQLERLDLGSNEFSEVPEVLEQIHNLKELWLDNN 252

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ +P +IG +L  L+ L +  N+I  L   ++   +L  L    N L+ LP+ +  L 
Sbjct: 253 SLQTIPGSIG-KLRQLRYLDLAKNRIETLDSDVSGCEALEDLLLSSNMLQHLPDSIGMLK 311

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L  L +  N   L +LP++IG L  L E D S N++ +LP +IG L  L+  + + N L
Sbjct: 312 KLTTLKVDDN--QLTSLPHTIGSLSLLEEFDCSCNELESLPPTIGYLHSLRTFAADENFL 369

Query: 188 VSPPMDV 194
              P ++
Sbjct: 370 TELPREI 376



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L+ LP+SIG L KL  L V  N L SLP TI +   LEE + + N+L  LP TIG+ 
Sbjct: 297 SNMLQHLPDSIGMLKKLTTLKVDDNQLTSLPHTIGSLSLLEEFDCSCNELESLPPTIGY- 355

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L +L+T + + N +  LP+ + +  ++ V+  R N L+ LP+++  +  L VLN+S N  
Sbjct: 356 LHSLRTFAADENFLTELPREIGNCRNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDN-- 413

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTL 167
            L+ LP++   L  L  L +S N+   L
Sbjct: 414 RLKNLPFTFTKLKDLAALWLSDNQSKAL 441



 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 15/164 (9%)

Query: 25  CLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE-----LNANFNKLRQLPDTI-GF 78
           C  +S+ CL       + G L+         C   EE     L+ +   L+Q+P  I  F
Sbjct: 26  CFHSSVQCLEMTTKRKLIGRLVPC------RCFRGEEEVISVLDYSHCSLQQVPKEIFSF 79

Query: 79  ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNF 138
           E   L+ L ++ N+I  LP+ L +  +L+ L    N L +LP  + +L+NL+ L+IS+N 
Sbjct: 80  ERT-LEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSNLPTTIASLVNLKELDISKNG 138

Query: 139 QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
             ++  P +I     L  ++ S N IT LPD    L  L +L L
Sbjct: 139 --IQEFPDNIKCCKGLSVVEASVNPITKLPDGFTQLLNLTQLFL 180



 Score = 43.9 bits (102), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 40/61 (65%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV V+ + SN+L+ LP+ IG ++KL+VL++S N L++LP T    + L  L  + N+ + 
Sbjct: 381 NVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTKLKDLAALWLSDNQSKA 440

Query: 72  L 72
           L
Sbjct: 441 L 441


>gi|72080205|ref|XP_792673.1| PREDICTED: uncharacterized protein LOC587871 [Strongylocentrotus
           purpuratus]
          Length = 548

 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 108/206 (52%), Gaps = 26/206 (12%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
            + VL++ +N+L  LP  IG L  L+ L +  N LE LPK I N   L+EL+   N L+ 
Sbjct: 218 QLTVLNLSNNRLVSLPEEIGLLGGLEQLFLQYNCLEKLPKCIGNFSHLQELDCKNNHLQS 277

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP T+G  L  L  L++  N +  L  S+  LT L  L A  N L SLP+++ NL+NL  
Sbjct: 278 LPSTLG-RLSILVILNVTNNLLTELTGSIGQLTHLEELCAHSNQLTSLPDEMCNLVNLTA 336

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSY-----------------------NKITTLP 168
           L + +N  +L +LP + G L+ L ELD+S                        N++T+LP
Sbjct: 337 LYVGEN--HLRSLPSAFGRLVRLTELDLSSCELTHLPASLSRCTSLNKVWLSNNRLTSLP 394

Query: 169 DSIGCLRKLQKLSLEGNPLVSPPMDV 194
           D IG L +L++L +  NPL   P  +
Sbjct: 395 DQIGRLHRLKELHVRNNPLKYFPASL 420



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 77/135 (57%), Gaps = 2/135 (1%)

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           E++ ++  L+  P  IG+    L  L+++ N++V LP+ +  L  L  L  + NCL+ LP
Sbjct: 197 EVDISYMNLKCCPQLIGYVGRQLTVLNLSNNRLVSLPEEIGLLGGLEQLFLQYNCLEKLP 256

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           + + N  +L+ L+   N  +L++LP ++G L  LV L+V+ N +T L  SIG L  L++L
Sbjct: 257 KCIGNFSHLQELDCKNN--HLQSLPSTLGRLSILVILNVTNNLLTELTGSIGQLTHLEEL 314

Query: 181 SLEGNPLVSPPMDVV 195
               N L S P ++ 
Sbjct: 315 CAHSNQLTSLPDEMC 329



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 87/178 (48%), Gaps = 11/178 (6%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P +L  RL  +V+L+V +N L  L  SIG L+ L+ L    N L SLP  + N  +L  
Sbjct: 278 LPSTL-GRLSILVILNVTNNLLTELTGSIGQLTHLEELCAHSNQLTSLPDEMCNLVNLTA 336

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N LR LP   G  L+ L  L ++  ++  LP SL+  TSL  +    N L SLP+
Sbjct: 337 LYVGENHLRSLPSAFG-RLVRLTELDLSSCELTHLPASLSRCTSLNKVWLSNNRLTSLPD 395

Query: 122 DLENLINLEVLNISQN--------FQYLETLPYSIGLLMSLVELDVSY-NKITTLPDS 170
            +  L  L+ L++  N          YL+   +S+     L E D    +K+T  P++
Sbjct: 396 QIGRLHRLKELHVRNNPLKYFPASLSYLQLYTFSVNQDKLLDEWDQEVTSKLTFRPET 453


>gi|320162772|gb|EFW39671.1| leucine-rich repeat protein SHOC-2 [Capsaspora owczarzaki ATCC
           30864]
          Length = 490

 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 124/255 (48%), Gaps = 49/255 (19%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNL--------------- 45
           ++P  + ++L+NV  L +  N    +P  +G L+KL++ ++  N                
Sbjct: 171 VLPTGILSQLVNVNNLQLSRNNFTTIPADLGALTKLEIFNMDNNSVREIPAGIFSSLKLL 230

Query: 46  ---------LESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVIL 96
                    + S+P  I +  SL E+N   NKL  LP+T+G +L+NL++L +  N +  L
Sbjct: 231 GKINLNYNSITSIPNDIGDLVSLREINLGSNKLELLPETLG-QLVNLESLVLGNNNLSAL 289

Query: 97  PQSLTHLTSLRVLD----------------------ARLNCLKSLPEDLENLINLEVLNI 134
           P+S + L  LRVLD                      A+ N L +LP+ L NL  L +  +
Sbjct: 290 PESASRLVKLRVLDLEGNRLTRLPEIGSLAALEELHAQSNRLTALPQSLGNLHALRLFYV 349

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            +N   L  LP SIG L SL    V+ N+++ +P  +    KLQ L+L+ NPL + P +V
Sbjct: 350 GEN--QLTELPLSIGQLKSLTSFHVNDNRLSDVPCELANCLKLQLLNLDDNPLTAIPPNV 407

Query: 195 VEQGLSAVKGYLSEK 209
              G SAV  YL +K
Sbjct: 408 TSGGPSAVMVYLRKK 422



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 106/216 (49%), Gaps = 5/216 (2%)

Query: 22  QLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELI 81
           QL  LP+ +  L  L VLD+  N    +P  I   + L +L   +NKL  +   IG  L 
Sbjct: 7   QLTSLPDELELLKNLNVLDLRHNKFTEVPPVIYRMKQLSKLYLRYNKLTWISHDIG-NLT 65

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
            L  LSI  NKI  LP SL +L  L++LD   NCL +LP  +  L  L  LN+   +  L
Sbjct: 66  GLNILSIRNNKITELPASLGNLAGLQILDLMNNCLTALPSSIGKLSRLSSLNVE--YNKL 123

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSA 201
           E LP  IG L+ L    + YN +  LP +I     L++L++EGN LV  P  ++ Q ++ 
Sbjct: 124 ERLPEEIGNLVKLKHFGLRYNSLVELPLAIKNCVLLEELNVEGNKLVVLPTGILSQLVNV 183

Query: 202 VKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGALR 237
               LS   NN    P     + KL  +   N ++R
Sbjct: 184 NNLQLSR--NNFTTIPADLGALTKLEIFNMDNNSVR 217



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 98/176 (55%), Gaps = 1/176 (0%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L+V  N+L+ LP  IG L KLK   +  N L  LP  I+NC  LEELN   NKL  LP  
Sbjct: 116 LNVEYNKLERLPEEIGNLVKLKHFGLRYNSLVELPLAIKNCVLLEELNVEGNKLVVLPTG 175

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           I  +L+N+  L ++ N    +P  L  LT L + +   N ++ +P  + + + L +  I+
Sbjct: 176 ILSQLVNVNNLQLSRNNFTTIPADLGALTKLEIFNMDNNSVREIPAGIFSSLKL-LGKIN 234

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            N+  + ++P  IG L+SL E+++  NK+  LP+++G L  L+ L L  N L + P
Sbjct: 235 LNYNSITSIPNDIGDLVSLREINLGSNKLELLPETLGQLVNLESLVLGNNNLSALP 290



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 93/175 (53%), Gaps = 4/175 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  + + IG L+ L +L +  N +  LP ++ N   L+ L+   N L  LP +IG +L
Sbjct: 52  NKLTWISHDIGNLTGLNILSIRNNKITELPASLGNLAGLQILDLMNNCLTALPSSIG-KL 110

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
             L +L++  NK+  LP+ + +L  L+    R N L  LP  ++N + LE LN+  N   
Sbjct: 111 SRLSSLNVEYNKLERLPEEIGNLVKLKHFGLRYNSLVELPLAIKNCVLLEELNVEGN--K 168

Query: 141 LETLPYSI-GLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           L  LP  I   L+++  L +S N  TT+P  +G L KL+  +++ N +   P  +
Sbjct: 169 LVVLPTGILSQLVNVNNLQLSRNNFTTIPADLGALTKLEIFNMDNNSVREIPAGI 223


>gi|73669930|ref|YP_305945.1| hypothetical protein Mbar_A2449 [Methanosarcina barkeri str.
           Fusaro]
 gi|72397092|gb|AAZ71365.1| hypothetical protein Mbar_A2449 [Methanosarcina barkeri str.
           Fusaro]
          Length = 886

 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 110/211 (52%), Gaps = 3/211 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL N+  LD++ N L  L   I  L  L  L++S N L  LP  I     L +L   +N
Sbjct: 36  GRLENLKELDLYDNDLTELTPKIKELKNLNELNLSRNHLTLLPPEIGELGKLTKLYLFYN 95

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L +LP  I  +L NL  + +  N++ +LP  +  L  L       N L  LP ++  L 
Sbjct: 96  QLIKLPPEIR-KLKNLTEIDLTGNQLTLLPSEIGELGKLTKFSLYHNKLAQLPPEIGKLE 154

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NLE L+IS N   L  LP  IG L +LV+L + +N +  LP  I  L KL++L +  NPL
Sbjct: 155 NLEELDISNN--QLTQLPPEIGKLRNLVKLSLCHNNLEELPPEISELTKLKQLDISYNPL 212

Query: 188 VSPPMDVVEQGLSAVKGYLSEKMNNDHKSPK 218
           +SPP ++V +G+ A+  YL +    ++   K
Sbjct: 213 LSPPPEIVSRGMDAILTYLKQTKTTENNEAK 243


>gi|47228901|emb|CAG09416.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 452

 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 110/193 (56%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES   +L N+  L ++   L+ LP +IG L+ L  L++  NLL  LP+++     LEE
Sbjct: 120 LPESF-PKLRNLTCLSINDISLQVLPENIGNLANLVSLELRENLLTFLPESLSMLHRLEE 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+L  LP++IG  L+ LK L ++ N++  +P  +  + +L  LD   N ++ LPE
Sbjct: 179 LDLGNNELYSLPESIG-HLVGLKDLWLDGNQLTEIPAEMGSMKNLLCLDVSENKIERLPE 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L++L  L +SQN   ++ LP SIG L  L  L    N++T LP+SIG    L +L 
Sbjct: 238 ELGGLLSLADLLVSQNL--IDALPESIGKLRKLSILKADQNRLTYLPESIGNCESLTELV 295

Query: 182 LEGNPLVSPPMDV 194
           L  N + S P  +
Sbjct: 296 LTENKIQSLPRSI 308



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/194 (37%), Positives = 111/194 (57%), Gaps = 4/194 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++PE++   L N+V L++  N L  LP S+  L +L+ LD+  N L SLP++I +   L+
Sbjct: 142 VLPENI-GNLANLVSLELRENLLTFLPESLSMLHRLEELDLGNNELYSLPESIGHLVGLK 200

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N+L ++P  +G  + NL  L ++ NKI  LP+ L  L SL  L    N + +LP
Sbjct: 201 DLWLDGNQLTEIPAEMG-SMKNLLCLDVSENKIERLPEELGGLLSLADLLVSQNLIDALP 259

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E +  L  L +L   QN   L  LP SIG   SL EL ++ NKI +LP SIG L++L   
Sbjct: 260 ESIGKLRKLSILKADQN--RLTYLPESIGNCESLTELVLTENKIQSLPRSIGKLKQLFNF 317

Query: 181 SLEGNPLVSPPMDV 194
           + + N L S P ++
Sbjct: 318 NCDRNQLTSLPKEI 331



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI   S L+V D SGN L  LP++    R+L  L+ N  
Sbjct: 79  ANFMELVELDVSRNDIMEIPESISFCSALQVADFSGNPLTRLPESFPKLRNLTCLSINDI 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP+ IG  L NL +L +  N +  LP+SL+ L  L  LD   N L SLPE + +L+
Sbjct: 139 SLQVLPENIG-NLANLVSLELRENLLTFLPESLSMLHRLEELDLGNNELYSLPESIGHLV 197

Query: 128 -----------------------NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                                  NL  L++S+N   +E LP  +G L+SL +L VS N I
Sbjct: 198 GLKDLWLDGNQLTEIPAEMGSMKNLLCLDVSEN--KIERLPEELGGLLSLADLLVSQNLI 255

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP+SIG LRKL  L  + N L   P  +
Sbjct: 256 DALPESIGKLRKLSILKADQNRLTYLPESI 285



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 103/186 (55%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           R L  ++LD  +NQL+ LP     L KL+ L +S N ++ +P  I N   L EL+ + N 
Sbjct: 36  RSLEELLLD--ANQLRDLPKQFFHLVKLRKLGLSDNEIQRIPPEIANFMELVELDVSRND 93

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           + ++P++I F    L+    + N +  LP+S   L +L  L      L+ LPE++ NL N
Sbjct: 94  IMEIPESISF-CSALQVADFSGNPLTRLPESFPKLRNLTCLSINDISLQVLPENIGNLAN 152

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L  L + +N   L  LP S+ +L  L ELD+  N++ +LP+SIG L  L+ L L+GN L 
Sbjct: 153 LVSLELRENL--LTFLPESLSMLHRLEELDLGNNELYSLPESIGHLVGLKDLWLDGNQLT 210

Query: 189 SPPMDV 194
             P ++
Sbjct: 211 EIPAEM 216



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 109/196 (55%), Gaps = 4/196 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +PESL+  L  +  LD+ +N+L  LP SIG L  LK L + GN L  +P  + + ++L 
Sbjct: 165 FLPESLSM-LHRLEELDLGNNELYSLPESIGHLVGLKDLWLDGNQLTEIPAEMGSMKNLL 223

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            L+ + NK+ +LP+ +G  L++L  L ++ N I  LP+S+  L  L +L A  N L  LP
Sbjct: 224 CLDVSENKIERLPEELG-GLLSLADLLVSQNLIDALPESIGKLRKLSILKADQNRLTYLP 282

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           E + N  +L  L +++N   +++LP SIG L  L   +   N++T+LP  IG  + L   
Sbjct: 283 ESIGNCESLTELVLTEN--KIQSLPRSIGKLKQLFNFNCDRNQLTSLPKEIGGCQSLNVF 340

Query: 181 SLEGNPLVSPPMDVVE 196
            +  N L   P ++ +
Sbjct: 341 CVRENRLTRIPSELSQ 356



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 73/136 (53%), Gaps = 2/136 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE L   LL++  L V  N +  LP SIG L KL +L    N L  LP++I NC SL E
Sbjct: 235 LPEELGG-LLSLADLLVSQNLIDALPESIGKLRKLSILKADQNRLTYLPESIGNCESLTE 293

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    NK++ LP +IG +L  L   + + N++  LP+ +    SL V   R N L  +P 
Sbjct: 294 LVLTENKIQSLPRSIG-KLKQLFNFNCDRNQLTSLPKEIGGCQSLNVFCVRENRLTRIPS 352

Query: 122 DLENLINLEVLNISQN 137
           +L     L VL++S N
Sbjct: 353 ELSQATELHVLDVSGN 368



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/152 (35%), Positives = 83/152 (54%), Gaps = 3/152 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N++ LDV  N+++ LP  +G L  L  L VS NL+++LP++I   R L  L A+ N+L  
Sbjct: 221 NLLCLDVSENKIERLPEELGGLLSLADLLVSQNLIDALPESIGKLRKLSILKADQNRLTY 280

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP++IG    +L  L +  NKI  LP+S+  L  L   +   N L SLP+++    +L V
Sbjct: 281 LPESIG-NCESLTELVLTENKIQSLPRSIGKLKQLFNFNCDRNQLTSLPKEIGGCQSLNV 339

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
             + +N   L  +P  +     L  LDVS N+
Sbjct: 340 FCVREN--RLTRIPSELSQATELHVLDVSGNR 369



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 2/126 (1%)

Query: 57  RSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL 116
           R +E ++     L  +PD I     +L+ L ++ N++  LP+   HL  LR L    N +
Sbjct: 12  RHVEVIDKRHCSLLFVPDEIYRYERSLEELLLDANQLRDLPKQFFHLVKLRKLGLSDNEI 71

Query: 117 KSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
           + +P ++ N + L  L++S+N   +  +P SI    +L   D S N +T LP+S   LR 
Sbjct: 72  QRIPPEIANFMELVELDVSRN--DIMEIPESISFCSALQVADFSGNPLTRLPESFPKLRN 129

Query: 177 LQKLSL 182
           L  LS+
Sbjct: 130 LTCLSI 135


>gi|390370821|ref|XP_001195669.2| PREDICTED: uncharacterized protein LOC756567 [Strongylocentrotus
           purpuratus]
          Length = 548

 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 108/205 (52%), Gaps = 26/205 (12%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           + VL++ +N+L  LP  IG L  L+ L +  N LE LPK I N   L+EL+   N L+ L
Sbjct: 219 LTVLNLSNNRLVSLPEEIGLLGGLEQLFLQYNCLEKLPKCIGNFSHLQELDCKNNHLQSL 278

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P T+G  L  L  L++  N +  L  S+  LT L  L A  N L SLP+++ NL+NL  L
Sbjct: 279 PSTLG-RLSILVILNVTNNLLTELTGSIGQLTHLEELCAHSNQLTSLPDEMCNLVNLTAL 337

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSY-----------------------NKITTLPD 169
            + +N  +L +LP + G L+ L ELD+S                        N++T+LPD
Sbjct: 338 YVGEN--HLRSLPSAFGRLVRLTELDLSSCELTHLPASLSRCTSLNKVWLSNNRLTSLPD 395

Query: 170 SIGCLRKLQKLSLEGNPLVSPPMDV 194
            IG L +L++L +  NPL   P  +
Sbjct: 396 QIGRLHRLKELHVRNNPLKYFPASL 420



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 77/135 (57%), Gaps = 2/135 (1%)

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           E++ ++  L+  P  IG+    L  L+++ N++V LP+ +  L  L  L  + NCL+ LP
Sbjct: 197 EVDISYMNLKCCPQLIGYVGRQLTVLNLSNNRLVSLPEEIGLLGGLEQLFLQYNCLEKLP 256

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           + + N  +L+ L+   N  +L++LP ++G L  LV L+V+ N +T L  SIG L  L++L
Sbjct: 257 KCIGNFSHLQELDCKNN--HLQSLPSTLGRLSILVILNVTNNLLTELTGSIGQLTHLEEL 314

Query: 181 SLEGNPLVSPPMDVV 195
               N L S P ++ 
Sbjct: 315 CAHSNQLTSLPDEMC 329



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 87/178 (48%), Gaps = 11/178 (6%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P +L  RL  +V+L+V +N L  L  SIG L+ L+ L    N L SLP  + N  +L  
Sbjct: 278 LPSTL-GRLSILVILNVTNNLLTELTGSIGQLTHLEELCAHSNQLTSLPDEMCNLVNLTA 336

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N LR LP   G  L+ L  L ++  ++  LP SL+  TSL  +    N L SLP+
Sbjct: 337 LYVGENHLRSLPSAFG-RLVRLTELDLSSCELTHLPASLSRCTSLNKVWLSNNRLTSLPD 395

Query: 122 DLENLINLEVLNISQN--------FQYLETLPYSIGLLMSLVELDVSY-NKITTLPDS 170
            +  L  L+ L++  N          YL+   +S+     L E D    +K+T  P++
Sbjct: 396 QIGRLHRLKELHVRNNPLKYFPASLSYLQLYTFSVNQDKLLDEWDQEVTSKLTFRPET 453


>gi|170029739|ref|XP_001842749.1| leucine-rich repeat-containing protein 40 [Culex quinquefasciatus]
 gi|167864068|gb|EDS27451.1| leucine-rich repeat-containing protein 40 [Culex quinquefasciatus]
          Length = 612

 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 112/213 (52%), Gaps = 10/213 (4%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L+ + VLD+  N L  LP  IG L +L+ L ++ N L  LP  I N R+L +L+   N L
Sbjct: 185 LIMLEVLDISFNSLNSLPGGIGFLVRLQQLTLNNNRLTELPNDIVNLRNLHKLDLAKNDL 244

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDL-ENLIN 128
           + LP  +G EL  L+ L +  N +  LP   T   +L+ L    N +KS+P D  ENL  
Sbjct: 245 KLLPPVMG-ELRKLECLYVQHNDVGELP-DFTGCDALKELHISNNFIKSIPADFCENLPQ 302

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L++L++  N   +E LP  I +L SL  LD+S N I++LP  +  L  L  L ++GNP+ 
Sbjct: 303 LKILDLRDN--KIEKLPDEISMLASLTRLDLSNNSISSLPSCLSTLAHLVSLQVDGNPIR 360

Query: 189 SPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKS 221
           S   D+++ G   +   L      D   P K S
Sbjct: 361 SIRRDIIQCGTQRILKTLK-----DRDGPGKSS 388



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 97/179 (54%), Gaps = 3/179 (1%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  LD+ SN L  +  ++  L  L VL++  N L +LP+ I     L +L+   NKL +L
Sbjct: 96  LTTLDLSSNTLTSISENVKNLGDLTVLNLQDNALTALPEGIGCLTKLTKLSLGRNKLSEL 155

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P++  F L  LK+L+++ N    +  +++ L  L VLD   N L SLP  +  L+ L+ L
Sbjct: 156 PESF-FNLRELKSLNLSHNDFAEIHANVSDLIMLEVLDISFNSLNSLPGGIGFLVRLQQL 214

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            ++ N   L  LP  I  L +L +LD++ N +  LP  +G LRKL+ L ++ N +   P
Sbjct: 215 TLNNN--RLTELPNDIVNLRNLHKLDLAKNDLKLLPPVMGELRKLECLYVQHNDVGELP 271



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 93/175 (53%), Gaps = 5/175 (2%)

Query: 39  LDVSGNLLESLPKTIENCRS-LEELNANFNKLRQLPDTIG-FELINLKTLSINCNKIVIL 96
           +D+S N L  +P  + +  S + ELN +FN L+ +P     FE I+   L+++ N++  L
Sbjct: 438 IDISKNKLMEIPAGLTHLASIMTELNVSFNALKTIPMFFSQFERISY--LNVSNNQLTDL 495

Query: 97  PQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN-FQYLETLPYSIGLLMSLV 155
           P+ +  L +LR L+   N LK +P  +  L  LE+L    N  + L+   + +G L  L 
Sbjct: 496 PEVVGLLVTLRELNVANNQLKQIPPCVYELKGLEILLARGNKIEELDASEHGLGALPRLA 555

Query: 156 ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKM 210
            LDV+ N I  +P  +G L+ +  L + GN    P   ++E+G  ++  YL +++
Sbjct: 556 TLDVANNNIKQVPPILGMLKNITTLEIIGNAFRQPRHQILEKGTESIMAYLRDRI 610



 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 42/235 (17%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP      L  + +LD+  N+++ LP+ I  L+ L  LD+S N + SLP  +     L  
Sbjct: 292 IPADFCENLPQLKILDLRDNKIEKLPDEISMLASLTRLDLSNNSISSLPSCLSTLAHLVS 351

Query: 62  LNANFNKLRQ----------------LPDTIG--------------------FELINLKT 85
           L  + N +R                 L D  G                    +++   ++
Sbjct: 352 LQVDGNPIRSIRRDIIQCGTQRILKTLKDRDGPGKSSEKVRVPFEESTFPDVYQMKKGRS 411

Query: 86  LSINCNKIVILPQSL---THLTSLRVLDARLNCLKSLPEDLENLINLEV-LNISQNFQYL 141
           + ++   ++ +P+ +       S+  +D   N L  +P  L +L ++   LN+S  F  L
Sbjct: 412 MIVSNKNLIDIPEQVFLDAMEASVYNIDISKNKLMEIPAGLTHLASIMTELNVS--FNAL 469

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           +T+P        +  L+VS N++T LP+ +G L  L++L++  N L   P  V E
Sbjct: 470 KTIPMFFSQFERISYLNVSNNQLTDLPEVVGLLVTLRELNVANNQLKQIPPCVYE 524


>gi|32812252|gb|AAP88017.1|AF240677_1 CRIB1 [Homo sapiens]
 gi|20521832|dbj|BAA09768.3| KIAA0147 protein [Homo sapiens]
 gi|168274406|dbj|BAG09623.1| scribble protein [synthetic construct]
          Length = 1630

 Score = 97.4 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 108/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 116

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 117 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 174

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 175 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 188 VSPPMD 193
              P +
Sbjct: 233 EELPAE 238



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 7/192 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   L
Sbjct: 27  VPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP   T L SL  L      L++L
Sbjct: 85  VELDVSRNDIPEIPESIKF-CKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L++
Sbjct: 144 PGDVGNLANLVTLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRE 201

Query: 180 LSLEGNPLVSPP 191
           L L+ N L + P
Sbjct: 202 LWLDRNQLSALP 213



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 69/202 (34%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 188 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLT 246

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N LR+LPD IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 247 DLLLSQNLLRRLPDGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALP 305

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 306 RSLGKLTKLTNLNVDRN--HLEALPPEIGGCVALSVLSLRDNRLAVLPPELAHTTELHVL 363

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 364 DVAGNRLQSLPFALTHLNLKAL 385



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 139 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 198 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 236



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 104/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 120 LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 179 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPA 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L+ L  L +SQN   L  LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 238 ELGGLVLLTDLLLSQNL--LRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 295

Query: 182 LEGNPLVSPP 191
           L  N L++ P
Sbjct: 296 LTENLLMALP 305



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 150 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 209

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LP+ +  L  L
Sbjct: 210 SALPPELG-NLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL 268

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
            +L + QN   L  +  +IG   +L EL ++ N +  LP S+G L KL  L+++ N L +
Sbjct: 269 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEA 326

Query: 190 PPMDV 194
            P ++
Sbjct: 327 LPPEI 331



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP+++     L  
Sbjct: 258 LPDGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTN 316

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++ +LP  L H T L VLD   N L+SLP 
Sbjct: 317 LNVDRNHLEALPPEIG-GCVALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSLPF 375

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 376 ALTHL-NLKALWLAEN 390



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           LKC+P    C   ++ +D     L+++P+ I    RSLEEL  + N+LR+LP    F L+
Sbjct: 2   LKCIP-LWRCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLL 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I                       + LP ++ N + L  L++S+N   +
Sbjct: 60  NLRKLGLSDNEI-----------------------QRLPPEVANFMQLVELDVSRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P SI    +L   D S N ++ LPD    LR L  L+L    L + P DV
Sbjct: 95  PEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDV 147


>gi|355390315|ref|NP_056171.3| protein scribble homolog isoform b [Homo sapiens]
          Length = 1630

 Score = 97.4 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 108/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 116

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 117 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 174

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 175 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 188 VSPPMD 193
              P +
Sbjct: 233 EELPAE 238



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 7/192 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   L
Sbjct: 27  VPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP   T L SL  L      L++L
Sbjct: 85  VELDVSRNDIPEIPESIKF-CKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L++
Sbjct: 144 PGDVGNLANLVTLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRE 201

Query: 180 LSLEGNPLVSPP 191
           L L+ N L + P
Sbjct: 202 LWLDRNQLSALP 213



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 69/202 (34%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 188 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLT 246

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N LR+LPD IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 247 DLLLSQNLLRRLPDGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALP 305

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 306 RSLGKLTKLTNLNVDRN--HLEALPPEIGGCVALSVLSLRDNRLAVLPPELAHTTELHVL 363

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 364 DVAGNRLQSLPFALTHLNLKAL 385



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 139 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 198 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 236



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 104/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 120 LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 179 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPA 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L+ L  L +SQN   L  LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 238 ELGGLVLLTDLLLSQNL--LRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 295

Query: 182 LEGNPLVSPP 191
           L  N L++ P
Sbjct: 296 LTENLLMALP 305



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 150 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 209

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LP+ +  L  L
Sbjct: 210 SALPPELG-NLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL 268

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
            +L + QN   L  +  +IG   +L EL ++ N +  LP S+G L KL  L+++ N L +
Sbjct: 269 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEA 326

Query: 190 PPMDV 194
            P ++
Sbjct: 327 LPPEI 331



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP+++     L  
Sbjct: 258 LPDGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTN 316

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++ +LP  L H T L VLD   N L+SLP 
Sbjct: 317 LNVDRNHLEALPPEIG-GCVALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSLPF 375

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 376 ALTHL-NLKALWLAEN 390



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           LKC+P    C   ++ +D     L+++P+ I    RSLEEL  + N+LR+LP    F L+
Sbjct: 2   LKCIP-LWRCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLL 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I                       + LP ++ N + L  L++S+N   +
Sbjct: 60  NLRKLGLSDNEI-----------------------QRLPPEVANFMQLVELDVSRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P SI    +L   D S N ++ LPD    LR L  L+L    L + P DV
Sbjct: 95  PEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDV 147


>gi|261260101|sp|Q14160.4|SCRIB_HUMAN RecName: Full=Protein scribble homolog; Short=Scribble;
           Short=hScrib; AltName: Full=Protein LAP4
          Length = 1630

 Score = 97.4 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 108/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 116

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 117 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 174

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 175 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 188 VSPPMD 193
              P +
Sbjct: 233 EELPAE 238



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 7/192 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   L
Sbjct: 27  VPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP   T L SL  L      L++L
Sbjct: 85  VELDVSRNDIPEIPESIKF-CKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L++
Sbjct: 144 PGDVGNLANLVTLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRE 201

Query: 180 LSLEGNPLVSPP 191
           L L+ N L + P
Sbjct: 202 LWLDRNQLSALP 213



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 69/202 (34%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 188 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLT 246

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N LR+LPD IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 247 DLLLSQNLLRRLPDGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALP 305

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 306 RSLGKLTKLTNLNVDRN--HLEALPPEIGGCVALSVLSLRDNRLAVLPPELAHTTELHVL 363

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 364 DVAGNRLQSLPFALTHLNLKAL 385



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 139 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 198 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 236



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 104/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 120 LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 179 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPA 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L+ L  L +SQN   L  LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 238 ELGGLVLLTDLLLSQNL--LRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 295

Query: 182 LEGNPLVSPP 191
           L  N L++ P
Sbjct: 296 LTENLLMALP 305



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 150 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 209

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LP+ +  L  L
Sbjct: 210 SALPPELG-NLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL 268

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
            +L + QN   L  +  +IG   +L EL ++ N +  LP S+G L KL  L+++ N L +
Sbjct: 269 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEA 326

Query: 190 PPMDV 194
            P ++
Sbjct: 327 LPPEI 331



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP+++     L  
Sbjct: 258 LPDGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTN 316

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++ +LP  L H T L VLD   N L+SLP 
Sbjct: 317 LNVDRNHLEALPPEIG-GCVALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSLPF 375

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 376 ALTHL-NLKALWLAEN 390



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           LKC+P    C   ++ +D     L+++P+ I    RSLEEL  + N+LR+LP    F L+
Sbjct: 2   LKCIP-LWRCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLL 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I                       + LP ++ N + L  L++S+N   +
Sbjct: 60  NLRKLGLSDNEI-----------------------QRLPPEVANFMQLVELDVSRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P SI    +L   D S N ++ LPD    LR L  L+L    L + P DV
Sbjct: 95  PEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDV 147


>gi|119602603|gb|EAW82197.1| scribbled homolog (Drosophila), isoform CRA_b [Homo sapiens]
          Length = 1656

 Score = 97.4 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 108/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 116

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 117 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 174

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 175 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 188 VSPPMD 193
              P +
Sbjct: 233 EELPAE 238



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 7/192 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   L
Sbjct: 27  VPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP   T L SL  L      L++L
Sbjct: 85  VELDVSRNDIPEIPESIKF-CKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L++
Sbjct: 144 PGDVGNLANLVTLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRE 201

Query: 180 LSLEGNPLVSPP 191
           L L+ N L + P
Sbjct: 202 LWLDRNQLSALP 213



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 69/202 (34%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 188 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLT 246

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N LR+LPD IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 247 DLLLSQNLLRRLPDGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALP 305

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 306 RSLGKLTKLTNLNVDRN--HLEALPPEIGGCVALSVLSLRDNRLAVLPPELAHTTELHVL 363

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 364 DVAGNRLQSLPFALTHLNLKAL 385



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 139 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 198 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 236



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 104/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 120 LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 179 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPA 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L+ L  L +SQN   L  LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 238 ELGGLVLLTDLLLSQNL--LRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 295

Query: 182 LEGNPLVSPP 191
           L  N L++ P
Sbjct: 296 LTENLLMALP 305



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 150 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 209

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LP+ +  L  L
Sbjct: 210 SALPPELG-NLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL 268

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
            +L + QN   L  +  +IG   +L EL ++ N +  LP S+G L KL  L+++ N L +
Sbjct: 269 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEA 326

Query: 190 PPMDV 194
            P ++
Sbjct: 327 LPPEI 331



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP+++     L  
Sbjct: 258 LPDGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTN 316

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++ +LP  L H T L VLD   N L+SLP 
Sbjct: 317 LNVDRNHLEALPPEIG-GCVALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSLPF 375

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 376 ALTHL-NLKALWLAEN 390



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           LKC+P    C   ++ +D     L+++P+ I    RSLEEL  + N+LR+LP    F L+
Sbjct: 2   LKCIP-LWRCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLL 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I                       + LP ++ N + L  L++S+N   +
Sbjct: 60  NLRKLGLSDNEI-----------------------QRLPPEVANFMQLVELDVSRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P SI    +L   D S N ++ LPD    LR L  L+L    L + P DV
Sbjct: 95  PEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDV 147


>gi|397497380|ref|XP_003819489.1| PREDICTED: protein scribble homolog isoform 1 [Pan paniscus]
          Length = 1637

 Score = 97.4 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 108/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 116

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 117 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 174

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 175 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 188 VSPPMD 193
              P +
Sbjct: 233 EELPAE 238



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 7/192 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   L
Sbjct: 27  VPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP   T L SL  L      L++L
Sbjct: 85  VELDVSRNDIPEIPESIKF-CKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L++
Sbjct: 144 PGDVGNLANLVTLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRE 201

Query: 180 LSLEGNPLVSPP 191
           L L+ N L + P
Sbjct: 202 LWLDRNQLSALP 213



 Score = 86.7 bits (213), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 69/202 (34%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 188 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLT 246

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N LR+LPD IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 247 DLLLSQNLLRRLPDGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALP 305

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 306 RSLGKLTKLTNLNVDRN--HLEALPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVL 363

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 364 DVAGNRLQSLPFALTHLNLKAL 385



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 139 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 198 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 236



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 104/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 120 LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 179 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPA 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L+ L  L +SQN   L  LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 238 ELGGLVLLTDLLLSQNL--LRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 295

Query: 182 LEGNPLVSPP 191
           L  N L++ P
Sbjct: 296 LTENLLMALP 305



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 150 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 209

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LP+ +  L  L
Sbjct: 210 SALPPELG-NLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL 268

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
            +L + QN   L  +  +IG   +L EL ++ N +  LP S+G L KL  L+++ N L +
Sbjct: 269 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEA 326

Query: 190 PPMDV 194
            P ++
Sbjct: 327 LPPEI 331



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/136 (34%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP+++     L  
Sbjct: 258 LPDGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTN 316

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++ +LP  L H   L VLD   N L+SLP 
Sbjct: 317 LNVDRNHLEALPPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPF 375

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 376 ALTHL-NLKALWLAEN 390



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           LKC+P    C   ++ +D     L+++P+ I    RSLEEL  + N+LR+LP    F L+
Sbjct: 2   LKCIP-LWRCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLL 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I                       + LP ++ N + L  L++S+N   +
Sbjct: 60  NLRKLGLSDNEI-----------------------QRLPPEVANFMQLVELDVSRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P SI    +L   D S N ++ LPD    LR L  L+L    L + P DV
Sbjct: 95  PEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDV 147


>gi|18032008|gb|AAL38976.1| scribble [Homo sapiens]
          Length = 1630

 Score = 97.4 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 108/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 116

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 117 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 174

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 175 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 188 VSPPMD 193
              P +
Sbjct: 233 EELPAE 238



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 7/192 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   L
Sbjct: 27  VPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP   T L SL  L      L++L
Sbjct: 85  VELDVSRNDIPEIPESIKF-CKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L++
Sbjct: 144 PGDVGNLANLVTLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRE 201

Query: 180 LSLEGNPLVSPP 191
           L L+ N L + P
Sbjct: 202 LWLDRNQLSALP 213



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 69/202 (34%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 188 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLT 246

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N LR+LPD IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 247 DLLLSQNLLRRLPDGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALP 305

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 306 RSLGKLTKLTNLNVDRN--HLEALPPEIGGCVALSVLSLRDNRLAVLPPELAHTTELHVL 363

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 364 DVAGNRLQSLPFALTHLNLKAL 385



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 139 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 198 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 236



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 104/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 120 LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 179 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPA 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L+ L  L +SQN   L  LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 238 ELGGLVLLTDLLLSQNL--LRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 295

Query: 182 LEGNPLVSPP 191
           L  N L++ P
Sbjct: 296 LTENLLMALP 305



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 150 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 209

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LP+ +  L  L
Sbjct: 210 SALPPELG-NLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL 268

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
            +L + QN   L  +  +IG   +L EL ++ N +  LP S+G L KL  L+++ N L +
Sbjct: 269 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEA 326

Query: 190 PPMDV 194
            P ++
Sbjct: 327 LPPEI 331



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP+++     L  
Sbjct: 258 LPDGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTN 316

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++ +LP  L H T L VLD   N L+SLP 
Sbjct: 317 LNVDRNHLEALPPEIG-GCVALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSLPF 375

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 376 ALTHL-NLKALWLAEN 390



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           LKC+P    C   ++ +D     L+++P+ I    RSLEEL  + N+LR+LP    F L+
Sbjct: 2   LKCIP-LWRCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLL 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I                       + LP ++ N + L  L++S+N   +
Sbjct: 60  NLRKLGLSDNEI-----------------------QRLPPEVANFMQLVELDVSRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P SI    +L   D S N ++ LPD    LR L  L+L    L + P DV
Sbjct: 95  PEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDV 147


>gi|281203246|gb|EFA77446.1| leucine-rich repeat-containing protein [Polysphondylium pallidum
            PN500]
          Length = 2724

 Score = 97.4 bits (241), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 105/173 (60%), Gaps = 3/173 (1%)

Query: 36   LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVI 95
            L  LD+SG  +  LP  I +  SL+   AN N+L  LP ++   L  L+ LS++ NK  +
Sbjct: 1134 LTALDLSGTHMSHLPDDIGSLTSLKVFAANENQLTALPVSMT-NLKQLEKLSLDSNKFSL 1192

Query: 96   LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLV 155
            +P  +  L SLRVL    N +  LP D+ +L+NL  LN+ QN   L+ LP SIG L +L+
Sbjct: 1193 MPSEICQLISLRVLSMGENQMSMLPSDISSLVNLVELNLKQN--KLDILPASIGQLSNLL 1250

Query: 156  ELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSE 208
             L++S N++T+L  ++G L  L +L L+ NPL +PP +++ QGL+ +  YL +
Sbjct: 1251 VLNLSSNQLTSLRPTMGLLTSLTELRLDANPLKTPPPEILSQGLTPILEYLRD 1303


>gi|440793969|gb|ELR15140.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 708

 Score = 97.4 bits (241), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 67/174 (38%), Positives = 101/174 (58%), Gaps = 4/174 (2%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           VL +  NQ+  L  S+G L++L+ L ++GN L +LP TI    +LE+L+   N+L  LP 
Sbjct: 287 VLHMEGNQMTSLSASVGRLTRLRELHLNGNQLVALPDTIAKLGALEKLSVANNRLTTLPP 346

Query: 75  TIGFELINLKTLSINCNKIVI-LPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLN 133
            IG  L  L+ L++N N +V  LP  +   ++L V+D     L  LP+D   L  L  LN
Sbjct: 347 QIGC-LSRLEELNLNGNPLVQGLPPEVGACSALEVMDLSACQLTVLPDDFTLLTRLMELN 405

Query: 134 ISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           ++ N   L  LP ++G +  LV LD+S N+++ LP S G L  LQ L ++GNP+
Sbjct: 406 LASN--RLAQLPQAVGRMTRLVRLDLSDNRLSDLPLSAGHLTGLQTLMVQGNPI 457



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 94/173 (54%), Gaps = 5/173 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+LK  P  +  L  L+VL + GN + SL  ++     L EL+ N N+L  LPDTI  +L
Sbjct: 271 NKLKSFPQ-LTPLVCLEVLHMEGNQMTSLSASVGRLTRLRELHLNGNQLVALPDTIA-KL 328

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCL-KSLPEDLENLINLEVLNISQNFQ 139
             L+ LS+  N++  LP  +  L+ L  L+   N L + LP ++     LEV+++S    
Sbjct: 329 GALEKLSVANNRLTTLPPQIGCLSRLEELNLNGNPLVQGLPPEVGACSALEVMDLSAC-- 386

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
            L  LP    LL  L+EL+++ N++  LP ++G + +L +L L  N L   P+
Sbjct: 387 QLTVLPDDFTLLTRLMELNLASNRLAQLPQAVGRMTRLVRLDLSDNRLSDLPL 439



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 78/137 (56%), Gaps = 3/137 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGN-LLESLPKTIENCRSLE 60
           +P+++ A+L  +  L V +N+L  LP  IGCLS+L+ L+++GN L++ LP  +  C +LE
Sbjct: 321 LPDTI-AKLGALEKLSVANNRLTTLPPQIGCLSRLEELNLNGNPLVQGLPPEVGACSALE 379

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            ++ +  +L  LPD     L  L  L++  N++  LPQ++  +T L  LD   N L  LP
Sbjct: 380 VMDLSACQLTVLPDDFTL-LTRLMELNLASNRLAQLPQAVGRMTRLVRLDLSDNRLSDLP 438

Query: 121 EDLENLINLEVLNISQN 137
               +L  L+ L +  N
Sbjct: 439 LSAGHLTGLQTLMVQGN 455



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 95/183 (51%), Gaps = 14/183 (7%)

Query: 23  LKCLPNSIGCLSKLKV-----------LDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           L  +P+++G +++L+V           L++  N L+S P+ +     LE L+   N++  
Sbjct: 239 LTYVPHTVGAVTQLQVPLLLLLRRWRGLNLGFNKLKSFPQ-LTPLVCLEVLHMEGNQMTS 297

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           L  ++G  L  L+ L +N N++V LP ++  L +L  L    N L +LP  +  L  LE 
Sbjct: 298 LSASVG-RLTRLRELHLNGNQLVALPDTIAKLGALEKLSVANNRLTTLPPQIGCLSRLEE 356

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LN++ N   ++ LP  +G   +L  +D+S  ++T LPD    L +L +L+L  N L   P
Sbjct: 357 LNLNGN-PLVQGLPPEVGACSALEVMDLSACQLTVLPDDFTLLTRLMELNLASNRLAQLP 415

Query: 192 MDV 194
             V
Sbjct: 416 QAV 418


>gi|260841659|ref|XP_002614028.1| hypothetical protein BRAFLDRAFT_67388 [Branchiostoma floridae]
 gi|229299418|gb|EEN70037.1| hypothetical protein BRAFLDRAFT_67388 [Branchiostoma floridae]
          Length = 1609

 Score = 97.4 bits (241), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 114/195 (58%), Gaps = 5/195 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           ++ N+  LD+ + QL  LP  +G L++L+ LD+S N L++LP+ + +  +++ L+ +  +
Sbjct: 362 QVTNIKRLDLSNCQLHTLPPEVGTLTQLEWLDLSFNTLQTLPRELGHVTNIKRLDLSHCQ 421

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  +G +L +LK L +  N +  LP  L  + S++ LD     L +LP ++  L  
Sbjct: 422 LHTLPPQVG-KLTHLKWLKVKNNPLQTLPGELGQVASIKHLDLSNCWLHTLPPEVGTLTQ 480

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           LE L ++ N   L+TLP  +  + ++  LD+S   + TLP  +G L +L+ LSL+GNPL 
Sbjct: 481 LERLKVANN--PLQTLPGELWKVTNIKRLDLSSCWLDTLPPEVGTLTQLEWLSLQGNPLQ 538

Query: 189 SPPMDVVEQGLSAVK 203
             P  + +  L+A+K
Sbjct: 539 MLPKQIGQ--LTAIK 551



 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 120/230 (52%), Gaps = 26/230 (11%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+P+ +  +L  +  L++   QL  LP  +G L +L+ L + GN L+ LPK +EN   ++
Sbjct: 539 MLPKQI-GQLTAIKHLNLSFCQLHTLPPEMGTLKQLEWLSLQGNPLQMLPKQVENLTHIK 597

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCN-KIVILPQSLTHLTSLRVLDARLNCLKSL 119
            +N +  +L+ LP   G +L  L+ L ++CN ++  LP     LT+++ LD     L++L
Sbjct: 598 WMNLSHCRLQMLPPEFG-KLTQLERLYLSCNGELQTLPTR--QLTNIKHLDLSNCSLQTL 654

Query: 120 PEDLENLINLEVLNISQN--------------FQYLE-------TLPYSIGLLMSLVELD 158
           P ++  L ++E L +S N               ++L+        LP  +G +  L +LD
Sbjct: 655 PPEVGELKHVEYLRLSSNPLQKLPPEVRHLTNIKHLDMSNCRLNELPIEVGTMTQLRQLD 714

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSE 208
           + YN++  LP  I     L  L + GNPL+ PP +V  QG+ AV+ Y  E
Sbjct: 715 LRYNQLQMLPVEITQHINLYHLDVRGNPLIRPPAEVCSQGMVAVRQYFEE 764



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 104/186 (55%), Gaps = 4/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           ++ N+  LD+ S  L  LP  +G L++L+ L + GN L+ LPK I    +++ LN +F +
Sbjct: 500 KVTNIKRLDLSSCWLDTLPPEVGTLTQLEWLSLQGNPLQMLPKQIGQLTAIKHLNLSFCQ 559

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP  +G  L  L+ LS+  N + +LP+ + +LT ++ ++     L+ LP +   L  
Sbjct: 560 LHTLPPEMG-TLKQLEWLSLQGNPLQMLPKQVENLTHIKWMNLSHCRLQMLPPEFGKLTQ 618

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           LE L +S N + L+TLP     L ++  LD+S   + TLP  +G L+ ++ L L  NPL 
Sbjct: 619 LERLYLSCNGE-LQTLPTR--QLTNIKHLDLSNCSLQTLPPEVGELKHVEYLRLSSNPLQ 675

Query: 189 SPPMDV 194
             P +V
Sbjct: 676 KLPPEV 681



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 102/194 (52%), Gaps = 23/194 (11%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELN-ANFNKLRQLPDTIGF 78
           SN L+ L   +G LS++K LD+S   L +LP  +     LE L  AN   L+ LP  + +
Sbjct: 303 SNPLQTLSVKVGQLSRIKRLDLSNCHLRTLPPEVGTLTQLERLKVANNRALQTLPGEL-W 361

Query: 79  ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQ-- 136
           ++ N+K L ++  ++  LP  +  LT L  LD   N L++LP +L ++ N++ L++S   
Sbjct: 362 QVTNIKRLDLSNCQLHTLPPEVGTLTQLEWLDLSFNTLQTLPRELGHVTNIKRLDLSHCQ 421

Query: 137 ------------NFQY-------LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
                       + ++       L+TLP  +G + S+  LD+S   + TLP  +G L +L
Sbjct: 422 LHTLPPQVGKLTHLKWLKVKNNPLQTLPGELGQVASIKHLDLSNCWLHTLPPEVGTLTQL 481

Query: 178 QKLSLEGNPLVSPP 191
           ++L +  NPL + P
Sbjct: 482 ERLKVANNPLQTLP 495



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 96/188 (51%), Gaps = 28/188 (14%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++  L V +N L+ LP  +G ++ +K LD+S   L +LP  +     LE L    N
Sbjct: 430 GKLTHLKWLKVKNNPLQTLPGELGQVASIKHLDLSNCWLHTLPPEVGTLTQLERLKVANN 489

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNC-LKSLPEDLENL 126
            L+ LP  + +++ N+K L ++                        +C L +LP ++  L
Sbjct: 490 PLQTLPGEL-WKVTNIKRLDLS------------------------SCWLDTLPPEVGTL 524

Query: 127 INLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
             LE L++  N   L+ LP  IG L ++  L++S+ ++ TLP  +G L++L+ LSL+GNP
Sbjct: 525 TQLEWLSLQGN--PLQMLPKQIGQLTAIKHLNLSFCQLHTLPPEMGTLKQLEWLSLQGNP 582

Query: 187 LVSPPMDV 194
           L   P  V
Sbjct: 583 LQMLPKQV 590



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 107/194 (55%), Gaps = 5/194 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ L   L N+ VL ++   +  +P ++  LS+L+ LD+SGN    L   +    +L+ 
Sbjct: 217 LPDELRT-LKNIRVLRLNRAGMTTVPPAVLELSQLEKLDLSGNKQIKLSDQLLGLTNLKV 275

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNC-LKSLP 120
           L  +  ++  +P+ + ++L +L+ L +  N +  L   +  L+ ++ LD   NC L++LP
Sbjct: 276 LRLSRTEMASVPEVV-WKLTHLEELHLLSNPLQTLSVKVGQLSRIKRLDLS-NCHLRTLP 333

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
            ++  L  LE L ++ N + L+TLP  +  + ++  LD+S  ++ TLP  +G L +L+ L
Sbjct: 334 PEVGTLTQLERLKVANN-RALQTLPGELWQVTNIKRLDLSNCQLHTLPPEVGTLTQLEWL 392

Query: 181 SLEGNPLVSPPMDV 194
            L  N L + P ++
Sbjct: 393 DLSFNTLQTLPREL 406



 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 93/224 (41%), Gaps = 47/224 (20%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGN----------------------- 44
            +L N+ VL + +  L  LP  +  LS L+VLD+S N                       
Sbjct: 128 VKLTNLKVLCLENCNLDKLPPVVLKLSHLQVLDISKNKAISLPKMILKKLKKLKVLKLRD 187

Query: 45  --LLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTH 102
             L+    +  +    LEEL+ + N    LPD +   L N++ L +N   +  +P ++  
Sbjct: 188 CDLVTIGRQIFQQESQLEELDLSGNMQIDLPDELR-TLKNIRVLRLNRAGMTTVPPAVLE 246

Query: 103 LTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY---------------------L 141
           L+ L  LD   N    L + L  L NL+VL +S+                         L
Sbjct: 247 LSQLEKLDLSGNKQIKLSDQLLGLTNLKVLRLSRTEMASVPEVVWKLTHLEELHLLSNPL 306

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           +TL   +G L  +  LD+S   + TLP  +G L +L++L +  N
Sbjct: 307 QTLSVKVGQLSRIKRLDLSNCHLRTLPPEVGTLTQLERLKVANN 350



 Score = 38.5 bits (88), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 73/167 (43%), Gaps = 3/167 (1%)

Query: 26  LPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK-LRQLPDTIGFELINLK 84
           L N +  L+ LKVL +    L+ LP  +     L+ L+ + NK +      +        
Sbjct: 123 LSNKLVKLTNLKVLCLENCNLDKLPPVVLKLSHLQVLDISKNKAISLPKMILKKLKKLKV 182

Query: 85  TLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
               +C+ + I  Q     + L  LD   N    LP++L  L N+ VL +  N   + T+
Sbjct: 183 LKLRDCDLVTIGRQIFQQESQLEELDLSGNMQIDLPDELRTLKNIRVLRL--NRAGMTTV 240

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           P ++  L  L +LD+S NK   L D +  L  L+ L L    + S P
Sbjct: 241 PPAVLELSQLEKLDLSGNKQIKLSDQLLGLTNLKVLRLSRTEMASVP 287


>gi|254410122|ref|ZP_05023902.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
           PCC 7420]
 gi|196183158|gb|EDX78142.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
           PCC 7420]
          Length = 297

 Score = 97.4 bits (241), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 67/173 (38%), Positives = 108/173 (62%), Gaps = 4/173 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPES+ ++L+N+  L++  NQL  +P SI  L  L  L++S N L  +P++I    +L E
Sbjct: 127 IPESI-SQLVNLTELNLSGNQLTQVPESITQLVNLTELNLSDNQLTQVPESITQLVNLTE 185

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N+L Q+P++I  +L+NL  L++  N++  +P+S+T L +L  L    N L  +PE
Sbjct: 186 LNLFGNQLTQVPESI-TQLVNLTELNLFGNQLTQVPESITQLVNLTQLYLFGNQLTQVPE 244

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCL 174
            +  L+NL  L++S N   L  +P SI  L++L ELD+S N++T +P+SI  L
Sbjct: 245 SISQLVNLTQLDLSHN--QLTQVPESISQLVNLTELDLSGNQLTQVPESISQL 295



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 102/169 (60%), Gaps = 3/169 (1%)

Query: 26  LPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKT 85
           +P SI  L  L  L++SGN L  +P++I    +L ELN + N+L Q+P++I  +L+NL  
Sbjct: 127 IPESISQLVNLTELNLSGNQLTQVPESITQLVNLTELNLSDNQLTQVPESI-TQLVNLTE 185

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           L++  N++  +P+S+T L +L  L+   N L  +PE +  L+NL  L +  N   L  +P
Sbjct: 186 LNLFGNQLTQVPESITQLVNLTELNLFGNQLTQVPESITQLVNLTQLYLFGN--QLTQVP 243

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            SI  L++L +LD+S+N++T +P+SI  L  L +L L GN L   P  +
Sbjct: 244 ESISQLVNLTQLDLSHNQLTQVPESISQLVNLTELDLSGNQLTQVPESI 292



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/177 (35%), Positives = 102/177 (57%), Gaps = 3/177 (1%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           +  N+L+ LP  +  L  L+ LD+SGN  E +P  I   R LE+L      + ++P++I 
Sbjct: 73  IVGNRLQSLPPELSNLVNLRKLDISGNPWEKIPDVITQLRHLEQLTLIRTDIDKIPESIS 132

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
            +L+NL  L+++ N++  +P+S+T L +L  L+   N L  +PE +  L+NL  LN+  N
Sbjct: 133 -QLVNLTELNLSGNQLTQVPESITQLVNLTELNLSDNQLTQVPESITQLVNLTELNLFGN 191

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
              L  +P SI  L++L EL++  N++T +P+SI  L  L +L L GN L   P  +
Sbjct: 192 --QLTQVPESITQLVNLTELNLFGNQLTQVPESITQLVNLTQLYLFGNQLTQVPESI 246



 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 78/127 (61%), Gaps = 2/127 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES+T +L+N+  L++  NQL  +P SI  L  L  L++ GN L  +P++I    +L +
Sbjct: 173 VPESIT-QLVNLTELNLFGNQLTQVPESITQLVNLTELNLFGNQLTQVPESITQLVNLTQ 231

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+L Q+P++I  +L+NL  L ++ N++  +P+S++ L +L  LD   N L  +PE
Sbjct: 232 LYLFGNQLTQVPESIS-QLVNLTQLDLSHNQLTQVPESISQLVNLTELDLSGNQLTQVPE 290

Query: 122 DLENLIN 128
            +  L+N
Sbjct: 291 SISQLVN 297



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 3/130 (2%)

Query: 67  NKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENL 126
           N+L+ LP  +   L+NL+ L I+ N    +P  +T L  L  L      +  +PE +  L
Sbjct: 76  NRLQSLPPELS-NLVNLRKLDISGNPWEKIPDVITQLRHLEQLTLIRTDIDKIPESISQL 134

Query: 127 INLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           +NL  LN+S N   L  +P SI  L++L EL++S N++T +P+SI  L  L +L+L GN 
Sbjct: 135 VNLTELNLSGN--QLTQVPESITQLVNLTELNLSDNQLTQVPESITQLVNLTELNLFGNQ 192

Query: 187 LVSPPMDVVE 196
           L   P  + +
Sbjct: 193 LTQVPESITQ 202


>gi|440904131|gb|ELR54685.1| Leucine-rich repeat-containing protein 40 [Bos grunniens mutus]
          Length = 404

 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 80/208 (38%), Positives = 116/208 (55%), Gaps = 32/208 (15%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           + VLD+H NQL  LP++I  L  L+ L+VS N L+ LP+ I N R+L+ L    N+L  +
Sbjct: 61  LTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKGLYLQHNELTCI 120

Query: 73  PDTIGFE-LINLKTLSINC--NKIVIL-PQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           P+  GFE L NL+ L ++   N+I +L  + L HL S+ VLD R N LKS+P++      
Sbjct: 121 PE--GFEQLNNLEDLELHVGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVPDE------ 172

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
                              I LL SL  LD+S N I++LP S+G L  L+ L+LEGNPL 
Sbjct: 173 -------------------ITLLQSLERLDLSNNDISSLPCSLGRLH-LKFLALEGNPLR 212

Query: 189 SPPMDVVEQGLSAVKGYLSEKMNNDHKS 216
           +   +++ +G   V  YL  K+ +D  S
Sbjct: 213 TIRREIINKGTQEVLKYLRSKIKDDGPS 240



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 109/255 (42%), Gaps = 65/255 (25%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           ++VLD+  N+LK +P+ I  L  L+ LD+S N + SLP     C SL  L+  F  L   
Sbjct: 156 ILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLP-----C-SLGRLHLKFLALEGN 209

Query: 73  P-DTIGFELIN------LKTLS--------------------------INCNKIVIL--- 96
           P  TI  E+IN      LK L                           +N + I+ L   
Sbjct: 210 PLRTIRREIINKGTQEVLKYLRSKIKDDGPSQNDSVIETAMTLPSESRVNVHTIITLKML 269

Query: 97  --PQSLTHLTSLRVLDA-RLNCLKS-----------------LPEDLENLINLEVLNISQ 136
                 T L    V DA + N + S                 LPE L  +  LE + IS 
Sbjct: 270 DYSDKQTALIPDEVFDAVKSNIITSINFSKNQLCEIPKRFKILPEVLYRIPTLETILISN 329

Query: 137 NFQYLETL-PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
           N  ++ +L P  +  + +L+ LD+  N +  +P  +G    L+ L L+GNP   P   ++
Sbjct: 330 N--HVGSLDPQKMKTMENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAIL 387

Query: 196 EQGLSAVKGYLSEKM 210
            +G +A+  YL +++
Sbjct: 388 MKGTAAILEYLRDRI 402



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 56/105 (53%), Gaps = 2/105 (1%)

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
           +E  +L  L I+ NK+  L   L  L +L VLD   N L SLP  +  L NL+ LN+S N
Sbjct: 33  WEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHN 92

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
              L+ LP  I  L +L  L + +N++T +P+    L  L+ L L
Sbjct: 93  --KLKILPEEITNLRNLKGLYLQHNELTCIPEGFEQLNNLEDLEL 135


>gi|119602604|gb|EAW82198.1| scribbled homolog (Drosophila), isoform CRA_c [Homo sapiens]
          Length = 1631

 Score = 97.1 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 108/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 116

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 117 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 174

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 175 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 188 VSPPMD 193
              P +
Sbjct: 233 EELPAE 238



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 7/192 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   L
Sbjct: 27  VPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP   T L SL  L      L++L
Sbjct: 85  VELDVSRNDIPEIPESIKF-CKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L++
Sbjct: 144 PGDVGNLANLVTLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRE 201

Query: 180 LSLEGNPLVSPP 191
           L L+ N L + P
Sbjct: 202 LWLDRNQLSALP 213



 Score = 86.7 bits (213), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 69/202 (34%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 188 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLT 246

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N LR+LPD IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 247 DLLLSQNLLRRLPDGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALP 305

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 306 RSLGKLTKLTNLNVDRN--HLEALPPEIGGCVALSVLSLRDNRLAVLPPELAHTTELHVL 363

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 364 DVAGNRLQSLPFALTHLNLKAL 385



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 139 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 198 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 236



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 104/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 120 LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 179 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPA 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L+ L  L +SQN   L  LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 238 ELGGLVLLTDLLLSQNL--LRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 295

Query: 182 LEGNPLVSPP 191
           L  N L++ P
Sbjct: 296 LTENLLMALP 305



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 150 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 209

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LP+ +  L  L
Sbjct: 210 SALPPELG-NLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL 268

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
            +L + QN   L  +  +IG   +L EL ++ N +  LP S+G L KL  L+++ N L +
Sbjct: 269 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEA 326

Query: 190 PPMDV 194
            P ++
Sbjct: 327 LPPEI 331



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP+++     L  
Sbjct: 258 LPDGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTN 316

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++ +LP  L H T L VLD   N L+SLP 
Sbjct: 317 LNVDRNHLEALPPEIG-GCVALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSLPF 375

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 376 ALTHL-NLKALWLAEN 390



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           LKC+P    C   ++ +D     L+++P+ I    RSLEEL  + N+LR+LP    F L+
Sbjct: 2   LKCIP-LWRCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLL 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I                       + LP ++ N + L  L++S+N   +
Sbjct: 60  NLRKLGLSDNEI-----------------------QRLPPEVANFMQLVELDVSRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P SI    +L   D S N ++ LPD    LR L  L+L    L + P DV
Sbjct: 95  PEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDV 147


>gi|145356364|ref|XP_001422402.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144582644|gb|ABP00719.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 242

 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 99/190 (52%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP  L AR   +  L    N+L+ LP  +G L  L+ +   GNLL  +P+ I NC SL  
Sbjct: 40  IPGDLIARFEKLERLGCAGNRLRALPREVGGLKSLRGIWAHGNLLNRVPEEIGNCESLRN 99

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+LR+LP T+G  L NL+ LS   N++  LP  L  +  LR +D   N +++LPE
Sbjct: 100 LVLGGNRLRELPKTLG-NLKNLEELSAPGNQLTSLP-DLGSMPLLREIDLHGNAIEALPE 157

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           D+  L  LE L++  N   L+T+P S   L  L  L+++ N +  LP  I  +  L  L 
Sbjct: 158 DMSGLKALETLSLQGN--KLKTIPKSAATLRRLRALNLAENVVERLPSEISEMTMLTSLW 215

Query: 182 LEGNPLVSPP 191
           L  N L   P
Sbjct: 216 LYSNALKELP 225



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/177 (36%), Positives = 93/177 (52%), Gaps = 5/177 (2%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKT-IENCRSLEELNANFNKLRQLPD 74
           LD+    L+ +P     LS L  L VS NLL  +P   I     LE L    N+LR LP 
Sbjct: 7   LDLSGLGLREIPGEARELSDLIELQVSNNLLYEIPGDLIARFEKLERLGCAGNRLRALPR 66

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            +G  L +L+ +  + N +  +P+ + +  SLR L    N L+ LP+ L NL NLE L+ 
Sbjct: 67  EVGG-LKSLRGIWAHGNLLNRVPEEIGNCESLRNLVLGGNRLRELPKTLGNLKNLEELSA 125

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
             N   L +LP  +G +  L E+D+  N I  LP+ +  L+ L+ LSL+GN L + P
Sbjct: 126 PGN--QLTSLP-DLGSMPLLREIDLHGNAIEALPEDMSGLKALETLSLQGNKLKTIP 179



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 87/167 (52%), Gaps = 5/167 (2%)

Query: 37  KVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVIL 96
           K LD+SG  L  +P        L EL  + N L ++P  +      L+ L    N++  L
Sbjct: 5   KRLDLSGLGLREIPGEARELSDLIELQVSNNLLYEIPGDLIARFEKLERLGCAGNRLRAL 64

Query: 97  PQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVE 156
           P+ +  L SLR + A  N L  +PE++ N  +L  L +  N   L  LP ++G L +L E
Sbjct: 65  PREVGGLKSLRGIWAHGNLLNRVPEEIGNCESLRNLVLGGN--RLRELPKTLGNLKNLEE 122

Query: 157 LDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVK 203
           L    N++T+LPD +G +  L+++ L GN + + P D+   GL A++
Sbjct: 123 LSAPGNQLTSLPD-LGSMPLLREIDLHGNAIEALPEDM--SGLKALE 166



 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 75/136 (55%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P++L   L N+  L    NQL  LP+ +G +  L+ +D+ GN +E+LP+ +   ++LE 
Sbjct: 110 LPKTL-GNLKNLEELSAPGNQLTSLPD-LGSMPLLREIDLHGNAIEALPEDMSGLKALET 167

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   NKL+ +P +    L  L+ L++  N +  LP  ++ +T L  L    N LK LPE
Sbjct: 168 LSLQGNKLKTIPKSAAT-LRRLRALNLAENVVERLPSEISEMTMLTSLWLYSNALKELPE 226

Query: 122 DLENLINLEVLNISQN 137
            ++ + +L  L I  N
Sbjct: 227 TMKKMPSLRQLWIEGN 242


>gi|324501497|gb|ADY40666.1| Protein lap1 [Ascaris suum]
          Length = 1224

 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 111/194 (57%), Gaps = 6/194 (3%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP S++ +L  +  LD+  N+L  LP+ IG LS L+ L V  N LE+LP++I  CRSL++
Sbjct: 167 IPPSIS-QLTQLQRLDLGHNELDDLPSEIGLLSNLQELYVDQNDLEALPESIVQCRSLQQ 225

Query: 62  LNANFNKLRQLPDTIG-FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           L+ + NKL  LPD IG  E +N  T+S NC  + +LP S+ HL  L +L    N +  L 
Sbjct: 226 LDVSENKLMVLPDDIGDLEQLNDLTVSHNC--LQVLPTSVGHLKKLAILKVDRNAITQLT 283

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             + +   L  L +++N   L  +P S+G L +L  L++  N++  +P +IG    L  L
Sbjct: 284 PAVGSCTALSELYLTENL--LTEVPTSLGNLKALRTLNLDKNQLKEIPSTIGGCISLSVL 341

Query: 181 SLEGNPLVSPPMDV 194
           SL  N L   P+++
Sbjct: 342 SLRDNLLEQLPLEI 355



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 102/180 (56%), Gaps = 3/180 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L+V  N L+ +P SI  L++L+ LD+  N L+ LP  I    +L+EL  + N
Sbjct: 149 GHLRNLRSLEVRENLLRTIPPSISQLTQLQRLDLGHNELDDLPSEIGLLSNLQELYVDQN 208

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP++I  +  +L+ L ++ NK+++LP  +  L  L  L    NCL+ LP  + +L 
Sbjct: 209 DLEALPESI-VQCRSLQQLDVSENKLMVLPDDIGDLEQLNDLTVSHNCLQVLPTSVGHLK 267

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L +L + +N   +  L  ++G   +L EL ++ N +T +P S+G L+ L+ L+L+ N L
Sbjct: 268 KLAILKVDRN--AITQLTPAVGSCTALSELYLTENLLTEVPTSLGNLKALRTLNLDKNQL 325



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 97/189 (51%), Gaps = 5/189 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           AR L    LD   N +K L   +    KLK L +S N +  +P  I N   LEELN   N
Sbjct: 36  ARTLEEAYLDC--NHIKDLEKPLFRCRKLKTLSLSENEIIRVPTDIANLICLEELNLKGN 93

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            +  LP+ I  E   LK L ++ N I  LP ++T LTS+  L      L  +P D+ +L 
Sbjct: 94  DVSDLPEEIK-ECTQLKILDLSSNPITRLPPTITLLTSMTHLGLNDISLTQMPLDIGHLR 152

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L + +N   L T+P SI  L  L  LD+ +N++  LP  IG L  LQ+L ++ N L
Sbjct: 153 NLRSLEVRENL--LRTIPPSISQLTQLQRLDLGHNELDDLPSEIGLLSNLQELYVDQNDL 210

Query: 188 VSPPMDVVE 196
            + P  +V+
Sbjct: 211 EALPESIVQ 219



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 84/148 (56%), Gaps = 3/148 (2%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L V  N L+ LP S+G L KL +L V  N +  L   + +C +L EL    N L ++P +
Sbjct: 249 LTVSHNCLQVLPTSVGHLKKLAILKVDRNAITQLTPAVGSCTALSELYLTENLLTEVPTS 308

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           +G  L  L+TL+++ N++  +P ++    SL VL  R N L+ LP ++  L NL VL++ 
Sbjct: 309 LG-NLKALRTLNLDKNQLKEIPSTIGGCISLSVLSLRDNLLEQLPLEIGRLENLRVLDVC 367

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNK 163
            N   L  LP++I +L +L  L +S ++
Sbjct: 368 NN--RLNFLPFTINVLFNLQALWLSESQ 393



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 77/137 (56%), Gaps = 2/137 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P S+   L  + +L V  N +  L  ++G  + L  L ++ NLL  +P ++ N ++L 
Sbjct: 258 VLPTSV-GHLKKLAILKVDRNAITQLTPAVGSCTALSELYLTENLLTEVPTSLGNLKALR 316

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            LN + N+L+++P TIG   I+L  LS+  N +  LP  +  L +LRVLD   N L  LP
Sbjct: 317 TLNLDKNQLKEIPSTIGG-CISLSVLSLRDNLLEQLPLEIGRLENLRVLDVCNNRLNFLP 375

Query: 121 EDLENLINLEVLNISQN 137
             +  L NL+ L +S++
Sbjct: 376 FTINVLFNLQALWLSES 392



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTIE-NCRSLEELNANFNKLRQLPDTIGFELI 81
             C+P    C  ++ VLD     L+S+P  I+ N R+LEE   + N ++ L   + F   
Sbjct: 3   FSCIP-FFACNRQIDVLDRRQCNLQSVPNDIDRNARTLEEAYLDCNHIKDLEKPL-FRCR 60

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
            LKTLS++ N+I+                        +P D+ NLI LE LN+  N   +
Sbjct: 61  KLKTLSLSENEII-----------------------RVPTDIANLICLEELNLKGN--DV 95

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP  I     L  LD+S N IT LP +I  L  +  L L    L   P+D+
Sbjct: 96  SDLPEEIKECTQLKILDLSSNPITRLPPTITLLTSMTHLGLNDISLTQMPLDI 148


>gi|195451908|ref|XP_002073128.1| GK13318 [Drosophila willistoni]
 gi|194169213|gb|EDW84114.1| GK13318 [Drosophila willistoni]
          Length = 1874

 Score = 97.1 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 64/187 (34%), Positives = 102/187 (54%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++L N+ VL ++   L  LP   G L++L+ L++  NLL+ LP+TI     L+ L+   N
Sbjct: 126 SQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDN 185

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           ++  LP  +G+ L  L  L ++ N++  LP  L  LT L  LD   N L+ LP ++  L+
Sbjct: 186 EIEDLPPYLGY-LPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLV 244

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L  L+++QN   LETLP  I  L  L  L +  N++  L D++G    +Q+L L  N L
Sbjct: 245 SLTDLDLAQNL--LETLPDGIAKLSRLTILKLDQNRLQRLNDTLGSCENMQELILTENFL 302

Query: 188 VSPPMDV 194
              P  +
Sbjct: 303 SELPASI 309



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 68/217 (31%), Positives = 104/217 (47%), Gaps = 28/217 (12%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   +R L  + LD  +N ++ LP +   L +L+ L +S N +  LP  I+N  +L
Sbjct: 28  VPEEILRYSRTLEELFLD--ANHIRDLPKNFFRLQRLRKLGLSDNEIGRLPPDIQNFENL 85

Query: 60  EELNANFNKLRQLPDTI---------------------GF-ELINLKTLSINCNKIVILP 97
            EL+ + N +  +PD I                     GF +L NL  L +N   +  LP
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLP 145

Query: 98  QSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVEL 157
                LT L  L+ R N LK LPE +  L  L+ L++  N   +E LP  +G L  L EL
Sbjct: 146 ADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDN--EIEDLPPYLGYLPGLHEL 203

Query: 158 DVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            + +N++  LP  +G L KL  L +  N L   P ++
Sbjct: 204 WLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEI 240



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 73/216 (33%), Positives = 110/216 (50%), Gaps = 8/216 (3%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L  +  LDV  N+L+ LPN I  L  L  LD++ NLLE+LP  I     L  L  + N+L
Sbjct: 220 LTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLETLPDGIAKLSRLTILKLDQNRL 279

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           ++L DT+G    N++ L +  N +  LP S+  +T L  L+   N L+ LP ++    NL
Sbjct: 280 QRLNDTLG-SCENMQELILTENFLSELPASIGRMTKLSNLNVDRNALEYLPLEIGQCANL 338

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN---P 186
            VL++  N   L+ LP  +G    L  LDVS N++  LP S+  L +L+ + L  N   P
Sbjct: 339 GVLSLRDN--KLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQSQP 395

Query: 187 LVS-PPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKS 221
           L++  P    E G   +  YL  +      +P + S
Sbjct: 396 LLTFQPDTDAETGEQVLSCYLLPQQEYQPIAPARDS 431



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ + A+L  + +L +  N+L+ L +++G    ++ L ++ N L  LP +I     L  
Sbjct: 259 LPDGI-AKLSRLTILKLDQNRLQRLNDTLGSCENMQELILTENFLSELPASIGRMTKLSN 317

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG +  NL  LS+  NK+  LP  L + T L VLD   N L  LP 
Sbjct: 318 LNVDRNALEYLPLEIG-QCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPY 376

Query: 122 DLENLINLEVLNISQN 137
            L NL  L+ + +S+N
Sbjct: 377 SLVNL-QLKAVWLSEN 391



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 51/172 (29%), Positives = 74/172 (43%), Gaps = 27/172 (15%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
            KC+P   GC  +++ +D     L  +P+ I    R+LEEL  + N +R LP    F L 
Sbjct: 2   FKCIPIFKGCNRQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNF-FRLQ 60

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
            L+ L ++ N+I                         LP D++N  NL  L++S+N   +
Sbjct: 61  RLRKLGLSDNEI-----------------------GRLPPDIQNFENLVELDVSRN--DI 95

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMD 193
             +P  I  L SL   D S N I  LP     L+ L  L L    L + P D
Sbjct: 96  PDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPAD 147


>gi|395512688|ref|XP_003760567.1| PREDICTED: protein scribble homolog [Sarcophilus harrisii]
          Length = 1789

 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 111/187 (59%), Gaps = 5/187 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 116

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   + +LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 117 LSRLPD--GFTQLRSLAHLALNDVSLQVLPGDVGNLANLVTLELRENLLKSLPTSLSFLV 174

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++TLP  +G LR+L  L +  N L
Sbjct: 175 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSTLPPELGNLRRLVCLDVSENKL 232

Query: 188 VSPPMDV 194
              P +V
Sbjct: 233 EHLPAEV 239



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 84/164 (51%), Gaps = 3/164 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 139 SLQVLPGDVG-NLANLVTLELRENLLKSLPTSLSFLVKLEQLDLGGNDLEVLPDTLGALP 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSI 171
           NL  L + +N   L TLP  +G L  LV LDVS NK+  LP  +
Sbjct: 198 NLRELWLDRN--QLSTLPPELGNLRRLVCLDVSENKLEHLPAEV 239



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 100/207 (48%), Gaps = 22/207 (10%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 150 LANLVTLELRENLLKSLPTSLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 209

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ NK+  LP  ++ LT L  L    N L+ LP+ +  L  L
Sbjct: 210 STLPPELG-NLRRLVCLDVSENKLEHLPAEVSGLTLLTDLLLSQNLLERLPDGIGQLKQL 268

Query: 130 EVLNISQNF---------------------QYLETLPYSIGLLMSLVELDVSYNKITTLP 168
            +L + QN                        L  LP S+G L  L  L+V  N++ TLP
Sbjct: 269 SILKVDQNRLCEVTEAIGECENLSELILTENMLTALPRSLGKLTKLTNLNVDRNRLGTLP 328

Query: 169 DSIGCLRKLQKLSLEGNPLVSPPMDVV 195
             +G    L  LSL  N L S P ++ 
Sbjct: 329 AEVGGCTSLNVLSLRDNRLASLPPELA 355



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 120 LPDGFT-QLRSLAHLALNDVSLQVLPGDVGNLANLVTLELRENLLKSLPTSLSFLVKLEQ 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 179 LDLGGNDLEVLPDTLGA-LPNLRELWLDRNQLSTLPPELGNLRRLVCLDVSENKLEHLPA 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L  L  L +SQN   LE LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 238 EVSGLTLLTDLLLSQNL--LERLPDGIGQLKQLSILKVDQNRLCEVTEAIGECENLSELI 295

Query: 182 LEGNPLVSPP 191
           L  N L + P
Sbjct: 296 LTENMLTALP 305



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 107/208 (51%), Gaps = 6/208 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 188 VLPDTLGA-LPNLRELWLDRNQLSTLPPELGNLRRLVCLDVSENKLEHLPAEVSGLTLLT 246

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N L +LPD IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 247 DLLLSQNLLERLPDGIG-QLKQLSILKVDQNRLCEVTEAIGECENLSELILTENMLTALP 305

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N   L TLP  +G   SL  L +  N++ +LP  +    +L  L
Sbjct: 306 RSLGKLTKLTNLNVDRN--RLGTLPAEVGGCTSLNVLSLRDNRLASLPPELAGTTELHVL 363

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSE 208
            + GN L S P  +    L A+  +L+E
Sbjct: 364 DVAGNRLQSLPFALTHLNLKAL--WLAE 389



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           LKC+P    C   ++ +D     L+++P+ I    RSLEEL  + N+LR+LP    F L+
Sbjct: 2   LKCIP-LWRCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLL 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I                       + LP ++ N + L  L++S+N   +
Sbjct: 60  NLRKLGLSDNEI-----------------------QRLPPEVANFMQLVELDVSRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P SI    +L   D S N ++ LPD    LR L  L+L    L   P DV
Sbjct: 95  PEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQVLPGDV 147


>gi|418680656|ref|ZP_13241900.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|400327600|gb|EJO79845.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|455665929|gb|EMF31411.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 309

 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 107/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +H NQL  LP  I  L  L++L +  N L +LPK IE  ++L+ L+   N
Sbjct: 67  GQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSN 126

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L +  N++  L + +  L +L+ LD   N L +LP ++E L 
Sbjct: 127 QLTVLPQEIE-QLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLK 185

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL+ L +S+N     T P  IG L +L  L ++ N++T LP+ I  L+KLQ L L  N L
Sbjct: 186 NLKSLYLSEN--QFATFPKEIGQLQNLKVLFLNNNQLTILPNEIAKLKKLQYLYLSDNQL 243

Query: 188 VSPPMDV 194
           ++ P ++
Sbjct: 244 ITLPKEI 250



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 104/186 (55%), Gaps = 3/186 (1%)

Query: 11  LNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLR 70
           L V VLD+   +LK LP  IG L  L+ L +  N L  LP+ IE  ++L+ L    N+L 
Sbjct: 47  LEVRVLDLSRQKLKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLT 106

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            LP  I  +L NL+ L +  N++ +LPQ +  L +L++L  R N L +L +D+E L NL+
Sbjct: 107 TLPKEIE-QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLK 165

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            L++S N   L TLP  I  L +L  L +S N+  T P  IG L+ L+ L L  N L   
Sbjct: 166 SLDLSNN--QLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQLTIL 223

Query: 191 PMDVVE 196
           P ++ +
Sbjct: 224 PNEIAK 229



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/181 (38%), Positives = 103/181 (56%), Gaps = 3/181 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+ VLD+ SNQL  LP  I  L  L++L +  N L +L K IE  ++L+ L+ + N+
Sbjct: 114 QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQ 173

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           L  LP+ I  +L NLK+L ++ N+    P+ +  L +L+VL    N L  LP ++  L  
Sbjct: 174 LTTLPNEIE-QLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQLTILPNEIAKLKK 232

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L+ L +S N   L TLP  I  L +L  LD+  N++ TLP+ I  L+ LQ L L  N L 
Sbjct: 233 LQYLYLSDN--QLITLPKEIEQLKNLKSLDLRNNQLKTLPNEIEQLKNLQTLYLNNNQLS 290

Query: 189 S 189
           S
Sbjct: 291 S 291



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 92/160 (57%), Gaps = 4/160 (2%)

Query: 49  LPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRV 108
           L K ++N   +  L+ +  KL+ LP  IG +L NL+ L ++ N++ +LPQ +  L +L++
Sbjct: 39  LTKALQNPLEVRVLDLSRQKLKTLPIEIG-QLKNLQRLYLHYNQLTVLPQEIEQLKNLQL 97

Query: 109 LDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           L  R N L +LP+++E L NL+VL++  N   L  LP  I  L +L  L +  N++TTL 
Sbjct: 98  LYLRSNRLTTLPKEIEQLKNLQVLDLGSN--QLTVLPQEIEQLKNLQLLYLRSNRLTTLS 155

Query: 169 DSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSE 208
             I  L+ L+ L L  N L + P + +EQ  +    YLSE
Sbjct: 156 KDIEQLQNLKSLDLSNNQLTTLPNE-IEQLKNLKSLYLSE 194



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 35/62 (56%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A+L  +  L +  NQL  LP  I  L  LK LD+  N L++LP  IE  ++L+ L  N N
Sbjct: 228 AKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLRNNQLKTLPNEIEQLKNLQTLYLNNN 287

Query: 68  KL 69
           +L
Sbjct: 288 QL 289


>gi|402879350|ref|XP_003903306.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog [Papio
           anubis]
          Length = 1662

 Score = 97.1 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 108/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 116

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 117 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 174

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 175 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 188 VSPPMD 193
              P +
Sbjct: 233 EELPAE 238



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 7/192 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   L
Sbjct: 27  VPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP   T L SL  L      L++L
Sbjct: 85  VELDVSRNDIPEIPESIKF-CKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L++
Sbjct: 144 PGDVGNLANLVTLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRE 201

Query: 180 LSLEGNPLVSPP 191
           L L+ N L + P
Sbjct: 202 LWLDRNQLSALP 213



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 70/202 (34%), Positives = 106/202 (52%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 188 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLT 246

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N LR+LPD IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 247 DLLLSQNLLRRLPDGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALP 305

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LETLP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 306 RSLGKLTKLTNLNVDRN--HLETLPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVL 363

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 364 DVAGNRLQSLPFALTHLNLKAL 385



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 139 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 198 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 236



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 73/204 (35%), Positives = 96/204 (47%), Gaps = 23/204 (11%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 150 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 209

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LP+ +  L  L
Sbjct: 210 SALPPELG-NLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL 268

Query: 130 EVLNISQNF---------------------QYLETLPYSIGLLMSLVELDVSYNKITTLP 168
            +L + QN                        L  LP S+G L  L  L+V  N + TLP
Sbjct: 269 SILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLETLP 328

Query: 169 DSIGCLRKLQKLSLEGNPL-VSPP 191
             IG    L  LSL  N L V PP
Sbjct: 329 PEIGGCVALSVLSLRDNRLAVLPP 352



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 104/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 120 LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 179 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPA 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L+ L  L +SQN   L  LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 238 ELGGLVLLTDLLLSQNL--LRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 295

Query: 182 LEGNPLVSPP 191
           L  N L++ P
Sbjct: 296 LTENLLMALP 305



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/136 (34%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP+++     L  
Sbjct: 258 LPDGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTN 316

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++ +LP  L H   L VLD   N L+SLP 
Sbjct: 317 LNVDRNHLETLPPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPF 375

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 376 ALTHL-NLKALWLAEN 390



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           LKC+P    C   ++ +D     L+++P+ I    RSLEEL  + N+LR+LP    F L+
Sbjct: 2   LKCIP-LWRCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLL 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I                       + LP ++ N + L  L++S+N   +
Sbjct: 60  NLRKLGLSDNEI-----------------------QRLPPEVANFMQLVELDVSRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P SI    +L   D S N ++ LPD    LR L  L+L    L + P DV
Sbjct: 95  PEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDV 147


>gi|326434950|gb|EGD80520.1| hypothetical protein PTSG_01111 [Salpingoeca sp. ATCC 50818]
          Length = 1133

 Score = 97.1 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 72/218 (33%), Positives = 126/218 (57%), Gaps = 8/218 (3%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE + A   +++ LDV  N+L  LP+ +  + +L++L+ S N++  LP    + +SL E
Sbjct: 32  LPEDVDAA--DLIELDVAENRLVQLPSQLLDMIELELLNCSHNIITHLPD-FSSLQSLTE 88

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHL-TSLRVLDARLNCLKSLP 120
           L+   N+L  LP+ +    + L+ L I+ NKI  LP  + +L  +L+ L+   N L+ LP
Sbjct: 89  LHLGRNQLSSLPEDVC--ELPLEILDISSNKIHELPAHIGNLRDTLKELNISNNALRILP 146

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           + + +L +L  LNI++N   L+TLP  +G L +LV LD+S N I+ LP S+  L  L  L
Sbjct: 147 DAVCSLHSLRELNIARN--KLDTLPEGLGSLRALVTLDMSSNAISVLPISMADLAHLTSL 204

Query: 181 SLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDHKSPK 218
           +++ NPL+ PP  +  +G   +  +L ++     K+ +
Sbjct: 205 NVDSNPLMQPPPHICSRGRVHIINFLQQEKQRAAKATQ 242



 Score = 38.1 bits (87), Expect = 4.8,   Method: Composition-based stats.
 Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 4/92 (4%)

Query: 105 SLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
           +LR+    L     LPED++    +E L++++N   L  LP  +  ++ L  L+ S+N I
Sbjct: 18  TLRLRALNLRKFPELPEDVDAADLIE-LDVAEN--RLVQLPSQLLDMIELELLNCSHNII 74

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           T LPD    L+ L +L L  N L S P DV E
Sbjct: 75  THLPD-FSSLQSLTELHLGRNQLSSLPEDVCE 105


>gi|124002734|ref|ZP_01687586.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123991962|gb|EAY31349.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 500

 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 110/194 (56%), Gaps = 4/194 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ LT+ L+ + V+ +  NQL  LPN IG LS+LKVL +  NLL +LP++I N   L  
Sbjct: 254 LPKELTS-LVQLQVVKLEHNQLLELPNDIGKLSQLKVLSLHHNLLRALPESIGNLTLLPT 312

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+L  LP ++G  + +LK++ +  N +  LP+S++ L  +  + A  N +  LP 
Sbjct: 313 LQLSNNRLELLPSSLG-NMASLKSIWVRKNNLQTLPKSISQLKKIERIYASQNQISLLPV 371

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L  L+ L IS N   L  +P  +  L  L  LD S N+IT+LP+ I  LR L+ L 
Sbjct: 372 ELAELTQLKSLAISGNL--LTEIPSELWGLEELYYLDASRNQITSLPNKISDLRSLRILV 429

Query: 182 LEGNPLVSPPMDVV 195
           L  N L + P  + 
Sbjct: 430 LSHNRLRTLPFGIT 443



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/175 (37%), Positives = 100/175 (57%), Gaps = 5/175 (2%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           +NQL   P  +  L KLK+L +  N ++ LP+ I++ +SLE L+   N L  LP  I   
Sbjct: 66  NNQLTVFPKVLFQLKKLKILRLYNNNIKHLPQGIDSLKSLEVLDIQRNSLVDLPGKI-VR 124

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL  L+I  NK+  LP+++  L  +RV +A  N LK LP    +L  LE L + +N  
Sbjct: 125 LRNLTQLNIANNKVKELPENIGKLKKMRVFEAYGNQLKQLPASFSSLRKLESLGLGKN-- 182

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            LE++  S+G   +L  LD+S N++T +PD++G L+KL  L L+ N L   P  +
Sbjct: 183 QLESV--SLGKYKNLQSLDISRNRLTKIPDNLGSLKKLTSLFLQQNNLTKLPEKI 235



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 110/193 (56%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP++L + L  +  L +  N L  LP  IG LS+L+ L ++ N ++ LPK + +   L+ 
Sbjct: 208 IPDNLGS-LKKLTSLFLQQNNLTKLPEKIGALSQLRRLYLNENKIKQLPKELTSLVQLQV 266

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           +    N+L +LP+ IG +L  LK LS++ N +  LP+S+ +LT L  L    N L+ LP 
Sbjct: 267 VKLEHNQLLELPNDIG-KLSQLKVLSLHHNLLRALPESIGNLTLLPTLQLSNNRLELLPS 325

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L N+ +L+ + + +N   L+TLP SI  L  +  +  S N+I+ LP  +  L +L+ L+
Sbjct: 326 SLGNMASLKSIWVRKN--NLQTLPKSISQLKKIERIYASQNQISLLPVELAELTQLKSLA 383

Query: 182 LEGNPLVSPPMDV 194
           + GN L   P ++
Sbjct: 384 ISGNLLTEIPSEL 396



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 87/158 (55%), Gaps = 3/158 (1%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           S  K +D++     +L + ++N   ++ LN +  KL+++P  I       +    N N++
Sbjct: 11  SAQKKMDINRLFYSNLDQALQNKSKVQRLNLSSQKLKKIPQNIVLLKNLEELNLGN-NQL 69

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
            + P+ L  L  L++L    N +K LP+ +++L +LEVL+I +N   L  LP  I  L +
Sbjct: 70  TVFPKVLFQLKKLKILRLYNNNIKHLPQGIDSLKSLEVLDIQRN--SLVDLPGKIVRLRN 127

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +L+++ NK+  LP++IG L+K++     GN L   P
Sbjct: 128 LTQLNIANNKVKELPENIGKLKKMRVFEAYGNQLKQLP 165



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/156 (38%), Positives = 85/156 (54%), Gaps = 3/156 (1%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           SK++ L++S   L+ +P+ I   ++LEELN   N+L   P  + F+L  LK L +  N I
Sbjct: 34  SKVQRLNLSSQKLKKIPQNIVLLKNLEELNLGNNQLTVFPKVL-FQLKKLKILRLYNNNI 92

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
             LPQ +  L SL VLD + N L  LP  +  L NL  LNI+ N   ++ LP +IG L  
Sbjct: 93  KHLPQGIDSLKSLEVLDIQRNSLVDLPGKIVRLRNLTQLNIANN--KVKELPENIGKLKK 150

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           +   +   N++  LP S   LRKL+ L L  N L S
Sbjct: 151 MRVFEAYGNQLKQLPASFSSLRKLESLGLGKNQLES 186



 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 78/136 (57%), Gaps = 2/136 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+S++ +L  +  +    NQ+  LP  +  L++LK L +SGNLL  +P  +     L  
Sbjct: 346 LPKSIS-QLKKIERIYASQNQISLLPVELAELTQLKSLAISGNLLTEIPSELWGLEELYY 404

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+A+ N++  LP+ I  +L +L+ L ++ N++  LP  +T L +LR L    N L  LP 
Sbjct: 405 LDASRNQITSLPNKIS-DLRSLRILVLSHNRLRTLPFGITRLKNLRELYLDNNQLAKLPP 463

Query: 122 DLENLINLEVLNISQN 137
           ++  L+NL++  + +N
Sbjct: 464 NMGALLNLKIFTMKRN 479


>gi|395740179|ref|XP_003777373.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog [Pongo
           abelii]
          Length = 1780

 Score = 97.1 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 108/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 116

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 117 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 174

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 175 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 188 VSPPMD 193
              P +
Sbjct: 233 EELPAE 238



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 7/192 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   L
Sbjct: 27  VPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP   T L SL  L      L++L
Sbjct: 85  VELDVSRNDIPEIPESIKF-CKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L++
Sbjct: 144 PGDVGNLANLVTLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRE 201

Query: 180 LSLEGNPLVSPP 191
           L L+ N L + P
Sbjct: 202 LWLDRNQLSALP 213



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 69/202 (34%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 188 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLT 246

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N LR+LPD IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 247 DLLLSQNLLRRLPDGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALP 305

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 306 RSLGKLTKLTNLNVDRN--HLEALPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVL 363

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 364 DVAGNRLQSLPFALTHLNLKAL 385



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 139 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 198 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 236



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 104/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 120 LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 179 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPA 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L+ L  L +SQN   L  LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 238 ELGGLVLLTDLLLSQNL--LRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 295

Query: 182 LEGNPLVSPP 191
           L  N L++ P
Sbjct: 296 LTENLLMALP 305



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 150 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 209

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LP+ +  L  L
Sbjct: 210 SALPPELG-NLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL 268

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
            +L + QN   L  +  +IG   +L EL ++ N +  LP S+G L KL  L+++ N L +
Sbjct: 269 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEA 326

Query: 190 PPMDV 194
            P ++
Sbjct: 327 LPPEI 331



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/136 (34%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP+++     L  
Sbjct: 258 LPDGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTN 316

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++ +LP  L H   L VLD   N L+SLP 
Sbjct: 317 LNVDRNHLEALPPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPF 375

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 376 ALTHL-NLKALWLAEN 390



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           LKC+P    C   ++ +D     L+++P+ I    RSLEEL  + N+LR+LP    F L+
Sbjct: 2   LKCIP-LWRCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLL 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I                       + LP ++ N + L  L++S+N   +
Sbjct: 60  NLRKLGLSDNEI-----------------------QRLPPEVANFMQLVELDVSRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P SI    +L   D S N ++ LPD    LR L  L+L    L + P DV
Sbjct: 95  PEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDV 147


>gi|355698275|gb|EHH28823.1| hypothetical protein EGK_19345, partial [Macaca mulatta]
          Length = 1612

 Score = 97.1 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 108/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 6   RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 65

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 66  LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 123

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 124 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 181

Query: 188 VSPPMD 193
              P +
Sbjct: 182 EELPAE 187



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 70/202 (34%), Positives = 106/202 (52%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 137 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLT 195

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N LR+LPD IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 196 DLLLSQNLLRRLPDGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALP 254

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LETLP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 255 RSLGKLTKLTNLNVDRN--HLETLPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVL 312

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 313 DVAGNRLQSLPFALTHLNLKAL 334



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 28  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 87

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 88  SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 146

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 147 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 185



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 73/204 (35%), Positives = 96/204 (47%), Gaps = 23/204 (11%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 99  LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 158

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LP+ +  L  L
Sbjct: 159 SALPPELG-NLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL 217

Query: 130 EVLNISQNF---------------------QYLETLPYSIGLLMSLVELDVSYNKITTLP 168
            +L + QN                        L  LP S+G L  L  L+V  N + TLP
Sbjct: 218 SILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLETLP 277

Query: 169 DSIGCLRKLQKLSLEGNPL-VSPP 191
             IG    L  LSL  N L V PP
Sbjct: 278 PEIGGCVALSVLSLRDNRLAVLPP 301



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 104/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 69  LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 127

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 128 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPA 186

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L+ L  L +SQN   L  LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 187 ELGGLVLLTDLLLSQNL--LRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 244

Query: 182 LEGNPLVSPP 191
           L  N L++ P
Sbjct: 245 LTENLLMALP 254



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/136 (34%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP+++     L  
Sbjct: 207 LPDGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTN 265

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++ +LP  L H   L VLD   N L+SLP 
Sbjct: 266 LNVDRNHLETLPPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPF 324

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 325 ALTHL-NLKALWLAEN 339



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 48/160 (30%)

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLN----------------------- 114
           F L+NL+ L ++ N+I  LP  + +   L  LD   N                       
Sbjct: 5   FRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGN 64

Query: 115 -----------------------CLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLL 151
                                   L++LP D+ NL NL  L + +N   L++LP S+  L
Sbjct: 65  PLSRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENL--LKSLPASLSFL 122

Query: 152 MSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           + L +LD+  N +  LPD++G L  L++L L+ N L + P
Sbjct: 123 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALP 162



 Score = 46.2 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 2/98 (2%)

Query: 97  PQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVE 156
           PQ    L +LR L    N ++ LP ++ N + L  L++S+N   +  +P SI    +L  
Sbjct: 1   PQPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRN--DIPEIPESIKFCKALEI 58

Query: 157 LDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            D S N ++ LPD    LR L  L+L    L + P DV
Sbjct: 59  ADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDV 96


>gi|255071327|ref|XP_002507745.1| predicted protein [Micromonas sp. RCC299]
 gi|226523020|gb|ACO69003.1| predicted protein [Micromonas sp. RCC299]
          Length = 419

 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 78/181 (43%), Positives = 102/181 (56%), Gaps = 3/181 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  NQL  LP  IG L+ L  L +SGN L S+P  I    SL EL  N N+L  LP  
Sbjct: 217 LDLKDNQLTNLPAEIGQLTSLWQLHLSGNQLTSVPAEIGQLASLTELELNGNQLTSLPAE 276

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L +LK L +N N++  LP  +  LTSLR+L  R N L S+P ++  L +L  L + 
Sbjct: 277 IG-QLTSLKELELNGNQLTSLPAEIGQLTSLRLLSLRDNLLTSVPAEIGQLTSLTELELH 335

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            N   L ++P  IGLL SL  L    N++T+LP  IG L  L+ L LE N L S P  + 
Sbjct: 336 GN--QLTSVPAEIGLLTSLRGLGFKDNQLTSLPAEIGQLTSLRGLGLECNLLTSVPAAIR 393

Query: 196 E 196
           E
Sbjct: 394 E 394



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 103/193 (53%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P  L  RL  +  L++  NQL  +P  IG L+ L  L +  N L S+P  I    SL E
Sbjct: 20  VPAEL-GRLSALRKLNLEGNQLTSMPAEIGQLTSLTELSLGENQLRSVPAEIGQLTSLTE 78

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N+L  +P  IG +L +L  L +  N +  +P  L  LTSL  L    N L SLP 
Sbjct: 79  LNLFDNQLTSVPAEIG-QLTSLVQLDLEYNHLTSVPAELWQLTSLERLILDNNQLTSLPA 137

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++  L +L+ L +  +   L +LP  IG L SL E+ +  N++T+LP  IG L  L+KL 
Sbjct: 138 EIGQLTSLKELGL--HHIQLTSLPAEIGQLTSLREVHLYGNQLTSLPAEIGQLTSLEKLY 195

Query: 182 LEGNPLVSPPMDV 194
           L GN L S P ++
Sbjct: 196 LYGNQLTSVPAEL 208



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 108/208 (51%), Gaps = 24/208 (11%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           ++ NQL  LP  IG L+ L+ L + GN L S+P  +    SLEEL+   N+L  LP  IG
Sbjct: 173 LYGNQLTSLPAEIGQLTSLEKLYLYGNQLTSVPAELWQLTSLEELDLKDNQLTNLPAEIG 232

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
            +L +L  L ++ N++  +P  +  L SL  L+   N L SLP ++  L +L+ L ++ N
Sbjct: 233 -QLTSLWQLHLSGNQLTSVPAEIGQLASLTELELNGNQLTSLPAEIGQLTSLKELELNGN 291

Query: 138 F---------------------QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
                                   L ++P  IG L SL EL++  N++T++P  IG L  
Sbjct: 292 QLTSLPAEIGQLTSLRLLSLRDNLLTSVPAEIGQLTSLTELELHGNQLTSVPAEIGLLTS 351

Query: 177 LQKLSLEGNPLVSPPMDVVEQGLSAVKG 204
           L+ L  + N L S P ++ +  L++++G
Sbjct: 352 LRGLGFKDNQLTSLPAEIGQ--LTSLRG 377



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 79/142 (55%), Gaps = 3/142 (2%)

Query: 53  IENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDAR 112
           +EN R +E     F  +  +P  +G  L  L+ L++  N++  +P  +  LTSL  L   
Sbjct: 1   MENGRVVELELEWFGLIGAVPAELG-RLSALRKLNLEGNQLTSMPAEIGQLTSLTELSLG 59

Query: 113 LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
            N L+S+P ++  L +L  LN+  N   L ++P  IG L SLV+LD+ YN +T++P  + 
Sbjct: 60  ENQLRSVPAEIGQLTSLTELNLFDN--QLTSVPAEIGQLTSLVQLDLEYNHLTSVPAELW 117

Query: 173 CLRKLQKLSLEGNPLVSPPMDV 194
            L  L++L L+ N L S P ++
Sbjct: 118 QLTSLERLILDNNQLTSLPAEI 139



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 85/173 (49%), Gaps = 24/173 (13%)

Query: 44  NLLESLPKTIENCRSLEELNANFNKLRQLPDTIG----------------------FELI 81
            L+ ++P  +    +L +LN   N+L  +P  IG                       +L 
Sbjct: 15  GLIGAVPAELGRLSALRKLNLEGNQLTSMPAEIGQLTSLTELSLGENQLRSVPAEIGQLT 74

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           +L  L++  N++  +P  +  LTSL  LD   N L S+P +L  L +LE L +  N   L
Sbjct: 75  SLTELNLFDNQLTSVPAEIGQLTSLVQLDLEYNHLTSVPAELWQLTSLERLILDNN--QL 132

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            +LP  IG L SL EL + + ++T+LP  IG L  L+++ L GN L S P ++
Sbjct: 133 TSLPAEIGQLTSLKELGLHHIQLTSLPAEIGQLTSLREVHLYGNQLTSLPAEI 185



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 67/142 (47%), Gaps = 24/142 (16%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGN----------------------- 44
            +L ++  L+++ NQL  LP  IG L+ LK L+++GN                       
Sbjct: 255 GQLASLTELELNGNQLTSLPAEIGQLTSLKELELNGNQLTSLPAEIGQLTSLRLLSLRDN 314

Query: 45  LLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLT 104
           LL S+P  I    SL EL  + N+L  +P  IG  L +L+ L    N++  LP  +  LT
Sbjct: 315 LLTSVPAEIGQLTSLTELELHGNQLTSVPAEIGL-LTSLRGLGFKDNQLTSLPAEIGQLT 373

Query: 105 SLRVLDARLNCLKSLPEDLENL 126
           SLR L    N L S+P  +  L
Sbjct: 374 SLRGLGLECNLLTSVPAAIREL 395


>gi|426360967|ref|XP_004047699.1| PREDICTED: protein scribble homolog isoform 2 [Gorilla gorilla
           gorilla]
          Length = 1668

 Score = 97.1 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 108/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 116

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 117 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 174

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 175 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 188 VSPPMD 193
              P +
Sbjct: 233 EELPAE 238



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 7/192 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   L
Sbjct: 27  VPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP   T L SL  L      L++L
Sbjct: 85  VELDVSRNDIPEIPESIKF-CKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L++
Sbjct: 144 PGDVGNLANLVTLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRE 201

Query: 180 LSLEGNPLVSPP 191
           L L+ N L + P
Sbjct: 202 LWLDRNQLSALP 213



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 69/202 (34%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 188 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLT 246

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N LR+LPD IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 247 DLLLSQNLLRRLPDGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALP 305

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 306 RSLGKLTKLTNLNVDRN--HLEALPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVL 363

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 364 DVAGNRLQSLPFALTHLNLKAL 385



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 139 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 198 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 236



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 104/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 120 LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 179 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPA 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L+ L  L +SQN   L  LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 238 ELGGLVLLTDLLLSQNL--LRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 295

Query: 182 LEGNPLVSPP 191
           L  N L++ P
Sbjct: 296 LTENLLMALP 305



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 150 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 209

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LP+ +  L  L
Sbjct: 210 SALPPELG-NLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL 268

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
            +L + QN   L  +  +IG   +L EL ++ N +  LP S+G L KL  L+++ N L +
Sbjct: 269 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEA 326

Query: 190 PPMDV 194
            P ++
Sbjct: 327 LPPEI 331



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/136 (34%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP+++     L  
Sbjct: 258 LPDGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTN 316

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++ +LP  L H   L VLD   N L+SLP 
Sbjct: 317 LNVDRNHLEALPPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPF 375

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 376 ALTHL-NLKALWLAEN 390



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           LKC+P    C   ++ +D     L+++P+ I    RSLEEL  + N+LR+LP    F L+
Sbjct: 2   LKCIP-LWRCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLL 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I                       + LP ++ N + L  L++S+N   +
Sbjct: 60  NLRKLGLSDNEI-----------------------QRLPPEVANFMQLVELDVSRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P SI    +L   D S N ++ LPD    LR L  L+L    L + P DV
Sbjct: 95  PEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDV 147


>gi|426360965|ref|XP_004047698.1| PREDICTED: protein scribble homolog isoform 1 [Gorilla gorilla
           gorilla]
          Length = 1643

 Score = 97.1 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 108/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 116

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 117 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 174

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 175 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 188 VSPPMD 193
              P +
Sbjct: 233 EELPAE 238



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 7/192 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   L
Sbjct: 27  VPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP   T L SL  L      L++L
Sbjct: 85  VELDVSRNDIPEIPESIKF-CKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L++
Sbjct: 144 PGDVGNLANLVTLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRE 201

Query: 180 LSLEGNPLVSPP 191
           L L+ N L + P
Sbjct: 202 LWLDRNQLSALP 213



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 69/202 (34%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 188 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLT 246

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N LR+LPD IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 247 DLLLSQNLLRRLPDGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALP 305

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 306 RSLGKLTKLTNLNVDRN--HLEALPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVL 363

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 364 DVAGNRLQSLPFALTHLNLKAL 385



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 139 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 198 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 236



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 104/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 120 LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 179 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPA 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L+ L  L +SQN   L  LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 238 ELGGLVLLTDLLLSQNL--LRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 295

Query: 182 LEGNPLVSPP 191
           L  N L++ P
Sbjct: 296 LTENLLMALP 305



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 150 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 209

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LP+ +  L  L
Sbjct: 210 SALPPELG-NLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL 268

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
            +L + QN   L  +  +IG   +L EL ++ N +  LP S+G L KL  L+++ N L +
Sbjct: 269 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEA 326

Query: 190 PPMDV 194
            P ++
Sbjct: 327 LPPEI 331



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/136 (34%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP+++     L  
Sbjct: 258 LPDGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTN 316

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++ +LP  L H   L VLD   N L+SLP 
Sbjct: 317 LNVDRNHLEALPPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPF 375

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 376 ALTHL-NLKALWLAEN 390



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           LKC+P    C   ++ +D     L+++P+ I    RSLEEL  + N+LR+LP    F L+
Sbjct: 2   LKCIP-LWRCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLL 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I                       + LP ++ N + L  L++S+N   +
Sbjct: 60  NLRKLGLSDNEI-----------------------QRLPPEVANFMQLVELDVSRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P SI    +L   D S N ++ LPD    LR L  L+L    L + P DV
Sbjct: 95  PEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDV 147


>gi|358419356|ref|XP_003584212.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1-like
           [Bos taurus]
          Length = 1052

 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 119/250 (47%), Gaps = 44/250 (17%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P  L A L+++  LDV  N+L  LP+S   LS+L+ LDV  N L + P+ +    +LEE
Sbjct: 148 LPAQLGA-LVHLEELDVSFNRLAHLPDSFAGLSRLRTLDVDHNQLTAFPRQLLQLVALEE 206

Query: 62  LNANFNKLRQLPDTI---------------------GF-ELINLKTLSINCNKIVILPQS 99
           L+ + N+LR LP+ I                     GF EL +L++L ++ N +  LP  
Sbjct: 207 LDVSSNRLRGLPEDISALRALKILWLSGAELGTLPSGFCELASLESLMLDNNGLRALPAQ 266

Query: 100 LTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNF--------------------- 138
            + L  L++L+   N L+  P  L  L  LE L +S+N                      
Sbjct: 267 FSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPCLISGLGRLLTLWLDN 326

Query: 139 QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQG 198
             +  LP SI  L  L EL +  N+I  LPD+ G L ++    ++ NPL+ PP +V  +G
Sbjct: 327 NRIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKG 386

Query: 199 LSAVKGYLSE 208
           +  +  Y  E
Sbjct: 387 IPYIAAYQKE 396



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 100/185 (54%), Gaps = 4/185 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCL-PNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +P+++     ++  LDV  N+L  L   ++G L +L+ L++S N L +LP  +     LE
Sbjct: 100 LPQAVAELGHHLTELDVSHNRLSVLGAEAVGALRELRKLNLSHNQLPALPAQLGALVHLE 159

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN+L  LPD+    L  L+TL ++ N++   P+ L  L +L  LD   N L+ LP
Sbjct: 160 ELDVSFNRLAHLPDSFA-GLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLP 218

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           ED+  L  L++L +S     L TLP     L SL  L +  N +  LP     L++L+ L
Sbjct: 219 EDISALRALKILWLSG--AELGTLPSGFCELASLESLMLDNNGLRALPAQFSRLQRLKML 276

Query: 181 SLEGN 185
           +L  N
Sbjct: 277 NLSSN 281



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 80/146 (54%), Gaps = 8/146 (5%)

Query: 55  NCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLT----HLTSLRVLD 110
           N   +E LN   N L ++PD +G  L +L+ L +  N+   LPQ++     HLT L V  
Sbjct: 59  NIGDIEVLNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFAQLPQAVAELGHHLTELDVSH 118

Query: 111 ARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDS 170
            RL+ L +  E +  L  L  LN+S N   L  LP  +G L+ L ELDVS+N++  LPDS
Sbjct: 119 NRLSVLGA--EAVGALRELRKLNLSHN--QLPALPAQLGALVHLEELDVSFNRLAHLPDS 174

Query: 171 IGCLRKLQKLSLEGNPLVSPPMDVVE 196
              L +L+ L ++ N L + P  +++
Sbjct: 175 FAGLSRLRTLDVDHNQLTAFPRQLLQ 200


>gi|148230653|ref|NP_001085672.1| leucine-rich repeat-containing protein 40 [Xenopus laevis]
 gi|82236544|sp|Q6GPJ5.1|LRC40_XENLA RecName: Full=Leucine-rich repeat-containing protein 40
 gi|49257387|gb|AAH73124.1| MGC84527 protein [Xenopus laevis]
          Length = 605

 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 108/207 (52%), Gaps = 28/207 (13%)

Query: 5   SLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNA 64
           S   +L  +V  ++ SN+L  LP  IG +  L+ LD + NLLE++P ++    SLE+L  
Sbjct: 191 SSVGQLTGLVKFNLSSNKLTALPTEIGKMKNLRQLDCTSNLLENVPASVAGMESLEQLYL 250

Query: 65  NFNKLRQLPDTIGFELINLKTLSINCNKIVIL-PQSLTHLTSLRVLDARLNCLKSLPEDL 123
             NKL  LP+ + F L  LK L +  N+I  L P+ L +L+SL VL+ R N LK LP++ 
Sbjct: 251 RQNKLTYLPE-LPF-LTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPKE- 307

Query: 124 ENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLE 183
                                   I LL  L  LD+S N I +LPD++G L  L+ L L+
Sbjct: 308 ------------------------ISLLKGLERLDLSNNDIGSLPDTLGSLPNLKSLQLD 343

Query: 184 GNPLVSPPMDVVEQGLSAVKGYLSEKM 210
           GNPL     D++ +G   +  YL  ++
Sbjct: 344 GNPLRGIRRDILNKGTQELLKYLKGRV 370



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 62/172 (36%), Positives = 94/172 (54%), Gaps = 3/172 (1%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN+L+ L   I  L  L VLD+  N + SLP  I    +L++LN + NK++QLP+ +   
Sbjct: 91  SNKLQALSEDISLLPALVVLDIHDNQIASLPCAIRELTNLQKLNISHNKIKQLPNELQ-H 149

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NLK+  +  N++  LP S+ HL+ L  LD   NCL+S+   +  L  L   N+S N  
Sbjct: 150 LQNLKSFLLQHNQLEELPDSIGHLSILEELDVSNNCLRSVSSSVGQLTGLVKFNLSSN-- 207

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            L  LP  IG + +L +LD + N +  +P S+  +  L++L L  N L   P
Sbjct: 208 KLTALPTEIGKMKNLRQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLP 259



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 6/205 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSI---GCLSKLKVLDVSGNLLESLP-KTIENCRSLEELNAN 65
           ++ +  L+    Q   +P ++      S +  ++ S N L  +P + +E   S+ ++N  
Sbjct: 401 IMTLKTLEYCEKQASLIPEAVFNAAASSPITTVNFSKNQLTEVPARIVEMKDSVYDVNLG 460

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
           FNK+  +   +   L+ L  L +  N +  LP  +  LT L+ +    N  K  P+ L  
Sbjct: 461 FNKISSISLNLCM-LLKLTHLDMRNNALASLPPEMEALTRLQSIILSFNRFKHFPDVLYT 519

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           + NLE + IS N Q     P  +  +  L  LD+  N +  +P ++G    L+ L LEGN
Sbjct: 520 IPNLETILISSN-QIGSIDPIQLKKMTKLSTLDLQNNDLLQIPPALGNCESLRALHLEGN 578

Query: 186 PLVSPPMDVVEQGLSAVKGYLSEKM 210
           P  +P   ++ +G  A+  YL  ++
Sbjct: 579 PFRNPRATILAKGTVAILEYLRSRI 603



 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 66/138 (47%), Gaps = 21/138 (15%)

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
           +E  +L  L +  NK+  L + ++ L +L VLD   N + SLP  +  L NL+ LNIS N
Sbjct: 79  WEQTDLTKLILASNKLQALSEDISLLPALVVLDIHDNQIASLPCAIRELTNLQKLNISHN 138

Query: 138 ---------------------FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRK 176
                                   LE LP SIG L  L ELDVS N + ++  S+G L  
Sbjct: 139 KIKQLPNELQHLQNLKSFLLQHNQLEELPDSIGHLSILEELDVSNNCLRSVSSSVGQLTG 198

Query: 177 LQKLSLEGNPLVSPPMDV 194
           L K +L  N L + P ++
Sbjct: 199 LVKFNLSSNKLTALPTEI 216


>gi|418698141|ref|ZP_13259120.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410762845|gb|EKR29004.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 447

 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 75/189 (39%), Positives = 108/189 (57%), Gaps = 10/189 (5%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTI---ENCRSLEELNAN 65
           RL N+  L ++   L  LP  I  L  L+ L +  N L+SLPK I    N RSL+ + AN
Sbjct: 252 RLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLD-IGAN 310

Query: 66  FNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
            N+   LP  I   L NL++L +N N+  I P+ +  L  L +L+   N L +LPE +  
Sbjct: 311 -NEFEVLPKEIA-RLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 368

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           L  L++L++S N   L TLP  IG L +L EL + YN+I TLP+ I  L+ L+KL+L  N
Sbjct: 369 LKGLQMLDLSHN--RLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYEN 426

Query: 186 PLVSPPMDV 194
           P+  PP ++
Sbjct: 427 PI--PPQEL 433



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/156 (37%), Positives = 84/156 (53%), Gaps = 3/156 (1%)

Query: 39  LDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQ 98
           +D+S       PK I     LE L    N++  LP  I  +L NLK L +N NK+ I+P+
Sbjct: 1   MDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREIN-KLKNLKELYLNGNKLTIVPK 59

Query: 99  SLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELD 158
            +  L +L +L    N + +LP+++E   NL+ LN+  N   L TLP  IG L  L EL+
Sbjct: 60  EIWELENLTILRLENNRISTLPKEIEKSKNLQELNLRGN--RLVTLPGEIGELKLLEELN 117

Query: 159 VSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           +  N+I  LP+ IG L  L   +L GN L S P ++
Sbjct: 118 LENNRIKILPNEIGALENLWIFNLSGNKLASIPKEI 153



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 92/176 (52%), Gaps = 3/176 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           +D+   +    P  I  L  L++L +  N +  LP+ I   ++L+EL  N NKL  +P  
Sbjct: 1   MDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKE 60

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           I +EL NL  L +  N+I  LP+ +    +L+ L+ R N L +LP ++       +  ++
Sbjct: 61  I-WELENLTILRLENNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIG--ELKLLEELN 117

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
                ++ LP  IG L +L   ++S NK+ ++P  IG L+ L+ L LE N L + P
Sbjct: 118 LENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLP 173



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 106/235 (45%), Gaps = 48/235 (20%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           +L N+  L ++ N+L  +P  I  L  L +L +  N + +LPK IE  ++L+ELN   N+
Sbjct: 40  KLKNLKELYLNGNKLTIVPKEIWELENLTILRLENNRISTLPKEIEKSKNLQELNLRGNR 99

Query: 69  LRQLPDTIGF----------------------ELINLKTLSINCNKIVILPQSLTHLTSL 106
           L  LP  IG                        L NL   +++ NK+  +P+ + +L +L
Sbjct: 100 LVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNL 159

Query: 107 RVLDARLNCLKSLPEDLENLINLEVLNI---------SQNFQYL---------------- 141
           R+L    N LK+LP  +E L +LEVLN+          +  Q L                
Sbjct: 160 RMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSEERKKIQALLPNCNIDLRDVEEGRT 219

Query: 142 -ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
              L  ++   + ++ L + Y + +  P  I  L+ L+ LSL    LV+ P ++V
Sbjct: 220 YRNLNLALEQPLKILSLSLEYQEFSLFPKEILRLKNLRSLSLYDTSLVALPKEIV 274



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 94/175 (53%), Gaps = 3/175 (1%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           +L +  N++  LP  I  L  LK L ++GN L  +PK I    +L  L    N++  LP 
Sbjct: 23  ILKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLENNRISTLPK 82

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            I  +  NL+ L++  N++V LP  +  L  L  L+   N +K LP ++  L NL + N+
Sbjct: 83  EIE-KSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNL 141

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
           S N   L ++P  IG L +L  L +  N++ TLP  +  L+ L+ L+L  NPL+S
Sbjct: 142 SGN--KLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLS 194



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 109/243 (44%), Gaps = 52/243 (21%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGN-LLESLPKTIE----NC 56
           IP+ +   L N+ +L + +NQLK LP  +  L  L+VL++  N LL    K I+    NC
Sbjct: 149 IPKEI-GNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSEERKKIQALLPNC 207

Query: 57  ----RSLEE-------------------LNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
               R +EE                   L+  + +    P  I   L NL++LS+    +
Sbjct: 208 NIDLRDVEEGRTYRNLNLALEQPLKILSLSLEYQEFSLFPKEI-LRLKNLRSLSLYDTSL 266

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY------------- 140
           V LP+ +  L  L  L   LN LKSLP+++  L NL  L+I  N ++             
Sbjct: 267 VALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNL 326

Query: 141 ---------LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
                     +  P  I  L  LV L+V+ N++  LP+ IG L+ LQ L L  N L + P
Sbjct: 327 RSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLP 386

Query: 192 MDV 194
            ++
Sbjct: 387 SEI 389



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 53/226 (23%)

Query: 22  QLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTI----G 77
           ++K LPN IG L  L + ++SGN L S+PK I N ++L  L    N+L+ LP  +     
Sbjct: 122 RIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQD 181

Query: 78  FELINL-------------KTLSINCN-----------------------KIV------- 94
            E++NL             + L  NCN                       KI+       
Sbjct: 182 LEVLNLLINPLLSEERKKIQALLPNCNIDLRDVEEGRTYRNLNLALEQPLKILSLSLEYQ 241

Query: 95  ---ILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLL 151
              + P+ +  L +LR L      L +LP+++  L +LE L++  N   L++LP  IGLL
Sbjct: 242 EFSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLN--QLKSLPKEIGLL 299

Query: 152 MSLVELDV-SYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
            +L  LD+ + N+   LP  I  L+ L+ L L  N     P ++ E
Sbjct: 300 RNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWE 345



 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 1/102 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ARL N+  L ++ N+ K  P  I  L KL +L+V+ N L++LP+ I   + L+ L+ + N
Sbjct: 321 ARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHN 380

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL 109
           +L  LP  IG +L NL  L +  N+I  LP+ +  L +LR L
Sbjct: 381 RLTTLPSEIG-QLHNLTELYLQYNRIKTLPEEIARLQNLRKL 421



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 3/94 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +V+L+V++NQL  LP  IG L  L++LD+S N L +LP  I    +L EL   +N+++ L
Sbjct: 349 LVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTL 408

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSL 106
           P+ I   L NL+ L++  N I   PQ L  +  L
Sbjct: 409 PEEIA-RLQNLRKLTLYENPIP--PQELDKIRKL 439


>gi|17227620|ref|NP_484168.1| hypothetical protein alr0124 [Nostoc sp. PCC 7120]
 gi|17135102|dbj|BAB77648.1| leucine-rich-repeat protein [Nostoc sp. PCC 7120]
          Length = 1119

 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 120/211 (56%), Gaps = 24/211 (11%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE+L A+L N+  L +  NQ+K +P +I  L+ L  L +SGN ++ +P+TI    +L +
Sbjct: 233 IPEAL-AKLTNLTQLILSDNQIKEIPETIAKLTNLTHLILSGNQIKEIPETIAKLTNLTQ 291

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+++++P+ I  +L NL  L ++ N+I  +P+++T LT+L  L    N +K +PE
Sbjct: 292 LGLDGNQIKEIPEAIA-KLTNLTQLGLDGNQIKEIPEAITKLTNLTHLILSGNQIKEIPE 350

Query: 122 DLENLINL--------------EVL----NISQNF---QYLETLPYSIGLLMSLVELDVS 160
            +  L NL              EVL    N++Q F     +  +P ++  L +L  L + 
Sbjct: 351 TIAKLTNLTQLALSSNQITEIPEVLAQLTNLTQLFLSSNQITQIPEALAPLTNLTTLHLR 410

Query: 161 YNKITTLPDSIGCLRKLQKLSLEGNPL-VSP 190
            N+IT +P++I  L KL+ L L GNPL +SP
Sbjct: 411 VNQITQIPEAIESLPKLELLDLRGNPLPISP 441



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 111/195 (56%), Gaps = 4/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE+L A+L N+  L +  NQ+  +P ++  L+ L  L++S N +  +P+ +    +L +
Sbjct: 118 IPEAL-AKLTNLTQLILSDNQITEIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQ 176

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN ++N++ ++P+ +  +L NL  L++  N+   +P++L  LT+L  L+   N    +PE
Sbjct: 177 LNLSYNQITEIPEALA-KLTNLTQLNLRGNQRTEIPEALAKLTNLTRLNLSYNQRTEIPE 235

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            L  L NL  L +S N   ++ +P +I  L +L  L +S N+I  +P++I  L  L +L 
Sbjct: 236 ALAKLTNLTQLILSDN--QIKEIPETIAKLTNLTHLILSGNQIKEIPETIAKLTNLTQLG 293

Query: 182 LEGNPLVSPPMDVVE 196
           L+GN +   P  + +
Sbjct: 294 LDGNQIKEIPEAIAK 308



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/190 (32%), Positives = 110/190 (57%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE+L A+L N+  L++  NQ   +P ++  L+ L  L +S N ++ +P+TI    +L  
Sbjct: 210 IPEAL-AKLTNLTRLNLSYNQRTEIPEALAKLTNLTQLILSDNQIKEIPETIAKLTNLTH 268

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N+++++P+TI  +L NL  L ++ N+I  +P+++  LT+L  L    N +K +PE
Sbjct: 269 LILSGNQIKEIPETIA-KLTNLTQLGLDGNQIKEIPEAIAKLTNLTQLGLDGNQIKEIPE 327

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L NL  L +S N   ++ +P +I  L +L +L +S N+IT +P+ +  L  L +L 
Sbjct: 328 AITKLTNLTHLILSGN--QIKEIPETIAKLTNLTQLALSSNQITEIPEVLAQLTNLTQLF 385

Query: 182 LEGNPLVSPP 191
           L  N +   P
Sbjct: 386 LSSNQITQIP 395



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 111/195 (56%), Gaps = 4/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE+L A+L N+  L++  NQ+  +P ++  L+ L  L++S N +  +P+ +    +L +
Sbjct: 141 IPEAL-AKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQ 199

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN   N+  ++P+ +  +L NL  L+++ N+   +P++L  LT+L  L    N +K +PE
Sbjct: 200 LNLRGNQRTEIPEALA-KLTNLTRLNLSYNQRTEIPEALAKLTNLTQLILSDNQIKEIPE 258

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L NL  L +S N   ++ +P +I  L +L +L +  N+I  +P++I  L  L +L 
Sbjct: 259 TIAKLTNLTHLILSGN--QIKEIPETIAKLTNLTQLGLDGNQIKEIPEAIAKLTNLTQLG 316

Query: 182 LEGNPLVSPPMDVVE 196
           L+GN +   P  + +
Sbjct: 317 LDGNQIKEIPEAITK 331



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 108/195 (55%), Gaps = 4/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE+L A+L N+  L++  NQ+  +P ++  L+ L  L++ GN    +P+ +    +L  
Sbjct: 164 IPEAL-AKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLRGNQRTEIPEALAKLTNLTR 222

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN ++N+  ++P+ +  +L NL  L ++ N+I  +P+++  LT+L  L    N +K +PE
Sbjct: 223 LNLSYNQRTEIPEALA-KLTNLTQLILSDNQIKEIPETIAKLTNLTHLILSGNQIKEIPE 281

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L NL  L +  N   ++ +P +I  L +L +L +  N+I  +P++I  L  L  L 
Sbjct: 282 TIAKLTNLTQLGLDGN--QIKEIPEAIAKLTNLTQLGLDGNQIKEIPEAITKLTNLTHLI 339

Query: 182 LEGNPLVSPPMDVVE 196
           L GN +   P  + +
Sbjct: 340 LSGNQIKEIPETIAK 354



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 100/175 (57%), Gaps = 3/175 (1%)

Query: 22  QLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELI 81
           QL  +P ++  L+ L  L +S N +  +P+ +    +L +LN ++N++ ++P+ +  +L 
Sbjct: 114 QLTEIPEALAKLTNLTQLILSDNQITEIPEALAKLTNLTQLNLSYNQITEIPEALA-KLT 172

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL  L+++ N+I  +P++L  LT+L  L+ R N    +PE L  L NL  LN+S N Q  
Sbjct: 173 NLTQLNLSYNQITEIPEALAKLTNLTQLNLRGNQRTEIPEALAKLTNLTRLNLSYN-QRT 231

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           E +P ++  L +L +L +S N+I  +P++I  L  L  L L GN +   P  + +
Sbjct: 232 E-IPEALAKLTNLTQLILSDNQIKEIPETIAKLTNLTHLILSGNQIKEIPETIAK 285



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 94/172 (54%), Gaps = 3/172 (1%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
            N LK LP  +  L  L+ LD+SGN LE +P  +     LEEL     +L ++P+ +  +
Sbjct: 66  GNNLKTLPIELLSLPNLRKLDISGNPLEGIPDVVMQILHLEELILIRVQLTEIPEALA-K 124

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL  L ++ N+I  +P++L  LT+L  L+   N +  +PE L  L NL  LN+S N  
Sbjct: 125 LTNLTQLILSDNQITEIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLSYN-- 182

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            +  +P ++  L +L +L++  N+ T +P+++  L  L +L+L  N     P
Sbjct: 183 QITEIPEALAKLTNLTQLNLRGNQRTEIPEALAKLTNLTRLNLSYNQRTEIP 234



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 102/194 (52%), Gaps = 21/194 (10%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVS------------------GNLLESLPKTIENCR 57
           LD+   +L  LP  IG L +L+ L +                   GN L++LP  + +  
Sbjct: 21  LDLSGQELTELPGEIGKLQQLESLILGKQVGGYEKVGYRIFQKALGNNLKTLPIELLSLP 80

Query: 58  SLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK 117
           +L +L+ + N L  +PD +  ++++L+ L +   ++  +P++L  LT+L  L    N + 
Sbjct: 81  NLRKLDISGNPLEGIPDVV-MQILHLEELILIRVQLTEIPEALAKLTNLTQLILSDNQIT 139

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
            +PE L  L NL  LN+S N   +  +P ++  L +L +L++SYN+IT +P+++  L  L
Sbjct: 140 EIPEALAKLTNLTQLNLSYN--QITEIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNL 197

Query: 178 QKLSLEGNPLVSPP 191
            +L+L GN     P
Sbjct: 198 TQLNLRGNQRTEIP 211



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 81/143 (56%), Gaps = 4/143 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE++T +L N+  L +  NQ+K +P +I  L+ L  L +S N +  +P+ +    +L +
Sbjct: 325 IPEAIT-KLTNLTHLILSGNQIKEIPETIAKLTNLTQLALSSNQITEIPEVLAQLTNLTQ 383

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L  + N++ Q+P+ +   L NL TL +  N+I  +P+++  L  L +LD R N L   PE
Sbjct: 384 LFLSSNQITQIPEALA-PLTNLTTLHLRVNQITQIPEAIESLPKLELLDLRGNPLPISPE 442

Query: 122 DLENLINLEVLNISQNFQYLETL 144
            L ++   +V ++ + F YL  L
Sbjct: 443 ILGSV--YQVGSVEEIFNYLRLL 463


>gi|359080498|ref|XP_003588007.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1-like
           [Bos taurus]
          Length = 1026

 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 119/250 (47%), Gaps = 44/250 (17%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P  L A L+++  LDV  N+L  LP+S   LS+L+ LDV  N L + P+ +    +LEE
Sbjct: 122 LPAQLGA-LVHLEELDVSFNRLAHLPDSFAGLSRLRTLDVDHNQLTAFPRQLLQLVALEE 180

Query: 62  LNANFNKLRQLPDTI---------------------GF-ELINLKTLSINCNKIVILPQS 99
           L+ + N+LR LP+ I                     GF EL +L++L ++ N +  LP  
Sbjct: 181 LDVSSNRLRGLPEDISALRALKILWLSGAELGTLPSGFCELASLESLMLDNNGLRALPAQ 240

Query: 100 LTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNF--------------------- 138
            + L  L++L+   N L+  P  L  L  LE L +S+N                      
Sbjct: 241 FSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPCLISGLGRLLTLWLDN 300

Query: 139 QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQG 198
             +  LP SI  L  L EL +  N+I  LPD+ G L ++    ++ NPL+ PP +V  +G
Sbjct: 301 NRIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKG 360

Query: 199 LSAVKGYLSE 208
           +  +  Y  E
Sbjct: 361 IPYIAAYQKE 370



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 100/185 (54%), Gaps = 4/185 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCL-PNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           +P+++     ++  LDV  N+L  L   ++G L +L+ L++S N L +LP  +     LE
Sbjct: 74  LPQAVAELGHHLTELDVSHNRLSVLGAEAVGALRELRKLNLSHNQLPALPAQLGALVHLE 133

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN+L  LPD+    L  L+TL ++ N++   P+ L  L +L  LD   N L+ LP
Sbjct: 134 ELDVSFNRLAHLPDSFA-GLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLP 192

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
           ED+  L  L++L +S     L TLP     L SL  L +  N +  LP     L++L+ L
Sbjct: 193 EDISALRALKILWLSG--AELGTLPSGFCELASLESLMLDNNGLRALPAQFSRLQRLKML 250

Query: 181 SLEGN 185
           +L  N
Sbjct: 251 NLSSN 255



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 80/146 (54%), Gaps = 8/146 (5%)

Query: 55  NCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLT----HLTSLRVLD 110
           N   +E LN   N L ++PD +G  L +L+ L +  N+   LPQ++     HLT L V  
Sbjct: 33  NIGDIEVLNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFAQLPQAVAELGHHLTELDVSH 92

Query: 111 ARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDS 170
            RL+ L +  E +  L  L  LN+S N   L  LP  +G L+ L ELDVS+N++  LPDS
Sbjct: 93  NRLSVLGA--EAVGALRELRKLNLSHN--QLPALPAQLGALVHLEELDVSFNRLAHLPDS 148

Query: 171 IGCLRKLQKLSLEGNPLVSPPMDVVE 196
              L +L+ L ++ N L + P  +++
Sbjct: 149 FAGLSRLRTLDVDHNQLTAFPRQLLQ 174


>gi|428182313|gb|EKX51174.1| hypothetical protein GUITHDRAFT_66212 [Guillardia theta CCMP2712]
          Length = 556

 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 112/196 (57%), Gaps = 27/196 (13%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+P+SL+    ++V+L V  N+++ L + I  LS L VL++  NLL+ LP+++E  RSL 
Sbjct: 351 MLPDSLSELFTDLVLLSVAHNKVESLTDRISVLSNLTVLELEDNLLQHLPQSLEGNRSLV 410

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHL-TSLRVLDARLNCLKSL 119
           +L  N N+ +  P+ I F+L  L+ L++  N+I ++P++L    T+L++L  + N + +L
Sbjct: 411 KLTLNRNQFQSFPEVI-FDLSGLQILNLALNQIELVPEALCEANTALKLLALQHNQIHAL 469

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P +                         IGL+ +L+ LD++ N I +LP SI   ++L+ 
Sbjct: 470 PSN-------------------------IGLMANLILLDLTQNHIISLPSSISACQRLRA 504

Query: 180 LSLEGNPLVSPPMDVV 195
           L L GNPL S P DV+
Sbjct: 505 LFLSGNPLPSFPRDVL 520



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 95/175 (54%), Gaps = 3/175 (1%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +  L +  N++  LP  IG L++L+ LD+S NL+ SLP  I    S+++L+ +FN L  L
Sbjct: 14  ITRLSLSYNRVSTLPAGIGSLTQLQSLDLSHNLITSLPPQIGQLTSMKQLDLSFNMLDSL 73

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P  +   L +   L ++ N++  LP S++ L+SL   D     L+++P DL    ++ V+
Sbjct: 74  PKEMS-SLPDWSKLLLSHNRLSTLPPSISRLSSLTHADLSDFGLQAVPPDLLENSSIRVV 132

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            +  N   + +LP S+    SLVEL +  N+I  LP SIG    L  L L  N L
Sbjct: 133 LLGHN--QISSLPPSVQTWTSLVELCLQGNRINRLPASIGFCTALTSLDLRHNRL 185



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 102/208 (49%), Gaps = 28/208 (13%)

Query: 3   PESLTARLLN-VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           PE    R LN +++L  H N +K LP  +  L++L+ L V  N+LE LP  +    SL E
Sbjct: 190 PEMGRMRALNKLLLLGQHHNSIKDLPTDLDRLTRLRSLRVDHNILEMLPPGLRFLTSLTE 249

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQS------LTHLT----------- 104
           L AN N L ++   IG   ++L  L+++ NK+V LP +      LT LT           
Sbjct: 250 LLANDNMLEEVCPEIG-ACVHLTRLNLHANKLVTLPHTIGNCSLLTQLTIHQNKIKLPEE 308

Query: 105 --SLRVLDARL----NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIG-LLMSLVEL 157
                +LD       N L  +PE + NL+ L  L +S N   L  LP S+  L   LV L
Sbjct: 309 IGHFTLLDELFSICDNELVEIPESVGNLVRLRSLRLSGN--NLTMLPDSLSELFTDLVLL 366

Query: 158 DVSYNKITTLPDSIGCLRKLQKLSLEGN 185
            V++NK+ +L D I  L  L  L LE N
Sbjct: 367 SVAHNKVESLTDRISVLSNLTVLELEDN 394



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 89/179 (49%), Gaps = 5/179 (2%)

Query: 14  VVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLP 73
           VVL  H NQ+  LP S+   + L  L + GN +  LP +I  C +L  L+   N+LR+LP
Sbjct: 131 VVLLGH-NQISSLPPSVQTWTSLVELCLQGNRINRLPASIGFCTALTSLDLRHNRLRRLP 189

Query: 74  DTIG--FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
             +G    L  L  L  + N I  LP  L  LT LR L    N L+ LP  L  L +L  
Sbjct: 190 PEMGRMRALNKLLLLGQHHNSIKDLPTDLDRLTRLRSLRVDHNILEMLPPGLRFLTSLTE 249

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
           L  + N   LE +   IG  + L  L++  NK+ TLP +IG    L +L++  N +  P
Sbjct: 250 LLANDNM--LEEVCPEIGACVHLTRLNLHANKLVTLPHTIGNCSLLTQLTIHQNKIKLP 306



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 7/196 (3%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P S+ +RL ++   D+    L+ +P  +   S ++V+ +  N + SLP +++   SL E
Sbjct: 96  LPPSI-SRLSSLTHADLSDFGLQAVPPDLLENSSIRVVLLGHNQISSLPPSVQTWTSLVE 154

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR---VLDARLNCLKS 118
           L    N++ +LP +IGF    L +L +  N++  LP  +  + +L    +L    N +K 
Sbjct: 155 LCLQGNRINRLPASIGF-CTALTSLDLRHNRLRRLPPEMGRMRALNKLLLLGQHHNSIKD 213

Query: 119 LPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQ 178
           LP DL+ L  L  L +  N   LE LP  +  L SL EL  + N +  +   IG    L 
Sbjct: 214 LPTDLDRLTRLRSLRVDHNI--LEMLPPGLRFLTSLTELLANDNMLEEVCPEIGACVHLT 271

Query: 179 KLSLEGNPLVSPPMDV 194
           +L+L  N LV+ P  +
Sbjct: 272 RLNLHANKLVTLPHTI 287



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 4/139 (2%)

Query: 86  LSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLP 145
           LS++ N++  LP  +  LT L+ LD   N + SLP  +  L +++ L++S  F  L++LP
Sbjct: 17  LSLSYNRVSTLPAGIGSLTQLQSLDLSHNLITSLPPQIGQLTSMKQLDLS--FNMLDSLP 74

Query: 146 YSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGY 205
             +  L    +L +S+N+++TLP SI  L  L    L    L + P D++E   S+++  
Sbjct: 75  KEMSSLPDWSKLLLSHNRLSTLPPSISRLSSLTHADLSDFGLQAVPPDLLEN--SSIRVV 132

Query: 206 LSEKMNNDHKSPKKKSWVG 224
           L          P  ++W  
Sbjct: 133 LLGHNQISSLPPSVQTWTS 151



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 38/64 (59%)

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
           +  +S ++  + TLP  IG L  L  LD+S+N IT+LP  IG L  +++L L  N L S 
Sbjct: 14  ITRLSLSYNRVSTLPAGIGSLTQLQSLDLSHNLITSLPPQIGQLTSMKQLDLSFNMLDSL 73

Query: 191 PMDV 194
           P ++
Sbjct: 74  PKEM 77


>gi|418755269|ref|ZP_13311476.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           MOR084]
 gi|409964280|gb|EKO32170.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           MOR084]
          Length = 199

 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 103/179 (57%), Gaps = 3/179 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L ++ NQL  LP  IG L  L+ L ++ N L +LP  I N ++L+ LN + N
Sbjct: 3   GNLQNLQELYLNENQLTALPKEIGKLQNLQKLVLNRNQLTTLPIEIGNLQNLQGLNLDKN 62

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP  I  +L NL+ L +  NK+  LP  + +L  L+ L    N L ++P+++ NL 
Sbjct: 63  QLTTLPKEI-RKLQNLQGLHLGNNKLTALPIEIENLQKLQWLGLNKNQLTTIPKEIGNLQ 121

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNP 186
           NL+ LN+S N   L T+P  I  L  L  LD+  N++TTLP  IG L+ LQ L L GNP
Sbjct: 122 NLKELNLSSN--QLTTIPKEIENLQKLETLDLYNNQLTTLPKEIGKLQNLQDLYLGGNP 178



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 63/166 (37%), Positives = 101/166 (60%), Gaps = 3/166 (1%)

Query: 29  SIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSI 88
            IG L  L+ L ++ N L +LPK I   ++L++L  N N+L  LP  IG  L NL+ L++
Sbjct: 1   EIGNLQNLQELYLNENQLTALPKEIGKLQNLQKLVLNRNQLTTLPIEIG-NLQNLQGLNL 59

Query: 89  NCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSI 148
           + N++  LP+ +  L +L+ L    N L +LP ++ENL  L+ L +++N   L T+P  I
Sbjct: 60  DKNQLTTLPKEIRKLQNLQGLHLGNNKLTALPIEIENLQKLQWLGLNKN--QLTTIPKEI 117

Query: 149 GLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           G L +L EL++S N++TT+P  I  L+KL+ L L  N L + P ++
Sbjct: 118 GNLQNLKELNLSSNQLTTIPKEIENLQKLETLDLYNNQLTTLPKEI 163



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 1/80 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L ++ NQL  +P  IG L  LK L++S N L ++PK IEN + LE L+   N+L  LP  
Sbjct: 103 LGLNKNQLTTIPKEIGNLQNLKELNLSSNQLTTIPKEIENLQKLETLDLYNNQLTTLPKE 162

Query: 76  IGFELINLKTLSINCNKIVI 95
           IG +L NL+ L +  N  +I
Sbjct: 163 IG-KLQNLQDLYLGGNPSLI 181


>gi|308499138|ref|XP_003111755.1| hypothetical protein CRE_03127 [Caenorhabditis remanei]
 gi|308239664|gb|EFO83616.1| hypothetical protein CRE_03127 [Caenorhabditis remanei]
          Length = 379

 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 76/196 (38%), Positives = 104/196 (53%), Gaps = 6/196 (3%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           NV +LDV  N L  LP  IG L+ L  L    NLLE LPK ++  +++E L  + N+L  
Sbjct: 88  NVSMLDVSFNSLSSLPEEIGSLTSLTTLIARNNLLEHLPKGMQLLQNMEHLYLSGNRLEY 147

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           +P  I   +  LKTL +  N I   P +++ L SL VL    N L+ +P  +  L  LE 
Sbjct: 148 VPPVI-LTMRKLKTLHLGGNYIDSCPSNISVLASLTVLYFGGNRLREIPASIGCLDQLEN 206

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP- 190
           L +  N   LET+P ++G L  L  L +  NK+ TLP  I  LR+LQ+LSL  NPLV   
Sbjct: 207 LGLCDNI--LETIPSTLGDLHYLETLSLHNNKLRTLPTDILNLRRLQQLSLRNNPLVHSF 264

Query: 191 --PMDVVEQGLSAVKG 204
              MD+    L  + G
Sbjct: 265 VHNMDLAPPSLKELSG 280



 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 1/128 (0%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+  L +  N+L+ +P  I  + KLK L + GN ++S P  I    SL  L    N+L
Sbjct: 132 LQNMEHLYLSGNRLEYVPPVILTMRKLKTLHLGGNYIDSCPSNISVLASLTVLYFGGNRL 191

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
           R++P +IG  L  L+ L +  N +  +P +L  L  L  L    N L++LP D+ NL  L
Sbjct: 192 REIPASIGC-LDQLENLGLCDNILETIPSTLGDLHYLETLSLHNNKLRTLPTDILNLRRL 250

Query: 130 EVLNISQN 137
           + L++  N
Sbjct: 251 QQLSLRNN 258



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 1/85 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L ++ VL    N+L+ +P SIGCL +L+ L +  N+LE++P T+ +   LE L+ + NKL
Sbjct: 178 LASLTVLYFGGNRLREIPASIGCLDQLENLGLCDNILETIPSTLGDLHYLETLSLHNNKL 237

Query: 70  RQLPDTIGFELINLKTLSINCNKIV 94
           R LP  I   L  L+ LS+  N +V
Sbjct: 238 RTLPTDI-LNLRRLQQLSLRNNPLV 261


>gi|410909357|ref|XP_003968157.1| PREDICTED: protein scribble homolog [Takifugu rubripes]
          Length = 1701

 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 65/170 (38%), Positives = 103/170 (60%), Gaps = 5/170 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LD+S N +  +P++I+ CR+LE  + + N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCRALEIADFSGNP 116

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L  L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 117 LSRLPD--GFTQLRTLAHLALNDVSLQTLPNDIGNLANLVTLELRENLLKSLPTSLSFLV 174

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
            LE L++  N   LE LP ++G L +L EL +  N+++TLP+ +G LR+L
Sbjct: 175 KLEQLDLGSN--ELEDLPDTLGALPNLRELWLDRNQLSTLPEELGNLRRL 222



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/191 (39%), Positives = 108/191 (56%), Gaps = 4/191 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L  +  L ++   L+ LPN IG L+ L  L++  NLL+SLP ++     LE+
Sbjct: 120 LPDGFT-QLRTLAHLALNDVSLQTLPNDIGNLANLVTLELRENLLKSLPTSLSFLVKLEQ 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+L  LPDT+G  L NL+ L ++ N++  LP+ L +L  L  LD   N L+ LP 
Sbjct: 179 LDLGSNELEDLPDTLGA-LPNLRELWLDRNQLSTLPEELGNLRRLVCLDVSENRLEELPS 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L+ L  L ++QN   LE +P SIG L  L  L V  N++T L DSIG    L +L 
Sbjct: 238 ELNGLLALTDLLLTQNL--LEFVPDSIGSLKQLSILKVDQNRMTNLTDSIGECENLTELV 295

Query: 182 LEGNPLVSPPM 192
           L  N L S P 
Sbjct: 296 LTENLLQSLPQ 306



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 96/201 (47%), Gaps = 26/201 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LD+  N +  +P SI     L++ D SGN L  LP      R+L  L  N  
Sbjct: 79  ANFMQLVELDISRNDIPEIPESIKFCRALEIADFSGNPLSRLPDGFTQLRTLAHLALNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP+ IG  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 139 SLQTLPNDIG-NLANLVTLELRENLLKSLPTSLSFLVKLEQLDLGSNELEDLPDTLGALP 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL-------------------- 167
           NL  L + +N   L TLP  +G L  LV LDVS N++  L                    
Sbjct: 198 NLRELWLDRN--QLSTLPEELGNLRRLVCLDVSENRLEELPSELNGLLALTDLLLTQNLL 255

Query: 168 ---PDSIGCLRKLQKLSLEGN 185
              PDSIG L++L  L ++ N
Sbjct: 256 EFVPDSIGSLKQLSILKVDQN 276



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 104/187 (55%), Gaps = 5/187 (2%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           +R L  ++LD  +NQLK LP     L  L+ L +S N ++ LP  + N   L EL+ + N
Sbjct: 35  SRSLEELLLD--ANQLKELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDISRN 92

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            + ++P++I F    L+    + N +  LP   T L +L  L      L++LP D+ NL 
Sbjct: 93  DIPEIPESIKF-CRALEIADFSGNPLSRLPDGFTQLRTLAHLALNDVSLQTLPNDIGNLA 151

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           NL  L + +N   L++LP S+  L+ L +LD+  N++  LPD++G L  L++L L+ N L
Sbjct: 152 NLVTLELRENL--LKSLPTSLSFLVKLEQLDLGSNELEDLPDTLGALPNLRELWLDRNQL 209

Query: 188 VSPPMDV 194
            + P ++
Sbjct: 210 STLPEEL 216



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 104/185 (56%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+  N LE LP T+    +L EL  + N+L
Sbjct: 150 LANLVTLELRENLLKSLPTSLSFLVKLEQLDLGSNELEDLPDTLGALPNLRELWLDRNQL 209

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP+ +G  L  L  L ++ N++  LP  L  L +L  L    N L+ +P+ + +L  L
Sbjct: 210 STLPEELG-NLRRLVCLDVSENRLEELPSELNGLLALTDLLLTQNLLEFVPDSIGSLKQL 268

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
            +L + QN   +  L  SIG   +L EL ++ N + +LP S+G L+KL  L+++ N L S
Sbjct: 269 SILKVDQN--RMTNLTDSIGECENLTELVLTENLLQSLPQSLGKLKKLTNLNVDRNRLSS 326

Query: 190 PPMDV 194
            P ++
Sbjct: 327 VPKEL 331



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 78/137 (56%), Gaps = 3/137 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +P+S+ + L  + +L V  N++  L +SIG    L  L ++ NLL+SLP+++   + L 
Sbjct: 257 FVPDSIGS-LKQLSILKVDQNRMTNLTDSIGECENLTELVLTENLLQSLPQSLGKLKKLT 315

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            LN + N+L  +P  +G    +L  LS+  N++  LP  L   T L VLD   N L++LP
Sbjct: 316 NLNVDRNRLSSVPKELGG-CSSLNVLSLRDNRLGKLPAELADATELHVLDVAGNRLQNLP 374

Query: 121 EDLENLINLEVLNISQN 137
             L NL NL+ + +++N
Sbjct: 375 FSLTNL-NLKAMWLAEN 390



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 81/173 (46%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           LKC+P    C   ++ +D     L ++P  I    RSLEEL  + N+L++LP    F L+
Sbjct: 2   LKCIP-LWRCNRHVESVDKRHCNLHTVPDEIFRYSRSLEELLLDANQLKELPKPF-FRLL 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I                       + LP ++ N + L  L+IS+N   +
Sbjct: 60  NLRKLGLSDNEI-----------------------QRLPPEVANFMQLVELDISRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P SI    +L   D S N ++ LPD    LR L  L+L    L + P D+
Sbjct: 95  PEIPESIKFCRALEIADFSGNPLSRLPDGFTQLRTLAHLALNDVSLQTLPNDI 147


>gi|124004944|ref|ZP_01689787.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123989622|gb|EAY29168.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 384

 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 74/176 (42%), Positives = 102/176 (57%), Gaps = 4/176 (2%)

Query: 19  HSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGF 78
           H N L  LP  I  L  LKVL++S N L +LP  I   R LEELN   N+L +LPD +  
Sbjct: 155 HFN-LTRLPKEICLLKGLKVLNLSDNQLTNLPAEITELRDLEELNLRNNQLTELPDKV-I 212

Query: 79  ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNF 138
           EL NL+ L +  N++V LP  +  L SL+ L    N L++LP ++  L++L  L +  N 
Sbjct: 213 ELTNLRELWLGTNQLVGLPPEIGQLFSLQNLYLYDNQLENLPLEVGQLVSLRNLYLDNN- 271

Query: 139 QYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             L TLP  IG L +L EL +SYN++ TLP  IG L +L+ L L+ N L   P ++
Sbjct: 272 -ELLTLPAEIGNLTNLRELVLSYNRLITLPIRIGELAQLEVLYLQNNQLKRLPEEI 326



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 4/205 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P  +T  L ++  L++ +NQL  LP+ +  L+ L+ L +  N L  LP  I    SL+ 
Sbjct: 184 LPAEIT-ELRDLEELNLRNNQLTELPDKVIELTNLRELWLGTNQLVGLPPEIGQLFSLQN 242

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N+L  LP  +G +L++L+ L ++ N+++ LP  + +LT+LR L    N L +LP 
Sbjct: 243 LYLYDNQLENLPLEVG-QLVSLRNLYLDNNELLTLPAEIGNLTNLRELVLSYNRLITLPI 301

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L  LEVL +  N   L+ LP  IGLL +L EL +  N+IT LP+ I  L +L+ L 
Sbjct: 302 RIGELAQLEVLYLQNN--QLKRLPEEIGLLQNLEELYIENNRITHLPEEIAQLSQLKYLY 359

Query: 182 LEGNPLVSPPMDVVEQGLSAVKGYL 206
            + N   S   + + + L + + Y 
Sbjct: 360 AQNNMFSSGEKEKIRELLPSTEIYF 384



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 108/206 (52%), Gaps = 6/206 (2%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           VL++  NQL  LP  I  L  L+ L++  N L  LP  +    +L EL    N+L  LP 
Sbjct: 173 VLNLSDNQLTNLPAEITELRDLEELNLRNNQLTELPDKVIELTNLRELWLGTNQLVGLPP 232

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
            IG +L +L+ L +  N++  LP  +  L SLR L    N L +LP ++ NL NL  L +
Sbjct: 233 EIG-QLFSLQNLYLYDNQLENLPLEVGQLVSLRNLYLDNNELLTLPAEIGNLTNLRELVL 291

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           S N   L TLP  IG L  L  L +  N++  LP+ IG L+ L++L +E N +   P ++
Sbjct: 292 SYN--RLITLPIRIGELAQLEVLYLQNNQLKRLPEEIGLLQNLEELYIENNRITHLPEEI 349

Query: 195 VEQGLSAVKGYLSEKMNNDHKSPKKK 220
            +  LS +K YL  + N      K+K
Sbjct: 350 AQ--LSQLK-YLYAQNNMFSSGEKEK 372


>gi|354491100|ref|XP_003507694.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog, partial
           [Cricetulus griseus]
          Length = 1656

 Score = 97.1 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 109/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 54  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 113

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 114 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLITLELRENLLKSLPASLSFLV 171

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 172 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 229

Query: 188 VSPPMD 193
              P++
Sbjct: 230 EELPVE 235



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 7/192 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   L
Sbjct: 24  VPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQL 81

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP   T L SL  L      L++L
Sbjct: 82  VELDVSRNDIPEIPESIKF-CKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 140

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L++
Sbjct: 141 PGDVGNLANLITLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRE 198

Query: 180 LSLEGNPLVSPP 191
           L L+ N L + P
Sbjct: 199 LWLDRNQLSALP 210



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 70/183 (38%), Positives = 100/183 (54%), Gaps = 4/183 (2%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N++ L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 147 LANLITLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 206

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LPE +  L  L
Sbjct: 207 SALPPELG-NLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL 265

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL-V 188
            +L + QN   L  +  +IG   +L EL ++ N +T LP S+G L KL  L+++ N L V
Sbjct: 266 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVDRNHLEV 323

Query: 189 SPP 191
            PP
Sbjct: 324 LPP 326



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 76  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 135

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 136 SLQALPGDVG-NLANLITLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 194

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 195 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 233



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 117 LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLITLELRENLLKSLPASLSFLVKLEQ 175

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 176 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPV 234

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L  L  L +SQN   L+ LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 235 ELGGLALLTDLLLSQNL--LQRLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 292

Query: 182 LEGNPLVSPP 191
           L  N L + P
Sbjct: 293 LTENLLTALP 302



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 185 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLT 243

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N L++LP+ IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 244 DLLLSQNLLQRLPEGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALP 302

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N  +LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 303 RSLGKLTKLTNLNVDRN--HLEVLPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVL 360

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 361 DVAGNRLRSLPFALTHLNLKAL 382



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 48/136 (35%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP+++     L  
Sbjct: 255 LPEGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTN 313

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N L  LP  IG   + L  LS+  N++ +LP  L H   L VLD   N L+SLP 
Sbjct: 314 LNVDRNHLEVLPPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPF 372

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 373 ALTHL-NLKALWLAEN 387



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 27/150 (18%)

Query: 46  LESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLT 104
           L+++P+ I    RSLEEL  + N+LR+LP    F L+NL+ L ++ N+I           
Sbjct: 21  LQAVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLLNLRKLGLSDNEI----------- 68

Query: 105 SLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                       + LP ++ N + L  L++S+N   +  +P SI    +L   D S N +
Sbjct: 69  ------------QRLPPEVANFMQLVELDVSRN--DIPEIPESIKFCKALEIADFSGNPL 114

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           + LPD    LR L  L+L    L + P DV
Sbjct: 115 SRLPDGFTQLRSLAHLALNDVSLQALPGDV 144


>gi|427795749|gb|JAA63326.1| Putative leucine rich repeat protein, partial [Rhipicephalus
           pulchellus]
          Length = 463

 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 68/190 (35%), Positives = 108/190 (56%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE  T +LLN+  L ++   L+ LP + G LSKLK+L++  N L+ LPK++     L  
Sbjct: 119 LPEGFT-QLLNIEQLYLNDTFLEYLPANFGRLSKLKILELRENHLKVLPKSMARLTELSR 177

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N   +LP+ IG  L +L  L  + N++  LP  + HL  L  LDA  N +  + +
Sbjct: 178 LDIGQNDFTELPEVIG-SLPSLTELWCDSNRLTSLPSYMGHLIKLTYLDASRNRISFIAD 236

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           ++EN+  L  L ++ N   L+ +P ++G L +L  L +  N + TLPDSIG L KL++L 
Sbjct: 237 EIENMTMLSDLTLTTN--KLQKIPETLGFLQNLTTLRLDDNHLATLPDSIGQLSKLEELI 294

Query: 182 LEGNPLVSPP 191
           +  N + S P
Sbjct: 295 INSNEIDSLP 304



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 96/179 (53%), Gaps = 3/179 (1%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN+L  LP+ +G L KL  LD S N +  +   IEN   L +L    NKL+++P+T+GF 
Sbjct: 205 SNRLTSLPSYMGHLIKLTYLDASRNRISFIADEIENMTMLSDLTLTTNKLQKIPETLGF- 263

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L NL TL ++ N +  LP S+  L+ L  L    N + SLP  +  L NL +L    N  
Sbjct: 264 LQNLTTLRLDDNHLATLPDSIGQLSKLEELIINSNEIDSLPSTIGLLRNLTLLMADDNL- 322

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQG 198
            LE LP  IG    L  L +  N++  +PD +G L  L+ ++L GN L   P+ + + G
Sbjct: 323 -LEDLPPEIGSCSKLRVLSLRDNRLCNVPDELGHLSSLRVVNLSGNQLRHLPVSLAKLG 380



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/136 (42%), Positives = 79/136 (58%), Gaps = 2/136 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE+L   L N+  L +  N L  LP+SIG LSKL+ L ++ N ++SLP TI   R+L  
Sbjct: 257 IPETL-GFLQNLTTLRLDDNHLATLPDSIGQLSKLEELIINSNEIDSLPSTIGLLRNLTL 315

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L A+ N L  LP  IG     L+ LS+  N++  +P  L HL+SLRV++   N L+ LP 
Sbjct: 316 LMADDNLLEDLPPEIG-SCSKLRVLSLRDNRLCNVPDELGHLSSLRVVNLSGNQLRHLPV 374

Query: 122 DLENLINLEVLNISQN 137
            L  L  L  L +SQN
Sbjct: 375 SLAKLGGLHALWLSQN 390



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 100/190 (52%), Gaps = 24/190 (12%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTI- 76
           +++NQ+K LP  +     L+ L++S N +++LP  + +  SLEEL+ + N + ++PD I 
Sbjct: 42  LNANQIKDLPRPLFHCHGLRKLNLSDNDIQTLPPALSSLISLEELDISKNNVIEIPDNIK 101

Query: 77  --------------------GF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNC 115
                               GF +L+N++ L +N   +  LP +   L+ L++L+ R N 
Sbjct: 102 GCKCLSIVEASVNPVGKLPEGFTQLLNIEQLYLNDTFLEYLPANFGRLSKLKILELRENH 161

Query: 116 LKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLR 175
           LK LP+ +  L  L  L+I QN  + E LP  IG L SL EL    N++T+LP  +G L 
Sbjct: 162 LKVLPKSMARLTELSRLDIGQN-DFTE-LPEVIGSLPSLTELWCDSNRLTSLPSYMGHLI 219

Query: 176 KLQKLSLEGN 185
           KL  L    N
Sbjct: 220 KLTYLDASRN 229



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 100/201 (49%), Gaps = 23/201 (11%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V VLD   + L+ +P+ +    + L+ L ++ N ++ LP+ + +C  L +LN + N ++ 
Sbjct: 13  VRVLDYAHHGLEDVPSEVFNYERTLEELYLNANQIKDLPRPLFHCHGLRKLNLSDNDIQT 72

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP  +   LI+L+ L I+ N ++ +P ++     L +++A +N +  LPE    L+N+E 
Sbjct: 73  LPPALS-SLISLEELDISKNNVIEIPDNIKGCKCLSIVEASVNPVGKLPEGFTQLLNIEQ 131

Query: 132 LNISQNF---------------------QYLETLPYSIGLLMSLVELDVSYNKITTLPDS 170
           L ++  F                      +L+ LP S+  L  L  LD+  N  T LP+ 
Sbjct: 132 LYLNDTFLEYLPANFGRLSKLKILELRENHLKVLPKSMARLTELSRLDIGQNDFTELPEV 191

Query: 171 IGCLRKLQKLSLEGNPLVSPP 191
           IG L  L +L  + N L S P
Sbjct: 192 IGSLPSLTELWCDSNRLTSLP 212



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/152 (36%), Positives = 83/152 (54%), Gaps = 3/152 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L + +N+L+ +P ++G L  L  L +  N L +LP +I     LEEL  N N++  LP T
Sbjct: 247 LTLTTNKLQKIPETLGFLQNLTTLRLDDNHLATLPDSIGQLSKLEELIINSNEIDSLPST 306

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG  L NL  L  + N +  LP  +   + LRVL  R N L ++P++L +L +L V+N+S
Sbjct: 307 IGL-LRNLTLLMADDNLLEDLPPEIGSCSKLRVLSLRDNRLCNVPDELGHLSSLRVVNLS 365

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
            N   L  LP S+  L  L  L +S N+   L
Sbjct: 366 GN--QLRHLPVSLAKLGGLHALWLSQNQTKPL 395


>gi|428173352|gb|EKX42255.1| hypothetical protein GUITHDRAFT_74163 [Guillardia theta CCMP2712]
          Length = 643

 Score = 97.1 bits (240), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 97/184 (52%), Gaps = 3/184 (1%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+ +LDV SN L      +  + +L VL+ + N    LP  I    +L EL+   N++R 
Sbjct: 132 NLKILDVSSNHLTSFDTVLTDIPQLVVLNFAKNAATELPVEIAKMTNLRELSVQGNQIRS 191

Query: 72  LPDTIG-FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
           +PD    F+L NL+ L +  N++  LP S++  T+LR LD   N L   P D+  L  L+
Sbjct: 192 IPDIAALFQLTNLEVLYLRYNQVTFLPGSISKFTNLRELDCAYNSLVDTPPDIRELKRLK 251

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
            ++ S N   L  +P  IG L  +  LD+SYN++  LP  +G +  LQ L    N +V  
Sbjct: 252 RIDFSHN--SLRGIPPDIGTLEEVEYLDLSYNQLQELPREVGFMTSLQSLDFSNNQIVFL 309

Query: 191 PMDV 194
           P+++
Sbjct: 310 PVEL 313



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/197 (37%), Positives = 113/197 (57%), Gaps = 7/197 (3%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
            +P S+ ++  N+  LD   N L   P  I  L +LK +D S N L  +P  I     +E
Sbjct: 216 FLPGSI-SKFTNLRELDCAYNSLVDTPPDIRELKRLKRIDFSHNSLRGIPPDIGTLEEVE 274

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHL-TSLRVLDARLNCLK-- 117
            L+ ++N+L++LP  +GF + +L++L  + N+IV LP  L  L TSL +L A  N +   
Sbjct: 275 YLDLSYNQLQELPREVGF-MTSLQSLDFSNNQIVFLPVELEALETSLTLLSADNNAITDP 333

Query: 118 SLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKL 177
           +LP +L NL NLE  ++S N   L  LP SI  L SLV  +V+ N++TT+P  +  L+ L
Sbjct: 334 TLPVELGNLRNLERFDLSSNL--LSRLPSSIKRLESLVYFNVNSNRLTTIPPEVKGLKSL 391

Query: 178 QKLSLEGNPLVSPPMDV 194
            +L L+ N L+S P ++
Sbjct: 392 IELHLKDNLLISMPPEI 408



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 99/207 (47%), Gaps = 28/207 (13%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L +  N+L  LP SIG L+ L+V+ +  N L+ +P  IENC SL  ++ + N LR+LP  
Sbjct: 42  LKLGKNRLIALPPSIGNLTNLQVISLEENKLKEIPSQIENCGSLRTIDVSHNNLRRLPIP 101

Query: 76  IGFELIN-LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
                +  LK L +  N+I  +P +++ L +L++LD   N L S    L ++  L VLN 
Sbjct: 102 RKISRLKLLKELRVAHNQIDSIPYTMSLLNNLKILDVSSNHLTSFDTVLTDIPQLVVLNF 161

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVS-------------------------YNKITTLPD 169
           ++N      LP  I  + +L EL V                          YN++T LP 
Sbjct: 162 AKNAA--TELPVEIAKMTNLRELSVQGNQIRSIPDIAALFQLTNLEVLYLRYNQVTFLPG 219

Query: 170 SIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           SI     L++L    N LV  P D+ E
Sbjct: 220 SISKFTNLRELDCAYNSLVDTPPDIRE 246



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 14/213 (6%)

Query: 21  NQLKCLPNS-IGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           NQ   +P + I  L  L+ L+   N L S+  +I     L  L+   N LR LP  +G  
Sbjct: 422 NQFMSIPTTMIFQLFTLEKLEAGDNRLRSVSPSISQLSCLTLLSLKNNNLRVLPRELG-R 480

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
              LKTLS+N N I+ +P  L  L  LR L    N L  LP+ +  L+NL  L    N  
Sbjct: 481 CTGLKTLSLNANDIIAIPDQLCGLARLRRLTLDKNGLCFLPDTIGCLVNLRSLRFRDNL- 539

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL-----VSPPMDV 194
            +  LP S   L SL ELD+S NK T +P S+  L  L +L    NP+      S   D 
Sbjct: 540 -IMRLPPSFSSLTSLRELDMSKNKFTNIPQSLLDLTGLTRLRCGHNPIPYSLSTSWIEDD 598

Query: 195 VEQGLS-----AVKGYLSEKMNNDHKSPKKKSW 222
           V + L+      +   +S   NN++++   ++W
Sbjct: 599 VRKFLTNYTYETIGKRISAMWNNNNRAEVFRAW 631



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 80/144 (55%), Gaps = 1/144 (0%)

Query: 46  LESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTS 105
           L   P  I +   L  ++A  N++++LP  +G  L  L++L +  N+++ LP S+ +LT+
Sbjct: 3   LTVFPGLICDIFILSNISATKNEIKELPAEVGL-LTALQSLKLGKNRLIALPPSIGNLTN 61

Query: 106 LRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
           L+V+    N LK +P  +EN  +L  +++S N      +P  I  L  L EL V++N+I 
Sbjct: 62  LQVISLEENKLKEIPSQIENCGSLRTIDVSHNNLRRLPIPRKISRLKLLKELRVAHNQID 121

Query: 166 TLPDSIGCLRKLQKLSLEGNPLVS 189
           ++P ++  L  L+ L +  N L S
Sbjct: 122 SIPYTMSLLNNLKILDVSSNHLTS 145



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 77/147 (52%), Gaps = 8/147 (5%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           + +L + +N L+ LP  +G  + LK L ++ N + ++P  +     L  L  + N L  L
Sbjct: 461 LTLLSLKNNNLRVLPRELGRCTGLKTLSLNANDIIAIPDQLCGLARLRRLTLDKNGLCFL 520

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           PDTIG  L+NL++L    N I+ LP S + LTSLR LD   N   ++P+ L +L  L  L
Sbjct: 521 PDTIGC-LVNLRSLRFRDNLIMRLPPSFSSLTSLRELDMSKNKFTNIPQSLLDLTGLTRL 579

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDV 159
               N      +PYS+    S +E DV
Sbjct: 580 RCGHN-----PIPYSLS--TSWIEDDV 599



 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 35/66 (53%)

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
           NIS     ++ LP  +GLL +L  L +  N++  LP SIG L  LQ +SLE N L   P 
Sbjct: 18  NISATKNEIKELPAEVGLLTALQSLKLGKNRLIALPPSIGNLTNLQVISLEENKLKEIPS 77

Query: 193 DVVEQG 198
            +   G
Sbjct: 78  QIENCG 83



 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 4/111 (3%)

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           L  +S   N+I  LP  +  LT+L+ L    N L +LP  + NL NL+V+++ +N   L+
Sbjct: 16  LSNISATKNEIKELPAEVGLLTALQSLKLGKNRLIALPPSIGNLTNLQVISLEEN--KLK 73

Query: 143 TLPYSIGLLMSLVELDVSYNKITTL--PDSIGCLRKLQKLSLEGNPLVSPP 191
            +P  I    SL  +DVS+N +  L  P  I  L+ L++L +  N + S P
Sbjct: 74  EIPSQIENCGSLRTIDVSHNNLRRLPIPRKISRLKLLKELRVAHNQIDSIP 124



 Score = 40.4 bits (93), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 5/100 (5%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ L   L  +  L +  N L  LP++IGCL  L+ L    NL+  LP +  +  SL E
Sbjct: 497 IPDQLCG-LARLRRLTLDKNGLCFLPDTIGCLVNLRSLRFRDNLIMRLPPSFSSLTSLRE 555

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLT 101
           L+ + NK   +P ++  +L  L  L    N I   P SL+
Sbjct: 556 LDMSKNKFTNIPQSL-LDLTGLTRLRCGHNPI---PYSLS 591


>gi|301610186|ref|XP_002934640.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           LOC401387 homolog [Xenopus (Silurana) tropicalis]
          Length = 813

 Score = 97.1 bits (240), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 106/186 (56%), Gaps = 3/186 (1%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           R  N+  L + +N +  LP S+  LSKL++L + GN L SLP  I +   L  LN N N+
Sbjct: 116 RCTNLQCLLLSNNFMTHLPTSLCHLSKLEILSLEGNALVSLPPEICSLSQLTALNVNHNQ 175

Query: 69  LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLIN 128
           +  LP  I   L N+K L  N NK+  LP  L  LT+L+VL    N +K+LP+   +L N
Sbjct: 176 IAVLPHEIS-GLKNIKQLFANNNKLSQLPPCLGDLTTLQVLCISGNSMKTLPDSTASLKN 234

Query: 129 LEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLV 188
           L VLN+  N   +  LP ++  L  LV+L +S N+I +LP  IG L+ L++LSL  N L 
Sbjct: 235 LHVLNLDGN--QISALPKAVFRLSQLVKLCLSGNQIKSLPKEIGDLKNLRELSLSSNQLT 292

Query: 189 SPPMDV 194
             P+ +
Sbjct: 293 FLPVQL 298



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 106/188 (56%), Gaps = 4/188 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P SL   L  + +L +  N L  LP  I  LS+L  L+V+ N +  LP  I   +++++
Sbjct: 133 LPTSL-CHLSKLEILSLEGNALVSLPPEICSLSQLTALNVNHNQIAVLPHEISGLKNIKQ 191

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L AN NKL QLP  +G +L  L+ L I+ N +  LP S   L +L VL+   N + +LP+
Sbjct: 192 LFANNNKLSQLPPCLG-DLTTLQVLCISGNSMKTLPDSTASLKNLHVLNLDGNQISALPK 250

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L  L  L +S N   +++LP  IG L +L EL +S N++T LP  +  L  L++L+
Sbjct: 251 AVFRLSQLVKLCLSGN--QIKSLPKEIGDLKNLRELSLSSNQLTFLPVQLYNLTSLEELT 308

Query: 182 LEGNPLVS 189
           L+ N L +
Sbjct: 309 LDDNKLTA 316



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 107/193 (55%), Gaps = 4/193 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+S TA L N+ VL++  NQ+  LP ++  LS+L  L +SGN ++SLPK I + ++L E
Sbjct: 225 LPDS-TASLKNLHVLNLDGNQISALPKAVFRLSQLVKLCLSGNQIKSLPKEIGDLKNLRE 283

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+L  LP  + + L +L+ L+++ NK+  +   L +L  L+VL    N L  + E
Sbjct: 284 LSLSSNQLTFLPVQL-YNLTSLEELTLDDNKLTAISDKLQNLKQLKVLSIANNLLTDITE 342

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +     +E L ++ N  Y   LP  I  L +L EL +  N +  LPD +  L  L  + 
Sbjct: 343 KVCWCPAIECLKLNGNQMY--RLPTKIHNLRNLKELHIERNALEMLPDQLAHLNNLSVIV 400

Query: 182 LEGNPLVSPPMDV 194
              N L+  P+++
Sbjct: 401 CANNNLLWIPIEL 413



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 95/169 (56%), Gaps = 6/169 (3%)

Query: 26  LPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKT 85
            P  +  L  L+ +D+SGN +E++P  I     L  +N + N  +  P  + F + +L+T
Sbjct: 524 FPIELCALKSLQKIDLSGNQIETVPSGISLLEGLRYVNLSNNSFKVFPREL-FSVSSLET 582

Query: 86  LSI---NCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           L I   +  K++ LP  L+ L +L+ L+   N +K+LP  +  + NL  L  + N  Y  
Sbjct: 583 LKISQKDGRKLISLPDELSKLKNLKELEISDNNIKTLPGSIGEMKNLVQLTATSNQLY-- 640

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
            LP SI  L +L +L +  N++T+LP  I  L+KL++++L+ NP++ PP
Sbjct: 641 HLPASISSLAALQQLSLKGNQLTSLPSDISGLQKLREINLDSNPMLRPP 689



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 106/190 (55%), Gaps = 10/190 (5%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+  LD+  N++  +P++I  L  L  L +  N     P  +   +SL++++ + N++
Sbjct: 485 LHNLAYLDLSRNEINSVPSAISNLESLSELLLHSNKFRRFPIELCALKSLQKIDLSGNQI 544

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVL-----DARLNCLKSLPEDLE 124
             +P  I   L  L+ ++++ N   + P+ L  ++SL  L     D R   L SLP++L 
Sbjct: 545 ETVPSGISL-LEGLRYVNLSNNSFKVFPRELFSVSSLETLKISQKDGRK--LISLPDELS 601

Query: 125 NLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEG 184
            L NL+ L IS N   ++TLP SIG + +LV+L  + N++  LP SI  L  LQ+LSL+G
Sbjct: 602 KLKNLKELEISDN--NIKTLPGSIGEMKNLVQLTATSNQLYHLPASISSLAALQQLSLKG 659

Query: 185 NPLVSPPMDV 194
           N L S P D+
Sbjct: 660 NQLTSLPSDI 669



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 80/145 (55%), Gaps = 4/145 (2%)

Query: 48  SLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSL 106
           ++P+T+     S+  +N N  +L ++P  + F   NL+ L ++ N +  LP SL HL+ L
Sbjct: 85  NMPRTVPSGTGSITSINLNSKELTEIPPDV-FRCTNLQCLLLSNNFMTHLPTSLCHLSKL 143

Query: 107 RVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITT 166
            +L    N L SLP ++ +L  L  LN++ N   +  LP+ I  L ++ +L  + NK++ 
Sbjct: 144 EILSLEGNALVSLPPEICSLSQLTALNVNHN--QIAVLPHEISGLKNIKQLFANNNKLSQ 201

Query: 167 LPDSIGCLRKLQKLSLEGNPLVSPP 191
           LP  +G L  LQ L + GN + + P
Sbjct: 202 LPPCLGDLTTLQVLCISGNSMKTLP 226



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 8/195 (4%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+  L +  N L+ LP+ +  L+ L V+  + N L  +P  ++NC  + +L+ + NKL
Sbjct: 370 LRNLKELHIERNALEMLPDQLAHLNNLSVIVCANNNLLWIPIELKNCNQITKLDLSGNKL 429

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
            ++P  +   + +L  L++N N+I  +  S+ H   L  L+   N L         L NL
Sbjct: 430 SEVPQALS-SMTSLLYLNLNQNEIHEIANSIIHNRKLEHLELSGNKLTVFSVHFCGLHNL 488

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
             L++S+N   + ++P +I  L SL EL +  NK    P  +  L+ LQK+ L GN +  
Sbjct: 489 AYLDLSRN--EINSVPSAISNLESLSELLLHSNKFRRFPIELCALKSLQKIDLSGNQI-- 544

Query: 190 PPMDVVEQGLSAVKG 204
              + V  G+S ++G
Sbjct: 545 ---ETVPSGISLLEG 556



 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 92/185 (49%), Gaps = 4/185 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+P+ L A L N+ V+   +N L  +P  +   +++  LD+SGN L  +P+ + +  SL 
Sbjct: 385 MLPDQL-AHLNNLSVIVCANNNLLWIPIELKNCNQITKLDLSGNKLSEVPQALSSMTSLL 443

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            LN N N++ ++ ++I      L+ L ++ NK+ +       L +L  LD   N + S+P
Sbjct: 444 YLNLNQNEIHEIANSI-IHNRKLEHLELSGNKLTVFSVHFCGLHNLAYLDLSRNEINSVP 502

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             +       +  +  +       P  +  L SL ++D+S N+I T+P  I  L  L+ +
Sbjct: 503 SAIS--NLESLSELLLHSNKFRRFPIELCALKSLQKIDLSGNQIETVPSGISLLEGLRYV 560

Query: 181 SLEGN 185
           +L  N
Sbjct: 561 NLSNN 565



 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 35/62 (56%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           N+V L   SNQL  LP SI  L+ L+ L + GN L SLP  I   + L E+N + N + +
Sbjct: 628 NLVQLTATSNQLYHLPASISSLAALQQLSLKGNQLTSLPSDISGLQKLREINLDSNPMLR 687

Query: 72  LP 73
            P
Sbjct: 688 PP 689



 Score = 41.6 bits (96), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ L ++L N+  L++  N +K LP SIG +  L  L  + N L  LP +I +  +L++
Sbjct: 596 LPDEL-SKLKNLKELEISDNNIKTLPGSIGEMKNLVQLTATSNQLYHLPASISSLAALQQ 654

Query: 62  LNANFNKLRQLPDTIG 77
           L+   N+L  LP  I 
Sbjct: 655 LSLKGNQLTSLPSDIS 670


>gi|421117596|ref|ZP_15577955.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410010810|gb|EKO68942.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
          Length = 286

 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 76/220 (34%), Positives = 119/220 (54%), Gaps = 8/220 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L N+  L +H NQL  LP  I  L  L++L +  N L +L K IE  ++L+ L+ + N
Sbjct: 67  GQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNN 126

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  LP+ I  +L NLK+L ++ N+    P+ +  L +L+VL    N L  LP ++  L 
Sbjct: 127 QLTTLPNEIE-QLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQLTILPNEIAKLK 185

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L +S N   L TLP  I  L +L  LD+SYN++T LP  +G L  LQ L L  N L
Sbjct: 186 KLQYLYLSDN--QLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 243

Query: 188 VSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKLV 227
            + P ++       +K   +  + N+  S ++K  + KL+
Sbjct: 244 KTLPKEI-----EQLKNLQTLNLWNNQLSSEEKEKIRKLI 278



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 85/149 (57%), Gaps = 3/149 (2%)

Query: 48  SLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLR 107
            L K ++N   +  L+ +  KL+ LP  IG +L NL+ L ++ N++ +LPQ +  L +L+
Sbjct: 38  DLTKALQNPLEVRVLDLSRQKLKTLPIEIG-QLKNLQRLYLHYNQLTVLPQEIEQLKNLQ 96

Query: 108 VLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTL 167
           +L  R N L +L +D+E L NL+ L++S N   L TLP  I  L +L  L +S N+  T 
Sbjct: 97  LLYLRSNRLTTLSKDIEQLQNLKSLDLSNN--QLTTLPNEIEQLKNLKSLYLSENQFATF 154

Query: 168 PDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           P  IG L+ L+ L L  N L   P ++ +
Sbjct: 155 PKEIGQLQNLKVLFLNNNQLTILPNEIAK 183


>gi|417768855|ref|ZP_12416780.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418682279|ref|ZP_13243499.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|400326289|gb|EJO78558.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409949164|gb|EKN99143.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|455668679|gb|EMF33872.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 219

 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 67/158 (42%), Positives = 95/158 (60%), Gaps = 3/158 (1%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           +++++LD+S     +LPK I    +LE LN   NKL  LP+ IG EL NLK L I  NKI
Sbjct: 46  NEVRILDLSRKQRTTLPKEIGQLVNLERLNLRDNKLTNLPEEIG-ELENLKILDITRNKI 104

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
              P+    L +L VL    N L +LPE++  L  L +L ++ N   L TLP  IG L +
Sbjct: 105 STFPKEFWKLKNLEVLLLNGNSLSNLPEEIGELEKLGILYLNNN--QLTTLPKEIGQLEN 162

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LV L +S NK+T++PD +G L+KL+ L+L  NP ++ P
Sbjct: 163 LVSLSLSSNKLTSIPDELGQLKKLRILNLWDNPTLTTP 200



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 73/130 (56%), Gaps = 1/130 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L+N+  L++  N+L  LP  IG L  LK+LD++ N + + PK     ++LE L  N N
Sbjct: 66  GQLVNLERLNLRDNKLTNLPEEIGELENLKILDITRNKISTFPKEFWKLKNLEVLLLNGN 125

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L  LP+ IG EL  L  L +N N++  LP+ +  L +L  L    N L S+P++L  L 
Sbjct: 126 SLSNLPEEIG-ELEKLGILYLNNNQLTTLPKEIGQLENLVSLSLSSNKLTSIPDELGQLK 184

Query: 128 NLEVLNISQN 137
            L +LN+  N
Sbjct: 185 KLRILNLWDN 194



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 2/92 (2%)

Query: 105 SLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
            +R+LD       +LP+++  L+NLE LN+  N   L  LP  IG L +L  LD++ NKI
Sbjct: 47  EVRILDLSRKQRTTLPKEIGQLVNLERLNLRDN--KLTNLPEEIGELENLKILDITRNKI 104

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE 196
           +T P     L+ L+ L L GN L + P ++ E
Sbjct: 105 STFPKEFWKLKNLEVLLLNGNSLSNLPEEIGE 136



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 63/112 (56%), Gaps = 2/112 (1%)

Query: 83  LKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLE 142
           ++ L ++  +   LP+ +  L +L  L+ R N L +LPE++  L NL++L+I++N   + 
Sbjct: 48  VRILDLSRKQRTTLPKEIGQLVNLERLNLRDNKLTNLPEEIGELENLKILDITRN--KIS 105

Query: 143 TLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           T P     L +L  L ++ N ++ LP+ IG L KL  L L  N L + P ++
Sbjct: 106 TFPKEFWKLKNLEVLLLNGNSLSNLPEEIGELEKLGILYLNNNQLTTLPKEI 157


>gi|291395454|ref|XP_002714052.1| PREDICTED: ERBB2 interacting protein [Oryctolagus cuniculus]
          Length = 1399

 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 105/183 (57%), Gaps = 4/183 (2%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           N+L  +P  IG L +L  LDVS N +E + + I  C +L++L  + N L+QLP+TIG  L
Sbjct: 217 NRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIG-SL 275

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
            N+ TL I+ N+++ LP S+  L S+  LD   N +++LP  +  L N+       N  Y
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLISIEELDCSFNEVEALPSSIGQLTNIRTFAADHN--Y 333

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVE-QGL 199
           L+ LP  IG   ++  L +  NK+  LP+ +G ++KL+ ++L  N L + P    + Q L
Sbjct: 334 LQQLPPEIGNWKNVTVLFLHSNKLELLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQL 393

Query: 200 SAV 202
           +A+
Sbjct: 394 TAM 396



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 111/202 (54%), Gaps = 13/202 (6%)

Query: 4   ESLTARLLNVVVL---DVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           E L  +L N   L    +  N L  LP SI  L  L+ LDVS N ++  P+ I+NC+ L 
Sbjct: 59  EELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLT 118

Query: 61  ELNANFNKLRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            + A+ N + +LPD  GF +L+NL  L +N   +  LP +   LT L++L+ R N LK L
Sbjct: 119 VVEASVNPISKLPD--GFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P+ +  L  LE L++  N ++ E +P  +  L  L E  +  N++T +P  IG L++L  
Sbjct: 177 PKTMNRLTQLERLDLGSN-EFTE-VPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTY 234

Query: 180 LSLEGNPLVSPPMDVVEQGLSA 201
           L +  N +     ++VE+G+SA
Sbjct: 235 LDVSKNNI-----EMVEEGISA 251



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSK-LKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           V  LD     L+ +P  I    K L+ L +  N +E LPK + NC+SL +L+   N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           LP +I   LINL+ L ++ N I   P+++ +   L V++A +N +  LP+    L+NL  
Sbjct: 84  LPASIA-NLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L +  N  +LE LP + G L  L  L++  N++  LP ++  L +L++L L  N     P
Sbjct: 143 LYL--NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 192 MDVVEQGLSAVKGY 205
            +V+EQ LS +K +
Sbjct: 201 -EVLEQ-LSGLKEF 212



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           ++LLN+  L ++   L+ LP + G L+KL++L++  N L+ LPKT+     LE L+   N
Sbjct: 135 SQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSN 194

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARL-------------- 113
           +  ++P+ +  +L  LK   ++ N++  +P  +  L  L  LD                 
Sbjct: 195 EFTEVPEVLE-QLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACE 253

Query: 114 ---------NCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKI 164
                    N L+ LPE + +L N+  L I +N   L  LP SIG L+S+ ELD S+N++
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLISIEELDCSFNEV 311

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             LP SIG L  ++  + + N L   P ++
Sbjct: 312 EALPSSIGQLTNIRTFAADHNYLQQLPPEI 341



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 94/163 (57%), Gaps = 4/163 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+ E ++A   N+  L + SN L+ LP +IG L  +  L +  N L  LP +I    S+E
Sbjct: 244 MVEEGISA-CENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLISIE 302

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           EL+ +FN++  LP +IG +L N++T + + N +  LP  + +  ++ VL    N L+ LP
Sbjct: 303 ELDCSFNEVEALPSSIG-QLTNIRTFAADHNYLQQLPPEIGNWKNVTVLFLHSNKLELLP 361

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNK 163
           E++ ++  L+V+N+S N   L+ LP+S   L  L  + +S N+
Sbjct: 362 EEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402


>gi|387016772|gb|AFJ50505.1| Leucine-rich repeat-containing protein 1-like [Crotalus adamanteus]
          Length = 524

 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 80/216 (37%), Positives = 113/216 (52%), Gaps = 27/216 (12%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PES    L N+  L  +   L+ LP +IG L  L  L++  NLL  LP+++ + + LEE
Sbjct: 120 LPESF-PELQNLTCLSANDISLQALPENIGNLYNLASLELRENLLTYLPESVAHLQRLEE 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N+L  LP TIG  L NLK L ++ N++  +PQ +  L +L  LD   N L+ LPE
Sbjct: 179 LDLGNNELYNLPGTIG-ALYNLKDLWLDGNQLAEIPQEIGSLKNLLCLDISENKLEKLPE 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT---------------- 165
           ++  L  L  L ISQN   LE LP  +G L  L  L V  N++T                
Sbjct: 238 EINGLTALTDLLISQNL--LEMLPDGVGKLKKLSILKVDQNRLTQLTEAVGNCECLTELV 295

Query: 166 -------TLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
                  TLP SIG L+KL  L+++ N LVS P ++
Sbjct: 296 LTENQLLTLPKSIGKLKKLNILNVDRNKLVSLPKEI 331



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 108/195 (55%), Gaps = 7/195 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   +R L  ++LD  +NQL+ LP     L KL+ L +S N ++ LP  I N   L
Sbjct: 27  VPEEIYRYSRSLEELLLD--ANQLRELPKPFFQLIKLRKLGLSDNEIQRLPPEIANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F   +L+    + N +  LP+S   L +L  L A    L++L
Sbjct: 85  VELDLSRNDIPEIPESISF-CKSLQVADFSGNPLTRLPESFPELQNLTCLSANDISLQAL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           PE++ NL NL  L + +N   L  LP S+  L  L ELD+  N++  LP +IG L  L+ 
Sbjct: 144 PENIGNLYNLASLELRENL--LTYLPESVAHLQRLEELDLGNNELYNLPGTIGALYNLKD 201

Query: 180 LSLEGNPLVSPPMDV 194
           L L+GN L   P ++
Sbjct: 202 LWLDGNQLAEIPQEI 216



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 95/178 (53%), Gaps = 3/178 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LD+  N +  +P SI     L+V D SGN L  LP++    ++L  L+AN  
Sbjct: 79  ANFMQLVELDLSRNDIPEIPESISFCKSLQVADFSGNPLTRLPESFPELQNLTCLSANDI 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP+ IG  L NL +L +  N +  LP+S+ HL  L  LD   N L +LP  +  L 
Sbjct: 139 SLQALPENIG-NLYNLASLELRENLLTYLPESVAHLQRLEELDLGNNELYNLPGTIGALY 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           NL+ L +  N   L  +P  IG L +L+ LD+S NK+  LP+ I  L  L  L +  N
Sbjct: 198 NLKDLWLDGN--QLAEIPQEIGSLKNLLCLDISENKLEKLPEEINGLTALTDLLISQN 253



 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 72/137 (52%), Gaps = 3/137 (2%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           M+P+ +  +L  + +L V  N+L  L  ++G    L  L ++ N L +LPK+I   + L 
Sbjct: 257 MLPDGV-GKLKKLSILKVDQNRLTQLTEAVGNCECLTELVLTENQLLTLPKSIGKLKKLN 315

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
            LN + NKL  LP  IG    +L   S+  N++  +P  ++H T L VLD   N L  LP
Sbjct: 316 ILNVDRNKLVSLPKEIGG-CCSLNVFSVRDNQLSRIPPEISHATELHVLDVAGNRLIHLP 374

Query: 121 EDLENLINLEVLNISQN 137
             L +L  L+ L +S N
Sbjct: 375 MSLTSL-KLKALWLSDN 390



 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 28/160 (17%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           + CLP    C   ++++D     L ++P+ I    RSLEEL  + N+LR+LP    F+LI
Sbjct: 2   VHCLP-LWRCNRHVEMIDKRHCSLAAVPEEIYRYSRSLEELLLDANQLRELPKPF-FQLI 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
            L+ L ++ N+I                       + LP ++ N + L  L++S+N   +
Sbjct: 60  KLRKLGLSDNEI-----------------------QRLPPEIANFMQLVELDLSRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
             +P SI    SL   D S N +T LP+S   L+ L  LS
Sbjct: 95  PEIPESISFCKSLQVADFSGNPLTRLPESFPELQNLTCLS 134


>gi|390475905|ref|XP_002807686.2| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog
           [Callithrix jacchus]
          Length = 1471

 Score = 96.7 bits (239), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 108/186 (58%), Gaps = 5/186 (2%)

Query: 9   RLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK 68
           RLLN+  L +  N+++ LP  +    +L  LDVS N +  +P++I+ C++LE  + + N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNP 116

Query: 69  LRQLPDTIGF-ELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           L +LPD  GF +L +L  L++N   +  LP  + +L +L  L+ R N LKSLP  L  L+
Sbjct: 117 LSRLPD--GFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 174

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE L++  N   LE LP ++G L +L EL +  N+++ LP  +G LR+L  L +  N L
Sbjct: 175 KLEQLDLGGN--DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 188 VSPPMD 193
              P +
Sbjct: 233 EELPAE 238



 Score = 90.1 bits (222), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 7/192 (3%)

Query: 2   IPESLT--ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSL 59
           +PE +   +R L  ++LD  +NQL+ LP     L  L+ L +S N ++ LP  + N   L
Sbjct: 27  VPEEIYRYSRSLEELLLD--ANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQL 84

Query: 60  EELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
            EL+ + N + ++P++I F    L+    + N +  LP   T L SL  L      L++L
Sbjct: 85  VELDVSRNDIPEIPESIKF-CKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143

Query: 120 PEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           P D+ NL NL  L + +N   L++LP S+  L+ L +LD+  N +  LPD++G L  L++
Sbjct: 144 PGDVGNLANLVTLELRENL--LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRE 201

Query: 180 LSLEGNPLVSPP 191
           L L+ N L + P
Sbjct: 202 LWLDRNQLSALP 213



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 3/161 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A  + +V LDV  N +  +P SI     L++ D SGN L  LP      RSL  L  N  
Sbjct: 79  ANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDV 138

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            L+ LP  +G  L NL TL +  N +  LP SL+ L  L  LD   N L+ LP+ L  L 
Sbjct: 139 SLQALPGDVG-NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 197

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP 168
           NL  L + +N   L  LP  +G L  LV LDVS N++  LP
Sbjct: 198 NLRELWLDRN--QLSALPPELGNLRRLVCLDVSENRLEELP 236



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 68/190 (35%), Positives = 105/190 (55%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+  T +L ++  L ++   L+ LP  +G L+ L  L++  NLL+SLP ++     LE+
Sbjct: 120 LPDGFT-QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQ 178

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   N L  LPDT+G  L NL+ L ++ N++  LP  L +L  L  LD   N L+ LP 
Sbjct: 179 LDLGGNDLEVLPDTLG-ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPA 237

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
           +L  L+ L  L +SQN   L+ LP  IG L  L  L V  N++  + ++IG    L +L 
Sbjct: 238 ELGGLVLLTDLLLSQNL--LQRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELI 295

Query: 182 LEGNPLVSPP 191
           L  N L++ P
Sbjct: 296 LTENLLMALP 305



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 3/185 (1%)

Query: 10  LLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKL 69
           L N+V L++  N LK LP S+  L KL+ LD+ GN LE LP T+    +L EL  + N+L
Sbjct: 150 LANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 209

Query: 70  RQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINL 129
             LP  +G  L  L  L ++ N++  LP  L  L  L  L    N L+ LP+ +  L  L
Sbjct: 210 SALPPELG-NLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQL 268

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVS 189
            +L + QN   L  +  +IG   +L EL ++ N +  LP S+G L KL  L+++ N L +
Sbjct: 269 SILKVDQN--RLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNQLEA 326

Query: 190 PPMDV 194
            P ++
Sbjct: 327 LPSEI 331



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 68/202 (33%), Positives = 104/202 (51%), Gaps = 4/202 (1%)

Query: 1   MIPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLE 60
           ++P++L A L N+  L +  NQL  LP  +G L +L  LDVS N LE LP  +     L 
Sbjct: 188 VLPDTLGA-LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLT 246

Query: 61  ELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLP 120
           +L  + N L++LPD IG +L  L  L ++ N++  + +++    +L  L    N L +LP
Sbjct: 247 DLLLSQNLLQRLPDGIG-QLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALP 305

Query: 121 EDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKL 180
             L  L  L  LN+ +N   LE LP  IG  ++L  L +  N++  LP  +    +L  L
Sbjct: 306 RSLGKLTKLTNLNVDRN--QLEALPSEIGGCVALSVLSLRDNRLAVLPPELAHTSELHVL 363

Query: 181 SLEGNPLVSPPMDVVEQGLSAV 202
            + GN L S P  +    L A+
Sbjct: 364 DVAGNRLQSLPFALTHLNLKAL 385



 Score = 68.2 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 47/136 (34%), Positives = 76/136 (55%), Gaps = 3/136 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  +L  + +L V  N+L  +  +IG    L  L ++ NLL +LP+++     L  
Sbjct: 258 LPDGI-GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTN 316

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN + N+L  LP  IG   + L  LS+  N++ +LP  L H + L VLD   N L+SLP 
Sbjct: 317 LNVDRNQLEALPSEIG-GCVALSVLSLRDNRLAVLPPELAHTSELHVLDVAGNRLQSLPF 375

Query: 122 DLENLINLEVLNISQN 137
            L +L NL+ L +++N
Sbjct: 376 ALTHL-NLKALWLAEN 390



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 28/173 (16%)

Query: 23  LKCLPNSIGCLSKLKVLDVSGNLLESLPKTI-ENCRSLEELNANFNKLRQLPDTIGFELI 81
           LKC+P    C   ++ +D     L+++P+ I    RSLEEL  + N+LR+LP    F L+
Sbjct: 2   LKCIP-LWRCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPF-FRLL 59

Query: 82  NLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYL 141
           NL+ L ++ N+I                       + LP ++ N + L  L++S+N   +
Sbjct: 60  NLRKLGLSDNEI-----------------------QRLPPEVANFMQLVELDVSRN--DI 94

Query: 142 ETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
             +P SI    +L   D S N ++ LPD    LR L  L+L    L + P DV
Sbjct: 95  PEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDV 147


>gi|344281680|ref|XP_003412606.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           [Loxodonta africana]
          Length = 1050

 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 107/195 (54%), Gaps = 4/195 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P  L A L ++  LDV  N+L  LP+S+ CL +L+ LDV  N L + P+ +    +LEE
Sbjct: 150 LPAQLGA-LAHLEELDVSFNRLAHLPDSLSCLHRLRTLDVDHNQLTAFPQQLLQLVALEE 208

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+ + N+LR LP+ I   L  LK L ++  ++  LP S   L SL  L    N L++LP 
Sbjct: 209 LDVSSNRLRGLPEDIS-ALRALKILWLSGAELGTLPSSFCELASLESLMLDNNGLQALPA 267

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
               L  L++LN+S N    E  P ++  L  L EL +S N++T++P  I  L +L  L 
Sbjct: 268 QFSRLQKLKMLNLSSNL--FEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLSRLLTLW 325

Query: 182 LEGNPLVSPPMDVVE 196
           L+ N +   P  +VE
Sbjct: 326 LDNNRIRYLPDSIVE 340



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/171 (38%), Positives = 93/171 (54%), Gaps = 4/171 (2%)

Query: 16  LDVHSNQLKCL-PNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPD 74
           LDV  N+L  L    +  L +L+ L++S N L SLP  +     LEEL+ +FN+L  LPD
Sbjct: 116 LDVSHNRLTALGAEVVSALRELRKLNLSHNQLPSLPAQLGALAHLEELDVSFNRLAHLPD 175

Query: 75  TIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNI 134
           ++   L  L+TL ++ N++   PQ L  L +L  LD   N L+ LPED+  L  L++L +
Sbjct: 176 SLSC-LHRLRTLDVDHNQLTAFPQQLLQLVALEELDVSSNRLRGLPEDISALRALKILWL 234

Query: 135 SQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGN 185
           S     L TLP S   L SL  L +  N +  LP     L+KL+ L+L  N
Sbjct: 235 SG--AELGTLPSSFCELASLESLMLDNNGLQALPAQFSRLQKLKMLNLSSN 283



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/146 (35%), Positives = 79/146 (54%), Gaps = 8/146 (5%)

Query: 55  NCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLT----HLTSLRVLD 110
           N   +E LN   N L ++P  +G  L +L+ L +  N+   LP ++     HLT L V  
Sbjct: 61  NIGDIEVLNLGNNGLEEVPHGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSH 120

Query: 111 ARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDS 170
            RL  L +  E +  L  L  LN+S N   L +LP  +G L  L ELDVS+N++  LPDS
Sbjct: 121 NRLTALGA--EVVSALRELRKLNLSHN--QLPSLPAQLGALAHLEELDVSFNRLAHLPDS 176

Query: 171 IGCLRKLQKLSLEGNPLVSPPMDVVE 196
           + CL +L+ L ++ N L + P  +++
Sbjct: 177 LSCLHRLRTLDVDHNQLTAFPQQLLQ 202


>gi|392396972|ref|YP_006433573.1| Leucine Rich Repeat (LRR)-containing protein [Flexibacter litoralis
           DSM 6794]
 gi|390528050|gb|AFM03780.1| Leucine Rich Repeat (LRR)-containing protein [Flexibacter litoralis
           DSM 6794]
          Length = 439

 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 107/187 (57%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
           A L ++  L++  N+L+ +P+ IG   +++VL +S   L  +P T+ N   LEEL+  FN
Sbjct: 217 ATLTSLKELNLSMNELEVIPSFIGNYREMRVLSISATRLIEIPDTLSNLLKLEELDIGFN 276

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
            LR+ P +I  +L  LK L I+ N+I  +P  ++ L ++  L+   N L + PE++ +L 
Sbjct: 277 HLREFPISI-IKLTKLKKLDISANRISNIPSQISALKNVEELNVNSNKLYNFPEEITSLT 335

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L++S  F  +  +P+SI  L  L  LD++ N+ ++ P  I  L KL+ L L  N +
Sbjct: 336 KLKKLDLS--FNTISQIPFSIKKLKGLESLDIAVNQFSSFPKEILSLTKLEVLYLSSNSI 393

Query: 188 VSPPMDV 194
            + P+ +
Sbjct: 394 QTIPLSI 400



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 105/193 (54%), Gaps = 4/193 (2%)

Query: 3   PESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEEL 62
           P+ +T +L N+ VL    + +  +P  I  L  L+ LD+S N +E LPK +     LE L
Sbjct: 144 PDVIT-KLKNLKVLKFTDSFITKIPKEIENLKMLRELDLSQNRIEKLPKNLSKLNRLESL 202

Query: 63  NANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPED 122
             N N+   LP  I   L +LK L+++ N++ ++P  + +   +RVL      L  +P+ 
Sbjct: 203 ILNHNEFTSLPKQIA-TLTSLKELNLSMNELEVIPSFIGNYREMRVLSISATRLIEIPDT 261

Query: 123 LENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSL 182
           L NL+ LE L+I   F +L   P SI  L  L +LD+S N+I+ +P  I  L+ +++L++
Sbjct: 262 LSNLLKLEELDIG--FNHLREFPISIIKLTKLKKLDISANRISNIPSQISALKNVEELNV 319

Query: 183 EGNPLVSPPMDVV 195
             N L + P ++ 
Sbjct: 320 NSNKLYNFPEEIT 332



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 100/179 (55%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           LD+  N+++ LP ++  L++L+ L ++ N   SLPK I    SL+ELN + N+L  +P  
Sbjct: 179 LDLSQNRIEKLPKNLSKLNRLESLILNHNEFTSLPKQIATLTSLKELNLSMNELEVIPSF 238

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG     ++ LSI+  +++ +P +L++L  L  LD   N L+  P  +  L  L+ L+IS
Sbjct: 239 IG-NYREMRVLSISATRLIEIPDTLSNLLKLEELDIGFNHLREFPISIIKLTKLKKLDIS 297

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   +  +P  I  L ++ EL+V+ NK+   P+ I  L KL+KL L  N +   P  +
Sbjct: 298 AN--RISNIPSQISALKNVEELNVNSNKLYNFPEEITSLTKLKKLDLSFNTISQIPFSI 354



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 98/180 (54%), Gaps = 3/180 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L ++ N+   LP  I  L+ LK L++S N LE +P  I N R +  L+ +  +L ++PDT
Sbjct: 202 LILNHNEFTSLPKQIATLTSLKELNLSMNELEVIPSFIGNYREMRVLSISATRLIEIPDT 261

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           +   L+ L+ L I  N +   P S+  LT L+ LD   N + ++P  +  L N+E LN++
Sbjct: 262 LS-NLLKLEELDIGFNHLREFPISIIKLTKLKKLDISANRISNIPSQISALKNVEELNVN 320

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVV 195
            N  Y    P  I  L  L +LD+S+N I+ +P SI  L+ L+ L +  N   S P +++
Sbjct: 321 SNKLY--NFPEEITSLTKLKKLDLSFNTISQIPFSIKKLKGLESLDIAVNQFSSFPKEIL 378



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 95/165 (57%), Gaps = 4/165 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP++L + LL +  LD+  N L+  P SI  L+KLK LD+S N + ++P  I   +++EE
Sbjct: 258 IPDTL-SNLLKLEELDIGFNHLREFPISIIKLTKLKKLDISANRISNIPSQISALKNVEE 316

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           LN N NKL   P+ I   L  LK L ++ N I  +P S+  L  L  LD  +N   S P+
Sbjct: 317 LNVNSNKLYNFPEEIT-SLTKLKKLDLSFNTISQIPFSIKKLKGLESLDIAVNQFSSFPK 375

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITT 166
           ++ +L  LEVL +S N   ++T+P SI  L +L EL+   N ++ 
Sbjct: 376 EILSLTKLEVLYLSSN--SIQTIPLSIEKLTNLEELNCRQNPLSA 418



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/180 (35%), Positives = 95/180 (52%), Gaps = 4/180 (2%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNK-LRQ 71
           VV L  + N+LK +P  I  L  LK L    N ++ LP  + N   LEEL  + N  L+ 
Sbjct: 83  VVELKFYRNELKIVPVEIAQLIHLKKLSFPHNWIDDLPAELANLDKLEELEIDNNYGLKH 142

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
            PD I  +L NLK L    + I  +P+ + +L  LR LD   N ++ LP++L  L  LE 
Sbjct: 143 FPDVIT-KLKNLKVLKFTDSFITKIPKEIENLKMLRELDLSQNRIEKLPKNLSKLNRLES 201

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           L ++ N     +LP  I  L SL EL++S N++  +P  IG  R+++ LS+    L+  P
Sbjct: 202 LILNHN--EFTSLPKQIATLTSLKELNLSMNELEVIPSFIGNYREMRVLSISATRLIEIP 259


>gi|255070745|ref|XP_002507454.1| predicted protein [Micromonas sp. RCC299]
 gi|226522729|gb|ACO68712.1| predicted protein [Micromonas sp. RCC299]
          Length = 642

 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/189 (35%), Positives = 106/189 (56%), Gaps = 3/189 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L+ +  L ++ NQL  +P  IG L+ L  L +  N L S+P  I    SL+EL    N
Sbjct: 140 GQLVALTELTLYGNQLTSVPAEIGQLTSLTDLYLGCNQLTSVPAWIGQLTSLKELTLYGN 199

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  IG +L  L+ LS+  NK+  +P  +  L +L++L    N L S+P ++  L 
Sbjct: 200 QLTSVPAEIG-QLAALQWLSLKDNKLTSVPAEIGQLRALKLLRLNGNQLTSVPAEIGQLA 258

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +LE L +  N   L ++P  IG L SL +L + +NK+T++P  IG L  L +L LEGN L
Sbjct: 259 SLENLLLGHN--QLTSVPAEIGQLTSLRKLYLDHNKLTSVPVEIGQLTSLVRLELEGNQL 316

Query: 188 VSPPMDVVE 196
            S P ++ +
Sbjct: 317 TSVPAEIWQ 325



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 101/179 (56%), Gaps = 3/179 (1%)

Query: 16  LDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDT 75
           L ++ NQL  +P  IG L+ L+ L +  N L S+P  I   R+L+ L  N N+L  +P  
Sbjct: 194 LTLYGNQLTSVPAEIGQLAALQWLSLKDNKLTSVPAEIGQLRALKLLRLNGNQLTSVPAE 253

Query: 76  IGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNIS 135
           IG +L +L+ L +  N++  +P  +  LTSLR L    N L S+P ++  L +L  L + 
Sbjct: 254 IG-QLASLENLLLGHNQLTSVPAEIGQLTSLRKLYLDHNKLTSVPVEIGQLTSLVRLELE 312

Query: 136 QNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
            N   L ++P  I  L SL  L++ YN++T++P  IG L  L++L L GN L S P +V
Sbjct: 313 GN--QLTSVPAEIWQLTSLKWLNLGYNQLTSVPAEIGQLAALKELCLYGNQLTSVPAEV 369



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 112/219 (51%), Gaps = 9/219 (4%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            RL  + VLD+ +  L  +P  IG L+ L VL +  N L S+P  I    SL  L    N
Sbjct: 25  GRLSALKVLDLRNYHLTSVPAEIGQLTSLGVLHLDNNQLTSVPAEIGQLTSLTHLYLGCN 84

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  IG +L +L  L +  N++  +P  +  L SL  L    N L S+P ++  L+
Sbjct: 85  QLTSVPAWIG-QLTSLTHLELWSNRLTSVPAEIGQLASLEKLHLEGNQLTSVPAEIGQLV 143

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L  L +  N   L ++P  IG L SL +L +  N++T++P  IG L  L++L+L GN L
Sbjct: 144 ALTELTLYGN--QLTSVPAEIGQLTSLTDLYLGCNQLTSVPAWIGQLTSLKELTLYGNQL 201

Query: 188 VSPPMDVVEQGLSAVKGYLSEKMNNDHKSPKKKSWVGKL 226
            S P ++   G  A   +LS K N     P +   +G+L
Sbjct: 202 TSVPAEI---GQLAALQWLSLKDNKLTSVPAE---IGQL 234



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 104/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++  L++ SN+L  +P  IG L+ L+ L + GN L S+P  I    +L EL    N
Sbjct: 94  GQLTSLTHLELWSNRLTSVPAEIGQLASLEKLHLEGNQLTSVPAEIGQLVALTELTLYGN 153

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  IG +L +L  L + CN++  +P  +  LTSL+ L    N L S+P ++  L 
Sbjct: 154 QLTSVPAEIG-QLTSLTDLYLGCNQLTSVPAWIGQLTSLKELTLYGNQLTSVPAEIGQLA 212

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L+ L++  N   L ++P  IG L +L  L ++ N++T++P  IG L  L+ L L  N L
Sbjct: 213 ALQWLSLKDN--KLTSVPAEIGQLRALKLLRLNGNQLTSVPAEIGQLASLENLLLGHNQL 270

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 271 TSVPAEI 277



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 93/167 (55%), Gaps = 3/167 (1%)

Query: 25  CLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLK 84
            +P  +G LS LKVLD+    L S+P  I    SL  L+ + N+L  +P  IG +L +L 
Sbjct: 19  AVPAEVGRLSALKVLDLRNYHLTSVPAEIGQLTSLGVLHLDNNQLTSVPAEIG-QLTSLT 77

Query: 85  TLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETL 144
            L + CN++  +P  +  LTSL  L+   N L S+P ++  L +LE L++  N   L ++
Sbjct: 78  HLYLGCNQLTSVPAWIGQLTSLTHLELWSNRLTSVPAEIGQLASLEKLHLEGN--QLTSV 135

Query: 145 PYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           P  IG L++L EL +  N++T++P  IG L  L  L L  N L S P
Sbjct: 136 PAEIGQLVALTELTLYGNQLTSVPAEIGQLTSLTDLYLGCNQLTSVP 182



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 102/187 (54%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++V L +  N+L  +P  IG L+ L+ L ++ N L SLP  I    SL E     N
Sbjct: 439 GQLASLVGLHLRDNRLTGVPAEIGQLTSLEWLYLAENQLTSLPAEIGQLTSLVESLLGGN 498

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  IG +L +L  L +  N++  +P  +  LT+LR L+   N L  LP ++  L 
Sbjct: 499 QLTSVPAEIG-QLTSLTHLDLVDNQLTSVPAEVGRLTALRELNVSRNALTLLPAEIGRLT 557

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           +L+ L + +N   L ++P  IG L SL EL ++ N++T+LP  IG L  L  L L GN L
Sbjct: 558 SLKGLYLDEN--ELTSVPAEIGQLTSLQELWLNDNQLTSLPAEIGLLIWLHILRLGGNQL 615

Query: 188 VSPPMDV 194
            S P  +
Sbjct: 616 TSMPAAI 622



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/177 (38%), Positives = 97/177 (54%), Gaps = 3/177 (1%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           ++ NQL  +P  +G LS L+ L +S N L SLP  I    SL EL  + N+L  +P  IG
Sbjct: 357 LYGNQLTSVPAEVGRLSALRKLSLSRNRLTSLPAEIGQLTSLRELRLSDNQLTSVPAEIG 416

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
            +L  LK L +  N++  +P  +  L SL  L  R N L  +P ++  L +LE L +++N
Sbjct: 417 -QLRALKLLILLGNQLTSVPAEIGQLASLVGLHLRDNRLTGVPAEIGQLTSLEWLYLAEN 475

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
              L +LP  IG L SLVE  +  N++T++P  IG L  L  L L  N L S P +V
Sbjct: 476 --QLTSLPAEIGQLTSLVESLLGGNQLTSVPAEIGQLTSLTHLDLVDNQLTSVPAEV 530



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 103/187 (55%), Gaps = 3/187 (1%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++V L++  NQL  +P  I  L+ LK L++  N L S+P  I    +L+EL    N
Sbjct: 301 GQLTSLVRLELEGNQLTSVPAEIWQLTSLKWLNLGYNQLTSVPAEIGQLAALKELCLYGN 360

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
           +L  +P  +G  L  L+ LS++ N++  LP  +  LTSLR L    N L S+P ++  L 
Sbjct: 361 QLTSVPAEVG-RLSALRKLSLSRNRLTSLPAEIGQLTSLRELRLSDNQLTSVPAEIGQLR 419

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            L++L +  N   L ++P  IG L SLV L +  N++T +P  IG L  L+ L L  N L
Sbjct: 420 ALKLLILLGN--QLTSVPAEIGQLASLVGLHLRDNRLTGVPAEIGQLTSLEWLYLAENQL 477

Query: 188 VSPPMDV 194
            S P ++
Sbjct: 478 TSLPAEI 484



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 88/159 (55%), Gaps = 6/159 (3%)

Query: 21  NQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFEL 80
           NQL  LP  IG L+ L    + GN L S+P  I    SL  L+   N+L  +P  +G  L
Sbjct: 475 NQLTSLPAEIGQLTSLVESLLGGNQLTSVPAEIGQLTSLTHLDLVDNQLTSVPAEVG-RL 533

Query: 81  INLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQY 140
             L+ L+++ N + +LP  +  LTSL+ L    N L S+P ++  L +L+ L ++ N   
Sbjct: 534 TALRELNVSRNALTLLPAEIGRLTSLKGLYLDENELTSVPAEIGQLTSLQELWLNDN--Q 591

Query: 141 LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQK 179
           L +LP  IGLL+ L  L +  N++T++P +I   RKL+ 
Sbjct: 592 LTSLPAEIGLLIWLHILRLGGNQLTSMPAAI---RKLKA 627



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/142 (34%), Positives = 75/142 (52%), Gaps = 3/142 (2%)

Query: 53  IENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDAR 112
           +EN R ++     F+    +P  +G  L  LK L +    +  +P  +  LTSL VL   
Sbjct: 1   MENGRVVKLELEEFDLTGAVPAEVG-RLSALKVLDLRNYHLTSVPAEIGQLTSLGVLHLD 59

Query: 113 LNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
            N L S+P ++  L +L  L +  N   L ++P  IG L SL  L++  N++T++P  IG
Sbjct: 60  NNQLTSVPAEIGQLTSLTHLYLGCN--QLTSVPAWIGQLTSLTHLELWSNRLTSVPAEIG 117

Query: 173 CLRKLQKLSLEGNPLVSPPMDV 194
            L  L+KL LEGN L S P ++
Sbjct: 118 QLASLEKLHLEGNQLTSVPAEI 139



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 1/119 (0%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
            +L ++  LD+  NQL  +P  +G L+ L+ L+VS N L  LP  I    SL+ L  + N
Sbjct: 508 GQLTSLTHLDLVDNQLTSVPAEVGRLTALRELNVSRNALTLLPAEIGRLTSLKGLYLDEN 567

Query: 68  KLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENL 126
           +L  +P  IG +L +L+ L +N N++  LP  +  L  L +L    N L S+P  +  L
Sbjct: 568 ELTSVPAEIG-QLTSLQELWLNDNQLTSLPAEIGLLIWLHILRLGGNQLTSMPAAIRKL 625


>gi|428306331|ref|YP_007143156.1| small GTP-binding protein [Crinalium epipsammum PCC 9333]
 gi|428247866|gb|AFZ13646.1| small GTP-binding protein [Crinalium epipsammum PCC 9333]
          Length = 1011

 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 111/194 (57%), Gaps = 4/194 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE++ A+L N+    + +NQ+  +P +I  L+ L  L +S N +  +P+ I N  +L +
Sbjct: 164 IPEAI-AKLTNLTQFILSNNQITQIPEAIANLTNLTQLILSNNQITQIPEAIANLTNLTQ 222

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   NK+ Q+P+ I   LINL  L +  NKI  +P+++  LT+L  L    N +  +PE
Sbjct: 223 LDLLNNKITQIPEAIA-NLINLTQLDLLNNKITQIPEAIAKLTNLTQLILSDNKITQIPE 281

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            +  L NL  L++  N   +  +P +I  L +L +LD+  NKIT +P++I  L  L +L 
Sbjct: 282 AIAKLTNLTQLDLHSN--KITQIPEAIAKLTNLTQLDLRSNKITQIPEAIAKLTNLTQLD 339

Query: 182 LEGNPLVSPPMDVV 195
           L  N + + P++++
Sbjct: 340 LSDNSITNIPLEML 353



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/190 (32%), Positives = 109/190 (57%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+++ A+L N+  LD+ +NQ+  +P +I  L+ L  L +  N +  +P+ I    +L +
Sbjct: 118 IPDAI-AKLTNLTQLDLSNNQITQIPEAIAKLTNLTQLVLFNNQITQIPEAIAKLTNLTQ 176

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
              + N++ Q+P+ I   L NL  L ++ N+I  +P+++ +LT+L  LD   N +  +PE
Sbjct: 177 FILSNNQITQIPEAIA-NLTNLTQLILSNNQITQIPEAIANLTNLTQLDLLNNKITQIPE 235

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + NLINL  L++  N   +  +P +I  L +L +L +S NKIT +P++I  L  L +L 
Sbjct: 236 AIANLINLTQLDLLNN--KITQIPEAIAKLTNLTQLILSDNKITQIPEAIAKLTNLTQLD 293

Query: 182 LEGNPLVSPP 191
           L  N +   P
Sbjct: 294 LHSNKITQIP 303



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 119/217 (54%), Gaps = 13/217 (5%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IPE++ A L N+  L + +NQ+  +P +I  L+ L  LD+  N +  +P+ I N  +L +
Sbjct: 187 IPEAI-ANLTNLTQLILSNNQITQIPEAIANLTNLTQLDLLNNKITQIPEAIANLINLTQ 245

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+   NK+ Q+P+ I  +L NL  L ++ NKI  +P+++  LT+L  LD   N +  +PE
Sbjct: 246 LDLLNNKITQIPEAIA-KLTNLTQLILSDNKITQIPEAIAKLTNLTQLDLHSNKITQIPE 304

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLP-------DSIGCL 174
            +  L NL  L++  N   +  +P +I  L +L +LD+S N IT +P       D+   L
Sbjct: 305 AIAKLTNLTQLDLRSN--KITQIPEAIAKLTNLTQLDLSDNSITNIPLEMLNSKDAKEIL 362

Query: 175 RKLQKLSL-EGNPLVSPPMDVVEQGLSAVKGYLSEKM 210
             L+++S  E  PL    + ++ QG S  K  L E++
Sbjct: 363 NYLRQISTSETRPLHEAKLLLIGQG-SVGKTSLIERL 398



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/174 (35%), Positives = 94/174 (54%), Gaps = 3/174 (1%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           V  N LK LP  +  L  L+ LD+SGN LES+P  +     LEEL     KL ++PD I 
Sbjct: 64  VSGNNLKTLPLELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVKLTEIPDAIA 123

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
            +L NL  L ++ N+I  +P+++  LT+L  L    N +  +PE +  L NL    +S N
Sbjct: 124 -KLTNLTQLDLSNNQITQIPEAIAKLTNLTQLVLFNNQITQIPEAIAKLTNLTQFILSNN 182

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
              +  +P +I  L +L +L +S N+IT +P++I  L  L +L L  N +   P
Sbjct: 183 --QITQIPEAIANLTNLTQLILSNNQITQIPEAIANLTNLTQLDLLNNKITQIP 234



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 108/190 (56%), Gaps = 4/190 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +T ++L++  L +   +L  +P++I  L+ L  LD+S N +  +P+ I    +L +
Sbjct: 95  IPDVVT-QILHLEELILIRVKLTEIPDAIAKLTNLTQLDLSNNQITQIPEAIAKLTNLTQ 153

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L    N++ Q+P+ I  +L NL    ++ N+I  +P+++ +LT+L  L    N +  +PE
Sbjct: 154 LVLFNNQITQIPEAIA-KLTNLTQFILSNNQITQIPEAIANLTNLTQLILSNNQITQIPE 212

Query: 122 DLENLINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLS 181
            + NL NL  L++  N   +  +P +I  L++L +LD+  NKIT +P++I  L  L +L 
Sbjct: 213 AIANLTNLTQLDLLNN--KITQIPEAIANLINLTQLDLLNNKITQIPEAIAKLTNLTQLI 270

Query: 182 LEGNPLVSPP 191
           L  N +   P
Sbjct: 271 LSDNKITQIP 280



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 10/154 (6%)

Query: 39  LDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLS-INCNKIVILP 97
           LD+SG  L  LP  I   + LE L     K+        +E +  + L  ++ N +  LP
Sbjct: 21  LDLSGQELTELPGEIGKLQQLESLILG-KKIE------AYEFVGDRYLEKVSGNNLKTLP 73

Query: 98  QSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVEL 157
             L  L +LR LD   N L+S+P+ +  +++LE L + +    L  +P +I  L +L +L
Sbjct: 74  LELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIR--VKLTEIPDAIAKLTNLTQL 131

Query: 158 DVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           D+S N+IT +P++I  L  L +L L  N +   P
Sbjct: 132 DLSNNQITQIPEAIAKLTNLTQLVLFNNQITQIP 165


>gi|291398713|ref|XP_002715973.1| PREDICTED: leucine rich repeat containing 40 [Oryctolagus
           cuniculus]
          Length = 602

 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/205 (38%), Positives = 110/205 (53%), Gaps = 29/205 (14%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +V +++ SN LK LP  I  + KL+ LD S NLLES+P  +    SLE L    NKLR L
Sbjct: 199 LVRINLSSNHLKSLPAEISRMKKLRHLDCSSNLLESIPPELAGMESLELLYLRRNKLRFL 258

Query: 73  PDTIGFELINLKTLSINCNKIVILPQS-LTHLTSLRVLDARLNCLKSLPEDLENLINLEV 131
           P+    +L  LK L +  N+I +L    L HL+S+ VL+ R N LKS+P++         
Sbjct: 259 PEFPSCKL--LKELHVGENQIEMLAADHLKHLSSILVLELRDNKLKSVPDE--------- 307

Query: 132 LNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
                           I LL SL  LD+S N I++LP S+G L  L+ L+LEGNPL +  
Sbjct: 308 ----------------ISLLQSLERLDLSNNDISSLPYSLGNLH-LKFLALEGNPLRTIR 350

Query: 192 MDVVEQGLSAVKGYLSEKMNNDHKS 216
            +++ +G   V  YL  K+ +D  S
Sbjct: 351 REIINKGTQEVLKYLRSKIKDDGPS 375



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 93/170 (54%), Gaps = 3/170 (1%)

Query: 18  VHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIG 77
           + +N+L+ L + +  L  L VLD+  N L +LP  I    +L++LN + NKL+ LP+ I 
Sbjct: 89  ISNNKLQSLADDLRLLPALTVLDIHDNQLTTLPSAIRELENLQKLNVSHNKLKILPEEIT 148

Query: 78  FELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQN 137
             L NLK+L +  N++ ++P+    L+SL  LD   N L ++     +L  L  +N+S N
Sbjct: 149 -NLRNLKSLYLQHNELAVIPEGFEQLSSLEDLDLSNNRLTTISAGFSSLSGLVRINLSSN 207

Query: 138 FQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
             +L++LP  I  +  L  LD S N + ++P  +  +  L+ L L  N L
Sbjct: 208 --HLKSLPAEISRMKKLRHLDCSSNLLESIPPELAGMESLELLYLRRNKL 255



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/158 (35%), Positives = 88/158 (55%), Gaps = 3/158 (1%)

Query: 34  SKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKI 93
           + L  L +S N L+SL   +    +L  L+ + N+L  LP  I  EL NL+ L+++ NK+
Sbjct: 82  TDLTKLIISNNKLQSLADDLRLLPALTVLDIHDNQLTTLPSAIR-ELENLQKLNVSHNKL 140

Query: 94  VILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMS 153
            ILP+ +T+L +L+ L  + N L  +PE  E L +LE L++S N   L T+      L  
Sbjct: 141 KILPEEITNLRNLKSLYLQHNELAVIPEGFEQLSSLEDLDLSNN--RLTTISAGFSSLSG 198

Query: 154 LVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP 191
           LV +++S N + +LP  I  ++KL+ L    N L S P
Sbjct: 199 LVRINLSSNHLKSLPAEISRMKKLRHLDCSSNLLESIP 236



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 12/203 (5%)

Query: 15  VLDVHSNQLKCLPNSIGCLSKLKVL---DVSGNLLESLPKTIENCRSL-EELNANFNKLR 70
           +LD    Q   +P+ +    K  ++   + S N L  +PK I   + +  E+N +FNKL 
Sbjct: 403 LLDYSDKQTTLIPDEVFDAIKNNIIISVNFSKNQLSEIPKRITELKEMVTEVNLSFNKL- 461

Query: 71  QLPDTIGFELINLKTLS---INCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLI 127
                I  EL  L+ L+   +  N +  LP+ +  L  L+V++   N  K LPE L ++ 
Sbjct: 462 ---SCISLELCMLQKLTFLDLRSNFLNSLPEEMKSLIRLQVINLSFNRFKILPEVLYHIP 518

Query: 128 NLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
            LE + IS N Q     P  +  + +L  LD+  N +  +P  +G    L+ L L+GNP 
Sbjct: 519 TLETILISNN-QVGSVDPQKMKTMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGNPF 577

Query: 188 VSPPMDVVEQGLSAVKGYLSEKM 210
             P   ++ +G +A+  YL +++
Sbjct: 578 RVPRAAILMKGTAAILEYLRDRI 600



 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 77/137 (56%), Gaps = 2/137 (1%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           IP+ +T     V  +++  N+L C+   +  L KL  LD+  N L SLP+ +++   L+ 
Sbjct: 440 IPKRITELKEMVTEVNLSFNKLSCISLELCMLQKLTFLDLRSNFLNSLPEEMKSLIRLQV 499

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKI-VILPQSLTHLTSLRVLDARLNCLKSLP 120
           +N +FN+ + LP+ + + +  L+T+ I+ N++  + PQ +  + +L  LD + N L  +P
Sbjct: 500 INLSFNRFKILPEVL-YHIPTLETILISNNQVGSVDPQKMKTMENLTTLDLQNNDLLQIP 558

Query: 121 EDLENLINLEVLNISQN 137
            +L N +NL  L +  N
Sbjct: 559 PELGNCVNLRTLLLDGN 575



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 12/178 (6%)

Query: 39  LDVSGNLLESLPKTIE--NCRSLEELNANFNKLRQLPDTIGFELINLKTLSINCNKIVIL 96
           L++SG  L  +P+ +   N    EE N N   L        +E  +L  L I+ NK+  L
Sbjct: 41  LNLSGRNLSEVPQCVWRINVDVPEEANQN---LSFSTSERWWEQTDLTKLIISNNKLQSL 97

Query: 97  PQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQYLETLPYSIGLLMSLVE 156
              L  L +L VLD   N L +LP  +  L NL+ LN+S N   L+ LP  I  L +L  
Sbjct: 98  ADDLRLLPALTVLDIHDNQLTTLPSAIRELENLQKLNVSHN--KLKILPEEITNLRNLKS 155

Query: 157 LDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKGYLSEKMNNDH 214
           L + +N++  +P+    L  L+ L L  N L +     +  G S++ G +   ++++H
Sbjct: 156 LYLQHNELAVIPEGFEQLSSLEDLDLSNNRLTT-----ISAGFSSLSGLVRINLSSNH 208


>gi|443730785|gb|ELU16143.1| hypothetical protein CAPTEDRAFT_182426 [Capitella teleta]
          Length = 610

 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 138/299 (46%), Gaps = 51/299 (17%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +PE+L  +L N+  L++  N LK LP SI  L +L+ L +  N LE+LP+ I     LEE
Sbjct: 122 LPEAL-CQLENLQKLNLSHNSLKALPESICQLPRLQFLYIQNNQLEALPEDIGRLALLEE 180

Query: 62  LNANFNKLRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPE 121
           L+A+ NKL  LP +I F L  +   +++ N + ++   ++ +  LR LDA  N L +LP+
Sbjct: 181 LDASHNKLPTLPTSIKF-LERVMKFNMSNNNLNVIVHEISGMQGLRTLDATHNQLHTLPD 239

Query: 122 DLENLINLEVLNISQN-------FQY---------------------------------- 140
           DL +L  LE L +  N        Q+                                  
Sbjct: 240 DLGHLNKLEQLYLRHNRLTHLPSLQHCTALKELHLGNNAIQGLSEEQLREMHSVSVLDLR 299

Query: 141 ---LETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPMDVVEQ 197
              L  +P  I LL  L  LD++ N I+ LP  +G L  L+ + L+GNPL S   D++ +
Sbjct: 300 DNRLTKVPSEIVLLQMLERLDLTNNNISALPYELGTLPNLKSIVLDGNPLKSIRRDIIMR 359

Query: 198 GLSAVKGYLSEKMNNDHKSPKKKSWVGKLVKYGTFNGALRNHRSEERERFIMSDFRAID 256
           G + +K YL  +M     +  + +        G   GA     S   +  ++S  +A+D
Sbjct: 360 GTNELKKYLRSRMAESAPTAPQSAVQSSKGTSGIVGGA-----SSGVDPHLVSSSKALD 413



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 68/202 (33%), Positives = 105/202 (51%), Gaps = 10/202 (4%)

Query: 20  SNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQLPDTIGFE 79
           SN L  L   I  L  L VLDV  N L SLP+ +    +L++LN + N L+ LP++I  +
Sbjct: 93  SNALTSLSEDIAQLPALTVLDVHDNQLNSLPEALCQLENLQKLNLSHNSLKALPESI-CQ 151

Query: 80  LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLNISQNFQ 139
           L  L+ L I  N++  LP+ +  L  L  LDA  N L +LP  ++ L  +   N+S N  
Sbjct: 152 LPRLQFLYIQNNQLEALPEDIGRLALLEELDASHNKLPTLPTSIKFLERVMKFNMSNN-- 209

Query: 140 YLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPP-------M 192
            L  + + I  +  L  LD ++N++ TLPD +G L KL++L L  N L   P       +
Sbjct: 210 NLNVIVHEISGMQGLRTLDATHNQLHTLPDDLGHLNKLEQLYLRHNRLTHLPSLQHCTAL 269

Query: 193 DVVEQGLSAVKGYLSEKMNNDH 214
             +  G +A++G   E++   H
Sbjct: 270 KELHLGNNAIQGLSEEQLREMH 291



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 6/200 (3%)

Query: 15  VLDVHSNQLKCLPNSIGCLSK---LKVLDVSGNLLESLPKTIENCR-SLEELNANFNKLR 70
            LD    ++  +P+ +  +++   + +++ S N L   PK IE+ + SL ELN +FNKL 
Sbjct: 411 ALDYSEKKVTAIPDELWAVAQSGGVTIVNFSKNQLTQYPKQIESLKDSLCELNLSFNKLT 470

Query: 71  QLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLE 130
            +  +IG  L  L  L +  N+++ LP  L++ +SLR L    N   S+P  + +L  LE
Sbjct: 471 TIDASIGC-LSRLVMLDLGGNQLLSLPAELSNASSLRELVISFNRFTSIPSVVYSLPCLE 529

Query: 131 VLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSP 190
           ++    N Q  E     +  L  L  LD+  N I  +P  +G + +L+ L LEGN +  P
Sbjct: 530 IILAGSN-QIAEIDAQGLKSLAQLATLDLQNNDIRQVPPELGLVTQLRSLQLEGNAIRQP 588

Query: 191 PMDVVEQGLSAVKGYLSEKM 210
              ++ +G  A+  YL  ++
Sbjct: 589 RPAILSKGTLAILEYLRGRI 608



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 81/176 (46%), Gaps = 28/176 (15%)

Query: 74  DTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVLN 133
           D   +E ++L  L +  N +  L + +  L +L VLD   N L SLPE L  L NL+ LN
Sbjct: 77  DERWWEQVDLSKLILASNALTSLSEDIAQLPALTVLDVHDNQLNSLPEALCQLENLQKLN 136

Query: 134 ISQN----------------FQY-----LETLPYSIGLLMSLVELDVSYNKITTLPDSIG 172
           +S N                F Y     LE LP  IG L  L ELD S+NK+ TLP SI 
Sbjct: 137 LSHNSLKALPESICQLPRLQFLYIQNNQLEALPEDIGRLALLEELDASHNKLPTLPTSIK 196

Query: 173 CLRKLQKLSLEGNPLVSPPMDVVEQGLSAVKG--YLSEKMNNDHKSPKKKSWVGKL 226
            L ++ K ++  N L     +V+   +S ++G   L    N  H  P     + KL
Sbjct: 197 FLERVMKFNMSNNNL-----NVIVHEISGMQGLRTLDATHNQLHTLPDDLGHLNKL 247



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 29/210 (13%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V VLD+  N+L  +P+ I  L  L+ LD++ N + +LP  +    +L+ +  + N L+ 
Sbjct: 292 SVSVLDLRDNRLTKVPSEIVLLQMLERLDLTNNNISALPYELGTLPNLKSIVLDGNPLKS 351

Query: 72  LPDTIGFELIN-LKTL--SINCNKIVILPQSLTH--------------------LTSLRV 108
           +   I     N LK    S         PQS                       ++S + 
Sbjct: 352 IRRDIIMRGTNELKKYLRSRMAESAPTAPQSAVQSSKGTSGIVGGASSGVDPHLVSSSKA 411

Query: 109 LDARLNCLKSLPEDLENLIN---LEVLNISQNFQYLETLPYSI-GLLMSLVELDVSYNKI 164
           LD     + ++P++L  +     + ++N S+N   L   P  I  L  SL EL++S+NK+
Sbjct: 412 LDYSEKKVTAIPDELWAVAQSGGVTIVNFSKN--QLTQYPKQIESLKDSLCELNLSFNKL 469

Query: 165 TTLPDSIGCLRKLQKLSLEGNPLVSPPMDV 194
           TT+  SIGCL +L  L L GN L+S P ++
Sbjct: 470 TTIDASIGCLSRLVMLDLGGNQLLSLPAEL 499



 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 2/106 (1%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +V+LD+  NQL  LP  +   S L+ L +S N   S+P  + +   LE + A  N++ ++
Sbjct: 482 LVMLDLGGNQLLSLPAELSNASSLRELVISFNRFTSIPSVVYSLPCLEIILAGSNQIAEI 541

Query: 73  PDTIGFE-LINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLK 117
            D  G + L  L TL +  N I  +P  L  +T LR L    N ++
Sbjct: 542 -DAQGLKSLAQLATLDLQNNDIRQVPPELGLVTQLRSLQLEGNAIR 586


>gi|417771112|ref|ZP_12419008.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418682322|ref|ZP_13243541.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|418716599|ref|ZP_13276562.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|400325980|gb|EJO78250.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409946737|gb|EKN96745.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|410787370|gb|EKR81102.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|455666526|gb|EMF31940.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 246

 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 103/182 (56%), Gaps = 5/182 (2%)

Query: 13  VVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQL 72
           +V +  ++N ++   NS    S +++L ++G   ++LP+ I N ++L ELN   N L  +
Sbjct: 34  IVEVKAYTNLIEAFQNS----SDVRILHLNGQGFKNLPRQIGNLQNLTELNLGSNSLTTV 89

Query: 73  PDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSLPEDLENLINLEVL 132
           P  IG  L NL++L +  N +  LP+ +  L +L  L    N L +LP+++  L NL+VL
Sbjct: 90  PKEIG-RLRNLQSLWLFGNWLATLPEEVGELHNLEELSLSRNLLITLPKEIRRLQNLQVL 148

Query: 133 NISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPLVSPPM 192
           N+S N      LP  IG L +L EL++  N +TT+P  IG LR L+ L L  N L + P 
Sbjct: 149 NLSDNRPTFTVLPKEIGELRNLKELNLENNSLTTIPKEIGKLRNLKWLRLGSNSLTTLPK 208

Query: 193 DV 194
           ++
Sbjct: 209 EI 210



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 100/178 (56%), Gaps = 5/178 (2%)

Query: 12  NVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFNKLRQ 71
           +V +L ++    K LP  IG L  L  L++  N L ++PK I   R+L+ L    N L  
Sbjct: 52  DVRILHLNGQGFKNLPRQIGNLQNLTELNLGSNSLTTVPKEIGRLRNLQSLWLFGNWLAT 111

Query: 72  LPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLN--CLKSLPEDLENLINL 129
           LP+ +G EL NL+ LS++ N ++ LP+ +  L +L+VL+   N      LP+++  L NL
Sbjct: 112 LPEEVG-ELHNLEELSLSRNLLITLPKEIRRLQNLQVLNLSDNRPTFTVLPKEIGELRNL 170

Query: 130 EVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKITTLPDSIGCLRKLQKLSLEGNPL 187
           + LN+  N   L T+P  IG L +L  L +  N +TTLP  IG LR L++L L  N L
Sbjct: 171 KELNLENN--SLTTIPKEIGKLRNLKWLRLGSNSLTTLPKEIGKLRNLKELDLSSNSL 226



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 91/160 (56%), Gaps = 5/160 (3%)

Query: 8   ARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEELNANFN 67
             L N+  L++ SN L  +P  IG L  L+ L + GN L +LP+ +    +LEEL+ + N
Sbjct: 71  GNLQNLTELNLGSNSLTTVPKEIGRLRNLQSLWLFGNWLATLPEEVGELHNLEELSLSRN 130

Query: 68  KLRQLPDTIGFELINLKTLSINCNK--IVILPQSLTHLTSLRVLDARLNCLKSLPEDLEN 125
            L  LP  I   L NL+ L+++ N+    +LP+ +  L +L+ L+   N L ++P+++  
Sbjct: 131 LLITLPKEIR-RLQNLQVLNLSDNRPTFTVLPKEIGELRNLKELNLENNSLTTIPKEIGK 189

Query: 126 LINLEVLNISQNFQYLETLPYSIGLLMSLVELDVSYNKIT 165
           L NL+ L +  N   L TLP  IG L +L ELD+S N ++
Sbjct: 190 LRNLKWLRLGSN--SLTTLPKEIGKLRNLKELDLSSNSLS 227



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 79/138 (57%), Gaps = 4/138 (2%)

Query: 2   IPESLTARLLNVVVLDVHSNQLKCLPNSIGCLSKLKVLDVSGNLLESLPKTIENCRSLEE 61
           +P+ +  RL N+  L +  N L  LP  +G L  L+ L +S NLL +LPK I   ++L+ 
Sbjct: 89  VPKEI-GRLRNLQSLWLFGNWLATLPEEVGELHNLEELSLSRNLLITLPKEIRRLQNLQV 147

Query: 62  LNANFNK--LRQLPDTIGFELINLKTLSINCNKIVILPQSLTHLTSLRVLDARLNCLKSL 119
           LN + N+     LP  IG EL NLK L++  N +  +P+ +  L +L+ L    N L +L
Sbjct: 148 LNLSDNRPTFTVLPKEIG-ELRNLKELNLENNSLTTIPKEIGKLRNLKWLRLGSNSLTTL 206

Query: 120 PEDLENLINLEVLNISQN 137
           P+++  L NL+ L++S N
Sbjct: 207 PKEIGKLRNLKELDLSSN 224


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.319    0.136    0.389 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,190,395,903
Number of Sequences: 23463169
Number of extensions: 163622489
Number of successful extensions: 737505
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8868
Number of HSP's successfully gapped in prelim test: 24438
Number of HSP's that attempted gapping in prelim test: 469690
Number of HSP's gapped (non-prelim): 136158
length of query: 281
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 140
effective length of database: 9,050,888,538
effective search space: 1267124395320
effective search space used: 1267124395320
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)