Query 023497
Match_columns 281
No_of_seqs 165 out of 1402
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 07:50:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023497.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023497hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jov_A HI1317; hypothetical pr 100.0 1.2E-48 4.2E-53 347.8 22.3 226 9-260 18-269 (270)
2 2cir_A Hexose-6-phosphate muta 100.0 2.8E-48 9.6E-53 349.9 21.9 228 29-263 50-290 (297)
3 2hta_A Putative enzyme related 100.0 2.6E-47 8.8E-52 345.5 23.6 243 9-262 38-307 (309)
4 3k25_A SLR1438 protein; struct 100.0 1.8E-46 6.3E-51 336.9 24.9 234 8-263 7-288 (289)
5 3dcd_A Galactose mutarotase re 100.0 6.5E-38 2.2E-42 283.4 24.8 232 10-264 17-294 (307)
6 3q1n_A Galactose mutarotase re 100.0 2E-37 7E-42 278.6 26.2 231 9-261 16-293 (294)
7 3mwx_A Aldose 1-epimerase; str 100.0 6.2E-37 2.1E-41 279.3 20.3 212 33-264 61-324 (326)
8 3os7_A Galactose mutarotase-li 100.0 1E-36 3.5E-41 279.5 21.2 212 33-263 68-340 (341)
9 3nre_A Aldose 1-epimerase; str 100.0 6.7E-36 2.3E-40 268.3 22.8 206 33-263 42-290 (291)
10 1yga_A Hypothetical 37.9 kDa p 100.0 1.4E-34 4.7E-39 265.4 19.1 217 30-262 53-341 (342)
11 1snz_A Aldose 1-epimerase; mut 100.0 1.6E-33 5.6E-38 258.4 18.3 216 30-262 68-342 (344)
12 1lur_A Aldose 1-epimerase; vit 100.0 2.1E-29 7.1E-34 230.7 17.9 232 10-263 30-337 (339)
13 1nsx_A Galactose mutarotase; e 100.0 3.4E-28 1.2E-32 223.2 19.3 208 40-264 63-339 (347)
14 1z45_A GAL10 bifunctional prot 99.9 1.7E-26 6E-31 229.4 20.8 210 39-261 424-698 (699)
15 3imh_A Galactose-1-epimerase; 99.9 3E-26 1E-30 209.0 20.3 211 40-264 69-332 (338)
16 3ty1_A Hypothetical aldose 1-e 99.8 9E-20 3.1E-24 169.1 16.9 196 52-264 133-354 (384)
17 4ep8_B Urease subunit beta; al 86.0 0.72 2.5E-05 33.5 3.7 41 104-147 12-52 (101)
18 4ubp_B Protein (urease (chain 80.6 1.2 4.1E-05 33.7 3.1 41 104-147 18-58 (126)
19 4ac7_B Urease subunit beta; hy 80.6 1.2 4.1E-05 33.7 3.1 41 104-147 18-58 (126)
20 3isy_A Bsupi, intracellular pr 77.8 5 0.00017 30.2 5.9 33 98-130 6-38 (120)
21 3qga_A UREA2, fusion of urease 63.3 3.9 0.00013 34.0 2.5 41 104-147 117-157 (225)
22 1e9y_A Urease subunit alpha; h 61.3 4.1 0.00014 34.1 2.3 41 104-147 117-157 (238)
23 1yew_A Particulate methane mon 60.4 8.8 0.0003 34.4 4.4 28 101-128 255-282 (382)
24 3rfr_A PMOB; membrane, oxidore 59.3 8.4 0.00029 34.9 4.1 28 101-128 289-316 (419)
25 3bs6_A Inner membrane protein 49.3 58 0.002 27.7 7.8 44 78-129 91-136 (280)
26 4fnq_A Alpha-galactosidase AGA 46.4 49 0.0017 32.5 7.7 57 78-141 130-188 (729)
27 4gy7_A Urease; JACK bean, hydr 46.4 13 0.00044 37.4 3.5 31 104-136 143-173 (840)
28 2wnx_A Glycoside hydrolase, fa 43.1 49 0.0017 26.2 5.9 33 110-142 27-60 (170)
29 3zqx_A Cellulose 1,4-beta-cell 42.4 50 0.0017 25.5 5.7 46 101-146 3-54 (146)
30 2yfo_A Alpha-galactosidase-suc 42.0 59 0.002 31.9 7.5 56 78-140 130-187 (720)
31 3blc_A Inner membrane protein 40.6 96 0.0033 27.0 8.0 42 79-128 123-166 (330)
32 2xbt_A Cellulosomal scaffoldin 40.2 38 0.0013 26.6 4.7 34 110-143 24-58 (160)
33 2xn2_A Alpha-galactosidase; hy 36.0 60 0.0021 31.9 6.5 55 79-140 135-191 (732)
34 3zuc_A Cellulosomal scaffoldin 34.8 64 0.0022 25.1 5.2 33 110-142 20-53 (153)
35 2ys4_A Hydrocephalus-inducing 34.5 31 0.0011 25.3 3.3 39 101-139 32-70 (122)
36 3mi6_A Alpha-galactosidase; NE 33.5 96 0.0033 30.6 7.4 55 78-139 131-187 (745)
37 2ab9_A Pro-SFTI-1; protein, be 31.3 8.7 0.0003 20.7 -0.2 6 39-44 22-27 (31)
38 2kl8_A OR15; structural genomi 30.8 44 0.0015 22.1 3.1 20 98-117 28-47 (85)
39 1cv8_A Staphopain; cysteine pr 27.7 1.2E+02 0.004 24.2 5.6 40 204-259 132-171 (174)
40 1pxv_A Cysteine protease; hydr 27.6 46 0.0016 26.7 3.3 48 196-259 129-180 (183)
41 3ndz_E Endoglucanase D; cellot 27.3 82 0.0028 22.8 4.4 35 102-139 4-41 (107)
42 1f2r_I Inhibitor of caspase-ac 25.2 17 0.00057 26.4 0.2 20 233-254 76-95 (100)
43 1g43_A Scaffolding protein; be 24.9 75 0.0026 24.8 4.1 32 110-141 20-52 (160)
44 4b9f_A Cellulosomal-scaffoldin 22.7 1.5E+02 0.0051 22.9 5.4 31 110-140 16-47 (152)
45 2x3c_A Toxic extracellular end 22.6 91 0.0031 27.6 4.6 19 110-128 36-54 (343)
46 1k1x_A 4-alpha-glucanotransfer 22.2 1E+02 0.0035 29.9 5.3 31 96-126 540-570 (659)
47 2e6j_A Hydin protein; PAPD, st 22.2 1.8E+02 0.0061 20.3 5.5 23 108-130 24-46 (112)
48 2x5c_A Hypothetical protein OR 21.4 80 0.0027 22.4 3.2 26 2-27 63-88 (131)
49 2jny_A Uncharacterized BCR; st 21.4 18 0.00061 24.2 -0.2 15 34-48 39-53 (67)
No 1
>1jov_A HI1317; hypothetical protein, structure 2 function project, S2F, structural genomics, unknown function; 1.57A {Haemophilus influenzae} SCOP: b.30.5.7
Probab=100.00 E-value=1.2e-48 Score=347.79 Aligned_cols=226 Identities=27% Similarity=0.477 Sum_probs=190.2
Q ss_pred CCCCcEEEEECCCcceEEE--------------------------EecCCCCCcCCcceEccccCCCCCCccceeeeccC
Q 023497 9 KDGLPRIILTEPTGSSAES--------------------------FWKPPKAIRGGIPVCFPQFGNLGLLEQHGFARNRF 62 (281)
Q Consensus 9 ~~~l~~~~l~~~~g~~~~v--------------------------~~~~~~~irgGiPv~fP~~G~~~~~p~HGfaR~~~ 62 (281)
.+|++.++|+++.+ +|+| .|++.++||||+||||||||++ .+|+|||||++.
T Consensus 18 ~~~~~~~~l~~~~~-~a~i~~~Ga~l~s~~~~~~g~e~Lw~~~~~~~~~~~~irGGiPvlfP~~gr~-~~~~HGfaR~~~ 95 (270)
T 1jov_A 18 HNDIPVLHLKHAVG-TAKISLQGAQLISWKPQNAKQDVLWLSEVEPFKNGNAIRGGVPICYPWFGGV-KQPAHGTARIRL 95 (270)
T ss_dssp ETTEEEEEEEETTE-EEEEETBTTEEEEEEETTCSSCSBCBCTTCCCCTTSCCSBSCCEEBSSCGGG-SSSTTBSGGGSB
T ss_pred eCCceEEEEeCCCc-EEEEECCCCEEEEEEECCCCceEEEECcHHhcCCCCCccCccEEEEeccCCC-CCCCCceecCCC
Confidence 68889999998875 5777 3577789999999999999995 579999999999
Q ss_pred eEEeecCCCCCCCCCccEEEEEecCChhhhccCCcceEEEEEEEEeCCeeEEEEEEEeCCCCceeeeecCcceeecCCCC
Q 023497 63 WSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFELRLRISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVSDIS 142 (281)
Q Consensus 63 W~v~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~~~~L~~~~L~~~l~v~N~g~~~~~f~~g~HpYF~v~~~~ 142 (281)
|+|++... +++...++|.|.+++ +.|+++++|+|. |+++++|+|+|++ ||++|+||||++++++
T Consensus 96 W~v~~~~~----~~~~v~l~~~l~~~~-------~~f~l~~~~~L~---l~~~~~v~N~g~~--p~~~g~HpyF~v~d~~ 159 (270)
T 1jov_A 96 WQLSHYYI----SVHKVRLEFELFSDL-------NIIEAKVSMVFT---DKCHLTFTHYGEE--SAQAALHTYFNIGDIN 159 (270)
T ss_dssp CEEEEEEE----ETTEEEEEEEEECTT-------SCEEEEEEEEES---SSEEEEEEECCSS--CEEEEECCEEECSCGG
T ss_pred cEEeeecc----CCCcEEEEEEECCCc-------cccEEEEEEEEC---CeEEEEEEeCCch--hHhhhcccceecCCcc
Confidence 99997631 123456788887643 358999999995 8999999999986 6899999999999988
Q ss_pred eeEEEcCCCCccccccCccccccccCceEEeccCcceEEcCCCCeEEEEeCCCCcEEEEEecCCCcEEEeCCcccccccC
Q 023497 143 EVRVEGLETLDYFDYLMNKERFTEQADAITFDGEIDRVYLSTPTKIAIIDHEKKRTFELRKDGMPDSVVWNPWDKKAKAL 222 (281)
Q Consensus 143 ~~~v~gl~~~~~~d~l~~~~~~~~~~~~l~~~~~~D~vy~~~~~~~~l~~~~~~~~i~i~~~~~~~~vvwnP~~~~~~~~ 222 (281)
+++|.|+.+ .|+|+++..... ..+.+.+++++|++|.++++.++|.+++.+++|+|++++++++||||||. ++|
T Consensus 160 ~~~v~g~~~-~~~d~l~~~~~~--~~~~~~~~~~~D~vy~~~~~~~~i~d~~~~~~i~v~~~~~~~~vvWnP~~---~~~ 233 (270)
T 1jov_A 160 QVEVQGLPE-TCFNSLNQQQEN--VPSPRHISENVDCIYSAENMQNQILDKSFNRTIALHHHNASQFVLWNPWH---KKT 233 (270)
T ss_dssp GEEEESCCS-EEEETTTTEEEE--CCSSBCCSSCEEEEEECSSSEEEEEETTTTEEEEEEEESCSEEEEEECTT---SCC
T ss_pred eEEEECCCC-cceeccCCcccc--cCCcccCCCCccceeCCCCCCEEEEECCCCcEEEEEEcCCCeEEEECCCc---ccc
Confidence 999999954 788887653322 33467888899999998878899999999999999999999999999984 469
Q ss_pred CCCCCCCCcceEEecccccCCCeEeCCCCEEEEEEEEE
Q 023497 223 PDMGVDGYKTMLCVDSAAIENPIVLKPFEEWRGRQELS 260 (281)
Q Consensus 223 ~d~~~~~~~~~vCvEp~~~~~~~~L~pge~~~~~~~i~ 260 (281)
.||++++|++||||||+++ .+.|+|||+++.+++|+
T Consensus 234 ~d~~~~~~~~fvCvEp~~~--~~~L~PGe~~~~~~~i~ 269 (270)
T 1jov_A 234 SGMSETGYQKMLCLETARI--HHLLEFGESLSVEISLK 269 (270)
T ss_dssp TTCCTTGGGGEEEEEEEEE--EEEECTTCEEEEEEEEC
T ss_pred cccccccCccEEEeCcccc--ceEECCCCEEEEEEEEE
Confidence 9999999999999999875 57999999998888774
No 2
>2cir_A Hexose-6-phosphate mutarotase; hypothetical protein, isomerase; HET: BG6; 1.60A {Saccharomyces cerevisiae} PDB: 2ciq_A* 2cis_A*
Probab=100.00 E-value=2.8e-48 Score=349.87 Aligned_cols=228 Identities=31% Similarity=0.623 Sum_probs=195.0
Q ss_pred ecCCCCCcCCcceEccccCCCC------CCccceeeeccCeEEeecCCCCCCCCCccEEEEEecC---ChhhhccCCcce
Q 023497 29 WKPPKAIRGGIPVCFPQFGNLG------LLEQHGFARNRFWSLDEDASPLPPANNQSTVDLILKS---TEEDIKAWPRGF 99 (281)
Q Consensus 29 ~~~~~~irgGiPv~fP~~G~~~------~~p~HGfaR~~~W~v~~~~~~~~~~~~~~~v~l~l~~---~~~~~~~~P~~f 99 (281)
|.+.+++|||+|+|||||||+. .+++|||+|++.|++++.. +++..+|+|.|.+ +++++++|||+|
T Consensus 50 ~~~~~~~~GGip~l~P~~gr~~~~~~~y~l~~HGfar~~~W~v~~~~-----~~~~~~v~l~l~s~~~~~~~~~g~P~~~ 124 (297)
T 2cir_A 50 LDGSKPVRGGIPLVFPVFGKNSTDEHLSKLPQHGLARNSTWEFLGQT-----KENPPTVQFGLKPEIANPELTKLWPMDY 124 (297)
T ss_dssp CSSSSCCSBSBCEEBSCSSCCSSSTTGGGSCTTBSGGGSBCEEEEEE-----EETTEEEEEEECGGGSCHHHHHHSCCCC
T ss_pred hcCCCCccCCCCEEEEecCCCCCCcccCCCCCccccCCCceEEEeec-----cCCceEEEEEecCCCCCHHHHhhCCCcE
Confidence 5667889999999999999974 7899999999999998652 0123679999988 788899999999
Q ss_pred EEEEEEEEeCCeeEEEEEEEeCC-CCceeeeecCcceeecCCCCeeEEEcCCCCccccccCccccccccCceEEeccCcc
Q 023497 100 ELRLRISISPGKLTLIPRVRNVD-NKAFSFMFALRNYLSVSDISEVRVEGLETLDYFDYLMNKERFTEQADAITFDGEID 178 (281)
Q Consensus 100 ~l~~~~~L~~~~L~~~l~v~N~g-~~~~~f~~g~HpYF~v~~~~~~~v~gl~~~~~~d~l~~~~~~~~~~~~l~~~~~~D 178 (281)
+++++|+|.+++|+++++++|++ +++|||++|+||||+++++.++.+.|+++..|+|.... .......+.+.+.+++|
T Consensus 125 ~~~vty~L~~~~L~i~~~~~N~~~d~~~~~~~~~H~YFnl~~~~~~~~~gv~~~~~~d~~~~-~~~~~~~~~~~~~~~~D 203 (297)
T 2cir_A 125 LLILTVELGSDYLKTAIEVENTSSSKELKFNWLFHTYFRIEDIEGTMVSNLAGMKLYDQLLK-ESYVDKHPVVTFNQETD 203 (297)
T ss_dssp EEEEEEEECSSEEEEEEEEECCCSSCCEEEEEEECCEEECSCGGGEEEESCTTCEEEETTTT-EEEECCSSSBCCSSCEE
T ss_pred EEEEEEEEcCCEEEEEEEEEcCCCCcceEEeeecCceEeCCCccceEEecCCCCccEeccCC-ccccccCCccccCCccc
Confidence 99999999989999999999999 99999999999999999888888888877668886533 22222334577778899
Q ss_pred eEEcCCC--CeEEEEeCCCCcEEEEEecCCCcEEEeCCcccccccCCCC-CCCCCcceEEecccccCCCeEeCCCCEEEE
Q 023497 179 RVYLSTP--TKIAIIDHEKKRTFELRKDGMPDSVVWNPWDKKAKALPDM-GVDGYKTMLCVDSAAIENPIVLKPFEEWRG 255 (281)
Q Consensus 179 ~vy~~~~--~~~~l~~~~~~~~i~i~~~~~~~~vvwnP~~~~~~~~~d~-~~~~~~~~vCvEp~~~~~~~~L~pge~~~~ 255 (281)
++|...+ ..++|.++ ++++|+|.++++|.+|||||+.++++.|.|+ ++.+|++|||||||+..+.++|+|||+++.
T Consensus 204 ~~~~~~~~~~~~~l~~~-~g~~l~v~~~~~p~~~v~t~~~~~~~~~~~~~~~~~~~~~vClEp~~~~~~~~L~pGe~~~~ 282 (297)
T 2cir_A 204 VIYQNVSAERAIQIVDK-GVQIHTLKRYNLPDTVVWNPWIEKSQGMADFEPKTGYQQMICIEPGHVHDFISLAPGKKWNA 282 (297)
T ss_dssp EEECCCCTTCCEEEEET-TEEEEEEEEESCCEEEEEECHHHHHHHCTTCCSTTGGGGEEEEEEEEEEEEEEECTTCEEEE
T ss_pred eEEeCCCCCccEEEEcC-CCCEEEEEecCCCcEEEECcchhhccccccCCCccccccEEEECceECCCCEEECCCCeEEE
Confidence 9997654 57889998 9999999998899999999986666778887 667789999999999888999999999999
Q ss_pred EEEEEEEe
Q 023497 256 RQELSTVS 263 (281)
Q Consensus 256 ~~~i~~~~ 263 (281)
+++|++.+
T Consensus 283 ~~~~~~~~ 290 (297)
T 2cir_A 283 YQLLCKEE 290 (297)
T ss_dssp EEEEECC-
T ss_pred EEEEEEEe
Confidence 99999864
No 3
>2hta_A Putative enzyme related to aldose 1-epimerase; carbohydrate, MU YEAD, GALM, sugar phosphate, isomerase; 1.90A {Salmonella typhimurium} PDB: 2htb_A
Probab=100.00 E-value=2.6e-47 Score=345.50 Aligned_cols=243 Identities=30% Similarity=0.475 Sum_probs=207.2
Q ss_pred CCCCcEEEEECCCcceEEE-------------------------EecCCCCCcCCcceEccccCCCC--CCccceeeecc
Q 023497 9 KDGLPRIILTEPTGSSAES-------------------------FWKPPKAIRGGIPVCFPQFGNLG--LLEQHGFARNR 61 (281)
Q Consensus 9 ~~~l~~~~l~~~~g~~~~v-------------------------~~~~~~~irgGiPv~fP~~G~~~--~~p~HGfaR~~ 61 (281)
.+|++.++|++.. .+|+| .|.+.+++|||+|+||||+||+. .+++|||||++
T Consensus 38 ~~~~~~~~L~n~~-~~a~I~~~GA~l~s~~~~~g~evL~~~~~~~~~~~~~~~GG~pil~P~~gRi~~g~~~~HGfar~~ 116 (309)
T 2hta_A 38 LDDLDLIVVDHPQ-VKASFALQGAHLLSWKPVGEEEVLWLSNNTPFKTGVALRGGVPICWPWFGPAAQQGLPSHGFARNL 116 (309)
T ss_dssp ETTEEEEEEEETT-EEEEEETBTTEEEEEEETTSCCCBCBCTTCCCCTTCCCSBSBCEEBSCCSSCSSTTCCTTBSGGGS
T ss_pred cCCceEEEEeCCC-eEEEEeccCcEEEEEEeCCCCEEEeCCchHhccCCCCeeccceEEEecCCCCCCCCCCCccCcCCC
Confidence 5677777777764 45565 35567889999999999999974 57999999999
Q ss_pred CeEEeecCCCCCCCCCccEEEEEecCChhhhccCCcceEEEEEEEEeCCeeEEEEEEEeCCCCceeeeecCcceeecCCC
Q 023497 62 FWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFELRLRISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVSDI 141 (281)
Q Consensus 62 ~W~v~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~~~~L~~~~L~~~l~v~N~g~~~~~f~~g~HpYF~v~~~ 141 (281)
.|++++... +++..+|+|+|.++++++++|||+|+++++|+| +++|+++++++| ++||++|+||||+++++
T Consensus 117 ~W~v~~~~~----~~~~~~v~l~l~s~~~~~~gyP~~~~l~vty~L-~~~L~i~~~~~N----~~~~~~g~H~YFnl~~~ 187 (309)
T 2hta_A 117 PWALKAHNE----DDNGVMLTFELQSSEATRKYWPHDFTLLARFKV-GKTCEIELEAHG----EFATTSALHSYFNVGDI 187 (309)
T ss_dssp BCEEEEEEE----CSSCEEEEEEEECCHHHHHHSCCCCEEEEEEEE-SSSEEEEEEEES----SEEEEEEECCEEECSCG
T ss_pred ceEEEeEec----CCCceEEEEEeCCChHHhhcCCCceEEEEEEEE-CCceEEEEEEEC----CeEehhcCCceEecCCc
Confidence 999987631 122367999999988889999999999999999 999999999998 89999999999999987
Q ss_pred CeeEEEcCCCCccccccCccccccccCceEEeccCcceEEcCCCCeEEEEeCCCCcEEEEEecCCCcEEEeCCccccccc
Q 023497 142 SEVRVEGLETLDYFDYLMNKERFTEQADAITFDGEIDRVYLSTPTKIAIIDHEKKRTFELRKDGMPDSVVWNPWDKKAKA 221 (281)
Q Consensus 142 ~~~~v~gl~~~~~~d~l~~~~~~~~~~~~l~~~~~~D~vy~~~~~~~~l~~~~~~~~i~i~~~~~~~~vvwnP~~~~~~~ 221 (281)
.++++.++ +..|+|+++.+.........+.|.+++|++|.+.+..++|.++.++++|+|.++++|.+||||||.++++.
T Consensus 188 ~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~df~~~~D~~~~~~~~~~~l~~~~~g~~l~v~~~~~p~~~vwtp~~~~~~~ 266 (309)
T 2hta_A 188 ANVKVSGL-GDRFIDKVNDAKEGVLTDGIQTFPDRTDRVYLNPEACSVIHDATLNRTIDVVHHHHLNVVGWNPGPALSVS 266 (309)
T ss_dssp GGCEEECC-CSEEEETTTTTEEEECSSSCEECSSCEEEEESSCCSEEEEEETTTTEEEEEEEESCSEEEEEECHHHHHHH
T ss_pred cceEEECC-CCceEeccCCcccccccCCceecCCccCcEEeCCCCCEEEEeCCCCcEEEEEECCCCcEEEECCCcccccc
Confidence 77888887 67788876654443334566889899999998665678999999999999999889999999998666778
Q ss_pred CCCCCCCCCcceEEecccccCCCeEeCCCCEEEEEEEEEEE
Q 023497 222 LPDMGVDGYKTMLCVDSAAIENPIVLKPFEEWRGRQELSTV 262 (281)
Q Consensus 222 ~~d~~~~~~~~~vCvEp~~~~~~~~L~pge~~~~~~~i~~~ 262 (281)
|.|+++++|+.|||||||+..+.++|+|||+++.+++|++.
T Consensus 267 ~~d~~~~~~~~~vClEp~~~~~~~~L~PGe~~~~~~~~~~~ 307 (309)
T 2hta_A 267 MGDMPDDGYKTFVCVETVYATAPQQATEEKPSRLAQTICVA 307 (309)
T ss_dssp CTTSCTTGGGGEEEEEEEEEEEEEEEBTTBCEEEEEEEEEE
T ss_pred cccCCccccccEEEECeeecCCCEEECCCCeEEEEEEEEEe
Confidence 99998888999999999999889999999999999999986
No 4
>3k25_A SLR1438 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, SGR112, P73504_SYNY3; 2.55A {Synechocystis SP}
Probab=100.00 E-value=1.8e-46 Score=336.88 Aligned_cols=234 Identities=21% Similarity=0.381 Sum_probs=193.1
Q ss_pred CCCCCcEEEEECCC-cceEEE------------------Ee-------cCCCCCcCCcceEccccCCC-----------C
Q 023497 8 DKDGLPRIILTEPT-GSSAES------------------FW-------KPPKAIRGGIPVCFPQFGNL-----------G 50 (281)
Q Consensus 8 ~~~~l~~~~l~~~~-g~~~~v------------------~~-------~~~~~irgGiPv~fP~~G~~-----------~ 50 (281)
..++++.++|.|+. |.++.| +| +++++||||+|+||||+||+ |
T Consensus 7 ~~~~~~~~~l~n~~~g~~~~v~~~~Ga~l~s~~~~g~~~l~~~~~~~~~~~~~~~gg~Pvl~P~~gri~~g~~~~~g~~y 86 (289)
T 3k25_A 7 TPDRPLTYHLEDDQSLARLSLVPGRGGLVTEWTVQGQPILYFDRERFQDPSLSVRGGIPILFPICGNLPQDQFNHAGKSY 86 (289)
T ss_dssp ECCBCCEEEEEETTTTEEEEEEGGGTSEEEEEEETTEECBCBCTTGGGSTTSCCCBSBCEEBSCSSCCGGGEEEETTEEE
T ss_pred ccCCceEEEEECCCCCeEEEeehhcCCEEEEEEeCCEEEEecChhhccCcccccCCCCCEEECCCCCCCCCEEEECCEEe
Confidence 35788888888874 655555 32 34457999999999999997 3
Q ss_pred CCccceeeeccCeEEeecCCCCCCCCCccEEEEEecCChhhhccCCcceEEEEEEEEeCCeeEEEEEEEeCCCCceeeee
Q 023497 51 LLEQHGFARNRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFELRLRISISPGKLTLIPRVRNVDNKAFSFMF 130 (281)
Q Consensus 51 ~~p~HGfaR~~~W~v~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~~~~L~~~~L~~~l~v~N~g~~~~~f~~ 130 (281)
.+|+|||+|++.|++++.. +++..+|+|.|.++++++++|||+|+++++|+|.+++|+++++++|+++++|||++
T Consensus 87 ~l~~HGf~r~~~W~~~~~~-----~~~~~~v~l~l~~~~~~~~~~P~~~~~~~~y~L~~~~L~i~~~~~N~~~~~~~~~~ 161 (289)
T 3k25_A 87 RLKQHGFARDLPWEVIGQQ-----TQDNARLDLRLSHNDATLEAFPFAFELVFSYQLQGHSLRIEQRIANLGDQRMPFSL 161 (289)
T ss_dssp ECCTTBSGGGSCCEEEEEE-----CSSSEEEEEEEECCHHHHTTSCSCEEEEEEEEEETTEEEEEEEEEECSSSCEEECC
T ss_pred ecCCCCCcccCCeEEEEec-----CCCCcEEEEEEecChhHHhcCCceEEEEEEEEEeCCEEEEEEEEEcCCCCcceeEE
Confidence 6899999999999998763 23466899999998888999999999999999999999999999999999999999
Q ss_pred cCcceeecCCCCeeEEEcCCCCccccccCccccccccCceEEe-ccCcceEEcCC-CCeEEEEeCCCCcEEEEEecC-CC
Q 023497 131 ALRNYLSVSDISEVRVEGLETLDYFDYLMNKERFTEQADAITF-DGEIDRVYLST-PTKIAIIDHEKKRTFELRKDG-MP 207 (281)
Q Consensus 131 g~HpYF~v~~~~~~~v~gl~~~~~~d~l~~~~~~~~~~~~l~~-~~~~D~vy~~~-~~~~~l~~~~~~~~i~i~~~~-~~ 207 (281)
|+||||+++++.+++|.++. ..|+|+..... .. ..+.+.+ .+++|++|... .+.++|.++..+++|+|+.++ ++
T Consensus 162 ~~H~yF~~~~~~~~~~~~~~-~~~~d~~~~~~-~~-~~~~~~~~~~~~D~~~~~~~~~~~~l~~~~~~~~i~v~~~~~~~ 238 (289)
T 3k25_A 162 GFHPYFFCREKLGITLAIPA-NDYLDQKTGDC-HG-YDGQLNLTSPELDLAFTQISQPRAHFIDPDRNLKIEVSFSELYQ 238 (289)
T ss_dssp EECCEEECSCCTTCEEECSC-SEEEETTTCCE-EE-CCSCCCTTSSEEEEEECCCSSSEEEEEETTTTEEEEEEECTTCC
T ss_pred ecCcEEccCCcceEEEEcCc-ccccccccCcc-cc-cCCcccCCchhhceEeecCCCCeEEEEECCCCCEEEEEeCCCCc
Confidence 99999999999999999874 46777543221 11 1223444 35789999875 357899999999999999886 89
Q ss_pred cEEEeCCcccccccCCCCCCCCCcceEEeccccc--------CCCeEeCCCCEEEEEEEEEEEe
Q 023497 208 DSVVWNPWDKKAKALPDMGVDGYKTMLCVDSAAI--------ENPIVLKPFEEWRGRQELSTVS 263 (281)
Q Consensus 208 ~~vvwnP~~~~~~~~~d~~~~~~~~~vCvEp~~~--------~~~~~L~pge~~~~~~~i~~~~ 263 (281)
++|||||. +++|||||||+. .+.+.|+|||+++++++|+++.
T Consensus 239 ~~vvw~~~--------------~~~fvCvEP~~~~~da~n~~~~~~~L~PGe~~~~~~~i~v~~ 288 (289)
T 3k25_A 239 TLVLWTVA--------------GKDYLCLEPWSGPRNALNSGEQLAWVEPYSSRSAWVNFQVST 288 (289)
T ss_dssp EEEEEEES--------------SSCEEEEEEESSCTTHHHHCTTCEEECTTEEEEEEEEEEEEC
T ss_pred EEEEEecC--------------CCCEEEEccccCCCCcccCCCCcEEECCCCeEEEEEEEEEEe
Confidence 99999984 468999999984 5799999999999999999863
No 5
>3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus}
Probab=100.00 E-value=6.5e-38 Score=283.39 Aligned_cols=232 Identities=19% Similarity=0.269 Sum_probs=172.1
Q ss_pred CCCcEEEEECCCcceEEEEecCCCC-CcCCcceEccccCCC-----------CCCccceeeeccCeEEeecCCCCCCCCC
Q 023497 10 DGLPRIILTEPTGSSAESFWKPPKA-IRGGIPVCFPQFGNL-----------GLLEQHGFARNRFWSLDEDASPLPPANN 77 (281)
Q Consensus 10 ~~l~~~~l~~~~g~~~~v~~~~~~~-irgGiPv~fP~~G~~-----------~~~p~HGfaR~~~W~v~~~~~~~~~~~~ 77 (281)
-|..++.+....|. .+|+|..+.+ +.+|+|+||||+||+ |.+|+|||+|++.|++++..
T Consensus 17 ~GA~l~s~~~~~~~-~e~l~~~~~~~~~~~~pil~P~~nRi~~g~~~~~G~~y~l~~HGf~r~~~w~v~~~~-------- 87 (307)
T 3dcd_A 17 HGAEIQSVKSAHTD-EEFMWQANPEIWGRHAPVLFPIVGRLKNDEYTYKGKTYHLGQHGFARNADFEVENHT-------- 87 (307)
T ss_dssp BTTEEEEEEETTTC-CBCBCCCCTTTCCCSSCEEBSCSSCCGGGEEEETTEEEECCTTBSGGGSBCEEEEEE--------
T ss_pred cCcEEEEEEECCCC-cEEEECCChhhcCCCCcEEEeecCccCCCeEEECCEEEecCCCCCccCcEEEEEEec--------
Confidence 45555555543322 3667777655 567999999999997 36899999999999998763
Q ss_pred ccEEEEEecCChhhhccCCcceEEEEEEEEeCCeeEEEEEEEeCCCCceeeeecCcceeecCC-----CCeeEEEcCCCC
Q 023497 78 QSTVDLILKSTEEDIKAWPRGFELRLRISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVSD-----ISEVRVEGLETL 152 (281)
Q Consensus 78 ~~~v~l~l~~~~~~~~~~P~~f~l~~~~~L~~~~L~~~l~v~N~g~~~~~f~~g~HpYF~v~~-----~~~~~v~gl~~~ 152 (281)
+++|+|++.++++++++|||+|+++++|+|.+++|+++++++|+|+++|||++|+||||+++. +.+.++. ++..
T Consensus 88 ~~~v~l~l~~~~~~~~~yP~~~~~~v~y~L~~~~L~i~~~v~N~g~~~~p~~~g~HpyF~~~~~~~~~~~d~~L~-~~a~ 166 (307)
T 3dcd_A 88 KESITFLLKDNEETRKVYPFKFEFRVNYNLMNNLLEENFSVVNKSDETMIFGVGGHPGFNLPTDHGENKEDFYFD-MHPS 166 (307)
T ss_dssp TTEEEEEEECCHHHHHHSCCCEEEEEEEEEETTEEEEEEEEEECSSSCEEECEEECCEEECCCTTSCCGGGEEEE-EESC
T ss_pred CCEEEEEEecCcchhhhCCCceEEEEEEEEeCCEEEEEEEEECCCCCcEeEEEEcCcEEEcCCCCCCccccEEEE-EcCC
Confidence 567999999988889999999999999999999999999999999999999999999999983 2334332 1111
Q ss_pred cccc--ccCcc-------ccccccCceEEecc-Ccc--e-EEcCCC--CeEEEEeCCCCcEEEEEecCCCcEEEeCCccc
Q 023497 153 DYFD--YLMNK-------ERFTEQADAITFDG-EID--R-VYLSTP--TKIAIIDHEKKRTFELRKDGMPDSVVWNPWDK 217 (281)
Q Consensus 153 ~~~d--~l~~~-------~~~~~~~~~l~~~~-~~D--~-vy~~~~--~~~~l~~~~~~~~i~i~~~~~~~~vvwnP~~~ 217 (281)
.+++ .++.+ ..+. ....+.++. ..| . +|...+ ..++|.++++++.|+|..+++|+++||+|...
T Consensus 167 ~~~~~~~l~~g~~~~~~~~~~~-~~~~~~l~~~~fd~da~~~~~~~~~~~v~l~~~~~g~~v~v~~~~fp~l~iwt~~~~ 245 (307)
T 3dcd_A 167 VTRVRIPLKDASLDWNNRSLAP-TDSLIALSDDLFKDDALIYELRGNDNKVSLRTDKNKFHVNVWTRDAPFVGIWSQYPK 245 (307)
T ss_dssp CCEEECCEETTEECGGGCEEEC-TTSCEECCSGGGTTSCEEEECCSSCEEEEEEETTSSCEEEEEEETCSEEEEECCSSS
T ss_pred CceeeeecCCcccccccccccc-cCCcccCCHHHcCCceEEEcCCCCceEEEEEeCCCCcEEEEEECCCCEEEEECcCCC
Confidence 1111 11111 0010 122344543 244 2 344332 46889999899999999888999999998311
Q ss_pred ccccCCCCCCCCCcceEEeccccc--------------CCCeEeCCCCEEEEEEEEEEEec
Q 023497 218 KAKALPDMGVDGYKTMLCVDSAAI--------------ENPIVLKPFEEWRGRQELSTVSS 264 (281)
Q Consensus 218 ~~~~~~d~~~~~~~~~vCvEp~~~--------------~~~~~L~pge~~~~~~~i~~~~~ 264 (281)
..+|||||||+. .+.+.|+|||+++.+++|++...
T Consensus 246 ------------~~~fvciEP~tg~~Da~n~~~~~~~k~gl~~L~PGe~~~~~~~i~~~~~ 294 (307)
T 3dcd_A 246 ------------TDNYVCIEPWWGIADRDDADGDLEHKYGMNHLKPGKEFQAGFSMTYHST 294 (307)
T ss_dssp ------------CCSEEEEEEEESCCCBTTCCSBGGGCTTCEEECTTCEEEEEEEEEEECS
T ss_pred ------------CCCEEEEccccCCCCCCCCCCchhccCCCEEECCCCEEEEEEEEEEEEC
Confidence 257999999973 27899999999999999999764
No 6
>3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei}
Probab=100.00 E-value=2e-37 Score=278.63 Aligned_cols=231 Identities=19% Similarity=0.310 Sum_probs=175.5
Q ss_pred CCCCcEEEEECC-CcceEEEEecCCCC-CcCCcceEccccCCC-----------CCCccceeeeccCeEEeecCCCCCCC
Q 023497 9 KDGLPRIILTEP-TGSSAESFWKPPKA-IRGGIPVCFPQFGNL-----------GLLEQHGFARNRFWSLDEDASPLPPA 75 (281)
Q Consensus 9 ~~~l~~~~l~~~-~g~~~~v~~~~~~~-irgGiPv~fP~~G~~-----------~~~p~HGfaR~~~W~v~~~~~~~~~~ 75 (281)
.-|..++.+..+ +| .+|+|..+.. +.++.|+||||+||+ |.+|+|||+|++.|++++.
T Consensus 16 ~~Ga~l~s~~~~~~g--~e~l~~~~~~~~~~~~p~l~P~~~Ri~~g~~~~~G~~y~l~~HGf~r~~~w~~~~~------- 86 (294)
T 3q1n_A 16 ERGAELQSLVNKADN--YEYVWTGDKTFWNRHAPILFPSIGKSNQDQYRLGAKTYPMSQHGFARDYDFDVSDK------- 86 (294)
T ss_dssp TBTTEEEEEEETTTT--EECBCCCCTTTCSCSCCEEBSCCSCCGGGEEEETTEEEECCTTBSGGGSBCEEESC-------
T ss_pred ccCcEEEEEEeCCCC--CEEEEcCChhhccCCCCEEEeccCCcCCCEEEECCcEEccCCCCCccCcceEEEEc-------
Confidence 356677777765 35 4788887654 677999999999997 4789999999999999875
Q ss_pred CCccEEEEEecCChhhhccCCcceEEEEEEEEeCCeeEEEEEEEeCCCCceeeeecCcceeecCC-----CCee--EEEc
Q 023497 76 NNQSTVDLILKSTEEDIKAWPRGFELRLRISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVSD-----ISEV--RVEG 148 (281)
Q Consensus 76 ~~~~~v~l~l~~~~~~~~~~P~~f~l~~~~~L~~~~L~~~l~v~N~g~~~~~f~~g~HpYF~v~~-----~~~~--~v~g 148 (281)
++++|+|++.++++++++|||+|+++++|+|.+++|+++++++|+++++|||++|+||||+++. +.+. ++..
T Consensus 87 -~~~~v~l~l~~~~~~~~~yP~~~~~~v~y~L~~~~L~i~~~~~N~~~~~~p~~~~~H~yFnl~~~~~~~~~d~~l~~~a 165 (294)
T 3q1n_A 87 -SDSAVTFTQHQNAETLKKFPFEYTLAVTYMLTDGGLSVHYTVTNDDSKSMPFALGFHPAFNVGLKADGSFDDYDLTVEP 165 (294)
T ss_dssp -CSSEEEEEEECCHHHHHHSCCCEEEEEEEEEETTEEEEEEEEEECSSSCEEECEEECCEEECCBCTTSSBCSCEEEEEC
T ss_pred -cCCEEEEEEEcCcchhhcCCeEEEEEEEEEEeCCEEEEEEEEEcCCCCceeeeEecCcEEEcCCCCCCcccCEEEEEcC
Confidence 3568999999988888999999999999999999999999999999999999999999999983 2333 4432
Q ss_pred CC-CCccc--c--ccCccccc--cc-cCceEEecc-Ccce--E-EcCC-CCeEEEEeCCCCcEEEEEecCCCcEEEeCCc
Q 023497 149 LE-TLDYF--D--YLMNKERF--TE-QADAITFDG-EIDR--V-YLST-PTKIAIIDHEKKRTFELRKDGMPDSVVWNPW 215 (281)
Q Consensus 149 l~-~~~~~--d--~l~~~~~~--~~-~~~~l~~~~-~~D~--v-y~~~-~~~~~l~~~~~~~~i~i~~~~~~~~vvwnP~ 215 (281)
-. ...++ | .++....+ .. ....+.++. ..|+ . +... ...++|.++++++.|+|..+++|+++||+|.
T Consensus 166 ~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~l~~~~fd~d~~~~~~~~~~~~~l~~~~~g~~l~v~~~~~p~l~iwt~~ 245 (294)
T 3q1n_A 166 LNSPLQRFGIGPVPFRNGDVEDIPGAEGNRLPLTHDLLDGGLVILANSEIAKATLASPHHDHSITLDISDFPYLTIWSPE 245 (294)
T ss_dssp CSSCCEEEEESSTTSEEEEEEECTTCBTTEEECCHHHHTTCCEEECCTTCCEEEEECTTCSCCEEEECTTCSEEEEECCT
T ss_pred CcccceEEeeCCCCcCCCcccccccCCCceecCCHHHhcCCeEEEcCCCccEEEEEeCCCCcEEEEEECCCCEEEEECcC
Confidence 22 11232 2 23222211 11 123345543 3442 2 3222 3478899998999999999889999999985
Q ss_pred ccccccCCCCCCCCCcceEEeccccc--------------CCCeEeCCCCEEEEEEEEEE
Q 023497 216 DKKAKALPDMGVDGYKTMLCVDSAAI--------------ENPIVLKPFEEWRGRQELST 261 (281)
Q Consensus 216 ~~~~~~~~d~~~~~~~~~vCvEp~~~--------------~~~~~L~pge~~~~~~~i~~ 261 (281)
.. ..+|||||||+. .+.++|+|||+++.+++|++
T Consensus 246 ~~------------~~~~vciEP~tg~~Da~n~~~~~~~k~g~~~L~pGe~~~~~~~I~i 293 (294)
T 3q1n_A 246 HK------------KAPFIAVEPFDGLPDQAGEPTDWYTKLGNTTLSAGANKQLALKVEL 293 (294)
T ss_dssp TS------------CCSEEEEEEEESCCCBSSSCCBTTTCTTCEEECTTCEEEEEEEEEE
T ss_pred CC------------CCCEEEEeCcCCCCCCCCCCCchhccCCCEEECCCCEEEEEEEEEE
Confidence 21 257999999963 36899999999999999987
No 7
>3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis}
Probab=100.00 E-value=6.2e-37 Score=279.28 Aligned_cols=212 Identities=17% Similarity=0.227 Sum_probs=162.0
Q ss_pred CCCcCCcceEccccCCC-----------CCCc---------cceeeeccCeEEeecCCCCCCCCCccEEE--EEecCChh
Q 023497 33 KAIRGGIPVCFPQFGNL-----------GLLE---------QHGFARNRFWSLDEDASPLPPANNQSTVD--LILKSTEE 90 (281)
Q Consensus 33 ~~irgGiPv~fP~~G~~-----------~~~p---------~HGfaR~~~W~v~~~~~~~~~~~~~~~v~--l~l~~~~~ 90 (281)
+++++|+||||| +||+ |+++ +|||+|++.|++++... +++..+|+ |.+.+.++
T Consensus 61 ~~~~~G~pv~~p-~nRi~~g~~~~~G~~y~l~~N~~~~~~~lHG~~~~~~W~v~~~~~----~~~~~~v~~~~~~~~~~~ 135 (326)
T 3mwx_A 61 TPTLYGIPILFP-PNRISDGTFSFRGRTYHFDINEKDKHNHLHGFLYHEKWNVVTTKQ----TDEGVIVETEIDLSELPH 135 (326)
T ss_dssp CTTSSSCCEEBS-CSEEETTEEEETTEEEECCCCBTTTTEEESBSCTTSCCEEEEEEE----ESSCEEEEEEEEGGGCHH
T ss_pred CccccCceEcCC-CCcccCCEEEECCEEEEccCCCCCCCccccCCccCCceEEEEeec----cCCceEEEEEEEeCCCCc
Confidence 678999999999 6875 3455 49999999999987631 11233454 55566677
Q ss_pred hhccCCcceEEEEEEEEeCCeeEEEEEEEeCCCCceeeeecCcceeecCCCCeeEEEcCCCCccc--c--ccCcccc---
Q 023497 91 DIKAWPRGFELRLRISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVSDISEVRVEGLETLDYF--D--YLMNKER--- 163 (281)
Q Consensus 91 ~~~~~P~~f~l~~~~~L~~~~L~~~l~v~N~g~~~~~f~~g~HpYF~v~~~~~~~v~gl~~~~~~--d--~l~~~~~--- 163 (281)
++++|||+|+++++|+|.+++|+++++++|+++++|||++|+||||+++ +.+.++... ...|+ | .++.+..
T Consensus 136 ~~~g~P~~~~~~v~y~L~~~~L~i~~~~~N~~~~~~~~~~~~H~yFnl~-~~~~~l~~~-a~~~~~~d~~~iptg~~~~~ 213 (326)
T 3mwx_A 136 VQKQFPHHAVVRMTYTIKENTLFKHATVMNKGKEAFPWGIGYHTTFIFP-AESSLFSLT-ADQQWELDERLLPTGKLMDV 213 (326)
T ss_dssp HHHHSCSCEEEEEEEEEETTEEEEEEEEEECSSSCEEECCEECCCEECC-TTTEEEEES-EEEEEEECTTSCEEEEEEEC
T ss_pred cccCCCceEEEEEEEEEcCCcEEEEEEEEECCCCceeeEEeeccccCCC-CCCEEEEEE-CCcEEEeCCccCCCCccccC
Confidence 8889999999999999999999999999999999999999999999998 666655432 22233 2 1222211
Q ss_pred ---ccccCceEEeccCcceEEcCC------CCeEEEEeCCCCcEEEEEe-cCCCcEEEeCCcccccccCCCCCCCCCcce
Q 023497 164 ---FTEQADAITFDGEIDRVYLST------PTKIAIIDHEKKRTFELRK-DGMPDSVVWNPWDKKAKALPDMGVDGYKTM 233 (281)
Q Consensus 164 ---~~~~~~~l~~~~~~D~vy~~~------~~~~~l~~~~~~~~i~i~~-~~~~~~vvwnP~~~~~~~~~d~~~~~~~~~ 233 (281)
+......+.+..++|++|... ...++|.++.++++|+|.. .++|++|||+|+. ++.|
T Consensus 214 ~~~~~~~~~~~~~~~~~D~~f~~~~~~~~~~~~~~l~~~~~g~~l~~~~~~~~p~~~vwt~~~-------------~~~~ 280 (326)
T 3mwx_A 214 PYKEALHEGMDLRHKQLDDVFLSSYQKRGGENQAVIYHQHAHISIIYKADEQFKHWVVYNADG-------------KQGY 280 (326)
T ss_dssp TTHHHHHHCBCCTTCCCEEEEEESHHHHCSCCEEEEEETTTTEEEEEEECTTCCEEEEECTTS-------------CSSE
T ss_pred cchhhcccCcccCCccccceeeeccccCCCceEEEEEeCCCCEEEEEEeCCCCCEEEEECCCC-------------CCCE
Confidence 100112234556889999764 2478999999999999986 6899999999963 3579
Q ss_pred EEeccccc-------------CCCeEeCCCCEEEEEEEEEEEec
Q 023497 234 LCVDSAAI-------------ENPIVLKPFEEWRGRQELSTVSS 264 (281)
Q Consensus 234 vCvEp~~~-------------~~~~~L~pge~~~~~~~i~~~~~ 264 (281)
||||||+. .+.++|+|||+++.+++|+++..
T Consensus 281 vclEP~~~~~da~n~~~~~~~~g~~~L~PGe~~~~~~~i~~~~~ 324 (326)
T 3mwx_A 281 LCPEPYTWVTNAVNLDLPSSLTGLQVLEPGEETTAKSSITIELN 324 (326)
T ss_dssp EEEEEESSCTTGGGCCSCHHHHCCEEECTTCEEEEEEEEEEEEC
T ss_pred EEECCccCCCCccccCCCccccCCeEECCCCeEEEEEEEEEEec
Confidence 99999973 36799999999999999999864
No 8
>3os7_A Galactose mutarotase-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: PG4 TLA; 1.80A {Clostridium acetobutylicum}
Probab=100.00 E-value=1e-36 Score=279.46 Aligned_cols=212 Identities=20% Similarity=0.316 Sum_probs=161.5
Q ss_pred CCCcCCcceEccccCCC-----------CCCc---------cceeeeccCeEEeecCCCCCCCCCccEE--EEEecCChh
Q 023497 33 KAIRGGIPVCFPQFGNL-----------GLLE---------QHGFARNRFWSLDEDASPLPPANNQSTV--DLILKSTEE 90 (281)
Q Consensus 33 ~~irgGiPv~fP~~G~~-----------~~~p---------~HGfaR~~~W~v~~~~~~~~~~~~~~~v--~l~l~~~~~ 90 (281)
+++++|+||||| +||+ |.++ +|||+|++.|++++... +++..+| +|.+.+.++
T Consensus 68 ~~~~~G~pv~~p-~nRi~~g~f~~~G~~y~l~~N~~~~~~~lHG~~~~~~W~v~~~~~----~~~~~~v~~~~~~~d~~~ 142 (341)
T 3os7_A 68 RPQVYGLPVLFP-PNRIDDGTFKLGDKTYKFPINEAKNNNYIHGFIKNSKWTVHKKKI----DQDKALVEVVFDFTKENE 142 (341)
T ss_dssp SGGGSSCCEESS-CSEEETTEEEETTEEEECCCSBTTTTEEESCSGGGSCCEEEEEEE----ETTEEEEEEEEEECTTST
T ss_pred CCcccceeEeCC-CCcccCCEEEECCEEEEccCCCCCCCcCccCCcccCcEEEEEeec----CCCccEEEEEEEeCCCcc
Confidence 468999999999 5774 3444 69999999999987631 1123344 556667777
Q ss_pred hhccCCcceEEEEEEEEeCCeeEEEEEEEeCCCCceeeeecCcceeecC-----CCCeeEEEcCCCCccc--c--ccCcc
Q 023497 91 DIKAWPRGFELRLRISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVS-----DISEVRVEGLETLDYF--D--YLMNK 161 (281)
Q Consensus 91 ~~~~~P~~f~l~~~~~L~~~~L~~~l~v~N~g~~~~~f~~g~HpYF~v~-----~~~~~~v~gl~~~~~~--d--~l~~~ 161 (281)
++++|||+|+++++|+|.+++|+++++++|+++++|||++|+||||+++ ++.+.++.. ....|+ | .++.+
T Consensus 143 ~~~g~P~~~~~~v~y~L~~~~L~i~~~~~N~~~~~~p~~~~~H~yF~l~~~~~~~~~~~~l~~-~a~~~~~~d~~~iPtG 221 (341)
T 3os7_A 143 AYKYFSHEFQFKLSYELSSKGLKQTTSVVNLSSEEMPLSVGYHSAFNVPFIEGSEDSNCRVKI-SIDKFWKQDSRNLPTG 221 (341)
T ss_dssp TTTTSCCCEEEEEEEEEETTEEEEEEEEEECSSSCEEECCEECCEEESSCBTTCCGGGEEEEE-CEEEEEEECTTSCEEE
T ss_pred hhhcCCceEEEEEEEEEeCCeEEEEEEEEeCCCCcEEEEEecCceeecCCCCCCCcccEEEEE-eCCcEEecCcccCCCC
Confidence 8889999999999999999999999999999999999999999999998 355666652 233343 2 22221
Q ss_pred -------ccccc-cCceEEeccCcceEEcCC----C----CeEEEEeCCCCcEEEEEe-cCCCcEEEeCCcccccccCCC
Q 023497 162 -------ERFTE-QADAITFDGEIDRVYLST----P----TKIAIIDHEKKRTFELRK-DGMPDSVVWNPWDKKAKALPD 224 (281)
Q Consensus 162 -------~~~~~-~~~~l~~~~~~D~vy~~~----~----~~~~l~~~~~~~~i~i~~-~~~~~~vvwnP~~~~~~~~~d 224 (281)
..+.. ....+....++|++|... . ..++|.++.++++|+|.+ .++|++|||+|+.
T Consensus 222 ~~~~v~~~~~df~~~~~~~~~~~~D~~f~~~~~~~~g~~~~~~~l~~~~~g~~l~v~~~~~~p~~~vwt~~~-------- 293 (341)
T 3os7_A 222 ESFAPTGEQKEYLENGVAVASHPIESLFSLKDIDVNGKTFRGACIEDASKNTRVVYEMSSEYKYLVIWNDMG-------- 293 (341)
T ss_dssp EEECCCGGGGGGGTTCBCTTSSCCEEEEEECCEEETTEEECEEEEEEGGGTEEEEEEECTTCCEEEEECGGG--------
T ss_pred ccccCCCccchhhcCCcccCCcchhhhccccccccCCCcceEEEEEeCCCCeEEEEEeCCCCCEEEEEcCCC--------
Confidence 11111 112334456899999754 2 358899998999999998 5899999999963
Q ss_pred CCCCCCcceEEeccccc-------------CCCeEeCCCCEEEEEEEEEEEe
Q 023497 225 MGVDGYKTMLCVDSAAI-------------ENPIVLKPFEEWRGRQELSTVS 263 (281)
Q Consensus 225 ~~~~~~~~~vCvEp~~~-------------~~~~~L~pge~~~~~~~i~~~~ 263 (281)
++.|||||||+. .+.++|+|||+++.+++|+++.
T Consensus 294 -----~~~~vclEP~~~~pDa~n~~~~~~~~g~~~L~PGe~~~~~~~i~v~~ 340 (341)
T 3os7_A 294 -----DKKYACIEPQTSIINSPNVKLDRSVSGFKTLKPNESWSGVCKLYIEN 340 (341)
T ss_dssp -----CSSEEEEEEESSCTTGGGCSSCHHHHCCEEECTTCEEEEEEEEEEEE
T ss_pred -----CCCEEEECCccCCCCccCCCCcccccCceEECCCCEEEEEEEEEEEe
Confidence 357999999863 2689999999999999999976
No 9
>3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli}
Probab=100.00 E-value=6.7e-36 Score=268.34 Aligned_cols=206 Identities=13% Similarity=0.159 Sum_probs=161.7
Q ss_pred CCCcCCcceEccccCCCC--------------------CCccceeeeccCeEEeecCCCCCCCCCccEEEEEecCChhhh
Q 023497 33 KAIRGGIPVCFPQFGNLG--------------------LLEQHGFARNRFWSLDEDASPLPPANNQSTVDLILKSTEEDI 92 (281)
Q Consensus 33 ~~irgGiPv~fP~~G~~~--------------------~~p~HGfaR~~~W~v~~~~~~~~~~~~~~~v~l~l~~~~~~~ 92 (281)
+++|+|.|+||||+||+. ..++|||+|++.|++++.. +++|+|+|.+.
T Consensus 42 ~~~~~~g~~l~p~~nRi~~g~~~~~G~~y~l~~N~~~~~~~~HG~~~~~~W~~~~~~--------~~~v~l~l~~~---- 109 (291)
T 3nre_A 42 VATDASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHS--------DDSLCLVYEHR---- 109 (291)
T ss_dssp CGGGSSEEEEBSCCSBCGGGEEEETTEEEECCCCSTTCSSCBSBSGGGSBCEEEEEC--------SSEEEEEEEEE----
T ss_pred CccccCCcEEEeeCCEecCCEEEECCEEEECCCCCCCCCCCCCCchhcceeEEEEcc--------CCEEEEEEeCC----
Confidence 578899999999999971 3578999999999998763 45788988752
Q ss_pred ccCCcceEEEEEEEEeCCeeEEEEEEEeCCCCceeeeecCcceeecCCCCeeEEEcCCCCcccc----ccCccccccccC
Q 023497 93 KAWPRGFELRLRISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVSDISEVRVEGLETLDYFD----YLMNKERFTEQA 168 (281)
Q Consensus 93 ~~~P~~f~l~~~~~L~~~~L~~~l~v~N~g~~~~~f~~g~HpYF~v~~~~~~~v~gl~~~~~~d----~l~~~~~~~~~~ 168 (281)
+ |||+|+++++|+|.+++|+++++++|+++++|||++|+||||++++...+++. ...|++ .++.+... ...
T Consensus 110 ~-~P~~~~~~v~y~L~~~~L~i~~~~~N~~~~~~~~~~~~H~YFnl~~~~~l~i~---a~~~~~~d~~~iPtg~~~-v~~ 184 (291)
T 3nre_A 110 S-GVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTGWHPYFPLSPQTRIQAQ---ASGYWLEREQWLAGEFCE-QLP 184 (291)
T ss_dssp S-SSCEEEEEEEEEECSSEEEEEEEEEECSSSCEEECCEEEEEEECCTTCEEEEC---CSEEEEECGGGCEEEEES-SCC
T ss_pred C-CCceEEEEEEEEEeCCeEEEEEEEEECCCCCccceEEcCccEecCCCeEEEEE---CCEEEEcCCCcCCCcccc-CCC
Confidence 6 99999999999999999999999999999999999999999999986666664 334542 23333221 112
Q ss_pred ceEEec-------cCcceEEcCCCCeEEEEeCCCCcEEEEEecCC-CcEEEeCCcccccccCCCCCCCCCc-ceEEeccc
Q 023497 169 DAITFD-------GEIDRVYLSTPTKIAIIDHEKKRTFELRKDGM-PDSVVWNPWDKKAKALPDMGVDGYK-TMLCVDSA 239 (281)
Q Consensus 169 ~~l~~~-------~~~D~vy~~~~~~~~l~~~~~~~~i~i~~~~~-~~~vvwnP~~~~~~~~~d~~~~~~~-~~vCvEp~ 239 (281)
..+.|. ..+|++|......++|.++.++++|+|.++.. +.+|||||+.++ +..|+ .||||||+
T Consensus 185 t~~df~~~~~l~~~~~D~~f~~~~~~a~l~~~~~g~~l~v~t~~p~~~~~vyt~~~~~--------~~~~~~~~vclEp~ 256 (291)
T 3nre_A 185 QELDFNQPAPLPRQWVNNGFAGWNGQARIEQPQEGYAIIMETTPPAPCYFIFVSDPAF--------DKGYAFDFFCLEPM 256 (291)
T ss_dssp GGGCCSSCEECCSSCEEEEEESCCSEEEEEEGGGTEEEEEEEESCCSEEEEEECCTTT--------CTTCCSCEEEEEEE
T ss_pred CcccccCCcCCCCccccceeecCCccEEEEECCCCeEEEEEeCCCCceEEEEcCCCCC--------CCCccCCEEEEcCc
Confidence 233332 36999998877789999999999999987743 258999997311 22355 89999999
Q ss_pred cc----------CCCeEeCCCCEEEEEEEEEEEe
Q 023497 240 AI----------ENPIVLKPFEEWRGRQELSTVS 263 (281)
Q Consensus 240 ~~----------~~~~~L~pge~~~~~~~i~~~~ 263 (281)
+. .+.++|+|||+++.+++|+++.
T Consensus 257 ~~~pda~n~~~~~~~~~L~PGe~~~~~~~~~~~~ 290 (291)
T 3nre_A 257 SHAPDDHHRPEGGDLIALAPGESTTSEMSLRVEW 290 (291)
T ss_dssp SSCTTGGGSGGGTTCEEECTTCEEEEEEEEEEEE
T ss_pred cCCCCCCcCCCCCCCEEECCCCEEEEEEEEEEEe
Confidence 63 1579999999999999999865
No 10
>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-34 Score=265.40 Aligned_cols=217 Identities=12% Similarity=0.172 Sum_probs=158.4
Q ss_pred cCCCCCcCCcceEccccCCC-----------CCCc-------cceee---eccCeEEeecCCCCCCCCCccEEEEEecCC
Q 023497 30 KPPKAIRGGIPVCFPQFGNL-----------GLLE-------QHGFA---RNRFWSLDEDASPLPPANNQSTVDLILKST 88 (281)
Q Consensus 30 ~~~~~irgGiPv~fP~~G~~-----------~~~p-------~HGfa---R~~~W~v~~~~~~~~~~~~~~~v~l~l~~~ 88 (281)
+++++++|+ +++||+||+ |.++ +|||+ |++.|+++.... .+.++.+|+|.|.+.
T Consensus 53 ~~~~~~~G~--~l~p~~nRi~~g~f~~~G~~y~l~~n~~~~~lHG~~~g~~~~~W~v~~~~~---~~~~~~~v~l~l~~~ 127 (342)
T 1yga_A 53 LTDGNMMGA--TVGRYANRIAKGVFSLDDGPHKLTVNNCGNTNHSSISSLNLKQYKASPVEN---PSKGVYVVEFKLLDD 127 (342)
T ss_dssp TTCSSCTTC--EECSBCSEEGGGEEEETTEEEECCCCBTTBEETTGGGCGGGSBCEECCCEE---EETTEEEEEEEEEEC
T ss_pred ccCCCeEcc--EECCCCCceeCCEEEECCEEEEcCCCCCCcccCCCccccCcceeeeEEeec---cCCCCCEEEEEEECC
Confidence 455667765 556999986 2454 59999 699999975410 000355688888764
Q ss_pred --hhhhccCCcceEEEEEEEEeC--CeeEEEEEEEeCCCCceeeeecCcceeecC------CCCeeEEEcCCCCcccc--
Q 023497 89 --EEDIKAWPRGFELRLRISISP--GKLTLIPRVRNVDNKAFSFMFALRNYLSVS------DISEVRVEGLETLDYFD-- 156 (281)
Q Consensus 89 --~~~~~~~P~~f~l~~~~~L~~--~~L~~~l~v~N~g~~~~~f~~g~HpYF~v~------~~~~~~v~gl~~~~~~d-- 156 (281)
+++++.|||+|+++++|+|.+ ++|+++|+++|+++++|||++|+||||+++ ++.+.+|. +....|++
T Consensus 128 ~~~~g~~~yP~~~~~~vty~L~~~~~~L~i~~~~~N~~d~~~p~~~~~H~YFnl~~~~~~~~i~~~~l~-l~a~~~~~~d 206 (342)
T 1yga_A 128 HTQPNPNEFPGDLEVTVKYTLNVAEMTLDMEYQAQLVRGDATPINMTNHSYFNLNKVKSEKSIRGTEVK-VCSNKSLEVT 206 (342)
T ss_dssp SSSSSCCCSSSEEEEEEEEEEETTTTEEEEEEEEEEEESSEEECBCEECCCBCTTTTTCTTCCTTEEEE-ESCCEEEEEC
T ss_pred cccCCCcCCCeEEEEEEEEEEeCCCCEEEEEEEEEeCCCCceEEeeeccceEEcCCCCCCCcccceEEE-EeCCeEEEEC
Confidence 445566999999999999984 899999999999999999999999999998 35566776 55556663
Q ss_pred c---cCccccccccC------ceEEecc---CcceEEcCCC----------------CeEEEEeCCCCcEEEEEecCCCc
Q 023497 157 Y---LMNKERFTEQA------DAITFDG---EIDRVYLSTP----------------TKIAIIDHEKKRTFELRKDGMPD 208 (281)
Q Consensus 157 ~---l~~~~~~~~~~------~~l~~~~---~~D~vy~~~~----------------~~~~l~~~~~~~~i~i~~~~~~~ 208 (281)
. ++.++...... ....+.. .+|++|.... ..++|.++.++++|+|.++ +|.
T Consensus 207 ~~~~iPtg~~~~v~~~~~df~~~~~l~~~~~~~D~~f~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~g~~l~v~~~-~p~ 285 (342)
T 1yga_A 207 EGALLPTGKIIERNIATFDSTKPTVLHEDTPVFDCTFIIDANKDLKTTDSVSVNKLVPVFKAYHPESHIKFEVSTT-EPT 285 (342)
T ss_dssp TTTCCEEEEEEECSCCBTTCSSCEEECSSCCCCEEEEECTTTTTCCSSBCTTTSCCEEEEEEECTTTCCEEEEEES-SSE
T ss_pred CCCCCcCCCeEecCCCcccccCCeecCcccCCCCcEEEeCCCccccccccccccccceEEEEEeCCCCeEEEEEeC-CCE
Confidence 2 33222111111 1233333 6999997542 3578889889999999998 999
Q ss_pred EEEeCCcccccccCCCCCCCCC--cceEEecccccC---------CCeEeCCCCEEEEEEEEEEE
Q 023497 209 SVVWNPWDKKAKALPDMGVDGY--KTMLCVDSAAIE---------NPIVLKPFEEWRGRQELSTV 262 (281)
Q Consensus 209 ~vvwnP~~~~~~~~~d~~~~~~--~~~vCvEp~~~~---------~~~~L~pge~~~~~~~i~~~ 262 (281)
+|||||+. | ++.| +.||||||+... +.++|+|||+++.+++|++.
T Consensus 286 ~~vyt~~~-----~----~~~y~~~~~vclEp~~~pda~n~~~~~~~~~L~pGe~~~~~~~~~f~ 341 (342)
T 1yga_A 286 VHLYTGDN-----L----CGKFVPRSGFAVQQGRYVDAINRDEWRGCVLLKRGEVYTSKTQYKFD 341 (342)
T ss_dssp EEEECCTT-----C----CTTSCTTSCBEEEEESCSSGGGCHHHHGGGEEETTCCEEEEEEEEEE
T ss_pred EEEECCCC-----c----cccCCCCCEEEEECCCCCCcccCCCCCCCeEECCCCEEEEEEEEEEE
Confidence 99999963 1 1233 689999998632 34899999999999999874
No 11
>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A*
Probab=100.00 E-value=1.6e-33 Score=258.45 Aligned_cols=216 Identities=16% Similarity=0.213 Sum_probs=155.9
Q ss_pred cCCCCCcCCcceEccccCCC-----------CCCc-------cceeee---ccCeEEeecCCCCCCCCCccEEEEEecCC
Q 023497 30 KPPKAIRGGIPVCFPQFGNL-----------GLLE-------QHGFAR---NRFWSLDEDASPLPPANNQSTVDLILKST 88 (281)
Q Consensus 30 ~~~~~irgGiPv~fP~~G~~-----------~~~p-------~HGfaR---~~~W~v~~~~~~~~~~~~~~~v~l~l~~~ 88 (281)
.++.+++| ++||||+||+ |.++ +|||+| ++.|++++. + ++|+|++.+.
T Consensus 68 ~~~~~~~G--~~l~p~~nRi~~g~f~~~G~~y~L~~N~~~~~lHG~~~g~~~~~W~v~~~--------~-~~v~l~l~~~ 136 (344)
T 1snz_A 68 LQKQPYFG--AVIGRVANRIAKGTFKVDGKEYHLAINKEPNSLHGGVRGFDKVLWTPRVL--------S-NGVQFSRISP 136 (344)
T ss_dssp HSSCSCTT--CEECSBCSEEGGGEEEETTEEEECCCTBTTBEETTSSSCGGGSBCEEEEE--------T-TEEEEEEEEC
T ss_pred hhCCCcee--eEecCcCCcccCCEEEECCEEEECCCCCCCcccCCCccccccceeeEEEe--------C-CEEEEEEECC
Confidence 34455665 3899999986 2444 899996 899999876 2 4688888775
Q ss_pred hhhhccCCcceEEEEEEEEeCCeeEEEEEEEeCCCCceeeeecCcceeecCC-----CCeeEEEcCCCCcccc----ccC
Q 023497 89 EEDIKAWPRGFELRLRISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVSD-----ISEVRVEGLETLDYFD----YLM 159 (281)
Q Consensus 89 ~~~~~~~P~~f~l~~~~~L~~~~L~~~l~v~N~g~~~~~f~~g~HpYF~v~~-----~~~~~v~gl~~~~~~d----~l~ 159 (281)
+ ..++|||+|+++++|+|.+++|+++++++| +++|||++|+||||+++. +.+.++. +....|++ .++
T Consensus 137 ~-~~~gyP~~~~~~vty~L~~~~L~i~~~a~~--d~~~p~~~~~H~YFnl~~~~~~~i~~~~L~-i~a~~~~~~d~~~iP 212 (344)
T 1snz_A 137 D-GEEGYPGELKVWVTYTLDGGELIVNYRAQA--SQATPVNLTNHSYFNLAGQASPNINDHEVT-IEADTYLPVDETLIP 212 (344)
T ss_dssp T-TGGGCCSCEEEEEEEEEETTEEEEEEEEEE--SSCEECBCEECCCBCTTCTTCSCCTTCEEE-ECEEEECCBCTTSCB
T ss_pred C-cCCCCCEEEEEEEEEEEcCCEEEEEEEEEe--CCceEEeccccceEecCCCCCCcccCEEEE-EECCeEEEeCCCCcc
Confidence 5 478999999999999999889999999998 899999999999999984 4455554 33334542 233
Q ss_pred ccccccccCceEEec--------------cCcceEEcCCC-----CeEEEEeCCCCcEEEEEecCCCcEEEeCCcccccc
Q 023497 160 NKERFTEQADAITFD--------------GEIDRVYLSTP-----TKIAIIDHEKKRTFELRKDGMPDSVVWNPWDKKAK 220 (281)
Q Consensus 160 ~~~~~~~~~~~l~~~--------------~~~D~vy~~~~-----~~~~l~~~~~~~~i~i~~~~~~~~vvwnP~~~~~~ 220 (281)
.++........+.|. +++|++|.... ..++|.++.++++|+|.++ +|.+|||+|+... .
T Consensus 213 tg~~~~v~~t~~df~~~~~l~~~~~~~~~~g~D~~f~~~~~~~~~~~a~l~~~~sg~~l~v~t~-~p~~~vyt~~~~~-~ 290 (344)
T 1snz_A 213 TGEVAPVQGTAFDLRKPVELGKHLQDFHLNGFDHNFCLKGSKEKHFCARVHHAASGRVLEVYTT-QPGVQFYTGNFLD-G 290 (344)
T ss_dssp CSCCEECTTSTTCCSSCEEHHHHHHHTTCCCCEEEEEECCCSSCEEEEEEEETTTTEEEEEEES-SSEEEEECCTTCE-E
T ss_pred cCceecCCCCcccccCCcCcChhhcccccCCCCeEEEccCCCCCceEEEEEeCCCCcEEEEEeC-CCeEEEECCCCCC-c
Confidence 222111111122222 14799996532 2578999999999999988 9999999984211 1
Q ss_pred cCCCCCCCCC--cceEEeccccc--------CCCeEeCCCCEEEEEEEEEEE
Q 023497 221 ALPDMGVDGY--KTMLCVDSAAI--------ENPIVLKPFEEWRGRQELSTV 262 (281)
Q Consensus 221 ~~~d~~~~~~--~~~vCvEp~~~--------~~~~~L~pge~~~~~~~i~~~ 262 (281)
.+.++.+..| +.|||||||.. .+.++|+|||+++.+++|++.
T Consensus 291 ~~~~~~~~~y~~~~~vclEp~~~pda~n~~~~~~~~L~pGe~~~~~~~~~f~ 342 (344)
T 1snz_A 291 TLKGKNGAVYPKHSGFCLETQNWPDAVNQPRFPPVLLRPGEEYDHTTWFKFS 342 (344)
T ss_dssp EEECGGGCEEETTSCBEEEEESCTTGGGCTTSCCCEECTTSCEEEEEEEEEE
T ss_pred cccCCCCcccCCCCEEEEeCcCCCCcccCCCCCCeEECCCCEEEEEEEEEEE
Confidence 1222222223 57999999964 257899999999999999985
No 12
>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4
Probab=99.96 E-value=2.1e-29 Score=230.68 Aligned_cols=232 Identities=13% Similarity=0.152 Sum_probs=162.5
Q ss_pred CCCcEEEEECC--CcceEEEEecCC--------CCCcCCcceEccccCCC-----------CCCc-------cceee---
Q 023497 10 DGLPRIILTEP--TGSSAESFWKPP--------KAIRGGIPVCFPQFGNL-----------GLLE-------QHGFA--- 58 (281)
Q Consensus 10 ~~l~~~~l~~~--~g~~~~v~~~~~--------~~irgGiPv~fP~~G~~-----------~~~p-------~HGfa--- 58 (281)
-|..++.|..+ +|...+|+|..+ .+.+ -++++||.||+ |.++ +|||+
T Consensus 30 ~GA~l~sl~~~d~~G~~~dvvl~~~~~~~y~~~~~~~--G~~lgp~anRI~~g~f~~~G~~y~L~~N~~~n~lHGg~~g~ 107 (339)
T 1lur_A 30 FGATLAKLTFPDKNGKNQDLVLGFDTIDEFEKDAASI--GKTVGRVANRIKNSTLHFDGKQYTMTPNNGPHYLHGGPNGL 107 (339)
T ss_dssp BTTEEEEEEEECTTSCEEECBCCCSSHHHHHHCSSCT--TCEECSBCSEEGGGEEEETTEEEECCCSBTTBEETTCTTSG
T ss_pred CCcEEEEEEEECCCCCEeEEEEcCCChHHhccCCCcc--ccEecCcCCeecCCEEEECCEEEECCCCCCCcccCCCCccc
Confidence 35555555553 354346655432 2223 35778999886 3455 99999
Q ss_pred eccCeEEeecCCCCCCCCCccEEEEEecCChhhhccCCcceEEEEEEEEe-CCeeEEEEEEEeCCCCceeeeecCcceee
Q 023497 59 RNRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFELRLRISIS-PGKLTLIPRVRNVDNKAFSFMFALRNYLS 137 (281)
Q Consensus 59 R~~~W~v~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~~~~L~-~~~L~~~l~v~N~g~~~~~f~~g~HpYF~ 137 (281)
+++.|++++.. +++|+|++.+.+ ..++|||+|+++++|+|. +++|++++++ +++++|||++|+||||+
T Consensus 108 ~~~~W~v~~~~--------~~~v~l~l~s~d-~~~gyPg~~~~~vtY~L~~~~~L~i~~~a--~~d~~tp~~lg~HpYFn 176 (339)
T 1lur_A 108 GYRKWEVVRHA--------PESVSFSVRANE-QDDGLPGDAKIDVTYTVNDRNQLIIEHHA--TCDTPGLLALTNHAYWN 176 (339)
T ss_dssp GGSBCEEEEEE--------TTEEEEEEEEEH-HHHSSSSEEEEEEEEEECTTSEEEEEEEE--ECSSCEECBCEECCEEC
T ss_pred ccceeeEEEcc--------CCEEEEEEECCC-cCCCCCeEEEEEEEEEECCCCeEEEEEEE--eCCCCeEEeeeccceEE
Confidence 58999998652 456999998755 578999999999999998 4899999999 58999999999999999
Q ss_pred cCC---CCeeEEEcCCCCccc--c--ccCccc-------cccccCceEEecc---------CcceEEcCC---C-----C
Q 023497 138 VSD---ISEVRVEGLETLDYF--D--YLMNKE-------RFTEQADAITFDG---------EIDRVYLST---P-----T 186 (281)
Q Consensus 138 v~~---~~~~~v~gl~~~~~~--d--~l~~~~-------~~~~~~~~l~~~~---------~~D~vy~~~---~-----~ 186 (281)
++. +.+.++. +....|+ | .++.++ .+.. .....+.. .+|++|... . .
T Consensus 177 l~~~~~i~~~~L~-i~a~~~~~~d~~~iPtg~~~~v~~t~~Df-~~~~~l~~~~~~~~~~~~~D~~f~~~~~~~~~~~~~ 254 (339)
T 1lur_A 177 LDGSDTVAEHFLE-MEADEFVEVDDTFCPTGAIRSVTDTGFDF-RSGKQLKESGKDAEELLDLDNDLVITKKTPPSTPST 254 (339)
T ss_dssp SSCCSCSTTCEEE-ECEEEEEEECTTSCEEEEEEECTTSTTCC-TTCEETTCSCCCSSCCCCCEEEEEECCCCC----CC
T ss_pred CCCCCcccCEEEE-EECCEEEEeCCCCccCCCEEccCCCcccc-cCceecCchhcccccCCCCccEEEeCCCCCCcccce
Confidence 984 4554453 3333444 2 222221 1100 11233332 689999642 2 3
Q ss_pred eEEEEeCCCCcEEEEEecCCCcEEEeCCcccccccCCCCC---CC--CCcceEEeccccc--------CCCeEeCCCCEE
Q 023497 187 KIAIIDHEKKRTFELRKDGMPDSVVWNPWDKKAKALPDMG---VD--GYKTMLCVDSAAI--------ENPIVLKPFEEW 253 (281)
Q Consensus 187 ~~~l~~~~~~~~i~i~~~~~~~~vvwnP~~~~~~~~~d~~---~~--~~~~~vCvEp~~~--------~~~~~L~pge~~ 253 (281)
.++|.++.++++|+|.++ +|.+|||+|+.. +.. +. ..+.|||||||+. .+.++|+|||++
T Consensus 255 ~a~l~~~~sg~~l~v~t~-~p~~~vyt~~~~------~~~g~~g~~y~~~~~vclEp~~~pDa~n~~~~~~~~L~pGe~~ 327 (339)
T 1lur_A 255 YLRFWSEKSGIELSITTS-YPVIHLYASKFL------DCKGKKGEHYKANKALAIEPQFHSAAPNFDHFPDVSLRPGDHY 327 (339)
T ss_dssp CEEEECTTTCEEEEEEES-SSEEEEECCTTC------CEECGGGCEECTTCCEEEEEESCTTGGGCTTSCCCEECTTCCE
T ss_pred EEEEEECCCCcEEEEEeC-CCEEEEECCCCc------cccCCCCcccCCCCEEEEeccCCCCccCCCCCCCeEECCCCEE
Confidence 578999999999999988 999999998621 111 01 1246999999984 256899999999
Q ss_pred EEEEEEEEEe
Q 023497 254 RGRQELSTVS 263 (281)
Q Consensus 254 ~~~~~i~~~~ 263 (281)
+.+++|++..
T Consensus 328 ~~~~~~~f~~ 337 (339)
T 1lur_A 328 CQEIVYTFSH 337 (339)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEEEE
Confidence 9999999864
No 13
>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A*
Probab=99.96 E-value=3.4e-28 Score=223.18 Aligned_cols=208 Identities=13% Similarity=0.189 Sum_probs=146.6
Q ss_pred ceEccccCCC-----------CCCc-------cceee---eccCeEEeecCCCCCCCCCccEEEEEecCChhhhccCCcc
Q 023497 40 PVCFPQFGNL-----------GLLE-------QHGFA---RNRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRG 98 (281)
Q Consensus 40 Pv~fP~~G~~-----------~~~p-------~HGfa---R~~~W~v~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~ 98 (281)
|+||||.||+ |.++ +||++ |++.|+++.... +.+.+|+|.+.+. ++.++|||+
T Consensus 63 ~~lgp~anRI~~g~f~~~G~~y~L~~N~~~n~lHGg~~g~~~~~W~v~~~~~-----~~~~~v~l~l~s~-d~~~gyPg~ 136 (347)
T 1nsx_A 63 ATVGPTAGRIKDGLVKISGKDYILNQNEGPQTLHGGEESIHTKLWTYEVTDL-----GAEVQVKFSLVSN-DGTNGYPGK 136 (347)
T ss_dssp CEECSBCSEEGGGEEEETTEEEECCCCBTTBEETTSTTCGGGSBCEEEEEEC-----SSEEEEEEEEEEC-TTGGGCCSC
T ss_pred eEEcccCCcccCCEEEECCEEEEccCCCCCcccCCCCcccccceEEEEEccC-----CcceEEEEEEECC-CccCCCCeE
Confidence 7999999986 3566 89999 999999987631 1123799999876 467899999
Q ss_pred eEEEEEEEEe-CCeeEEEEEEEeCCCCceeeeecCcceeecCC-----CCeeEEEcCCCCccc--c--c-cCcccccccc
Q 023497 99 FELRLRISIS-PGKLTLIPRVRNVDNKAFSFMFALRNYLSVSD-----ISEVRVEGLETLDYF--D--Y-LMNKERFTEQ 167 (281)
Q Consensus 99 f~l~~~~~L~-~~~L~~~l~v~N~g~~~~~f~~g~HpYF~v~~-----~~~~~v~gl~~~~~~--d--~-l~~~~~~~~~ 167 (281)
|+++++|+|. +++|+++++++ ++++|||++|+||||+++. +.+.++. +....|+ | . ++.++.....
T Consensus 137 ~~~~vtY~L~~~~~L~i~~~a~--~d~~tp~nlg~HpYFnl~g~~~~~i~~~~L~-i~a~~~~~~d~~~~iPtG~~~~v~ 213 (347)
T 1nsx_A 137 IEMSVTHSFDDDNKWKIHYEAI--SDKDTVFNPTGNVYFNLNGDASESVENHGLR-LAASRFVPLKDQTEIVRGDIVDIK 213 (347)
T ss_dssp EEEEEEEEEETTSEEEEEEEEE--ESSCEECBCEECCEECTTSSTTSCGGGSEEE-ECEEEECCBCSTTCCBCSCCEECT
T ss_pred EEEEEEEEECCCCeEEEEEEEE--cCCCeEEeeeccceEecCCCCCCceeceEEE-EECCeEEEECCCCcCcCCCeEecC
Confidence 9999999998 48999999997 7999999999999999983 3333332 1112232 2 2 3322211100
Q ss_pred ------CceEEec-------------cCcceEEcCCC-----CeEEEEeCCCCcEEEEEecCCCcEEEeCCcccccccCC
Q 023497 168 ------ADAITFD-------------GEIDRVYLSTP-----TKIAIIDHEKKRTFELRKDGMPDSVVWNPWDKKAKALP 223 (281)
Q Consensus 168 ------~~~l~~~-------------~~~D~vy~~~~-----~~~~l~~~~~~~~i~i~~~~~~~~vvwnP~~~~~~~~~ 223 (281)
.....+. +.+|++|.... ..++|.+ ++++|+|.++ +|.++||++... .
T Consensus 214 gt~~df~~~~~l~~~~~~~~~~~~~~~g~D~~f~l~~~~~~~~~a~l~~--sg~~l~v~t~-~p~lqvyt~~~~-----~ 285 (347)
T 1nsx_A 214 NTDLDFRQEKQLSNAFNSNMEQVQLVKGIDHPFLLDQLGLDKEQARLTL--DDTSISVFTD-QPSIVIFTANFG-----D 285 (347)
T ss_dssp TSTTCCSSCEEHHHHHHCCCHHHHHHTSCEEEEEESSCBTTSCCEEEEE--TTEEEEEEES-SSEEEEECCCCT-----T
T ss_pred CCcccccCCcccchhhccchhhhcccCCCCEEEEecCCCCceEEEEEEe--CCCEEEEEeC-CCEEEEECCCCC-----c
Confidence 0112221 25799996432 2577777 7899999987 999999997421 0
Q ss_pred C---CCC--CCCcceEEeccccc--------CCCeEeCCCCEEEEEEEEEEEec
Q 023497 224 D---MGV--DGYKTMLCVDSAAI--------ENPIVLKPFEEWRGRQELSTVSS 264 (281)
Q Consensus 224 d---~~~--~~~~~~vCvEp~~~--------~~~~~L~pge~~~~~~~i~~~~~ 264 (281)
. ..+ ...+.+||||||+. .+.++|+|||+++.+++|++...
T Consensus 286 ~g~~~~g~~~~~~~~vclEpq~~pDa~n~~~~~~~~L~pGe~~~~~~~~~f~~~ 339 (347)
T 1nsx_A 286 LGTLYHEKKQVHHGGITFECQVSPGSEQIPELGDISLKAGEKYQATTIYSLHTK 339 (347)
T ss_dssp CCCEETTEECCTTCCEECEEESCTTTTTCGGGCCCEECTTCEEEEEEEEEEEEC
T ss_pred cccccCCcccCCcCEEEEeccCCCCccCCCCCCCeEECCCCEEEEEEEEEEEec
Confidence 0 000 11245799999984 36789999999999999999654
No 14
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=99.95 E-value=1.7e-26 Score=229.40 Aligned_cols=210 Identities=10% Similarity=0.119 Sum_probs=150.6
Q ss_pred cceEccccCCC-----------CCCcc-------ceeee---ccCeEEeecCCCCCCCCCccEEEEEecCChhhhccCCc
Q 023497 39 IPVCFPQFGNL-----------GLLEQ-------HGFAR---NRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPR 97 (281)
Q Consensus 39 iPv~fP~~G~~-----------~~~p~-------HGfaR---~~~W~v~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~ 97 (281)
-++++||.||+ |.+++ |||+| ++.|+++..+. .+++..+|+|.+.+.++ .++|||
T Consensus 424 g~~l~~~~nRi~~g~f~~~G~~y~l~~n~~~~~lHG~~~g~~~~~w~~~~~~~---~~~~~~~~~~~~~~~~~-~~gyP~ 499 (699)
T 1z45_A 424 GATIGRYANRISKGKFSLCNKDYQLTVNNGVNANHSSIGSFHRKRFLGPIIQN---PSKDVFTAEYMLIDNEK-DTEFPG 499 (699)
T ss_dssp TCEECSBCSEEGGGEEEETTEEEECCCCBTTBEETTGGGCGGGSBCEEEEEEE---EETTEEEEEEEEEECGG-GSSSSS
T ss_pred ccccCcccCeecCcEEEECCEEEEccCCCCCcccCCCccccceeecceeeecc---CCCCcceEEEEEECCCc-CCCCCc
Confidence 46889999986 35665 99995 89999842210 00112379999988776 899999
Q ss_pred ceEEEEEEEEe--CCeeEEEEEEEeCCCCceeeeecCcceeecCC-----CCeeEEEcCCCCcccc----ccCccc----
Q 023497 98 GFELRLRISIS--PGKLTLIPRVRNVDNKAFSFMFALRNYLSVSD-----ISEVRVEGLETLDYFD----YLMNKE---- 162 (281)
Q Consensus 98 ~f~l~~~~~L~--~~~L~~~l~v~N~g~~~~~f~~g~HpYF~v~~-----~~~~~v~gl~~~~~~d----~l~~~~---- 162 (281)
+|+++++|+|. +++|+++++++|+++++|||++|+||||+++. +.+.++. +....|++ .++.++
T Consensus 500 ~~~~~v~y~L~~~~~~L~i~~~~~n~~~~~~p~~~~~H~yFnl~~~~~~~~~~~~l~-~~a~~~~~~d~~~iptg~~~~v 578 (699)
T 1z45_A 500 DLLVTIQYTVNVAQKSLEIVYKGKLTAGEATPINLTNHSYFNLNKPYGDTIEGTEIM-VRSKKSVDVDKNMIPTGNIVDR 578 (699)
T ss_dssp EEEEEEEEEEETTTTEEEEEEEEEEEESSEEECBCEECCEECTTTTSCSSSTTEEEE-ESCCEEEEECTTSCEEEEEEEC
T ss_pred eEEEEEEEEEecCCCEEEEEEEEEecCCCCceecccccceEeecCCCCCCccccEEE-EecCeEEecCCCCCCCCCcccC
Confidence 99999999999 79999999999999999999999999999982 4555553 33445542 222222
Q ss_pred ---cccc-cCceEEec-cCcceEEcCCC---------------CeEEEEeCCCCcEEEEEecCCCcEEEeCCcccccccC
Q 023497 163 ---RFTE-QADAITFD-GEIDRVYLSTP---------------TKIAIIDHEKKRTFELRKDGMPDSVVWNPWDKKAKAL 222 (281)
Q Consensus 163 ---~~~~-~~~~l~~~-~~~D~vy~~~~---------------~~~~l~~~~~~~~i~i~~~~~~~~vvwnP~~~~~~~~ 222 (281)
.+.. ....+... ..+|++|.... ..++|.++.++++|+|.++ +|.++||++...
T Consensus 579 ~~t~~df~~~~~l~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~l~v~~~-~p~~~~yt~~~~----- 652 (699)
T 1z45_A 579 EIATFNSTKPTVLGPKNPQFDCCFVVDENAKPSQINTLNNELTLIVKAFHPDSNITLEVLST-EPTYQFYTGDFL----- 652 (699)
T ss_dssp SCCBTTSSSCEEECSSCCCCEEEEESCSSCCCCCSBCTTSCCEEEEEEEETTTTEEEEEEES-SSEEEEECCTTC-----
T ss_pred cCCCcccCCcccccccCCCCCcceEccCccccccccccccccceeEEEEcCCCCCEEEEEEC-CCEEEEEeCCCC-----
Confidence 1110 11112211 37899996532 1378889999999999987 999999997421
Q ss_pred CCCCCCCCcceEEeccccc------C---CCeEeCCCCEEEEEEEEEE
Q 023497 223 PDMGVDGYKTMLCVDSAAI------E---NPIVLKPFEEWRGRQELST 261 (281)
Q Consensus 223 ~d~~~~~~~~~vCvEp~~~------~---~~~~L~pge~~~~~~~i~~ 261 (281)
.+ +.....+||||||.. . +.++|+|||+++.+++|++
T Consensus 653 ~~--~~~~~~~~clEp~~~pda~n~~~~~~~~~L~pge~~~~~~~~~f 698 (699)
T 1z45_A 653 SA--GYEARQGFAIEPGRYIDAINQENWKDCVTLKNGETYGSKIVYRF 698 (699)
T ss_dssp CT--TCCTTSCEEEEEESCSSGGGCTTTGGGGEEETTCEEEEEEEEEE
T ss_pred CC--CCCCCCEEEEecCCCCCccCcccCCCCcEECCCCEEEEEEEEEE
Confidence 00 111256899999953 1 4589999999999999987
No 15
>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus}
Probab=99.94 E-value=3e-26 Score=208.99 Aligned_cols=211 Identities=15% Similarity=0.232 Sum_probs=146.4
Q ss_pred ceEccccCCC-----------CCCcc-------ceee--eccCeEEeecCCCCCCCCCccEEEEEecCChhhhccCCcce
Q 023497 40 PVCFPQFGNL-----------GLLEQ-------HGFA--RNRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGF 99 (281)
Q Consensus 40 Pv~fP~~G~~-----------~~~p~-------HGfa--R~~~W~v~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f 99 (281)
++++||.||+ |.+++ ||++ +.+.|+++... ..++++|+|.+.+.+ ..++|||+|
T Consensus 69 ~~lgp~anRI~~g~f~~~G~~y~L~~N~g~n~LHGg~g~~~~~W~v~~~~-----~~~~~~v~l~l~s~d-~~~gyPg~~ 142 (338)
T 3imh_A 69 GTVGRIAGRVRAGQWKHGNEIHQLPLNDGDNHIHGGIGTDMHVWDFRPSC-----DSEHARVDLTLFDPD-GNNDYPGNL 142 (338)
T ss_dssp CEECSBCSEEGGGEEEETTEEEECCCCBTTBEETTSSCGGGSBCEEEEEE-----CSSEEEEEEEEEECT-TGGGCCSCE
T ss_pred eEEEeeCCEecCCEEEECCEEEECCCCCCCcCCCCCCCcCCceEEEEeee-----ecCCCEEEEEEECCc-cccCCCeEE
Confidence 5999999986 35665 9998 88999995421 124678999998754 478999999
Q ss_pred EEEEEEEEeC-CeeEEEEEEEeCCCCceeeeecCcceeecC-CCCeeEEEcCCCCccc--c--ccCccccccccCce---
Q 023497 100 ELRLRISISP-GKLTLIPRVRNVDNKAFSFMFALRNYLSVS-DISEVRVEGLETLDYF--D--YLMNKERFTEQADA--- 170 (281)
Q Consensus 100 ~l~~~~~L~~-~~L~~~l~v~N~g~~~~~f~~g~HpYF~v~-~~~~~~v~gl~~~~~~--d--~l~~~~~~~~~~~~--- 170 (281)
+++++|+|.+ ++|+++++++ +++++||++|+||||+++ ++.+.++. +....|+ | .++.++........
T Consensus 143 ~~~vtY~L~~~~~L~i~~~a~--~d~~tp~nlg~HpYFnL~g~i~~~~L~-i~a~~~~~~d~~~iPTG~~~~v~gt~~DF 219 (338)
T 3imh_A 143 KLHARYELDNENNLHYLLEAV--SDKLTIFNPVNHTYFNLGERAEDLNLQ-MNADYYLPVDEAGLPDRGMAEVAGTAFDF 219 (338)
T ss_dssp EEEEEEEEETTSEEEEEEEEE--ESSSEECBCEECCEECTTSCGGGCEEE-ECEEEECCBCTTSSBSSCCEECTTSTTCC
T ss_pred EEEEEEEEecCCeEEEEEEEe--cCCCeEEEEeeCCEEeCCCCcCCeEEE-EEcCcEEEeCCccCCcCceecCCCCcccC
Confidence 9999999997 6799999997 799999999999999998 34444443 2222232 2 23322211110111
Q ss_pred ----------------EEeccCcceEEcCCC--CeEEEEeCCCCcEEEEEecCCCcEEEeCCcccccccCCCCCCCCCcc
Q 023497 171 ----------------ITFDGEIDRVYLSTP--TKIAIIDHEKKRTFELRKDGMPDSVVWNPWDKKAKALPDMGVDGYKT 232 (281)
Q Consensus 171 ----------------l~~~~~~D~vy~~~~--~~~~l~~~~~~~~i~i~~~~~~~~vvwnP~~~~~~~~~d~~~~~~~~ 232 (281)
+.+.+.+|++|.... ..++|.+ ++++++|.++ .|.++||++...... ..-.....+.
T Consensus 220 r~~~~ig~~~~~~~~q~~~~~g~Dh~f~l~~~~~~a~l~~--sg~~l~v~t~-~p~~q~YTgn~l~~~--g~g~~~~~~~ 294 (338)
T 3imh_A 220 RKTKRIGDALNSDDSQIKLRNGLDHPFILNGNNPAALLSS--NKHRLIVKTN-APALVLYAGNHFNHT--GIVNNIGQYD 294 (338)
T ss_dssp SSCEEHHHHHTSCCHHHHHHTSCEEEEEECSCSCSEEEEC--SSEEEEEEES-SSEEEEECCTTCCSB--TTBTTCCTTS
T ss_pred CCCeEcchhhhccchhhcccCCCCCceeecCCceEEEEEC--CCeEEEEEeC-CCEEEEeCCCCcCCC--CCCcccCccC
Confidence 111236999996532 2466654 7899999876 799999998532111 1000122346
Q ss_pred eEEecccccC------CCeEeCCCCEEEEEEEEEEEec
Q 023497 233 MLCVDSAAIE------NPIVLKPFEEWRGRQELSTVSS 264 (281)
Q Consensus 233 ~vCvEp~~~~------~~~~L~pge~~~~~~~i~~~~~ 264 (281)
.|||||++.. +.++|+|||+++.++.++++..
T Consensus 295 g~clE~q~~P~n~~~f~~~vL~pGe~y~~~t~y~f~~~ 332 (338)
T 3imh_A 295 GITFEAQCPPAEGNDLGQITLLPFEKFKRTVDWKFEEG 332 (338)
T ss_dssp CEECEEESCCCSSSCCGGGEECTTCCEEEEEEEEEEEC
T ss_pred EEEEEccCCCCCCCCCCCeEECCCCEEEEEEEEEECCc
Confidence 8999999752 3489999999999999999873
No 16
>3ty1_A Hypothetical aldose 1-epimerase; supersandwich, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.90A {Klebsiella pneumoniae subsp}
Probab=99.83 E-value=9e-20 Score=169.11 Aligned_cols=196 Identities=11% Similarity=0.081 Sum_probs=127.7
Q ss_pred CccceeeeccCeEEeecCCCCCCCCCccEEEEEecCChhhhccCCcceEEEEEEEEeCCeeEEEEEEEeCCCCceeeeec
Q 023497 52 LEQHGFARNRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFELRLRISISPGKLTLIPRVRNVDNKAFSFMFA 131 (281)
Q Consensus 52 ~p~HGfaR~~~W~v~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~~~~L~~~~L~~~l~v~N~g~~~~~f~~g 131 (281)
++.||++++.+|+....+.. .++...++++....+....+|||.++.+++|+|.+++|+++.+|+|.++++|||.++
T Consensus 133 ~~LHG~~~~~pa~~~~~~~~---~~~~~~i~l~g~~~~~~~~G~~~~l~~~i~~~l~~~~l~i~~~VtN~g~~p~P~~~~ 209 (384)
T 3ty1_A 133 YTLHGKAGNTPASLVEVEVA---DSAPYEIRIRGLVKESTFKKADLQTLTELRYVPGSNSFSLHDVLTNHADYPHDYQII 209 (384)
T ss_dssp ECTTCSGGGSCCSEEEEEEE---SSTTCCEEEEEEEEEEETTTEEEEEEEEEEECTTCSEEEEEEEEEECSSSCEEEEEE
T ss_pred ccccccccCCCcceeEEEec---CCCceEEEEEEEEEEeeeccCCEEEEEEEEEEeCCCEEEEEEEEEECCCCCCchhee
Confidence 68999999999544321100 112345666655555556788999999999999999999999999999999999999
Q ss_pred CcceeecCCC-CeeEEEcCCCCcccc---ccCccc-cccccCceEEeccCcceEE-c----CCCC--eEEEEeCCCCcEE
Q 023497 132 LRNYLSVSDI-SEVRVEGLETLDYFD---YLMNKE-RFTEQADAITFDGEIDRVY-L----STPT--KIAIIDHEKKRTF 199 (281)
Q Consensus 132 ~HpYF~v~~~-~~~~v~gl~~~~~~d---~l~~~~-~~~~~~~~l~~~~~~D~vy-~----~~~~--~~~l~~~~~~~~i 199 (281)
.|+||..+-. ++.++.- +....+. ...... .+....... ..-.+.+| . +..+ .+.|.++..+..+
T Consensus 210 ~H~nfg~Pll~~g~rl~~-p~~~~~p~~~~~~~~l~~~~~~~~p~--~~~~E~vf~~d~~~d~~G~~~~~l~n~~~g~~~ 286 (384)
T 3ty1_A 210 YHSNFGTPILEEGARFLA-PISSISPFNDYAKSGLKTWQTYQGPT--KDFDEMVFNIQPLADENHQTLAAVVNKAGDKGA 286 (384)
T ss_dssp EEEEECTTTCCTTCEEEC-CEEEEEESSGGGGGGSTTTTBCCCCC--TTCCCEEEEEEECCCTTSEEEEEEECSSSSCEE
T ss_pred cccccCCCccCCCcEEEe-ccceeccccccccccccchhhccCCC--CCCCceEEEEeccccCCCceEEEEEecCCCcEE
Confidence 9999998732 3444431 1111111 000000 000000000 11113444 1 1223 3778888888999
Q ss_pred EEEe--cCCCcEEEeCCcccccccCCCCCCCCCcceE-Eeccccc-----------CCCeEeCCCCEEEEEEEEEEEec
Q 023497 200 ELRK--DGMPDSVVWNPWDKKAKALPDMGVDGYKTML-CVDSAAI-----------ENPIVLKPFEEWRGRQELSTVSS 264 (281)
Q Consensus 200 ~i~~--~~~~~~vvwnP~~~~~~~~~d~~~~~~~~~v-CvEp~~~-----------~~~~~L~pge~~~~~~~i~~~~~ 264 (281)
.++. +.||++++|+.-.. .+ +.|+ ||||++. .+++.|+|||+++++++|++...
T Consensus 287 ~l~f~~~~fP~l~~W~~~~~----------~~-~gyvl~LEP~T~~p~~~~~~~~~g~l~~L~PGes~~~~~~i~v~~~ 354 (384)
T 3ty1_A 287 SIQFDTRQLPVLTLWKNTDT----------VK-QGYVTGIEPGTSYAYPVTIERKQKRVKQLQPGASAQFDLTYTLLHD 354 (384)
T ss_dssp EEEEETTTSCEEEEEEEESC----------TT-TCEEEEEEEESSCSSCHHHHHHTTCCEEECTTCEEEEEEEEEEECS
T ss_pred EEEEchHHCCHhHhhcccCC----------CC-CccEEEEeCccCCCchhHHHHhCCCeEEECCCCEEEEEEEEEEecC
Confidence 8876 56899999997210 01 2265 9999985 37999999999999999998653
No 17
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=86.01 E-value=0.72 Score=33.51 Aligned_cols=41 Identities=12% Similarity=0.245 Sum_probs=28.6
Q ss_pred EEEEeCCeeEEEEEEEeCCCCceeeeecCcceeecCCCCeeEEE
Q 023497 104 RISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVSDISEVRVE 147 (281)
Q Consensus 104 ~~~L~~~~L~~~l~v~N~g~~~~~f~~g~HpYF~v~~~~~~~v~ 147 (281)
.++|..+.=+++++|+|+||. |.+.|-|.+|.=.+ ..+.|+
T Consensus 12 ~I~lN~gr~~~~l~V~NtGDR--PIQVGSHyHF~E~N-~aL~FD 52 (101)
T 4ep8_B 12 QIALNTGRATCRVVVENHGDR--PIQVGSHYHFAEVN-PALKFD 52 (101)
T ss_dssp EEECSTTCCEEEEEEEECSSS--CEEEETTSCGGGSC-TTEESC
T ss_pred cEEEcCCCCEEEEEEEeCCCc--ceEEccccChhHcC-cceeec
Confidence 356777777899999999999 55667777775332 235554
No 18
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=80.63 E-value=1.2 Score=33.68 Aligned_cols=41 Identities=17% Similarity=0.242 Sum_probs=28.2
Q ss_pred EEEEeCCeeEEEEEEEeCCCCceeeeecCcceeecCCCCeeEEE
Q 023497 104 RISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVSDISEVRVE 147 (281)
Q Consensus 104 ~~~L~~~~L~~~l~v~N~g~~~~~f~~g~HpYF~v~~~~~~~v~ 147 (281)
.++|..+.=+++++|+|+||. |.+.|-|-+|.=.+ ..+.|+
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDR--PIQVGSHyHF~E~N-~aL~FD 58 (126)
T 4ubp_B 18 EIEINAGREKTTIRVSNTGDR--PIQVGSHIHFVEVN-KELLFD 58 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSS--CEEEETTSCGGGSC-TTEESC
T ss_pred CEEeCCCCcEEEEEEEeCCCC--CEEEccccchhhcC-chhhcc
Confidence 467777777899999999999 55666776664322 234554
No 19
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=80.63 E-value=1.2 Score=33.68 Aligned_cols=41 Identities=17% Similarity=0.242 Sum_probs=28.2
Q ss_pred EEEEeCCeeEEEEEEEeCCCCceeeeecCcceeecCCCCeeEEE
Q 023497 104 RISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVSDISEVRVE 147 (281)
Q Consensus 104 ~~~L~~~~L~~~l~v~N~g~~~~~f~~g~HpYF~v~~~~~~~v~ 147 (281)
.++|..+.=+++++|+|+||. |.+.|-|-+|.=.+ ..+.|+
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDR--PIQVGSHyHF~E~N-~aL~FD 58 (126)
T 4ac7_B 18 EIEINAGREKTTIRVSNTGDR--PIQVGSHIHFVEVN-KELLFD 58 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSS--CEEEETTSCGGGSC-TTEESC
T ss_pred CEEeCCCCcEEEEEEEeCCCC--CEEEccccchhhcC-chhhcc
Confidence 467777777899999999999 55666776664322 234554
No 20
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=77.83 E-value=5 Score=30.24 Aligned_cols=33 Identities=18% Similarity=0.352 Sum_probs=26.8
Q ss_pred ceEEEEEEEEeCCeeEEEEEEEeCCCCceeeee
Q 023497 98 GFELRLRISISPGKLTLIPRVRNVDNKAFSFMF 130 (281)
Q Consensus 98 ~f~l~~~~~L~~~~L~~~l~v~N~g~~~~~f~~ 130 (281)
.+.+++++.-.++.+.+.++|+|.++++..+.+
T Consensus 6 ~l~~~v~~~~~g~~v~~~ltv~N~s~~~v~l~f 38 (120)
T 3isy_A 6 EVVLSIDAIQEPEQIKFNMSLKNQSERAIEFQF 38 (120)
T ss_dssp SEEEEEEEEECSSCEEEEEEEEECSSSCEEEEE
T ss_pred EEEEEEeeccCCCeEEEEEEEEcCCCCcEEEEe
Confidence 456677777778899999999999999877654
No 21
>3qga_A UREA2, fusion of urease beta and gamma subunits; iron metalloenzyme, alpha-beta barrel, hydrolase; HET: FME KCX; 3.00A {Helicobacter mustelae} PDB: 3qgk_A*
Probab=63.34 E-value=3.9 Score=33.95 Aligned_cols=41 Identities=17% Similarity=0.169 Sum_probs=28.2
Q ss_pred EEEEeCCeeEEEEEEEeCCCCceeeeecCcceeecCCCCeeEEE
Q 023497 104 RISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVSDISEVRVE 147 (281)
Q Consensus 104 ~~~L~~~~L~~~l~v~N~g~~~~~f~~g~HpYF~v~~~~~~~v~ 147 (281)
.++|..+.=+++++|+|+||. |.+.|-|.+|.=.+ ..+.|+
T Consensus 117 ~I~lN~gr~~~~l~V~NtGDR--PIQVGSHyHF~E~N-~aL~FD 157 (225)
T 3qga_A 117 DIELNAGKEITELKVTNKGPK--SLHVGSHFHFFEAN-RALEFD 157 (225)
T ss_dssp CEETTTTCCCEEEEEEECSSS--CEEEETTSCGGGSC-TTEESC
T ss_pred ceecCCCCceEEEEEEECCCC--ceeeccccchhhcC-chhhcc
Confidence 467777777899999999999 55666676665322 234554
No 22
>1e9y_A Urease subunit alpha; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.85.3.1 d.8.1.1 PDB: 1e9z_A*
Probab=61.27 E-value=4.1 Score=34.09 Aligned_cols=41 Identities=17% Similarity=0.253 Sum_probs=28.0
Q ss_pred EEEEeCCeeEEEEEEEeCCCCceeeeecCcceeecCCCCeeEEE
Q 023497 104 RISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVSDISEVRVE 147 (281)
Q Consensus 104 ~~~L~~~~L~~~l~v~N~g~~~~~f~~g~HpYF~v~~~~~~~v~ 147 (281)
.++|..+.=+++++|+|+||. |.+.|-|.+|.=-+ ..+.|+
T Consensus 117 ~I~lN~gr~~~~l~V~NtGDR--PIQVGSHyHF~E~N-~aL~FD 157 (238)
T 1e9y_A 117 DITINEGKKAVSVKVKNVGDR--PVQIGSHFHFFEVN-RCLDFD 157 (238)
T ss_dssp EEETTTTCCCCEEEEEECSSS--CEEEETTSCGGGSC-TTEESC
T ss_pred CeeeCCCCCeEEEEEEeCCCC--ceEeccccchHhcC-cccccc
Confidence 477777667899999999999 55566676665322 234554
No 23
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=60.41 E-value=8.8 Score=34.43 Aligned_cols=28 Identities=7% Similarity=0.094 Sum_probs=24.4
Q ss_pred EEEEEEEeCCeeEEEEEEEeCCCCceee
Q 023497 101 LRLRISISPGKLTLIPRVRNVDNKAFSF 128 (281)
Q Consensus 101 l~~~~~L~~~~L~~~l~v~N~g~~~~~f 128 (281)
...+|++-+.+|+++++|+|.|++|..+
T Consensus 255 ~~A~Y~vpgR~l~~~~~VtN~g~~pvrl 282 (382)
T 1yew_A 255 EDATYRVPGRAMRMKLTITNHGNSPIRL 282 (382)
T ss_dssp EEEEEESSCSEEEEEEEEEECSSSCEEE
T ss_pred eccEEecCCcEEEEEEEEEcCCCCceEe
Confidence 4578999899999999999999998743
No 24
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=59.28 E-value=8.4 Score=34.91 Aligned_cols=28 Identities=14% Similarity=0.118 Sum_probs=24.3
Q ss_pred EEEEEEEeCCeeEEEEEEEeCCCCceee
Q 023497 101 LRLRISISPGKLTLIPRVRNVDNKAFSF 128 (281)
Q Consensus 101 l~~~~~L~~~~L~~~l~v~N~g~~~~~f 128 (281)
...+|++-+++|+++++|+|.|++|..+
T Consensus 289 ~~A~Y~vpgR~l~~~~~VtN~g~~pvrl 316 (419)
T 3rfr_A 289 NGGVYKVPGRELTINVKVKNGTSQPVRL 316 (419)
T ss_dssp EEEEEESSSSEEEEEEEEECCSSSCBEE
T ss_pred eceEEecCCcEEEEEEEEecCCCCceEE
Confidence 3568999999999999999999998743
No 25
>3bs6_A Inner membrane protein OXAA; YIDC/OXA1/ALB3 family, membrane insertion, chaperone, SEC translocon, periplasmic domain, beta supersandwich fold; HET: PG4 PGE 2PE; 1.80A {Escherichia coli}
Probab=49.29 E-value=58 Score=27.70 Aligned_cols=44 Identities=14% Similarity=0.232 Sum_probs=31.4
Q ss_pred ccEEEEEecCChhhhccCCcceEEEEEEEEeCC--eeEEEEEEEeCCCCceeee
Q 023497 78 QSTVDLILKSTEEDIKAWPRGFELRLRISISPG--KLTLIPRVRNVDNKAFSFM 129 (281)
Q Consensus 78 ~~~v~l~l~~~~~~~~~~P~~f~l~~~~~L~~~--~L~~~l~v~N~g~~~~~f~ 129 (281)
...|+|++.... ...++.+|+|..+ .+.++++|.|.+.+++...
T Consensus 91 ~~~Vtlt~~~~~--------G~~~~ktytf~~~~Y~i~v~~~v~N~s~~~~~~~ 136 (280)
T 3bs6_A 91 ELQVPMTYTDAA--------GNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEIS 136 (280)
T ss_dssp EEEEEEEEECTT--------CCEEEEEEEEETTCCEEEEEEEEECCSSSCEEEE
T ss_pred eeEEEEEEECCC--------CeEEEEEEEEcCCceEEEEEEEEEcCCCCceeEe
Confidence 356777765422 3689999999853 4777788889998866544
No 26
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*
Probab=46.42 E-value=49 Score=32.52 Aligned_cols=57 Identities=18% Similarity=0.271 Sum_probs=41.7
Q ss_pred ccEEEEEecCChhhhccCCcceEEEEEEEEeC--CeeEEEEEEEeCCCCceeeeecCcceeecCCC
Q 023497 78 QSTVDLILKSTEEDIKAWPRGFELRLRISISP--GKLTLIPRVRNVDNKAFSFMFALRNYLSVSDI 141 (281)
Q Consensus 78 ~~~v~l~l~~~~~~~~~~P~~f~l~~~~~L~~--~~L~~~l~v~N~g~~~~~f~~g~HpYF~v~~~ 141 (281)
..++++.|.+.. ..+++++.|++.+ +-++...+|+|+|++++...-..-..+.++..
T Consensus 130 ~~~l~i~l~D~~-------~~l~v~l~y~~~~~~~vi~~~~~i~N~g~~~v~l~~~~s~~l~~~~~ 188 (729)
T 4fnq_A 130 AETLEIVLGDAL-------IGLEVTLQYTAYEKWNVITRAARFENKGGERLKLLRALSMSVDFPTA 188 (729)
T ss_dssp EEEEEEEEEETT-------TTEEEEEEEEEESSSSEEEEEEEEEECSSSCEEEEEEEEEEEEESCC
T ss_pred ceEEEEEEEeCC-------CCeEEEEEEEEECCCCEEEEEEEEEECCCCCEEEeEeeeecCcCCCC
Confidence 455666776532 3688999999976 67888899999999988776655555666643
No 27
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=46.35 E-value=13 Score=37.38 Aligned_cols=31 Identities=10% Similarity=0.255 Sum_probs=23.9
Q ss_pred EEEEeCCeeEEEEEEEeCCCCceeeeecCccee
Q 023497 104 RISISPGKLTLIPRVRNVDNKAFSFMFALRNYL 136 (281)
Q Consensus 104 ~~~L~~~~L~~~l~v~N~g~~~~~f~~g~HpYF 136 (281)
.++|..++=+++++|+|+||.|+. .|-|.+|
T Consensus 143 ~~~~~~~~~~~~~~v~~~~~r~~~--v~sh~hf 173 (840)
T 4gy7_A 143 CLTLNIGRKAVILKVTSKGDRPIQ--VGSHYHF 173 (840)
T ss_dssp EEECSCSCEEEEEEEEECCSSCEE--EETTSCG
T ss_pred ceEecCCCceEEEEEEeCCCCceE--eccccch
Confidence 577777888999999999999555 5555554
No 28
>2wnx_A Glycoside hydrolase, family 9; cellulose degradation; 1.31A {Clostridium thermocellum} PDB: 2wo4_A 2wob_A
Probab=43.08 E-value=49 Score=26.24 Aligned_cols=33 Identities=6% Similarity=0.219 Sum_probs=27.9
Q ss_pred CeeEEEEEEEeCCCCceeee-ecCcceeecCCCC
Q 023497 110 GKLTLIPRVRNVDNKAFSFM-FALRNYLSVSDIS 142 (281)
Q Consensus 110 ~~L~~~l~v~N~g~~~~~f~-~g~HpYF~v~~~~ 142 (281)
+.+++.+.|+|++..+..+. +-+.-||..+...
T Consensus 27 n~i~~~~~I~N~g~~~i~Ls~lkiRYyft~d~~~ 60 (170)
T 2wnx_A 27 NTIRATINIKNTGTTPVNLSDIKVRYWFTSDGNE 60 (170)
T ss_dssp CEEEEEEEEEECSSSCEEGGGEEEEEEECCTTCS
T ss_pred CEEEEEEEEEECCCCceecCcEEEEEEEcCCCCc
Confidence 67999999999999987755 8899999987643
No 29
>3zqx_A Cellulose 1,4-beta-cellobiosidase; hydrolase, cellulose binding protein; 1.04A {Clostridium thermocellum} PDB: 2ylk_A
Probab=42.41 E-value=50 Score=25.54 Aligned_cols=46 Identities=15% Similarity=0.288 Sum_probs=34.0
Q ss_pred EEEEEEEe-----CCeeEEEEEEEeCCCCceeee-ecCcceeecCCCCeeEE
Q 023497 101 LRLRISIS-----PGKLTLIPRVRNVDNKAFSFM-FALRNYLSVSDISEVRV 146 (281)
Q Consensus 101 l~~~~~L~-----~~~L~~~l~v~N~g~~~~~f~-~g~HpYF~v~~~~~~~v 146 (281)
|++.|+-. .+.++..+.|+|++..+.... +-+.-||..+...+..+
T Consensus 3 l~vqy~~~~~~~~~n~i~~~~~I~N~g~~~i~Ls~lkiRYyft~d~~~~~~~ 54 (146)
T 3zqx_A 3 VKVQYLCENTQTSTQEIKGKFNIVNTGNRDYSLKDIVLRYYFTKEHNSQLQF 54 (146)
T ss_dssp EEEEEEESCCCSEESCEEEEEEEEECSSCCEEGGGEEEEEECCCCCCSCEEE
T ss_pred EEEEEEcCCCCCCCCEEeEEEEEEECCCceEEcCcEEEEEEEecCCCccEEE
Confidence 45555543 256999999999998887765 78999998876555555
No 30
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A*
Probab=41.99 E-value=59 Score=31.90 Aligned_cols=56 Identities=16% Similarity=0.230 Sum_probs=39.8
Q ss_pred ccEEEEEecCChhhhccCCcceEEEEEEEEeC--CeeEEEEEEEeCCCCceeeeecCcceeecCC
Q 023497 78 QSTVDLILKSTEEDIKAWPRGFELRLRISISP--GKLTLIPRVRNVDNKAFSFMFALRNYLSVSD 140 (281)
Q Consensus 78 ~~~v~l~l~~~~~~~~~~P~~f~l~~~~~L~~--~~L~~~l~v~N~g~~~~~f~~g~HpYF~v~~ 140 (281)
...+++.|.+.. ..+++++.|++.+ +-++...+++|++++++...-..=.-+.++.
T Consensus 130 ~~~l~i~l~D~~-------~~l~v~l~y~~~~~~~vi~~~~~i~N~g~~~~~l~~~~s~~l~~~~ 187 (720)
T 2yfo_A 130 AQTLEIVLADEN-------AQVEVHLLYGVLEENDVITRSVRIKNTGTGQITIEKAAAACLDFVQ 187 (720)
T ss_dssp EEEEEEEEEETT-------TTEEEEEEEEEETTTTEEEEEEEEEECSSSCEEEEEEEEEEEEESS
T ss_pred CcEEEEEEEECC-------CCEEEEEEEEEECCCCEEEEEEEEEECCCCCEEEeeeecccccCCC
Confidence 445777776532 3578999999987 5799999999999988765554443444443
No 31
>3blc_A Inner membrane protein OXAA; YIDC, membrane assembly facilitator, chaperone, periplasmic inner membrane, transmembrane; 2.50A {Escherichia coli K12}
Probab=40.55 E-value=96 Score=27.04 Aligned_cols=42 Identities=14% Similarity=0.241 Sum_probs=29.9
Q ss_pred cEEEEEecCChhhhccCCcceEEEEEEEEeCC--eeEEEEEEEeCCCCceee
Q 023497 79 STVDLILKSTEEDIKAWPRGFELRLRISISPG--KLTLIPRVRNVDNKAFSF 128 (281)
Q Consensus 79 ~~v~l~l~~~~~~~~~~P~~f~l~~~~~L~~~--~L~~~l~v~N~g~~~~~f 128 (281)
..|+|+..... ...++.+|+|..+ .+.++++|.|.+.+++..
T Consensus 123 ~~v~lt~~~~~--------G~~v~k~ytf~~~~Y~i~v~~~v~N~s~~~~~~ 166 (330)
T 3blc_A 123 LQVPMTYTDAA--------GNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEI 166 (330)
T ss_dssp EEEEEEEECTT--------SCEEEEEEEEETTCCEEEEEEEEECCSSSCEEE
T ss_pred EEEEEEEECCC--------CeEEEEEEEEcCCceEEEEEEEEEcCCCCccee
Confidence 55666664322 3689999999864 477778899999886644
No 32
>2xbt_A Cellulosomal scaffoldin; sugar binding protein; 1.83A {Bacteroides cellulosolvens}
Probab=40.25 E-value=38 Score=26.64 Aligned_cols=34 Identities=9% Similarity=0.324 Sum_probs=28.0
Q ss_pred CeeEEEEEEEeCCCCceeee-ecCcceeecCCCCe
Q 023497 110 GKLTLIPRVRNVDNKAFSFM-FALRNYLSVSDISE 143 (281)
Q Consensus 110 ~~L~~~l~v~N~g~~~~~f~-~g~HpYF~v~~~~~ 143 (281)
+.+++.+.|+|++..+..+. +-++-||..+....
T Consensus 24 n~i~~~~~I~N~g~~~i~Ls~lkiRYyft~d~~~~ 58 (160)
T 2xbt_A 24 NQIYMNMKLQNTGSSTYDLSKITIRYFYTSDDDKA 58 (160)
T ss_dssp SSEEEEEEEEECSSCCEEGGGEEEEEEECCSSCCC
T ss_pred CEEEEEEEEEECCCCceecCcEEEEEEEeCCCCce
Confidence 67999999999999887754 88999999876433
No 33
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*
Probab=35.98 E-value=60 Score=31.90 Aligned_cols=55 Identities=16% Similarity=0.092 Sum_probs=38.8
Q ss_pred cEEEEEecCChhhhccCCcceEEEEEEEEeC--CeeEEEEEEEeCCCCceeeeecCcceeecCC
Q 023497 79 STVDLILKSTEEDIKAWPRGFELRLRISISP--GKLTLIPRVRNVDNKAFSFMFALRNYLSVSD 140 (281)
Q Consensus 79 ~~v~l~l~~~~~~~~~~P~~f~l~~~~~L~~--~~L~~~l~v~N~g~~~~~f~~g~HpYF~v~~ 140 (281)
..+++.|.+.. ..+++++.|++.+ +-++...+++|++++++...-..=.-+.++.
T Consensus 135 ~~l~i~l~D~~-------~~l~v~l~y~~~~~~~~i~~~~~i~N~g~~~~~l~~~~s~~l~~p~ 191 (732)
T 2xn2_A 135 QTLIVTLEDKV-------SKLEYDLLYTIYRDRPVIVRSVQVHNHGEEAVYLEKVASMQMDYVD 191 (732)
T ss_dssp EEEEEEEEETT-------TTEEEEEEEEEETTSSEEEEEEEEEECSSSCEEEEEEEEEEEEESS
T ss_pred cEEEEEEEeCC-------CCEEEEEEEEEECCCCEEEEEEEEEECcCCcEEEeEEeeccccCCC
Confidence 45667776532 3578999999987 5688899999999988665554443445543
No 34
>3zuc_A Cellulosomal scaffoldin; crystalline cellulose-binding protein, sugar binding protein cellulosome; HET: EDO 1PE; 1.00A {Acetivibrio cellulolyticus} SCOP: b.2.2.0 PDB: 3zu8_A* 3zqw_A*
Probab=34.84 E-value=64 Score=25.14 Aligned_cols=33 Identities=18% Similarity=0.256 Sum_probs=27.3
Q ss_pred CeeEEEEEEEeCCCCceeee-ecCcceeecCCCC
Q 023497 110 GKLTLIPRVRNVDNKAFSFM-FALRNYLSVSDIS 142 (281)
Q Consensus 110 ~~L~~~l~v~N~g~~~~~f~-~g~HpYF~v~~~~ 142 (281)
+.++..++|+|+|..++.+. +.+.-||..+...
T Consensus 20 n~I~~~~~I~Ntg~~~i~Ls~vkiRYyfT~dg~~ 53 (153)
T 3zuc_A 20 NSIYPKFRLTNTGSNAINLADVKLHYYFTVDGDK 53 (153)
T ss_dssp SCBCEEEEEEECSSSCEEGGGCEEEEEECCSSCC
T ss_pred CEEeeEEEEEECCCCcEEccceEEEEEEecCCCc
Confidence 67999999999999988876 7789999876443
No 35
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.49 E-value=31 Score=25.29 Aligned_cols=39 Identities=23% Similarity=0.169 Sum_probs=32.0
Q ss_pred EEEEEEEeCCeeEEEEEEEeCCCCceeeeecCcceeecC
Q 023497 101 LRLRISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVS 139 (281)
Q Consensus 101 l~~~~~L~~~~L~~~l~v~N~g~~~~~f~~g~HpYF~v~ 139 (281)
+.+-...-+..-+..+.++|.|+.+..|.+-..+.|.+.
T Consensus 32 l~fg~~~v~~~~~~~~~l~N~g~~~~~f~~~~~~~F~i~ 70 (122)
T 2ys4_A 32 LNFSTCPVKYSTQKILLVRNIGNKNAVFHIKTCRPFSIE 70 (122)
T ss_dssp ECCCSEESSSCEEEEEEEECCSSSCEEEEEECCTTEEEE
T ss_pred eecCCeecCCeEEEEEEEEECCCCCEEEEEecCCCeEEE
Confidence 444556667778999999999999999998888888875
No 36
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis}
Probab=33.54 E-value=96 Score=30.61 Aligned_cols=55 Identities=20% Similarity=0.260 Sum_probs=38.2
Q ss_pred ccEEEEEecCChhhhccCCcceEEEEEEEEeC--CeeEEEEEEEeCCCCceeeeecCcceeecC
Q 023497 78 QSTVDLILKSTEEDIKAWPRGFELRLRISISP--GKLTLIPRVRNVDNKAFSFMFALRNYLSVS 139 (281)
Q Consensus 78 ~~~v~l~l~~~~~~~~~~P~~f~l~~~~~L~~--~~L~~~l~v~N~g~~~~~f~~g~HpYF~v~ 139 (281)
...+++.|.+.. ..+++++.|++.+ +-++...+|+|++++++...-..=..+.++
T Consensus 131 ~~~l~i~l~D~~-------~~l~v~l~y~~~~~~~vi~~~~~i~N~g~~~v~l~~~~S~~l~~p 187 (745)
T 3mi6_A 131 AQTLVVSFNDRI-------TGLALDLNYSIFPHQDVIVKSAKFTNPSSEKLVLNRALSSQLDLP 187 (745)
T ss_dssp CEEEEEEEEETT-------TCCEEEEEEEEEGGGTEEEEEEEEECCSSSCEEEEEEEEEEEEES
T ss_pred CCEEEEEEEeCC-------CCeEEEEEEEEECCCCEEEEEEEEEECCCCCEEeeeecccccCCC
Confidence 456777776532 3578899999876 678888999999999876654433334444
No 37
>2ab9_A Pro-SFTI-1; protein, beta-sheet, random coil, hydrolase inhibitor; NMR {Helianthus annuus}
Probab=31.32 E-value=8.7 Score=20.74 Aligned_cols=6 Identities=67% Similarity=1.896 Sum_probs=5.2
Q ss_pred cceEcc
Q 023497 39 IPVCFP 44 (281)
Q Consensus 39 iPv~fP 44 (281)
-|||||
T Consensus 22 ppicfp 27 (31)
T 2ab9_A 22 PPICFP 27 (31)
T ss_dssp SCSSSS
T ss_pred CCcccC
Confidence 589999
No 38
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=30.82 E-value=44 Score=22.05 Aligned_cols=20 Identities=10% Similarity=0.132 Sum_probs=15.2
Q ss_pred ceEEEEEEEEeCCeeEEEEE
Q 023497 98 GFELRLRISISPGKLTLIPR 117 (281)
Q Consensus 98 ~f~l~~~~~L~~~~L~~~l~ 117 (281)
.|.-+++|+|+++.|++.++
T Consensus 28 kfagtvtytldgndleirit 47 (85)
T 2kl8_A 28 KFAGTVTYTLDGNDLEIRIT 47 (85)
T ss_dssp TTTCEEEEEECSSCEEEEEE
T ss_pred hhcceEEEEecCCeeEEEEe
Confidence 34568899999988887653
No 39
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1
Probab=27.72 E-value=1.2e+02 Score=24.21 Aligned_cols=40 Identities=23% Similarity=0.566 Sum_probs=25.3
Q ss_pred cCCCcEEEeCCcccccccCCCCCCCCCcceEEecccccCCCeEeCCCCEEEEEEEE
Q 023497 204 DGMPDSVVWNPWDKKAKALPDMGVDGYKTMLCVDSAAIENPIVLKPFEEWRGRQEL 259 (281)
Q Consensus 204 ~~~~~~vvwnP~~~~~~~~~d~~~~~~~~~vCvEp~~~~~~~~L~pge~~~~~~~i 259 (281)
.+.+...+||||. ....|+-+- ...+.|.-|-.++-..+|
T Consensus 132 ng~~~y~~WNPW~--------------~~~~~~s~~--s~~i~l~~g~~y~W~~s~ 171 (174)
T 1cv8_A 132 NGQEVIIIWNPWD--------------NGFMTQDAK--NNVIPVSNGDHYQWYSSI 171 (174)
T ss_dssp TSCEEEEEECTTC--------------SSCEEEETT--CCEEECTTSCEEEEEEEE
T ss_pred CCceEEEEeCCcc--------------CCcEEecCC--CCeEEecCCCeeEEeeee
Confidence 4567899999994 456666553 235566556665554443
No 40
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=27.63 E-value=46 Score=26.69 Aligned_cols=48 Identities=15% Similarity=0.346 Sum_probs=29.5
Q ss_pred CcEEEEE----ecCCCcEEEeCCcccccccCCCCCCCCCcceEEecccccCCCeEeCCCCEEEEEEEE
Q 023497 196 KRTFELR----KDGMPDSVVWNPWDKKAKALPDMGVDGYKTMLCVDSAAIENPIVLKPFEEWRGRQEL 259 (281)
Q Consensus 196 ~~~i~i~----~~~~~~~vvwnP~~~~~~~~~d~~~~~~~~~vCvEp~~~~~~~~L~pge~~~~~~~i 259 (281)
|+.|.|. ..+.+...+||||. ..+.|+-+. ...+.|..|-.++-..+|
T Consensus 129 gHA~av~Gya~~~~~~~y~~WNPW~--------------~~~~~~~a~--S~~i~l~~g~~y~W~~si 180 (183)
T 1pxv_A 129 GHALAVVGNAKINDQEKLIYWNPWD--------------TELSIQDAD--SSLLHLSFNRDYNWYGSM 180 (183)
T ss_dssp EEEEEEEEEEEETTEEEEEEECTTC--------------SSCEEEETT--CCEEEEGGGEEEEEEEEE
T ss_pred ceeEEEEeeeecCCCeEEEEeCCcc--------------CCcEeecCC--CCeEEecCCCeeEEeeee
Confidence 4455543 23456799999994 557776643 234677677666655544
No 41
>3ndz_E Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_E*
Probab=27.34 E-value=82 Score=22.84 Aligned_cols=35 Identities=6% Similarity=0.109 Sum_probs=22.3
Q ss_pred EEEEEEeC---CeeEEEEEEEeCCCCceeeeecCcceeecC
Q 023497 102 RLRISISP---GKLTLIPRVRNVDNKAFSFMFALRNYLSVS 139 (281)
Q Consensus 102 ~~~~~L~~---~~L~~~l~v~N~g~~~~~f~~g~HpYF~v~ 139 (281)
+++|++.. .+...+++|+|+++.++. +|---|.++
T Consensus 4 ~v~y~v~~~W~~Gf~~~vtVtN~g~~~i~---gWtv~~~~p 41 (107)
T 3ndz_E 4 EVTYAITNSWGSGASVNVTIKNNGTTPIN---GWTLKWTMP 41 (107)
T ss_dssp EEEEEEEEECSSEEEEEEEEEECSSSCEE---SCEEEEECC
T ss_pred EEEEEEcccCCCCEEEEEEEEeCCCCccc---CcEEEEEcC
Confidence 44555432 678888889999888653 444445554
No 42
>1f2r_I Inhibitor of caspase-activated DNAse; alpha-beta roll, protein-protein complex, DNA binding protein; NMR {Mus musculus} SCOP: d.15.2.1
Probab=25.25 E-value=17 Score=26.42 Aligned_cols=20 Identities=30% Similarity=0.571 Sum_probs=17.4
Q ss_pred eEEecccccCCCeEeCCCCEEE
Q 023497 233 MLCVDSAAIENPIVLKPFEEWR 254 (281)
Q Consensus 233 ~vCvEp~~~~~~~~L~pge~~~ 254 (281)
|-|+++.+. +++|.+||.|.
T Consensus 76 F~tLp~nT~--lmvL~~ge~W~ 95 (100)
T 1f2r_I 76 FLCLPSNTK--FVALACNEKWT 95 (100)
T ss_dssp SSSSCSCCE--EEEECSSSCCS
T ss_pred hhcCCCCCE--EEEEcCCCccC
Confidence 888888776 89999999996
No 43
>1g43_A Scaffolding protein; beta-sandwich, structural protein; 2.20A {Clostridium cellulolyticum} SCOP: b.2.2.2
Probab=24.87 E-value=75 Score=24.82 Aligned_cols=32 Identities=16% Similarity=0.224 Sum_probs=27.0
Q ss_pred CeeEEEEEEEeCCCCceeee-ecCcceeecCCC
Q 023497 110 GKLTLIPRVRNVDNKAFSFM-FALRNYLSVSDI 141 (281)
Q Consensus 110 ~~L~~~l~v~N~g~~~~~f~-~g~HpYF~v~~~ 141 (281)
+.++..+.|+|++..+.... +-++-||..+..
T Consensus 20 n~i~~~~~I~N~g~~~i~Ls~l~iRYyft~d~~ 52 (160)
T 1g43_A 20 NSIYARFKVTNTSGSPINLADLKLRYYYTQDAD 52 (160)
T ss_dssp SCEEEEEEEEECSSSCEEGGGEEEEEEECCSSC
T ss_pred CEEEEEEEEEECCCCCcccCcEEEEEEEecCCC
Confidence 67999999999999888755 889999998754
No 44
>4b9f_A Cellulosomal-scaffolding protein A; sugar binding protein, cellulosome; 1.19A {Clostridium thermocellum atcc 27405} PDB: 1nbc_A
Probab=22.68 E-value=1.5e+02 Score=22.86 Aligned_cols=31 Identities=23% Similarity=0.370 Sum_probs=25.3
Q ss_pred CeeEEEEEEEeCCCCceeee-ecCcceeecCC
Q 023497 110 GKLTLIPRVRNVDNKAFSFM-FALRNYLSVSD 140 (281)
Q Consensus 110 ~~L~~~l~v~N~g~~~~~f~-~g~HpYF~v~~ 140 (281)
+.++..++|+|+|..|++++ +-+.-||..+.
T Consensus 16 n~i~p~~~i~N~g~~~i~LsdlkiRYyfT~d~ 47 (152)
T 4b9f_A 16 NSINPQFKVTNTGSSAIDLSKLTLRYYYTVDG 47 (152)
T ss_dssp SCBCEEEEEEECSSSCEEGGGEEEEEEECCSS
T ss_pred CEEeeEEEEEECCCCccccccEEEEEEEecCC
Confidence 57889999999999987664 67788888764
No 45
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=22.56 E-value=91 Score=27.60 Aligned_cols=19 Identities=11% Similarity=0.225 Sum_probs=16.1
Q ss_pred CeeEEEEEEEeCCCCceee
Q 023497 110 GKLTLIPRVRNVDNKAFSF 128 (281)
Q Consensus 110 ~~L~~~l~v~N~g~~~~~f 128 (281)
+.+.+..+|+|+|++++.+
T Consensus 36 ~~~~vk~tvtN~g~~~~~l 54 (343)
T 2x3c_A 36 DDVRVNLTLTNTGDKPIRL 54 (343)
T ss_dssp SCCEEEEEEEECSSSCEEE
T ss_pred CCeEEEEEEEeCCCCceEe
Confidence 4489999999999998755
No 46
>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A*
Probab=22.17 E-value=1e+02 Score=29.87 Aligned_cols=31 Identities=10% Similarity=-0.061 Sum_probs=25.9
Q ss_pred CcceEEEEEEEEeCCeeEEEEEEEeCCCCce
Q 023497 96 PRGFELRLRISISPGKLTLIPRVRNVDNKAF 126 (281)
Q Consensus 96 P~~f~l~~~~~L~~~~L~~~l~v~N~g~~~~ 126 (281)
++...++-+|+|..++|.+.++++|.++.++
T Consensus 540 ~~~~~l~K~~~~~~~~~~v~y~~~~~~~~~~ 570 (659)
T 1k1x_A 540 KIPARVEKKIELTEDGFIAKYRVLLEKPYKA 570 (659)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEESSCCCE
T ss_pred CcceEEEEEEEEcCCEEEEEEEEeeCCCCce
Confidence 4567888899999999999999999776433
No 47
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.16 E-value=1.8e+02 Score=20.28 Aligned_cols=23 Identities=9% Similarity=-0.064 Sum_probs=19.0
Q ss_pred eCCeeEEEEEEEeCCCCceeeee
Q 023497 108 SPGKLTLIPRVRNVDNKAFSFMF 130 (281)
Q Consensus 108 ~~~~L~~~l~v~N~g~~~~~f~~ 130 (281)
.+...+.+++++|+|+.|+.|.+
T Consensus 24 ~g~~~~~~~~l~N~g~~p~~~~~ 46 (112)
T 2e6j_A 24 TGSAHCYEAILYNKGSIDALFNM 46 (112)
T ss_dssp SSCCEEEEEEEEECCSSCEEEEE
T ss_pred ECCEEEEEEEEEECCcceEEEEE
Confidence 35567888999999999988876
No 48
>2x5c_A Hypothetical protein ORF131; viral protein; HET: GOL; 1.80A {Pyrobaculum spherical virus}
Probab=21.41 E-value=80 Score=22.43 Aligned_cols=26 Identities=23% Similarity=0.560 Sum_probs=21.2
Q ss_pred CeeEecCCCCCcEEEEECCCcceEEE
Q 023497 2 PLNIVHDKDGLPRIILTEPTGSSAES 27 (281)
Q Consensus 2 ~~~~~~~~~~l~~~~l~~~~g~~~~v 27 (281)
++.++...||...++|.||+|.+-.|
T Consensus 63 svsivetkngykylvirhpdggthtv 88 (131)
T 2x5c_A 63 SVSIVETKNGYKYLVIRHPDGGTHTV 88 (131)
T ss_dssp EEEEEECTTSCEEEEEECTTSCEEEC
T ss_pred ceEEEEecCCcEEEEEECCCCCcccc
Confidence 46778889999999999999876444
No 49
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=21.37 E-value=18 Score=24.22 Aligned_cols=15 Identities=33% Similarity=0.461 Sum_probs=12.3
Q ss_pred CCcCCcceEccccCC
Q 023497 34 AIRGGIPVCFPQFGN 48 (281)
Q Consensus 34 ~irgGiPv~fP~~G~ 48 (281)
|||.|||++.|-=.+
T Consensus 39 PI~dGIPvmL~~Ear 53 (67)
T 2jny_A 39 RIDDGIPVLLIDEAT 53 (67)
T ss_dssp EEETTEECCCSSCCE
T ss_pred cCCCCEeeeChhHhc
Confidence 699999999996544
Done!