BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023499
(281 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q949P3|Y2734_ARATH Uncharacterized protein At2g17340 OS=Arabidopsis thaliana
GN=At2g17340 PE=1 SV=1
Length = 367
Score = 501 bits (1291), Expect = e-141, Method: Compositional matrix adjust.
Identities = 243/281 (86%), Positives = 264/281 (93%)
Query: 1 MKKDPETHGGPPDCILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFGDVVRLNDVIE 60
+KKDPE+HGGPPD ILLCRLREQVLRELGFRDIFKKVKDEENAKAISLF VV L+D IE
Sbjct: 87 LKKDPESHGGPPDGILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFPQVVSLSDAIE 146
Query: 61 DEGKRVESLIRGIFAGNIFDLGSAQLAEVFSKDGMSFLASCQNLVPRPWVIDDLETFKVK 120
D+GKR+E+L+RGIFAGNIFDLGSAQLAEVFS+DGMSFLASCQNLVPRPWVIDDLE F+ K
Sbjct: 147 DDGKRLENLVRGIFAGNIFDLGSAQLAEVFSRDGMSFLASCQNLVPRPWVIDDLENFQAK 206
Query: 121 WSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIM 180
W K+WKKAVIFVDNSGADIILGILPFARELLRRG QV+LAAN+LPSIND+T EL EI+
Sbjct: 207 WINKSWKKAVIFVDNSGADIILGILPFARELLRRGAQVVLAANELPSINDITCTELTEIL 266
Query: 181 SKLKDEKGQLMGVDTSKLLIANSGNDLPVIDLTAVSQELAYLASDADLVILEGMGRGIET 240
S+LKDE GQL+GVDTSKLLIANSGNDLPVIDL+ VSQELAYL+SDADLVI+EGMGRGIET
Sbjct: 267 SQLKDENGQLLGVDTSKLLIANSGNDLPVIDLSRVSQELAYLSSDADLVIVEGMGRGIET 326
Query: 241 NLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFKYNEVSS 281
NLYAQFKCDSLKIGMVKH EVA+FLGGRLYDCVFK+NEV S
Sbjct: 327 NLYAQFKCDSLKIGMVKHLEVAEFLGGRLYDCVFKFNEVQS 367
>sp|Q5R5F8|PANK4_PONAB Pantothenate kinase 4 OS=Pongo abelii GN=PANK4 PE=2 SV=1
Length = 773
Score = 189 bits (481), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 158/260 (60%), Gaps = 5/260 (1%)
Query: 21 REQVLRELGFRDIFKKVKDEENAKAISLFGDVVRLNDVIEDEGKRVESLIRGIFAGNIFD 80
RE L E F D + KVK EN A+ F VVR D + E +++ +L++G+ AGN+FD
Sbjct: 510 REHCLNEFNFPDPYSKVKQRENGVALRCFPGVVRSLDALGWEERQL-ALVKGLLAGNVFD 568
Query: 81 LGSAQLAEVFSKDG-MSFLASCQNLVPRPWVIDDLETFKVKWSKKAWKKAVIFVDNSGAD 139
G+ +++V D F + + L RPW++D + + K A+IF DNSG D
Sbjct: 569 WGAKAVSDVLESDPCFGFEEAKRKLQERPWLVDSYSEWLQRLKGPPHKCALIFADNSGID 628
Query: 140 IILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQLM-GVDTSKL 198
IILG+ PF RELL RGT+VILA N P++NDVT+ E + + ++ + + +L
Sbjct: 629 IILGVFPFVRELLLRGTEVILACNSGPALNDVTHSESLIVAERIAGMDPVVHSALREERL 688
Query: 199 LIANSGNDLPVIDLTAVSQELAYLASD--ADLVILEGMGRGIETNLYAQFKCDSLKIGMV 256
L+ +G+ P +DL+ + + LA L + ADLV++EGMGR + TN +A +C+SLK+ ++
Sbjct: 689 LLVQTGSSSPCLDLSRLDKGLAALVRERGADLVVIEGMGRAVHTNYHAALRCESLKLAVI 748
Query: 257 KHPEVAQFLGGRLYDCVFKY 276
K+ +A+ LGGRL+ +FKY
Sbjct: 749 KNAWLAERLGGRLFSVIFKY 768
>sp|Q9NVE7|PANK4_HUMAN Pantothenate kinase 4 OS=Homo sapiens GN=PANK4 PE=1 SV=1
Length = 773
Score = 189 bits (480), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 157/260 (60%), Gaps = 5/260 (1%)
Query: 21 REQVLRELGFRDIFKKVKDEENAKAISLFGDVVRLNDVIEDEGKRVESLIRGIFAGNIFD 80
RE L E F D + KVK EN A+ F VVR D + E +++ +L++G+ AGN+FD
Sbjct: 510 REHCLNEFNFPDPYSKVKQRENGVALRCFPGVVRSLDALGWEERQL-ALVKGLLAGNVFD 568
Query: 81 LGSAQLAEVFSKDG-MSFLASCQNLVPRPWVIDDLETFKVKWSKKAWKKAVIFVDNSGAD 139
G+ ++ V D F + + L RPW++D + + K A+IF DNSG D
Sbjct: 569 WGAKAVSAVLESDPYFGFEEAKRKLQERPWLVDSYSEWLQRLKGPPHKCALIFADNSGID 628
Query: 140 IILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQLM-GVDTSKL 198
IILG+ PF RELL RGT+VILA N P++NDVT+ E + + ++ + + +L
Sbjct: 629 IILGVFPFVRELLLRGTEVILACNSGPALNDVTHSESLIVAERIAGMDPVVHSALQEERL 688
Query: 199 LIANSGNDLPVIDLTAVSQELAYLASD--ADLVILEGMGRGIETNLYAQFKCDSLKIGMV 256
L+ +G+ P +DL+ + + LA L + ADLV++EGMGR + TN +A +C+SLK+ ++
Sbjct: 689 LLVQTGSSSPCLDLSRLDKGLAALVRERGADLVVIEGMGRAVHTNYHAALRCESLKLAVI 748
Query: 257 KHPEVAQFLGGRLYDCVFKY 276
K+ +A+ LGGRL+ +FKY
Sbjct: 749 KNAWLAERLGGRLFSVIFKY 768
>sp|Q8L5Y9|PANK2_ARATH Pantothenate kinase 2 OS=Arabidopsis thaliana GN=At4g32180 PE=1
SV=2
Length = 901
Score = 189 bits (479), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 173/295 (58%), Gaps = 33/295 (11%)
Query: 17 LCRLREQVLRELGFRDIFKKVKDEENAKAISLFGDVVRLNDVIEDEGKRVESLIRGIFAG 76
L LRE+ LRE F D ++ +K EN ++++ D++ D + +E R+ +LI G+ A
Sbjct: 608 LLELREECLREFQFVDAYRSIKQRENEASLAVLPDLLEELDSMSEEA-RLLTLIEGVLAA 666
Query: 77 NIFDLGSAQLAEVFSKDGM-SFLASCQNLVPRPWVIDDLETFKVKW------SKKAWKKA 129
NIFD GS +++ K + +N + RPW +DD + FK + K+A
Sbjct: 667 NIFDWGSRACVDLYHKGTIIEIYRMSRNKMQRPWRVDDFDAFKERMLGSGGKQPHRHKRA 726
Query: 130 VIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMS-------- 181
++FVDNSGAD+ILG+LP ARE LRRGT+V+L AN LP++NDVT EL +I++
Sbjct: 727 LLFVDNSGADVILGMLPLAREFLRRGTEVVLVANSLPALNDVTAMELPDIVAGAAKHCDI 786
Query: 182 -KLKDEKGQLMGVD--------------TSKLLIANSGNDLPVIDLTAVSQELAYLASDA 226
+ E G L+ VD ++ L++ +G P IDL VS ELA A DA
Sbjct: 787 LRRAAEMGGLL-VDAMVNPGDGSKKDSTSAPLMVVENGCGSPCIDLRQVSSELAAAAKDA 845
Query: 227 DLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQ-FLGGRLYDCVFKYNEVS 280
DLV+LEGMGR + TN AQF+C++LK+ MVK+ +A+ + G +YDCV +Y S
Sbjct: 846 DLVVLEGMGRALHTNFNAQFQCEALKLAMVKNQRLAEKLIKGNIYDCVCRYEPPS 900
>sp|Q4R4U1|PANK4_MACFA Pantothenate kinase 4 OS=Macaca fascicularis GN=PANK4 PE=2 SV=2
Length = 773
Score = 187 bits (475), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 157/260 (60%), Gaps = 5/260 (1%)
Query: 21 REQVLRELGFRDIFKKVKDEENAKAISLFGDVVRLNDVIEDEGKRVESLIRGIFAGNIFD 80
RE L E F D + KVK EN A+ F VVR D + E +++ +L++G+ AGN+FD
Sbjct: 510 REHCLNEFNFPDPYSKVKQRENGVALRCFPGVVRSLDTLGWEERQL-ALVKGLLAGNVFD 568
Query: 81 LGSAQLAEVFSKDG-MSFLASCQNLVPRPWVIDDLETFKVKWSKKAWKKAVIFVDNSGAD 139
G+ +++V D F + + L RPW++D + + K A+IF DNSG D
Sbjct: 569 WGAKAVSDVLESDPYFGFEEAKRKLQERPWLVDSYSEWLQRLKGPPHKCALIFADNSGID 628
Query: 140 IILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQLM-GVDTSKL 198
IILG+ PF RELL RGT+VILA N P++NDVT+ E + + ++ + + +L
Sbjct: 629 IILGVFPFVRELLLRGTEVILACNSGPALNDVTHGESLIVAERIAGMDPVVHSALREERL 688
Query: 199 LIANSGNDLPVIDLTAVSQELAYLASD--ADLVILEGMGRGIETNLYAQFKCDSLKIGMV 256
L+ +G+ P +DL+ + + LA L + ADLV++EGMGR + TN +A C+SLK+ ++
Sbjct: 689 LLVQTGSSSPCLDLSRLDKGLAALVRERGADLVVIEGMGRAVHTNYHAALCCESLKLAVI 748
Query: 257 KHPEVAQFLGGRLYDCVFKY 276
K+ +A+ LGGRL+ +FKY
Sbjct: 749 KNAWLAERLGGRLFSVIFKY 768
>sp|Q923S8|PANK4_RAT Pantothenate kinase 4 OS=Rattus norvegicus GN=Pank4 PE=1 SV=1
Length = 773
Score = 186 bits (471), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/260 (38%), Positives = 157/260 (60%), Gaps = 5/260 (1%)
Query: 21 REQVLRELGFRDIFKKVKDEENAKAISLFGDVVRLNDVIEDEGKRVESLIRGIFAGNIFD 80
RE L E F D + KVK +EN A+ F V R D + E +++ +L++G+ AGN+FD
Sbjct: 510 REHCLNEFNFPDPYSKVKQKENGLALKCFQSVTRSLDSLGWEERQL-ALVKGLLAGNVFD 568
Query: 81 LGSAQLAEVFSKD-GMSFLASCQNLVPRPWVIDDLETFKVKWSKKAWKKAVIFVDNSGAD 139
G+ +++V D F + + L RPW++D + + K A+IF DNSG D
Sbjct: 569 WGAKAVSDVLESDPQFGFEEAKRKLQERPWLVDSYTKWLQRLKGPPHKCALIFADNSGID 628
Query: 140 IILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQL-MGVDTSKL 198
IILG+ PF RELL RG +VILA N P++NDVTY E + + ++ + + +L
Sbjct: 629 IILGVFPFVRELLCRGIEVILACNSGPALNDVTYSESLIVAERIAAMDPIICTALREDRL 688
Query: 199 LIANSGNDLPVIDLTAVSQELAYLASD--ADLVILEGMGRGIETNLYAQFKCDSLKIGMV 256
L+ +G+ P +DL+ + + LA L + ADLV++EGMGR + TN +A +C+SLK+ +V
Sbjct: 689 LLVQTGSSPPCLDLSRLDKGLAVLVRERGADLVVIEGMGRAVHTNYHALLRCESLKLAVV 748
Query: 257 KHPEVAQFLGGRLYDCVFKY 276
K+ +A+ LGG+L+ +FKY
Sbjct: 749 KNAWLAERLGGQLFSVIFKY 768
>sp|Q80YV4|PANK4_MOUSE Pantothenate kinase 4 OS=Mus musculus GN=Pank4 PE=1 SV=2
Length = 820
Score = 167 bits (424), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 157/307 (51%), Gaps = 52/307 (16%)
Query: 21 REQVLRELGFRDIFKKVKDEENAKAISLFGDVVRLNDVIEDEGKRVESLIRGIFAGNIFD 80
RE L E F D + KVK +EN A+ F V R D + E +++ +L++G+ AGN+FD
Sbjct: 510 REHCLNEFNFPDPYSKVKQKENGLALKCFQSVTRSLDSLGWEERQL-ALVKGLLAGNVFD 568
Query: 81 LGSAQLAEVFSKD-GMSFLASCQNLVPRPWVIDDLETFKVKWSKKAWKKAVIFVDNSGAD 139
G+ +++V D F + + L RPW++D + + K A+IF DNSG D
Sbjct: 569 WGAKAVSDVLESDPQFGFEEAKRKLQERPWLVDSYTKWLQRLKGPPHKCALIFADNSGID 628
Query: 140 IILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQL-MGVDTSKL 198
IILG+ PF RELL RGT+VILA N P++NDVTY E + + ++ + + +L
Sbjct: 629 IILGVFPFVRELLFRGTEVILACNSGPALNDVTYSESLIVAERIAAMDPIICTALREDRL 688
Query: 199 LIANSGNDLPVIDLTAVSQE---------------------------------------- 218
L+ +G+ P +DL+ +
Sbjct: 689 LLVQTGSSSPCLDLSLCTSRTTTCMVLPFAMWVLWTKLKSLVEKCLSPLSILLACSVLSA 748
Query: 219 -------LAYLASD--ADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRL 269
LA L + ADLV++EGMGR I TN +A +C+SLK+ +VK+ +A+ LGG+L
Sbjct: 749 KSRLDKGLAVLVRERGADLVVIEGMGRAIHTNYHALLRCESLKLAVVKNAWLAERLGGQL 808
Query: 270 YDCVFKY 276
+ +FKY
Sbjct: 809 FSVIFKY 815
>sp|Q57655|Y202_METJA Uncharacterized protein MJ0202 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0202 PE=4 SV=1
Length = 304
Score = 40.0 bits (92), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 84/204 (41%), Gaps = 23/204 (11%)
Query: 32 DIFKKVKDEENAKAISLFGDVVRLNDVIEDEGKRVESLIRGIFAGNIFDLGSAQLAEVFS 91
D +K +K++ N A+ + D VR +DE +R+ + AGN+ D G+
Sbjct: 81 DPYKNLKEKANKIALQ-YLDKVREMSNTDDELERLRKKVLATIAGNVIDFGAYST----- 134
Query: 92 KDGMSFLASCQNLVPRPWVIDDLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFAREL 151
G++ ++ + ID+ K KK + DN+G I +L E+
Sbjct: 135 --GINIEKLIEDTLNGELKIDNSRKLLNDLKDKNIKKILYICDNAGEIIFDRVL--MEEI 190
Query: 152 LRRGTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQLMGVDTSKLLIANSGNDLPVID 211
+ ++ P +ND T E ++ +D +I +G+D+ I
Sbjct: 191 KKYDKDIVAVVKGKPILNDATL------------EDAKIAKIDEIAKVIT-TGSDIIGII 237
Query: 212 LTAVSQELAYLASDADLVILEGMG 235
L S+E ADL+I +GMG
Sbjct: 238 LEECSEEFLKEFESADLIIAKGMG 261
>sp|A7GTV6|MURC_BACCN UDP-N-acetylmuramate--L-alanine ligase OS=Bacillus cereus subsp.
cytotoxis (strain NVH 391-98) GN=murC PE=3 SV=1
Length = 436
Score = 37.0 bits (84), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 14/127 (11%)
Query: 142 LGILPFARELLRRGTQVILAANDLPSIND--VTYPELIEIMSKLKDEKGQLMGVDTSKLL 199
+ ILPF + ++ G QVI+A N P ++ + EL + + G LM TS +
Sbjct: 48 ISILPFDKNNIKEG-QVIIAGNAFPDTHEEIMAAKELNIPVHRYHHFLGNLMSQYTSVAV 106
Query: 200 IANSGNDLPVIDLTAVSQELAYL---ASDADLVILEGMGRGIETNLYAQFK-CDSLKIGM 255
G T+ + LA++ A+ +I +G G G+E + Y F+ C+ + +
Sbjct: 107 TGAHGK-------TSTTGLLAHVMQGANPTSYLIGDGTGHGVENSKYFAFEACEYRRHFL 159
Query: 256 VKHPEVA 262
+P+ A
Sbjct: 160 SYYPDYA 166
>sp|Q3AFQ0|SECA_CARHZ Protein translocase subunit SecA OS=Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008) GN=secA PE=3
SV=1
Length = 874
Score = 36.6 bits (83), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 37/181 (20%)
Query: 9 GGPPDCILLCRLRE---------QVLRELGFRDIFKKVKDEENAKAISLFGDVVRLNDVI 59
GG P+ + L LR+ ++ REL + +KK+ DEE+ K + L G + +
Sbjct: 496 GGNPEFLALQELRKMGKTPEDDPELYRELLAK--YKKITDEEHKKVVELGG--LHIIGTE 551
Query: 60 EDEGKRVESLIRGIFAGNIFDLGSAQ--------LAEVFSKDGMSFLASCQNL-----VP 106
E +R+++ +RG AG D GS+Q L +F D ++ L L +
Sbjct: 552 RHESRRIDNQLRG-RAGRQGDPGSSQFFISLEDDLMRLFGSDNIAGLMDRLGLDEDTPIE 610
Query: 107 RPWVIDDLETFKVKWSKKAW--KKAVIFVDNSGADIILGILPFARELLRRGTQVILAAND 164
P + +ET + + + + +K V+ DN ++ REL+ + +L D
Sbjct: 611 HPLITRSIETAQKRVENRNFEIRKHVLEYDN--------VMNQQRELIYSQRRRVLFGED 662
Query: 165 L 165
+
Sbjct: 663 V 663
>sp|P04275|VWF_HUMAN von Willebrand factor OS=Homo sapiens GN=VWF PE=1 SV=4
Length = 2813
Score = 35.8 bits (81), Expect = 0.36, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 89 VFSKDGMSFLASCQNLVPRPWVIDDLETFKV--KWSKKAWKKAVIFVDNSGADIILGILP 146
VF DG S L+ + V + +V+D +E ++ KW + A V + D S A I L
Sbjct: 1279 VFLLDGSSRLSEAEFEVLKAFVVDMMERLRISQKWVRVA---VVEYHDGSHAYIGLKDRK 1335
Query: 147 FARELLRRGTQVILAANDLPSINDVTYPELIEIMSKL 183
EL R +QV A + + S ++V L +I SK+
Sbjct: 1336 RPSELRRIASQVKYAGSQVASTSEVLKYTLFQIFSKI 1372
>sp|Q9P7R0|ARO1_SCHPO Pentafunctional AROM polypeptide OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=aro1 PE=3 SV=1
Length = 1573
Score = 35.8 bits (81), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 8/54 (14%)
Query: 232 EGMGRGIETNLYAQ-FKCDSLKIGMVKHPEVAQFLG-------GRLYDCVFKYN 277
+G E LY Q + + IGMVK E+A++LG GRL C+ YN
Sbjct: 271 HSIGHAYEAILYPQILHGECVAIGMVKEAELARYLGILKPNAVGRLTKCLVSYN 324
>sp|B0BND0|ENPP6_RAT Ectonucleotide pyrophosphatase/phosphodiesterase family member 6
OS=Rattus norvegicus GN=Enpp6 PE=2 SV=1
Length = 440
Score = 35.4 bits (80), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 109 WVIDDLETFKVKWSKKAWKKA-VIFVDNSGADII----LGILPFARELLRRGTQVILAAN 163
W L F W A +K V+ +D +D I L LP RE++ RG +V
Sbjct: 6 WTFLLLFGFSWVWPASAHRKLLVLLLDGFRSDYISEDALASLPGFREIVNRGVKVDYLTP 65
Query: 164 DLPSINDVTYPELIEIMSKLKDEKGQLMG 192
D PS+ +YP +M+ E Q++G
Sbjct: 66 DFPSL---SYPNYYTLMTGRHCEVHQMIG 91
>sp|Q8BGN3|ENPP6_MOUSE Ectonucleotide pyrophosphatase/phosphodiesterase family member 6
OS=Mus musculus GN=Enpp6 PE=2 SV=1
Length = 440
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 121 WSKKAWKKA-VIFVDNSGADII----LGILPFARELLRRGTQVILAANDLPSINDVTYPE 175
W A +K V+ +D +D I L LP RE++ RG +V D PS+ +YP
Sbjct: 18 WPASAHRKLLVLLLDGFRSDYISEDALASLPGFREIVNRGVKVDYLTPDFPSL---SYPN 74
Query: 176 LIEIMSKLKDEKGQLMG 192
+M+ E Q++G
Sbjct: 75 YYTLMTGRHCEVHQMIG 91
>sp|O66442|ARGD_AQUAE Acetylornithine aminotransferase OS=Aquifex aeolicus (strain VF5)
GN=argD PE=1 SV=1
Length = 376
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 10/98 (10%)
Query: 58 VIEDEGKRVESLIRGIFAGNIFDLGSA--QLAEVFSKDGMSFLASCQNLVPRPWVIDDLE 115
+ ++EGK + GI + LG A +L E K+ + L NL PW E
Sbjct: 23 LYDEEGKEYLDFVSGI---GVNSLGHAYPKLTEAL-KEQVEKLLHVSNLYENPWQ----E 74
Query: 116 TFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLR 153
K K W + +F NSG + + + AR+ R
Sbjct: 75 ELAHKLVKHFWTEGKVFFANSGTESVEAAIKLARKYWR 112
>sp|Q72DW3|COBQ_DESVH Cobyric acid synthase OS=Desulfovibrio vulgaris (strain
Hildenborough / ATCC 29579 / NCIMB 8303) GN=cobQ PE=3
SV=1
Length = 543
Score = 32.3 bits (72), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 222 LASDADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGG 267
LA+D D+++LEG G E NL A D + + M +H E L G
Sbjct: 125 LAADVDVMVLEGAGSPAEVNLKAH---DIVNMAMARHAEAKVLLVG 167
>sp|B7VIK3|DNLJ_VIBSL DNA ligase OS=Vibrio splendidus (strain LGP32) GN=ligA PE=3 SV=1
Length = 670
Score = 32.0 bits (71), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 164 DLPSINDVTYPELIEIMSKLKDEKGQLMGVDTSKLLIANSGNDLPVIDLTAVSQELAYLA 223
D P I DV Y L++ + K++DE +L+ VD+ + P+ T V+ E+ L+
Sbjct: 27 DSPEIPDVEYDRLMQQLLKIEDENPELVTVDSPSQRVGGQ----PLDGFTQVTHEIPMLS 82
Query: 224 SD 225
D
Sbjct: 83 LD 84
>sp|A1VFG1|COBQ_DESVV Cobyric acid synthase OS=Desulfovibrio vulgaris subsp. vulgaris
(strain DP4) GN=cobQ PE=3 SV=1
Length = 539
Score = 32.0 bits (71), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 222 LASDADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGG 267
LA+D D+++LEG G E NL A D + + M +H E L G
Sbjct: 125 LAADVDVMVLEGAGSPAEVNLKAH---DIVNMAMARHAEAKVLLVG 167
>sp|Q8YUJ5|Y2351_NOSS1 UPF0758 protein alr2351 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=alr2351 PE=3 SV=1
Length = 243
Score = 32.0 bits (71), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 149 RELLRRGTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQLMGVDTSKLLIANSGNDLP 208
RE++R+G + A++ PS N PE IE+ +L QL+G+ LI +GN
Sbjct: 170 REIIRQGATRTIVAHNHPSGNVEPSPEDIELTRQLL-AGAQLLGIPLLDHLILGNGNHQS 228
Query: 209 VIDLTAV 215
+ ++T +
Sbjct: 229 LREITTL 235
>sp|Q2NEZ9|COBQ_METST Probable cobyric acid synthase OS=Methanosphaera stadtmanae (strain
DSM 3091) GN=cobQ PE=3 SV=1
Length = 502
Score = 32.0 bits (71), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 205 NDLPVIDLTAVSQELAYLASDADLVILEGMGRGIETNLY 243
N+ + A+ + L YL D D+ ++EG G E N+Y
Sbjct: 105 NNFRTQAIKAIEESLEYLKEDYDITVIEGAGSPAEINMY 143
>sp|Q3MGT8|Y172_ANAVT UPF0758 protein Ava_0172 OS=Anabaena variabilis (strain ATCC 29413
/ PCC 7937) GN=Ava_0172 PE=3 SV=1
Length = 243
Score = 31.6 bits (70), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 149 RELLRRGTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQLMGVDTSKLLIANSGNDLP 208
RE++R+G + A++ PS N PE IE+ +L QL+G+ LI +GN
Sbjct: 170 REIIRQGATRTIVAHNHPSGNVEPSPEDIELTRQLL-AGAQLLGIPLLDHLILGNGNHQS 228
Query: 209 VIDLTAV 215
+ ++T +
Sbjct: 229 LREVTTL 235
>sp|Q9KCI0|COBQ_BACHD Cobyric acid synthase OS=Bacillus halodurans (strain ATCC BAA-125 /
DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=cobQ PE=3
SV=1
Length = 501
Score = 31.6 bits (70), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 212 LTAVSQELAYLASDADLVILEGMGRGIETNL 242
L A+ Q LA L+ D+V++EG G +E NL
Sbjct: 112 LEAIKQALATLSQSFDMVVIEGAGSPVEVNL 142
>sp|P0CS10|TRM10_CRYNJ tRNA (guanine(9)-N1)-methyltransferase OS=Cryptococcus neoformans
var. neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=TRM10 PE=3 SV=1
Length = 429
Score = 31.6 bits (70), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 176 LIEIMSKLKDEKGQLMGVDTSKLLIANSGNDLPVIDLTAVSQELAYLASDAD 227
++ + S + E G+DT LL +G +PV DL A +L YL++DA+
Sbjct: 240 ILSVQSVVSKETQDKAGIDTKSLLSRLTGPQVPV-DLQAGKHKLVYLSADAE 290
>sp|P0CS11|TRM10_CRYNB tRNA (guanine(9)-N1)-methyltransferase OS=Cryptococcus neoformans
var. neoformans serotype D (strain B-3501A) GN=TRM10
PE=3 SV=1
Length = 429
Score = 31.6 bits (70), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 176 LIEIMSKLKDEKGQLMGVDTSKLLIANSGNDLPVIDLTAVSQELAYLASDAD 227
++ + S + E G+DT LL +G +PV DL A +L YL++DA+
Sbjct: 240 ILSVQSVVSKETQDKAGIDTKSLLSRLTGPQVPV-DLQAGKHKLVYLSADAE 290
>sp|Q9LYA9|CP41A_ARATH Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic
OS=Arabidopsis thaliana GN=CSP41A PE=1 SV=1
Length = 406
Score = 31.2 bits (69), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 16/117 (13%)
Query: 115 ETFKVKWSKKAWKKAVIFVD-NSGADIILGILPFARELLRRGTQV-ILAANDLPS--IND 170
+ F VK S KK V+ V+ NSG ++G FA+ELL G V IL D S +
Sbjct: 67 QKFTVKASSVGEKKNVLIVNTNSGGHAVIGFY-FAKELLSAGHAVTILTVGDESSEKMKK 125
Query: 171 VTYPELIEIMS-------KLKDEKGQLMGVDTSKLLIANSGNDL----PVIDLTAVS 216
+ EI+S ++G +T +++ N+G DL PV+D S
Sbjct: 126 PPFNRFSEIVSGGGKTVWGNPANVANVVGGETFDVVLDNNGKDLDTVRPVVDWAKSS 182
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.140 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,626,982
Number of Sequences: 539616
Number of extensions: 4400940
Number of successful extensions: 12658
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 12618
Number of HSP's gapped (non-prelim): 53
length of query: 281
length of database: 191,569,459
effective HSP length: 116
effective length of query: 165
effective length of database: 128,974,003
effective search space: 21280710495
effective search space used: 21280710495
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)