Query 023500
Match_columns 281
No_of_seqs 141 out of 1305
Neff 11.1
Searched_HMMs 29240
Date Mon Mar 25 07:53:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023500.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023500hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fm0_A Protein CIAO1; WDR39,SG 100.0 8.6E-45 2.9E-49 299.4 36.6 272 2-280 60-336 (345)
2 2ynn_A Coatomer subunit beta'; 100.0 2.3E-42 7.9E-47 280.1 33.6 244 2-279 12-259 (304)
3 2hes_X YDR267CP; beta-propelle 100.0 4.1E-42 1.4E-46 281.8 33.6 263 2-280 57-329 (330)
4 4gqb_B Methylosome protein 50; 100.0 3.1E-41 1.1E-45 277.7 34.2 244 3-279 82-331 (344)
5 2pm7_B Protein transport prote 100.0 8.8E-41 3E-45 269.9 34.5 256 2-278 8-284 (297)
6 1vyh_C Platelet-activating fac 100.0 6.9E-41 2.4E-45 282.3 34.1 242 2-279 107-369 (410)
7 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.4E-40 1.5E-44 271.3 35.8 260 2-279 14-283 (345)
8 3ow8_A WD repeat-containing pr 100.0 9.4E-40 3.2E-44 266.7 34.9 244 2-279 31-279 (321)
9 2hes_X YDR267CP; beta-propelle 100.0 1.2E-39 4.2E-44 267.1 35.3 258 2-279 13-280 (330)
10 1vyh_C Platelet-activating fac 100.0 3.2E-40 1.1E-44 278.3 32.6 241 2-278 149-410 (410)
11 3bg1_A Protein SEC13 homolog; 100.0 8.1E-41 2.8E-45 272.5 26.5 255 2-278 12-292 (316)
12 1got_B GT-beta; complex (GTP-b 100.0 2E-39 6.8E-44 266.9 34.5 243 2-276 54-340 (340)
13 3ow8_A WD repeat-containing pr 100.0 2.2E-39 7.6E-44 264.5 33.5 241 2-278 79-320 (321)
14 2pbi_B Guanine nucleotide-bind 100.0 4.9E-39 1.7E-43 265.9 33.9 242 2-276 63-354 (354)
15 3frx_A Guanine nucleotide-bind 100.0 2.7E-39 9.2E-44 263.8 30.9 248 2-279 64-317 (319)
16 4g56_B MGC81050 protein; prote 100.0 7.3E-39 2.5E-43 265.2 31.4 245 2-279 93-343 (357)
17 2xzm_R RACK1; ribosome, transl 100.0 8.1E-39 2.8E-43 263.5 31.0 252 2-279 75-340 (343)
18 4gqb_B Methylosome protein 50; 100.0 4.2E-39 1.4E-43 265.1 28.8 248 2-279 29-289 (344)
19 4aow_A Guanine nucleotide-bind 100.0 1.8E-38 6.1E-43 260.3 32.4 255 2-279 37-337 (340)
20 3iz6_a 40S ribosomal protein R 100.0 2.2E-38 7.5E-43 264.5 31.9 257 2-279 65-375 (380)
21 4g56_B MGC81050 protein; prote 100.0 5.1E-39 1.7E-43 266.1 27.6 249 2-279 41-301 (357)
22 1erj_A Transcriptional repress 100.0 9.3E-38 3.2E-42 261.8 34.4 254 5-279 125-389 (393)
23 4ery_A WD repeat-containing pr 100.0 2.3E-37 7.9E-42 251.4 35.0 245 2-280 22-269 (312)
24 2ynn_A Coatomer subunit beta'; 100.0 1.9E-37 6.6E-42 251.2 33.5 244 2-279 54-302 (304)
25 2xzm_R RACK1; ribosome, transl 100.0 2.3E-37 7.9E-42 254.8 34.2 244 2-279 20-285 (343)
26 1nr0_A Actin interacting prote 100.0 3E-38 1E-42 278.9 30.5 258 2-279 58-355 (611)
27 3jrp_A Fusion protein of prote 100.0 5.8E-37 2E-41 254.7 34.4 256 2-278 10-286 (379)
28 3f3f_A Nucleoporin SEH1; struc 100.0 3.5E-36 1.2E-40 246.6 36.2 267 2-279 10-337 (351)
29 3frx_A Guanine nucleotide-bind 100.0 1.8E-36 6.3E-41 247.0 33.5 241 2-279 16-267 (319)
30 1nr0_A Actin interacting prote 100.0 1.7E-36 5.9E-41 267.7 35.1 260 2-279 146-479 (611)
31 4e54_B DNA damage-binding prot 100.0 3.1E-37 1.1E-41 261.9 28.6 257 2-280 118-431 (435)
32 4ery_A WD repeat-containing pr 100.0 5.3E-36 1.8E-40 243.4 34.5 242 2-278 64-311 (312)
33 1erj_A Transcriptional repress 100.0 3.3E-36 1.1E-40 252.4 33.8 256 2-279 63-341 (393)
34 3dm0_A Maltose-binding peripla 100.0 9E-37 3.1E-41 273.3 32.1 253 2-279 429-693 (694)
35 3dwl_C Actin-related protein 2 100.0 1.8E-37 6.1E-42 258.3 24.1 263 2-278 10-280 (377)
36 1k8k_C P40, ARP2/3 complex 41 100.0 5.6E-36 1.9E-40 248.4 32.9 262 2-279 51-361 (372)
37 2ymu_A WD-40 repeat protein; u 100.0 3.3E-36 1.1E-40 263.9 32.9 234 2-276 343-577 (577)
38 3dwl_C Actin-related protein 2 100.0 2.5E-37 8.6E-42 257.4 24.2 267 2-277 54-377 (377)
39 1k8k_C P40, ARP2/3 complex 41 100.0 1.6E-35 5.4E-40 245.7 33.9 261 1-279 6-274 (372)
40 3vl1_A 26S proteasome regulato 100.0 6.5E-35 2.2E-39 246.1 33.2 255 2-280 138-420 (420)
41 3ei3_B DNA damage-binding prot 100.0 8.1E-35 2.8E-39 242.9 32.9 257 2-280 72-383 (383)
42 3dm0_A Maltose-binding peripla 100.0 6.7E-35 2.3E-39 261.2 34.4 245 2-279 381-632 (694)
43 2pm9_A Protein WEB1, protein t 100.0 1.5E-35 5E-40 249.5 27.3 255 2-280 66-338 (416)
44 2ymu_A WD-40 repeat protein; u 100.0 1.3E-34 4.5E-39 253.7 34.1 236 2-278 302-538 (577)
45 2xyi_A Probable histone-bindin 100.0 3.2E-35 1.1E-39 249.2 28.7 261 2-279 127-410 (430)
46 3k26_A Polycomb protein EED; W 100.0 2.3E-35 7.9E-40 243.9 26.4 263 2-278 68-365 (366)
47 3jro_A Fusion protein of prote 100.0 5.4E-35 1.9E-39 263.7 31.1 257 2-279 8-285 (753)
48 1gxr_A ESG1, transducin-like e 100.0 7.1E-34 2.4E-38 232.4 34.8 240 2-278 96-336 (337)
49 3odt_A Protein DOA1; ubiquitin 100.0 2.5E-34 8.5E-39 232.9 31.1 238 2-279 17-255 (313)
50 3zwl_B Eukaryotic translation 100.0 5E-34 1.7E-38 236.0 33.5 260 2-279 31-346 (369)
51 1gxr_A ESG1, transducin-like e 100.0 5.9E-34 2E-38 232.9 33.3 243 2-279 50-296 (337)
52 4ggc_A P55CDC, cell division c 100.0 6.9E-34 2.4E-38 230.9 32.1 244 6-279 28-315 (318)
53 4h5i_A Guanine nucleotide-exch 100.0 2.9E-34 1E-38 238.2 30.1 203 48-279 134-343 (365)
54 4gga_A P55CDC, cell division c 100.0 7.2E-34 2.5E-38 240.2 32.8 244 2-279 146-395 (420)
55 2j04_B YDR362CP, TAU91; beta p 100.0 6.8E-35 2.3E-39 251.7 26.9 255 2-280 206-518 (524)
56 3dw8_B Serine/threonine-protei 100.0 2.1E-34 7.2E-39 244.8 28.3 255 2-279 27-373 (447)
57 3i2n_A WD repeat-containing pr 100.0 3.5E-34 1.2E-38 236.2 28.6 259 2-280 64-354 (357)
58 3mkq_A Coatomer beta'-subunit; 100.0 4.7E-34 1.6E-38 259.6 31.8 244 2-279 12-259 (814)
59 3i2n_A WD repeat-containing pr 100.0 4E-34 1.4E-38 235.8 28.6 254 2-279 17-291 (357)
60 2pm9_A Protein WEB1, protein t 100.0 5.8E-35 2E-39 245.9 23.7 255 4-279 13-294 (416)
61 1r5m_A SIR4-interacting protei 100.0 1.5E-33 5E-38 237.5 31.4 252 2-279 44-361 (425)
62 4aez_A CDC20, WD repeat-contai 100.0 3.3E-33 1.1E-37 234.7 33.2 242 2-279 133-380 (401)
63 2j04_B YDR362CP, TAU91; beta p 100.0 3.4E-35 1.2E-39 253.5 21.3 233 17-279 175-428 (524)
64 3vl1_A 26S proteasome regulato 100.0 4.3E-33 1.5E-37 235.0 32.7 243 6-279 100-365 (420)
65 3gre_A Serine/threonine-protei 100.0 7E-34 2.4E-38 241.2 27.5 257 2-279 62-359 (437)
66 1yfq_A Cell cycle arrest prote 100.0 1.4E-33 4.6E-38 231.5 28.3 255 2-279 10-282 (342)
67 4a11_B DNA excision repair pro 100.0 9.8E-33 3.4E-37 231.3 33.7 264 2-279 42-365 (408)
68 1sq9_A Antiviral protein SKI8; 100.0 2.5E-33 8.4E-38 234.6 29.0 254 2-279 15-322 (397)
69 2pm7_B Protein transport prote 100.0 3.4E-33 1.2E-37 225.4 28.1 216 41-279 3-238 (297)
70 1r5m_A SIR4-interacting protei 100.0 9.5E-33 3.2E-37 232.5 31.9 251 2-278 107-424 (425)
71 3sfz_A APAF-1, apoptotic pepti 100.0 7.3E-33 2.5E-37 262.2 34.3 253 2-278 614-912 (1249)
72 3k26_A Polycomb protein EED; W 100.0 1.3E-32 4.5E-37 227.3 30.9 267 2-279 17-318 (366)
73 2aq5_A Coronin-1A; WD40 repeat 100.0 6.9E-33 2.4E-37 232.8 29.6 248 2-279 80-342 (402)
74 1sq9_A Antiviral protein SKI8; 100.0 5.8E-33 2E-37 232.4 28.7 251 2-279 61-395 (397)
75 3odt_A Protein DOA1; ubiquitin 100.0 2.6E-32 8.9E-37 221.0 30.9 237 2-279 58-296 (313)
76 3mmy_A MRNA export factor; mRN 100.0 7.5E-33 2.6E-37 228.8 28.2 254 2-277 38-344 (368)
77 2aq5_A Coronin-1A; WD40 repeat 100.0 2.1E-32 7E-37 229.9 28.5 249 6-279 37-299 (402)
78 2j04_A TAU60, YPL007P, hypothe 100.0 2.3E-32 8E-37 232.3 27.4 245 3-278 15-296 (588)
79 3gre_A Serine/threonine-protei 100.0 3.8E-32 1.3E-36 230.5 26.6 264 2-276 110-437 (437)
80 3v7d_B Cell division control p 100.0 3.6E-31 1.2E-35 226.2 32.6 240 2-280 161-422 (464)
81 1got_B GT-beta; complex (GTP-b 100.0 1.6E-31 5.4E-36 219.8 28.7 198 2-224 142-340 (340)
82 3v7d_B Cell division control p 100.0 6.9E-31 2.4E-35 224.4 33.5 245 2-280 120-382 (464)
83 3bg1_A Protein SEC13 homolog; 100.0 2.3E-32 7.9E-37 222.5 22.9 211 2-226 56-292 (316)
84 1p22_A F-BOX/WD-repeat protein 100.0 4E-31 1.4E-35 224.4 31.3 243 2-279 172-414 (435)
85 2pbi_B Guanine nucleotide-bind 100.0 4.8E-31 1.6E-35 218.0 29.5 198 2-223 153-353 (354)
86 4h5i_A Guanine nucleotide-exch 100.0 1.9E-31 6.4E-36 221.3 27.1 204 3-227 133-343 (365)
87 4gq1_A NUP37; propeller, trans 100.0 2.6E-32 8.9E-37 228.7 22.0 254 10-277 96-387 (393)
88 1pgu_A Actin interacting prote 100.0 1E-30 3.5E-35 230.3 31.9 243 2-279 17-283 (615)
89 3mkq_A Coatomer beta'-subunit; 100.0 9.6E-31 3.3E-35 237.9 31.7 245 2-279 54-302 (814)
90 3iz6_a 40S ribosomal protein R 100.0 1.4E-31 4.7E-36 223.4 24.0 230 27-279 48-280 (380)
91 4aow_A Guanine nucleotide-bind 100.0 2.1E-30 7.1E-35 212.3 30.5 231 19-279 8-246 (340)
92 1p22_A F-BOX/WD-repeat protein 100.0 3E-30 1E-34 218.9 31.9 234 2-279 132-365 (435)
93 4aez_A CDC20, WD repeat-contai 100.0 2.9E-30 9.9E-35 216.8 30.6 236 6-279 96-336 (401)
94 2oaj_A Protein SNI1; WD40 repe 100.0 3.9E-31 1.3E-35 242.2 26.1 253 2-279 434-783 (902)
95 3sfz_A APAF-1, apoptotic pepti 100.0 2.5E-30 8.6E-35 244.9 32.3 260 2-279 656-1034(1249)
96 2oaj_A Protein SNI1; WD40 repe 100.0 1E-30 3.5E-35 239.4 28.4 262 2-277 16-310 (902)
97 4e54_B DNA damage-binding prot 100.0 4.9E-31 1.7E-35 223.8 23.2 211 41-279 113-327 (435)
98 2vdu_B TRNA (guanine-N(7)-)-me 100.0 8.2E-30 2.8E-34 217.2 30.5 261 2-279 101-391 (450)
99 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.4E-29 4.8E-34 215.8 31.7 250 3-277 4-337 (450)
100 3jrp_A Fusion protein of prote 100.0 5.1E-30 1.7E-34 212.8 28.2 218 39-279 3-240 (379)
101 4gga_A P55CDC, cell division c 100.0 5.2E-29 1.8E-33 210.4 34.6 242 5-279 107-353 (420)
102 3dw8_B Serine/threonine-protei 100.0 3.8E-30 1.3E-34 218.6 27.5 251 4-277 94-444 (447)
103 1pgu_A Actin interacting prote 100.0 5.3E-30 1.8E-34 225.8 29.0 246 2-279 62-328 (615)
104 1yfq_A Cell cycle arrest prote 100.0 2.1E-29 7.1E-34 206.6 27.7 239 2-271 55-315 (342)
105 3f3f_A Nucleoporin SEH1; struc 100.0 2.6E-29 8.8E-34 205.7 27.9 227 42-279 6-249 (351)
106 3lrv_A PRE-mRNA-splicing facto 100.0 3.2E-30 1.1E-34 212.2 22.2 236 11-279 44-292 (343)
107 2j04_A TAU60, YPL007P, hypothe 100.0 5.9E-30 2E-34 217.6 24.0 236 2-268 84-350 (588)
108 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.2E-28 7.7E-33 207.9 33.0 235 2-280 158-392 (445)
109 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.3E-28 1.1E-32 206.9 33.1 232 2-279 117-348 (445)
110 3vu4_A KMHSV2; beta-propeller 100.0 1.9E-28 6.4E-33 202.6 30.4 257 2-279 18-336 (355)
111 2xyi_A Probable histone-bindin 100.0 8.6E-29 2.9E-33 209.7 27.9 220 41-279 122-353 (430)
112 3ei3_B DNA damage-binding prot 100.0 1.6E-28 5.3E-33 204.8 28.7 214 38-279 64-282 (383)
113 3zwl_B Eukaryotic translation 100.0 1.2E-27 4.1E-32 197.7 29.2 221 36-279 21-249 (369)
114 4a11_B DNA excision repair pro 100.0 1.6E-27 5.3E-32 199.7 29.8 258 2-278 98-404 (408)
115 3jro_A Fusion protein of prote 100.0 2.5E-28 8.5E-33 220.3 26.2 216 41-279 3-238 (753)
116 2w18_A PALB2, fancn, partner a 100.0 1.1E-27 3.8E-32 192.1 25.2 234 18-278 57-356 (356)
117 3mmy_A MRNA export factor; mRN 100.0 6.8E-27 2.3E-31 193.0 24.0 224 38-279 30-304 (368)
118 1l0q_A Surface layer protein; 100.0 3.1E-25 1.1E-29 185.2 33.2 236 4-279 32-275 (391)
119 3lrv_A PRE-mRNA-splicing facto 100.0 5.9E-26 2E-30 186.6 27.3 236 4-276 77-330 (343)
120 3bws_A Protein LP49; two-domai 100.0 5.1E-25 1.8E-29 186.3 32.5 239 2-279 168-432 (433)
121 4ggc_A P55CDC, cell division c 99.9 1.9E-25 6.5E-30 181.0 26.4 203 2-226 66-314 (318)
122 3bws_A Protein LP49; two-domai 99.9 5.2E-25 1.8E-29 186.3 29.2 240 4-279 123-390 (433)
123 2w18_A PALB2, fancn, partner a 99.9 1.3E-25 4.5E-30 180.1 23.0 201 2-225 110-355 (356)
124 4gq1_A NUP37; propeller, trans 99.9 3.4E-26 1.2E-30 191.6 18.8 207 2-223 135-385 (393)
125 1l0q_A Surface layer protein; 99.9 4.8E-23 1.6E-27 171.9 31.1 224 16-279 3-233 (391)
126 2oit_A Nucleoporin 214KDA; NH2 99.9 1.7E-23 5.9E-28 177.1 26.3 208 3-227 36-278 (434)
127 3vu4_A KMHSV2; beta-propeller 99.9 3.6E-23 1.2E-27 170.8 27.4 212 5-227 60-336 (355)
128 1ri6_A Putative isomerase YBHE 99.9 4.8E-22 1.6E-26 162.6 33.6 260 2-278 36-307 (343)
129 3hfq_A Uncharacterized protein 99.9 1.3E-21 4.3E-26 160.9 31.0 257 4-278 40-316 (347)
130 2hqs_A Protein TOLB; TOLB, PAL 99.9 8.7E-22 3E-26 165.9 28.4 217 2-259 177-409 (415)
131 2hqs_A Protein TOLB; TOLB, PAL 99.9 4.6E-21 1.6E-25 161.5 29.1 223 15-279 143-387 (415)
132 2oit_A Nucleoporin 214KDA; NH2 99.9 1.6E-21 5.5E-26 165.0 26.2 163 3-174 92-278 (434)
133 2ojh_A Uncharacterized protein 99.9 2.9E-21 9.8E-26 154.4 23.7 237 2-270 40-294 (297)
134 1ri6_A Putative isomerase YBHE 99.9 2E-20 6.9E-25 152.9 27.3 241 17-278 7-261 (343)
135 3u4y_A Uncharacterized protein 99.9 2.5E-20 8.6E-25 151.9 27.0 253 4-280 41-305 (331)
136 2ecf_A Dipeptidyl peptidase IV 99.9 4.9E-21 1.7E-25 172.6 24.9 245 4-278 37-366 (741)
137 1nir_A Nitrite reductase; hemo 99.9 1.9E-19 6.6E-24 156.3 27.9 255 6-279 181-514 (543)
138 2ecf_A Dipeptidyl peptidase IV 99.9 8.3E-20 2.8E-24 164.6 26.1 241 5-278 110-412 (741)
139 3scy_A Hypothetical bacterial 99.9 3.6E-18 1.2E-22 141.0 32.5 258 4-278 50-336 (361)
140 1xfd_A DIP, dipeptidyl aminope 99.9 2.1E-20 7.2E-25 168.0 20.5 247 5-276 18-341 (723)
141 2z3z_A Dipeptidyl aminopeptida 99.9 2.8E-19 9.5E-24 160.3 27.5 243 4-278 82-390 (706)
142 2ojh_A Uncharacterized protein 99.9 2E-19 6.9E-24 143.6 23.9 224 20-279 17-258 (297)
143 1nir_A Nitrite reductase; hemo 99.9 6.8E-19 2.3E-23 152.9 27.9 240 10-279 144-402 (543)
144 1xfd_A DIP, dipeptidyl aminope 99.9 2.8E-19 9.4E-24 160.7 24.8 248 5-278 62-392 (723)
145 2z3z_A Dipeptidyl aminopeptida 99.8 4.4E-19 1.5E-23 159.1 25.6 248 3-279 120-435 (706)
146 3u4y_A Uncharacterized protein 99.8 8.6E-18 2.9E-22 136.9 29.6 241 9-279 3-252 (331)
147 3vgz_A Uncharacterized protein 99.8 1.1E-17 3.6E-22 137.4 29.3 239 4-279 41-303 (353)
148 3o4h_A Acylamino-acid-releasin 99.8 4.5E-19 1.5E-23 155.7 20.1 230 3-277 21-274 (582)
149 1jof_A Carboxy-CIS,CIS-muconat 99.8 2.1E-17 7.1E-22 136.8 28.2 258 5-279 41-341 (365)
150 3hfq_A Uncharacterized protein 99.8 4.9E-17 1.7E-21 133.5 29.6 238 23-278 14-270 (347)
151 1jmx_B Amine dehydrogenase; ox 99.8 2.4E-17 8.3E-22 134.9 25.7 244 8-279 4-325 (349)
152 1k32_A Tricorn protease; prote 99.8 6.2E-18 2.1E-22 157.8 23.4 190 3-223 295-498 (1045)
153 1z68_A Fibroblast activation p 99.8 2.7E-18 9.2E-23 154.3 19.8 245 8-278 20-345 (719)
154 1k32_A Tricorn protease; prote 99.8 3.8E-17 1.3E-21 152.5 27.5 242 5-279 339-637 (1045)
155 3vgz_A Uncharacterized protein 99.8 4.7E-16 1.6E-20 127.5 30.8 230 5-268 90-334 (353)
156 1pby_B Quinohemoprotein amine 99.8 2.6E-16 8.9E-21 128.1 26.9 237 16-279 2-310 (337)
157 3scy_A Hypothetical bacterial 99.8 3.6E-15 1.2E-19 123.0 32.2 257 13-278 11-290 (361)
158 4a5s_A Dipeptidyl peptidase 4 99.8 3.3E-17 1.1E-21 147.7 18.6 155 5-171 18-199 (740)
159 1z68_A Fibroblast activation p 99.8 4.4E-17 1.5E-21 146.4 18.4 249 5-279 61-391 (719)
160 3fvz_A Peptidyl-glycine alpha- 99.7 3.1E-14 1E-18 116.1 32.4 248 4-279 24-322 (329)
161 1q7f_A NHL, brain tumor CG1071 99.7 4E-14 1.4E-18 112.9 31.9 239 4-279 30-280 (286)
162 1jof_A Carboxy-CIS,CIS-muconat 99.7 6E-14 2E-18 116.0 28.7 242 18-278 5-290 (365)
163 3pe7_A Oligogalacturonate lyas 99.7 1.6E-14 5.5E-19 120.1 23.5 239 6-278 83-381 (388)
164 3o4h_A Acylamino-acid-releasin 99.7 9.8E-15 3.4E-19 128.1 20.6 223 4-277 65-313 (582)
165 3azo_A Aminopeptidase; POP fam 99.7 4.5E-14 1.6E-18 125.6 24.7 250 2-277 22-321 (662)
166 2bkl_A Prolyl endopeptidase; m 99.6 4.3E-14 1.5E-18 126.5 23.7 247 4-279 121-397 (695)
167 1pby_B Quinohemoprotein amine 99.6 5.2E-14 1.8E-18 114.4 22.2 202 5-227 35-310 (337)
168 3e5z_A Putative gluconolactona 99.6 6.7E-13 2.3E-17 106.4 27.3 231 5-272 29-280 (296)
169 2xdw_A Prolyl endopeptidase; a 99.6 5.8E-13 2E-17 119.6 29.8 247 5-279 126-414 (710)
170 1jmx_B Amine dehydrogenase; ox 99.6 6.1E-14 2.1E-18 114.6 21.4 197 5-227 44-325 (349)
171 3azo_A Aminopeptidase; POP fam 99.6 9.1E-14 3.1E-18 123.7 22.9 158 2-172 128-321 (662)
172 3pe7_A Oligogalacturonate lyas 99.6 1.2E-13 4E-18 114.8 21.8 237 9-279 41-329 (388)
173 2gop_A Trilobed protease; beta 99.6 5.9E-13 2E-17 109.0 24.7 221 5-277 60-329 (347)
174 4a5s_A Dipeptidyl peptidase 4 99.6 2.1E-13 7E-18 123.0 22.0 160 8-176 66-296 (740)
175 1rwi_B Serine/threonine-protei 99.6 4.6E-12 1.6E-16 99.9 27.0 238 5-280 25-265 (270)
176 2dg1_A DRP35, lactonase; beta 99.6 2.7E-11 9.3E-16 98.5 31.1 241 4-268 45-300 (333)
177 2dg1_A DRP35, lactonase; beta 99.6 1.4E-12 4.9E-17 106.1 22.9 246 3-278 5-262 (333)
178 1q7f_A NHL, brain tumor CG1071 99.5 2.7E-11 9.3E-16 96.4 27.9 198 4-226 77-279 (286)
179 3c5m_A Oligogalacturonate lyas 99.5 6.5E-13 2.2E-17 110.5 17.7 231 9-278 86-381 (396)
180 3c5m_A Oligogalacturonate lyas 99.5 7.4E-13 2.5E-17 110.1 16.8 234 6-279 38-329 (396)
181 1yr2_A Prolyl oligopeptidase; 99.5 2.2E-11 7.4E-16 109.9 25.7 246 5-279 164-441 (741)
182 2gop_A Trilobed protease; beta 99.5 3.7E-11 1.3E-15 98.2 24.6 218 4-278 15-290 (347)
183 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 1.3E-10 4.6E-15 93.4 27.3 245 5-279 19-299 (314)
184 2z2n_A Virginiamycin B lyase; 99.5 2.2E-09 7.4E-14 85.5 33.5 238 4-277 15-253 (299)
185 2bkl_A Prolyl endopeptidase; m 99.4 7.1E-11 2.4E-15 105.8 25.9 236 12-278 76-348 (695)
186 1xip_A Nucleoporin NUP159; bet 99.4 8.3E-12 2.8E-16 102.9 18.0 173 5-212 39-228 (388)
187 2oiz_A Aromatic amine dehydrog 99.4 2.9E-10 9.8E-15 93.8 27.1 145 14-173 14-181 (361)
188 3fvz_A Peptidyl-glycine alpha- 99.4 1.7E-10 5.8E-15 93.9 24.4 200 4-226 91-321 (329)
189 3no2_A Uncharacterized protein 99.4 1.7E-09 5.9E-14 85.6 28.7 185 14-226 4-194 (276)
190 2z2n_A Virginiamycin B lyase; 99.4 1.5E-08 5.2E-13 80.6 33.2 237 4-278 57-294 (299)
191 3hrp_A Uncharacterized protein 99.4 4.2E-09 1.4E-13 88.2 30.9 256 5-277 132-408 (409)
192 3dsm_A Uncharacterized protein 99.4 1.3E-09 4.4E-14 88.6 26.7 238 6-278 46-301 (328)
193 2xdw_A Prolyl endopeptidase; a 99.4 4.1E-10 1.4E-14 101.0 25.3 242 13-277 81-366 (710)
194 2qc5_A Streptogramin B lactona 99.4 2.5E-08 8.6E-13 79.3 33.2 238 4-277 20-258 (300)
195 2oiz_A Aromatic amine dehydrog 99.3 7.4E-10 2.5E-14 91.3 23.4 224 8-260 54-360 (361)
196 3g4e_A Regucalcin; six bladed 99.3 7.5E-09 2.6E-13 82.8 28.7 231 7-269 16-263 (297)
197 3dr2_A Exported gluconolactona 99.3 3.3E-09 1.1E-13 85.2 26.2 230 6-273 47-301 (305)
198 3e5z_A Putative gluconolactona 99.3 8.1E-10 2.8E-14 88.3 22.3 160 3-173 68-245 (296)
199 1xip_A Nucleoporin NUP159; bet 99.3 4E-11 1.4E-15 98.9 14.8 140 6-161 90-231 (388)
200 1rwi_B Serine/threonine-protei 99.3 2.6E-09 8.9E-14 83.9 23.6 194 4-225 67-262 (270)
201 2qc5_A Streptogramin B lactona 99.3 1.4E-07 4.7E-12 75.0 31.8 236 4-277 62-298 (300)
202 1qks_A Cytochrome CD1 nitrite 99.2 3.8E-08 1.3E-12 85.6 30.0 238 13-279 165-421 (567)
203 2ghs_A AGR_C_1268P; regucalcin 99.2 4.6E-08 1.6E-12 79.3 28.7 230 7-270 52-294 (326)
204 1yr2_A Prolyl oligopeptidase; 99.2 5.8E-09 2E-13 94.1 23.5 238 12-278 115-392 (741)
205 1qks_A Cytochrome CD1 nitrite 99.2 7E-08 2.4E-12 84.0 28.6 254 5-280 198-478 (567)
206 3iuj_A Prolyl endopeptidase; h 99.2 2.1E-08 7.3E-13 89.7 25.5 243 4-278 129-404 (693)
207 2mad_H Methylamine dehydrogena 99.1 2.7E-07 9.3E-12 76.2 28.3 248 8-279 70-350 (373)
208 3g4e_A Regucalcin; six bladed 99.1 2.2E-07 7.6E-12 74.2 24.0 162 4-174 54-229 (297)
209 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 1.3E-07 4.5E-12 75.8 22.7 201 4-226 71-298 (314)
210 3dsm_A Uncharacterized protein 99.0 2.4E-07 8.1E-12 75.2 24.0 220 23-279 15-253 (328)
211 3sjl_D Methylamine dehydrogena 99.0 2.3E-07 7.8E-12 76.3 21.0 248 8-279 82-363 (386)
212 2ghs_A AGR_C_1268P; regucalcin 98.9 1.7E-06 5.7E-11 70.1 25.1 160 4-173 90-259 (326)
213 3no2_A Uncharacterized protein 98.9 6.5E-07 2.2E-11 70.8 22.0 155 5-176 38-197 (276)
214 2qe8_A Uncharacterized protein 98.9 2.1E-07 7.3E-12 76.0 17.7 227 3-268 66-310 (343)
215 3iuj_A Prolyl endopeptidase; h 98.9 4E-07 1.4E-11 81.5 20.7 204 45-278 126-358 (693)
216 3hrp_A Uncharacterized protein 98.8 1.8E-06 6.2E-11 72.2 22.9 205 49-278 132-353 (409)
217 2qe8_A Uncharacterized protein 98.8 1.7E-07 5.8E-12 76.5 16.2 235 5-277 18-276 (343)
218 3c75_H MADH, methylamine dehyd 98.8 2.4E-07 8.1E-12 77.5 15.7 249 8-279 122-402 (426)
219 3dr2_A Exported gluconolactona 98.7 3.9E-06 1.3E-10 67.2 20.6 156 4-173 86-266 (305)
220 2hz6_A Endoplasmic reticulum t 98.6 5.1E-08 1.7E-12 80.5 5.9 180 14-227 8-192 (369)
221 2ece_A 462AA long hypothetical 98.6 6.8E-05 2.3E-09 62.5 24.1 237 13-266 93-399 (462)
222 3sjl_D Methylamine dehydrogena 98.5 4.1E-05 1.4E-09 63.0 21.8 148 10-173 39-207 (386)
223 2mad_H Methylamine dehydrogena 98.5 0.00033 1.1E-08 57.7 28.2 144 11-172 28-194 (373)
224 1mda_H Methylamine dehydrogena 98.4 8.8E-06 3E-10 66.8 15.4 103 16-122 33-157 (368)
225 2fp8_A Strictosidine synthase; 98.3 0.00066 2.2E-08 54.5 26.7 241 6-278 21-312 (322)
226 2iwa_A Glutamine cyclotransfer 98.3 0.00056 1.9E-08 53.3 23.9 209 39-278 11-236 (266)
227 2xe4_A Oligopeptidase B; hydro 98.3 6.2E-05 2.1E-09 67.9 19.0 203 5-225 175-396 (751)
228 3c75_H MADH, methylamine dehyd 98.3 0.00011 3.6E-09 61.5 18.8 143 13-172 82-246 (426)
229 3mbr_X Glutamine cyclotransfer 98.3 0.00067 2.3E-08 51.9 21.2 210 38-277 10-231 (243)
230 3nol_A Glutamine cyclotransfer 98.3 0.00036 1.2E-08 53.9 19.6 208 39-277 33-252 (262)
231 2ece_A 462AA long hypothetical 98.2 0.0017 5.8E-08 54.2 25.1 202 54-278 88-351 (462)
232 3hxj_A Pyrrolo-quinoline quino 98.2 0.00062 2.1E-08 54.5 21.2 217 15-278 107-323 (330)
233 1fwx_A Nitrous oxide reductase 98.1 0.00057 2E-08 59.0 19.9 199 14-227 100-361 (595)
234 1kb0_A Quinohemoprotein alcoho 98.1 0.00066 2.3E-08 60.5 20.9 156 14-177 127-349 (677)
235 3nok_A Glutaminyl cyclase; bet 98.1 0.002 6.8E-08 49.8 22.2 207 40-277 46-262 (268)
236 3nol_A Glutamine cyclotransfer 98.0 0.0014 4.7E-08 50.7 18.2 155 6-176 45-203 (262)
237 2fp8_A Strictosidine synthase; 98.0 0.0035 1.2E-07 50.2 22.9 156 5-173 81-268 (322)
238 2iwa_A Glutamine cyclotransfer 98.0 0.003 1E-07 49.2 21.8 198 6-226 23-236 (266)
239 1mda_H Methylamine dehydrogena 98.0 0.00036 1.2E-08 57.2 15.5 67 8-76 69-156 (368)
240 1k3i_A Galactose oxidase precu 98.0 0.0024 8.2E-08 56.7 22.0 114 8-123 190-323 (656)
241 1yiq_A Quinohemoprotein alcoho 98.0 0.0012 4.2E-08 58.9 20.0 162 15-177 121-341 (689)
242 3tc9_A Hypothetical hydrolase; 97.9 0.0063 2.2E-07 51.1 25.1 155 6-173 139-300 (430)
243 1kb0_A Quinohemoprotein alcoho 97.9 0.0026 9E-08 56.6 21.5 74 8-81 247-349 (677)
244 1yiq_A Quinohemoprotein alcoho 97.9 0.0056 1.9E-07 54.7 23.3 73 52-125 239-340 (689)
245 3qqz_A Putative uncharacterize 97.9 0.004 1.4E-07 48.1 25.5 168 4-173 27-203 (255)
246 2xe4_A Oligopeptidase B; hydro 97.9 0.0019 6.4E-08 58.3 20.2 114 49-173 175-303 (751)
247 2p4o_A Hypothetical protein; p 97.8 0.0067 2.3E-07 48.2 28.4 238 5-268 33-278 (306)
248 1npe_A Nidogen, entactin; glyc 97.8 0.0063 2.1E-07 47.3 28.9 194 6-226 38-237 (267)
249 2hz6_A Endoplasmic reticulum t 97.8 1.7E-06 5.7E-11 71.4 -1.1 148 9-176 43-194 (369)
250 2xbg_A YCF48-like protein; pho 97.8 0.0092 3.2E-07 48.0 25.6 234 4-272 36-272 (327)
251 3hxj_A Pyrrolo-quinoline quino 97.7 0.0046 1.6E-07 49.3 17.9 184 6-225 139-322 (330)
252 2p9w_A MAL S 1 allergenic prot 97.6 0.015 5E-07 46.6 18.5 161 7-173 16-214 (334)
253 4a2l_A BT_4663, two-component 97.5 0.048 1.6E-06 49.5 28.4 198 4-225 406-612 (795)
254 2xbg_A YCF48-like protein; pho 97.5 0.025 8.4E-07 45.5 27.0 238 5-276 81-319 (327)
255 3v9f_A Two-component system se 97.4 0.067 2.3E-06 48.4 27.9 200 4-225 407-609 (781)
256 1npe_A Nidogen, entactin; glyc 97.4 0.027 9.1E-07 43.6 28.2 226 16-278 2-237 (267)
257 1fwx_A Nitrous oxide reductase 97.3 0.00073 2.5E-08 58.4 8.2 113 49-162 278-406 (595)
258 3q7m_A Lipoprotein YFGL, BAMB; 97.3 0.056 1.9E-06 44.0 24.1 229 14-279 102-337 (376)
259 4a2l_A BT_4663, two-component 97.2 0.12 4.1E-06 46.9 31.4 244 4-277 357-612 (795)
260 3pbp_A Nucleoporin NUP82; beta 97.2 0.07 2.4E-06 44.2 19.0 118 49-169 67-207 (452)
261 1k3i_A Galactose oxidase precu 97.2 0.078 2.7E-06 47.0 20.5 114 52-174 190-323 (656)
262 1kv9_A Type II quinohemoprotei 97.2 0.12 4.1E-06 45.9 21.6 155 15-177 117-336 (668)
263 3qqz_A Putative uncharacterize 97.0 0.069 2.4E-06 41.2 21.4 216 42-276 21-250 (255)
264 4hw6_A Hypothetical protein, I 97.0 0.11 3.9E-06 43.4 28.5 156 6-173 141-303 (433)
265 1cru_A Protein (soluble quinop 97.0 0.12 4.2E-06 43.5 18.6 108 5-112 28-163 (454)
266 3nok_A Glutaminyl cyclase; bet 97.0 0.084 2.9E-06 40.8 17.0 139 12-161 102-253 (268)
267 3v9f_A Two-component system se 96.9 0.22 7.7E-06 45.0 27.9 245 4-278 313-567 (781)
268 3q7m_A Lipoprotein YFGL, BAMB; 96.9 0.13 4.4E-06 41.9 25.1 149 15-176 53-209 (376)
269 3pbp_A Nucleoporin NUP82; beta 96.9 0.043 1.5E-06 45.5 14.0 114 5-119 67-208 (452)
270 4hw6_A Hypothetical protein, I 96.8 0.11 3.8E-06 43.5 17.2 158 7-172 231-431 (433)
271 2ism_A Putative oxidoreductase 96.8 0.15 5.1E-06 41.4 27.4 103 6-111 33-153 (352)
272 3a9g_A Putative uncharacterize 96.8 0.1 3.5E-06 42.4 16.1 104 5-111 30-153 (354)
273 2p4o_A Hypothetical protein; p 96.8 0.14 4.9E-06 40.4 19.9 157 5-173 73-241 (306)
274 3mbr_X Glutamine cyclotransfer 96.8 0.12 4.1E-06 39.4 15.2 135 16-162 76-222 (243)
275 1kv9_A Type II quinohemoprotei 96.5 0.1 3.5E-06 46.4 15.1 74 8-81 234-336 (668)
276 3das_A Putative oxidoreductase 96.5 0.26 9.1E-06 39.8 27.4 107 5-111 33-158 (347)
277 2g8s_A Glucose/sorbosone dehyd 96.3 0.24 8.3E-06 40.2 15.6 107 5-112 19-149 (353)
278 1tl2_A L10, protein (tachylect 96.3 0.22 7.6E-06 37.3 14.8 150 5-165 42-201 (236)
279 3tc9_A Hypothetical hydrolase; 96.2 0.42 1.5E-05 39.9 19.4 71 6-77 228-300 (430)
280 3kya_A Putative phosphatase; s 96.1 0.57 2E-05 39.8 25.2 161 6-172 141-339 (496)
281 1n7d_A LDL receptor, low-densi 95.9 0.19 6.4E-06 45.0 13.7 155 6-174 408-571 (699)
282 2p9w_A MAL S 1 allergenic prot 95.7 0.26 9E-06 39.4 12.4 116 6-123 65-215 (334)
283 3p5b_L Low density lipoprotein 95.7 0.74 2.5E-05 38.0 26.0 159 4-174 112-277 (400)
284 2xn4_A Kelch-like protein 2; s 95.5 0.66 2.3E-05 36.3 22.1 147 14-174 15-182 (302)
285 3v64_C Agrin; beta propeller, 95.5 0.78 2.7E-05 37.0 25.5 155 6-174 75-234 (349)
286 1tl2_A L10, protein (tachylect 95.4 0.57 1.9E-05 35.2 13.0 111 48-168 41-157 (236)
287 3v65_B Low-density lipoprotein 95.4 0.94 3.2E-05 37.1 23.6 194 5-224 117-315 (386)
288 2xn4_A Kelch-like protein 2; s 95.2 0.86 3E-05 35.6 18.1 147 14-174 61-229 (302)
289 2ad6_A Methanol dehydrogenase 95.2 1.5 5E-05 38.2 17.1 55 26-81 273-338 (571)
290 3m0c_C LDL receptor, low-densi 94.9 2.2 7.5E-05 38.7 25.7 158 5-174 425-589 (791)
291 1ijq_A LDL receptor, low-densi 94.7 1.3 4.3E-05 35.2 26.5 156 5-174 31-195 (316)
292 3das_A Putative oxidoreductase 94.5 1.5 5.2E-05 35.4 15.7 113 47-162 31-158 (347)
293 2ism_A Putative oxidoreductase 94.5 1.2 4.3E-05 35.9 13.6 106 50-161 33-152 (352)
294 3v64_C Agrin; beta propeller, 94.5 1.6 5.3E-05 35.2 28.7 232 5-276 35-272 (349)
295 1cru_A Protein (soluble quinop 94.4 1.3 4.3E-05 37.4 13.7 111 49-162 28-162 (454)
296 3ii7_A Kelch-like protein 7; p 94.4 1.4 4.9E-05 34.4 19.1 147 14-174 55-225 (306)
297 2vpj_A Kelch-like protein 12; 94.4 1.4 4.9E-05 34.3 23.9 148 14-174 14-184 (301)
298 1n7d_A LDL receptor, low-densi 94.3 2.7 9.4E-05 37.5 16.6 221 24-277 385-612 (699)
299 2vpj_A Kelch-like protein 12; 94.3 1.5 5.1E-05 34.2 20.3 147 14-174 62-231 (301)
300 3amr_A 3-phytase; beta-propell 94.2 1.8 6.2E-05 34.9 23.3 143 14-166 39-202 (355)
301 3sov_A LRP-6, low-density lipo 94.1 1.7 6E-05 34.5 24.3 156 6-174 37-197 (318)
302 1zgk_A Kelch-like ECH-associat 94.0 1.7 5.9E-05 34.1 17.9 147 14-174 70-240 (308)
303 3ii7_A Kelch-like protein 7; p 94.0 1.7 5.9E-05 34.0 24.2 104 15-123 12-127 (306)
304 3v65_B Low-density lipoprotein 93.4 2.7 9.2E-05 34.4 28.1 215 24-276 95-315 (386)
305 3a9g_A Putative uncharacterize 93.4 1.3 4.5E-05 35.8 11.7 107 49-162 30-153 (354)
306 1zgk_A Kelch-like ECH-associat 93.2 2.5 8.4E-05 33.2 22.3 147 14-174 24-193 (308)
307 3sre_A PON1, serum paraoxonase 92.9 3.1 0.00011 33.7 20.7 156 7-173 53-251 (355)
308 3sre_A PON1, serum paraoxonase 92.4 3.2 0.00011 33.6 12.5 103 5-113 166-287 (355)
309 3kya_A Putative phosphatase; s 92.3 4.7 0.00016 34.3 17.9 159 7-173 250-474 (496)
310 1flg_A Protein (quinoprotein e 92.1 4.9 0.00017 35.0 14.2 53 68-124 465-517 (582)
311 2uvk_A YJHT; unknown function, 92.1 2.7 9.4E-05 33.6 12.1 51 25-76 168-224 (357)
312 2ad6_A Methanol dehydrogenase 91.5 6.5 0.00022 34.1 23.3 65 15-82 115-189 (571)
313 2wg3_C Hedgehog-interacting pr 91.4 5.1 0.00018 33.7 13.1 111 51-163 17-158 (463)
314 4asc_A Kelch repeat and BTB do 91.3 4.4 0.00015 31.8 16.6 150 11-174 42-221 (315)
315 2wg3_C Hedgehog-interacting pr 90.8 6.5 0.00022 33.1 13.2 108 6-114 16-160 (463)
316 1w6s_A Methanol dehydrogenase 90.7 8 0.00027 33.8 23.2 64 18-82 124-195 (599)
317 1flg_A Protein (quinoprotein e 90.5 8.2 0.00028 33.6 20.6 56 25-81 291-358 (582)
318 3p5b_L Low density lipoprotein 89.9 7.2 0.00025 32.0 28.6 220 24-276 91-317 (400)
319 1ijq_A LDL receptor, low-densi 89.6 6.5 0.00022 31.0 30.6 220 25-277 10-236 (316)
320 2g8s_A Glucose/sorbosone dehyd 89.5 3.5 0.00012 33.3 10.2 108 50-161 20-147 (353)
321 1w6s_A Methanol dehydrogenase 89.4 10 0.00035 33.1 20.7 72 9-81 246-345 (599)
322 3ei3_A DNA damage-binding prot 88.7 17 0.00058 34.7 26.6 224 27-275 809-1058(1158)
323 3s94_A LRP-6, low-density lipo 88.7 12 0.00041 32.9 22.4 157 5-174 41-202 (619)
324 4asc_A Kelch repeat and BTB do 88.1 8.1 0.00028 30.2 21.9 143 17-174 7-174 (315)
325 4a0p_A LRP6, LRP-6, low-densit 87.9 14 0.00046 32.6 23.9 155 5-174 38-197 (628)
326 3m0c_C LDL receptor, low-densi 87.5 16 0.00056 33.1 29.9 220 24-276 403-629 (791)
327 2woz_A Kelch repeat and BTB do 85.7 11 0.00038 29.4 18.6 150 11-174 53-231 (318)
328 3amr_A 3-phytase; beta-propell 85.4 13 0.00045 30.0 20.0 147 24-173 98-262 (355)
329 2zwa_A Leucine carboxyl methyl 84.2 22 0.00077 31.6 13.6 68 13-80 499-579 (695)
330 2zwa_A Leucine carboxyl methyl 83.6 24 0.00081 31.5 20.7 153 13-174 396-577 (695)
331 2uvk_A YJHT; unknown function, 81.5 18 0.00062 28.7 14.9 53 14-68 65-128 (357)
332 3sov_A LRP-6, low-density lipo 79.1 22 0.00074 28.1 25.3 219 24-277 12-236 (318)
333 2woz_A Kelch repeat and BTB do 78.9 21 0.00072 27.8 22.7 144 16-174 17-184 (318)
334 3ei3_A DNA damage-binding prot 76.2 55 0.0019 31.2 28.1 102 17-122 525-635 (1158)
335 3s94_A LRP-6, low-density lipo 73.5 47 0.0016 29.1 24.3 156 5-174 350-510 (619)
336 3zwu_A Alkaline phosphatase PH 68.4 29 0.00099 30.3 8.9 57 7-64 479-547 (592)
337 1xi4_A Clathrin heavy chain; a 66.7 1E+02 0.0035 30.4 16.7 106 10-124 72-189 (1630)
338 1sqj_A OXG-RCBH, oligoxylogluc 65.3 80 0.0027 28.6 18.5 157 4-164 15-190 (789)
339 3f7f_A Nucleoporin NUP120; nuc 64.4 80 0.0027 28.3 11.4 30 49-80 223-252 (729)
340 2xzh_A Clathrin heavy chain 1; 64.2 55 0.0019 26.3 22.0 147 25-176 126-292 (365)
341 4gq2_M Nucleoporin NUP120; bet 61.6 68 0.0023 29.8 10.6 32 5-36 237-268 (950)
342 3s25_A Hypothetical 7-bladed b 60.0 60 0.002 25.3 13.1 102 9-123 58-176 (302)
343 4a0p_A LRP6, LRP-6, low-densit 59.6 91 0.0031 27.3 26.6 159 4-174 340-508 (628)
344 1xi4_A Clathrin heavy chain; a 55.7 1.6E+02 0.0056 29.1 17.1 149 24-177 124-292 (1630)
345 3sbq_A Nitrous-oxide reductase 55.7 59 0.002 28.4 8.2 70 8-78 327-408 (638)
346 4a9v_A PHOX; hydrolase, beta-p 55.0 79 0.0027 27.5 9.0 58 6-65 478-548 (592)
347 4gz8_A Semaphorin-3A; multi-do 47.9 76 0.0026 28.1 8.1 62 106-169 431-495 (667)
348 2be1_A Serine/threonine-protei 46.9 84 0.0029 25.1 7.7 106 16-124 11-131 (339)
349 4fhn_B Nucleoporin NUP120; pro 45.5 47 0.0016 31.6 6.9 31 50-80 240-270 (1139)
350 3zwu_A Alkaline phosphatase PH 44.0 1.3E+02 0.0043 26.3 8.8 56 52-109 480-547 (592)
351 4gq2_M Nucleoporin NUP120; bet 43.3 23 0.0008 32.9 4.4 32 49-80 237-268 (950)
352 3f7f_A Nucleoporin NUP120; nuc 36.1 2.4E+02 0.0082 25.3 10.2 30 6-37 224-253 (729)
353 3b7f_A Glycosyl hydrolase, BNR 33.8 1.8E+02 0.0062 23.2 23.9 156 4-165 55-254 (394)
354 2xzh_A Clathrin heavy chain 1; 30.8 2.1E+02 0.0072 23.1 26.7 198 9-227 72-290 (365)
355 4fhn_B Nucleoporin NUP120; pro 30.4 57 0.002 31.0 4.9 31 6-36 240-270 (1139)
356 1q47_A Semaphorin 3A; beta pro 28.6 1.7E+02 0.006 24.7 7.1 62 106-169 423-487 (495)
357 3sbq_A Nitrous-oxide reductase 27.7 1.6E+02 0.0055 25.7 6.6 73 51-123 326-408 (638)
358 4h3o_A Lectin; cadmium, plant 27.6 1.2E+02 0.0041 19.2 7.5 58 15-76 19-76 (105)
359 4a9v_A PHOX; hydrolase, beta-p 24.3 3.6E+02 0.012 23.5 9.0 59 51-111 479-549 (592)
360 3s25_A Hypothetical 7-bladed b 23.8 2.5E+02 0.0087 21.7 11.5 91 9-113 109-204 (302)
361 1ukf_A Avirulence protein AVRP 23.7 87 0.003 22.5 3.6 33 6-38 121-154 (188)
No 1
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=8.6e-45 Score=299.45 Aligned_cols=272 Identities=50% Similarity=0.974 Sum_probs=218.8
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|.+.|++++|+|+|++||+|+.|+.++||+...+...++..+.+|...|.+++|+|++++|++|+.|++|++||+.....
T Consensus 60 h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~ 139 (345)
T 3fm0_A 60 HQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE 139 (345)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSC
T ss_pred cCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCC
Confidence 78899999999999999999999999999988777777889999999999999999999999999999999999987766
Q ss_pred eEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEe
Q 023500 82 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 161 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 161 (281)
..++..+.+|...|.+++|+|++.+|++++.|++|++|+.+... +.+... ..+|...|++++|+|++++|++|
T Consensus 140 ~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~---~~~~~~----~~~h~~~v~~l~~sp~g~~l~s~ 212 (345)
T 3fm0_A 140 YECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDD---WVCCAT----LEGHESTVWSLAFDPSGQRLASC 212 (345)
T ss_dssp EEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTE---EEEEEE----ECCCSSCEEEEEECTTSSEEEEE
T ss_pred eEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCC---EEEEEE----ecCCCCceEEEEECCCCCEEEEE
Confidence 66778889999999999999999999999999999999875431 112222 24799999999999999999999
Q ss_pred eCCCcEEEEeCCccccccCC----CCcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEEecccCCCcCCccc
Q 023500 162 SDDLTIKIWGADITRMQSGD----GYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSY 236 (281)
Q Consensus 162 ~~d~~i~~w~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~ 236 (281)
+.|++|++|+.......... ....+.....+.+.|...|.++.|++++ .+++++.|+.+++|+.........+..
T Consensus 213 s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~ 292 (345)
T 3fm0_A 213 SDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTF 292 (345)
T ss_dssp ETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCE
T ss_pred eCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeE
Confidence 99999999986322111100 0112233445556688899999999864 688999999999998754322222222
Q ss_pred eeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEcccC
Q 023500 237 KMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANT 280 (281)
Q Consensus 237 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~~ 280 (281)
........+|...|++++|+|+++.+|++|+.||.|++|++..+
T Consensus 293 ~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~ 336 (345)
T 3fm0_A 293 SLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRP 336 (345)
T ss_dssp EEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-
T ss_pred EEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCC
Confidence 22223346899999999999987668999999999999998754
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.3e-42 Score=280.10 Aligned_cols=244 Identities=18% Similarity=0.309 Sum_probs=202.8
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|.+.|++++|+|++++|++|+.|+.|+|||..++. ++..+.+|..+|.+++|+|++++|++|+.|++|++||+..++
T Consensus 12 h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~- 88 (304)
T 2ynn_A 12 RSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQV--EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE- 88 (304)
T ss_dssp ECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE--EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC-
T ss_pred CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc--eeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCc-
Confidence 78899999999999999999999999999987764 567888999999999999999999999999999999997664
Q ss_pred eEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEcc-CCCEEEE
Q 023500 82 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNA-KGDKLVS 160 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s 160 (281)
++..+.+|...|++++|+|++.++++|+.|++|++|+++... ... ....+|...|.+++|+| ++..|++
T Consensus 89 --~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~----~~~----~~~~~h~~~v~~v~~~p~~~~~l~s 158 (304)
T 2ynn_A 89 --KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW----ALE----QTFEGHEHFVMCVAFNPKDPSTFAS 158 (304)
T ss_dssp --EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTT----EEE----EEECCCCSCEEEEEECTTCTTEEEE
T ss_pred --EEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCc----chh----hhhcccCCcEEEEEECCCCCCEEEE
Confidence 456788999999999999999999999999999999886531 111 22347999999999999 5789999
Q ss_pred eeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCC--C-ceeeecCCCCcEEEEecccCCCcCCccce
Q 023500 161 CSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR--E-GIIASGAADDSVQFFVESKDDLIDGPSYK 237 (281)
Q Consensus 161 ~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 237 (281)
|+.|++|++||+....+ .......+...+..+.+.+ + .++++++.|+.+++|+....
T Consensus 159 gs~D~~v~iwd~~~~~~-----------~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~--------- 218 (304)
T 2ynn_A 159 GCLDRTVKVWSLGQSTP-----------NFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK--------- 218 (304)
T ss_dssp EETTSEEEEEETTCSSC-----------SEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTT---------
T ss_pred EeCCCeEEEEECCCCCc-----------cceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCC---------
Confidence 99999999999853221 1222233556777777765 3 47999999999999977542
Q ss_pred eeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 238 MLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 238 ~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
.......+|...|++++|+|+++ +|++|+.||.|+|||+..
T Consensus 219 ~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~Dg~i~iWd~~~ 259 (304)
T 2ynn_A 219 SCVATLEGHMSNVSFAVFHPTLP-IIISGSEDGTLKIWNSST 259 (304)
T ss_dssp EEEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTT
T ss_pred ccceeeCCCCCCEEEEEECCCCC-EEEEEcCCCeEEEEECCC
Confidence 23444568999999999999875 688999999999999864
No 3
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-42 Score=281.75 Aligned_cols=263 Identities=41% Similarity=0.821 Sum_probs=199.3
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCC-----ceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGG-----DYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEV 76 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~-----~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~ 76 (281)
|...|++++|+|++++||+|+.|+.|+||+.... ...++..+.+|...|.+++|+|+|++|++|+.|++|++||+
T Consensus 57 h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~ 136 (330)
T 2hes_X 57 HKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWET 136 (330)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEEC
T ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEec
Confidence 8889999999999999999999999999997432 23456778899999999999999999999999999999999
Q ss_pred cC-CCeeEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccC-
Q 023500 77 MP-GNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK- 154 (281)
Q Consensus 77 ~~-~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~- 154 (281)
.. +...+++..+.+|...|.+++|+|++.+|++++.|++|++|+..... ++++..+ .+|...|++++|+|+
T Consensus 137 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~---~~~~~~~----~~h~~~v~~~~~~~~~ 209 (330)
T 2hes_X 137 DESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDD---WECVAVL----NGHEGTVWSSDFDKTE 209 (330)
T ss_dssp CTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTE---EEEEEEE----CCCSSCEEEEEECCSS
T ss_pred cCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCC---eeEEEEc----cCCCCcEEEEEecCCC
Confidence 43 34445677889999999999999999999999999999999865421 2233333 479999999999998
Q ss_pred -CCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecCCCCcEEEEecccCCCcCC
Q 023500 155 -GDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDG 233 (281)
Q Consensus 155 -~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 233 (281)
+..|++|+.|++|++|++...... ....+.....+...|...|.+++|++++.+++++.|+.+++|+.....
T Consensus 210 ~~~~l~s~s~D~~v~iw~~~~~~~~---~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~---- 282 (330)
T 2hes_X 210 GVFRLCSGSDDSTVRVWKYMGDDED---DQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGE---- 282 (330)
T ss_dssp SSCEEEEEETTSCEEEEEEEEECTT---SCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTE----
T ss_pred CeeEEEEEeCCCeEEEEEecCCCcc---ccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCc----
Confidence 678999999999999987533211 011112222333347889999999999999999999999999764311
Q ss_pred ccceeeeeeccCCCC-CeeEEEEcCC-CCeeEEEeCCCCeEEEEEcccC
Q 023500 234 PSYKMLLKKEKAHDM-DVNSVQWSPG-ERRLLASASDDGMIKIWELANT 280 (281)
Q Consensus 234 ~~~~~~~~~~~~h~~-~v~~~~~~~~-~~~~~~s~~~Dg~v~iw~~~~~ 280 (281)
..........|.. .|++++|+|. +..+|++|+.||.|+||++...
T Consensus 283 --~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~~ 329 (330)
T 2hes_X 283 --WKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEKA 329 (330)
T ss_dssp --EEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC---
T ss_pred --eEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEeccC
Confidence 1112223356776 8999999993 2357899999999999998653
No 4
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.1e-41 Score=277.75 Aligned_cols=244 Identities=21% Similarity=0.267 Sum_probs=195.6
Q ss_pred ccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceee--eeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCC
Q 023500 3 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYEC--VATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN 80 (281)
Q Consensus 3 ~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~ 80 (281)
...|++++|+|++ .|++|+.||.|+|||..+++... ...+.+|.+.|++++|+|+|++|++|+.|++|++||+..+
T Consensus 82 ~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~- 159 (344)
T 4gqb_B 82 EAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQ- 159 (344)
T ss_dssp SSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-
T ss_pred CCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC-
Confidence 4679999999985 57799999999999987765322 2345689999999999999999999999999999999765
Q ss_pred eeEEeEeecCCccceeEEEecCCCC-eEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccC-CCEE
Q 023500 81 EFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK-GDKL 158 (281)
Q Consensus 81 ~~~~~~~~~~~~~~v~~v~~~p~~~-~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l 158 (281)
+++..+.+|...|++++|+|++. ++++++.|++|++||++... +...+. ...|...+.+++|+|+ +.+|
T Consensus 160 --~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~-----~~~~~~--~~~~~~~~~~~~~~p~~~~~l 230 (344)
T 4gqb_B 160 --VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPK-----PASQIG--CSAPGYLPTSLAWHPQQSEVF 230 (344)
T ss_dssp --EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSS-----CEEECC------CCCEEEEEECSSCTTEE
T ss_pred --cEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccc-----eeeeee--cceeeccceeeeecCCCCcce
Confidence 35678899999999999999985 78999999999999987643 222222 1234567899999985 5688
Q ss_pred EEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc--eeeecCCCCcEEEEecccCCCcCCccc
Q 023500 159 VSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGAADDSVQFFVESKDDLIDGPSY 236 (281)
Q Consensus 159 ~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~ 236 (281)
++|+.|++|++||++..++ +..+. .|...|.+++|+|++ ++++++.|+.+++|+....
T Consensus 231 ~sg~~dg~v~~wd~~~~~~-----------~~~~~-~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~-------- 290 (344)
T 4gqb_B 231 VFGDENGTVSLVDTKSTSC-----------VLSSA-VHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS-------- 290 (344)
T ss_dssp EEEETTSEEEEEESCC--C-----------CEEEE-CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC--------
T ss_pred EEeccCCcEEEEECCCCcE-----------EEEEc-CCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC--------
Confidence 9999999999999864321 22222 478899999999875 5889999999999976432
Q ss_pred eeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 237 KMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 237 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
.+ ....+|...|++++|+|+++.+|+++|.|++|++|++..
T Consensus 291 -~~-~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 291 -EL-FRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp -EE-EEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred -cE-EEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 11 234689999999999999888899999999999999864
No 5
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=8.8e-41 Score=269.93 Aligned_cols=256 Identities=26% Similarity=0.394 Sum_probs=202.0
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcC--CCCEEEEecCCCcEEEEEecCC
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEVMPG 79 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~--~~~~l~s~~~d~~v~~w~~~~~ 79 (281)
|.+.|++++|+|+|++||+|+.|++|+||+..+....++..+.+|.+.|++++|+| ++++|++|+.|++|++||+..+
T Consensus 8 h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~ 87 (297)
T 2pm7_B 8 HNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENG 87 (297)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSS
T ss_pred CcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCC
Confidence 88999999999999999999999999999987554456788999999999999986 4899999999999999999754
Q ss_pred CeeEEeEeecCCccceeEEEecCC--CCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccC---
Q 023500 80 NEFECVSVLQGHAQDVKMVQWHPT--MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK--- 154 (281)
Q Consensus 80 ~~~~~~~~~~~~~~~v~~v~~~p~--~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--- 154 (281)
. ...+..+.+|...|.+++|+|+ +.++++++.|++|++|++....... .. ...+|...|.+++|+|+
T Consensus 88 ~-~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~---~~----~~~~h~~~v~~~~~~p~~~~ 159 (297)
T 2pm7_B 88 R-WSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS---PI----IIDAHAIGVNSASWAPATIE 159 (297)
T ss_dssp C-BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBC---CE----EEECCSSCEEEEEECCCC--
T ss_pred c-eEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCcee---ee----eeecccCccceEeecCCccc
Confidence 3 1234567789999999999998 7899999999999999987542110 11 12378899999999997
Q ss_pred ----------CCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCC----ceeeecCCCCcE
Q 023500 155 ----------GDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE----GIIASGAADDSV 220 (281)
Q Consensus 155 ----------~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~~~~~~d~~~ 220 (281)
+++|++|+.|++|++||.+.... .+.....+ ..|...|.+++|+|+ .++++++.|+.+
T Consensus 160 ~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~-------~~~~~~~l-~~H~~~V~~v~~sp~~~~~~~las~s~D~~v 231 (297)
T 2pm7_B 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ-------TYVLESTL-EGHSDWVRDVAWSPTVLLRSYMASVSQDRTC 231 (297)
T ss_dssp ----------CCEEEEEETTSCEEEEEEETTTT-------EEEEEEEE-CCCSSCEEEEEECCCCSSSEEEEEEETTSCE
T ss_pred ccccCCCCCCcceEEEEcCCCcEEEEEEcCCCc-------eEEEEEEe-cCCCCceEEEEECCCCCCceEEEEEECCCcE
Confidence 46999999999999998753221 01112223 247889999999997 478999999999
Q ss_pred EEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEcc
Q 023500 221 QFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 278 (281)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~ 278 (281)
++|+...... ..... ......|...|.+++|+|+++ +|++++.|+.|+||+..
T Consensus 232 ~iWd~~~~~~---~~~~~-~~~~~~~~~~v~~~~~s~~g~-~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 232 IIWTQDNEQG---PWKKT-LLKEEKFPDVLWRASWSLSGN-VLALSGGDNKVTLWKEN 284 (297)
T ss_dssp EEEEESSTTS---CCEEE-ESSSSCCSSCEEEEEECSSSC-CEEEEETTSCEEEEEEC
T ss_pred EEEEeCCCCC---cccee-eeecccCCCcEEEEEECCCCC-EEEEEcCCCcEEEEEEC
Confidence 9998754211 01111 111246788999999999875 67899999999999975
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=6.9e-41 Score=282.29 Aligned_cols=242 Identities=29% Similarity=0.562 Sum_probs=205.3
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|...|++++|+|++++|++|+.|+.|+|||..+++ ....+.+|.+.|.+++|+|++.+|++|+.|++|++||+....
T Consensus 107 h~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~--~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~- 183 (410)
T 1vyh_C 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD--FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE- 183 (410)
T ss_dssp CSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCC--CCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSC-
T ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--EEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-
Confidence 78899999999999999999999999999988765 467889999999999999999999999999999999986543
Q ss_pred eEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEe
Q 023500 82 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 161 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 161 (281)
++..+.+|...|.+++|+|+++++++++.|++|++|++.... ++..+ .+|...|.++.|+|++.+|++|
T Consensus 184 --~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~-----~~~~~----~~h~~~v~~~~~~~~g~~l~s~ 252 (410)
T 1vyh_C 184 --CIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY-----CVKTF----TGHREWVRMVRPNQDGTLIASC 252 (410)
T ss_dssp --EEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC-----EEEEE----ECCSSCEEEEEECTTSSEEEEE
T ss_pred --eeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc-----EEEEE----eCCCccEEEEEECCCCCEEEEE
Confidence 567788999999999999999999999999999999987542 33333 3788999999999999999999
Q ss_pred eCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCC---------------------ceeeecCCCCcE
Q 023500 162 SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE---------------------GIIASGAADDSV 220 (281)
Q Consensus 162 ~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---------------------~~~~~~~~d~~~ 220 (281)
+.|++|++||+..... ...+ ..|...+.++.|+|+ .++++++.|+.+
T Consensus 253 s~D~~v~vwd~~~~~~-----------~~~~-~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i 320 (410)
T 1vyh_C 253 SNDQTVRVWVVATKEC-----------KAEL-REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320 (410)
T ss_dssp ETTSCEEEEETTTCCE-----------EEEE-CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEE
T ss_pred cCCCeEEEEECCCCce-----------eeEe-cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeE
Confidence 9999999999864321 1122 236778899999874 368999999999
Q ss_pred EEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 221 QFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
++|+.... .......+|...|++++|+|+++ +|++|+.||.|++||+.+
T Consensus 321 ~iwd~~~~---------~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~D~~i~vwd~~~ 369 (410)
T 1vyh_C 321 KMWDVSTG---------MCLMTLVGHDNWVRGVLFHSGGK-FILSCADDKTLRVWDYKN 369 (410)
T ss_dssp EEEETTTT---------EEEEEEECCSSCEEEEEECSSSS-CEEEEETTTEEEEECCTT
T ss_pred EEEECCCC---------ceEEEEECCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCC
Confidence 99977542 22334567999999999999876 578999999999999864
No 7
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.4e-40 Score=271.30 Aligned_cols=260 Identities=28% Similarity=0.553 Sum_probs=203.8
Q ss_pred Ccc-ceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeee-ecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCC
Q 023500 2 HTR-TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVAT-LEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPG 79 (281)
Q Consensus 2 h~~-~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~-~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~ 79 (281)
|.. .|++++|+|+|++||+|+.|+.|+||+..++...+... ..+|...|.+++|+|+|++|++|+.|+++++|++...
T Consensus 14 h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~ 93 (345)
T 3fm0_A 14 HPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQD 93 (345)
T ss_dssp STTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC
T ss_pred CCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCC
Confidence 666 89999999999999999999999999987765433333 3689999999999999999999999999999998654
Q ss_pred CeeEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEE
Q 023500 80 NEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV 159 (281)
Q Consensus 80 ~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 159 (281)
. .+++..+.+|...|.+++|+|++++|++++.|++|++|++..... ..++.. ..+|...|.+++|+|++++|+
T Consensus 94 ~-~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~--~~~~~~----~~~h~~~v~~~~~~p~~~~l~ 166 (345)
T 3fm0_A 94 D-FECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE--YECVSV----LNSHTQDVKHVVWHPSQELLA 166 (345)
T ss_dssp --EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSC--EEEEEE----ECCCCSCEEEEEECSSSSCEE
T ss_pred C-eEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCC--eEEEEE----ecCcCCCeEEEEECCCCCEEE
Confidence 3 346778899999999999999999999999999999999875421 122222 247889999999999999999
Q ss_pred EeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEEecccCCCcCC-----
Q 023500 160 SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDG----- 233 (281)
Q Consensus 160 s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~----- 233 (281)
+++.|+.|++|+...... .....+ ..|...|.+++|+|++ ++++++.|+.+++|+.........
T Consensus 167 s~s~d~~i~~w~~~~~~~---------~~~~~~-~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~ 236 (345)
T 3fm0_A 167 SASYDDTVKLYREEEDDW---------VCCATL-EGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSG 236 (345)
T ss_dssp EEETTSCEEEEEEETTEE---------EEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC-
T ss_pred EEeCCCcEEEEEecCCCE---------EEEEEe-cCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeec
Confidence 999999999998753211 111222 2478899999999976 688999999999997532211110
Q ss_pred --ccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 234 --PSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 234 --~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
+...........|...|++++|+|++. .+++++.|+.|++|+...
T Consensus 237 ~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~i~vw~~~~ 283 (345)
T 3fm0_A 237 SDPSWKCICTLSGFHSRTIYDIAWCQLTG-ALATACGDDAIRVFQEDP 283 (345)
T ss_dssp --CEEEEEEEECSSCSSCEEEEEECTTTC-CEEEEETTSCEEEEEECT
T ss_pred cCCccceeEEecCCCCCcEEEEEEecCCC-EEEEEeCCCeEEEEEeCC
Confidence 111111122234889999999999876 578999999999999753
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=9.4e-40 Score=266.69 Aligned_cols=244 Identities=19% Similarity=0.334 Sum_probs=202.5
Q ss_pred CccceeEEEEcCC----CCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEec
Q 023500 2 HTRTVRSCAWSPS----GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVM 77 (281)
Q Consensus 2 h~~~i~~~~~~~~----~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~ 77 (281)
|.+.|++++|+|+ +++|+||+.|+.|+||+...........+.+|...|.+++|+|++.++++++.|++|++||+.
T Consensus 31 H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~ 110 (321)
T 3ow8_A 31 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE 110 (321)
T ss_dssp SSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETT
T ss_pred CCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 8899999999985 579999999999999998777666667889999999999999999999999999999999997
Q ss_pred CCCeeEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCE
Q 023500 78 PGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDK 157 (281)
Q Consensus 78 ~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 157 (281)
.+. ++..+..|...+.+++|+|+++++++++.|+.|++|+++... ....+ ..|...|.+++|+|++++
T Consensus 111 ~~~---~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~-----~~~~~----~~~~~~v~~~~~spdg~~ 178 (321)
T 3ow8_A 111 NGK---QIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGK-----KEYSL----DTRGKFILSIAYSPDGKY 178 (321)
T ss_dssp TTE---EEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCS-----EEEEE----ECSSSCEEEEEECTTSSE
T ss_pred CCC---EEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCc-----eeEEe----cCCCceEEEEEECCCCCE
Confidence 654 455677788889999999999999999999999999887643 22222 246678999999999999
Q ss_pred EEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEEecccCCCcCCccc
Q 023500 158 LVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSY 236 (281)
Q Consensus 158 l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~ 236 (281)
|++|+.|+.|++||+...+ ....+ ..|..+|.+++|+|++ ++++++.|+.+++|+....
T Consensus 179 lasg~~dg~i~iwd~~~~~-----------~~~~~-~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~-------- 238 (321)
T 3ow8_A 179 LASGAIDGIINIFDIATGK-----------LLHTL-EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA-------- 238 (321)
T ss_dssp EEEEETTSCEEEEETTTTE-----------EEEEE-CCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC--------
T ss_pred EEEEcCCCeEEEEECCCCc-----------EEEEE-cccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc--------
Confidence 9999999999999986432 12222 2477889999999976 6888999999999977542
Q ss_pred eeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 237 KMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 237 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
.......+|...|++++|+|+++ +|++++.|+.|+|||+..
T Consensus 239 -~~~~~~~~h~~~v~~~~~sp~~~-~l~s~s~D~~v~iwd~~~ 279 (321)
T 3ow8_A 239 -NLAGTLSGHASWVLNVAFCPDDT-HFVSSSSDKSVKVWDVGT 279 (321)
T ss_dssp -CEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTT
T ss_pred -ceeEEEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCC
Confidence 12334568999999999999876 578999999999999864
No 9
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-39 Score=267.06 Aligned_cols=258 Identities=25% Similarity=0.458 Sum_probs=195.4
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeee-cC-CCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCC
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATL-EG-HENEVKSVSWNASGTLLATCGRDKSVWIWEVMPG 79 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~-~~-h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~ 79 (281)
|.+.|++++|+|+ +||+|+.|+.|+||+...+.......+ .+ |.+.|.+++|+|++++|++|+.|++|++|++...
T Consensus 13 h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~ 90 (330)
T 2hes_X 13 YKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEES 90 (330)
T ss_dssp CSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC---
T ss_pred CCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccC
Confidence 8899999999988 999999999999999876544445555 44 9999999999999999999999999999998532
Q ss_pred C----eeEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCC
Q 023500 80 N----EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG 155 (281)
Q Consensus 80 ~----~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 155 (281)
. .......+.+|...|.+++|+|++++|++++.|++|++|++..... ..+++..+ .+|...|.+++|+|++
T Consensus 91 ~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~-~~~~~~~~----~~h~~~v~~v~~~p~~ 165 (330)
T 2hes_X 91 ADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGE-EYECISVL----QEHSQDVKHVIWHPSE 165 (330)
T ss_dssp ----CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCC-CCEEEEEE----CCCSSCEEEEEECSSS
T ss_pred cCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCC-CeEEEEEe----ccCCCceEEEEECCCC
Confidence 1 2345677889999999999999999999999999999999853211 12222222 4789999999999999
Q ss_pred CEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCC--c-eeeecCCCCcEEEEecccCCCcC
Q 023500 156 DKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE--G-IIASGAADDSVQFFVESKDDLID 232 (281)
Q Consensus 156 ~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~-~~~~~~~d~~~~~~~~~~~~~~~ 232 (281)
.+|++|+.|++|++||..... +.....+ ..|...|.++.|+++ + .+++++.|+.+++|+........
T Consensus 166 ~~l~s~s~D~~i~iW~~~~~~---------~~~~~~~-~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~ 235 (330)
T 2hes_X 166 ALLASSSYDDTVRIWKDYDDD---------WECVAVL-NGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDD 235 (330)
T ss_dssp SEEEEEETTSCEEEEEEETTE---------EEEEEEE-CCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTS
T ss_pred CEEEEEcCCCeEEEEECCCCC---------eeEEEEc-cCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccc
Confidence 999999999999999864221 1122222 247889999999986 4 58899999999999875432111
Q ss_pred Cccceeeeeec-cCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 233 GPSYKMLLKKE-KAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 233 ~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
.... ...... ..|...|++++|++++ +|++++.||.|+||++..
T Consensus 236 ~~~~-~~~~~~~~~h~~~v~~v~~s~~~--~l~s~~~dg~v~iw~~~~ 280 (330)
T 2hes_X 236 QQEW-VCEAILPDVHKRQVYNVAWGFNG--LIASVGADGVLAVYEEVD 280 (330)
T ss_dssp CEEE-EEEEECCSCCSSCEEEEEECTTS--CEEEEETTSCEEEEEEET
T ss_pred ccee-EEeeecccccccceEEEEEcCCC--EEEEEeCCCEEEEEEcCC
Confidence 1111 112222 3488999999999754 588999999999999753
No 10
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3.2e-40 Score=278.26 Aligned_cols=241 Identities=32% Similarity=0.539 Sum_probs=202.8
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|.+.|++++|+|++++|++|+.|+.|+|||..+.+ ++..+.+|...|.+++|+|++++|++|+.|++|++||+..+.
T Consensus 149 h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~--~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~- 225 (410)
T 1vyh_C 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE--CIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY- 225 (410)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSC--EEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC-
T ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc--eeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc-
Confidence 78999999999999999999999999999987653 577889999999999999999999999999999999997664
Q ss_pred eEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccC-------
Q 023500 82 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK------- 154 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~------- 154 (281)
++..+.+|...|.++.++|++.++++++.|++|++|++.... +...+ .+|...|.+++|+|+
T Consensus 226 --~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~-----~~~~~----~~h~~~v~~~~~~~~~~~~~~~ 294 (410)
T 1vyh_C 226 --CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE-----CKAEL----REHRHVVECISWAPESSYSSIS 294 (410)
T ss_dssp --EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC-----EEEEE----CCCSSCEEEEEECCSCGGGGGG
T ss_pred --EEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCc-----eeeEe----cCCCceEEEEEEcCcccccchh
Confidence 466788999999999999999999999999999999886542 22222 468899999999996
Q ss_pred -------------CCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcE
Q 023500 155 -------------GDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSV 220 (281)
Q Consensus 155 -------------~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~ 220 (281)
+.+|++|+.|+.|++||+..+. ....+. .|...|.++.|++++ ++++++.|+.+
T Consensus 295 ~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~-----------~~~~~~-~h~~~v~~v~~~~~g~~l~s~s~D~~i 362 (410)
T 1vyh_C 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM-----------CLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTL 362 (410)
T ss_dssp GCCSCC-------CCEEEEEETTSEEEEEETTTTE-----------EEEEEE-CCSSCEEEEEECSSSSCEEEEETTTEE
T ss_pred hhccccccccCCCCCEEEEEeCCCeEEEEECCCCc-----------eEEEEE-CCCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 5689999999999999986432 222332 478899999999876 68899999999
Q ss_pred EEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEcc
Q 023500 221 QFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 278 (281)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~ 278 (281)
++|+.... .......+|...|++++|+|++. +|++|+.||.|+||+++
T Consensus 363 ~vwd~~~~---------~~~~~~~~h~~~v~~l~~~~~~~-~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 363 RVWDYKNK---------RCMKTLNAHEHFVTSLDFHKTAP-YVVTGSVDQTVKVWECR 410 (410)
T ss_dssp EEECCTTS---------CCCEEEECCSSCEEEEEECSSSS-CEEEEETTSEEEEEC--
T ss_pred EEEECCCC---------ceEEEEcCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEeCC
Confidence 99976432 12233457999999999999876 57899999999999863
No 11
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=8.1e-41 Score=272.47 Aligned_cols=255 Identities=26% Similarity=0.395 Sum_probs=199.7
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcC--CCCEEEEecCCCcEEEEEecCC
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEVMPG 79 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~--~~~~l~s~~~d~~v~~w~~~~~ 79 (281)
|.+.|++++|+|+|++||+|+.|++|+|||..++...++..+.+|.+.|++++|+| ++++|++||.|++|++||+..+
T Consensus 12 H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~ 91 (316)
T 3bg1_A 12 HEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENG 91 (316)
T ss_dssp --CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSS
T ss_pred ccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCC
Confidence 88999999999999999999999999999987765556778899999999999976 4899999999999999998754
Q ss_pred CeeEEeEeecCCccceeEEEecCC--CCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccC---
Q 023500 80 NEFECVSVLQGHAQDVKMVQWHPT--MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK--- 154 (281)
Q Consensus 80 ~~~~~~~~~~~~~~~v~~v~~~p~--~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--- 154 (281)
. ......+.+|...|++++|+|+ +.++++++.|++|++|++..... +. ......+|...|.+++|+|+
T Consensus 92 ~-~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~--~~----~~~~~~~h~~~v~~~~~~~~~~~ 164 (316)
T 3bg1_A 92 T-WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQ--WE----VKKINNAHTIGCNAVSWAPAVVP 164 (316)
T ss_dssp C-CCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSC--EE----ECCBTTSSSSCBCCCEECCCCCC
T ss_pred c-ceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCC--cc----eeeeeccccCCcceEEEccccCC
Confidence 3 2345567889999999999998 77999999999999998865321 11 11223478889999999997
Q ss_pred --------------CCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCC-----ceeeecC
Q 023500 155 --------------GDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE-----GIIASGA 215 (281)
Q Consensus 155 --------------~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~~~~~ 215 (281)
+.+|++|+.|++|++||.+.... +.....+ ..|...|.+++|+|+ .++++++
T Consensus 165 ~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~--------~~~~~~l-~~h~~~V~~v~~sp~~~~~~~~las~s 235 (316)
T 3bg1_A 165 GSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQ--------WKEEQKL-EAHSDWVRDVAWAPSIGLPTSTIASCS 235 (316)
T ss_dssp ------CCSCCCCCCCBEECCBTTSBCCEEEECTTSC--------EEEEECC-BCCSSCEEEEECCCCSSCSCCEEEEEE
T ss_pred ccccccccccCccccceEEEecCCCeEEEEEeCCCCc--------cceeeec-ccCCCceEEEEecCCCCCCCceEEEEc
Confidence 36899999999999998752210 1112222 247889999999987 4799999
Q ss_pred CCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEcc
Q 023500 216 ADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 278 (281)
Q Consensus 216 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~ 278 (281)
.|+.+++|+...... .... ......|...|++++|+|+++ +|++++.|+.|+||+..
T Consensus 236 ~D~~v~iw~~~~~~~--~~~~---~~~~~~~~~~v~~v~~sp~g~-~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 236 QDGRVFIWTCDDASS--NTWS---PKLLHKFNDVVWHVSWSITAN-ILAVSGGDNKVTLWKES 292 (316)
T ss_dssp TTCEEEEEECSSTTC--CCCB---CCEEEECSSCEEEEEECTTTC-CEEEEESSSCEEEEEEC
T ss_pred CCCeEEEEEccCccc--cchh---hhhhhcCCCcEEEEEEcCCCC-EEEEEcCCCeEEEEEEC
Confidence 999999997753110 0000 111235788999999999875 68899999999999975
No 12
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2e-39 Score=266.88 Aligned_cols=243 Identities=25% Similarity=0.363 Sum_probs=195.1
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|...|++++|+|++++|++|+.|+.|+|||..++. .+..+..|...|.+++|+|++++|++|+.|+.+++|++.....
T Consensus 54 H~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~ 131 (340)
T 1got_B 54 HLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTN--KVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREG 131 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCC--EEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSB
T ss_pred CCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCC--cceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCC
Confidence 78999999999999999999999999999987664 3566778888999999999999999988888888888653210
Q ss_pred ------------------------------------------eEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEE
Q 023500 82 ------------------------------------------FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 119 (281)
Q Consensus 82 ------------------------------------------~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w 119 (281)
..++..+.+|...|.+++|+|++.++++++.|++|++|
T Consensus 132 ~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~w 211 (340)
T 1got_B 132 NVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLW 211 (340)
T ss_dssp SCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred cceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEE
Confidence 01233466799999999999999999999999999999
Q ss_pred eCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEee-cccCc
Q 023500 120 WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTIS-GYHDR 198 (281)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 198 (281)
++.... +...+ .+|...|.+++|+|++.+|++|+.|++|++||++..+. ...+. ..+..
T Consensus 212 d~~~~~-----~~~~~----~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~-----------~~~~~~~~~~~ 271 (340)
T 1got_B 212 DVREGM-----CRQTF----TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE-----------LMTYSHDNIIC 271 (340)
T ss_dssp ETTTCS-----EEEEE----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-----------EEEECCTTCCS
T ss_pred ECCCCe-----eEEEE----cCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcE-----------EEEEccCCccc
Confidence 887542 22323 47889999999999999999999999999999864321 11111 11234
Q ss_pred ceEEEEeCCCc-eeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEE
Q 023500 199 TIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 276 (281)
Q Consensus 199 ~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~ 276 (281)
.+.+++|+|++ ++++++.|+.+++|+.... .......+|..+|++++|+|++. +|++|+.|+.|+|||
T Consensus 272 ~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~---------~~~~~~~~h~~~v~~~~~s~dg~-~l~s~s~D~~i~iWd 340 (340)
T 1got_B 272 GITSVSFSKSGRLLLAGYDDFNCNVWDALKA---------DRAGVLAGHDNRVSCLGVTDDGM-AVATGSWDSFLKIWN 340 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTC---------CEEEEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEEC
T ss_pred ceEEEEECCCCCEEEEECCCCeEEEEEcccC---------cEeeEeecCCCcEEEEEEcCCCC-EEEEEcCCccEEecC
Confidence 68999999976 6888899999999976532 12334568999999999999875 588999999999996
No 13
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.2e-39 Score=264.49 Aligned_cols=241 Identities=22% Similarity=0.297 Sum_probs=203.4
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|...|.+++|+|+++++++|+.|+.|+|||..+++ ++..+.+|...+.+++|+|++++|++|+.|+.|++|++..+..
T Consensus 79 h~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~--~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~ 156 (321)
T 3ow8_A 79 HQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGK--QIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK 156 (321)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE--EEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSE
T ss_pred CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCC--EEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCce
Confidence 78899999999999999999999999999987764 4667788999999999999999999999999999999976653
Q ss_pred eEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEe
Q 023500 82 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 161 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 161 (281)
...+..|...+.+++|+|+++++++++.|+.|++|+++... .+..+ .+|...|.+++|+|++++|++|
T Consensus 157 ---~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~-----~~~~~----~~h~~~v~~l~~spd~~~l~s~ 224 (321)
T 3ow8_A 157 ---EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK-----LLHTL----EGHAMPIRSLTFSPDSQLLVTA 224 (321)
T ss_dssp ---EEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-----EEEEE----CCCSSCCCEEEECTTSCEEEEE
T ss_pred ---eEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCc-----EEEEE----cccCCceeEEEEcCCCCEEEEE
Confidence 45567788889999999999999999999999999886542 23333 4788999999999999999999
Q ss_pred eCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEEecccCCCcCCccceeee
Q 023500 162 SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLL 240 (281)
Q Consensus 162 ~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 240 (281)
+.|+.|++||++... ....+ ..|...|.+++|+|++ ++++++.|+.+++|+.... ...
T Consensus 225 s~dg~i~iwd~~~~~-----------~~~~~-~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~---------~~~ 283 (321)
T 3ow8_A 225 SDDGYIKIYDVQHAN-----------LAGTL-SGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR---------TCV 283 (321)
T ss_dssp CTTSCEEEEETTTCC-----------EEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT---------EEE
T ss_pred cCCCeEEEEECCCcc-----------eeEEE-cCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC---------EEE
Confidence 999999999986432 12222 2478889999999876 6889999999999977532 233
Q ss_pred eeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEcc
Q 023500 241 KKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 278 (281)
Q Consensus 241 ~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~ 278 (281)
.....|...|++++|+|++. +|++++.||.|+|||..
T Consensus 284 ~~~~~h~~~v~~v~~s~~g~-~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 284 HTFFDHQDQVWGVKYNGNGS-KIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEECCCSSCEEEEEECTTSS-EEEEEETTCCEEEEECC
T ss_pred EEEcCCCCcEEEEEECCCCC-EEEEEeCCCeEEEEeCC
Confidence 44567999999999999876 57899999999999964
No 14
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.9e-39 Score=265.94 Aligned_cols=242 Identities=22% Similarity=0.375 Sum_probs=194.3
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCcee-------------------------------------------
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYE------------------------------------------- 38 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~------------------------------------------- 38 (281)
|.+.|++++|+|++++||||+.|+.|+|||..+....
T Consensus 63 H~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~ 142 (354)
T 2pbi_B 63 HGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNEN 142 (354)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCC
T ss_pred CCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEecccccc
Confidence 8889999999999999999999999999996543321
Q ss_pred ---eeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEEeEeecCCccceeEEEecCC--CCeEEEEecC
Q 023500 39 ---CVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT--MDVLFSCSYD 113 (281)
Q Consensus 39 ---~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~--~~~l~s~s~d 113 (281)
....+.+|.+.|.+++|+|++..|++++.|++|++||+..+. ++..+.+|...|.++.|+|+ ++++++|+.|
T Consensus 143 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~---~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~D 219 (354)
T 2pbi_B 143 MAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQ---LLQSFHGHGADVLCLDLAPSETGNTFVSGGCD 219 (354)
T ss_dssp SGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC---EEEEEECCSSCEEEEEECCCSSCCEEEEEETT
T ss_pred ccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCe---EEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCC
Confidence 123345688899999999999999999999999999997664 45678899999999999884 6799999999
Q ss_pred CeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEee
Q 023500 114 NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTIS 193 (281)
Q Consensus 114 ~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~ 193 (281)
++|++||+.... ++..+ .+|...|.+++|+|++.+|++|+.|++|++||+..... ...+.
T Consensus 220 g~v~~wd~~~~~-----~~~~~----~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~-----------~~~~~ 279 (354)
T 2pbi_B 220 KKAMVWDMRSGQ-----CVQAF----ETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADRE-----------VAIYS 279 (354)
T ss_dssp SCEEEEETTTCC-----EEEEE----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-----------EEEEC
T ss_pred CeEEEEECCCCc-----EEEEe----cCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE-----------EEEEc
Confidence 999999987542 33333 47889999999999999999999999999999864321 11111
Q ss_pred c-ccCcceEEEEeCCCc-eeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCe
Q 023500 194 G-YHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGM 271 (281)
Q Consensus 194 ~-~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~ 271 (281)
. .+...+.++.|++++ ++++++.|+.+++|+..... ......+|..+|++++|+|+++ +|++|+.|+.
T Consensus 280 ~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~---------~~~~l~~h~~~v~~l~~spdg~-~l~sgs~D~~ 349 (354)
T 2pbi_B 280 KESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGS---------RVSILFGHENRVSTLRVSPDGT-AFCSGSWDHT 349 (354)
T ss_dssp CTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS---------EEEEECCCSSCEEEEEECTTSS-CEEEEETTSE
T ss_pred CCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCc---------eEEEEECCCCcEEEEEECCCCC-EEEEEcCCCC
Confidence 1 123467889999876 67888899999999775421 2234468999999999999886 5889999999
Q ss_pred EEEEE
Q 023500 272 IKIWE 276 (281)
Q Consensus 272 v~iw~ 276 (281)
|+||+
T Consensus 350 v~vW~ 354 (354)
T 2pbi_B 350 LRVWA 354 (354)
T ss_dssp EEEEC
T ss_pred EEecC
Confidence 99996
No 15
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.7e-39 Score=263.80 Aligned_cols=248 Identities=23% Similarity=0.446 Sum_probs=197.6
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|...|++++|+|+|++|++|+.|+.|+|||..+++ ++..+.+|...|.+++|+|++.+|++|+.|++|++||+..
T Consensus 64 h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~--- 138 (319)
T 3frx_A 64 HSHIVQDCTLTADGAYALSASWDKTLRLWDVATGE--TYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG--- 138 (319)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE--EEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS---
T ss_pred CcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCC--eeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC---
Confidence 78899999999999999999999999999988774 5678899999999999999999999999999999999853
Q ss_pred eEEeEeecCCccceeEEEecCCC------CeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCC
Q 023500 82 FECVSVLQGHAQDVKMVQWHPTM------DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG 155 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~v~~~p~~------~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 155 (281)
.++..+.+|...|.++.|+|.. ..+++++.|++|++|++.... .... ..+|...|.+++|+|++
T Consensus 139 -~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~-----~~~~----~~~h~~~v~~~~~sp~g 208 (319)
T 3frx_A 139 -QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ-----IEAD----FIGHNSNINTLTASPDG 208 (319)
T ss_dssp -CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE-----EEEE----ECCCCSCEEEEEECTTS
T ss_pred -CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch-----hhee----ecCCCCcEEEEEEcCCC
Confidence 2456778999999999999954 489999999999999886532 2222 24799999999999999
Q ss_pred CEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecCCCCcEEEEecccCCCcCCcc
Q 023500 156 DKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPS 235 (281)
Q Consensus 156 ~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 235 (281)
++|++|+.|++|++||+...+ ....+. +...+.+++|+|++.+++++.+..+++|+...........
T Consensus 209 ~~l~s~~~dg~i~iwd~~~~~-----------~~~~~~--~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~ 275 (319)
T 3frx_A 209 TLIASAGKDGEIMLWNLAAKK-----------AMYTLS--AQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLR 275 (319)
T ss_dssp SEEEEEETTCEEEEEETTTTE-----------EEEEEE--CCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEEC
T ss_pred CEEEEEeCCCeEEEEECCCCc-----------EEEEec--CCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccC
Confidence 999999999999999986432 122222 3467999999999987777777789999765321110000
Q ss_pred ceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 236 YKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 236 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
.........|...+.+++|+|+++ +|++|+.||.|+|||+..
T Consensus 276 -~~~~~~~~~~~~~v~~~~~spdg~-~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 276 -PEFAGYSKAAEPHAVSLAWSADGQ-TLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp -CCCTTCCGGGCCCEEEEEECTTSS-EEEEEETTSCEEEEEEEE
T ss_pred -ccccccccCcCcceeEEEECCCCC-EEEEeecCceEEEEEEee
Confidence 000011234567799999999986 578999999999999865
No 16
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=7.3e-39 Score=265.18 Aligned_cols=245 Identities=20% Similarity=0.292 Sum_probs=189.0
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeee--eeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCC
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECV--ATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPG 79 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~--~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~ 79 (281)
|...|++++|+|+++++ +++.|+.|+|||..+++.... ....+|...|++++|+|++++|++|+.|++|++||+..+
T Consensus 93 ~~~~V~~~~~s~d~~~l-~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~ 171 (357)
T 4g56_B 93 TEAGVTDVAWVSEKGIL-VASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQK 171 (357)
T ss_dssp CSSCEEEEEEETTTEEE-EEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTT
T ss_pred CCCCEEEEEEcCCCCEE-EEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC
Confidence 66789999999998765 678899999999876543222 234589999999999999999999999999999998755
Q ss_pred CeeEEeEeecCCccceeEEEecCCCC-eEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCC-CE
Q 023500 80 NEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG-DK 157 (281)
Q Consensus 80 ~~~~~~~~~~~~~~~v~~v~~~p~~~-~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~ 157 (281)
+++..+.+|...|++++|+|++. ++++++.|++|++||++.... ...+ ....|...+.+++|+|++ .+
T Consensus 172 ---~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~-----~~~~--~~~~~~~~v~~v~~sp~~~~~ 241 (357)
T 4g56_B 172 ---AVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKP-----ATRI--DFCASDTIPTSVTWHPEKDDT 241 (357)
T ss_dssp ---EEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSC-----BCBC--CCTTCCSCEEEEEECTTSTTE
T ss_pred ---cEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCce-----eeee--eeccccccccchhhhhcccce
Confidence 35677889999999999999875 789999999999998875431 1111 123466789999999974 68
Q ss_pred EEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc--eeeecCCCCcEEEEecccCCCcCCcc
Q 023500 158 LVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGAADDSVQFFVESKDDLIDGPS 235 (281)
Q Consensus 158 l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~ 235 (281)
|++|+.|+.|++||++..+. ...+ ..+...|.+++|+|++ ++++++.|+.+++|+....
T Consensus 242 la~g~~d~~i~~wd~~~~~~-----------~~~~-~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~------- 302 (357)
T 4g56_B 242 FACGDETGNVSLVNIKNPDS-----------AQTS-AVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS------- 302 (357)
T ss_dssp EEEEESSSCEEEEESSCGGG-----------CEEE-CCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC-------
T ss_pred EEEeecccceeEEECCCCcE-----------eEEE-eccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC-------
Confidence 89999999999999864322 1122 2467889999999865 6889999999999976432
Q ss_pred ceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 236 YKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 236 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
..+ ...+|...|++++|+|.+..+|+|++.||.|++|++..
T Consensus 303 --~~~-~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 303 --EVF-RDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp --EEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred --cEe-EECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 122 23479999999999995445789999999999999865
No 17
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=8.1e-39 Score=263.52 Aligned_cols=252 Identities=19% Similarity=0.302 Sum_probs=195.4
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|...|++++|+|+++++++|+.|+.|+|||..+++ ++..+.+|...|.+++|+|++++|++++.|++|++||+... .
T Consensus 75 h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~--~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~ 151 (343)
T 2xzm_R 75 HNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGT--TYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-C 151 (343)
T ss_dssp CSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSC--EEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-E
T ss_pred CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc--EEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-c
Confidence 78899999999999999999999999999987764 46788899999999999999999999999999999998632 1
Q ss_pred eEEeEeecCCccceeEEEecCCC----------CeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEE
Q 023500 82 FECVSVLQGHAQDVKMVQWHPTM----------DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSF 151 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~v~~~p~~----------~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 151 (281)
........+|...|.+++|+|++ .++++++.|++|++|+... .....+ .+|...|.+++|
T Consensus 152 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~------~~~~~~----~~h~~~v~~~~~ 221 (343)
T 2xzm_R 152 KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF------QIRYTF----KAHESNVNHLSI 221 (343)
T ss_dssp EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT------EEEEEE----ECCSSCEEEEEE
T ss_pred eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC------ceeEEE----cCccccceEEEE
Confidence 11112223788899999999986 6899999999999998321 122222 378899999999
Q ss_pred ccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecCCCCcEEEEecccCCCc
Q 023500 152 NAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLI 231 (281)
Q Consensus 152 ~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 231 (281)
+|++++|++|+.|+.|++||+..... ....+ .+...+.+++|+|++.+++++.|+.+++|+.......
T Consensus 222 s~~g~~l~sgs~dg~v~iwd~~~~~~----------~~~~~--~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~ 289 (343)
T 2xzm_R 222 SPNGKYIATGGKDKKLLIWDILNLTY----------PQREF--DAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKA 289 (343)
T ss_dssp CTTSSEEEEEETTCEEEEEESSCCSS----------CSEEE--ECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSC
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCcc----------cceee--cCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCC
Confidence 99999999999999999999742110 01111 1345689999999998888888999999987543211
Q ss_pred CCccce----eeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 232 DGPSYK----MLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 232 ~~~~~~----~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
...... .......+|...|++++|+|+++ +|++|+.||.|++|++..
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~-~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 290 PVCTIEAEPITKAEGQKGKNPQCTSLAWNALGK-KLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp SEEECCCCSGGGBTTBCCSCCCEEEEEECSSSC-CEEEEETTSEEEEEEEEE
T ss_pred ceEEeecCcchhhhhhcCCCCceEEEEECCCCC-eEEEecCCceEEEEEEEc
Confidence 100000 00011236888899999999886 578999999999999864
No 18
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4.2e-39 Score=265.05 Aligned_cols=248 Identities=18% Similarity=0.250 Sum_probs=188.4
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCC---------CceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEE
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVG---------GDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVW 72 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~---------~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~ 72 (281)
|...|.+++|+|||++|++++ |+++++||... ...........|...|.+++|+|++ .|++|+.|++|+
T Consensus 29 ~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v~ 106 (344)
T 4gqb_B 29 MERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAVE 106 (344)
T ss_dssp CCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEEE
T ss_pred ccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEEE
Confidence 557799999999999999887 66777775211 0001111222466789999999984 788999999999
Q ss_pred EEEecCCCeeE-EeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEE
Q 023500 73 IWEVMPGNEFE-CVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSF 151 (281)
Q Consensus 73 ~w~~~~~~~~~-~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 151 (281)
+||+..++... ......+|...|++++|+|++++|++|+.|++|++|++++. +++..+ .+|...|.+++|
T Consensus 107 lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~-----~~~~~~----~~h~~~V~~~~~ 177 (344)
T 4gqb_B 107 LWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQ-----VVLSSY----RAHAAQVTCVAA 177 (344)
T ss_dssp EEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-----EEEEEE----CCCSSCEEEEEE
T ss_pred EEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC-----cEEEEE----cCcCCceEEEEe
Confidence 99998765432 23345689999999999999999999999999999988754 233333 479999999999
Q ss_pred ccCCC-EEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCC--ceeeecCCCCcEEEEecccC
Q 023500 152 NAKGD-KLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE--GIIASGAADDSVQFFVESKD 228 (281)
Q Consensus 152 ~~~~~-~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~d~~~~~~~~~~~ 228 (281)
+|++. +|++|+.|++|++||++..+.... + ....+...+.++.|+++ .++++++.|+.+++|+....
T Consensus 178 ~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~--------~--~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~ 247 (344)
T 4gqb_B 178 SPHKDSVFLSCSEDNRILLWDTRCPKPASQ--------I--GCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKST 247 (344)
T ss_dssp CSSCTTEEEEEETTSCEEEEETTSSSCEEE--------C--C----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC-
T ss_pred cCCCCCceeeeccccccccccccccceeee--------e--ecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCC
Confidence 99874 789999999999999875432110 0 01124556788999874 36788999999999977542
Q ss_pred CCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 229 DLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 229 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
. .+....+|...|++++|+|++..+|++|+.|+.|+|||+..
T Consensus 248 ~---------~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~ 289 (344)
T 4gqb_B 248 S---------CVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSL 289 (344)
T ss_dssp ----------CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTC
T ss_pred c---------EEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCC
Confidence 1 22345689999999999999877899999999999999864
No 19
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.8e-38 Score=260.32 Aligned_cols=255 Identities=20% Similarity=0.356 Sum_probs=189.2
Q ss_pred CccceeEEEEcCC-CCEEEEeeCCCcEEEEecCCCc---eeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEec
Q 023500 2 HTRTVRSCAWSPS-GKLLATASFDATTCIWEDVGGD---YECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVM 77 (281)
Q Consensus 2 h~~~i~~~~~~~~-~~~l~tg~~d~~i~lw~~~~~~---~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~ 77 (281)
|++.|++++|+|+ +++||||+.|++|+|||....+ ..+...+.+|...|.+++|+|++++|++++.|+.|++|+..
T Consensus 37 H~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~ 116 (340)
T 4aow_A 37 HNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLT 116 (340)
T ss_dssp CSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred ccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeec
Confidence 8899999999997 6899999999999999976543 23567789999999999999999999999999999999876
Q ss_pred CCCeeEE----------------------------------------eEeecCCccceeEEEecCCC--CeEEEEecCCe
Q 023500 78 PGNEFEC----------------------------------------VSVLQGHAQDVKMVQWHPTM--DVLFSCSYDNT 115 (281)
Q Consensus 78 ~~~~~~~----------------------------------------~~~~~~~~~~v~~v~~~p~~--~~l~s~s~d~~ 115 (281)
....... .....+|...+..++|+++. .++++++.|+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~ 196 (340)
T 4aow_A 117 TGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKL 196 (340)
T ss_dssp TTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSC
T ss_pred ccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCE
Confidence 4321110 11123456666677776653 35667777777
Q ss_pred EEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecc
Q 023500 116 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGY 195 (281)
Q Consensus 116 v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (281)
|++|++.... .+.. ..+|...|.+++|+|++++|++|+.|+.|++||+...+ ....+.
T Consensus 197 i~i~d~~~~~-----~~~~----~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~-----------~~~~~~-- 254 (340)
T 4aow_A 197 VKVWNLANCK-----LKTN----HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK-----------HLYTLD-- 254 (340)
T ss_dssp EEEEETTTTE-----EEEE----ECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE-----------EEEEEE--
T ss_pred EEEEECCCCc-----eeeE----ecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCc-----------eeeeec--
Confidence 7777665431 2222 24788999999999999999999999999999986432 222222
Q ss_pred cCcceEEEEeCCCceeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEE
Q 023500 196 HDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 275 (281)
Q Consensus 196 ~~~~v~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw 275 (281)
+...+.++.+++++.+++++.|+.+++|+.....................|...|++++|+|+++ +|++|+.||.|+||
T Consensus 255 ~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~-~l~sgs~Dg~v~iW 333 (340)
T 4aow_A 255 GGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQ-TLFAGYTDNLVRVW 333 (340)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSS-EEEEEETTSCEEEE
T ss_pred CCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCC-EEEEEeCCCEEEEE
Confidence 45678999999999999999999999998754322111111111223457889999999999876 57899999999999
Q ss_pred Eccc
Q 023500 276 ELAN 279 (281)
Q Consensus 276 ~~~~ 279 (281)
|+..
T Consensus 334 ~~~t 337 (340)
T 4aow_A 334 QVTI 337 (340)
T ss_dssp EEEC
T ss_pred eCCC
Confidence 9875
No 20
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.2e-38 Score=264.47 Aligned_cols=257 Identities=21% Similarity=0.316 Sum_probs=190.0
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCC-
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN- 80 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~- 80 (281)
|.+.|++++|+|++++||+|+.|+.|+|||..+++ ....+.+|...|.+++|+|+|++|++|+.|+.+++|++....
T Consensus 65 H~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~--~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~ 142 (380)
T 3iz6_a 65 HSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQ--KTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQAD 142 (380)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTE--EEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSS
T ss_pred cccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--cceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCcc
Confidence 88999999999999999999999999999987664 456677788888888888888777777777777777753210
Q ss_pred ---------------------------e--e-----------------EEeEee-----cCCccceeEEEecC-CCCeEE
Q 023500 81 ---------------------------E--F-----------------ECVSVL-----QGHAQDVKMVQWHP-TMDVLF 108 (281)
Q Consensus 81 ---------------------------~--~-----------------~~~~~~-----~~~~~~v~~v~~~p-~~~~l~ 108 (281)
. . +++..+ .+|...|.++.|+| ++++++
T Consensus 143 ~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 222 (380)
T 3iz6_a 143 RDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFI 222 (380)
T ss_dssp CCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEE
T ss_pred ccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEE
Confidence 0 0 011122 46888899999987 788999
Q ss_pred EEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccce
Q 023500 109 SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRH 188 (281)
Q Consensus 109 s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~ 188 (281)
+|+.|++|++||+.... ..+..+ .+|...|.+++|+|++.+|++|+.|++|++||+...........
T Consensus 223 sgs~D~~v~~wd~~~~~----~~~~~~----~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~----- 289 (380)
T 3iz6_a 223 SGSCDTTVRLWDLRITS----RAVRTY----HGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNR----- 289 (380)
T ss_dssp EEETTSCEEEEETTTTC----CCCEEE----CCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECC-----
T ss_pred EEECCCeEEEEECCCCC----cceEEE----CCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecc-----
Confidence 99999999999986432 122222 47999999999999999999999999999999875432110000
Q ss_pred eEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeC
Q 023500 189 LCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASAS 267 (281)
Q Consensus 189 ~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~ 267 (281)
.......+...+.+++|++++ ++++++.|+.+++|+..... ....+.....+|...|++++|+|++. +|++|+
T Consensus 290 ~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~-----~~~~~~~~~~~h~~~v~~l~~s~dg~-~l~sgs 363 (380)
T 3iz6_a 290 EPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAE-----MVLNLGTLQNSHEGRISCLGLSSDGS-ALCTGS 363 (380)
T ss_dssp CCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCC-----EEEEECCSCSSCCCCCCEEEECSSSS-EEEEEC
T ss_pred cccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCc-----eEEEEecccCCCCCceEEEEECCCCC-EEEEee
Confidence 000000122347889999876 67888899999999764321 11111122357999999999999886 688999
Q ss_pred CCCeEEEEEccc
Q 023500 268 DDGMIKIWELAN 279 (281)
Q Consensus 268 ~Dg~v~iw~~~~ 279 (281)
.|+.|+||++..
T Consensus 364 ~D~~i~iW~~~~ 375 (380)
T 3iz6_a 364 WDKNLKIWAFSG 375 (380)
T ss_dssp TTSCEEEEECCS
T ss_pred CCCCEEEEecCC
Confidence 999999999875
No 21
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=5.1e-39 Score=266.11 Aligned_cols=249 Identities=19% Similarity=0.264 Sum_probs=188.8
Q ss_pred CccceeEEEEcCCCCEEEEeeC------CCcEEEEecCCCce--eeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEE
Q 023500 2 HTRTVRSCAWSPSGKLLATASF------DATTCIWEDVGGDY--ECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWI 73 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~------d~~i~lw~~~~~~~--~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~ 73 (281)
|.+.|++++|+|||++||+|+. |+.+++|+..++.. .......+|...|.+++|+|++. +++++.|++|++
T Consensus 41 H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~l 119 (357)
T 4g56_B 41 MEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVEL 119 (357)
T ss_dssp CCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEE
T ss_pred ccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEE
Confidence 8899999999999999999997 77899998655431 12234456899999999999875 556788999999
Q ss_pred EEecCCCeeE-EeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEc
Q 023500 74 WEVMPGNEFE-CVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFN 152 (281)
Q Consensus 74 w~~~~~~~~~-~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 152 (281)
||+..++... ......+|...|++++|+|++++|++++.|++|++|+++... ++..+ .+|...|.+++|+
T Consensus 120 Wd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~-----~~~~~----~~h~~~v~~v~~s 190 (357)
T 4g56_B 120 WEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKA-----VLKSY----NAHSSEVNCVAAC 190 (357)
T ss_dssp C--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTE-----EEEEE----CCCSSCEEEEEEC
T ss_pred eeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc-----EEEEE----cCCCCCEEEEEEc
Confidence 9997654321 123445899999999999999999999999999999887542 23333 4789999999999
Q ss_pred cCCC-EEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCC--ceeeecCCCCcEEEEecccCC
Q 023500 153 AKGD-KLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE--GIIASGAADDSVQFFVESKDD 229 (281)
Q Consensus 153 ~~~~-~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~ 229 (281)
|++. ++++++.|+.|++||++..++.... ....+...+.++.|+|+ .++++++.|+.+++|+.....
T Consensus 191 ~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~----------~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~ 260 (357)
T 4g56_B 191 PGKDTIFLSCGEDGRILLWDTRKPKPATRI----------DFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPD 260 (357)
T ss_dssp TTCSSCEEEEETTSCEEECCTTSSSCBCBC----------CCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGG
T ss_pred cCCCceeeeeccCCceEEEECCCCceeeee----------eeccccccccchhhhhcccceEEEeecccceeEEECCCCc
Confidence 9875 7899999999999998654322111 01134567889999985 368888999999999775421
Q ss_pred CcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 230 LIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 230 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
.......|...|++++|+|++.++|++|+.|+.|+|||+..
T Consensus 261 ---------~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~ 301 (357)
T 4g56_B 261 ---------SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADF 301 (357)
T ss_dssp ---------GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTS
T ss_pred ---------EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC
Confidence 12334578899999999999877899999999999999864
No 22
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=9.3e-38 Score=261.81 Aligned_cols=254 Identities=29% Similarity=0.446 Sum_probs=194.9
Q ss_pred ceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEE
Q 023500 5 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFEC 84 (281)
Q Consensus 5 ~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~ 84 (281)
.|++++|+|+|++||+|+.|+.|+|||..+++ .+..+.+|...|.+++|+|++.+|++++.|++|++||+..+. +
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~---~ 199 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRK--IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ---C 199 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE---E
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCc--EEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCe---e
Confidence 48999999999999999999999999987764 467788999999999999999999999999999999997654 2
Q ss_pred eEeecCCccceeEEEecC-CCCeEEEEecCCeEEEEeCCCCCCCCceeeeeee---eccCCccccEEEEEEccCCCEEEE
Q 023500 85 VSVLQGHAQDVKMVQWHP-TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTIS---ESNNGHSSTIWALSFNAKGDKLVS 160 (281)
Q Consensus 85 ~~~~~~~~~~v~~v~~~p-~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~---~~~~~h~~~v~~~~~~~~~~~l~s 160 (281)
...+. +...+.+++|+| ++.++++++.|++|++|+++... .+..+. ....+|...|.+++|+|++++|++
T Consensus 200 ~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~-----~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s 273 (393)
T 1erj_A 200 SLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGF-----LVERLDSENESGTGHKDSVYSVVFTRDGQSVVS 273 (393)
T ss_dssp EEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCC-----EEEEEC------CCCSSCEEEEEECTTSSEEEE
T ss_pred EEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCc-----EEEeecccccCCCCCCCCEEEEEECCCCCEEEE
Confidence 33333 456799999999 88999999999999999886542 222221 122478999999999999999999
Q ss_pred eeCCCcEEEEeCCccccccCCCC-cccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEEecccCCCcCCcccee
Q 023500 161 CSDDLTIKIWGADITRMQSGDGY-ASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKM 238 (281)
Q Consensus 161 ~~~d~~i~~w~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 238 (281)
|+.|+.|++||+........... ........+ ..|...|.++++++++ ++++++.|+.+++|+.....
T Consensus 274 ~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~--------- 343 (393)
T 1erj_A 274 GSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTY-IGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN--------- 343 (393)
T ss_dssp EETTSEEEEEEC---------------CEEEEE-ECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC---------
T ss_pred EeCCCEEEEEECCCCCCcccccCCCCCcceEEE-ecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCe---------
Confidence 99999999999864322111000 000111222 2477889999999876 68899999999999765421
Q ss_pred eeeeccCCCCCeeEEEEcCC-----CCeeEEEeCCCCeEEEEEccc
Q 023500 239 LLKKEKAHDMDVNSVQWSPG-----ERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 239 ~~~~~~~h~~~v~~~~~~~~-----~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
......+|...|++++|++. ...+|++|+.||.|+||++..
T Consensus 344 ~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 344 PLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp EEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred EEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 22344689999999999873 235789999999999999865
No 23
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.3e-37 Score=251.39 Aligned_cols=245 Identities=29% Similarity=0.544 Sum_probs=196.8
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|.+.|++++|+|++++||+|+.|+.|++|+..+++ ....+.+|...|.+++|+|++++|++++.|+.|++||+..+.
T Consensus 22 h~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~- 98 (312)
T 4ery_A 22 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK- 98 (312)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC-
T ss_pred cCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc--cchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCc-
Confidence 78999999999999999999999999999987765 356778999999999999999999999999999999997654
Q ss_pred eEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEe
Q 023500 82 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 161 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 161 (281)
++..+.+|...|.++.|+|+++++++++.|++|++|+++... ++..+ ..|...|.+++|+|++.+|+++
T Consensus 99 --~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~-----~~~~~----~~~~~~v~~~~~~~~~~~l~~~ 167 (312)
T 4ery_A 99 --CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK-----CLKTL----PAHSDPVSAVHFNRDGSLIVSS 167 (312)
T ss_dssp --EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC-----EEEEE----CCCSSCEEEEEECTTSSEEEEE
T ss_pred --EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCE-----EEEEe----cCCCCcEEEEEEcCCCCEEEEE
Confidence 456778899999999999999999999999999999887542 23323 3688899999999999999999
Q ss_pred eCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEEecccCCCcCCccceeee
Q 023500 162 SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLL 240 (281)
Q Consensus 162 ~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 240 (281)
+.|+.|++||+...+. ...+...+..++..+.|+|++ ++++++.|+.+++|+.... ...
T Consensus 168 ~~d~~i~~wd~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~---------~~~ 227 (312)
T 4ery_A 168 SYDGLCRIWDTASGQC-----------LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG---------KCL 227 (312)
T ss_dssp ETTSCEEEEETTTCCE-----------EEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTT---------EEE
T ss_pred eCCCcEEEEECCCCce-----------eeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC---------cEE
Confidence 9999999999864321 122222345678889999876 6888889999999977542 122
Q ss_pred eeccCCCCCee--EEEEcCCCCeeEEEeCCCCeEEEEEcccC
Q 023500 241 KKEKAHDMDVN--SVQWSPGERRLLASASDDGMIKIWELANT 280 (281)
Q Consensus 241 ~~~~~h~~~v~--~~~~~~~~~~~~~s~~~Dg~v~iw~~~~~ 280 (281)
.....|...+. ...+++.+..++++|+.||.|++||+...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~ 269 (312)
T 4ery_A 228 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTK 269 (312)
T ss_dssp EEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTC
T ss_pred EEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCc
Confidence 23334544332 23455444557889999999999998653
No 24
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.9e-37 Score=251.16 Aligned_cols=244 Identities=20% Similarity=0.291 Sum_probs=196.5
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|...|.+++|+|++++|++|+.|+.|++||..+++ ++..+.+|.+.|.+++|+|++.+|++|+.|++|++||+..+..
T Consensus 54 ~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~ 131 (304)
T 2ynn_A 54 TETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE--KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA 131 (304)
T ss_dssp CSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTE
T ss_pred cCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCc--EEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcc
Confidence 67889999999999999999999999999987764 4678889999999999999999999999999999999976543
Q ss_pred eEEeEeecCCccceeEEEecC-CCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEcc--CCCEE
Q 023500 82 FECVSVLQGHAQDVKMVQWHP-TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNA--KGDKL 158 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~v~~~p-~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l 158 (281)
....+.+|...|.+++|+| ++..+++|+.|++|++|++..... ...+ ..+|...+..++|+| ++.+|
T Consensus 132 --~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~-----~~~~---~~~~~~~v~~~~~~~~~~~~~l 201 (304)
T 2ynn_A 132 --LEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP-----NFTL---TTGQERGVNYVDYYPLPDKPYM 201 (304)
T ss_dssp --EEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSC-----SEEE---ECCCTTCEEEEEECCSTTCCEE
T ss_pred --hhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCc-----ccee---ccCCcCcEEEEEEEEcCCCCEE
Confidence 3566789999999999999 568999999999999999865421 1112 135667789999987 66799
Q ss_pred EEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEEecccCCCcCCccce
Q 023500 159 VSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYK 237 (281)
Q Consensus 159 ~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 237 (281)
++|+.|++|++||++... ....+. .|...+.++.|+|++ ++++++.|+.+++|+....
T Consensus 202 ~s~s~D~~i~iWd~~~~~-----------~~~~~~-~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~--------- 260 (304)
T 2ynn_A 202 ITASDDLTIKIWDYQTKS-----------CVATLE-GHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY--------- 260 (304)
T ss_dssp EEEETTSEEEEEETTTTE-----------EEEEEE-CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC---------
T ss_pred EEEcCCCeEEEEeCCCCc-----------cceeeC-CCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCC---------
Confidence 999999999999986432 222333 478889999999976 6889999999999976542
Q ss_pred eeeeeccCCCCCeeEEEEcCCCCe-eEEEeCCCCeEEEEEccc
Q 023500 238 MLLKKEKAHDMDVNSVQWSPGERR-LLASASDDGMIKIWELAN 279 (281)
Q Consensus 238 ~~~~~~~~h~~~v~~~~~~~~~~~-~~~s~~~Dg~v~iw~~~~ 279 (281)
........|...+++++|+|++.. ++++|+. ..+.+|++.+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~-~g~~~~~~~~ 302 (304)
T 2ynn_A 261 KVEKTLNVGLERSWCIATHPTGRKNYIASGFD-NGFTVLSLGN 302 (304)
T ss_dssp CEEEEECCSSSSEEEEEECTTCGGGCEEEEET-TEEEEEECC-
T ss_pred ceeeeccCCCccEEEEEECCCCCceEEEEecC-CceEEEEecc
Confidence 123344578889999999998754 4666664 5566888765
No 25
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.3e-37 Score=254.84 Aligned_cols=244 Identities=20% Similarity=0.313 Sum_probs=193.6
Q ss_pred CccceeEEEE-----cC-CCCEEEEeeCCCcEEEEecCCCc-----eeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCc
Q 023500 2 HTRTVRSCAW-----SP-SGKLLATASFDATTCIWEDVGGD-----YECVATLEGHENEVKSVSWNASGTLLATCGRDKS 70 (281)
Q Consensus 2 h~~~i~~~~~-----~~-~~~~l~tg~~d~~i~lw~~~~~~-----~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~ 70 (281)
|.+.|++++| ++ ++++||+|+.|+.|+|||....+ ..+...+.+|...|.+++|+|++.+|++|+.|++
T Consensus 20 H~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~ 99 (343)
T 2xzm_R 20 HSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKT 99 (343)
T ss_dssp CSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSE
T ss_pred chhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCc
Confidence 8899999999 77 89999999999999999976432 2346678899999999999999999999999999
Q ss_pred EEEEEecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEE
Q 023500 71 VWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALS 150 (281)
Q Consensus 71 v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 150 (281)
|++||+..+. ....+.+|...|.+++|+|++.++++++.|++|++|++... +.... ....+|...|.+++
T Consensus 100 v~lwd~~~~~---~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~------~~~~~-~~~~~~~~~v~~~~ 169 (343)
T 2xzm_R 100 LRLWDLRTGT---TYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE------CKFSS-AEKENHSDWVSCVR 169 (343)
T ss_dssp EEEEETTSSC---EEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC------EEEEC-CTTTSCSSCEEEEE
T ss_pred EEEEECCCCc---EEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC------ceeee-ecccCCCceeeeee
Confidence 9999997664 35677899999999999999999999999999999988632 11111 12236888999999
Q ss_pred EccCC----------CEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCc
Q 023500 151 FNAKG----------DKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDS 219 (281)
Q Consensus 151 ~~~~~----------~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~ 219 (281)
|+|++ .+|++++.|+.|++||... .....+ ..|...|.+++|+|++ ++++++.|+.
T Consensus 170 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~------------~~~~~~-~~h~~~v~~~~~s~~g~~l~sgs~dg~ 236 (343)
T 2xzm_R 170 YSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF------------QIRYTF-KAHESNVNHLSISPNGKYIATGGKDKK 236 (343)
T ss_dssp ECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT------------EEEEEE-ECCSSCEEEEEECTTSSEEEEEETTCE
T ss_pred eccccccccccCCCCCEEEEEcCCCEEEEEcCCC------------ceeEEE-cCccccceEEEECCCCCEEEEEcCCCe
Confidence 99986 6899999999999998532 111222 2478899999999987 6889999999
Q ss_pred EEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 220 VQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
+++|+...... . ... ..+...|++++|+|+++ +++ ++.|+.|++|++..
T Consensus 237 v~iwd~~~~~~----~-~~~----~~~~~~v~~v~~sp~~~-~la-~~~d~~v~iw~~~~ 285 (343)
T 2xzm_R 237 LLIWDILNLTY----P-QRE----FDAGSTINQIAFNPKLQ-WVA-VGTDQGVKIFNLMT 285 (343)
T ss_dssp EEEEESSCCSS----C-SEE----EECSSCEEEEEECSSSC-EEE-EEESSCEEEEESSS
T ss_pred EEEEECCCCcc----c-cee----ecCCCcEEEEEECCCCC-EEE-EECCCCEEEEEeCC
Confidence 99998732111 1 011 12345699999999865 454 55688999999854
No 26
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3e-38 Score=278.91 Aligned_cols=258 Identities=21% Similarity=0.345 Sum_probs=199.9
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCC----CcEEEEEec
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRD----KSVWIWEVM 77 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d----~~v~~w~~~ 77 (281)
|.+.|++++|+|+|++||+|+.|+.|+|||..+++......+.+|.+.|.+++|+|+|++|++++.+ ++|++||.
T Consensus 58 h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~- 136 (611)
T 1nr0_A 58 HSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT- 136 (611)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT-
T ss_pred CCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC-
Confidence 7889999999999999999999999999998655444556788999999999999999999998875 37888874
Q ss_pred CCCeeEEeEeecCCccceeEEEecCCCC-eEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCC
Q 023500 78 PGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD 156 (281)
Q Consensus 78 ~~~~~~~~~~~~~~~~~v~~v~~~p~~~-~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 156 (281)
+. ....+.+|...|++++|+|++. .+++++.|++|++|+.... ++...+ .+|...|.+++|+|+++
T Consensus 137 -~~---~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~-----~~~~~l----~~H~~~V~~v~fspdg~ 203 (611)
T 1nr0_A 137 -GT---SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF-----KFKSTF----GEHTKFVHSVRYNPDGS 203 (611)
T ss_dssp -CC---BCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB-----EEEEEE----CCCSSCEEEEEECTTSS
T ss_pred -CC---CcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCC-----eEeeee----ccccCceEEEEECCCCC
Confidence 22 2456789999999999999987 5999999999999986432 233333 47999999999999999
Q ss_pred EEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEEecccCCCcCCcc
Q 023500 157 KLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPS 235 (281)
Q Consensus 157 ~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~ 235 (281)
+|++|+.|++|++||...+........... ....|...|.+++|+|++ ++++++.|+.+++|+...........
T Consensus 204 ~las~s~D~~i~lwd~~~g~~~~~~~~~~~-----~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~ 278 (611)
T 1nr0_A 204 LFASTGGDGTIVLYNGVDGTKTGVFEDDSL-----KNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIP 278 (611)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEECBCTTS-----SSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EEEEEECCCcEEEEECCCCcEeeeeccccc-----cccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeec
Confidence 999999999999999764322110000000 001478899999999986 68899999999999875422110000
Q ss_pred ----------------------------------ceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 236 ----------------------------------YKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 236 ----------------------------------~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
.........+|...|++++|+|+++ +|++++.|+.|++||+..
T Consensus 279 ~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~-~l~s~s~D~~v~~Wd~~~ 355 (611)
T 1nr0_A 279 VGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGK-TLFSADAEGHINSWDIST 355 (611)
T ss_dssp CCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTT
T ss_pred CCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCC-EEEEEeCCCcEEEEECCC
Confidence 0011223457999999999999876 578999999999999864
No 27
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.8e-37 Score=254.68 Aligned_cols=256 Identities=26% Similarity=0.402 Sum_probs=206.4
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCC--CCEEEEecCCCcEEEEEecCC
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS--GTLLATCGRDKSVWIWEVMPG 79 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~--~~~l~s~~~d~~v~~w~~~~~ 79 (281)
|...|++++|+|++++||+|+.|+.|+||+........+..+.+|...|++++|+|+ +++|++++.|+.|++||+..+
T Consensus 10 h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 89 (379)
T 3jrp_A 10 HNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG 89 (379)
T ss_dssp CCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETT
T ss_pred CcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCC
Confidence 889999999999999999999999999999876666677888999999999999987 999999999999999999765
Q ss_pred CeeEEeEeecCCccceeEEEecCC--CCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEcc----
Q 023500 80 NEFECVSVLQGHAQDVKMVQWHPT--MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNA---- 153 (281)
Q Consensus 80 ~~~~~~~~~~~~~~~v~~v~~~p~--~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---- 153 (281)
. ......+..|...|.+++|+|+ +.++++++.|+.|++|++....... ... ..+|...|.+++|+|
T Consensus 90 ~-~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~---~~~----~~~~~~~v~~~~~~~~~~~ 161 (379)
T 3jrp_A 90 R-WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTS---PII----IDAHAIGVNSASWAPATIE 161 (379)
T ss_dssp E-EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCC---EEE----EECCTTCEEEEEECCCC--
T ss_pred c-eeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCcee---eEE----ecCCCCceEEEEEcCcccc
Confidence 3 2356677889999999999999 8999999999999999987653211 111 236888999999999
Q ss_pred ---------CCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCC----ceeeecCCCCcE
Q 023500 154 ---------KGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE----GIIASGAADDSV 220 (281)
Q Consensus 154 ---------~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~~~~~~d~~~ 220 (281)
++.+|++++.|+.|++||+...... ......+ ..|...+.+++|+|+ .++++++.|+.+
T Consensus 162 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-------~~~~~~~-~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i 233 (379)
T 3jrp_A 162 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT-------YVLESTL-EGHSDWVRDVAWSPTVLLRSYLASVSQDRTC 233 (379)
T ss_dssp --------CTTCEEEEEETTSCEEEEEEETTTTE-------EEEEEEE-CCCSSCEEEEEECCCCSSSEEEEEEETTSCE
T ss_pred ccccccCCCCCCEEEEEeCCCeEEEEEecCCCcc-------eeeEEEE-ecccCcEeEEEECCCCCCCCeEEEEeCCCEE
Confidence 6899999999999999987633211 1112222 247889999999997 468889999999
Q ss_pred EEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEcc
Q 023500 221 QFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 278 (281)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~ 278 (281)
++|+...... ...........|...|++++|+|++. +|++++.||.|++|++.
T Consensus 234 ~iwd~~~~~~----~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 234 IIWTQDNEQG----PWKKTLLKEEKFPDVLWRASWSLSGN-VLALSGGDNKVTLWKEN 286 (379)
T ss_dssp EEEEESSTTS----CCEEEESSSSCCSSCEEEEEECSSSC-CEEEEESSSSEEEEEEE
T ss_pred EEEeCCCCCc----cceeeeeccccCCCcEEEEEEcCCCC-EEEEecCCCcEEEEeCC
Confidence 9998764321 11112223345888999999999886 57788889999999986
No 28
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=3.5e-36 Score=246.65 Aligned_cols=267 Identities=20% Similarity=0.327 Sum_probs=207.3
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCc--eeeeeeecCCCCCeeEEEEcC--CCCEEEEecCCCcEEEEEec
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGD--YECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEVM 77 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~--~~~~~~~~~h~~~v~~v~~~~--~~~~l~s~~~d~~v~~w~~~ 77 (281)
|.+.|++++|+|++++||+|+.|+.|++|+..++. ......+.+|...|.+++|+| ++.+|++++.|++|++||+.
T Consensus 10 H~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~ 89 (351)
T 3f3f_A 10 HDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEED 89 (351)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEC
T ss_pred cccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecC
Confidence 88999999999999999999999999999986542 345677889999999999999 69999999999999999997
Q ss_pred CCC------eeEEeEeecCCccceeEEEecCC--CCeEEEEecCCeEEEEeCCCCCCCCc-ee---eeeeeeccCCcccc
Q 023500 78 PGN------EFECVSVLQGHAQDVKMVQWHPT--MDVLFSCSYDNTIKVWWAEDTDSDNW-HC---VQTISESNNGHSST 145 (281)
Q Consensus 78 ~~~------~~~~~~~~~~~~~~v~~v~~~p~--~~~l~s~s~d~~v~~w~~~~~~~~~~-~~---~~~~~~~~~~h~~~ 145 (281)
.+. .......+.+|...|.+++|+|+ +.++++++.|+.|++|++........ .. .........+|...
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (351)
T 3f3f_A 90 PDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQS 169 (351)
T ss_dssp TTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCC
T ss_pred CCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccc
Confidence 653 12456778899999999999999 99999999999999999876532211 10 11111122367788
Q ss_pred EEEEEEccC---CCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-----eeeecCCC
Q 023500 146 IWALSFNAK---GDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-----IIASGAAD 217 (281)
Q Consensus 146 v~~~~~~~~---~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----~~~~~~~d 217 (281)
+.+++|+|+ +..|++++.|+.+.+|+...... .....+ ..|...|.++.|+|++ ++++++.|
T Consensus 170 ~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~---------~~~~~~-~~h~~~i~~~~~~p~~~~~~~~l~s~~~d 239 (351)
T 3f3f_A 170 DFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKL---------HVAAKL-PGHKSLIRSISWAPSIGRWYQLIATGCKD 239 (351)
T ss_dssp CEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCE---------EEEEEC-CCCCSCEEEEEECCCSSCSSEEEEEEETT
T ss_pred eeEEEeccCCCCCcEEEEecCCCcEEEEccCCCce---------eeeeec-CCCCcceeEEEECCCCCCcceEEEEEcCC
Confidence 999999997 88999999999997776543221 112222 2478899999999985 79999999
Q ss_pred CcEEEEecccCCCcC-------------------------------------CccceeeeeeccCCCCCeeEEEEcCCCC
Q 023500 218 DSVQFFVESKDDLID-------------------------------------GPSYKMLLKKEKAHDMDVNSVQWSPGER 260 (281)
Q Consensus 218 ~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 260 (281)
+.+++|+........ ............+|...|++++|+|+++
T Consensus 240 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~ 319 (351)
T 3f3f_A 240 GRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGT 319 (351)
T ss_dssp SCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSC
T ss_pred CeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCC
Confidence 999999876421100 0001123445567999999999999875
Q ss_pred eeEEEeCCCCeEEEEEccc
Q 023500 261 RLLASASDDGMIKIWELAN 279 (281)
Q Consensus 261 ~~~~s~~~Dg~v~iw~~~~ 279 (281)
+|++++.||.|+||++..
T Consensus 320 -~l~s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 320 -ILSSAGDDGKVRLWKATY 337 (351)
T ss_dssp -CEEEEETTSCEEEEEECT
T ss_pred -EEEEecCCCcEEEEecCc
Confidence 688999999999999875
No 29
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.8e-36 Score=247.04 Aligned_cols=241 Identities=27% Similarity=0.389 Sum_probs=193.7
Q ss_pred CccceeEEEEcCCC-CEEEEeeCCCcEEEEecCCCc---eeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEec
Q 023500 2 HTRTVRSCAWSPSG-KLLATASFDATTCIWEDVGGD---YECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVM 77 (281)
Q Consensus 2 h~~~i~~~~~~~~~-~~l~tg~~d~~i~lw~~~~~~---~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~ 77 (281)
|++.|++++|+|++ ++|++|+.|+.|++|+..... ..++..+.+|...|.+++|+|+|++|++|+.|++|++||+.
T Consensus 16 H~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~ 95 (319)
T 3frx_A 16 HNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVA 95 (319)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred ccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 88999999999965 899999999999999875322 23467889999999999999999999999999999999997
Q ss_pred CCCeeEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccC---
Q 023500 78 PGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK--- 154 (281)
Q Consensus 78 ~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--- 154 (281)
.++ +...+.+|...|.+++|+|++.++++++.|++|++|++... ++..+ .+|...|.++.|+|.
T Consensus 96 ~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~------~~~~~----~~h~~~v~~~~~~~~~~~ 162 (319)
T 3frx_A 96 TGE---TYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ------CLATL----LGHNDWVSQVRVVPNEKA 162 (319)
T ss_dssp TTE---EEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC------EEEEE----CCCSSCEEEEEECCC---
T ss_pred CCC---eeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC------eEEEE----eccCCcEEEEEEccCCCC
Confidence 654 45678899999999999999999999999999999988532 23333 378899999999985
Q ss_pred ---CCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEEecccCCC
Q 023500 155 ---GDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDL 230 (281)
Q Consensus 155 ---~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~ 230 (281)
+..|++++.|+.|++||+...+ ....+ ..|...|.+++++|++ ++++++.|+.+++|+.....
T Consensus 163 ~~~~~~l~s~~~d~~i~~wd~~~~~-----------~~~~~-~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~- 229 (319)
T 3frx_A 163 DDDSVTIISAGNDKMVKAWNLNQFQ-----------IEADF-IGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKK- 229 (319)
T ss_dssp ---CCEEEEEETTSCEEEEETTTTE-----------EEEEE-CCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE-
T ss_pred CCCccEEEEEeCCCEEEEEECCcch-----------hheee-cCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc-
Confidence 4489999999999999986422 12222 2478899999999986 68889999999999775421
Q ss_pred cCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 231 IDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 231 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
...... +..+|.+++|+|++. ++++++ ++.+++|++..
T Consensus 230 --------~~~~~~-~~~~v~~~~~sp~~~-~la~~~-~~~i~v~~~~~ 267 (319)
T 3frx_A 230 --------AMYTLS-AQDEVFSLAFSPNRY-WLAAAT-ATGIKVFSLDP 267 (319)
T ss_dssp --------EEEEEE-CCSCEEEEEECSSSS-EEEEEE-TTEEEEEEETT
T ss_pred --------EEEEec-CCCcEEEEEEcCCCC-EEEEEc-CCCcEEEEeCc
Confidence 122222 346799999999875 465555 55699998753
No 30
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.7e-36 Score=267.71 Aligned_cols=260 Identities=22% Similarity=0.344 Sum_probs=200.8
Q ss_pred CccceeEEEEcCCCC-EEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCC
Q 023500 2 HTRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN 80 (281)
Q Consensus 2 h~~~i~~~~~~~~~~-~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~ 80 (281)
|.+.|++++|+|+++ +|++|+.|++|++||..+. ++...+.+|...|++++|+|+|++|++|+.|++|++||+..++
T Consensus 146 h~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~--~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~ 223 (611)
T 1nr0_A 146 QARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF--KFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGT 223 (611)
T ss_dssp CSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB--EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred CCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCC--eEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCc
Confidence 788999999999987 5999999999999997654 4577889999999999999999999999999999999987664
Q ss_pred eeEEeEeec-------CCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCcee--------e-------------
Q 023500 81 EFECVSVLQ-------GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHC--------V------------- 132 (281)
Q Consensus 81 ~~~~~~~~~-------~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~--------~------------- 132 (281)
. ...+. +|...|.+++|+|++++|++++.|++|++|+++......... .
T Consensus 224 ~---~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~ 300 (611)
T 1nr0_A 224 K---TGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSI 300 (611)
T ss_dssp E---EEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEE
T ss_pred E---eeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEE
Confidence 3 33442 799999999999999999999999999999987532100000 0
Q ss_pred -------------eeeeeccCCccccEEEEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcc
Q 023500 133 -------------QTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRT 199 (281)
Q Consensus 133 -------------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (281)
........+|...|++++|+|++++|++++.|++|++||+...... ..+...|...
T Consensus 301 s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~-----------~~~~~~h~~~ 369 (611)
T 1nr0_A 301 SANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISN-----------RVFPDVHATM 369 (611)
T ss_dssp ETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE-----------ECSSCSCSSC
T ss_pred eCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCcee-----------eecccCCcce
Confidence 0001122479999999999999999999999999999998643221 1111246788
Q ss_pred eEEEEeCCCceeeecCCCCcEEEEecccCCCcCCc---------cce--------e----------e-----eeeccCCC
Q 023500 200 IFSVHWSREGIIASGAADDSVQFFVESKDDLIDGP---------SYK--------M----------L-----LKKEKAHD 247 (281)
Q Consensus 200 v~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~---------~~~--------~----------~-----~~~~~~h~ 247 (281)
+.++.+++++.+++++.|+.+++|+.......... ... . + .. ...|.
T Consensus 370 v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~-~~~~~ 448 (611)
T 1nr0_A 370 ITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLT-EVPIS 448 (611)
T ss_dssp EEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEE-EEECS
T ss_pred EEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCcee-eeecC
Confidence 99999999999999999999999976543211100 000 0 0 00 11256
Q ss_pred CCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 248 MDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 248 ~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
..+++++|+|+++ ++++|+.|+.|+||++..
T Consensus 449 ~~v~~va~spdg~-~lasgs~D~~v~lwd~~~ 479 (611)
T 1nr0_A 449 YNSSCVALSNDKQ-FVAVGGQDSKVHVYKLSG 479 (611)
T ss_dssp SCEEEEEECTTSC-EEEEEETTSEEEEEEEET
T ss_pred CCceEEEEeCCCC-EEEEeCCCCeEEEEEccC
Confidence 7799999999876 688999999999999854
No 31
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=3.1e-37 Score=261.95 Aligned_cols=257 Identities=15% Similarity=0.166 Sum_probs=191.1
Q ss_pred CccceeEEEEcC-CCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcC-CCCEEEEecCCCcEEEEEecCC
Q 023500 2 HTRTVRSCAWSP-SGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA-SGTLLATCGRDKSVWIWEVMPG 79 (281)
Q Consensus 2 h~~~i~~~~~~~-~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~v~~w~~~~~ 79 (281)
|.+.|++++|+| ++++||+|+.||.|+|||..+++......+.+|.+.|++++|+| ++.+|+|||.|++|++||+...
T Consensus 118 ~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~ 197 (435)
T 4e54_B 118 FDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGN 197 (435)
T ss_dssp CSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSC
T ss_pred CCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCC
Confidence 567899999999 56799999999999999987766555667789999999999998 7899999999999999998643
Q ss_pred CeeEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCC-EE
Q 023500 80 NEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD-KL 158 (281)
Q Consensus 80 ~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l 158 (281)
..........+...+.+++|+|++.++++|+.|+.|++|+++.. .+.. ..+|...|.+++|+|++. +|
T Consensus 198 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~------~~~~----~~~h~~~v~~v~~~p~~~~~~ 266 (435)
T 4e54_B 198 -ILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK------ELWN----LRMHKKKVTHVALNPCCDWFL 266 (435)
T ss_dssp -EEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC------BCCC----SBCCSSCEEEEEECTTCSSEE
T ss_pred -ceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc------eeEE----EecccceEEeeeecCCCceEE
Confidence 22222222334456789999999999999999999999987542 1222 247899999999999876 78
Q ss_pred EEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEEecccCCCcC-----
Q 023500 159 VSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLID----- 232 (281)
Q Consensus 159 ~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~----- 232 (281)
++|+.|+.|++||+........ ......|...|.+++|+|++ ++++++.|+.+++|+........
T Consensus 267 ~s~s~d~~v~iwd~~~~~~~~~---------~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~ 337 (435)
T 4e54_B 267 ATASVDQTVKIWDLRQVRGKAS---------FLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPH 337 (435)
T ss_dssp EEEETTSBCCEEETTTCCSSSC---------CSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCC
T ss_pred EEecCcceeeEEecccccccce---------EEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecc
Confidence 8999999999999864321110 01112477889999999876 68899999999999865321100
Q ss_pred ---------------------------------------Cccc--------eeeeeeccCCCCCeeEE-EEcCCCCeeEE
Q 023500 233 ---------------------------------------GPSY--------KMLLKKEKAHDMDVNSV-QWSPGERRLLA 264 (281)
Q Consensus 233 ---------------------------------------~~~~--------~~~~~~~~~h~~~v~~~-~~~~~~~~~~~ 264 (281)
.... .........|...|.++ +|+|++. +|+
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~-~la 416 (435)
T 4e54_B 338 PHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGD-TLA 416 (435)
T ss_dssp CCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSS-CEE
T ss_pred cccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCC-EEE
Confidence 0000 00011123577778887 6999875 577
Q ss_pred EeCCCCeEEEEEcccC
Q 023500 265 SASDDGMIKIWELANT 280 (281)
Q Consensus 265 s~~~Dg~v~iw~~~~~ 280 (281)
+|+ |+.|+||++...
T Consensus 417 sg~-d~~i~iW~~~~g 431 (435)
T 4e54_B 417 SAM-GYHILIWSQQEA 431 (435)
T ss_dssp EEC-SSEEEECCCC--
T ss_pred EEc-CCcEEEEECCcC
Confidence 776 889999998653
No 32
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=5.3e-36 Score=243.37 Aligned_cols=242 Identities=29% Similarity=0.536 Sum_probs=193.0
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|...|.+++|+|++++|++|+.|+.|++||..+++ ++..+.+|...|.+++|+|++++|++|+.|++|++||+..+.
T Consensus 64 h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~- 140 (312)
T 4ery_A 64 HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK--CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK- 140 (312)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC-
T ss_pred CCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCc--EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCE-
Confidence 77889999999999999999999999999987764 467888999999999999999999999999999999997654
Q ss_pred eEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEe
Q 023500 82 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 161 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 161 (281)
+...+..|...|.++.|+|++.++++++.|+.|++|++.... .+..+ ...+...+..++|+|++++|+++
T Consensus 141 --~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~-----~~~~~---~~~~~~~~~~~~~~~~~~~l~~~ 210 (312)
T 4ery_A 141 --CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ-----CLKTL---IDDDNPPVSFVKFSPNGKYILAA 210 (312)
T ss_dssp --EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC-----EEEEE---CCSSCCCEEEEEECTTSSEEEEE
T ss_pred --EEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc-----eeeEE---eccCCCceEEEEECCCCCEEEEE
Confidence 456778899999999999999999999999999999886542 22222 22456778999999999999999
Q ss_pred eCCCcEEEEeCCccccccCCCCcccceeEEeecccCcc---eE-EEEeCCCceeeecCCCCcEEEEecccCCCcCCccce
Q 023500 162 SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRT---IF-SVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYK 237 (281)
Q Consensus 162 ~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---v~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 237 (281)
+.|+.|++||+...+. ...+.+ |... +. ........++++++.|+.+++|+....
T Consensus 211 ~~d~~i~iwd~~~~~~-----------~~~~~~-~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~--------- 269 (312)
T 4ery_A 211 TLDNTLKLWDYSKGKC-----------LKTYTG-HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTK--------- 269 (312)
T ss_dssp ETTTEEEEEETTTTEE-----------EEEECS-SCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTC---------
T ss_pred cCCCeEEEEECCCCcE-----------EEEEEe-cCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCc---------
Confidence 9999999999864332 111111 1111 11 222233557899999999999977542
Q ss_pred eeeeeccCCCCCeeEEEEcCCCCeeEEEeC--CCCeEEEEEcc
Q 023500 238 MLLKKEKAHDMDVNSVQWSPGERRLLASAS--DDGMIKIWELA 278 (281)
Q Consensus 238 ~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~--~Dg~v~iw~~~ 278 (281)
.......+|...|.+++|+|++. ++++++ .|+.|++|+..
T Consensus 270 ~~~~~~~~h~~~v~~~~~~p~~~-~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 270 EIVQKLQGHTDVVISTACHPTEN-IIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CEEEEECCCSSCEEEEEECSSSS-EEEEEECTTTCCEEEEECC
T ss_pred hhhhhhhccCCcEEEEeecCcCC-ceEEEEccCCccEEEecCC
Confidence 23345568999999999999876 566765 69999999864
No 33
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.3e-36 Score=252.43 Aligned_cols=256 Identities=25% Similarity=0.402 Sum_probs=193.1
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCC------------------CCeeEEEEcCCCCEEE
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHE------------------NEVKSVSWNASGTLLA 63 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~------------------~~v~~v~~~~~~~~l~ 63 (281)
|...|++++|+|+|++||+|+ |+.++||+..+++. +..+.+|. ..|.+++|+|+|++|+
T Consensus 63 h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~ 139 (393)
T 1erj_A 63 HTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSL--VARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 139 (393)
T ss_dssp CSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCE--EEEECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred CCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCE--EEEecCccccccccccccccccCCCceeEEEEEECCCCCEEE
Confidence 788999999999999999987 68899999877653 33444332 2489999999999999
Q ss_pred EecCCCcEEEEEecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCcc
Q 023500 64 TCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHS 143 (281)
Q Consensus 64 s~~~d~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~ 143 (281)
+|+.|++|++||+... +....+.+|...|.+++|+|++..+++++.|++|++|++.... +...+. +.
T Consensus 140 s~~~d~~i~iwd~~~~---~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~-----~~~~~~-----~~ 206 (393)
T 1erj_A 140 TGAEDRLIRIWDIENR---KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ-----CSLTLS-----IE 206 (393)
T ss_dssp EEETTSCEEEEETTTT---EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE-----EEEEEE-----CS
T ss_pred EEcCCCeEEEEECCCC---cEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCe-----eEEEEE-----cC
Confidence 9999999999998755 3466788999999999999999999999999999999886542 233332 34
Q ss_pred ccEEEEEEcc-CCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcEE
Q 023500 144 STIWALSFNA-KGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQ 221 (281)
Q Consensus 144 ~~v~~~~~~~-~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~ 221 (281)
..+.+++|+| ++.+|++|+.|+.|++||......... ..........|...|.++.|++++ ++++++.|+.++
T Consensus 207 ~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~-----~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~ 281 (393)
T 1erj_A 207 DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVER-----LDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVK 281 (393)
T ss_dssp SCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEE-----EC------CCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred CCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEe-----ecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 6789999999 889999999999999999864432110 000000112477889999999876 688999999999
Q ss_pred EEecccCCCcCC---ccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 222 FFVESKDDLIDG---PSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 222 ~~~~~~~~~~~~---~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
+|+......... +..........+|...|.+++|+|++. +|++|+.|+.|++||+..
T Consensus 282 ~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~sgs~D~~v~iwd~~~ 341 (393)
T 1erj_A 282 LWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDE-YILSGSKDRGVLFWDKKS 341 (393)
T ss_dssp EEEC---------------CEEEEEECCSSCEEEEEECGGGC-EEEEEETTSEEEEEETTT
T ss_pred EEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCC-EEEEEeCCCeEEEEECCC
Confidence 998754321110 001112234467999999999999875 678999999999999864
No 34
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=9e-37 Score=273.30 Aligned_cols=253 Identities=19% Similarity=0.389 Sum_probs=194.2
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|...|++++|+|++++|++|+.|+.|+|||..++. +...+.+|...|.+++|+|++++|++||.|++|++||+.....
T Consensus 429 h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~--~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~ 506 (694)
T 3dm0_A 429 HSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGV--STRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECK 506 (694)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE--EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE
T ss_pred CCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCc--ceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcc
Confidence 78899999999999999999999999999987764 4677889999999999999999999999999999999754332
Q ss_pred eEEeEeecCCccceeEEEecCCC--CeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEE
Q 023500 82 FECVSVLQGHAQDVKMVQWHPTM--DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV 159 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~v~~~p~~--~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 159 (281)
........+|...|.+++|+|++ ..+++++.|++|++|++.... +... ..+|...|.+++|+|++++|+
T Consensus 507 ~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~-----~~~~----~~~h~~~v~~v~~spdg~~l~ 577 (694)
T 3dm0_A 507 YTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK-----LRST----LAGHTGYVSTVAVSPDGSLCA 577 (694)
T ss_dssp EEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC-----EEEE----ECCCSSCEEEEEECTTSSEEE
T ss_pred eeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc-----EEEE----EcCCCCCEEEEEEeCCCCEEE
Confidence 22222235788899999999986 579999999999999886542 2222 247999999999999999999
Q ss_pred EeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecCCCCcEEEEecccCCCcCCccce--
Q 023500 160 SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYK-- 237 (281)
Q Consensus 160 s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-- 237 (281)
+|+.|+.|++||+...+. +..+ .+...+.+++|+|++.+++++.++.+++|+.............
T Consensus 578 sg~~Dg~i~iwd~~~~~~-----------~~~~--~~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~ 644 (694)
T 3dm0_A 578 SGGKDGVVLLWDLAEGKK-----------LYSL--EANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLK 644 (694)
T ss_dssp EEETTSBCEEEETTTTEE-----------EECC--BCSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCCCC
T ss_pred EEeCCCeEEEEECCCCce-----------EEEe--cCCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhccccc
Confidence 999999999999864432 1111 2356789999999998888888888999987653221100000
Q ss_pred e--e------eeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 238 M--L------LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 238 ~--~------~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
. . ......+...+++++|+|+++ +|++|+.||.|+||++..
T Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~-~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 645 AEAEKADNSGPAATKRKVIYCTSLNWSADGS-TLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp ----------------CCCCEEEEEECTTSS-EEEEEETTSEEEEEEC--
T ss_pred cccccccccccccCCceeEEeeeEEEcCCCC-EEEEEcCCCeEEEEeccC
Confidence 0 0 000011223478999999886 578999999999999863
No 35
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.8e-37 Score=258.26 Aligned_cols=263 Identities=17% Similarity=0.274 Sum_probs=196.9
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|...|++++|+|+|++||+|+.|+.|+||+..++...++..+.+|...|.+++|+|++++|++++.|++|++||+..+..
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~ 89 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGT 89 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------C
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCc
Confidence 46789999999999999999999999999998775566788899999999999999999999999999999999976652
Q ss_pred eEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEe
Q 023500 82 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 161 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 161 (281)
..+...+.+|...|.+++|+|+++++++++.|+.|++|+++.... +.....+. ..|...|.+++|+|++.+|+++
T Consensus 90 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~~---~~h~~~v~~~~~~~~~~~l~~~ 164 (377)
T 3dwl_C 90 WKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQEND--WWVSKHLK---RPLRSTILSLDWHPNNVLLAAG 164 (377)
T ss_dssp CCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-------CCCCEEEC---SSCCSCEEEEEECTTSSEEEEE
T ss_pred eeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCccc--ceeeeEee---cccCCCeEEEEEcCCCCEEEEE
Confidence 334566788999999999999999999999999999998865421 11122221 2388999999999999999999
Q ss_pred eCCCcEEEEeCCccccccCCCC-------cccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEEecccCCCcCC
Q 023500 162 SDDLTIKIWGADITRMQSGDGY-------ASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDG 233 (281)
Q Consensus 162 ~~d~~i~~w~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~ 233 (281)
+.|+.|++||+........... ........+ .|...+.+++|+|++ ++++++.|+.+++|+......
T Consensus 165 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~--- 239 (377)
T 3dwl_C 165 CADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ--- 239 (377)
T ss_dssp ESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS---
T ss_pred eCCCEEEEEEEEecccCCCccccccccccchhhhhhcc--cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC---
Confidence 9999999999853321111000 001122222 578889999999976 588899999999998765321
Q ss_pred ccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEcc
Q 023500 234 PSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 278 (281)
Q Consensus 234 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~ 278 (281)
..........|..+|++++|+|+++ +|++++.|+.+ +|+..
T Consensus 240 --~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 240 --PPRALITVKLSQLPLRSLLWANESA-IVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp --CEEECCCEECSSSCEEEEEEEETTE-EEEEESSSSEE-EECCC
T ss_pred --cceeeEeecCCCCceEEEEEcCCCC-EEEEEcCCcEE-EEEeC
Confidence 0111334567889999999999875 67788866666 66654
No 36
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=5.6e-36 Score=248.40 Aligned_cols=262 Identities=16% Similarity=0.265 Sum_probs=202.9
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|...|++++|+|++++|++|+.|+.|++||..+++......+.+|...|.+++|+|++++|++++.|+.|++||+.....
T Consensus 51 h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~ 130 (372)
T 1k8k_C 51 HNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEND 130 (372)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTT
T ss_pred CCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCc
Confidence 77899999999999999999999999999998776555556678999999999999999999999999999999987664
Q ss_pred eEEe-EeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCC-------------CceeeeeeeeccCCccccEE
Q 023500 82 FECV-SVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD-------------NWHCVQTISESNNGHSSTIW 147 (281)
Q Consensus 82 ~~~~-~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~-------------~~~~~~~~~~~~~~h~~~v~ 147 (281)
.... ....+|...|.+++|+|+++++++++.|+.|++|++...... ..+.+.. ..+|...|.
T Consensus 131 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~v~ 206 (372)
T 1k8k_C 131 WWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFE----SSSSCGWVH 206 (372)
T ss_dssp EEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEE----CCCCSSCEE
T ss_pred ceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEe----cCCCCCeEE
Confidence 3333 334678899999999999999999999999999997532111 1112222 236888999
Q ss_pred EEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecCCCCcEEEEeccc
Q 023500 148 ALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESK 227 (281)
Q Consensus 148 ~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~~~~~~~~~ 227 (281)
+++|+|++.+|++++.|+.|++||.+..+ ....+. .+..++.+++|++++.+++++.|+.+++|+...
T Consensus 207 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-----------~~~~~~-~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~ 274 (372)
T 1k8k_C 207 GVCFSANGSRVAWVSHDSTVCLADADKKM-----------AVATLA-SETLPLLAVTFITESSLVAAGHDCFPVLFTYDS 274 (372)
T ss_dssp EEEECSSSSEEEEEETTTEEEEEEGGGTT-----------EEEEEE-CSSCCEEEEEEEETTEEEEEETTSSCEEEEEET
T ss_pred EEEECCCCCEEEEEeCCCEEEEEECCCCc-----------eeEEEc-cCCCCeEEEEEecCCCEEEEEeCCeEEEEEccC
Confidence 99999999999999999999999986432 222222 367789999999988777667999999998765
Q ss_pred --CCC--cC----------------------Cccceee------eeeccCCCCCeeEEEEcCCCC---eeEEEeCCCCeE
Q 023500 228 --DDL--ID----------------------GPSYKML------LKKEKAHDMDVNSVQWSPGER---RLLASASDDGMI 272 (281)
Q Consensus 228 --~~~--~~----------------------~~~~~~~------~~~~~~h~~~v~~~~~~~~~~---~~~~s~~~Dg~v 272 (281)
+.. .. ....... .....+|..+|++++|++.+. .+|++|+.||.|
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i 354 (372)
T 1k8k_C 275 AAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGM 354 (372)
T ss_dssp TTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEE
T ss_pred cCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCce
Confidence 210 00 0000000 112248999999999875543 578999999999
Q ss_pred EEEEccc
Q 023500 273 KIWELAN 279 (281)
Q Consensus 273 ~iw~~~~ 279 (281)
++|++..
T Consensus 355 ~~W~~~~ 361 (372)
T 1k8k_C 355 SIWDVRS 361 (372)
T ss_dssp EEEEHHH
T ss_pred EEEEecC
Confidence 9999864
No 37
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.3e-36 Score=263.91 Aligned_cols=234 Identities=33% Similarity=0.591 Sum_probs=196.3
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|...|++++|+|+|++|++|+.|+.+++|+... ..+..+.+|...|.+++|+|+|++|++++.|+.|++|+.. +
T Consensus 343 ~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~---~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~-~-- 416 (577)
T 2ymu_A 343 HSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG---QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-G-- 416 (577)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTC---CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-C--
T ss_pred CCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCC---CEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC-C--
Confidence 678899999999999999999999999999643 3466788999999999999999999999999999999953 2
Q ss_pred eEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEe
Q 023500 82 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 161 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 161 (281)
+....+.+|...|.+++|+|++.++++++.|++|++|+.... .+..+ .+|...|.+++|+|++++|+++
T Consensus 417 -~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~------~~~~~----~~~~~~v~~~~~spd~~~las~ 485 (577)
T 2ymu_A 417 -QLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQ------LLQTL----TGHSSSVRGVAFSPDGQTIASA 485 (577)
T ss_dssp -CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSC------EEEEE----ECCSSCEEEEEECTTSCEEEEE
T ss_pred -CEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCC------EEEEE----cCCCCCEEEEEEcCCCCEEEEE
Confidence 245667899999999999999999999999999999986432 23333 3688999999999999999999
Q ss_pred eCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEEecccCCCcCCccceeee
Q 023500 162 SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLL 240 (281)
Q Consensus 162 ~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 240 (281)
+.|+.|++|+... +....+. .|...|.+++|+|++ ++++++.|+.+++|+... ...
T Consensus 486 ~~d~~i~iw~~~~------------~~~~~~~-~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~----------~~~ 542 (577)
T 2ymu_A 486 SDDKTVKLWNRNG------------QLLQTLT-GHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG----------QLL 542 (577)
T ss_dssp ETTSEEEEEETTS------------CEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS----------CEE
T ss_pred eCCCEEEEEcCCC------------CEEEEEe-CCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCC----------CEE
Confidence 9999999998542 1122232 478899999999986 688899999999996432 123
Q ss_pred eeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEE
Q 023500 241 KKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 276 (281)
Q Consensus 241 ~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~ 276 (281)
....+|...|++++|+|+++ +|+|++.|+.|++||
T Consensus 543 ~~~~~h~~~v~~~~fs~dg~-~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 543 QTLTGHSSSVWGVAFSPDGQ-TIASASSDKTVKLWN 577 (577)
T ss_dssp EEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEEC
T ss_pred EEEcCCCCCEEEEEEcCCCC-EEEEEeCCCEEEEeC
Confidence 44568999999999999986 577999999999997
No 38
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.5e-37 Score=257.37 Aligned_cols=267 Identities=17% Similarity=0.259 Sum_probs=187.8
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCc-eeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCC
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGD-YECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN 80 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~-~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~ 80 (281)
|...|++++|+|++++|++|+.|+.|++||..++. ..+...+.+|...|.+++|+|++++|++++.|+.|++||+....
T Consensus 54 h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 133 (377)
T 3dwl_C 54 HDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQEN 133 (377)
T ss_dssp CSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC----
T ss_pred CCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcc
Confidence 78899999999999999999999999999987665 34566778899999999999999999999999999999997665
Q ss_pred eeEEeEeecC-CccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCc---------eeeeeeeeccCCccccEEEEE
Q 023500 81 EFECVSVLQG-HAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNW---------HCVQTISESNNGHSSTIWALS 150 (281)
Q Consensus 81 ~~~~~~~~~~-~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~---------~~~~~~~~~~~~h~~~v~~~~ 150 (281)
.......+.+ |...|.+++|+|+++++++++.|++|++|++........ .......... +|...|.+++
T Consensus 134 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~ 212 (377)
T 3dwl_C 134 DWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVG 212 (377)
T ss_dssp -CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEE
T ss_pred cceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEE
Confidence 3334556666 999999999999999999999999999999853221100 0011122222 7889999999
Q ss_pred EccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecCCCCcEEEEecccCCC
Q 023500 151 FNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDL 230 (281)
Q Consensus 151 ~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 230 (281)
|+|++++|++++.|+.|++||+....... .....+ ..|..++.+++|++++.+++++.++.+.+|.......
T Consensus 213 ~sp~~~~l~~~~~d~~i~iwd~~~~~~~~-------~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~ 284 (377)
T 3dwl_C 213 FSPSGNALAYAGHDSSVTIAYPSAPEQPP-------RALITV-KLSQLPLRSLLWANESAIVAAGYNYSPILLQGNESGW 284 (377)
T ss_dssp ECTTSSCEEEEETTTEEC-CEECSTTSCE-------EECCCE-ECSSSCEEEEEEEETTEEEEEESSSSEEEECCCC---
T ss_pred ECCCCCEEEEEeCCCcEEEEECCCCCCcc-------eeeEee-cCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeCCCce
Confidence 99999999999999999999986543210 001112 2367889999999988655555555555775542110
Q ss_pred c-----CCc---cc-----------------------eee------------eeeccCCCCCeeEEEEcCCCCe---eEE
Q 023500 231 I-----DGP---SY-----------------------KML------------LKKEKAHDMDVNSVQWSPGERR---LLA 264 (281)
Q Consensus 231 ~-----~~~---~~-----------------------~~~------------~~~~~~h~~~v~~~~~~~~~~~---~~~ 264 (281)
. ..+ .. ... ......|...|+++.+.+.+.. .|+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~ 364 (377)
T 3dwl_C 285 AHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFT 364 (377)
T ss_dssp CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEE
T ss_pred EEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEE
Confidence 0 000 00 000 0112349999999997765433 588
Q ss_pred EeCCCCeEEEEEc
Q 023500 265 SASDDGMIKIWEL 277 (281)
Q Consensus 265 s~~~Dg~v~iw~~ 277 (281)
|||.||.|+|||+
T Consensus 365 s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 365 SSGTDGRVVLWTL 377 (377)
T ss_dssp EEETTSEEEEECC
T ss_pred eecCCCcEEEecC
Confidence 9999999999985
No 39
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.6e-35 Score=245.67 Aligned_cols=261 Identities=18% Similarity=0.308 Sum_probs=206.1
Q ss_pred CCccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCC
Q 023500 1 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN 80 (281)
Q Consensus 1 ~h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~ 80 (281)
.|...|++++|+|++++||+|+.|+.|++|+..+++.+.+..+.+|...|.+++|+|++++|++++.|+.|++||+...+
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 85 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT 85 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTE
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCe
Confidence 37899999999999999999999999999999887655788889999999999999999999999999999999997553
Q ss_pred eeEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEE
Q 023500 81 EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 160 (281)
Q Consensus 81 ~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 160 (281)
......+..|...|.+++|+|+++++++++.|+.|++|+++.... .... .....+|...|.+++|+|++.+|++
T Consensus 86 -~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~--~~~~---~~~~~~~~~~i~~~~~~~~~~~l~~ 159 (372)
T 1k8k_C 86 -WKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEND--WWVC---KHIKKPIRSTVLSLDWHPNSVLLAA 159 (372)
T ss_dssp -EEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTT--EEEE---EEECTTCCSCEEEEEECTTSSEEEE
T ss_pred -eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCc--ceee---eeeecccCCCeeEEEEcCCCCEEEE
Confidence 233445577889999999999999999999999999998875431 1111 1222468889999999999999999
Q ss_pred eeCCCcEEEEeCCccccccCCC-------CcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEEecccCCCcC
Q 023500 161 CSDDLTIKIWGADITRMQSGDG-------YASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLID 232 (281)
Q Consensus 161 ~~~d~~i~~w~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~ 232 (281)
++.|+.+++||+.......... .........+. .|...+.++.|++++ ++++++.|+.+++|+.....
T Consensus 160 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~--- 235 (372)
T 1k8k_C 160 GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-SSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM--- 235 (372)
T ss_dssp EETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-CCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTT---
T ss_pred EcCCCCEEEEEcccccccccccccccccccchhhheEecC-CCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCc---
Confidence 9999999999975322111100 00112222222 467889999999876 78889999999999875421
Q ss_pred CccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 233 GPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 233 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
.......|..+|++++|+|++. +++++ .|+.|++|++..
T Consensus 236 ------~~~~~~~~~~~v~~~~~~~~~~-~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 236 ------AVATLASETLPLLAVTFITESS-LVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp ------EEEEEECSSCCEEEEEEEETTE-EEEEE-TTSSCEEEEEET
T ss_pred ------eeEEEccCCCCeEEEEEecCCC-EEEEE-eCCeEEEEEccC
Confidence 2333457888999999999875 56666 899999999875
No 40
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=6.5e-35 Score=246.08 Aligned_cols=255 Identities=14% Similarity=0.197 Sum_probs=196.6
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|...|++++|+|++++|++|+.|+.|++||..+++ ++..+.+|...|.+++|+|++++|++++.|++|++||+..+..
T Consensus 138 h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 215 (420)
T 3vl1_A 138 HVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGS--NPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTT 215 (420)
T ss_dssp SSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC--CCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEE
T ss_pred ccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc--CceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCce
Confidence 78899999999999999999999999999987664 4667889999999999999999999999999999999976543
Q ss_pred eEEeEeecC---C---------------------ccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeee
Q 023500 82 FECVSVLQG---H---------------------AQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISE 137 (281)
Q Consensus 82 ~~~~~~~~~---~---------------------~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~ 137 (281)
+..+.. | ...+.+++|+|++.++++++.|+.|++|++.... ....+
T Consensus 216 ---~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~-----~~~~~-- 285 (420)
T 3vl1_A 216 ---IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKE-----QTIQL-- 285 (420)
T ss_dssp ---EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCC-----EEEEE--
T ss_pred ---eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCc-----eeEEc--
Confidence 333332 2 3456667778999999999999999999986542 22222
Q ss_pred ccCCccccEEEEEEccCCC-EEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecCC
Q 023500 138 SNNGHSSTIWALSFNAKGD-KLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAA 216 (281)
Q Consensus 138 ~~~~h~~~v~~~~~~~~~~-~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 216 (281)
..+|...|.+++|+|++. +|++|+.||.|++||+..... ....+...+...+.++.+.+..++++++.
T Consensus 286 -~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~----------~~~~~~~~~~~~v~~~~~~~~~~l~s~~~ 354 (420)
T 3vl1_A 286 -PSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC----------PVGEFLINEGTPINNVYFAAGALFVSSGF 354 (420)
T ss_dssp -CCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS----------CSEEEEESTTSCEEEEEEETTEEEEEETT
T ss_pred -ccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC----------chhhhhccCCCCceEEEeCCCCEEEEecC
Confidence 236788999999999998 999999999999999864321 12233344677888888877778999999
Q ss_pred CCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCC---eeEEEeCCCCeEEEEEcccC
Q 023500 217 DDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGER---RLLASASDDGMIKIWELANT 280 (281)
Q Consensus 217 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~---~~~~s~~~Dg~v~iw~~~~~ 280 (281)
|+.+++|+.....................|...|.+++|+|+++ .++ +++.+|.+++|++.++
T Consensus 355 d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~-a~g~~g~~~~~~~~~~ 420 (420)
T 3vl1_A 355 DTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVL-EVGKNNFCALYNLSNP 420 (420)
T ss_dssp TEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEE-EEETTTEEEEEESCC-
T ss_pred CccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEE-EEcCCceEEEEeccCC
Confidence 99999998765221110000000112346788999999999987 555 5556899999999864
No 41
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=8.1e-35 Score=242.86 Aligned_cols=257 Identities=13% Similarity=0.164 Sum_probs=193.9
Q ss_pred CccceeEEEEcCCC-CEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcC-CCCEEEEecCCCcEEEEEecCC
Q 023500 2 HTRTVRSCAWSPSG-KLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA-SGTLLATCGRDKSVWIWEVMPG 79 (281)
Q Consensus 2 h~~~i~~~~~~~~~-~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~v~~w~~~~~ 79 (281)
|...|++++|+|++ ++||+|+.|+.|+|||..+++........+|...|.+++|+| ++.+|++++.|+.|++||+..
T Consensus 72 h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~- 150 (383)
T 3ei3_B 72 FDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG- 150 (383)
T ss_dssp CSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-
T ss_pred CCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-
Confidence 77899999999999 999999999999999998776554444457999999999999 789999999999999999974
Q ss_pred CeeEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCC-EE
Q 023500 80 NEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD-KL 158 (281)
Q Consensus 80 ~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l 158 (281)
..........+|...|.+++|+|++.++++++.|+.|++|+++.. .+..+ .+|...|.+++|+|++. +|
T Consensus 151 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~------~~~~~----~~h~~~v~~~~~~~~~~~~l 220 (383)
T 3ei3_B 151 SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGH------EIFKE----KLHKAKVTHAEFNPRCDWLM 220 (383)
T ss_dssp CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSC------EEEEE----ECSSSCEEEEEECSSCTTEE
T ss_pred CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCC------EEEEe----ccCCCcEEEEEECCCCCCEE
Confidence 332223333445588999999999999999999999999998421 23333 36889999999999998 99
Q ss_pred EEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCC-Cc-eeeecCCCCcEEEEecccCCCcC----
Q 023500 159 VSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR-EG-IIASGAADDSVQFFVESKDDLID---- 232 (281)
Q Consensus 159 ~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~-~~~~~~~d~~~~~~~~~~~~~~~---- 232 (281)
++|+.|+.|++||+...... ....... .|...+.++.|++ ++ ++++++.|+.+++|+........
T Consensus 221 ~s~~~d~~i~iwd~~~~~~~-------~~~~~~~--~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 291 (383)
T 3ei3_B 221 ATSSVDATVKLWDLRNIKDK-------NSYIAEM--PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIII 291 (383)
T ss_dssp EEEETTSEEEEEEGGGCCST-------TCEEEEE--ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEE
T ss_pred EEEeCCCEEEEEeCCCCCcc-------cceEEEe--cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccc
Confidence 99999999999998642210 0112222 3778899999998 65 67888889999999865322100
Q ss_pred --------------------------------------Ccc------ceeeeeeccC--CCCCeeEEEEcCCCCeeEEEe
Q 023500 233 --------------------------------------GPS------YKMLLKKEKA--HDMDVNSVQWSPGERRLLASA 266 (281)
Q Consensus 233 --------------------------------------~~~------~~~~~~~~~~--h~~~v~~~~~~~~~~~~~~s~ 266 (281)
+.. .......... |...+..++|+|+++ +|+++
T Consensus 292 ~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~-~l~s~ 370 (383)
T 3ei3_B 292 HPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGD-VLASG 370 (383)
T ss_dssp CCBCCCTTSCCCCCEECSSSSEEEEECBCCTTTCTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSS-EEEEE
T ss_pred ccccccccccceEEeccCCCCceEEEecCCcccccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCcc-EEEEe
Confidence 000 0001112222 566778889999886 57788
Q ss_pred CCCCeEEEEEcccC
Q 023500 267 SDDGMIKIWELANT 280 (281)
Q Consensus 267 ~~Dg~v~iw~~~~~ 280 (281)
+ |+.|+|||+..+
T Consensus 371 s-d~~i~iw~~~~~ 383 (383)
T 3ei3_B 371 M-GFNILIWNREDT 383 (383)
T ss_dssp E-TTEEEEEECC--
T ss_pred c-CCcEEEEecCCC
Confidence 6 999999998764
No 42
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=6.7e-35 Score=261.21 Aligned_cols=245 Identities=26% Similarity=0.404 Sum_probs=195.6
Q ss_pred CccceeEEEEcCCC-CEEEEeeCCCcEEEEecCCCc---eeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEec
Q 023500 2 HTRTVRSCAWSPSG-KLLATASFDATTCIWEDVGGD---YECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVM 77 (281)
Q Consensus 2 h~~~i~~~~~~~~~-~~l~tg~~d~~i~lw~~~~~~---~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~ 77 (281)
|++.|++++|+|++ ++|+||+.|+.|+||+..... ......+.+|...|.+++|+|++++|++|+.|++|++||+.
T Consensus 381 H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~ 460 (694)
T 3dm0_A 381 HTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLA 460 (694)
T ss_dssp CSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 89999999999975 799999999999999976432 12356788999999999999999999999999999999997
Q ss_pred CCCeeEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCC--
Q 023500 78 PGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG-- 155 (281)
Q Consensus 78 ~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-- 155 (281)
.+. +...+.+|...|.+++|+|++.++++++.|++|++|+.... +...+.....+|...|.+++|+|++
T Consensus 461 ~~~---~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~------~~~~~~~~~~~h~~~v~~~~~~~~~~~ 531 (694)
T 3dm0_A 461 AGV---STRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGE------CKYTISEGGEGHRDWVSCVRFSPNTLQ 531 (694)
T ss_dssp TTE---EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSC------EEEEECSSTTSCSSCEEEEEECSCSSS
T ss_pred CCc---ceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCC------cceeeccCCCCCCCcEEEEEEeCCCCc
Confidence 653 45677899999999999999999999999999999976432 2223333345789999999999986
Q ss_pred CEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEEecccCCCcCCc
Q 023500 156 DKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGP 234 (281)
Q Consensus 156 ~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~ 234 (281)
..|++|+.|++|++||+...+ ....+ ..|...|.+++++|++ ++++++.|+.+++|+.....
T Consensus 532 ~~l~s~s~d~~v~vwd~~~~~-----------~~~~~-~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~----- 594 (694)
T 3dm0_A 532 PTIVSASWDKTVKVWNLSNCK-----------LRSTL-AGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK----- 594 (694)
T ss_dssp CEEEEEETTSCEEEEETTTCC-----------EEEEE-CCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTE-----
T ss_pred ceEEEEeCCCeEEEEECCCCc-----------EEEEE-cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc-----
Confidence 589999999999999986332 11222 2478899999999976 68889999999999775421
Q ss_pred cceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 235 SYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 235 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
. +... .+...|++++|+|++. ++++ +.|+.|+|||+..
T Consensus 595 ---~-~~~~-~~~~~v~~~~~sp~~~-~l~~-~~~~~i~iwd~~~ 632 (694)
T 3dm0_A 595 ---K-LYSL-EANSVIHALCFSPNRY-WLCA-ATEHGIKIWDLES 632 (694)
T ss_dssp ---E-EECC-BCSSCEEEEEECSSSS-EEEE-EETTEEEEEETTT
T ss_pred ---e-EEEe-cCCCcEEEEEEcCCCc-EEEE-EcCCCEEEEECCC
Confidence 1 1122 2446799999999864 4544 4577799999864
No 43
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-35 Score=249.54 Aligned_cols=255 Identities=20% Similarity=0.334 Sum_probs=201.1
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCC--ceeeeeeecCCCCCeeEEEEcCC-CCEEEEecCCCcEEEEEecC
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGG--DYECVATLEGHENEVKSVSWNAS-GTLLATCGRDKSVWIWEVMP 78 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~--~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~~~d~~v~~w~~~~ 78 (281)
|...|++++|+|++++|++|+.|+.|++|+.... ....+..+.+|...|.+++|+|+ +.+|++++.|+.|++||+..
T Consensus 66 ~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 145 (416)
T 2pm9_A 66 VDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNK 145 (416)
T ss_dssp CSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTT
T ss_pred cCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCC
Confidence 6788999999999999999999999999998661 12356788899999999999998 89999999999999999976
Q ss_pred CC------eeEEeEeecCCccceeEEEecCC-CCeEEEEecCCeEEEEeCCCCCCCCceeeeeeee--ccCCccccEEEE
Q 023500 79 GN------EFECVSVLQGHAQDVKMVQWHPT-MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISE--SNNGHSSTIWAL 149 (281)
Q Consensus 79 ~~------~~~~~~~~~~~~~~v~~v~~~p~-~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~--~~~~h~~~v~~~ 149 (281)
.. .........+|...|.+++|+|+ +.++++++.|+.|++|++.... .+..+.. ...+|...|.++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~-----~~~~~~~~~~~~~~~~~v~~~ 220 (416)
T 2pm9_A 146 CTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKK-----EVIHLSYTSPNSGIKQQLSVV 220 (416)
T ss_dssp TSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTE-----EEEEECCCCCSSCCCCCEEEE
T ss_pred CccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCC-----cceEEeccccccccCCceEEE
Confidence 54 22222334678899999999999 7899999999999999887542 2222221 112347889999
Q ss_pred EEccCC-CEEEEeeCCC---cEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCC-C-ceeeecCCCCcEEEE
Q 023500 150 SFNAKG-DKLVSCSDDL---TIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR-E-GIIASGAADDSVQFF 223 (281)
Q Consensus 150 ~~~~~~-~~l~s~~~d~---~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~-~~~~~~~~d~~~~~~ 223 (281)
+|+|++ .+|++++.|+ .|++||++..... ...+...|...+.+++|+| + .++++++.|+.+++|
T Consensus 221 ~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~----------~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~w 290 (416)
T 2pm9_A 221 EWHPKNSTRVATATGSDNDPSILIWDLRNANTP----------LQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLW 290 (416)
T ss_dssp EECSSCTTEEEEEECCSSSCCCCEEETTSTTSC----------SBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEE
T ss_pred EECCCCCCEEEEEECCCCCceEEEEeCCCCCCC----------cEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEe
Confidence 999997 6899999998 9999998643210 1111113678899999998 4 478899999999999
Q ss_pred ecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEcccC
Q 023500 224 VESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANT 280 (281)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~~ 280 (281)
+.... ........|...|++++|+|+++.+|++++.|+.|+||++...
T Consensus 291 d~~~~---------~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 291 NPESA---------EQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp CSSSC---------CEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCC
T ss_pred eCCCC---------ccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCC
Confidence 76532 1233445788999999999988568899999999999998753
No 44
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.3e-34 Score=253.72 Aligned_cols=236 Identities=33% Similarity=0.603 Sum_probs=196.7
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|...|++++|+|++++|++++.|+.|++|+..+. .+..+.+|...|.+++|+|++++|++++.|+.|++|+.. +
T Consensus 302 h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~---~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~-~-- 375 (577)
T 2ymu_A 302 HSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ---HLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-G-- 375 (577)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC---EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-C--
T ss_pred CCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC---eeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCC-C--
Confidence 7789999999999999999999999999997654 345678899999999999999999999999999999953 3
Q ss_pred eEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEe
Q 023500 82 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 161 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 161 (281)
+.+..+.+|...|++++|+|+++++++++.|+.|++|+... +.+..+ .+|...|++++|+|++++|+++
T Consensus 376 -~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~------~~~~~~----~~~~~~v~~~~~s~d~~~l~~~ 444 (577)
T 2ymu_A 376 -QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG------QLLQTL----TGHSSSVWGVAFSPDDQTIASA 444 (577)
T ss_dssp -CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTC------CEEEEE----ECCSSCEEEEEECTTSSEEEEE
T ss_pred -CEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCC------CEEEEe----cCCCCCeEEEEECCCCCEEEEE
Confidence 24566788999999999999999999999999999997432 122323 3688999999999999999999
Q ss_pred eCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEEecccCCCcCCccceeee
Q 023500 162 SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLL 240 (281)
Q Consensus 162 ~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 240 (281)
+.|+.|++|+.... ....+. .|...+.+++|+|++ ++++++.|+.+++|+... ...
T Consensus 445 ~~d~~v~~w~~~~~------------~~~~~~-~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~----------~~~ 501 (577)
T 2ymu_A 445 SDDKTVKLWNRNGQ------------LLQTLT-GHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG----------QLL 501 (577)
T ss_dssp ETTSEEEEEETTSC------------EEEEEE-CCSSCEEEEEECTTSCEEEEEETTSEEEEEETTS----------CEE
T ss_pred cCCCEEEEEECCCC------------EEEEEc-CCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCC----------CEE
Confidence 99999999986421 112222 477889999999986 678888999999997532 123
Q ss_pred eeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEcc
Q 023500 241 KKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 278 (281)
Q Consensus 241 ~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~ 278 (281)
....+|...|++++|+|+++ +|++++.||.|+|||..
T Consensus 502 ~~~~~h~~~v~~l~~s~dg~-~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 502 QTLTGHSSSVRGVAFSPDGQ-TIASASDDKTVKLWNRN 538 (577)
T ss_dssp EEEECCSSCEEEEEECTTSS-CEEEEETTSEEEEECTT
T ss_pred EEEeCCCCCEEEEEEcCCCC-EEEEEECcCEEEEEeCC
Confidence 44568999999999999886 57899999999999964
No 45
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=3.2e-35 Score=249.23 Aligned_cols=261 Identities=23% Similarity=0.467 Sum_probs=204.7
Q ss_pred CccceeEEEEcCC-CCEEEEeeCCCcEEEEecCC--------CceeeeeeecCCCCCeeEEEEcCCCC-EEEEecCCCcE
Q 023500 2 HTRTVRSCAWSPS-GKLLATASFDATTCIWEDVG--------GDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSV 71 (281)
Q Consensus 2 h~~~i~~~~~~~~-~~~l~tg~~d~~i~lw~~~~--------~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~v 71 (281)
|.+.|++++|+|+ +.+||+|+.||.|++|+... +...++..+.+|...|.+++|+|++. +|++|+.|++|
T Consensus 127 h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i 206 (430)
T 2xyi_A 127 HEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTI 206 (430)
T ss_dssp ESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCE
T ss_pred CCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeE
Confidence 7789999999997 68999999999999999864 22345678889999999999999988 99999999999
Q ss_pred EEEEecCCCe----eEEeEeecCCccceeEEEecC-CCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccE
Q 023500 72 WIWEVMPGNE----FECVSVLQGHAQDVKMVQWHP-TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTI 146 (281)
Q Consensus 72 ~~w~~~~~~~----~~~~~~~~~~~~~v~~v~~~p-~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v 146 (281)
++|++..... ......+.+|...|.+++|+| ++.++++++.|+.|++|++...... +.+..+ .+|...|
T Consensus 207 ~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~--~~~~~~----~~~~~~v 280 (430)
T 2xyi_A 207 CLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTS--KPSHTV----DAHTAEV 280 (430)
T ss_dssp EEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSS--SCSEEE----ECCSSCE
T ss_pred EEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCC--cceeEe----ecCCCCe
Confidence 9999976321 223456778999999999999 6778999999999999998754211 112222 2688899
Q ss_pred EEEEEccCCC-EEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc--eeeecCCCCcEEEE
Q 023500 147 WALSFNAKGD-KLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGAADDSVQFF 223 (281)
Q Consensus 147 ~~~~~~~~~~-~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~d~~~~~~ 223 (281)
.+++|+|++. +|++|+.||.|++||++... .....+. .|...+.++.|+|++ ++++++.|+.+++|
T Consensus 281 ~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~----------~~~~~~~-~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iw 349 (430)
T 2xyi_A 281 NCLSFNPYSEFILATGSADKTVALWDLRNLK----------LKLHSFE-SHKDEIFQVQWSPHNETILASSGTDRRLHVW 349 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCTT----------SCSEEEE-CCSSCEEEEEECSSCTTEEEEEETTSCCEEE
T ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC----------CCeEEee-cCCCCEEEEEECCCCCCEEEEEeCCCcEEEE
Confidence 9999999987 68899999999999986421 1122222 377899999999976 58899999999999
Q ss_pred ecccCCCcCCc-----cceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 224 VESKDDLIDGP-----SYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 224 ~~~~~~~~~~~-----~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
+.......... .....+....+|...|++++|+|+++.++++++.||.|+||++..
T Consensus 350 d~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 350 DLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp EGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred eCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 88653211100 001234455678999999999999876899999999999999864
No 46
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.3e-35 Score=243.90 Aligned_cols=263 Identities=18% Similarity=0.324 Sum_probs=197.1
Q ss_pred CccceeEEEEcCC----CCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcC-CCCEEEEecCCCcEEEEEe
Q 023500 2 HTRTVRSCAWSPS----GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA-SGTLLATCGRDKSVWIWEV 76 (281)
Q Consensus 2 h~~~i~~~~~~~~----~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~v~~w~~ 76 (281)
|...|++++|+|+ +++|++|+.|+.|++||..+++ .+..+.+|...|.+++|+| ++.+|++++.|+.|++||+
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~ 145 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQ--CIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNI 145 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCC--EEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhce--EeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEe
Confidence 5678999999999 6799999999999999987664 4667889999999999999 8999999999999999999
Q ss_pred cCCCeeEEeEee---cCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCc-------------------eeeee
Q 023500 77 MPGNEFECVSVL---QGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNW-------------------HCVQT 134 (281)
Q Consensus 77 ~~~~~~~~~~~~---~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~-------------------~~~~~ 134 (281)
..+.. ...+ .+|...|.+++|+|++.++++++.|+.|++|++........ .....
T Consensus 146 ~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (366)
T 3k26_A 146 QTDTL---VAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFP 222 (366)
T ss_dssp TTTEE---EEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCC
T ss_pred ecCeE---EEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccC
Confidence 76543 3444 68999999999999999999999999999999875311000 00000
Q ss_pred eeeccCCccccEEEEEEccCCCEEEEeeCCCcEEEEeCCccccccCC---CCcccceeEEeecccCcceEEEEeCCC--c
Q 023500 135 ISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD---GYASWRHLCTISGYHDRTIFSVHWSRE--G 209 (281)
Q Consensus 135 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~~--~ 209 (281)
......+|...|.+++|+ +++|++++.|+.|++||.......... ..........+ ..|...+.++.|+++ +
T Consensus 223 ~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~ 299 (366)
T 3k26_A 223 DFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRF-DYSQCDIWYMRFSMDFWQ 299 (366)
T ss_dssp SEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEE-ECSSCCSSCCCCEECTTS
T ss_pred ccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccc-cccCCcEEEEEEcCCCCC
Confidence 011123488999999998 679999999999999997644321110 00011112222 246677888888876 4
Q ss_pred -eeeecCCCCcEEEEecccCCCcCCccceeeeeeccCC--CCCeeEEEEcCCCCeeEEEeCCCCeEEEEEcc
Q 023500 210 -IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAH--DMDVNSVQWSPGERRLLASASDDGMIKIWELA 278 (281)
Q Consensus 210 -~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~ 278 (281)
++++++.|+.+++|+....... .........| ...|++++|+|+++ +|++++.||.|+|||+.
T Consensus 300 ~~l~~~~~dg~i~vwd~~~~~~~-----~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 300 KMLALGNQVGKLYVWDLEVEDPH-----KAKCTTLTHHKCGAAIRQTSFSRDSS-ILIAVCDDASIWRWDRL 365 (366)
T ss_dssp SEEEEECTTSCEEEEECCSSSGG-----GCEEEEECCTTCCSCEEEEEECTTSS-EEEEEETTSEEEEEEC-
T ss_pred cEEEEEecCCcEEEEECCCCCCc-----cccceEEcccccCCceEEEEeCCCCC-eEEEEeCCCEEEEEEec
Confidence 6888999999999987653221 1122233344 78999999999875 67899999999999985
No 47
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.4e-35 Score=263.69 Aligned_cols=257 Identities=26% Similarity=0.391 Sum_probs=207.7
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCC--CCEEEEecCCCcEEEEEecCC
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS--GTLLATCGRDKSVWIWEVMPG 79 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~--~~~l~s~~~d~~v~~w~~~~~ 79 (281)
|.+.|++++|+|+|++|++|+.||.|+||+..++....+..+.+|.+.|++++|+|+ +++|++|+.||+|++||+..+
T Consensus 8 H~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~ 87 (753)
T 3jro_A 8 HNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG 87 (753)
T ss_dssp CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETT
T ss_pred CcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCC
Confidence 889999999999999999999999999999876666678889999999999999987 999999999999999999765
Q ss_pred CeeEEeEeecCCccceeEEEecCC--CCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEcc----
Q 023500 80 NEFECVSVLQGHAQDVKMVQWHPT--MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNA---- 153 (281)
Q Consensus 80 ~~~~~~~~~~~~~~~v~~v~~~p~--~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---- 153 (281)
. ......+.+|...|.+++|+|+ ++.+++++.|+.|++|++....... ... ..+|...|.+++|+|
T Consensus 88 ~-~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~---~~~----~~~~~~~v~~l~~~p~~~~ 159 (753)
T 3jro_A 88 R-WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTS---PII----IDAHAIGVNSASWAPATIE 159 (753)
T ss_dssp E-EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCC---CEE----EECCSSCEEEEEECCCC--
T ss_pred c-ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcc---eeE----eecCCCceEEEEecCcccc
Confidence 3 3356677889999999999999 8999999999999999987653211 111 236888999999999
Q ss_pred ---------CCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCC---c-eeeecCCCCcE
Q 023500 154 ---------KGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE---G-IIASGAADDSV 220 (281)
Q Consensus 154 ---------~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~-~~~~~~~d~~~ 220 (281)
++..|++|+.||.|++||....... ......+ ..|..+|.+++|+|+ + ++++++.|+.+
T Consensus 160 ~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~-------~~~~~~~-~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I 231 (753)
T 3jro_A 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT-------YVLESTL-EGHSDWVRDVAWSPTVLLRSYLASVSQDRTC 231 (753)
T ss_dssp -------CGGGCCEEEEETTSCEEEEEEETTTTE-------EEEEEEE-CCCSSCEEEEEECCCCSSSEEEEEEESSSCE
T ss_pred cccccccCCCCCEEEEEECCCeEEEEeccCCccc-------ceeeeee-cCCCCcEEEEEeccCCCCCCEEEEEecCCEE
Confidence 5889999999999999987643211 1122222 347889999999987 4 68899999999
Q ss_pred EEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 221 QFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
++|+....... ..........|...|++++|+|+++ ++++++.||.|++|++..
T Consensus 232 ~iwd~~~~~~~----~~~~~~~~~~~~~~v~~l~~spdg~-~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 232 IIWTQDNEQGP----WKKTLLKEEKFPDVLWRASWSLSGN-VLALSGGDNKVTLWKENL 285 (753)
T ss_dssp EEEEESSSSSC----CBCCBSSSSCCSSCCCCEEECTTTC-CEEEECSSSCEECCBCCS
T ss_pred EEecCCCCCCc----ceeEEeccCCCCCceEEEEEcCCCC-EEEEEcCCCEEEEEecCC
Confidence 99987653211 0111223356888999999999876 578999999999999863
No 48
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=7.1e-34 Score=232.39 Aligned_cols=240 Identities=17% Similarity=0.296 Sum_probs=198.5
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|...|++++|+|++++|++|+.|+.|++||..+++......+.+|...|.+++|+|++++|++++.|+.|++||+...+
T Consensus 96 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~- 174 (337)
T 1gxr_A 96 RDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT- 174 (337)
T ss_dssp TTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-
T ss_pred CCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCc-
Confidence 6678999999999999999999999999999877655667788899999999999999999999999999999997553
Q ss_pred eEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEe
Q 023500 82 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 161 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 161 (281)
....+.+|...+.+++|+|+++.+++++.|+.|++|++.... .+..+ .|...+.+++|+|++++|+++
T Consensus 175 --~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~-----~~~~~-----~~~~~v~~~~~s~~~~~l~~~ 242 (337)
T 1gxr_A 175 --LVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGR-----QLQQH-----DFTSQIFSLGYCPTGEWLAVG 242 (337)
T ss_dssp --EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE-----EEEEE-----ECSSCEEEEEECTTSSEEEEE
T ss_pred --eeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCc-----eEeee-----cCCCceEEEEECCCCCEEEEE
Confidence 456778899999999999999999999999999999887542 22222 256779999999999999999
Q ss_pred eCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEEecccCCCcCCccceeee
Q 023500 162 SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLL 240 (281)
Q Consensus 162 ~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 240 (281)
+.|+.+++||...... .. ...|...+.++.|++++ ++++++.|+.+++|+..... ..
T Consensus 243 ~~~~~i~~~~~~~~~~------------~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~--------~~- 300 (337)
T 1gxr_A 243 MESSNVEVLHVNKPDK------------YQ-LHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA--------SI- 300 (337)
T ss_dssp ETTSCEEEEETTSSCE------------EE-ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC--------EE-
T ss_pred cCCCcEEEEECCCCCe------------EE-EcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCe--------EE-
Confidence 9999999999864321 11 12367889999999876 68888899999999775421 11
Q ss_pred eeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEcc
Q 023500 241 KKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 278 (281)
Q Consensus 241 ~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~ 278 (281)
....|...|++++|+|+++ +|++++.||.|++|++.
T Consensus 301 -~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 301 -FQSKESSSVLSCDISVDDK-YIVTGSGDKKATVYEVI 336 (337)
T ss_dssp -EEEECSSCEEEEEECTTSC-EEEEEETTSCEEEEEEE
T ss_pred -EEecCCCcEEEEEECCCCC-EEEEecCCCeEEEEEEe
Confidence 1234778899999999876 57899999999999975
No 49
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-34 Score=232.88 Aligned_cols=238 Identities=22% Similarity=0.356 Sum_probs=197.1
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|.+.|++++| |++++|++|+.||.|++||..++. ....+..|...|.+++|+|++++|++++.|+.+++|++.....
T Consensus 17 h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~ 93 (313)
T 3odt_A 17 HDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQW--LGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSG 93 (313)
T ss_dssp CSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSE--EEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTT
T ss_pred CCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCE--EEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCC
Confidence 8899999999 999999999999999999986654 4566778999999999999999999999999999999976654
Q ss_pred eEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEcc-CCCEEEE
Q 023500 82 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNA-KGDKLVS 160 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s 160 (281)
......+.+|...|.++.| +++.+++++.|+.|++|+.. .....+ ..|...+.++.|+| ++..+++
T Consensus 94 ~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~~-------~~~~~~----~~~~~~v~~~~~~~~~~~~l~~ 160 (313)
T 3odt_A 94 EDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKEG-------SLVYNL----QAHNASVWDAKVVSFSENKFLT 160 (313)
T ss_dssp SCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETT-------EEEEEE----ECCSSCEEEEEEEETTTTEEEE
T ss_pred CCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcCC-------cEEEec----ccCCCceeEEEEccCCCCEEEE
Confidence 4556677899999999999 56799999999999999711 122222 36788999999998 8899999
Q ss_pred eeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecCCCCcEEEEecccCCCcCCccceeee
Q 023500 161 CSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLL 240 (281)
Q Consensus 161 ~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 240 (281)
++.|+.+++||.. .....+...+...+.++.+++++.+++++.|+.+++|+.... ...
T Consensus 161 ~~~d~~i~i~d~~-------------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~---------~~~ 218 (313)
T 3odt_A 161 ASADKTIKLWQND-------------KVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTG---------DVL 218 (313)
T ss_dssp EETTSCEEEEETT-------------EEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTC---------CEE
T ss_pred EECCCCEEEEecC-------------ceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCch---------hhh
Confidence 9999999999843 222333334778899999999988999999999999977542 123
Q ss_pred eeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 241 KKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 241 ~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
.....|..+|++++|+|++ . +++++.||.|++||+..
T Consensus 219 ~~~~~~~~~i~~~~~~~~~-~-l~~~~~dg~v~iwd~~~ 255 (313)
T 3odt_A 219 RTYEGHESFVYCIKLLPNG-D-IVSCGEDRTVRIWSKEN 255 (313)
T ss_dssp EEEECCSSCEEEEEECTTS-C-EEEEETTSEEEEECTTT
T ss_pred hhhhcCCceEEEEEEecCC-C-EEEEecCCEEEEEECCC
Confidence 3445789999999999987 3 67999999999999865
No 50
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5e-34 Score=236.01 Aligned_cols=260 Identities=19% Similarity=0.313 Sum_probs=199.1
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|...|++++|+|++++|++|+.|+.|++||..+++ .+..+.+|...|.+++|+|++++|++++.|+.|++||+..+..
T Consensus 31 h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 108 (369)
T 3zwl_B 31 HERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGE--RLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQC 108 (369)
T ss_dssp CSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCC--EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCE
T ss_pred eeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCch--hhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 88999999999999999999999999999987664 4678889999999999999999999999999999999976653
Q ss_pred eEEeEeecCCccceeEEEecCCCCeEEEEecC-----CeEEEEeCCCCCCCCceeeee--eeeccCCccc--cEEEEEEc
Q 023500 82 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYD-----NTIKVWWAEDTDSDNWHCVQT--ISESNNGHSS--TIWALSFN 152 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d-----~~v~~w~~~~~~~~~~~~~~~--~~~~~~~h~~--~v~~~~~~ 152 (281)
...+. +...+.+++|+|++.++++++.+ +.|++|++............. .......|.. .+.+++|+
T Consensus 109 ---~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (369)
T 3zwl_B 109 ---VATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWS 184 (369)
T ss_dssp ---EEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEEC
T ss_pred ---EEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEc
Confidence 33344 77789999999999999999999 999999986543211100000 0001123444 89999999
Q ss_pred cCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEEecccCCCc
Q 023500 153 AKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLI 231 (281)
Q Consensus 153 ~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~ 231 (281)
|++.+|++++.||.|++||+.... .....+ ..|...+.++.|++++ ++++++.|+.+++|+.......
T Consensus 185 ~~~~~l~~~~~dg~i~i~d~~~~~----------~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 253 (369)
T 3zwl_B 185 TKGKYIIAGHKDGKISKYDVSNNY----------EYVDSI-DLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVL 253 (369)
T ss_dssp GGGCEEEEEETTSEEEEEETTTTT----------EEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCCEEEEEcCCCEEEEEECCCCc----------EeEEEE-ecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCcee
Confidence 999999999999999999986411 112222 2367889999999876 5788889999999987542211
Q ss_pred CC-------------cc---------------------------------ceeeeeeccCCCCCeeEEEEcCCCCeeEEE
Q 023500 232 DG-------------PS---------------------------------YKMLLKKEKAHDMDVNSVQWSPGERRLLAS 265 (281)
Q Consensus 232 ~~-------------~~---------------------------------~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s 265 (281)
.. +. ..........|...|++++|+|+++ +|++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s 332 (369)
T 3zwl_B 254 KKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGT-SYAS 332 (369)
T ss_dssp EEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSS-EEEE
T ss_pred eeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCC-EEEE
Confidence 00 00 0001122356889999999999875 6889
Q ss_pred eCCCCeEEEEEccc
Q 023500 266 ASDDGMIKIWELAN 279 (281)
Q Consensus 266 ~~~Dg~v~iw~~~~ 279 (281)
++.||.|+||++..
T Consensus 333 ~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 333 GGEDGFIRLHHFEK 346 (369)
T ss_dssp EETTSEEEEEEECH
T ss_pred EcCCCeEEEEECcc
Confidence 99999999999864
No 51
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=5.9e-34 Score=232.87 Aligned_cols=243 Identities=21% Similarity=0.337 Sum_probs=196.9
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCce-eeeeeec--CCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecC
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDY-ECVATLE--GHENEVKSVSWNASGTLLATCGRDKSVWIWEVMP 78 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~-~~~~~~~--~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~ 78 (281)
|...|++++|+|++++|++++ |+.|++|+..++.. .....+. +|...|.+++|+|++++|++++.|+.|++||+..
T Consensus 50 h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 128 (337)
T 1gxr_A 50 HGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAA 128 (337)
T ss_dssp CSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCC
T ss_pred CCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCC
Confidence 788999999999999999999 99999999865432 2233333 7999999999999999999999999999999976
Q ss_pred CCeeEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEE
Q 023500 79 GNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKL 158 (281)
Q Consensus 79 ~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 158 (281)
... .....+..|...+.+++|+|+++++++++.|+.|++|+++... .+..+ .+|...+.+++|+|++.+|
T Consensus 129 ~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~-----~~~~~----~~~~~~i~~~~~~~~~~~l 198 (337)
T 1gxr_A 129 PTP-RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT-----LVRQF----QGHTDGASCIDISNDGTKL 198 (337)
T ss_dssp C---EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-----EEEEE----CCCSSCEEEEEECTTSSEE
T ss_pred CCc-ceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCc-----eeeee----ecccCceEEEEECCCCCEE
Confidence 542 3455677899999999999999999999999999999886532 22222 3688899999999999999
Q ss_pred EEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEEecccCCCcCCccce
Q 023500 159 VSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYK 237 (281)
Q Consensus 159 ~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 237 (281)
++++.|+.|++||++..+. .... .+...+.++.|++++ .+++++.++.+++|+.....
T Consensus 199 ~~~~~dg~i~~~d~~~~~~-----------~~~~--~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~-------- 257 (337)
T 1gxr_A 199 WTGGLDNTVRSWDLREGRQ-----------LQQH--DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD-------- 257 (337)
T ss_dssp EEEETTSEEEEEETTTTEE-----------EEEE--ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC--------
T ss_pred EEEecCCcEEEEECCCCce-----------Eeee--cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC--------
Confidence 9999999999999864321 1122 256778999999876 67788889999999775421
Q ss_pred eeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 238 MLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 238 ~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
......|..+|++++|+|+++ ++++++.||.|++|++..
T Consensus 258 --~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~ 296 (337)
T 1gxr_A 258 --KYQLHLHESCVLSLKFAYCGK-WFVSTGKDNLLNAWRTPY 296 (337)
T ss_dssp --EEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTT
T ss_pred --eEEEcCCccceeEEEECCCCC-EEEEecCCCcEEEEECCC
Confidence 123457889999999999876 578999999999999865
No 52
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=6.9e-34 Score=230.86 Aligned_cols=244 Identities=23% Similarity=0.373 Sum_probs=183.5
Q ss_pred eeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeE--
Q 023500 6 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFE-- 83 (281)
Q Consensus 6 i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~-- 83 (281)
.++++|++++ +||+|. |++|+|||..+++......+.+|...|++++|+|++++|++|+.|++|++|++..++...
T Consensus 28 ~~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp CBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe
Confidence 4679999886 777764 999999999888755455566888999999999999999999999999999987543211
Q ss_pred ------------------------------------EeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCC
Q 023500 84 ------------------------------------CVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD 127 (281)
Q Consensus 84 ------------------------------------~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~ 127 (281)
.+..+.+|...+..+.+++++.++++++.|++|++|++......
T Consensus 106 ~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~ 185 (318)
T 4ggc_A 106 TSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG 185 (318)
T ss_dssp ECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTB
T ss_pred cCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCccc
Confidence 12234578888999999999999999999999999998754321
Q ss_pred CceeeeeeeeccCCccccEEEEEEccCCCE---EEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEE
Q 023500 128 NWHCVQTISESNNGHSSTIWALSFNAKGDK---LVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVH 204 (281)
Q Consensus 128 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~---l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 204 (281)
. ........|...|.++.++|.+.. +++++.+++|++|+...... ... ..+...+..+.
T Consensus 186 ~-----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~-----------~~~--~~~~~~v~~~~ 247 (318)
T 4ggc_A 186 W-----VPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC-----------LSA--VDAHSQVCSIL 247 (318)
T ss_dssp S-----CCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCE-----------EEE--EECSSCEEEEE
T ss_pred c-----cceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccc-----------ccc--ccceeeeeeee
Confidence 1 111122356788999999987653 34677899999998764321 111 12456677777
Q ss_pred eCCCc-ee--eecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 205 WSREG-II--ASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 205 ~~~~~-~~--~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
+.+.+ .+ ++++.|+.+++|+.... ..+....+|..+|++++|+|+++ +|+||+.||+|+|||+..
T Consensus 248 ~~~~~~~~~~~sg~~d~~i~iwd~~~~---------~~~~~l~gH~~~V~~l~~spdg~-~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 248 WSPHYKELISGHGFAQNQLVIWKYPTM---------AKVAELKGHTSRVLSLTMSPDGA-TVASAAADETLRLWRCFE 315 (318)
T ss_dssp EETTTTEEEEEECTTTCCEEEEETTTC---------CEEEEECCCSSCEEEEEECTTSS-CEEEEETTTEEEEECCSC
T ss_pred ecccccceEEEEEcCCCEEEEEECCCC---------cEEEEEcCCCCCEEEEEEcCCCC-EEEEEecCCeEEEEECCC
Confidence 77654 22 34558999999977542 22344568999999999999876 688999999999999864
No 53
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.9e-34 Score=238.21 Aligned_cols=203 Identities=16% Similarity=0.130 Sum_probs=149.8
Q ss_pred CCeeEEEEcCCCCEEE--EecCCCcEEEEEecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCC
Q 023500 48 NEVKSVSWNASGTLLA--TCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTD 125 (281)
Q Consensus 48 ~~v~~v~~~~~~~~l~--s~~~d~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~ 125 (281)
..+.+++|+|||++++ +++.|++|++||+.... ++..+ .|...|.+++|+|+++++++++.++ +.+|+.....
T Consensus 134 ~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~---~~~~~-~~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~ 208 (365)
T 4h5i_A 134 DYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLT---EKFEI-ETRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGS 208 (365)
T ss_dssp CCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTE---EEEEE-ECSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCC
T ss_pred cCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCc---EEEEe-CCCCceEEEEEccCCceEEecccee-EEEEEeccCc
Confidence 3467899999999875 55689999999987654 33444 3677899999999999999998655 5555544332
Q ss_pred CCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeCCC----cEEEEeCCccccccCCCCcccceeEEeecccCcceE
Q 023500 126 SDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDL----TIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIF 201 (281)
Q Consensus 126 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~----~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 201 (281)
... .....+|...|.+++|+|++..+++++.|+ .++.|+....... ......+ ..|...|.
T Consensus 209 -----~~~--~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~-------~~~~~~~-~~~~~~V~ 273 (365)
T 4h5i_A 209 -----CIA--RKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTS-------VLRSKQV-TNRFKGIT 273 (365)
T ss_dssp -----EEE--EECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEE-------EEEEEEE-ESSCSCEE
T ss_pred -----cee--eeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceec-------ceeeeee-cCCCCCeE
Confidence 111 112346888999999999999999998887 5777876432211 0111122 24678899
Q ss_pred EEEeCCCc-eeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 202 SVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 202 ~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
+++|+|++ ++++|+.|+.+++|+.... +.+.....+|..+|++++|+|+++ +|+|||.|++||||++..
T Consensus 274 ~~~~Spdg~~lasgs~D~~V~iwd~~~~--------~~~~~~~~gH~~~V~~v~fSpdg~-~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 274 SMDVDMKGELAVLASNDNSIALVKLKDL--------SMSKIFKQAHSFAITEVTISPDST-YVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEEECTTSCEEEEEETTSCEEEEETTTT--------EEEEEETTSSSSCEEEEEECTTSC-EEEEEETTSEEEEEECCT
T ss_pred eEEECCCCCceEEEcCCCEEEEEECCCC--------cEEEEecCcccCCEEEEEECCCCC-EEEEEeCCCeEEEEEcCC
Confidence 99999987 6788999999999977532 222333578999999999999986 688999999999999853
No 54
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=7.2e-34 Score=240.20 Aligned_cols=244 Identities=23% Similarity=0.359 Sum_probs=191.2
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|...|++++|+|+|++||+|+.|+.|+|||..+++ ++..+.+|...+.+++++ +..|++|+.|+.+++||......
T Consensus 146 ~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~--~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~ 221 (420)
T 4gga_A 146 PGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK--RLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEH 221 (420)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSC
T ss_pred CCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCc--EEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccce
Confidence 56789999999999999999999999999988764 577889999999988774 68999999999999999865442
Q ss_pred eEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCC-EEEE
Q 023500 82 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD-KLVS 160 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s 160 (281)
.+..+.+|...+..+.|+|++.++++++.|+.+++|+......... .......|...|.+++|+|.+. .+++
T Consensus 222 --~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~-----~~~~~~~~~~~V~~~~~~p~~~~~la~ 294 (420)
T 4gga_A 222 --HVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWV-----PLQTFTQHQGAVKAVAWCPWQSNVLAT 294 (420)
T ss_dssp --EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSC-----CSEEECCCSSCEEEEEECTTCTTEEEE
T ss_pred --eeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccce-----eeeeecccCCceeeeeeCCCcccEEEE
Confidence 4567789999999999999999999999999999998875432111 1112236788999999999764 5544
Q ss_pred --eeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eee--ecCCCCcEEEEecccCCCcCCcc
Q 023500 161 --CSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIA--SGAADDSVQFFVESKDDLIDGPS 235 (281)
Q Consensus 161 --~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~--~~~~d~~~~~~~~~~~~~~~~~~ 235 (281)
|+.|++|++||+..+.. ...+ .....+.++.|++++ .++ +|..|+.+++|+....
T Consensus 295 ~~gs~D~~I~iwd~~t~~~-----------~~~~--~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~------- 354 (420)
T 4gga_A 295 GGGTSDRHIRIWNVCSGAC-----------LSAV--DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM------- 354 (420)
T ss_dssp EECTTTCEEEEEETTTTEE-----------EEEE--ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC-------
T ss_pred EeecCCCEEEEEeCCcccc-----------ceee--ccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCC-------
Confidence 56899999999864422 1122 234567777777754 333 3457999999976532
Q ss_pred ceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 236 YKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 236 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
..+....+|...|++++|+|++. +|+||+.|++|+|||+..
T Consensus 355 --~~v~~l~gH~~~V~~l~~spdg~-~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 355 --AKVAELKGHTSRVLSLTMSPDGA-TVASAAADETLRLWRCFE 395 (420)
T ss_dssp --CEEEEECCCSSCEEEEEECTTSS-CEEEEETTTEEEEECCSC
T ss_pred --cEEEEEcCCCCCEEEEEEcCCCC-EEEEEecCCeEEEEECCC
Confidence 22345568999999999999886 578999999999999864
No 55
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-35 Score=251.70 Aligned_cols=255 Identities=13% Similarity=0.122 Sum_probs=190.3
Q ss_pred CccceeEEEEcCC------CCEEEEeeCCCcEEEEecCCCce---------eeeeeecCCCCCeeEEEEcCCCCEEEEec
Q 023500 2 HTRTVRSCAWSPS------GKLLATASFDATTCIWEDVGGDY---------ECVATLEGHENEVKSVSWNASGTLLATCG 66 (281)
Q Consensus 2 h~~~i~~~~~~~~------~~~l~tg~~d~~i~lw~~~~~~~---------~~~~~~~~h~~~v~~v~~~~~~~~l~s~~ 66 (281)
|...|+.++|+|+ +.+||+|+.|++|+|||...+.. .+...+.+|...|.+++|+|+ ..|++|+
T Consensus 206 ~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs 284 (524)
T 2j04_B 206 SFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGF 284 (524)
T ss_dssp CCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEE
T ss_pred cCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEe
Confidence 4578999999997 57999999999999999865431 123467889999999999986 4899999
Q ss_pred CCCcEEEEEecCCCeeEEeEeecCCccceeEE--EecCCC-CeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCcc
Q 023500 67 RDKSVWIWEVMPGNEFECVSVLQGHAQDVKMV--QWHPTM-DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHS 143 (281)
Q Consensus 67 ~d~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v--~~~p~~-~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~ 143 (281)
.|++|++||+..+.. +...+.+|...|+++ .|+|++ ++|+|+|.|++|++||+.... +...+. +|.
T Consensus 285 ~DgtV~lWD~~~~~~--~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~-----~~~~~~----~~~ 353 (524)
T 2j04_B 285 KNGFVAEFDLTDPEV--PSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIA-----TTKTTV----SRF 353 (524)
T ss_dssp TTSEEEEEETTBCSS--CSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHH-----HHCEEE----EEC
T ss_pred CCCEEEEEECCCCCC--ceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCC-----cccccc----ccc
Confidence 999999999975532 234577899999999 578887 899999999999999875431 222221 232
Q ss_pred --ccEEEEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcE
Q 023500 144 --STIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSV 220 (281)
Q Consensus 144 --~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~ 220 (281)
..|.+++|+|++..+++++.|++|++||++.... ...+. .|...|.+++|+|++ .+++|+.|+.+
T Consensus 354 ~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~-----------~~~l~-gH~~~V~sva~Sp~g~~l~Sgs~Dgtv 421 (524)
T 2j04_B 354 RGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFA-----------VHPLV-SRETTITAIGVSRLHPMVLAGSADGSL 421 (524)
T ss_dssp SCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTC-----------CEEEE-ECSSCEEEEECCSSCCBCEEEETTTEE
T ss_pred ccCcccceEeCCCcCeEEEeCCCCcEEEEECccccc-----------ceeee-cCCCceEEEEeCCCCCeEEEEECCCEE
Confidence 2478899999999999999999999999864321 12233 378899999999987 68899999999
Q ss_pred EEEecccCCCcC------------------Cccc-----------------eeeeeeccCCCCCeeEEEEcCCCC--eeE
Q 023500 221 QFFVESKDDLID------------------GPSY-----------------KMLLKKEKAHDMDVNSVQWSPGER--RLL 263 (281)
Q Consensus 221 ~~~~~~~~~~~~------------------~~~~-----------------~~~~~~~~~h~~~v~~~~~~~~~~--~~~ 263 (281)
++|+........ .+.. ........+|..+|++++|+|++. .++
T Consensus 422 ~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~l 501 (524)
T 2j04_B 422 IITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCY 501 (524)
T ss_dssp ECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEE
T ss_pred EEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHH
Confidence 999754321110 0000 111223456889999999999863 478
Q ss_pred EEeCCCCeEEEEEcccC
Q 023500 264 ASASDDGMIKIWELANT 280 (281)
Q Consensus 264 ~s~~~Dg~v~iw~~~~~ 280 (281)
|+|+.||.||||++..+
T Consensus 502 Asg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 502 AFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp EEECTTSEEEEEECSCC
T ss_pred HhhccCceEEEEEcccc
Confidence 99999999999998753
No 56
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.1e-34 Score=244.75 Aligned_cols=255 Identities=16% Similarity=0.310 Sum_probs=188.1
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCc---------eeeeeeecCCC------------CCeeEEEEcCCC-
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGD---------YECVATLEGHE------------NEVKSVSWNASG- 59 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~---------~~~~~~~~~h~------------~~v~~v~~~~~~- 59 (281)
|.+.|++++|+|+|++||+|+.||.|+||+..+.. +.+...+.+|. +.|.+++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 45789999999999999999999999999976543 23567888998 889999999998
Q ss_pred -CEEEEecCCCcEEEEEecCCCee------------------------------------EEeEe-ecCCccceeEEEec
Q 023500 60 -TLLATCGRDKSVWIWEVMPGNEF------------------------------------ECVSV-LQGHAQDVKMVQWH 101 (281)
Q Consensus 60 -~~l~s~~~d~~v~~w~~~~~~~~------------------------------------~~~~~-~~~~~~~v~~v~~~ 101 (281)
.+|++++.|++|++|++...... .+... ..+|...|.+++|+
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 186 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN 186 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence 79999999999999998643210 01112 36799999999999
Q ss_pred CCCCeEEEEecCCeEEEEeCCCCCCCCceeeeee---eeccCCccccEEEEEEccCC-CEEEEeeCCCcEEEEeCCcccc
Q 023500 102 PTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTI---SESNNGHSSTIWALSFNAKG-DKLVSCSDDLTIKIWGADITRM 177 (281)
Q Consensus 102 p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~---~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~~w~~~~~~~ 177 (281)
|++++++++ .|++|++|+++... +....+ .....+|...|.+++|+|++ .+|++|+.|+.|++||++....
T Consensus 187 ~~~~~l~s~-~d~~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 187 SDYETYLSA-DDLRINLWHLEITD----RSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp TTSSEEEEE-CSSEEEEEETTEEE----EEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS
T ss_pred CCCCEEEEe-CCCeEEEEECCCCC----ceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc
Confidence 999999998 79999999887421 111111 01234688999999999998 8999999999999999875432
Q ss_pred ccCCCCcccceeEEeec-----------ccCcceEEEEeCCCce-eeecCCCCcEEEEeccc-CCCcCCccceeeeeecc
Q 023500 178 QSGDGYASWRHLCTISG-----------YHDRTIFSVHWSREGI-IASGAADDSVQFFVESK-DDLIDGPSYKMLLKKEK 244 (281)
Q Consensus 178 ~~~~~~~~~~~~~~~~~-----------~~~~~v~~~~~~~~~~-~~~~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 244 (281)
.. .....+.. .|...+.+++|++++. +++++. +.+++|+... ... .....
T Consensus 262 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~---------~~~~~ 324 (447)
T 3dw8_B 262 CD-------RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRP---------VETYQ 324 (447)
T ss_dssp SC-------TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSC---------SCCEE
T ss_pred cc-------ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccc---------cceee
Confidence 10 00111111 1223899999999874 555556 9999998764 211 11122
Q ss_pred CCCC---------------CeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 245 AHDM---------------DVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 245 ~h~~---------------~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
.|.. .+..++|+|+++ +|++++.||.|+|||+..
T Consensus 325 ~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~-~l~s~s~dg~v~iwd~~~ 373 (447)
T 3dw8_B 325 VHEYLRSKLCSLYENDCIFDKFECCWNGSDS-VVMTGSYNNFFRMFDRNT 373 (447)
T ss_dssp SCGGGTTTHHHHHHTSGGGCCCCEEECTTSS-EEEEECSTTEEEEEETTT
T ss_pred ccccccccccccccccccccceEEEECCCCC-EEEEeccCCEEEEEEcCC
Confidence 3322 133499999886 568999999999999864
No 57
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.5e-34 Score=236.16 Aligned_cols=259 Identities=15% Similarity=0.261 Sum_probs=197.2
Q ss_pred CccceeEEEEcCC---CCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEE------cCCCCEEEEecCCCcEE
Q 023500 2 HTRTVRSCAWSPS---GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW------NASGTLLATCGRDKSVW 72 (281)
Q Consensus 2 h~~~i~~~~~~~~---~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~------~~~~~~l~s~~~d~~v~ 72 (281)
|...|++++|+|+ +++|++|+.|+.|++||..++. .++..+.+|...|.++.| +|++++|++++.|+.|+
T Consensus 64 ~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~ 142 (357)
T 3i2n_A 64 KAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPE-MPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVK 142 (357)
T ss_dssp ESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCS-SCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEE
T ss_pred ccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCC-ccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEE
Confidence 6789999999998 6999999999999999987664 246778899999999954 68899999999999999
Q ss_pred EEEecCCCeeEEeEeecCCc----cceeEEE----ecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccc
Q 023500 73 IWEVMPGNEFECVSVLQGHA----QDVKMVQ----WHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 144 (281)
Q Consensus 73 ~w~~~~~~~~~~~~~~~~~~----~~v~~v~----~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~ 144 (281)
+||+..... ....+..|. ..+.++. |+|++.++++++.|+.|++|++.... .... ..|..
T Consensus 143 vwd~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-----~~~~-----~~~~~ 210 (357)
T 3i2n_A 143 VWDPRQKDD--PVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMA-----LRWE-----TNIKN 210 (357)
T ss_dssp EECTTSCSS--CSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTE-----EEEE-----EECSS
T ss_pred EEeCCCCCC--cceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCc-----eeee-----cCCCC
Confidence 999976642 233344333 3788888 78999999999999999999887642 1111 24678
Q ss_pred cEEEEEEcc---CCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc--eeeecCCCCc
Q 023500 145 TIWALSFNA---KGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGAADDS 219 (281)
Q Consensus 145 ~v~~~~~~~---~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~d~~ 219 (281)
.|.+++|+| ++.+|++++.|+.|++||........ .........|...+.++.|+|++ ++++++.|+.
T Consensus 211 ~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 283 (357)
T 3i2n_A 211 GVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTK-------GFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGG 283 (357)
T ss_dssp CEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTT-------EEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSE
T ss_pred ceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCccc-------ceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCc
Confidence 899999999 89999999999999999986433210 00001112478899999999976 5889999999
Q ss_pred EEEEecccCCCcC-----C-----ccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEcccC
Q 023500 220 VQFFVESKDDLID-----G-----PSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANT 280 (281)
Q Consensus 220 ~~~~~~~~~~~~~-----~-----~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~~ 280 (281)
+++|+........ + ......+.....|..+|++++|+|+++.++++++.||.|+||++.+.
T Consensus 284 i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 284 LHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp EEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred EEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 9999876432210 0 00112344566899999999999998765548999999999998753
No 58
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4.7e-34 Score=259.65 Aligned_cols=244 Identities=20% Similarity=0.319 Sum_probs=202.0
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|...|++++|+|+|++||+|+.||.|+|||..++. .+..+.+|...|.+++|+|++++|++++.|+.|++|++..+.
T Consensus 12 h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~- 88 (814)
T 3mkq_A 12 RSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQV--EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE- 88 (814)
T ss_dssp ECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE--EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC-
T ss_pred CCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCc--eEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc-
Confidence 78899999999999999999999999999987764 467788999999999999999999999999999999997664
Q ss_pred eEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEcc-CCCEEEE
Q 023500 82 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNA-KGDKLVS 160 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s 160 (281)
.+..+.+|...|++++|+|++..+++++.|++|++|+++... .....+ .+|...|.+++|+| ++..|++
T Consensus 89 --~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~----~~~~~~----~~~~~~v~~~~~~p~~~~~l~~ 158 (814)
T 3mkq_A 89 --KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW----ALEQTF----EGHEHFVMCVAFNPKDPSTFAS 158 (814)
T ss_dssp --EEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTS----EEEEEE----ECCSSCEEEEEEETTEEEEEEE
T ss_pred --EEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCc----eEEEEE----cCCCCcEEEEEEEcCCCCEEEE
Confidence 356678899999999999999999999999999999886531 122222 36888999999999 7889999
Q ss_pred eeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCC--Cc-eeeecCCCCcEEEEecccCCCcCCccce
Q 023500 161 CSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR--EG-IIASGAADDSVQFFVESKDDLIDGPSYK 237 (281)
Q Consensus 161 ~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 237 (281)
++.||.|++||...... .......+...+.++.|++ ++ .+++++.|+.+++|+....
T Consensus 159 ~~~dg~v~vwd~~~~~~-----------~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~--------- 218 (814)
T 3mkq_A 159 GCLDRTVKVWSLGQSTP-----------NFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK--------- 218 (814)
T ss_dssp EETTSEEEEEETTCSSC-----------SEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTT---------
T ss_pred EeCCCeEEEEECCCCcc-----------eeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCC---------
Confidence 99999999999753321 1222333457788888887 54 7889999999999976532
Q ss_pred eeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 238 MLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 238 ~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
........|...|++++|+|+++ ++++++.||.|++||+..
T Consensus 219 ~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~v~vwd~~~ 259 (814)
T 3mkq_A 219 SCVATLEGHMSNVSFAVFHPTLP-IIISGSEDGTLKIWNSST 259 (814)
T ss_dssp EEEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTT
T ss_pred cEEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCeEEEEECCC
Confidence 12334457889999999999876 678999999999999864
No 59
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=4e-34 Score=235.77 Aligned_cols=254 Identities=19% Similarity=0.325 Sum_probs=193.2
Q ss_pred CccceeEEEEcCCCC-EEEEeeC---CCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCC---CCEEEEecCCCcEEEE
Q 023500 2 HTRTVRSCAWSPSGK-LLATASF---DATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS---GTLLATCGRDKSVWIW 74 (281)
Q Consensus 2 h~~~i~~~~~~~~~~-~l~tg~~---d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~---~~~l~s~~~d~~v~~w 74 (281)
|...|++++|+|+++ ++++|+. |+.|+||+..+++...... .+|...|.+++|+|+ +.+|++|+.|+.|++|
T Consensus 17 h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw 95 (357)
T 3i2n_A 17 FNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLRE-IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIW 95 (357)
T ss_dssp CSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEE-EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEE
T ss_pred CCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceee-ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEE
Confidence 788999999999996 5567766 9999999998776543333 368999999999998 6999999999999999
Q ss_pred EecCCCeeEEeEeecCCccceeEEE------ecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEE
Q 023500 75 EVMPGNEFECVSVLQGHAQDVKMVQ------WHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWA 148 (281)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~v~~v~------~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 148 (281)
|+..... ....+.+|...|.++. |+|+++++++++.|+.|++|++..... .+..+......+...+.+
T Consensus 96 d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~----~~~~~~~~~~~~~~~v~~ 169 (357)
T 3i2n_A 96 NLEAPEM--PVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDD----PVANMEPVQGENKRDCWT 169 (357)
T ss_dssp CTTSCSS--CSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSS----CSEEECCCTTSCCCCEEE
T ss_pred eCCCCCc--cEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCC----cceeccccCCCCCCceEE
Confidence 9976541 3566789999999995 568899999999999999998876431 122222111112347888
Q ss_pred EE----EccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCC---C-ceeeecCCCCcE
Q 023500 149 LS----FNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR---E-GIIASGAADDSV 220 (281)
Q Consensus 149 ~~----~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~-~~~~~~~~d~~~ 220 (281)
+. |+|++.+|++++.|+.|++||++.... .....+...+.++.|+| + ..+++++.|+.+
T Consensus 170 ~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-------------~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i 236 (357)
T 3i2n_A 170 VAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL-------------RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKF 236 (357)
T ss_dssp EEEECCCC-CCCEEEEEETTSEEEEEETTTTEE-------------EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEE
T ss_pred EEEEeccCCCCCEEEEEccCCeEEEEECccCce-------------eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeE
Confidence 88 688999999999999999999864321 11123678899999997 4 578889999999
Q ss_pred EEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 221 QFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
++|+........ .........|...|++++|+|+++.++++++.||.|++||+..
T Consensus 237 ~i~d~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 291 (357)
T 3i2n_A 237 HVFDMRTQHPTK----GFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEY 291 (357)
T ss_dssp EEEEEEEEETTT----EEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEEC
T ss_pred EEEeCcCCCccc----ceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCC
Confidence 999876432211 1111133478999999999998765789999999999999874
No 60
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.8e-35 Score=245.89 Aligned_cols=255 Identities=18% Similarity=0.338 Sum_probs=196.4
Q ss_pred cceeEEEEcCCCC-EEEEe----------eCCCcEEEEecCCCcee-eeeeecCCCCCeeEEEEcCCCCEEEEecCCCcE
Q 023500 4 RTVRSCAWSPSGK-LLATA----------SFDATTCIWEDVGGDYE-CVATLEGHENEVKSVSWNASGTLLATCGRDKSV 71 (281)
Q Consensus 4 ~~i~~~~~~~~~~-~l~tg----------~~d~~i~lw~~~~~~~~-~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v 71 (281)
..|.+++|+|+|+ +||+| +.|+.|+||+..++... ++..+ .|...|.+++|+|++.+|++++.|+.|
T Consensus 13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~v 91 (416)
T 2pm9_A 13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDNGSL 91 (416)
T ss_dssp EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESSSCE
T ss_pred hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccCCeE
Confidence 5688999999997 99999 89999999998765422 23333 588999999999999999999999999
Q ss_pred EEEEecCCCe-eEEeEeecCCccceeEEEecCC-CCeEEEEecCCeEEEEeCCCCCCCCce-eeeeeeeccCCccccEEE
Q 023500 72 WIWEVMPGNE-FECVSVLQGHAQDVKMVQWHPT-MDVLFSCSYDNTIKVWWAEDTDSDNWH-CVQTISESNNGHSSTIWA 148 (281)
Q Consensus 72 ~~w~~~~~~~-~~~~~~~~~~~~~v~~v~~~p~-~~~l~s~s~d~~v~~w~~~~~~~~~~~-~~~~~~~~~~~h~~~v~~ 148 (281)
++|++..... ......+.+|...|.+++|+|+ +.++++++.|+.|++|++......... ....+ ....+|...|.+
T Consensus 92 ~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~v~~ 170 (416)
T 2pm9_A 92 ELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTP-GQSMSSVDEVIS 170 (416)
T ss_dssp EEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCC-CCSCCSSCCCCE
T ss_pred EEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccccc-ccccCCCCCeeE
Confidence 9999976211 1256778899999999999998 889999999999999998765311000 01111 122468889999
Q ss_pred EEEccC-CCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecc-----cCcceEEEEeCCCc--eeeecCCCC--
Q 023500 149 LSFNAK-GDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGY-----HDRTIFSVHWSREG--IIASGAADD-- 218 (281)
Q Consensus 149 ~~~~~~-~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~--~~~~~~~d~-- 218 (281)
++|+|+ +.+|++++.|+.|++||++..+. ...+... |...+.++.|+|++ ++++++.|+
T Consensus 171 ~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~-----------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~ 239 (416)
T 2pm9_A 171 LAWNQSLAHVFASAGSSNFASIWDLKAKKE-----------VIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDND 239 (416)
T ss_dssp EEECSSCTTEEEEESSSSCEEEEETTTTEE-----------EEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSS
T ss_pred EEeCCCCCcEEEEEcCCCCEEEEECCCCCc-----------ceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCC
Confidence 999999 78999999999999999864322 1111111 26789999999975 788888898
Q ss_pred -cEEEEecccCCCcCCccceeeeeecc-CCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 219 -SVQFFVESKDDLIDGPSYKMLLKKEK-AHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 219 -~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
.+++|+..... ....... .|...|++++|+|.+..+|++++.||.|++||+..
T Consensus 240 ~~i~~~d~~~~~--------~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~ 294 (416)
T 2pm9_A 240 PSILIWDLRNAN--------TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES 294 (416)
T ss_dssp CCCCEEETTSTT--------SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSS
T ss_pred ceEEEEeCCCCC--------CCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCC
Confidence 99999876421 1122234 68899999999993345788999999999999864
No 61
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-33 Score=237.48 Aligned_cols=252 Identities=21% Similarity=0.330 Sum_probs=193.9
Q ss_pred CccceeEEEEcCCCC-EEEEeeCCCcEEEEec----CCCce----eeeeeecC----------CCCCeeEEEEcCCCCEE
Q 023500 2 HTRTVRSCAWSPSGK-LLATASFDATTCIWED----VGGDY----ECVATLEG----------HENEVKSVSWNASGTLL 62 (281)
Q Consensus 2 h~~~i~~~~~~~~~~-~l~tg~~d~~i~lw~~----~~~~~----~~~~~~~~----------h~~~v~~v~~~~~~~~l 62 (281)
|.+.|++++|+|+|+ +||+|+.|+.|++|+. .++.. .....+.. |.+.|.+++|+|++++|
T Consensus 44 ~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 123 (425)
T 1r5m_A 44 KLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSI 123 (425)
T ss_dssp ECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEE
T ss_pred ccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEE
Confidence 568999999999999 9999999999999998 66541 01222222 67899999999999999
Q ss_pred EEecCCCcEEEEEecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCc-----ee------
Q 023500 63 ATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNW-----HC------ 131 (281)
Q Consensus 63 ~s~~~d~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~-----~~------ 131 (281)
++++.|+.|++|+. .+. ....+.+|...|.+++|+|+++++++++.|+.|++|++........ ..
T Consensus 124 ~~~~~dg~i~i~~~-~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 199 (425)
T 1r5m_A 124 VTGVENGELRLWNK-TGA---LLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINA 199 (425)
T ss_dssp EEEETTSCEEEEET-TSC---EEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------
T ss_pred EEEeCCCeEEEEeC-CCC---eeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceee
Confidence 99999999999993 332 4566788999999999999999999999999999999865321000 00
Q ss_pred ---------ee---------------------------eeeeccCCccccEEEEEEccCCCEEEEeeCCCcEEEEeCCcc
Q 023500 132 ---------VQ---------------------------TISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT 175 (281)
Q Consensus 132 ---------~~---------------------------~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~ 175 (281)
+. .......+|...|.+++|+|++++|++++.|+.|++||....
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 279 (425)
T 1r5m_A 200 ENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNG 279 (425)
T ss_dssp ------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSB
T ss_pred ccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC
Confidence 00 000112367889999999999999999999999999987643
Q ss_pred ccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEE
Q 023500 176 RMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQW 255 (281)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 255 (281)
.. ...+ ..|...+.++.|++++.+++++.|+.+++|+.... ........|..+|++++|
T Consensus 280 ~~-----------~~~~-~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~---------~~~~~~~~~~~~i~~~~~ 338 (425)
T 1r5m_A 280 NS-----------QNCF-YGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQN---------TLLALSIVDGVPIFAGRI 338 (425)
T ss_dssp SC-----------SEEE-CCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTT---------EEEEEEECTTCCEEEEEE
T ss_pred cc-----------ceEe-cCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCC---------cEeEecccCCccEEEEEE
Confidence 21 1122 23678899999999989999999999999977542 223344578889999999
Q ss_pred cCCCCeeEEEeCCCCeEEEEEccc
Q 023500 256 SPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 256 ~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
+|++. +|++++.||.|++|++..
T Consensus 339 s~~~~-~l~~~~~dg~i~i~~~~~ 361 (425)
T 1r5m_A 339 SQDGQ-KYAVAFMDGQVNVYDLKK 361 (425)
T ss_dssp CTTSS-EEEEEETTSCEEEEECHH
T ss_pred cCCCC-EEEEEECCCeEEEEECCC
Confidence 99875 678999999999999864
No 62
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.3e-33 Score=234.71 Aligned_cols=242 Identities=24% Similarity=0.361 Sum_probs=193.7
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|...|++++|+|++++|++|+.||.|++||..+++ .+..+.+|...|.+++| +++.|++|+.|+.|++||+.....
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~ 208 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQT--KLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANH 208 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--EEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSC
T ss_pred CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCe--EEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcc
Confidence 67889999999999999999999999999987764 46778899999999999 457999999999999999974432
Q ss_pred eEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCC-EEEE
Q 023500 82 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD-KLVS 160 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s 160 (281)
....+.+|...|.+++|+|++.++++++.|+.|++|++.... ....+ .+|...|.+++|+|++. ++++
T Consensus 209 --~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~-----~~~~~----~~~~~~v~~~~~~p~~~~ll~~ 277 (401)
T 4aez_A 209 --QIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSI-----PKFTK----TNHNAAVKAVAWCPWQSNLLAT 277 (401)
T ss_dssp --EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSS-----EEEEE----CCCSSCCCEEEECTTSTTEEEE
T ss_pred --eeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCC-----ccEEe----cCCcceEEEEEECCCCCCEEEE
Confidence 356678899999999999999999999999999999887532 22222 36888999999999764 6666
Q ss_pred ee--CCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCce-eee--cCCCCcEEEEecccCCCcCCcc
Q 023500 161 CS--DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IAS--GAADDSVQFFVESKDDLIDGPS 235 (281)
Q Consensus 161 ~~--~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~--~~~d~~~~~~~~~~~~~~~~~~ 235 (281)
++ .|+.|++||+..... ...+ .+...+.++.|++++. +++ |..|+.+++|+.....
T Consensus 278 ~~gs~d~~i~i~d~~~~~~-----------~~~~--~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~------ 338 (401)
T 4aez_A 278 GGGTMDKQIHFWNAATGAR-----------VNTV--DAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSG------ 338 (401)
T ss_dssp ECCTTTCEEEEEETTTCCE-----------EEEE--ECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTE------
T ss_pred ecCCCCCEEEEEECCCCCE-----------EEEE--eCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCcc------
Confidence 54 799999999864321 2222 2457799999998763 444 5589999999775421
Q ss_pred ceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 236 YKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 236 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
........+|...|++++|+|+++ +|++++.||.|++|++..
T Consensus 339 -~~~~~~~~~h~~~v~~~~~s~dg~-~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 339 -LTKQVDIPAHDTRVLYSALSPDGR-ILSTAASDENLKFWRVYD 380 (401)
T ss_dssp -EEEEEEEECCSSCCCEEEECTTSS-EEEEECTTSEEEEEECCC
T ss_pred -ceeEEEecCCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCC
Confidence 111223457899999999999876 678999999999999865
No 63
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-35 Score=253.53 Aligned_cols=233 Identities=11% Similarity=0.097 Sum_probs=170.2
Q ss_pred EEEEeeCCCcEEEEecCCCceee--eeeecCCCCCeeEEEEcCC------CCEEEEecCCCcEEEEEecCCCee------
Q 023500 17 LLATASFDATTCIWEDVGGDYEC--VATLEGHENEVKSVSWNAS------GTLLATCGRDKSVWIWEVMPGNEF------ 82 (281)
Q Consensus 17 ~l~tg~~d~~i~lw~~~~~~~~~--~~~~~~h~~~v~~v~~~~~------~~~l~s~~~d~~v~~w~~~~~~~~------ 82 (281)
+||+++.|+.|+||+..+++... ...+.+|.+.|++++|+|+ +.+|++++.|++|++||+..+...
T Consensus 175 ~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~ 254 (524)
T 2j04_B 175 MFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKM 254 (524)
T ss_dssp -------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEEC
T ss_pred hhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccccee
Confidence 34456688999999986654321 2446678899999999996 579999999999999999754311
Q ss_pred --EEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEE--EEccCC-CE
Q 023500 83 --ECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWAL--SFNAKG-DK 157 (281)
Q Consensus 83 --~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~--~~~~~~-~~ 157 (281)
.+...+.+|...|++++|+|+ ..|++|+.|++|++||++.... .... ..+|...|.++ .|+|++ .+
T Consensus 255 ~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~----~~~~----~~~H~~~V~sv~~~~s~~g~~~ 325 (524)
T 2j04_B 255 CEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEV----PSFY----DQVHDSYILSVSTAYSDFEDTV 325 (524)
T ss_dssp CCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSS----CSEE----EECSSSCEEEEEEECCTTSCCE
T ss_pred ecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCC----ceEE----eecccccEEEEEEEcCCCCCeE
Confidence 123467789999999999986 4899999999999999875421 1111 23789999999 567887 89
Q ss_pred EEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecc-cCcceEEEEeCCCc-eeeecCCCCcEEEEecccCCCcCCcc
Q 023500 158 LVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGY-HDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPS 235 (281)
Q Consensus 158 l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~ 235 (281)
|++|+.|++|++||++..+.. ..+.+. ....+.+++|+|++ .+++++.|+.+++|+.+... .
T Consensus 326 laS~S~D~tvklWD~~~~~~~-----------~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~-----~ 389 (524)
T 2j04_B 326 VSTVAVDGYFYIFNPKDIATT-----------KTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAF-----A 389 (524)
T ss_dssp EEEEETTSEEEEECGGGHHHH-----------CEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTT-----C
T ss_pred EEEeccCCeEEEEECCCCCcc-----------cccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccc-----c
Confidence 999999999999998643221 111111 11246788999965 68888899999999775421 1
Q ss_pred ceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 236 YKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 236 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
.....+|...|++++|+|+++ +|++|+.||+|+||++..
T Consensus 390 ----~~~l~gH~~~V~sva~Sp~g~-~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 390 ----VHPLVSRETTITAIGVSRLHP-MVLAGSADGSLIITNAAR 428 (524)
T ss_dssp ----CEEEEECSSCEEEEECCSSCC-BCEEEETTTEEECCBSCS
T ss_pred ----ceeeecCCCceEEEEeCCCCC-eEEEEECCCEEEEEechH
Confidence 122346999999999999886 578999999999999754
No 64
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=4.3e-33 Score=234.96 Aligned_cols=243 Identities=15% Similarity=0.154 Sum_probs=189.1
Q ss_pred eeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEEe
Q 023500 6 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECV 85 (281)
Q Consensus 6 i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~ 85 (281)
+....|+|++++||+|+.|+.|++||..++. +...+.+|.+.|.+++|+|++++|++|+.|++|++||+..+.. +
T Consensus 100 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~---~ 174 (420)
T 3vl1_A 100 TAVDTAKLQMRRFILGTTEGDIKVLDSNFNL--QREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSN---P 174 (420)
T ss_dssp EEEEEECSSSCEEEEEETTSCEEEECTTSCE--EEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCC---C
T ss_pred eEEEEEecCCCEEEEEECCCCEEEEeCCCcc--eeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcC---c
Confidence 4445789999999999999999999987654 4566789999999999999999999999999999999976643 4
Q ss_pred EeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCcc---------------------c
Q 023500 86 SVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHS---------------------S 144 (281)
Q Consensus 86 ~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~---------------------~ 144 (281)
..+.+|...|.+++|+|++.++++++.|++|++|++.... .+..+.. ...|. .
T Consensus 175 ~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~-----~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~ 248 (420)
T 3vl1_A 175 RTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGT-----TIHTFNR-KENPHDGVNSIALFVGTDRQLHEISTS 248 (420)
T ss_dssp EEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE-----EEEEECB-TTBTTCCEEEEEEEECCCSSCGGGCCC
T ss_pred eEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCc-----eeEEeec-CCCCCCCccEEEEecCCcceeeecccC
Confidence 5678899999999999999999999999999999987542 2222221 11233 3
Q ss_pred cEEEEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc--eeeecCCCCcEEE
Q 023500 145 TIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGAADDSVQF 222 (281)
Q Consensus 145 ~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~d~~~~~ 222 (281)
.+.+++|+|++++|++|+.||.|++||+.... ........|...+.+++|+|++ ++++++.|+.+++
T Consensus 249 ~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~v 317 (420)
T 3vl1_A 249 KKNNLEFGTYGKYVIAGHVSGVITVHNVFSKE-----------QTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQ 317 (420)
T ss_dssp CCCTTCSSCTTEEEEEEETTSCEEEEETTTCC-----------EEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred cccceEEcCCCCEEEEEcCCCeEEEEECCCCc-----------eeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEE
Confidence 44455567889999999999999999986432 2223333467889999999976 6999999999999
Q ss_pred EecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 223 FVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
|+...... . .......|...|+++.+. ++ .+|++++.|+.|++|++..
T Consensus 318 wd~~~~~~----~---~~~~~~~~~~~v~~~~~~-~~-~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 318 WDLRSPEC----P---VGEFLINEGTPINNVYFA-AG-ALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp EETTCTTS----C---SEEEEESTTSCEEEEEEE-TT-EEEEEETTTEEEEEEEECC
T ss_pred EEcCCCcC----c---hhhhhccCCCCceEEEeC-CC-CEEEEecCCccEEEEeccC
Confidence 98764311 0 111123467788888765 44 4788999999999999865
No 65
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7e-34 Score=241.20 Aligned_cols=257 Identities=14% Similarity=0.177 Sum_probs=186.4
Q ss_pred CccceeEEEEcC-CCCEEEEeeCCCcEEEEecCC---Cc-eeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEe
Q 023500 2 HTRTVRSCAWSP-SGKLLATASFDATTCIWEDVG---GD-YECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEV 76 (281)
Q Consensus 2 h~~~i~~~~~~~-~~~~l~tg~~d~~i~lw~~~~---~~-~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~ 76 (281)
|.+.|++++|+| ++++||+|+.|+.|+|||..+ +. ..+...+ +|...|.+++|+|++.+|++|+.|++|++||+
T Consensus 62 h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~ 140 (437)
T 3gre_A 62 EPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKV 140 (437)
T ss_dssp TTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEE
T ss_pred CCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEe
Confidence 789999999999 999999999999999999754 32 2223333 49999999999999999999999999999999
Q ss_pred c---CCCeeE-----EeEeec--C--CccceeEEE--ecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCc
Q 023500 77 M---PGNEFE-----CVSVLQ--G--HAQDVKMVQ--WHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGH 142 (281)
Q Consensus 77 ~---~~~~~~-----~~~~~~--~--~~~~v~~v~--~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h 142 (281)
. .+.... .+..+. . +...+.++. ++|++.++++++.|+.|++|++.... ++..+.. ..|
T Consensus 141 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-----~~~~~~~--~~h 213 (437)
T 3gre_A 141 NHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLE-----RLQIIEN--SPR 213 (437)
T ss_dssp EEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCC-----EEEEEEC--CGG
T ss_pred ccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCe-----eeEEEcc--CCC
Confidence 4 332211 111111 1 445566666 56789999999999999999987642 3333321 127
Q ss_pred cccEEEEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeC----CCc-eeeecCCC
Q 023500 143 SSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWS----REG-IIASGAAD 217 (281)
Q Consensus 143 ~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~-~~~~~~~d 217 (281)
...|.+++|+|++.+|++|+.||.|++||++... ....+...+..+|.++.++ +++ ++++++.|
T Consensus 214 ~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~-----------~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~d 282 (437)
T 3gre_A 214 HGAVSSICIDEECCVLILGTTRGIIDIWDIRFNV-----------LIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSK 282 (437)
T ss_dssp GCCEEEEEECTTSCEEEEEETTSCEEEEETTTTE-----------EEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTT
T ss_pred CCceEEEEECCCCCEEEEEcCCCeEEEEEcCCcc-----------EEEEEecCCCCceEEEEeccccCCCccEEEEEcCC
Confidence 8899999999999999999999999999986432 2222222356688899555 445 78899999
Q ss_pred CcEEEEecccCCCcCCc------cceeeee---------ecc--CCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 218 DSVQFFVESKDDLIDGP------SYKMLLK---------KEK--AHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 218 ~~~~~~~~~~~~~~~~~------~~~~~~~---------~~~--~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
+.+++|+.......... .....+. ... .|...|++++|+ ++ .+|++|+.|+.|++||+..
T Consensus 283 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~-~~l~s~~~d~~i~~wd~~~ 359 (437)
T 3gre_A 283 TFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-ND-KILLTDEATSSIVMFSLNE 359 (437)
T ss_dssp EEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TT-EEEEEEGGGTEEEEEETTC
T ss_pred CcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cc-eEEEecCCCCeEEEEECCC
Confidence 99999987643211000 0000000 011 277889999999 45 5788999999999999865
No 66
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.4e-33 Score=231.54 Aligned_cols=255 Identities=13% Similarity=0.096 Sum_probs=192.5
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCc-eeeeeeecCCCCCeeEEEEcCCCC-EEEEecCCCcEEEEEe-cC
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGD-YECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEV-MP 78 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~-~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~v~~w~~-~~ 78 (281)
|.+.|++++|+|++++|++|+.|+.|+||+..++. ......+.+|...|.+++|+|+++ +|++|+.|+.|++|++ ..
T Consensus 10 h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~ 89 (342)
T 1yfq_A 10 PKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGS 89 (342)
T ss_dssp CSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSS
T ss_pred CCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccC
Confidence 78999999999999999999999999999987654 222445568999999999999999 9999999999999999 65
Q ss_pred CCeeEEeEeecC--CccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCC----ceeeeeeeeccCCccccEEEEEEc
Q 023500 79 GNEFECVSVLQG--HAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDN----WHCVQTISESNNGHSSTIWALSFN 152 (281)
Q Consensus 79 ~~~~~~~~~~~~--~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~----~~~~~~~~~~~~~h~~~v~~~~~~ 152 (281)
.. ...+.+ |...|.+++|+| +..+++++.|+.|++|++....... .+++..+ .|...|.+++|+
T Consensus 90 ~~----~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~ 159 (342)
T 1yfq_A 90 PS----FQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT-----KVKNKIFTMDTN 159 (342)
T ss_dssp SS----EEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSS-----SSCCCEEEEEEC
T ss_pred Cc----eEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEE-----eeCCceEEEEec
Confidence 54 255677 999999999999 9999999999999999875411000 1111111 277889999999
Q ss_pred cCCCEEEEeeCCCcEEEEeCCc-cccccCCCCcccceeEEeecccCcceEEEEeCC-Cc-eeeecCCCCcEEEEecccCC
Q 023500 153 AKGDKLVSCSDDLTIKIWGADI-TRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR-EG-IIASGAADDSVQFFVESKDD 229 (281)
Q Consensus 153 ~~~~~l~s~~~d~~i~~w~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~-~~~~~~~d~~~~~~~~~~~~ 229 (281)
|++ +++++.|+.|++||++. ... ........+...+.++.|++ ++ .+++++.|+.+++|+.....
T Consensus 160 ~~~--l~~~~~d~~i~i~d~~~~~~~----------~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~ 227 (342)
T 1yfq_A 160 SSR--LIVGMNNSQVQWFRLPLCEDD----------NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQG 227 (342)
T ss_dssp SSE--EEEEESTTEEEEEESSCCTTC----------CCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTC
T ss_pred CCc--EEEEeCCCeEEEEECCccccc----------cceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCC
Confidence 886 99999999999999864 211 01112224677899999998 54 78888999999999875431
Q ss_pred Cc-CCccceeeeee-----ccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 230 LI-DGPSYKMLLKK-----EKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 230 ~~-~~~~~~~~~~~-----~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
.. .......+... ...|...|++++|+|+++ +|++++.||.|++||+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~vwd~~~ 282 (342)
T 1yfq_A 228 DDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHK-FLYTAGSDGIISCWNLQT 282 (342)
T ss_dssp CSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTC-CEEEEETTSCEEEEETTT
T ss_pred cccccccceeeecccccccccccceeEEEEEEcCCCC-EEEEecCCceEEEEcCcc
Confidence 00 00111111110 012455999999999875 578999999999999864
No 67
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=9.8e-33 Score=231.33 Aligned_cols=264 Identities=16% Similarity=0.239 Sum_probs=195.6
Q ss_pred CccceeEEEEcC-CCCEEEEeeCCCcEEEEecCCCceeeeeee-----------cCCCCCeeEEEEcC-CCCEEEEecCC
Q 023500 2 HTRTVRSCAWSP-SGKLLATASFDATTCIWEDVGGDYECVATL-----------EGHENEVKSVSWNA-SGTLLATCGRD 68 (281)
Q Consensus 2 h~~~i~~~~~~~-~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~-----------~~h~~~v~~v~~~~-~~~~l~s~~~d 68 (281)
|.+.|++++|+| ++++||+|+.||.|++||..++........ .+|...|.+++|+| ++.+|++++.|
T Consensus 42 h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 121 (408)
T 4a11_B 42 HGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD 121 (408)
T ss_dssp CSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT
T ss_pred cCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC
Confidence 889999999999 999999999999999999876543221111 35999999999999 78899999999
Q ss_pred CcEEEEEecCCCeeEEeEeecCCccceeEEEecCCC---CeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCcccc
Q 023500 69 KSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTM---DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSST 145 (281)
Q Consensus 69 ~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~---~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~ 145 (281)
+.|++||+..... ...+. +...+.++.|+|.+ .++++++.|+.|++|++.... .+..+ .+|...
T Consensus 122 ~~i~iwd~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~-----~~~~~----~~~~~~ 188 (408)
T 4a11_B 122 KTLKVWDTNTLQT---ADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS-----CSHIL----QGHRQE 188 (408)
T ss_dssp SEEEEEETTTTEE---EEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSC-----CCEEE----CCCCSC
T ss_pred CeEEEeeCCCCcc---ceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcc-----eeeee----cCCCCc
Confidence 9999999976543 23332 56678999999854 489999999999999987542 12222 368899
Q ss_pred EEEEEEccCCC-EEEEeeCCCcEEEEeCCccccccC--CC--CcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCc
Q 023500 146 IWALSFNAKGD-KLVSCSDDLTIKIWGADITRMQSG--DG--YASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDS 219 (281)
Q Consensus 146 v~~~~~~~~~~-~l~s~~~d~~i~~w~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~ 219 (281)
|.+++|+|++. .|++++.||.|++||++....... .. .............|...+.+++|++++ ++++++.|+.
T Consensus 189 v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 268 (408)
T 4a11_B 189 ILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNR 268 (408)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCe
Confidence 99999999998 589999999999999864321000 00 000000000112367889999999987 6888999999
Q ss_pred EEEEecccCCCcCCc--------------------------------------cceeeeeeccCCCCCeeEEEEcCCCCe
Q 023500 220 VQFFVESKDDLIDGP--------------------------------------SYKMLLKKEKAHDMDVNSVQWSPGERR 261 (281)
Q Consensus 220 ~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~~h~~~v~~~~~~~~~~~ 261 (281)
+++|+.......... ..........+|...|++++|+|+++
T Consensus 269 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~- 347 (408)
T 4a11_B 269 MRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQ- 347 (408)
T ss_dssp EEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTT-
T ss_pred EEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCC-
Confidence 999987653221000 00112334467999999999999875
Q ss_pred eEEEeCCCCeEEEEEccc
Q 023500 262 LLASASDDGMIKIWELAN 279 (281)
Q Consensus 262 ~~~s~~~Dg~v~iw~~~~ 279 (281)
+|++++.||.|++|++..
T Consensus 348 ~l~s~~~dg~i~iw~~~~ 365 (408)
T 4a11_B 348 ELYSGSRDCNILAWVPSL 365 (408)
T ss_dssp EEEEEETTSCEEEEEECC
T ss_pred EEEEECCCCeEEEEeCCC
Confidence 678999999999999875
No 68
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.5e-33 Score=234.64 Aligned_cols=254 Identities=17% Similarity=0.220 Sum_probs=194.3
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCc----eeeeeeecCCCCCeeEEEEcCC----C---CEEEEecCCCc
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGD----YECVATLEGHENEVKSVSWNAS----G---TLLATCGRDKS 70 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~----~~~~~~~~~h~~~v~~v~~~~~----~---~~l~s~~~d~~ 70 (281)
|.+.|++++|+| ++|++|+.|+.|++|+..+.+ ..++..+.+|...|.+++|+|+ + .+|++++.|+.
T Consensus 15 h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~ 92 (397)
T 1sq9_A 15 HDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGD 92 (397)
T ss_dssp SSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSC
T ss_pred hhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCC
Confidence 889999999999 899999999999999987765 3356777899999999999999 9 99999999999
Q ss_pred EEEEEecCCCe--eEEeEeecCC-----ccceeEEEec----CCCCe-EEEEecCCeEEEEeCCC------CCCCCceee
Q 023500 71 VWIWEVMPGNE--FECVSVLQGH-----AQDVKMVQWH----PTMDV-LFSCSYDNTIKVWWAED------TDSDNWHCV 132 (281)
Q Consensus 71 v~~w~~~~~~~--~~~~~~~~~~-----~~~v~~v~~~----p~~~~-l~s~s~d~~v~~w~~~~------~~~~~~~~~ 132 (281)
|++|++..... ......+..| ...|.+++|+ |++.. +++++.|+.|++|++.. .....+...
T Consensus 93 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 172 (397)
T 1sq9_A 93 LLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPT 172 (397)
T ss_dssp EEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCE
T ss_pred EEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCc
Confidence 99999976542 1114556677 5889999999 99999 99999999999999876 221111110
Q ss_pred eeee---eccCCccccEEEEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeec--cc---CcceEEEE
Q 023500 133 QTIS---ESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISG--YH---DRTIFSVH 204 (281)
Q Consensus 133 ~~~~---~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~v~~~~ 204 (281)
..+. .....|...|.+++|+|++ .|++++.|+.|++||+...+ ....+.. .| ...+.++.
T Consensus 173 ~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~-----------~~~~~~~~~~h~~~~~~i~~i~ 240 (397)
T 1sq9_A 173 LELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLR-----------PLYNFESQHSMINNSNSIRSVK 240 (397)
T ss_dssp EEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTE-----------EEEEEECCC---CCCCCEEEEE
T ss_pred ceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCc-----------eeEEEeccccccccCCccceEE
Confidence 0221 0113477889999999999 99999999999999986432 2222221 15 77899999
Q ss_pred eCCCc-eeeecCCC---CcEEEEecccCCCcCCccceeeeeeccC-------------CCCCeeEEEEcCCCCeeEEEeC
Q 023500 205 WSREG-IIASGAAD---DSVQFFVESKDDLIDGPSYKMLLKKEKA-------------HDMDVNSVQWSPGERRLLASAS 267 (281)
Q Consensus 205 ~~~~~-~~~~~~~d---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------h~~~v~~~~~~~~~~~~~~s~~ 267 (281)
|++++ ++++++.| +.+++|+..... ....... |...|++++|+|++. +|++++
T Consensus 241 ~~~~~~~l~~~~~d~~~g~i~i~d~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~ 310 (397)
T 1sq9_A 241 FSPQGSLLAIAHDSNSFGCITLYETEFGE---------RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE-TLCSAG 310 (397)
T ss_dssp ECSSTTEEEEEEEETTEEEEEEEETTTCC---------EEEEECBC--------CCBSBSSCEEEEEECSSSS-EEEEEE
T ss_pred ECCCCCEEEEEecCCCCceEEEEECCCCc---------ccceeccCcccccccccccccCCcEEEEEECCCCC-EEEEEe
Confidence 99876 67788888 999999775421 1222233 889999999999876 678999
Q ss_pred CCCeEEEEEccc
Q 023500 268 DDGMIKIWELAN 279 (281)
Q Consensus 268 ~Dg~v~iw~~~~ 279 (281)
.||.|+|||+..
T Consensus 311 ~dg~i~iwd~~~ 322 (397)
T 1sq9_A 311 WDGKLRFWDVKT 322 (397)
T ss_dssp TTSEEEEEETTT
T ss_pred CCCeEEEEEcCC
Confidence 999999999864
No 69
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3.4e-33 Score=225.44 Aligned_cols=216 Identities=25% Similarity=0.414 Sum_probs=169.7
Q ss_pred eeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEEeEeecCCccceeEEEecCC--CCeEEEEecCCeEEE
Q 023500 41 ATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT--MDVLFSCSYDNTIKV 118 (281)
Q Consensus 41 ~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~--~~~l~s~s~d~~v~~ 118 (281)
..+.+|.+.|++++|+|+|++|++|+.|++|++|++.... ...+..+.+|...|.+++|+|. +++|++++.|++|++
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~-~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGET-HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI 81 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSC-BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCC-cEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence 3567899999999999999999999999999999986432 2346778999999999999864 789999999999999
Q ss_pred EeCCCCCCCCceeeeeeeeccCCccccEEEEEEccC--CCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeeccc
Q 023500 119 WWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK--GDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYH 196 (281)
Q Consensus 119 w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (281)
|+++... ...+.. ..+|...|.+++|+|+ +.+|++++.|+.|++||++..... . ... ...|
T Consensus 82 Wd~~~~~---~~~~~~----~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~--------~-~~~-~~~h 144 (297)
T 2pm7_B 82 WKEENGR---WSQIAV----HAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTT--------S-PII-IDAH 144 (297)
T ss_dssp EEBSSSC---BCCCEE----ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCB--------C-CEE-EECC
T ss_pred EEcCCCc---eEEEEE----eecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCce--------e-eee-eecc
Confidence 9987532 111111 2368899999999997 789999999999999998632110 0 111 2247
Q ss_pred CcceEEEEeCCC--------------ceeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCC--C
Q 023500 197 DRTIFSVHWSRE--------------GIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGE--R 260 (281)
Q Consensus 197 ~~~v~~~~~~~~--------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~ 260 (281)
...+.+++|+|+ .++++++.|+.+++|+..... ..........+|...|++++|+|++ .
T Consensus 145 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~-----~~~~~~~~l~~H~~~V~~v~~sp~~~~~ 219 (297)
T 2pm7_B 145 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA-----QTYVLESTLEGHSDWVRDVAWSPTVLLR 219 (297)
T ss_dssp SSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTT-----TEEEEEEEECCCSSCEEEEEECCCCSSS
T ss_pred cCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCC-----ceEEEEEEecCCCCceEEEEECCCCCCc
Confidence 788999999985 379999999999999875421 1111233456899999999999985 4
Q ss_pred eeEEEeCCCCeEEEEEccc
Q 023500 261 RLLASASDDGMIKIWELAN 279 (281)
Q Consensus 261 ~~~~s~~~Dg~v~iw~~~~ 279 (281)
.+|++++.|+.|+|||+..
T Consensus 220 ~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 220 SYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp EEEEEEETTSCEEEEEESS
T ss_pred eEEEEEECCCcEEEEEeCC
Confidence 6789999999999999864
No 70
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.5e-33 Score=232.50 Aligned_cols=251 Identities=22% Similarity=0.367 Sum_probs=195.5
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|...|++++|+|++++|++|+.|+.|++|+.. + ..+..+.+|...|.+++|+|++++|++++.|+.|++||+..+..
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~-~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 183 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWNKT-G--ALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTV 183 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEETT-S--CEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC-C--CeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcE
Confidence 56799999999999999999999999999933 3 34667889999999999999999999999999999999865432
Q ss_pred eE-----------------------------------------------------EeEeecCCccceeEEEecCCCCeEE
Q 023500 82 FE-----------------------------------------------------CVSVLQGHAQDVKMVQWHPTMDVLF 108 (281)
Q Consensus 82 ~~-----------------------------------------------------~~~~~~~~~~~v~~v~~~p~~~~l~ 108 (281)
.. ....+..|...|.+++|+|++.+++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 263 (425)
T 1r5m_A 184 MQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLL 263 (425)
T ss_dssp EEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEE
T ss_pred EEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEE
Confidence 11 1123456888899999999999999
Q ss_pred EEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccce
Q 023500 109 SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRH 188 (281)
Q Consensus 109 s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~ 188 (281)
+++.|+.|++|++.... ....+ .+|...|.+++|+|++ .+++++.|+.|++||+.... .
T Consensus 264 ~~~~d~~i~i~d~~~~~-----~~~~~----~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~-----------~ 322 (425)
T 1r5m_A 264 SASDDGTLRIWHGGNGN-----SQNCF----YGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNT-----------L 322 (425)
T ss_dssp EEETTSCEEEECSSSBS-----CSEEE----CCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTE-----------E
T ss_pred EEcCCCEEEEEECCCCc-----cceEe----cCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCc-----------E
Confidence 99999999999876532 12222 3578899999999999 99999999999999986432 1
Q ss_pred eEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEEecccCCCcCC-----------ccceeeeeeccCCCC--CeeEEE
Q 023500 189 LCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDG-----------PSYKMLLKKEKAHDM--DVNSVQ 254 (281)
Q Consensus 189 ~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~h~~--~v~~~~ 254 (281)
...+. .+...+.++.|++++ ++++++.|+.+++|+......... +...........|.. .|++++
T Consensus 323 ~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 401 (425)
T 1r5m_A 323 LALSI-VDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLS 401 (425)
T ss_dssp EEEEE-CTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEE
T ss_pred eEecc-cCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEE
Confidence 22222 367789999999876 688888999999998764320000 000013344566765 999999
Q ss_pred EcCCCCeeEEEeCCCCeEEEEEcc
Q 023500 255 WSPGERRLLASASDDGMIKIWELA 278 (281)
Q Consensus 255 ~~~~~~~~~~s~~~Dg~v~iw~~~ 278 (281)
|+|+++ +|++++.||.|++|++.
T Consensus 402 ~s~~~~-~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 402 WNCAGN-KISVAYSLQEGSVVAIP 424 (425)
T ss_dssp ECTTSS-EEEEEESSSCCEEEECC
T ss_pred ccCCCc-eEEEEecCceEEEEeec
Confidence 999886 57899999999999985
No 71
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=7.3e-33 Score=262.24 Aligned_cols=253 Identities=24% Similarity=0.405 Sum_probs=203.5
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|.+.|++++|+|+|++||+|+.|+.|++||..+++ .+..+.+|.+.|.+++|+|+|++|++++.|++|++||+..+.
T Consensus 614 h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~--~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~- 690 (1249)
T 3sfz_A 614 HTDAVYHACFSQDGQRIASCGADKTLQVFKAETGE--KLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGK- 690 (1249)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC-
T ss_pred ccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCC--EEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCc-
Confidence 78899999999999999999999999999987764 467888999999999999999999999999999999997664
Q ss_pred eEEeEeecCCccceeEEEecCC--CCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEE
Q 023500 82 FECVSVLQGHAQDVKMVQWHPT--MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV 159 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~v~~~p~--~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 159 (281)
.+..+.+|...|.+++|+|+ ..++++++.|+.|++|++.... +...+ .+|...|.+++|+|++++|+
T Consensus 691 --~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~-----~~~~~----~~h~~~v~~~~~sp~~~~l~ 759 (1249)
T 3sfz_A 691 --LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE-----CRNTM----FGHTNSVNHCRFSPDDELLA 759 (1249)
T ss_dssp --EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS-----EEEEE----CCCSSCEEEEEECSSTTEEE
T ss_pred --eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc-----hhhee----cCCCCCEEEEEEecCCCEEE
Confidence 46677899999999999995 4589999999999999887542 23333 37899999999999999999
Q ss_pred EeeCCCcEEEEeCCccccccC----C--------------CC-------------------------cccceeEEeeccc
Q 023500 160 SCSDDLTIKIWGADITRMQSG----D--------------GY-------------------------ASWRHLCTISGYH 196 (281)
Q Consensus 160 s~~~d~~i~~w~~~~~~~~~~----~--------------~~-------------------------~~~~~~~~~~~~~ 196 (281)
+++.||.|++||+........ . .. ............|
T Consensus 760 s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~ 839 (1249)
T 3sfz_A 760 SCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGH 839 (1249)
T ss_dssp EEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSS
T ss_pred EEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCC
Confidence 999999999999764321100 0 00 0000111122245
Q ss_pred CcceEEEEeCCCc-eeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEE
Q 023500 197 DRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 275 (281)
Q Consensus 197 ~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw 275 (281)
...+.++.|++++ .+++++.|+.+++|+.... .......+|...|++++|+|++. .+++++.||.|++|
T Consensus 840 ~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~---------~~~~~~~~h~~~v~~v~~spdg~-~l~s~s~dg~v~vw 909 (1249)
T 3sfz_A 840 HSTIQYCDFSPYDHLAVIALSQYCVELWNIDSR---------LKVADCRGHLSWVHGVMFSPDGS-SFLTASDDQTIRVW 909 (1249)
T ss_dssp SSCCCEEEECSSTTEEEEECSSSCEEEEETTTT---------EEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEE
T ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCC---------ceeeecCCCccceEEEEECCCCC-EEEEEeCCCeEEEE
Confidence 6788889999865 6788889999999977532 22344568999999999999876 57899999999999
Q ss_pred Ecc
Q 023500 276 ELA 278 (281)
Q Consensus 276 ~~~ 278 (281)
++.
T Consensus 910 ~~~ 912 (1249)
T 3sfz_A 910 ETK 912 (1249)
T ss_dssp EHH
T ss_pred Ecc
Confidence 975
No 72
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.3e-32 Score=227.31 Aligned_cols=267 Identities=17% Similarity=0.338 Sum_probs=197.5
Q ss_pred CccceeEEEEcCC----CCEEEEeeCCCcEEEEecCCCce-eeeeeec--CCCCCeeEEEEcCC----CCEEEEecCCCc
Q 023500 2 HTRTVRSCAWSPS----GKLLATASFDATTCIWEDVGGDY-ECVATLE--GHENEVKSVSWNAS----GTLLATCGRDKS 70 (281)
Q Consensus 2 h~~~i~~~~~~~~----~~~l~tg~~d~~i~lw~~~~~~~-~~~~~~~--~h~~~v~~v~~~~~----~~~l~s~~~d~~ 70 (281)
|...|++++|+|+ ...+++++.++.|++|+..++.. ..+.... .|...|.+++|+|+ +.+|++|+.|+.
T Consensus 17 h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~ 96 (366)
T 3k26_A 17 HNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGI 96 (366)
T ss_dssp TCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCE
T ss_pred CCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCE
Confidence 7899999999994 44566666677999999875432 2222222 36788999999998 679999999999
Q ss_pred EEEEEecCCCeeEEeEeecCCccceeEEEecC-CCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEE
Q 023500 71 VWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP-TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWAL 149 (281)
Q Consensus 71 v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p-~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 149 (281)
|++||+..++ .+..+.+|...|.+++|+| +++++++++.|+.|++|++.... .+..+. ...+|...|.++
T Consensus 97 i~v~d~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~-~~~~~~~~v~~~ 167 (366)
T 3k26_A 97 IRIINPITMQ---CIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDT-----LVAIFG-GVEGHRDEVLSA 167 (366)
T ss_dssp EEEECTTTCC---EEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTE-----EEEEEC-STTSCSSCEEEE
T ss_pred EEEEEchhce---EeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCe-----EEEEec-ccccccCceeEE
Confidence 9999987654 3566778999999999999 89999999999999999887542 222221 124688999999
Q ss_pred EEccCCCEEEEeeCCCcEEEEeCCccccccC-----------CCCcc-----cceeEEeecccCcceEEEEeCCCceeee
Q 023500 150 SFNAKGDKLVSCSDDLTIKIWGADITRMQSG-----------DGYAS-----WRHLCTISGYHDRTIFSVHWSREGIIAS 213 (281)
Q Consensus 150 ~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~-----------~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 213 (281)
+|+|++.+|++++.|+.|++||+...+.... ..... ..........|...|.++.|+ ..++++
T Consensus 168 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~ 246 (366)
T 3k26_A 168 DYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-GDLILS 246 (366)
T ss_dssp EECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-TTEEEE
T ss_pred EECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-CCEEEE
Confidence 9999999999999999999999874332100 00000 000011112377889999998 668999
Q ss_pred cCCCCcEEEEecccCCCc-----CCccceeeeeeccCCCCCeeEEEEcCC--CCeeEEEeCCCCeEEEEEccc
Q 023500 214 GAADDSVQFFVESKDDLI-----DGPSYKMLLKKEKAHDMDVNSVQWSPG--ERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 214 ~~~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
++.|+.+++|+....... ..............|...|++++|+|+ +. +|++++.||.|++||+..
T Consensus 247 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~-~l~~~~~dg~i~vwd~~~ 318 (366)
T 3k26_A 247 KSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQK-MLALGNQVGKLYVWDLEV 318 (366)
T ss_dssp ECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSS-EEEEECTTSCEEEEECCS
T ss_pred EecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCc-EEEEEecCCcEEEEECCC
Confidence 999999999987643220 011112234455678899999999998 65 688999999999999875
No 73
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=6.9e-33 Score=232.78 Aligned_cols=248 Identities=21% Similarity=0.391 Sum_probs=192.0
Q ss_pred CccceeEEEEcC-CCCEEEEeeCCCcEEEEecCCCce-----eeeeeecCCCCCeeEEEEcCCC-CEEEEecCCCcEEEE
Q 023500 2 HTRTVRSCAWSP-SGKLLATASFDATTCIWEDVGGDY-----ECVATLEGHENEVKSVSWNASG-TLLATCGRDKSVWIW 74 (281)
Q Consensus 2 h~~~i~~~~~~~-~~~~l~tg~~d~~i~lw~~~~~~~-----~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~v~~w 74 (281)
|...|++++|+| ++++||+|+.|+.|+||+..++.. .++..+.+|...|.+++|+|++ ++|++++.|++|++|
T Consensus 80 h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iw 159 (402)
T 2aq5_A 80 HTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVW 159 (402)
T ss_dssp CSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEE
T ss_pred CCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEE
Confidence 788999999999 999999999999999999876532 3467788999999999999998 699999999999999
Q ss_pred EecCCCeeEEeEee--cCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCcccc-EEEEEE
Q 023500 75 EVMPGNEFECVSVL--QGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSST-IWALSF 151 (281)
Q Consensus 75 ~~~~~~~~~~~~~~--~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~ 151 (281)
|+..+. .+..+ .+|...|.+++|+|++.++++++.|+.|++|++.... .+..+. .+|... +.++.|
T Consensus 160 d~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-----~~~~~~---~~~~~~~~~~~~~ 228 (402)
T 2aq5_A 160 DVGTGA---AVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGT-----VVAEKD---RPHEGTRPVHAVF 228 (402)
T ss_dssp ETTTTE---EEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTE-----EEEEEE---CSSCSSSCCEEEE
T ss_pred ECCCCC---ccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCc-----eeeeec---cCCCCCcceEEEE
Confidence 997653 45566 7899999999999999999999999999999887542 222221 245554 789999
Q ss_pred ccCCCEEEEe---eCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-ee-eecCCCCcEEEEecc
Q 023500 152 NAKGDKLVSC---SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-II-ASGAADDSVQFFVES 226 (281)
Q Consensus 152 ~~~~~~l~s~---~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~-~~~~~d~~~~~~~~~ 226 (281)
+|++.+|++| +.|+.|++||...... ........+...+.++.|++++ .+ ++++.|+.+++|+..
T Consensus 229 ~~~~~~l~~g~~~~~d~~i~iwd~~~~~~----------~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~ 298 (402)
T 2aq5_A 229 VSEGKILTTGFSRMSERQVALWDTKHLEE----------PLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEIT 298 (402)
T ss_dssp CSTTEEEEEEECTTCCEEEEEEETTBCSS----------CSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEEC
T ss_pred cCCCcEEEEeccCCCCceEEEEcCccccC----------CceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEec
Confidence 9999999999 7999999999864321 0111122245678899999876 34 456689999999876
Q ss_pred cCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 227 KDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
... .....+... .|..+|++++|+|++. +++ +.|+.+++|++..
T Consensus 299 ~~~-----~~~~~l~~~-~~~~~v~~~~~sp~~~-~~~--s~~~~~~~~~l~~ 342 (402)
T 2aq5_A 299 SEA-----PFLHYLSMF-SSKESQRGMGYMPKRG-LEV--NKCEIARFYKLHE 342 (402)
T ss_dssp SST-----TCEEEEEEE-CCSSCCSEEEECCGGG-SCG--GGTEEEEEEEEET
T ss_pred CCC-----cceEeeccc-ccCCcccceEEecccc-cce--ecceeEEEEEcCC
Confidence 432 111122222 3678999999999875 343 4577999999864
No 74
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=5.8e-33 Score=232.40 Aligned_cols=251 Identities=15% Similarity=0.196 Sum_probs=192.4
Q ss_pred CccceeEEEEcCC----C---CEEEEeeCCCcEEEEecCCCce---eeeeeecCC-----CCCeeEEEEc----CCCCE-
Q 023500 2 HTRTVRSCAWSPS----G---KLLATASFDATTCIWEDVGGDY---ECVATLEGH-----ENEVKSVSWN----ASGTL- 61 (281)
Q Consensus 2 h~~~i~~~~~~~~----~---~~l~tg~~d~~i~lw~~~~~~~---~~~~~~~~h-----~~~v~~v~~~----~~~~~- 61 (281)
|...|++++|+|+ + ++|++|+.|+.|++|+..++.. .....+.+| ...|.+++|+ |++.+
T Consensus 61 h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 140 (397)
T 1sq9_A 61 HKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHR 140 (397)
T ss_dssp CTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEE
T ss_pred CCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceE
Confidence 7789999999999 9 9999999999999999865541 115566778 5999999999 99999
Q ss_pred EEEecCCCcEEEEEecC------CCeeE--EeEee-------cCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCC
Q 023500 62 LATCGRDKSVWIWEVMP------GNEFE--CVSVL-------QGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDS 126 (281)
Q Consensus 62 l~s~~~d~~v~~w~~~~------~~~~~--~~~~~-------~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~ 126 (281)
|++++.|+.|++||+.. ..... +...+ ..|...|.+++|+|++ ++++++.|+.|++|++...
T Consensus 141 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~-- 217 (397)
T 1sq9_A 141 LVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTL-- 217 (397)
T ss_dssp EEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTT--
T ss_pred EEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCC--
Confidence 99999999999999986 33211 11133 4588899999999999 9999999999999988753
Q ss_pred CCceeeeeeeeccCCc---cccEEEEEEccCCCEEEEeeCC---CcEEEEeCCccccccCCCCcccceeEEeec------
Q 023500 127 DNWHCVQTISESNNGH---SSTIWALSFNAKGDKLVSCSDD---LTIKIWGADITRMQSGDGYASWRHLCTISG------ 194 (281)
Q Consensus 127 ~~~~~~~~~~~~~~~h---~~~v~~~~~~~~~~~l~s~~~d---~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~------ 194 (281)
+.+..+.. ..+| ...|.+++|+|++.+|++++.| +.|++||+...+. ...+..
T Consensus 218 ---~~~~~~~~-~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~-----------~~~~~~~~~~~~ 282 (397)
T 1sq9_A 218 ---RPLYNFES-QHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGER-----------IGSLSVPTHSSQ 282 (397)
T ss_dssp ---EEEEEEEC-CC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCE-----------EEEECBC-----
T ss_pred ---ceeEEEec-cccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcc-----------cceeccCccccc
Confidence 22333321 1127 7889999999999999999999 9999999864321 112211
Q ss_pred ------ccCcceEEEEeCCCc-eeeecCCCCcEEEEecccCCCcCCccceeeeeecc------CC---------------
Q 023500 195 ------YHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEK------AH--------------- 246 (281)
Q Consensus 195 ------~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~------~h--------------- 246 (281)
.|...+.+++|++++ ++++++.|+.+++|+..... ...... .|
T Consensus 283 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---------~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 353 (397)
T 1sq9_A 283 ASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKE---------RITTLNMHCDDIEIEEDILAVDEHGDSLA 353 (397)
T ss_dssp ---CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE---------EEEEEECCGGGCSSGGGCCCBCTTSCBCS
T ss_pred ccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCc---------eeEEEecccCcccchhhhhcccccccccc
Confidence 167889999999875 78888999999999775421 111222 45
Q ss_pred CCCeeEEEEcCCCC---------eeEEEeCCCCeEEEEEccc
Q 023500 247 DMDVNSVQWSPGER---------RLLASASDDGMIKIWELAN 279 (281)
Q Consensus 247 ~~~v~~~~~~~~~~---------~~~~s~~~Dg~v~iw~~~~ 279 (281)
..+|++++|+|+++ .+|++++.||.|++|++..
T Consensus 354 ~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 354 EPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp SCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred CCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 89999999999863 4788999999999999875
No 75
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-32 Score=220.98 Aligned_cols=237 Identities=22% Similarity=0.303 Sum_probs=192.0
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCc-eeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCC
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGD-YECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN 80 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~-~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~ 80 (281)
|...|++++|+|++++|++|+.|+.+++|+..... ......+.+|...|.+++| +++++++++.|+.|++|| ..
T Consensus 58 ~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~- 132 (313)
T 3odt_A 58 GQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EG- 132 (313)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TT-
T ss_pred CCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CC-
Confidence 67889999999999999999999999999975432 2446678899999999999 578999999999999999 22
Q ss_pred eeEEeEeecCCccceeEEEecC-CCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEE
Q 023500 81 EFECVSVLQGHAQDVKMVQWHP-TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV 159 (281)
Q Consensus 81 ~~~~~~~~~~~~~~v~~v~~~p-~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 159 (281)
.....+..|...+.++.|+| +++.+++++.|+.|++|+... ....+. ..|...+.+++|+|++. ++
T Consensus 133 --~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~-------~~~~~~---~~~~~~i~~~~~~~~~~-~~ 199 (313)
T 3odt_A 133 --SLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDK-------VIKTFS---GIHNDVVRHLAVVDDGH-FI 199 (313)
T ss_dssp --EEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTE-------EEEEEC---SSCSSCEEEEEEEETTE-EE
T ss_pred --cEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCc-------eEEEEe---ccCcccEEEEEEcCCCe-EE
Confidence 34566778999999999998 889999999999999997321 222221 23788899999999987 99
Q ss_pred EeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecCCCCcEEEEecccCCCcCCccceee
Q 023500 160 SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKML 239 (281)
Q Consensus 160 s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 239 (281)
+++.|+.|++||.+..+ ....+. .|...+.++.|++++.+++++.|+.+++|+.... ..
T Consensus 200 ~~~~dg~i~i~d~~~~~-----------~~~~~~-~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~---------~~ 258 (313)
T 3odt_A 200 SCSNDGLIKLVDMHTGD-----------VLRTYE-GHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENG---------SL 258 (313)
T ss_dssp EEETTSEEEEEETTTCC-----------EEEEEE-CCSSCEEEEEECTTSCEEEEETTSEEEEECTTTC---------CE
T ss_pred EccCCCeEEEEECCchh-----------hhhhhh-cCCceEEEEEEecCCCEEEEecCCEEEEEECCCC---------ce
Confidence 99999999999986432 222222 4778999999999999999999999999976542 12
Q ss_pred eeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 240 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 240 ~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
......|..+|++++|+|+++ +++++.||.|++|++..
T Consensus 259 ~~~~~~~~~~i~~~~~~~~~~--~~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 259 KQVITLPAISIWSVDCMSNGD--IIVGSSDNLVRIFSQEK 296 (313)
T ss_dssp EEEEECSSSCEEEEEECTTSC--EEEEETTSCEEEEESCG
T ss_pred eEEEeccCceEEEEEEccCCC--EEEEeCCCcEEEEeCCC
Confidence 333456888999999999875 45788899999999875
No 76
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=7.5e-33 Score=228.82 Aligned_cols=254 Identities=16% Similarity=0.251 Sum_probs=186.6
Q ss_pred CccceeEEEEcCC---CCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecC
Q 023500 2 HTRTVRSCAWSPS---GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMP 78 (281)
Q Consensus 2 h~~~i~~~~~~~~---~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~ 78 (281)
|.+.|++++|+|+ |++|++|+.|+.|+||+..+........+.+|...|.+++|+|++++|++++.|+.|++||+..
T Consensus 38 h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 117 (368)
T 3mmy_A 38 PDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSS 117 (368)
T ss_dssp CSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCC
Confidence 7899999999999 6999999999999999987633344467888999999999999999999999999999999976
Q ss_pred CCeeEEeEeecCCccceeEEEe--cCCCCeEEEEecCCeEEEEeCCCCCCCCceee------------------------
Q 023500 79 GNEFECVSVLQGHAQDVKMVQW--HPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCV------------------------ 132 (281)
Q Consensus 79 ~~~~~~~~~~~~~~~~v~~v~~--~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~------------------------ 132 (281)
... . .+.+|...|.+++| +|++.++++++.|+.|++|++...........
T Consensus 118 ~~~---~-~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 193 (368)
T 3mmy_A 118 NQA---I-QIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLI 193 (368)
T ss_dssp TEE---E-EEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEE
T ss_pred CCc---e-eeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEE
Confidence 542 2 24568999999999 89999999999999999999865421100000
Q ss_pred --------eeeeeccCCccccEEEEEEccCCCE----EEEeeCCCcEEEEeCCccccccCCCCcccceeEEeec------
Q 023500 133 --------QTISESNNGHSSTIWALSFNAKGDK----LVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISG------ 194 (281)
Q Consensus 133 --------~~~~~~~~~h~~~v~~~~~~~~~~~----l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~------ 194 (281)
.........+...+.++.+.++... +++++.|+.+++|+.+..... .....+..
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~--------~~~~~~~~~~~~~~ 265 (368)
T 3mmy_A 194 VYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPA--------KDNFTFKCHRSNGT 265 (368)
T ss_dssp EEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHH--------HHSEEEECSEEC--
T ss_pred EEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcc--------ccceeeeeeecccc
Confidence 0000000112233455666554443 999999999999998754220 01111111
Q ss_pred -----ccCcceEEEEeCCCc-eeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCC
Q 023500 195 -----YHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASD 268 (281)
Q Consensus 195 -----~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~ 268 (281)
.+..++.++.|+|++ ++++++.|+.+++|+.... ........|..+|++++|+|+++ +|++++.
T Consensus 266 ~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~---------~~~~~~~~~~~~v~~~~~s~~g~-~l~~~s~ 335 (368)
T 3mmy_A 266 NTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDAR---------TKLKTSEQLDQPISACCFNHNGN-IFAYASS 335 (368)
T ss_dssp --CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTT---------EEEEECCCCSSCEEEEEECTTSS-CEEEEEC
T ss_pred cccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCC---------cEEEEecCCCCCceEEEECCCCC-eEEEEec
Confidence 122379999999976 7889999999999977532 22344567899999999999886 5778888
Q ss_pred CCeEEEEEc
Q 023500 269 DGMIKIWEL 277 (281)
Q Consensus 269 Dg~v~iw~~ 277 (281)
|+..+.|++
T Consensus 336 d~~~~~~~~ 344 (368)
T 3mmy_A 336 YDWSKGHEF 344 (368)
T ss_dssp CCSTTCGGG
T ss_pred ccccccccc
Confidence 876555543
No 77
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2.1e-32 Score=229.90 Aligned_cols=249 Identities=22% Similarity=0.353 Sum_probs=189.8
Q ss_pred eeEEEEcCCCCE-EEEeeCCCcEEEEecCCCce--eeeeeecCCCCCeeEEEEcC-CCCEEEEecCCCcEEEEEecCCCe
Q 023500 6 VRSCAWSPSGKL-LATASFDATTCIWEDVGGDY--ECVATLEGHENEVKSVSWNA-SGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 6 i~~~~~~~~~~~-l~tg~~d~~i~lw~~~~~~~--~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
...++++|+... +++|+.||.|+||+...... ..+..+.+|.+.|.+++|+| ++.+|++|+.|++|++|++..+..
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~ 116 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGL 116 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCC
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCC
Confidence 445788887754 45689999999999754321 23456789999999999999 999999999999999999976531
Q ss_pred e----EEeEeecCCccceeEEEecCCC-CeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCC
Q 023500 82 F----ECVSVLQGHAQDVKMVQWHPTM-DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD 156 (281)
Q Consensus 82 ~----~~~~~~~~~~~~v~~v~~~p~~-~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 156 (281)
. .++..+.+|...|.+++|+|++ +++++++.|++|++|+++... .+..+. ..+|...|.+++|+|++.
T Consensus 117 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~--~~~~~~~v~~~~~~~~~~ 189 (402)
T 2aq5_A 117 VLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGA-----AVLTLG--PDVHPDTIYSVDWSRDGA 189 (402)
T ss_dssp SSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTE-----EEEEEC--TTTCCSCEEEEEECTTSS
T ss_pred ccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCC-----ccEEEe--cCCCCCceEEEEECCCCC
Confidence 1 2356778999999999999998 699999999999999987542 232221 146889999999999999
Q ss_pred EEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCc-ceEEEEeCCCcee-eec---CCCCcEEEEecccCCCc
Q 023500 157 KLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDR-TIFSVHWSREGII-ASG---AADDSVQFFVESKDDLI 231 (281)
Q Consensus 157 ~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~-~~~---~~d~~~~~~~~~~~~~~ 231 (281)
+|++++.|+.|++||++... ....+...|.. .+.++.|++++.+ +++ +.|+.+++|+......
T Consensus 190 ~l~~~~~d~~i~iwd~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~- 257 (402)
T 2aq5_A 190 LICTSCRDKRVRVIEPRKGT-----------VVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEE- 257 (402)
T ss_dssp CEEEEETTSEEEEEETTTTE-----------EEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSS-
T ss_pred EEEEEecCCcEEEEeCCCCc-----------eeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccC-
Confidence 99999999999999986432 22222122433 4788999998754 455 5899999998764321
Q ss_pred CCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 232 DGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 232 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
. .......|...+.+++|+|++..++++++.||.|++|++..
T Consensus 258 ---~---~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~ 299 (402)
T 2aq5_A 258 ---P---LSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITS 299 (402)
T ss_dssp ---C---SEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECS
T ss_pred ---C---ceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecC
Confidence 0 11112346778999999999887667888899999999875
No 78
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-32 Score=232.28 Aligned_cols=245 Identities=10% Similarity=0.071 Sum_probs=181.0
Q ss_pred ccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCce---------------------------eeeeeec-CCCCCeeEEE
Q 023500 3 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDY---------------------------ECVATLE-GHENEVKSVS 54 (281)
Q Consensus 3 ~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~---------------------------~~~~~~~-~h~~~v~~v~ 54 (281)
...|.+++|+|||+++||++.|++|+ |....+. .....+. +|...|.+++
T Consensus 15 ~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~va 92 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCK 92 (588)
T ss_dssp SSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEE
T ss_pred hccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEE
Confidence 35689999999999999999999995 3221110 0001222 5678899999
Q ss_pred EcCCCCEEEEecCCCcEEEEEecCCCeeEEeEeecCCcc-----ceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCC-
Q 023500 55 WNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQ-----DVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDN- 128 (281)
Q Consensus 55 ~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~~~~~~-----~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~- 128 (281)
|||+|.+||+++.||+|++|+... ++..+. |.. .+.+++|+|++++|++|+.||+|++|++.......
T Consensus 93 wSPdG~~LAs~s~dg~V~iwd~~~-----~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~ 166 (588)
T 2j04_A 93 PSPIDDWMAVLSNNGNVSVFKDNK-----MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTP 166 (588)
T ss_dssp ECSSSSCEEEEETTSCEEEEETTE-----EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCC
T ss_pred ECCCCCEEEEEeCCCcEEEEeCCc-----eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccc
Confidence 999999999999999999999532 445555 554 59999999999999999999999999987643111
Q ss_pred -ceeeeeeeeccCCccccEEEEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCC
Q 023500 129 -WHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR 207 (281)
Q Consensus 129 -~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 207 (281)
+..+.++.....+|...|.+++|+|++ +++++.|+++++|+.+..... .....+...|...|.+++|+
T Consensus 167 ~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~--------~~~~tL~~~h~~~V~svaFs- 235 (588)
T 2j04_A 167 EFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQ--------PVSRMIQNASRRKITDLKIV- 235 (588)
T ss_dssp CCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSC--------CCEEEEECCCSSCCCCEEEE-
T ss_pred cceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccc--------cceeeecccccCcEEEEEEE-
Confidence 112333332335788999999999998 888899999999998643210 01122323466789999998
Q ss_pred CceeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEE--cCCCCeeEEEeCCCCeEEEEEcc
Q 023500 208 EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQW--SPGERRLLASASDDGMIKIWELA 278 (281)
Q Consensus 208 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~~~s~~~Dg~v~iw~~~ 278 (281)
+..+++++ ++.+++|+.... .......+|...|..++| +|++. .++++.+||+ ++|...
T Consensus 236 g~~LASa~-~~tIkLWd~~~~---------~~~~~~~gh~~~V~~va~~~s~d~~-~La~a~edG~-klw~~d 296 (588)
T 2j04_A 236 DYKVVLTC-PGYVHKIDLKNY---------SISSLKTGSLENFHIIPLNHEKEST-ILLMSNKTSY-KVLLED 296 (588)
T ss_dssp TTEEEEEC-SSEEEEEETTTT---------EEEEEECSCCSCCCEEEETTCSSCE-EEEECSSCEE-EEEESS
T ss_pred CCEEEEEe-CCeEEEEECCCC---------eEEEEEcCCCceEEEEEeeeCCCCC-EEEEEcCCCC-EEEeec
Confidence 66777776 699999977542 111222269999999999 99874 6889999999 999863
No 79
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-32 Score=230.54 Aligned_cols=264 Identities=15% Similarity=0.150 Sum_probs=186.6
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecC---CCcee------eeeee--cC--CCCCeeEEE--EcCCCCEEEEec
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDV---GGDYE------CVATL--EG--HENEVKSVS--WNASGTLLATCG 66 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~---~~~~~------~~~~~--~~--h~~~v~~v~--~~~~~~~l~s~~ 66 (281)
|...|++++|+|++++|++|+.|+.|++||.. .++.. .+..+ .. +...+.++. ++|++.+|++|+
T Consensus 110 h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (437)
T 3gre_A 110 CSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALT 189 (437)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEE
T ss_pred CCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEe
Confidence 67899999999999999999999999999873 22211 11111 12 566777777 568899999999
Q ss_pred CCCcEEEEEecCCCeeEEeEeecC--CccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccc
Q 023500 67 RDKSVWIWEVMPGNEFECVSVLQG--HAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 144 (281)
Q Consensus 67 ~d~~v~~w~~~~~~~~~~~~~~~~--~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~ 144 (281)
.|+.|++||+.... ++..+.+ |...|++++|+|++.++++++.|++|++|++... +++..+. .+|..
T Consensus 190 ~d~~i~iwd~~~~~---~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~-----~~~~~~~---~~~~~ 258 (437)
T 3gre_A 190 NLSRVIIFDIRTLE---RLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFN-----VLIRSWS---FGDHA 258 (437)
T ss_dssp TTSEEEEEETTTCC---EEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTT-----EEEEEEB---CTTCE
T ss_pred CCCeEEEEeCCCCe---eeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCc-----cEEEEEe---cCCCC
Confidence 99999999997654 3455666 8889999999999999999999999999988753 2333322 25677
Q ss_pred cEEEEEEcc----CCCEEEEeeCCCcEEEEeCCccccccC-CCC----c--ccceeE------Eee-cccCcceEEEEeC
Q 023500 145 TIWALSFNA----KGDKLVSCSDDLTIKIWGADITRMQSG-DGY----A--SWRHLC------TIS-GYHDRTIFSVHWS 206 (281)
Q Consensus 145 ~v~~~~~~~----~~~~l~s~~~d~~i~~w~~~~~~~~~~-~~~----~--~~~~~~------~~~-~~~~~~v~~~~~~ 206 (281)
.|.+++|+| ++.+|++|+.|+.|++||+...+.... .+. . .+.+.. .+. ..|...|.+++++
T Consensus 259 ~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~ 338 (437)
T 3gre_A 259 PITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS 338 (437)
T ss_dssp EEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE
T ss_pred ceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC
Confidence 899996665 567999999999999999874432110 000 0 000000 000 1256778899999
Q ss_pred CCceeeecCCCCcEEEEecccCCCcCCccc----------------------------eeeeeeccCCCCCeeEEEEcCC
Q 023500 207 REGIIASGAADDSVQFFVESKDDLIDGPSY----------------------------KMLLKKEKAHDMDVNSVQWSPG 258 (281)
Q Consensus 207 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~h~~~v~~~~~~~~ 258 (281)
++.++++++.|+.+++|+............ .........|...|++++|+++
T Consensus 339 ~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~ 418 (437)
T 3gre_A 339 NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEV 418 (437)
T ss_dssp TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEES
T ss_pred CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeecc
Confidence 667899999999999998764322110000 0000112348999999999997
Q ss_pred -CCeeEEEeCCCCeEEEEE
Q 023500 259 -ERRLLASASDDGMIKIWE 276 (281)
Q Consensus 259 -~~~~~~s~~~Dg~v~iw~ 276 (281)
+..+|++|+.||.|+||+
T Consensus 419 ~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 419 DETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp SSSEEEEEEETTSCEEEEC
T ss_pred CCceEEEEEcCCceEEEeC
Confidence 346899999999999995
No 80
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.6e-31 Score=226.19 Aligned_cols=240 Identities=24% Similarity=0.427 Sum_probs=191.9
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEc--CCCCEEEEecCCCcEEEEEecCC
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN--ASGTLLATCGRDKSVWIWEVMPG 79 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~--~~~~~l~s~~~d~~v~~w~~~~~ 79 (281)
|...|++++|+|++ +|++|+.|+.|++||..+++ ++..+.+|.+.|.+++|+ +++.++++|+.|++|++||+...
T Consensus 161 h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~ 237 (464)
T 3v7d_B 161 HDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGC--CTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKE 237 (464)
T ss_dssp CSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCC
T ss_pred CCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCc--EEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCC
Confidence 78999999999988 99999999999999987764 577888999999999998 57789999999999999999765
Q ss_pred CeeE--------------------EeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeecc
Q 023500 80 NEFE--------------------CVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESN 139 (281)
Q Consensus 80 ~~~~--------------------~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~ 139 (281)
.... ....+.+|...+.++ +|+++++++++.|+.|++|++... +++..+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~-----~~~~~~---- 306 (464)
T 3v7d_B 238 SSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQM-----KCLYIL---- 306 (464)
T ss_dssp CCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTT-----EEEEEE----
T ss_pred cccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCC-----cEEEEe----
Confidence 4221 245677888888776 677889999999999999988653 233333
Q ss_pred CCccccEEEEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecCCCCc
Q 023500 140 NGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDS 219 (281)
Q Consensus 140 ~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~ 219 (281)
.+|...|.+++|+|++.+|++|+.|+.|++||.+.++ ....+. .|...+.++.++ +.++++++.|+.
T Consensus 307 ~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~-----------~~~~~~-~h~~~v~~~~~~-~~~l~s~s~dg~ 373 (464)
T 3v7d_B 307 SGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE-----------LMYTLQ-GHTALVGLLRLS-DKFLVSAAADGS 373 (464)
T ss_dssp CCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE-----------EEEEEC-CCSSCEEEEEEC-SSEEEEEETTSE
T ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc-----------EEEEEe-CCCCcEEEEEEc-CCEEEEEeCCCc
Confidence 4788999999999999999999999999999986432 222222 477889999998 468999999999
Q ss_pred EEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEcccC
Q 023500 220 VQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANT 280 (281)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~~ 280 (281)
+++|+..... .... ..|...+..++|+|++. ++++++ ||.|++||+...
T Consensus 374 v~vwd~~~~~--------~~~~--~~~~~~~~~~~~~~~~~-~l~~~~-dg~i~iwd~~~g 422 (464)
T 3v7d_B 374 IRGWDANDYS--------RKFS--YHHTNLSAITTFYVSDN-ILVSGS-ENQFNIYNLRSG 422 (464)
T ss_dssp EEEEETTTCC--------EEEE--EECTTCCCEEEEEECSS-EEEEEE-TTEEEEEETTTC
T ss_pred EEEEECCCCc--------eeee--ecCCCCccEEEEEeCCC-EEEEec-CCeEEEEECCCC
Confidence 9999775421 1111 13566788889999875 677777 999999998753
No 81
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.6e-31 Score=219.76 Aligned_cols=198 Identities=23% Similarity=0.410 Sum_probs=165.9
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|...|.++.|++++. +++++.|+.|++||..++. ++..+.+|.+.|.+++|+|++++|++|+.|++|++||+..+.
T Consensus 142 h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~- 217 (340)
T 1got_B 142 HTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQ--QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM- 217 (340)
T ss_dssp CSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS-
T ss_pred CCccEEEEEECCCCc-EEEEECCCcEEEEECCCCc--EEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe-
Confidence 778899999998876 7799999999999987764 567888999999999999999999999999999999997654
Q ss_pred eEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEe
Q 023500 82 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 161 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 161 (281)
+...+.+|...|++++|+|+++++++++.|++|++||+.... .+..+. ...+...|.+++|+|++++|++|
T Consensus 218 --~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~-----~~~~~~--~~~~~~~v~~~~~s~~g~~l~~g 288 (340)
T 1got_B 218 --CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ-----ELMTYS--HDNIICGITSVSFSKSGRLLLAG 288 (340)
T ss_dssp --EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-----EEEEEC--CTTCCSCEEEEEECTTSSEEEEE
T ss_pred --eEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCc-----EEEEEc--cCCcccceEEEEECCCCCEEEEE
Confidence 456788999999999999999999999999999999886532 222221 12344579999999999999999
Q ss_pred eCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEEe
Q 023500 162 SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFV 224 (281)
Q Consensus 162 ~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~ 224 (281)
+.|+.|++||..... ....+. .|..+|.++.|++++ ++++++.|+.+++|+
T Consensus 289 ~~d~~i~vwd~~~~~-----------~~~~~~-~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 289 YDDFNCNVWDALKAD-----------RAGVLA-GHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp ETTSEEEEEETTTCC-----------EEEEEE-CCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCCeEEEEEcccCc-----------EeeEee-cCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 999999999975332 122333 478899999999987 688999999999993
No 82
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=6.9e-31 Score=224.42 Aligned_cols=245 Identities=22% Similarity=0.407 Sum_probs=190.5
Q ss_pred Cccce-eEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCC
Q 023500 2 HTRTV-RSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN 80 (281)
Q Consensus 2 h~~~i-~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~ 80 (281)
|...| .++.+ ++++|++|+.||.|++||..+++ ++..+.+|.+.|.+++|+|++ .|++|+.|++|++||+..+.
T Consensus 120 h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~--~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~ 194 (464)
T 3v7d_B 120 HMTSVITCLQF--EDNYVITGADDKMIRVYDSINKK--FLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGC 194 (464)
T ss_dssp CSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTE
T ss_pred CCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCc--EEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCc
Confidence 55554 55555 67899999999999999987764 577888999999999999988 99999999999999997653
Q ss_pred eeEEeEeecCCccceeEEEec--CCCCeEEEEecCCeEEEEeCCCCCCCCceeee--------------eeeeccCCccc
Q 023500 81 EFECVSVLQGHAQDVKMVQWH--PTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQ--------------TISESNNGHSS 144 (281)
Q Consensus 81 ~~~~~~~~~~~~~~v~~v~~~--p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~--------------~~~~~~~~h~~ 144 (281)
++..+.+|...|.+++|+ |++.++++++.|++|++|++............ .+.....+|..
T Consensus 195 ---~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (464)
T 3v7d_B 195 ---CTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMA 271 (464)
T ss_dssp ---EEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSS
T ss_pred ---EEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccc
Confidence 567788999999999998 56789999999999999998764321100000 00112346788
Q ss_pred cEEEEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEE
Q 023500 145 TIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFF 223 (281)
Q Consensus 145 ~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~ 223 (281)
.|.++ ++++.++++++.|+.|++||+...+ ....+ ..|...+.++.+++++ .+++++.|+.+++|
T Consensus 272 ~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~-----------~~~~~-~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vw 337 (464)
T 3v7d_B 272 SVRTV--SGHGNIVVSGSYDNTLIVWDVAQMK-----------CLYIL-SGHTDRIYSTIYDHERKRCISASMDTTIRIW 337 (464)
T ss_dssp CEEEE--EEETTEEEEEETTSCEEEEETTTTE-----------EEEEE-CCCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred eEEEE--cCCCCEEEEEeCCCeEEEEECCCCc-----------EEEEe-cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEE
Confidence 88766 5778899999999999999986432 22222 2477889999999875 78899999999999
Q ss_pred ecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEcccC
Q 023500 224 VESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANT 280 (281)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~~ 280 (281)
+.... .......+|...|.++.|++ .++++++.||.|++||+...
T Consensus 338 d~~~~---------~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~v~vwd~~~~ 382 (464)
T 3v7d_B 338 DLENG---------ELMYTLQGHTALVGLLRLSD---KFLVSAAADGSIRGWDANDY 382 (464)
T ss_dssp ETTTT---------EEEEEECCCSSCEEEEEECS---SEEEEEETTSEEEEEETTTC
T ss_pred ECCCC---------cEEEEEeCCCCcEEEEEEcC---CEEEEEeCCCcEEEEECCCC
Confidence 77542 23344567999999999984 36889999999999998753
No 83
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.3e-32 Score=222.49 Aligned_cols=211 Identities=27% Similarity=0.523 Sum_probs=168.7
Q ss_pred CccceeEEEEcC--CCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCC--CCEEEEecCCCcEEEEEec
Q 023500 2 HTRTVRSCAWSP--SGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS--GTLLATCGRDKSVWIWEVM 77 (281)
Q Consensus 2 h~~~i~~~~~~~--~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~--~~~l~s~~~d~~v~~w~~~ 77 (281)
|...|++++|+| ++++||+|+.|++|+|||..++.......+.+|...|++++|+|+ +.+|++|+.|++|++|++.
T Consensus 56 H~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~ 135 (316)
T 3bg1_A 56 HEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYT 135 (316)
T ss_dssp CSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEEC
T ss_pred CCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecC
Confidence 788999999986 489999999999999999877655566778899999999999997 7899999999999999997
Q ss_pred CCCeeEEeEeecCCccceeEEEecCC-----------------CCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccC
Q 023500 78 PGNEFECVSVLQGHAQDVKMVQWHPT-----------------MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNN 140 (281)
Q Consensus 78 ~~~~~~~~~~~~~~~~~v~~v~~~p~-----------------~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~ 140 (281)
..........+.+|...|.++.|+|+ +.+|++++.|++|++|+++... .+++.. ...
T Consensus 136 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~--~~~~~~----~l~ 209 (316)
T 3bg1_A 136 GEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDG--QWKEEQ----KLE 209 (316)
T ss_dssp SSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTS--CEEEEE----CCB
T ss_pred CCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCC--ccceee----ecc
Confidence 65444445667789999999999997 3689999999999999885421 112222 234
Q ss_pred CccccEEEEEEccCC----CEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecC
Q 023500 141 GHSSTIWALSFNAKG----DKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGA 215 (281)
Q Consensus 141 ~h~~~v~~~~~~~~~----~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~ 215 (281)
+|...|.+++|+|++ .+|++|+.|++|++|+.+..... .+.. ..+ ..|...+.+++|+|++ ++++++
T Consensus 210 ~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~------~~~~-~~~-~~~~~~v~~v~~sp~g~~las~~ 281 (316)
T 3bg1_A 210 AHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSN------TWSP-KLL-HKFNDVVWHVSWSITANILAVSG 281 (316)
T ss_dssp CCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCC------CCBC-CEE-EECSSCEEEEEECTTTCCEEEEE
T ss_pred cCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCcccc------chhh-hhh-hcCCCcEEEEEEcCCCCEEEEEc
Confidence 799999999999986 78999999999999987632100 0000 011 2357889999999976 678899
Q ss_pred CCCcEEEEecc
Q 023500 216 ADDSVQFFVES 226 (281)
Q Consensus 216 ~d~~~~~~~~~ 226 (281)
.|+.+++|+..
T Consensus 282 ~D~~v~lw~~~ 292 (316)
T 3bg1_A 282 GDNKVTLWKES 292 (316)
T ss_dssp SSSCEEEEEEC
T ss_pred CCCeEEEEEEC
Confidence 99999999653
No 84
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=4e-31 Score=224.35 Aligned_cols=243 Identities=28% Similarity=0.452 Sum_probs=190.5
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|...|++++| ++++|++|+.||.|++||..+++ ++..+.+|...|.+++|++ ..+++|+.|+.|++||+.....
T Consensus 172 h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~ 245 (435)
T 1p22_A 172 HTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE--MLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTD 245 (435)
T ss_dssp CSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC--EEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSC
T ss_pred CCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc--EEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCC
Confidence 7788999988 78999999999999999987764 4678889999999999974 5999999999999999987665
Q ss_pred eEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEe
Q 023500 82 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 161 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 161 (281)
......+.+|...|.+++| +++++++++.|+.|++|+++... .+..+ .+|...|.++.|+ +.++++|
T Consensus 246 ~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~-----~~~~~----~~~~~~v~~~~~~--~~~l~~g 312 (435)
T 1p22_A 246 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCE-----FVRTL----NGHKRGIACLQYR--DRLVVSG 312 (435)
T ss_dssp CEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCC-----EEEEE----ECCSSCEEEEEEE--TTEEEEE
T ss_pred ceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCc-----EEEEE----cCCCCcEEEEEeC--CCEEEEE
Confidence 5445678899999999999 67899999999999999887542 33333 3688899999984 5799999
Q ss_pred eCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecCCCCcEEEEecccCCCcCCccceeeee
Q 023500 162 SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLK 241 (281)
Q Consensus 162 ~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 241 (281)
+.|+.|++||...... ...+. .|...+.++.+ ....+++++.|+.+++|+.........+.......
T Consensus 313 ~~dg~i~iwd~~~~~~-----------~~~~~-~h~~~v~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~ 379 (435)
T 1p22_A 313 SSDNTIRLWDIECGAC-----------LRVLE-GHEELVRCIRF-DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLR 379 (435)
T ss_dssp ETTSCEEEEETTTCCE-----------EEEEC-CCSSCEEEEEC-CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEE
T ss_pred eCCCeEEEEECCCCCE-----------EEEEe-CCcCcEEEEEe-cCCEEEEEeCCCcEEEEECCCCCCccccccchhee
Confidence 9999999999864321 22222 37788999999 45689999999999999875432111111111344
Q ss_pred eccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 242 KEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 242 ~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
....|...|++++|. +. .|++++.||.|++||+..
T Consensus 380 ~~~~h~~~v~~l~~~--~~-~l~s~s~Dg~i~iwd~~~ 414 (435)
T 1p22_A 380 TLVEHSGRVFRLQFD--EF-QIVSSSHDDTILIWDFLN 414 (435)
T ss_dssp EECCCSSCCCCEEEC--SS-CEEECCSSSEEEEEC---
T ss_pred eccCCCCCeEEEEeC--CC-EEEEEeCCCEEEEEECCC
Confidence 456899999999993 43 578999999999999865
No 85
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.8e-31 Score=218.04 Aligned_cols=198 Identities=24% Similarity=0.427 Sum_probs=166.1
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcC--CCCEEEEecCCCcEEEEEecCC
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEVMPG 79 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~--~~~~l~s~~~d~~v~~w~~~~~ 79 (281)
|...|.+++|+|+++.|++|+.|+.|++||..+++ ++..+.+|...|.+++|+| +|.+|++|+.|++|++||+..+
T Consensus 153 h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~ 230 (354)
T 2pbi_B 153 HTNYLSACSFTNSDMQILTASGDGTCALWDVESGQ--LLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSG 230 (354)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTC
T ss_pred cCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCe--EEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCC
Confidence 78889999999999999999999999999987764 4678889999999999988 4789999999999999999765
Q ss_pred CeeEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEE
Q 023500 80 NEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV 159 (281)
Q Consensus 80 ~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 159 (281)
. ++..+.+|...|++++|+|++.++++++.|++|++||+.... .+..+. ...+...+.+++|+|++.+|+
T Consensus 231 ~---~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~-----~~~~~~--~~~~~~~~~~~~~s~~g~~l~ 300 (354)
T 2pbi_B 231 Q---CVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADR-----EVAIYS--KESIIFGASSVDFSLSGRLLF 300 (354)
T ss_dssp C---EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-----EEEEEC--CTTCCSCEEEEEECTTSSEEE
T ss_pred c---EEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCc-----EEEEEc--CCCcccceeEEEEeCCCCEEE
Confidence 4 466788999999999999999999999999999999886532 222221 112345688999999999999
Q ss_pred EeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEE
Q 023500 160 SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFF 223 (281)
Q Consensus 160 s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~ 223 (281)
+|+.|+.|++||+.... ....+ ..|...|.+++|+|++ ++++++.|+.+++|
T Consensus 301 ~g~~d~~i~vwd~~~~~-----------~~~~l-~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 301 AGYNDYTINVWDVLKGS-----------RVSIL-FGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp EEETTSCEEEEETTTCS-----------EEEEE-CCCSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred EEECCCcEEEEECCCCc-----------eEEEE-ECCCCcEEEEEECCCCCEEEEEcCCCCEEec
Confidence 99999999999985332 12222 2478899999999987 68899999999999
No 86
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.9e-31 Score=221.35 Aligned_cols=204 Identities=15% Similarity=0.114 Sum_probs=159.1
Q ss_pred ccceeEEEEcCCCCEEE--EeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCC
Q 023500 3 TRTVRSCAWSPSGKLLA--TASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN 80 (281)
Q Consensus 3 ~~~i~~~~~~~~~~~l~--tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~ 80 (281)
...+.+++|+|||+++| +++.|+.|+|||..+.+ ++..+. |.+.|.+++|+|+|++|++++.|+ +.+|+...+.
T Consensus 133 ~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~--~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~ 208 (365)
T 4h5i_A 133 DDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLT--EKFEIE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGS 208 (365)
T ss_dssp TCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTE--EEEEEE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCC
T ss_pred ccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCc--EEEEeC-CCCceEEEEEccCCceEEecccee-EEEEEeccCc
Confidence 34588999999999876 45578999999988764 355554 788999999999999999998654 6667765554
Q ss_pred eeEEeEeecCCccceeEEEecCCCCeEEEEecCC----eEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCC
Q 023500 81 EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN----TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD 156 (281)
Q Consensus 81 ~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~----~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 156 (281)
. ........|...|++++|+|++..+++++.|+ .+++|++..... .........+|...|++++|+|+++
T Consensus 209 ~-~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~-----~~~~~~~~~~~~~~V~~~~~Spdg~ 282 (365)
T 4h5i_A 209 C-IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNT-----SVLRSKQVTNRFKGITSMDVDMKGE 282 (365)
T ss_dssp E-EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEE-----EEEEEEEEESSCSCEEEEEECTTSC
T ss_pred c-eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccccccee-----cceeeeeecCCCCCeEeEEECCCCC
Confidence 3 22345567888999999999999999999888 678887654321 1111112246888999999999999
Q ss_pred EEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEEeccc
Q 023500 157 KLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESK 227 (281)
Q Consensus 157 ~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~ 227 (281)
+|++|+.|++|++||++..+ .+..+...|..+|.+++|+|++ ++++++.|+++++|++..
T Consensus 283 ~lasgs~D~~V~iwd~~~~~-----------~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 283 LAVLASNDNSIALVKLKDLS-----------MSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEEEEETTSCEEEEETTTTE-----------EEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred ceEEEcCCCEEEEEECCCCc-----------EEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 99999999999999986432 2333344689999999999987 688999999999998854
No 87
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=2.6e-32 Score=228.72 Aligned_cols=254 Identities=13% Similarity=0.098 Sum_probs=168.0
Q ss_pred EEcCCCCEEEEeeCCCcEEEEecCCCcee---eeeeecCCCCCeeEEEEcC--------CCCEEEEecCCCcEEEEEecC
Q 023500 10 AWSPSGKLLATASFDATTCIWEDVGGDYE---CVATLEGHENEVKSVSWNA--------SGTLLATCGRDKSVWIWEVMP 78 (281)
Q Consensus 10 ~~~~~~~~l~tg~~d~~i~lw~~~~~~~~---~~~~~~~h~~~v~~v~~~~--------~~~~l~s~~~d~~v~~w~~~~ 78 (281)
.+.+++.+||+|+.|++|+|||...++.. .+..+.+|.+.|++++|+| ++++|+|||.|++|++||+..
T Consensus 96 ~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~ 175 (393)
T 4gq1_A 96 SSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTD 175 (393)
T ss_dssp -CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEET
T ss_pred ecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCC
Confidence 34456678999999999999998776432 3456789999999999998 789999999999999999976
Q ss_pred CCeeEEeEeecCCccceeEEEecCCCC-eEEEEecCCeEEEEeCCCCCCCCce---------eeeee-------eeccCC
Q 023500 79 GNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKVWWAEDTDSDNWH---------CVQTI-------SESNNG 141 (281)
Q Consensus 79 ~~~~~~~~~~~~~~~~v~~v~~~p~~~-~l~s~s~d~~v~~w~~~~~~~~~~~---------~~~~~-------~~~~~~ 141 (281)
.. +...+.+|...+.+++|+|++. ++++++.|++|++||+......... ..... .....+
T Consensus 176 ~~---~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 252 (393)
T 4gq1_A 176 EG---PILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSG 252 (393)
T ss_dssp TE---EEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------C
T ss_pred Cc---eeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccc
Confidence 54 3445567888899999999875 7999999999999998754211000 00000 001236
Q ss_pred ccccEEEEEEc-cCCCEEEEeeCCCcEEEEeCCccccccCCCCc-------ccceeEEeecccCcceEEEEeC-CCc-ee
Q 023500 142 HSSTIWALSFN-AKGDKLVSCSDDLTIKIWGADITRMQSGDGYA-------SWRHLCTISGYHDRTIFSVHWS-REG-II 211 (281)
Q Consensus 142 h~~~v~~~~~~-~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~v~~~~~~-~~~-~~ 211 (281)
|...+.++.|+ +++..+++++.|+++++||+...+........ ...+.......+...+..+.+. .++ ++
T Consensus 253 ~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
T 4gq1_A 253 IASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFA 332 (393)
T ss_dssp CSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEE
T ss_pred ccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEE
Confidence 78889999987 79999999999999999998644321110000 0000000000111222222222 233 46
Q ss_pred eecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEc
Q 023500 212 ASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 277 (281)
Q Consensus 212 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~ 277 (281)
++|+.|+.+++|+...... ......|..+|++++|+|+|+ +||++++||. .+|.+
T Consensus 333 ~sgs~Dg~V~lwd~~~~~~---------~~~~~~~~~~V~svafspdG~-~LA~as~~Gv-~lvrL 387 (393)
T 4gq1_A 333 TAHSQHGLIQLINTYEKDS---------NSIPIQLGMPIVDFCWHQDGS-HLAIATEGSV-LLTRL 387 (393)
T ss_dssp EEETTTTEEEEEETTCTTC---------CEEEEECSSCEEEEEECTTSS-EEEEEESSEE-EEEEE
T ss_pred EEECCCCEEEEEECCCCcE---------EEEecCCCCcEEEEEEcCCCC-EEEEEeCCCe-EEEEE
Confidence 7788899999998754321 112335778999999999986 5788887665 44443
No 88
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1e-30 Score=230.33 Aligned_cols=243 Identities=16% Similarity=0.277 Sum_probs=195.6
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCC--ceeeeeeecCCCCC-eeEEEEcC--CCCEEEEecCCCcEEEEEe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGG--DYECVATLEGHENE-VKSVSWNA--SGTLLATCGRDKSVWIWEV 76 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~--~~~~~~~~~~h~~~-v~~v~~~~--~~~~l~s~~~d~~v~~w~~ 76 (281)
|...|++++|+|+|++||+++ ++.+.+|+..++ .......+.+|.+. |.+++|+| ++++|++++.|++|++||+
T Consensus 17 ~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~ 95 (615)
T 1pgu_A 17 QRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGW 95 (615)
T ss_dssp CTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEE
T ss_pred ccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeC
Confidence 678899999999999999998 889999998755 11246788899999 99999999 9999999999999999999
Q ss_pred cCCC-----eeEEeEeecCCccceeEEEecCCCCeEEEEecC----CeEEEEeCCCCCCCCceeeeeeeeccCCccccEE
Q 023500 77 MPGN-----EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYD----NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIW 147 (281)
Q Consensus 77 ~~~~-----~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d----~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 147 (281)
..+. .......+..|...|.+++|+|+++++++++.+ +.|++|+... .+.. ..+|...|.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~-------~~~~----~~~~~~~v~ 164 (615)
T 1pgu_A 96 TFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGN-------SLGE----VSGHSQRIN 164 (615)
T ss_dssp EEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCC-------EEEE----CCSCSSCEE
T ss_pred CCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCC-------ccee----eecCCccEE
Confidence 6431 234566778899999999999999999999988 6899996221 2222 247889999
Q ss_pred EEEEccCCC-EEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCc---ceEEEEeCCC-c-eeeecCCCCcEE
Q 023500 148 ALSFNAKGD-KLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDR---TIFSVHWSRE-G-IIASGAADDSVQ 221 (281)
Q Consensus 148 ~~~~~~~~~-~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~-~~~~~~~d~~~~ 221 (281)
+++|+|++. .+++++.|+.|++||....+ ....+. .|.. .+.++.|+|+ + ++++++.|+.++
T Consensus 165 ~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~-----------~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 232 (615)
T 1pgu_A 165 ACHLKQSRPMRSMTVGDDGSVVFYQGPPFK-----------FSASDR-THHKQGSFVRDVEFSPDSGEFVITVGSDRKIS 232 (615)
T ss_dssp EEEECSSSSCEEEEEETTTEEEEEETTTBE-----------EEEEEC-SSSCTTCCEEEEEECSTTCCEEEEEETTCCEE
T ss_pred EEEECCCCCcEEEEEeCCCcEEEEeCCCcc-----------eeeeec-ccCCCCceEEEEEECCCCCCEEEEEeCCCeEE
Confidence 999999997 89999999999999975432 222222 3566 8999999988 5 688889999999
Q ss_pred EEecccCCCcCCccceeeeeec-c---CCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 222 FFVESKDDLIDGPSYKMLLKKE-K---AHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~-~---~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
+|+..... ..... . .|...|++++|+ ++. ++++++.|+.|++||+..
T Consensus 233 vwd~~~~~---------~~~~~~~~~~~~~~~v~~~~~~-~~~-~l~~~~~d~~i~~wd~~~ 283 (615)
T 1pgu_A 233 CFDGKSGE---------FLKYIEDDQEPVQGGIFALSWL-DSQ-KFATVGADATIRVWDVTT 283 (615)
T ss_dssp EEETTTCC---------EEEECCBTTBCCCSCEEEEEES-SSS-EEEEEETTSEEEEEETTT
T ss_pred EEECCCCC---------EeEEecccccccCCceEEEEEc-CCC-EEEEEcCCCcEEEEECCC
Confidence 99765321 12222 3 789999999999 664 678999999999999864
No 89
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=9.6e-31 Score=237.88 Aligned_cols=245 Identities=20% Similarity=0.276 Sum_probs=198.6
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|...|++++|+|++++||+|+.|+.|++|+..+++ .+..+.+|.+.|.+++|+|++.+|++++.|++|++|++..+.
T Consensus 54 ~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~- 130 (814)
T 3mkq_A 54 TETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE--KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW- 130 (814)
T ss_dssp CSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTS-
T ss_pred CCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc--EEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCc-
Confidence 78899999999999999999999999999987764 466788999999999999999999999999999999997653
Q ss_pred eEEeEeecCCccceeEEEecC-CCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEcc--CCCEE
Q 023500 82 FECVSVLQGHAQDVKMVQWHP-TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNA--KGDKL 158 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~v~~~p-~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l 158 (281)
.....+.+|...|.+++|+| ++..+++++.|++|++|++..... ...+. ..|...+.+++|+| ++.+|
T Consensus 131 -~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~-----~~~~~---~~~~~~v~~~~~~~~~~~~~l 201 (814)
T 3mkq_A 131 -ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP-----NFTLT---TGQERGVNYVDYYPLPDKPYM 201 (814)
T ss_dssp -EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSC-----SEEEE---CCCTTCCCEEEECCSTTCCEE
T ss_pred -eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcc-----eeEEe---cCCCCCEEEEEEEECCCCCEE
Confidence 34566788999999999999 788999999999999999865421 11121 23457789999999 89999
Q ss_pred EEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEEecccCCCcCCccce
Q 023500 159 VSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYK 237 (281)
Q Consensus 159 ~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 237 (281)
++++.||.|++||..... ....+. .|...+.++.|+|++ .+++++.|+.+++|+....
T Consensus 202 ~~~~~dg~i~~~d~~~~~-----------~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~--------- 260 (814)
T 3mkq_A 202 ITASDDLTIKIWDYQTKS-----------CVATLE-GHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY--------- 260 (814)
T ss_dssp EEECTTSEEEEEETTTTE-----------EEEEEE-CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC---------
T ss_pred EEEeCCCEEEEEECCCCc-----------EEEEEc-CCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---------
Confidence 999999999999976432 122222 367889999999987 6888899999999976542
Q ss_pred eeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 238 MLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 238 ~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
........|...+++++|+|++..++++++.|+.+.+|++..
T Consensus 261 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (814)
T 3mkq_A 261 KVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN 302 (814)
T ss_dssp SEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSC
T ss_pred cEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCC
Confidence 123344567789999999999876544555577888998754
No 90
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.4e-31 Score=223.38 Aligned_cols=230 Identities=17% Similarity=0.338 Sum_probs=176.2
Q ss_pred EEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEEeEeecCCccceeEEEecCCCCe
Q 023500 27 TCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDV 106 (281)
Q Consensus 27 i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~ 106 (281)
+..|+... ..+..++.+|.+.|++++|+|++++|+|||.|++|++||+..+. ....+..|...|.+++|+|++++
T Consensus 48 ~~~~~~~~--~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~---~~~~~~~h~~~v~~~~~s~~g~~ 122 (380)
T 3iz6_a 48 AVSFNPTD--LVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQ---KTHAIKLHCPWVMECAFAPNGQS 122 (380)
T ss_dssp CCCCCCCC--CEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTE---EEEEEECCCTTCCCCEECTTSSE
T ss_pred ccccccce--eEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc---cceEEecCCCCEEEEEECCCCCE
Confidence 33454433 35678899999999999999999999999999999999986553 45677889999999999999999
Q ss_pred EEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCC-CEEEEeeCCCcEEEEeCCccccccCCCCcc
Q 023500 107 LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG-DKLVSCSDDLTIKIWGADITRMQSGDGYAS 185 (281)
Q Consensus 107 l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~ 185 (281)
+++++.|+.+++|++........ .........+|...|.++.|+|++ ..|++|+.|++|++||+..++......
T Consensus 123 las~~~d~~v~iw~~~~~~~~~~--~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~--- 197 (380)
T 3iz6_a 123 VACGGLDSACSIFNLSSQADRDG--NMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFG--- 197 (380)
T ss_dssp EEECCSSSCCEEEECCCCSSCCC--SSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEEC---
T ss_pred EEEeeCCCcEEEEECCCCccccC--CccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEee---
Confidence 99999999999999865321110 011122335899999999999974 579999999999999987543211000
Q ss_pred cceeEEeecccCcceEEEEeCC--CceeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeE
Q 023500 186 WRHLCTISGYHDRTIFSVHWSR--EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLL 263 (281)
Q Consensus 186 ~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 263 (281)
......|...+.++.+.+ ..++++++.|+.+++|+.+... .......+|...|++++|+|++. +|
T Consensus 198 ----~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~--------~~~~~~~~h~~~v~~v~~~p~~~-~l 264 (380)
T 3iz6_a 198 ----SEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITS--------RAVRTYHGHEGDINSVKFFPDGQ-RF 264 (380)
T ss_dssp ----CCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTC--------CCCEEECCCSSCCCEEEECTTSS-EE
T ss_pred ----cccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCC--------cceEEECCcCCCeEEEEEecCCC-eE
Confidence 001124677899999875 3589999999999999875321 12234467999999999999875 68
Q ss_pred EEeCCCCeEEEEEccc
Q 023500 264 ASASDDGMIKIWELAN 279 (281)
Q Consensus 264 ~s~~~Dg~v~iw~~~~ 279 (281)
++|+.||.|+|||+..
T Consensus 265 ~s~s~D~~i~lwd~~~ 280 (380)
T 3iz6_a 265 GTGSDDGTCRLFDMRT 280 (380)
T ss_dssp EEECSSSCEEEEETTT
T ss_pred EEEcCCCeEEEEECCC
Confidence 8999999999999864
No 91
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.1e-30 Score=212.27 Aligned_cols=231 Identities=23% Similarity=0.313 Sum_probs=170.1
Q ss_pred EEeeCCCcEEE--EecCCCceeeeeeecCCCCCeeEEEEcCC-CCEEEEecCCCcEEEEEecCCCe--eEEeEeecCCcc
Q 023500 19 ATASFDATTCI--WEDVGGDYECVATLEGHENEVKSVSWNAS-GTLLATCGRDKSVWIWEVMPGNE--FECVSVLQGHAQ 93 (281)
Q Consensus 19 ~tg~~d~~i~l--w~~~~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~~~d~~v~~w~~~~~~~--~~~~~~~~~~~~ 93 (281)
.+|...|+..+ +.....+.....+++||.+.|++|+|+|+ +++|+|||.|++|++||+..... ..+...+.+|..
T Consensus 8 ~~g~d~g~~~~~~~~~~~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~ 87 (340)
T 4aow_A 8 SSGVDLGTENLYFQSMMTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSH 87 (340)
T ss_dssp ------------------CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSS
T ss_pred ccccCCCCccEEEEEccCCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCC
Confidence 34444454434 33344555566789999999999999997 68999999999999999976532 345677899999
Q ss_pred ceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeCCCcEEEEeCC
Q 023500 94 DVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 173 (281)
Q Consensus 94 ~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~ 173 (281)
.|.+++|+|++.++++++.|+.|++|+..... ..... ..+...+....+++++..|++++.|+.+++||..
T Consensus 88 ~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~-----~~~~~----~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~ 158 (340)
T 4aow_A 88 FVSDVVISSDGQFALSGSWDGTLRLWDLTTGT-----TTRRF----VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL 158 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTE-----EEEEE----ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred CEEEEEECCCCCEEEEEcccccceEEeecccc-----eeeee----cCCCCceeEEEEeecCccceeecCCCeEEEEEeC
Confidence 99999999999999999999999999876542 11111 2355677888999999999999999999999875
Q ss_pred ccccccCCCCcccceeEEeecccCcceEEEEeCCC---ceeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCe
Q 023500 174 ITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE---GIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDV 250 (281)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 250 (281)
.... .......|...+..+.++++ .++++++.|+.+++|+.... .......+|..+|
T Consensus 159 ~~~~-----------~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~---------~~~~~~~~h~~~v 218 (340)
T 4aow_A 159 GVCK-----------YTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC---------KLKTNHIGHTGYL 218 (340)
T ss_dssp SCEE-----------EEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTT---------EEEEEECCCSSCE
T ss_pred CCce-----------EEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCC---------ceeeEecCCCCcE
Confidence 3221 11112235677888887764 36788999999999977542 2334456799999
Q ss_pred eEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 251 NSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 251 ~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
++++|+|+++ +|++|+.||.|++||+..
T Consensus 219 ~~~~~s~~~~-~l~s~s~Dg~i~iwd~~~ 246 (340)
T 4aow_A 219 NTVTVSPDGS-LCASGGKDGQAMLWDLNE 246 (340)
T ss_dssp EEEEECTTSS-EEEEEETTCEEEEEETTT
T ss_pred EEEEECCCCC-EEEEEeCCCeEEEEEecc
Confidence 9999999875 688999999999999865
No 92
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=3e-30 Score=218.93 Aligned_cols=234 Identities=23% Similarity=0.472 Sum_probs=186.8
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|...|+++++ ++++|++|+.||.|++||..+++ +...+.+|.+.|.+++| ++++|++|+.|++|++||+..+.
T Consensus 132 ~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~- 204 (435)
T 1p22_A 132 TSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLE--CKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE- 204 (435)
T ss_dssp SCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCC--EEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC-
T ss_pred CCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCe--EEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc-
Confidence 3456777766 89999999999999999987764 46778899999999998 78899999999999999997664
Q ss_pred eEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEe
Q 023500 82 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 161 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 161 (281)
....+.+|...|.+++|++ ..+++++.|+.|++|++...... .......+|...|.+++| ++.+|++|
T Consensus 205 --~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~------~~~~~~~~~~~~v~~~~~--~~~~l~s~ 272 (435)
T 1p22_A 205 --MLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDI------TLRRVLVGHRAAVNVVDF--DDKYIVSA 272 (435)
T ss_dssp --EEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCC------EEEEEECCCSSCEEEEEE--ETTEEEEE
T ss_pred --EEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCc------eeeeEecCCCCcEEEEEe--CCCEEEEE
Confidence 4567789999999999975 49999999999999998764321 111223478899999999 67799999
Q ss_pred eCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecCCCCcEEEEecccCCCcCCccceeeee
Q 023500 162 SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLK 241 (281)
Q Consensus 162 ~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 241 (281)
+.|+.|++||+.... ....+. .|...+.++.++ +..+++++.|+.+++|+.... ....
T Consensus 273 ~~dg~i~vwd~~~~~-----------~~~~~~-~~~~~v~~~~~~-~~~l~~g~~dg~i~iwd~~~~---------~~~~ 330 (435)
T 1p22_A 273 SGDRTIKVWNTSTCE-----------FVRTLN-GHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECG---------ACLR 330 (435)
T ss_dssp ETTSEEEEEETTTCC-----------EEEEEE-CCSSCEEEEEEE-TTEEEEEETTSCEEEEETTTC---------CEEE
T ss_pred eCCCeEEEEECCcCc-----------EEEEEc-CCCCcEEEEEeC-CCEEEEEeCCCeEEEEECCCC---------CEEE
Confidence 999999999986432 122222 367788888884 568999999999999977542 1233
Q ss_pred eccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 242 KEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 242 ~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
...+|...|++++|. + .++++|+.||.|++||+..
T Consensus 331 ~~~~h~~~v~~~~~~--~-~~l~sg~~dg~i~vwd~~~ 365 (435)
T 1p22_A 331 VLEGHEELVRCIRFD--N-KRIVSGAYDGKIKVWDLVA 365 (435)
T ss_dssp EECCCSSCEEEEECC--S-SEEEEEETTSCEEEEEHHH
T ss_pred EEeCCcCcEEEEEec--C-CEEEEEeCCCcEEEEECCC
Confidence 456799999999994 3 3688999999999999753
No 93
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.9e-30 Score=216.81 Aligned_cols=236 Identities=22% Similarity=0.429 Sum_probs=181.0
Q ss_pred eeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEEe
Q 023500 6 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECV 85 (281)
Q Consensus 6 i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~ 85 (281)
+.+++|++ ..+++++.|+.|++|+..+++...... ..|...|.+++|+|++.+|++|+.|+.|++||+..+. .+
T Consensus 96 ~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~-~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~---~~ 169 (401)
T 4aez_A 96 LNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAE-TDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQT---KL 169 (401)
T ss_dssp CBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEE-CCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCC---EE
T ss_pred EEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeee-cCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCe---EE
Confidence 34456654 567788999999999998876533322 2388999999999999999999999999999997654 35
Q ss_pred EeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeCCC
Q 023500 86 SVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDL 165 (281)
Q Consensus 86 ~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~ 165 (281)
..+.+|...|.+++|+ +..+++++.|+.|++|++.... .....+ .+|...|.+++|+|++.+|++|+.|+
T Consensus 170 ~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~----~~~~~~----~~~~~~v~~~~~~~~~~~l~s~~~d~ 239 (401)
T 4aez_A 170 RTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIAN----HQIGTL----QGHSSEVCGLAWRSDGLQLASGGNDN 239 (401)
T ss_dssp EEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSS----CEEEEE----ECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCc----ceeeEE----cCCCCCeeEEEEcCCCCEEEEEeCCC
Confidence 6678999999999995 4699999999999999987432 122222 36889999999999999999999999
Q ss_pred cEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc--eeeecC--CCCcEEEEecccCCCcCCccceeeee
Q 023500 166 TIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGA--ADDSVQFFVESKDDLIDGPSYKMLLK 241 (281)
Q Consensus 166 ~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~--~d~~~~~~~~~~~~~~~~~~~~~~~~ 241 (281)
.|++||+.... ....+ ..|...+.+++|+|++ ++++++ .|+.+++|+..... . ..
T Consensus 240 ~v~iwd~~~~~-----------~~~~~-~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~-----~----~~ 298 (401)
T 4aez_A 240 VVQIWDARSSI-----------PKFTK-TNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA-----R----VN 298 (401)
T ss_dssp CEEEEETTCSS-----------EEEEE-CCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC-----E----EE
T ss_pred eEEEccCCCCC-----------ccEEe-cCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC-----E----EE
Confidence 99999986432 12222 2367889999999854 556544 79999999775421 1 11
Q ss_pred eccCCCCCeeEEEEcCCCCeeEEE-eCCCCeEEEEEccc
Q 023500 242 KEKAHDMDVNSVQWSPGERRLLAS-ASDDGMIKIWELAN 279 (281)
Q Consensus 242 ~~~~h~~~v~~~~~~~~~~~~~~s-~~~Dg~v~iw~~~~ 279 (281)
.. .|...|++++|+|+++.++++ |+.||.|+||++..
T Consensus 299 ~~-~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 299 TV-DAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp EE-ECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEET
T ss_pred EE-eCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCC
Confidence 11 256789999999998754433 55899999999875
No 94
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-31 Score=242.20 Aligned_cols=253 Identities=13% Similarity=0.128 Sum_probs=179.7
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceee--ee--eec-----CCCCCeeEEEEcCCCCEEEEecCCCcEE
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYEC--VA--TLE-----GHENEVKSVSWNASGTLLATCGRDKSVW 72 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~--~~--~~~-----~h~~~v~~v~~~~~~~~l~s~~~d~~v~ 72 (281)
|...+..++|+|++++||||+.|++|++||..++.... .. .+. +|...|++++|+|+|++||+|+.|++|+
T Consensus 434 ~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~ 513 (902)
T 2oaj_A 434 GVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVV 513 (902)
T ss_dssp SBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEE
T ss_pred CcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEE
Confidence 34456667789999999999999999999987654211 11 122 8999999999999999999999999999
Q ss_pred EEEecCCCe------------------------------------------eEEeEeecCCccceeEEEecCCCCeEEEE
Q 023500 73 IWEVMPGNE------------------------------------------FECVSVLQGHAQDVKMVQWHPTMDVLFSC 110 (281)
Q Consensus 73 ~w~~~~~~~------------------------------------------~~~~~~~~~~~~~v~~v~~~p~~~~l~s~ 110 (281)
+|++...+. ++++..+.+|...|++++|+|++ +|++|
T Consensus 514 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsg 592 (902)
T 2oaj_A 514 LFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIA 592 (902)
T ss_dssp EEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEE
T ss_pred EEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEE
Confidence 999975421 24567788999999999999999 99999
Q ss_pred ecCCeEEEEeCCCCCCCCceeee--eeeecc-CCccccEEEEEEc-----cCC---CEEEEeeCCCcEEEEeC---Cccc
Q 023500 111 SYDNTIKVWWAEDTDSDNWHCVQ--TISESN-NGHSSTIWALSFN-----AKG---DKLVSCSDDLTIKIWGA---DITR 176 (281)
Q Consensus 111 s~d~~v~~w~~~~~~~~~~~~~~--~~~~~~-~~h~~~v~~~~~~-----~~~---~~l~s~~~d~~i~~w~~---~~~~ 176 (281)
+.|++|++||++... .+. .+ ... .+|...|++++|+ ||+ .+|++|+.|++|++||+ ..++
T Consensus 593 s~D~tv~lwd~~~~~-----~~~~~~~-~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~ 666 (902)
T 2oaj_A 593 YAAGSLMLIDRRGPA-----IIYMENI-REISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGK 666 (902)
T ss_dssp ETTSEEEEEETTTTE-----EEEEEEG-GGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGC
T ss_pred eCCCcEEEEECCCCe-----EEEEeeh-hHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCc
Confidence 999999999976532 111 11 123 3899999999999 885 79999999999999997 2222
Q ss_pred cccCCCCcccceeEEeecccCcceEEEE-eC----------------------CCceeeecCCCCcEEEEecccCCCcCC
Q 023500 177 MQSGDGYASWRHLCTISGYHDRTIFSVH-WS----------------------REGIIASGAADDSVQFFVESKDDLIDG 233 (281)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~----------------------~~~~~~~~~~d~~~~~~~~~~~~~~~~ 233 (281)
... ....... ..+..+|.++. ++ +++++++++ +..+++|.....
T Consensus 667 ~~~-----~~~~~~~--~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~-~~~ir~~~~~~~----- 733 (902)
T 2oaj_A 667 FDV-----QLMDITN--VTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITG-FDDIRLITLGKS----- 733 (902)
T ss_dssp EEE-----EEEEEEE--CCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC-SSEEEEECTTCC-----
T ss_pred EEE-----EecCcee--cCCCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEEEe-ccceEEEeCccc-----
Confidence 110 0000000 01234444443 22 455666655 778999976542
Q ss_pred ccceeeeeeccCCCCCeeEE---E------EcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 234 PSYKMLLKKEKAHDMDVNSV---Q------WSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 234 ~~~~~~~~~~~~h~~~v~~~---~------~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
+.. .....|.-.+..+ . |++++. .|+++..||.|++|++..
T Consensus 734 ---k~~-~k~~~~~~~~~~v~~~~~~~~~~~~~~~~-~l~~~~~~g~i~~~s~p~ 783 (902)
T 2oaj_A 734 ---KST-HKGFKYPLAATGLSYISTVEKNNDRKNLT-VIITLEINGHLRVFTIPD 783 (902)
T ss_dssp ---CEE-EEECSSCEEEEEEEEEEEECSSSCEEEEE-EEEEEETTSEEEEEETTT
T ss_pred ---cce-eeEcccceeeeEEEEEEeccccccccCce-EEEEEeCCCcEEEEECcc
Confidence 111 1123444455555 5 667654 688999999999999865
No 95
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.5e-30 Score=244.92 Aligned_cols=260 Identities=24% Similarity=0.431 Sum_probs=199.4
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcC--CCCEEEEecCCCcEEEEEecCC
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEVMPG 79 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~--~~~~l~s~~~d~~v~~w~~~~~ 79 (281)
|...|++++|+|+|++||+|+.|+.|++||..+++ ++..+.+|...|.+++|+| ++.++++|+.|+.|++||+..+
T Consensus 656 h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~ 733 (1249)
T 3sfz_A 656 HEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGK--LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQK 733 (1249)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSS
T ss_pred CCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCc--eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCc
Confidence 78899999999999999999999999999998774 5778889999999999999 4568999999999999999766
Q ss_pred CeeEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCce------------------ee---------
Q 023500 80 NEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWH------------------CV--------- 132 (281)
Q Consensus 80 ~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~------------------~~--------- 132 (281)
. +...+.+|...|++++|+|++.++++++.|++|++|++......... .+
T Consensus 734 ~---~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg 810 (1249)
T 3sfz_A 734 E---CRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADG 810 (1249)
T ss_dssp S---EEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTS
T ss_pred c---hhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCC
Confidence 4 45677899999999999999999999999999999997643110000 00
Q ss_pred -------------------eeeeeccCCccccEEEEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEee
Q 023500 133 -------------------QTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTIS 193 (281)
Q Consensus 133 -------------------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~ 193 (281)
..+.....+|...|.+++|+|++..+++++.|+.|++|+..... ....+
T Consensus 811 ~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~-----------~~~~~- 878 (1249)
T 3sfz_A 811 DKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRL-----------KVADC- 878 (1249)
T ss_dssp SEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTE-----------EEEEE-
T ss_pred CEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc-----------eeeec-
Confidence 00001112678889999999999999999999999999986432 12222
Q ss_pred cccCcceEEEEeCCCc-eeeecCCCCcEEEEecccCCCc-----------------------------------------
Q 023500 194 GYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLI----------------------------------------- 231 (281)
Q Consensus 194 ~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~----------------------------------------- 231 (281)
..|...|.++.|++++ .+++++.|+.+++|+.......
T Consensus 879 ~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 958 (1249)
T 3sfz_A 879 RGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDY 958 (1249)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEE
T ss_pred CCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEE
Confidence 2467788888888876 6788888888888874320000
Q ss_pred -----------------------CCc------cceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 232 -----------------------DGP------SYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 232 -----------------------~~~------~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
++. ..........+|...|++++|+|+++ ++++++.||.|++|++..
T Consensus 959 ~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~-~l~s~~~dg~i~vwd~~~ 1034 (1249)
T 3sfz_A 959 LPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGK-TLISSSEDSVIQVWNWQT 1034 (1249)
T ss_dssp ECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSS-CEEEECSSSBEEEEETTT
T ss_pred cccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCC
Confidence 000 00011223457889999999999876 578999999999999865
No 96
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-30 Score=239.41 Aligned_cols=262 Identities=11% Similarity=0.177 Sum_probs=185.9
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|...|++++|+|++++||+|+.||.|+||+..+.+ +...+ .|...|.+++|+| |++|++++.|++|++||+..++.
T Consensus 16 h~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~--~~~~~-~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~ 91 (902)
T 2oaj_A 16 MSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVE--VVIKL-EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKV 91 (902)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCE--EEEEC-SSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSE
T ss_pred CCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcE--EEEEc-CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcE
Confidence 67899999999999999999999999999876543 23333 4788999999999 88999999999999999976653
Q ss_pred eEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeee---eccCCccccEEEEEEccC-CCE
Q 023500 82 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTIS---ESNNGHSSTIWALSFNAK-GDK 157 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~---~~~~~h~~~v~~~~~~~~-~~~ 157 (281)
+..+. |...|++++|+|+++++++|+.|++|++|+++.......+ +..+. ....+|...|.+++|+|+ +..
T Consensus 92 ---~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~-i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~ 166 (902)
T 2oaj_A 92 ---LTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFK-LDNLQKSSFFPAARLSPIVSIQWNPRDIGT 166 (902)
T ss_dssp ---EEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEE-ECCHHHHHTCSSSCCCCCCEEEEETTEEEE
T ss_pred ---EEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccce-eccccccccccccCCCCeEEEEEccCCCCE
Confidence 33443 6678999999999999999999999999998764311000 00000 123578899999999996 468
Q ss_pred EEEeeCCCcEEEEeCCccccccCCCCc--cccee----EEeecccCcceEEEEeCCCc-eeeecCCCCcEEEEecccCCC
Q 023500 158 LVSCSDDLTIKIWGADITRMQSGDGYA--SWRHL----CTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDL 230 (281)
Q Consensus 158 l~s~~~d~~i~~w~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~ 230 (281)
|++|+.|+.+ +||++..+........ ..... ......|...|.+++|+|++ ++++++.|+.+++|+...+..
T Consensus 167 l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~ 245 (902)
T 2oaj_A 167 VLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHM 245 (902)
T ss_dssp EEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCE
T ss_pred EEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcE
Confidence 9999999999 9998754321100000 00000 00001234679999999987 688999999999998754321
Q ss_pred cCCccceeeeeecc-------------CCCCCeeEEEEcC----CCCeeEEEeCCC-----CeEEEEEc
Q 023500 231 IDGPSYKMLLKKEK-------------AHDMDVNSVQWSP----GERRLLASASDD-----GMIKIWEL 277 (281)
Q Consensus 231 ~~~~~~~~~~~~~~-------------~h~~~v~~~~~~~----~~~~~~~s~~~D-----g~v~iw~~ 277 (281)
.. ...+.... .|..+|++++|++ ++..++++|+.| ..+++|++
T Consensus 246 ~~----~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 246 IM----ARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp EE----EECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEE
T ss_pred EE----EEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEec
Confidence 10 00000001 2456799999964 444678888776 37889985
No 97
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=4.9e-31 Score=223.82 Aligned_cols=211 Identities=12% Similarity=0.207 Sum_probs=163.6
Q ss_pred eeecCCCCCeeEEEEcC-CCCEEEEecCCCcEEEEEecCCCeeEEeEeecCCccceeEEEecC-CCCeEEEEecCCeEEE
Q 023500 41 ATLEGHENEVKSVSWNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP-TMDVLFSCSYDNTIKV 118 (281)
Q Consensus 41 ~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p-~~~~l~s~s~d~~v~~ 118 (281)
....+|...|+|++|+| ++++||+|+.||+|++||+..... .....+.+|...|++++|+| ++++|++++.|++|++
T Consensus 113 ~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~-~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~i 191 (435)
T 4e54_B 113 QKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDK-PTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRL 191 (435)
T ss_dssp CEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSC-CEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred ccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCc-eeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence 34567899999999999 577999999999999999875543 23445678999999999999 5789999999999999
Q ss_pred EeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCc
Q 023500 119 WWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDR 198 (281)
Q Consensus 119 w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (281)
||++... ...+. ....+...+.+++|+|++.+|++|+.||.|++||++.... ..+ ..|..
T Consensus 192 wd~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~------------~~~-~~h~~ 251 (435)
T 4e54_B 192 QDFKGNI------LRVFA-SSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKEL------------WNL-RMHKK 251 (435)
T ss_dssp EETTSCE------EEEEE-CCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBC------------CCS-BCCSS
T ss_pred eeccCCc------eeEEe-ccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCccee------------EEE-ecccc
Confidence 9986431 12221 1223455678999999999999999999999999863221 111 23778
Q ss_pred ceEEEEeCCCc--eeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEE
Q 023500 199 TIFSVHWSREG--IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 276 (281)
Q Consensus 199 ~v~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~ 276 (281)
.|.+++|+|++ ++++++.|+.+++|+....... ..+.....|..+|++++|+|++. +|++++.||.|+|||
T Consensus 252 ~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~------~~~~~~~~h~~~v~~~~~spdg~-~l~s~~~D~~i~iwd 324 (435)
T 4e54_B 252 KVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGK------ASFLYSLPHRHPVNAACFSPDGA-RLLTTDQKSEIRVYS 324 (435)
T ss_dssp CEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSS------SCCSBCCBCSSCEEECCBCTTSS-EEEEEESSSCEEEEE
T ss_pred eEEeeeecCCCceEEEEecCcceeeEEeccccccc------ceEEEeeeccccccceeECCCCC-eeEEEcCCCEEEEEE
Confidence 89999999864 6888999999999987543211 11223357899999999999876 578999999999999
Q ss_pred ccc
Q 023500 277 LAN 279 (281)
Q Consensus 277 ~~~ 279 (281)
+..
T Consensus 325 ~~~ 327 (435)
T 4e54_B 325 ASQ 327 (435)
T ss_dssp SSS
T ss_pred CCC
Confidence 864
No 98
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.98 E-value=8.2e-30 Score=217.19 Aligned_cols=261 Identities=14% Similarity=0.079 Sum_probs=185.8
Q ss_pred CccceeEEEEcCCCCEE-EEeeCCCcEEEEecC--CCceeeeeeec--CCCCCeeEEEEcCCCCEEEEecCCCcEEEEEe
Q 023500 2 HTRTVRSCAWSPSGKLL-ATASFDATTCIWEDV--GGDYECVATLE--GHENEVKSVSWNASGTLLATCGRDKSVWIWEV 76 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l-~tg~~d~~i~lw~~~--~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~ 76 (281)
|...|++++|+|++++| ++|+.|+.|+|||.. ++. ++..+. .|...|.+++|+|++++|++|+.|+.+++|++
T Consensus 101 ~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~--~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~ 178 (450)
T 2vdu_B 101 IYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKN--VLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDI 178 (450)
T ss_dssp CCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSS--CEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred cCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCc--eeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEec
Confidence 44579999999999996 899999999999987 543 344444 57789999999999999999999999999998
Q ss_pred cCCCeeE-EeEeecCCccceeEEEecCC---CCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEc
Q 023500 77 MPGNEFE-CVSVLQGHAQDVKMVQWHPT---MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFN 152 (281)
Q Consensus 77 ~~~~~~~-~~~~~~~~~~~v~~v~~~p~---~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 152 (281)
....... +...+.+|...|++++|+|+ +.++++++.|++|++|++.... ++..+ ..+|...|.+++|+
T Consensus 179 ~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~-----~~~~~---~~~h~~~v~~~~~s 250 (450)
T 2vdu_B 179 NSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCF-----IVDKW---LFGHKHFVSSICCG 250 (450)
T ss_dssp TSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTT-----CEEEE---CCCCSSCEEEEEEC
T ss_pred CCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCc-----eeeee---ecCCCCceEEEEEC
Confidence 7654322 33466789999999999999 8899999999999999986542 22221 34788999999999
Q ss_pred cCCCEEEEeeCCCcEEEEeCCccccccCCCCcc-ccee------------EEeecccCcceEEEEeCCCc-eeeecC-CC
Q 023500 153 AKGDKLVSCSDDLTIKIWGADITRMQSGDGYAS-WRHL------------CTISGYHDRTIFSVHWSREG-IIASGA-AD 217 (281)
Q Consensus 153 ~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~-~~~~------------~~~~~~~~~~v~~~~~~~~~-~~~~~~-~d 217 (281)
++.+|++++.|+.|++||+..++......... .... ..........+..+.+++++ ++++++ .+
T Consensus 251 -d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d 329 (450)
T 2vdu_B 251 -KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEAT 329 (450)
T ss_dssp -STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTC
T ss_pred -CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCC
Confidence 99999999999999999987543211000000 0000 00000124567888999876 555565 89
Q ss_pred CcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCC------CCeEEEEEccc
Q 023500 218 DSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASD------DGMIKIWELAN 279 (281)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~------Dg~v~iw~~~~ 279 (281)
+.+++|+.... .... .........| ..|.+++|+|+ ..+++.++. +..|++|.+..
T Consensus 330 ~~i~iw~~~~~---~~~~-l~~~~~~~~~-~~v~~~~~~~~-~~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 330 KCIIILEMSEK---QKGD-LALKQIITFP-YNVISLSAHND-EFQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp SEEEEEEECSS---STTC-EEEEEEEECS-SCEEEEEEETT-EEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred CeEEEEEeccC---CCCc-eeeccEeccC-CceEEEEecCC-cEEEEEecccCCCCCCcceEEEEEEc
Confidence 99999987110 0101 1222333455 78999999994 334444443 55689998653
No 99
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.4e-29 Score=215.75 Aligned_cols=250 Identities=11% Similarity=0.078 Sum_probs=183.5
Q ss_pred ccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCc-eeeeeeec-------------------------------------
Q 023500 3 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGD-YECVATLE------------------------------------- 44 (281)
Q Consensus 3 ~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~-~~~~~~~~------------------------------------- 44 (281)
..++.+++|+|+|++|+++ .++.|.+||..+++ ...+..+.
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 4688999999999977665 57899999987665 11222222
Q ss_pred -----------------CCCCCeeEEEEcCCCCEE-EEecCCCcEEEEEec--CCCeeEEeEeec--CCccceeEEEecC
Q 023500 45 -----------------GHENEVKSVSWNASGTLL-ATCGRDKSVWIWEVM--PGNEFECVSVLQ--GHAQDVKMVQWHP 102 (281)
Q Consensus 45 -----------------~h~~~v~~v~~~~~~~~l-~s~~~d~~v~~w~~~--~~~~~~~~~~~~--~~~~~v~~v~~~p 102 (281)
+|.+.|.+++|+|++++| ++++.|++|++|++. .+.. +..+. .|...|++++|+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~---~~~~~~~~~~~~v~~~~~sp 159 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNV---LKLRKRFCFSKRPNAISIAE 159 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSC---EEEEEEEECSSCEEEEEECT
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCce---eeeeecccCCCCceEEEEcC
Confidence 344579999999999996 899999999999997 4443 23333 5667899999999
Q ss_pred CCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccC---CCEEEEeeCCCcEEEEeCCcccccc
Q 023500 103 TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK---GDKLVSCSDDLTIKIWGADITRMQS 179 (281)
Q Consensus 103 ~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~s~~~d~~i~~w~~~~~~~~~ 179 (281)
++.+|++++.|+.+++|++....... .... ...+|...|.+++|+|+ +.+|++|+.|+.|++||+.....
T Consensus 160 ~~~~l~~~~~~g~v~~~~~~~~~~~~-~~~~----~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~-- 232 (450)
T 2vdu_B 160 DDTTVIIADKFGDVYSIDINSIPEEK-FTQE----PILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFI-- 232 (450)
T ss_dssp TSSEEEEEETTSEEEEEETTSCCCSS-CCCC----CSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTC--
T ss_pred CCCEEEEEeCCCcEEEEecCCccccc-ccce----eeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCce--
Confidence 99999999999999999886543211 0111 22368889999999999 88999999999999999764321
Q ss_pred CCCCcccceeEEeecccCcceEEEEeCCCceeeecCCCCcEEEEecccCCCcCCccceeeee------------------
Q 023500 180 GDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLK------------------ 241 (281)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~------------------ 241 (281)
...+...|...|.+++|+...++++++.|+.+++|+....... ..+..
T Consensus 233 ---------~~~~~~~h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 298 (450)
T 2vdu_B 233 ---------VDKWLFGHKHFVSSICCGKDYLLLSAGGDDKIFAWDWKTGKNL-----STFDYNSLIKPYLNDQHLAPPRF 298 (450)
T ss_dssp ---------EEEECCCCSSCEEEEEECSTTEEEEEESSSEEEEEETTTCCEE-----EEEECHHHHGGGCCTTSBC----
T ss_pred ---------eeeeecCCCCceEEEEECCCCEEEEEeCCCeEEEEECCCCcEe-----eeecchhhhhhhhhhcccccccc
Confidence 2222234778899999993347889999999999987643211 11100
Q ss_pred ---eccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEc
Q 023500 242 ---KEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 277 (281)
Q Consensus 242 ---~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~ 277 (281)
....+...|.+++|+|+++.+++++..|+.|+||++
T Consensus 299 ~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 299 QNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp ------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred cccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 001334578999999988765544448999999998
No 100
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=5.1e-30 Score=212.78 Aligned_cols=218 Identities=26% Similarity=0.414 Sum_probs=172.7
Q ss_pred eeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEEeEeecCCccceeEEEecCC--CCeEEEEecCCeE
Q 023500 39 CVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT--MDVLFSCSYDNTI 116 (281)
Q Consensus 39 ~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~--~~~l~s~s~d~~v 116 (281)
++..+.+|.+.|++++|+|++++|++|+.|+.|++|++... .......+.+|...|++++|+|+ ++++++++.|+.|
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v 81 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGE-THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 81 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETT-EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCC-cceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEE
Confidence 35577899999999999999999999999999999999643 33556778899999999999987 8999999999999
Q ss_pred EEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccC--CCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeec
Q 023500 117 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK--GDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISG 194 (281)
Q Consensus 117 ~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~ 194 (281)
++|++.... ...... ..+|...|.+++|+|+ +.+|++++.|+.|++||+...... .... ..
T Consensus 82 ~iwd~~~~~---~~~~~~----~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~---------~~~~-~~ 144 (379)
T 3jrp_A 82 LIWKEENGR---WSQIAV----HAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT---------SPII-ID 144 (379)
T ss_dssp EEEEEETTE---EEEEEE----ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCC---------CEEE-EE
T ss_pred EEEEcCCCc---eeEeee----ecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCce---------eeEE-ec
Confidence 999886542 112222 2368889999999999 899999999999999998643211 1111 22
Q ss_pred ccCcceEEEEeCC--------------CceeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCC-
Q 023500 195 YHDRTIFSVHWSR--------------EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGE- 259 (281)
Q Consensus 195 ~~~~~v~~~~~~~--------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~- 259 (281)
.|...+.++.|+| ...+++++.|+.+++|+..... ...........|..+|++++|+|++
T Consensus 145 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-----~~~~~~~~~~~h~~~v~~~~~sp~~~ 219 (379)
T 3jrp_A 145 AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA-----QTYVLESTLEGHSDWVRDVAWSPTVL 219 (379)
T ss_dssp CCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTT-----TEEEEEEEECCCSSCEEEEEECCCCS
T ss_pred CCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCC-----cceeeEEEEecccCcEeEEEECCCCC
Confidence 4678899999998 4578999999999999775421 1122334556899999999999983
Q ss_pred -CeeEEEeCCCCeEEEEEccc
Q 023500 260 -RRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 260 -~~~~~s~~~Dg~v~iw~~~~ 279 (281)
..+|++++.||.|+|||+..
T Consensus 220 ~~~~l~s~~~dg~i~iwd~~~ 240 (379)
T 3jrp_A 220 LRSYLASVSQDRTCIIWTQDN 240 (379)
T ss_dssp SSEEEEEEETTSCEEEEEESS
T ss_pred CCCeEEEEeCCCEEEEEeCCC
Confidence 46788999999999999875
No 101
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.98 E-value=5.2e-29 Score=210.43 Aligned_cols=242 Identities=22% Similarity=0.392 Sum_probs=185.0
Q ss_pred ceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEE
Q 023500 5 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFEC 84 (281)
Q Consensus 5 ~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~ 84 (281)
.++.++|+++ ++||+|. |++|+|||..+++...+..+.+|...|++|+|+|+|++|++|+.|++|++||+..++ +
T Consensus 107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~---~ 181 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK---R 181 (420)
T ss_dssp TCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTE---E
T ss_pred cceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCc---E
Confidence 3567999975 5787765 999999999888765555667888999999999999999999999999999997653 5
Q ss_pred eEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeCC
Q 023500 85 VSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDD 164 (281)
Q Consensus 85 ~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 164 (281)
+..+.+|...+.++.++ +..+++|+.|+.+++|+...... .+..+ .+|...+..+.|+|++.++++++.|
T Consensus 182 ~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~----~~~~~----~~h~~~~~~~~~~~~g~~l~s~~~D 251 (420)
T 4gga_A 182 LRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEH----HVATL----SGHSQEVCGLRWAPDGRHLASGGND 251 (420)
T ss_dssp EEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSC----EEEEE----ECCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccce----eeEEe----cccccceeeeeecCCCCeeeeeecc
Confidence 67788999999988775 46899999999999998765421 22222 3788999999999999999999999
Q ss_pred CcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc--eee--ecCCCCcEEEEecccCCCcCCccceeee
Q 023500 165 LTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG--IIA--SGAADDSVQFFVESKDDLIDGPSYKMLL 240 (281)
Q Consensus 165 ~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~--~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 240 (281)
+.+++|+........ ..... ...+...|.++.|++.+ +++ +|+.|+.+++|+..... ..
T Consensus 252 ~~v~i~~~~~~~~~~-------~~~~~-~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~---------~~ 314 (420)
T 4gga_A 252 NLVNVWPSAPGEGGW-------VPLQT-FTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA---------CL 314 (420)
T ss_dssp SCEEEEESSCCSSCS-------CCSEE-ECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTE---------EE
T ss_pred ccceEEeeccccccc-------eeeee-ecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccc---------cc
Confidence 999999986432211 11111 22467889999998753 443 45689999999775421 12
Q ss_pred eeccCCCCCeeEEEEcCCCCeeEEE-eCCCCeEEEEEccc
Q 023500 241 KKEKAHDMDVNSVQWSPGERRLLAS-ASDDGMIKIWELAN 279 (281)
Q Consensus 241 ~~~~~h~~~v~~~~~~~~~~~~~~s-~~~Dg~v~iw~~~~ 279 (281)
.... +...+.++.|+|++..++++ |..|+.|+|||+..
T Consensus 315 ~~~~-~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~ 353 (420)
T 4gga_A 315 SAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT 353 (420)
T ss_dssp EEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT
T ss_pred eeec-cccceeeeeecCCCCeEEEEEecCCCEEEEEECCC
Confidence 2222 33578999999998776654 44799999999865
No 102
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.98 E-value=3.8e-30 Score=218.55 Aligned_cols=251 Identities=15% Similarity=0.296 Sum_probs=177.9
Q ss_pred cceeEEEEcCCC--CEEEEeeCCCcEEEEecCCCcee-------------------------------------eeee-e
Q 023500 4 RTVRSCAWSPSG--KLLATASFDATTCIWEDVGGDYE-------------------------------------CVAT-L 43 (281)
Q Consensus 4 ~~i~~~~~~~~~--~~l~tg~~d~~i~lw~~~~~~~~-------------------------------------~~~~-~ 43 (281)
..|++++|+|++ .+|++++.|+.|++|+...+... +... .
T Consensus 94 ~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
T 3dw8_B 94 EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA 173 (447)
T ss_dssp CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence 779999999998 79999999999999997543221 0112 3
Q ss_pred cCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEEeE-------eecCCccceeEEEecCCC-CeEEEEecCCe
Q 023500 44 EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVS-------VLQGHAQDVKMVQWHPTM-DVLFSCSYDNT 115 (281)
Q Consensus 44 ~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~-------~~~~~~~~v~~v~~~p~~-~~l~s~s~d~~ 115 (281)
.+|...|.+++|+|++++|++| .|+.|++||+.... .... .+.+|...|.+++|+|++ +++++++.|++
T Consensus 174 ~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~ 250 (447)
T 3dw8_B 174 NAHTYHINSISINSDYETYLSA-DDLRINLWHLEITD--RSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGT 250 (447)
T ss_dssp SCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEE--EEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSC
T ss_pred cCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCC--ceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCe
Confidence 6899999999999999999998 79999999986332 2222 356899999999999998 89999999999
Q ss_pred EEEEeCCCCCCCCceeeeeeeeccCCcc------------ccEEEEEEccCCCEEEEeeCCCcEEEEeCCc-cccccCCC
Q 023500 116 IKVWWAEDTDSDNWHCVQTISESNNGHS------------STIWALSFNAKGDKLVSCSDDLTIKIWGADI-TRMQSGDG 182 (281)
Q Consensus 116 v~~w~~~~~~~~~~~~~~~~~~~~~~h~------------~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~-~~~~~~~~ 182 (281)
|++|++........ .+..+ .+|. ..|.+++|+|++++|++++. +.|++||+.. ..+.
T Consensus 251 i~iwd~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~---- 320 (447)
T 3dw8_B 251 IRLCDMRASALCDR-HSKLF----EEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPV---- 320 (447)
T ss_dssp EEEEETTTCSSSCT-TCEEE----CCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCS----
T ss_pred EEEEECcCCccccc-eeeEe----ccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcccc----
Confidence 99999876532100 01111 2343 38999999999999999998 9999999864 2211
Q ss_pred CcccceeEEeecccCc---------------ceEEEEeCCCc-eeeecCCCCcEEEEecccCCCcC---Cc---------
Q 023500 183 YASWRHLCTISGYHDR---------------TIFSVHWSREG-IIASGAADDSVQFFVESKDDLID---GP--------- 234 (281)
Q Consensus 183 ~~~~~~~~~~~~~~~~---------------~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~---~~--------- 234 (281)
..+.. |.. .+..++|++++ ++++++.|+.+++|+........ ..
T Consensus 321 -------~~~~~-~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 392 (447)
T 3dw8_B 321 -------ETYQV-HEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVL 392 (447)
T ss_dssp -------CCEES-CGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBC
T ss_pred -------ceeec-cccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeeccccccccccc
Confidence 01111 111 13348889876 68899999999999876532210 00
Q ss_pred -cc----------eeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEc
Q 023500 235 -SY----------KMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 277 (281)
Q Consensus 235 -~~----------~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~ 277 (281)
.. .........+...|..++|+|++. +||+++.|+ +.+|+-
T Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~-~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 393 KPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKEN-IIAVATTNN-LYIFQD 444 (447)
T ss_dssp CCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSS-EEEEECSSC-EEEEEC
T ss_pred CCccccccCCcccccccccccccCCceeEEEECCCCC-EEEEEecce-eeeecc
Confidence 00 000001123456799999999875 677787665 667763
No 103
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.98 E-value=5.3e-30 Score=225.79 Aligned_cols=246 Identities=16% Similarity=0.295 Sum_probs=193.1
Q ss_pred Cccc-eeEEEEcC--CCCEEEEeeCCCcEEEEecCCC------ceeeeeeecCCCCCeeEEEEcCCCCEEEEecCC----
Q 023500 2 HTRT-VRSCAWSP--SGKLLATASFDATTCIWEDVGG------DYECVATLEGHENEVKSVSWNASGTLLATCGRD---- 68 (281)
Q Consensus 2 h~~~-i~~~~~~~--~~~~l~tg~~d~~i~lw~~~~~------~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d---- 68 (281)
|... |++++|+| ++++||+|+.|+.|++||..++ .......+.+|...|.+++|+|++++|++++.|
T Consensus 62 h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~ 141 (615)
T 1pgu_A 62 HGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNF 141 (615)
T ss_dssp TTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCS
T ss_pred CCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCc
Confidence 6788 99999999 9999999999999999998654 445677888999999999999999999999988
Q ss_pred CcEEEEEecCCCeeEEeEeecCCccceeEEEecCCCC-eEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccc---
Q 023500 69 KSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS--- 144 (281)
Q Consensus 69 ~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~-~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~--- 144 (281)
+.|++||. +. ....+.+|...|.+++|+|++. .+++++.|+.|++|+.... +.+..+ .+|..
T Consensus 142 ~~v~~~d~--~~---~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~-----~~~~~~----~~~~~~~~ 207 (615)
T 1pgu_A 142 GVFISWDS--GN---SLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPF-----KFSASD----RTHHKQGS 207 (615)
T ss_dssp EEEEETTT--CC---EEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTB-----EEEEEE----CSSSCTTC
T ss_pred cEEEEEEC--CC---cceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCc-----ceeeee----cccCCCCc
Confidence 68888883 22 4567789999999999999998 7999999999999986543 233333 35777
Q ss_pred cEEEEEEccC-CCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeec---ccCcceEEEEeCCCceeeecCCCCcE
Q 023500 145 TIWALSFNAK-GDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISG---YHDRTIFSVHWSREGIIASGAADDSV 220 (281)
Q Consensus 145 ~v~~~~~~~~-~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~d~~~ 220 (281)
.|.+++|+|+ +++|++++.|+.|++||+...+. ...+.. .|...+.++.|+....+++++.|+.+
T Consensus 208 ~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~-----------~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i 276 (615)
T 1pgu_A 208 FVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEF-----------LKYIEDDQEPVQGGIFALSWLDSQKFATVGADATI 276 (615)
T ss_dssp CEEEEEECSTTCCEEEEEETTCCEEEEETTTCCE-----------EEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEE
T ss_pred eEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCE-----------eEEecccccccCCceEEEEEcCCCEEEEEcCCCcE
Confidence 8999999999 99999999999999999864321 222212 47788999999944478889999999
Q ss_pred EEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 221 QFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
++|+..... ...........+...+.++.|. ++. ++++++.||.|++||+..
T Consensus 277 ~~wd~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~~~~~~g~i~~~d~~~ 328 (615)
T 1pgu_A 277 RVWDVTTSK-----CVQKWTLDKQQLGNQQVGVVAT-GNG-RIISLSLDGTLNFYELGH 328 (615)
T ss_dssp EEEETTTTE-----EEEEEECCTTCGGGCEEEEEEE-ETT-EEEEEETTSCEEEEETTE
T ss_pred EEEECCCCc-----EEEEEcCCCCcccCceeEEEeC-CCC-eEEEEECCCCEEEEECCC
Confidence 999775321 1111111112234678888886 444 578999999999999764
No 104
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=2.1e-29 Score=206.58 Aligned_cols=239 Identities=8% Similarity=0.018 Sum_probs=182.5
Q ss_pred CccceeEEEEcCCCC-EEEEeeCCCcEEEEec-CCCceeeeeeecC--CCCCeeEEEEcCCCCEEEEecCCCcEEEEEec
Q 023500 2 HTRTVRSCAWSPSGK-LLATASFDATTCIWED-VGGDYECVATLEG--HENEVKSVSWNASGTLLATCGRDKSVWIWEVM 77 (281)
Q Consensus 2 h~~~i~~~~~~~~~~-~l~tg~~d~~i~lw~~-~~~~~~~~~~~~~--h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~ 77 (281)
|...|++++|+|+++ +|++|+.|+.|++|+. .++. ...+.+ |...|.+++|+| +.+|++++.|+.|++||+.
T Consensus 55 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~---~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~ 130 (342)
T 1yfq_A 55 YKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPS---FQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPR 130 (342)
T ss_dssp CSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSS---EEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHH
T ss_pred cCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCc---eEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEccc
Confidence 678999999999999 9999999999999998 7664 356778 999999999999 9999999999999999987
Q ss_pred CCC--e----eEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCC-CCCCCceeeeeeeeccCCccccEEEEE
Q 023500 78 PGN--E----FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAED-TDSDNWHCVQTISESNNGHSSTIWALS 150 (281)
Q Consensus 78 ~~~--~----~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~-~~~~~~~~~~~~~~~~~~h~~~v~~~~ 150 (281)
... . ..++..+. |...+.+++|+|++ +++++.|+.|++|++.. .... .. .....|...+.+++
T Consensus 131 ~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~----~~---~~~~~~~~~i~~i~ 200 (342)
T 1yfq_A 131 NYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDN----GT---IEESGLKYQIRDVA 200 (342)
T ss_dssp HHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCC----CE---EEECSCSSCEEEEE
T ss_pred ccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCcccccc----ce---eeecCCCCceeEEE
Confidence 410 0 11233344 88889999999987 99999999999999876 3211 11 11235678899999
Q ss_pred Ecc-CCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeec--------ccCcceEEEEeCCCc-eeeecCCCCcE
Q 023500 151 FNA-KGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISG--------YHDRTIFSVHWSREG-IIASGAADDSV 220 (281)
Q Consensus 151 ~~~-~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~v~~~~~~~~~-~~~~~~~d~~~ 220 (281)
|+| ++.++++++.||.+++|+.+....... ......+.. .+...+.+++|++++ ++++++.|+.+
T Consensus 201 ~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i 275 (342)
T 1yfq_A 201 LLPKEQEGYACSSIDGRVAVEFFDDQGDDYN-----SSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGII 275 (342)
T ss_dssp ECSGGGCEEEEEETTSEEEEEECCTTCCSTT-----CTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCE
T ss_pred ECCCCCCEEEEEecCCcEEEEEEcCCCcccc-----cccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceE
Confidence 999 999999999999999998865310000 011111211 123489999999876 68889999999
Q ss_pred EEEecccCCCcCCccceeeeeeccCC-CCCeeEEEEcCCCCeeEEEeCCCCe
Q 023500 221 QFFVESKDDLIDGPSYKMLLKKEKAH-DMDVNSVQWSPGERRLLASASDDGM 271 (281)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~~s~~~Dg~ 271 (281)
++|+.... ........| ..+|++++ |++. +|++++.||.
T Consensus 276 ~vwd~~~~---------~~~~~~~~~h~~~v~~~~--~~~~-~l~s~s~Dg~ 315 (342)
T 1yfq_A 276 SCWNLQTR---------KKIKNFAKFNEDSVVKIA--CSDN-ILCLATSDDT 315 (342)
T ss_dssp EEEETTTT---------EEEEECCCCSSSEEEEEE--ECSS-EEEEEEECTH
T ss_pred EEEcCccH---------hHhhhhhcccCCCceEec--CCCC-eEEEEecCCc
Confidence 99977532 223345566 89999999 7765 6889999998
No 105
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=2.6e-29 Score=205.71 Aligned_cols=227 Identities=20% Similarity=0.401 Sum_probs=170.4
Q ss_pred eecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCC-eeEEeEeecCCccceeEEEecC--CCCeEEEEecCCeEEE
Q 023500 42 TLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN-EFECVSVLQGHAQDVKMVQWHP--TMDVLFSCSYDNTIKV 118 (281)
Q Consensus 42 ~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~-~~~~~~~~~~~~~~v~~v~~~p--~~~~l~s~s~d~~v~~ 118 (281)
.+.+|.+.|++++|+|++++|++|+.|+.|++|++.... .......+.+|...|.+++|+| ++++|++++.|+.|++
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~v 85 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKL 85 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEE
Confidence 457899999999999999999999999999999997543 3345677789999999999999 5899999999999999
Q ss_pred EeCCCCCCCC----ceeeeeeeeccCCccccEEEEEEccC--CCEEEEeeCCCcEEEEeCCccccccCCCCcc-cceeEE
Q 023500 119 WWAEDTDSDN----WHCVQTISESNNGHSSTIWALSFNAK--GDKLVSCSDDLTIKIWGADITRMQSGDGYAS-WRHLCT 191 (281)
Q Consensus 119 w~~~~~~~~~----~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~-~~~~~~ 191 (281)
|+++...... ++.+.. ..+|...|.+++|+|+ +.+|++++.|+.|++||+............. ......
T Consensus 86 wd~~~~~~~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 161 (351)
T 3f3f_A 86 WEEDPDQEECSGRRWNKLCT----LNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSI 161 (351)
T ss_dssp EEECTTSCTTSSCSEEEEEE----ECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSC
T ss_pred EecCCCcccccccCcceeee----ecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccc
Confidence 9987643211 122222 2468899999999999 9999999999999999986543221100000 000001
Q ss_pred eecccCcceEEEEeCCC----ceeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCC---eeEE
Q 023500 192 ISGYHDRTIFSVHWSRE----GIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGER---RLLA 264 (281)
Q Consensus 192 ~~~~~~~~v~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~---~~~~ 264 (281)
....+...+.++.|+|+ ..+++++.++.+.++...... ........+|...|++++|+|++. .+|+
T Consensus 162 ~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~ 234 (351)
T 3f3f_A 162 PPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGK-------LHVAAKLPGHKSLIRSISWAPSIGRWYQLIA 234 (351)
T ss_dssp CCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSC-------EEEEEECCCCCSCEEEEEECCCSSCSSEEEE
T ss_pred ccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCc-------eeeeeecCCCCcceeEEEECCCCCCcceEEE
Confidence 11135677889999884 578888899888777543321 122344567999999999999863 5789
Q ss_pred EeCCCCeEEEEEccc
Q 023500 265 SASDDGMIKIWELAN 279 (281)
Q Consensus 265 s~~~Dg~v~iw~~~~ 279 (281)
+++.||.|++||+..
T Consensus 235 s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 235 TGCKDGRIRIFKITE 249 (351)
T ss_dssp EEETTSCEEEEEEEE
T ss_pred EEcCCCeEEEEeCCC
Confidence 999999999999875
No 106
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.2e-30 Score=212.17 Aligned_cols=236 Identities=9% Similarity=0.036 Sum_probs=166.7
Q ss_pred EcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCC------eeEE
Q 023500 11 WSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN------EFEC 84 (281)
Q Consensus 11 ~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~------~~~~ 84 (281)
+.+++++|++|+.|+.|++||..+++. +..+. ...|.++.|+|+ +++++.|++|++|+..... ..+.
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~--~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~ 116 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKT--ITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKV 116 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSC--EEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCE
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcE--EEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcce
Confidence 345778999999999999999877653 33433 467888889988 9999999999999765210 1111
Q ss_pred e-EeecCCccceeEEEecC--CCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEe
Q 023500 85 V-SVLQGHAQDVKMVQWHP--TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 161 (281)
Q Consensus 85 ~-~~~~~~~~~v~~v~~~p--~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 161 (281)
+ ....+|...|.+++|+| +++++++++.|++|++|+++... +.... ...|...+.+++|+|++.+|++|
T Consensus 117 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~-----~~~~~---~~~~~~~i~~~~~~pdg~~lasg 188 (343)
T 3lrv_A 117 LREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS-----QYIVH---SAKSDVEYSSGVLHKDSLLLALY 188 (343)
T ss_dssp EEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSC-----EEEEE---CCCSSCCCCEEEECTTSCEEEEE
T ss_pred eEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc-----EEEEE---ecCCCCceEEEEECCCCCEEEEE
Confidence 2 22236778899999999 99999999999999999987543 21111 12355679999999999999999
Q ss_pred eCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCce-eeecCCCCcEEEEecccCCCcCCccceeee
Q 023500 162 SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSVQFFVESKDDLIDGPSYKMLL 240 (281)
Q Consensus 162 ~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 240 (281)
+.|+.|++||++..... ...+...|..+|.+++|+|++. +++++ ++.+++|+.+...... .+
T Consensus 189 ~~dg~i~iwd~~~~~~~----------~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~------~~ 251 (343)
T 3lrv_A 189 SPDGILDVYNLSSPDQA----------SSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTL------AY 251 (343)
T ss_dssp CTTSCEEEEESSCTTSC----------CEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCB------SS
T ss_pred cCCCEEEEEECCCCCCC----------ccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcce------ee
Confidence 99999999998743211 0122223788999999999875 55555 6699999886542211 01
Q ss_pred eeccCCCCCee--EEEEcCCCCeeEEEeCC-CCeEEEEEccc
Q 023500 241 KKEKAHDMDVN--SVQWSPGERRLLASASD-DGMIKIWELAN 279 (281)
Q Consensus 241 ~~~~~h~~~v~--~~~~~~~~~~~~~s~~~-Dg~v~iw~~~~ 279 (281)
.....|..++. +++|+|+++. |++++. |+.++||++..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~g~~-l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 252 PTYTIPEFKTGTVTYDIDDSGKN-MIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp CCCBC-----CCEEEEECTTSSE-EEEEETTTTEEEEEEECT
T ss_pred cccccccccccceEEEECCCCCE-EEEecCCCCcEEEEEEcc
Confidence 11112333444 6999998864 666666 99999998743
No 107
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.9e-30 Score=217.60 Aligned_cols=236 Identities=14% Similarity=0.214 Sum_probs=171.2
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCC-----CeeEEEEcCCCCEEEEecCCCcEEEEEe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHEN-----EVKSVSWNASGTLLATCGRDKSVWIWEV 76 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~-----~v~~v~~~~~~~~l~s~~~d~~v~~w~~ 76 (281)
|.+.|++++|+|+|++||+++.||.++||+..+ ++..+. |.. .|.+++|||+|++|++|+.||+|++|++
T Consensus 84 ~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~----~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~ 158 (588)
T 2j04_A 84 PVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK----MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSI 158 (588)
T ss_dssp CSCCEEEEEECSSSSCEEEEETTSCEEEEETTE----EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEEC
T ss_pred CCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc----eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEEC
Confidence 467899999999999999999999999998533 566667 665 5999999999999999999999999999
Q ss_pred cCCCe----eEEeEee----cCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEE
Q 023500 77 MPGNE----FECVSVL----QGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWA 148 (281)
Q Consensus 77 ~~~~~----~~~~~~~----~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 148 (281)
..+.. +-.+.++ .+|...|.+++|+|++ +++++.|++|++|++...... ....++ ..+|+..|.+
T Consensus 159 ~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~--~~~~tL---~~~h~~~V~s 231 (588)
T 2j04_A 159 RKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQ--PVSRMI---QNASRRKITD 231 (588)
T ss_dssp CCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSC--CCEEEE---ECCCSSCCCC
T ss_pred CCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccc--cceeee---cccccCcEEE
Confidence 76531 0123444 6788899999999998 889999999999988654310 001112 1368889999
Q ss_pred EEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEe--CCCc-eeeecCCCCcEEEEec
Q 023500 149 LSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHW--SREG-IIASGAADDSVQFFVE 225 (281)
Q Consensus 149 ~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~-~~~~~~~d~~~~~~~~ 225 (281)
++|+ +..|++++ +++|++||....+ .......|...+..+.+ ++++ .+++++.+|. ++|..
T Consensus 232 vaFs--g~~LASa~-~~tIkLWd~~~~~------------~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~ 295 (588)
T 2j04_A 232 LKIV--DYKVVLTC-PGYVHKIDLKNYS------------ISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLE 295 (588)
T ss_dssp EEEE--TTEEEEEC-SSEEEEEETTTTE------------EEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEES
T ss_pred EEEE--CCEEEEEe-CCeEEEEECCCCe------------EEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEee
Confidence 9999 57898887 6999999986432 11222247888999999 8887 5677777888 88875
Q ss_pred c-----cCCCcC----------CccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCC
Q 023500 226 S-----KDDLID----------GPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASD 268 (281)
Q Consensus 226 ~-----~~~~~~----------~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~ 268 (281)
. .+.... ...... +. ...+...|.+++|+|+|+ ++|+++.
T Consensus 296 d~~~~spd~~l~a~~d~~v~lW~~~g~~-l~-~~~~~~~I~~va~SPdG~-~lA~~~~ 350 (588)
T 2j04_A 296 DELHVTADNIIAPYLEKKFKKWSTIWNE-FN-NYETTLVIHGISLSPDGY-SIAIVYD 350 (588)
T ss_dssp SSEEEECCCSSHHHHHHHHHHTTTTTTS-SS-SSCCEEEEEEEEECTTSS-EEEEEEE
T ss_pred ccEEECCCceEEEEcCCEEEEEECCCCc-ee-eeccceEEEEEEECCCCC-EEEEEEe
Confidence 2 111100 000000 11 112244589999999985 5777653
No 108
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=2.2e-28 Score=207.94 Aligned_cols=235 Identities=28% Similarity=0.569 Sum_probs=183.5
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|...|++++|+ ++++++|+.|+.|++||..+++ ++..+.+|...|.++.|+ +..+++|+.|++|++||+..+.
T Consensus 158 h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~- 230 (445)
T 2ovr_B 158 HTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGE--CIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQ- 230 (445)
T ss_dssp CSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCC-
T ss_pred CCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCc--EEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCc-
Confidence 77889999997 6799999999999999987764 567788999999999985 5789999999999999987654
Q ss_pred eEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEe
Q 023500 82 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 161 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 161 (281)
+...+.+|...|.++.| ++..+++++.|+.|++|++... +++..+ .+|...|.++.| ++.+++++
T Consensus 231 --~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~-----~~~~~~----~~~~~~v~~~~~--~~~~l~~~ 295 (445)
T 2ovr_B 231 --CLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETE-----TCLHTL----QGHTNRVYSLQF--DGIHVVSG 295 (445)
T ss_dssp --EEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGT-----EEEEEE----CCCSSCEEEEEE--CSSEEEEE
T ss_pred --EEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCC-----cEeEEe----cCCCCceEEEEE--CCCEEEEE
Confidence 35667789999999998 6778999999999999987653 223333 368889999999 67899999
Q ss_pred eCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecCCCCcEEEEecccCCCcCCccceeeee
Q 023500 162 SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLK 241 (281)
Q Consensus 162 ~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 241 (281)
+.|+.|++||....+. ...+. .|...+.++.++ +..+++++.|+.+++|+..... .. ..+.
T Consensus 296 ~~d~~i~i~d~~~~~~-----------~~~~~-~~~~~v~~~~~~-~~~l~~~~~dg~i~vwd~~~~~-----~~-~~~~ 356 (445)
T 2ovr_B 296 SLDTSIRVWDVETGNC-----------IHTLT-GHQSLTSGMELK-DNILVSGNADSTVKIWDIKTGQ-----CL-QTLQ 356 (445)
T ss_dssp ETTSCEEEEETTTCCE-----------EEEEC-CCCSCEEEEEEE-TTEEEEEETTSCEEEEETTTCC-----EE-EEEC
T ss_pred eCCCeEEEEECCCCCE-----------EEEEc-CCcccEEEEEEe-CCEEEEEeCCCeEEEEECCCCc-----EE-EEEc
Confidence 9999999999864321 22222 356677788775 4588899999999999775421 11 1122
Q ss_pred eccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEcccC
Q 023500 242 KEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANT 280 (281)
Q Consensus 242 ~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~~ 280 (281)
....|...|++++|++ .++++++.||.|++||+...
T Consensus 357 ~~~~~~~~v~~~~~~~---~~l~s~~~dg~v~iwd~~~~ 392 (445)
T 2ovr_B 357 GPNKHQSAVTCLQFNK---NFVITSSDDGTVKLWDLKTG 392 (445)
T ss_dssp STTSCSSCEEEEEECS---SEEEEEETTSEEEEEETTTC
T ss_pred cCCCCCCCEEEEEECC---CEEEEEeCCCeEEEEECCCC
Confidence 2335889999999974 36889999999999998753
No 109
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=3.3e-28 Score=206.92 Aligned_cols=232 Identities=24% Similarity=0.504 Sum_probs=184.1
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
|.+.|.. +++++|++|++|+.||.|++||..+++ ++..+.+|.+.|.+++|+ +.++++|+.|++|++||+..++
T Consensus 117 h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~- 190 (445)
T 2ovr_B 117 HDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGK--CLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGE- 190 (445)
T ss_dssp STTSCEE-EEEEETTEEEEEETTSCEEEEETTTCC--EEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTE-
T ss_pred cCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCc--EEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCc-
Confidence 5555433 355679999999999999999987764 467888999999999997 5799999999999999997653
Q ss_pred eEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEe
Q 023500 82 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 161 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 161 (281)
....+.+|...|.++.|++ +.+++++.|++|++|++.... .+..+ .+|...|.+++| ++.++++|
T Consensus 191 --~~~~~~~h~~~v~~~~~~~--~~l~s~s~dg~i~~wd~~~~~-----~~~~~----~~~~~~v~~~~~--~~~~l~~~ 255 (445)
T 2ovr_B 191 --CIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQ-----CLHVL----MGHVAAVRCVQY--DGRRVVSG 255 (445)
T ss_dssp --EEEEECCCSSCEEEEEEET--TEEEEEETTSEEEEEESSSCC-----EEEEE----ECCSSCEEEEEE--CSSCEEEE
T ss_pred --EEEEECCCCCcEEEEEecC--CEEEEEeCCCEEEEEECCCCc-----EEEEE----cCCcccEEEEEE--CCCEEEEE
Confidence 4677889999999999964 679999999999999887542 23333 368889999999 67799999
Q ss_pred eCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecCCCCcEEEEecccCCCcCCccceeeee
Q 023500 162 SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLK 241 (281)
Q Consensus 162 ~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 241 (281)
+.|+.|++||.+... ....+. .|...+.++.+ ....+++++.|+.+++|+.... ....
T Consensus 256 ~~dg~i~iwd~~~~~-----------~~~~~~-~~~~~v~~~~~-~~~~l~~~~~d~~i~i~d~~~~---------~~~~ 313 (445)
T 2ovr_B 256 AYDFMVKVWDPETET-----------CLHTLQ-GHTNRVYSLQF-DGIHVVSGSLDTSIRVWDVETG---------NCIH 313 (445)
T ss_dssp ETTSCEEEEEGGGTE-----------EEEEEC-CCSSCEEEEEE-CSSEEEEEETTSCEEEEETTTC---------CEEE
T ss_pred cCCCEEEEEECCCCc-----------EeEEec-CCCCceEEEEE-CCCEEEEEeCCCeEEEEECCCC---------CEEE
Confidence 999999999976432 122222 46788999998 5567899999999999977542 1233
Q ss_pred eccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 242 KEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 242 ~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
....|...+.++.+++ . ++++++.||.|++||+..
T Consensus 314 ~~~~~~~~v~~~~~~~--~-~l~~~~~dg~i~vwd~~~ 348 (445)
T 2ovr_B 314 TLTGHQSLTSGMELKD--N-ILVSGNADSTVKIWDIKT 348 (445)
T ss_dssp EECCCCSCEEEEEEET--T-EEEEEETTSCEEEEETTT
T ss_pred EEcCCcccEEEEEEeC--C-EEEEEeCCCeEEEEECCC
Confidence 4457888899988864 3 678999999999999864
No 110
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=1.9e-28 Score=202.56 Aligned_cols=257 Identities=15% Similarity=0.181 Sum_probs=171.4
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEE-EEecCCCcEEEEEecCCC
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLL-ATCGRDKSVWIWEVMPGN 80 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~~~d~~v~~w~~~~~~ 80 (281)
|...|++++|+|||++||+|+.|+ ++||+..+... .... +...+..+++.++++.+ ++++.|++|++||+..++
T Consensus 18 h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~ 92 (355)
T 3vu4_A 18 VSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAH--IMSQ--EMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQ 92 (355)
T ss_dssp -CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEE--EEEE--ECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTE
T ss_pred CCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcce--eeee--ecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCc
Confidence 778999999999999999998775 78999765432 2222 22357889999988876 678888999999987654
Q ss_pred eeEEeEeecCCccceeEEEecCCCC-----------------------------------eEEE--EecCCeEEEEeCCC
Q 023500 81 EFECVSVLQGHAQDVKMVQWHPTMD-----------------------------------VLFS--CSYDNTIKVWWAED 123 (281)
Q Consensus 81 ~~~~~~~~~~~~~~v~~v~~~p~~~-----------------------------------~l~s--~s~d~~v~~w~~~~ 123 (281)
. +..+. +...|.+++++|+.. .++. ++.||.|++|++..
T Consensus 93 ~---~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~ 168 (355)
T 3vu4_A 93 D---VSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQS 168 (355)
T ss_dssp E---EEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC
T ss_pred E---EEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCC
Confidence 3 33333 455788888877531 2222 35556666665543
Q ss_pred CCCCC---ce----eeeeeeeccCCccccEEEEEEccCCCEEEEeeCCCc-EEEEeCCccccccCCCCcccceeEEee-c
Q 023500 124 TDSDN---WH----CVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLT-IKIWGADITRMQSGDGYASWRHLCTIS-G 194 (281)
Q Consensus 124 ~~~~~---~~----~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~-i~~w~~~~~~~~~~~~~~~~~~~~~~~-~ 194 (281)
..... .. ..........+|...|.+++|+|++++|++|+.|++ |++||+..++ ....+. +
T Consensus 169 ~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~-----------~~~~~~~g 237 (355)
T 3vu4_A 169 SGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV-----------LVREFRRG 237 (355)
T ss_dssp ------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCC-----------EEEEEECT
T ss_pred CCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc-----------EEEEEEcC
Confidence 21000 00 000001223579999999999999999999999998 9999986432 233444 3
Q ss_pred ccCcceEEEEeCCCc-eeeecCCCCcEEEEecccCCCcCCccce--------------eeeeeccCCCCCeeEEEEcCCC
Q 023500 195 YHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYK--------------MLLKKEKAHDMDVNSVQWSPGE 259 (281)
Q Consensus 195 ~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~h~~~v~~~~~~~~~ 259 (281)
.|...|.+++|+|++ ++++++.|+.+++|+............. ........+..+...++|++++
T Consensus 238 ~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~ 317 (355)
T 3vu4_A 238 LDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISES 317 (355)
T ss_dssp TCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSS
T ss_pred CCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCC
Confidence 378899999999976 6888999999999988643211100000 0001111223345779999987
Q ss_pred CeeEEEeCCCCeEEEEEccc
Q 023500 260 RRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 260 ~~~~~s~~~Dg~v~iw~~~~ 279 (281)
. .+++++.||.+++|++..
T Consensus 318 ~-~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 318 S-LVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp E-EEEEETTTTEEEEEEEEE
T ss_pred C-EEEEEeCCCeEEEEEEEc
Confidence 5 577888899999999754
No 111
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=8.6e-29 Score=209.73 Aligned_cols=220 Identities=23% Similarity=0.401 Sum_probs=170.3
Q ss_pred eeecCCCCCeeEEEEcCC-CCEEEEecCCCcEEEEEecCC-------CeeEEeEeecCCccceeEEEecCCCC-eEEEEe
Q 023500 41 ATLEGHENEVKSVSWNAS-GTLLATCGRDKSVWIWEVMPG-------NEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCS 111 (281)
Q Consensus 41 ~~~~~h~~~v~~v~~~~~-~~~l~s~~~d~~v~~w~~~~~-------~~~~~~~~~~~~~~~v~~v~~~p~~~-~l~s~s 111 (281)
....+|.+.|++++|+|+ +.+|++++.|+.|++|++... ........+.+|...+.+++|+|++. +|++++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 344579999999999997 789999999999999999751 11234567789999999999999988 999999
Q ss_pred cCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEcc-CCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeE
Q 023500 112 YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNA-KGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLC 190 (281)
Q Consensus 112 ~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~ 190 (281)
.|++|++|++........ .........+|...|.+++|+| ++.+|++++.|+.|++||++..... +...
T Consensus 202 ~dg~i~vwd~~~~~~~~~--~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~--------~~~~ 271 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHR--VIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTS--------KPSH 271 (430)
T ss_dssp TTSCEEEEETTSCCBGGG--EEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSS--------SCSE
T ss_pred CCCeEEEEeCCCCCCCCc--eeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCC--------ccee
Confidence 999999999876322111 1111122247889999999999 6779999999999999998743210 1112
Q ss_pred EeecccCcceEEEEeCCCc--eeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCC
Q 023500 191 TISGYHDRTIFSVHWSREG--IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASD 268 (281)
Q Consensus 191 ~~~~~~~~~v~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~ 268 (281)
.+ ..|...+.+++|++++ ++++++.|+.+++|+..... ........|...|++++|+|+++.+|++++.
T Consensus 272 ~~-~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~--------~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~ 342 (430)
T 2xyi_A 272 TV-DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK--------LKLHSFESHKDEIFQVQWSPHNETILASSGT 342 (430)
T ss_dssp EE-ECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT--------SCSEEEECCSSCEEEEEECSSCTTEEEEEET
T ss_pred Ee-ecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC--------CCeEEeecCCCCEEEEEECCCCCCEEEEEeC
Confidence 22 2477889999999976 58899999999999875421 1122344688999999999998778999999
Q ss_pred CCeEEEEEccc
Q 023500 269 DGMIKIWELAN 279 (281)
Q Consensus 269 Dg~v~iw~~~~ 279 (281)
|+.|+|||+..
T Consensus 343 d~~i~iwd~~~ 353 (430)
T 2xyi_A 343 DRRLHVWDLSK 353 (430)
T ss_dssp TSCCEEEEGGG
T ss_pred CCcEEEEeCCC
Confidence 99999999875
No 112
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=1.6e-28 Score=204.83 Aligned_cols=214 Identities=12% Similarity=0.214 Sum_probs=168.5
Q ss_pred eeeeeecCCCCCeeEEEEcCCC-CEEEEecCCCcEEEEEecCCCeeEEeEeecCCccceeEEEecC-CCCeEEEEecCCe
Q 023500 38 ECVATLEGHENEVKSVSWNASG-TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP-TMDVLFSCSYDNT 115 (281)
Q Consensus 38 ~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p-~~~~l~s~s~d~~ 115 (281)
.....+.+|...|++++|+|++ ++|++|+.|+.|++||+...... ......+|...|.+++|+| ++.++++++.|+.
T Consensus 64 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~ 142 (383)
T 3ei3_B 64 KLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKT-SFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGA 142 (383)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCE-EEECCCSTTCBEEEEEEETTEEEEEEEEETTTE
T ss_pred ceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccc-eeeecCCcCCceeEEEeCCCCCCEEEEEeCCCE
Confidence 4466788999999999999998 99999999999999999765532 2333347999999999999 6789999999999
Q ss_pred EEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecc
Q 023500 116 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGY 195 (281)
Q Consensus 116 v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (281)
|++|++... ....+. ...+|...|.+++|+|++.+|++|+.|+.|++||++.. ....+. .
T Consensus 143 i~iwd~~~~------~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~------------~~~~~~-~ 202 (383)
T 3ei3_B 143 TTLRDFSGS------VIQVFA-KTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGH------------EIFKEK-L 202 (383)
T ss_dssp EEEEETTSC------EEEEEE-CCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSC------------EEEEEE-C
T ss_pred EEEEECCCC------ceEEEe-ccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCC------------EEEEec-c
Confidence 999998742 222222 22346688999999999999999999999999997421 122222 4
Q ss_pred cCcceEEEEeCCCc--eeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcC-CCCeeEEEeCCCCeE
Q 023500 196 HDRTIFSVHWSREG--IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSP-GERRLLASASDDGMI 272 (281)
Q Consensus 196 ~~~~v~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~~s~~~Dg~v 272 (281)
|...+.+++|++++ ++++++.|+.+++|+....... ....... .|...|++++|+| ++. +|++++.|+.|
T Consensus 203 h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~-----~~~~~~~-~~~~~v~~~~~s~~~~~-~l~~~~~d~~i 275 (383)
T 3ei3_B 203 HKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDK-----NSYIAEM-PHEKPVNAAYFNPTDST-KLLTTDQRNEI 275 (383)
T ss_dssp SSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCST-----TCEEEEE-ECSSCEEEEEECTTTSC-EEEEEESSSEE
T ss_pred CCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcc-----cceEEEe-cCCCceEEEEEcCCCCC-EEEEEcCCCcE
Confidence 78899999999986 6899999999999987642211 1112222 5889999999999 765 67899999999
Q ss_pred EEEEccc
Q 023500 273 KIWELAN 279 (281)
Q Consensus 273 ~iw~~~~ 279 (281)
++||+..
T Consensus 276 ~iwd~~~ 282 (383)
T 3ei3_B 276 RVYSSYD 282 (383)
T ss_dssp EEEETTB
T ss_pred EEEECCC
Confidence 9999865
No 113
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.2e-27 Score=197.67 Aligned_cols=221 Identities=21% Similarity=0.344 Sum_probs=170.2
Q ss_pred ceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEecCCe
Q 023500 36 DYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT 115 (281)
Q Consensus 36 ~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~ 115 (281)
.......+.+|.+.|++++|+|++++|++++.|+.|++||+..+. .+..+.+|...|.+++|+|+++++++++.|+.
T Consensus 21 ~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 97 (369)
T 3zwl_B 21 SHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGE---RLGTLDGHTGTIWSIDVDCFTKYCVTGSADYS 97 (369)
T ss_dssp CSEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCC---EEEEECCCSSCEEEEEECTTSSEEEEEETTTE
T ss_pred cccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCch---hhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 334456788999999999999999999999999999999987654 45678899999999999999999999999999
Q ss_pred EEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeCC-----CcEEEEeCCccccccCCCCcccceeE
Q 023500 116 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDD-----LTIKIWGADITRMQSGDGYASWRHLC 190 (281)
Q Consensus 116 v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----~~i~~w~~~~~~~~~~~~~~~~~~~~ 190 (281)
|++|++.... ++..+. |...+.+++|+|++.+|++++.+ +.|++||...................
T Consensus 98 i~iwd~~~~~-----~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~ 167 (369)
T 3zwl_B 98 IKLWDVSNGQ-----CVATWK-----SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIH 167 (369)
T ss_dssp EEEEETTTCC-----EEEEEE-----CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSE
T ss_pred EEEEECCCCc-----EEEEee-----cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceee
Confidence 9999887542 233332 56789999999999999999999 99999987643321110000001111
Q ss_pred EeecccCc--ceEEEEeCCCc-eeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeC
Q 023500 191 TISGYHDR--TIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASAS 267 (281)
Q Consensus 191 ~~~~~~~~--~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~ 267 (281)
... .+.. .+.+++|++++ .+++++.|+.+++|+.... .........|...|.+++|+|++. +|++++
T Consensus 168 ~~~-~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~ 237 (369)
T 3zwl_B 168 KII-THEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNN--------YEYVDSIDLHEKSISDMQFSPDLT-YFITSS 237 (369)
T ss_dssp EEE-CCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTT--------TEEEEEEECCSSCEEEEEECTTSS-EEEEEE
T ss_pred ecc-CCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCC--------cEeEEEEecCCCceeEEEECCCCC-EEEEec
Confidence 111 2333 88999999876 6788889999999977541 122334456889999999999875 578999
Q ss_pred CCCeEEEEEccc
Q 023500 268 DDGMIKIWELAN 279 (281)
Q Consensus 268 ~Dg~v~iw~~~~ 279 (281)
.|+.|++||+..
T Consensus 238 ~d~~i~v~d~~~ 249 (369)
T 3zwl_B 238 RDTNSFLVDVST 249 (369)
T ss_dssp TTSEEEEEETTT
T ss_pred CCceEEEEECCC
Confidence 999999999865
No 114
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=1.6e-27 Score=199.68 Aligned_cols=258 Identities=21% Similarity=0.360 Sum_probs=166.8
Q ss_pred CccceeEEEEcC-CCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCC---CCEEEEecCCCcEEEEEec
Q 023500 2 HTRTVRSCAWSP-SGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS---GTLLATCGRDKSVWIWEVM 77 (281)
Q Consensus 2 h~~~i~~~~~~~-~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~---~~~l~s~~~d~~v~~w~~~ 77 (281)
|...|++++|+| ++++|++++.|+.|++||..+++. ...+. +...+.++.|+|. +.++++++.|+.|++||+.
T Consensus 98 ~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 174 (408)
T 4a11_B 98 HRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQT--ADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLK 174 (408)
T ss_dssp CSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEE--EEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESS
T ss_pred CCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCcc--ceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCC
Confidence 788999999999 778999999999999999887653 34444 7788999999884 4599999999999999997
Q ss_pred CCCeeEEeEeecCCccceeEEEecCCCC-eEEEEecCCeEEEEeCCCCCCCCce-------eeeeeeeccCCccccEEEE
Q 023500 78 PGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKVWWAEDTDSDNWH-------CVQTISESNNGHSSTIWAL 149 (281)
Q Consensus 78 ~~~~~~~~~~~~~~~~~v~~v~~~p~~~-~l~s~s~d~~v~~w~~~~~~~~~~~-------~~~~~~~~~~~h~~~v~~~ 149 (281)
.+. ....+.+|...|.+++|+|++. ++++++.|+.|++|++......... ..........+|...|.++
T Consensus 175 ~~~---~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 251 (408)
T 4a11_B 175 SGS---CSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGL 251 (408)
T ss_dssp SSC---CCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEE
T ss_pred Ccc---eeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEE
Confidence 654 3566788999999999999998 5899999999999998754311000 0001111124688999999
Q ss_pred EEccCCCEEEEeeCCCcEEEEeCCccccccCCCC------------------------------------cccceeEEee
Q 023500 150 SFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGY------------------------------------ASWRHLCTIS 193 (281)
Q Consensus 150 ~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~------------------------------------~~~~~~~~~~ 193 (281)
+|+|++.+|++++.|+.|++||+........... ...+....+
T Consensus 252 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~- 330 (408)
T 4a11_B 252 CFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITML- 330 (408)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEE-
T ss_pred EEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeee-
Confidence 9999999999999999999999875432211000 000112222
Q ss_pred cccCcceEEEEeCCCc-eeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeE
Q 023500 194 GYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMI 272 (281)
Q Consensus 194 ~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v 272 (281)
..|...|.+++|++++ ++++++.|+.+++|+........ ....+ -....+.|.....+.+++.|+.+
T Consensus 331 ~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~---------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 398 (408)
T 4a11_B 331 KGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVP---------DDDET---TTKSQLNPAFEDAWSSSDEEGGT 398 (408)
T ss_dssp CCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC---------------------------------------------
T ss_pred ccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccC---------CCCce---EeccccccccceeecccCccCce
Confidence 2367889999999975 68889999999999876532211 01111 11123444334456678889999
Q ss_pred EEEEcc
Q 023500 273 KIWELA 278 (281)
Q Consensus 273 ~iw~~~ 278 (281)
++|+..
T Consensus 399 ~~W~~~ 404 (408)
T 4a11_B 399 SAWSHP 404 (408)
T ss_dssp ------
T ss_pred eecCCc
Confidence 999864
No 115
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.5e-28 Score=220.32 Aligned_cols=216 Identities=26% Similarity=0.414 Sum_probs=169.5
Q ss_pred eeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEEeEeecCCccceeEEEecCC--CCeEEEEecCCeEEE
Q 023500 41 ATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT--MDVLFSCSYDNTIKV 118 (281)
Q Consensus 41 ~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~--~~~l~s~s~d~~v~~ 118 (281)
..+.+|.+.|++++|+|++++|++|+.||+|++|++... .......+.+|...|++++|+|+ ++++++|+.||+|++
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~-~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGE-THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 81 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETT-EEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCC-CCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence 456899999999999999999999999999999998743 34566788899999999999988 899999999999999
Q ss_pred EeCCCCCCCCceeeeeeeeccCCccccEEEEEEccC--CCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeeccc
Q 023500 119 WWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK--GDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYH 196 (281)
Q Consensus 119 w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (281)
|++.... ...... ..+|...|.+++|+|+ +..+++|+.||.|++||+...... .... ...|
T Consensus 82 wd~~~~~---~~~~~~----~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~---------~~~~-~~~~ 144 (753)
T 3jro_A 82 WKEENGR---WSQIAV----HAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT---------SPII-IDAH 144 (753)
T ss_dssp EEEETTE---EEEEEE----ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCC---------CCEE-EECC
T ss_pred EECCCCc---cccccc----ccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCc---------ceeE-eecC
Confidence 9886532 112222 2468899999999999 999999999999999998643211 0111 2246
Q ss_pred CcceEEEEeCC--------------CceeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCC--C
Q 023500 197 DRTIFSVHWSR--------------EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGE--R 260 (281)
Q Consensus 197 ~~~v~~~~~~~--------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~ 260 (281)
...+.++.|+| ...+++++.|+.+++|+..... ...........|..+|++++|+|++ .
T Consensus 145 ~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~-----~~~~~~~~~~~h~~~V~~l~~sp~~~~~ 219 (753)
T 3jro_A 145 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA-----QTYVLESTLEGHSDWVRDVAWSPTVLLR 219 (753)
T ss_dssp SSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTT-----TEEEEEEEECCCSSCEEEEEECCCCSSS
T ss_pred CCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCc-----ccceeeeeecCCCCcEEEEEeccCCCCC
Confidence 78899999998 4578999999999999876431 1122334556899999999999983 4
Q ss_pred eeEEEeCCCCeEEEEEccc
Q 023500 261 RLLASASDDGMIKIWELAN 279 (281)
Q Consensus 261 ~~~~s~~~Dg~v~iw~~~~ 279 (281)
.++++++.||.|++||+..
T Consensus 220 ~~l~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 220 SYLASVSQDRTCIIWTQDN 238 (753)
T ss_dssp EEEEEEESSSCEEEEEESS
T ss_pred CEEEEEecCCEEEEecCCC
Confidence 5788999999999999875
No 116
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=1.1e-27 Score=192.13 Aligned_cols=234 Identities=11% Similarity=0.131 Sum_probs=152.9
Q ss_pred EEEeeCCCcEEEEecCCC-ceeeeeeecCCCCC-------------------------eeEEEEcCC----CCEEEEecC
Q 023500 18 LATASFDATTCIWEDVGG-DYECVATLEGHENE-------------------------VKSVSWNAS----GTLLATCGR 67 (281)
Q Consensus 18 l~tg~~d~~i~lw~~~~~-~~~~~~~~~~h~~~-------------------------v~~v~~~~~----~~~l~s~~~ 67 (281)
++++++ ..|+||++... ++++++++..|..+ |+.++|+|+ ++.++++|.
T Consensus 57 ~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~ 135 (356)
T 2w18_A 57 IITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGN 135 (356)
T ss_dssp EEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEE
T ss_pred EEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCC
Confidence 556664 46999998664 45778888887764 456666777 667776553
Q ss_pred --------------------CCcEEEEEecCCCeeEEeEeecCCccceeEEEecC---CCCeEEEEecCCeEEEEeCCCC
Q 023500 68 --------------------DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP---TMDVLFSCSYDNTIKVWWAEDT 124 (281)
Q Consensus 68 --------------------d~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p---~~~~l~s~s~d~~v~~w~~~~~ 124 (281)
|+.|++|++.+... .+..+.+|...++.++|+| ++..|++++.|++|++||+.+.
T Consensus 136 ~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~--~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TG 213 (356)
T 2w18_A 136 IKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGG--GKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTG 213 (356)
T ss_dssp EEEEEEETTTEEEEEESSSTTCEEEEEEECTTSC--EEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTC
T ss_pred eEEEEecCCCcEEEecccCCCCcEEEEEECCCCc--eeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCC
Confidence 88888888854332 3455668888899999999 6689999999999999998765
Q ss_pred CCCCceeeeeeeeccCCccccEEEEEEccCCCEE------------EEeeCCCcEEEEeCCccccccCCCCcccceeEEe
Q 023500 125 DSDNWHCVQTISESNNGHSSTIWALSFNAKGDKL------------VSCSDDLTIKIWGADITRMQSGDGYASWRHLCTI 192 (281)
Q Consensus 125 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l------------~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 192 (281)
. ++.++.. ...+...+.+++|+|++.++ ++|+.|+++++||.+.++... .....+
T Consensus 214 k-----~l~tL~g-~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~-------v~~~~~ 280 (356)
T 2w18_A 214 Q-----LLKKMHI-DDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVG-------VMLYCL 280 (356)
T ss_dssp C-----EEEEEEC-CC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEE-------EEEECC
T ss_pred c-----EEEEEcC-CCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEE-------EEEeec
Confidence 3 4444431 11123467788999999876 668889999999987543210 000001
Q ss_pred ecccCcceEEEEeCCCceeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCee-EEEEcCCCCeeEEEeCCCCe
Q 023500 193 SGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVN-SVQWSPGERRLLASASDDGM 271 (281)
Q Consensus 193 ~~~~~~~v~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~~~s~~~Dg~ 271 (281)
...|...+.+..++ ...+++++.|+++++|+.... .......+|...+. .++|+|+++ +|++|+.|++
T Consensus 281 p~Gh~~~~lsg~~s-g~~lASgS~DgTIkIWDl~tG---------k~l~tL~gH~~~vvs~vafSPDG~-~LaSGS~D~T 349 (356)
T 2w18_A 281 PPGQAGRFLEGDVK-DHCAAAILTSGTIAIWDLLLG---------QCTALLPPVSDQHWSFVKWSGTDS-HLLAGQKDGN 349 (356)
T ss_dssp CTTCCCCEEEEEEE-TTEEEEEETTSCEEEEETTTC---------SEEEEECCC--CCCCEEEECSSSS-EEEEECTTSC
T ss_pred cCCCcceeEccccC-CCEEEEEcCCCcEEEEECCCC---------cEEEEecCCCCCeEEEEEECCCCC-EEEEEECCCc
Confidence 11232233333333 346788889999999977543 22334456766655 589999886 5789999999
Q ss_pred EEEEEcc
Q 023500 272 IKIWELA 278 (281)
Q Consensus 272 v~iw~~~ 278 (281)
|||||+.
T Consensus 350 IklWd~~ 356 (356)
T 2w18_A 350 IFVYHYS 356 (356)
T ss_dssp EEEEEEC
T ss_pred EEEecCC
Confidence 9999963
No 117
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.96 E-value=6.8e-27 Score=193.03 Aligned_cols=224 Identities=18% Similarity=0.250 Sum_probs=158.1
Q ss_pred eeeeeecCCCCCeeEEEEcCC---CCEEEEecCCCcEEEEEecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEecCC
Q 023500 38 ECVATLEGHENEVKSVSWNAS---GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN 114 (281)
Q Consensus 38 ~~~~~~~~h~~~v~~v~~~~~---~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~ 114 (281)
..+..+.+|.+.|++++|+|+ |++|++|+.|+.|++|++..... .....+.+|...|++++|+|+++++++++.|+
T Consensus 30 ~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg 108 (368)
T 3mmy_A 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ-TIPKAQQMHTGPVLDVCWSDDGSKVFTASCDK 108 (368)
T ss_dssp CCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC-EEEEEEEECSSCEEEEEECTTSSEEEEEETTS
T ss_pred ceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc-eeEEEeccccCCEEEEEECcCCCEEEEEcCCC
Confidence 356678899999999999998 69999999999999999976332 23356778999999999999999999999999
Q ss_pred eEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEE--ccCCCEEEEeeCCCcEEEEeCCccccccCCCCccc-c----
Q 023500 115 TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSF--NAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASW-R---- 187 (281)
Q Consensus 115 ~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~-~---- 187 (281)
.|++|+++... ... + .+|...|.+++| +|++.+|++++.|+.|++||+...++......... .
T Consensus 109 ~v~iwd~~~~~-----~~~-~----~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 178 (368)
T 3mmy_A 109 TAKMWDLSSNQ-----AIQ-I----AQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADV 178 (368)
T ss_dssp EEEEEETTTTE-----EEE-E----EECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEE
T ss_pred cEEEEEcCCCC-----cee-e----ccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEe
Confidence 99999887542 222 2 258889999999 88999999999999999999865432111000000 0
Q ss_pred ------------------------eeEEeecccCcceEEEEeCCC-----ceeeecCCCCcEEEEecccCCCcCCcccee
Q 023500 188 ------------------------HLCTISGYHDRTIFSVHWSRE-----GIIASGAADDSVQFFVESKDDLIDGPSYKM 238 (281)
Q Consensus 188 ------------------------~~~~~~~~~~~~v~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 238 (281)
..............++.+.+. ..+++++.|+.+++|+....... .
T Consensus 179 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~------~ 252 (368)
T 3mmy_A 179 IYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPA------K 252 (368)
T ss_dssp ETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHH------H
T ss_pred cCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcc------c
Confidence 000000001122223322211 12888999999999987543110 0
Q ss_pred eeeeccCCC------------CCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 239 LLKKEKAHD------------MDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 239 ~~~~~~~h~------------~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
.......|. .+|++++|+|++. +|++++.||.|++||+..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~s~~~dg~i~iwd~~~ 304 (368)
T 3mmy_A 253 DNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHG-TLATVGSDGRFSFWDKDA 304 (368)
T ss_dssp HSEEEECSEEC----CCCEEECCEEEEEECTTTC-CEEEEETTSCEEEEETTT
T ss_pred cceeeeeeecccccccccccccceEEEEEecCCC-EEEEEccCCeEEEEECCC
Confidence 111122333 3799999999875 678999999999999875
No 118
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=3.1e-25 Score=185.23 Aligned_cols=236 Identities=12% Similarity=0.157 Sum_probs=173.5
Q ss_pred cceeEEEEcCCCCEE-EEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEE-EecCCCcEEEEEecCCCe
Q 023500 4 RTVRSCAWSPSGKLL-ATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLA-TCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 4 ~~i~~~~~~~~~~~l-~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d~~v~~w~~~~~~~ 81 (281)
..+.+++|+|+|+++ ++++.|+.|++||..+++. +..+..+ ..+.+++|+|++++|+ +++.|+.|++||+..++.
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~--~~~~~~~-~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~ 108 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNV--IATVPAG-SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTV 108 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEE--EEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeE--EEEEECC-CCccceEECCCCCEEEEEECCCCEEEEEECCCCeE
Confidence 458999999999976 7788999999999877653 4555544 4899999999999875 566789999999976543
Q ss_pred eEEeEeecCCccceeEEEecCCCCeE-EEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEE-E
Q 023500 82 FECVSVLQGHAQDVKMVQWHPTMDVL-FSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKL-V 159 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~v~~~p~~~~l-~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~ 159 (281)
+..+..+ ..+.+++|+|+++.+ ++++.|+.|++|++.... .+..+. .+ ..+.+++|+|+++.| +
T Consensus 109 ---~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~-----~~~~~~----~~-~~~~~~~~~~dg~~l~~ 174 (391)
T 1l0q_A 109 ---AGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKA-----VINTVS----VG-RSPKGIAVTPDGTKVYV 174 (391)
T ss_dssp ---EEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE-----EEEEEE----CC-SSEEEEEECTTSSEEEE
T ss_pred ---EEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCc-----EEEEEe----cC-CCcceEEECCCCCEEEE
Confidence 3334433 468999999999976 788889999999886532 222222 22 446899999999877 6
Q ss_pred EeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecC---CCCcEEEEecccCCCcCCcc
Q 023500 160 SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGA---ADDSVQFFVESKDDLIDGPS 235 (281)
Q Consensus 160 s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~---~d~~~~~~~~~~~~~~~~~~ 235 (281)
+++.|+.|++||...... ..... +...+.++.+++++ .+++++ .++.+++|+.....
T Consensus 175 ~~~~~~~v~~~d~~~~~~-----------~~~~~--~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~------ 235 (391)
T 1l0q_A 175 ANFDSMSISVIDTVTNSV-----------IDTVK--VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK------ 235 (391)
T ss_dssp EETTTTEEEEEETTTTEE-----------EEEEE--CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE------
T ss_pred EeCCCCEEEEEECCCCeE-----------EEEEe--cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCe------
Confidence 778899999999864321 11111 34567888999877 455554 68999999765321
Q ss_pred ceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 236 YKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 236 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
.......|. .+.+++|+|+++.++++++.|+.|++||+..
T Consensus 236 ---~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 236 ---ITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp ---EEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred ---EEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence 122222343 5789999999887778999999999999864
No 119
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=5.9e-26 Score=186.65 Aligned_cols=236 Identities=10% Similarity=0.040 Sum_probs=158.8
Q ss_pred cceeEEEEcCCCCEEEEeeCCCcEEEEecCCC-------ceeeeeee-cCCCCCeeEEEEcC--CCCEEEEecCCCcEEE
Q 023500 4 RTVRSCAWSPSGKLLATASFDATTCIWEDVGG-------DYECVATL-EGHENEVKSVSWNA--SGTLLATCGRDKSVWI 73 (281)
Q Consensus 4 ~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~-------~~~~~~~~-~~h~~~v~~v~~~~--~~~~l~s~~~d~~v~~ 73 (281)
..|.++.|+|+ +++|+.|+.+++|+.... ....+..+ .+|.+.|.+++|+| +++++++++.|++|++
T Consensus 77 ~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~ 153 (343)
T 3lrv_A 77 PNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGF 153 (343)
T ss_dssp ECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEE
T ss_pred CCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEE
Confidence 45667778887 899999999999975421 11112222 36778999999999 9999999999999999
Q ss_pred EEecCCCeeEEeEee-cCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEc
Q 023500 74 WEVMPGNEFECVSVL-QGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFN 152 (281)
Q Consensus 74 w~~~~~~~~~~~~~~-~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 152 (281)
||+..+.. .... ..|...+.+++|+|++.++++|+.|+.|++||+...... ...+. .+|...|.+++|+
T Consensus 154 wd~~~~~~---~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~----~~~~~---~~h~~~v~~l~fs 223 (343)
T 3lrv_A 154 QSYEDDSQ---YIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQA----SSRFP---VDEEAKIKEVKFA 223 (343)
T ss_dssp EESSSSCE---EEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSC----CEECC---CCTTSCEEEEEEC
T ss_pred EECCCCcE---EEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCC----ccEEe---ccCCCCEEEEEEe
Confidence 99976653 3333 345567999999999999999999999999998765311 01221 1388999999999
Q ss_pred cCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcce--EEEEeCCCc-eeeecCC-CCcEEEEecccC
Q 023500 153 AKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTI--FSVHWSREG-IIASGAA-DDSVQFFVESKD 228 (281)
Q Consensus 153 ~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~-~~~~~~~-d~~~~~~~~~~~ 228 (281)
|++.+|++++ |+.|++||++....... ... +. .+...+ .+++|+|++ ++++++. |+.+++|+....
T Consensus 224 ~~g~~l~s~~-~~~v~iwd~~~~~~~~~-----~~~---~~-~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 224 DNGYWMVVEC-DQTVVCFDLRKDVGTLA-----YPT---YT-IPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp TTSSEEEEEE-SSBEEEEETTSSTTCBS-----SCC---CB-C-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred CCCCEEEEEe-CCeEEEEEcCCCCccee-----ecc---cc-cccccccceEEEECCCCCEEEEecCCCCcEEEEEEccc
Confidence 9999999999 55999999875432110 000 00 011122 468999877 4555555 999999977432
Q ss_pred CCcCCccceeeeeeccCCCCCeeEEEEcC---CCCeeEEEeCCCCeEEEEE
Q 023500 229 DLIDGPSYKMLLKKEKAHDMDVNSVQWSP---GERRLLASASDDGMIKIWE 276 (281)
Q Consensus 229 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---~~~~~~~s~~~Dg~v~iw~ 276 (281)
.. ... . .++..+.|.| +.. .+++++.||.++++-
T Consensus 294 ~~----~~~-~--------~~~~~~~~~~~~~~~~-~l~~~~~d~~~~~~~ 330 (343)
T 3lrv_A 294 TK----NWT-K--------DEESALCLQSDTADFT-DMDVVCGDGGIAAIL 330 (343)
T ss_dssp TC----SEE-E--------EEEEECCC----CCCC-EEEEEEETTEEEEEE
T ss_pred cc----ceE-e--------cCceeEecCccccccc-eeEEEecCCceEEEE
Confidence 10 111 0 3355566665 443 345566666666553
No 120
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=5.1e-25 Score=186.30 Aligned_cols=239 Identities=11% Similarity=0.052 Sum_probs=177.7
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEE-EEecCCCcEEEEEecCCC
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLL-ATCGRDKSVWIWEVMPGN 80 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~~~d~~v~~w~~~~~~ 80 (281)
|...|++++|+|+++++++++.|+.|++||..+++ .+..+..|...+.+++|+|+++++ ++++.|+.|++||+..+.
T Consensus 168 ~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~ 245 (433)
T 3bws_A 168 KLGFVETISIPEHNELWVSQMQANAVHVFDLKTLA--YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKL 245 (433)
T ss_dssp TCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC--EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTE
T ss_pred cCCceeEEEEcCCCEEEEEECCCCEEEEEECCCce--EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCc
Confidence 56789999999999999999999999999987664 356667889999999999999987 556689999999987553
Q ss_pred eeEEeEeecCCccceeEEEecCCCCeEEEEe--------cCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEc
Q 023500 81 EFECVSVLQGHAQDVKMVQWHPTMDVLFSCS--------YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFN 152 (281)
Q Consensus 81 ~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s--------~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 152 (281)
....+..+ ..+.+++|+|+++.+++++ .|+.|++|++.... ....+ .|...+.+++|+
T Consensus 246 ---~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~-----~~~~~-----~~~~~~~~~~~~ 311 (433)
T 3bws_A 246 ---EIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEK-----LIDTI-----GPPGNKRHIVSG 311 (433)
T ss_dssp ---EEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTE-----EEEEE-----EEEECEEEEEEC
T ss_pred ---EEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCc-----EEeec-----cCCCCcceEEEC
Confidence 33444443 4589999999999998888 48899999886542 22222 345678899999
Q ss_pred cCCC-EEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecCC--------------
Q 023500 153 AKGD-KLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAA-------------- 216 (281)
Q Consensus 153 ~~~~-~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~-------------- 216 (281)
|+++ .+++++.|+.+++||.+..+. ...+. +...+.++++++++ .+++++.
T Consensus 312 ~~g~~l~~~~~~~~~v~v~d~~~~~~-----------~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~ 378 (433)
T 3bws_A 312 NTENKIYVSDMCCSKIEVYDLKEKKV-----------QKSIP--VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGL 378 (433)
T ss_dssp SSTTEEEEEETTTTEEEEEETTTTEE-----------EEEEE--CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCS
T ss_pred CCCCEEEEEecCCCEEEEEECCCCcE-----------EEEec--CCCCCCeEEEcCCCCEEEEEecCCCccccccccccc
Confidence 9997 456778999999999864321 11222 45667889999877 3444443
Q ss_pred -CCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 217 -DDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 217 -d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
|+.+++|+..... ....... ...+.+++|+|+++.++++++.|+.|++|++..
T Consensus 379 ~dg~v~~~d~~~~~---------~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 379 VLGKVYVIDTTTDT---------VKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp SCCEEEEEETTTTE---------EEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred cceEEEEEECCCCc---------EEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 5689999764321 1111222 356899999999876665666799999999863
No 121
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.95 E-value=1.9e-25 Score=181.02 Aligned_cols=203 Identities=25% Similarity=0.442 Sum_probs=157.4
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCce---------------------------------------eeeee
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDY---------------------------------------ECVAT 42 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~---------------------------------------~~~~~ 42 (281)
|...|++++|+|++++||+|+.|+.|+||+..+++. ..+..
T Consensus 66 ~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~ 145 (318)
T 4ggc_A 66 PGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVAT 145 (318)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEE
T ss_pred CCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEE
Confidence 567899999999999999999999999999765431 11234
Q ss_pred ecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe-eEEeEeecCCccceeEEEecCCCCe---EEEEecCCeEEE
Q 023500 43 LEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE-FECVSVLQGHAQDVKMVQWHPTMDV---LFSCSYDNTIKV 118 (281)
Q Consensus 43 ~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~-~~~~~~~~~~~~~v~~v~~~p~~~~---l~s~s~d~~v~~ 118 (281)
+.+|...+.++.|++++++|++++.|++|++||+..++. .........|...|.++.++|.+.. +++++.+++|++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~l 225 (318)
T 4ggc_A 146 LSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRI 225 (318)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEE
T ss_pred EcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEE
Confidence 567888899999999999999999999999999976542 1223445667788999999998763 346778899999
Q ss_pred EeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEe--eCCCcEEEEeCCccccccCCCCcccceeEEeeccc
Q 023500 119 WWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC--SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYH 196 (281)
Q Consensus 119 w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~--~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (281)
|+..... ..... .+...+..+.|+|++..++++ +.|+.|++||....+ .+..+. .|
T Consensus 226 wd~~~~~-----~~~~~-----~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~-----------~~~~l~-gH 283 (318)
T 4ggc_A 226 WNVCSGA-----CLSAV-----DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA-----------KVAELK-GH 283 (318)
T ss_dssp EETTTCC-----EEEEE-----ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC-----------EEEEEC-CC
T ss_pred Eeccccc-----ccccc-----cceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCc-----------EEEEEc-CC
Confidence 9876542 11111 245678899999999877765 479999999986432 233333 48
Q ss_pred CcceEEEEeCCCc-eeeecCCCCcEEEEecc
Q 023500 197 DRTIFSVHWSREG-IIASGAADDSVQFFVES 226 (281)
Q Consensus 197 ~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~ 226 (281)
...|.+++|+|++ ++++++.|+++++|++.
T Consensus 284 ~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 284 TSRVLSLTMSPDGATVASAAADETLRLWRCF 314 (318)
T ss_dssp SSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred CCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 8999999999976 68899999999999664
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=5.2e-25 Score=186.28 Aligned_cols=240 Identities=13% Similarity=0.110 Sum_probs=179.0
Q ss_pred cceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeee---eecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCC
Q 023500 4 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVA---TLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN 80 (281)
Q Consensus 4 ~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~---~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~ 80 (281)
..+.+++|+|+++++++++.|+.|++||..+++..... .+.+|.+.|.+++|+|++.++++++.|+.|++||+....
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~ 202 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLA 202 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCce
Confidence 34668999998888999999999999998876543211 445899999999999999999999999999999987554
Q ss_pred eeEEeEeecCCccceeEEEecCCCCeEE-EEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEE
Q 023500 81 EFECVSVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV 159 (281)
Q Consensus 81 ~~~~~~~~~~~~~~v~~v~~~p~~~~l~-s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 159 (281)
.+..+..|...+.+++|+|++..++ +++.|+.|++|++.... .+..+. +...+.+++|+|+++.++
T Consensus 203 ---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~-----~~~~~~-----~~~~~~~~~~~~~g~~l~ 269 (433)
T 3bws_A 203 ---YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKL-----EIRKTD-----KIGLPRGLLLSKDGKELY 269 (433)
T ss_dssp ---EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTE-----EEEECC-----CCSEEEEEEECTTSSEEE
T ss_pred ---EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCc-----EEEEec-----CCCCceEEEEcCCCCEEE
Confidence 3455667888899999999999775 55589999999886532 222221 234589999999999998
Q ss_pred Eee--------CCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc--eeeecCCCCcEEEEecccCC
Q 023500 160 SCS--------DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGAADDSVQFFVESKDD 229 (281)
Q Consensus 160 s~~--------~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~ 229 (281)
+++ .|+.|++||....+. .... .+...+..+.|++++ ++++++.++.+++|+.....
T Consensus 270 ~~~~~~~~~~~~dg~i~~~d~~~~~~-----------~~~~--~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~ 336 (433)
T 3bws_A 270 IAQFSASNQESGGGRLGIYSMDKEKL-----------IDTI--GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKK 336 (433)
T ss_dssp EEEEESCTTCSCCEEEEEEETTTTEE-----------EEEE--EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTE
T ss_pred EEECCCCccccCCCeEEEEECCCCcE-----------Eeec--cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCc
Confidence 887 588999999864321 1111 133467788999877 45777899999999775321
Q ss_pred CcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCC--------------CCeEEEEEccc
Q 023500 230 LIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASD--------------DGMIKIWELAN 279 (281)
Q Consensus 230 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~--------------Dg~v~iw~~~~ 279 (281)
..... .+...+.+++|+|+++.+++++.. ||.|++||+..
T Consensus 337 ---------~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~ 390 (433)
T 3bws_A 337 ---------VQKSI-PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT 390 (433)
T ss_dssp ---------EEEEE-ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT
T ss_pred ---------EEEEe-cCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCC
Confidence 11111 256779999999998765544443 67999999854
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=1.3e-25 Score=180.13 Aligned_cols=201 Identities=14% Similarity=0.097 Sum_probs=138.4
Q ss_pred CccceeEEEEcCC----CCEEEEeeC--------------------CCcEEEEecCC-CceeeeeeecCCCCCeeEEEEc
Q 023500 2 HTRTVRSCAWSPS----GKLLATASF--------------------DATTCIWEDVG-GDYECVATLEGHENEVKSVSWN 56 (281)
Q Consensus 2 h~~~i~~~~~~~~----~~~l~tg~~--------------------d~~i~lw~~~~-~~~~~~~~~~~h~~~v~~v~~~ 56 (281)
|.+.|+.++|+|+ ++++++++. |+.|++|+... ++ .+..+.+|...+..++|+
T Consensus 110 ~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~--~~~s~~~~~~~v~~l~fs 187 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGG--GKENQFLMPPEETILTFA 187 (356)
T ss_dssp SEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSC--EEEEEEECCCSSCEEEEE
T ss_pred cccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCc--eeeeeccCCCceeeEEee
Confidence 4567889999999 888887664 77888888733 33 355666788888888888
Q ss_pred C---CCCEEEEecCCCcEEEEEecCCCeeEEeEeecCCc---cceeEEEecCCCCeE------------EEEecCCeEEE
Q 023500 57 A---SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHA---QDVKMVQWHPTMDVL------------FSCSYDNTIKV 118 (281)
Q Consensus 57 ~---~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~~~~~---~~v~~v~~~p~~~~l------------~s~s~d~~v~~ 118 (281)
| ++.+|++||.|++|++||+..++ ++.++.+|. ..+.+++|+|++.++ ++|+.|++|++
T Consensus 188 ~~~g~~~~LaSgS~D~TIkIWDl~TGk---~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIkl 264 (356)
T 2w18_A 188 EVQGMQEALLGTTIMNNIVIWNLKTGQ---LLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIV 264 (356)
T ss_dssp EEETSTTEEEEEETTSEEEEEETTTCC---EEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEE
T ss_pred ccCCCCceEEEecCCCcEEEEECCCCc---EEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEE
Confidence 8 66899999999999999998775 455565543 467778999999876 67889999999
Q ss_pred EeCCCCCCCCceeeeeeee-ccCCccccEEEEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccC
Q 023500 119 WWAEDTDSDNWHCVQTISE-SNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHD 197 (281)
Q Consensus 119 w~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (281)
|+..... ++..+.. ...+|...+.+.++ ++..+++++.|++|++||+..++. ..++.+.++
T Consensus 265 Wd~~tgk-----~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~-----------l~tL~gH~~ 326 (356)
T 2w18_A 265 INPKTTL-----SVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQC-----------TALLPPVSD 326 (356)
T ss_dssp EETTTTE-----EEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSE-----------EEEECCC--
T ss_pred EECCCCE-----EEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcE-----------EEEecCCCC
Confidence 9876542 2222211 12366555444444 377899999999999999875432 223333223
Q ss_pred cceEEEEeCCCc-eeeecCCCCcEEEEec
Q 023500 198 RTIFSVHWSREG-IIASGAADDSVQFFVE 225 (281)
Q Consensus 198 ~~v~~~~~~~~~-~~~~~~~d~~~~~~~~ 225 (281)
..+.+++|+|++ ++++|+.|+++++|+.
T Consensus 327 ~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 327 QHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 344568999987 6889999999999954
No 124
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.94 E-value=3.4e-26 Score=191.56 Aligned_cols=207 Identities=14% Similarity=0.085 Sum_probs=139.9
Q ss_pred CccceeEEEEcC--------CCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCC-CEEEEecCCCcEE
Q 023500 2 HTRTVRSCAWSP--------SGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATCGRDKSVW 72 (281)
Q Consensus 2 h~~~i~~~~~~~--------~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~v~ 72 (281)
|++.|++++|+| |+++||+|+.|++|+|||..++. ++..+.+|...|.+++|+|++ .+|++|+.|++|+
T Consensus 135 H~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~--~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~ 212 (393)
T 4gq1_A 135 HHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG--PILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIR 212 (393)
T ss_dssp CSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE--EEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEE
T ss_pred CCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc--eeeeecCCCCCcEEEEECCCCCceEEecCCCCEEE
Confidence 889999999998 88999999999999999986653 345666799999999999986 5799999999999
Q ss_pred EEEecCCCeeEE----------------------eEeecCCccceeEEEec-CCCCeEEEEecCCeEEEEeCCCCCCCCc
Q 023500 73 IWEVMPGNEFEC----------------------VSVLQGHAQDVKMVQWH-PTMDVLFSCSYDNTIKVWWAEDTDSDNW 129 (281)
Q Consensus 73 ~w~~~~~~~~~~----------------------~~~~~~~~~~v~~v~~~-p~~~~l~s~s~d~~v~~w~~~~~~~~~~ 129 (281)
+||+..+..... .....+|...+.++.|. |++..+++++.|+++++|++........
T Consensus 213 ~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~ 292 (393)
T 4gq1_A 213 IFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNE 292 (393)
T ss_dssp EEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC--------
T ss_pred EEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCce
Confidence 999875532110 01234677889999986 7999999999999999999865421110
Q ss_pred ee-----eeeee-----eccCCccccEEEEEEcc--CCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccC
Q 023500 130 HC-----VQTIS-----ESNNGHSSTIWALSFNA--KGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHD 197 (281)
Q Consensus 130 ~~-----~~~~~-----~~~~~h~~~v~~~~~~~--~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (281)
.. +.... .....+.. .....|+| ++.++++|+.|++|++||...+.. .... ..+.
T Consensus 293 l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~-----------~~~~-~~~~ 359 (393)
T 4gq1_A 293 ISDSTMKLGPKNLLPNVQGISLFPS-LLGACPHPRYMDYFATAHSQHGLIQLINTYEKDS-----------NSIP-IQLG 359 (393)
T ss_dssp -----------CCSCSEEEECSSCC-SSCCEECSSCTTEEEEEETTTTEEEEEETTCTTC-----------CEEE-EECS
T ss_pred EeeecCccccEEEccccccccccCc-ceeEEEccCCCCEEEEEECCCCEEEEEECCCCcE-----------EEEe-cCCC
Confidence 00 00000 00001111 22334554 334677888999999999864321 1111 2367
Q ss_pred cceEEEEeCCCceeeecCCCCcEEEE
Q 023500 198 RTIFSVHWSREGIIASGAADDSVQFF 223 (281)
Q Consensus 198 ~~v~~~~~~~~~~~~~~~~d~~~~~~ 223 (281)
.+|.+++|+|+|.+++.++++.+.+|
T Consensus 360 ~~V~svafspdG~~LA~as~~Gv~lv 385 (393)
T 4gq1_A 360 MPIVDFCWHQDGSHLAIATEGSVLLT 385 (393)
T ss_dssp SCEEEEEECTTSSEEEEEESSEEEEE
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 89999999999865555555556555
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.93 E-value=4.8e-23 Score=171.91 Aligned_cols=224 Identities=12% Similarity=0.143 Sum_probs=163.0
Q ss_pred CEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEE-EEecCCCcEEEEEecCCCeeEEeEeecCCccc
Q 023500 16 KLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLL-ATCGRDKSVWIWEVMPGNEFECVSVLQGHAQD 94 (281)
Q Consensus 16 ~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~~~d~~v~~w~~~~~~~~~~~~~~~~~~~~ 94 (281)
.++++++.|+.|++||..+++ ++..+.+| ..+.+++|+|+|++| ++++.|++|++||+..++ ....+..+. .
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~--~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~---~~~~~~~~~-~ 75 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNK--VTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNN---VIATVPAGS-S 75 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTE--EEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTE---EEEEEECSS-S
T ss_pred EEEEEcCCCCEEEEEECCCCe--EEEEeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCe---EEEEEECCC-C
Confidence 468899999999999987764 45566655 458999999999976 678899999999987554 334444444 7
Q ss_pred eeEEEecCCCCeEE-EEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEE-EEeeCCCcEEEEeC
Q 023500 95 VKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKL-VSCSDDLTIKIWGA 172 (281)
Q Consensus 95 v~~v~~~p~~~~l~-s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~d~~i~~w~~ 172 (281)
+.+++|+|+++.++ +++.++.|++|++.... .+..+. +...+.+++|+|+++.| ++++.|+.|++||.
T Consensus 76 v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~-----~~~~~~-----~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~ 145 (391)
T 1l0q_A 76 PQGVAVSPDGKQVYVTNMASSTLSVIDTTSNT-----VAGTVK-----TGKSPLGLALSPDGKKLYVTNNGDKTVSVINT 145 (391)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEETTTTE-----EEEEEE-----CSSSEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred ccceEECCCCCEEEEEECCCCEEEEEECCCCe-----EEEEEe-----CCCCcceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 99999999999775 55567999999887542 222222 23467899999999877 78888999999998
Q ss_pred CccccccCCCCcccceeEEeecccCcceEEEEeCCCc-e-eeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCe
Q 023500 173 DITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-I-IASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDV 250 (281)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 250 (281)
...+. ...+. ....+..+.|++++ . +++++.++.+++|+..... ..... .+...+
T Consensus 146 ~~~~~-----------~~~~~--~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~---------~~~~~-~~~~~~ 202 (391)
T 1l0q_A 146 VTKAV-----------INTVS--VGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNS---------VIDTV-KVEAAP 202 (391)
T ss_dssp TTTEE-----------EEEEE--CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE---------EEEEE-ECSSEE
T ss_pred CCCcE-----------EEEEe--cCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCe---------EEEEE-ecCCCc
Confidence 64321 11222 23456888999877 3 4677889999999775421 11111 245678
Q ss_pred eEEEEcCCCCeeEEEeC--CCCeEEEEEccc
Q 023500 251 NSVQWSPGERRLLASAS--DDGMIKIWELAN 279 (281)
Q Consensus 251 ~~~~~~~~~~~~~~s~~--~Dg~v~iw~~~~ 279 (281)
.+++|+|+++.+++++. .|+.|++||+..
T Consensus 203 ~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~ 233 (391)
T 1l0q_A 203 SGIAVNPEGTKAYVTNVDKYFNTVSMIDTGT 233 (391)
T ss_dssp EEEEECTTSSEEEEEEECSSCCEEEEEETTT
T ss_pred cceEECCCCCEEEEEecCcCCCcEEEEECCC
Confidence 99999999876655554 689999999864
No 126
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.93 E-value=1.7e-23 Score=177.08 Aligned_cols=208 Identities=14% Similarity=0.120 Sum_probs=147.7
Q ss_pred ccceeEEEEcCCCCEEEEeeCCCcEEEEecCC-----------Ccee---eeeeecCCCCCeeEEEEcCCCCEEE----E
Q 023500 3 TRTVRSCAWSPSGKLLATASFDATTCIWEDVG-----------GDYE---CVATLEGHENEVKSVSWNASGTLLA----T 64 (281)
Q Consensus 3 ~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~-----------~~~~---~~~~~~~h~~~v~~v~~~~~~~~l~----s 64 (281)
...++.+++++++.++++++.|+ +++|+... .... .... -.+...|.+++|+|+|++|+ +
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLL-VPMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEE-ECCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCcccc-ccCCCcccEEEEcCCCCEEEEEEec
Confidence 34588999999999999999888 88876321 0000 0111 23567899999999999999 8
Q ss_pred ecCCCcEEEEEecCC--------CeeEEeEeecCCccceeEEEecCC-CCeEEEEecCCeEEEEeCCCCCCCCceeeeee
Q 023500 65 CGRDKSVWIWEVMPG--------NEFECVSVLQGHAQDVKMVQWHPT-MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTI 135 (281)
Q Consensus 65 ~~~d~~v~~w~~~~~--------~~~~~~~~~~~~~~~v~~v~~~p~-~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~ 135 (281)
|+.|++|++||+... +.......+.+|...|.+++|+|+ +.++++++.|++|++||+.... .....
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~-----~~~~~ 188 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETV-----KVCAT 188 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSE-----EEEEE
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCc-----ceeec
Confidence 999999999998643 222235667789999999999998 7899999999999999887541 12111
Q ss_pred eeccCCccccEEEEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecC
Q 023500 136 SESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGA 215 (281)
Q Consensus 136 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 215 (281)
.+|...|.+++|+|++++|++|+.||.|++||.+. ..... ..........|...+.+++|++++.++++.
T Consensus 189 ----~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~-~~~~~-----~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~ 258 (434)
T 2oit_A 189 ----LPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTL-QEKKV-----IPCPPFYESDHPVRVLDVLWIGTYVFAIVY 258 (434)
T ss_dssp ----ECGGGCEEEEEECTTSSCEEEEETTSCEEEECTTC-CEEEE-----ECCCTTCCTTSCEEEEEEEEEETTEEEEEE
T ss_pred ----cCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccCC-ccccc-----ccCCcccCCCCceeEEEEEEecCceEEEEE
Confidence 25788999999999999999999999999999862 11100 000000000123478899999887655322
Q ss_pred --CCC------cEEEEeccc
Q 023500 216 --ADD------SVQFFVESK 227 (281)
Q Consensus 216 --~d~------~~~~~~~~~ 227 (281)
.++ .+++|+..+
T Consensus 259 ~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 259 AAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp EETTCCSSSCCEEEEEECCC
T ss_pred ccCCCccCCCCceEEEEecc
Confidence 222 378887764
No 127
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.93 E-value=3.6e-23 Score=170.85 Aligned_cols=212 Identities=17% Similarity=0.241 Sum_probs=150.0
Q ss_pred ceeEEEEcCCCCEE-EEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCC------------------------
Q 023500 5 TVRSCAWSPSGKLL-ATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG------------------------ 59 (281)
Q Consensus 5 ~i~~~~~~~~~~~l-~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~------------------------ 59 (281)
.+..+++.++++++ ++|+.|+.|+|||..+++ ++..+. |...|.+++|+++.
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~--~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~ 136 (355)
T 3vu4_A 60 HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQ--DVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDD 136 (355)
T ss_dssp CCCEEEECTTSSEEEEECSSTTEEEEEETTTTE--EEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCC
T ss_pred CeEEEEEcCCCCEEEEEECCccEEEEEECCCCc--EEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEe
Confidence 46778899988877 578888999999987764 345555 66788888887753
Q ss_pred -----------CEEEE--ecCCCcEEEEEecCCCe------------eEE-eEeecCCccceeEEEecCCCCeEEEEecC
Q 023500 60 -----------TLLAT--CGRDKSVWIWEVMPGNE------------FEC-VSVLQGHAQDVKMVQWHPTMDVLFSCSYD 113 (281)
Q Consensus 60 -----------~~l~s--~~~d~~v~~w~~~~~~~------------~~~-~~~~~~~~~~v~~v~~~p~~~~l~s~s~d 113 (281)
.+++. |+.|+.|++||+..+.. ..+ +..+.+|...|++++|+|++.+|++++.|
T Consensus 137 ~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d 216 (355)
T 3vu4_A 137 IRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQD 216 (355)
T ss_dssp EEEEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCC
Confidence 23333 67888999999875431 011 56788999999999999999999999999
Q ss_pred Ce-EEEEeCCCCCCCCceeeeeeeeccCC-ccccEEEEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCc-------
Q 023500 114 NT-IKVWWAEDTDSDNWHCVQTISESNNG-HSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYA------- 184 (281)
Q Consensus 114 ~~-v~~w~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~------- 184 (281)
++ |++|++.... ++..+. .+ |...|.+++|+|++++|++++.|++|++||+..........+.
T Consensus 217 ~~~v~iwd~~~~~-----~~~~~~---~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~ 288 (355)
T 3vu4_A 217 GTIIRVFKTEDGV-----LVREFR---RGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKY 288 (355)
T ss_dssp CSEEEEEETTTCC-----EEEEEE---CTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCC
T ss_pred CCEEEEEECCCCc-----EEEEEE---cCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccc
Confidence 98 9999887542 333332 24 8899999999999999999999999999998643211100000
Q ss_pred ---ccce-eEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEEeccc
Q 023500 185 ---SWRH-LCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESK 227 (281)
Q Consensus 185 ---~~~~-~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~ 227 (281)
.|.. ...+......+...++|++++ .+++++.|+.+++|+...
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 289 FQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp CCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEE
T ss_pred cccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEc
Confidence 0000 001111112234668899876 788888999999996643
No 128
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=4.8e-22 Score=162.57 Aligned_cols=260 Identities=12% Similarity=0.135 Sum_probs=170.3
Q ss_pred CccceeEEEEcCCCCEEEEeeCC-CcEEEEecC--CCceeeeeeecCCCCCeeEEEEcCCCCEEEEec-CCCcEEEEEec
Q 023500 2 HTRTVRSCAWSPSGKLLATASFD-ATTCIWEDV--GGDYECVATLEGHENEVKSVSWNASGTLLATCG-RDKSVWIWEVM 77 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d-~~i~lw~~~--~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~d~~v~~w~~~ 77 (281)
|...+..++|+|+|++|++++.+ +.|.+|+.. +++...+..+..+. .+..++|+|+|++|++++ .++.|.+|++.
T Consensus 36 ~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~ 114 (343)
T 1ri6_A 36 VPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLE 114 (343)
T ss_dssp CSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred cCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECC
Confidence 34567889999999988888876 899999986 55555555555444 788999999999876655 58899999996
Q ss_pred CCCeeEEeEeecCCccceeEEEecCCCCeEEEEe-cCCeEEEEeCCCCCCCCceeee--eeeeccCCccccEEEEEEccC
Q 023500 78 PGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCS-YDNTIKVWWAEDTDSDNWHCVQ--TISESNNGHSSTIWALSFNAK 154 (281)
Q Consensus 78 ~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s-~d~~v~~w~~~~~~~~~~~~~~--~~~~~~~~h~~~v~~~~~~~~ 154 (281)
.+........+..+ ..+.+++|+|+++.+++++ .++.|++|++..... ..... ... ......+..++|+|+
T Consensus 115 ~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~pd 188 (343)
T 1ri6_A 115 DGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGH--LVAQDPAEVT---TVEGAGPRHMVFHPN 188 (343)
T ss_dssp TTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSC--EEEEEEEEEE---CSTTCCEEEEEECTT
T ss_pred CCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCc--eeeecccccc---cCCCCCcceEEECCC
Confidence 33333344444433 4588999999999888777 899999999865211 11111 111 112246778999999
Q ss_pred CCEEEE-eeCCCcEEEEeCCccccccCCCCcccceeEEeecc--cCcceEEEEeCCCc-e-eeecCCCCcEEEEecccCC
Q 023500 155 GDKLVS-CSDDLTIKIWGADITRMQSGDGYASWRHLCTISGY--HDRTIFSVHWSREG-I-IASGAADDSVQFFVESKDD 229 (281)
Q Consensus 155 ~~~l~s-~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~-~-~~~~~~d~~~~~~~~~~~~ 229 (281)
+++++. +..++.+.+|+.+...-. ............. ....+..+.|++++ . +++...++.+.+|+.....
T Consensus 189 g~~l~~~~~~~~~i~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~ 264 (343)
T 1ri6_A 189 EQYAYCVNELNSSVDVWELKDPHGN----IECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDG 264 (343)
T ss_dssp SSEEEEEETTTTEEEEEESSCTTSC----CEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS
T ss_pred CCEEEEEeCCCCEEEEEEecCCCCc----EEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCC
Confidence 986654 458899999998531100 0000011111110 12345678899887 3 3466678999999775211
Q ss_pred CcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEcc
Q 023500 230 LIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 278 (281)
Q Consensus 230 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~ 278 (281)
... ........+.. +..++|+|+++.+++++..|+.|++|++.
T Consensus 265 ----~~~-~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 265 ----SVL-SKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp ----CCE-EEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred ----Cce-EEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 011 11222223333 88999999988777667689999999654
No 129
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.92 E-value=1.3e-21 Score=160.89 Aligned_cols=257 Identities=10% Similarity=0.106 Sum_probs=169.5
Q ss_pred cceeEEEEcCCCCEEEEeeC--CCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEec-CCCcEEEEEecCCC
Q 023500 4 RTVRSCAWSPSGKLLATASF--DATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCG-RDKSVWIWEVMPGN 80 (281)
Q Consensus 4 ~~i~~~~~~~~~~~l~tg~~--d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~d~~v~~w~~~~~~ 80 (281)
.....++|+|+|++++++.. ++.|.+|+..++....+..+..+...+..++|+|+|++|++++ .+++|.+|++....
T Consensus 40 ~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g 119 (347)
T 3hfq_A 40 QNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADG 119 (347)
T ss_dssp SCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTS
T ss_pred CCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCC
Confidence 44667999999995544432 6899999987766555666566778889999999999888777 78999999996443
Q ss_pred eeEEeEeecC---------CccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEE
Q 023500 81 EFECVSVLQG---------HAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSF 151 (281)
Q Consensus 81 ~~~~~~~~~~---------~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 151 (281)
....+..+.. +...+.++.|+|+++++++...++.|++|++.... .......+.. .....+..++|
T Consensus 120 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g--~~~~~~~~~~---~~g~~p~~~~~ 194 (347)
T 3hfq_A 120 ALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAG--QLSEQSVLTM---EAGFGPRHLVF 194 (347)
T ss_dssp CEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTS--CEEEEEEEEC---CTTCCEEEEEE
T ss_pred CeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCC--cEEEeeeEEc---CCCCCCceEEE
Confidence 3333333221 12347889999999977777778899999987321 1111111111 11235678999
Q ss_pred ccCCCEEEE-eeCCCcEEEEeCCccccccCCCCcccceeEEeeccc-----CcceEEEEeCCCce-e-eecCCCCcEEEE
Q 023500 152 NAKGDKLVS-CSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYH-----DRTIFSVHWSREGI-I-ASGAADDSVQFF 223 (281)
Q Consensus 152 ~~~~~~l~s-~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~-~-~~~~~d~~~~~~ 223 (281)
+|++++|+. +..++.+.+|+.+...- .+.......... ...+..+.++|+|. + ++...++.+.+|
T Consensus 195 spdg~~l~v~~~~~~~v~v~~~~~~~g-------~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~ 267 (347)
T 3hfq_A 195 SPDGQYAFLAGELSSQIASLKYDTQTG-------AFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVF 267 (347)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEETTTT-------EEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEE
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCCCC-------ceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEE
Confidence 999996555 56788999998753100 001111111111 13477899999884 3 555668899999
Q ss_pred ecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEcc
Q 023500 224 VESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 278 (281)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~ 278 (281)
+..... . .........+...+..++|+|+++.+++++..++.|.+|++.
T Consensus 268 ~~~~~g-----~-~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 268 AVTADG-----H-LTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp EECGGG-----C-EEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EECCCC-----c-EEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 775321 1 122233344556688999999998777666777999999654
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.91 E-value=8.7e-22 Score=165.90 Aligned_cols=217 Identities=17% Similarity=0.206 Sum_probs=158.3
Q ss_pred CccceeEEEEcCCCCEEEEeeCCC---cEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEE-EecCCCc--EEEEE
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDA---TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLA-TCGRDKS--VWIWE 75 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~---~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d~~--v~~w~ 75 (281)
|...|.+++|+|+|++||+++.|+ .|.+||..+++.. .+..|.+.+.+++|+|+|++|+ +++.|+. |++||
T Consensus 177 ~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~---~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d 253 (415)
T 2hqs_A 177 SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR---QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMD 253 (415)
T ss_dssp ESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE---EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE---EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEE
Confidence 567899999999999999999885 8999999877542 4567888999999999999877 6766654 89999
Q ss_pred ecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEec-CC--eEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEc
Q 023500 76 VMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY-DN--TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFN 152 (281)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~-d~--~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 152 (281)
+..+. ...+..|...+.+++|+|+++.|++++. ++ .|++|++.... ...+ ..|...+.+++|+
T Consensus 254 ~~~~~----~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~------~~~l----~~~~~~~~~~~~s 319 (415)
T 2hqs_A 254 LASGQ----IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA------PQRI----TWEGSQNQDADVS 319 (415)
T ss_dssp TTTCC----EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC------CEEC----CCSSSEEEEEEEC
T ss_pred CCCCC----EEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC------EEEE----ecCCCcccCeEEC
Confidence 87554 2456678888999999999998888876 45 67777765432 1111 1345678899999
Q ss_pred cCCCEEEEeeCC---CcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCce-eeecCCCC---cEEEEec
Q 023500 153 AKGDKLVSCSDD---LTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADD---SVQFFVE 225 (281)
Q Consensus 153 ~~~~~l~s~~~d---~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~---~~~~~~~ 225 (281)
|++++|+.++.+ ..|.+||.+.++.. .+.. + ..+.++.|+|++. ++.++.++ .+++|+.
T Consensus 320 pdG~~l~~~~~~~g~~~i~~~d~~~~~~~------------~l~~-~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~ 385 (415)
T 2hqs_A 320 SDGKFMVMVSSNGGQQHIAKQDLATGGVQ------------VLSS-T-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVST 385 (415)
T ss_dssp TTSSEEEEEEECSSCEEEEEEETTTCCEE------------ECCC-S-SSCEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred CCCCEEEEEECcCCceEEEEEECCCCCEE------------EecC-C-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEEC
Confidence 999999888764 58999988643221 1111 2 2678899999874 55555554 5777755
Q ss_pred ccCCCcCCccceeeeeeccCCCCCeeEEEEcCCC
Q 023500 226 SKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGE 259 (281)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 259 (281)
... .......|...|.+++|+|..
T Consensus 386 ~g~----------~~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 386 DGR----------FKARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp TSC----------CEEECCCSSSEEEEEEECCCC
T ss_pred CCC----------cEEEeeCCCCCCcCCcccccc
Confidence 321 123345788899999999964
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.90 E-value=4.6e-21 Score=161.51 Aligned_cols=223 Identities=11% Similarity=0.063 Sum_probs=155.0
Q ss_pred CCEEEEeeCC------CcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCC---cEEEEEecCCCeeEEe
Q 023500 15 GKLLATASFD------ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDK---SVWIWEVMPGNEFECV 85 (281)
Q Consensus 15 ~~~l~tg~~d------~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~---~v~~w~~~~~~~~~~~ 85 (281)
+..++.++.+ +.|++||..+.. ...+.+|...+.+++|+|+|++|++++.|+ .|++||+..++.
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~---~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~---- 215 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYN---QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV---- 215 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCS---CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE----
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCC---CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE----
Confidence 5666666654 789999986543 456677899999999999999999999875 999999976643
Q ss_pred EeecCCccceeEEEecCCCCeEE-EEecCCe--EEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEee
Q 023500 86 SVLQGHAQDVKMVQWHPTMDVLF-SCSYDNT--IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS 162 (281)
Q Consensus 86 ~~~~~~~~~v~~v~~~p~~~~l~-s~s~d~~--v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 162 (281)
..+..|...+.+++|+|+++.|+ +++.|+. |++|++.... ...+ ..|...+.+++|+|+++.|+.++
T Consensus 216 ~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~------~~~l----~~~~~~~~~~~~spdg~~l~~~s 285 (415)
T 2hqs_A 216 RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ------IRQV----TDGRSNNTEPTWFPDSQNLAFTS 285 (415)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC------EEEC----CCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC------EEeC----cCCCCcccceEECCCCCEEEEEE
Confidence 23556777899999999999777 6776664 8899876532 1222 35667899999999999888877
Q ss_pred C-CC--cEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCce-eeecCCC---CcEEEEecccCCCcCCcc
Q 023500 163 D-DL--TIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAAD---DSVQFFVESKDDLIDGPS 235 (281)
Q Consensus 163 ~-d~--~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d---~~~~~~~~~~~~~~~~~~ 235 (281)
. ++ .|.+||...+... .+ ..+...+.++.|+|++. ++.++.+ ..+.+|+.....
T Consensus 286 ~~~g~~~i~~~d~~~~~~~------------~l-~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~------ 346 (415)
T 2hqs_A 286 DQAGRPQVYKVNINGGAPQ------------RI-TWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG------ 346 (415)
T ss_dssp CTTSSCEEEEEETTSSCCE------------EC-CCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC------
T ss_pred CCCCCcEEEEEECCCCCEE------------EE-ecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC------
Confidence 5 55 4555566533211 11 12445677899999874 4444432 477888664321
Q ss_pred ceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCC---eEEEEEccc
Q 023500 236 YKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDG---MIKIWELAN 279 (281)
Q Consensus 236 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg---~v~iw~~~~ 279 (281)
. .....|. .+.+++|+|+++.+ ++++.|+ .|++||+..
T Consensus 347 ---~-~~l~~~~-~~~~~~~spdg~~l-~~~s~~~~~~~l~~~d~~g 387 (415)
T 2hqs_A 347 ---V-QVLSSTF-LDETPSLAPNGTMV-IYSSSQGMGSVLNLVSTDG 387 (415)
T ss_dssp ---E-EECCCSS-SCEEEEECTTSSEE-EEEEEETTEEEEEEEETTS
T ss_pred ---E-EEecCCC-CcCCeEEcCCCCEE-EEEEcCCCccEEEEEECCC
Confidence 1 1122333 78999999998754 4555555 799998753
No 132
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=1.6e-21 Score=165.05 Aligned_cols=163 Identities=13% Similarity=0.132 Sum_probs=124.8
Q ss_pred ccceeEEEEcCCCCEEE----EeeCCCcEEEEecCCC---------ceeeeeeecCCCCCeeEEEEcCC-CCEEEEecCC
Q 023500 3 TRTVRSCAWSPSGKLLA----TASFDATTCIWEDVGG---------DYECVATLEGHENEVKSVSWNAS-GTLLATCGRD 68 (281)
Q Consensus 3 ~~~i~~~~~~~~~~~l~----tg~~d~~i~lw~~~~~---------~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~~~d 68 (281)
...|++++|+|+|++|| +|+.|+.|+|||..+. .......+.+|...|.+++|+|+ +.+|++++.|
T Consensus 92 ~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~D 171 (434)
T 2oit_A 92 KFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLAD 171 (434)
T ss_dssp SSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETT
T ss_pred CCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECC
Confidence 34699999999999999 8999999999997432 11124566789999999999997 8899999999
Q ss_pred CcEEEEEecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeec---cCCcccc
Q 023500 69 KSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISES---NNGHSST 145 (281)
Q Consensus 69 ~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~---~~~h~~~ 145 (281)
++|++||+.... ......+|...|++++|+|++++|++|+.|++|++|+.+.. ....+... ...|...
T Consensus 172 g~v~iwD~~~~~---~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~------~~~~~~~~~~~~~~~~~~ 242 (434)
T 2oit_A 172 GSIAVLQVTETV---KVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQ------EKKVIPCPPFYESDHPVR 242 (434)
T ss_dssp SCEEEEEESSSE---EEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTTCC------EEEEECCCTTCCTTSCEE
T ss_pred CeEEEEEcCCCc---ceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccCCc------ccccccCCcccCCCCcee
Confidence 999999997652 23445678889999999999999999999999999987621 11111111 1134558
Q ss_pred EEEEEEccCCCEEEEe-eCCC------cEEEEeCCc
Q 023500 146 IWALSFNAKGDKLVSC-SDDL------TIKIWGADI 174 (281)
Q Consensus 146 v~~~~~~~~~~~l~s~-~~d~------~i~~w~~~~ 174 (281)
|.+++|++++.++++. ..|| .+++|++..
T Consensus 243 v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 243 VLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp EEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred EEEEEEecCceEEEEEccCCCccCCCCceEEEEecc
Confidence 9999999988766543 3343 388998764
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=2.9e-21 Score=154.36 Aligned_cols=237 Identities=14% Similarity=0.100 Sum_probs=159.1
Q ss_pred CccceeEEEEcCCCCEEEEeeCCCcEEEEecCC-CceeeeeeecCC-CCCeeEEEEcCCCCEEEEec--CCCcEEEEEec
Q 023500 2 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVG-GDYECVATLEGH-ENEVKSVSWNASGTLLATCG--RDKSVWIWEVM 77 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~-~~~~~~~~~~~h-~~~v~~v~~~~~~~~l~s~~--~d~~v~~w~~~ 77 (281)
|...|.+++|+|+|++|++++ ++.|.+||..+ ++.. ....+| ...+.+++|+|+|++|++++ .++...+|.+.
T Consensus 40 ~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~--~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~ 116 (297)
T 2ojh_A 40 TPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPE--KVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLP 116 (297)
T ss_dssp ESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCE--ECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEE
T ss_pred CCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCce--EeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEE
Confidence 457799999999999999887 78999999877 6532 333444 47889999999999999988 44567777764
Q ss_pred CCCeeEEeEeecCCccceeEEEecCCCCeEE-EEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCC
Q 023500 78 PGNEFECVSVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD 156 (281)
Q Consensus 78 ~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~-s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 156 (281)
..... ...+..+. .+..++|+|+++.++ +++.|+.+++|+++.... ....+ ..|...+.+++|+|+++
T Consensus 117 ~~~~~--~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~----~~~~~----~~~~~~~~~~~~s~dg~ 185 (297)
T 2ojh_A 117 STGGT--PRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG----VETRL----THGEGRNDGPDYSPDGR 185 (297)
T ss_dssp TTCCC--CEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC----CEEEC----CCSSSCEEEEEECTTSS
T ss_pred CCCCc--eEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCC----cceEc----ccCCCccccceECCCCC
Confidence 32211 23333333 488899999999776 788999999998643211 11111 24567789999999999
Q ss_pred EEEEee-CCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCce-eeecCCC-----------CcEEEE
Q 023500 157 KLVSCS-DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAAD-----------DSVQFF 223 (281)
Q Consensus 157 ~l~s~~-~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d-----------~~~~~~ 223 (281)
.|+.++ .++.+++|+.+.... ....+. .+...+..+.|+|++. ++.++.+ ..+.+|
T Consensus 186 ~l~~~~~~~~~~~i~~~~~~~~----------~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~ 254 (297)
T 2ojh_A 186 WIYFNSSRTGQMQIWRVRVDGS----------SVERIT-DSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLM 254 (297)
T ss_dssp EEEEEECTTSSCEEEEEETTSS----------CEEECC-CCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEE
T ss_pred EEEEEecCCCCccEEEECCCCC----------CcEEEe-cCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEE
Confidence 877665 589999997652210 111111 2345677889999874 4444443 457777
Q ss_pred ecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCC
Q 023500 224 VESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDG 270 (281)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg 270 (281)
+..... . ..+.....|...+..++|+|+++.+++++..++
T Consensus 255 d~~~~~-----~--~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 294 (297)
T 2ojh_A 255 DMDGGN-----V--ETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFPV 294 (297)
T ss_dssp ETTSCS-----C--EEEEEEEESTTTSCSCCBCTTSSEEEEEEECCC
T ss_pred ecCCCC-----c--eeeeccCCCCcccccceECCCCCEEEEEEeccC
Confidence 654321 1 112223357778999999999886655554443
No 134
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.89 E-value=2e-20 Score=152.87 Aligned_cols=241 Identities=11% Similarity=0.114 Sum_probs=158.8
Q ss_pred EEEEeeCCCcEEEEecC-CCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCC-CcEEEEEecC-CCeeEEeEeecCCcc
Q 023500 17 LLATASFDATTCIWEDV-GGDYECVATLEGHENEVKSVSWNASGTLLATCGRD-KSVWIWEVMP-GNEFECVSVLQGHAQ 93 (281)
Q Consensus 17 ~l~tg~~d~~i~lw~~~-~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d-~~v~~w~~~~-~~~~~~~~~~~~~~~ 93 (281)
++++++.|+.|.+|+.. ++....+..+ .|...+.+++|+|+|++|++++.+ +.|.+|++.. ......+..+..+.
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~- 84 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG- 84 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-
Confidence 45566889999999974 3333334443 477889999999999988888776 9999999972 22233344444444
Q ss_pred ceeEEEecCCCCeEEEEec-CCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEee-CCCcEEEEe
Q 023500 94 DVKMVQWHPTMDVLFSCSY-DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS-DDLTIKIWG 171 (281)
Q Consensus 94 ~v~~v~~~p~~~~l~s~s~-d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~d~~i~~w~ 171 (281)
.+..++|+|+++.+++++. ++.|.+|++.... .......+. . ...+.+++|+|+++++++++ .++.|.+||
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~--~~~~~~~~~----~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d 157 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGL--PVGVVDVVE----G-LDGCHSANISPDNRTLWVPALKQDRICLFT 157 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTE--EEEEEEEEC----C-CTTBCCCEECTTSSEEEEEEGGGTEEEEEE
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCc--ccccccccc----C-CCCceEEEECCCCCEEEEecCCCCEEEEEE
Confidence 6899999999998766665 8899999885211 111122221 2 23478899999999887776 899999999
Q ss_pred CCc-cccccCCCCcccceeE--EeecccCcceEEEEeCCCce--eeecCCCCcEEEEecccCCCcCCccc-eeeee-ecc
Q 023500 172 ADI-TRMQSGDGYASWRHLC--TISGYHDRTIFSVHWSREGI--IASGAADDSVQFFVESKDDLIDGPSY-KMLLK-KEK 244 (281)
Q Consensus 172 ~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~~~~~~-~~~~~-~~~ 244 (281)
+.. +.. .... .........+..+.|+|++. ++++..++.+.+|+..... +... ..... ...
T Consensus 158 ~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~---g~~~~~~~~~~~~~ 225 (343)
T 1ri6_A 158 VSDDGHL---------VAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPH---GNIECVQTLDMMPE 225 (343)
T ss_dssp ECTTSCE---------EEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTT---SCCEEEEEEECSCT
T ss_pred ecCCCce---------eeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCC---CcEEEEeeccccCc
Confidence 763 211 1111 11111234677889999873 4455578899999774311 1110 11111 111
Q ss_pred C--CCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEcc
Q 023500 245 A--HDMDVNSVQWSPGERRLLASASDDGMIKIWELA 278 (281)
Q Consensus 245 ~--h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~ 278 (281)
. ....+..++|+|+++.+++++..|+.|++|++.
T Consensus 226 ~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 226 NFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp TCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred cccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 1 134567899999998877788889999999986
No 135
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.89 E-value=2.5e-20 Score=151.95 Aligned_cols=253 Identities=12% Similarity=0.042 Sum_probs=161.7
Q ss_pred cceeEEEEcCCCCEEEEeeC-CCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCC---cEEEEEecCC
Q 023500 4 RTVRSCAWSPSGKLLATASF-DATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDK---SVWIWEVMPG 79 (281)
Q Consensus 4 ~~i~~~~~~~~~~~l~tg~~-d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~---~v~~w~~~~~ 79 (281)
..+ .++|+|+|+++++++. ++.|.+||..+++. ....+..+..+..+++|+|+|++|+++..++ .|.+||+..+
T Consensus 41 ~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~ 118 (331)
T 3u4y_A 41 DFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPP-KVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKN 118 (331)
T ss_dssp CEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSC-EEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTT
T ss_pred Ccc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCce-eEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCC
Confidence 445 8999999996655554 88999999877653 1445555666666699999999998665553 8999998755
Q ss_pred CeeEEeEeecCCccceeEEEecCCCCeEE-EEecCCe-EEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCE
Q 023500 80 NEFECVSVLQGHAQDVKMVQWHPTMDVLF-SCSYDNT-IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDK 157 (281)
Q Consensus 80 ~~~~~~~~~~~~~~~v~~v~~~p~~~~l~-s~s~d~~-v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 157 (281)
+. +..+.. .....+++|+|+++.++ +...++. +.+|++....... ... .... .....+..++|+|++++
T Consensus 119 ~~---~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~--~~~-~~~~--~~~~~~~~~~~spdg~~ 189 (331)
T 3u4y_A 119 KF---ISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLF--DTG-QEFI--SGGTRPFNITFTPDGNF 189 (331)
T ss_dssp EE---EEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEE--EEE-EEEE--CSSSSEEEEEECTTSSE
T ss_pred Ce---EEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEe--ecC-Cccc--cCCCCccceEECCCCCE
Confidence 42 333333 33468999999998555 4455588 9999887432110 000 1111 12344789999999985
Q ss_pred E-EEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCce--eeecCCCCcEEEEecccCCCcCCc
Q 023500 158 L-VSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI--IASGAADDSVQFFVESKDDLIDGP 234 (281)
Q Consensus 158 l-~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~~~~ 234 (281)
+ +++..++.|.+||.+..+. ......+. ....+..+.++|++. +++...++.+.+|+........
T Consensus 190 l~v~~~~~~~v~v~d~~~~~~--------~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~-- 257 (331)
T 3u4y_A 190 AFVANLIGNSIGILETQNPEN--------ITLLNAVG--TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSF-- 257 (331)
T ss_dssp EEEEETTTTEEEEEECSSTTS--------CEEEEEEE--CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEE--
T ss_pred EEEEeCCCCeEEEEECCCCcc--------cceeeecc--CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceee--
Confidence 5 5555789999999864322 01122222 234566788998875 4444557788888765422100
Q ss_pred cceeeeeeccCCCCC---eeEEEEcCCCCeeEEEeCCCCeEEEEEcccC
Q 023500 235 SYKMLLKKEKAHDMD---VNSVQWSPGERRLLASASDDGMIKIWELANT 280 (281)
Q Consensus 235 ~~~~~~~~~~~h~~~---v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~~ 280 (281)
..........+..+ ...++|+|+++.++++++.++.|++||+..+
T Consensus 258 -~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 258 -VKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGK 305 (331)
T ss_dssp -EEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred -ecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence 00001000011122 2558999999888788888899999998754
No 136
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.89 E-value=4.9e-21 Score=172.56 Aligned_cols=245 Identities=10% Similarity=0.090 Sum_probs=163.9
Q ss_pred cceeEEEEcCCCCEEEEeeC-CC-----cEEEEecCCCceeeeeeecCCC----------------------CCeeEEEE
Q 023500 4 RTVRSCAWSPSGKLLATASF-DA-----TTCIWEDVGGDYECVATLEGHE----------------------NEVKSVSW 55 (281)
Q Consensus 4 ~~i~~~~~~~~~~~l~tg~~-d~-----~i~lw~~~~~~~~~~~~~~~h~----------------------~~v~~v~~ 55 (281)
..|..++|+|||++|++++. |+ .|.+||..+++...+....++. ..+.+++|
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 116 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQW 116 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEE
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEE
Confidence 56889999999999999998 88 8999998877644333322222 33789999
Q ss_pred cCCCCEEEEecCCCcEEEEEecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeee
Q 023500 56 NASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTI 135 (281)
Q Consensus 56 ~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~ 135 (281)
+|||++|++++. ++|++||+..+... ....+..|...+..++|+|+++.|+.++ ++.|++|++.... . ..+
T Consensus 117 SpDg~~l~~~~~-~~i~~~d~~~~~~~-~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~-----~-~~~ 187 (741)
T 2ecf_A 117 SPDAQRLLFPLG-GELYLYDLKQEGKA-AVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGR-----Q-MQL 187 (741)
T ss_dssp CTTSSEEEEEET-TEEEEEESSSCSTT-SCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTE-----E-EEC
T ss_pred CCCCCEEEEEeC-CcEEEEECCCCCcc-eEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCC-----E-EEe
Confidence 999999999887 99999999765100 1234566777899999999999999887 5699999886532 1 111
Q ss_pred eeccCCccc----------------cEEEEEEccCCCEEEEeeCCC---------------------------------c
Q 023500 136 SESNNGHSS----------------TIWALSFNAKGDKLVSCSDDL---------------------------------T 166 (281)
Q Consensus 136 ~~~~~~h~~----------------~v~~~~~~~~~~~l~s~~~d~---------------------------------~ 166 (281)
.. .+.. .+..+.|+||++.|+.++.|+ .
T Consensus 188 ~~---~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~ 264 (741)
T 2ecf_A 188 TA---DGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVK 264 (741)
T ss_dssp CC---CCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEE
T ss_pred cc---CCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeE
Confidence 11 1111 146799999999999987665 6
Q ss_pred EEEEeCCc-cccccCCCCcccceeEEeecccCcceEEEEeCCCce-eeecC-----CCCcEEEEecccCCCcCCccceee
Q 023500 167 IKIWGADI-TRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGA-----ADDSVQFFVESKDDLIDGPSYKML 239 (281)
Q Consensus 167 i~~w~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~-----~d~~~~~~~~~~~~~~~~~~~~~~ 239 (281)
|.+||.+. ++.. .+ .....+...+..+.| |+|. ++.++ .+..+++|+..... . ...
T Consensus 265 l~~~d~~~~~~~~---------~~-~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~-----~-~~~ 327 (741)
T 2ecf_A 265 LGVISPAEQAQTQ---------WI-DLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ-----Q-RVL 327 (741)
T ss_dssp EEEECSSTTCCCE---------EE-CCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCC-----E-EEE
T ss_pred EEEEECCCCCceE---------Ee-cCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCc-----e-EEE
Confidence 77777654 3211 00 000124567788999 9874 33222 34567777654321 1 111
Q ss_pred eeec-cCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEcc
Q 023500 240 LKKE-KAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 278 (281)
Q Consensus 240 ~~~~-~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~ 278 (281)
.... ...-..+..++|+|+++ ++++++.||.++||.+.
T Consensus 328 ~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 328 AHETSPTWVPLHNSLRFLDDGS-ILWSSERTGFQHLYRID 366 (741)
T ss_dssp EEEECSSCCCCCSCCEECTTSC-EEEEECTTSSCEEEEEC
T ss_pred EEcCCCCcCCcCCceEECCCCe-EEEEecCCCccEEEEEc
Confidence 1111 11111456889999987 77888899988888764
No 137
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.87 E-value=1.9e-19 Score=156.32 Aligned_cols=255 Identities=15% Similarity=0.122 Sum_probs=165.4
Q ss_pred eeEEEEcCCCCEEEEeeCCCcEEEEec--CCCceeeeeeecCCCCCeeEEEEcC----CCCEEEEec-CCCcEEEEEecC
Q 023500 6 VRSCAWSPSGKLLATASFDATTCIWED--VGGDYECVATLEGHENEVKSVSWNA----SGTLLATCG-RDKSVWIWEVMP 78 (281)
Q Consensus 6 i~~~~~~~~~~~l~tg~~d~~i~lw~~--~~~~~~~~~~~~~h~~~v~~v~~~~----~~~~l~s~~-~d~~v~~w~~~~ 78 (281)
+..++|+|+|++|++++.|+.|.+||. .+. .++..+. +......++|+| +|+++++++ .+++|.+||...
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~--~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t 257 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEP--TKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGET 257 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSC--EEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTT
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCC--cEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccc
Confidence 778999999999999999999999998 554 3466666 445678999999 999999888 489999999754
Q ss_pred CCeeEEeEe----------------------------------------------------ecCCccceeEEEecCCCCe
Q 023500 79 GNEFECVSV----------------------------------------------------LQGHAQDVKMVQWHPTMDV 106 (281)
Q Consensus 79 ~~~~~~~~~----------------------------------------------------~~~~~~~v~~v~~~p~~~~ 106 (281)
.+....+.. ...+...+..+.|+|++++
T Consensus 258 ~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~ 337 (543)
T 1nir_A 258 LEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRY 337 (543)
T ss_dssp CCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCE
T ss_pred cccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCE
Confidence 332111100 0001122345678888886
Q ss_pred EEEE-ecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccC-CCEEEEee-CCCcEEEEeCCccccccCCCC
Q 023500 107 LFSC-SYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK-GDKLVSCS-DDLTIKIWGADITRMQSGDGY 183 (281)
Q Consensus 107 l~s~-s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~-~d~~i~~w~~~~~~~~~~~~~ 183 (281)
++++ ..+++|.+||..+. +++..+......|+.....+ ++|+ +..++++. .|++|++||++..... .
T Consensus 338 l~va~~~~~~v~v~D~~tg-----~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~----~ 407 (543)
T 1nir_A 338 FMTAANNSNKVAVIDSKDR-----RLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHP----Q 407 (543)
T ss_dssp EEEEEGGGTEEEEEETTTT-----EEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCT----T
T ss_pred EEEEecCCCeEEEEECCCC-----eEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCc----h
Confidence 5544 45778888877643 23333332223365444333 4676 56677775 6899999998742110 0
Q ss_pred cccceeEEeecccCcceEEEEeCCCce-eeecC-------CCCcEEEEecccCCCcCCccceeeeee-----ccCCCCCe
Q 023500 184 ASWRHLCTISGYHDRTIFSVHWSREGI-IASGA-------ADDSVQFFVESKDDLIDGPSYKMLLKK-----EKAHDMDV 250 (281)
Q Consensus 184 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~-------~d~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~h~~~v 250 (281)
..|+.+..+.. +...+..+.++|++. +.+.+ .++++.+|+....... ...+.. ...+...+
T Consensus 408 ~~~~~v~~l~~-~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~-----~~~~~v~~~~~~~~~~~~~ 481 (543)
T 1nir_A 408 YAWKKVAELQG-QGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK-----YQVLPIAEWADLGEGAKRV 481 (543)
T ss_dssp TBTSEEEEEEC-SCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC-----CEEECHHHHHCCCSSCCEE
T ss_pred hcCeEEEEEEc-CCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC-----eEEeechhhcccCCCCCce
Confidence 11344444442 455667788999874 44443 1679999988653321 111111 13456789
Q ss_pred eEEEEcCCCCeeEEEe----CCCCeEEEEEccc
Q 023500 251 NSVQWSPGERRLLASA----SDDGMIKIWELAN 279 (281)
Q Consensus 251 ~~~~~~~~~~~~~~s~----~~Dg~v~iw~~~~ 279 (281)
..++|+|+|+.++++. +.|+.|.|||...
T Consensus 482 ~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t 514 (543)
T 1nir_A 482 VQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKT 514 (543)
T ss_dssp EEEEECSSSSEEEEEEECCTTSCCEEEEEETTT
T ss_pred EeccCCCCCCEEEEEeecCCCCCCeEEEEECCC
Confidence 9999999998877663 2579999999764
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.87 E-value=8.3e-20 Score=164.55 Aligned_cols=241 Identities=11% Similarity=0.143 Sum_probs=166.0
Q ss_pred ceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEE
Q 023500 5 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFEC 84 (281)
Q Consensus 5 ~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~ 84 (281)
.|..++|+|||++|++++. +.|.+||..++.......+..|...+.+++|+|||++|+.++. +.|++||+..+..
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~--- 184 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQ--- 184 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEE---
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCE---
Confidence 3788999999999999886 8999999877610013355678888999999999999998875 6899999875432
Q ss_pred eEeecCCcc----------------ceeEEEecCCCCeEEEEecCC---------------------------------e
Q 023500 85 VSVLQGHAQ----------------DVKMVQWHPTMDVLFSCSYDN---------------------------------T 115 (281)
Q Consensus 85 ~~~~~~~~~----------------~v~~v~~~p~~~~l~s~s~d~---------------------------------~ 115 (281)
......+.. .+..+.|+|+++.|++++.|+ .
T Consensus 185 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~ 264 (741)
T 2ecf_A 185 MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVK 264 (741)
T ss_dssp EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEE
T ss_pred EEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeE
Confidence 222222222 147899999999999988776 7
Q ss_pred EEEEeCCC-CCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeC-----CCcEEEEeCCccccccCCCCccccee
Q 023500 116 IKVWWAED-TDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-----DLTIKIWGADITRMQSGDGYASWRHL 189 (281)
Q Consensus 116 v~~w~~~~-~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-----d~~i~~w~~~~~~~~~~~~~~~~~~~ 189 (281)
|++|++.. ... ..+.. ...|...+..++| |+++.|+..+. +..|.+||...+... ..
T Consensus 265 l~~~d~~~~~~~------~~~~~-~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~---------~~ 327 (741)
T 2ecf_A 265 LGVISPAEQAQT------QWIDL-GKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQR---------VL 327 (741)
T ss_dssp EEEECSSTTCCC------EEECC-CSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEE---------EE
T ss_pred EEEEECCCCCce------EEecC-CCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceE---------EE
Confidence 78887754 321 11111 1246778999999 99998887653 567888987643211 11
Q ss_pred EEeecccCc---ceEEEEeCCCc-eeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEE-EEcCCCCeeEE
Q 023500 190 CTISGYHDR---TIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSV-QWSPGERRLLA 264 (281)
Q Consensus 190 ~~~~~~~~~---~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~-~~~~~~~~~~~ 264 (281)
....... .+..+.|++++ +++++..++..++|..... +. ......|...|..+ .|+|+++.+++
T Consensus 328 --~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~----~~-----~~~l~~~~~~v~~~~~~s~dg~~l~~ 396 (741)
T 2ecf_A 328 --AHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSK----GK-----AAALTHGNWSVDELLAVDEKAGLAYF 396 (741)
T ss_dssp --EEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSS----SC-----EEESCCSSSCEEEEEEEETTTTEEEE
T ss_pred --EEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCC----CC-----eeeeeecceEEEeEeEEeCCCCEEEE
Confidence 1111111 33467888877 5666778888888866421 11 12234566778887 59999987777
Q ss_pred EeCCCC--eEEEEEcc
Q 023500 265 SASDDG--MIKIWELA 278 (281)
Q Consensus 265 s~~~Dg--~v~iw~~~ 278 (281)
+++.|+ .++||++.
T Consensus 397 ~~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 397 RAGIESARESQIYAVP 412 (741)
T ss_dssp EECSSCTTCBEEEEEE
T ss_pred EEeCCCCceEEEEEEE
Confidence 787777 89999875
No 139
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.86 E-value=3.6e-18 Score=141.02 Aligned_cols=258 Identities=14% Similarity=0.131 Sum_probs=160.4
Q ss_pred cceeEEEEcCCCCEEEEeeCC----CcEEEEecCC--CceeeeeeecCCCCCeeEEEEcCCCCEEEEec-CCCcEEEEEe
Q 023500 4 RTVRSCAWSPSGKLLATASFD----ATTCIWEDVG--GDYECVATLEGHENEVKSVSWNASGTLLATCG-RDKSVWIWEV 76 (281)
Q Consensus 4 ~~i~~~~~~~~~~~l~tg~~d----~~i~lw~~~~--~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~d~~v~~w~~ 76 (281)
.....++|+|+|++|++++.+ +.+.+|+... +....+.....+......+++ ++++|++++ .+++|.+|++
T Consensus 50 ~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~ 127 (361)
T 3scy_A 50 ANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPI 127 (361)
T ss_dssp SCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEB
T ss_pred CCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEe
Confidence 455678999999999888876 7999998654 454555555555566677777 788776665 6889999999
Q ss_pred cCCCeeEEe---Eeec--------CCccceeEEEecCCCCeEEEEe-cCCeEEEEeCCCCCCC---C-ceeeeeeeeccC
Q 023500 77 MPGNEFECV---SVLQ--------GHAQDVKMVQWHPTMDVLFSCS-YDNTIKVWWAEDTDSD---N-WHCVQTISESNN 140 (281)
Q Consensus 77 ~~~~~~~~~---~~~~--------~~~~~v~~v~~~p~~~~l~s~s-~d~~v~~w~~~~~~~~---~-~~~~~~~~~~~~ 140 (281)
......... .... .+...+.+++|+|+++.+++++ .++.|++|+++..... . ............
T Consensus 128 ~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~ 207 (361)
T 3scy_A 128 GQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKV 207 (361)
T ss_dssp CTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEEC
T ss_pred CCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceec
Confidence 644321111 1111 1223457899999999665544 5889999988653210 0 000000000011
Q ss_pred CccccEEEEEEccCCCEEEEee-CCCcEEEEeCCccccccCCCCcccceeEEeec--ccCcceEEEEeCCCce-e-eecC
Q 023500 141 GHSSTIWALSFNAKGDKLVSCS-DDLTIKIWGADITRMQSGDGYASWRHLCTISG--YHDRTIFSVHWSREGI-I-ASGA 215 (281)
Q Consensus 141 ~h~~~v~~~~~~~~~~~l~s~~-~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~-~-~~~~ 215 (281)
.+...+..++|+|+++++++++ .++.|.+|+.+.+.. +....... .+......+.|+|++. + ++..
T Consensus 208 ~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~---------~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~ 278 (361)
T 3scy_A 208 APGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGML---------DEIQTVAADTVNAQGSGDIHLSPDGKYLYASNR 278 (361)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEE---------EEEEEEESCSSCCCCEEEEEECTTSSEEEEEEC
T ss_pred CCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCce---------EEeEEEecCCCCCCCcccEEECCCCCEEEEECC
Confidence 2234567899999999777666 689999998763221 11111111 1123456889999884 4 3333
Q ss_pred C-CCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEcc
Q 023500 216 A-DDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 278 (281)
Q Consensus 216 ~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~ 278 (281)
. ++.+.+|+.... .+. . ........ ...+..++|+|+++.+++++..++.|.+|++.
T Consensus 279 ~~~~~i~v~~~~~~---~g~-~-~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 279 LKADGVAIFKVDET---NGT-L-TKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp SSSCEEEEEEECTT---TCC-E-EEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred CCCCEEEEEEEcCC---CCc-E-EEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 4 578999977421 111 1 11122222 45688999999998777677688999998764
No 140
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.86 E-value=2.1e-20 Score=167.96 Aligned_cols=247 Identities=11% Similarity=0.108 Sum_probs=156.7
Q ss_pred ceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCC---CeeEEEEcCCCCEEEEecCC---------CcEE
Q 023500 5 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHEN---EVKSVSWNASGTLLATCGRD---------KSVW 72 (281)
Q Consensus 5 ~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~---~v~~v~~~~~~~~l~s~~~d---------~~v~ 72 (281)
.+..++|+|||+++++ +.|+.|++||..+++. ...+.+|.. .|.+++|||||++|++++.+ +.++
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~--~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~ 94 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTS--TVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYV 94 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCC--EEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcE--EEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEE
Confidence 3567899999998876 7899999999887753 344555654 49999999999999998765 6788
Q ss_pred EEEecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeec-cC-----Ccc---
Q 023500 73 IWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISES-NN-----GHS--- 143 (281)
Q Consensus 73 ~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~-~~-----~h~--- 143 (281)
+||+..+.. ..+....+|...+..++|+|+++.|+.++. +.|++|++..... . .+... .. ++.
T Consensus 95 ~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~-----~-~~~~~~~~~~~~~g~~~~v 166 (723)
T 1xfd_A 95 LSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQA-----I-RVVSTGKEGVIYNGLSDWL 166 (723)
T ss_dssp EEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCC-----E-EEECCCBTTTEEEEECCHH
T ss_pred EEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCce-----E-EEecCCCCCceECccccee
Confidence 999976653 223333445556889999999999999886 7999998765321 1 11110 00 000
Q ss_pred ------ccEEEEEEccCCCEEEEeeCCC----------------------------------cEEEEeCCccccccCCCC
Q 023500 144 ------STIWALSFNAKGDKLVSCSDDL----------------------------------TIKIWGADITRMQSGDGY 183 (281)
Q Consensus 144 ------~~v~~~~~~~~~~~l~s~~~d~----------------------------------~i~~w~~~~~~~~~~~~~ 183 (281)
..+.++.|+||++.|+.++.|+ .|.+||.........
T Consensus 167 ~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~--- 243 (723)
T 1xfd_A 167 YEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLE--- 243 (723)
T ss_dssp HHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEE---
T ss_pred EEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEE---
Confidence 1237899999999999887543 577777654321000
Q ss_pred cccceeEEeecccCcceEEEEeCCCceee-ecC----CCCcEEEEecccCCCcCCccceeeeeeccCCCCCe----eEEE
Q 023500 184 ASWRHLCTISGYHDRTIFSVHWSREGIIA-SGA----ADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDV----NSVQ 254 (281)
Q Consensus 184 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~----~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v----~~~~ 254 (281)
+... .....+...+..+.|+|+|.++ ... .+..+++|+.... .. ..... ..+...+ ..++
T Consensus 244 --l~~~-~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g-----~~-~~~~~--~~~~~~~~~~~~~~~ 312 (723)
T 1xfd_A 244 --MMPP-DDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG-----VC-TKKHE--DESEAWLHRQNEEPV 312 (723)
T ss_dssp --CCCC-CCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC-----CE-EEEEE--EECSSCCCCCCCCCE
T ss_pred --eeCC-ccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC-----cc-eEEEE--eccCCEEeccCCCce
Confidence 0000 0000124567889999998644 322 2346777765432 11 11111 1223333 3789
Q ss_pred EcCCCCeeEEE-eCCCC------eEEEEE
Q 023500 255 WSPGERRLLAS-ASDDG------MIKIWE 276 (281)
Q Consensus 255 ~~~~~~~~~~s-~~~Dg------~v~iw~ 276 (281)
|+|+|+.++.. +..|+ .|.+||
T Consensus 313 ~spdg~~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 313 FSKDGRKFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp ECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred EcCCCCeEEEEEecccCCCcceeEEEEEe
Confidence 99999876554 56677 456666
No 141
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.86 E-value=2.8e-19 Score=160.33 Aligned_cols=243 Identities=12% Similarity=0.158 Sum_probs=162.0
Q ss_pred cceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecC-----
Q 023500 4 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMP----- 78 (281)
Q Consensus 4 ~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~----- 78 (281)
..|.+++|+|| +.++.+ .|+.+.+||..+++. ..+..+...+.+++|+|||++|+++ .|++|++|++..
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~---~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~ 155 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKV---TYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGM 155 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEE---EEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCC
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCce---EEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccC
Confidence 56999999999 655544 359999999877643 2334567788999999999999985 679999999976
Q ss_pred CCeeEEeEeecCCccc--------------eeEEEecCCCCeEEEEe---------------------------------
Q 023500 79 GNEFECVSVLQGHAQD--------------VKMVQWHPTMDVLFSCS--------------------------------- 111 (281)
Q Consensus 79 ~~~~~~~~~~~~~~~~--------------v~~v~~~p~~~~l~s~s--------------------------------- 111 (281)
+.. ......+... +.++.|+|+++.|++++
T Consensus 156 g~~---~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~ 232 (706)
T 2z3z_A 156 SRA---IAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPS 232 (706)
T ss_dssp CCC---EESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCC
T ss_pred CCc---EEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCC
Confidence 443 2222223222 48999999999999887
Q ss_pred cCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeCCC-----cEEEEeCCccccccCCCCccc
Q 023500 112 YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDL-----TIKIWGADITRMQSGDGYASW 186 (281)
Q Consensus 112 ~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~-----~i~~w~~~~~~~~~~~~~~~~ 186 (281)
.+..|++|+++... ...+. ....|...+..++|+|+++.|++++.++ .|.+||...+...
T Consensus 233 ~~~~l~~~d~~~~~------~~~~~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~-------- 297 (706)
T 2z3z_A 233 HHVTVGIYHLATGK------TVYLQ-TGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFV-------- 297 (706)
T ss_dssp CEEEEEEEETTTTE------EEECC-CCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEE--------
T ss_pred CeeEEEEEECCCCc------eEeec-cCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCcee--------
Confidence 34678999886542 11111 1124567789999999999998877665 8999987643110
Q ss_pred ceeEEeec-ccCcceEEEEeCC--Cc-eeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeE-EEEcCCCCe
Q 023500 187 RHLCTISG-YHDRTIFSVHWSR--EG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNS-VQWSPGERR 261 (281)
Q Consensus 187 ~~~~~~~~-~~~~~v~~~~~~~--~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~ 261 (281)
+.+..... .....+..+.|+| ++ +++++..++..++|..... +. .......|...+.. ++|+|+++.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~----~~----~~~~l~~~~~~v~~~~~~spdg~~ 369 (706)
T 2z3z_A 298 RTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTT----GR----LIRQVTKGEWEVTNFAGFDPKGTR 369 (706)
T ss_dssp EEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETT----SC----EEEECCCSSSCEEEEEEECTTSSE
T ss_pred eEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECC----CC----EEEecCCCCeEEEeeeEEcCCCCE
Confidence 11111000 0011234567888 76 4566677888899976421 11 12223456667776 799999988
Q ss_pred eEEEeCCCC----eEEEEEcc
Q 023500 262 LLASASDDG----MIKIWELA 278 (281)
Q Consensus 262 ~~~s~~~Dg----~v~iw~~~ 278 (281)
++++++.++ .|..|++.
T Consensus 370 l~~~~~~~~~~~~~l~~~d~~ 390 (706)
T 2z3z_A 370 LYFESTEASPLERHFYCIDIK 390 (706)
T ss_dssp EEEEESSSCTTCBEEEEEETT
T ss_pred EEEEecCCCCceEEEEEEEcC
Confidence 777777776 56666653
No 142
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.86 E-value=2e-19 Score=143.57 Aligned_cols=224 Identities=10% Similarity=0.092 Sum_probs=151.9
Q ss_pred EeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecC-CCeeEEeEeecCC-ccceeE
Q 023500 20 TASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMP-GNEFECVSVLQGH-AQDVKM 97 (281)
Q Consensus 20 tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~-~~~~~~~~~~~~~-~~~v~~ 97 (281)
.++.|+.|.+||..+++.. .+..|...|.+++|+|+|++|++++ ++.|++||+.. +.. ......+ ...+.+
T Consensus 17 ~~~~~~~i~~~d~~~~~~~---~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~---~~~~~~~~~~~~~~ 89 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR---VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSP---EKVDTGFATICNND 89 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE---EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSC---EECCCTTCCCBCSC
T ss_pred CCCcceeEEEEeCCCCcee---eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCc---eEeccccccccccc
Confidence 4567899999998876533 3445889999999999999999987 78999999976 543 2333444 367899
Q ss_pred EEecCCCCeEEEEe--cCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEE-EeeCCCcEEEEeCCc
Q 023500 98 VQWHPTMDVLFSCS--YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIWGADI 174 (281)
Q Consensus 98 v~~~p~~~~l~s~s--~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~d~~i~~w~~~~ 174 (281)
++|+|+++.+++++ .++..++|.++..... ...+. +...+..++|+|+++.|+ ++..++.+++|+++.
T Consensus 90 ~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~----~~~~~-----~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~ 160 (297)
T 2ojh_A 90 HGISPDGALYAISDKVEFGKSAIYLLPSTGGT----PRLMT-----KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDI 160 (297)
T ss_dssp CEECTTSSEEEEEECTTTSSCEEEEEETTCCC----CEECC-----SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred eEECCCCCEEEEEEeCCCCcceEEEEECCCCc----eEEee-----cCCCccceEECCCCCEEEEEECCCCceEEEEEEC
Confidence 99999999999998 4456666655322111 11121 123478899999999777 788899999998643
Q ss_pred cccccCCCCcccceeEEeecccCcceEEEEeCCCce-ee-ecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeE
Q 023500 175 TRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IA-SGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNS 252 (281)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~-~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 252 (281)
... ....+ ..+...+.++.|+|++. ++ ++..++.+++|...... . .......|...+..
T Consensus 161 ~~~----------~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~----~----~~~~~~~~~~~~~~ 221 (297)
T 2ojh_A 161 DSG----------VETRL-THGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG----S----SVERITDSAYGDWF 221 (297)
T ss_dssp TTC----------CEEEC-CCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS----S----CEEECCCCSEEEEE
T ss_pred CCC----------cceEc-ccCCCccccceECCCCCEEEEEecCCCCccEEEECCCC----C----CcEEEecCCcccCC
Confidence 210 01111 12456788899999874 44 44458889999764211 1 11223346677899
Q ss_pred EEEcCCCCeeEEEeCCC-----------CeEEEEEccc
Q 023500 253 VQWSPGERRLLASASDD-----------GMIKIWELAN 279 (281)
Q Consensus 253 ~~~~~~~~~~~~s~~~D-----------g~v~iw~~~~ 279 (281)
++|+|+++.++ .++.| +.|++||+..
T Consensus 222 ~~~s~dg~~l~-~~~~~~~~~~~~~~~~~~l~~~d~~~ 258 (297)
T 2ojh_A 222 PHPSPSGDKVV-FVSYDADVFDHPRDLDVRVQLMDMDG 258 (297)
T ss_dssp EEECTTSSEEE-EEEEETTCCSCCSSEEEEEEEEETTS
T ss_pred eEECCCCCEEE-EEEcCCCCCcccccCceEEEEEecCC
Confidence 99999987654 44444 5699999764
No 143
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.86 E-value=6.8e-19 Score=152.89 Aligned_cols=240 Identities=12% Similarity=0.111 Sum_probs=164.8
Q ss_pred EEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeec-CCCCCeeEEEEcCCCCEEEEecCCCcEEEEEe--cCCCeeEEeE
Q 023500 10 AWSPSGKLLATASFDATTCIWEDVGGDYECVATLE-GHENEVKSVSWNASGTLLATCGRDKSVWIWEV--MPGNEFECVS 86 (281)
Q Consensus 10 ~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~--~~~~~~~~~~ 86 (281)
+|+|++.++++++.|+.|.+||..+++ ++.++. ++. +.+++|+|+|++|++++.|++|++||+ ... +.+.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~--~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~---~~~~ 216 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKK--IVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEP---TKVA 216 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCC--EEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSC---EEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCce--EEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCC---cEEE
Confidence 488999999999999999999987765 356666 443 889999999999999999999999999 443 3344
Q ss_pred eecCCccceeEEEecC----CCCeEEEEec-CCeEEEEeCCCCCCCCceeeeeeeecc------CCccc-cEEEEEEccC
Q 023500 87 VLQGHAQDVKMVQWHP----TMDVLFSCSY-DNTIKVWWAEDTDSDNWHCVQTISESN------NGHSS-TIWALSFNAK 154 (281)
Q Consensus 87 ~~~~~~~~v~~v~~~p----~~~~l~s~s~-d~~v~~w~~~~~~~~~~~~~~~~~~~~------~~h~~-~v~~~~~~~~ 154 (281)
.+. +......++|+| +++++++++. +++|.+||..... ++..+.... .-|+. .+.++.++|+
T Consensus 217 ~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~-----~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~ 290 (543)
T 1nir_A 217 EIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE-----PKQIVSTRGMTVDTQTYHPEPRVAAIIASHE 290 (543)
T ss_dssp EEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC-----EEEEEECCEECSSSCCEESCCCEEEEEECSS
T ss_pred EEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc-----cceeecccCcccCccccccCCceEEEEECCC
Confidence 454 345679999999 9999988884 8999999876532 333332100 01333 6889999997
Q ss_pred CC-EEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCce--eeecCCCCcEEEEecccCCCc
Q 023500 155 GD-KLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI--IASGAADDSVQFFVESKDDLI 231 (281)
Q Consensus 155 ~~-~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~ 231 (281)
+. ++++...++.|.+||....+.. . ...+. +...+..+.|+|++. ++++..++.+.+|+.....+
T Consensus 291 ~~~~~vs~~~~g~i~vvd~~~~~~l--------~-~~~i~--~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l- 358 (543)
T 1nir_A 291 HPEFIVNVKETGKVLLVNYKDIDNL--------T-VTSIG--AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRL- 358 (543)
T ss_dssp SSEEEEEETTTTEEEEEECTTSSSC--------E-EEEEE--CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEE-
T ss_pred CCEEEEEECCCCeEEEEEecCCCcc--------e-eEEec--cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeE-
Confidence 65 5667778999999997642210 1 11111 344566788998874 34555688999997754311
Q ss_pred CCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeC-CCCeEEEEEccc
Q 023500 232 DGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASAS-DDGMIKIWELAN 279 (281)
Q Consensus 232 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~-~Dg~v~iw~~~~ 279 (281)
...+-.....|......+ ++|++..++++++ .|++|.|||+..
T Consensus 359 ----~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 359 ----SALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp ----EEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred ----EEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCC
Confidence 111111112355444333 4677566788876 689999999864
No 144
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.85 E-value=2.8e-19 Score=160.70 Aligned_cols=248 Identities=10% Similarity=0.087 Sum_probs=157.1
Q ss_pred ceeEEEEcCCCCEEEEeeCC---------CcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEE
Q 023500 5 TVRSCAWSPSGKLLATASFD---------ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWE 75 (281)
Q Consensus 5 ~i~~~~~~~~~~~l~tg~~d---------~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~ 75 (281)
.|..++|+|||++||+++.+ +.+.+||..+++...+....+|...+..++|||||++|+.++. ++|++|+
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~ 140 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCA 140 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEES
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEE
Confidence 48999999999999999875 6788999887764334444456666899999999999999886 7999999
Q ss_pred ecCCCeeEEeEeecCCccc------------------eeEEEecCCCCeEEEEecCC-----------------------
Q 023500 76 VMPGNEFECVSVLQGHAQD------------------VKMVQWHPTMDVLFSCSYDN----------------------- 114 (281)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~------------------v~~v~~~p~~~~l~s~s~d~----------------------- 114 (281)
+..+.. ......+... +.++.|+|+++.|++++.|+
T Consensus 141 ~~~g~~---~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (723)
T 1xfd_A 141 HVGKQA---IRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYH 217 (723)
T ss_dssp SSSSCC---EEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEE
T ss_pred CCCCce---EEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceecc
Confidence 876543 2223333322 37899999999999887653
Q ss_pred -----------eEEEEeCCCCCCCCceeeeeeee--ccCCccccEEEEEEccCCCEEEEeeC----CCcEEEEeCCcccc
Q 023500 115 -----------TIKVWWAEDTDSDNWHCVQTISE--SNNGHSSTIWALSFNAKGDKLVSCSD----DLTIKIWGADITRM 177 (281)
Q Consensus 115 -----------~v~~w~~~~~~~~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~~~----d~~i~~w~~~~~~~ 177 (281)
.|++|++..... ...+.. ....+...+..++|+||++.+++... +..|.+||...++.
T Consensus 218 ~~~~G~~~~~~~l~~~d~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~ 292 (723)
T 1xfd_A 218 YPKAGSENPSISLHVIGLNGPTH-----DLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVC 292 (723)
T ss_dssp CCBTTSCCCEEEEEEEESSSSCC-----CEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCE
T ss_pred CCCCCCCCCeeEEEEEECCCCce-----eEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcc
Confidence 688887765321 111210 01123567899999999998876643 35788898764332
Q ss_pred ccCCCCcccceeEEeecccCcce----EEEEeCCCce--eee-cCCCC----cEEEEecc--cCCCcCCccceeeeeecc
Q 023500 178 QSGDGYASWRHLCTISGYHDRTI----FSVHWSREGI--IAS-GAADD----SVQFFVES--KDDLIDGPSYKMLLKKEK 244 (281)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~v----~~~~~~~~~~--~~~-~~~d~----~~~~~~~~--~~~~~~~~~~~~~~~~~~ 244 (281)
. .. ....+...+ ..+.|+|+|. +.. ...++ ..++|... ...... .... ..
T Consensus 293 ~---------~~--~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~--~~~~----l~ 355 (723)
T 1xfd_A 293 T---------KK--HEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSND--NIQS----IT 355 (723)
T ss_dssp E---------EE--EEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSC--CCCB----SC
T ss_pred e---------EE--EEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCcc--ceeE----ee
Confidence 1 11 111112222 2568888874 332 44566 44444332 111000 0111 11
Q ss_pred CCCCCeeE-EEEcCCCCeeEEEeCCC--CeEEEEEcc
Q 023500 245 AHDMDVNS-VQWSPGERRLLASASDD--GMIKIWELA 278 (281)
Q Consensus 245 ~h~~~v~~-~~~~~~~~~~~~s~~~D--g~v~iw~~~ 278 (281)
.+...+.. ++|+|+++.++.++..| +.++||++.
T Consensus 356 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~ 392 (723)
T 1xfd_A 356 SGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSAN 392 (723)
T ss_dssp CSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEEC
T ss_pred cCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEe
Confidence 22334544 69999998766666666 889999975
No 145
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.85 E-value=4.4e-19 Score=159.07 Aligned_cols=248 Identities=14% Similarity=0.205 Sum_probs=160.4
Q ss_pred ccceeEEEEcCCCCEEEEeeCCCcEEEEecCC-----CceeeeeeecCCCCC--------------eeEEEEcCCCCEEE
Q 023500 3 TRTVRSCAWSPSGKLLATASFDATTCIWEDVG-----GDYECVATLEGHENE--------------VKSVSWNASGTLLA 63 (281)
Q Consensus 3 ~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~-----~~~~~~~~~~~h~~~--------------v~~v~~~~~~~~l~ 63 (281)
...+..++|+|||++||.+ .|+.|.+|+..+ ++...+ ...+... +.++.|+|||++|+
T Consensus 120 ~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~--~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la 196 (706)
T 2z3z_A 120 NEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAV--TIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLA 196 (706)
T ss_dssp TTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEES--CSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEE
T ss_pred cccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEe--ccCCCCCeEcccchhhhhcCCCceEEECCCCCEEE
Confidence 4567788999999999985 689999999876 543222 2222232 48899999999999
Q ss_pred Eec---------------------------------CCCcEEEEEecCCCeeEEeEeecCCccceeEEEecCCCCeEEEE
Q 023500 64 TCG---------------------------------RDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSC 110 (281)
Q Consensus 64 s~~---------------------------------~d~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~ 110 (281)
+++ .+..|++||+..+.. ..+.....|...+..++|+|+++.++++
T Consensus 197 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~-~~~~~~~~~~~~~~~~~~spdg~~l~~~ 275 (706)
T 2z3z_A 197 FYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKT-VYLQTGEPKEKFLTNLSWSPDENILYVA 275 (706)
T ss_dssp EEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEE-EECCCCSCTTCEEEEEEECTTSSEEEEE
T ss_pred EEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCce-EeeccCCCCceeEeeEEEECCCCEEEEE
Confidence 887 456899999875532 1122122466778999999999999988
Q ss_pred ecCC-----eEEEEeCCCCCCCCceeeeeeee-ccCCccccEEEEEEcc--CCCEEEEeeCCCcEEEEeCCccccccCCC
Q 023500 111 SYDN-----TIKVWWAEDTDSDNWHCVQTISE-SNNGHSSTIWALSFNA--KGDKLVSCSDDLTIKIWGADITRMQSGDG 182 (281)
Q Consensus 111 s~d~-----~v~~w~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~--~~~~l~s~~~d~~i~~w~~~~~~~~~~~~ 182 (281)
+.++ .|++|++.... ....+.. ........+..+.|+| ++++++++..|+.+++|..+...
T Consensus 276 ~~~~~~~~~~v~~~d~~~g~-----~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~------ 344 (706)
T 2z3z_A 276 EVNRAQNECKVNAYDAETGR-----FVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTG------ 344 (706)
T ss_dssp EECTTSCEEEEEEEETTTCC-----EEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTS------
T ss_pred EeCCCCCeeEEEEEECCCCc-----eeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCC------
Confidence 8776 89999886541 1111211 1111112245689999 99999999999999999764211
Q ss_pred CcccceeEEeecccCcceEE-EEeCCCc--eeeecCCCC--cEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcC
Q 023500 183 YASWRHLCTISGYHDRTIFS-VHWSREG--IIASGAADD--SVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSP 257 (281)
Q Consensus 183 ~~~~~~~~~~~~~~~~~v~~-~~~~~~~--~~~~~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 257 (281)
.....+. .+...+.. +.|++++ +++++..++ ...+|...... +. ... ..|...+..++|+|
T Consensus 345 ----~~~~~l~-~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~---~~-~~~-----l~~~~~~~~~~~sp 410 (706)
T 2z3z_A 345 ----RLIRQVT-KGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKG---GK-TKD-----LTPESGMHRTQLSP 410 (706)
T ss_dssp ----CEEEECC-CSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTC---CC-CEE-----SCCSSSEEEEEECT
T ss_pred ----CEEEecC-CCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCC---CC-cee-----ccCCCceEEEEECC
Confidence 1111221 23445555 6888877 344455544 34555432111 11 111 12556789999999
Q ss_pred CCCeeEEEeCCC---CeEEEEEccc
Q 023500 258 GERRLLASASDD---GMIKIWELAN 279 (281)
Q Consensus 258 ~~~~~~~s~~~D---g~v~iw~~~~ 279 (281)
+++.++.+++.+ +.|++||+..
T Consensus 411 dg~~l~~~~~~~~~p~~i~l~d~~~ 435 (706)
T 2z3z_A 411 DGSAIIDIFQSPTVPRKVTVTNIGK 435 (706)
T ss_dssp TSSEEEEEEECSSCSCEEEEEESSS
T ss_pred CCCEEEEEecCCCCCcEEEEEECCC
Confidence 998766555544 5699999754
No 146
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.84 E-value=8.6e-18 Score=136.89 Aligned_cols=241 Identities=8% Similarity=0.050 Sum_probs=157.1
Q ss_pred EEEcCCCC-EEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEec-CCCcEEEEEecCCCeeEEeE
Q 023500 9 CAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCG-RDKSVWIWEVMPGNEFECVS 86 (281)
Q Consensus 9 ~~~~~~~~-~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~d~~v~~w~~~~~~~~~~~~ 86 (281)
+.|.++++ ++++++.++.|.+||..+++. ...+..+.... +++|+|+|+++++++ .++.|.+||+..+... ..
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~--~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~--~~ 77 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEI--LNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK--VV 77 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCE--EEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE--EE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccce--eeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee--EE
Confidence 34666655 578888999999999887764 33444455666 999999999766555 4899999999766531 23
Q ss_pred eecCCccceeEEEecCCCCeEEEEecCC---eEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEE-ee
Q 023500 87 VLQGHAQDVKMVQWHPTMDVLFSCSYDN---TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS-CS 162 (281)
Q Consensus 87 ~~~~~~~~v~~v~~~p~~~~l~s~s~d~---~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s-~~ 162 (281)
.+..+.....+++|+|++++++++..++ .|.+|+.+... .+..+. +...+..++|+|++++|++ +.
T Consensus 78 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~-----~~~~~~-----~~~~~~~~~~spdg~~l~~~~~ 147 (331)
T 3u4y_A 78 AIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNK-----FISTIP-----IPYDAVGIAISPNGNGLILIDR 147 (331)
T ss_dssp EEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTE-----EEEEEE-----CCTTEEEEEECTTSSCEEEEEE
T ss_pred ecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCC-----eEEEEE-----CCCCccceEECCCCCEEEEEec
Confidence 3344444444599999999988555553 89999886542 222222 1234689999999985554 45
Q ss_pred CCCc-EEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc--eeeecCCCCcEEEEecccCCCcCCccceee
Q 023500 163 DDLT-IKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGAADDSVQFFVESKDDLIDGPSYKML 239 (281)
Q Consensus 163 ~d~~-i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 239 (281)
.++. +.+|+++...... ... .... ........+.++|++ ++++...++.+.+|+....... ..
T Consensus 148 ~~~~~i~~~~~~~~g~~~-----~~~-~~~~--~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~-----~~- 213 (331)
T 3u4y_A 148 SSANTVRRFKIDADGVLF-----DTG-QEFI--SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENI-----TL- 213 (331)
T ss_dssp TTTTEEEEEEECTTCCEE-----EEE-EEEE--CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSC-----EE-
T ss_pred CCCceEEEEEECCCCcEe-----ecC-Cccc--cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCccc-----ce-
Confidence 6688 9999876321100 000 1111 123456788999987 3556667889999987543210 00
Q ss_pred eeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 240 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 240 ~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
..... +...+..++|+|+++.++++...++.|.+||+..
T Consensus 214 ~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~ 252 (331)
T 3u4y_A 214 LNAVG-TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLS 252 (331)
T ss_dssp EEEEE-CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTT
T ss_pred eeecc-CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCC
Confidence 11111 2356788999999987777777788999999764
No 147
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.84 E-value=1.1e-17 Score=137.37 Aligned_cols=239 Identities=9% Similarity=0.071 Sum_probs=162.1
Q ss_pred cceeEEEEcCCCCEEEEeeC-------CCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCE-EEEecCCCcEEEEE
Q 023500 4 RTVRSCAWSPSGKLLATASF-------DATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL-LATCGRDKSVWIWE 75 (281)
Q Consensus 4 ~~i~~~~~~~~~~~l~tg~~-------d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~-l~s~~~d~~v~~w~ 75 (281)
..+..++|+|+|+++++++. ++.|.+||..+++. +..+. .......++|+|+|++ +++...++.|.+||
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~--~~~~~-~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d 117 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEV--TQAIH-NDLKPFGATINNTTQTLWFGNTVNSAVTAID 117 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCE--EEEEE-ESSCCCSEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeE--EEEEe-cCCCcceEEECCCCCEEEEEecCCCEEEEEe
Confidence 45678999999998877764 56899999877653 33333 2345778999999985 45666789999999
Q ss_pred ecCCCeeEEeEeecCCcc---------ceeEEEecCCCCeEEEEe--cCCeEEEEeCCCCCCCCceeeeeeeeccCCccc
Q 023500 76 VMPGNEFECVSVLQGHAQ---------DVKMVQWHPTMDVLFSCS--YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 144 (281)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~---------~v~~v~~~p~~~~l~s~s--~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~ 144 (281)
...++.. ..+..+.. .+..+.|+|+++.++.++ .++.|.+|+.+... ....+. .+..
T Consensus 118 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~-----~~~~~~----~~~~ 185 (353)
T 3vgz_A 118 AKTGEVK---GRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIK-----LKTAIQ----NTGK 185 (353)
T ss_dssp TTTCCEE---EEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTE-----EEEEEC----CCCT
T ss_pred CCCCeeE---EEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCc-----eEEEec----CCCC
Confidence 8766532 22222211 268899999999777665 47899999876532 222221 1233
Q ss_pred cEEEEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeec---ccCcceEEEEeCCCc--eeeecCCCCc
Q 023500 145 TIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISG---YHDRTIFSVHWSREG--IIASGAADDS 219 (281)
Q Consensus 145 ~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~--~~~~~~~d~~ 219 (281)
.+..++|+|+++.|++++.++.+.+||....+.. ..... .+...+..+.+++++ ++++...++.
T Consensus 186 ~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~-----------~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 254 (353)
T 3vgz_A 186 MSTGLALDSEGKRLYTTNADGELITIDTADNKIL-----------SRKKLLDDGKEHFFINISLDTARQRAFITDSKAAE 254 (353)
T ss_dssp TCCCCEEETTTTEEEEECTTSEEEEEETTTTEEE-----------EEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSE
T ss_pred ccceEEECCCCCEEEEEcCCCeEEEEECCCCeEE-----------EEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCE
Confidence 4678899999999999999999999998643321 11111 123346678888876 3455556689
Q ss_pred EEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 220 VQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
+.+|+..... .... ..... ...++|+|+++.++++...++.|.+||+..
T Consensus 255 v~~~d~~~~~-----~~~~----~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 303 (353)
T 3vgz_A 255 VLVVDTRNGN-----ILAK----VAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKS 303 (353)
T ss_dssp EEEEETTTCC-----EEEE----EECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred EEEEECCCCc-----EEEE----EEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCC
Confidence 9999765321 1111 11111 256899999987888888899999999764
No 148
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.83 E-value=4.5e-19 Score=155.65 Aligned_cols=230 Identities=12% Similarity=0.124 Sum_probs=155.3
Q ss_pred ccceeEEEEcCCCCEEEEeeC-CCcEEEEecCCCceeeeeeecCCC-CCeeEEEEcCCCCEEEEecC---CCcEEEEEec
Q 023500 3 TRTVRSCAWSPSGKLLATASF-DATTCIWEDVGGDYECVATLEGHE-NEVKSVSWNASGTLLATCGR---DKSVWIWEVM 77 (281)
Q Consensus 3 ~~~i~~~~~~~~~~~l~tg~~-d~~i~lw~~~~~~~~~~~~~~~h~-~~v~~v~~~~~~~~l~s~~~---d~~v~~w~~~ 77 (281)
..+|+.++|+|||+.||.++. |+++.||+..++.. ..+..|. ..+..++|+|| +.+++++. +...++|.+.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~---~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~ 96 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGET---VKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVN 96 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEE---EECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCc---EeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEe
Confidence 357999999999999999887 99999999765542 3444455 68999999999 77776664 5667787775
Q ss_pred C--CCeeEEeEeecCCccceeEEEecCCCC--eEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEcc
Q 023500 78 P--GNEFECVSVLQGHAQDVKMVQWHPTMD--VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNA 153 (281)
Q Consensus 78 ~--~~~~~~~~~~~~~~~~v~~v~~~p~~~--~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 153 (281)
. ..... .+... ......+|+|+++ .+++++.+ .+.+|+++... ...+.. +.. .+++|+|
T Consensus 97 ~~~~g~~~---~l~~~-~~~~~~~~s~dg~~~~~~s~~~~-~~~l~d~~~g~------~~~l~~----~~~--~~~~~sp 159 (582)
T 3o4h_A 97 TSRPGEEQ---RLEAV-KPMRILSGVDTGEAVVFTGATED-RVALYALDGGG------LRELAR----LPG--FGFVSDI 159 (582)
T ss_dssp TTSTTCCE---ECTTS-CSBEEEEEEECSSCEEEEEECSS-CEEEEEEETTE------EEEEEE----ESS--CEEEEEE
T ss_pred ccCCCccc---cccCC-CCceeeeeCCCCCeEEEEecCCC-CceEEEccCCc------EEEeec----CCC--ceEEECC
Confidence 5 33222 22222 2244668888876 34444444 44599876532 122221 122 6889999
Q ss_pred CCCEEEEeeCC----CcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCce-eeecCCCC--cEEEEecc
Q 023500 154 KGDKLVSCSDD----LTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADD--SVQFFVES 226 (281)
Q Consensus 154 ~~~~l~s~~~d----~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~--~~~~~~~~ 226 (281)
||+.|++++.+ +.|.+||.+.++. + .+. .+...+....|+|+|. ++++..++ .+++|+..
T Consensus 160 DG~~la~~~~~~~~~~~i~~~d~~~g~~---------~---~l~-~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~ 226 (582)
T 3o4h_A 160 RGDLIAGLGFFGGGRVSLFTSNLSSGGL---------R---VFD-SGEGSFSSASISPGMKVTAGLETAREARLVTVDPR 226 (582)
T ss_dssp ETTEEEEEEEEETTEEEEEEEETTTCCC---------E---EEC-CSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTT
T ss_pred CCCEEEEEEEcCCCCeEEEEEcCCCCCc---------e---Eee-cCCCccccceECCCCCEEEEccCCCeeEEEEEcCC
Confidence 99999988776 6788998764322 1 111 2456678899999985 55555677 67777554
Q ss_pred cCCCcCCccceeeeeeccCCCCCeeEEE--------EcCCCCeeEEEeCCCCeEEEEEc
Q 023500 227 KDDLIDGPSYKMLLKKEKAHDMDVNSVQ--------WSPGERRLLASASDDGMIKIWEL 277 (281)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~--------~~~~~~~~~~s~~~Dg~v~iw~~ 277 (281)
... .. ....|...+..++ |+|++ .++++++.|+.++||++
T Consensus 227 ~~~---------~~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 227 DGS---------VE-DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID 274 (582)
T ss_dssp TCC---------EE-ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET
T ss_pred CCc---------EE-EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE
Confidence 321 11 2345666677677 99998 68889999999999987
No 149
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.82 E-value=2.1e-17 Score=136.83 Aligned_cols=258 Identities=11% Similarity=0.063 Sum_probs=157.2
Q ss_pred ceeEEEEcCCCCEEEEeeCCCcEEEEecC-CCceeeeeeecCCCCCeeEEEEcCCCCE--EEEec-------------CC
Q 023500 5 TVRSCAWSPSGKLLATASFDATTCIWEDV-GGDYECVATLEGHENEVKSVSWNASGTL--LATCG-------------RD 68 (281)
Q Consensus 5 ~i~~~~~~~~~~~l~tg~~d~~i~lw~~~-~~~~~~~~~~~~h~~~v~~v~~~~~~~~--l~s~~-------------~d 68 (281)
.+..++|+|+|++|++++.+ .+.+|+.. +++...+.....+ +....++|+|+|++ +++++ .+
T Consensus 41 ~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~ 118 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFA 118 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSC
T ss_pred CCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeecCC
Confidence 57789999999999998888 89999975 5543322222211 23556899999994 55654 68
Q ss_pred CcEEEEEecC-CCeeEEeEeec-CCccceeEEEecCCCCeEEEEec-CCeEEEEeCC-CCCCCCceeeeeeeeccCCccc
Q 023500 69 KSVWIWEVMP-GNEFECVSVLQ-GHAQDVKMVQWHPTMDVLFSCSY-DNTIKVWWAE-DTDSDNWHCVQTISESNNGHSS 144 (281)
Q Consensus 69 ~~v~~w~~~~-~~~~~~~~~~~-~~~~~v~~v~~~p~~~~l~s~s~-d~~v~~w~~~-~~~~~~~~~~~~~~~~~~~h~~ 144 (281)
+++.+|++.. +.....+..+. .+...+.++.|+|++++++++.. ++.|++|+++ ... ...+..+. ...|..
T Consensus 119 g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~---~~~~~~~~--~~~~g~ 193 (365)
T 1jof_A 119 GYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGE---VELVGSVD--APDPGD 193 (365)
T ss_dssp CEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSC---EEEEEEEE--CSSTTC
T ss_pred ceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCC---EEEeeeEe--cCCCCC
Confidence 9999999964 33222222221 24567899999999998877654 6799999886 321 11111121 111335
Q ss_pred cEEEEEEccCCCEEEEeeC-CCcEEEEeCCc--cccccCCCCcccceeEEeec---ccCc------ceEEEE-eCCCce-
Q 023500 145 TIWALSFNAKGDKLVSCSD-DLTIKIWGADI--TRMQSGDGYASWRHLCTISG---YHDR------TIFSVH-WSREGI- 210 (281)
Q Consensus 145 ~v~~~~~~~~~~~l~s~~~-d~~i~~w~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~------~v~~~~-~~~~~~- 210 (281)
.+..++|+|++++|+++.. ++.+.+|+.+. ++... .......+.. .+.. .+..+. ++|+|.
T Consensus 194 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~ 268 (365)
T 1jof_A 194 HPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVY-----THHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKY 268 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE-----EEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSE
T ss_pred CCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEE-----ccceEEcCCCCcCCcccccccccccccEEEECCCCCE
Confidence 5889999999998877664 78999997642 11100 0000111110 0111 467888 999883
Q ss_pred eeecCC-CC-----cEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcC---CCCeeEEEeCCCCeEEEEEccc
Q 023500 211 IASGAA-DD-----SVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSP---GERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 211 ~~~~~~-d~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
++++.. +. .+.+|++... +.. .........+...+..++|+| +++.++++...++.|+||++..
T Consensus 269 l~v~~~~~~~~~~~~i~v~~~~~~----g~~-~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 269 MFASSRANKFELQGYIAGFKLRDC----GSI-EKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp EEEEEEESSTTSCCEEEEEEECTT----SCE-EEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEET
T ss_pred EEEECCCCCCCCCCeEEEEEECCC----CCE-EEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEch
Confidence 444332 22 7999977421 111 111111222444567789999 7876554445569999998753
No 150
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.82 E-value=4.9e-17 Score=133.46 Aligned_cols=238 Identities=9% Similarity=0.054 Sum_probs=150.4
Q ss_pred CCCcEEEEecC--CCceeeeeeecCCCCCeeEEEEcCCCCEEEEecC---CCcEEEEEecCCCeeEEeEeecCCccceeE
Q 023500 23 FDATTCIWEDV--GGDYECVATLEGHENEVKSVSWNASGTLLATCGR---DKSVWIWEVMPGNEFECVSVLQGHAQDVKM 97 (281)
Q Consensus 23 ~d~~i~lw~~~--~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~---d~~v~~w~~~~~~~~~~~~~~~~~~~~v~~ 97 (281)
.++.|.+|+.. +++...+.. ..+......++|+|+|+ |++++. ++.|.+|++..+. ...+..+..+...+..
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~-~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~-~~~~~~~~~~~~~p~~ 90 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGL-LAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQT-AHKLNTVVAPGTPPAY 90 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEE-EEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTE-EEEEEEEEEESCCCSE
T ss_pred CCCCEEEEEEcCCCCeEEEeee-eeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCc-EEEeeeeecCCCCCEE
Confidence 45667777653 444433333 33556678899999999 554443 6899999995443 3344444456677899
Q ss_pred EEecCCCCeEEEEe-cCCeEEEEeCCCCCCCCceeeeeeeeccC-----CccccEEEEEEccCCCEEEEeeCCCcEEEEe
Q 023500 98 VQWHPTMDVLFSCS-YDNTIKVWWAEDTDSDNWHCVQTISESNN-----GHSSTIWALSFNAKGDKLVSCSDDLTIKIWG 171 (281)
Q Consensus 98 v~~~p~~~~l~s~s-~d~~v~~w~~~~~~~~~~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~s~~~d~~i~~w~ 171 (281)
++|+|+++++++++ .+++|.+|++..... ...+..+..... .+...+.+++|+|+++.+++...++.|.+|+
T Consensus 91 ~a~spdg~~l~~~~~~~~~v~v~~~~~~g~--~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~ 168 (347)
T 3hfq_A 91 VAVDEARQLVYSANYHKGTAEVMKIAADGA--LTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYN 168 (347)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECTTSC--EEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEE
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEeCCCCC--eeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEE
Confidence 99999999888877 678999999864221 112222211100 1223578899999999777777788999998
Q ss_pred CCccccccCCCCcccceeEEeecccCcceEEEEeCCCce--eeecCCCCcEEEEecccCCCcCCccceeeeeeccCC---
Q 023500 172 ADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI--IASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAH--- 246 (281)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h--- 246 (281)
++... ...............+..+.|+|++. +++...++.+.+|+..... +.. . ........
T Consensus 169 ~~~~g--------~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~---g~~-~-~~~~~~~~~~~ 235 (347)
T 3hfq_A 169 VSDAG--------QLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQT---GAF-T-QLGIVKTIPAD 235 (347)
T ss_dssp ECTTS--------CEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTT---TEE-E-EEEEEESSCTT
T ss_pred ECCCC--------cEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCC---Cce-E-EeeeeeecCCC
Confidence 76211 01111111111233566789999874 4455678899999765311 110 1 11111111
Q ss_pred ---CCCeeEEEEcCCCCeeEEEeCCCCeEEEEEcc
Q 023500 247 ---DMDVNSVQWSPGERRLLASASDDGMIKIWELA 278 (281)
Q Consensus 247 ---~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~ 278 (281)
...+..++|+|+++.+++++..++.|.+|++.
T Consensus 236 ~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 236 YTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp CCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred CCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 13488899999998777888889999999985
No 151
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.81 E-value=2.4e-17 Score=134.93 Aligned_cols=244 Identities=7% Similarity=0.038 Sum_probs=153.8
Q ss_pred EEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCC-CCeeEEEEcCCCCEE-EEecCCCcEEEEEecCCCeeEEe
Q 023500 8 SCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHE-NEVKSVSWNASGTLL-ATCGRDKSVWIWEVMPGNEFECV 85 (281)
Q Consensus 8 ~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~-~~v~~v~~~~~~~~l-~s~~~d~~v~~w~~~~~~~~~~~ 85 (281)
.++++++++++++++.++.|.+||..+++. +..+..+. ..+..++|+|+|+++ ++++.++.|.+||+..++. .
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~--~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~---~ 78 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTV--YKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN---T 78 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEE--EEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE---E
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcE--EEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcE---E
Confidence 356788899999999999999999877653 44444332 257889999999865 5666789999999875543 2
Q ss_pred Eeec-CC-----ccceeEEEecCCCCeEEEEecC------------CeEEEEeCCCCCCCCceeeeeeeeccCCccccEE
Q 023500 86 SVLQ-GH-----AQDVKMVQWHPTMDVLFSCSYD------------NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIW 147 (281)
Q Consensus 86 ~~~~-~~-----~~~v~~v~~~p~~~~l~s~s~d------------~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 147 (281)
..+. .+ ...+..+.|+|+++++++++.+ +.|.+|+++..... +.+.... +...+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~--~~~~~~~-----~~~~~~ 151 (349)
T 1jmx_B 79 FHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEA--KPVRTFP-----MPRQVY 151 (349)
T ss_dssp EEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGB--CCSEEEE-----CCSSCC
T ss_pred EEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcccc--ceeeecc-----CCCccc
Confidence 2222 22 3347899999999999888865 89999988653211 1111111 233577
Q ss_pred EEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcc--------------c----------cee-EEee---------
Q 023500 148 ALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYAS--------------W----------RHL-CTIS--------- 193 (281)
Q Consensus 148 ~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~--------------~----------~~~-~~~~--------- 193 (281)
+++|+|+++ ++.++. .|.+||.+..+......... | .+. ..+.
T Consensus 152 ~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 228 (349)
T 1jmx_B 152 LMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPAT 228 (349)
T ss_dssp CEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CC
T ss_pred ceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccc
Confidence 899999999 555544 49999976443211100000 0 000 0000
Q ss_pred ----------c------------ccCcceEEEEeCC-Cce-eeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCC
Q 023500 194 ----------G------------YHDRTIFSVHWSR-EGI-IASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMD 249 (281)
Q Consensus 194 ----------~------------~~~~~v~~~~~~~-~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 249 (281)
. .....+..+.+++ ++. ++++ ++.+.+|+.... . ...... ....
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~-----~----~~~~~~-~~~~ 296 (349)
T 1jmx_B 229 ADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQR-----K----LIKAAN-LDHT 296 (349)
T ss_dssp CEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTT-----E----EEEEEE-CSSC
T ss_pred cccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccC-----e----EEEEEc-CCCC
Confidence 0 0112345667778 764 4433 788999976432 1 111111 2234
Q ss_pred eeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 250 VNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 250 v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
+.+++|+|+++.+++ ++.++.|++||+..
T Consensus 297 ~~~~~~s~dg~~l~~-~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 297 YYCVAFDKKGDKLYL-GGTFNDLAVFNPDT 325 (349)
T ss_dssp CCEEEECSSSSCEEE-ESBSSEEEEEETTT
T ss_pred ccceEECCCCCEEEE-ecCCCeEEEEeccc
Confidence 778999999876654 67789999999864
No 152
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.80 E-value=6.2e-18 Score=157.78 Aligned_cols=190 Identities=8% Similarity=0.017 Sum_probs=140.9
Q ss_pred ccceeEEEEc-CCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCC-CeeEEEEcCCCCEEEEecCCCcEE-EEEecCC
Q 023500 3 TRTVRSCAWS-PSGKLLATASFDATTCIWEDVGGDYECVATLEGHEN-EVKSVSWNASGTLLATCGRDKSVW-IWEVMPG 79 (281)
Q Consensus 3 ~~~i~~~~~~-~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~-~v~~v~~~~~~~~l~s~~~d~~v~-~w~~~~~ 79 (281)
...+..++|+ |||++||+++ ++.+.+|+..++.. ..+..|.+ .+..++|+ +|+.|+.++.+..+. +|++..+
T Consensus 295 ~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~ 369 (1045)
T 1k32_A 295 IPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYV---LKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTG 369 (1045)
T ss_dssp CGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBE---EECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTC
T ss_pred ccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCce---EEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCC
Confidence 3468999999 9999999887 78899998776542 34566777 89999999 999999998888888 8887654
Q ss_pred CeeEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEE
Q 023500 80 NEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV 159 (281)
Q Consensus 80 ~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 159 (281)
.. ..+.+|...+..++|+|+++.+++++.++.|++|+++... ...+. .+|...+..++|+|++++|+
T Consensus 370 ~~----~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~------~~~~~---~~~~~~v~~~~~SpDG~~la 436 (1045)
T 1k32_A 370 KA----EKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK------PTVIE---RSREAMITDFTISDNSRFIA 436 (1045)
T ss_dssp CE----EECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCC------EEEEE---ECSSSCCCCEEECTTSCEEE
T ss_pred Cc----eEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCc------eEEec---cCCCCCccceEECCCCCeEE
Confidence 32 2334777889999999999999999999999999987542 11121 24677788999999999998
Q ss_pred EeeCCC----------cEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCce-eeecCCCCcEEEE
Q 023500 160 SCSDDL----------TIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSVQFF 223 (281)
Q Consensus 160 s~~~d~----------~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~~~~~ 223 (281)
+++.++ .|++||.+.++. ..+. .+...+..+.|+++|. ++..+.++....|
T Consensus 437 ~~~~~~~~~~~~~~~~~i~l~d~~~g~~------------~~l~-~~~~~~~~~~~spdG~~l~~~s~~~~~~~~ 498 (1045)
T 1k32_A 437 YGFPLKHGETDGYVMQAIHVYDMEGRKI------------FAAT-TENSHDYAPAFDADSKNLYYLSYRSLDPSP 498 (1045)
T ss_dssp EEEEECSSTTCSCCEEEEEEEETTTTEE------------EECS-CSSSBEEEEEECTTSCEEEEEESCCCCCEE
T ss_pred EEecCccccccCCCCCeEEEEECCCCcE------------EEee-CCCcccCCceEcCCCCEEEEEecccCCcCc
Confidence 887654 899999864321 1111 2345567788998874 5555554444444
No 153
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.80 E-value=2.7e-18 Score=154.28 Aligned_cols=245 Identities=13% Similarity=0.123 Sum_probs=150.5
Q ss_pred EEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCC---CeeEEEEcCCCCEEEEecC---------CCcEEEEE
Q 023500 8 SCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHEN---EVKSVSWNASGTLLATCGR---------DKSVWIWE 75 (281)
Q Consensus 8 ~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~---~v~~v~~~~~~~~l~s~~~---------d~~v~~w~ 75 (281)
.++|+|+|++++++ .|+.|.+||..+++.. ..+.+|.. .+.+++|||||++|++++. |++|++||
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d 96 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQSY--TILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD 96 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCCEE--EEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCcEE--EEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEE
Confidence 67899999766654 6999999999877643 33343433 4899999999999998876 78999999
Q ss_pred ecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccE---------
Q 023500 76 VMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTI--------- 146 (281)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v--------- 146 (281)
+..+.... ...+ ...+..++|+|+++.|+.++ |+.|++|++..... . .+. ..++...+
T Consensus 97 ~~~g~~~~-~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~-----~-~l~--~~~~~~~v~~g~~~~v~ 163 (719)
T 1z68_A 97 LSNGEFVR-GNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPP-----F-QIT--FNGRENKIFNGIPDWVY 163 (719)
T ss_dssp TTTTEECC-SSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCC-----E-ECC--CCCBTTTEEESSCCHHH
T ss_pred CCCCcccc-ceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCc-----E-EEe--cCCCcCCeEccccccee
Confidence 87553200 0112 24588999999999999876 78999998765421 1 111 01222211
Q ss_pred --------EEEEEccCCCEEEEeeCCC----------------------------------cEEEEeCCccccccCCCCc
Q 023500 147 --------WALSFNAKGDKLVSCSDDL----------------------------------TIKIWGADITRMQSGDGYA 184 (281)
Q Consensus 147 --------~~~~~~~~~~~l~s~~~d~----------------------------------~i~~w~~~~~~~~~~~~~~ 184 (281)
.++.|+|||+.|+.++.|. .|.+||.+.+.......+
T Consensus 164 ~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~- 242 (719)
T 1z68_A 164 EEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEV- 242 (719)
T ss_dssp HHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEEC-
T ss_pred eeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEc-
Confidence 4799999999999987552 677787764332100000
Q ss_pred ccceeEEeecccCcceEEEEeCCCceeeecC---CCC--cEEEEe----cccCCCcCCccceeeee-eccCCCCCee---
Q 023500 185 SWRHLCTISGYHDRTIFSVHWSREGIIASGA---ADD--SVQFFV----ESKDDLIDGPSYKMLLK-KEKAHDMDVN--- 251 (281)
Q Consensus 185 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~---~d~--~~~~~~----~~~~~~~~~~~~~~~~~-~~~~h~~~v~--- 251 (281)
.....+ ..+...+..+.|+|++.++... .++ .+.+|+ ...... ..+.. ....|...+.
T Consensus 243 --~~~~~~-~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~------~~~~~~~~~~~~~~~~~~~ 313 (719)
T 1z68_A 243 --PVPAMI-ASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDC------PKTQEHIEESRTGWAGGFF 313 (719)
T ss_dssp --CCCHHH-HTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEEC------CGGGEEEEECSSSCSSSSS
T ss_pred --cCCccC-CCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCce------EEEEecccccCCceEcccc
Confidence 000000 1245667889999998655432 222 355565 322110 01110 0124566666
Q ss_pred --EEEEcCCCCeeEE-EeCCCCe--EEEEEcc
Q 023500 252 --SVQWSPGERRLLA-SASDDGM--IKIWELA 278 (281)
Q Consensus 252 --~~~~~~~~~~~~~-s~~~Dg~--v~iw~~~ 278 (281)
.+.|+|+++.++. ++..+|. |.+|++.
T Consensus 314 ~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~ 345 (719)
T 1z68_A 314 VSTPVFSYDAISYYKIFSDKDGYKHIHYIKDT 345 (719)
T ss_dssp CCCCEECTTSSCEEEEEECTTSCEEEEEESSC
T ss_pred CCccEECCCCCeEEEEEEccCCceEEEEEECC
Confidence 7899999876544 4555665 5555543
No 154
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.80 E-value=3.8e-17 Score=152.51 Aligned_cols=242 Identities=10% Similarity=0.021 Sum_probs=166.0
Q ss_pred ceeEEEEcCCCCEEEEeeCCCcEE-EEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeE
Q 023500 5 TVRSCAWSPSGKLLATASFDATTC-IWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFE 83 (281)
Q Consensus 5 ~i~~~~~~~~~~~l~tg~~d~~i~-lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~ 83 (281)
.+..++|+ +|+.|+.++.++.+. +|+..++.. ..+.+|...+..++|+|+|++|++++.++.|++||+..+..
T Consensus 339 ~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~---~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~-- 412 (1045)
T 1k32_A 339 RYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKA---EKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKP-- 412 (1045)
T ss_dssp EEEEECSS-SEEEEEEEETTEEEEEEEETTTCCE---EECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCE--
T ss_pred eEEeeeEc-CCCeEEEEECCCceEEEEECCCCCc---eEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCce--
Confidence 68889999 999999999888888 888776543 23347888999999999999999999999999999976643
Q ss_pred EeEeecCCccceeEEEecCCCCeEEEEecCC----------eEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEcc
Q 023500 84 CVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN----------TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNA 153 (281)
Q Consensus 84 ~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~----------~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 153 (281)
...+.+|...+..++|+|+++++++++.++ .|++|++.... ...+ ..|...+..+.|+|
T Consensus 413 -~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~------~~~l----~~~~~~~~~~~~sp 481 (1045)
T 1k32_A 413 -TVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK------IFAA----TTENSHDYAPAFDA 481 (1045)
T ss_dssp -EEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE------EEEC----SCSSSBEEEEEECT
T ss_pred -EEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc------EEEe----eCCCcccCCceEcC
Confidence 334457888899999999999998887654 99999886531 1222 24666788899999
Q ss_pred CCCEEEEeeCCCcEEEEeCCccccccC------------CC-------------------Ccc-cceeEEeecccCcceE
Q 023500 154 KGDKLVSCSDDLTIKIWGADITRMQSG------------DG-------------------YAS-WRHLCTISGYHDRTIF 201 (281)
Q Consensus 154 ~~~~l~s~~~d~~i~~w~~~~~~~~~~------------~~-------------------~~~-~~~~~~~~~~~~~~v~ 201 (281)
+++.|+..+.++..+.|+......... .. ... ......+. .+...+.
T Consensus 482 dG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~-~~~~~~~ 560 (1045)
T 1k32_A 482 DSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPIN-VDPGDYR 560 (1045)
T ss_dssp TSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECS-CCCBCEE
T ss_pred CCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcC-CCCCChh
Confidence 999999999888777786432111000 00 000 00011111 1345677
Q ss_pred EEEeCCCce-eee-----------cCC--CCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeC
Q 023500 202 SVHWSREGI-IAS-----------GAA--DDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASAS 267 (281)
Q Consensus 202 ~~~~~~~~~-~~~-----------~~~--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~ 267 (281)
.+.+++++. +++ .+. ...+.+|+.... . ...+. ..+..++|+|+++.+ ++++
T Consensus 561 ~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~-----~-~~~l~-------~~v~~~~~S~DG~~l-~~~~ 626 (1045)
T 1k32_A 561 MIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTR-----K-VTEVK-------NNLTDLRLSADRKTV-MVRK 626 (1045)
T ss_dssp EEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTC-----C-EEEEE-------EEEEEEEECTTSCEE-EEEE
T ss_pred heEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCC-----c-EEEee-------cCcceEEECCCCCEE-EEEc
Confidence 888898885 332 122 335555644332 1 11111 457889999999865 4565
Q ss_pred CCCeEEEEEccc
Q 023500 268 DDGMIKIWELAN 279 (281)
Q Consensus 268 ~Dg~v~iw~~~~ 279 (281)
.| .+++||+..
T Consensus 627 ~~-~i~~~d~~~ 637 (1045)
T 1k32_A 627 DD-GKIYTFPLE 637 (1045)
T ss_dssp TT-SCEEEEESS
T ss_pred CC-cEEEEeCcc
Confidence 55 799999864
No 155
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.80 E-value=4.7e-16 Score=127.50 Aligned_cols=230 Identities=8% Similarity=0.108 Sum_probs=155.0
Q ss_pred ceeEEEEcCCCCE-EEEeeCCCcEEEEecCCCceeeeeeecCCCC---------CeeEEEEcCCCCEEEEec--CCCcEE
Q 023500 5 TVRSCAWSPSGKL-LATASFDATTCIWEDVGGDYECVATLEGHEN---------EVKSVSWNASGTLLATCG--RDKSVW 72 (281)
Q Consensus 5 ~i~~~~~~~~~~~-l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~---------~v~~v~~~~~~~~l~s~~--~d~~v~ 72 (281)
.+..++|+|+|++ +++...++.|.+||..+++. +..+..+.. ...+++|+|+|++++.++ .++.|.
T Consensus 90 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~ 167 (353)
T 3vgz_A 90 KPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEV--KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIW 167 (353)
T ss_dssp CCCSEEEETTTTEEEEEETTTTEEEEEETTTCCE--EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEE
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEeCCCCee--EEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEE
Confidence 4567899999995 55556679999999887754 333333322 268899999999876665 578999
Q ss_pred EEEecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEc
Q 023500 73 IWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFN 152 (281)
Q Consensus 73 ~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 152 (281)
+||+...+ ....+..+...+..+.|+|+++.+++++.++.+.+|+..... ....+.....++...+..++|+
T Consensus 168 ~~d~~~~~---~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~-----~~~~~~~~~~~~~~~~~~~~~s 239 (353)
T 3vgz_A 168 VVDGGNIK---LKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNK-----ILSRKKLLDDGKEHFFINISLD 239 (353)
T ss_dssp EEETTTTE---EEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTE-----EEEEEECCCSSSCCCEEEEEEE
T ss_pred EEcCCCCc---eEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCe-----EEEEEEcCCCCCCcccceEEEC
Confidence 99986553 234444455568899999999999999999999999876542 2223322222355667889999
Q ss_pred cCCCEEEEee-CCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc--eeeecCCCCcEEEEecccCC
Q 023500 153 AKGDKLVSCS-DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGAADDSVQFFVESKDD 229 (281)
Q Consensus 153 ~~~~~l~s~~-~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~ 229 (281)
|+++.++.++ .++.|.+||....+. ...+.. . . ...+.+++++ ++++...++.+.+|+.....
T Consensus 240 ~dg~~l~~~~~~~~~v~~~d~~~~~~-----------~~~~~~-~-~-~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~ 305 (353)
T 3vgz_A 240 TARQRAFITDSKAAEVLVVDTRNGNI-----------LAKVAA-P-E-SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYK 305 (353)
T ss_dssp TTTTEEEEEESSSSEEEEEETTTCCE-----------EEEEEC-S-S-CCCEEEETTTTEEEEEETTTTEEEEEETTTTE
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCcE-----------EEEEEc-C-C-CceEEECCCCCEEEEEECCCCeEEEEECCCCe
Confidence 9998766655 458999999864321 111111 1 1 2456777765 45666678999999764321
Q ss_pred CcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCC
Q 023500 230 LIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASD 268 (281)
Q Consensus 230 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~ 268 (281)
....... ...+.+++|+|+++.++++...
T Consensus 306 ---------~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 306 ---------VVKTFDT-PTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp ---------EEEEEEC-CSEEEEEEECTTSCEEEEEEEC
T ss_pred ---------EEEEEec-CCCCCeEEEcCCCCEEEEEEcc
Confidence 1111122 2357899999999877766554
No 156
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.79 E-value=2.6e-16 Score=128.07 Aligned_cols=237 Identities=13% Similarity=0.107 Sum_probs=149.9
Q ss_pred CEEEEeeCCCcEEEEecCCCceeeeeeec-CCCC-CeeEEEEcCCCCEE-EEecCCCcEEEEEecCCCeeEEeEeecC--
Q 023500 16 KLLATASFDATTCIWEDVGGDYECVATLE-GHEN-EVKSVSWNASGTLL-ATCGRDKSVWIWEVMPGNEFECVSVLQG-- 90 (281)
Q Consensus 16 ~~l~tg~~d~~i~lw~~~~~~~~~~~~~~-~h~~-~v~~v~~~~~~~~l-~s~~~d~~v~~w~~~~~~~~~~~~~~~~-- 90 (281)
++|++++.++.|.+||..+++. +..+. ++.. .+..++|+|+|+++ ++++.++.|.+||+..++....+. ...
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~--~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~-~~~~~ 78 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAV--DKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRID-LSTPE 78 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEE--EEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEE-CCBTT
T ss_pred cEEEEcCCCCeEEEEECCCCcE--EEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEE-cCCcc
Confidence 4789999999999999877653 34443 2221 47889999999765 566778999999987665322111 111
Q ss_pred -CccceeEEEecCCCCeEEEEe------------cCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCE
Q 023500 91 -HAQDVKMVQWHPTMDVLFSCS------------YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDK 157 (281)
Q Consensus 91 -~~~~v~~v~~~p~~~~l~s~s------------~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 157 (281)
|...+..++|+|+++.+++++ .++.|.+|+..... ....+.. ...+..++|+|++++
T Consensus 79 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~-----~~~~~~~-----~~~~~~~~~s~dg~~ 148 (337)
T 1pby_B 79 ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS-----RRKAFEA-----PRQITMLAWARDGSK 148 (337)
T ss_dssp EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE-----EEEEEEC-----CSSCCCEEECTTSSC
T ss_pred cccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCc-----EEEEEeC-----CCCcceeEECCCCCE
Confidence 223578899999999888876 57999999886432 2222221 234677899999998
Q ss_pred EEEeeCCCcEEEEeCCccccccC--CCC--c--ccc-------------------------------------eeEEee-
Q 023500 158 LVSCSDDLTIKIWGADITRMQSG--DGY--A--SWR-------------------------------------HLCTIS- 193 (281)
Q Consensus 158 l~s~~~d~~i~~w~~~~~~~~~~--~~~--~--~~~-------------------------------------~~~~~~- 193 (281)
|+++ ++.|.+||....+.... ... . .+. .+..+.
T Consensus 149 l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 226 (337)
T 1pby_B 149 LYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDL 226 (337)
T ss_dssp EEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEET
T ss_pred EEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeC
Confidence 8877 67899999764432110 000 0 000 000000
Q ss_pred ----------cccCcceEEEEeCCCceeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeE
Q 023500 194 ----------GYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLL 263 (281)
Q Consensus 194 ----------~~~~~~v~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 263 (281)
..+...+..+.+++++..+..+ ++.+.+|+..... ...... ....+.+++|+|+++.++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~v~~~d~~~~~---------~~~~~~-~~~~~~~~~~s~dg~~l~ 295 (337)
T 1pby_B 227 ETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-YNVLESFDLEKNA---------SIKRVP-LPHSYYSVNVSTDGSTVW 295 (337)
T ss_dssp TTCCEEEEEEEECSSCEEEEEECTTSSEEEEE-ESEEEEEETTTTE---------EEEEEE-CSSCCCEEEECTTSCEEE
T ss_pred CCCCceEeecCCCCCceeeEEECCCCCEEEEe-CCeEEEEECCCCc---------Ccceec-CCCceeeEEECCCCCEEE
Confidence 0112234568888887433333 7889999764321 111111 224578999999987655
Q ss_pred EEeCCCCeEEEEEccc
Q 023500 264 ASASDDGMIKIWELAN 279 (281)
Q Consensus 264 ~s~~~Dg~v~iw~~~~ 279 (281)
+++.|+.|++||+..
T Consensus 296 -~~~~~~~i~v~d~~~ 310 (337)
T 1pby_B 296 -LGGALGDLAAYDAET 310 (337)
T ss_dssp -EESBSSEEEEEETTT
T ss_pred -EEcCCCcEEEEECcC
Confidence 557799999999864
No 157
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.77 E-value=3.6e-15 Score=122.98 Aligned_cols=257 Identities=9% Similarity=0.026 Sum_probs=154.8
Q ss_pred CCCCEEEEee----CCCcEEEEec--CCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCC----CcEEEEEecCC-Ce
Q 023500 13 PSGKLLATAS----FDATTCIWED--VGGDYECVATLEGHENEVKSVSWNASGTLLATCGRD----KSVWIWEVMPG-NE 81 (281)
Q Consensus 13 ~~~~~l~tg~----~d~~i~lw~~--~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d----~~v~~w~~~~~-~~ 81 (281)
+...++..|+ .++.|.+|.. .+++...+... +......++|+|+|++|++++.+ +.|.+|++... ..
T Consensus 11 ~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~--~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~ 88 (361)
T 3scy_A 11 DSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA--EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGT 88 (361)
T ss_dssp GGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE--ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTE
T ss_pred CCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc--cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCc
Confidence 3344556664 4568999865 44555545444 66777889999999999988876 79999999764 34
Q ss_pred eEEeEeecCCccceeEEEecCCCCeEEEEe-cCCeEEEEeCCCCCCCCceeeeeeeec------cCCccccEEEEEEccC
Q 023500 82 FECVSVLQGHAQDVKMVQWHPTMDVLFSCS-YDNTIKVWWAEDTDSDNWHCVQTISES------NNGHSSTIWALSFNAK 154 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s-~d~~v~~w~~~~~~~~~~~~~~~~~~~------~~~h~~~v~~~~~~~~ 154 (281)
...+.....+......+++ +++.+++++ .++.|.+|++........ ........ ...+...+.+++|+|+
T Consensus 89 ~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~spd 165 (361)
T 3scy_A 89 LHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLP-ASDVIEFKGSGPDKERQTMPHLHCVRITPD 165 (361)
T ss_dssp EEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCS-CSEEEECCCCCSCTTTCSSCCEEEEEECTT
T ss_pred EEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcc-cceeEEccCCCCCccccCCCcceEEEECCC
Confidence 4444444445555677777 777666665 678999999864321100 00000000 0112344688999999
Q ss_pred CCEEEEe-eCCCcEEEEeCCccccccCCC-CcccceeEEeecccCcceEEEEeCCCce-e-eecCCCCcEEEEecccCCC
Q 023500 155 GDKLVSC-SDDLTIKIWGADITRMQSGDG-YASWRHLCTISGYHDRTIFSVHWSREGI-I-ASGAADDSVQFFVESKDDL 230 (281)
Q Consensus 155 ~~~l~s~-~~d~~i~~w~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~-~~~~~d~~~~~~~~~~~~~ 230 (281)
+++|+.+ ..++.+.+|+++......... +................+..+.|+|++. + ++...++.+.+|+.....+
T Consensus 166 g~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~ 245 (361)
T 3scy_A 166 GKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGML 245 (361)
T ss_dssp SSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEE
T ss_pred CCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCce
Confidence 9966554 458899999875321100000 0000000111112344567899999873 4 4444688999997753211
Q ss_pred cCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCC-CCeEEEEEcc
Q 023500 231 IDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASD-DGMIKIWELA 278 (281)
Q Consensus 231 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~-Dg~v~iw~~~ 278 (281)
. ..........+......++|+|+++.++++... ++.|.+|++.
T Consensus 246 ~----~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 246 D----EIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp E----EEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred E----EeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 0 001111222344557899999999877777766 7899999985
No 158
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.76 E-value=3.3e-17 Score=147.70 Aligned_cols=155 Identities=17% Similarity=0.168 Sum_probs=106.1
Q ss_pred ceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCC-----eeEEEEcCCCCEEEEecCC---------Cc
Q 023500 5 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENE-----VKSVSWNASGTLLATCGRD---------KS 70 (281)
Q Consensus 5 ~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~-----v~~v~~~~~~~~l~s~~~d---------~~ 70 (281)
....++|+|||++++++ |+.|.+|+..+++. ...+.+|... ...++|||||++|+.++.+ +.
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~ 93 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNS--SVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTAS 93 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCE--EEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCce--EEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceE
Confidence 45688999999999886 99999999987764 3345566532 2458899999999998876 45
Q ss_pred EEEEEecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeee---ccCCcc----
Q 023500 71 VWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISE---SNNGHS---- 143 (281)
Q Consensus 71 v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~---~~~~h~---- 143 (281)
+.+||+..++ ...+..|...+..++|+|+++.|+.++ |+.|++|+...... +.+..-.. ...++.
T Consensus 94 ~~~~d~~~~~----~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~---~~lt~~g~~~~~~~g~~~~v~ 165 (740)
T 4a5s_A 94 YDIYDLNKRQ----LITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPS---YRITWTGKEDIIYNGITDWVY 165 (740)
T ss_dssp EEEEETTTTE----ECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCC---EECCSCCBTTTEEESBCCHHH
T ss_pred EEEEECCCCc----EEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCce---EEEcCCCCccceecCcccccc
Confidence 6699987653 233566777899999999999998874 78999998765421 01100000 001111
Q ss_pred -----ccEEEEEEccCCCEEEEeeCCCc-EEEEe
Q 023500 144 -----STIWALSFNAKGDKLVSCSDDLT-IKIWG 171 (281)
Q Consensus 144 -----~~v~~~~~~~~~~~l~s~~~d~~-i~~w~ 171 (281)
.....+.|||||+.|+..+.|.. +++|+
T Consensus 166 ~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~ 199 (740)
T 4a5s_A 166 EEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIE 199 (740)
T ss_dssp HHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEE
T ss_pred cchhcCCCcceEECCCCCEEEEEEEcccCCceEE
Confidence 11235899999999988764432 44443
No 159
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.75 E-value=4.4e-17 Score=146.39 Aligned_cols=249 Identities=12% Similarity=0.112 Sum_probs=151.6
Q ss_pred ceeEEEEcCCCCEEEEeeC---------CCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEE
Q 023500 5 TVRSCAWSPSGKLLATASF---------DATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWE 75 (281)
Q Consensus 5 ~i~~~~~~~~~~~l~tg~~---------d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~ 75 (281)
.|..++|+|||++||.++. |+.|.+||..+++......+ ...+..++|||||++|+.++ |++|++|+
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~ 136 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQ 136 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEES
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEe
Confidence 3889999999999998876 78999999887753100222 25688999999999999886 68999999
Q ss_pred ecCCCeeEEeEeecCCccc-----------------eeEEEecCCCCeEEEEecCC------------------------
Q 023500 76 VMPGNEFECVSVLQGHAQD-----------------VKMVQWHPTMDVLFSCSYDN------------------------ 114 (281)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~-----------------v~~v~~~p~~~~l~s~s~d~------------------------ 114 (281)
+..+.... + ...++... ..++.|+|+++.|++++.|.
T Consensus 137 ~~~g~~~~-l-~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~y 214 (719)
T 1z68_A 137 RPGDPPFQ-I-TFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPY 214 (719)
T ss_dssp STTSCCEE-C-CCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEEC
T ss_pred CCCCCcEE-E-ecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecC
Confidence 87654321 1 11222221 25899999999999888663
Q ss_pred ----------eEEEEeCCCCCCCCceeeeeee--eccCCccccEEEEEEccCCCEEEEeeCC----CcEEEEe----CCc
Q 023500 115 ----------TIKVWWAEDTDSDNWHCVQTIS--ESNNGHSSTIWALSFNAKGDKLVSCSDD----LTIKIWG----ADI 174 (281)
Q Consensus 115 ----------~v~~w~~~~~~~~~~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~~~d----~~i~~w~----~~~ 174 (281)
.|++|++........ ..+. ....+|...+..++|+||++.+++.... ..|.+|| ...
T Consensus 215 p~~g~~~~~~~l~~~d~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~ 291 (719)
T 1z68_A 215 PKAGAKNPVVRIFIIDTTYPAYVGP---QEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQT 291 (719)
T ss_dssp CBTTSCCCEEEEEEEESSCHHHHCC---EECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSS
T ss_pred CCCCCCCCeeEEEEEECCCCCccce---eEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCC
Confidence 677887764321000 0110 0112577788999999998777764422 2477777 543
Q ss_pred cccccCCCCcccceeEEeecccCcceE-----EEEeCCCce--ee-ecCCCCcEEEEecccCCCcCCccceeeeeeccCC
Q 023500 175 TRMQSGDGYASWRHLCTISGYHDRTIF-----SVHWSREGI--IA-SGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAH 246 (281)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~v~-----~~~~~~~~~--~~-~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 246 (281)
++... ........+...+. .+.|+++|. ++ +...++...+|...... +. .. ....+
T Consensus 292 g~~~~--------~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~---~~-~~----~lt~~ 355 (719)
T 1z68_A 292 WDCPK--------TQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTV---EN-AI----QITSG 355 (719)
T ss_dssp EECCG--------GGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCS---TT-CE----ECSCS
T ss_pred CceEE--------EEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCC---Cc-eE----ecccC
Confidence 32110 00000011233333 567888773 22 44456655555432211 11 11 12234
Q ss_pred CCCeeEEEEcCCCCeeEEEeCC----CCeEEEEEccc
Q 023500 247 DMDVNSVQWSPGERRLLASASD----DGMIKIWELAN 279 (281)
Q Consensus 247 ~~~v~~~~~~~~~~~~~~s~~~----Dg~v~iw~~~~ 279 (281)
...+..+.+. +++.+++++.. ++..+||.+..
T Consensus 356 ~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 356 KWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp SSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred ceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 4557777777 77777777765 68899998753
No 160
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.74 E-value=3.1e-14 Score=116.10 Aligned_cols=248 Identities=14% Similarity=0.110 Sum_probs=164.6
Q ss_pred cceeEEEEcCCCCEEEEeeCC------------------------CcEEEEecCCCceeeeeeec-CCCCCeeEEEEcCC
Q 023500 4 RTVRSCAWSPSGKLLATASFD------------------------ATTCIWEDVGGDYECVATLE-GHENEVKSVSWNAS 58 (281)
Q Consensus 4 ~~i~~~~~~~~~~~l~tg~~d------------------------~~i~lw~~~~~~~~~~~~~~-~h~~~v~~v~~~~~ 58 (281)
..+..++++|+|+++++...+ +.|.+||..+++. +..+. ++-.....++++|+
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~--~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEI--LQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCE--EEEECTTTCSSEEEEEECTT
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeE--EeccCCCccCCceEEEECCC
Confidence 468899999999999988877 4799999876654 23332 34457789999999
Q ss_pred CCEEEEecCCCcEEEEEecCCCeeEEeEee---------cCCccceeEEEecC-CCCeEEEEe-cCCeEEEEeCCCCCCC
Q 023500 59 GTLLATCGRDKSVWIWEVMPGNEFECVSVL---------QGHAQDVKMVQWHP-TMDVLFSCS-YDNTIKVWWAEDTDSD 127 (281)
Q Consensus 59 ~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~---------~~~~~~v~~v~~~p-~~~~l~s~s-~d~~v~~w~~~~~~~~ 127 (281)
|+++++...++.|++|+..... ..+..+ .++-.....++++| ++.++++.+ .++.|++|+.+..
T Consensus 102 g~l~v~d~~~~~v~~~~~~g~~--~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~--- 176 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDPHSKE--GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGK--- 176 (329)
T ss_dssp SCEEEEETTTTEEEEECTTCSS--CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSC---
T ss_pred CCEEEEECCCCEEEEEeCCCCe--EEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCC---
Confidence 9999999999999999964321 012222 23444678999999 788888887 6899999974321
Q ss_pred Cceeeeeeeecc------CCccccEEEEEEccC-CCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEee-cccCcc
Q 023500 128 NWHCVQTISESN------NGHSSTIWALSFNAK-GDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTIS-GYHDRT 199 (281)
Q Consensus 128 ~~~~~~~~~~~~------~~h~~~v~~~~~~~~-~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 199 (281)
.+..+.... .++...+..++++|+ +.++++...++.|++|+.+.++.. ..+. ..+...
T Consensus 177 ---~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~-----------~~~~~~~~~~~ 242 (329)
T 3fvz_A 177 ---FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFV-----------REIKHASFGRN 242 (329)
T ss_dssp ---EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-----------EEECCTTTTTC
T ss_pred ---EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEE-----------EEEeccccCCC
Confidence 122221111 123345789999998 777777778899999997633211 1111 112345
Q ss_pred eEEEEeCC------Cc-eeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeE
Q 023500 200 IFSVHWSR------EG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMI 272 (281)
Q Consensus 200 v~~~~~~~------~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v 272 (281)
+..+.++| ++ .+++...+..+.+|+...... . ..+.....+...+..++++|++ .++++...++.|
T Consensus 243 ~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~-----~-~~~~~~~~~~~~p~~ia~~~dG-~lyvad~~~~~I 315 (329)
T 3fvz_A 243 VFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEI-----I-DVFKPVRKHFDMPHDIVASEDG-TVYIGDAHTNTV 315 (329)
T ss_dssp EEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCE-----E-EEECCSSSCCSSEEEEEECTTS-EEEEEESSSCCE
T ss_pred cceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeE-----E-EEEcCCCCccCCeeEEEECCCC-CEEEEECCCCEE
Confidence 56666666 22 222333455778886543211 1 1111123566778999999988 788899999999
Q ss_pred EEEEccc
Q 023500 273 KIWELAN 279 (281)
Q Consensus 273 ~iw~~~~ 279 (281)
++|++..
T Consensus 316 ~~~~~~~ 322 (329)
T 3fvz_A 316 WKFTLTE 322 (329)
T ss_dssp EEEEEEE
T ss_pred EEEeCCc
Confidence 9999754
No 161
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.74 E-value=4e-14 Score=112.88 Aligned_cols=239 Identities=12% Similarity=0.112 Sum_probs=158.2
Q ss_pred cceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeec------CCCCCeeEEEE-cCCCCEEEEecC-CCcEEEEE
Q 023500 4 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLE------GHENEVKSVSW-NASGTLLATCGR-DKSVWIWE 75 (281)
Q Consensus 4 ~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~------~h~~~v~~v~~-~~~~~~l~s~~~-d~~v~~w~ 75 (281)
.....++++|+|+++++...++.|.+|+..... +..+. +|......+++ .++++++++... ++.|.+|+
T Consensus 30 ~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~---~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d 106 (286)
T 1q7f_A 30 TEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRF---KFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 106 (286)
T ss_dssp SCEEEEEECTTCCEEEEEGGGTEEEEECTTSCE---EEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred CCCceEEECCCCCEEEEECCCCEEEEECCCCcE---EEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence 457889999999999998889999999876432 22222 34457889999 467777777643 78999998
Q ss_pred ecCCCeeEEeEeec-CCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccC
Q 023500 76 VMPGNEFECVSVLQ-GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK 154 (281)
Q Consensus 76 ~~~~~~~~~~~~~~-~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 154 (281)
..+.. +..+. .+...+..+++.|+++++++...++.|.+|+.+.. .+..+.. .++...+..++++++
T Consensus 107 -~~g~~---~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~------~~~~~~~--~~~~~~p~~i~~~~~ 174 (286)
T 1q7f_A 107 -QYGQF---VRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN------VLHKFGC--SKHLEFPNGVVVNDK 174 (286)
T ss_dssp -TTSCE---EEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC------EEEEEEC--TTTCSSEEEEEECSS
T ss_pred -CCCcE---EEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC------EEEEeCC--CCccCCcEEEEECCC
Confidence 33432 22232 33456789999999998888888899999975321 1222211 123356789999999
Q ss_pred CCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeec-ccCcceEEEEeCCCce-eeecCCCC-cEEEEecccCCCc
Q 023500 155 GDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISG-YHDRTIFSVHWSREGI-IASGAADD-SVQFFVESKDDLI 231 (281)
Q Consensus 155 ~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~~~~~~d~-~~~~~~~~~~~~~ 231 (281)
++.+++...++.|++|+.+... ...+.. .+...+..+++++++. +++...++ .+.+|+...
T Consensus 175 g~l~v~~~~~~~i~~~~~~g~~------------~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g---- 238 (286)
T 1q7f_A 175 QEIFISDNRAHCVKVFNYEGQY------------LRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG---- 238 (286)
T ss_dssp SEEEEEEGGGTEEEEEETTCCE------------EEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS----
T ss_pred CCEEEEECCCCEEEEEcCCCCE------------EEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC----
Confidence 9888887888999999864221 111111 1124567788888775 45555565 899996432
Q ss_pred CCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 232 DGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 232 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
..... +.. ......+.+++++|++. ++++. .|+.|++|++..
T Consensus 239 --~~~~~-~~~-~~~~~~~~~i~~~~~g~-l~vs~-~~~~v~v~~~~~ 280 (286)
T 1q7f_A 239 --QLISA-LES-KVKHAQCFDVALMDDGS-VVLAS-KDYRLYIYRYVQ 280 (286)
T ss_dssp --CEEEE-EEE-SSCCSCEEEEEEETTTE-EEEEE-TTTEEEEEECSC
T ss_pred --CEEEE-Ecc-cCCCCcceeEEECCCCc-EEEEC-CCCeEEEEEccc
Confidence 11111 111 12223477899999874 67664 589999999754
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.70 E-value=6e-14 Score=116.00 Aligned_cols=242 Identities=9% Similarity=0.021 Sum_probs=143.6
Q ss_pred EEEeeCC--CcEEEEec--CCCceeeeeeec-CCCCCeeEEEEcCCCCEEEEecCCCcEEEEEec-CCCeeEEeEeecCC
Q 023500 18 LATASFD--ATTCIWED--VGGDYECVATLE-GHENEVKSVSWNASGTLLATCGRDKSVWIWEVM-PGNEFECVSVLQGH 91 (281)
Q Consensus 18 l~tg~~d--~~i~lw~~--~~~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~-~~~~~~~~~~~~~~ 91 (281)
+..|+.. +.|.+|+. .++....+.... +....+..++|+|+|++|++++.+ .|.+|++. .+.. ........+
T Consensus 5 ~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~-~~~~~~~~~ 82 (365)
T 1jof_A 5 LMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEI-VHEASHPIG 82 (365)
T ss_dssp EEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEE-EEEEEEECC
T ss_pred EEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCE-EEeeEeecC
Confidence 4556653 46777764 455444333322 234567899999999999998887 99999986 4432 111111111
Q ss_pred ccceeEEEecCCCCe--EEEEe-------------cCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCC
Q 023500 92 AQDVKMVQWHPTMDV--LFSCS-------------YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD 156 (281)
Q Consensus 92 ~~~v~~v~~~p~~~~--l~s~s-------------~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 156 (281)
. ....++|+|+++. +++++ .++++.+|++..... ....+......+...+..++|+|+++
T Consensus 83 g-~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~spdG~ 157 (365)
T 1jof_A 83 G-HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGK----LEKNVQNYEYQENTGIHGMVFDPTET 157 (365)
T ss_dssp S-SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCC----EEEEEEEEECCTTCCEEEEEECTTSS
T ss_pred C-CCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCc----CcceEeeEEeCCCCcceEEEECCCCC
Confidence 2 2566899999994 44553 689999998863211 11111110012345688999999999
Q ss_pred EEEEeeC-CCcEEEEeCC-ccccccCCCCcccceeEEeec-ccCcceEEEEeCCCc-eeee-cCCCCcEEEEecccCCCc
Q 023500 157 KLVSCSD-DLTIKIWGAD-ITRMQSGDGYASWRHLCTISG-YHDRTIFSVHWSREG-IIAS-GAADDSVQFFVESKDDLI 231 (281)
Q Consensus 157 ~l~s~~~-d~~i~~w~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~-~~~~-~~~d~~~~~~~~~~~~~~ 231 (281)
+|+++.. ++.|.+|+.+ .++. ........ .+...+..+.|+|++ .++. ...++.+.+|+....
T Consensus 158 ~l~~~~~~~~~v~~~~~~~~g~~---------~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~--- 225 (365)
T 1jof_A 158 YLYSADLTANKLWTHRKLASGEV---------ELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPA--- 225 (365)
T ss_dssp EEEEEETTTTEEEEEEECTTSCE---------EEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT---
T ss_pred EEEEEcCCCCEEEEEEECCCCCE---------EEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCC---
Confidence 8877653 6789999875 2221 11111111 124557889999988 3433 345778899865321
Q ss_pred CCccce--eeeeec----cCCCC------CeeEEE-EcCCCCeeEEEeCCCC-----eEEEEEcc
Q 023500 232 DGPSYK--MLLKKE----KAHDM------DVNSVQ-WSPGERRLLASASDDG-----MIKIWELA 278 (281)
Q Consensus 232 ~~~~~~--~~~~~~----~~h~~------~v~~~~-~~~~~~~~~~s~~~Dg-----~v~iw~~~ 278 (281)
.+.... ...... .+|.. .+..++ |+|+++.++++...++ .|++|++.
T Consensus 226 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 226 THMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp TCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred CCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEEC
Confidence 111100 011111 12222 478999 9999987665543333 89999985
No 163
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.68 E-value=1.6e-14 Score=120.08 Aligned_cols=239 Identities=13% Similarity=0.056 Sum_probs=144.3
Q ss_pred eeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEE--EcCCCCEEEE-------------------
Q 023500 6 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS--WNASGTLLAT------------------- 64 (281)
Q Consensus 6 i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~--~~~~~~~l~s------------------- 64 (281)
+...+|+|||+.|+.++.++.+.+||..+++...+. ..+...+.... ++|++++++.
T Consensus 83 ~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~--~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~ 160 (388)
T 3pe7_A 83 TFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVY--QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHE 160 (388)
T ss_dssp SSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEE--ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHH
T ss_pred ccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeee--echhhcccccceeECCCCCeeccccccCcccccccccchhhh
Confidence 446789999999999999999999999887654433 33444443333 4899998874
Q ss_pred ---ecCCCcEEEEEecCCCeeEEeEeecCCccceeEEEecC-CCCeEEEEecCC------eEEEEeCCCCCCCCceeeee
Q 023500 65 ---CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP-TMDVLFSCSYDN------TIKVWWAEDTDSDNWHCVQT 134 (281)
Q Consensus 65 ---~~~d~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p-~~~~l~s~s~d~------~v~~w~~~~~~~~~~~~~~~ 134 (281)
.+.+..|.+||+..+.. ..+..+...+..+.|+| ++..|+.++.++ .|.+++.+... ...
T Consensus 161 ~~~~~~~~~l~~~d~~~g~~----~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~------~~~ 230 (388)
T 3pe7_A 161 FYFTKPCCRLMRVDLKTGES----TVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN------MRK 230 (388)
T ss_dssp HGGGCCCEEEEEEETTTCCE----EEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC------CEE
T ss_pred hhccCCcceEEEEECCCCce----EEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc------eEE
Confidence 23457889999876642 22334455688999999 999888777643 66666654321 111
Q ss_pred eeeccCCcc-ccEEEEEEccCCCEEEEeeC-CC----cEEEEeCCccccccCCCCcccceeEEeecc-c-CcceEEEEeC
Q 023500 135 ISESNNGHS-STIWALSFNAKGDKLVSCSD-DL----TIKIWGADITRMQSGDGYASWRHLCTISGY-H-DRTIFSVHWS 206 (281)
Q Consensus 135 ~~~~~~~h~-~~v~~~~~~~~~~~l~s~~~-d~----~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~v~~~~~~ 206 (281)
+.. .+. ..+....|+|+++.|+..+. ++ .|.+||++.++.. .+...... + ........|+
T Consensus 231 l~~---~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~---------~l~~~~~~~~~~~~~~~~~~s 298 (388)
T 3pe7_A 231 VKT---HAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENR---------QLTSMPACSHLMSNYDGSLMV 298 (388)
T ss_dssp SCC---CCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEE---------EEEEECCEEEEEECTTSSEEE
T ss_pred eee---CCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceE---------EEEcCCCceeeeecCCCCeEc
Confidence 211 111 35778899999997755432 22 3889988654321 11111110 0 0000011456
Q ss_pred CCceeee--c--------CCCCcEEEEecccCCCcCCccceeeeeeccCCCC-----------CeeEEEEcCCCCeeEEE
Q 023500 207 REGIIAS--G--------AADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDM-----------DVNSVQWSPGERRLLAS 265 (281)
Q Consensus 207 ~~~~~~~--~--------~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-----------~v~~~~~~~~~~~~~~s 265 (281)
|+|..+. . ..+..+.+|+..... ...+ ..|.. .+..++|+|+++.++.+
T Consensus 299 pdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~------~~~l----~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~ 368 (388)
T 3pe7_A 299 GDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGT------QHRV----ARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFT 368 (388)
T ss_dssp EEECCC------------CCCCEEEEEETTTTE------EEEE----EECCCCCCCBTTBSSTTCCCCEECTTSSEEEEE
T ss_pred cCCCcceeEeeeccccccCCCCEEEEEeccCCc------eEEe----ccccCcccccccccccCCCCccCCCCCCEEEEE
Confidence 6653222 1 345577888664321 1111 12222 46788999999887777
Q ss_pred eCCCCeEEEEEcc
Q 023500 266 ASDDGMIKIWELA 278 (281)
Q Consensus 266 ~~~Dg~v~iw~~~ 278 (281)
+..+|...||.+.
T Consensus 369 s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 369 SDVHGKPALYLAT 381 (388)
T ss_dssp ECTTSSCEEEEEE
T ss_pred ecCCCceeEEEEE
Confidence 7778888888764
No 164
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.66 E-value=9.8e-15 Score=128.06 Aligned_cols=223 Identities=9% Similarity=0.061 Sum_probs=143.9
Q ss_pred cceeEEEEcCCCCEEEEeeC---CCcEEEEecCC---CceeeeeeecCCCCCeeEEEEcCCCCE--EEEecCCCcEEEEE
Q 023500 4 RTVRSCAWSPSGKLLATASF---DATTCIWEDVG---GDYECVATLEGHENEVKSVSWNASGTL--LATCGRDKSVWIWE 75 (281)
Q Consensus 4 ~~i~~~~~~~~~~~l~tg~~---d~~i~lw~~~~---~~~~~~~~~~~h~~~v~~v~~~~~~~~--l~s~~~d~~v~~w~ 75 (281)
..+..++|+|| +++++++. +....||.... +... .+..+ ..+...+|+|+|+. +++++.| .+.+||
T Consensus 65 ~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~---~l~~~-~~~~~~~~s~dg~~~~~~s~~~~-~~~l~d 138 (582)
T 3o4h_A 65 NSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ---RLEAV-KPMRILSGVDTGEAVVFTGATED-RVALYA 138 (582)
T ss_dssp SEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE---ECTTS-CSBEEEEEEECSSCEEEEEECSS-CEEEEE
T ss_pred cccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc---cccCC-CCceeeeeCCCCCeEEEEecCCC-CceEEE
Confidence 47889999999 88887765 45567765432 2211 22222 23346688888753 4445554 455999
Q ss_pred ecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEecC----CeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEE
Q 023500 76 VMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYD----NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSF 151 (281)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d----~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 151 (281)
+..++. .... .+.. .++.|+|+++.+++++.+ ..|++|+++.... ..+ ..|...+..++|
T Consensus 139 ~~~g~~---~~l~-~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~------~~l----~~~~~~~~~~~~ 202 (582)
T 3o4h_A 139 LDGGGL---RELA-RLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL------RVF----DSGEGSFSSASI 202 (582)
T ss_dssp EETTEE---EEEE-EESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCC------EEE----CCSSCEEEEEEE
T ss_pred ccCCcE---EEee-cCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCc------eEe----ecCCCccccceE
Confidence 976542 1222 2222 789999999999988887 7899998765431 122 256677899999
Q ss_pred ccCCCEEEEeeCCC--cEEEEeCCccccccCCCCcccceeEEeecccCcceEEEE--------eCCCc-eeeecCCCCcE
Q 023500 152 NAKGDKLVSCSDDL--TIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVH--------WSREG-IIASGAADDSV 220 (281)
Q Consensus 152 ~~~~~~l~s~~~d~--~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--------~~~~~-~~~~~~~d~~~ 220 (281)
+|||+.|+++..++ .|.+||.+.++.. . ...+...+..+. |+|+| +++++..++.+
T Consensus 203 SpDG~~l~~~~~~~~~~i~~~d~~~~~~~------------~-~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~ 269 (582)
T 3o4h_A 203 SPGMKVTAGLETAREARLVTVDPRDGSVE------------D-LELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRS 269 (582)
T ss_dssp CTTSCEEEEEECSSCEEEEEECTTTCCEE------------E-CCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEE
T ss_pred CCCCCEEEEccCCCeeEEEEEcCCCCcEE------------E-ccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcE
Confidence 99999999888888 8888987654322 1 111223333333 88887 45667789999
Q ss_pred EEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCe---EEEEEc
Q 023500 221 QFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGM---IKIWEL 277 (281)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~---v~iw~~ 277 (281)
++|.+ . . ... .....+.+++|+ +++ ++++++.+.. +.+|+.
T Consensus 270 ~l~~~-g-~---------~~~---~~~~~v~~~~~s-dg~-~l~~~s~~~~p~~l~~~d~ 313 (582)
T 3o4h_A 270 AVFID-G-E---------RVE---APQGNHGRVVLW-RGK-LVTSHTSLSTPPRIVSLPS 313 (582)
T ss_dssp EEEET-T-E---------EEC---CCSSEEEEEEEE-TTE-EEEEEEETTEEEEEEEETT
T ss_pred EEEEE-C-C---------eec---cCCCceEEEEec-CCE-EEEEEcCCCCCCeEEEEcC
Confidence 99976 1 1 111 233568899999 665 5666666644 555554
No 165
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.66 E-value=4.5e-14 Score=125.61 Aligned_cols=250 Identities=10% Similarity=0.048 Sum_probs=153.1
Q ss_pred CccceeEEEEcCCCCEEEEe--eCCCcEEEEecCCCceeeeeeecCCCCCee---------EEEEc--CCCCE-EEEecC
Q 023500 2 HTRTVRSCAWSPSGKLLATA--SFDATTCIWEDVGGDYECVATLEGHENEVK---------SVSWN--ASGTL-LATCGR 67 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg--~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~---------~v~~~--~~~~~-l~s~~~ 67 (281)
|...+..++|++++-+++.. +.++...||....+. ....+..|...+. ...|+ |||++ |+.++.
T Consensus 22 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~ 99 (662)
T 3azo_A 22 RSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADG--AEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHF 99 (662)
T ss_dssp TCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTS--CEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBT
T ss_pred cCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCC--CcceeCCCCccccccccccCCccceeeeecCCCeEEEEEEC
Confidence 56788999999887777777 668889999853222 2345566666666 66665 99998 766554
Q ss_pred -CCcEEEEEec--CCCeeEEeEeecC-----CccceeEEEecCCCCeEEEEecC----------CeEEEEeCCCCCCCCc
Q 023500 68 -DKSVWIWEVM--PGNEFECVSVLQG-----HAQDVKMVQWHPTMDVLFSCSYD----------NTIKVWWAEDTDSDNW 129 (281)
Q Consensus 68 -d~~v~~w~~~--~~~~~~~~~~~~~-----~~~~v~~v~~~p~~~~l~s~s~d----------~~v~~w~~~~~~~~~~ 129 (281)
+..|.++++. .... ...+.. |...+..++|+|+++.|++++.| ..|++|+++.......
T Consensus 100 ~~~~l~~~~~~~~g~~~---~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 176 (662)
T 3azo_A 100 GDQRLYAFEPDAPGGAV---PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADR 176 (662)
T ss_dssp TTCCEEEECTTSTTCCC---CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCG
T ss_pred CCCeEEEEcCCCCCCCC---CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccC
Confidence 4555555543 1022 223344 56678899999999999988887 5899998865100000
Q ss_pred eeeeeeeeccCCccccEEEEEEccCCCEEEEeeCC--------CcEEEEeCC-ccccccCCCCcccceeEEeecccCcce
Q 023500 130 HCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDD--------LTIKIWGAD-ITRMQSGDGYASWRHLCTISGYHDRTI 200 (281)
Q Consensus 130 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d--------~~i~~w~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v 200 (281)
.....+. ..+...+..++|+|||+.|+..+.+ ..|.+||++ .+.. .....+...+...+
T Consensus 177 ~~~~~l~---~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~---------~~~~~l~~~~~~~~ 244 (662)
T 3azo_A 177 SAVRELS---DDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRF---------ADTRTLLGGPEEAI 244 (662)
T ss_dssp GGSEESS---CSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCE---------EEEEEEEEETTBCE
T ss_pred CceeEEE---ecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcc---------cccEEeCCCCCceE
Confidence 0011111 0233567788999999999877754 368888875 2210 11122222345678
Q ss_pred EEEEeCCCc-eeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCC--------CeeEEEEcCCCCeeEEEeCCCCe
Q 023500 201 FSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDM--------DVNSVQWSPGERRLLASASDDGM 271 (281)
Q Consensus 201 ~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~--------~v~~~~~~~~~~~~~~s~~~Dg~ 271 (281)
..+.|+|+| +++++..++..++|..... .+. ...+. ..+.. .+..++|+|+++ ++++++. +.
T Consensus 245 ~~~~~spdg~l~~~~~~~~~~~l~~~~~~---~~~-~~~l~---~~~~~~~~p~w~~~~~~~~~~~~~~-~~~~~~~-~~ 315 (662)
T 3azo_A 245 AQAEWAPDGSLIVATDRTGWWNLHRVDPA---TGA-ATQLC---RREEEFAGPLWTPGMRWFAPLANGL-IAVVHGK-GA 315 (662)
T ss_dssp EEEEECTTSCEEEEECTTSSCEEEEECTT---TCC-EEESS---CCSSBSSCCCCSTTCCSEEECTTSC-EEEEEBS-SS
T ss_pred cceEECCCCeEEEEECCCCCeEEEEEECC---CCc-eeecc---cccccccCccccccCceEeEeCCCE-EEEEEEc-Cc
Confidence 889999887 4555666775555544211 111 01111 11111 156788988765 6778888 99
Q ss_pred EEEEEc
Q 023500 272 IKIWEL 277 (281)
Q Consensus 272 v~iw~~ 277 (281)
++||.+
T Consensus 316 ~~l~~~ 321 (662)
T 3azo_A 316 AVLGIL 321 (662)
T ss_dssp CEEEEE
T ss_pred cEEEEE
Confidence 999954
No 166
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.65 E-value=4.3e-14 Score=126.53 Aligned_cols=247 Identities=11% Similarity=0.050 Sum_probs=150.5
Q ss_pred cceeEEEEcCCCCEEE-----EeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCc--------
Q 023500 4 RTVRSCAWSPSGKLLA-----TASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKS-------- 70 (281)
Q Consensus 4 ~~i~~~~~~~~~~~l~-----tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~-------- 70 (281)
..+..++|||||++|| .|+.+..|++||..+++......+... ....++|+|||+.|+.++.|..
T Consensus 121 ~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~--~~~~~~wspDg~~l~~~~~d~~~~~~~~~~ 198 (695)
T 2bkl_A 121 VSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGG--KYATPKWTPDSKGFYYEWLPTDPSIKVDER 198 (695)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCC--TTCCCEECTTSSEEEEEECCCCTTSCGGGG
T ss_pred EEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcc--cccceEEecCCCEEEEEEecCCCCCccccC
Confidence 3578899999999998 555567899999988764201111111 1267899999999999988776
Q ss_pred -----EEEEEecCCCe-eEEeEeecCCccceeEEEecCCCCeEEEEecCC----eEEEEeCCCCCCCCceeeeeeeeccC
Q 023500 71 -----VWIWEVMPGNE-FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN----TIKVWWAEDTDSDNWHCVQTISESNN 140 (281)
Q Consensus 71 -----v~~w~~~~~~~-~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~----~v~~w~~~~~~~~~~~~~~~~~~~~~ 140 (281)
|++|++..+.. ...+.....|...+..+.|+|++++|+.++.++ .|.+|+.... .. ..+..
T Consensus 199 ~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~---~~---~~l~~--- 269 (695)
T 2bkl_A 199 PGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEK---DF---RLLVK--- 269 (695)
T ss_dssp GGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCS---SC---EEEEE---
T ss_pred CCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCC---ce---EEeec---
Confidence 99999875542 123333344556788999999999888777665 5555533211 11 22221
Q ss_pred CccccEEEEEEccCCCEEEEee---CCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecCCC
Q 023500 141 GHSSTIWALSFNAKGDKLVSCS---DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAAD 217 (281)
Q Consensus 141 ~h~~~v~~~~~~~~~~~l~s~~---~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d 217 (281)
+...+....+ +++..++... .++.|.+|+.+..... .|+.+ ........+..+.++.+.++++...|
T Consensus 270 -~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~------~~~~l--~~~~~~~~l~~~~~~~~~lv~~~~~d 339 (695)
T 2bkl_A 270 -GVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARA------SWKEI--VPEDSSASLLSVSIVGGHLSLEYLKD 339 (695)
T ss_dssp -CSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGG------GCEEE--ECCCSSCEEEEEEEETTEEEEEEEET
T ss_pred -CCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCcc------CCeEE--ecCCCCCeEEEEEEECCEEEEEEEEC
Confidence 2223344445 5666444433 2578888887543210 11111 11111445677778766678888889
Q ss_pred CcEEEEecccCCCcCCccceeeeeeccCC-CCCeeEEEEcCCCCeeEEEeC---CCCeEEEEEccc
Q 023500 218 DSVQFFVESKDDLIDGPSYKMLLKKEKAH-DMDVNSVQWSPGERRLLASAS---DDGMIKIWELAN 279 (281)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~~s~~---~Dg~v~iw~~~~ 279 (281)
+..++|..... +. . ......+ ...+..++++|++..++++.+ .++.|++||+..
T Consensus 340 g~~~l~~~~~~----g~---~-~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~ 397 (695)
T 2bkl_A 340 ATSEVRVATLK----GK---P-VRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVST 397 (695)
T ss_dssp TEEEEEEEETT----CC---E-EEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTT
T ss_pred CEEEEEEEeCC----CC---e-eEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 98888866421 11 1 1111222 455777889998766554433 357899999754
No 167
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.65 E-value=5.2e-14 Score=114.38 Aligned_cols=202 Identities=12% Similarity=0.131 Sum_probs=132.7
Q ss_pred ceeEEEEcCCCCEE-EEeeCCCcEEEEecCCCceeeeeeecC---CCCCeeEEEEcCCCCEEEEec------------CC
Q 023500 5 TVRSCAWSPSGKLL-ATASFDATTCIWEDVGGDYECVATLEG---HENEVKSVSWNASGTLLATCG------------RD 68 (281)
Q Consensus 5 ~i~~~~~~~~~~~l-~tg~~d~~i~lw~~~~~~~~~~~~~~~---h~~~v~~v~~~~~~~~l~s~~------------~d 68 (281)
.+..++|+|+|+++ ++++.++.|.+||..+++......... |...+.+++|+|+|++|++++ .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 47789999999765 566677899999987765422222211 122677899999999988886 67
Q ss_pred CcEEEEEecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCC------C--c--------eee
Q 023500 69 KSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD------N--W--------HCV 132 (281)
Q Consensus 69 ~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~------~--~--------~~~ 132 (281)
+.|.+||+..... ...+.. ...+..+.|+|+++.++++ ++.|++|++...... . . +.+
T Consensus 115 ~~i~v~d~~~~~~---~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l 188 (337)
T 1pby_B 115 TRVALYDAETLSR---RKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAV 188 (337)
T ss_dssp CEEEEEETTTTEE---EEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCC
T ss_pred ceEEEEECCCCcE---EEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEE
Confidence 9999999865432 223322 3457889999999988877 689999998643110 0 0 000
Q ss_pred --------------------------------eeeeec---------cCCccccEEEEEEccCCCEEEEeeCCCcEEEEe
Q 023500 133 --------------------------------QTISES---------NNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWG 171 (281)
Q Consensus 133 --------------------------------~~~~~~---------~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~w~ 171 (281)
..+... ...+...+..++|+|++++++++ ++.|.+||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d 266 (337)
T 1pby_B 189 WNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFD 266 (337)
T ss_dssp CCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEE
T ss_pred eeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEE
Confidence 000000 00122345679999999998888 78999999
Q ss_pred CCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEEeccc
Q 023500 172 ADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESK 227 (281)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~ 227 (281)
.+..+. ...+. ....+.++.+++++ .+++++.++.+.+|+...
T Consensus 267 ~~~~~~-----------~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~ 310 (337)
T 1pby_B 267 LEKNAS-----------IKRVP--LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAET 310 (337)
T ss_dssp TTTTEE-----------EEEEE--CSSCCCEEEECTTSCEEEEESBSSEEEEEETTT
T ss_pred CCCCcC-----------cceec--CCCceeeEEECCCCCEEEEEcCCCcEEEEECcC
Confidence 764321 11221 23456788899876 466667789999997654
No 168
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.64 E-value=6.7e-13 Score=106.37 Aligned_cols=231 Identities=13% Similarity=0.110 Sum_probs=147.6
Q ss_pred ceeEEEEcCCCC-EEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeE
Q 023500 5 TVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFE 83 (281)
Q Consensus 5 ~i~~~~~~~~~~-~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~ 83 (281)
....++|+|+|+ +++++..++.|..|+..++ . ..+..+...+.+++++|+|+++++...++.|.+||...+....
T Consensus 29 ~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~---~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~ 104 (296)
T 3e5z_A 29 WTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L---SPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWES 104 (296)
T ss_dssp SEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-E---EEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEE
T ss_pred cccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-e---EEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEE
Confidence 456789999998 7888888999999998765 3 3444567789999999999998888888899999986554221
Q ss_pred EeEeecCC-ccceeEEEecCCCCeEEEEec-----------------CCeEEEEeCCCCCCCCceeeeeeeeccCCcccc
Q 023500 84 CVSVLQGH-AQDVKMVQWHPTMDVLFSCSY-----------------DNTIKVWWAEDTDSDNWHCVQTISESNNGHSST 145 (281)
Q Consensus 84 ~~~~~~~~-~~~v~~v~~~p~~~~l~s~s~-----------------d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~ 145 (281)
......+. ...++.+++.|+++++++.+. .+.|..++.. . . ...+. .+...
T Consensus 105 ~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g---~---~~~~~----~~~~~ 173 (296)
T 3e5z_A 105 IADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G---T---LSAPI----RDRVK 173 (296)
T ss_dssp EECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S---C---EEEEE----CCCSS
T ss_pred EeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-C---C---EEEee----cCCCC
Confidence 11111111 234678999999998887321 2344444322 1 1 11111 23355
Q ss_pred EEEEEEccCCCEEEEeeCCCcEEEEeCCc-cccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecCCCCcEEEEe
Q 023500 146 IWALSFNAKGDKLVSCSDDLTIKIWGADI-TRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFV 224 (281)
Q Consensus 146 v~~~~~~~~~~~l~s~~~d~~i~~w~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~~~~~~ 224 (281)
+..++|+|+++.|++.+.++.|.+|+.+. +... .....+ ......+..+.++++|.+..+. ++.+.+|+
T Consensus 174 ~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~--------~~~~~~-~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~ 243 (296)
T 3e5z_A 174 PNGLAFLPSGNLLVSDTGDNATHRYCLNARGETE--------YQGVHF-TVEPGKTDGLRVDAGGLIWASA-GDGVHVLT 243 (296)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEEEECSSSCEE--------EEEEEE-CCSSSCCCSEEEBTTSCEEEEE-TTEEEEEC
T ss_pred CccEEECCCCCEEEEeCCCCeEEEEEECCCCcCc--------CCCeEe-eCCCCCCCeEEECCCCCEEEEc-CCeEEEEC
Confidence 68899999999887777888999998751 1110 001111 1233445567888888665555 77888886
Q ss_pred cccCCCcCCccceeeeeeccCCCCCeeEEEE-cCCCCeeEEEeCCCCeE
Q 023500 225 ESKDDLIDGPSYKMLLKKEKAHDMDVNSVQW-SPGERRLLASASDDGMI 272 (281)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~~~~~s~~~Dg~v 272 (281)
... . .......+.. +++++| .|+++.++++ +.++..
T Consensus 244 ~~g------~----~~~~~~~~~~-~~~~~f~~~d~~~L~v~-t~~~l~ 280 (296)
T 3e5z_A 244 PDG------D----ELGRVLTPQT-TSNLCFGGPEGRTLYMT-VSTEFW 280 (296)
T ss_dssp TTS------C----EEEEEECSSC-CCEEEEESTTSCEEEEE-ETTEEE
T ss_pred CCC------C----EEEEEECCCC-ceeEEEECCCCCEEEEE-cCCeEE
Confidence 532 1 1222234445 889999 5777666544 445433
No 169
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.64 E-value=5.8e-13 Score=119.56 Aligned_cols=247 Identities=11% Similarity=0.037 Sum_probs=152.4
Q ss_pred ceeEEEEcCCCCEEEEeeCCC-----cEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCc---------
Q 023500 5 TVRSCAWSPSGKLLATASFDA-----TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKS--------- 70 (281)
Q Consensus 5 ~i~~~~~~~~~~~l~tg~~d~-----~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~--------- 70 (281)
.+..++|+|||++||.++.++ .|.+||..+++.... .+. + ..+..++|+|||+.|+.++.++.
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~-~~~-~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~ 202 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPD-VLE-R-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTET 202 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEE-EEE-E-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcc-ccc-C-cccceEEEEeCCCEEEEEEECCcccccccccc
Confidence 477899999999998766543 899999988764322 222 1 23668999999999998887766
Q ss_pred -------EEEEEecCCCee-EEeEeecCCccceeEEEecCCCCeEEEEec-----CCeEEEEeCCC------CCCCCcee
Q 023500 71 -------VWIWEVMPGNEF-ECVSVLQGHAQDVKMVQWHPTMDVLFSCSY-----DNTIKVWWAED------TDSDNWHC 131 (281)
Q Consensus 71 -------v~~w~~~~~~~~-~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~-----d~~v~~w~~~~------~~~~~~~~ 131 (281)
|++|++..+... ..+.....|...+..+.|+|++++|+.++. +..|++|++.. ... .
T Consensus 203 ~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~-~--- 278 (710)
T 2xdw_A 203 STNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL-K--- 278 (710)
T ss_dssp CCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC-C---
T ss_pred ccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc-c---
Confidence 999998655421 122222334555788999999998887765 56899998764 210 1
Q ss_pred eeeeeeccCCccccEEEEEEccCCCEEEEeeCC----CcEEEEeCCccccccCCCCcccceeEEeecccC-cceEEEEeC
Q 023500 132 VQTISESNNGHSSTIWALSFNAKGDKLVSCSDD----LTIKIWGADITRMQSGDGYASWRHLCTISGYHD-RTIFSVHWS 206 (281)
Q Consensus 132 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d----~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~ 206 (281)
...+. .+...+.. .|+|+++.|+..+.. ..|.+|+.+..... .++.+ ..... ..+..+.++
T Consensus 279 ~~~l~----~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~------~~~~l---~~~~~~~~~~~~~~~ 344 (710)
T 2xdw_A 279 WVKLI----DNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEES------KWKVL---VPEHEKDVLEWVACV 344 (710)
T ss_dssp CEEEE----CSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGG------GCEEE---ECCCSSCEEEEEEEE
T ss_pred eEEee----CCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcc------cceec---cCCCCCCeEEEEEEE
Confidence 12222 22233333 478888877666543 25778876533210 11211 11122 356677887
Q ss_pred CC-ceeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeC---CCCeEEEEEccc
Q 023500 207 RE-GIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASAS---DDGMIKIWELAN 279 (281)
Q Consensus 207 ~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~---~Dg~v~iw~~~~ 279 (281)
++ .++++...++..++|..... .+.. ......+...+..++++|++..++++.+ ..+.|.+||+..
T Consensus 345 ~~~~lv~~~~~~g~~~l~~~~~~---~g~~----~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 414 (710)
T 2xdw_A 345 RSNFLVLCYLHDVKNTLQLHDLA---TGAL----LKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTK 414 (710)
T ss_dssp TTTEEEEEEEETTEEEEEEEETT---TCCE----EEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTS
T ss_pred cCCEEEEEEEECCEEEEEEEECC---CCCE----EEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCC
Confidence 44 46677777876666644310 1111 1122334566888999998866654433 357899999754
No 170
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.64 E-value=6.1e-14 Score=114.60 Aligned_cols=197 Identities=8% Similarity=0.062 Sum_probs=129.6
Q ss_pred ceeEEEEcCCCCEE-EEeeCCCcEEEEecCCCceeeeeeec-CC-----CCCeeEEEEcCCCCEEEEecCC---------
Q 023500 5 TVRSCAWSPSGKLL-ATASFDATTCIWEDVGGDYECVATLE-GH-----ENEVKSVSWNASGTLLATCGRD--------- 68 (281)
Q Consensus 5 ~i~~~~~~~~~~~l-~tg~~d~~i~lw~~~~~~~~~~~~~~-~h-----~~~v~~v~~~~~~~~l~s~~~d--------- 68 (281)
.+..++|+|+|+++ +++..++.|.+||..+++. +..+. ++ ...+.+++|+|+|++|++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~--~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 121 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN--TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYV 121 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE--EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcE--EEEEEcccccccccccccceEECCCCCEEEEEcccccccccccc
Confidence 46789999999854 5666789999999877653 33333 22 2347889999999999988865
Q ss_pred ---CcEEEEEecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeecc------
Q 023500 69 ---KSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESN------ 139 (281)
Q Consensus 69 ---~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~------ 139 (281)
+.|.+||+..+.....+..... ...+.+++|+|++. ++.++ +.|++|+...... ...+....
T Consensus 122 ~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~-----~~~~~~~~~~~~~~ 192 (349)
T 1jmx_B 122 VKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKY-----TVALPLRNWNRKGY 192 (349)
T ss_dssp ECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECTTSC-EEEES--SSEEEECTTTCCE-----EEEECSTTCCCTTB
T ss_pred cCCCeEEEEECCCccccceeeeccC-CCcccceeECCCCc-EEEcc--CcEEEEeCCCCce-----eccccccccCCccc
Confidence 8999999876432222233332 33588999999999 55544 3499998765321 11110000
Q ss_pred ----------------------------------------------------------CCccccEEEEEEcc-CCCEEEE
Q 023500 140 ----------------------------------------------------------NGHSSTIWALSFNA-KGDKLVS 160 (281)
Q Consensus 140 ----------------------------------------------------------~~h~~~v~~~~~~~-~~~~l~s 160 (281)
..+...+..++|+| +++++++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~ 272 (349)
T 1jmx_B 193 SAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYG 272 (349)
T ss_dssp CCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEE
T ss_pred cCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEE
Confidence 00112456778889 9998888
Q ss_pred eeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEEeccc
Q 023500 161 CSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESK 227 (281)
Q Consensus 161 ~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~ 227 (281)
+ ++.|.+||.+..+. ...+. ....+..+.+++++ .+++++.++.+.+|+...
T Consensus 273 ~--~~~v~~~d~~~~~~-----------~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 273 V--LNRLAKYDLKQRKL-----------IKAAN--LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDT 325 (349)
T ss_dssp E--ESEEEEEETTTTEE-----------EEEEE--CSSCCCEEEECSSSSCEEEESBSSEEEEEETTT
T ss_pred E--cCeEEEEECccCeE-----------EEEEc--CCCCccceEECCCCCEEEEecCCCeEEEEeccc
Confidence 8 88999999864321 11111 22345678899875 566677789999997643
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.62 E-value=9.1e-14 Score=123.66 Aligned_cols=158 Identities=9% Similarity=-0.017 Sum_probs=110.5
Q ss_pred CccceeEEEEcCCCCEEEEeeCC----------CcEEEEecCC------Cceeeeeeec-CCCCCeeEEEEcCCCCEEEE
Q 023500 2 HTRTVRSCAWSPSGKLLATASFD----------ATTCIWEDVG------GDYECVATLE-GHENEVKSVSWNASGTLLAT 64 (281)
Q Consensus 2 h~~~i~~~~~~~~~~~l~tg~~d----------~~i~lw~~~~------~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s 64 (281)
|...+..++|+|||+.|+.++.| ..|.+|+..+ +.. ..+. .+...+..++|+|||++|+.
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~l~~~~~~~~~~~~~SpDG~~la~ 204 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV---RELSDDAHRFVTGPRLSPDGRQAVW 204 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS---EESSCSCSSEECCCEECTTSSEEEE
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce---eEEEecCCCcccCceECCCCCEEEE
Confidence 45567899999999999988877 5799999876 432 3344 55677888999999999987
Q ss_pred ecCC--------CcEEEEEec-CCCeeEEeEeecCCccceeEEEecCCCCeEEEEecCCe--EEEEeCCCCCCCCceeee
Q 023500 65 CGRD--------KSVWIWEVM-PGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT--IKVWWAEDTDSDNWHCVQ 133 (281)
Q Consensus 65 ~~~d--------~~v~~w~~~-~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~--v~~w~~~~~~~~~~~~~~ 133 (281)
++.+ ..|++||+. .+..........+|...+..+.|+|++++++++..++. |.+|+.+... . .
T Consensus 205 ~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~---~---~ 278 (662)
T 3azo_A 205 LAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGA---A---T 278 (662)
T ss_dssp EEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCC---E---E
T ss_pred EECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCc---e---e
Confidence 7754 379999997 34211223333445677899999999998888888884 4444432221 1 1
Q ss_pred eeeeccCCcccc--------EEEEEEccCCCEEEEeeCCCcEEEEeC
Q 023500 134 TISESNNGHSST--------IWALSFNAKGDKLVSCSDDLTIKIWGA 172 (281)
Q Consensus 134 ~~~~~~~~h~~~--------v~~~~~~~~~~~l~s~~~d~~i~~w~~ 172 (281)
.+.. .+... +..++|+|++.+++++.. +.+++|.+
T Consensus 279 ~l~~---~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~ 321 (662)
T 3azo_A 279 QLCR---REEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGIL 321 (662)
T ss_dssp ESSC---CSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEE
T ss_pred eccc---ccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEE
Confidence 1111 11111 456889999999999988 99999944
No 172
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.62 E-value=1.2e-13 Score=114.83 Aligned_cols=237 Identities=10% Similarity=0.033 Sum_probs=141.2
Q ss_pred EEEcCCCCEEEEeeC-CCc--EEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEEe
Q 023500 9 CAWSPSGKLLATASF-DAT--TCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECV 85 (281)
Q Consensus 9 ~~~~~~~~~l~tg~~-d~~--i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~ 85 (281)
.+|+|||++|+.++. ++. |.+||..+++. .....++...+..+.|+|+|++|+.++.++.|++||+..++..
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~--~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~--- 115 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVA--TQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEEN--- 115 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEE--EECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEE---
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCce--EEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcce---
Confidence 679999999988887 664 77778777653 3333455556667889999999999999999999999766532
Q ss_pred EeecCCccceeEEE--ecCCCCeEEEE----------------------ecCCeEEEEeCCCCCCCCceeeeeeeeccCC
Q 023500 86 SVLQGHAQDVKMVQ--WHPTMDVLFSC----------------------SYDNTIKVWWAEDTDSDNWHCVQTISESNNG 141 (281)
Q Consensus 86 ~~~~~~~~~v~~v~--~~p~~~~l~s~----------------------s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~ 141 (281)
.....+...+.... ++|++..++.. ..+..|.+|++.... ...+. .
T Consensus 116 ~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~------~~~l~----~ 185 (388)
T 3pe7_A 116 VVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE------STVIL----Q 185 (388)
T ss_dssp EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC------EEEEE----E
T ss_pred eeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc------eEEee----c
Confidence 22333333343333 48998887642 234678888876542 12222 2
Q ss_pred ccccEEEEEEcc-CCCEEEEeeCCC------cEEEEeCCccccccCCCCcccceeEEeecccC-cceEEEEeCCCce-ee
Q 023500 142 HSSTIWALSFNA-KGDKLVSCSDDL------TIKIWGADITRMQSGDGYASWRHLCTISGYHD-RTIFSVHWSREGI-IA 212 (281)
Q Consensus 142 h~~~v~~~~~~~-~~~~l~s~~~d~------~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~-~~ 212 (281)
+...+..+.|+| +++.|+.+..++ .|.+++.+..... .+..... ..+....|+|+|. ++
T Consensus 186 ~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~------------~l~~~~~~~~~~~~~~spdg~~l~ 253 (388)
T 3pe7_A 186 ENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR------------KVKTHAEGESCTHEFWVPDGSALV 253 (388)
T ss_dssp ESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE------------ESCCCCTTEEEEEEEECTTSSCEE
T ss_pred CCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE------------EeeeCCCCcccccceECCCCCEEE
Confidence 345678899999 998888776532 5666665432211 1111111 2466778999874 32
Q ss_pred e-cCC-C---CcEEEEecccCCCcCCccceeeeeeccCCC---CCeeEEEEcCCCCeeEEEe--------CCCCeEEEEE
Q 023500 213 S-GAA-D---DSVQFFVESKDDLIDGPSYKMLLKKEKAHD---MDVNSVQWSPGERRLLASA--------SDDGMIKIWE 276 (281)
Q Consensus 213 ~-~~~-d---~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~---~~v~~~~~~~~~~~~~~s~--------~~Dg~v~iw~ 276 (281)
. ... + ..+.+|+...... .. +.....+. .....+.|+|+++.++++. ..+..|++||
T Consensus 254 ~~~~~~~~~~~~l~~~d~~~g~~------~~-l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d 326 (388)
T 3pe7_A 254 YVSYLKGSPDRFIYSADPETLEN------RQ-LTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFN 326 (388)
T ss_dssp EEEEETTCCCEEEEEECTTTCCE------EE-EEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEE
T ss_pred EEecCCCCCcceEEEEecCCCce------EE-EEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEe
Confidence 2 222 1 2377886643211 11 11111100 0012247999988765443 4567899999
Q ss_pred ccc
Q 023500 277 LAN 279 (281)
Q Consensus 277 ~~~ 279 (281)
+..
T Consensus 327 ~~~ 329 (388)
T 3pe7_A 327 MKN 329 (388)
T ss_dssp TTT
T ss_pred ccC
Confidence 764
No 173
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.61 E-value=5.9e-13 Score=108.95 Aligned_cols=221 Identities=12% Similarity=0.174 Sum_probs=136.2
Q ss_pred ceeEEEEcCCCCEEEEeeCC---Cc--EEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCC-----------
Q 023500 5 TVRSCAWSPSGKLLATASFD---AT--TCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRD----------- 68 (281)
Q Consensus 5 ~i~~~~~~~~~~~l~tg~~d---~~--i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d----------- 68 (281)
.+..++|+|||+.||..+.+ +. |.+|+..+++...+.. +.. +..++|+|+|+.|+.++.+
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~---~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~ 135 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILE---AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFED 135 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEE---ESE-EEEEEECTTSSEEEEEEECCCC--------
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEc---CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEc
Confidence 36678999999999887754 33 6677776664333322 233 8999999999988877632
Q ss_pred ----------------CcEEEEEecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEecCC-------eEEEEeCCCCC
Q 023500 69 ----------------KSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN-------TIKVWWAEDTD 125 (281)
Q Consensus 69 ----------------~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~-------~v~~w~~~~~~ 125 (281)
..|.+|++..+.. +..+.. . .+..+.|+|++ ++++++.+. ...+|.+. ..
T Consensus 136 ~~~~~~~g~~~~~~~~~~l~~~d~~~~~~---~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d-~~ 208 (347)
T 2gop_A 136 DVPAWFDDLGFFDGEKTTFWIFDTESEEV---IEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE-DG 208 (347)
T ss_dssp -CCCC---------CEEEEEEEETTTTEE---EEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE-TT
T ss_pred ccceeecCcccccCccceEEEEECCCCeE---EeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC-CC
Confidence 5688888865432 122222 2 68899999999 777776652 44555444 11
Q ss_pred CCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeCC--------CcEEEEeCCccccccCCCCcccceeEEeecccC
Q 023500 126 SDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDD--------LTIKIWGADITRMQSGDGYASWRHLCTISGYHD 197 (281)
Q Consensus 126 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d--------~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (281)
....+.. + ..+..+ +|+++.|+.++.+ ..|.+|| . ++. ..+...+.
T Consensus 209 -----~~~~l~~----~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d-~-~~~------------~~l~~~~~ 262 (347)
T 2gop_A 209 -----KEEKMFE----K-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD-G-KEV------------MGILDEVD 262 (347)
T ss_dssp -----EEEEEEE----E-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC-S-SCE------------EESSTTCC
T ss_pred -----ceEEecc----C-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC-C-Cce------------EeccccCC
Confidence 1122221 2 334333 8999988777644 3566666 2 111 11111234
Q ss_pred cceEE-EEeCCCceeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeE-EEE
Q 023500 198 RTIFS-VHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMI-KIW 275 (281)
Q Consensus 198 ~~v~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v-~iw 275 (281)
..+.. +.|+ +++++++..++..++| ... . .. ..+ ..+...|.+++|+| . ++++++.++.. +||
T Consensus 263 ~~~~~~~~~s-dg~~~~~~~~~~~~l~-~~~-g----~~-~~~----~~~~~~v~~~~~s~--~-~~~~~~~~~~~~~l~ 327 (347)
T 2gop_A 263 RGVGQAKIKD-GKVYFTLFEEGSVNLY-IWD-G----EI-KPI----AKGRHWIMGFDVDE--I-VVYLKETATRLRELF 327 (347)
T ss_dssp SEEEEEEEET-TEEEEEEEETTEEEEE-EES-S----SE-EEE----ECSSSEEEEEEESS--S-EEEEEECSSSCCEEE
T ss_pred cccCCccEEc-CcEEEEEecCCcEEEE-EcC-C----ce-EEE----ecCCCeEEeeeeeC--c-EEEEEcCCCChHHhe
Confidence 55664 7888 7777788888999999 752 1 11 111 23456789999998 3 55666666654 777
Q ss_pred Ec
Q 023500 276 EL 277 (281)
Q Consensus 276 ~~ 277 (281)
.+
T Consensus 328 ~~ 329 (347)
T 2gop_A 328 TW 329 (347)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 174
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.59 E-value=2.1e-13 Score=123.01 Aligned_cols=160 Identities=14% Similarity=0.167 Sum_probs=106.0
Q ss_pred EEEEcCCCCEEEEeeCC---------CcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecC
Q 023500 8 SCAWSPSGKLLATASFD---------ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMP 78 (281)
Q Consensus 8 ~~~~~~~~~~l~tg~~d---------~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~ 78 (281)
.++|||||++|+.++.+ +.+.+||..+++. ..+..|.+.+...+|||||++|+.++ |+.|.+|++..
T Consensus 66 ~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~---~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~ 141 (740)
T 4a5s_A 66 DYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQL---ITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPN 141 (740)
T ss_dssp EEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE---CCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTT
T ss_pred ceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcE---EEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCC
Confidence 47899999999998876 5567999988753 34566788899999999999998885 68999999876
Q ss_pred CCeeEEeEeecCCcc-----------------ceeEEEecCCCCeEEEEecCCe--------------------------
Q 023500 79 GNEFECVSVLQGHAQ-----------------DVKMVQWHPTMDVLFSCSYDNT-------------------------- 115 (281)
Q Consensus 79 ~~~~~~~~~~~~~~~-----------------~v~~v~~~p~~~~l~s~s~d~~-------------------------- 115 (281)
+.... + +..++.. ....+.|+|+++.|+.++.|.+
T Consensus 142 ~~~~~-l-t~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp 219 (740)
T 4a5s_A 142 LPSYR-I-TWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYP 219 (740)
T ss_dssp SCCEE-C-CSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECC
T ss_pred CceEE-E-cCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCC
Confidence 54321 1 1122221 1235899999999988765433
Q ss_pred ----------EEEEeCCC---CCCCCceeeeeeeec--cCCccccEEEEEEccCCCEEEEee----CCCcEEEEeCCccc
Q 023500 116 ----------IKVWWAED---TDSDNWHCVQTISES--NNGHSSTIWALSFNAKGDKLVSCS----DDLTIKIWGADITR 176 (281)
Q Consensus 116 ----------v~~w~~~~---~~~~~~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~----~d~~i~~w~~~~~~ 176 (281)
|++|+++. .... ....+... ..+|...+..++|+|+++.++... .+..|.+||.+.++
T Consensus 220 ~~G~~~~~~~l~v~d~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 220 KAGAVNPTVKFFVVNTDSLSSVTNA---TSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp BTTSCCCEEEEEEEETTSCCSSSCC---CEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred CCcCcCCeeEEEEEECCCCCCCCcc---eEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 44555443 2100 01111100 013667788999999998665543 23468889876543
No 175
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.59 E-value=4.6e-12 Score=99.88 Aligned_cols=238 Identities=8% Similarity=-0.013 Sum_probs=153.9
Q ss_pred ceeEEEEcCCCCEEE-EeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeE
Q 023500 5 TVRSCAWSPSGKLLA-TASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFE 83 (281)
Q Consensus 5 ~i~~~~~~~~~~~l~-tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~ 83 (281)
....++++++|++++ +...++.|.+|+..+..... ....+...+.+++++|+|+++++.. ++.|.+|+......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-- 99 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTV--LPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-- 99 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EE--CCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC--
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccce--EeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE--
Confidence 567899999999888 55778899999865543211 1122335678899999999777766 88999998653321
Q ss_pred EeEeec-CCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEee
Q 023500 84 CVSVLQ-GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS 162 (281)
Q Consensus 84 ~~~~~~-~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 162 (281)
..+. ........+.+.|++.++++...++.|.+|+..... ... . .......+..+++++++..+++..
T Consensus 100 --~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~-----~~~-~---~~~~~~~p~~i~~~~~g~l~v~~~ 168 (270)
T 1rwi_B 100 --TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKT-----QTV-L---PFTGLNDPDGVAVDNSGNVYVTDT 168 (270)
T ss_dssp --EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCS-----CEE-C---CCCSCCSCCCEEECTTCCEEEEEG
T ss_pred --eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCce-----eEe-e---ccccCCCceeEEEeCCCCEEEEEC
Confidence 1121 223567899999999988887788999998543221 011 0 011223467899999998777777
Q ss_pred CCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCce-eeecCCCCcEEEEecccCCCcCCccceeeee
Q 023500 163 DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSVQFFVESKDDLIDGPSYKMLLK 241 (281)
Q Consensus 163 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 241 (281)
.++.|..|+.+...... ........+..+.+++++. +++...++.+..|+...... ..
T Consensus 169 ~~~~i~~~~~~~~~~~~------------~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~---------~~ 227 (270)
T 1rwi_B 169 DNNRVVKLEAESNNQVV------------LPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS---------TV 227 (270)
T ss_dssp GGTEEEEECTTTCCEEE------------CCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC---------EE
T ss_pred CCCEEEEEecCCCceEe------------ecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc---------ee
Confidence 78899999875332110 0001114466788888764 55555677888886543210 11
Q ss_pred eccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEcccC
Q 023500 242 KEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANT 280 (281)
Q Consensus 242 ~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~~ 280 (281)
....+...+.++++++++. ++++...++.|+++++..+
T Consensus 228 ~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 228 LPFTGLNTPLAVAVDSDRT-VYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp CCCCSCSCEEEEEECTTCC-EEEEEGGGTEEEEECCCGG
T ss_pred eccCCCCCceeEEECCCCC-EEEEECCCCEEEEEcCCCc
Confidence 1112335688999999875 7888888999999987643
No 176
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.57 E-value=2.7e-11 Score=98.50 Aligned_cols=241 Identities=10% Similarity=0.057 Sum_probs=145.1
Q ss_pred cceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCC----CcEEEEEecCC
Q 023500 4 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRD----KSVWIWEVMPG 79 (281)
Q Consensus 4 ~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d----~~v~~w~~~~~ 79 (281)
..+..++|+|+|++++++..++.|.+||..+++.... ...+...+.+++++|+|+++++...+ +.|.+||....
T Consensus 45 ~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~--~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~ 122 (333)
T 2dg1_A 45 LQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRP--FVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGD 122 (333)
T ss_dssp CCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEE--EECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSC
T ss_pred ccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEE--eeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCC
Confidence 4467899999999888888899999999877654322 22456789999999999988887766 68999987644
Q ss_pred CeeEEeEeecCCccceeEEEecCCCCeEEEEec------CCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEcc
Q 023500 80 NEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY------DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNA 153 (281)
Q Consensus 80 ~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~------d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 153 (281)
.... ......+...+..+.++|++.++++... .+.|..++.+... ...+.. +...+..++|+|
T Consensus 123 ~~~~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~------~~~~~~----~~~~~~~i~~~~ 191 (333)
T 2dg1_A 123 NLQD-IIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT------VTPIIQ----NISVANGIALST 191 (333)
T ss_dssp SCEE-EECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC------EEEEEE----EESSEEEEEECT
T ss_pred EEEE-EEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCE------EEEeec----CCCcccceEECC
Confidence 3211 1111123456889999999988877654 2344444332211 111111 123467899999
Q ss_pred CCCEE-EEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceee-ecCCCCcEEEEecccCCCc
Q 023500 154 KGDKL-VSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIA-SGAADDSVQFFVESKDDLI 231 (281)
Q Consensus 154 ~~~~l-~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~ 231 (281)
+++.| ++...++.|.+|+.+..... .................+..+.+++++.+. +...++.+.+|+...
T Consensus 192 dg~~l~v~~~~~~~i~~~d~~~~g~~----~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g---- 263 (333)
T 2dg1_A 192 DEKVLWVTETTANRLHRIALEDDGVT----IQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRG---- 263 (333)
T ss_dssp TSSEEEEEEGGGTEEEEEEECTTSSS----EEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTTS----
T ss_pred CCCEEEEEeCCCCeEEEEEecCCCcC----cccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCCC----
Confidence 99855 44556788999987421000 000000000000011356678888877544 444567888886532
Q ss_pred CCccceeeeeec---cCCCCCeeEEEEcCCCCeeEEEeCC
Q 023500 232 DGPSYKMLLKKE---KAHDMDVNSVQWSPGERRLLASASD 268 (281)
Q Consensus 232 ~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~~~~s~~~ 268 (281)
..... +... .+|...+.+++|+|++..++++...
T Consensus 264 --~~~~~-~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 264 --YPIGQ-ILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp --CEEEE-EECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred --CEEEE-EEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 11111 1111 1233368899999987666666554
No 177
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.57 E-value=1.4e-12 Score=106.09 Aligned_cols=246 Identities=9% Similarity=0.053 Sum_probs=155.3
Q ss_pred ccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCee
Q 023500 3 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEF 82 (281)
Q Consensus 3 ~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~ 82 (281)
...|.+++|+|++..++..+.++.++.|. . .....+.++...+.+++|+|+|++++++..++.|.+||...+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~- 78 (333)
T 2dg1_A 5 QQDLPTLFYSGKSNSAVPIISESELQTIT---A--EPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEI- 78 (333)
T ss_dssp -CCCCBCCSCGGGGCSSCCCCGGGSCEEE---C--EEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCE-
T ss_pred ccccceeeecCCccceeEEeecccCcccc---c--ceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcE-
Confidence 45678899999988877778888999983 1 23445556667789999999999888888899999999765442
Q ss_pred EEeEeecCCccceeEEEecCCCCeEEEEecC----CeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEE
Q 023500 83 ECVSVLQGHAQDVKMVQWHPTMDVLFSCSYD----NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKL 158 (281)
Q Consensus 83 ~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d----~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 158 (281)
......+...+.++.++|+++++++...+ +.|.+|+.+.... . ..+.. ..+...+..+.++|++..+
T Consensus 79 --~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~---~--~~~~~--~~~~~~~~~i~~d~~g~l~ 149 (333)
T 2dg1_A 79 --KRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNL---Q--DIIED--LSTAYCIDDMVFDSKGGFY 149 (333)
T ss_dssp --EEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSC---E--EEECS--SSSCCCEEEEEECTTSCEE
T ss_pred --EEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEE---E--EEEcc--CccCCcccceEECCCCCEE
Confidence 11222345678999999999988887766 6899997654321 1 01110 1233568899999999877
Q ss_pred EEeeC------CCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc--eeeecCCCCcEEEEecccCCC
Q 023500 159 VSCSD------DLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGAADDSVQFFVESKDDL 230 (281)
Q Consensus 159 ~s~~~------d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~ 230 (281)
++... .+.|..++.+.... .... . ....+..+.+++++ ++++...++.+.+|+......
T Consensus 150 v~~~~~~~~~~~~~l~~~~~~~~~~---------~~~~--~--~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~ 216 (333)
T 2dg1_A 150 FTDFRGYSTNPLGGVYYVSPDFRTV---------TPII--Q--NISVANGIALSTDEKVLWVTETTANRLHRIALEDDGV 216 (333)
T ss_dssp EEECCCBTTBCCEEEEEECTTSCCE---------EEEE--E--EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSS
T ss_pred EEeccccccCCCceEEEEeCCCCEE---------EEee--c--CCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCc
Confidence 76653 23444454332111 1110 1 12235678888886 345555677888887642111
Q ss_pred cCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEcc
Q 023500 231 IDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 278 (281)
Q Consensus 231 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~ 278 (281)
...............+ ..+..+++++++. ++++...++.|.+|+..
T Consensus 217 ~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~-l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 217 TIQPFGATIPYYFTGH-EGPDSCCIDSDDN-LYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp SEEEEEEEEEEECCSS-SEEEEEEEBTTCC-EEEEEETTTEEEEECTT
T ss_pred CcccccceEEEecCCC-CCCCceEECCCCC-EEEEEcCCCEEEEECCC
Confidence 0000000111111122 3578899999875 66666667899999864
No 178
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.54 E-value=2.7e-11 Score=96.38 Aligned_cols=198 Identities=15% Similarity=0.208 Sum_probs=134.1
Q ss_pred cceeEEEE-cCCCCEEEEeeC-CCcEEEEecCCCceeeeeeec-CCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCC
Q 023500 4 RTVRSCAW-SPSGKLLATASF-DATTCIWEDVGGDYECVATLE-GHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN 80 (281)
Q Consensus 4 ~~i~~~~~-~~~~~~l~tg~~-d~~i~lw~~~~~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~ 80 (281)
..+..+++ .++++++++... ++.|.+|+.. +.. +..+. .+.....+++++|+|+++++...++.|.+|+.. +.
T Consensus 77 ~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~-g~~--~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~ 152 (286)
T 1q7f_A 77 LYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY-GQF--VRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GN 152 (286)
T ss_dssp SSEEEEEEETTTTEEEEEECGGGCEEEEECTT-SCE--EEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred cCceEEEEEcCCCeEEEEcCCCCCEEEEECCC-CcE--EEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CC
Confidence 45778999 578888877643 7899999844 332 33332 344578899999999988888888999999853 32
Q ss_pred eeEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEE
Q 023500 81 EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 160 (281)
Q Consensus 81 ~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 160 (281)
... .....++...+..++++|+++++++.+.++.|++|+.+.. .+..+. ..++...+..+++++++.++++
T Consensus 153 ~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~------~~~~~~--~~g~~~~p~~i~~d~~G~l~v~ 223 (286)
T 1q7f_A 153 VLH-KFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ------YLRQIG--GEGITNYPIGVGINSNGEILIA 223 (286)
T ss_dssp EEE-EEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCC------EEEEES--CTTTSCSEEEEEECTTCCEEEE
T ss_pred EEE-EeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCC------EEEEEc--cCCccCCCcEEEECCCCCEEEE
Confidence 211 1111234456889999999998888888999999986432 122221 1223356789999999988888
Q ss_pred eeCCC-cEEEEeCCccccccCCCCcccceeEEeec-ccCcceEEEEeCCCceeeecCCCCcEEEEecc
Q 023500 161 CSDDL-TIKIWGADITRMQSGDGYASWRHLCTISG-YHDRTIFSVHWSREGIIASGAADDSVQFFVES 226 (281)
Q Consensus 161 ~~~d~-~i~~w~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~d~~~~~~~~~ 226 (281)
...++ .|.+|+.+... +..+.. .....+..+.+++++.++.+..++.+++|...
T Consensus 224 ~~~~~~~i~~~~~~g~~------------~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~ 279 (286)
T 1q7f_A 224 DNHNNFNLTIFTQDGQL------------ISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYV 279 (286)
T ss_dssp ECSSSCEEEEECTTSCE------------EEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECS
T ss_pred eCCCCEEEEEECCCCCE------------EEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEcc
Confidence 87775 99999864211 111111 11234668888888866555678999999653
No 179
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.52 E-value=6.5e-13 Score=110.45 Aligned_cols=231 Identities=10% Similarity=0.052 Sum_probs=136.7
Q ss_pred EEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeE-------------------EEEcCCCCEEEEe----
Q 023500 9 CAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKS-------------------VSWNASGTLLATC---- 65 (281)
Q Consensus 9 ~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~-------------------v~~~~~~~~l~s~---- 65 (281)
+.|+|||++|+.++.++.|.+|+..+++...+.. .+...... +.|+|+++.++.+
T Consensus 86 ~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~--~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~ 163 (396)
T 3c5m_A 86 GFISTDERAFFYVKNELNLMKVDLETLEEQVIYT--VDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYH 163 (396)
T ss_dssp CEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE--CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHH
T ss_pred ceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEe--cccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeecc
Confidence 6799999999999999999999987765433332 22222222 3467777766544
Q ss_pred -cCCCcEEEEEecCCCeeEEeEeecCCccceeEEEecC-CCCeEEEEecC------CeEEEEeCCCCCCCCceeeeeeee
Q 023500 66 -GRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP-TMDVLFSCSYD------NTIKVWWAEDTDSDNWHCVQTISE 137 (281)
Q Consensus 66 -~~d~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p-~~~~l~s~s~d------~~v~~w~~~~~~~~~~~~~~~~~~ 137 (281)
..+..|.+||+..+... .+..+...+..+.|+| ++..++.++.+ ..|.+|+.+... ...+..
T Consensus 164 ~~~~~~l~~~d~~~g~~~----~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~------~~~l~~ 233 (396)
T 3c5m_A 164 TNPTCRLIKVDIETGELE----VIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN------VRKIKE 233 (396)
T ss_dssp TCCCEEEEEEETTTCCEE----EEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC------CEESSC
T ss_pred CCCcceEEEEECCCCcEE----eeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc------eeEeec
Confidence 45678999998765432 1223456688999999 78767665544 357777664321 111211
Q ss_pred ccCCccccEEEEEEccCCCEEEEeeCC-----CcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCC-Ccee
Q 023500 138 SNNGHSSTIWALSFNAKGDKLVSCSDD-----LTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR-EGII 211 (281)
Q Consensus 138 ~~~~h~~~v~~~~~~~~~~~l~s~~~d-----~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~ 211 (281)
......+..+.|+|+++.|+..+.+ +.|.+||...++. +.+.... . .. ..|++ ++.+
T Consensus 234 --~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~---------~~l~~~~----~-~~-~~~s~~dg~~ 296 (396)
T 3c5m_A 234 --HAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLEN---------EEVMVMP----P-CS-HLMSNFDGSL 296 (396)
T ss_dssp --CCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCE---------EEEEECC----S-EE-EEEECSSSSE
T ss_pred --cCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCe---------EEeeeCC----C-CC-CCccCCCCce
Confidence 0012357789999999977766543 3489998764321 1111111 1 11 56777 6643
Q ss_pred -eecC----------------CCCcEEEEecccCCCcCCccceeeeeeccCCCC-----------CeeEEEEcCCCCeeE
Q 023500 212 -ASGA----------------ADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDM-----------DVNSVQWSPGERRLL 263 (281)
Q Consensus 212 -~~~~----------------~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-----------~v~~~~~~~~~~~~~ 263 (281)
+..+ .+..+.+|+...... ..+. .+.. .+..++|+|+++.++
T Consensus 297 l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~------~~l~----~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 366 (396)
T 3c5m_A 297 MVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA------QKLC----KHSTSWDVLDGDRQITHPHPSFTPNDDGVL 366 (396)
T ss_dssp EEEEECCC----------CCCCCCEEEEEETTTTBC------CEEE----ECCCCCCCBTTBSSTTCCCCEECTTSSEEE
T ss_pred EEEecCCcceeeccccccccCCCCcEEEEecccCce------EEcc----CCCCccccccccccCCCCCceEccCCCeEE
Confidence 3322 235677776543211 1111 1222 255678999998776
Q ss_pred EEeCCCCeEEEEEcc
Q 023500 264 ASASDDGMIKIWELA 278 (281)
Q Consensus 264 ~s~~~Dg~v~iw~~~ 278 (281)
.++..++...||.+.
T Consensus 367 ~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 367 FTSDFEGVPAIYIAD 381 (396)
T ss_dssp EEECTTSSCEEEEEE
T ss_pred EEecCCCCceEEEEE
Confidence 666667776777653
No 180
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.51 E-value=7.4e-13 Score=110.09 Aligned_cols=234 Identities=7% Similarity=-0.001 Sum_probs=135.5
Q ss_pred eeEEEEcCCCCEEEEeeCC---CcEEEEecCCCceeeeeeecCCCCC-eeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 6 VRSCAWSPSGKLLATASFD---ATTCIWEDVGGDYECVATLEGHENE-VKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 6 i~~~~~~~~~~~l~tg~~d---~~i~lw~~~~~~~~~~~~~~~h~~~-v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
+..++|+|||++|+..... ..|.+|+..+++.. .+..+... ...+.|+|+|++|+.++.++.|++|++..+..
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~---~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~ 114 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAV---QLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEE 114 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEE---ECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEE---EeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCc
Confidence 6678899999998766543 36778887766432 22223333 33478999999999999999999999876543
Q ss_pred eEEeEeecCCccceeE-------------------EEecCCCCeEEEE-----ecCCeEEEEeCCCCCCCCceeeeeeee
Q 023500 82 FECVSVLQGHAQDVKM-------------------VQWHPTMDVLFSC-----SYDNTIKVWWAEDTDSDNWHCVQTISE 137 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~-------------------v~~~p~~~~l~s~-----s~d~~v~~w~~~~~~~~~~~~~~~~~~ 137 (281)
. .+ ...+...... +.|+|+++.++.. ..+..|.+|++.... ...+.
T Consensus 115 ~-~~--~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~------~~~~~- 184 (396)
T 3c5m_A 115 Q-VI--YTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGE------LEVIH- 184 (396)
T ss_dssp E-EE--EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCC------EEEEE-
T ss_pred E-EE--EecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCc------EEeec-
Confidence 2 12 2222211111 3567777765543 356688889876532 11121
Q ss_pred ccCCccccEEEEEEcc-CCCEEEEeeCC------CcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCce
Q 023500 138 SNNGHSSTIWALSFNA-KGDKLVSCSDD------LTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI 210 (281)
Q Consensus 138 ~~~~h~~~v~~~~~~~-~~~~l~s~~~d------~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 210 (281)
.+...+..+.|+| ++..|+..+.+ ..|.+|+.+..... .+. .......+..+.|+|++.
T Consensus 185 ---~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~---------~l~--~~~~~~~~~~~~~spdg~ 250 (396)
T 3c5m_A 185 ---QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR---------KIK--EHAEGESCTHEFWIPDGS 250 (396)
T ss_dssp ---EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE---------ESS--CCCTTEEEEEEEECTTSS
T ss_pred ---cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee---------Eee--ccCCCccccceEECCCCC
Confidence 2345678899999 78767666543 34666765432211 110 000123466788998874
Q ss_pred -eeecCCC-----CcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcC-CCCeeEEEeC----------------
Q 023500 211 -IASGAAD-----DSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSP-GERRLLASAS---------------- 267 (281)
Q Consensus 211 -~~~~~~d-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~~s~~---------------- 267 (281)
++..+.+ +.+.+|+..... . .. +.... ... +.|+| +++. ++.++
T Consensus 251 ~l~~~~~~~~~~~~~l~~~d~~~g~-----~-~~-l~~~~----~~~-~~~s~~dg~~-l~~~~~~~p~~~~~~~~~~~~ 317 (396)
T 3c5m_A 251 AMAYVSYFKGQTDRVIYKANPETLE-----N-EE-VMVMP----PCS-HLMSNFDGSL-MVGDGCDAPVDVADADSYNIE 317 (396)
T ss_dssp CEEEEEEETTTCCEEEEEECTTTCC-----E-EE-EEECC----SEE-EEEECSSSSE-EEEEECCC----------CCC
T ss_pred EEEEEecCCCCccceEEEEECCCCC-----e-EE-eeeCC----CCC-CCccCCCCce-EEEecCCcceeeccccccccC
Confidence 3333222 337778654321 1 11 11111 123 88999 8874 44432
Q ss_pred CCCeEEEEEccc
Q 023500 268 DDGMIKIWELAN 279 (281)
Q Consensus 268 ~Dg~v~iw~~~~ 279 (281)
.+..|++||+..
T Consensus 318 ~~~~i~~~d~~~ 329 (396)
T 3c5m_A 318 NDPFLYVLNTKA 329 (396)
T ss_dssp CCCEEEEEETTT
T ss_pred CCCcEEEEeccc
Confidence 347899999753
No 181
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.49 E-value=2.2e-11 Score=109.86 Aligned_cols=246 Identities=16% Similarity=0.110 Sum_probs=148.1
Q ss_pred ceeEEEEcCCCCEEEEeeCC-----CcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCc---------
Q 023500 5 TVRSCAWSPSGKLLATASFD-----ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKS--------- 70 (281)
Q Consensus 5 ~i~~~~~~~~~~~l~tg~~d-----~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~--------- 70 (281)
.+..++|+|||++||.++.+ ..|++||..+++.... .+ +...+..++|+|| +.|+.++.|+.
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~--~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~ 239 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-EL--KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQAL 239 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EE--EEEESCCCEESTT-SEEEEEECCCC--------C
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cC--CCceeccEEEECC-CEEEEEEecCcccccccccC
Confidence 56788999999999877644 3599999988764321 11 1222357899999 98888776654
Q ss_pred -----EEEEEecCCCee-EEeEeecCCccceeEEEecCCCCeEEEEecCC-----eEEEEeCCCCCCCCceeeeeeeecc
Q 023500 71 -----VWIWEVMPGNEF-ECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN-----TIKVWWAEDTDSDNWHCVQTISESN 139 (281)
Q Consensus 71 -----v~~w~~~~~~~~-~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~-----~v~~w~~~~~~~~~~~~~~~~~~~~ 139 (281)
|++|++..+... ..+.....+...+..+.|+|++++|+..+.++ .|++|+++.... . +...+..
T Consensus 240 ~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~-~--~~~~l~~-- 314 (741)
T 1yr2_A 240 NYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKI-G--PVTALIP-- 314 (741)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEE-C--CCEEEEC--
T ss_pred CCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCC-c--ccEEecC--
Confidence 888887544321 12222233333578999999999888777544 888888754310 1 0122221
Q ss_pred CCccccEEEEEEccCCCEEEEeeCC----CcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecC
Q 023500 140 NGHSSTIWALSFNAKGDKLVSCSDD----LTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGA 215 (281)
Q Consensus 140 ~~h~~~v~~~~~~~~~~~l~s~~~d----~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 215 (281)
+...+... ++|+++.|+..+.+ +.|.+|+.+... ..++.+ ...+...+..+.++.+.++++..
T Consensus 315 --~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-------~~~~~l---~~~~~~~l~~~~~~~~~lv~~~~ 381 (741)
T 1yr2_A 315 --DLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGST-------PRFDTV---VPESKDNLESVGIAGNRLFASYI 381 (741)
T ss_dssp --SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSS-------CEEEEE---ECCCSSEEEEEEEEBTEEEEEEE
T ss_pred --CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCc-------cccEEE---ecCCCCeEEEEEEECCEEEEEEE
Confidence 12222333 34888888777654 347778765310 011111 12234456667777666788888
Q ss_pred CCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEe---CCCCeEEEEEccc
Q 023500 216 ADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASA---SDDGMIKIWELAN 279 (281)
Q Consensus 216 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~---~~Dg~v~iw~~~~ 279 (281)
.|+..++|..... +. ........+...+..++++|+++.++++. ...+.|.+||+..
T Consensus 382 ~dg~~~l~~~~~~----g~---~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 441 (741)
T 1yr2_A 382 HDAKSQVLAFDLD----GK---PAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPAT 441 (741)
T ss_dssp ETTEEEEEEEETT----SC---EEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTT
T ss_pred ECCEEEEEEEeCC----CC---ceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 8888888865421 11 11111111345688899999876555433 3457899999754
No 182
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.48 E-value=3.7e-11 Score=98.20 Aligned_cols=218 Identities=11% Similarity=0.190 Sum_probs=130.4
Q ss_pred cceeEEEEcCCCCEEEEee---------CCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCC---C--
Q 023500 4 RTVRSCAWSPSGKLLATAS---------FDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRD---K-- 69 (281)
Q Consensus 4 ~~i~~~~~~~~~~~l~tg~---------~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d---~-- 69 (281)
..+...++ ||+.+|... .++.|.+|+..+++... + ..+..++|+|||++|+.++.+ +
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~---l----~~~~~~~~SpDg~~la~~~~~~~~~~~ 85 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF---I----ENATMPRISPDGKKIAFMRANEEKKVS 85 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE---E----ESCEEEEECTTSSEEEEEEEETTTTEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE---c----ccCCCeEECCCCCEEEEEEeccCCCcc
Confidence 44667778 898877542 25678899887765332 2 457889999999998877654 3
Q ss_pred cEEEEEecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEecC---------------------------CeEEEEeCC
Q 023500 70 SVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYD---------------------------NTIKVWWAE 122 (281)
Q Consensus 70 ~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d---------------------------~~v~~w~~~ 122 (281)
.|.+|++..++. ..... +.. +..+.|+|+++.|+.++.+ ..|.+|++.
T Consensus 86 ~l~~~~~~~g~~---~~l~~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~ 160 (347)
T 2gop_A 86 EIWVADLETLSS---KKILE-AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTE 160 (347)
T ss_dssp EEEEEETTTTEE---EEEEE-ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETT
T ss_pred eEEEEECCCCce---EEEEc-CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECC
Confidence 366667654432 22222 223 8899999999988877643 467888775
Q ss_pred CCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeCCC-------cEEEEeCCccccccCCCCcccceeEEeecc
Q 023500 123 DTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDL-------TIKIWGADITRMQSGDGYASWRHLCTISGY 195 (281)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~-------~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (281)
... .+..+.. . .+..+.|+|++ .++++..++ ...+|..+.++ .+.+ ..
T Consensus 161 ~~~-----~~~~l~~-----~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~---------~~~l---~~- 215 (347)
T 2gop_A 161 SEE-----VIEEFEK-----P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK---------EEKM---FE- 215 (347)
T ss_dssp TTE-----EEEEEEE-----E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE---------EEEE---EE-
T ss_pred CCe-----EEeeecC-----C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCc---------eEEe---cc-
Confidence 432 1122221 1 46688999999 877776542 45666443111 1111 11
Q ss_pred cCcceEEEEeCCCce-eeecCCC--------CcEEEEecccCCCcCCccceeeeeeccCCCCCeeE-EEEcCCCCeeEEE
Q 023500 196 HDRTIFSVHWSREGI-IASGAAD--------DSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNS-VQWSPGERRLLAS 265 (281)
Q Consensus 196 ~~~~v~~~~~~~~~~-~~~~~~d--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~~~~s 265 (281)
+ ..+..+ +|+|. ++..+.+ ..+.+++ .. ........|...+.. +.|+ ++ ++++
T Consensus 216 ~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d-~~----------~~~~l~~~~~~~~~~~~~~s-dg--~~~~ 278 (347)
T 2gop_A 216 K-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD-GK----------EVMGILDEVDRGVGQAKIKD-GK--VYFT 278 (347)
T ss_dssp E-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC-SS----------CEEESSTTCCSEEEEEEEET-TE--EEEE
T ss_pred C-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC-CC----------ceEeccccCCcccCCccEEc-Cc--EEEE
Confidence 1 223333 55552 3333322 2455553 11 111222345667876 8998 65 7788
Q ss_pred eCCCCeEEEEEcc
Q 023500 266 ASDDGMIKIWELA 278 (281)
Q Consensus 266 ~~~Dg~v~iw~~~ 278 (281)
++.|+.++|| +.
T Consensus 279 ~~~~~~~~l~-~~ 290 (347)
T 2gop_A 279 LFEEGSVNLY-IW 290 (347)
T ss_dssp EEETTEEEEE-EE
T ss_pred EecCCcEEEE-Ec
Confidence 9999999999 75
No 183
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.48 E-value=1.3e-10 Score=93.44 Aligned_cols=245 Identities=6% Similarity=0.084 Sum_probs=149.3
Q ss_pred ceeEEEEcCCCCEEEE-------eeCCCcEEEEecCCCceeeeee--ecCCCCCeeEEEEcCC-CCEEEEecCCCcEEEE
Q 023500 5 TVRSCAWSPSGKLLAT-------ASFDATTCIWEDVGGDYECVAT--LEGHENEVKSVSWNAS-GTLLATCGRDKSVWIW 74 (281)
Q Consensus 5 ~i~~~~~~~~~~~l~t-------g~~d~~i~lw~~~~~~~~~~~~--~~~h~~~v~~v~~~~~-~~~l~s~~~d~~v~~w 74 (281)
....++|+++|+++++ +..++.|.+|+..+++...... ..++...+.+++++++ |+++++... +.|.+|
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~-~~l~~~ 97 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR-LGLLVV 97 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT-TEEEEE
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC-CCEEEE
Confidence 3468899999999888 6778999999876665432211 1124567899999999 766665544 478889
Q ss_pred EecCCCeeEEe-Eee-cC-CccceeEEEecCCCCeEEEEecC---------------CeEEEEeCCCCCCCCceeeeeee
Q 023500 75 EVMPGNEFECV-SVL-QG-HAQDVKMVQWHPTMDVLFSCSYD---------------NTIKVWWAEDTDSDNWHCVQTIS 136 (281)
Q Consensus 75 ~~~~~~~~~~~-~~~-~~-~~~~v~~v~~~p~~~~l~s~s~d---------------~~v~~w~~~~~~~~~~~~~~~~~ 136 (281)
+.. +.. ... ... .. ....+..+.+.|+++++++...+ +.|..++.. . . ...+.
T Consensus 98 d~~-g~~-~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g---~---~~~~~ 168 (314)
T 1pjx_A 98 QTD-GTF-EEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-G---Q---MIQVD 168 (314)
T ss_dssp ETT-SCE-EECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-S---C---EEEEE
T ss_pred eCC-CCE-EEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-C---C---EEEec
Confidence 876 432 111 110 11 12357899999999888877665 456555432 1 1 11111
Q ss_pred eccCCccccEEEEEEc----cCCCEEE-EeeCCCcEEEEeCCc-cccccCCCCcccceeEEeecccC-cceEEEEeCCCc
Q 023500 137 ESNNGHSSTIWALSFN----AKGDKLV-SCSDDLTIKIWGADI-TRMQSGDGYASWRHLCTISGYHD-RTIFSVHWSREG 209 (281)
Q Consensus 137 ~~~~~h~~~v~~~~~~----~~~~~l~-s~~~d~~i~~w~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~ 209 (281)
.+...+..++|+ |+++.|+ +...++.|.+|+.+. +... .......+. .+. ..+..+.++++|
T Consensus 169 ----~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~------~~~~~~~~~-~~~~~~p~~i~~d~~G 237 (314)
T 1pjx_A 169 ----TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIE------NKKVWGHIP-GTHEGGADGMDFDEDN 237 (314)
T ss_dssp ----EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEE------EEEEEEECC-CCSSCEEEEEEEBTTC
T ss_pred ----cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccc------cceEEEECC-CCCCCCCCceEECCCC
Confidence 112345788999 9986554 445678899998641 1100 000111111 111 346678888877
Q ss_pred eee-ecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 210 IIA-SGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 210 ~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
.+. +...++.+..|+...... ......+...+.+++|+|++..++++...++.|..|++..
T Consensus 238 ~l~v~~~~~~~i~~~d~~~g~~---------~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 238 NLLVANWGSSHIEVFGPDGGQP---------KMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp CEEEEEETTTEEEEECTTCBSC---------SEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CEEEEEcCCCEEEEEcCCCCcE---------eEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 544 444677888886542111 1111234467899999998876777877788999998753
No 184
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.47 E-value=2.2e-09 Score=85.50 Aligned_cols=238 Identities=10% Similarity=0.011 Sum_probs=156.2
Q ss_pred cceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeE
Q 023500 4 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFE 83 (281)
Q Consensus 4 ~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~ 83 (281)
..+.+++++++|+++++...++.|.+|+.. +..... ....+...+.+++++++|.+.++...++.|..|+.. +. ..
T Consensus 15 ~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~-~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~-~~ 90 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWITQHKANMISCINLD-GKITEY-PLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GI-IK 90 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEE-ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-EE
T ss_pred CCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEe-cCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-Cc-EE
Confidence 568899999999988877668899999877 543322 222345678999999999988888778889889864 22 21
Q ss_pred EeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeC
Q 023500 84 CVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 163 (281)
Q Consensus 84 ~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 163 (281)
. ..+......+..+.+.|++.++++...++.|..|+.. .. ...+.. ..+...+..+++++++..+++...
T Consensus 91 ~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~------~~~~~~--~~~~~~~~~i~~~~~g~l~v~~~~ 160 (299)
T 2z2n_A 91 E-YTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDD-GK------IREYEL--PNKGSYPSFITLGSDNALWFTENQ 160 (299)
T ss_dssp E-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-CC------EEEEEC--SSTTCCEEEEEECTTSCEEEEETT
T ss_pred E-EeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCC-CC------EEEecC--CCCCCCCceEEEcCCCCEEEEeCC
Confidence 1 2222344568899999999888887778899998762 11 111111 112345789999999988777777
Q ss_pred CCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCce-eeecCCCCcEEEEecccCCCcCCccceeeeee
Q 023500 164 DLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSVQFFVESKDDLIDGPSYKMLLKK 242 (281)
Q Consensus 164 d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (281)
++.|..|+.. +... .. ... .....+..+.+++++. +++...++.+..++. .. .. .. . .
T Consensus 161 ~~~i~~~~~~-g~~~---------~~-~~~-~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g-----~~-~~-~-~ 219 (299)
T 2z2n_A 161 NNAIGRITES-GDIT---------EF-KIP-TPASGPVGITKGNDDALWFVEIIGNKIGRITT-SG-----EI-TE-F-K 219 (299)
T ss_dssp TTEEEEECTT-CCEE---------EE-ECS-STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC-----CE-EE-E-E
T ss_pred CCEEEEEcCC-CcEE---------Ee-eCC-CCCCcceeEEECCCCCEEEEccCCceEEEECC-CC-----cE-EE-E-E
Confidence 7889888762 2111 00 001 1223466788887664 444445677888855 21 11 11 1 1
Q ss_pred ccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEc
Q 023500 243 EKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 277 (281)
Q Consensus 243 ~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~ 277 (281)
...+...+.++++.+++. ++++...++.|..|+.
T Consensus 220 ~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 220 IPTPNARPHAITAGAGID-LWFTEWGANKIGRLTS 253 (299)
T ss_dssp CSSTTCCEEEEEECSTTC-EEEEETTTTEEEEEET
T ss_pred CCCCCCCceeEEECCCCC-EEEeccCCceEEEECC
Confidence 123445688999999875 6666666788988886
No 185
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.45 E-value=7.1e-11 Score=105.76 Aligned_cols=236 Identities=11% Similarity=0.073 Sum_probs=138.3
Q ss_pred cCCCCEEEEeeCCC---cEEEEec--CCCceeeeeee----cCCCCCeeEEEEcCCCCEEE-----EecCCCcEEEEEec
Q 023500 12 SPSGKLLATASFDA---TTCIWED--VGGDYECVATL----EGHENEVKSVSWNASGTLLA-----TCGRDKSVWIWEVM 77 (281)
Q Consensus 12 ~~~~~~l~tg~~d~---~i~lw~~--~~~~~~~~~~~----~~h~~~v~~v~~~~~~~~l~-----s~~~d~~v~~w~~~ 77 (281)
+|+|++++-...++ .-.||.. .++....+... ++|...+..++|||||++|+ +|+.+.+|++||+.
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 47898877666554 3455543 33333323221 24666789999999999998 56667899999997
Q ss_pred CCCeeEEeEeecCCccce--eEEEecCCCCeEEEEecCCe-------------EEEEeCCCCCCCCceeeeeeeeccCCc
Q 023500 78 PGNEFECVSVLQGHAQDV--KMVQWHPTMDVLFSCSYDNT-------------IKVWWAEDTDSDNWHCVQTISESNNGH 142 (281)
Q Consensus 78 ~~~~~~~~~~~~~~~~~v--~~v~~~p~~~~l~s~s~d~~-------------v~~w~~~~~~~~~~~~~~~~~~~~~~h 142 (281)
.++... ..+...+ ..+.|+|+++.|+.++.|.. |++|++....... ..+. ....|
T Consensus 156 tg~~~~-----~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~-~lv~----~~~~~ 225 (695)
T 2bkl_A 156 SGEWSK-----VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKD-TVVH----ERTGD 225 (695)
T ss_dssp TCCBCS-----SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGC-EEEE----CCCCC
T ss_pred CCCCcC-----CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhc-eEEE----ecCCC
Confidence 665310 1122223 68899999999999998876 9999887543211 1111 11235
Q ss_pred cccEEEEEEccCCCEEEEeeCCC----cEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecC---
Q 023500 143 SSTIWALSFNAKGDKLVSCSDDL----TIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGA--- 215 (281)
Q Consensus 143 ~~~v~~~~~~~~~~~l~s~~~d~----~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--- 215 (281)
...+..+.|+|++++|+..+.++ .|.+|+..... ++.+ .. +........+.++.+++...
T Consensus 226 ~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~---------~~~l---~~-~~~~~~~~~~~~g~l~~~s~~~~ 292 (695)
T 2bkl_A 226 PTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD---------FRLL---VK-GVGAKYEVHAWKDRFYVLTDEGA 292 (695)
T ss_dssp TTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS---------CEEE---EE-CSSCCEEEEEETTEEEEEECTTC
T ss_pred CEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc---------eEEe---ec-CCCceEEEEecCCcEEEEECCCC
Confidence 56788999999999888777655 45555432111 1111 11 11122222333333444333
Q ss_pred CCCcEEEEecccCCCcCCccceeeeeeccCC-CCCeeEEEEcCCCCeeEEEeCCCCeEEEEEcc
Q 023500 216 ADDSVQFFVESKDDLIDGPSYKMLLKKEKAH-DMDVNSVQWSPGERRLLASASDDGMIKIWELA 278 (281)
Q Consensus 216 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~ 278 (281)
.++.+..|+...... .....+. ..+ ...+..++|+ +..++++...|+..+||.+.
T Consensus 293 ~~~~l~~~d~~~~~~---~~~~~l~---~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 293 PRQRVFEVDPAKPAR---ASWKEIV---PEDSSASLLSVSIV--GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp TTCEEEEEBTTBCSG---GGCEEEE---CCCSSCEEEEEEEE--TTEEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEEeCCCCCc---cCCeEEe---cCCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEe
Confidence 246677775533210 0011121 122 3457788888 34688899999998888654
No 186
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.44 E-value=8.3e-12 Score=102.93 Aligned_cols=173 Identities=12% Similarity=0.046 Sum_probs=121.8
Q ss_pred ceeEEEEcCCCCEEEEeeCCCcEEEEecCCCc---------eeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEE
Q 023500 5 TVRSCAWSPSGKLLATASFDATTCIWEDVGGD---------YECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWE 75 (281)
Q Consensus 5 ~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~---------~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~ 75 (281)
.++.+++++...++++|+.++ +.+|+..... ++.... ..+.+ |+.++| ++++|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~-~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWE-KEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEE-EECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEE-eeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 588999999999999999885 5569743221 222222 23666 999999 99999998 889999999
Q ss_pred ecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCC
Q 023500 76 VMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG 155 (281)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 155 (281)
+....... ....|...+.++.+.+. .+++++.||.+.+|++..... . . +...|.|++|+|.|
T Consensus 113 v~sl~~~~---~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~-----~-~-------~~~~Vs~v~WSpkG 174 (388)
T 1xip_A 113 LEELSEFR---TVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKST-----K-Q-------LAQNVTSFDVTNSQ 174 (388)
T ss_dssp SSSTTCEE---EEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCE-----E-E-------EEESEEEEEECSSE
T ss_pred chhhhccC---ccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcc-----c-c-------ccCCceEEEEcCCc
Confidence 87654322 23345556777776654 388899999999999875431 1 1 33579999999999
Q ss_pred CEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEee-----c---ccCcceEEEEeCCCceee
Q 023500 156 DKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTIS-----G---YHDRTIFSVHWSREGIIA 212 (281)
Q Consensus 156 ~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~-----~---~~~~~v~~~~~~~~~~~~ 212 (281)
++.|..||++++|+.+..... ....+. . .++..|.++.|.+++.++
T Consensus 175 --~~vg~~dg~i~~~~~~~~~~~---------~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~fl 228 (388)
T 1xip_A 175 --LAVLLKDRSFQSFAWRNGEME---------KQFEFSLPSELEELPVEEYSPLSVTILSPQDFL 228 (388)
T ss_dssp --EEEEETTSCEEEEEEETTEEE---------EEEEECCCHHHHTSCTTTSEEEEEEESSSSEEE
T ss_pred --eEEEEcCCcEEEEcCCCcccc---------ccceecCCcccccccCCCeeEEEEEEecCCeEE
Confidence 678899999999977543210 011110 0 146789999999887544
No 187
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.44 E-value=2.9e-10 Score=93.77 Aligned_cols=145 Identities=10% Similarity=0.105 Sum_probs=93.3
Q ss_pred CCCEEEEee------CCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEec----------CCCcEEEEEec
Q 023500 14 SGKLLATAS------FDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCG----------RDKSVWIWEVM 77 (281)
Q Consensus 14 ~~~~l~tg~------~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~----------~d~~v~~w~~~ 77 (281)
+++++.... .|+.+.+||..+++. +..+..+..+ .++|+|+|+++++++ .+++|.+||+.
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~--~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~ 89 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKF--LGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDAD 89 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCE--EEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETT
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeE--EEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECc
Confidence 556554433 477999999877653 4555555555 899999999998875 36789999986
Q ss_pred CCCeeEEeEeecC---CccceeEEEecCCCCeEEEEec--CCeEEEEeCCCCCCCCceeeee-eeeccCCccccEEEEEE
Q 023500 78 PGNEFECVSVLQG---HAQDVKMVQWHPTMDVLFSCSY--DNTIKVWWAEDTDSDNWHCVQT-ISESNNGHSSTIWALSF 151 (281)
Q Consensus 78 ~~~~~~~~~~~~~---~~~~v~~v~~~p~~~~l~s~s~--d~~v~~w~~~~~~~~~~~~~~~-~~~~~~~h~~~v~~~~~ 151 (281)
..+....+..... +......+.++|++++++++.. +++|.+||++... .+.. +.. .....+.+
T Consensus 90 t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~-----~~~~~i~~------~~~~~v~~ 158 (361)
T 2oiz_A 90 KLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGD-----YVEDVTAA------AGCWSVIP 158 (361)
T ss_dssp TCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTE-----EEEEEGGG------TTEEEEEE
T ss_pred CCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCc-----EEEEEecC------CCcceeEE
Confidence 5543322222211 2244678999999999988875 5799999887542 2333 211 11222455
Q ss_pred ccCC-CEEEEeeCCCcEEEEeCC
Q 023500 152 NAKG-DKLVSCSDDLTIKIWGAD 173 (281)
Q Consensus 152 ~~~~-~~l~s~~~d~~i~~w~~~ 173 (281)
.|++ ..+++.+.||.+.+|+.+
T Consensus 159 ~p~~~~~~~~~~~dg~~~~v~~~ 181 (361)
T 2oiz_A 159 QPNRPRSFMTICGDGGLLTINLG 181 (361)
T ss_dssp CTTSSSEEEEEETTSSEEEEEEC
T ss_pred cCCCCeeEEEECCCCcEEEEEEC
Confidence 5654 456667777777777653
No 188
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.42 E-value=1.7e-10 Score=93.86 Aligned_cols=200 Identities=12% Similarity=0.129 Sum_probs=133.4
Q ss_pred cceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeee---------cCCCCCeeEEEEcC-CCCEEEEec-CCCcEE
Q 023500 4 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATL---------EGHENEVKSVSWNA-SGTLLATCG-RDKSVW 72 (281)
Q Consensus 4 ~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~---------~~h~~~v~~v~~~~-~~~~l~s~~-~d~~v~ 72 (281)
.....++++|+|+++++...++.|.+|+..+.. ..+..+ .++-.....++++| ++.++++.+ .++.|+
T Consensus 91 ~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~-~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~ 169 (329)
T 3fvz_A 91 YLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKE-GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIV 169 (329)
T ss_dssp SSEEEEEECTTSCEEEEETTTTEEEEECTTCSS-CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEE
T ss_pred CCceEEEECCCCCEEEEECCCCEEEEEeCCCCe-EEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEE
Confidence 356789999999999999889999999875542 123333 23444678999999 788888886 689999
Q ss_pred EEEecCCCeeEEeEeec----------CCccceeEEEecCC-CCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCC
Q 023500 73 IWEVMPGNEFECVSVLQ----------GHAQDVKMVQWHPT-MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNG 141 (281)
Q Consensus 73 ~w~~~~~~~~~~~~~~~----------~~~~~v~~v~~~p~-~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~ 141 (281)
+|+. .+.. +..+. ++-.....++++|+ +.++++...++.|++|+.+... .+..+.. ..
T Consensus 170 ~~~~-~g~~---~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~-----~~~~~~~--~~ 238 (329)
T 3fvz_A 170 QFSP-SGKF---VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKE-----FVREIKH--AS 238 (329)
T ss_dssp EECT-TSCE---EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCC-----EEEEECC--TT
T ss_pred EEcC-CCCE---EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCc-----EEEEEec--cc
Confidence 9983 3332 22221 12234789999998 7788888889999999876322 2333321 23
Q ss_pred ccccEEEEEEcc------CCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEee--cccCcceEEEEeCCCc-eee
Q 023500 142 HSSTIWALSFNA------KGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTIS--GYHDRTIFSVHWSREG-IIA 212 (281)
Q Consensus 142 h~~~v~~~~~~~------~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~-~~~ 212 (281)
+...+..++|+| ++..+++...+..+++|+...++.. ..+. ..+...+..++++++| +++
T Consensus 239 ~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~-----------~~~~~~~~~~~~p~~ia~~~dG~lyv 307 (329)
T 3fvz_A 239 FGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEII-----------DVFKPVRKHFDMPHDIVASEDGTVYI 307 (329)
T ss_dssp TTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEE-----------EEECCSSSCCSSEEEEEECTTSEEEE
T ss_pred cCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEE-----------EEEcCCCCccCCeeEEEECCCCCEEE
Confidence 446678899998 3333333344558999987543221 1111 1233456788889887 566
Q ss_pred ecCCCCcEEEEecc
Q 023500 213 SGAADDSVQFFVES 226 (281)
Q Consensus 213 ~~~~d~~~~~~~~~ 226 (281)
+...++.++.|+..
T Consensus 308 ad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 308 GDAHTNTVWKFTLT 321 (329)
T ss_dssp EESSSCCEEEEEEE
T ss_pred EECCCCEEEEEeCC
Confidence 66778889988654
No 189
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.41 E-value=1.7e-09 Score=85.62 Aligned_cols=185 Identities=14% Similarity=0.088 Sum_probs=121.7
Q ss_pred CCCEEEEeeCCCcEEEEecCCCceeeeeeecCCC-CCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEEeEeecCC-
Q 023500 14 SGKLLATASFDATTCIWEDVGGDYECVATLEGHE-NEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGH- 91 (281)
Q Consensus 14 ~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~-~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~~~~- 91 (281)
.+++|++++.|+.|.+||..+++. +..+..+. ..+.++.+.|+|+.+++ .++.|..||. .++. +..+..+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~--~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G~~---~W~~~~~~ 75 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEI--VWEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITR-DGRE---LWNIAAPA 75 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEE--EEEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT-TSCE---EEEEECCT
T ss_pred CCcEEEeeCCCCEEEEEECCCCeE--EEEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC-CCCE---EEEEcCCC
Confidence 468899999999999999877764 44555554 47889999999999884 4678898887 4543 3333333
Q ss_pred ccceeEEEecCCCCeEEEEec-CCeEEEEeCCCCCCCCceeeeeee--eccCCccccEEEEEEccCCCEEEEeeCCCcEE
Q 023500 92 AQDVKMVQWHPTMDVLFSCSY-DNTIKVWWAEDTDSDNWHCVQTIS--ESNNGHSSTIWALSFNAKGDKLVSCSDDLTIK 168 (281)
Q Consensus 92 ~~~v~~v~~~p~~~~l~s~s~-d~~v~~w~~~~~~~~~~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~ 168 (281)
...+.++.+.|+++++++.+. ++.+..++.+.. .+.++. ....++...+..+++.+++.++++...++.|.
T Consensus 76 ~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk------~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~ 149 (276)
T 3no2_A 76 GCEMQTARILPDGNALVAWCGHPSTILEVNMKGE------VLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVR 149 (276)
T ss_dssp TCEEEEEEECTTSCEEEEEESTTEEEEEECTTSC------EEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEE
T ss_pred CccccccEECCCCCEEEEecCCCCEEEEEeCCCC------EEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEE
Confidence 346788999999999999887 667766654221 111111 11112223445567889999999999999999
Q ss_pred EEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEEecc
Q 023500 169 IWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVES 226 (281)
Q Consensus 169 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~ 226 (281)
.||.+ ++.. |+ +.. ...+.++...+++ +++++..++.+..++..
T Consensus 150 ~~d~~-G~~~-------w~----~~~--~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 150 EIAPN-GQLL-------NS----VKL--SGTPFSSAFLDNGDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp EECTT-SCEE-------EE----EEC--SSCCCEEEECTTSCEEEECBTTSEEEEECTT
T ss_pred EECCC-CCEE-------EE----EEC--CCCccceeEcCCCCEEEEeCCCCeEEEEeCc
Confidence 99986 4321 11 110 1223344555554 56666667677777554
No 190
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.38 E-value=1.5e-08 Score=80.55 Aligned_cols=237 Identities=9% Similarity=-0.014 Sum_probs=150.9
Q ss_pred cceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeE
Q 023500 4 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFE 83 (281)
Q Consensus 4 ~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~ 83 (281)
..+..++++++|+++++...++.|..|+.. +.... ..+......+.++++.|+|+++++...++.|..|+. .+.. .
T Consensus 57 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~-~ 132 (299)
T 2z2n_A 57 AKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKE-YTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKI-R 132 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE-E
T ss_pred CceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEE-EeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCE-E
Confidence 457889999999998887778889999875 33322 122224457889999999998888877888999987 3332 1
Q ss_pred EeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeC
Q 023500 84 CVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 163 (281)
Q Consensus 84 ~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 163 (281)
......+...+..+.+.|++.++++...++.|..|+. ... +..+. ...+...+..+++++++..+++...
T Consensus 133 -~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~------~~~~~--~~~~~~~~~~i~~~~~g~l~v~~~~ 202 (299)
T 2z2n_A 133 -EYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGD------ITEFK--IPTPASGPVGITKGNDDALWFVEII 202 (299)
T ss_dssp -EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCC------EEEEE--CSSTTCCEEEEEECTTSSEEEEETT
T ss_pred -EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCc------EEEee--CCCCCCcceeEEECCCCCEEEEccC
Confidence 1222334456889999999988888777889999876 221 11111 1122345788999999887777666
Q ss_pred CCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeec-CCCCcEEEEecccCCCcCCccceeeeee
Q 023500 164 DLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASG-AADDSVQFFVESKDDLIDGPSYKMLLKK 242 (281)
Q Consensus 164 d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (281)
++.|..|+. ..... . ... ......+..+.+++++.+..+ ..++.+..++... . .. .+.
T Consensus 203 ~~~i~~~~~-~g~~~---------~-~~~-~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g------~-~~-~~~- 261 (299)
T 2z2n_A 203 GNKIGRITT-SGEIT---------E-FKI-PTPNARPHAITAGAGIDLWFTEWGANKIGRLTSNN------I-IE-EYP- 261 (299)
T ss_dssp TTEEEEECT-TCCEE---------E-EEC-SSTTCCEEEEEECSTTCEEEEETTTTEEEEEETTT------E-EE-EEE-
T ss_pred CceEEEECC-CCcEE---------E-EEC-CCCCCCceeEEECCCCCEEEeccCCceEEEECCCC------c-eE-EEe-
Confidence 788999976 22111 0 001 112345678888887654444 4667888886521 1 11 111
Q ss_pred ccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEcc
Q 023500 243 EKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 278 (281)
Q Consensus 243 ~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~ 278 (281)
...+...+.++++ +++. ++++.+ .+.|..++..
T Consensus 262 ~~~~~~~~~~i~~-~~g~-l~v~~~-~~~l~~~~~~ 294 (299)
T 2z2n_A 262 IQIKSAEPHGICF-DGET-IWFAME-CDKIGKLTLI 294 (299)
T ss_dssp CSSSSCCEEEEEE-CSSC-EEEEET-TTEEEEEEEC
T ss_pred CCCCCCccceEEe-cCCC-EEEEec-CCcEEEEEcC
Confidence 1234456889999 7664 555555 4555556654
No 191
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.38 E-value=4.2e-09 Score=88.19 Aligned_cols=256 Identities=9% Similarity=-0.007 Sum_probs=148.9
Q ss_pred ceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCC--cEEEEEecCCCee
Q 023500 5 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDK--SVWIWEVMPGNEF 82 (281)
Q Consensus 5 ~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~--~v~~w~~~~~~~~ 82 (281)
....++|+|+|+++++...++.|++||..++....+. .. ..... ++|+|+++.|+.+..++ .|.+++.......
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~--~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVH--PG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEE--ET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEee--cc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence 4678999999998888888899999998776543222 22 22233 89999999988887766 6777776544321
Q ss_pred EEeEeecC-CccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCcccc-EE-EEEEccC-CCEE
Q 023500 83 ECVSVLQG-HAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSST-IW-ALSFNAK-GDKL 158 (281)
Q Consensus 83 ~~~~~~~~-~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~-v~-~~~~~~~-~~~l 158 (281)
.....+.. ......+++++|+...|+.+..++.|+.|+.+.... ..+..... .++... .. .++|+|+ +.++
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~---~~~~~~~~--~g~~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEV---TLIKQLEL--SGSLGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCE---EEEEECCC--CSCCCCSSCCEEEEETTTTEEE
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCE---EEEecccc--cCCCCCCccccEEEeCCCCEEE
Confidence 12211222 345678899999555555567788999998764321 11100001 111111 13 8999995 5566
Q ss_pred EEeeCCCcEEEEeCCcccccc-CCC-CcccceeEEeecccCcceEEEEeCCCc-eeeecC-CCCcEEEEecccCCCcCCc
Q 023500 159 VSCSDDLTIKIWGADITRMQS-GDG-YASWRHLCTISGYHDRTIFSVHWSREG-IIASGA-ADDSVQFFVESKDDLIDGP 234 (281)
Q Consensus 159 ~s~~~d~~i~~w~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~-~d~~~~~~~~~~~~~~~~~ 234 (281)
++-..++.|+.|+.+...... ... ...+..- ......-.....+++++++ ++++-. .+..++.|+.....+
T Consensus 283 v~d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg-~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v---- 357 (409)
T 3hrp_A 283 MSDQNLSSVYKITPDGECEWFCGSATQKTVQDG-LREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV---- 357 (409)
T ss_dssp EEETTTTEEEEECTTCCEEEEEECTTCCSCBCE-EGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE----
T ss_pred EEeCCCCEEEEEecCCCEEEEEeCCCCCCcCCC-cccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE----
Confidence 666677889999765321000 000 0000000 0000001235678888877 556666 678888886432111
Q ss_pred cceeeeee-----------ccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEc
Q 023500 235 SYKMLLKK-----------EKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 277 (281)
Q Consensus 235 ~~~~~~~~-----------~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~ 277 (281)
..+... ....-.....+++++++ .++++...++.|+.+++
T Consensus 358 --~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g-~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 358 --STVAGQVDVASQIDGTPLEATFNYPYDICYDGEG-GYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp --EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSS-EEEEEESTTCEEEEEEE
T ss_pred --EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCC-CEEEEECCCCeEEEEEe
Confidence 011110 00012357899999985 68888888889988775
No 192
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.38 E-value=1.3e-09 Score=88.65 Aligned_cols=238 Identities=9% Similarity=-0.012 Sum_probs=144.0
Q ss_pred eeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEEe
Q 023500 6 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECV 85 (281)
Q Consensus 6 i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~ 85 (281)
...+.+. .++++++...++.|.+||..+++. +..+. .......++++|+++..++...++.|.+||.........+
T Consensus 46 ~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~--~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i 121 (328)
T 3dsm_A 46 AQSMVIR-DGIGWIVVNNSHVIFAIDINTFKE--VGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYI 121 (328)
T ss_dssp EEEEEEE-TTEEEEEEGGGTEEEEEETTTCCE--EEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEE
T ss_pred ceEEEEE-CCEEEEEEcCCCEEEEEECcccEE--EEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEE
Confidence 4556664 455666777789999999987753 44443 3456788999999865555558899999998755422111
Q ss_pred Eeec--CCccceeEEEecCCCCeEEEEe-cCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEee
Q 023500 86 SVLQ--GHAQDVKMVQWHPTMDVLFSCS-YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS 162 (281)
Q Consensus 86 ~~~~--~~~~~v~~v~~~p~~~~l~s~s-~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 162 (281)
..-. ++......+.+ ..+.++++.. .++.|.++|.+... ....+.. ...+..+.++|++++++++.
T Consensus 122 ~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~-----~~~~i~~-----g~~p~~i~~~~dG~l~v~~~ 190 (328)
T 3dsm_A 122 ECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDK-----VVDELTI-----GIQPTSLVMDKYNKMWTITD 190 (328)
T ss_dssp ECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTE-----EEEEEEC-----SSCBCCCEECTTSEEEEEBC
T ss_pred EcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCe-----EEEEEEc-----CCCccceEEcCCCCEEEEEC
Confidence 1111 01113456666 3444444443 48899999876542 2223321 12345788999998777776
Q ss_pred CC----------CcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEEecccCCCc
Q 023500 163 DD----------LTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLI 231 (281)
Q Consensus 163 ~d----------~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~ 231 (281)
.+ +.|.++|.+..+. ...+..........+++++++ .+..... .+.+++.....+.
T Consensus 191 ~~~~~~~~~~~~~~v~~id~~t~~v-----------~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 191 GGYEGSPYGYEAPSLYRIDAETFTV-----------EKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVP 257 (328)
T ss_dssp CBCTTCSSCBCCCEEEEEETTTTEE-----------EEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCC
T ss_pred CCccCCccccCCceEEEEECCCCeE-----------EEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCcee
Confidence 55 7899998764321 111111112356778888754 3433333 6777766543221
Q ss_pred CCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEe----CCCCeEEEEEcc
Q 023500 232 DGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASA----SDDGMIKIWELA 278 (281)
Q Consensus 232 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~----~~Dg~v~iw~~~ 278 (281)
... . ...+......++++|++.+++++. ..++.|.+||..
T Consensus 258 ~~~----~---~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 258 VRP----F---LEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp SSC----S---BCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred eee----e---ecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 100 0 011235678899999666788887 678999999975
No 193
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.37 E-value=4.1e-10 Score=101.05 Aligned_cols=242 Identities=10% Similarity=0.081 Sum_probs=131.6
Q ss_pred CCCCEEEEeeCCC-c--EEEEec--CCCceeeeeee----cCCCCCeeEEEEcCCCCEEEEecCCC-----cEEEEEecC
Q 023500 13 PSGKLLATASFDA-T--TCIWED--VGGDYECVATL----EGHENEVKSVSWNASGTLLATCGRDK-----SVWIWEVMP 78 (281)
Q Consensus 13 ~~~~~l~tg~~d~-~--i~lw~~--~~~~~~~~~~~----~~h~~~v~~v~~~~~~~~l~s~~~d~-----~v~~w~~~~ 78 (281)
|+|++++-...++ . -.||-. .++....+... .+|...+..++|||||++|+.++.++ +|++||+..
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 7898776554332 1 144543 33332222111 23445688999999999988654433 899999976
Q ss_pred CCeeEEeEeecCCccceeEEEecCCCCeEEEEecCCe----------------EEEEeCCCCCCCCceeeeeeeeccCCc
Q 023500 79 GNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT----------------IKVWWAEDTDSDNWHCVQTISESNNGH 142 (281)
Q Consensus 79 ~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~----------------v~~w~~~~~~~~~~~~~~~~~~~~~~h 142 (281)
++.... .+ . ...+..++|+|+++.|+.++.++. |++|++....... ..+. ....|
T Consensus 161 g~~~~~--~~-~-~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~-~~v~----~~~~~ 231 (710)
T 2xdw_A 161 AKELPD--VL-E-RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSED-ILCA----EFPDE 231 (710)
T ss_dssp TEEEEE--EE-E-EECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGC-EEEE----CCTTC
T ss_pred CCCCcc--cc-c-CcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccc-eEEe----ccCCC
Confidence 643221 11 1 123678999999999998888766 9999886543111 1111 11234
Q ss_pred cccEEEEEEccCCCEEEEeeC-----CCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc--eeeecC
Q 023500 143 SSTIWALSFNAKGDKLVSCSD-----DLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGA 215 (281)
Q Consensus 143 ~~~v~~~~~~~~~~~l~s~~~-----d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~ 215 (281)
...+..+.|+|++++|+..+. +..|.+||...... ...+...++ .+.. +...+.. .+++++ +++.+.
T Consensus 232 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~-~~~~~~~~~---~l~~-~~~~~~~-~~s~dg~~l~~~s~ 305 (710)
T 2xdw_A 232 PKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESN-GITGILKWV---KLID-NFEGEYD-YVTNEGTVFTFKTN 305 (710)
T ss_dssp TTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSS-SSCSSCCCE---EEEC-SSSSCEE-EEEEETTEEEEEEC
T ss_pred CeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECccccc-ccCCccceE---EeeC-CCCcEEE-EEeccCCEEEEEEC
Confidence 555778999999998887764 56788888753000 000000011 1111 1111222 233333 333333
Q ss_pred C---CCcEEEEecccCCCcCCccceeeeeeccCCC--CCeeEEEEcCCCCeeEEEeCCCCeE--EEEEc
Q 023500 216 A---DDSVQFFVESKDDLIDGPSYKMLLKKEKAHD--MDVNSVQWSPGERRLLASASDDGMI--KIWEL 277 (281)
Q Consensus 216 ~---d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~~~s~~~Dg~v--~iw~~ 277 (281)
. +..+.+++...... .....+. .|. ..+..++|+++ ..++++...|+.. .+|++
T Consensus 306 ~~~~~~~l~~~d~~~~~~---~~~~~l~----~~~~~~~~~~~~~~~~-~~lv~~~~~~g~~~l~~~~~ 366 (710)
T 2xdw_A 306 RHSPNYRLINIDFTDPEE---SKWKVLV----PEHEKDVLEWVACVRS-NFLVLCYLHDVKNTLQLHDL 366 (710)
T ss_dssp TTCTTCEEEEEETTSCCG---GGCEEEE----CCCSSCEEEEEEEETT-TEEEEEEEETTEEEEEEEET
T ss_pred CCCCCCEEEEEeCCCCCc---ccceecc----CCCCCCeEEEEEEEcC-CEEEEEEEECCEEEEEEEEC
Confidence 2 23566665533210 0111221 232 25778899865 4678888889864 45554
No 194
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.36 E-value=2.5e-08 Score=79.32 Aligned_cols=238 Identities=8% Similarity=-0.007 Sum_probs=154.0
Q ss_pred cceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeE
Q 023500 4 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFE 83 (281)
Q Consensus 4 ~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~ 83 (281)
..+..++++++|+++++...++.|.+|+.. ++... ..+..+...+.++++.++|.+.++...++.|..+|.. +.. .
T Consensus 20 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~-~ 95 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE-FEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF-T 95 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-E
T ss_pred CCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEE-EECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe-E
Confidence 457889999999998887778999999877 54432 2223344678899999999988887778889988865 332 1
Q ss_pred EeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeC
Q 023500 84 CVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 163 (281)
Q Consensus 84 ~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 163 (281)
..........+..+.+.|++.++++...++.|..++.+ .. ...+. .......+..+++.+++..+++...
T Consensus 96 -~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~------~~~~~--~~~~~~~~~~i~~d~~g~l~v~~~~ 165 (300)
T 2qc5_A 96 -EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GT------IYEYD--LPNKGSYPAFITLGSDNALWFTENQ 165 (300)
T ss_dssp -EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SC------EEEEE--CSSTTCCEEEEEECTTSSEEEEETT
T ss_pred -EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CC------EEEcc--CCCCCCCceeEEECCCCCEEEEecC
Confidence 12222234568899999999888887778889888654 21 11111 1112345788999999987776666
Q ss_pred CCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCcee-eecCCCCcEEEEecccCCCcCCccceeeeee
Q 023500 164 DLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGII-ASGAADDSVQFFVESKDDLIDGPSYKMLLKK 242 (281)
Q Consensus 164 d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (281)
++.|..++.. +.. .. ... ......+..+.+++++.+ ++....+.+..++... .. .. . .
T Consensus 166 ~~~i~~~~~~-g~~---------~~-~~~-~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g------~~-~~-~-~ 224 (300)
T 2qc5_A 166 NNSIGRITNT-GKL---------EE-YPL-PTNAAAPVGITSGNDGALWFVEIMGNKIGRITTTG------EI-SE-Y-D 224 (300)
T ss_dssp TTEEEEECTT-CCE---------EE-EEC-SSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTC------CE-EE-E-E
T ss_pred CCeEEEECCC-CcE---------EE-eeC-CCCCCCcceEEECCCCCEEEEccCCCEEEEEcCCC------cE-EE-E-E
Confidence 7788888763 111 00 000 012234667788877654 4444556677775421 11 11 1 1
Q ss_pred ccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEc
Q 023500 243 EKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 277 (281)
Q Consensus 243 ~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~ 277 (281)
...+...+.++++.+++. ++++...++.|..|+.
T Consensus 225 ~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 225 IPTPNARPHAITAGKNSE-IWFTEWGANQIGRITN 258 (300)
T ss_dssp CSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECT
T ss_pred CCCCCCCceEEEECCCCC-EEEeccCCCeEEEECC
Confidence 122345688999999875 6666666788888876
No 195
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.34 E-value=7.4e-10 Score=91.27 Aligned_cols=224 Identities=13% Similarity=0.084 Sum_probs=126.0
Q ss_pred EEEEcCCCCEEEEee----------CCCcEEEEecCCCceeeeeeecC------CCCCeeEEEEcCCCCEEEEecC--CC
Q 023500 8 SCAWSPSGKLLATAS----------FDATTCIWEDVGGDYECVATLEG------HENEVKSVSWNASGTLLATCGR--DK 69 (281)
Q Consensus 8 ~~~~~~~~~~l~tg~----------~d~~i~lw~~~~~~~~~~~~~~~------h~~~v~~v~~~~~~~~l~s~~~--d~ 69 (281)
.++|+|||+++..++ .++.|.+||..+.+. +..+.. +......++|+|+|++|+++.. ++
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~--~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~ 131 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTF--EKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPAT 131 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCE--EEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcE--EEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCC
Confidence 689999999888776 367799999876543 333331 1234567999999999988763 68
Q ss_pred cEEEEEecCCCeeEEeEe-ecCCccceeEEEecCCC-CeEEEEecCCeEEEEeCCCCCCCC-------------------
Q 023500 70 SVWIWEVMPGNEFECVSV-LQGHAQDVKMVQWHPTM-DVLFSCSYDNTIKVWWAEDTDSDN------------------- 128 (281)
Q Consensus 70 ~v~~w~~~~~~~~~~~~~-~~~~~~~v~~v~~~p~~-~~l~s~s~d~~v~~w~~~~~~~~~------------------- 128 (281)
+|.+||+...+. +.. +... ....+.+.|++ ..+++.+.|+++.+|+.+......
T Consensus 132 ~v~v~d~~~~~~---~~~~i~~~--~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 206 (361)
T 2oiz_A 132 SIGIVDVAKGDY---VEDVTAAA--GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIA 206 (361)
T ss_dssp EEEEEETTTTEE---EEEEGGGT--TEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSC
T ss_pred eEEEEECCCCcE---EEEEecCC--CcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEE
Confidence 999999976532 233 2211 11223444543 345555666666555543211000
Q ss_pred --------------------------ceeeeeeeecc-----CC-ccccEEEEEEccCCCEEEEeeC-----------CC
Q 023500 129 --------------------------WHCVQTISESN-----NG-HSSTIWALSFNAKGDKLVSCSD-----------DL 165 (281)
Q Consensus 129 --------------------------~~~~~~~~~~~-----~~-h~~~v~~~~~~~~~~~l~s~~~-----------d~ 165 (281)
........... .+ .+.....++|+|++..++.... +.
T Consensus 207 ~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~ 286 (361)
T 2oiz_A 207 PALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAA 286 (361)
T ss_dssp CEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCS
T ss_pred ecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCc
Confidence 00000000000 00 0011112688998877666532 34
Q ss_pred cEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCce-eeecCCCCcEEEEecccCCCcCCccceeeeeecc
Q 023500 166 TIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSVQFFVESKDDLIDGPSYKMLLKKEK 244 (281)
Q Consensus 166 ~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (281)
.|.+||.+..+ .+..+.. + . +..+.++|++. ++++.. +.+.+|+.....+ .......
T Consensus 287 ~v~viD~~t~~-----------~v~~i~~-~-~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l-------~~~~~i~ 344 (361)
T 2oiz_A 287 EIWVMDTKTKQ-----------RVARIPG-R-D-ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEP-------KLLRTIE 344 (361)
T ss_dssp EEEEEETTTTE-----------EEEEEEC-T-T-CCEEEEETTTTEEEEECS-SCEEEEECSSSSC-------EEEEEET
T ss_pred eEEEEECCCCc-----------EEEEEec-C-C-eeEEEECCCCCEEEEeCC-CeEEEEECCCCcc-------eeeEEec
Confidence 79999876432 2233332 2 2 78889998764 444444 8999996643200 1222223
Q ss_pred CCCCCeeEEEEcCCCC
Q 023500 245 AHDMDVNSVQWSPGER 260 (281)
Q Consensus 245 ~h~~~v~~~~~~~~~~ 260 (281)
.+....+.++++|+|+
T Consensus 345 ~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 345 GAAEASLQVQFHPVGG 360 (361)
T ss_dssp TSCSSEEEEEECCCSC
T ss_pred cCCCCcEEEEecCCCC
Confidence 4556678899999874
No 196
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.34 E-value=7.5e-09 Score=82.84 Aligned_cols=231 Identities=11% Similarity=0.109 Sum_probs=137.6
Q ss_pred eEEEEcCC-CCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEEe
Q 023500 7 RSCAWSPS-GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECV 85 (281)
Q Consensus 7 ~~~~~~~~-~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~ 85 (281)
-...|+|+ +.++++...++.|..||..++... .+. ....+.+++++|+|+++++. +..|.+||...+. ...+
T Consensus 16 Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~---~~~-~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~-~~~~ 88 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ---RVT-MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQS-AVVL 88 (297)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTTCCEE---EEE-CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTE-EEEE
T ss_pred cCCeEECCCCEEEEEECCCCEEEEEECCCCcEE---EEe-CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCc-EEEE
Confidence 46689995 556777777889999998776532 222 45678999999999966654 5678889876443 2222
Q ss_pred EeecC--CccceeEEEecCCCCeEEEEecC---------CeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccC
Q 023500 86 SVLQG--HAQDVKMVQWHPTMDVLFSCSYD---------NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK 154 (281)
Q Consensus 86 ~~~~~--~~~~v~~v~~~p~~~~l~s~s~d---------~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 154 (281)
..... ....++.+.+.|++.++++...+ ..-.+|.+.... . ...+. .+....+.++|+|+
T Consensus 89 ~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g--~---~~~~~----~~~~~pngi~~spd 159 (297)
T 3g4e_A 89 ATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH--H---VKKYF----DQVDISNGLDWSLD 159 (297)
T ss_dssp EECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS--C---EEEEE----EEESBEEEEEECTT
T ss_pred EecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC--C---EEEEe----eccccccceEEcCC
Confidence 22111 12347889999999977765432 334556554221 1 11111 11234678999999
Q ss_pred CCEE-EEeeCCCcEEEEeCC--ccccccCCCCcccceeEEeecccCcceEEEEeCCCcee-eecCCCCcEEEEecccCCC
Q 023500 155 GDKL-VSCSDDLTIKIWGAD--ITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGII-ASGAADDSVQFFVESKDDL 230 (281)
Q Consensus 155 ~~~l-~s~~~d~~i~~w~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~ 230 (281)
++.| ++.+.++.|..|+.+ .+... ..+....+. ........+.++++|.+ ++...++.+..|+....
T Consensus 160 g~~lyv~~~~~~~i~~~~~d~~~G~~~------~~~~~~~~~-~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG-- 230 (297)
T 3g4e_A 160 HKIFYYIDSLSYSVDAFDYDLQTGQIS------NRRSVYKLE-KEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTG-- 230 (297)
T ss_dssp SCEEEEEEGGGTEEEEEEECTTTCCEE------EEEEEEECC-GGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTC--
T ss_pred CCEEEEecCCCCcEEEEeccCCCCccc------CcEEEEECC-CCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCc--
Confidence 9866 455567889999763 11110 001111111 12245567888887754 44445667888855321
Q ss_pred cCCccceeeeeeccCCCCCeeEEEEc-CCCCeeEEEeCCC
Q 023500 231 IDGPSYKMLLKKEKAHDMDVNSVQWS-PGERRLLASASDD 269 (281)
Q Consensus 231 ~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~~~~s~~~D 269 (281)
. .......+...+++++|. |+++.++++.+.+
T Consensus 231 ---~----~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 231 ---K----RLQTVKLPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp ---C----EEEEEECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred ---e----EEEEEECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 1 122223344678999998 7777787777654
No 197
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.33 E-value=3.3e-09 Score=85.20 Aligned_cols=230 Identities=11% Similarity=0.090 Sum_probs=134.8
Q ss_pred eeEEEEcCCCC-EEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEE
Q 023500 6 VRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFEC 84 (281)
Q Consensus 6 i~~~~~~~~~~-~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~ 84 (281)
.....|+|+|+ +++++..++.|..|+.. +.. ..+..+...+..++++++|+++++...++.|..|+.. +.....
T Consensus 47 ~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~---~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~ 121 (305)
T 3dr2_A 47 SEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTV---DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLL 121 (305)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEETT-SCE---EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred ccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCE---EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEE
Confidence 45678999998 67777788899999873 432 2334456778999999999987777677888888864 331111
Q ss_pred eEeecCC-ccceeEEEecCCCCeEEE----Eec-------------CCeEEEEeCCCCCCCCceeeeeeeeccCCccccE
Q 023500 85 VSVLQGH-AQDVKMVQWHPTMDVLFS----CSY-------------DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTI 146 (281)
Q Consensus 85 ~~~~~~~-~~~v~~v~~~p~~~~l~s----~s~-------------d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v 146 (281)
.....+. ...++.+.+.|++.++++ +.. .+.|..++..... ... +. .....
T Consensus 122 ~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~---~~~---~~-----~~~~p 190 (305)
T 3dr2_A 122 VGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSP---LQR---MA-----DLDHP 190 (305)
T ss_dssp ECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCC---CEE---EE-----EESSE
T ss_pred EeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCc---EEE---Ee-----cCCCC
Confidence 1111111 124678999999998886 332 2345555443221 111 11 12345
Q ss_pred EEEEEccCCCEEEEeeCC------CcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecCCCCcE
Q 023500 147 WALSFNAKGDKLVSCSDD------LTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSV 220 (281)
Q Consensus 147 ~~~~~~~~~~~l~s~~~d------~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~~ 220 (281)
..++|+|+++.|+.+... +.|..|+.+.... .....+..........+.++++|.+..+..+ .+
T Consensus 191 ~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l---------~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~-gv 260 (305)
T 3dr2_A 191 NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGAL---------HDRRHFASVPDGLPDGFCVDRGGWLWSSSGT-GV 260 (305)
T ss_dssp EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEE---------EEEEEEECCSSSCCCSEEECTTSCEEECCSS-EE
T ss_pred cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCc---------cCCeEEEECCCCCCCeEEECCCCCEEEecCC-cE
Confidence 789999999977776654 6788887642210 0011111111222345667777766655544 47
Q ss_pred EEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEE
Q 023500 221 QFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIK 273 (281)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~ 273 (281)
.+|+... .. ........ .+..++|.|+++.++++++ ++..+
T Consensus 261 ~~~~~~g------~~----~~~~~~~~-~~~~~~f~~d~~~L~it~~-~~l~~ 301 (305)
T 3dr2_A 261 CVFDSDG------QL----LGHIPTPG-TASNCTFDQAQQRLFITGG-PCLWM 301 (305)
T ss_dssp EEECTTS------CE----EEEEECSS-CCCEEEECTTSCEEEEEET-TEEEE
T ss_pred EEECCCC------CE----EEEEECCC-ceeEEEEeCCCCEEEEEcC-CeEEE
Confidence 7775422 11 11111222 4888999988777666554 44433
No 198
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.32 E-value=8.1e-10 Score=88.30 Aligned_cols=160 Identities=16% Similarity=0.189 Sum_probs=106.0
Q ss_pred ccceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeee-ecCC-CCCeeEEEEcCCCCEEEE----ecCC--------
Q 023500 3 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVAT-LEGH-ENEVKSVSWNASGTLLAT----CGRD-------- 68 (281)
Q Consensus 3 ~~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~-~~~h-~~~v~~v~~~~~~~~l~s----~~~d-------- 68 (281)
...+..++++|+|+++++...++.|.+||..+++...+.. ..+. ...++.++++|+|+++++ |..+
T Consensus 68 ~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~ 147 (296)
T 3e5z_A 68 SHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGE 147 (296)
T ss_dssp CSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCC
T ss_pred CCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcccccccccccccc
Confidence 3567899999999998887777899999986665433221 1111 134678999999998887 3310
Q ss_pred ---CcEEEEEecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCc-eeeeeeeeccCCccc
Q 023500 69 ---KSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNW-HCVQTISESNNGHSS 144 (281)
Q Consensus 69 ---~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~-~~~~~~~~~~~~h~~ 144 (281)
+.-.||.+..... ...+..+......++|+|+++.+++.+.++.|.+|++..... . .....+ ..+..
T Consensus 148 ~~~~~~~l~~~~~~g~---~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~--~~~~~~~~----~~~~~ 218 (296)
T 3e5z_A 148 MELPGRWVFRLAPDGT---LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGE--TEYQGVHF----TVEPG 218 (296)
T ss_dssp CCSSSCEEEEECTTSC---EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSC--EEEEEEEE----CCSSS
T ss_pred ccCCCcEEEEECCCCC---EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCc--CcCCCeEe----eCCCC
Confidence 1225566544332 222344555678999999999888888889999998862211 1 001111 12344
Q ss_pred cEEEEEEccCCCEEEEeeCCCcEEEEeCC
Q 023500 145 TIWALSFNAKGDKLVSCSDDLTIKIWGAD 173 (281)
Q Consensus 145 ~v~~~~~~~~~~~l~s~~~d~~i~~w~~~ 173 (281)
.+..+++++++.++++. ++.|.+|+.+
T Consensus 219 ~p~~i~~d~~G~l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 219 KTDGLRVDAGGLIWASA--GDGVHVLTPD 245 (296)
T ss_dssp CCCSEEEBTTSCEEEEE--TTEEEEECTT
T ss_pred CCCeEEECCCCCEEEEc--CCeEEEECCC
Confidence 56678999999876665 7789999875
No 199
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.32 E-value=4e-11 Score=98.87 Aligned_cols=140 Identities=11% Similarity=-0.007 Sum_probs=100.6
Q ss_pred eeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEEe
Q 023500 6 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECV 85 (281)
Q Consensus 6 i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~ 85 (281)
|+.++| ++++|+++ .++.|++||...... ......|...+.++.+.+. .++++..||+|.+||+......
T Consensus 90 V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~--~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~--- 159 (388)
T 1xip_A 90 VIFVCF--HGDQVLVS-TRNALYSLDLEELSE--FRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTK--- 159 (388)
T ss_dssp EEEEEE--ETTEEEEE-ESSEEEEEESSSTTC--EEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEE---
T ss_pred eeEEEE--CCCEEEEE-cCCcEEEEEchhhhc--cCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccc---
Confidence 899999 99999998 889999999765432 2344567788888877653 3888899999999999765431
Q ss_pred EeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeecc--CCccccEEEEEEccCCCEEEEe
Q 023500 86 SVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESN--NGHSSTIWALSFNAKGDKLVSC 161 (281)
Q Consensus 86 ~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~s~ 161 (281)
.+...|+|++|+|.+ ++.|..||++++|+.+.......+.+....... .+|...|.++.|.+++.+|++-
T Consensus 160 ----~~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 160 ----QLAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp ----EEEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred ----cccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 134679999999999 678899999999966543210011111111011 1467889999999998887773
No 200
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.30 E-value=2.6e-09 Score=83.95 Aligned_cols=194 Identities=12% Similarity=0.067 Sum_probs=129.0
Q ss_pred cceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeec-CCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCee
Q 023500 4 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLE-GHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEF 82 (281)
Q Consensus 4 ~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~ 82 (281)
..+..++++++|+++++.. ++.|.+|+..+.... .+. .......+++++|+|+++++...++.|.+|+......
T Consensus 67 ~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~---~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~- 141 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT---VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ- 141 (270)
T ss_dssp CSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE---ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC-
T ss_pred CCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe---eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee-
Confidence 3567899999999777766 888999987665322 222 2235678999999999888887888999986432221
Q ss_pred EEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEee
Q 023500 83 ECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS 162 (281)
Q Consensus 83 ~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 162 (281)
.............++++|+++++++...++.|.+|+..... ... .. ..+...+..+++++++..+++..
T Consensus 142 --~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~-----~~~-~~---~~~~~~p~~i~~d~~g~l~v~~~ 210 (270)
T 1rwi_B 142 --TVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN-----QVV-LP---FTDITAPWGIAVDEAGTVYVTEH 210 (270)
T ss_dssp --EECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCC-----EEE-CC---CSSCCSEEEEEECTTCCEEEEET
T ss_pred --EeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCc-----eEe-ec---ccCCCCceEEEECCCCCEEEEEC
Confidence 11112233457889999999988887778899999765432 111 11 12225578899999997777777
Q ss_pred CCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEEec
Q 023500 163 DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVE 225 (281)
Q Consensus 163 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~~ 225 (281)
.++.|..|+.+...... ....+...+..+.+++++ ++++...++.++++..
T Consensus 211 ~~~~v~~~~~~~~~~~~------------~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~ 262 (270)
T 1rwi_B 211 NTNQVVKLLAGSTTSTV------------LPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTS 262 (270)
T ss_dssp TTSCEEEECTTCSCCEE------------CCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECC
T ss_pred CCCcEEEEcCCCCccee------------eccCCCCCceeEEECCCCCEEEEECCCCEEEEEcC
Confidence 78899999875321110 000112446778888766 4566667888888854
No 201
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.26 E-value=1.4e-07 Score=75.01 Aligned_cols=236 Identities=8% Similarity=0.013 Sum_probs=148.6
Q ss_pred cceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeE
Q 023500 4 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFE 83 (281)
Q Consensus 4 ~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~ 83 (281)
..+..++++++|+++++...++.|..||.. ++.. ...+......+.++++.++|++.++...++.|..++.. +.. .
T Consensus 62 ~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~ 137 (300)
T 2qc5_A 62 AKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTI-Y 137 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCE-E
T ss_pred CcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCE-E
Confidence 457889999999988877777889999876 4432 22222234678899999999988888778888888865 332 1
Q ss_pred EeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeC
Q 023500 84 CVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 163 (281)
Q Consensus 84 ~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 163 (281)
...+......+..+.+.|+++++++...++.|..++.. .. ...+. ...+...+..+++++++...++...
T Consensus 138 -~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~------~~~~~--~~~~~~~~~~i~~d~~g~l~v~~~~ 207 (300)
T 2qc5_A 138 -EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITNT-GK------LEEYP--LPTNAAAPVGITSGNDGALWFVEIM 207 (300)
T ss_dssp -EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT-CC------EEEEE--CSSTTCCEEEEEECTTSSEEEEETT
T ss_pred -EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECCC-Cc------EEEee--CCCCCCCcceEEECCCCCEEEEccC
Confidence 11233334567899999999977777778889888662 11 11111 1122345788999999877776666
Q ss_pred CCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCcee-eecCCCCcEEEEecccCCCcCCccceeeeee
Q 023500 164 DLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGII-ASGAADDSVQFFVESKDDLIDGPSYKMLLKK 242 (281)
Q Consensus 164 d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (281)
.+.|..|+.. +.. .. .... .....+..+.+++++.+ ++...++.+..++... .. . ...
T Consensus 208 ~~~i~~~~~~-g~~---------~~-~~~~-~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g------~~-~-~~~- 266 (300)
T 2qc5_A 208 GNKIGRITTT-GEI---------SE-YDIP-TPNARPHAITAGKNSEIWFTEWGANQIGRITNDN------TI-Q-EYQ- 266 (300)
T ss_dssp TTEEEEECTT-CCE---------EE-EECS-STTCCEEEEEECSTTCEEEEETTTTEEEEECTTS------CE-E-EEE-
T ss_pred CCEEEEEcCC-CcE---------EE-EECC-CCCCCceEEEECCCCCEEEeccCCCeEEEECCCC------cE-E-EEE-
Confidence 7789998763 111 00 0011 12345677888877654 4444567788885521 11 1 111
Q ss_pred ccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEc
Q 023500 243 EKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 277 (281)
Q Consensus 243 ~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~ 277 (281)
.......+.++++.+++. ++++.. . .|..++.
T Consensus 267 ~~~~~~~~~~i~~~~~g~-l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 267 LQTENAEPHGITFGKDGS-VWFALK-C-KIGKLNL 298 (300)
T ss_dssp CCSTTCCCCCEEECTTSC-EEEECS-S-EEEEEEE
T ss_pred CCccCCccceeEeCCCCC-EEEEcc-C-ceEEeCC
Confidence 122335578899999875 555554 4 6666664
No 202
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.25 E-value=3.8e-08 Score=85.65 Aligned_cols=238 Identities=12% Similarity=0.056 Sum_probs=144.2
Q ss_pred CCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEec--CCCeeEEeEeecC
Q 023500 13 PSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVM--PGNEFECVSVLQG 90 (281)
Q Consensus 13 ~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~--~~~~~~~~~~~~~ 90 (281)
|.+.++++...++.|.++|..+++. +..+. ....+..+.|+|||+++++++.|+.|.+||+. ..+. +..+..
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v--~~~i~-~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~---v~~i~~ 238 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEI--KTVLD-TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTT---VAEIKI 238 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCE--EEEEE-CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCE---EEEEEC
T ss_pred CCceEEEEeCCCCeEEEEECCCCeE--EEEEe-CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcE---eEEEec
Confidence 4455777888899999999887753 44444 23456789999999999999999999999984 3332 233332
Q ss_pred CccceeEEEec----CCCCeEEEEec-CCeEEEEeCCCCCCCCceeeeeeeec---cC---Cccc-cEEEEEEccCCC-E
Q 023500 91 HAQDVKMVQWH----PTMDVLFSCSY-DNTIKVWWAEDTDSDNWHCVQTISES---NN---GHSS-TIWALSFNAKGD-K 157 (281)
Q Consensus 91 ~~~~v~~v~~~----p~~~~l~s~s~-d~~v~~w~~~~~~~~~~~~~~~~~~~---~~---~h~~-~v~~~~~~~~~~-~ 157 (281)
. .....+.|+ |++++++++++ ++++.++|..+.. .+..+... .. .|+. .+..+..++++. .
T Consensus 239 G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~-----~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~ 312 (567)
T 1qks_A 239 G-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLE-----PKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEF 312 (567)
T ss_dssp C-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCC-----EEEEEECCEECTTTCCEESCCCEEEEEECSSSSEE
T ss_pred C-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCc-----EEEEEeccccccccccccCCCceEEEEEcCCCCEE
Confidence 2 235789999 69998776665 4899999865432 22222211 01 1223 577788888755 4
Q ss_pred EEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCce--eeecCCCCcEEEEecccCCCcCCcc
Q 023500 158 LVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI--IASGAADDSVQFFVESKDDLIDGPS 235 (281)
Q Consensus 158 l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~~~~~ 235 (281)
++....+|.|.++|....+. .....+. .......+.|++++. +++...++.+.+++.....+
T Consensus 313 vv~~~~~g~v~~vd~~~~~~---------~~v~~i~--~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl----- 376 (567)
T 1qks_A 313 IVNVKETGKILLVDYTDLNN---------LKTTEIS--AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKL----- 376 (567)
T ss_dssp EEEETTTTEEEEEETTCSSE---------EEEEEEE--CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEE-----
T ss_pred EEEecCCCeEEEEecCCCcc---------ceeeeee--ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcE-----
Confidence 55556778999988653210 0011111 123345677888763 34444567788886654211
Q ss_pred ceeeee-eccCCCCCeeEEEEcCCCCeeEEEeC-CCCeEEEEEccc
Q 023500 236 YKMLLK-KEKAHDMDVNSVQWSPGERRLLASAS-DDGMIKIWELAN 279 (281)
Q Consensus 236 ~~~~~~-~~~~h~~~v~~~~~~~~~~~~~~s~~-~Dg~v~iw~~~~ 279 (281)
....-. ....|...-..+ ++|++..+++++. .++.|.++|...
T Consensus 377 ~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 377 VAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp EEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred EEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 111111 112343222122 5787566666654 468999998754
No 203
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.24 E-value=4.6e-08 Score=79.32 Aligned_cols=230 Identities=9% Similarity=0.040 Sum_probs=134.6
Q ss_pred eEEEEcCCC-CEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEEe
Q 023500 7 RSCAWSPSG-KLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECV 85 (281)
Q Consensus 7 ~~~~~~~~~-~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~ 85 (281)
....|+|++ .++++...++.|..|+..++... .+. ....+.++.|+|+|+++++. . ..|.+||...+.. ..+
T Consensus 52 egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~---~~~-~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~-~~~ 124 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNILERELHELHLASGRKT---VHA-LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVL-TLH 124 (326)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE---EEE-CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCE-EEE
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE---EEE-CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcE-EEE
Confidence 467899974 56677777889999998776432 222 34678999999999887765 3 3488898765542 222
Q ss_pred EeecC--CccceeEEEecCCCCeEEEEecC----CeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEE
Q 023500 86 SVLQG--HAQDVKMVQWHPTMDVLFSCSYD----NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV 159 (281)
Q Consensus 86 ~~~~~--~~~~v~~v~~~p~~~~l~s~s~d----~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 159 (281)
..... ....++.+.++|++.++++...+ ....+|.+... . ...+.. +......++|+|+++.|+
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g---~---~~~~~~----~~~~~~~i~~s~dg~~ly 194 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKG---K---VTKLFA----DISIPNSICFSPDGTTGY 194 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETT---E---EEEEEE----EESSEEEEEECTTSCEEE
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCC---c---EEEeeC----CCcccCCeEEcCCCCEEE
Confidence 11111 12357899999999977765432 23444443311 1 111111 123467899999998665
Q ss_pred Ee-eCCCcEEEEeCC--cc-ccccCCCCcccceeEEeecccCcceEEEEeCCCceeeec-CCCCcEEEEecccCCCcCCc
Q 023500 160 SC-SDDLTIKIWGAD--IT-RMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASG-AADDSVQFFVESKDDLIDGP 234 (281)
Q Consensus 160 s~-~~d~~i~~w~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~~~~ 234 (281)
.+ +.++.|.+|+.+ .+ ... ..+....+. ........+.++++|.+..+ ..++.+..|+... .
T Consensus 195 v~~~~~~~I~~~d~~~~~Gl~~~------~~~~~~~~~-~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g------~ 261 (326)
T 2ghs_A 195 FVDTKVNRLMRVPLDARTGLPTG------KAEVFIDST-GIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDG------N 261 (326)
T ss_dssp EEETTTCEEEEEEBCTTTCCBSS------CCEEEEECT-TSSSEEEEEEECTTSCEEEEEETTTEEEEECTTC------C
T ss_pred EEECCCCEEEEEEcccccCCccc------CceEEEECC-CCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCC------C
Confidence 44 557889999864 21 110 001111111 11234566778877754443 3456777785421 1
Q ss_pred cceeeeeeccCCCCCeeEEEEc-CCCCeeEEEeCCCC
Q 023500 235 SYKMLLKKEKAHDMDVNSVQWS-PGERRLLASASDDG 270 (281)
Q Consensus 235 ~~~~~~~~~~~h~~~v~~~~~~-~~~~~~~~s~~~Dg 270 (281)
.......+...+++++|. +++..++++.+.++
T Consensus 262 ----~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 262 ----HIARYEVPGKQTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp ----EEEEEECSCSBEEEEEEESTTSCEEEEEEBCTT
T ss_pred ----EEEEEECCCCCcEEEEEecCCCCEEEEEecCCC
Confidence 112222344569999998 87777777766553
No 204
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.20 E-value=5.8e-09 Score=94.05 Aligned_cols=238 Identities=13% Similarity=0.083 Sum_probs=129.4
Q ss_pred cCCCCEEEEeeCCCc---EEEEecC-----CCceeeeee----ecCCCCCeeEEEEcCCCCEEEEecCC-----CcEEEE
Q 023500 12 SPSGKLLATASFDAT---TCIWEDV-----GGDYECVAT----LEGHENEVKSVSWNASGTLLATCGRD-----KSVWIW 74 (281)
Q Consensus 12 ~~~~~~l~tg~~d~~---i~lw~~~-----~~~~~~~~~----~~~h~~~v~~v~~~~~~~~l~s~~~d-----~~v~~w 74 (281)
+|+|++++....++. -.||... ++....+.. -.+|...+..++|||||++|+.++.+ .+|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 489998876665543 5566532 333222211 12344468889999999998876543 469999
Q ss_pred EecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEecCCe--------------EEEEeCCCCCCCCceeeeeeeeccC
Q 023500 75 EVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT--------------IKVWWAEDTDSDNWHCVQTISESNN 140 (281)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~--------------v~~w~~~~~~~~~~~~~~~~~~~~~ 140 (281)
|+..+..... ..+...+..+.|+|+ +.|+.++.|.. |++|++....... ..+ . ...
T Consensus 195 dl~tg~~~~~----~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~-~lv---~-~~~ 264 (741)
T 1yr2_A 195 GVADGKPLAD----ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSAD-QPV---F-ATP 264 (741)
T ss_dssp ETTTCCEEEE----EEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGC-EEE---E-CCT
T ss_pred ECCCCCCCCc----cCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhC-EEE---e-ccC
Confidence 9977653221 111222467899999 98888777654 8888775432111 111 1 112
Q ss_pred CccccEEEEEEccCCCEEEEeeCCC-----cEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecC
Q 023500 141 GHSSTIWALSFNAKGDKLVSCSDDL-----TIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGA 215 (281)
Q Consensus 141 ~h~~~v~~~~~~~~~~~l~s~~~d~-----~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 215 (281)
.++..+..+.|+|+|++|+..+.++ .|.+||.+..... .++ .+..........+. ..+..++..+
T Consensus 265 ~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~------~~~---~l~~~~~~~~~~~~-~dg~~l~~~s 334 (741)
T 1yr2_A 265 ELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIG------PVT---ALIPDLKAQWDFVD-GVGDQLWFVS 334 (741)
T ss_dssp TCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEEC------CCE---EEECSSSSCEEEEE-EETTEEEEEE
T ss_pred CCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCc------ccE---EecCCCCceEEEEe-ccCCEEEEEE
Confidence 3334578899999999888776543 7888876532100 001 11111111111222 2223333222
Q ss_pred C----CCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEcc
Q 023500 216 A----DDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 278 (281)
Q Consensus 216 ~----d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~ 278 (281)
. +..+..++..... .....+. ..+...+..++|. +..++++...|+..+||.+.
T Consensus 335 ~~~~~~~~l~~~d~~~~~----~~~~~l~---~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 335 GDGAPLKKIVRVDLSGST----PRFDTVV---PESKDNLESVGIA--GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp CTTCTTCEEEEEECSSSS----CEEEEEE---CCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEE
T ss_pred CCCCCCCEEEEEeCCCCc----cccEEEe---cCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEe
Confidence 2 3446666543210 1111221 2344456677887 34688899999988888654
No 205
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.19 E-value=7e-08 Score=83.96 Aligned_cols=254 Identities=13% Similarity=0.060 Sum_probs=148.2
Q ss_pred ceeEEEEcCCCCEEEEeeCCCcEEEEecC--CCceeeeeeecCCCCCeeEEEEc----CCCCEEEEec-CCCcEEEEEec
Q 023500 5 TVRSCAWSPSGKLLATASFDATTCIWEDV--GGDYECVATLEGHENEVKSVSWN----ASGTLLATCG-RDKSVWIWEVM 77 (281)
Q Consensus 5 ~i~~~~~~~~~~~l~tg~~d~~i~lw~~~--~~~~~~~~~~~~h~~~v~~v~~~----~~~~~l~s~~-~d~~v~~w~~~ 77 (281)
.+..+.|+|||+++.+++.|+.|.+||.. +.+ .+..+... ..-..++|+ |+|+++++++ .++++.++|..
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~--~v~~i~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~ 274 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPT--TVAEIKIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGE 274 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCC--EEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETT
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCc--EeEEEecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECC
Confidence 34578999999999999999999999985 443 34555432 234689999 6999877665 45899999976
Q ss_pred CCCeeEEeEeec----C---C-ccceeEEEecCCCCe-EEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEE
Q 023500 78 PGNEFECVSVLQ----G---H-AQDVKMVQWHPTMDV-LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWA 148 (281)
Q Consensus 78 ~~~~~~~~~~~~----~---~-~~~v~~v~~~p~~~~-l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 148 (281)
..+....+.+.. + | ...+..+..++++.. +++...+|.|.+++...... ..+..+. .......
T Consensus 275 t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~---~~v~~i~-----~~~~~~d 346 (567)
T 1qks_A 275 TLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNN---LKTTEIS-----AERFLHD 346 (567)
T ss_dssp TCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSE---EEEEEEE-----CCSSEEE
T ss_pred CCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCcc---ceeeeee-----ccccccC
Confidence 554332222110 0 1 225677778887654 55666778999988765321 1122221 1233567
Q ss_pred EEEccCCCEEEEee-CCCcEEEEeCCccccccCCCCcccceeEE-eecccCcceEEEEeCCC-ce-eeecC-CCCcEEEE
Q 023500 149 LSFNAKGDKLVSCS-DDLTIKIWGADITRMQSGDGYASWRHLCT-ISGYHDRTIFSVHWSRE-GI-IASGA-ADDSVQFF 223 (281)
Q Consensus 149 ~~~~~~~~~l~s~~-~d~~i~~w~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~-~~-~~~~~-~d~~~~~~ 223 (281)
+.|+|++++|+++. .++.|.++|.+..+.... ... -...|...-..+ ++|+ +. +++.. .++.+.++
T Consensus 347 ~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~--------i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvi 417 (567)
T 1qks_A 347 GGLDGSHRYFITAANARNKLVVIDTKEGKLVAI--------EDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALI 417 (567)
T ss_dssp EEECTTSCEEEEEEGGGTEEEEEETTTTEEEEE--------EECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEE
T ss_pred ceECCCCCEEEEEeCCCCeEEEEECCCCcEEEE--------EeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEe
Confidence 89999999876654 578999999875432110 000 000121111112 2454 43 34433 45788888
Q ss_pred ecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCC------CCeEEEEEcccC
Q 023500 224 VESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASD------DGMIKIWELANT 280 (281)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~------Dg~v~iw~~~~~ 280 (281)
+........ ...+.. .........-..+..+|++++++++... .+.|.++|+.+.
T Consensus 418 d~~~~~~~~-~~~kvv-~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 418 GTDPEGHPD-NAWKIL-DSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp ECCTTTCTT-TBTSEE-EEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred cCCCCCCcc-ccCEEE-EEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 664321110 011222 2222222222447789999888775521 358999998753
No 206
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.17 E-value=2.1e-08 Score=89.69 Aligned_cols=243 Identities=15% Similarity=0.096 Sum_probs=132.4
Q ss_pred cceeEEEEcCCCCEEEE-----eeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCC---------
Q 023500 4 RTVRSCAWSPSGKLLAT-----ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDK--------- 69 (281)
Q Consensus 4 ~~i~~~~~~~~~~~l~t-----g~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~--------- 69 (281)
..+..++|||||++||- |+....|++||..+++.... .+.+ .....++|+ ||+.|+.++.+.
T Consensus 129 ~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~ 204 (693)
T 3iuj_A 129 TALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKD--VKFSGISWL-GNEGFFYSSYDKPDGSELSAR 204 (693)
T ss_dssp CEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEE--EESCCCEEE-TTTEEEEEESSCCC-------
T ss_pred EEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCC--ceeccEEEe-CCCEEEEEEecCccccccccc
Confidence 35778899999998883 33335799999988764322 2221 113567899 999888887764
Q ss_pred ----cEEEEEecCCCe-eEEeEeecC-CccceeEEEecCCCCeEEEEec----CCeEEEEeCCCCCCCCceeeeeeeecc
Q 023500 70 ----SVWIWEVMPGNE-FECVSVLQG-HAQDVKMVQWHPTMDVLFSCSY----DNTIKVWWAEDTDSDNWHCVQTISESN 139 (281)
Q Consensus 70 ----~v~~w~~~~~~~-~~~~~~~~~-~~~~v~~v~~~p~~~~l~s~s~----d~~v~~w~~~~~~~~~~~~~~~~~~~~ 139 (281)
.|++|++..... ...+..... |......+.|+|++++|+..+. ++.|++++++.... . ...+.
T Consensus 205 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~-~---~~~l~--- 277 (693)
T 3iuj_A 205 TDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENA-P---LLTVQ--- 277 (693)
T ss_dssp CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTC-C---CEEEE---
T ss_pred CCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCC-c---eEEEe---
Confidence 388898765432 122333333 4445678999999997654332 24888888765421 1 12222
Q ss_pred CCccccEEEEEEccCCCEEEEee-CC---CcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecC
Q 023500 140 NGHSSTIWALSFNAKGDKLVSCS-DD---LTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGA 215 (281)
Q Consensus 140 ~~h~~~v~~~~~~~~~~~l~s~~-~d---~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 215 (281)
.+....... ++++++.|+..+ .+ +.|..++++.... ..|+. +.......+ .+++..+.+++...
T Consensus 278 -~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~------~~~~~---l~~~~~~~~-~~s~~g~~lv~~~~ 345 (693)
T 3iuj_A 278 -GDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGP------AHWRD---LIPERQQVL-TVHSGSGYLFAEYM 345 (693)
T ss_dssp -CSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCG------GGCEE---EECCCSSCE-EEEEETTEEEEEEE
T ss_pred -CCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCc------cccEE---EecCCCCEE-EEEEECCEEEEEEE
Confidence 122223333 566666554443 33 4566676653221 01221 111122333 44444444555555
Q ss_pred CCCc--EEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCC---CCeEEEEEcc
Q 023500 216 ADDS--VQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASD---DGMIKIWELA 278 (281)
Q Consensus 216 ~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~---Dg~v~iw~~~ 278 (281)
.++. +++++... .. ...........+..+.+++++..++.+.+. -+.|..||+.
T Consensus 346 ~~g~~~l~~~d~~g------~~---~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~ 404 (693)
T 3iuj_A 346 VDATARVEQFDYEG------KR---VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPK 404 (693)
T ss_dssp ETTEEEEEEECTTS------CE---EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred ECCeeEEEEEECCC------Ce---eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECC
Confidence 6664 44553321 11 111111223446667778877766555443 2678888764
No 207
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.13 E-value=2.7e-07 Score=76.21 Aligned_cols=248 Identities=10% Similarity=-0.015 Sum_probs=126.8
Q ss_pred EEEEcCCCCEEEEee----------CCCcEEEEecCCCceeeeeeecCC-------CCCeeEEEEcCCCCEEEEecC--C
Q 023500 8 SCAWSPSGKLLATAS----------FDATTCIWEDVGGDYECVATLEGH-------ENEVKSVSWNASGTLLATCGR--D 68 (281)
Q Consensus 8 ~~~~~~~~~~l~tg~----------~d~~i~lw~~~~~~~~~~~~~~~h-------~~~v~~v~~~~~~~~l~s~~~--d 68 (281)
.++++|||+++..+. .++.|.+||..+.+. +..+.-- ...-..+.|+|||++|+.+.. +
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~--~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~ 147 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLP--IADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAG 147 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcE--EEEEECCCccccccCCCccceEECCCCCEEEEEecCCC
Confidence 689999999887775 367899999876543 3322110 112347899999999988764 5
Q ss_pred CcEEEEEecCCCeeEEeEe-ecCCccceeEEEecCCC-CeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccE
Q 023500 69 KSVWIWEVMPGNEFECVSV-LQGHAQDVKMVQWHPTM-DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTI 146 (281)
Q Consensus 69 ~~v~~w~~~~~~~~~~~~~-~~~~~~~v~~v~~~p~~-~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v 146 (281)
++|.++| ...+. +.. +.. . .++.+.|.+ ..+++.+.|+++.+++. ...... .........+.....
T Consensus 148 ~~v~viD-~t~~~---~~~~i~~-~---~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~---~~~~~~~~~~~~p~~ 215 (373)
T 2mad_H 148 PAVGLVV-QGGSS---DDQLLSS-P---TCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAG---AGLVGAMLTAAQNLL 215 (373)
T ss_pred CeEEEEE-CCCCE---EeEEcCC-C---ceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEE---EEeccccccCCccee
Confidence 7899999 76543 222 221 1 124455654 35677788999988877 332110 000000001111111
Q ss_pred EEEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc--eeeecC---------
Q 023500 147 WALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGA--------- 215 (281)
Q Consensus 147 ~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~--------- 215 (281)
....+.+++..++..+.++.+.+.|......................++.......+.+++++ ++++..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~ 295 (373)
T 2mad_H 216 TQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHA 295 (373)
T ss_pred ecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccC
Confidence 234556665544444467788888774321110000000000000000011112224445543 233221
Q ss_pred CCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeC-CCCeEEEEEccc
Q 023500 216 ADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASAS-DDGMIKIWELAN 279 (281)
Q Consensus 216 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~-~Dg~v~iw~~~~ 279 (281)
..+.+.+++.... +. ..... .......++|+|+++.++.++. .++.|.+||+..
T Consensus 296 ~~~~V~VID~~t~--------~v-v~~i~-~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 296 AAKEVTSVTGLVG--------QT-SSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred CCCeEEEEECCCC--------EE-EEEEE-CCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 1234555544321 11 11111 1225788999999984444555 589999999864
No 208
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.05 E-value=2.2e-07 Score=74.19 Aligned_cols=162 Identities=14% Similarity=0.179 Sum_probs=104.1
Q ss_pred cceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecC--CCCCeeEEEEcCCCCEEEEecC---------CCcEE
Q 023500 4 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEG--HENEVKSVSWNASGTLLATCGR---------DKSVW 72 (281)
Q Consensus 4 ~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~--h~~~v~~v~~~~~~~~l~s~~~---------d~~v~ 72 (281)
..+.+++++|+|+++++. ++.|.+||..+++...+..... ....++.++++|+|++.++... ...-.
T Consensus 54 ~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~ 131 (297)
T 3g4e_A 54 APVSSVALRQSGGYVATI--GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGA 131 (297)
T ss_dssp SCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEE
T ss_pred CceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcE
Confidence 467899999999976653 5678899987776544433221 1234788999999997775432 23457
Q ss_pred EEEecCCCeeEEeEeecCCccceeEEEecCCCCeE-EEEecCCeEEEEeCC--CCCCCCceeeeeeeeccCCccccEEEE
Q 023500 73 IWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVL-FSCSYDNTIKVWWAE--DTDSDNWHCVQTISESNNGHSSTIWAL 149 (281)
Q Consensus 73 ~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l-~s~s~d~~v~~w~~~--~~~~~~~~~~~~~~~~~~~h~~~v~~~ 149 (281)
+|.+........ +..+....+.++|+|+++.+ ++.+.++.|.+|++. .......+....+ ..+...+..+
T Consensus 132 l~~~d~~g~~~~---~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~----~~~~~~p~g~ 204 (297)
T 3g4e_A 132 LYSLFPDHHVKK---YFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKL----EKEEQIPDGM 204 (297)
T ss_dssp EEEECTTSCEEE---EEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEEC----CGGGCEEEEE
T ss_pred EEEEECCCCEEE---EeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEEC----CCCCCCCCee
Confidence 777754432211 22223346789999999855 566667899999864 2211111111111 1223457789
Q ss_pred EEccCCCEEEEeeCCCcEEEEeCCc
Q 023500 150 SFNAKGDKLVSCSDDLTIKIWGADI 174 (281)
Q Consensus 150 ~~~~~~~~l~s~~~d~~i~~w~~~~ 174 (281)
++++++.+.++....+.|..||.+.
T Consensus 205 ~~d~~G~lwva~~~~~~v~~~d~~t 229 (297)
T 3g4e_A 205 CIDAEGKLWVACYNGGRVIRLDPVT 229 (297)
T ss_dssp EEBTTSCEEEEEETTTEEEEECTTT
T ss_pred EECCCCCEEEEEcCCCEEEEEcCCC
Confidence 9999998888877788899998753
No 209
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.05 E-value=1.3e-07 Score=75.78 Aligned_cols=201 Identities=11% Similarity=0.111 Sum_probs=120.6
Q ss_pred cceeEEEEcCC-CCEEEEeeCCCcEEEEecCCCceeee-eee-cC-CCCCeeEEEEcCCCCEEEEecCC-----------
Q 023500 4 RTVRSCAWSPS-GKLLATASFDATTCIWEDVGGDYECV-ATL-EG-HENEVKSVSWNASGTLLATCGRD----------- 68 (281)
Q Consensus 4 ~~i~~~~~~~~-~~~l~tg~~d~~i~lw~~~~~~~~~~-~~~-~~-h~~~v~~v~~~~~~~~l~s~~~d----------- 68 (281)
..+..++++++ |+++++.. .+.|.+|+.. ++.... ... .+ ....+.+++++|+|++.++...+
T Consensus 71 ~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~ 148 (314)
T 1pjx_A 71 GIPAGCQCDRDANQLFVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSM 148 (314)
T ss_dssp CCEEEEEECSSSSEEEEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTT
T ss_pred CCCceEEEecCCCcEEEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccc
Confidence 45788999999 77666554 3468889877 554322 111 11 12357899999999988877654
Q ss_pred ----CcEEEEEecCCCeeEEeEeecCCccceeEEEec----CCCCeE-EEEecCCeEEEEeCCCCCCCCceeeeeeeecc
Q 023500 69 ----KSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWH----PTMDVL-FSCSYDNTIKVWWAEDTDSDNWHCVQTISESN 139 (281)
Q Consensus 69 ----~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~----p~~~~l-~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~ 139 (281)
+.|..++.. ..... +..+......+.|+ |+++.+ ++...++.|.+|+..... .......+. ..
T Consensus 149 ~~~~~~l~~~~~~--g~~~~---~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g--~~~~~~~~~-~~ 220 (314)
T 1pjx_A 149 QEKFGSIYCFTTD--GQMIQ---VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPA--KIENKKVWG-HI 220 (314)
T ss_dssp SSSCEEEEEECTT--SCEEE---EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETT--EEEEEEEEE-EC
T ss_pred cCCCCeEEEECCC--CCEEE---eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCC--ccccceEEE-EC
Confidence 345444432 22211 11223346788999 998654 555667899999765211 000011111 11
Q ss_pred CCcc-ccEEEEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCce--eeecCC
Q 023500 140 NGHS-STIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI--IASGAA 216 (281)
Q Consensus 140 ~~h~-~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~ 216 (281)
.++. ..+..+++++++.++++...++.|..||.+.++.. ..+ ..+...+.++.+++++. +++...
T Consensus 221 ~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~-----------~~~-~~~~~~~~~i~~~~dg~~l~v~~~~ 288 (314)
T 1pjx_A 221 PGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPK-----------MRI-RCPFEKPSNLHFKPQTKTIFVTEHE 288 (314)
T ss_dssp CCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCS-----------EEE-ECSSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEe-----------EEE-eCCCCCceeEEECCCCCEEEEEeCC
Confidence 2232 45778999999988888777888999987532210 111 12335677888888764 445555
Q ss_pred CCcEEEEecc
Q 023500 217 DDSVQFFVES 226 (281)
Q Consensus 217 d~~~~~~~~~ 226 (281)
++.+..++..
T Consensus 289 ~~~l~~~~~~ 298 (314)
T 1pjx_A 289 NNAVWKFEWQ 298 (314)
T ss_dssp TTEEEEEECS
T ss_pred CCeEEEEeCC
Confidence 6677777554
No 210
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.04 E-value=2.4e-07 Score=75.19 Aligned_cols=220 Identities=10% Similarity=0.003 Sum_probs=126.3
Q ss_pred CCCcEEEEecCCCceeeeeee----cC--CCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEEeEeecCCcccee
Q 023500 23 FDATTCIWEDVGGDYECVATL----EG--HENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVK 96 (281)
Q Consensus 23 ~d~~i~lw~~~~~~~~~~~~~----~~--h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~~~~~~~v~ 96 (281)
+++.|.++|..++++. ..+ .+ .......+.+. +++..++...++.|.+||....+.. ..+. ......
T Consensus 15 ~~~~l~~~d~~t~~~~--~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~---~~i~-~~~~p~ 87 (328)
T 3dsm_A 15 SNATLSYYDPATCEVE--NEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEV---GRIT-GFTSPR 87 (328)
T ss_dssp CCBEEEEEETTTTEEE--CSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEE---EEEE-CCSSEE
T ss_pred CCceEEEEECCCCEEh--hhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEE---EEcC-CCCCCc
Confidence 4789999999887642 211 11 11345677774 4556666677899999998766542 2332 234578
Q ss_pred EEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeecc-CCccccEEEEEEccCCCEEEEee-CCCcEEEEeCCc
Q 023500 97 MVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESN-NGHSSTIWALSFNAKGDKLVSCS-DDLTIKIWGADI 174 (281)
Q Consensus 97 ~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~-~d~~i~~w~~~~ 174 (281)
.++++|++.++++...++.|.+||..... ....+.... .++...+..+++ .++..+++.. .++.|.++|.+.
T Consensus 88 ~i~~~~~g~lyv~~~~~~~v~~iD~~t~~-----~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t 161 (328)
T 3dsm_A 88 YIHFLSDEKAYVTQIWDYRIFIINPKTYE-----ITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTET 161 (328)
T ss_dssp EEEEEETTEEEEEEBSCSEEEEEETTTTE-----EEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTT
T ss_pred EEEEeCCCeEEEEECCCCeEEEEECCCCe-----EEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCC
Confidence 89998988655665589999999876532 222222111 011113445666 4444444443 488999999864
Q ss_pred cccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecCC-C----------CcEEEEecccCCCcCCccceeeeeec
Q 023500 175 TRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAA-D----------DSVQFFVESKDDLIDGPSYKMLLKKE 243 (281)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-d----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (281)
.+.. ..+.. ......+.+++++.+..++. + +.+.+++..... . ...+.
T Consensus 162 ~~~~-----------~~i~~--g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~-----v-~~~~~-- 220 (328)
T 3dsm_A 162 DKVV-----------DELTI--GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFT-----V-EKQFK-- 220 (328)
T ss_dssp TEEE-----------EEEEC--SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE-----E-EEEEE--
T ss_pred CeEE-----------EEEEc--CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCe-----E-EEEEe--
Confidence 3321 11111 12234566677765444333 2 567777554321 1 11111
Q ss_pred cCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 244 KAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 244 ~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
.......+.++|+|+++.++++.+ .|.+||...
T Consensus 221 ~~~g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t 253 (328)
T 3dsm_A 221 FKLGDWPSEVQLNGTRDTLYWINN---DIWRMPVEA 253 (328)
T ss_dssp CCTTCCCEEEEECTTSCEEEEESS---SEEEEETTC
T ss_pred cCCCCCceeEEEecCCCEEEEEcc---EEEEEECCC
Confidence 111235789999998887766544 788898754
No 211
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.96 E-value=2.3e-07 Score=76.34 Aligned_cols=248 Identities=15% Similarity=0.056 Sum_probs=126.9
Q ss_pred EEEEcCCCCEEEEee----------CCCcEEEEecCCCceeeeeeecCC-------CCCeeEEEEcCCCCEEEEecC--C
Q 023500 8 SCAWSPSGKLLATAS----------FDATTCIWEDVGGDYECVATLEGH-------ENEVKSVSWNASGTLLATCGR--D 68 (281)
Q Consensus 8 ~~~~~~~~~~l~tg~----------~d~~i~lw~~~~~~~~~~~~~~~h-------~~~v~~v~~~~~~~~l~s~~~--d 68 (281)
.++++|||+++..++ .++.|.+||..+.+. +..+.-. ...-..+.|+|||++++.+.. +
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v--~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~ 159 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLP--TADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPA 159 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE--EEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSS
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeE--EEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCC
Confidence 389999999776654 367899999887753 3333211 113456899999999887753 6
Q ss_pred CcEEEEEecCCCeeEEeEeecCCccceeEEEecCC-CCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEE
Q 023500 69 KSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT-MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIW 147 (281)
Q Consensus 69 ~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~-~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 147 (281)
++|.++|+...+. +..+.-. . |....|. ...+++.+.||++.+.+....... ..........-...+.
T Consensus 160 ~~VsVID~~t~~v---v~tI~v~--g--~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v----~~~~~~~~~~~~~~~~ 228 (386)
T 3sjl_D 160 PAVGVVDLEGKAF---KRMLDVP--D--CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP----EITHTEVFHPEDEFLI 228 (386)
T ss_dssp CEEEEEETTTTEE---EEEEECC--S--EEEEEEEETTEEEEEETTSCEEEEECCSSSCC----EEEECCCCSCTTSCBC
T ss_pred CeEEEEECCCCcE---EEEEECC--C--cceeecCCCceeEEECCCCCEEEEECCCCCeE----EEeecceecccccccc
Confidence 8999999976543 2222211 1 1122243 346778888898888777542211 0000000000111121
Q ss_pred -EEEEc-cCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc--eeeecC-------C
Q 023500 148 -ALSFN-AKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGA-------A 216 (281)
Q Consensus 148 -~~~~~-~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~-------~ 216 (281)
...|. +++++++ .+.+|.+.+.|......................+........+.+++++ ++++.. .
T Consensus 229 ~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk 307 (386)
T 3sjl_D 229 NHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHK 307 (386)
T ss_dssp SCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTT
T ss_pred ccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccC
Confidence 23554 5675544 4457889999875332111100000000000000000111112223322 233211 1
Q ss_pred C--CcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCC-eeEEEeCCCCeEEEEEccc
Q 023500 217 D--DSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGER-RLLASASDDGMIKIWELAN 279 (281)
Q Consensus 217 d--~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~~~s~~~Dg~v~iw~~~~ 279 (281)
+ +.+.+++.+.. +.......+ .+++.++++++++ .++++...++.|.++|...
T Consensus 308 ~~~~~V~viD~~t~--------kv~~~i~vg--~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t 363 (386)
T 3sjl_D 308 TASRFVVVLDAKTG--------ERLAKFEMG--HEIDSINVSQDEKPLLYALSTGDKTLYIHDAES 363 (386)
T ss_dssp SCEEEEEEEETTTC--------CEEEEEEEE--EEECEEEECSSSSCEEEEEETTTTEEEEEETTT
T ss_pred CCCCEEEEEECCCC--------eEEEEEECC--CCcceEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 1 23444433321 111111112 2578999999986 5666677799999999764
No 212
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.93 E-value=1.7e-06 Score=70.11 Aligned_cols=160 Identities=14% Similarity=0.033 Sum_probs=99.6
Q ss_pred cceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecC-C-CCCeeEEEEcCCCCEEEEecCC----CcEEEEEec
Q 023500 4 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEG-H-ENEVKSVSWNASGTLLATCGRD----KSVWIWEVM 77 (281)
Q Consensus 4 ~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~-h-~~~v~~v~~~~~~~~l~s~~~d----~~v~~w~~~ 77 (281)
..+.+++++|+|+++++. .+ .|.+||..+++...+..... . ...++++.++|+|++.++...+ ....+|.+.
T Consensus 90 ~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~ 167 (326)
T 2ghs_A 90 FMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA 167 (326)
T ss_dssp SCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE
T ss_pred CcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe
Confidence 457889999999988754 34 48899987776543332211 1 2357899999999977665422 345566654
Q ss_pred CCCeeEEeEeecCCccceeEEEecCCCCeE-EEEecCCeEEEEeCC--CC-CCCCceeeeeeeeccCCccccEEEEEEcc
Q 023500 78 PGNEFECVSVLQGHAQDVKMVQWHPTMDVL-FSCSYDNTIKVWWAE--DT-DSDNWHCVQTISESNNGHSSTIWALSFNA 153 (281)
Q Consensus 78 ~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l-~s~s~d~~v~~w~~~--~~-~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 153 (281)
...... +..+....+.++|+|+++.+ ++.+.++.|.+|+.+ .. .....+....+ ......+..+.+++
T Consensus 168 -~g~~~~---~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~----~~~~~~p~gi~~d~ 239 (326)
T 2ghs_A 168 -KGKVTK---LFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDS----TGIKGGMDGSVCDA 239 (326)
T ss_dssp -TTEEEE---EEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEEC----TTSSSEEEEEEECT
T ss_pred -CCcEEE---eeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEEC----CCCCCCCCeeEECC
Confidence 332221 22223346789999999865 455567899999875 22 11111111111 12234567889999
Q ss_pred CCCEEEEeeCCCcEEEEeCC
Q 023500 154 KGDKLVSCSDDLTIKIWGAD 173 (281)
Q Consensus 154 ~~~~l~s~~~d~~i~~w~~~ 173 (281)
++.+.++...++.|..|+.+
T Consensus 240 ~G~lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 240 EGHIWNARWGEGAVDRYDTD 259 (326)
T ss_dssp TSCEEEEEETTTEEEEECTT
T ss_pred CCCEEEEEeCCCEEEEECCC
Confidence 99877776667789999763
No 213
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.93 E-value=6.5e-07 Score=70.77 Aligned_cols=155 Identities=14% Similarity=0.173 Sum_probs=106.2
Q ss_pred ceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCC-CCCeeEEEEcCCCCEEEEecC-CCcEEEEEecCCCee
Q 023500 5 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGH-ENEVKSVSWNASGTLLATCGR-DKSVWIWEVMPGNEF 82 (281)
Q Consensus 5 ~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h-~~~v~~v~~~~~~~~l~s~~~-d~~v~~w~~~~~~~~ 82 (281)
.+.++++.|+|++|+ +.++.+..||. +++. +..+..+ ...+.++.+.|+|+.+++.+. ++.+..++. .++..
T Consensus 38 ~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~--~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l 111 (276)
T 3no2_A 38 ECNSVAATKAGEILF--SYSKGAKMITR-DGRE--LWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVL 111 (276)
T ss_dssp CCCEEEECTTSCEEE--ECBSEEEEECT-TSCE--EEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEE
T ss_pred CCcCeEECCCCCEEE--eCCCCEEEECC-CCCE--EEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEE
Confidence 578899999999998 34678999998 5543 4445543 357889999999999999877 666666653 33322
Q ss_pred EEeEee---cCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEE
Q 023500 83 ECVSVL---QGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV 159 (281)
Q Consensus 83 ~~~~~~---~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 159 (281)
.....- ..+......+...++++++++.+.++.|.+|+.+ .. .+-++.. ...+.++...+++..++
T Consensus 112 ~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~-----~~w~~~~-----~~~~~~~~~~~~g~~~v 180 (276)
T 3no2_A 112 SKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQ-----LLNSVKL-----SGTPFSSAFLDNGDCLV 180 (276)
T ss_dssp EEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SC-----EEEEEEC-----SSCCCEEEECTTSCEEE
T ss_pred EEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CC-----EEEEEEC-----CCCccceeEcCCCCEEE
Confidence 111110 1222345667788999999999999999999765 22 1222221 12345677788999999
Q ss_pred EeeCCCcEEEEeCCccc
Q 023500 160 SCSDDLTIKIWGADITR 176 (281)
Q Consensus 160 s~~~d~~i~~w~~~~~~ 176 (281)
++..++.|..+|.+.++
T Consensus 181 ~~~~~~~v~~~d~~tG~ 197 (276)
T 3no2_A 181 ACGDAHCFVQLNLESNR 197 (276)
T ss_dssp ECBTTSEEEEECTTTCC
T ss_pred EeCCCCeEEEEeCcCCc
Confidence 99888889999876443
No 214
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.87 E-value=2.1e-07 Score=75.96 Aligned_cols=227 Identities=11% Similarity=0.060 Sum_probs=127.9
Q ss_pred ccceeEEEEcCCCCEEEEeeC-----CCcEEEEecCCCceeeeeeec----CCCCCeeEEEEcCCC-CEEEEec---CCC
Q 023500 3 TRTVRSCAWSPSGKLLATASF-----DATTCIWEDVGGDYECVATLE----GHENEVKSVSWNASG-TLLATCG---RDK 69 (281)
Q Consensus 3 ~~~i~~~~~~~~~~~l~tg~~-----d~~i~lw~~~~~~~~~~~~~~----~h~~~v~~v~~~~~~-~~l~s~~---~d~ 69 (281)
-..+..++++++|+++++-.. ++.|.+||..+++......+. .+......++++|++ ..+++.. .++
T Consensus 66 ~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~ 145 (343)
T 2qe8_A 66 FDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKA 145 (343)
T ss_dssp CSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGC
T ss_pred eeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCC
Confidence 356889999999998776543 578999998777532222221 123456899999864 4456655 678
Q ss_pred cEEEEEecCCCeeEEeEeecCCcccee-EEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEE
Q 023500 70 SVWIWEVMPGNEFECVSVLQGHAQDVK-MVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWA 148 (281)
Q Consensus 70 ~v~~w~~~~~~~~~~~~~~~~~~~~v~-~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 148 (281)
.|.+||+..+.. .+.+.+|..... ...+.+++..+.+.+.+++++.|. ..+..
T Consensus 146 ~i~v~d~~~g~~---~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~-----------------------~~~~g 199 (343)
T 2qe8_A 146 ALIRVDLQTGLA---ARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPH-----------------------LGVNG 199 (343)
T ss_dssp EEEEEETTTCCE---EEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCC-----------------------CCEEE
T ss_pred eEEEEECCCCCE---EEEecCCCcccccccceeECCEEEEeccCCCceecee-----------------------cccce
Confidence 999999875542 333444321110 133445566666666777766551 12567
Q ss_pred EEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcc---cceeEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEEe
Q 023500 149 LSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYAS---WRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFV 224 (281)
Q Consensus 149 ~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~~ 224 (281)
++|+|+++.|+.+..++. ++|.++...... ..... ....... + +......++++++| ++++...++.+..|+
T Consensus 200 ia~s~dg~~ly~~~~~~~-~l~~~~~~~~~~-~~~~~~~~~~~~~~~-g-~~g~pdgia~d~~G~l~va~~~~~~V~~~d 275 (343)
T 2qe8_A 200 IVLDAENEWLYLSPMHST-SMYRIKSADLSN-LQLTDAELGSKIERY-S-EKPICDGISIDKDHNIYVGDLAHSAIGVIT 275 (343)
T ss_dssp EEECTTSCEEEEEESSCS-EEEEEEHHHHTC-TTCCHHHHHTTCEEE-E-ECCSCSCEEECTTCCEEEEEGGGTEEEEEE
T ss_pred eEeccCCCEEEEEeCCCC-eEEEEEHHHhcC-CCCChhhhhcceEec-c-cCCCCceEEECCCCCEEEEccCCCeEEEEE
Confidence 999999998888877663 455433211000 00000 0000000 0 11123446667766 455666677888897
Q ss_pred cccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCC
Q 023500 225 ESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASD 268 (281)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~ 268 (281)
.... . ...+.. . .+-..+.+++|.+++. ++++.+.
T Consensus 276 ~~~G-----~-~~~~~~-~-~~~~~p~~va~~~~g~-l~v~~~~ 310 (343)
T 2qe8_A 276 SADR-----A-YKLLVT-D-EKLSWTDSFNFGSDGY-LYFDCNQ 310 (343)
T ss_dssp TTTT-----E-EEEEEE-C-GGGSCEEEEEECTTSC-EEEEECC
T ss_pred CCCC-----C-EEEEEE-C-CceecCCeeEECCCCc-EEEEeCc
Confidence 6211 1 111211 1 1234588999999764 6666553
No 215
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.86 E-value=4e-07 Score=81.47 Aligned_cols=204 Identities=12% Similarity=0.125 Sum_probs=112.6
Q ss_pred CCCCCeeEEEEcCCCCEEE-----EecCCCcEEEEEecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEecCC-----
Q 023500 45 GHENEVKSVSWNASGTLLA-----TCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN----- 114 (281)
Q Consensus 45 ~h~~~v~~v~~~~~~~~l~-----s~~~d~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~----- 114 (281)
+|...+..++|||||++|+ .|+.+.+|++||+..++.... .+. ......+.|+ +++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~--~~~--~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET--PLK--DVKFSGISWL-GNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE--EEE--EEESCCCEEE-TTTEEEEEESSCCC---
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc--ccC--CceeccEEEe-CCCEEEEEEecCccccc
Confidence 3556788899999999887 344456899999987653221 111 1113578899 999988888774
Q ss_pred --------eEEEEeCCCCCCCCceeeeeeeeccCC-ccccEEEEEEccCCCEEEEee----CCCcEEEEeCCccccccCC
Q 023500 115 --------TIKVWWAEDTDSDNWHCVQTISESNNG-HSSTIWALSFNAKGDKLVSCS----DDLTIKIWGADITRMQSGD 181 (281)
Q Consensus 115 --------~v~~w~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~----~d~~i~~w~~~~~~~~~~~ 181 (281)
.|++|++....... ..+.. ... |...+..+.|+|++++|+... .+..+.++|.+....
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~~-~~v~~----~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~---- 271 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQEDD-RLVFG----AIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENA---- 271 (693)
T ss_dssp ----CCCCEEEEEETTSCGGGC-EEEES----CSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTC----
T ss_pred ccccCCCcEEEEEECCCCcccc-eEEEe----cCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCC----
Confidence 48888876543211 11111 112 344567889999999775433 234788887653210
Q ss_pred CCcccceeEEeecccCcceEE-EEeCCCceeeecCCC---CcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcC
Q 023500 182 GYASWRHLCTISGYHDRTIFS-VHWSREGIIASGAAD---DSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSP 257 (281)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~d---~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 257 (281)
.++. +.. +...... +....+.+++....+ ..+..++...... ..... ...|...+. .|++
T Consensus 272 ---~~~~---l~~-~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~---~~~~~----l~~~~~~~~--~~s~ 335 (693)
T 3iuj_A 272 ---PLLT---VQG-DLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGP---AHWRD----LIPERQQVL--TVHS 335 (693)
T ss_dssp ---CCEE---EEC-SSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCG---GGCEE----EECCCSSCE--EEEE
T ss_pred ---ceEE---EeC-CCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCc---cccEE----EecCCCCEE--EEEE
Confidence 0111 111 1111111 222223344444333 4555554432111 00111 123444444 7888
Q ss_pred CCCeeEEEeCCCC--eEEEEEcc
Q 023500 258 GERRLLASASDDG--MIKIWELA 278 (281)
Q Consensus 258 ~~~~~~~s~~~Dg--~v~iw~~~ 278 (281)
++..++++...|+ .|++|++.
T Consensus 336 ~g~~lv~~~~~~g~~~l~~~d~~ 358 (693)
T 3iuj_A 336 GSGYLFAEYMVDATARVEQFDYE 358 (693)
T ss_dssp ETTEEEEEEEETTEEEEEEECTT
T ss_pred ECCEEEEEEEECCeeEEEEEECC
Confidence 8877777777676 47777764
No 216
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.84 E-value=1.8e-06 Score=72.20 Aligned_cols=205 Identities=12% Similarity=0.082 Sum_probs=120.8
Q ss_pred CeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEecCC--eEEEEeCCCCCC
Q 023500 49 EVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN--TIKVWWAEDTDS 126 (281)
Q Consensus 49 ~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~--~v~~w~~~~~~~ 126 (281)
....++|+|+++++++...++.|+.||...+.. ...... ..... ++|+|+++.++++..++ .|.+++......
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~---~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKV---TTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEE---EEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEE---EEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce
Confidence 456899999999888888889999999864432 111222 22234 89999999988888766 677776543211
Q ss_pred CCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceE-EEEe
Q 023500 127 DNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIF-SVHW 205 (281)
Q Consensus 127 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~ 205 (281)
...+..........+.+++++|++..|+.+..++.|..||.+....... ... ...+....... .+.+
T Consensus 207 -----~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~------~~~-~~~g~~~~~P~~~ia~ 274 (409)
T 3hrp_A 207 -----PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI------KQL-ELSGSLGTNPGPYLIY 274 (409)
T ss_dssp -----EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE------EEC-CCCSCCCCSSCCEEEE
T ss_pred -----eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE------ecc-cccCCCCCCccccEEE
Confidence 1111111111234567899999555566677788899998763321100 000 00000001112 6777
Q ss_pred CC-Cc-eeeecCCCCcEEEEecccCCCcCCccceeeeeec-----------cCCCCCeeEEEEcCCCCeeEEEeC-CCCe
Q 023500 206 SR-EG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKE-----------KAHDMDVNSVQWSPGERRLLASAS-DDGM 271 (281)
Q Consensus 206 ~~-~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~h~~~v~~~~~~~~~~~~~~s~~-~Dg~ 271 (281)
++ ++ ++++-..++.++.++.... ........ ...-.....++++|++. ++++-. .++.
T Consensus 275 ~p~~g~lyv~d~~~~~I~~~~~~g~-------~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~ 346 (409)
T 3hrp_A 275 YFVDSNFYMSDQNLSSVYKITPDGE-------CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYC 346 (409)
T ss_dssp ETTTTEEEEEETTTTEEEEECTTCC-------EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCE
T ss_pred eCCCCEEEEEeCCCCEEEEEecCCC-------EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCE
Confidence 87 34 4555566777887754321 01111100 01123478899999876 777887 8899
Q ss_pred EEEEEcc
Q 023500 272 IKIWELA 278 (281)
Q Consensus 272 v~iw~~~ 278 (281)
|+.|++.
T Consensus 347 I~~~~~~ 353 (409)
T 3hrp_A 347 LRKLDIL 353 (409)
T ss_dssp EEEEETT
T ss_pred EEEEECC
Confidence 9999843
No 217
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.84 E-value=1.7e-07 Score=76.52 Aligned_cols=235 Identities=9% Similarity=0.002 Sum_probs=129.1
Q ss_pred ceeEEEEcCCCCEEEEee--CCCcEEEEecCCCceeee----eeecCCCCCeeEEEEcCCCCEEEEecC-----CCcEEE
Q 023500 5 TVRSCAWSPSGKLLATAS--FDATTCIWEDVGGDYECV----ATLEGHENEVKSVSWNASGTLLATCGR-----DKSVWI 73 (281)
Q Consensus 5 ~i~~~~~~~~~~~l~tg~--~d~~i~lw~~~~~~~~~~----~~~~~h~~~v~~v~~~~~~~~l~s~~~-----d~~v~~ 73 (281)
....++++|+|+++++.. .++.++||...++..... ....+|-..+.+++++|+|+++++... +..|.+
T Consensus 18 ~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~ 97 (343)
T 2qe8_A 18 APGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVA 97 (343)
T ss_dssp CEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEE
T ss_pred CcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEE
Confidence 567899999999998863 234356665443332111 111234567899999999887665433 578999
Q ss_pred EEecCCCeeEEeEeec----CCccceeEEEecCCC-CeEEEEe---cCCeEEEEeCCCCCCCCceeeeeeeeccCCcccc
Q 023500 74 WEVMPGNEFECVSVLQ----GHAQDVKMVQWHPTM-DVLFSCS---YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSST 145 (281)
Q Consensus 74 w~~~~~~~~~~~~~~~----~~~~~v~~v~~~p~~-~~l~s~s---~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~ 145 (281)
||+..++.... ..+. .+......+++.|++ ..+++.+ .++.|.+|+..... ..+.+ .+|...
T Consensus 98 ~d~~tg~~~~~-~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~-----~~r~~----~~~~~~ 167 (343)
T 2qe8_A 98 WDTLNNQLSRV-IYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGL-----AARVL----QGYPGI 167 (343)
T ss_dssp EETTTTEEEEE-EECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCC-----EEEEC----TTCTTT
T ss_pred EECCCCeEEEE-EECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCC-----EEEEe----cCCCcc
Confidence 99865542211 1121 123356889999864 4556655 67899999876432 11111 122111
Q ss_pred EE-EEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc-eeeecCCCCcEEEE
Q 023500 146 IW-ALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFF 223 (281)
Q Consensus 146 v~-~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~~~~~ 223 (281)
.. ...+.+++..+.+.+.++.++.|.. .+..+++++++ .+..+...+. ++|
T Consensus 168 ~~~~~~~~~~g~~~~~~~~~g~~~~~~~--------------------------~~~gia~s~dg~~ly~~~~~~~-~l~ 220 (343)
T 2qe8_A 168 APEDIDLVIDGVPVQIGQPDGTVIRPHL--------------------------GVNGIVLDAENEWLYLSPMHST-SMY 220 (343)
T ss_dssp SCCSCCCEETTEECBEECTTSCEECCCC--------------------------CEEEEEECTTSCEEEEEESSCS-EEE
T ss_pred cccccceeECCEEEEeccCCCceeceec--------------------------ccceeEeccCCCEEEEEeCCCC-eEE
Confidence 00 0234456666666677777665521 13456778776 3333333321 344
Q ss_pred ecccCCCcCCcc-ceeeee--eccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEc
Q 023500 224 VESKDDLIDGPS-YKMLLK--KEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 277 (281)
Q Consensus 224 ~~~~~~~~~~~~-~~~~~~--~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~ 277 (281)
.+....+..... ...... ...++......+++++++ .++++...++.|.+|+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G-~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 221 RIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDH-NIYVGDLAHSAIGVITS 276 (343)
T ss_dssp EEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTC-CEEEEEGGGTEEEEEET
T ss_pred EEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCC-CEEEEccCCCeEEEEEC
Confidence 332110000000 000000 001122345678999986 57888888899999997
No 218
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.79 E-value=2.4e-07 Score=77.46 Aligned_cols=249 Identities=12% Similarity=0.038 Sum_probs=126.8
Q ss_pred EEEEcCCCCEEEEee----------CCCcEEEEecCCCceeeeeeec-C-C-----CCCeeEEEEcCCCCEEEEecC--C
Q 023500 8 SCAWSPSGKLLATAS----------FDATTCIWEDVGGDYECVATLE-G-H-----ENEVKSVSWNASGTLLATCGR--D 68 (281)
Q Consensus 8 ~~~~~~~~~~l~tg~----------~d~~i~lw~~~~~~~~~~~~~~-~-h-----~~~v~~v~~~~~~~~l~s~~~--d 68 (281)
.++++|||+++..+. .++.|.++|..+.+. +..+. + - ...-..+.|+|||++++.+.. +
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~v--v~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~ 199 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLP--IADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPA 199 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE--EEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSS
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcE--EEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCC
Confidence 689999999776665 367899999877653 33332 1 0 122356889999999888764 5
Q ss_pred CcEEEEEecCCCeeEEeEeecCCccceeEEEecCCC-CeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEE
Q 023500 69 KSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTM-DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIW 147 (281)
Q Consensus 69 ~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~-~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 147 (281)
++|.+.|+...+.. ..+.-.. +....|++ ..+++.+.||++.+.+...... .......+. .+......
T Consensus 200 ~~VsVID~~t~kvv---~~I~v~g----~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v-~~~~~~~~~---v~~~p~~~ 268 (426)
T 3c75_H 200 PAVGVVDLEGKTFD---RMLDVPD----CYHIFPASPTVFYMNCRDGSLARVDFADGET-KVTNTEVFH---TEDELLIN 268 (426)
T ss_dssp CEEEEEETTTTEEE---EEEECCS----EEEEEEEETTEEEEEETTSSEEEEECCTTCC-EEEECCCCS---CTTSCBCS
T ss_pred CeEEEEECCCCeEE---EEEEcCC----ceeeccCCCcEEEEEcCCCCEEEEECCCCcE-EEEeeeeec---cCCCceee
Confidence 78999998765432 2222110 12233433 3456666677666655522110 000000000 01011112
Q ss_pred EEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCc--eeeecC---------C
Q 023500 148 ALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGA---------A 216 (281)
Q Consensus 148 ~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~---------~ 216 (281)
.+.|.+++..++.....+.+.+.|......................+........+.+++++ .+++.. .
T Consensus 269 ~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~ 348 (426)
T 3c75_H 269 HPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAA 348 (426)
T ss_dssp CCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSC
T ss_pred EeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCC
Confidence 35678888776666777888888864322110000000000000000000000113445443 233321 1
Q ss_pred CCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcCCCC-eeEEEeCCCCeEEEEEccc
Q 023500 217 DDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGER-RLLASASDDGMIKIWELAN 279 (281)
Q Consensus 217 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~~~s~~~Dg~v~iw~~~~ 279 (281)
.+.+.+++.... .....+ .-+ .....++|+|+++ .++++...++.|.++|+..
T Consensus 349 s~~VsVID~~T~-----kvv~~I---~vg--~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t 402 (426)
T 3c75_H 349 SRFVVVLNAETG-----ERINKI---ELG--HEIDSINVSQDAEPLLYALSAGTQTLHIYDAAT 402 (426)
T ss_dssp EEEEEEEETTTC-----CEEEEE---EEE--EEECEEEECCSSSCEEEEEETTTTEEEEEETTT
T ss_pred CCEEEEEECCCC-----eEEEEE---ECC--CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCC
Confidence 235666655432 111111 111 1477899999988 6665665799999999764
No 219
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.73 E-value=3.9e-06 Score=67.16 Aligned_cols=156 Identities=11% Similarity=0.046 Sum_probs=93.0
Q ss_pred cceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeee-eecCC-CCCeeEEEEcCCCCEEEE----ecC----------
Q 023500 4 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVA-TLEGH-ENEVKSVSWNASGTLLAT----CGR---------- 67 (281)
Q Consensus 4 ~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~-~~~~h-~~~v~~v~~~~~~~~l~s----~~~---------- 67 (281)
..+..++++++|+++++...++.|.+|+.. ++...+. ...+. ...++.+++.|+|++.+| |..
T Consensus 86 ~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~ 164 (305)
T 3dr2_A 86 AFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADP 164 (305)
T ss_dssp SCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCC
T ss_pred CccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccccccccccc
Confidence 457789999999988776666789999875 4433222 11211 134678999999998887 332
Q ss_pred ---CCcEEEEEecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEecC------CeEEEEeCCCCCCCCceeeeeeeec
Q 023500 68 ---DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYD------NTIKVWWAEDTDSDNWHCVQTISES 138 (281)
Q Consensus 68 ---d~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d------~~v~~w~~~~~~~~~~~~~~~~~~~ 138 (281)
.+.|..++...+.. ..+ . .....+.++|+|+++.++.+... +.|.+|++...... ....+...
T Consensus 165 ~~~~~~v~~~d~~~g~~-~~~---~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~---~~~~~~~~ 236 (305)
T 3dr2_A 165 ELAHHSVYRLPPDGSPL-QRM---A-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALH---DRRHFASV 236 (305)
T ss_dssp SSSCEEEEEECSSSCCC-EEE---E-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEE---EEEEEECC
T ss_pred ccCCCeEEEEcCCCCcE-EEE---e-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCcc---CCeEEEEC
Confidence 13444444432322 111 1 23346789999999977666554 68988877542200 01111111
Q ss_pred cCCccccEEEEEEccCCCEEEEeeCCCcEEEEeCC
Q 023500 139 NNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 173 (281)
Q Consensus 139 ~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~ 173 (281)
....+..+++++++.+.+ +..++ |.+|+.+
T Consensus 237 ---~~~~pdgi~~d~~G~lwv-~~~~g-v~~~~~~ 266 (305)
T 3dr2_A 237 ---PDGLPDGFCVDRGGWLWS-SSGTG-VCVFDSD 266 (305)
T ss_dssp ---SSSCCCSEEECTTSCEEE-CCSSE-EEEECTT
T ss_pred ---CCCCCCeEEECCCCCEEE-ecCCc-EEEECCC
Confidence 123345688899998544 44554 8888764
No 220
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.59 E-value=5.1e-08 Score=80.51 Aligned_cols=180 Identities=14% Similarity=0.088 Sum_probs=90.7
Q ss_pred CCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEEeEeecCCcc
Q 023500 14 SGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQ 93 (281)
Q Consensus 14 ~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~~~~~~ 93 (281)
++..+++++.|+.|..||..+++... .+.. +.+.+..+.+++..+++++.|+.|..||..+++.. ..+..+..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W--~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~---w~~~~~~~ 80 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKW--TLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGL---TKLPFTIP 80 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEE--EEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCS---EECSCCHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEE--EecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCcee---eeeeccCc
Confidence 57788899999999999988886533 3333 45555556677888888899999999998766532 22222211
Q ss_pred -ceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeCCCcEEEEeC
Q 023500 94 -DVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGA 172 (281)
Q Consensus 94 -~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~ 172 (281)
.+.+......+..+++++.|+.++.||.++... .| .+. .+. ...++|++..+++++.|+.+..||.
T Consensus 81 ~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~-~w----~~~----~~~----~~~~~p~~~~v~~~~~dg~v~a~d~ 147 (369)
T 2hz6_A 81 ELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEK-QQ----TLS----SAF----ADSLSPSTSLLYLGRTEYTITMYDT 147 (369)
T ss_dssp HHHTTCSCC-----CCCCEEEEEEEEECCC-----------------------------------EEEEEEEEEEECCCS
T ss_pred cccccCceEecCCEEEEEeCCCEEEEEECCCCcE-EE----Eec----CCC----cccccccCCEEEEEecCCEEEEEEC
Confidence 111100011345678888999999998775431 11 111 111 1344567788999999999999987
Q ss_pred CccccccCCCCcccceeEEeecccCcceEEEEeCC----CceeeecCCCCcEEEEeccc
Q 023500 173 DITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR----EGIIASGAADDSVQFFVESK 227 (281)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~~~~d~~~~~~~~~~ 227 (281)
+.++.. |+.. .... .. ..... ++.++.++.++.+..|+...
T Consensus 148 ~tG~~~-------W~~~--~~~~-~~----~~~~~~~~~~~~v~~~~~dg~v~a~d~~t 192 (369)
T 2hz6_A 148 KTRELR-------WNAT--YFDY-AA----SLPEDDVDYKMSHFVSNGDGLVVTVDSES 192 (369)
T ss_dssp SSSSCC-------CEEE--EEEE-CC----BCCCCCTTCCCCEEEEETSCEEEEECTTT
T ss_pred CCCCEE-------EeEe--cccc-cC----ccccCCccccceEEEECCCCEEEEEECCC
Confidence 654321 2211 1100 11 11122 25566677788888886543
No 221
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.58 E-value=6.8e-05 Score=62.54 Aligned_cols=237 Identities=11% Similarity=0.086 Sum_probs=130.5
Q ss_pred CCCCEE-EEeeCCCcEEEEecCCC--ceeeeeeec--------CCCCCeeEEEEcCCCCEEEEecCC------CcEEEEE
Q 023500 13 PSGKLL-ATASFDATTCIWEDVGG--DYECVATLE--------GHENEVKSVSWNASGTLLATCGRD------KSVWIWE 75 (281)
Q Consensus 13 ~~~~~l-~tg~~d~~i~lw~~~~~--~~~~~~~~~--------~h~~~v~~v~~~~~~~~l~s~~~d------~~v~~w~ 75 (281)
+++++| ++|..++.|.++|..+. +.+..++++ +.. .=..+...|+| .++++..+ +.+.+.|
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s-~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYS-RLHTVHCGPDA-IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEE-EEEEEEECSSC-EEEEEEEETTSCSCCEEEEEC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCC-cccceeECCCe-EEEEcCCCcCCCCCCeEEEEE
Confidence 778765 56778889999997543 234445542 111 22356678999 77776555 7899998
Q ss_pred ecCCCeeEEeEeecC--C-ccceeEEEecCCCCeEEEEe-------------------cCCeEEEEeCCCCCCCCceeee
Q 023500 76 VMPGNEFECVSVLQG--H-AQDVKMVQWHPTMDVLFSCS-------------------YDNTIKVWWAEDTDSDNWHCVQ 133 (281)
Q Consensus 76 ~~~~~~~~~~~~~~~--~-~~~v~~v~~~p~~~~l~s~s-------------------~d~~v~~w~~~~~~~~~~~~~~ 133 (281)
....+. +..+.. . ...-..+-|+|+++.+++.. .+.+|.+|++... +.+.
T Consensus 171 ~~T~~v---~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~-----k~~~ 242 (462)
T 2ece_A 171 HYSFEP---LGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR-----KRIH 242 (462)
T ss_dssp TTTCCE---EEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT-----EEEE
T ss_pred CCCCeE---EEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC-----cEee
Confidence 765543 333431 1 12234578899999888875 3689999988753 2333
Q ss_pred eeeeccCCccccEEEEEE--ccCCCEEEEee------CCCcEEEEeCCccccccCCC--CcccceeEEee----cc--cC
Q 023500 134 TISESNNGHSSTIWALSF--NAKGDKLVSCS------DDLTIKIWGADITRMQSGDG--YASWRHLCTIS----GY--HD 197 (281)
Q Consensus 134 ~~~~~~~~h~~~v~~~~~--~~~~~~l~s~~------~d~~i~~w~~~~~~~~~~~~--~~~~~~~~~~~----~~--~~ 197 (281)
++.... .......+.| +|++++++.+. .+++|.+|..+.+.....+- .........+. .+ ..
T Consensus 243 tI~vg~--~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~ 320 (462)
T 2ece_A 243 SLTLGE--ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVP 320 (462)
T ss_dssp EEESCT--TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEEC
T ss_pred EEecCC--CCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCC
Confidence 443211 1123445666 99998776665 56677766443111100000 00000000000 00 01
Q ss_pred cceEEEEeCCCc--eeeecCCCCcEEEEecccCCCcCCccceeeeeeccC-------C------CCCeeEEEEcCCCCee
Q 023500 198 RTIFSVHWSREG--IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKA-------H------DMDVNSVQWSPGERRL 262 (281)
Q Consensus 198 ~~v~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------h------~~~v~~~~~~~~~~~~ 262 (281)
.....+.+++++ ++++.-..+.+.+|++.... . . +.......+ | ......++++|+|+++
T Consensus 321 ~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~--~-~--~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~L 395 (462)
T 2ece_A 321 PLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPF--K-P--VLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRV 395 (462)
T ss_dssp CCCCCEEECTTSCEEEEEETTTTEEEEEECSSTT--S-C--EEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEE
T ss_pred CceeEEEECCCCCEEEEEeCCCCEEEEEEecCCC--C-c--EEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEE
Confidence 234566777776 45666667899999875211 1 1 111111111 1 1135789999999988
Q ss_pred EEEe
Q 023500 263 LASA 266 (281)
Q Consensus 263 ~~s~ 266 (281)
+++.
T Consensus 396 yVaN 399 (462)
T 2ece_A 396 YVTN 399 (462)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 7776
No 222
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.55 E-value=4.1e-05 Score=62.99 Aligned_cols=148 Identities=11% Similarity=0.086 Sum_probs=93.8
Q ss_pred EEcCCCCEEEEeeC-----CCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEec----------CCCcEEEE
Q 023500 10 AWSPSGKLLATASF-----DATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCG----------RDKSVWIW 74 (281)
Q Consensus 10 ~~~~~~~~l~tg~~-----d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~----------~d~~v~~w 74 (281)
...|+++.+..... ++.+.+.|..+.+. +..+..-..+ . ++++|||++++.++ .++.|.+|
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v--~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRV--IGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEE--EEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeE--EEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEE
Confidence 45688887666554 67899999877653 4444433334 3 99999999887665 36789999
Q ss_pred EecCCCeeEEeEeecC-C---ccceeEEEecCCCCeEEEEec--CCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEE
Q 023500 75 EVMPGNEFECVSVLQG-H---AQDVKMVQWHPTMDVLFSCSY--DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWA 148 (281)
Q Consensus 75 ~~~~~~~~~~~~~~~~-~---~~~v~~v~~~p~~~~l~s~s~--d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 148 (281)
|....+....+..-.+ + ...-..+.++|++++++.+.. +++|.++|..+.. .+.++... . + .
T Consensus 115 D~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~-----vv~tI~v~-----g-~-~ 182 (386)
T 3sjl_D 115 DPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKA-----FKRMLDVP-----D-C-Y 182 (386)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTE-----EEEEEECC-----S-E-E
T ss_pred ECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCc-----EEEEEECC-----C-c-c
Confidence 9876654322222110 0 123567899999998887764 6899999887642 33333211 1 1 1
Q ss_pred EEEccCCCEEEEeeCCCcEEEEeCC
Q 023500 149 LSFNAKGDKLVSCSDDLTIKIWGAD 173 (281)
Q Consensus 149 ~~~~~~~~~l~s~~~d~~i~~w~~~ 173 (281)
..+......+++.+.||.+.+.+.+
T Consensus 183 ~~~P~g~~~~~~~~~DG~~~~v~~~ 207 (386)
T 3sjl_D 183 HIFPTAPDTFFMHCRDGSLAKVAFG 207 (386)
T ss_dssp EEEEEETTEEEEEETTSCEEEEECC
T ss_pred eeecCCCceeEEECCCCCEEEEECC
Confidence 2222233566677778888777765
No 223
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.48 E-value=0.00033 Score=57.69 Aligned_cols=144 Identities=8% Similarity=0.022 Sum_probs=89.2
Q ss_pred EcCCCCEEEEeeC--CC---cEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEec----------CCCcEEEEE
Q 023500 11 WSPSGKLLATASF--DA---TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCG----------RDKSVWIWE 75 (281)
Q Consensus 11 ~~~~~~~l~tg~~--d~---~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~----------~d~~v~~w~ 75 (281)
..|+++++..... .. .|.++|..+++. +..+..-..+ .++++|||++++.+. .++.|.++|
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~--~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD 103 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSI--LGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFD 103 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeE--EEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEE
Confidence 3467776655543 22 789999877653 4454432333 899999999988775 367899999
Q ss_pred ecCCCeeEEeEee-cCC---ccceeEEEecCCCCeEEEEec--CCeEEEEeCCCCCCCCceeeee-eeeccCCccccEEE
Q 023500 76 VMPGNEFECVSVL-QGH---AQDVKMVQWHPTMDVLFSCSY--DNTIKVWWAEDTDSDNWHCVQT-ISESNNGHSSTIWA 148 (281)
Q Consensus 76 ~~~~~~~~~~~~~-~~~---~~~v~~v~~~p~~~~l~s~s~--d~~v~~w~~~~~~~~~~~~~~~-~~~~~~~h~~~v~~ 148 (281)
....+....+... ..+ ...-..+.|+|++++++.++. +++|.++| .... .+.. +.. .. +
T Consensus 104 ~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~-----~~~~~i~~-----~~---~ 169 (373)
T 2mad_H 104 PVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGS-----SDDQLLSS-----PT---C 169 (373)
T ss_pred CCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCC-----EEeEEcCC-----Cc---e
Confidence 8654432222111 000 122457899999999988874 47899998 5432 2222 211 11 2
Q ss_pred EEEccCC-CEEEEeeCCCcEEEEeC
Q 023500 149 LSFNAKG-DKLVSCSDDLTIKIWGA 172 (281)
Q Consensus 149 ~~~~~~~-~~l~s~~~d~~i~~w~~ 172 (281)
+.+.|++ ..+++.+.||.+.+++.
T Consensus 170 ~~~~~~~~~~~~~~~~dg~~~~vd~ 194 (373)
T 2mad_H 170 YHIHPGAPSTFYLLCAQGGLAKTDH 194 (373)
T ss_pred EEEEeCCCceEEEEcCCCCEEEEEC
Confidence 3444554 45666778999988887
No 224
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.45 E-value=8.8e-06 Score=66.81 Aligned_cols=103 Identities=11% Similarity=-0.030 Sum_probs=68.0
Q ss_pred CEEEEeeCCC----cEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEec----------CCCcEEEEEecCCCe
Q 023500 16 KLLATASFDA----TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCG----------RDKSVWIWEVMPGNE 81 (281)
Q Consensus 16 ~~l~tg~~d~----~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~----------~d~~v~~w~~~~~~~ 81 (281)
+.+++-..++ .+.+.|..+.+. +.++..-..+ .+.++||+++++.+. .+++|.+||+...+.
T Consensus 33 ~~yV~~~~~~~~~d~vsvID~~t~~v--~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v 108 (368)
T 1mda_H 33 RSHITLPAYFAGTTENWVSCAGCGVT--LGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP 108 (368)
T ss_dssp EEEEEECTTTCSSEEEEEEETTTTEE--EEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE
T ss_pred eEEEECCccCCccceEEEEECCCCeE--EEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE
Confidence 3555655555 777999877653 4454432345 699999999887775 368999999987664
Q ss_pred eEEeEee-cCC---ccceeEEEecCCCCeEEEEec--CCeEEE--EeCC
Q 023500 82 FECVSVL-QGH---AQDVKMVQWHPTMDVLFSCSY--DNTIKV--WWAE 122 (281)
Q Consensus 82 ~~~~~~~-~~~---~~~v~~v~~~p~~~~l~s~s~--d~~v~~--w~~~ 122 (281)
...+..- ..+ ...-..+.++|++++++.+.. +..+.+ +|..
T Consensus 109 v~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~ 157 (368)
T 1mda_H 109 IADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGAS 157 (368)
T ss_dssp EEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTE
T ss_pred EEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchh
Confidence 3222211 000 123568899999999888875 357877 7654
No 225
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.34 E-value=0.00066 Score=54.53 Aligned_cols=241 Identities=11% Similarity=0.010 Sum_probs=127.4
Q ss_pred eeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecC-----------------CCCCeeEEEEcC-CCCEEEEecC
Q 023500 6 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEG-----------------HENEVKSVSWNA-SGTLLATCGR 67 (281)
Q Consensus 6 i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~-----------------h~~~v~~v~~~~-~~~~l~s~~~ 67 (281)
...++++++|+++.++..++.|..|+..++.......... .......+++.+ +|+++++..
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~- 99 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDC- 99 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEET-
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEEC-
Confidence 3467899999977788888999999876654432211000 113467899998 665555433
Q ss_pred CCcEEEEEecCCCeeEEeE-eecCC-ccceeEEEecC-CCCeEEEEec-----------------CCeEEEEeCCCCCCC
Q 023500 68 DKSVWIWEVMPGNEFECVS-VLQGH-AQDVKMVQWHP-TMDVLFSCSY-----------------DNTIKVWWAEDTDSD 127 (281)
Q Consensus 68 d~~v~~w~~~~~~~~~~~~-~~~~~-~~~v~~v~~~p-~~~~l~s~s~-----------------d~~v~~w~~~~~~~~ 127 (281)
.+.+..+|...+ ...... ...+. ....+.+++.| ++.++++... ++.|..++.....
T Consensus 100 ~~~i~~~d~~~g-~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~-- 176 (322)
T 2fp8_A 100 YYHLSVVGSEGG-HATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE-- 176 (322)
T ss_dssp TTEEEEECTTCE-ECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE--
T ss_pred CCCEEEEeCCCC-EEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE--
Confidence 344777764322 111111 11111 12357788999 8887776433 2566666553321
Q ss_pred CceeeeeeeeccCCccccEEEEEEccCCCEEEEe-eCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeC
Q 023500 128 NWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWS 206 (281)
Q Consensus 128 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 206 (281)
+..+... ......++|+|+++.|+.+ ...+.|..|+.+.... ...+.... ... ...+..+
T Consensus 177 ----~~~~~~~----~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~------~~~~~~~~----~~g-P~gi~~d 237 (322)
T 2fp8_A 177 ----TTLLLKE----LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKK------GTAEVLVK----IPN-PGNIKRN 237 (322)
T ss_dssp ----EEEEEEE----ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTT------TCEEEEEE----CSS-EEEEEEC
T ss_pred ----EEEeccC----CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcC------CccceEEe----CCC-CCCeEEC
Confidence 1111110 1234578999999855544 5567898888753210 00111111 112 4566777
Q ss_pred CCceeeecC-C----------CCcEEEEecccCCCcCCccceeeeeeccCC-CCCeeEEEEcCCCCeeEEEeCCCCeEEE
Q 023500 207 REGIIASGA-A----------DDSVQFFVESKDDLIDGPSYKMLLKKEKAH-DMDVNSVQWSPGERRLLASASDDGMIKI 274 (281)
Q Consensus 207 ~~~~~~~~~-~----------d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~~s~~~Dg~v~i 274 (281)
++|.+..+. . .+.+..++... .... .+....+. -..++.+.+. +..++++....+.|..
T Consensus 238 ~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G------~~~~-~~~~~~g~~~~~~~~~~~~--~g~L~v~~~~~~~i~~ 308 (322)
T 2fp8_A 238 ADGHFWVSSSEELDGNMHGRVDPKGIKFDEFG------NILE-VIPLPPPFAGEHFEQIQEH--DGLLYIGTLFHGSVGI 308 (322)
T ss_dssp TTSCEEEEEEEETTSSTTSCEEEEEEEECTTS------CEEE-EEECCTTTTTSCCCEEEEE--TTEEEEECSSCSEEEE
T ss_pred CCCCEEEEecCcccccccCCCccEEEEECCCC------CEEE-EEECCCCCccccceEEEEe--CCEEEEeecCCCceEE
Confidence 776433332 2 23444553321 1111 11111111 2346667764 3467888878888998
Q ss_pred EEcc
Q 023500 275 WELA 278 (281)
Q Consensus 275 w~~~ 278 (281)
+++.
T Consensus 309 ~~~~ 312 (322)
T 2fp8_A 309 LVYD 312 (322)
T ss_dssp EEC-
T ss_pred Eecc
Confidence 8875
No 226
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.32 E-value=0.00056 Score=53.25 Aligned_cols=209 Identities=9% Similarity=0.063 Sum_probs=118.2
Q ss_pred eeeeecCCCCC--eeEEEEcCCCCEEEEecC--CCcEEEEEecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEecCC
Q 023500 39 CVATLEGHENE--VKSVSWNASGTLLATCGR--DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN 114 (281)
Q Consensus 39 ~~~~~~~h~~~--v~~v~~~~~~~~l~s~~~--d~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~ 114 (281)
.+.++ .|... ...+.|+|++.+.++.+. +..|.+.|+..++....+. +..+ .....+.+.. +.++++...++
T Consensus 11 vv~~~-p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~-l~~~-~fgeGi~~~g-~~lyv~t~~~~ 86 (266)
T 2iwa_A 11 VLNEF-PHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHK-MDDS-YFGEGLTLLN-EKLYQVVWLKN 86 (266)
T ss_dssp EEEEE-ECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEE-CCTT-CCEEEEEEET-TEEEEEETTCS
T ss_pred EEEEE-ECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEe-cCCC-cceEEEEEeC-CEEEEEEecCC
Confidence 34454 35543 478999998766666554 6799999998776432221 2221 2223444443 23455555678
Q ss_pred eEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeec
Q 023500 115 TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISG 194 (281)
Q Consensus 115 ~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~ 194 (281)
.+.++|..+. +.+.++... .+ . ...++++++.|+.+..++++.++|.+..+.. ..+..
T Consensus 87 ~v~viD~~t~-----~v~~~i~~g-~~--~---g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~-----------~~I~V 144 (266)
T 2iwa_A 87 IGFIYDRRTL-----SNIKNFTHQ-MK--D---GWGLATDGKILYGSDGTSILYEIDPHTFKLI-----------KKHNV 144 (266)
T ss_dssp EEEEEETTTT-----EEEEEEECC-SS--S---CCEEEECSSSEEEECSSSEEEEECTTTCCEE-----------EEEEC
T ss_pred EEEEEECCCC-----cEEEEEECC-CC--C---eEEEEECCCEEEEECCCCeEEEEECCCCcEE-----------EEEEE
Confidence 9999987643 233444321 11 1 1234567776666667889999988643321 11111
Q ss_pred c-cCc---ceEEEEeCCCceeeecCCCCcEEEEecccCCCcCCccceeeeee-c------cCC--CCCeeEEEEcCCCCe
Q 023500 195 Y-HDR---TIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKK-E------KAH--DMDVNSVQWSPGERR 261 (281)
Q Consensus 195 ~-~~~---~v~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~h--~~~v~~~~~~~~~~~ 261 (281)
. ... .+..+.+.....+++....+.+.+.+.....+. ..+-.. . ..+ ....+.++|+|++++
T Consensus 145 g~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~V~-----~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~ 219 (266)
T 2iwa_A 145 KYNGHRVIRLNELEYINGEVWANIWQTDCIARISAKDGTLL-----GWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKR 219 (266)
T ss_dssp EETTEECCCEEEEEEETTEEEEEETTSSEEEEEETTTCCEE-----EEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTE
T ss_pred CCCCcccccceeEEEECCEEEEecCCCCeEEEEECCCCcEE-----EEEECCCcccccccccccccCceEEEEEcCCCCE
Confidence 1 111 234555663334555555677777766543221 111100 0 011 134689999999989
Q ss_pred eEEEeCCCCeEEEEEcc
Q 023500 262 LLASASDDGMIKIWELA 278 (281)
Q Consensus 262 ~~~s~~~Dg~v~iw~~~ 278 (281)
+++++...+.|...++.
T Consensus 220 lfVTgk~~~~v~~i~l~ 236 (266)
T 2iwa_A 220 IFVTGKLWPKLFEIKLH 236 (266)
T ss_dssp EEEEETTCSEEEEEEEE
T ss_pred EEEECCCCCeEEEEEEe
Confidence 99999999998887764
No 227
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.31 E-value=6.2e-05 Score=67.94 Aligned_cols=203 Identities=11% Similarity=0.115 Sum_probs=104.8
Q ss_pred ceeEEEEc-CCCCEEEEeeC-CC----cEEEEecCCC-ceeeeeeecCCCCCeeEEEEcCCCCEEEEecCC-----CcEE
Q 023500 5 TVRSCAWS-PSGKLLATASF-DA----TTCIWEDVGG-DYECVATLEGHENEVKSVSWNASGTLLATCGRD-----KSVW 72 (281)
Q Consensus 5 ~i~~~~~~-~~~~~l~tg~~-d~----~i~lw~~~~~-~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d-----~~v~ 72 (281)
.+...+|| |||++||-+.. +| .|.++|..++ +.. ...+. .....+.|+|||+.|+-...| ..|.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l-~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~ 250 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTI-ADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVW 250 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCC-CCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeC-Ccccc---CceeeEEEecCCCEEEEEEECCCCCCCEEE
Confidence 46678999 99998874432 22 4888988776 421 11111 123468899999887766654 2466
Q ss_pred EEEecCCCeeEEeEeec-CCccceeEEEecCCCCeEEEEecC---CeEEEEeCCCCCCCCceeeeeeeeccCCccccEEE
Q 023500 73 IWEVMPGNEFECVSVLQ-GHAQDVKMVQWHPTMDVLFSCSYD---NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWA 148 (281)
Q Consensus 73 ~w~~~~~~~~~~~~~~~-~~~~~v~~v~~~p~~~~l~s~s~d---~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 148 (281)
++++..+.... ..++. ........+.|+|++++|+..+.+ ..|.++++..... .. .+..+. .......+.
T Consensus 251 ~~~lgt~~~~~-~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~-~~-~~~~l~---~~~~~~~~s 324 (751)
T 2xe4_A 251 RHVMGKLQSED-VCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNA-HN-TLEIVR---PREKGVRYD 324 (751)
T ss_dssp EEETTSCGGGC-EEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTT-CC-CEEESS---CCCTTCCEE
T ss_pred EEECCCCchhc-EEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCC-Cc-eeEEee---cCCCCceEE
Confidence 66664432111 11222 222345678999999987655533 3566776654311 11 001111 122334455
Q ss_pred EEEccCCCEEEEeeCC--CcEEEEeCCccccccCCCCcccce-eEEeecccCcceEEEEeCCCceeeecCCCCcEEEEec
Q 023500 149 LSFNAKGDKLVSCSDD--LTIKIWGADITRMQSGDGYASWRH-LCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVE 225 (281)
Q Consensus 149 ~~~~~~~~~l~s~~~d--~~i~~w~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~~~~~~~ 225 (281)
+.|+..+.+++....+ +..++|..+.... ..++. +. ....+..+..+.+..+.++++...++..+++..
T Consensus 325 ~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~------~~~~~~li--~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~ 396 (751)
T 2xe4_A 325 VQMHGTSHLVILTNEGGAVNHKLLIAPRGQP------SDWSHVLV--DHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTM 396 (751)
T ss_dssp EEEETTTEEEEEECTTTCTTCEEEEEETTST------TCCCCEEE--CCCSSEEEEEEEECSSEEEEEEEETTEEEEEEE
T ss_pred EeeeeCCEEEEEeCCCCCCCcEEEEEcCCCc------ccceeeEE--CCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEE
Confidence 6655444444444443 4455553332110 01121 11 111122445566666666777777776666644
No 228
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.30 E-value=0.00011 Score=61.53 Aligned_cols=143 Identities=9% Similarity=0.048 Sum_probs=85.6
Q ss_pred CCCCEEE-EeeCC----CcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEec----------CCCcEEEEEec
Q 023500 13 PSGKLLA-TASFD----ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCG----------RDKSVWIWEVM 77 (281)
Q Consensus 13 ~~~~~l~-tg~~d----~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~----------~d~~v~~w~~~ 77 (281)
|+++.+. +...+ +.|.++|..+.+. +..+.--..+ .+.++|||++++.+. .++.|.++|..
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~v--v~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~ 157 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRI--LGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV 157 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEE--EEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEE--EEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECC
Confidence 3566444 43333 6899999887754 4444422344 799999999887765 46789999987
Q ss_pred CCCeeEEeEee-cC---CccceeEEEecCCCCeEEEEec--CCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEE
Q 023500 78 PGNEFECVSVL-QG---HAQDVKMVQWHPTMDVLFSCSY--DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSF 151 (281)
Q Consensus 78 ~~~~~~~~~~~-~~---~~~~v~~v~~~p~~~~l~s~s~--d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 151 (281)
..+....+..- .. ....-..+.++|++++++.+.. +++|.+.|..... .+.++... . +...
T Consensus 158 t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~k-----vv~~I~v~-----g---~~~~ 224 (426)
T 3c75_H 158 TFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKT-----FDRMLDVP-----D---CYHI 224 (426)
T ss_dssp TCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTE-----EEEEEECC-----S---EEEE
T ss_pred CCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCe-----EEEEEEcC-----C---ceee
Confidence 66543222211 00 0123467889999999888774 5789999876542 23333211 1 1122
Q ss_pred ccCC-CEEEEeeCCCcEEEEeC
Q 023500 152 NAKG-DKLVSCSDDLTIKIWGA 172 (281)
Q Consensus 152 ~~~~-~~l~s~~~d~~i~~w~~ 172 (281)
.|++ ..+++.+.||.+.+.+.
T Consensus 225 ~p~g~~~~v~~~~dG~~~~V~~ 246 (426)
T 3c75_H 225 FPASPTVFYMNCRDGSLARVDF 246 (426)
T ss_dssp EEEETTEEEEEETTSSEEEEEC
T ss_pred ccCCCcEEEEEcCCCCEEEEEC
Confidence 3332 44555666776666655
No 229
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.27 E-value=0.00067 Score=51.89 Aligned_cols=210 Identities=11% Similarity=0.114 Sum_probs=109.3
Q ss_pred eeeeeecCCCCC--eeEEEEcCCCCEEEEecCCC--cEEEEEecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEecC
Q 023500 38 ECVATLEGHENE--VKSVSWNASGTLLATCGRDK--SVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYD 113 (281)
Q Consensus 38 ~~~~~~~~h~~~--v~~v~~~~~~~~l~s~~~d~--~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d 113 (281)
+.+.++ .|+.. ...+.|++ +.+..+.|.++ .|+..|+.+++....+ .+..+ .--..+.... +.++.....+
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~-~l~~~-~fgeGi~~~~-~~ly~ltw~~ 84 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRA-EVPPP-YFGAGIVAWR-DRLIQLTWRN 84 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEE-ECCTT-CCEEEEEEET-TEEEEEESSS
T ss_pred EEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEE-eCCCC-cceeEEEEeC-CEEEEEEeeC
Confidence 345555 57654 44888986 66677777765 8999999877643322 12221 1112223322 3345556678
Q ss_pred CeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEee
Q 023500 114 NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTIS 193 (281)
Q Consensus 114 ~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~ 193 (281)
+.+.++|..+. +.+.++.... .-+.++ +++..|+....++.|.++|.+..+.. ..+.
T Consensus 85 ~~v~v~D~~tl-----~~~~ti~~~~-----~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~-----------~~I~ 141 (243)
T 3mbr_X 85 HEGFVYDLATL-----TPRARFRYPG-----EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQV-----------GSIK 141 (243)
T ss_dssp SEEEEEETTTT-----EEEEEEECSS-----CCCEEE--ECSSCEEEECSSSEEEEECTTTCCEE-----------EEEE
T ss_pred CEEEEEECCcC-----cEEEEEeCCC-----CceEEe--eCCCEEEEECCCCeEEEEeCCCCeEE-----------EEEE
Confidence 89999987653 2344443221 123444 45666666666889999987653321 1111
Q ss_pred c-ccC---cceEEEEeCCCceeeecCCCCcEEEEecccCCCcCCccceeeeeec----cCCCCCeeEEEEcCCCCeeEEE
Q 023500 194 G-YHD---RTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKE----KAHDMDVNSVQWSPGERRLLAS 265 (281)
Q Consensus 194 ~-~~~---~~v~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~----~~h~~~v~~~~~~~~~~~~~~s 265 (281)
. .+. ..+..+.+.....++.......+.+.+...+.+........+.... ..-..-.+.|+++|++.++++|
T Consensus 142 V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVT 221 (243)
T 3mbr_X 142 VTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVT 221 (243)
T ss_dssp CEETTEECCCEEEEEEETTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEE
T ss_pred EccCCcccccceeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEE
Confidence 1 011 1223445544444555545566666655433221100000000000 0112346899999988888888
Q ss_pred eCCCCeEEEEEc
Q 023500 266 ASDDGMIKIWEL 277 (281)
Q Consensus 266 ~~~Dg~v~iw~~ 277 (281)
|-. .=++|.+
T Consensus 222 GK~--wp~~~~v 231 (243)
T 3mbr_X 222 GKR--WPMLYEI 231 (243)
T ss_dssp ETT--CSEEEEE
T ss_pred CCC--CCcEEEE
Confidence 743 3344443
No 230
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.27 E-value=0.00036 Score=53.93 Aligned_cols=208 Identities=13% Similarity=0.171 Sum_probs=108.8
Q ss_pred eeeeecCCCCCe--eEEEEcCCCCEEEEecCCC--cEEEEEecCCCeeEEeEeecCCccceeEEEecCCCCe-EEEEecC
Q 023500 39 CVATLEGHENEV--KSVSWNASGTLLATCGRDK--SVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDV-LFSCSYD 113 (281)
Q Consensus 39 ~~~~~~~h~~~v--~~v~~~~~~~~l~s~~~d~--~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~-l~s~s~d 113 (281)
.+.++ .|+..- ..+.|+ ++.+..+.|.++ .|++.|+.+++....+. +. .........+.++. +.+...+
T Consensus 33 vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~-l~---~~~FgeGit~~g~~ly~ltw~~ 106 (262)
T 3nol_A 33 IVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIE-LG---KRYFGEGISDWKDKIVGLTWKN 106 (262)
T ss_dssp EEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEE-CC---TTCCEEEEEEETTEEEEEESSS
T ss_pred EEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEe-cC---CccceeEEEEeCCEEEEEEeeC
Confidence 34455 466544 688888 677778888877 89999998776433221 21 12222222233444 4445567
Q ss_pred CeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEee
Q 023500 114 NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTIS 193 (281)
Q Consensus 114 ~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~ 193 (281)
+.+.++|.++.. .+.++.... .-+.++ ++++.|+....+++|.++|.+..+.. ..+.
T Consensus 107 ~~v~v~D~~t~~-----~~~ti~~~~-----eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~-----------~~I~ 163 (262)
T 3nol_A 107 GLGFVWNIRNLR-----QVRSFNYDG-----EGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPV-----------RTIT 163 (262)
T ss_dssp SEEEEEETTTCC-----EEEEEECSS-----CCCCEE--ECSSCEEECCSSSEEEEECTTTCSEE-----------EEEE
T ss_pred CEEEEEECccCc-----EEEEEECCC-----CceEEe--cCCCEEEEECCCCeEEEEcCCCCeEE-----------EEEE
Confidence 899999876542 334443211 112333 56676766666788999987643321 1111
Q ss_pred c-ccCcc---eEEEEeCCCceeeecCCCCcEEEEecccCCCcCCccceeeeee---ccCCCCCeeEEEEcCCCCeeEEEe
Q 023500 194 G-YHDRT---IFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKK---EKAHDMDVNSVQWSPGERRLLASA 266 (281)
Q Consensus 194 ~-~~~~~---v~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~h~~~v~~~~~~~~~~~~~~s~ 266 (281)
. ....+ +..+.+....+++.....+.+.+.+...+.+........+... ...-..-.+.|+|+|+++.++++|
T Consensus 164 V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 164 VTAHGEELPELNELEWVDGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp CEETTEECCCEEEEEEETTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred eccCCccccccceeEEECCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 1 11122 2235555333455554566777775543322110000000000 001123468999999988888887
Q ss_pred CCCCeEEEEEc
Q 023500 267 SDDGMIKIWEL 277 (281)
Q Consensus 267 ~~Dg~v~iw~~ 277 (281)
- ..=++|.+
T Consensus 244 K--~Wp~~~ev 252 (262)
T 3nol_A 244 K--LWPKVFEI 252 (262)
T ss_dssp T--TCSEEEEE
T ss_pred C--CCCceEEE
Confidence 4 34344443
No 231
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.21 E-value=0.0017 Score=54.22 Aligned_cols=202 Identities=12% Similarity=0.144 Sum_probs=112.8
Q ss_pred EEc--CCCCEE-EEecCCCcEEEEEecCC-CeeEEeEeec-------CCccceeEEEecCCCCeEEEEecC------CeE
Q 023500 54 SWN--ASGTLL-ATCGRDKSVWIWEVMPG-NEFECVSVLQ-------GHAQDVKMVQWHPTMDVLFSCSYD------NTI 116 (281)
Q Consensus 54 ~~~--~~~~~l-~s~~~d~~v~~w~~~~~-~~~~~~~~~~-------~~~~~v~~v~~~p~~~~l~s~s~d------~~v 116 (281)
.++ ++.++| +++..+.+|.+.|+... ...+...++. .....-..+...|++ +++++..+ +.+
T Consensus 88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI 166 (462)
T ss_dssp TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred ccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Confidence 346 677765 56777899999998633 2233344442 011123445667999 77776666 688
Q ss_pred EEEeCCCCCCCCceeeeeeeeccCCcc-ccEEEEEEccCCCEEEEee-------------------CCCcEEEEeCCccc
Q 023500 117 KVWWAEDTDSDNWHCVQTISESNNGHS-STIWALSFNAKGDKLVSCS-------------------DDLTIKIWGADITR 176 (281)
Q Consensus 117 ~~w~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~~-------------------~d~~i~~w~~~~~~ 176 (281)
.+.|.++.+ .+.+.... ... .--..+.|+|+++.+++.. .+..|.+||....+
T Consensus 167 ~vlD~~T~~-----v~~~~~~~--~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k 239 (462)
T 2ece_A 167 LMLDHYSFE-----PLGKWEID--RGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK 239 (462)
T ss_dssp EEECTTTCC-----EEEECCSB--CTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE
T ss_pred EEEECCCCe-----EEEEEccC--CCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc
Confidence 888765432 23333211 111 1123577899999888874 36789999986432
Q ss_pred cccCCCCcccceeEEeecc-cCcceEEEE--eCCCc--eeeecC-----CCCcEEEEecccCCCcCCccceeee--eec-
Q 023500 177 MQSGDGYASWRHLCTISGY-HDRTIFSVH--WSREG--IIASGA-----ADDSVQFFVESKDDLIDGPSYKMLL--KKE- 243 (281)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~-~~~~v~~~~--~~~~~--~~~~~~-----~d~~~~~~~~~~~~~~~~~~~~~~~--~~~- 243 (281)
. ..++... .......+. ++|++ .++++. .++++.+|....+. .. ....+ ...
T Consensus 240 ~-----------~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~-~~---~~~vIdi~~~~ 304 (462)
T 2ece_A 240 R-----------IHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK-WN---AEKVIEIPAEP 304 (462)
T ss_dssp E-----------EEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE-EE---EEEEEEECCEE
T ss_pred E-----------eeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc-ee---EEEEEeCCCcc
Confidence 1 1111111 112233343 47765 233333 44566554332210 00 00000 000
Q ss_pred -c-----------CCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEcc
Q 023500 244 -K-----------AHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 278 (281)
Q Consensus 244 -~-----------~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~ 278 (281)
. +-......+.++|++++++++.-..+.|.+||+.
T Consensus 305 v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 305 LEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp CCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred ccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 0 0013467899999999999998889999999985
No 232
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.21 E-value=0.00062 Score=54.52 Aligned_cols=217 Identities=11% Similarity=-0.000 Sum_probs=119.3
Q ss_pred CCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEEeEeecCCccc
Q 023500 15 GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQD 94 (281)
Q Consensus 15 ~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~~~~~~~ 94 (281)
+..+..++.++.+..+|.. +.. ......+...+.++...+++. +..++.++.+..+|.. +... .........
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~--~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~---~~~~~~~~~ 178 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTE--KWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEK---WRFKTNDAI 178 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCE--EEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEE---EEEECSSCC
T ss_pred CCEEEEEecCCEEEEEcCC-CCE--EEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEe---EEEecCCCc
Confidence 3445567778889999876 443 223333445566667776776 4456677889888876 4322 222223445
Q ss_pred eeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeCCCcEEEEeCCc
Q 023500 95 VKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADI 174 (281)
Q Consensus 95 v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~ 174 (281)
+.++...+++.+++++ +.+..++ .... ...... .....+.++...+++. |..++.++.+..++.+.
T Consensus 179 ~~~~~~d~~g~l~v~t---~~l~~~d-~~g~-----~~~~~~----~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~g 244 (330)
T 3hxj_A 179 TSAASIGKDGTIYFGS---DKVYAIN-PDGT-----EKWNFY----AGYWTVTRPAISEDGT-IYVTSLDGHLYAINPDG 244 (330)
T ss_dssp CSCCEECTTCCEEEES---SSEEEEC-TTSC-----EEEEEC----CSSCCCSCCEECTTSC-EEEEETTTEEEEECTTS
T ss_pred eeeeEEcCCCEEEEEe---CEEEEEC-CCCc-----EEEEEc----cCCcceeceEECCCCe-EEEEcCCCeEEEECCCC
Confidence 6667777777765554 7788886 2211 111111 1123466677777764 55566677787776432
Q ss_pred cccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEE
Q 023500 175 TRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQ 254 (281)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 254 (281)
... ..+.. ....+..+...+++.+..++.++.+..++... .. ... .......+.++.
T Consensus 245 ~~~------------~~~~~-~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~~g------~~---~~~-~~~~~~~~~~~~ 301 (330)
T 3hxj_A 245 TEK------------WRFKT-GKRIESSPVIGNTDTIYFGSYDGHLYAINPDG------TE---KWN-FETGSWIIATPV 301 (330)
T ss_dssp CEE------------EEEEC-SSCCCSCCEECTTSCEEEECTTCEEEEECTTS------CE---EEE-EECSSCCCSCCE
T ss_pred CEe------------EEeeC-CCCccccceEcCCCeEEEecCCCCEEEECCCC------cE---EEE-EEcCCccccceE
Confidence 111 01110 11112223345577777778787777775321 11 111 112234566777
Q ss_pred EcCCCCeeEEEeCCCCeEEEEEcc
Q 023500 255 WSPGERRLLASASDDGMIKIWELA 278 (281)
Q Consensus 255 ~~~~~~~~~~s~~~Dg~v~iw~~~ 278 (281)
..+++. ++ .++.+|.+++....
T Consensus 302 ~d~~g~-l~-~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 302 IDENGT-IY-FGTRNGKFYALFNL 323 (330)
T ss_dssp ECTTCC-EE-EECTTSCEEEEEC-
T ss_pred EcCCCE-EE-EEcCCCeEEEEecc
Confidence 767654 44 57889999887654
No 233
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.13 E-value=0.00057 Score=59.01 Aligned_cols=199 Identities=9% Similarity=-0.038 Sum_probs=113.3
Q ss_pred CCCEEEEeeCC-CcEEEEecCCCceeeeeeecCCCCCeeEEEE-c-CCCCEEEEec------------------CCCcEE
Q 023500 14 SGKLLATASFD-ATTCIWEDVGGDYECVATLEGHENEVKSVSW-N-ASGTLLATCG------------------RDKSVW 72 (281)
Q Consensus 14 ~~~~l~tg~~d-~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~-~-~~~~~l~s~~------------------~d~~v~ 72 (281)
||+++.....+ +.|.+-|..+.+...+..+. .......+++ + |++.+++.++ .++.+.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip-~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIP-NAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECS-SCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCC-CCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 77776655554 46888888776432222322 2345778888 5 9999988774 245677
Q ss_pred EEEecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEecCC--------------------------------------
Q 023500 73 IWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN-------------------------------------- 114 (281)
Q Consensus 73 ~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~-------------------------------------- 114 (281)
+.|....+....+. .+. .-..+..+|++.++++++.+.
T Consensus 179 vID~~t~~v~~qI~--Vgg--~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~ 254 (595)
T 1fwx_A 179 AVDADKWEVAWQVL--VSG--NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELN 254 (595)
T ss_dssp EEETTTTEEEEEEE--ESS--CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEET
T ss_pred EEECCCCeEEEEEE--eCC--CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEEC
Confidence 77775433221221 111 345677899999998888664
Q ss_pred eEEEEeCCCCCCCCcee-eeeeeeccCCccccEEEEEEccCCCEEEEe-eCCCcEEEEeCCccccccCCCCcccc-eeEE
Q 023500 115 TIKVWWAEDTDSDNWHC-VQTISESNNGHSSTIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWR-HLCT 191 (281)
Q Consensus 115 ~v~~w~~~~~~~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~d~~i~~w~~~~~~~~~~~~~~~~~-~~~~ 191 (281)
.|.+.|..... .+. +..+... ..+.++.++|||++++.. ..+.++.++|.+..+......+.... ....
T Consensus 255 ~V~VID~~~~~---~~~~~~~Ipvg-----~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~ 326 (595)
T 1fwx_A 255 GVKVVDGRKEA---SSLFTRYIPIA-----NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAE 326 (595)
T ss_dssp TEEEEECSGGG---CCSSEEEEEEE-----SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEEC
T ss_pred cEEEEeCcccC---CceeEEEEecC-----CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEE
Confidence 23333333210 001 1122211 234578999999976554 46789999998743210000000000 1111
Q ss_pred eecccCcceEEEEeCCCce-eeecCCCCcEEEEeccc
Q 023500 192 ISGYHDRTIFSVHWSREGI-IASGAADDSVQFFVESK 227 (281)
Q Consensus 192 ~~~~~~~~v~~~~~~~~~~-~~~~~~d~~~~~~~~~~ 227 (281)
. .-......+.|+++|. +++...+..+..|+...
T Consensus 327 v--~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 327 P--ELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp C--BCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred c--CCCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 1 1234567788998885 34666788999998754
No 234
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.11 E-value=0.00066 Score=60.51 Aligned_cols=156 Identities=6% Similarity=0.062 Sum_probs=86.5
Q ss_pred CCCEEEEeeCCCcEEEEecCCCceeeeeeec-CCC--CCeeEEEEcCCCCEEEEec------CCCcEEEEEecCCCeeEE
Q 023500 14 SGKLLATASFDATTCIWEDVGGDYECVATLE-GHE--NEVKSVSWNASGTLLATCG------RDKSVWIWEVMPGNEFEC 84 (281)
Q Consensus 14 ~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~-~h~--~~v~~v~~~~~~~~l~s~~------~d~~v~~w~~~~~~~~~~ 84 (281)
++..+..++.|+.|..+|..+++........ ... ..+.+--.- .+..++.++ .++.|..+|..+++....
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~ 205 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWR 205 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEE
Confidence 3566777888999999999887653322221 100 112111011 234444443 268999999987765332
Q ss_pred eEeecCC-----------------------------ccceeEEEecCCCCeEEEEecCC-------------------eE
Q 023500 85 VSVLQGH-----------------------------AQDVKMVQWHPTMDVLFSCSYDN-------------------TI 116 (281)
Q Consensus 85 ~~~~~~~-----------------------------~~~v~~v~~~p~~~~l~s~s~d~-------------------~v 116 (281)
....... ......+.+.|+..+++.++.++ +|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv 285 (677)
T 1kb0_A 206 WFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASI 285 (677)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred eccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEE
Confidence 2211110 01113567888888888777664 47
Q ss_pred EEEeCCCCCCCCceeeeeeeeccCCc-------cccEEEEEEccCC---CEEEEeeCCCcEEEEeCCcccc
Q 023500 117 KVWWAEDTDSDNWHCVQTISESNNGH-------SSTIWALSFNAKG---DKLVSCSDDLTIKIWGADITRM 177 (281)
Q Consensus 117 ~~w~~~~~~~~~~~~~~~~~~~~~~h-------~~~v~~~~~~~~~---~~l~s~~~d~~i~~w~~~~~~~ 177 (281)
..+|.++.. ..|+ ++. ..| ...+..+....++ ..++.++.+|.+.++|.+.++.
T Consensus 286 ~AlD~~TG~-~~W~----~~~--~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~ 349 (677)
T 1kb0_A 286 VALDPDTGK-YKWH----YQE--TPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKF 349 (677)
T ss_dssp EEECTTTCC-EEEE----EES--STTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred EEEECCCCC-EEEE----Eec--CCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCE
Confidence 777665542 1111 110 011 1222233444466 6789999999999999876654
No 235
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.08 E-value=0.002 Score=49.83 Aligned_cols=207 Identities=12% Similarity=0.122 Sum_probs=111.1
Q ss_pred eeeecCCCCCe--eEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEecCCeEE
Q 023500 40 VATLEGHENEV--KSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIK 117 (281)
Q Consensus 40 ~~~~~~h~~~v--~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~ 117 (281)
+.++ .|+..- ..+.|+ ++.+..+.+.++.|++.|+.+++....+ +.. ..--..+.... +.++.+...++.+.
T Consensus 46 v~~~-phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~-~~FgeGit~~g-~~Ly~ltw~~~~v~ 119 (268)
T 3nok_A 46 IREY-PHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME--RLG-NIFAEGLASDG-ERLYQLTWTEGLLF 119 (268)
T ss_dssp EEEE-ECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE--ECT-TCCEEEEEECS-SCEEEEESSSCEEE
T ss_pred EEEE-cCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE--CCC-CcceeEEEEeC-CEEEEEEccCCEEE
Confidence 3444 455433 578887 4667788899999999999877654333 332 11112344433 23455556788999
Q ss_pred EEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeec-cc
Q 023500 118 VWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISG-YH 196 (281)
Q Consensus 118 ~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~-~~ 196 (281)
++|.++. +.+.++... + .-+.++ ++++.|+....+++|.++|.+..+.. ..+.. ..
T Consensus 120 V~D~~Tl-----~~~~ti~~~--~---eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~-----------~~I~V~~~ 176 (268)
T 3nok_A 120 TWSGMPP-----QRERTTRYS--G---EGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALV-----------GAVQVKLR 176 (268)
T ss_dssp EEETTTT-----EEEEEEECS--S---CCCCEE--EETTEEEEECSSSEEEEECTTTCCEE-----------EEEECEET
T ss_pred EEECCcC-----cEEEEEeCC--C---ceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEE-----------EEEEeCCC
Confidence 9987654 234444321 1 113344 56777777777889999997654321 11111 01
Q ss_pred Cc---ceEEEEeCCCceeeecCCCCcEEEEecccCCCcCCccceeeeee----ccCCCCCeeEEEEcCCCCeeEEEeCCC
Q 023500 197 DR---TIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKK----EKAHDMDVNSVQWSPGERRLLASASDD 269 (281)
Q Consensus 197 ~~---~v~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~----~~~h~~~v~~~~~~~~~~~~~~s~~~D 269 (281)
.. .+..+.|....+++.......+.+.+...+.+........+... ...-..-.+.|+|+|++.++++||-.
T Consensus 177 g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~- 255 (268)
T 3nok_A 177 GQPVELINELECANGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKL- 255 (268)
T ss_dssp TEECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETT-
T ss_pred CcccccccccEEeCCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCC-
Confidence 11 22345555444455555566777775544322110000000000 00112346899999988888888743
Q ss_pred CeEEEEEc
Q 023500 270 GMIKIWEL 277 (281)
Q Consensus 270 g~v~iw~~ 277 (281)
.=++|.+
T Consensus 256 -Wp~~~ev 262 (268)
T 3nok_A 256 -WPRLFEV 262 (268)
T ss_dssp -CSEEEEE
T ss_pred -CCceEEE
Confidence 3344443
No 236
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.01 E-value=0.0014 Score=50.68 Aligned_cols=155 Identities=9% Similarity=0.094 Sum_probs=91.5
Q ss_pred eeEEEEcCCCCEEEEeeCCC--cEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEE-EecCCCcEEEEEecCCCee
Q 023500 6 VRSCAWSPSGKLLATASFDA--TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLA-TCGRDKSVWIWEVMPGNEF 82 (281)
Q Consensus 6 i~~~~~~~~~~~l~tg~~d~--~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d~~v~~w~~~~~~~~ 82 (281)
...+.|+ ++.++.+.+.+| .|+.+|..+++......+. .........++++.|. ..-.++.+.++|....+..
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~---~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~ 120 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG---KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQV 120 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC---TTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC---CccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEE
Confidence 4567888 677778887776 8999999888653322222 3334433344455544 4456889999998766543
Q ss_pred EEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCcc-ccEEEEEEccCCCEEEEe
Q 023500 83 ECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHS-STIWALSFNAKGDKLVSC 161 (281)
Q Consensus 83 ~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~ 161 (281)
..+. ..+ ....+.+++..|+.+..+++|.++|.++.. ...++.....+.+ ..++.+.|. +++..+..
T Consensus 121 ~ti~-~~~-----eG~glt~dg~~L~~SdGs~~i~~iDp~T~~-----v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~ 188 (262)
T 3nol_A 121 RSFN-YDG-----EGWGLTHNDQYLIMSDGTPVLRFLDPESLT-----PVRTITVTAHGEELPELNELEWV-DGEIFANV 188 (262)
T ss_dssp EEEE-CSS-----CCCCEEECSSCEEECCSSSEEEEECTTTCS-----EEEEEECEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred EEEE-CCC-----CceEEecCCCEEEEECCCCeEEEEcCCCCe-----EEEEEEeccCCccccccceeEEE-CCEEEEEE
Confidence 2221 112 222233566766666667788888766532 2333332211222 334567775 66666666
Q ss_pred eCCCcEEEEeCCccc
Q 023500 162 SDDLTIKIWGADITR 176 (281)
Q Consensus 162 ~~d~~i~~w~~~~~~ 176 (281)
-.+..|.+.|.+.++
T Consensus 189 w~~~~I~vIDp~tG~ 203 (262)
T 3nol_A 189 WQTNKIVRIDPETGK 203 (262)
T ss_dssp TTSSEEEEECTTTCB
T ss_pred ccCCeEEEEECCCCc
Confidence 567789888887554
No 237
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.01 E-value=0.0035 Score=50.25 Aligned_cols=156 Identities=13% Similarity=0.086 Sum_probs=88.9
Q ss_pred ceeEEEEcC-CCCEEEEeeCCCcEEEEecCCCceeeeee-ecCC-CCCeeEEEEcC-CCCEEEEecC-------------
Q 023500 5 TVRSCAWSP-SGKLLATASFDATTCIWEDVGGDYECVAT-LEGH-ENEVKSVSWNA-SGTLLATCGR------------- 67 (281)
Q Consensus 5 ~i~~~~~~~-~~~~l~tg~~d~~i~lw~~~~~~~~~~~~-~~~h-~~~v~~v~~~~-~~~~l~s~~~------------- 67 (281)
....+++.+ +|+++++ ...+.+..++..++....+.. ..+. -...+.+++.| +|++.++-..
T Consensus 81 ~p~gi~~~~~~g~l~v~-d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~ 159 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYIV-DCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMD 159 (322)
T ss_dssp CEEEEEEETTTTEEEEE-ETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHH
T ss_pred CCceEEEcCCCCcEEEE-ECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehc
Confidence 367789998 6766654 444557788765543222221 1111 12467899999 9987776432
Q ss_pred ----CCcEEEEEecCCCeeEEeEeecCCccceeEEEecCCCCeE-EEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCc
Q 023500 68 ----DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVL-FSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGH 142 (281)
Q Consensus 68 ----d~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l-~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h 142 (281)
++.|..+|...+.. .. +...-...+.++++|+++.+ ++-+..+.|..+++........+. +.. .
T Consensus 160 ~~~~~g~v~~~d~~~~~~-~~---~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~---~~~-~--- 228 (322)
T 2fp8_A 160 TSDKTGRLIKYDPSTKET-TL---LLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEV---LVK-I--- 228 (322)
T ss_dssp HTCCCEEEEEEETTTTEE-EE---EEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEE---EEE-C---
T ss_pred ccCCCceEEEEeCCCCEE-EE---eccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccce---EEe-C---
Confidence 25566666533321 11 11112235678999999854 555667899998876432111111 111 1
Q ss_pred cccEEEEEEccCCCEEEEeeC----------CCcEEEEeCC
Q 023500 143 SSTIWALSFNAKGDKLVSCSD----------DLTIKIWGAD 173 (281)
Q Consensus 143 ~~~v~~~~~~~~~~~l~s~~~----------d~~i~~w~~~ 173 (281)
.. +..+++.+++.+.++... .+.|..+|.+
T Consensus 229 ~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~ 268 (322)
T 2fp8_A 229 PN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF 268 (322)
T ss_dssp SS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT
T ss_pred CC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC
Confidence 12 567899999986666543 3556677654
No 238
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.00 E-value=0.003 Score=49.18 Aligned_cols=198 Identities=9% Similarity=0.066 Sum_probs=114.3
Q ss_pred eeEEEEcCCCCEEEEeeC--CCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEE-EEecCCCcEEEEEecCCCee
Q 023500 6 VRSCAWSPSGKLLATASF--DATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLL-ATCGRDKSVWIWEVMPGNEF 82 (281)
Q Consensus 6 i~~~~~~~~~~~l~tg~~--d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~~~d~~v~~w~~~~~~~~ 82 (281)
...++|+|++.++++.+. ++.|.+.|..+++......+..+. ....+++. +..| ++.-.++.+.++|....+.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~-fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v- 98 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSY-FGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSN- 98 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTC-CEEEEEEE--TTEEEEEETTCSEEEEEETTTTEE-
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCc-ceEEEEEe--CCEEEEEEecCCEEEEEECCCCcE-
Confidence 467899999877766553 578999999888653322232221 22244444 4444 5556788999999865543
Q ss_pred EEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCcc-ccEEEEEEccCCCEEEEe
Q 023500 83 ECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHS-STIWALSFNAKGDKLVSC 161 (281)
Q Consensus 83 ~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~ 161 (281)
+..+..... ....++|++..++.+..+++|.++|.+... .+..+.....+.+ ..++.+.|. ++...+..
T Consensus 99 --~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~-----v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~ 168 (266)
T 2iwa_A 99 --IKNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFK-----LIKKHNVKYNGHRVIRLNELEYI-NGEVWANI 168 (266)
T ss_dssp --EEEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCC-----EEEEEECEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred --EEEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCc-----EEEEEEECCCCcccccceeEEEE-CCEEEEec
Confidence 223321111 123355677777766678899998775532 2333332111111 236678887 67666666
Q ss_pred eCCCcEEEEeCCccccccCCCCcccceeEEeecc----------cCcceEEEEeCCCc--eeeecCCCCcEEEEecc
Q 023500 162 SDDLTIKIWGADITRMQSGDGYASWRHLCTISGY----------HDRTIFSVHWSREG--IIASGAADDSVQFFVES 226 (281)
Q Consensus 162 ~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~--~~~~~~~d~~~~~~~~~ 226 (281)
..++.|.+.|.+..+.... ..+.+. .......+++++++ +++++.....+...+..
T Consensus 169 ~~~~~V~vID~~tg~V~~~---------I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~ 236 (266)
T 2iwa_A 169 WQTDCIARISAKDGTLLGW---------ILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLH 236 (266)
T ss_dssp TTSSEEEEEETTTCCEEEE---------EECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred CCCCeEEEEECCCCcEEEE---------EECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEe
Confidence 6678999999875432110 000000 01244678888764 67777777777666543
No 239
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.99 E-value=0.00036 Score=57.24 Aligned_cols=67 Identities=18% Similarity=-0.031 Sum_probs=48.0
Q ss_pred EEEEcCCCCEEEEee----------CCCcEEEEecCCCceeeeeeecCC-------CCCeeEEEEcCCCCEEEEecC--C
Q 023500 8 SCAWSPSGKLLATAS----------FDATTCIWEDVGGDYECVATLEGH-------ENEVKSVSWNASGTLLATCGR--D 68 (281)
Q Consensus 8 ~~~~~~~~~~l~tg~----------~d~~i~lw~~~~~~~~~~~~~~~h-------~~~v~~v~~~~~~~~l~s~~~--d 68 (281)
.++++|||+++..+. .++.|.+||..+.+. +.++.-. ...-..++|+|||++++.+.. +
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v--v~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~ 146 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP--IADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSS 146 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE--EEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSS
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE--EEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCC
Confidence 589999999877775 368899999987754 4444322 022357899999999887753 4
Q ss_pred CcEEE--EEe
Q 023500 69 KSVWI--WEV 76 (281)
Q Consensus 69 ~~v~~--w~~ 76 (281)
..+.+ +|.
T Consensus 147 ~~v~V~~iD~ 156 (368)
T 1mda_H 147 AAAGLSVPGA 156 (368)
T ss_dssp CEEEEEETTT
T ss_pred CeEEEEEEch
Confidence 56777 765
No 240
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.99 E-value=0.0024 Score=56.71 Aligned_cols=114 Identities=16% Similarity=0.196 Sum_probs=74.9
Q ss_pred EEEEcC-CCCEEEEeeCCC-----------cEEEEecCCCceeeeeeecC-CCCCeeEEEEcCCCCEEEEecC-CCcEEE
Q 023500 8 SCAWSP-SGKLLATASFDA-----------TTCIWEDVGGDYECVATLEG-HENEVKSVSWNASGTLLATCGR-DKSVWI 73 (281)
Q Consensus 8 ~~~~~~-~~~~l~tg~~d~-----------~i~lw~~~~~~~~~~~~~~~-h~~~v~~v~~~~~~~~l~s~~~-d~~v~~ 73 (281)
.+++.| ++++++.|+.+. .+.+||..++++..+..+.. +.....++++.++++.++.||. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 456777 899999988653 57889998887765554432 2333345778899999999984 558999
Q ss_pred EEecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEe-cC-----CeEEEEeCCC
Q 023500 74 WEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCS-YD-----NTIKVWWAED 123 (281)
Q Consensus 74 w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s-~d-----~~v~~w~~~~ 123 (281)
||.... .+..+..+... ..-.++...+++++++.|+ .+ ..+.+||...
T Consensus 270 yd~~t~-~W~~~~~~~~~-R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 270 YDSSSD-SWIPGPDMQVA-RGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp EEGGGT-EEEECCCCSSC-CSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred ecCcCC-ceeECCCCCcc-ccccceEEecCCeEEEEeCcccCCcccccceEeCCCC
Confidence 998643 33332222211 1113445667888888888 44 4688888754
No 241
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.98 E-value=0.0012 Score=58.90 Aligned_cols=162 Identities=10% Similarity=0.143 Sum_probs=88.2
Q ss_pred CCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcC---CCCEEEEec-----CCCcEEEEEecCCCeeEEeE
Q 023500 15 GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA---SGTLLATCG-----RDKSVWIWEVMPGNEFECVS 86 (281)
Q Consensus 15 ~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~~l~s~~-----~d~~v~~w~~~~~~~~~~~~ 86 (281)
+..++.++.|+.|..+|..+++.........+......+..+| ++..++..+ .++.|..||..+++......
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 4567788899999999998887543332210111111111122 444444332 37899999998876533322
Q ss_pred eecC----------------------------CccceeEEEecCCCCeEEEEecCCe-------------------EEEE
Q 023500 87 VLQG----------------------------HAQDVKMVQWHPTMDVLFSCSYDNT-------------------IKVW 119 (281)
Q Consensus 87 ~~~~----------------------------~~~~v~~v~~~p~~~~l~s~s~d~~-------------------v~~w 119 (281)
...+ +...-..+.+.|+..+++.++.++. |..+
T Consensus 201 ~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~Al 280 (689)
T 1yiq_A 201 TVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAV 280 (689)
T ss_dssp SSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEE
T ss_pred ccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 1110 0011125678888888888887764 8888
Q ss_pred eCCCCCCCCceeeeeeeec-cCCccccEEEEEEccCCC---EEEEeeCCCcEEEEeCCcccc
Q 023500 120 WAEDTDSDNWHCVQTISES-NNGHSSTIWALSFNAKGD---KLVSCSDDLTIKIWGADITRM 177 (281)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~---~l~s~~~d~~i~~w~~~~~~~ 177 (281)
|.++... .|+........ .......+.......+++ .++.++.+|.+.++|.+.++.
T Consensus 281 D~~TG~~-~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 341 (689)
T 1yiq_A 281 NADTGEY-VWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGEL 341 (689)
T ss_dssp ETTTCCE-EEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred EccCCce-eEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCE
Confidence 8776431 12111000000 000112222223333554 788899999999999876654
No 242
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.95 E-value=0.0063 Score=51.06 Aligned_cols=155 Identities=10% Similarity=0.095 Sum_probs=88.0
Q ss_pred eeEEEEcC-CCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecC-CC---cEEEEEecCCC
Q 023500 6 VRSCAWSP-SGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR-DK---SVWIWEVMPGN 80 (281)
Q Consensus 6 i~~~~~~~-~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d~---~v~~w~~~~~~ 80 (281)
...++++| ++..|..+...+.|..+|..++... .+......-..++|+++|++|+.+.. ++ ...+|-...+.
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~---~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~ 215 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVS---TVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESG 215 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEE---EEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGT
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEE---EEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCc
Confidence 46789998 3444434444477888887765433 22223345678999999995555443 22 12233222222
Q ss_pred eeEEeEeecCCccceeEEEecC-CCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEE-
Q 023500 81 EFECVSVLQGHAQDVKMVQWHP-TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKL- 158 (281)
Q Consensus 81 ~~~~~~~~~~~~~~v~~v~~~p-~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l- 158 (281)
. .....+. .......++++| ++.++++-..++.|..++.+... ...+... +.......++|+|++++|
T Consensus 216 ~-~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~------~~~~~~~--~~~~~P~gia~~pdG~~ly 285 (430)
T 3tc9_A 216 F-KVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQE------TTPLFTI--QDSGWEFHIQFHPSGNYAY 285 (430)
T ss_dssp S-CSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTE------EEEEEEC--SSSSCCEEEEECTTSSEEE
T ss_pred e-eeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCc------EEEEEEc--CCCCcceeEEEcCCCCEEE
Confidence 1 1011111 122356788999 66777776677889888765431 1111111 111346789999999944
Q ss_pred EEeeCCCcEEEEeCC
Q 023500 159 VSCSDDLTIKIWGAD 173 (281)
Q Consensus 159 ~s~~~d~~i~~w~~~ 173 (281)
++-...+.|..++.+
T Consensus 286 v~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 286 IVVVNQHYILRSDYD 300 (430)
T ss_dssp EEETTTTEEEEEEEE
T ss_pred EEECCCCEEEEEeCC
Confidence 444567788887654
No 243
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.94 E-value=0.0026 Score=56.65 Aligned_cols=74 Identities=7% Similarity=0.105 Sum_probs=50.7
Q ss_pred EEEEcCCCCEEEEeeCCC-------------------cEEEEecCCCceeeeeeecCCC-------CCeeEEEEcCCC--
Q 023500 8 SCAWSPSGKLLATASFDA-------------------TTCIWEDVGGDYECVATLEGHE-------NEVKSVSWNASG-- 59 (281)
Q Consensus 8 ~~~~~~~~~~l~tg~~d~-------------------~i~lw~~~~~~~~~~~~~~~h~-------~~v~~v~~~~~~-- 59 (281)
.++++|++.++..+..++ .|..+|..+++.........|. .....+....+|
T Consensus 247 ~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~ 326 (677)
T 1kb0_A 247 SMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKP 326 (677)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEE
T ss_pred ceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcE
Confidence 567899888877776553 4888898888755444443342 112233444477
Q ss_pred -CEEEEecCCCcEEEEEecCCCe
Q 023500 60 -TLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 60 -~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
..++.++.+|.+.++|..+++.
T Consensus 327 ~~~l~~~~~~G~l~~lD~~tG~~ 349 (677)
T 1kb0_A 327 RKVILHAPKNGFFFVLDRTNGKF 349 (677)
T ss_dssp EEEEEECCTTSEEEEEETTTCCE
T ss_pred eeEEEEECCCCEEEEEECCCCCE
Confidence 6789999999999999887764
No 244
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.93 E-value=0.0056 Score=54.67 Aligned_cols=73 Identities=12% Similarity=0.012 Sum_probs=46.1
Q ss_pred EEEEcCCCCEEEEecCCCc-------------------EEEEEecCCCeeEEeEeecCCc-------cceeEEEecCCCC
Q 023500 52 SVSWNASGTLLATCGRDKS-------------------VWIWEVMPGNEFECVSVLQGHA-------QDVKMVQWHPTMD 105 (281)
Q Consensus 52 ~v~~~~~~~~l~s~~~d~~-------------------v~~w~~~~~~~~~~~~~~~~~~-------~~v~~v~~~p~~~ 105 (281)
.++++|+..+++.+..++. |..+|..+++...... ...|. ..........++.
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~-~~~~d~wd~~~~~~~~l~d~~~~G~ 317 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQ-TTPGDAWDYTATQHMILAELPIDGK 317 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEE-SSTTCCSCCCCCSCEEEEEEEETTE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeee-cCCcccccccCCCCcEEEeeccCCc
Confidence 5788898888888877653 9999998776433221 11121 1111222222443
Q ss_pred ---eEEEEecCCeEEEEeCCCCC
Q 023500 106 ---VLFSCSYDNTIKVWWAEDTD 125 (281)
Q Consensus 106 ---~l~s~s~d~~v~~w~~~~~~ 125 (281)
.++.++.+|.++++|.++..
T Consensus 318 ~~~~v~~~~~~G~l~~lD~~tG~ 340 (689)
T 1yiq_A 318 PRKVLMQAPKNGFFYVIDRATGE 340 (689)
T ss_dssp EEEEEEECCTTSEEEEEETTTCC
T ss_pred EEEEEEEECCCCeEEEEECCCCC
Confidence 68889999999999876653
No 245
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.92 E-value=0.004 Score=48.12 Aligned_cols=168 Identities=13% Similarity=0.189 Sum_probs=100.4
Q ss_pred cceeEEEEcCCCC-EEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCee
Q 023500 4 RTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEF 82 (281)
Q Consensus 4 ~~i~~~~~~~~~~-~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~ 82 (281)
+.+..++|+|++. +++....++.|...|.. ++......+.+. .....|++.+++.++++.-.++.+.++++......
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~-~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i 104 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFV-KDLETIEYIGDNQFVISDERDYAIYVISLTPNSEV 104 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSC-SSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCE
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCC-CChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCee
Confidence 4588999999765 55667777788777776 443222223332 45678888888887777666788888888655431
Q ss_pred EEeEee------cCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCC-CCceeeeeeeeccCCccccEEEEEEccCC
Q 023500 83 ECVSVL------QGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDS-DNWHCVQTISESNNGHSSTIWALSFNAKG 155 (281)
Q Consensus 83 ~~~~~~------~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~-~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 155 (281)
..+... .........++|.|.++.|+++.+.....+|.+..... ...............+...+.+++++|..
T Consensus 105 ~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~t 184 (255)
T 3qqz_A 105 KILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQK 184 (255)
T ss_dssp EEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTT
T ss_pred eeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCC
Confidence 111111 12344568999999998887777776666665542100 00010000000001123346789999865
Q ss_pred C-EEEEeeCCCcEEEEeCC
Q 023500 156 D-KLVSCSDDLTIKIWGAD 173 (281)
Q Consensus 156 ~-~l~s~~~d~~i~~w~~~ 173 (281)
. +++....+..+..+|.+
T Consensus 185 g~lliLS~~s~~L~~~d~~ 203 (255)
T 3qqz_A 185 NTLLVLSHESRALQEVTLV 203 (255)
T ss_dssp TEEEEEETTTTEEEEECTT
T ss_pred CeEEEEECCCCeEEEEcCC
Confidence 4 45555566677788765
No 246
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.91 E-value=0.0019 Score=58.34 Aligned_cols=114 Identities=13% Similarity=0.111 Sum_probs=66.5
Q ss_pred CeeEEEEc-CCCCEEEEec-C----CCcEEEEEecCC-CeeEEeEeecCCccceeEEEecCCCCeEEEEecCC-----eE
Q 023500 49 EVKSVSWN-ASGTLLATCG-R----DKSVWIWEVMPG-NEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN-----TI 116 (281)
Q Consensus 49 ~v~~v~~~-~~~~~l~s~~-~----d~~v~~w~~~~~-~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~-----~v 116 (281)
.+...+|| |||++|+-+. . ..+|+++|+..+ .... ..+ ......+.|+|+++.|+..+.|. .|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~--~~~---~~~~~~~~WspDg~~l~y~~~d~~~~~~~v 249 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA--DKV---SGTNGEIVWGPDHTSLFYVTKDETLRENKV 249 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC--CCE---EEECSCCEECSSTTEEEEEEECTTCCEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC--ccc---cCceeeEEEecCCCEEEEEEECCCCCCCEE
Confidence 57788999 9999877332 2 235999998766 4110 011 11235788999998877666652 56
Q ss_pred EEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeC---CCcEEEEeCC
Q 023500 117 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD---DLTIKIWGAD 173 (281)
Q Consensus 117 ~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---d~~i~~w~~~ 173 (281)
+++++....... ..+ ... ........+.|+||+++|+.... ...|.++|.+
T Consensus 250 ~~~~lgt~~~~~-~lv--~~~---~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~ 303 (751)
T 2xe4_A 250 WRHVMGKLQSED-VCL--YEE---HNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLR 303 (751)
T ss_dssp EEEETTSCGGGC-EEE--EEC---CCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESS
T ss_pred EEEECCCCchhc-EEE--Eec---CCCceEEEEEECCCCCEEEEEecCCCCceEEEEECC
Confidence 667665432111 111 111 11233457899999998776542 2345556654
No 247
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.85 E-value=0.0067 Score=48.23 Aligned_cols=238 Identities=14% Similarity=0.112 Sum_probs=121.2
Q ss_pred ceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCC--cEEEEEecCCCee
Q 023500 5 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDK--SVWIWEVMPGNEF 82 (281)
Q Consensus 5 ~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~--~v~~w~~~~~~~~ 82 (281)
....++|+++|+++++-...+.|..||..+. ...... -.+....+++.++|+++++..... .|..++...+..
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~---~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~- 107 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT---VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV- 107 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE---CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE-
T ss_pred CcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe---CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE-
Confidence 3567899999998888767888999987653 222222 234678999999999766654433 355555444332
Q ss_pred EEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeee-ccCCccccEEEEEEccCCCEEEE-
Q 023500 83 ECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISE-SNNGHSSTIWALSFNAKGDKLVS- 160 (281)
Q Consensus 83 ~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~s- 160 (281)
..+.... .......+...+.+..+++-+.++.|..++........+.....+.. .....-...+.+ +++++.|+.
T Consensus 108 ~~~~~~~-~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~ 184 (306)
T 2p4o_A 108 ETLLTLP-DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVS 184 (306)
T ss_dssp EEEEECT-TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEE
T ss_pred EEEEeCC-CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEE
Confidence 2222221 11122344444555556665567888877654321000000000000 000111234455 788765544
Q ss_pred eeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCce-eeecCCCCcEEEEecccCCCcCCccceee
Q 023500 161 CSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSVQFFVESKDDLIDGPSYKML 239 (281)
Q Consensus 161 ~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 239 (281)
-...+.|..|+.+.... ....+ .+.. ......++++++|. +++...++.+..++... .. ..
T Consensus 185 d~~~~~I~~~~~~~~g~-----~~~~~---~~~~--~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~G------~~--~~ 246 (306)
T 2p4o_A 185 NTEKMLLLRIPVDSTDK-----PGEPE---IFVE--QTNIDDFAFDVEGNLYGATHIYNSVVRIAPDR------ST--TI 246 (306)
T ss_dssp ETTTTEEEEEEBCTTSC-----BCCCE---EEEE--SCCCSSEEEBTTCCEEEECBTTCCEEEECTTC------CE--EE
T ss_pred eCCCCEEEEEEeCCCCC-----CCccE---EEec--cCCCCCeEECCCCCEEEEeCCCCeEEEECCCC------CE--EE
Confidence 45567898888753100 00001 1110 01233455666664 44444456777775421 11 11
Q ss_pred eeeccCCCCCeeEEEEc---CCCCeeEEEeCC
Q 023500 240 LKKEKAHDMDVNSVQWS---PGERRLLASASD 268 (281)
Q Consensus 240 ~~~~~~h~~~v~~~~~~---~~~~~~~~s~~~ 268 (281)
...........++++|. |++..++++.+.
T Consensus 247 ~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 247 IAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp EECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred EeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 11111223458899998 777777776553
No 248
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.83 E-value=0.0063 Score=47.25 Aligned_cols=194 Identities=10% Similarity=0.064 Sum_probs=110.2
Q ss_pred eeEEEEcCCCC-EEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCE-EEEecCCCcEEEEEecCCCeeE
Q 023500 6 VRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL-LATCGRDKSVWIWEVMPGNEFE 83 (281)
Q Consensus 6 i~~~~~~~~~~-~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~-l~s~~~d~~v~~w~~~~~~~~~ 83 (281)
+..++|+|+++ ++++-...+.|..++..+.... ..+...-.....++++|++.. .++-...+.|.++++..... .
T Consensus 38 ~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~--~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~ 114 (267)
T 1npe_A 38 IIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT--TIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-R 114 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE--EEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-E
T ss_pred EEEEEEecCCCEEEEEECCCCEEEEEecCCCCcE--EEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-E
Confidence 45788999655 5555556778999987655322 122222245688999997554 55556678898888753221 1
Q ss_pred EeEeecCCccceeEEEecCCCCeEEEEec---CCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEE
Q 023500 84 CVSVLQGHAQDVKMVQWHPTMDVLFSCSY---DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 160 (281)
Q Consensus 84 ~~~~~~~~~~~v~~v~~~p~~~~l~s~s~---d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 160 (281)
.+ ..........++++|++..++.+.. .+.|..++++... ...+.. ........+++++++..|+.
T Consensus 115 ~~--~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~------~~~~~~---~~~~~P~gia~d~~~~~lyv 183 (267)
T 1npe_A 115 VL--FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN------RRILAQ---DNLGLPNGLTFDAFSSQLCW 183 (267)
T ss_dssp EE--ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC------CEEEEC---TTCSCEEEEEEETTTTEEEE
T ss_pred EE--EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC------cEEEEE---CCCCCCcEEEEcCCCCEEEE
Confidence 11 1112234678999996555444443 3678777664321 111111 11234678999998765544
Q ss_pred -eeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecCCCCcEEEEecc
Q 023500 161 -CSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVES 226 (281)
Q Consensus 161 -~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~~~~~~~~ 226 (281)
-...+.|..++.+..... ..... ......++...+.++++...++.+..++..
T Consensus 184 ~d~~~~~I~~~~~~g~~~~-----------~~~~~--~~~P~gi~~d~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 184 VDAGTHRAECLNPAQPGRR-----------KVLEG--LQYPFAVTSYGKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp EETTTTEEEEEETTEEEEE-----------EEEEC--CCSEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred EECCCCEEEEEecCCCceE-----------EEecC--CCCceEEEEeCCEEEEEECCCCeEEEEeCC
Confidence 445678999887632110 01111 122345555555566666666777777553
No 249
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.82 E-value=1.7e-06 Score=71.41 Aligned_cols=148 Identities=9% Similarity=0.054 Sum_probs=68.0
Q ss_pred EEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCC-CeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEEeEe
Q 023500 9 CAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHEN-EVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSV 87 (281)
Q Consensus 9 ~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~-~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~ 87 (281)
..+..+++++++++.|+.|..||..+++.. ..+..+.. .+.+......+..+++++.|+.+..||..+++.. ..
T Consensus 43 ~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~--w~~~~~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~---w~ 117 (369)
T 2hz6_A 43 VPTHVEEPAFLPDPNDGSLYTLGSKNNEGL--TKLPFTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQ---QT 117 (369)
T ss_dssp CC-----CCEEECTTTCCEEEC-----CCS--EECSCCHHHHHTTCSCC-----CCCCEEEEEEEEECCC----------
T ss_pred cceEcCCCEEEEeCCCCEEEEEECCCCcee--eeeeccCccccccCceEecCCEEEEEeCCCEEEEEECCCCcEE---EE
Confidence 344557778888889999999998666432 12221211 1110000013456788888999999998776532 22
Q ss_pred ecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCC---CEEEEeeCC
Q 023500 88 LQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG---DKLVSCSDD 164 (281)
Q Consensus 88 ~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~s~~~d 164 (281)
+..+. ...++|++..+++++.|+.|+.||..+... .|+.. .. ......+.++. ..++.++.|
T Consensus 118 ~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~-~W~~~--~~--------~~~~~~~~~~~~~~~~v~~~~~d 182 (369)
T 2hz6_A 118 LSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTREL-RWNAT--YF--------DYAASLPEDDVDYKMSHFVSNGD 182 (369)
T ss_dssp -------------------EEEEEEEEEEECCCSSSSSC-CCEEE--EE--------EECCBCCCCCTTCCCCEEEEETS
T ss_pred ecCCC----cccccccCCEEEEEecCCEEEEEECCCCCE-EEeEe--cc--------cccCccccCCccccceEEEECCC
Confidence 22222 234567888899999999999998765431 12111 10 01111222221 457778889
Q ss_pred CcEEEEeCCccc
Q 023500 165 LTIKIWGADITR 176 (281)
Q Consensus 165 ~~i~~w~~~~~~ 176 (281)
|.+..||.+.++
T Consensus 183 g~v~a~d~~tG~ 194 (369)
T 2hz6_A 183 GLVVTVDSESGD 194 (369)
T ss_dssp CEEEEECTTTCC
T ss_pred CEEEEEECCCCc
Confidence 999999876543
No 250
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.79 E-value=0.0092 Score=48.01 Aligned_cols=234 Identities=11% Similarity=0.159 Sum_probs=116.8
Q ss_pred cceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeee-ecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecC-CCe
Q 023500 4 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVAT-LEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMP-GNE 81 (281)
Q Consensus 4 ~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~-~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~-~~~ 81 (281)
..+.++.|.+.+..++. +..+.|.........+..+.. .......+.+|.|.| +. +..++.++.| +.... ++.
T Consensus 36 ~~~~~v~~~~~~~~~~~-G~~g~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~-~~~~g~~g~i--~~S~DgG~t 110 (327)
T 2xbg_A 36 ATILDMSFIDRHHGWLV-GVNATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NE-GWIVGEPPIM--LHTTDGGQS 110 (327)
T ss_dssp SCEEEEEESSSSCEEEE-ETTTEEEEESSTTSSCEECCCCCSCCCCEEEEEEEET-TE-EEEEEETTEE--EEESSTTSS
T ss_pred CcEEEEEECCCCcEEEE-cCCCeEEEeCCCCCCCeECCCCCCCCCccEEEEEecC-Ce-EEEEECCCeE--EEECCCCCC
Confidence 45788999888888875 456655333222233333321 112345788999986 33 4444555643 33333 444
Q ss_pred eEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEe
Q 023500 82 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 161 (281)
Q Consensus 82 ~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 161 (281)
++.+.....+...+..+.+.+++..++.+ .++.|..- .+ .-..|..+.. +....+..+.+.+++.+++.+
T Consensus 111 W~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S--~D-gG~tW~~~~~------~~~~~~~~~~~~~~~~~~~~g 180 (327)
T 2xbg_A 111 WSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRT--KD-SGKNWQALVQ------EAIGVMRNLNRSPSGEYVAVS 180 (327)
T ss_dssp CEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEE--SS-TTSSEEEEEC------SCCCCEEEEEECTTSCEEEEE
T ss_pred ceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEEE--cC-CCCCCEEeec------CCCcceEEEEEcCCCcEEEEE
Confidence 44332221223346667766666555544 56654321 11 1123433321 234567889999988877766
Q ss_pred eCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecCCCCcEEEEecccCCCcCCccceeeee
Q 023500 162 SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLK 241 (281)
Q Consensus 162 ~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 241 (281)
...+.++-.|-. -..|+... ......+..+.+.+++.+.+.+.++.+.+...... ..... ..
T Consensus 181 ~~G~~~~S~d~g---------G~tW~~~~---~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G-----~tW~~-~~ 242 (327)
T 2xbg_A 181 SRGSFYSTWEPG---------QTAWEPHN---RTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNS-----ENWGE-LL 242 (327)
T ss_dssp TTSSEEEEECTT---------CSSCEEEE---CCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEE-----EEECC-CB
T ss_pred CCCcEEEEeCCC---------CCceeECC---CCCCCccceeEECCCCCEEEEeCCceEEEecCCCC-----CeeEe-cc
Confidence 544433333321 12233321 11234566677777776666666676555421100 00000 11
Q ss_pred ec-cCCCCCeeEEEEcCCCCeeEEEeCCCCeE
Q 023500 242 KE-KAHDMDVNSVQWSPGERRLLASASDDGMI 272 (281)
Q Consensus 242 ~~-~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v 272 (281)
.. ..+...+.++.+.+++ .+++.+. +|.|
T Consensus 243 ~~~~~~~~~~~~v~~~~~~-~~~~~g~-~g~i 272 (327)
T 2xbg_A 243 SPLRRNSVGFLDLAYRTPN-EVWLAGG-AGAL 272 (327)
T ss_dssp CTTSSCCSCEEEEEESSSS-CEEEEES-TTCE
T ss_pred CCcccCCcceEEEEecCCC-EEEEEeC-CCeE
Confidence 01 1123457888888765 3555544 5655
No 251
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.73 E-value=0.0046 Score=49.34 Aligned_cols=184 Identities=12% Similarity=0.018 Sum_probs=104.6
Q ss_pred eeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEEe
Q 023500 6 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECV 85 (281)
Q Consensus 6 i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~ 85 (281)
+..+...++|.++ .|+.++.+..+|.. ++. ...+......+.++.+.+++...+.. +.+..+| ..+.. .
T Consensus 139 ~~~~~~~~~g~l~-vgt~~~~l~~~d~~-g~~--~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~---~ 207 (330)
T 3hxj_A 139 YATPIVSEDGTIY-VGSNDNYLYAINPD-GTE--KWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTE---K 207 (330)
T ss_dssp CSCCEECTTSCEE-EECTTSEEEEECTT-SCE--EEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCE---E
T ss_pred eeeeEEcCCCEEE-EEcCCCEEEEECCC-CCE--eEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcE---E
Confidence 4455667777755 46778889999877 443 22333344566777777777766554 7788888 44432 2
Q ss_pred EeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeCCC
Q 023500 86 SVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDL 165 (281)
Q Consensus 86 ~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~ 165 (281)
.........+.++...+++. +..++.++.+..++.... .+..... ....+..+.+.+++ .|..++.+|
T Consensus 208 ~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~g~------~~~~~~~----~~~~~~~~~~~~~g-~l~v~t~~g 275 (330)
T 3hxj_A 208 WNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINPDGT------EKWRFKT----GKRIESSPVIGNTD-TIYFGSYDG 275 (330)
T ss_dssp EEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECTTSC------EEEEEEC----SSCCCSCCEECTTS-CEEEECTTC
T ss_pred EEEccCCcceeceEECCCCe-EEEEcCCCeEEEECCCCC------EeEEeeC----CCCccccceEcCCC-eEEEecCCC
Confidence 22333345577777877765 445566788877753211 1111111 11112234444455 566777887
Q ss_pred cEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecCCCCcEEEEec
Q 023500 166 TIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVE 225 (281)
Q Consensus 166 ~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~~~~~~~ 225 (281)
.+..+|.+ ++. ..... .....+.++..++++.+..++.+|.+.+...
T Consensus 276 gl~~~d~~-g~~-----------~~~~~-~~~~~~~~~~~d~~g~l~~gt~~G~~~~~~~ 322 (330)
T 3hxj_A 276 HLYAINPD-GTE-----------KWNFE-TGSWIIATPVIDENGTIYFGTRNGKFYALFN 322 (330)
T ss_dssp EEEEECTT-SCE-----------EEEEE-CSSCCCSCCEECTTCCEEEECTTSCEEEEEC
T ss_pred CEEEECCC-CcE-----------EEEEE-cCCccccceEEcCCCEEEEEcCCCeEEEEec
Confidence 88888753 211 00111 1123344455567777888888888877733
No 252
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.61 E-value=0.015 Score=46.58 Aligned_cols=161 Identities=9% Similarity=0.149 Sum_probs=99.6
Q ss_pred eEEEEcCCCC-EEEEeeCCCcEEEEecCCCceeeeeeecC----CCC--CeeEEEE---cCCCCEEEEec----------
Q 023500 7 RSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEG----HEN--EVKSVSW---NASGTLLATCG---------- 66 (281)
Q Consensus 7 ~~~~~~~~~~-~l~tg~~d~~i~lw~~~~~~~~~~~~~~~----h~~--~v~~v~~---~~~~~~l~s~~---------- 66 (281)
-+++|++.+. ++++.-..+.|..|+..++..+.+ .+.+ .+. .+..+.| .|+++++++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 3678988555 454444789999999875544333 3332 111 3578999 68877776433
Q ss_pred ---CCCcEEEEEec---CCCeeEEeEeecCC-----------ccceeEEEecCCCCeEEEEecC-CeEEEEeCCCCCCCC
Q 023500 67 ---RDKSVWIWEVM---PGNEFECVSVLQGH-----------AQDVKMVQWHPTMDVLFSCSYD-NTIKVWWAEDTDSDN 128 (281)
Q Consensus 67 ---~d~~v~~w~~~---~~~~~~~~~~~~~~-----------~~~v~~v~~~p~~~~l~s~s~d-~~v~~w~~~~~~~~~ 128 (281)
.+..|..+|+. .++.... ..+... ....+.+...++++.+++++.- +.|...+........
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~-~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~ 173 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWS-VNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVST 173 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEE-EESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEE
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEE-ecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEee
Confidence 25778889987 4443221 122211 1247889999999999999988 876655443221110
Q ss_pred ceeeeeeeeccCCccccEEEEEEccCCCEEEEeeCCCcEEEEeCC
Q 023500 129 WHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 173 (281)
Q Consensus 129 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~ 173 (281)
+ .+...........+.++++|++..|+.....+.+.-+|++
T Consensus 174 ~----~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 174 F----AWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp E----EECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred e----eecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 1 1111111122335689999999988887779999999876
No 253
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.54 E-value=0.048 Score=49.48 Aligned_cols=198 Identities=9% Similarity=0.073 Sum_probs=112.1
Q ss_pred cceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeec--CCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCe
Q 023500 4 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLE--GHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 4 ~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~ 81 (281)
..|.++...++|++|-.|..++.|.+|+..++.+....... .....|.++...++|.+.+... + -+..|+.... .
T Consensus 406 ~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~-Gl~~~~~~~~-~ 482 (795)
T 4a2l_A 406 NNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-S-ALVRFNPEQR-S 482 (795)
T ss_dssp SCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-S-CEEEEETTTT-E
T ss_pred ccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-C-ceeEEeCCCC-e
Confidence 56888999889984456777777999998776543322100 1345789999888888655544 3 4777886433 2
Q ss_pred eEEeEee----cCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeee---eccCCccccEEEEEEccC
Q 023500 82 FECVSVL----QGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTIS---ESNNGHSSTIWALSFNAK 154 (281)
Q Consensus 82 ~~~~~~~----~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~---~~~~~h~~~v~~~~~~~~ 154 (281)
....... .-....|.++...+++.+.+.+. +-+..|+..... . .+. .........|.++...++
T Consensus 483 ~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~-----~--~~~~~~~~~~l~~~~i~~i~~d~~ 553 (795)
T 4a2l_A 483 FTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLD-----I--QKASILPVSNVTKLFTNCIYEASN 553 (795)
T ss_dssp EEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTE-----E--EECCCSCSCGGGGSCEEEEEECTT
T ss_pred EEEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCe-----E--EEecCCCCCCCCCCeeEEEEECCC
Confidence 2111111 01235688888888887666544 456667654321 1 111 000112356888988888
Q ss_pred CCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecCCCCcEEEEec
Q 023500 155 GDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVE 225 (281)
Q Consensus 155 ~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~~~~~~~ 225 (281)
+...++. ..| +..||.+..... ......+.....+.++..+++|.+-.++.+| +..++.
T Consensus 554 g~lWigT-~~G-l~~~d~~~~~~~---------~~~~~~gl~~~~i~~i~~d~~g~lWi~t~~G-l~~~~~ 612 (795)
T 4a2l_A 554 GIIWVGT-REG-FYCFNEKDKQIK---------RYNTTNGLPNNVVYGILEDSFGRLWLSTNRG-ISCFNP 612 (795)
T ss_dssp SCEEEEE-SSC-EEEEETTTTEEE---------EECGGGTCSCSCEEEEEECTTSCEEEEETTE-EEEEET
T ss_pred CCEEEEe-CCC-ceeECCCCCcEE---------EeCCCCCCchhheEEEEECCCCCEEEEcCCc-eEEEcC
Confidence 8765544 345 777776532211 0000011223457778778777665555544 444544
No 254
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.51 E-value=0.025 Score=45.49 Aligned_cols=238 Identities=8% Similarity=0.115 Sum_probs=120.3
Q ss_pred ceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecC-CCeeE
Q 023500 5 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMP-GNEFE 83 (281)
Q Consensus 5 ~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~-~~~~~ 83 (281)
.+..+.|++ ++.++. +.++.|..-+.....+..+.....+.+.+..+.+.+++..++.+. ++.| |.... +..++
T Consensus 81 ~~~~i~~~~-~~~~~~-g~~g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v--~~S~DgG~tW~ 155 (327)
T 2xbg_A 81 RFNSVSFQG-NEGWIV-GEPPIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAI--YRTKDSGKNWQ 155 (327)
T ss_dssp EEEEEEEET-TEEEEE-EETTEEEEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEET-TCCE--EEESSTTSSEE
T ss_pred cEEEEEecC-CeEEEE-ECCCeEEEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeC-CccE--EEEcCCCCCCE
Confidence 577888886 555554 456655443222333433332223445678888877776666554 5543 33333 44554
Q ss_pred EeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeC
Q 023500 84 CVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 163 (281)
Q Consensus 84 ~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 163 (281)
.+. ......+..+.+.|++.+++.+ .++.+..-+ +..-..|+.+. ......+..+.+.+++..++ .+.
T Consensus 156 ~~~--~~~~~~~~~~~~~~~~~~~~~g-~~G~~~~S~--d~gG~tW~~~~------~~~~~~~~~~~~~~~g~~~~-~~~ 223 (327)
T 2xbg_A 156 ALV--QEAIGVMRNLNRSPSGEYVAVS-SRGSFYSTW--EPGQTAWEPHN------RTTSRRLHNMGFTPDGRLWM-IVN 223 (327)
T ss_dssp EEE--CSCCCCEEEEEECTTSCEEEEE-TTSSEEEEE--CTTCSSCEEEE------CCSSSCEEEEEECTTSCEEE-EET
T ss_pred Eee--cCCCcceEEEEEcCCCcEEEEE-CCCcEEEEe--CCCCCceeECC------CCCCCccceeEECCCCCEEE-EeC
Confidence 432 2344568889999987776655 455543321 11112343321 12345678888988886554 456
Q ss_pred CCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecCCCCcEEEEecccCCCcCCccceeeeeec
Q 023500 164 DLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKE 243 (281)
Q Consensus 164 d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (281)
+|.+.....+.++ .|.....-.......+..+.+.+++.+++++.++.+..- ... +.... .....
T Consensus 224 ~G~~~~s~~D~G~--------tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i~~S-~Dg-----G~tW~-~~~~~ 288 (327)
T 2xbg_A 224 GGKIAFSDPDNSE--------NWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGALLCS-QDG-----GQTWQ-QDVDV 288 (327)
T ss_dssp TTEEEEEETTEEE--------EECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCEEEE-SST-----TSSCE-ECGGG
T ss_pred CceEEEecCCCCC--------eeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeEEEe-CCC-----CcccE-EcCcc
Confidence 7777665322111 111110000001123567777766655555556655322 111 11111 11111
Q ss_pred cCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEE
Q 023500 244 KAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 276 (281)
Q Consensus 244 ~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~ 276 (281)
......+.++.|.+++ . ++.++.+|.|.-++
T Consensus 289 ~~~~~~~~~v~~~~~~-~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 289 KKVPSNFYKILFFSPD-Q-GFILGQKGILLRYV 319 (327)
T ss_dssp TTSSSCCCEEEEEETT-E-EEEECSTTEEEEEC
T ss_pred CCCCCCeEEEEEECCC-c-eEEEcCCceEEEEc
Confidence 1223457888887544 3 44566789876654
No 255
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.42 E-value=0.067 Score=48.43 Aligned_cols=200 Identities=9% Similarity=0.060 Sum_probs=110.2
Q ss_pred cceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeE
Q 023500 4 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFE 83 (281)
Q Consensus 4 ~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~ 83 (281)
..|.++...++|.+.+ |..++.+..++..++.+............|.++...++|.+.+... +-+..++.....- .
T Consensus 407 ~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~-~ 482 (781)
T 3v9f_A 407 NSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH--AGVFVIDLASKKV-I 482 (781)
T ss_dssp SBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET--TEEEEEESSSSSC-C
T ss_pred cceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC--CceEEEeCCCCeE-E
Confidence 5688888888888765 6666678888876665432211012346788988888777655443 4477787654321 1
Q ss_pred EeEeec---CCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEE
Q 023500 84 CVSVLQ---GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 160 (281)
Q Consensus 84 ~~~~~~---~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 160 (281)
...... .....|.++...+++.+.+....+| +..++..... ...+.....-....|.++...+++...++
T Consensus 483 ~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~------~~~~~~~~~l~~~~i~~i~~d~~g~lWi~ 555 (781)
T 3v9f_A 483 HHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQL------VRKFNQYEGFCSNTINQIYRSSKGQMWLA 555 (781)
T ss_dssp EEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCE------EEEECTTTTCSCSCEEEEEECTTSCEEEE
T ss_pred ecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCe------EEEccCCCCCCCCeeEEEEECCCCCEEEE
Confidence 111111 0134688888888877655543344 5556543321 11121111112356888888888875554
Q ss_pred eeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecCCCCcEEEEec
Q 023500 161 CSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVE 225 (281)
Q Consensus 161 ~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~~~~~~~ 225 (281)
+.+|.+..||.+..... ......+.....+.++..+++|.+-.++.+| +..++.
T Consensus 556 -T~~Glv~~~d~~~~~~~---------~~~~~~gl~~~~i~~i~~d~~g~lW~~t~~G-l~~~~~ 609 (781)
T 3v9f_A 556 -TGEGLVCFPSARNFDYQ---------VFQRKEGLPNTHIRAISEDKNGNIWASTNTG-ISCYIT 609 (781)
T ss_dssp -ETTEEEEESCTTTCCCE---------EECGGGTCSCCCCCEEEECSSSCEEEECSSC-EEEEET
T ss_pred -ECCCceEEECCCCCcEE---------EccccCCCCCceEEEEEECCCCCEEEEcCCc-eEEEEC
Confidence 44665477776432211 0000111223456677777777766666666 444433
No 256
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.41 E-value=0.027 Score=43.63 Aligned_cols=226 Identities=11% Similarity=0.001 Sum_probs=122.1
Q ss_pred CEEEEeeCCCcEEEEecCCCceee---eeeecCCCCCeeEEEEcCCCCE-EEEecCCCcEEEEEecCCCeeEEeEeecCC
Q 023500 16 KLLATASFDATTCIWEDVGGDYEC---VATLEGHENEVKSVSWNASGTL-LATCGRDKSVWIWEVMPGNEFECVSVLQGH 91 (281)
Q Consensus 16 ~~l~tg~~d~~i~lw~~~~~~~~~---~~~~~~h~~~v~~v~~~~~~~~-l~s~~~d~~v~~w~~~~~~~~~~~~~~~~~ 91 (281)
++|..+.. +.|..++..+..... ...+.........++|+|++.. +++-..++.|..+++..... .......
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~---~~~~~~~ 77 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP---TTIIRQD 77 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC---EEEECTT
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc---EEEEECC
Confidence 34444443 467777765543210 0111112245678999996554 55656678999998754322 1122222
Q ss_pred ccceeEEEecCCCC-eEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeC---CCcE
Q 023500 92 AQDVKMVQWHPTMD-VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD---DLTI 167 (281)
Q Consensus 92 ~~~v~~v~~~p~~~-~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---d~~i 167 (281)
......+++.|++. ++++-...+.|.+++.+.... ..+.. .+ ...+..++++|++..|+.+.. .+.|
T Consensus 78 ~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~------~~~~~--~~-~~~P~~i~vd~~~g~lyv~~~~~~~~~I 148 (267)
T 1npe_A 78 LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR------RVLFD--TG-LVNPRGIVTDPVRGNLYWTDWNRDNPKI 148 (267)
T ss_dssp CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC------EEEEC--SS-CSSEEEEEEETTTTEEEEEECCSSSCEE
T ss_pred CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE------EEEEE--CC-CCCccEEEEeeCCCEEEEEECCCCCcEE
Confidence 24568899999755 555656677898887753211 11111 01 134678999997665555443 3577
Q ss_pred EEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCC-c-eeeecCCCCcEEEEecccCCCcCCccceeeeeeccC
Q 023500 168 KIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE-G-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKA 245 (281)
Q Consensus 168 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (281)
..++.+.... +.+ ....-.....++++++ + ++++-...+.+..++..... ...... .
T Consensus 149 ~~~~~dg~~~---------~~~---~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~------~~~~~~---~ 207 (267)
T 1npe_A 149 ETSHMDGTNR---------RIL---AQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG------RRKVLE---G 207 (267)
T ss_dssp EEEETTSCCC---------EEE---ECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE------EEEEEE---C
T ss_pred EEEecCCCCc---------EEE---EECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCc------eEEEec---C
Confidence 7776543211 000 0011123456777764 3 45666666778877654211 111111 1
Q ss_pred CCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEcc
Q 023500 246 HDMDVNSVQWSPGERRLLASASDDGMIKIWELA 278 (281)
Q Consensus 246 h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~ 278 (281)
......++.. +..++++....+.|..++..
T Consensus 208 -~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 208 -LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp -CCSEEEEEEE--TTEEEEEETTTTEEEEEETT
T ss_pred -CCCceEEEEe--CCEEEEEECCCCeEEEEeCC
Confidence 1224566654 45677777777889888865
No 257
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.31 E-value=0.00073 Score=58.37 Aligned_cols=113 Identities=15% Similarity=0.093 Sum_probs=66.1
Q ss_pred CeeEEEEcCCCCEEE-EecCCCcEEEEEecCCCe---------eEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEE
Q 023500 49 EVKSVSWNASGTLLA-TCGRDKSVWIWEVMPGNE---------FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKV 118 (281)
Q Consensus 49 ~v~~v~~~~~~~~l~-s~~~d~~v~~w~~~~~~~---------~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~ 118 (281)
.-.++.++|||++++ ++..+.+|.++|+..... ........ -...-.-++|+|++..+.+.--|++|.+
T Consensus 278 ~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~~dG~aY~t~~ldsqV~k 356 (595)
T 1fwx_A 278 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDGRGNAYTSLFLDSQVVK 356 (595)
T ss_dssp SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEECTTSEEEEEETTTTEEEE
T ss_pred CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEEECCCCeEEEEEecCCcEEE
Confidence 346889999999754 556789999999873310 00111111 1234578899999965667778999999
Q ss_pred EeCCCCC-----CCCceeeeeeeecc-CCccccEEEEEEccCCCEEEEee
Q 023500 119 WWAEDTD-----SDNWHCVQTISESN-NGHSSTIWALSFNAKGDKLVSCS 162 (281)
Q Consensus 119 w~~~~~~-----~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~ 162 (281)
|+++... ......+.++.... .+|......+.++|||++|++..
T Consensus 357 wdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~N 406 (595)
T 1fwx_A 357 WNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLS 406 (595)
T ss_dssp EEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEE
T ss_pred EEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcC
Confidence 9876510 01112233332211 12221112234578999888864
No 258
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.26 E-value=0.056 Score=44.05 Aligned_cols=229 Identities=10% Similarity=0.065 Sum_probs=111.0
Q ss_pred CCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEEeEeecCCcc
Q 023500 14 SGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQ 93 (281)
Q Consensus 14 ~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~~~~~~ 93 (281)
++..+..++.++.|..+|..+++......+.+ ........ .+..++.++.++.|..+|..+++....... .....
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~--~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~-~~~~~ 176 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAG--EALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNL-DMPSL 176 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSS--CCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEEC-CC---
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCC--ceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeC-CCCce
Confidence 35566678889999999988776543333221 11111111 245777788889999999877754322111 10000
Q ss_pred ---ceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCcc--ccEEEEEEcc--CCCEEEEeeCCCc
Q 023500 94 ---DVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHS--STIWALSFNA--KGDKLVSCSDDLT 166 (281)
Q Consensus 94 ---~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~--~~v~~~~~~~--~~~~l~s~~~d~~ 166 (281)
....... .+..++.++.++.+..++..+... .|+. ..... .+.. ..+..+.-.| .+..++.++.++.
T Consensus 177 ~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~-~w~~--~~~~~-~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~ 250 (376)
T 3q7m_A 177 SLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQGQM-IWQQ--RISQA-TGSTEIDRLSDVDTTPVVVNGVVFALAYNGN 250 (376)
T ss_dssp --CCCCCCEE--ETTEEEECCTTTEEEEEETTTCCE-EEEE--ECCC------------CCCCCCEEETTEEEEECTTSC
T ss_pred eecCCCCcEE--ECCEEEEEcCCCEEEEEECCCCcE-EEEE--ecccC-CCCcccccccccCCCcEEECCEEEEEecCcE
Confidence 0011111 145677788899999998765421 1111 00000 0000 0000000011 2456777788889
Q ss_pred EEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecCCCCcEEEEecccCCCcCCccceeeeeeccCC
Q 023500 167 IKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAH 246 (281)
Q Consensus 167 i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 246 (281)
+..+|.+.++.. |+.. ......+.. .++.+..+..++.+..++...+. .........
T Consensus 251 l~~~d~~tG~~~-------w~~~-------~~~~~~~~~-~~~~l~~~~~~g~l~~~d~~tG~--------~~w~~~~~~ 307 (376)
T 3q7m_A 251 LTALDLRSGQIM-------WKRE-------LGSVNDFIV-DGNRIYLVDQNDRVMALTIDGGV--------TLWTQSDLL 307 (376)
T ss_dssp EEEEETTTCCEE-------EEEC-------CCCEEEEEE-ETTEEEEEETTCCEEEEETTTCC--------EEEEECTTT
T ss_pred EEEEECCCCcEE-------eecc-------CCCCCCceE-ECCEEEEEcCCCeEEEEECCCCc--------EEEeecccC
Confidence 999987654322 1100 011112222 24555556667778877654321 111111111
Q ss_pred CCCeeEEEEcCCCCeeEEEeCCCCeEEEEEccc
Q 023500 247 DMDVNSVQWSPGERRLLASASDDGMIKIWELAN 279 (281)
Q Consensus 247 ~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~~ 279 (281)
...+...... +.. +..++.+|.|..+|..+
T Consensus 308 ~~~~~~~~~~--~~~-l~v~~~~g~l~~~d~~t 337 (376)
T 3q7m_A 308 HRLLTSPVLY--NGN-LVVGDSEGYLHWINVED 337 (376)
T ss_dssp TSCCCCCEEE--TTE-EEEECTTSEEEEEETTT
T ss_pred CCcccCCEEE--CCE-EEEEeCCCeEEEEECCC
Confidence 1112222222 233 44677788898888654
No 259
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.21 E-value=0.12 Score=46.91 Aligned_cols=244 Identities=13% Similarity=0.093 Sum_probs=133.2
Q ss_pred cceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeec------CCCCCeeEEEEcCCCCEEEEecCCCcEEEEEec
Q 023500 4 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLE------GHENEVKSVSWNASGTLLATCGRDKSVWIWEVM 77 (281)
Q Consensus 4 ~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~------~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~ 77 (281)
..|.++...++|.+.+ |..++-|..|+..++.+.....-. -....|.++...++|+.|..|..++-|..++..
T Consensus 357 ~~V~~i~~d~~g~lWi-Gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~ 435 (795)
T 4a2l_A 357 NVVSCIVEDKDKNLWI-GTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRN 435 (795)
T ss_dssp SSEEEEEECTTSCEEE-EESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETT
T ss_pred CeeEEEEECCCCCEEE-EECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCC
Confidence 4688999999888764 677777889987766553322110 123578899888888845555555668888875
Q ss_pred CCCeeEEeEeec--CCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeec---cCCccccEEEEEEc
Q 023500 78 PGNEFECVSVLQ--GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISES---NNGHSSTIWALSFN 152 (281)
Q Consensus 78 ~~~~~~~~~~~~--~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~---~~~h~~~v~~~~~~ 152 (281)
.+.. ....... .....|.++...+++.+.+.+ . +-+.+|+..... + ..+... ..-....|.++...
T Consensus 436 ~~~~-~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~---~---~~~~~~~~~~~~~~~~i~~i~~d 506 (795)
T 4a2l_A 436 SGQV-ENFNQRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRS---F---TTIEKEKDGTPVVSKQITTLFRD 506 (795)
T ss_dssp TCCE-EEECTTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTE---E---EECCBCTTCCBCCCCCEEEEEEC
T ss_pred CCcE-EEeecCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCe---E---EEccccccccccCCceEEEEEEC
Confidence 4431 1111000 123568888888877766554 3 457777654321 1 111110 01123568889888
Q ss_pred cCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecCCCCcEEEEecccCCCcC
Q 023500 153 AKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLID 232 (281)
Q Consensus 153 ~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 232 (281)
+++...+... .| +..|+.+......... . .........+.++..+++|.+-.++.+| +..|+....
T Consensus 507 ~~g~lWigt~-~G-l~~~~~~~~~~~~~~~-~------~~~~l~~~~i~~i~~d~~g~lWigT~~G-l~~~d~~~~---- 572 (795)
T 4a2l_A 507 SHKRLWIGGE-EG-LSVFKQEGLDIQKASI-L------PVSNVTKLFTNCIYEASNGIIWVGTREG-FYCFNEKDK---- 572 (795)
T ss_dssp TTCCEEEEES-SC-EEEEEEETTEEEECCC-S------CSCGGGGSCEEEEEECTTSCEEEEESSC-EEEEETTTT----
T ss_pred CCCCEEEEeC-Cc-eEEEeCCCCeEEEecC-C------CCCCCCCCeeEEEEECCCCCEEEEeCCC-ceeECCCCC----
Confidence 8887665444 55 7777754322100000 0 0011234567888888887665555554 555544321
Q ss_pred CccceeeeeeccC-CCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEc
Q 023500 233 GPSYKMLLKKEKA-HDMDVNSVQWSPGERRLLASASDDGMIKIWEL 277 (281)
Q Consensus 233 ~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~ 277 (281)
.... +....+ ....|.++...++|. +.+++ .. -|..|+.
T Consensus 573 --~~~~-~~~~~gl~~~~i~~i~~d~~g~-lWi~t-~~-Gl~~~~~ 612 (795)
T 4a2l_A 573 --QIKR-YNTTNGLPNNVVYGILEDSFGR-LWLST-NR-GISCFNP 612 (795)
T ss_dssp --EEEE-ECGGGTCSCSCEEEEEECTTSC-EEEEE-TT-EEEEEET
T ss_pred --cEEE-eCCCCCCchhheEEEEECCCCC-EEEEc-CC-ceEEEcC
Confidence 1111 111111 134578888887764 44333 33 4455554
No 260
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.21 E-value=0.07 Score=44.20 Aligned_cols=118 Identities=20% Similarity=0.251 Sum_probs=76.5
Q ss_pred CeeEEEEcCCCCEEEEecCCCcEEEEEecCCC---e-------eEEeEeec------CCccceeEEEecCCC---CeEEE
Q 023500 49 EVKSVSWNASGTLLATCGRDKSVWIWEVMPGN---E-------FECVSVLQ------GHAQDVKMVQWHPTM---DVLFS 109 (281)
Q Consensus 49 ~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~---~-------~~~~~~~~------~~~~~v~~v~~~p~~---~~l~s 109 (281)
.|..+..||+|++||..+. .+|.|-.+..+. . .++ +.+. .....|..+.|||-+ ..|++
T Consensus 67 ~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~-~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVV 144 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQI-FHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVV 144 (452)
T ss_dssp TTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEE-EEEEGGGCC--CCCCEEEEEECTTBGGGCEEEE
T ss_pred ceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccce-eEEEcCCcccCCCCceeEEEeccccCCCCeEEE
Confidence 6788999999999998865 688888886321 0 111 1111 124679999999964 47888
Q ss_pred EecCCeEEEEeCCCCCCCCceeeeeee--eccCCccccEEEEEEccCCCEEEEee--CCCcEEE
Q 023500 110 CSYDNTIKVWWAEDTDSDNWHCVQTIS--ESNNGHSSTIWALSFNAKGDKLVSCS--DDLTIKI 169 (281)
Q Consensus 110 ~s~d~~v~~w~~~~~~~~~~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~~--~d~~i~~ 169 (281)
-..|++|++|++......+. .+.+.. .........|.+++|.+++-.|...+ +.|.|.-
T Consensus 145 LtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 145 LKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp EETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred EecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 89999999999986432222 110000 01122336688999999876666644 7777653
No 261
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.21 E-value=0.078 Score=46.99 Aligned_cols=114 Identities=8% Similarity=0.064 Sum_probs=69.1
Q ss_pred EEEEcC-CCCEEEEecCCC-----------cEEEEEecCCCeeEEeEee-cCCccceeEEEecCCCCeEEEEec-CCeEE
Q 023500 52 SVSWNA-SGTLLATCGRDK-----------SVWIWEVMPGNEFECVSVL-QGHAQDVKMVQWHPTMDVLFSCSY-DNTIK 117 (281)
Q Consensus 52 ~v~~~~-~~~~l~s~~~d~-----------~v~~w~~~~~~~~~~~~~~-~~~~~~v~~v~~~p~~~~l~s~s~-d~~v~ 117 (281)
.+++.| +++.++.||.+. .+.+||..... +..+... ..+.....++++.+++.+++.|+. +..+.
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~-w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGI-VSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS 268 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCC-BCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCc-EEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceE
Confidence 566777 888888887643 57788876543 2222222 223333445677889999999884 45889
Q ss_pred EEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEee-CC-----CcEEEEeCCc
Q 023500 118 VWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS-DD-----LTIKIWGADI 174 (281)
Q Consensus 118 ~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~d-----~~i~~w~~~~ 174 (281)
+||.... .|..+..+.. .+. -.++...++++.++.|+ .+ ..+.+||...
T Consensus 269 ~yd~~t~---~W~~~~~~~~----~R~-~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 269 LYDSSSD---SWIPGPDMQV----ARG-YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp EEEGGGT---EEEECCCCSS----CCS-SCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred EecCcCC---ceeECCCCCc----ccc-ccceEEecCCeEEEEeCcccCCcccccceEeCCCC
Confidence 9987643 3443332221 111 12445557888888888 34 4688888764
No 262
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.16 E-value=0.12 Score=45.95 Aligned_cols=155 Identities=11% Similarity=0.115 Sum_probs=84.0
Q ss_pred CCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcC--CCCEEEEecC------CCcEEEEEecCCCeeEEeE
Q 023500 15 GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGR------DKSVWIWEVMPGNEFECVS 86 (281)
Q Consensus 15 ~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~--~~~~l~s~~~------d~~v~~w~~~~~~~~~~~~ 86 (281)
+..++.++.|+.|..+|..+++............ ...+.-+| .+..++.+.. ++.|..+|..+++......
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~-~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAK-PYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTS-SCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCC-cceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 4566778889999999988886543333221110 01111112 1334444432 5889999988776533322
Q ss_pred eecCC----------------------------ccceeEEEecCCCCeEEEEecCCe-------------------EEEE
Q 023500 87 VLQGH----------------------------AQDVKMVQWHPTMDVLFSCSYDNT-------------------IKVW 119 (281)
Q Consensus 87 ~~~~~----------------------------~~~v~~v~~~p~~~~l~s~s~d~~-------------------v~~w 119 (281)
...+. ......+.+.|...+++.++.++. |..+
T Consensus 196 ~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al 275 (668)
T 1kv9_A 196 TVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI 275 (668)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred ccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 11110 011124677888888888777653 7777
Q ss_pred eCCCCCCCCceeeeeeeeccCCcc-------ccEEEEEEccCCC---EEEEeeCCCcEEEEeCCcccc
Q 023500 120 WAEDTDSDNWHCVQTISESNNGHS-------STIWALSFNAKGD---KLVSCSDDLTIKIWGADITRM 177 (281)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~h~-------~~v~~~~~~~~~~---~l~s~~~d~~i~~w~~~~~~~ 177 (281)
|..+.. ..|+ .+. ..|. .++....+..+++ .++.++.+|.+.++|.+.++.
T Consensus 276 D~~tG~-~~W~----~~~--~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 276 RPDTGK-LAWH----YQV--TPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp CTTTCC-EEEE----EES--STTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred cCCCCc-eeeE----eec--CCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCE
Confidence 665542 1121 110 0111 2222233334554 688899999999999876553
No 263
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.05 E-value=0.069 Score=41.19 Aligned_cols=216 Identities=10% Similarity=0.137 Sum_probs=112.7
Q ss_pred eecCCCCCeeEEEEcCCCCEEEE-ecCCCcEEEEEecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEe
Q 023500 42 TLEGHENEVKSVSWNASGTLLAT-CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWW 120 (281)
Q Consensus 42 ~~~~h~~~v~~v~~~~~~~~l~s-~~~d~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~ 120 (281)
.+.+-.+.+..++|+|++..|++ ...++.|...|.. ++... ...+.+ ......+++.+++.++++.-.++.+.+++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~-~i~l~g-~~D~EGIa~~~~g~~~vs~E~~~~l~~~~ 97 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIR-TIPLDF-VKDLETIEYIGDNQFVISDERDYAIYVIS 97 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEE-EEECSS-CSSEEEEEECSTTEEEEEETTTTEEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEE-EEecCC-CCChHHeEEeCCCEEEEEECCCCcEEEEE
Confidence 45555578999999998765554 5567777777765 43221 122232 24577888888887766655667888887
Q ss_pred CCCCCCCCceeeeeeeec--cCCccccEEEEEEccCCCEEEEeeCCCcEEEEeCCccccccCCCCcccceeEE--e-ecc
Q 023500 121 AEDTDSDNWHCVQTISES--NNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCT--I-SGY 195 (281)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~--~-~~~ 195 (281)
+..... ...+...... ....+...-.++|+|.+..|.++.......+|..+. ...... ...... + ...
T Consensus 98 v~~~~~--i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g--~~~~~~---l~i~~~~~~~~~~ 170 (255)
T 3qqz_A 98 LTPNSE--VKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNG--LLSSNE---LHISKDKALQRQF 170 (255)
T ss_dssp ECTTCC--EEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEES--TTCSSC---CEEEECHHHHHTC
T ss_pred cCCCCe--eeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcc--cccCCc---eeeecchhhcccc
Confidence 754321 0111111111 112344567899999987666666554556664431 000000 000000 0 000
Q ss_pred cCcceEEEEeCCC--ceeeecCCCCcEEEEecccCCCcCCccceeeeeeccC-C-----CCCeeEEEEcCCCCeeEEEeC
Q 023500 196 HDRTIFSVHWSRE--GIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKA-H-----DMDVNSVQWSPGERRLLASAS 267 (281)
Q Consensus 196 ~~~~v~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h-----~~~v~~~~~~~~~~~~~~s~~ 267 (281)
.-..+..+.++|. .+++.....+.+..++.... + ...+.-..+ | -.....|+|.++|. ++++ +
T Consensus 171 ~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-~------~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIv-s 241 (255)
T 3qqz_A 171 TLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE-V------IGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIV-S 241 (255)
T ss_dssp CSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC-E------EEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEE-E
T ss_pred ccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-E------EEEEEcCCccCCcccccCCCCeeEECCCCC-EEEE-c
Confidence 1123345666653 35555556666666654431 1 111111111 0 12457899999874 6655 4
Q ss_pred CCCeEEEEE
Q 023500 268 DDGMIKIWE 276 (281)
Q Consensus 268 ~Dg~v~iw~ 276 (281)
+.+.+..+.
T Consensus 242 E~n~~y~f~ 250 (255)
T 3qqz_A 242 EPNRFYRFT 250 (255)
T ss_dssp TTTEEEEEE
T ss_pred CCceEEEEE
Confidence 455555544
No 264
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.03 E-value=0.11 Score=43.41 Aligned_cols=156 Identities=10% Similarity=0.088 Sum_probs=85.5
Q ss_pred eeEEEEcCC---CCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCC--cEEEEEecCCC
Q 023500 6 VRSCAWSPS---GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDK--SVWIWEVMPGN 80 (281)
Q Consensus 6 i~~~~~~~~---~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~--~v~~w~~~~~~ 80 (281)
-..++|+|+ |.++++-.. +.|+.++..++... .+.+.......++|+++|+++++..... .-.+..+....
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~---~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVD---IKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEE---EECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGG
T ss_pred CceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEE---EeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCC
Confidence 457899985 565554333 88988888666533 3333344578999999999555543221 11122221111
Q ss_pred eeEEeEeecCCccceeEEEecC-CCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEE
Q 023500 81 EFECVSVLQGHAQDVKMVQWHP-TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV 159 (281)
Q Consensus 81 ~~~~~~~~~~~~~~v~~v~~~p-~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 159 (281)
.......+. .-.....++++| ++.++++-..++.|+.++..... ....+... +.......++|+|+++.|+
T Consensus 217 ~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~-----~~~~~~~~--~~~~~~~~ia~dpdG~~LY 288 (433)
T 4hw6_A 217 GFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGT-----LTEEEVMM--DTKGSNFHIVWHPTGDWAY 288 (433)
T ss_dssp TTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCC-----EEEEEEEC--SCCSSCEEEEECTTSSEEE
T ss_pred Ceecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCe-----EEEEEecc--CCCCCcccEEEeCCCCEEE
Confidence 110001111 122346788899 66667676677888888665321 10111111 1112234699999998554
Q ss_pred E-eeCCCcEEEEeCC
Q 023500 160 S-CSDDLTIKIWGAD 173 (281)
Q Consensus 160 s-~~~d~~i~~w~~~ 173 (281)
. -...+.|..++.+
T Consensus 289 vad~~~~~I~~~~~d 303 (433)
T 4hw6_A 289 IIYNGKHCIYRVDYN 303 (433)
T ss_dssp EEETTTTEEEEEEBC
T ss_pred EEeCCCCEEEEEeCC
Confidence 4 4456788887654
No 265
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.99 E-value=0.12 Score=43.53 Aligned_cols=108 Identities=7% Similarity=0.099 Sum_probs=61.9
Q ss_pred ceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecC------CCCCeeEEEEcCC---CCE-EEEecC-------
Q 023500 5 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEG------HENEVKSVSWNAS---GTL-LATCGR------- 67 (281)
Q Consensus 5 ~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~------h~~~v~~v~~~~~---~~~-l~s~~~------- 67 (281)
.-+.++|.|+|+++++-...+.|.+++..++....+..+.. ..+....|+|+|+ +.. .++-+.
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 35689999999988875544568888765444433433321 2456779999995 444 444332
Q ss_pred -----CCcEEEEEecCCC-e---eEEe-Eeec-CCccceeEEEecCCCCeEEEEec
Q 023500 68 -----DKSVWIWEVMPGN-E---FECV-SVLQ-GHAQDVKMVQWHPTMDVLFSCSY 112 (281)
Q Consensus 68 -----d~~v~~w~~~~~~-~---~~~~-~~~~-~~~~~v~~v~~~p~~~~l~s~s~ 112 (281)
...|.-++..... . .+.+ ..+. ........+.|.|++.++++.+.
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 1234444443221 1 1111 1121 11234688999999998777654
No 266
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.96 E-value=0.084 Score=40.81 Aligned_cols=139 Identities=9% Similarity=-0.014 Sum_probs=79.4
Q ss_pred cCCC-CEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEEeEeecC
Q 023500 12 SPSG-KLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQG 90 (281)
Q Consensus 12 ~~~~-~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~~~ 90 (281)
.+++ ++.+....++.+.+||..+.+. +.++.- ...=+.++ +++..|+.+..++.|.++|....+....+.+...
T Consensus 102 t~~g~~Ly~ltw~~~~v~V~D~~Tl~~--~~ti~~-~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~ 176 (268)
T 3nok_A 102 ASDGERLYQLTWTEGLLFTWSGMPPQR--ERTTRY-SGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLR 176 (268)
T ss_dssp EECSSCEEEEESSSCEEEEEETTTTEE--EEEEEC-SSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEET
T ss_pred EEeCCEEEEEEccCCEEEEEECCcCcE--EEEEeC-CCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCC
Confidence 3344 4455556678999999877653 445442 22223444 5677777766788999999776654433333221
Q ss_pred C--ccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeec---------cCCccccEEEEEEccCCC-EE
Q 023500 91 H--AQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISES---------NNGHSSTIWALSFNAKGD-KL 158 (281)
Q Consensus 91 ~--~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~---------~~~h~~~v~~~~~~~~~~-~l 158 (281)
. -..++-+.|. ++.+++....++.|.+-|.++.. .+..+... ...-....+.++|+|+++ ++
T Consensus 177 g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~-----V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlf 250 (268)
T 3nok_A 177 GQPVELINELECA-NGVIYANIWHSSDVLEIDPATGT-----VVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIF 250 (268)
T ss_dssp TEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCB-----EEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEE
T ss_pred CcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCc-----EEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEE
Confidence 1 1134556665 56666666567888888776543 22222211 001123568999999765 45
Q ss_pred EEe
Q 023500 159 VSC 161 (281)
Q Consensus 159 ~s~ 161 (281)
+||
T Consensus 251 VTG 253 (268)
T 3nok_A 251 MTG 253 (268)
T ss_dssp EEE
T ss_pred EeC
Confidence 544
No 267
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.92 E-value=0.22 Score=45.01 Aligned_cols=245 Identities=10% Similarity=0.047 Sum_probs=128.7
Q ss_pred cceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeee-------cCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEe
Q 023500 4 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATL-------EGHENEVKSVSWNASGTLLATCGRDKSVWIWEV 76 (281)
Q Consensus 4 ~~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~-------~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~ 76 (281)
..|.++...++|.+- .|..++-|..++.....+...... .-....|.++...++|.+.+. ..++-|..++.
T Consensus 313 ~~v~~i~~D~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWig-t~~~Gl~~~~~ 390 (781)
T 3v9f_A 313 ASARYIFQDSFNNIW-IGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIG-TDGGGINVFEN 390 (781)
T ss_dssp SCEEEEEECSSCCEE-EEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEE-EBSSCEEEEET
T ss_pred CeEEEEEEeCCCCEE-EEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEE-eCCCcEEEEEC
Confidence 568899999988865 466667788888766554322110 012356889988887765443 33344777775
Q ss_pred cCCCeeEEeE-eecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCC
Q 023500 77 MPGNEFECVS-VLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG 155 (281)
Q Consensus 77 ~~~~~~~~~~-~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 155 (281)
.... ..... ........|.++...+++.+.+ |+.++-+..++..... ...+... ......|.++...+++
T Consensus 391 ~~~~-~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~------~~~~~~~-~~~~~~v~~i~~d~~g 461 (781)
T 3v9f_A 391 GKRV-AIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKK------FQIIELE-KNELLDVRVFYEDKNK 461 (781)
T ss_dssp TEEE-EECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCE------EEECCST-TTCCCCEEEEEECTTS
T ss_pred CCCe-EEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCc------EEEeccC-CCCCCeEEEEEECCCC
Confidence 3211 11000 0011235678888777766554 5666677777554321 1111110 1123568888888777
Q ss_pred CEEEEeeCCCcEEEEeCCccccccCCCCcccceeEEee--cccCcceEEEEeCCCceeeecCCCCcEEEEecccCCCcCC
Q 023500 156 DKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTIS--GYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDG 233 (281)
Q Consensus 156 ~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 233 (281)
.+.+ |+..| +..|+.+..... ...... ......+.++..++++.+-.++.++-+..++....
T Consensus 462 ~lwi-gt~~G-l~~~~~~~~~~~---------~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~----- 525 (781)
T 3v9f_A 462 KIWI-GTHAG-VFVIDLASKKVI---------HHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQ----- 525 (781)
T ss_dssp EEEE-EETTE-EEEEESSSSSCC---------EEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCC-----
T ss_pred CEEE-EECCc-eEEEeCCCCeEE---------ecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCC-----
Confidence 5444 45544 777876533211 000000 01135677888888887666665434555644321
Q ss_pred ccceeeeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEEcc
Q 023500 234 PSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 278 (281)
Q Consensus 234 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~~~ 278 (281)
...............|.++...+++. +.++ +.+|.|..|+..
T Consensus 526 -~~~~~~~~~~l~~~~i~~i~~d~~g~-lWi~-T~~Glv~~~d~~ 567 (781)
T 3v9f_A 526 -LVRKFNQYEGFCSNTINQIYRSSKGQ-MWLA-TGEGLVCFPSAR 567 (781)
T ss_dssp -EEEEECTTTTCSCSCEEEEEECTTSC-EEEE-ETTEEEEESCTT
T ss_pred -eEEEccCCCCCCCCeeEEEEECCCCC-EEEE-ECCCceEEECCC
Confidence 11111101111234688888887765 4433 335654666643
No 268
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.90 E-value=0.13 Score=41.88 Aligned_cols=149 Identities=9% Similarity=0.049 Sum_probs=80.7
Q ss_pred CCEEEEeeCCCcEEEEecCCCceeeeeeecCC-------CCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEEeEe
Q 023500 15 GKLLATASFDATTCIWEDVGGDYECVATLEGH-------ENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSV 87 (281)
Q Consensus 15 ~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h-------~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~ 87 (281)
+..+..++.++.|..+|..+++......+... ...+.+ ....++..++.++.++.|..+|..+++......
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~- 130 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTK- 130 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTTCCEEEEEE-
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCCCCEEEEEe-
Confidence 45666778888999999887765433333211 122222 122246677888889999999987776432221
Q ss_pred ecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeee-ccCCccccEEEEEEccCCCEEEEeeCCCc
Q 023500 88 LQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISE-SNNGHSSTIWALSFNAKGDKLVSCSDDLT 166 (281)
Q Consensus 88 ~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~~~d~~ 166 (281)
.. ......... .+..++.++.++.+..++..+... .|+....... .......+ .. .+..++.+..++.
T Consensus 131 ~~--~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~-~W~~~~~~~~~~~~~~~~~----~~--~~~~v~~g~~~g~ 199 (376)
T 3q7m_A 131 VA--GEALSRPVV--SDGLVLIHTSNGQLQALNEADGAV-KWTVNLDMPSLSLRGESAP----TT--AFGAAVVGGDNGR 199 (376)
T ss_dssp CS--SCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCE-EEEEECCC-----CCCCCC----EE--ETTEEEECCTTTE
T ss_pred CC--CceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcE-EEEEeCCCCceeecCCCCc----EE--ECCEEEEEcCCCE
Confidence 11 111111111 145777788899999998765421 1111000000 00000111 11 1346778888999
Q ss_pred EEEEeCCccc
Q 023500 167 IKIWGADITR 176 (281)
Q Consensus 167 i~~w~~~~~~ 176 (281)
+..+|.+.++
T Consensus 200 l~~~d~~tG~ 209 (376)
T 3q7m_A 200 VSAVLMEQGQ 209 (376)
T ss_dssp EEEEETTTCC
T ss_pred EEEEECCCCc
Confidence 9999876443
No 269
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.85 E-value=0.043 Score=45.45 Aligned_cols=114 Identities=14% Similarity=0.162 Sum_probs=74.8
Q ss_pred ceeEEEEcCCCCEEEEeeCCCcEEEEecCCCc---e-------eeeeeec--C----CCCCeeEEEEcCC---CCEEEEe
Q 023500 5 TVRSCAWSPSGKLLATASFDATTCIWEDVGGD---Y-------ECVATLE--G----HENEVKSVSWNAS---GTLLATC 65 (281)
Q Consensus 5 ~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~---~-------~~~~~~~--~----h~~~v~~v~~~~~---~~~l~s~ 65 (281)
.|..+..+|+|++||..+ +..|.|-+...+. . ...+++. . ...+|..+.|+|- +..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 577899999999999875 5567776644211 0 0111221 1 2467999999995 4678888
Q ss_pred cCCCcEEEEEecCCCe-eEEe------EeecCCccceeEEEecCCCCeEEEEe--cCCeEEEE
Q 023500 66 GRDKSVWIWEVMPGNE-FECV------SVLQGHAQDVKMVQWHPTMDVLFSCS--YDNTIKVW 119 (281)
Q Consensus 66 ~~d~~v~~w~~~~~~~-~~~~------~~~~~~~~~v~~v~~~p~~~~l~s~s--~d~~v~~w 119 (281)
-.|+.|++||+..... .... .........|.+++|.+++-.|...+ ..|.|+-.
T Consensus 146 tsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred ecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 8999999999975321 1101 11122336788999999877666645 78888644
No 270
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.85 E-value=0.11 Score=43.50 Aligned_cols=158 Identities=13% Similarity=0.212 Sum_probs=88.3
Q ss_pred eEEEEcC-CCCEEEEeeCCCcEEEEecCCCce-eeeeeecCCCCCeeEEEEcCCCCE-EEEecCCCcEEEEEecCC-Cee
Q 023500 7 RSCAWSP-SGKLLATASFDATTCIWEDVGGDY-ECVATLEGHENEVKSVSWNASGTL-LATCGRDKSVWIWEVMPG-NEF 82 (281)
Q Consensus 7 ~~~~~~~-~~~~l~tg~~d~~i~lw~~~~~~~-~~~~~~~~h~~~v~~v~~~~~~~~-l~s~~~d~~v~~w~~~~~-~~~ 82 (281)
..++++| +|.++++-..++.|..++..++.. ..+.... ....-..++|+|+|++ .++-...+.|+.++.... ...
T Consensus 231 ~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~-~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~ 309 (433)
T 4hw6_A 231 KTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMD-TKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKL 309 (433)
T ss_dssp CCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECS-CCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCB
T ss_pred CEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccC-CCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCccc
Confidence 4578899 777777666677888888765543 2222221 1222346999999984 555566788888876421 111
Q ss_pred EEeEeecC---------------CccceeEEEe---------cCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeec
Q 023500 83 ECVSVLQG---------------HAQDVKMVQW---------HPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISES 138 (281)
Q Consensus 83 ~~~~~~~~---------------~~~~v~~v~~---------~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~ 138 (281)
.....+.+ .-..-..+++ .++++++++-...+.|+.++.+. .+.++.-.
T Consensus 310 ~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~G-------~v~t~~G~ 382 (433)
T 4hw6_A 310 AVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPEG-------RVTTYAGR 382 (433)
T ss_dssp CCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTTS-------EEEEEECC
T ss_pred CcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCCC-------CEEEEEeC
Confidence 00011111 0112346778 67777778877778888875321 11111100
Q ss_pred --------------cCCccccEEEEEEc-cCCCEEEEeeCCCcEEEEeC
Q 023500 139 --------------NNGHSSTIWALSFN-AKGDKLVSCSDDLTIKIWGA 172 (281)
Q Consensus 139 --------------~~~h~~~v~~~~~~-~~~~~l~s~~~d~~i~~w~~ 172 (281)
..+.-..+..++++ +++.++++-.....|+.++.
T Consensus 383 g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 383 GNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp CTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred CCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 00112346789998 56655555555667776643
No 271
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.81 E-value=0.15 Score=41.37 Aligned_cols=103 Identities=11% Similarity=0.086 Sum_probs=60.4
Q ss_pred eeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeec---CCCCCeeEEEEcCC---CCEE-EEecCC-----CcEEE
Q 023500 6 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLE---GHENEVKSVSWNAS---GTLL-ATCGRD-----KSVWI 73 (281)
Q Consensus 6 i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~---~h~~~v~~v~~~~~---~~~l-~s~~~d-----~~v~~ 73 (281)
-+.++|.|+|+++++ ..++.|.+++ .++...+..+. .-......++|+|+ +..| ++-..+ ..|..
T Consensus 33 P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r 109 (352)
T 2ism_A 33 PWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVR 109 (352)
T ss_dssp EEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEE
T ss_pred ceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEE
Confidence 467899999997766 4568898887 33333333221 12346789999998 4444 443322 56666
Q ss_pred EEecCCC--eeEE-eEeec---CCccceeEEEecCCCCeEEEEe
Q 023500 74 WEVMPGN--EFEC-VSVLQ---GHAQDVKMVQWHPTMDVLFSCS 111 (281)
Q Consensus 74 w~~~~~~--~~~~-~~~~~---~~~~~v~~v~~~p~~~~l~s~s 111 (281)
++..... ..+. ...+. +.......+.|.|++.++++.+
T Consensus 110 ~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 110 LRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 7765321 1111 11122 1112346899999998777754
No 272
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.78 E-value=0.1 Score=42.41 Aligned_cols=104 Identities=11% Similarity=0.083 Sum_probs=59.6
Q ss_pred ceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeec---CCCCCeeEEEEcCC---CCE-EEEecC---C----Cc
Q 023500 5 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLE---GHENEVKSVSWNAS---GTL-LATCGR---D----KS 70 (281)
Q Consensus 5 ~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~---~h~~~v~~v~~~~~---~~~-l~s~~~---d----~~ 70 (281)
.-+.++|.|+|+++++ ..++.|.+++. ++. ..+..+. .-......|+|+|+ +.. .++-.. + ..
T Consensus 30 ~P~~ia~~pdG~l~V~-e~~g~I~~~d~-~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVT-ERPGRLVLISP-SGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp CEEEEEEEETTEEEEE-ETTTEEEEECS-SCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCeEEEEcCCCeEEEE-eCCCEEEEEeC-CCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 3467899999997766 45588888864 333 3333221 12345789999997 444 444332 3 45
Q ss_pred EEEEEecCCC-e---eEEe-Eeec-CCccceeEEEecCCCCeEEEEe
Q 023500 71 VWIWEVMPGN-E---FECV-SVLQ-GHAQDVKMVQWHPTMDVLFSCS 111 (281)
Q Consensus 71 v~~w~~~~~~-~---~~~~-~~~~-~~~~~v~~v~~~p~~~~l~s~s 111 (281)
|..++..... . .+.+ ..+. ........+.|.|++.++++.+
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 6666654321 1 1111 1121 1112346799999998877754
No 273
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.75 E-value=0.14 Score=40.39 Aligned_cols=157 Identities=13% Similarity=0.083 Sum_probs=86.7
Q ss_pred ceeEEEEcCCCCEEEEeeCCC--cEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCee
Q 023500 5 TVRSCAWSPSGKLLATASFDA--TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEF 82 (281)
Q Consensus 5 ~i~~~~~~~~~~~l~tg~~d~--~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~ 82 (281)
....++++++|+++++....+ .|..++..+++...+..+. .......++..+++..+++-..++.|..+|..... .
T Consensus 73 ~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~-~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~-~ 150 (306)
T 2p4o_A 73 KVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLP-DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPS-G 150 (306)
T ss_dssp EEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECT-TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTE-E
T ss_pred CceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCC-CccccCcccccCCCcEEEEECCCCeEEEEeCCCCc-E
Confidence 356789999999776654332 3555666666544333332 12223455555555556666567877777754221 1
Q ss_pred EEeE--------eecCCccceeEEEecCCCCe-EEEEecCCeEEEEeCCCC-CCCCceeeeeeeeccCCccccEEEEEEc
Q 023500 83 ECVS--------VLQGHAQDVKMVQWHPTMDV-LFSCSYDNTIKVWWAEDT-DSDNWHCVQTISESNNGHSSTIWALSFN 152 (281)
Q Consensus 83 ~~~~--------~~~~~~~~v~~v~~~p~~~~-l~s~s~d~~v~~w~~~~~-~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 152 (281)
.... .....-...+.+ +|++.. +++-+..+.|..+++... ..... ..+... .....++++
T Consensus 151 ~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~---~~~~~~-----~~P~gi~vd 220 (306)
T 2p4o_A 151 SIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEP---EIFVEQ-----TNIDDFAFD 220 (306)
T ss_dssp EEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCC---EEEEES-----CCCSSEEEB
T ss_pred eEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCcc---EEEecc-----CCCCCeEEC
Confidence 1100 000111223444 777764 556566789999987642 11111 111110 124458889
Q ss_pred cCCCEEEEeeCCCcEEEEeCC
Q 023500 153 AKGDKLVSCSDDLTIKIWGAD 173 (281)
Q Consensus 153 ~~~~~l~s~~~d~~i~~w~~~ 173 (281)
+++.++++....+.|..++.+
T Consensus 221 ~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 221 VEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp TTCCEEEECBTTCCEEEECTT
T ss_pred CCCCEEEEeCCCCeEEEECCC
Confidence 999887777777889998764
No 274
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.75 E-value=0.12 Score=39.45 Aligned_cols=135 Identities=10% Similarity=0.109 Sum_probs=75.8
Q ss_pred CEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEEeEeecCCc---
Q 023500 16 KLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHA--- 92 (281)
Q Consensus 16 ~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~~~~~--- 92 (281)
++++....++.+.+||..+.+ .+.++.. ...=+.++ +++..|+.+..+++|.++|....+....+.+.. +.
T Consensus 76 ~ly~ltw~~~~v~v~D~~tl~--~~~ti~~-~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~-~g~~~ 149 (243)
T 3mbr_X 76 RLIQLTWRNHEGFVYDLATLT--PRARFRY-PGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTA-GGRPL 149 (243)
T ss_dssp EEEEEESSSSEEEEEETTTTE--EEEEEEC-SSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEE-TTEEC
T ss_pred EEEEEEeeCCEEEEEECCcCc--EEEEEeC-CCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEcc-CCccc
Confidence 444555667889999987764 3445442 22223444 566666655568889999876655433333321 11
Q ss_pred cceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeec-----c----CCccccEEEEEEccCCCEEEEee
Q 023500 93 QDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISES-----N----NGHSSTIWALSFNAKGDKLVSCS 162 (281)
Q Consensus 93 ~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~-----~----~~h~~~v~~~~~~~~~~~l~s~~ 162 (281)
..++-+.|. ++.+++....+..|.+.|..+.. .+..+... . ..-....+.++++|+++.|+..+
T Consensus 150 ~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~-----V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 150 DNLNELEWV-NGELLANVWLTSRIARIDPASGK-----VVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp CCEEEEEEE-TTEEEEEETTTTEEEEECTTTCB-----EEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred ccceeeEEe-CCEEEEEECCCCeEEEEECCCCC-----EEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 233445554 55556565567788888776543 22222111 0 01123568999999776554443
No 275
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.47 E-value=0.1 Score=46.38 Aligned_cols=74 Identities=14% Similarity=0.191 Sum_probs=49.7
Q ss_pred EEEEcCCCCEEEEeeCCC-------------------cEEEEecCCCceeeeeeecCCC-------CCeeEEEEcCCCC-
Q 023500 8 SCAWSPSGKLLATASFDA-------------------TTCIWEDVGGDYECVATLEGHE-------NEVKSVSWNASGT- 60 (281)
Q Consensus 8 ~~~~~~~~~~l~tg~~d~-------------------~i~lw~~~~~~~~~~~~~~~h~-------~~v~~v~~~~~~~- 60 (281)
..+++|++.++..+..++ .|..+|..+++.........|. .+.....+..+|+
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~ 313 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKP 313 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcE
Confidence 467888888877777665 3888898888755444433343 2222333334665
Q ss_pred --EEEEecCCCcEEEEEecCCCe
Q 023500 61 --LLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 61 --~l~s~~~d~~v~~w~~~~~~~ 81 (281)
.++.++.+|.+.++|..+++.
T Consensus 314 ~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 314 RKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp EEEEEECCTTSEEEEEETTTCCE
T ss_pred EEEEEEECCCCEEEEEECCCCCE
Confidence 688899999999999877654
No 276
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.46 E-value=0.26 Score=39.82 Aligned_cols=107 Identities=13% Similarity=0.099 Sum_probs=63.5
Q ss_pred ceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeee----cCCCCCeeEEEEcCC----CCEEEEe--cCCCcEEEE
Q 023500 5 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATL----EGHENEVKSVSWNAS----GTLLATC--GRDKSVWIW 74 (281)
Q Consensus 5 ~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~----~~h~~~v~~v~~~~~----~~~l~s~--~~d~~v~~w 74 (281)
.-+.++|.|+|+++++--..|.|.+++..++....+..+ ....+....|+|+|+ +.+.++- ..++.|.-|
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~ 112 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRM 112 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEE
T ss_pred CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEE
Confidence 356889999999988766588899887655543333322 123456789999995 4444432 234444445
Q ss_pred EecCCC-------eeEEe-Eeec-CCccceeEEEecCCCCeEEEEe
Q 023500 75 EVMPGN-------EFECV-SVLQ-GHAQDVKMVQWHPTMDVLFSCS 111 (281)
Q Consensus 75 ~~~~~~-------~~~~~-~~~~-~~~~~v~~v~~~p~~~~l~s~s 111 (281)
.+.... ..+.+ ..+. ........+.|.|++.++++.+
T Consensus 113 ~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 113 LYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred EeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 544311 11111 1121 1222456799999998888765
No 277
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.35 E-value=0.24 Score=40.16 Aligned_cols=107 Identities=9% Similarity=0.050 Sum_probs=57.5
Q ss_pred ceeEEEEcCCCC-EEEEeeCCCcEEEEecCCCceeeeeee----cCCCCCeeEEEEcCC----CCEEEEecC-------C
Q 023500 5 TVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATL----EGHENEVKSVSWNAS----GTLLATCGR-------D 68 (281)
Q Consensus 5 ~i~~~~~~~~~~-~l~tg~~d~~i~lw~~~~~~~~~~~~~----~~h~~~v~~v~~~~~----~~~l~s~~~-------d 68 (281)
.-+.++|.|+|+ ++++ ...+.|.+++..+.....+..+ ....+....++|+|+ +.+.++-.. .
T Consensus 19 ~P~~i~~~pdG~~l~V~-e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLIT-LRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEE-ETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEE-eCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 346889999999 7755 5578888887532211111111 112345689999995 444444322 2
Q ss_pred CcEEEEEecCCC----eeEEe-Eeec---CCccceeEEEecCCCCeEEEEec
Q 023500 69 KSVWIWEVMPGN----EFECV-SVLQ---GHAQDVKMVQWHPTMDVLFSCSY 112 (281)
Q Consensus 69 ~~v~~w~~~~~~----~~~~~-~~~~---~~~~~v~~v~~~p~~~~l~s~s~ 112 (281)
..|..+++.... ..+.+ ..+. .....-..+.|.|++.++++.+.
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd 149 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGE 149 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECC
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECC
Confidence 245555554321 11111 1111 11122467999999977776543
No 278
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.31 E-value=0.22 Score=37.35 Aligned_cols=150 Identities=15% Similarity=0.167 Sum_probs=76.8
Q ss_pred ceeEEEEcCCCCEEEEeeCCCcEEEEecCCCcee----eeeee--cCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEecC
Q 023500 5 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYE----CVATL--EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMP 78 (281)
Q Consensus 5 ~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~----~~~~~--~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~ 78 (281)
.+..++|+|+|.+.+. .++.+.-.+..+.... .-..+ .+.+. ..++.|.|+|.+.++ .|+.|.-++-..
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 5678999999998887 4555433333221100 00111 12222 478899999998888 458775454211
Q ss_pred CCe--e--EEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccC
Q 023500 79 GNE--F--ECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK 154 (281)
Q Consensus 79 ~~~--~--~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 154 (281)
... + ....+-.+-=..+..|.+.|++.+.+.. |+.++-+.........|....+. .....-.....+.|.++
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~--~g~~g~~~yr~l~f~~~ 192 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATK--IGQGGWDTFKFLFFSSV 192 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEE--EESSSGGGEEEEEECTT
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccce--eccCCcceEEEEEECCC
Confidence 110 0 0011112222567999999999888776 77764332222222222110001 00011223344668888
Q ss_pred CCEEEEeeCCC
Q 023500 155 GDKLVSCSDDL 165 (281)
Q Consensus 155 ~~~l~s~~~d~ 165 (281)
+...+.- ++
T Consensus 193 G~l~~v~--~g 201 (236)
T 1tl2_A 193 GTLFGVQ--GG 201 (236)
T ss_dssp SCEEEEE--TT
T ss_pred CcEEEEe--CC
Confidence 7655544 66
No 279
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.24 E-value=0.42 Score=39.90 Aligned_cols=71 Identities=8% Similarity=0.056 Sum_probs=48.9
Q ss_pred eeEEEEcC-CCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCE-EEEecCCCcEEEEEec
Q 023500 6 VRSCAWSP-SGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL-LATCGRDKSVWIWEVM 77 (281)
Q Consensus 6 i~~~~~~~-~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~-l~s~~~d~~v~~w~~~ 77 (281)
...++++| +|.++++-...+.|..++..+.....+...... ..-..++|+|+|++ +++-...+.|..++..
T Consensus 228 p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~-~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 228 CNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDS-GWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSS-SCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCC-CcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 45678999 778777766778899998876543223332221 23468999999994 5566677888888865
No 280
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.08 E-value=0.57 Score=39.84 Aligned_cols=161 Identities=9% Similarity=0.065 Sum_probs=89.0
Q ss_pred eeEEEEcCC--CCEEEEeeCCCcEEEEecCCCceeeeeeecC-CCCCeeEEEE-------cCCCCEEEEecCCC-c----
Q 023500 6 VRSCAWSPS--GKLLATASFDATTCIWEDVGGDYECVATLEG-HENEVKSVSW-------NASGTLLATCGRDK-S---- 70 (281)
Q Consensus 6 i~~~~~~~~--~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~-h~~~v~~v~~-------~~~~~~l~s~~~d~-~---- 70 (281)
-..++|+|. ++++++-...+.|++.|..++....+..... .-.....++| +++|+.|+.+...+ .
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 457899983 4555555544678888877765433322211 1224688999 99998666554443 2
Q ss_pred --EEEEEecCCCee------EEeEeecCCccceeEEEecCC-CCeEEEEecCCeEEEEeCC-------CCCC-CC---ce
Q 023500 71 --VWIWEVMPGNEF------ECVSVLQGHAQDVKMVQWHPT-MDVLFSCSYDNTIKVWWAE-------DTDS-DN---WH 130 (281)
Q Consensus 71 --v~~w~~~~~~~~------~~~~~~~~~~~~v~~v~~~p~-~~~l~s~s~d~~v~~w~~~-------~~~~-~~---~~ 130 (281)
|.+.+-.....+ ..+..+ .....++.+|+ +.++++-..++.|..++++ .... .+ ..
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~----~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~ 296 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAY----KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNN 296 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEE----SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGC
T ss_pred ceEEEEecCCCCceeecccceeeccC----CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccc
Confidence 444442221121 112221 23567788995 5556677777889988875 2211 00 00
Q ss_pred --eeeeeeeccCCccccEEEEEEccCCCEEEEe-eCCCcEEEEeC
Q 023500 131 --CVQTISESNNGHSSTIWALSFNAKGDKLVSC-SDDLTIKIWGA 172 (281)
Q Consensus 131 --~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~d~~i~~w~~ 172 (281)
....+... +.......++|+|+++.|+.+ .....|+.++.
T Consensus 297 ~g~~~~l~~~--~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 297 PNTFKQLFTI--ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp TTTEEEEEEC--SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ccccceeEec--CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 00111111 122345789999999954444 45667777654
No 281
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.88 E-value=0.19 Score=44.99 Aligned_cols=155 Identities=8% Similarity=0.002 Sum_probs=81.6
Q ss_pred eeEEEEcCCCCEE-EEeeCCCcEEEEecCC----CceeeeeeecCCCCCeeEEEEcCC-CCEEEEecCCCcEEEEEecCC
Q 023500 6 VRSCAWSPSGKLL-ATASFDATTCIWEDVG----GDYECVATLEGHENEVKSVSWNAS-GTLLATCGRDKSVWIWEVMPG 79 (281)
Q Consensus 6 i~~~~~~~~~~~l-~tg~~d~~i~lw~~~~----~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~~~d~~v~~w~~~~~ 79 (281)
+..++|++.+..| ++-...+.|..++..+ ... ...+...-.....|++.+. ++++++-...+.|.+.++...
T Consensus 408 p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~--~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 408 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY--DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp CCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCC--CCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred eEEEccccccCeEEEEecCCCeEEEEecCCCCCCcce--EEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 4567888865544 4434456788877654 111 1111111123456788764 455566566788888886533
Q ss_pred CeeEEeEeecCCccceeEEEecCCCCeEEEEec-C-CeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCE
Q 023500 80 NEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY-D-NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDK 157 (281)
Q Consensus 80 ~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~-d-~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 157 (281)
.. ...+.........+++.|.+..|+.+.. . +.|...++.... . ..+.. ..-.....|+|+|++..
T Consensus 486 ~~---~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~---~---~~l~~---~~l~~PnGlavd~~~~~ 553 (699)
T 1n7d_A 486 KR---KTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD---I---YSLVT---ENIQWPNGITLDLLSGR 553 (699)
T ss_dssp CE---EEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC---C---CEESC---SSCSSCCCEEECTTTCC
T ss_pred ce---EEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC---e---eEEEe---CCCCCccEEEEeccCCE
Confidence 21 1112222234578889997655444332 2 566655443221 0 11110 01133567999987654
Q ss_pred E-EEeeCCCcEEEEeCCc
Q 023500 158 L-VSCSDDLTIKIWGADI 174 (281)
Q Consensus 158 l-~s~~~d~~i~~w~~~~ 174 (281)
| ++-...+.|..++.+.
T Consensus 554 LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 554 LYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp EEEEETTTTEEEEECSSS
T ss_pred EEEEecCCCeEEEEccCC
Confidence 4 4444566888887753
No 282
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.71 E-value=0.26 Score=39.41 Aligned_cols=116 Identities=9% Similarity=0.066 Sum_probs=75.4
Q ss_pred eeEEEE---cCCCCEEEEee-------------CCCcEEEEecC---CCceeeeeeecCCC-----------CCeeEEEE
Q 023500 6 VRSCAW---SPSGKLLATAS-------------FDATTCIWEDV---GGDYECVATLEGHE-----------NEVKSVSW 55 (281)
Q Consensus 6 i~~~~~---~~~~~~l~tg~-------------~d~~i~lw~~~---~~~~~~~~~~~~h~-----------~~v~~v~~ 55 (281)
+..+.| .|+++++++.. .++.+..||.. +++......+.+.. .....++.
T Consensus 65 ~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvav 144 (334)
T 2p9w_A 65 MSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQ 144 (334)
T ss_dssp EEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEE
T ss_pred eeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEE
Confidence 468889 68888887644 25778889987 55443333433211 24789999
Q ss_pred cCCCCEEEEecCC-CcEEEEEecCCCeeEEeEeec----CCccceeEEEecCCCCeEEEEecCCeEEEEeCCC
Q 023500 56 NASGTLLATCGRD-KSVWIWEVMPGNEFECVSVLQ----GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAED 123 (281)
Q Consensus 56 ~~~~~~l~s~~~d-~~v~~w~~~~~~~~~~~~~~~----~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~ 123 (281)
.++|+..++++.- +. ||.+...........+. ......+.+.++|++.+|+....++.+..+|+..
T Consensus 145 D~~GnaYVt~s~~~~~--I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 145 DRDGNSYVAFALGMPA--IARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CTTSCEEEEEEESSCE--EEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred CCCCCEEEeCCCCCCe--EEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 9999998888766 55 45554443211111111 1123367999999999887776699998888763
No 283
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.68 E-value=0.74 Score=38.02 Aligned_cols=159 Identities=7% Similarity=-0.021 Sum_probs=89.4
Q ss_pred cceeEEEEcCCCC-EEEEeeCCCcEEEEecCCCc--eeeeeeecCCCCCeeEEEEcCC-CCEEEEecCCCcEEEEEecCC
Q 023500 4 RTVRSCAWSPSGK-LLATASFDATTCIWEDVGGD--YECVATLEGHENEVKSVSWNAS-GTLLATCGRDKSVWIWEVMPG 79 (281)
Q Consensus 4 ~~i~~~~~~~~~~-~l~tg~~d~~i~lw~~~~~~--~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~~~d~~v~~w~~~~~ 79 (281)
..+..++|++.+. ++.+-...+.|..++..+.. ......+...-.....+++.+. +++.++-...+.|.+.++...
T Consensus 112 ~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~ 191 (400)
T 3p5b_L 112 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 191 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTC
T ss_pred CcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCC
Confidence 3567889998554 55554556778777765421 0111122223345678899884 555566667788888876533
Q ss_pred CeeEEeEeecCCccceeEEEecCCCCeEEEEe-c-CCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCE
Q 023500 80 NEFECVSVLQGHAQDVKMVQWHPTMDVLFSCS-Y-DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDK 157 (281)
Q Consensus 80 ~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s-~-d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 157 (281)
.. ...+...-...+.+++.|.+..++.+. . .+.|...+++.... ..+.. ..-..++.|++++++..
T Consensus 192 ~~---~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~------~~~~~---~~l~~P~glavd~~~~~ 259 (400)
T 3p5b_L 192 KR---KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI------YSLVT---ENIQWPNGITLDLLSGR 259 (400)
T ss_dssp SE---EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC------EEEEC---SSCSCEEEEEEETTTTE
T ss_pred ce---EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc------EEEEE---CCCCceEEEEEEeCCCE
Confidence 21 111222233467899999766554443 2 36777666543221 11111 11245688999987776
Q ss_pred EEEee-CCCcEEEEeCCc
Q 023500 158 LVSCS-DDLTIKIWGADI 174 (281)
Q Consensus 158 l~s~~-~d~~i~~w~~~~ 174 (281)
|+.+. ....|..+|.+.
T Consensus 260 lY~aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 260 LYWVDSKLHSISSIDVNG 277 (400)
T ss_dssp EEEEETTTTEEEEEETTS
T ss_pred EEEEECCCCEEEEEeCCC
Confidence 66654 456788887753
No 284
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.51 E-value=0.66 Score=36.33 Aligned_cols=147 Identities=11% Similarity=0.154 Sum_probs=71.7
Q ss_pred CCCEEEEeeCC----CcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCC-----CcEEEEEecCCCeeEE
Q 023500 14 SGKLLATASFD----ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRD-----KSVWIWEVMPGNEFEC 84 (281)
Q Consensus 14 ~~~~l~tg~~d----~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d-----~~v~~w~~~~~~~~~~ 84 (281)
++.+++.|+.+ ..+..||..+..+..+..+......-..+. -++..++.||.+ ..+.++|.... .+..
T Consensus 15 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~-~W~~ 91 (302)
T 2xn4_A 15 PKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVY--MAGLVFAVGGFNGSLRVRTVDSYDPVKD-QWTS 91 (302)
T ss_dssp CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEESCBCSSSBCCCEEEEETTTT-EEEE
T ss_pred CCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEE--ECCEEEEEeCcCCCccccceEEECCCCC-ceee
Confidence 45677788754 357888988777655443332222212222 256677777754 35777776533 3333
Q ss_pred eEeecCCccceeEEEecCCCCeEEEEecCC-----eEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEE
Q 023500 85 VSVLQGHAQDVKMVQWHPTMDVLFSCSYDN-----TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV 159 (281)
Q Consensus 85 ~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~-----~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 159 (281)
+..+......-..+.+ ++.+++.|+.++ .+.++|+.. ..|..+..+......| .++. .++..++
T Consensus 92 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~---~~W~~~~~~p~~r~~~----~~~~--~~~~iyv 160 (302)
T 2xn4_A 92 VANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKS---NEWFHVAPMNTRRSSV----GVGV--VGGLLYA 160 (302)
T ss_dssp ECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTT---TEEEEECCCSSCCBSC----EEEE--ETTEEEE
T ss_pred CCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCC---CeEeecCCCCCcccCc----eEEE--ECCEEEE
Confidence 3222211111122222 456667776554 455665543 2354443332211122 1222 2455666
Q ss_pred EeeCC-------CcEEEEeCCc
Q 023500 160 SCSDD-------LTIKIWGADI 174 (281)
Q Consensus 160 s~~~d-------~~i~~w~~~~ 174 (281)
.|+.+ ..+..||...
T Consensus 161 ~GG~~~~~~~~~~~~~~yd~~~ 182 (302)
T 2xn4_A 161 VGGYDVASRQCLSTVECYNATT 182 (302)
T ss_dssp ECCEETTTTEECCCEEEEETTT
T ss_pred EeCCCCCCCccccEEEEEeCCC
Confidence 66532 2466777653
No 285
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=95.49 E-value=0.78 Score=37.03 Aligned_cols=155 Identities=10% Similarity=0.011 Sum_probs=89.7
Q ss_pred eeEEEEcCCCC-EEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCC-CEEEEecCCCcEEEEEecCCCeeE
Q 023500 6 VRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATCGRDKSVWIWEVMPGNEFE 83 (281)
Q Consensus 6 i~~~~~~~~~~-~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~v~~w~~~~~~~~~ 83 (281)
...++|++... ++.+-...+.|..++..+.....+ +.........+++.+.+ .+.++-...+.|.+.++.....
T Consensus 75 ~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~--~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-- 150 (349)
T 3v64_C 75 AIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV--VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-- 150 (349)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE--ECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC--
T ss_pred eEEEEEeccccEEEEEeccCCceEEEecCCCCceEE--EeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce--
Confidence 56788987544 555555667788887765543222 11122344688998854 4556666678888888753321
Q ss_pred EeEeecCCccceeEEEecCCCCe-EEEEecC-CeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEe
Q 023500 84 CVSVLQGHAQDVKMVQWHPTMDV-LFSCSYD-NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 161 (281)
Q Consensus 84 ~~~~~~~~~~~v~~v~~~p~~~~-l~s~s~d-~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 161 (281)
.......-...+.+++.|.+.. +++-... +.|...+++.... ..+.. ..-.....++++|++..|+..
T Consensus 151 -~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~------~~~~~---~~~~~PnGla~d~~~~~lY~a 220 (349)
T 3v64_C 151 -KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR------RIIAD---THLFWPNGLTIDYAGRRMYWV 220 (349)
T ss_dssp -EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC------EESCC---SSCSCEEEEEEETTTTEEEEE
T ss_pred -EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCc------EEEEE---CCCCCcceEEEeCCCCEEEEE
Confidence 1112222344688999996554 4554444 6777766543211 11110 112346789999876655554
Q ss_pred e-CCCcEEEEeCCc
Q 023500 162 S-DDLTIKIWGADI 174 (281)
Q Consensus 162 ~-~d~~i~~w~~~~ 174 (281)
. ..+.|..++.+.
T Consensus 221 D~~~~~I~~~~~dG 234 (349)
T 3v64_C 221 DAKHHVIERANLDG 234 (349)
T ss_dssp ETTTTEEEEEETTS
T ss_pred ECCCCEEEEEeCCC
Confidence 4 556788887653
No 286
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.45 E-value=0.57 Score=35.18 Aligned_cols=111 Identities=15% Similarity=0.192 Sum_probs=61.5
Q ss_pred CCeeEEEEcCCCCEEEEecCCCcEEEEEecCCC--e--e-EEeEeec-CCccceeEEEecCCCCeEEEEecCCeEEEEeC
Q 023500 48 NEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN--E--F-ECVSVLQ-GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 121 (281)
Q Consensus 48 ~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~--~--~-~~~~~~~-~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~ 121 (281)
..+..++|+|+|.+.+. .++. +|...... . + .....+. .--..-.++-|.|++.+.++ .|+.|+-++.
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~--Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDK--IYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTE--EEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESC
T ss_pred ccceeEEECCCccEEEE--eCCe--EEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCC
Confidence 37789999999987666 4554 56654321 0 0 0001110 00111378899999998888 5698876654
Q ss_pred CCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeCCCcEE
Q 023500 122 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIK 168 (281)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~ 168 (281)
.+.....|.-..+. ....-=..+..|.|.|++.+.+.. |+.+.
T Consensus 115 P~~~~~~Wl~~a~~--vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 115 PQSDTDNWIARATE--VGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp CCSTTCCHHHHSEE--EECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred CcCCCCceeccccE--eccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 33333333111000 000011356889999999765554 77643
No 287
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.36 E-value=0.94 Score=37.15 Aligned_cols=194 Identities=10% Similarity=0.012 Sum_probs=103.9
Q ss_pred ceeEEEEcCCC-CEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCC-EEEEecCCCcEEEEEecCCCee
Q 023500 5 TVRSCAWSPSG-KLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVMPGNEF 82 (281)
Q Consensus 5 ~i~~~~~~~~~-~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~v~~w~~~~~~~~ 82 (281)
....++|++.+ .++.+-...+.|..++..+.....+ +.........+++.+.+. +.++-...+.|.+.++.....
T Consensus 117 ~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~--~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~- 193 (386)
T 3v65_B 117 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV--VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR- 193 (386)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEE--ECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC-
T ss_pred ccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEE--EeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce-
Confidence 35678898754 4555555667788888766543222 121223346788888544 455666667777776642221
Q ss_pred EEeEeecCCccceeEEEecCCCCeE-EEEecC-CeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEE
Q 023500 83 ECVSVLQGHAQDVKMVQWHPTMDVL-FSCSYD-NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 160 (281)
Q Consensus 83 ~~~~~~~~~~~~v~~v~~~p~~~~l-~s~s~d-~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 160 (281)
...+...-.....+++.|.+..+ ++-... +.|...+.+... ...+.. ..-.....|+|+|++..|+.
T Consensus 194 --~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~------~~~~~~---~~~~~PnGlavd~~~~~lY~ 262 (386)
T 3v65_B 194 --KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG------RRIIAD---THLFWPNGLTIDYAGRRMYW 262 (386)
T ss_dssp --EEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS------CEEEEC---SSCSCEEEEEEEGGGTEEEE
T ss_pred --EEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC------cEEEEE---CCCCCeeeEEEeCCCCEEEE
Confidence 11122223446788999876654 444444 567766654321 111111 11234678999987665555
Q ss_pred e-eCCCcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecCCCCcEEEEe
Q 023500 161 C-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFV 224 (281)
Q Consensus 161 ~-~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~~~~~~ 224 (281)
. ...+.|..++.+.... +.+ .. ........+....+.++.+-...+.+..++
T Consensus 263 aD~~~~~I~~~d~dG~~~---------~~~--~~-~~~~~P~giav~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 263 VDAKHHVIERANLDGSHR---------KAV--IS-QGLPHPFAITVFEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp EETTTTEEEEECTTSCSC---------EEE--EC-SSCSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred EECCCCEEEEEeCCCCee---------EEE--EE-CCCCCceEEEEECCEEEEeeCCCCeEEEEE
Confidence 4 4556788887653211 000 00 011223445554555566655666666664
No 288
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.17 E-value=0.86 Score=35.65 Aligned_cols=147 Identities=17% Similarity=0.260 Sum_probs=73.3
Q ss_pred CCCEEEEeeCCC-----cEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCC-----cEEEEEecCCCeeE
Q 023500 14 SGKLLATASFDA-----TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDK-----SVWIWEVMPGNEFE 83 (281)
Q Consensus 14 ~~~~l~tg~~d~-----~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~-----~v~~w~~~~~~~~~ 83 (281)
++++++.|+.++ .+.+||..+.++..+..+........++.+ ++..++.||.++ .+.++|+... .+.
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~-~W~ 137 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSN-EWF 137 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTT-EEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCC-eEe
Confidence 667888888653 578889888777655544322222222222 566777777553 4556665432 333
Q ss_pred EeEeecCCccceeEEEecCCCCeEEEEecC-------CeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCC
Q 023500 84 CVSVLQGHAQDVKMVQWHPTMDVLFSCSYD-------NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD 156 (281)
Q Consensus 84 ~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d-------~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 156 (281)
.+..+........++.+ ++.+++.|+.+ ..+.++|+... .|..+..+......| .++.+ ++.
T Consensus 138 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~----~~~~~--~~~ 206 (302)
T 2xn4_A 138 HVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTN---EWTYIAEMSTRRSGA----GVGVL--NNL 206 (302)
T ss_dssp EECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTT---EEEEECCCSSCCBSC----EEEEE--TTE
T ss_pred ecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCC---cEEECCCCccccccc----cEEEE--CCE
Confidence 33222211111112222 45566666543 34667766542 354443332211122 12222 456
Q ss_pred EEEEeeCCC-----cEEEEeCCc
Q 023500 157 KLVSCSDDL-----TIKIWGADI 174 (281)
Q Consensus 157 ~l~s~~~d~-----~i~~w~~~~ 174 (281)
.++.|+.++ .+.+||.+.
T Consensus 207 iyv~GG~~~~~~~~~~~~yd~~~ 229 (302)
T 2xn4_A 207 LYAVGGHDGPLVRKSVEVYDPTT 229 (302)
T ss_dssp EEEECCBSSSSBCCCEEEEETTT
T ss_pred EEEECCCCCCcccceEEEEeCCC
Confidence 677776543 577777654
No 289
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.16 E-value=1.5 Score=38.20 Aligned_cols=55 Identities=18% Similarity=0.094 Sum_probs=34.0
Q ss_pred cEEEEecCCCceeeeeeecCCC--------CCeeEEEEcCCCC---EEEEecCCCcEEEEEecCCCe
Q 023500 26 TTCIWEDVGGDYECVATLEGHE--------NEVKSVSWNASGT---LLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 26 ~i~lw~~~~~~~~~~~~~~~h~--------~~v~~v~~~~~~~---~l~s~~~d~~v~~w~~~~~~~ 81 (281)
.|..+|..+++.........|. .++ -+...++|+ .++.++.++.+.+.|..+++.
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 338 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMV-LTDQPVNGKMTPLLSHIDRNGILYTLNRENGNL 338 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEEETTEEEEEEEEECTTSEEEEEETTTCCE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCE-EEecccCCcEEEEEEEeCCCcEEEEEECCCCCE
Confidence 5888898887754444333332 222 122234674 567788899999999876654
No 290
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=94.86 E-value=2.2 Score=38.71 Aligned_cols=158 Identities=6% Similarity=-0.021 Sum_probs=88.4
Q ss_pred ceeEEEEcCC-CCEEEEeeCCCcEEEEecCCCce--eeeeeecCCCCCeeEEEEcCCCC-EEEEecCCCcEEEEEecCCC
Q 023500 5 TVRSCAWSPS-GKLLATASFDATTCIWEDVGGDY--ECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVMPGN 80 (281)
Q Consensus 5 ~i~~~~~~~~-~~~l~tg~~d~~i~lw~~~~~~~--~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~v~~w~~~~~~ 80 (281)
.+..++|++. +.++.+-...+.|..++..+... .....+...-.....|++.+.++ +.++-...+.|.+.++....
T Consensus 425 ~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~ 504 (791)
T 3m0c_C 425 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 504 (791)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS
T ss_pred ceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCe
Confidence 4567888884 44555555566777777654210 11122222334567899988765 45566677888888875332
Q ss_pred eeEEeEeecCCccceeEEEecCCCCeEEEEe-cC-CeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEE
Q 023500 81 EFECVSVLQGHAQDVKMVQWHPTMDVLFSCS-YD-NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKL 158 (281)
Q Consensus 81 ~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s-~d-~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 158 (281)
. ...+...-.....|++.|....|+.+. .. +.|...+++... ...+.. ..-..+..|++++.+..|
T Consensus 505 ~---~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~------~~~lv~---~~l~~P~GLavD~~~~~L 572 (791)
T 3m0c_C 505 R---KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD------IYSLVT---ENIQWPNGITLDLLSGRL 572 (791)
T ss_dssp E---EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC------EEEEEC---SSCSCEEEEEEETTTTEE
T ss_pred E---EEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc------eEEEEe---CCCCCceEEEEecCCCeE
Confidence 1 111222334468899999765554443 33 567766654321 111111 112457889999776666
Q ss_pred EEee-CCCcEEEEeCCc
Q 023500 159 VSCS-DDLTIKIWGADI 174 (281)
Q Consensus 159 ~s~~-~d~~i~~w~~~~ 174 (281)
+... ....|..++++.
T Consensus 573 YwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 573 YWVDSKLHSISSIDVNG 589 (791)
T ss_dssp EEEETTTTEEEEEETTS
T ss_pred EEEeCCCCcEEEEecCC
Confidence 6554 445777777653
No 291
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=94.71 E-value=1.3 Score=35.19 Aligned_cols=156 Identities=7% Similarity=0.036 Sum_probs=88.9
Q ss_pred ceeEEEEcCCC-CEEEEeeCCCcEEEEecCC----CceeeeeeecCCCCCeeEEEEcCCCC-EEEEecCCCcEEEEEecC
Q 023500 5 TVRSCAWSPSG-KLLATASFDATTCIWEDVG----GDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVMP 78 (281)
Q Consensus 5 ~i~~~~~~~~~-~~l~tg~~d~~i~lw~~~~----~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~v~~w~~~~ 78 (281)
....++|++.+ .++.+-...+.|..++..+ .... ..+...-.....+++.+.+. ..++-...+.|.+.++..
T Consensus 31 ~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~--~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g 108 (316)
T 1ijq_A 31 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD--TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 108 (316)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CE--EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccE--EEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCC
Confidence 34578899865 4555655667888888764 2111 11222223457889987544 455666778899888753
Q ss_pred CCeeEEeEeecCCccceeEEEecCCCCeEEEEecC--CeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCC
Q 023500 79 GNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYD--NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD 156 (281)
Q Consensus 79 ~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d--~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 156 (281)
... .. ...........+++.|.+..++.+... +.|...+++... ...+.. ..-.....+++++++.
T Consensus 109 ~~~-~~--~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~------~~~~~~---~~~~~P~gla~d~~~~ 176 (316)
T 1ijq_A 109 VKR-KT--LFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD------IYSLVT---ENIQWPNGITLDLLSG 176 (316)
T ss_dssp SSE-EE--EEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC------EEEEEC---SSCSCEEEEEEETTTT
T ss_pred Cce-EE--EEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC------eEEEEE---CCCCCceEEEEeccCC
Confidence 221 11 122223356788999976655444433 577766654321 111111 1123567899998776
Q ss_pred EEEEee-CCCcEEEEeCCc
Q 023500 157 KLVSCS-DDLTIKIWGADI 174 (281)
Q Consensus 157 ~l~s~~-~d~~i~~w~~~~ 174 (281)
.|+.+. ..+.|..++.+.
T Consensus 177 ~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 177 RLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp EEEEEETTTTEEEEEETTS
T ss_pred EEEEEECCCCeEEEEecCC
Confidence 665554 556888888763
No 292
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=94.51 E-value=1.5 Score=35.35 Aligned_cols=113 Identities=12% Similarity=0.021 Sum_probs=62.6
Q ss_pred CCCeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEEeEee----cCCccceeEEEecCC----CCeEEEEe--cCCeE
Q 023500 47 ENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVL----QGHAQDVKMVQWHPT----MDVLFSCS--YDNTI 116 (281)
Q Consensus 47 ~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~----~~~~~~v~~v~~~p~----~~~l~s~s--~d~~v 116 (281)
-..-+.++|.|+|+++++--..+.|++++...+.. ..+..+ .........++++|+ +.++++-+ .++.|
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~-~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRK-TELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE-EEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcE-eeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 34457999999999888877688888876433322 222221 223456789999996 33444322 34455
Q ss_pred EEEeCCCCC-----CCCceeeeeeeeccCCccccEEEEEEccCCCEEEEee
Q 023500 117 KVWWAEDTD-----SDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS 162 (281)
Q Consensus 117 ~~w~~~~~~-----~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 162 (281)
.-|.....+ ....+.+..-......|. -..|.|.|++.+.++.+
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~--g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHN--GGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEEEECCCSSCC--CCCEEECTTSCEEEECB
T ss_pred EEEEeCCCCcccccCCCcEEEEEcCCCCCCcc--CccccCCCCCCEEEEEC
Confidence 545544311 111122211111122343 34689999998777754
No 293
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=94.50 E-value=1.2 Score=35.88 Aligned_cols=106 Identities=15% Similarity=0.128 Sum_probs=57.8
Q ss_pred eeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEEeEee---cCCccceeEEEecCC---C-CeEEEEecC-----CeEE
Q 023500 50 VKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVL---QGHAQDVKMVQWHPT---M-DVLFSCSYD-----NTIK 117 (281)
Q Consensus 50 v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~---~~~~~~v~~v~~~p~---~-~~l~s~s~d-----~~v~ 117 (281)
-+.++|.|+|+++++- .++.|++++ .+. ...+..+ .........++++|+ + .++++-+.. +.|.
T Consensus 33 P~~ia~~pdG~l~V~e-~~g~I~~i~--~g~-~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 33 PWALAFLPDGGMLIAE-RPGRIRLFR--EGR-LSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp EEEEEECTTSCEEEEE-TTTEEEEEE--TTE-EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred ceEEEEcCCCeEEEEe-CCCeEEEEE--CCC-ccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 4689999999866664 458888887 332 2222221 122345789999998 3 444544433 5666
Q ss_pred EEeCCCCCCCCceeeee-eee-ccCCccccEEEEEEccCCCEEEEe
Q 023500 118 VWWAEDTDSDNWHCVQT-ISE-SNNGHSSTIWALSFNAKGDKLVSC 161 (281)
Q Consensus 118 ~w~~~~~~~~~~~~~~~-~~~-~~~~h~~~v~~~~~~~~~~~l~s~ 161 (281)
.++.........+.+.. +.. ....|. ...++|.|++.+.++-
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~--~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHS--GGRIAFGPDGMLYVTT 152 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCC--CCCEEECTTSCEEEEC
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcC--CceEEECCCCCEEEEE
Confidence 66654321111111111 110 111233 3579999999766664
No 294
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=94.47 E-value=1.6 Score=35.24 Aligned_cols=232 Identities=10% Similarity=-0.038 Sum_probs=120.4
Q ss_pred ceeEEEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCE-EEEecCCCcEEEEEecCCCeeE
Q 023500 5 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL-LATCGRDKSVWIWEVMPGNEFE 83 (281)
Q Consensus 5 ~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~-l~s~~~d~~v~~w~~~~~~~~~ 83 (281)
..+|.+..+++.++++ ..+.|+..+..+.....+ +. .......++|++.... +.+-...+.|..+++..... +
T Consensus 35 ~~~C~~~~~~~~ll~~--~~~~I~~i~~~g~~~~~~--~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~-~ 108 (349)
T 3v64_C 35 RRSCKALGPEPVLLFA--NRIDIRQVLPHRSEYTLL--LN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV-E 108 (349)
T ss_dssp SSCEEESSSCCEEEEE--CBSCEEEECTTSCCEEEE--EC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-E
T ss_pred CCcccccccCceeEee--cccceEEEeCCCCeeEEe--ec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCc-e
Confidence 3455555553333333 234577777665543322 22 2344679999986555 45555677888887754332 1
Q ss_pred EeEeecCCccceeEEEecCC-CCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEee
Q 023500 84 CVSVLQGHAQDVKMVQWHPT-MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS 162 (281)
Q Consensus 84 ~~~~~~~~~~~v~~v~~~p~-~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 162 (281)
............+++.+. +.++++-...+.|.+.+.+... ...+.. ..-..+..++++|.+..|+...
T Consensus 109 --~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~------~~~l~~---~~l~~P~~iavdp~~g~ly~td 177 (349)
T 3v64_C 109 --EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH------RKVLLW---QSLEKPRAIALHPMEGTIYWTD 177 (349)
T ss_dssp --EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS------CEEEEC---TTCSCEEEEEEETTTTEEEEEE
T ss_pred --EEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc------eEEEEe---CCCCCcceEEEecCcCeEEEec
Confidence 112222234567888875 4456666667888888765432 111111 1123467899998665554443
Q ss_pred -CC-CcEEEEeCCccccccCCCCcccceeEEeecccCcceEEEEeCC-Cc-eeeecCCCCcEEEEecccCCCcCCcccee
Q 023500 163 -DD-LTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR-EG-IIASGAADDSVQFFVESKDDLIDGPSYKM 238 (281)
Q Consensus 163 -~d-~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 238 (281)
.. +.|..++.+...... +....-.....+++++ ++ ++.+-...+.++.++..... ...
T Consensus 178 ~~~~~~I~r~~~dG~~~~~------------~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~------~~~ 239 (349)
T 3v64_C 178 WGNTPRIEASSMDGSGRRI------------IADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH------RKA 239 (349)
T ss_dssp CSSSCEEEEEETTSCSCEE------------SCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS------CEE
T ss_pred cCCCCEEEEEeCCCCCcEE------------EEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCc------eEE
Confidence 33 667777665322110 0000112345566664 33 45555556677777553211 111
Q ss_pred eeeeccCCCCCeeEEEEcCCCCeeEEEeCCCCeEEEEE
Q 023500 239 LLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 276 (281)
Q Consensus 239 ~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~Dg~v~iw~ 276 (281)
+... .-.....+++. +..++.+-...+.|...+
T Consensus 240 ~~~~---~~~~P~giav~--~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 240 VISQ---GLPHPFAITVF--EDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp EECS---SCSSEEEEEEE--TTEEEEEETTTTEEEEEE
T ss_pred EEeC---CCCCceEEEEE--CCEEEEecCCCCeEEEEE
Confidence 1111 12235567663 235666666667776665
No 295
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.39 E-value=1.3 Score=37.36 Aligned_cols=111 Identities=10% Similarity=0.104 Sum_probs=58.1
Q ss_pred CeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEEeEeecC------CccceeEEEecCC----CCeEEEEec------
Q 023500 49 EVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQG------HAQDVKMVQWHPT----MDVLFSCSY------ 112 (281)
Q Consensus 49 ~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~~~------~~~~v~~v~~~p~----~~~l~s~s~------ 112 (281)
.-+.++|.|+|+++++-...+.|++++...+.. ..+..+.. .......++|+|+ +.++++-+.
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~-~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSV-KTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCE-EEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcE-eEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 446899999999888765545677665433322 22222221 2345668999995 444444432
Q ss_pred ------CCeEEEEeCCCCCC--CCceeeeeeeeccCCccccEEEEEEccCCCEEEEee
Q 023500 113 ------DNTIKVWWAEDTDS--DNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS 162 (281)
Q Consensus 113 ------d~~v~~w~~~~~~~--~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 162 (281)
...|.-++...... ...+.+.........| ....|.|.|++.+.++.+
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H--~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDH--QSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSC--CEEEEEECTTSCEEEEEC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCC--CCCeEeECCCCeEEEEEC
Confidence 12344443322110 1111111111111234 357899999998766644
No 296
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.38 E-value=1.4 Score=34.45 Aligned_cols=147 Identities=7% Similarity=0.090 Sum_probs=74.5
Q ss_pred CCCEEEEeeCC----CcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCC------CcEEEEEecCCCeeE
Q 023500 14 SGKLLATASFD----ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRD------KSVWIWEVMPGNEFE 83 (281)
Q Consensus 14 ~~~~l~tg~~d----~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d------~~v~~w~~~~~~~~~ 83 (281)
++++++.|+.+ ..+.+||..++++..+..+........++.+ ++..++.||.+ ..+.++|.... .+.
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~-~W~ 131 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTE-SWH 131 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTT-EEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCC-ceE
Confidence 66788888865 5678889888877655544322222222222 56677777765 45777887543 333
Q ss_pred EeEeecCCccceeEEEecCCCCeEEEEec---------CCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccC
Q 023500 84 CVSVLQGHAQDVKMVQWHPTMDVLFSCSY---------DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK 154 (281)
Q Consensus 84 ~~~~~~~~~~~v~~v~~~p~~~~l~s~s~---------d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 154 (281)
.+..+......-.++. -++.+++.|+. -..+.+||++.. .|..+..+......| .++.+ +
T Consensus 132 ~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~----~~~~~--~ 200 (306)
T 3ii7_A 132 TKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATE---TWTELCPMIEARKNH----GLVFV--K 200 (306)
T ss_dssp EECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTTT---EEEEECCCSSCCBSC----EEEEE--T
T ss_pred eCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCCC---eEEECCCccchhhcc----eEEEE--C
Confidence 3222221111111222 24556666654 234667766543 354443322211122 12222 5
Q ss_pred CCEEEEeeCC-----CcEEEEeCCc
Q 023500 155 GDKLVSCSDD-----LTIKIWGADI 174 (281)
Q Consensus 155 ~~~l~s~~~d-----~~i~~w~~~~ 174 (281)
++.++.|+.+ ..+.+||...
T Consensus 201 ~~i~v~GG~~~~~~~~~~~~yd~~~ 225 (306)
T 3ii7_A 201 DKIFAVGGQNGLGGLDNVEYYDIKL 225 (306)
T ss_dssp TEEEEECCEETTEEBCCEEEEETTT
T ss_pred CEEEEEeCCCCCCCCceEEEeeCCC
Confidence 5566666643 3466777654
No 297
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=94.36 E-value=1.4 Score=34.33 Aligned_cols=148 Identities=12% Similarity=0.157 Sum_probs=73.9
Q ss_pred CCCEEEEee-CC-----CcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCC-----CcEEEEEecCCCe-
Q 023500 14 SGKLLATAS-FD-----ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRD-----KSVWIWEVMPGNE- 81 (281)
Q Consensus 14 ~~~~l~tg~-~d-----~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d-----~~v~~w~~~~~~~- 81 (281)
++.+++.|+ .+ ..+.+||..++++..+..+........++. .++..++.||.+ ..+.++|+.....
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 456777887 33 367889988877655443332222222222 356677777754 4678888764430
Q ss_pred -eEEeEeecCCccceeEEEecCCCCeEEEEecCC-----eEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCC
Q 023500 82 -FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN-----TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG 155 (281)
Q Consensus 82 -~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~-----~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 155 (281)
+..+..+......-..+.. ++.+++.|+.++ .+.++|.... .|..+..+......|. ++. .++
T Consensus 92 ~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~---~W~~~~~~p~~r~~~~----~~~--~~~ 160 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNID---QWSMLGDMQTAREGAG----LVV--ASG 160 (301)
T ss_dssp CCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTT---EEEEEEECSSCCBSCE----EEE--ETT
T ss_pred eeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCC---eEEECCCCCCCcccce----EEE--ECC
Confidence 3333222211111122222 456667766543 5667765432 3544433322111221 222 255
Q ss_pred CEEEEeeCC-----CcEEEEeCCc
Q 023500 156 DKLVSCSDD-----LTIKIWGADI 174 (281)
Q Consensus 156 ~~l~s~~~d-----~~i~~w~~~~ 174 (281)
..++.|+.+ ..+..||...
T Consensus 161 ~iyv~GG~~~~~~~~~~~~~d~~~ 184 (301)
T 2vpj_A 161 VIYCLGGYDGLNILNSVEKYDPHT 184 (301)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTT
T ss_pred EEEEECCCCCCcccceEEEEeCCC
Confidence 666666644 3466777653
No 298
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.33 E-value=2.7 Score=37.50 Aligned_cols=221 Identities=9% Similarity=-0.036 Sum_probs=105.6
Q ss_pred CCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEE-EecCCCcEEEEEecCCCe-eEEeEeecCCccceeEEEec
Q 023500 24 DATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLA-TCGRDKSVWIWEVMPGNE-FECVSVLQGHAQDVKMVQWH 101 (281)
Q Consensus 24 d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d~~v~~w~~~~~~~-~~~~~~~~~~~~~v~~v~~~ 101 (281)
.+.|+..+..+.....+ +. ....+..++|.+.+..|+ +-...+.|+.+++..... ......+.........+++.
T Consensus 385 ~~~I~~id~~~~~~~~~--~~-~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD 461 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSL--IP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 461 (699)
T ss_dssp TTC-CEECTTSCCEECC--SC-CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECC
T ss_pred ccceEEEeCCCCcceee--ec-cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEE
Confidence 34566666655433211 11 224456889998666554 445567888888753100 00111111112234567777
Q ss_pred CC-CCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeC-C-CcEEEEeCCccccc
Q 023500 102 PT-MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-D-LTIKIWGADITRMQ 178 (281)
Q Consensus 102 p~-~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-d-~~i~~w~~~~~~~~ 178 (281)
+. +.++++-...+.|.+.+.+... ...+.. .....+..++++|.+..|+.... . +.|..++++.....
T Consensus 462 ~~~g~LY~tD~~~~~I~v~d~dg~~------~~~l~~---~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~ 532 (699)
T 1n7d_A 462 WIHSNIYWTDSVLGTVSVADTKGVK------RKTLFR---EQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 532 (699)
T ss_dssp CSSSBCEECCTTTSCEEEEBSSSCC------EEEECC---CSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCC
T ss_pred eeCCcEEEEeccCCeEEEEecCCCc------eEEEEe---CCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCee
Confidence 54 4455665666788888654321 111111 11123456888886555444332 2 56666655421110
Q ss_pred cCCCCcccceeEEeecccCcceEEEEeCCC--ceeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEc
Q 023500 179 SGDGYASWRHLCTISGYHDRTIFSVHWSRE--GIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWS 256 (281)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 256 (281)
.+ .. ..-.....|.++++ .++++-...+.|..++.... ....+.. ..........+++.
T Consensus 533 ---------~l--~~-~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~------~~~~~~~-~~~~~~~P~glavd 593 (699)
T 1n7d_A 533 ---------SL--VT-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG------NRKTILE-DEKRLAHPFSLAVF 593 (699)
T ss_dssp ---------EE--SC-SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS------CCEEECC-CSSSCSSCCCCEEE
T ss_pred ---------EE--Ee-CCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC------ceEEEEe-cCCcCCCceEeEEE
Confidence 00 00 00112334566643 34555556667777755321 1111111 11111223345555
Q ss_pred CCCCeeEEEeCCCCeEEEEEc
Q 023500 257 PGERRLLASASDDGMIKIWEL 277 (281)
Q Consensus 257 ~~~~~~~~s~~~Dg~v~iw~~ 277 (281)
. ..++.+....+.|..++.
T Consensus 594 ~--~~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 594 E--DKVFWTDIINEAIFSANR 612 (699)
T ss_dssp T--TEEEEECSTTTCEEEEET
T ss_pred C--CEEEEEeCCCCeEEEEEc
Confidence 4 357777777778888774
No 299
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=94.28 E-value=1.5 Score=34.22 Aligned_cols=147 Identities=11% Similarity=0.184 Sum_probs=75.1
Q ss_pred CCCEEEEeeCC-----CcEEEEecCCCc---eeeeeeecCCCCCeeEEEEcCCCCEEEEecCCC-----cEEEEEecCCC
Q 023500 14 SGKLLATASFD-----ATTCIWEDVGGD---YECVATLEGHENEVKSVSWNASGTLLATCGRDK-----SVWIWEVMPGN 80 (281)
Q Consensus 14 ~~~~l~tg~~d-----~~i~lw~~~~~~---~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~-----~v~~w~~~~~~ 80 (281)
++++++.|+.+ +.+.+||..+++ +..+..+........++.+ ++..++.||.++ .+.++|+...
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~- 138 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNID- 138 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTT-
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCC-
Confidence 56788888865 358889987776 6555443322222222322 566777776543 5677776533
Q ss_pred eeEEeEeecCCccceeEEEecCCCCeEEEEecC-----CeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCC
Q 023500 81 EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYD-----NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG 155 (281)
Q Consensus 81 ~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d-----~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 155 (281)
.+..+.........-.++.+ ++.+++.|+.+ ..+.++|+... .|..+..+......| .++.+ ++
T Consensus 139 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~---~W~~~~~~p~~r~~~----~~~~~--~~ 207 (301)
T 2vpj_A 139 QWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTG---HWTNVTPMATKRSGA----GVALL--ND 207 (301)
T ss_dssp EEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTT---EEEEECCCSSCCBSC----EEEEE--TT
T ss_pred eEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCC---cEEeCCCCCcccccc----eEEEE--CC
Confidence 33333332221111112222 55667777655 35677766543 354443222111112 12222 45
Q ss_pred CEEEEeeCC-----CcEEEEeCCc
Q 023500 156 DKLVSCSDD-----LTIKIWGADI 174 (281)
Q Consensus 156 ~~l~s~~~d-----~~i~~w~~~~ 174 (281)
..++.|+.+ ..+.+||.+.
T Consensus 208 ~i~v~GG~~~~~~~~~v~~yd~~~ 231 (301)
T 2vpj_A 208 HIYVVGGFDGTAHLSSVEAYNIRT 231 (301)
T ss_dssp EEEEECCBCSSSBCCCEEEEETTT
T ss_pred EEEEEeCCCCCcccceEEEEeCCC
Confidence 666777654 3577777653
No 300
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=94.19 E-value=1.8 Score=34.93 Aligned_cols=143 Identities=8% Similarity=0.097 Sum_probs=83.7
Q ss_pred CCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCC----CC---E-EEEecC--CCcEEEEEecCC-Cee
Q 023500 14 SGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS----GT---L-LATCGR--DKSVWIWEVMPG-NEF 82 (281)
Q Consensus 14 ~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~----~~---~-l~s~~~--d~~v~~w~~~~~-~~~ 82 (281)
...+++.....+-+.+||.... .++.+.. +.++.|..-|+ |+ + +++.-. +++|.++++... .+.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~G~---~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l 113 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLDGK---MLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTL 113 (355)
T ss_dssp GGCEEEEEETTTEEEEEETTSC---EEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCE
T ss_pred CccEEEEEcCCCCEEEEcCCCc---EEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCce
Confidence 3455666677788999998443 2445542 66777777663 22 2 333344 689999998532 222
Q ss_pred EEeEe----ecCCccceeEEEe--cCCCC--eEEEEecCCeEEEEeCCCCCC--CCceeeeeeeeccCCccccEEEEEEc
Q 023500 83 ECVSV----LQGHAQDVKMVQW--HPTMD--VLFSCSYDNTIKVWWAEDTDS--DNWHCVQTISESNNGHSSTIWALSFN 152 (281)
Q Consensus 83 ~~~~~----~~~~~~~v~~v~~--~p~~~--~l~s~s~d~~v~~w~~~~~~~--~~~~~~~~~~~~~~~h~~~v~~~~~~ 152 (281)
..+.. +..-...+..+++ +|... +++....++.+..|++..... ...+.++++.. ..++-.+...
T Consensus 114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-----gsq~EgcvvD 188 (355)
T 3amr_A 114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-----NSQTEGMAAD 188 (355)
T ss_dssp EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-----SSCEEEEEEE
T ss_pred eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-----CCCcceEEEc
Confidence 21111 0011145666777 67533 577888889999988754222 12334444432 2456677777
Q ss_pred cCCCEEEEeeCCCc
Q 023500 153 AKGDKLVSCSDDLT 166 (281)
Q Consensus 153 ~~~~~l~s~~~d~~ 166 (281)
+....|+.+-.+.-
T Consensus 189 d~~g~Lyv~eEd~G 202 (355)
T 3amr_A 189 DEYGRLYIAEEDEA 202 (355)
T ss_dssp TTTTEEEEEETTTE
T ss_pred CCCCeEEEecccce
Confidence 77778888887744
No 301
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=94.14 E-value=1.7 Score=34.49 Aligned_cols=156 Identities=8% Similarity=-0.042 Sum_probs=88.7
Q ss_pred eeEEEEcCC-CCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCC-CCEEEEecCCCcEEEEEecCCCeeE
Q 023500 6 VRSCAWSPS-GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS-GTLLATCGRDKSVWIWEVMPGNEFE 83 (281)
Q Consensus 6 i~~~~~~~~-~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~~~d~~v~~w~~~~~~~~~ 83 (281)
...++|++. +.++.+-...+.|..++..+..... ..+...-.....+++.+. +.+.++-...+.|.+.++..... .
T Consensus 37 ~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~-~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~ 114 (318)
T 3sov_A 37 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ-NVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR-K 114 (318)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCC-EEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-E
T ss_pred cEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceE-EEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE-E
Confidence 456788884 4555665566778888776542111 111111234567888874 45556666778898888753221 1
Q ss_pred EeEeecCCccceeEEEecCCCCeEEEEec--CCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEe
Q 023500 84 CVSVLQGHAQDVKMVQWHPTMDVLFSCSY--DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 161 (281)
Q Consensus 84 ~~~~~~~~~~~v~~v~~~p~~~~l~s~s~--d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 161 (281)
. ........-..+++.|.+..++.+.. .+.|...+.+... ...+.. ..-...+.+++++++..|+.+
T Consensus 115 ~--l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~------~~~~~~---~~l~~Pnglavd~~~~~lY~a 183 (318)
T 3sov_A 115 V--LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS------RFIIIN---SEIYWPNGLTLDYEEQKLYWA 183 (318)
T ss_dssp E--EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS------CEEEEC---SSCSCEEEEEEETTTTEEEEE
T ss_pred E--EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC------eEEEEE---CCCCCccEEEEeccCCEEEEE
Confidence 1 12233344678899987665554442 4677666554321 111111 112346789999876665555
Q ss_pred e-CCCcEEEEeCCc
Q 023500 162 S-DDLTIKIWGADI 174 (281)
Q Consensus 162 ~-~d~~i~~w~~~~ 174 (281)
. ..+.|..++.+.
T Consensus 184 D~~~~~I~~~d~dG 197 (318)
T 3sov_A 184 DAKLNFIHKSNLDG 197 (318)
T ss_dssp ETTTTEEEEEETTS
T ss_pred ECCCCEEEEEcCCC
Confidence 4 566788887753
No 302
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=94.04 E-value=1.7 Score=34.09 Aligned_cols=147 Identities=14% Similarity=0.211 Sum_probs=73.8
Q ss_pred CCCEEEEeeC----C-----CcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCC-----CcEEEEEecCC
Q 023500 14 SGKLLATASF----D-----ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRD-----KSVWIWEVMPG 79 (281)
Q Consensus 14 ~~~~l~tg~~----d-----~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d-----~~v~~w~~~~~ 79 (281)
++++++.|+. + +.+.+||..+.++..+..+........++.+ ++..++.||.+ ..+.++|+...
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCC
Confidence 5677788876 2 3578888888776655443322222222332 56677777644 35677776533
Q ss_pred CeeEEeEeecCCccceeEEEecCCCCeEEEEecC-----CeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccC
Q 023500 80 NEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYD-----NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK 154 (281)
Q Consensus 80 ~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d-----~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 154 (281)
.+..+..+......-.++.+ ++.+++.|+.+ ..+.++|+... .|..+..+......| .++.+ +
T Consensus 148 -~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~----~~~~~--~ 215 (308)
T 1zgk_A 148 -EWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERN---EWRMITAMNTIRSGA----GVCVL--H 215 (308)
T ss_dssp -EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTT---EEEECCCCSSCCBSC----EEEEE--T
T ss_pred -eEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCC---eEeeCCCCCCccccc----eEEEE--C
Confidence 33322222211111122222 45666776655 35677766432 344333222111122 22222 5
Q ss_pred CCEEEEeeCC-----CcEEEEeCCc
Q 023500 155 GDKLVSCSDD-----LTIKIWGADI 174 (281)
Q Consensus 155 ~~~l~s~~~d-----~~i~~w~~~~ 174 (281)
+..++.|+.+ ..+.+||.+.
T Consensus 216 ~~iyv~GG~~~~~~~~~v~~yd~~~ 240 (308)
T 1zgk_A 216 NCIYAAGGYDGQDQLNSVERYDVET 240 (308)
T ss_dssp TEEEEECCBCSSSBCCCEEEEETTT
T ss_pred CEEEEEeCCCCCCccceEEEEeCCC
Confidence 5666667654 3577777654
No 303
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.00 E-value=1.7 Score=33.95 Aligned_cols=104 Identities=6% Similarity=-0.043 Sum_probs=56.0
Q ss_pred CCEEEEeeCC--CcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCC----CcEEEEEecCCCeeEEeEee
Q 023500 15 GKLLATASFD--ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRD----KSVWIWEVMPGNEFECVSVL 88 (281)
Q Consensus 15 ~~~l~tg~~d--~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d----~~v~~w~~~~~~~~~~~~~~ 88 (281)
+.+++.|+.+ +.+.+||..++++..+..+........++. .++..++.||.+ ..+.++|.... .+..+..+
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~-~W~~~~~~ 88 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKD-SWYSKLGP 88 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTT-EEEEEECC
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCC-eEEECCCC
Confidence 3466677754 578899988887765544332222222232 356677777755 56777776543 33333322
Q ss_pred cCCccceeEEEecCCCCeEEEEecC------CeEEEEeCCC
Q 023500 89 QGHAQDVKMVQWHPTMDVLFSCSYD------NTIKVWWAED 123 (281)
Q Consensus 89 ~~~~~~v~~v~~~p~~~~l~s~s~d------~~v~~w~~~~ 123 (281)
......-..+.+ ++.+++.|+.+ ..+.+||...
T Consensus 89 p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~ 127 (306)
T 3ii7_A 89 PTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRT 127 (306)
T ss_dssp SSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTT
T ss_pred CccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCC
Confidence 211111122222 45667777765 3577776654
No 304
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=93.44 E-value=2.7 Score=34.38 Aligned_cols=215 Identities=7% Similarity=-0.071 Sum_probs=113.0
Q ss_pred CCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCC-EEEEecCCCcEEEEEecCCCeeEEeEeecCCccceeEEEecC
Q 023500 24 DATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 102 (281)
Q Consensus 24 d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p 102 (281)
.+.|+..+..+.....+. . .......++|.+.+. ++++-...+.|..+++..... ...+.........+++.+
T Consensus 95 ~~~I~~i~~~~~~~~~~~--~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~---~~~~~~~~~~p~glavd~ 168 (386)
T 3v65_B 95 RIDIRQVLPHRSEYTLLL--N-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV---EEVVSTGLESPGGLAVDW 168 (386)
T ss_dssp BSCEEEECTTSCCCEEEE--C-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCE---EEEECSSCSCCCCEEEET
T ss_pred CccceeeccCCCcEEEEe--c-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCc---EEEEeCCCCCccEEEEEe
Confidence 356777777655433222 2 234567899998555 455556677888887754331 112222223456788887
Q ss_pred CC-CeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeC-C-CcEEEEeCCcccccc
Q 023500 103 TM-DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-D-LTIKIWGADITRMQS 179 (281)
Q Consensus 103 ~~-~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-d-~~i~~w~~~~~~~~~ 179 (281)
.+ .++++-...+.|.+.+.+... ...+.. .....+..++++|.+..|+.... . +.|..++.+.....
T Consensus 169 ~~g~lY~~d~~~~~I~~~~~dg~~------~~~l~~---~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~- 238 (386)
T 3v65_B 169 VHDKLYWTDSGTSRIEVANLDGAH------RKVLLW---QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR- 238 (386)
T ss_dssp TTTEEEEEETTTTEEEECBTTSCS------CEEEEC---SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-
T ss_pred CCCeEEEEcCCCCeEEEEeCCCCc------eEEeec---CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcE-
Confidence 54 455666666778776554321 111111 11245678999987665555443 3 56776665432110
Q ss_pred CCCCcccceeEEeecccCcceEEEEeCC--CceeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcC
Q 023500 180 GDGYASWRHLCTISGYHDRTIFSVHWSR--EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSP 257 (281)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 257 (281)
.+....-.....+.+++ +.++.+-...+.++.++.... ....+... .......+++.
T Consensus 239 -----------~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~------~~~~~~~~---~~~~P~giav~- 297 (386)
T 3v65_B 239 -----------IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS------HRKAVISQ---GLPHPFAITVF- 297 (386)
T ss_dssp -----------EEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC------SCEEEECS---SCSSEEEEEEE-
T ss_pred -----------EEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC------eeEEEEEC---CCCCceEEEEE-
Confidence 01001112345566664 334555556667777754321 11111111 12335667773
Q ss_pred CCCeeEEEeCCCCeEEEEE
Q 023500 258 GERRLLASASDDGMIKIWE 276 (281)
Q Consensus 258 ~~~~~~~s~~~Dg~v~iw~ 276 (281)
+..++.+....+.|..++
T Consensus 298 -~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 298 -EDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp -TTEEEEEETTTTEEEEEE
T ss_pred -CCEEEEeeCCCCeEEEEE
Confidence 235677777777777776
No 305
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=93.41 E-value=1.3 Score=35.84 Aligned_cols=107 Identities=16% Similarity=0.127 Sum_probs=57.5
Q ss_pred CeeEEEEcCCCCEEEEecCCCcEEEEEecCCCeeEEeEee---cCCccceeEEEecCC----CCeEEEEec---C----C
Q 023500 49 EVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVL---QGHAQDVKMVQWHPT----MDVLFSCSY---D----N 114 (281)
Q Consensus 49 ~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~---~~~~~~v~~v~~~p~----~~~l~s~s~---d----~ 114 (281)
.-..++|.|+|+++++- .++.|++++ ..+ . +.+..+ .........++++|+ +.++++-+. + +
T Consensus 30 ~P~~ia~~pdG~l~V~e-~~g~I~~~d-~~G-~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVTE-RPGRLVLIS-PSG-K-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp CEEEEEEEETTEEEEEE-TTTEEEEEC-SSC-E-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCeEEEEcCCCeEEEEe-CCCEEEEEe-CCC-c-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 34689999999866654 458888776 222 2 222221 122345788999997 444454442 3 4
Q ss_pred eEEEEeCCCCC--CCCceeeee-eeeccCCccccEEEEEEccCCCEEEEee
Q 023500 115 TIKVWWAEDTD--SDNWHCVQT-ISESNNGHSSTIWALSFNAKGDKLVSCS 162 (281)
Q Consensus 115 ~v~~w~~~~~~--~~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 162 (281)
.|..++..... ....+.+.. +. ....|. ...+.|.|++.+.++-+
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~-~~~~h~--~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIP-GAYIHN--GGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEE-CCSSCC--CCCEEECTTSCEEEECC
T ss_pred EEEEEEECCCCcCcCccEEEEEcCC-CCCCcC--CceEEECCCCcEEEEEC
Confidence 56666554321 001111111 11 112233 35689999998766643
No 306
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=93.18 E-value=2.5 Score=33.16 Aligned_cols=147 Identities=12% Similarity=0.131 Sum_probs=71.7
Q ss_pred CCCEEEEeeCC----CcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecC----C-----CcEEEEEecCCC
Q 023500 14 SGKLLATASFD----ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR----D-----KSVWIWEVMPGN 80 (281)
Q Consensus 14 ~~~~l~tg~~d----~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~----d-----~~v~~w~~~~~~ 80 (281)
++.+++.|+.+ ..+.+||..+.++..+..+.........+. .++..++.||. + ..+.++|+...
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~- 100 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCV--VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTN- 100 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCEEEETTEEEECCCEEEEETTTT-
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEE--ECCEEEEECCCcCCCCCCeecceEEEECCCCC-
Confidence 56788888742 368889988877665543322111212222 25666777775 2 35777776533
Q ss_pred eeEEeEeecCCccceeEEEecCCCCeEEEEecC-----CeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCC
Q 023500 81 EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYD-----NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG 155 (281)
Q Consensus 81 ~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d-----~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 155 (281)
.+..+..+......-..+.+ ++.+++.|+.+ ..+.++|.... .|..+..+.....+| .++.+ ++
T Consensus 101 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~----~~~~~--~~ 169 (308)
T 1zgk_A 101 QWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERD---EWHLVAPMLTRRIGV----GVAVL--NR 169 (308)
T ss_dssp EEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTT---EEEECCCCSSCCBSC----EEEEE--TT
T ss_pred eEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCC---eEeECCCCCccccce----EEEEE--CC
Confidence 33332222211111122222 45566666544 35666766432 344333322211122 12222 55
Q ss_pred CEEEEeeCC-----CcEEEEeCCc
Q 023500 156 DKLVSCSDD-----LTIKIWGADI 174 (281)
Q Consensus 156 ~~l~s~~~d-----~~i~~w~~~~ 174 (281)
..++.|+.+ ..+..||...
T Consensus 170 ~iyv~GG~~~~~~~~~~~~yd~~~ 193 (308)
T 1zgk_A 170 LLYAVGGFDGTNRLNSAECYYPER 193 (308)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTT
T ss_pred EEEEEeCCCCCCcCceEEEEeCCC
Confidence 666666644 3466777653
No 307
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=92.93 E-value=3.1 Score=33.67 Aligned_cols=156 Identities=8% Similarity=0.044 Sum_probs=87.5
Q ss_pred eEEEEcCCCCEEEEee------------CCCcEEEEecCC--CceeeeeeecC-----CCCCeeEEEEcC--CCC-EEEE
Q 023500 7 RSCAWSPSGKLLATAS------------FDATTCIWEDVG--GDYECVATLEG-----HENEVKSVSWNA--SGT-LLAT 64 (281)
Q Consensus 7 ~~~~~~~~~~~l~tg~------------~d~~i~lw~~~~--~~~~~~~~~~~-----h~~~v~~v~~~~--~~~-~l~s 64 (281)
-.+++.|+|..+++++ .+|.|.++|..+ .+...+. +.+ ....-..+.+.+ ++. +|+.
T Consensus 53 EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~-~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 53 EDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELE-IIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECE-EECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred ceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEE-ccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 4677888887766652 688999999763 2332232 222 223556777755 454 3433
Q ss_pred e--c-CCCcEEEEEecCCC-eeEEeEeecCC-ccceeEEEecCCCCeEEEEec---C------------CeEEEEeCCCC
Q 023500 65 C--G-RDKSVWIWEVMPGN-EFECVSVLQGH-AQDVKMVQWHPTMDVLFSCSY---D------------NTIKVWWAEDT 124 (281)
Q Consensus 65 ~--~-~d~~v~~w~~~~~~-~~~~~~~~~~~-~~~v~~v~~~p~~~~l~s~s~---d------------~~v~~w~~~~~ 124 (281)
+ + .+.+|-+|++.... ....+..+.+. -...+.+.+.|++..+++... | ..-++|.+...
T Consensus 132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~ 211 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN 211 (355)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT
T ss_pred EECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC
Confidence 3 2 25678888887543 33334444432 234578888898887776441 1 12233333221
Q ss_pred CCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEee-CCCcEEEEeCC
Q 023500 125 DSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS-DDLTIKIWGAD 173 (281)
Q Consensus 125 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~d~~i~~w~~~ 173 (281)
.. ..+.. .-...+.++|+|+++.|+.+. ..+.|..|+.+
T Consensus 212 ---~~---~~~~~----~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 212 ---DV---RVVAE----GFDFANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp ---CC---EEEEE----EESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred ---eE---EEeec----CCcccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 11 11111 113467899999998766654 56788888764
No 308
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=92.41 E-value=3.2 Score=33.65 Aligned_cols=103 Identities=15% Similarity=0.147 Sum_probs=59.3
Q ss_pred ceeEEEEcCCCCEEEEeeC-----------------CCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEE-Eec
Q 023500 5 TVRSCAWSPSGKLLATASF-----------------DATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLA-TCG 66 (281)
Q Consensus 5 ~i~~~~~~~~~~~l~tg~~-----------------d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~ 66 (281)
..+.+++.++|+++++... .+.+.-++. ++...+ .. .-..-+.++|+||++.|. +-+
T Consensus 166 ~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~--~~-~l~~pNGia~spDg~~lYvadt 240 (355)
T 3sre_A 166 SVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVV--AE-GFDFANGINISPDGKYVYIAEL 240 (355)
T ss_dssp SEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEE--EE-EESSEEEEEECTTSSEEEEEEG
T ss_pred CCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEe--ec-CCcccCcceECCCCCEEEEEeC
Confidence 4578889999998877541 133434443 222211 11 123457899999998765 445
Q ss_pred CCCcEEEEEecCCCeeEEeEeecCCccceeEEEecC-CCCeEEEEecC
Q 023500 67 RDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP-TMDVLFSCSYD 113 (281)
Q Consensus 67 ~d~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p-~~~~l~s~s~d 113 (281)
..+.|..|++.........+.+. -....-.++..+ ++++.+++..+
T Consensus 241 ~~~~I~~~~~~~~g~l~~~~~~~-~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 241 LAHKIHVYEKHANWTLTPLRVLS-FDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp GGTEEEEEEECTTSCEEEEEEEE-CSSEEEEEEECTTTCCEEEEEESC
T ss_pred CCCeEEEEEECCCCcEecCEEEe-CCCCCceEEEeCCCCcEEEEecCC
Confidence 67899999986443332223331 123345566677 47766665544
No 309
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=92.35 E-value=4.7 Score=34.30 Aligned_cols=159 Identities=13% Similarity=0.029 Sum_probs=87.3
Q ss_pred eEEEEcC-CCCEEEEeeCCCcEEEEecC-------CCce------------eeeeeecCCCCCeeEEEEcCCCCE-EEEe
Q 023500 7 RSCAWSP-SGKLLATASFDATTCIWEDV-------GGDY------------ECVATLEGHENEVKSVSWNASGTL-LATC 65 (281)
Q Consensus 7 ~~~~~~~-~~~~l~tg~~d~~i~lw~~~-------~~~~------------~~~~~~~~h~~~v~~v~~~~~~~~-l~s~ 65 (281)
..++++| ++.++++-..++.|..+|.. ++.. ..+... +....-+.++|+|+|+. .++-
T Consensus 250 ~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD 328 (496)
T 3kya_A 250 NGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGV 328 (496)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC-SSSSCCEEEEECTTSSEEEEEE
T ss_pred eEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEec-CCCCCceEEEEcCCCCEEEEEe
Confidence 5678899 45666676777889999876 4432 112222 12233468999999995 5555
Q ss_pred cCCCcEEEEEecCCC-ee---EEeEee---cCCc---------ccee-EEEec-------CCCCeEEEEecCCeEEEEeC
Q 023500 66 GRDKSVWIWEVMPGN-EF---ECVSVL---QGHA---------QDVK-MVQWH-------PTMDVLFSCSYDNTIKVWWA 121 (281)
Q Consensus 66 ~~d~~v~~w~~~~~~-~~---~~~~~~---~~~~---------~~v~-~v~~~-------p~~~~l~s~s~d~~v~~w~~ 121 (281)
...+.|+.++..... .. ....-. .+.. ..-. .+... +.++++++-+..+.|+.++.
T Consensus 329 ~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~ 408 (496)
T 3kya_A 329 INNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP 408 (496)
T ss_dssp TTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT
T ss_pred CCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC
Confidence 667788887654221 11 011110 1110 0112 33343 45667777777788888753
Q ss_pred CCCCCCCceeeeeeeec--------------------cCCccccEEEEEEccC-CCEEEEeeCCCcEEEEeCC
Q 023500 122 EDTDSDNWHCVQTISES--------------------NNGHSSTIWALSFNAK-GDKLVSCSDDLTIKIWGAD 173 (281)
Q Consensus 122 ~~~~~~~~~~~~~~~~~--------------------~~~h~~~v~~~~~~~~-~~~l~s~~~d~~i~~w~~~ 173 (281)
+. .+.++.-. ..+.-..+..|+++++ +.++++=.....|+.++.+
T Consensus 409 ~G-------~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~ 474 (496)
T 3kya_A 409 EG-------IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISME 474 (496)
T ss_dssp TC-------BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred CC-------CEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECC
Confidence 21 01111100 0112234678999986 6555555566788887654
No 310
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=92.13 E-value=4.9 Score=34.97 Aligned_cols=53 Identities=11% Similarity=0.006 Sum_probs=31.7
Q ss_pred CCcEEEEEecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEeCCCC
Q 023500 68 DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDT 124 (281)
Q Consensus 68 d~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~ 124 (281)
++.|..||+..++....... . . .+..-.....+.+++.++.|+.++.+|.++.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~-~--~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG 517 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKE-H--L-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSG 517 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEE-S--S-CCCSCCEEETTTEEEEECTTSEEEEEETTTC
T ss_pred cceEEEEECCCCCEEEEecC-C--C-CCcccceEeCCCEEEEECCCCcEEEEECCCC
Confidence 57788888877664322221 1 1 1111111123567888999999999988765
No 311
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=92.13 E-value=2.7 Score=33.63 Aligned_cols=51 Identities=6% Similarity=-0.018 Sum_probs=28.0
Q ss_pred CcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCC------CcEEEEEe
Q 023500 25 ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRD------KSVWIWEV 76 (281)
Q Consensus 25 ~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d------~~v~~w~~ 76 (281)
+.+.+||..+..+..+..+......-.++.. -++..++.||.+ ..+..+++
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEe
Confidence 4688899888877666544321111122222 255666666642 35666765
No 312
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=91.47 E-value=6.5 Score=34.10 Aligned_cols=65 Identities=5% Similarity=0.006 Sum_probs=38.5
Q ss_pred CCEEEEeeCCCcEEEEecCCCceeeeeeecCCCC--CeeEEEEcC--CCCEEEEecC------CCcEEEEEecCCCee
Q 023500 15 GKLLATASFDATTCIWEDVGGDYECVATLEGHEN--EVKSVSWNA--SGTLLATCGR------DKSVWIWEVMPGNEF 82 (281)
Q Consensus 15 ~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~--~v~~v~~~~--~~~~l~s~~~------d~~v~~w~~~~~~~~ 82 (281)
+..+..++.|+.+..+|..+++......+..+.. .+.+ +| .+..++.++. ++.|..+|..+++..
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~---~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 189 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQ---APFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELK 189 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCS---CCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceecc---CCEEECCEEEEEecCCccCCCCEEEEEECCCCcEE
Confidence 4566677889999999988876544333332211 1211 12 1334444433 789999998877653
No 313
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=91.42 E-value=5.1 Score=33.74 Aligned_cols=111 Identities=14% Similarity=0.086 Sum_probs=58.3
Q ss_pred eEEEEcCCCC-EEEEecCCCcEEEEEecCCCeeEEeEeec---------CCccceeEEEecCC----CCeEEEEecC---
Q 023500 51 KSVSWNASGT-LLATCGRDKSVWIWEVMPGNEFECVSVLQ---------GHAQDVKMVQWHPT----MDVLFSCSYD--- 113 (281)
Q Consensus 51 ~~v~~~~~~~-~l~s~~~d~~v~~w~~~~~~~~~~~~~~~---------~~~~~v~~v~~~p~----~~~l~s~s~d--- 113 (281)
+.++|.|+|. +|+.+...|.|++++.........+..+. ........++++|+ +.++++-+.+
T Consensus 17 ~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~~ 96 (463)
T 2wg3_C 17 VGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQER 96 (463)
T ss_dssp EEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCCS
T ss_pred eEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCCC
Confidence 6889999986 45555677888888632111001111111 11345678999997 3444443321
Q ss_pred ---------CeEEEEeCCCCC-----CCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeC
Q 023500 114 ---------NTIKVWWAEDTD-----SDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 163 (281)
Q Consensus 114 ---------~~v~~w~~~~~~-----~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 163 (281)
..|.-|.+.... ....+.+..+......|. -..|.|.||+.+.++.+.
T Consensus 97 ~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~--g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 97 WAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHL--GGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp SCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSC--EEEEEECTTSCEEEEECC
T ss_pred cccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCccc--CCcEeECCCCcEEEEeCC
Confidence 133334443211 112233333332233464 467999999986666543
No 314
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=91.25 E-value=4.4 Score=31.76 Aligned_cols=150 Identities=9% Similarity=0.106 Sum_probs=72.2
Q ss_pred EcCCCCEEEEeeC-----C------CcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCC--------CcE
Q 023500 11 WSPSGKLLATASF-----D------ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRD--------KSV 71 (281)
Q Consensus 11 ~~~~~~~l~tg~~-----d------~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d--------~~v 71 (281)
...++++++.|+. . ..+..||..++++..+..+.........+.+ ++..++.||.+ ..+
T Consensus 42 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~ 119 (315)
T 4asc_A 42 VTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSV 119 (315)
T ss_dssp ECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCE
T ss_pred EEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceE
Confidence 3457788888884 1 1266788877766544433211111122222 56666777732 357
Q ss_pred EEEEecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEec-C-----CeEEEEeCCCCCCCCceeeeeeeeccCCcccc
Q 023500 72 WIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY-D-----NTIKVWWAEDTDSDNWHCVQTISESNNGHSST 145 (281)
Q Consensus 72 ~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~-d-----~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~ 145 (281)
.++|.... .+..+..+......-..+. .++.+++.|+. + ..+.++|+... .|..+..+......|.
T Consensus 120 ~~~d~~~~-~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~-- 191 (315)
T 4asc_A 120 MCYDRLSF-KWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKF---EWKELAPMQTARSLFG-- 191 (315)
T ss_dssp EEEETTTT-EEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTT---EEEECCCCSSCCBSCE--
T ss_pred EEECCCCC-cEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCC---eEEECCCCCCchhceE--
Confidence 77777543 3333322221111111111 34556677765 2 35677766543 3544433322111221
Q ss_pred EEEEEEccCCCEEEEeeCCC-----cEEEEeCCc
Q 023500 146 IWALSFNAKGDKLVSCSDDL-----TIKIWGADI 174 (281)
Q Consensus 146 v~~~~~~~~~~~l~s~~~d~-----~i~~w~~~~ 174 (281)
++.+ ++..++.|+.++ .+.+||.+.
T Consensus 192 --~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 192 --ATVH--DGRIIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp --EEEE--TTEEEEEEEECSSSEEEEEEEEETTT
T ss_pred --EEEE--CCEEEEEeccCCCCccceEEEEECCC
Confidence 2222 556666666543 356666653
No 315
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=90.78 E-value=6.5 Score=33.11 Aligned_cols=108 Identities=13% Similarity=0.072 Sum_probs=59.2
Q ss_pred eeEEEEcCCCC--EEEEeeCCCcEEEEecCCCc-eeeeeeec---------CCCCCeeEEEEcCC----CCEEEEecC--
Q 023500 6 VRSCAWSPSGK--LLATASFDATTCIWEDVGGD-YECVATLE---------GHENEVKSVSWNAS----GTLLATCGR-- 67 (281)
Q Consensus 6 i~~~~~~~~~~--~l~tg~~d~~i~lw~~~~~~-~~~~~~~~---------~h~~~v~~v~~~~~----~~~l~s~~~-- 67 (281)
-+.++|.|+|+ +|+ +...|.|++++..... ...+..+. +.......|+|+|+ +.+.++-+.
T Consensus 16 P~~~a~~pdG~~rl~V-~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFI-LEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp EEEEECCSSSSCCEEE-EETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred ceEEEECCCCCeEEEE-EeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 46789999996 555 4678899998754321 11112111 12456789999996 444444321
Q ss_pred C----------CcEEEEEecCC--C-----eeEEeEeec--CCccceeEEEecCCCCeEEEEecCC
Q 023500 68 D----------KSVWIWEVMPG--N-----EFECVSVLQ--GHAQDVKMVQWHPTMDVLFSCSYDN 114 (281)
Q Consensus 68 d----------~~v~~w~~~~~--~-----~~~~~~~~~--~~~~~v~~v~~~p~~~~l~s~s~d~ 114 (281)
+ ..|.-|.+... . +.+.+..+. ........+.|.|++.++++.+..+
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1 12333554321 1 112222211 2223467899999998888766543
No 316
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=90.74 E-value=8 Score=33.82 Aligned_cols=64 Identities=6% Similarity=0.073 Sum_probs=36.8
Q ss_pred EEEeeCCCcEEEEecCCCceeeeeeecCCCC--CeeEEEEcCCCCEEEEec------CCCcEEEEEecCCCee
Q 023500 18 LATASFDATTCIWEDVGGDYECVATLEGHEN--EVKSVSWNASGTLLATCG------RDKSVWIWEVMPGNEF 82 (281)
Q Consensus 18 l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~--~v~~v~~~~~~~~l~s~~------~d~~v~~w~~~~~~~~ 82 (281)
++.++.|+.+..+|..+++......+..+.. .+.+--.-.++ .++.++ .++.|..+|..+++..
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~ 195 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKD-KVIIGSSGAELGVRGYLTAYDVKTGEQV 195 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETT-EEEECCBCGGGTCCCEEEEEETTTCCEE
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECC-EEEEEecccccCCCCeEEEEECCCCcEE
Confidence 6678889999999988887543333322111 12110000134 444443 4789999998877653
No 317
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=90.50 E-value=8.2 Score=33.57 Aligned_cols=56 Identities=11% Similarity=0.142 Sum_probs=36.4
Q ss_pred CcEEEEecCCCceeeeeeecCCC--------CCeeEEEEc-CCCC---EEEEecCCCcEEEEEecCCCe
Q 023500 25 ATTCIWEDVGGDYECVATLEGHE--------NEVKSVSWN-ASGT---LLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 25 ~~i~lw~~~~~~~~~~~~~~~h~--------~~v~~v~~~-~~~~---~l~s~~~d~~v~~w~~~~~~~ 81 (281)
+.|..+|..+++.........|. .++ -+... .+|+ .++.++.++.+.++|..+++.
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~-l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 358 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELV-LFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKL 358 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCE-EEEEECSSSCEEEEEEEECTTSEEEEEETTTCCE
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcE-EEeeecCCCCEEEEEEEECCCceEEEEECCCCCE
Confidence 57888998888765444444443 122 12222 4674 678899999999999876654
No 318
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=89.92 E-value=7.2 Score=32.02 Aligned_cols=220 Identities=9% Similarity=-0.053 Sum_probs=114.0
Q ss_pred CCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCE-EEEecCCCcEEEEEecCCCe-eEEeEeecCCccceeEEEec
Q 023500 24 DATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL-LATCGRDKSVWIWEVMPGNE-FECVSVLQGHAQDVKMVQWH 101 (281)
Q Consensus 24 d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~-l~s~~~d~~v~~w~~~~~~~-~~~~~~~~~~~~~v~~v~~~ 101 (281)
.+.|+..+........+ ...-..+..++|++.... ..+-...+.|..+++..... ................+++.
T Consensus 91 ~~~I~~i~l~~~~~~~~---~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD 167 (400)
T 3p5b_L 91 RHEVRKMTLDRSEYTSL---IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 167 (400)
T ss_dssp TTEEEEECTTSCSCEEE---ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEE
T ss_pred cceeEEEccCCcceeEe---ccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEE
Confidence 46677777765543322 234466789999986554 45555677888887753210 00112222233456788888
Q ss_pred C-CCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeC--CCcEEEEeCCccccc
Q 023500 102 P-TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD--DLTIKIWGADITRMQ 178 (281)
Q Consensus 102 p-~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~--d~~i~~w~~~~~~~~ 178 (281)
+ .++++++-...+.|.+.+.+... ...+.. ..-..+..++++|.+..|+.... .+.|...+++.....
T Consensus 168 ~~~~~lY~~d~~~~~I~~~~~~g~~------~~~l~~---~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~ 238 (400)
T 3p5b_L 168 WIHSNIYWTDSVLGTVSVADTKGVK------RKTLFR---ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 238 (400)
T ss_dssp TTTTEEEEEETTTTEEEEECTTTCS------EEEEEE---CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCE
T ss_pred ecCCceEEEECCCCeEEEEeCCCCc------eEEEEe---CCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccE
Confidence 7 45566676677888887665321 111111 11234678999986665554442 367777766532111
Q ss_pred cCCCCcccceeEEeecccCcceEEEEeCCC--ceeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEc
Q 023500 179 SGDGYASWRHLCTISGYHDRTIFSVHWSRE--GIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWS 256 (281)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 256 (281)
.+....-.....+.+++. .++.+-.....++.++.... ....+.. ....-.....++..
T Consensus 239 ------------~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~------~~~~~~~-~~~~l~~P~gl~v~ 299 (400)
T 3p5b_L 239 ------------SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG------NRKTILE-DEKRLAHPFSLAVF 299 (400)
T ss_dssp ------------EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC------CCEEEEE-CSSTTSSEEEEEEE
T ss_pred ------------EEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC------ccEEEEe-CCCCCCCCEEEEEe
Confidence 000001123455666642 34455555667777755331 1111211 11112234456663
Q ss_pred CCCCeeEEEeCCCCeEEEEE
Q 023500 257 PGERRLLASASDDGMIKIWE 276 (281)
Q Consensus 257 ~~~~~~~~s~~~Dg~v~iw~ 276 (281)
+..++.+....+.|..++
T Consensus 300 --~~~lywtd~~~~~V~~~~ 317 (400)
T 3p5b_L 300 --EDKVFWTDIINEAIFSAN 317 (400)
T ss_dssp --TTEEEEEESSSCSEEEEE
T ss_pred --CCEEEEecCCCCeEEEEE
Confidence 335666766667777666
No 319
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=89.56 E-value=6.5 Score=30.98 Aligned_cols=220 Identities=8% Similarity=-0.044 Sum_probs=115.7
Q ss_pred CcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCC-EEEEecCCCcEEEEEecCCCe-eEEeEeecCCccceeEEEecC
Q 023500 25 ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVMPGNE-FECVSVLQGHAQDVKMVQWHP 102 (281)
Q Consensus 25 ~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~v~~w~~~~~~~-~~~~~~~~~~~~~v~~v~~~p 102 (281)
+.|+..+..+.....+ +. .-.....++|++.+. .+++-..++.|..+++..... ......+...-.....+++.+
T Consensus 10 ~~I~~i~~~~~~~~~~--~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~ 86 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSL--IP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 86 (316)
T ss_dssp SSEEEEETTSCCCEEE--EC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEET
T ss_pred CeEEEEECCCcceEeh--hc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEee
Confidence 5578878766543322 22 335567999998655 455656678888888753100 011112222223457888886
Q ss_pred C-CCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeCC--CcEEEEeCCcccccc
Q 023500 103 T-MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDD--LTIKIWGADITRMQS 179 (281)
Q Consensus 103 ~-~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d--~~i~~w~~~~~~~~~ 179 (281)
. ++++++-...+.|.+.+.+... ...+.. ..-..+..++++|.+..|+..... +.|..++.+....
T Consensus 87 ~~~~ly~~d~~~~~I~~~~~~g~~------~~~~~~---~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~-- 155 (316)
T 1ijq_A 87 IHSNIYWTDSVLGTVSVADTKGVK------RKTLFR---ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-- 155 (316)
T ss_dssp TTTEEEEEETTTTEEEEEETTSSS------EEEEEE---CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE--
T ss_pred cCCeEEEEECCCCEEEEEeCCCCc------eEEEEE---CCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe--
Confidence 4 4456666677889888765321 111211 112356789999866655544432 5677776543211
Q ss_pred CCCCcccceeEEeecccCcceEEEEeCCC--ceeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcC
Q 023500 180 GDGYASWRHLCTISGYHDRTIFSVHWSRE--GIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSP 257 (281)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 257 (281)
+ .+....-.....+.++++ .++.+-...+.+..++.... ....+.. ....-.....+++..
T Consensus 156 -------~---~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~------~~~~~~~-~~~~~~~P~giav~~ 218 (316)
T 1ijq_A 156 -------Y---SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG------NRKTILE-DEKRLAHPFSLAVFE 218 (316)
T ss_dssp -------E---EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC------SCEEEEE-CTTTTSSEEEEEEET
T ss_pred -------E---EEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC------ceEEEee-cCCccCCcEEEEEEC
Confidence 0 010001123455666643 34555556667777765421 1111211 111122356677753
Q ss_pred CCCeeEEEeCCCCeEEEEEc
Q 023500 258 GERRLLASASDDGMIKIWEL 277 (281)
Q Consensus 258 ~~~~~~~s~~~Dg~v~iw~~ 277 (281)
..++.+....+.|..++.
T Consensus 219 --~~ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 219 --DKVFWTDIINEAIFSANR 236 (316)
T ss_dssp --TEEEEEETTTTEEEEEET
T ss_pred --CEEEEEECCCCeEEEEeC
Confidence 457777777778877774
No 320
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=89.47 E-value=3.5 Score=33.27 Aligned_cols=108 Identities=18% Similarity=0.160 Sum_probs=53.4
Q ss_pred eeEEEEcCCCC-EEEEecCCCcEEEEEecCCCeeEEeE----eecCCccceeEEEecCC----CCeEEEEec-------C
Q 023500 50 VKSVSWNASGT-LLATCGRDKSVWIWEVMPGNEFECVS----VLQGHAQDVKMVQWHPT----MDVLFSCSY-------D 113 (281)
Q Consensus 50 v~~v~~~~~~~-~l~s~~~d~~v~~w~~~~~~~~~~~~----~~~~~~~~v~~v~~~p~----~~~l~s~s~-------d 113 (281)
-+.++|.|+|+ ++++ ...+.|++++. .+.....+. +..........++++|+ +.++++-+. .
T Consensus 20 P~~i~~~pdG~~l~V~-e~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 20 PWALAFLPDNHGMLIT-LRGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp EEEEEECSTTCCEEEE-ETTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred cEEEEEcCCCCEEEEE-eCCceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 46899999999 5555 45688888863 221100111 11112335678999996 444444333 2
Q ss_pred CeEEEEeCCCCCC--CCceeee-eeee-ccCCccccEEEEEEccCCCEEEEe
Q 023500 114 NTIKVWWAEDTDS--DNWHCVQ-TISE-SNNGHSSTIWALSFNAKGDKLVSC 161 (281)
Q Consensus 114 ~~v~~w~~~~~~~--~~~~~~~-~~~~-~~~~h~~~v~~~~~~~~~~~l~s~ 161 (281)
..|..++...... ...+.+. .+.. ....|. ...+.|.|++.+.++-
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~--~~~l~~~pdG~Lyv~~ 147 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHF--GGRLVFDGKGYLFIAL 147 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCC--CCCEEECSSSEEEEEE
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCccc--CccEEECCCCcEEEEE
Confidence 2454444432211 1111111 1110 011232 2469999999655553
No 321
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=89.40 E-value=10 Score=33.10 Aligned_cols=72 Identities=17% Similarity=0.169 Sum_probs=45.2
Q ss_pred EEEcCCCCEEEEeeCC----------------CcEEEEecCCCceeeeeeecCCCC--------CeeEEEEc-CCC---C
Q 023500 9 CAWSPSGKLLATASFD----------------ATTCIWEDVGGDYECVATLEGHEN--------EVKSVSWN-ASG---T 60 (281)
Q Consensus 9 ~~~~~~~~~l~tg~~d----------------~~i~lw~~~~~~~~~~~~~~~h~~--------~v~~v~~~-~~~---~ 60 (281)
.++.++..++..+..+ +.|..+|..+++.........|.. ++ -+... .+| .
T Consensus 246 ~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~-l~d~~~~~G~~~~ 324 (599)
T 1w6s_A 246 YAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMM-LSEQKDKDGKARK 324 (599)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEECTTSCEEE
T ss_pred eeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccE-EEeccccCCcEEE
Confidence 4566766666555544 378888988887654444444421 12 12232 467 4
Q ss_pred EEEEecCCCcEEEEEecCCCe
Q 023500 61 LLATCGRDKSVWIWEVMPGNE 81 (281)
Q Consensus 61 ~l~s~~~d~~v~~w~~~~~~~ 81 (281)
.++.++.++.+.+.|..+++.
T Consensus 325 ~v~~~~~~G~l~~lD~~tG~~ 345 (599)
T 1w6s_A 325 LLTHPDRNGIVYTLDRTDGAL 345 (599)
T ss_dssp EEEEECTTSEEEEEETTTCCE
T ss_pred EEEEECCCcEEEEEECCCCCE
Confidence 677788999999999877654
No 322
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=88.72 E-value=17 Score=34.66 Aligned_cols=224 Identities=10% Similarity=0.037 Sum_probs=109.7
Q ss_pred EEEEecCCCceeeeeeecCCCCCeeEEE---EcCC-CCEEEEec----------CCCcEEEEEecCCCeeEEeEeecCCc
Q 023500 27 TCIWEDVGGDYECVATLEGHENEVKSVS---WNAS-GTLLATCG----------RDKSVWIWEVMPGNEFECVSVLQGHA 92 (281)
Q Consensus 27 i~lw~~~~~~~~~~~~~~~h~~~v~~v~---~~~~-~~~l~s~~----------~d~~v~~w~~~~~~~~~~~~~~~~~~ 92 (281)
++|.|..+.+......+.. .+.+.|++ |..+ ..+|+.|- ..|.|.++++.. ...+.+.... ..
T Consensus 809 i~lidp~t~~~i~~~~l~~-nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~-~kL~lv~~~~-v~ 885 (1158)
T 3ei3_A 809 LLIIDQHTFEVLHAHQFLQ-NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSD-GKLQTVAEKE-VK 885 (1158)
T ss_dssp EEEEETTTCCEEEEEECCT-TEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEET-TEEEEEEEEE-ES
T ss_pred EEEEeCCCCeEEEEEeCCC-CcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEEC-CEEEEEEEEE-cC
Confidence 5666665544322333332 34444544 3332 35666553 247899999863 3333332221 23
Q ss_pred cceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeCCCcEEEEeC
Q 023500 93 QDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGA 172 (281)
Q Consensus 93 ~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~ 172 (281)
+.+++++-- .+ .+++| -..+|++|++..... ++ ..... +.. +..+.....+++++.|+.-..+.+...
T Consensus 886 g~v~al~~~-~g-~Lla~-ig~~l~vy~l~~~~~-----L~-~~~~~--~~~-i~~~~l~~~~~~I~vgD~~~Sv~~~~y 953 (1158)
T 3ei3_A 886 GAVYSMVEF-NG-KLLAS-INSTVRLYEWTTEKE-----LR-TECNH--YNN-IMALYLKTKGDFILVGDLMRSVLLLAY 953 (1158)
T ss_dssp SCEEEEEEE-TT-EEEEE-ETTEEEEEEECTTSC-----EE-EEEEE--CCC-SCEEEEEEETTEEEEEESSBCEEEEEE
T ss_pred CcCEEEeee-CC-EEEEE-cCCEEEEEECCCCce-----EE-EEeec--ccc-EEEEEEeccCCEEEEEEhhheEEEEEE
Confidence 456665432 23 44443 458999998865321 11 11100 111 222333334668888876666766532
Q ss_pred CccccccCCCCcccceeEEeecccCcceEEEEeCCCceeeecCCCCcEEEEecccCCCcCCccceeeeeeccCC-CCCee
Q 023500 173 DITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAH-DMDVN 251 (281)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~ 251 (281)
+... . +.......+....+.++.+-.+..++.+-.++.+.++........+.... .+......| ...|+
T Consensus 954 ~~~~-------~--~L~~~a~D~~~~~vta~~~ld~~t~l~aD~~gNl~vl~~~~~~~~~~~~~-~L~~~~~fhlG~~vt 1023 (1158)
T 3ei3_A 954 KPME-------G--NFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQ-HLQEVGLFHLGEFVN 1023 (1158)
T ss_dssp ETTT-------T--EEEEEEECCSCBCEEEEEEEETTEEEEEETTSEEEEEEECTTCCSTTGGG-BEEEEEEEECSSCEE
T ss_pred EcCC-------C--eEEEEEeecccccEEEEEEEccCcEEEEcCCCcEEEEecCCCCCCccccc-eeeeEEEEeCCCcEe
Confidence 2110 0 11122223456777787776667777777888888876654322211111 111111122 34466
Q ss_pred EEE---EcCCC--------CeeEEEeCCCCeEEEE
Q 023500 252 SVQ---WSPGE--------RRLLASASDDGMIKIW 275 (281)
Q Consensus 252 ~~~---~~~~~--------~~~~~s~~~Dg~v~iw 275 (281)
++. +.+.+ ...++-++.+|.|-+.
T Consensus 1024 ~~~~~sl~~~~~~~~~~~~~~~il~~T~~GsIg~l 1058 (1158)
T 3ei3_A 1024 VFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLV 1058 (1158)
T ss_dssp EEEECCSCCC-------CEEEEEEEEETTSCEEEE
T ss_pred eEEeeeeecCCCccccccccceEEEEecCCEEEEE
Confidence 664 33322 2335567778887554
No 323
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=88.67 E-value=12 Score=32.86 Aligned_cols=157 Identities=9% Similarity=-0.038 Sum_probs=85.9
Q ss_pred ceeEEEEcCCCCE-EEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCC-EEEEecCCCcEEEEEecCCCee
Q 023500 5 TVRSCAWSPSGKL-LATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVMPGNEF 82 (281)
Q Consensus 5 ~i~~~~~~~~~~~-l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~v~~w~~~~~~~~ 82 (281)
....++|++.+.. +.+=...+.|..++..+.... ...+..--.....+++.+.+. +.++-...+.|.+.++.....
T Consensus 41 ~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~-~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~- 118 (619)
T 3s94_A 41 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV-QNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR- 118 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEEC-----C-EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-
T ss_pred ceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCce-EEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE-
Confidence 4567888886554 444344566777776544211 112222224567899998555 455666778898888753321
Q ss_pred EEeEeecCCccceeEEEecCCCCeEEEEec--CCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEE
Q 023500 83 ECVSVLQGHAQDVKMVQWHPTMDVLFSCSY--DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 160 (281)
Q Consensus 83 ~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~--d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 160 (281)
. ......-..-..+++.|....++.+.. .+.|...+++... . ..+.. ..-..+..+++++++..|+.
T Consensus 119 ~--~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~---~---~~l~~---~~~~~P~Glald~~~~~LY~ 187 (619)
T 3s94_A 119 K--VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS---R---FIIIN---SEIYWPNGLTLDYEEQKLYW 187 (619)
T ss_dssp E--EEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCS---C---EEEEC---SSCSSEEEEEEETTTTEEEE
T ss_pred E--EEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCc---e---EEEEe---CCCCCCcEEEEEccCCEEEE
Confidence 1 112233344678899997665554443 2455544443221 1 11111 11245688999987666655
Q ss_pred ee-CCCcEEEEeCCc
Q 023500 161 CS-DDLTIKIWGADI 174 (281)
Q Consensus 161 ~~-~d~~i~~w~~~~ 174 (281)
+. ..+.|..++.+.
T Consensus 188 aD~~~~~I~~~~~dG 202 (619)
T 3s94_A 188 ADAKLNFIHKSNLDG 202 (619)
T ss_dssp EETTTCCEEEESSSC
T ss_pred EeCCCCeEEEecCCC
Confidence 54 456788887764
No 324
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=88.09 E-value=8.1 Score=30.22 Aligned_cols=143 Identities=8% Similarity=0.119 Sum_probs=67.5
Q ss_pred EEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecC-----C--C----cEEEEEecCCCeeEEe
Q 023500 17 LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR-----D--K----SVWIWEVMPGNEFECV 85 (281)
Q Consensus 17 ~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-----d--~----~v~~w~~~~~~~~~~~ 85 (281)
+++.|+ ..+..||+.++++.. ..+..............++..++.||. . . .+..+|.... .+..+
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~-~W~~~ 82 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDS-EWLGM 82 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTT-EEEEC
T ss_pred EEEEcC--CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCC-eEEEC
Confidence 455666 568999998887653 333222122222233457777777773 1 1 2556665432 33322
Q ss_pred EeecCCccceeEEEecCCCCeEEEEecC--------CeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCE
Q 023500 86 SVLQGHAQDVKMVQWHPTMDVLFSCSYD--------NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDK 157 (281)
Q Consensus 86 ~~~~~~~~~v~~v~~~p~~~~l~s~s~d--------~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 157 (281)
..+......-..+.+ ++.+++.|+.+ ..+.++|.... .|+.+..+.....+|. ++. .++..
T Consensus 83 ~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~---~W~~~~~~p~~r~~~~----~~~--~~~~i 151 (315)
T 4asc_A 83 PPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSF---KWGESDPLPYVVYGHT----VLS--HMDLV 151 (315)
T ss_dssp CCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTT---EEEECCCCSSCCBSCE----EEE--ETTEE
T ss_pred CCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCC---cEeECCCCCCccccee----EEE--ECCEE
Confidence 222111111111222 45566666642 35677766542 3544433322111221 122 34556
Q ss_pred EEEeeC-C-----CcEEEEeCCc
Q 023500 158 LVSCSD-D-----LTIKIWGADI 174 (281)
Q Consensus 158 l~s~~~-d-----~~i~~w~~~~ 174 (281)
++.|+. + ..+..||...
T Consensus 152 yv~GG~~~~~~~~~~~~~yd~~~ 174 (315)
T 4asc_A 152 YVIGGKGSDRKCLNKMCVYDPKK 174 (315)
T ss_dssp EEECCBCTTSCBCCCEEEEETTT
T ss_pred EEEeCCCCCCcccceEEEEeCCC
Confidence 666665 2 3566777653
No 325
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=87.90 E-value=14 Score=32.58 Aligned_cols=155 Identities=9% Similarity=-0.002 Sum_probs=90.3
Q ss_pred ceeEEEEcCCC-CEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCE-EEEecCCCcEEEEEecCCCee
Q 023500 5 TVRSCAWSPSG-KLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL-LATCGRDKSVWIWEVMPGNEF 82 (281)
Q Consensus 5 ~i~~~~~~~~~-~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~-l~s~~~d~~v~~w~~~~~~~~ 82 (281)
.+..++|++.+ .++.+-..++.|..++..+...+.+. ..--.....+++.+.+.. .++-...+.|.+.++.....
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~--~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~- 114 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVV--EFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR- 114 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE--CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC-
T ss_pred ceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEE--eCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE-
Confidence 45688999855 45556566788888877654432222 211234568888876554 45656677888888753321
Q ss_pred EEeEeecCCccceeEEEecCCCCeEEEEec--CCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEE
Q 023500 83 ECVSVLQGHAQDVKMVQWHPTMDVLFSCSY--DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 160 (281)
Q Consensus 83 ~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~--d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 160 (281)
.. .....-..-+.+++.|....++.+.. .+.|...+++... ...+.. .-..+..+++++++..|+.
T Consensus 115 ~~--l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~------~~~l~~----~~~~P~GlalD~~~~~LY~ 182 (628)
T 4a0p_A 115 QV--LVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE------RTTLVP----NVGRANGLTIDYAKRRLYW 182 (628)
T ss_dssp EE--EECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS------CEEEEC----SCSSEEEEEEETTTTEEEE
T ss_pred EE--EEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc------eEEEEC----CCCCcceEEEccccCEEEE
Confidence 11 11223344689999996555544443 4566655554332 111111 1245678999997666665
Q ss_pred ee-CCCcEEEEeCCc
Q 023500 161 CS-DDLTIKIWGADI 174 (281)
Q Consensus 161 ~~-~d~~i~~w~~~~ 174 (281)
+. ..+.|..++.+.
T Consensus 183 aD~~~~~I~~~d~dG 197 (628)
T 4a0p_A 183 TDLDTNLIESSNMLG 197 (628)
T ss_dssp EETTTTEEEEEETTS
T ss_pred EECCCCEEEEEcCCC
Confidence 54 456788887653
No 326
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=87.54 E-value=16 Score=33.12 Aligned_cols=220 Identities=9% Similarity=-0.049 Sum_probs=111.1
Q ss_pred CCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCC-EEEEecCCCcEEEEEecCCCe-eEEeEeecCCccceeEEEec
Q 023500 24 DATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVMPGNE-FECVSVLQGHAQDVKMVQWH 101 (281)
Q Consensus 24 d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~v~~w~~~~~~~-~~~~~~~~~~~~~v~~v~~~ 101 (281)
...|+..+........ +......+..++|.+... ++++-...+.|+.+++..... ......+.........|++.
T Consensus 403 ~~~Ir~i~l~~~~~~~---l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD 479 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTS---LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 479 (791)
T ss_dssp BSSEEEECTTSCCCEE---EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEE
T ss_pred ccceeEeeccCCccee---eecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeee
Confidence 4556666665444322 222345677899998544 555666677888888753211 01122233233456788888
Q ss_pred CCC-CeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEeeC--CCcEEEEeCCccccc
Q 023500 102 PTM-DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD--DLTIKIWGADITRMQ 178 (281)
Q Consensus 102 p~~-~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~--d~~i~~w~~~~~~~~ 178 (281)
+.+ +++++-...+.|.+.+++... ...+.. ..-..+..|+++|....|+.... .+.|...+++.....
T Consensus 480 ~~~~~LY~tD~~~~~I~v~~ldG~~------~~~l~~---~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~ 550 (791)
T 3m0c_C 480 WIHSNIYWTDSVLGTVSVADTKGVK------RKTLFR---ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 550 (791)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSSS------EEEEEE---CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE
T ss_pred ecCCcEEEEecCCCeEEEEeCCCCe------EEEEEe---CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceE
Confidence 766 456666677888888765432 111211 11234778999987655555442 256777766532211
Q ss_pred cCCCCcccceeEEeecccCcceEEEEeCC--CceeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEc
Q 023500 179 SGDGYASWRHLCTISGYHDRTIFSVHWSR--EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWS 256 (281)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 256 (281)
.+....-.....|.+++ +.++.+-.....|+.++.... ....+... ...-....+|++.
T Consensus 551 ------------~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~------~~~~v~~~-~~~l~~P~glav~ 611 (791)
T 3m0c_C 551 ------------SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG------NRKTILED-EKRLAHPFSLAVF 611 (791)
T ss_dssp ------------EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC------SCEEEEEC-TTTTSSEEEEEEE
T ss_pred ------------EEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCC------ceEEEecC-CCccCCCCEEEEe
Confidence 11111112344555553 234444445556666655322 11122211 1111223456654
Q ss_pred CCCCeeEEEeCCCCeEEEEE
Q 023500 257 PGERRLLASASDDGMIKIWE 276 (281)
Q Consensus 257 ~~~~~~~~s~~~Dg~v~iw~ 276 (281)
. .+++.+-...+.|...+
T Consensus 612 ~--~~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 612 E--DKVFWTDIINEAIFSAN 629 (791)
T ss_dssp T--TEEEEEETTTTEEEEEE
T ss_pred C--CEEEEEECCCCEEEEEe
Confidence 3 35676766666666655
No 327
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=85.73 E-value=11 Score=29.44 Aligned_cols=150 Identities=8% Similarity=0.133 Sum_probs=70.0
Q ss_pred EcCCCCEEEEeeC----CC-------cEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCC-------CcEE
Q 023500 11 WSPSGKLLATASF----DA-------TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRD-------KSVW 72 (281)
Q Consensus 11 ~~~~~~~l~tg~~----d~-------~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d-------~~v~ 72 (281)
...++++++.|+. ++ .+..||..+.++..+..+.........+.+ ++..++.||.+ ..+.
T Consensus 53 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~ 130 (318)
T 2woz_A 53 VTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVL 130 (318)
T ss_dssp ECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEE
T ss_pred EEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEE
Confidence 3456788888883 12 166788877776554433322222222222 56677777754 2456
Q ss_pred EEEecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEecC------CeEEEEeCCCCCCCCceeeeeeeeccCCccccE
Q 023500 73 IWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYD------NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTI 146 (281)
Q Consensus 73 ~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d------~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v 146 (281)
++|... ..+..+..+......-..+. .++.+++.|+.+ ..+.++|+... .|..+..+......|
T Consensus 131 ~yd~~~-~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~---- 200 (318)
T 2woz_A 131 CYDPVA-AKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKG---DWKDLAPMKTPRSMF---- 200 (318)
T ss_dssp EEETTT-TEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTT---EEEEECCCSSCCBSC----
T ss_pred EEeCCC-CCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCC---EEEECCCCCCCcccc----
Confidence 666543 23333222221111111111 345566666542 35777776543 354443322111122
Q ss_pred EEEEEccCCCEEEEeeCCC-----cEEEEeCCc
Q 023500 147 WALSFNAKGDKLVSCSDDL-----TIKIWGADI 174 (281)
Q Consensus 147 ~~~~~~~~~~~l~s~~~d~-----~i~~w~~~~ 174 (281)
.++. -++..++.|+.++ .+.+||.+.
T Consensus 201 ~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 201 GVAI--HKGKIVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp EEEE--ETTEEEEEEEEETTEEEEEEEEEETTT
T ss_pred eEEE--ECCEEEEEcCcCCCCccceEEEEECCC
Confidence 1222 2456666665432 345666653
No 328
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=85.43 E-value=13 Score=29.98 Aligned_cols=147 Identities=15% Similarity=0.169 Sum_probs=82.4
Q ss_pred CCcEEEEec--CCCceeeeeee--c-CCC-CCeeEEEE--cCC-CC-EEEEecCCCcEEEEEecCC----CeeEEeEeec
Q 023500 24 DATTCIWED--VGGDYECVATL--E-GHE-NEVKSVSW--NAS-GT-LLATCGRDKSVWIWEVMPG----NEFECVSVLQ 89 (281)
Q Consensus 24 d~~i~lw~~--~~~~~~~~~~~--~-~h~-~~v~~v~~--~~~-~~-~l~s~~~d~~v~~w~~~~~----~~~~~~~~~~ 89 (281)
++.|++|+. .++....+... . +.. ..+..+++ +|. +. +++....++.+..|++... ...+.++.+.
T Consensus 98 ~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~ 177 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK 177 (355)
T ss_dssp CCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred CCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec
Confidence 678999954 44433222111 0 011 45666777 774 44 5777888899999998532 1223344443
Q ss_pred CCccceeEEEecCCCCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEE--ccCCC-E-EEEeeCCC
Q 023500 90 GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSF--NAKGD-K-LVSCSDDL 165 (281)
Q Consensus 90 ~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~-~-l~s~~~d~ 165 (281)
- .+.+..+...+....|+.+-++.-|..++.+-......+.+..+. ...-...+-.|++ .++++ + ++++-.+.
T Consensus 178 l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~--~g~l~aDvEGLai~~~~~g~gyLivSsQG~~ 254 (355)
T 3amr_A 178 M-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRAD--GRHLTRDIEGLTIYYAADGKGYLMASSQGNS 254 (355)
T ss_dssp C-SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBS--SSSBCSCEEEEEEEECGGGCEEEEEEEGGGT
T ss_pred C-CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEec--CCccccCcceEEEEecCCCCEEEEEEcCCCC
Confidence 3 346778888888889999888866544443221111112222221 1111234666666 45555 4 44444677
Q ss_pred cEEEEeCC
Q 023500 166 TIKIWGAD 173 (281)
Q Consensus 166 ~i~~w~~~ 173 (281)
++.+||.+
T Consensus 255 s~~Vydr~ 262 (355)
T 3amr_A 255 SYAIYDRQ 262 (355)
T ss_dssp EEEEEESS
T ss_pred EEEEEECC
Confidence 89999874
No 329
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=84.17 E-value=22 Score=31.61 Aligned_cols=68 Identities=12% Similarity=0.176 Sum_probs=43.7
Q ss_pred CCCCEEEEeeCCC--cEEEEecCCCceeeeee---ecCCCCCeeEEEEcCC-CCEEEEecC--C-----CcEEEEEecCC
Q 023500 13 PSGKLLATASFDA--TTCIWEDVGGDYECVAT---LEGHENEVKSVSWNAS-GTLLATCGR--D-----KSVWIWEVMPG 79 (281)
Q Consensus 13 ~~~~~l~tg~~d~--~i~lw~~~~~~~~~~~~---~~~h~~~v~~v~~~~~-~~~l~s~~~--d-----~~v~~w~~~~~ 79 (281)
.++++++.||.++ .+.+||..+..+..+.. +........++.+..+ +..++.||. + ..+..||+...
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 4788999998765 68899988887765543 1112222234555655 667777775 2 35778888655
Q ss_pred C
Q 023500 80 N 80 (281)
Q Consensus 80 ~ 80 (281)
.
T Consensus 579 ~ 579 (695)
T 2zwa_A 579 N 579 (695)
T ss_dssp C
T ss_pred c
Confidence 4
No 330
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=83.61 E-value=24 Score=31.45 Aligned_cols=153 Identities=11% Similarity=0.097 Sum_probs=78.1
Q ss_pred CCCCEEEEeeCC----CcEEEEecCCCceeeee-e-----ecCCCCCeeEEEEcCCCCEEEEecCCC------cEEEEEe
Q 023500 13 PSGKLLATASFD----ATTCIWEDVGGDYECVA-T-----LEGHENEVKSVSWNASGTLLATCGRDK------SVWIWEV 76 (281)
Q Consensus 13 ~~~~~l~tg~~d----~~i~lw~~~~~~~~~~~-~-----~~~h~~~v~~v~~~~~~~~l~s~~~d~------~v~~w~~ 76 (281)
.++.+++.||.+ +.+.+||..++.+..+. . +......-.++.+..++..++.||.++ .+.++|.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 467788888854 45788888887766554 2 111111222333322677777877543 4667776
Q ss_pred cCCCeeEEeEeecCCccceeEEEecCCCCeEEEEecCC--eEEEEeCCCCCCCCceeeee---eeeccCCccccEEEEEE
Q 023500 77 MPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN--TIKVWWAEDTDSDNWHCVQT---ISESNNGHSSTIWALSF 151 (281)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~--~v~~w~~~~~~~~~~~~~~~---~~~~~~~h~~~v~~~~~ 151 (281)
... .+..+..+...... .++..-.++.+++.|+.++ .+.+||.... .|..+.. ......+| .++.+
T Consensus 476 ~t~-~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~---~W~~~~~~g~~p~~r~~~----~a~v~ 546 (695)
T 2zwa_A 476 KTR-EWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEE---IFKDVTPKDEFFQNSLVS----AGLEF 546 (695)
T ss_dssp TTT-EEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTT---EEEECCCSSGGGGSCCBS----CEEEE
T ss_pred CCC-cEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCC---ceEEccCCCCCCCcccce----eEEEE
Confidence 532 33332222211111 1222223677788877665 6778876543 3544332 11111122 23444
Q ss_pred ccC-CCEEEEeeC--C-----CcEEEEeCCc
Q 023500 152 NAK-GDKLVSCSD--D-----LTIKIWGADI 174 (281)
Q Consensus 152 ~~~-~~~l~s~~~--d-----~~i~~w~~~~ 174 (281)
... +..++.|+. + ..+..||...
T Consensus 547 ~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~ 577 (695)
T 2zwa_A 547 DPVSKQGIILGGGFMDQTTVSDKAIIFKYDA 577 (695)
T ss_dssp ETTTTEEEEECCBCTTSSCBCCEEEEEEECT
T ss_pred eCCCCEEEEECCcCCCCCeeeCcEEEEEccC
Confidence 544 556666664 2 3466777654
No 331
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=81.53 E-value=18 Score=28.69 Aligned_cols=53 Identities=9% Similarity=0.083 Sum_probs=32.3
Q ss_pred CCCEEEEeeC-C---------CcEEEEecCCCceeeeeeec-CCCCCeeEEEEcCCCCEEEEecCC
Q 023500 14 SGKLLATASF-D---------ATTCIWEDVGGDYECVATLE-GHENEVKSVSWNASGTLLATCGRD 68 (281)
Q Consensus 14 ~~~~l~tg~~-d---------~~i~lw~~~~~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~d 68 (281)
++++++.|+. + +.+.+||..+.++..+..+. .......++. .+++.++.||.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~ 128 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVN 128 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE--ETTEEEEEECCC
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE--ECCEEEEEeCcC
Confidence 5778888876 2 45888998888776555443 1111222222 567777888765
No 332
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=79.09 E-value=22 Score=28.06 Aligned_cols=219 Identities=9% Similarity=-0.044 Sum_probs=114.2
Q ss_pred CCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCC-CCEEEEecCCCcEEEEEecCCCeeEEeEeecCCccceeEEEecC
Q 023500 24 DATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS-GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 102 (281)
Q Consensus 24 d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p 102 (281)
.+.|+..+..+........+. .-.....++|.+. +.+..+-...+.|..+++......+ ......-.....+++.+
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~--~~~~~~l~~p~glavd~ 88 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ--NVVVSGLLSPDGLACDW 88 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCC--EEEEECCSCCCEEEEET
T ss_pred cCeEEEEECCCCceEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceE--EEEcCCCCCccEEEEEc
Confidence 466888887654211111111 1234568999985 4455666677888888875442111 11111123356788887
Q ss_pred C-CCeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEEee--CCCcEEEEeCCcccccc
Q 023500 103 T-MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS--DDLTIKIWGADITRMQS 179 (281)
Q Consensus 103 ~-~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~--~d~~i~~w~~~~~~~~~ 179 (281)
. +.++++-...+.|.+.+.+.... ..+.. .....+..++++|.+..|+... ..+.|...+.+....
T Consensus 89 ~~g~ly~~d~~~~~I~~~~~dG~~~------~~l~~---~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-- 157 (318)
T 3sov_A 89 LGEKLYWTDSETNRIEVSNLDGSLR------KVLFW---QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-- 157 (318)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSC------EEEEC---SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC--
T ss_pred CCCeEEEEECCCCEEEEEECCCCcE------EEEEe---CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe--
Confidence 4 45666666778888887654321 11111 1124567899998765555554 246677776553211
Q ss_pred CCCCcccceeEEeecccCcceEEEEeCC-Cc-eeeecCCCCcEEEEecccCCCcCCccceeeeeeccCCCCCeeEEEEcC
Q 023500 180 GDGYASWRHLCTISGYHDRTIFSVHWSR-EG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSP 257 (281)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 257 (281)
+ .+....-.....+++++ ++ ++.+-...+.++.++.... ....+.. ........+++..
T Consensus 158 -------~---~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~------~~~~~~~---~~~~~P~glav~~ 218 (318)
T 3sov_A 158 -------F---IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT------NRQAVVK---GSLPHPFALTLFE 218 (318)
T ss_dssp -------E---EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC------SCEEEEC---SCCSCEEEEEEET
T ss_pred -------E---EEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCC------ceEEEec---CCCCCceEEEEeC
Confidence 0 00000112345566665 33 4555556667777755321 1111111 1123355666653
Q ss_pred CCCeeEEEeCCCCeEEEEEc
Q 023500 258 GERRLLASASDDGMIKIWEL 277 (281)
Q Consensus 258 ~~~~~~~s~~~Dg~v~iw~~ 277 (281)
..++.+-...+.|..++.
T Consensus 219 --~~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 219 --DILYWTDWSTHSILACNK 236 (318)
T ss_dssp --TEEEEEETTTTEEEEEET
T ss_pred --CEEEEEecCCCeEEEEEC
Confidence 356667666777777765
No 333
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=78.86 E-value=21 Score=27.80 Aligned_cols=144 Identities=9% Similarity=0.113 Sum_probs=66.5
Q ss_pred CEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecC----CC---c----EEEEEecCCCeeEE
Q 023500 16 KLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR----DK---S----VWIWEVMPGNEFEC 84 (281)
Q Consensus 16 ~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~----d~---~----v~~w~~~~~~~~~~ 84 (281)
.+++.|+. .+..||+.++++.. ..+..............++..++.||. ++ . +..+|... ..+..
T Consensus 17 ~i~~~GG~--~~~~yd~~~~~W~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~-~~W~~ 92 (318)
T 2woz_A 17 LILLVNDT--AAVAYDPMENECYL-TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVS-SEWVG 92 (318)
T ss_dssp EEEEECSS--EEEEEETTTTEEEE-EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTT-TEEEE
T ss_pred hhhhcccc--ceEEECCCCCceec-ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCC-CcEEE
Confidence 45666664 48899998887654 232211111122223456777888873 12 1 55666543 23332
Q ss_pred eEeecCCccceeEEEecCCCCeEEEEecC-------CeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCE
Q 023500 85 VSVLQGHAQDVKMVQWHPTMDVLFSCSYD-------NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDK 157 (281)
Q Consensus 85 ~~~~~~~~~~v~~v~~~p~~~~l~s~s~d-------~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 157 (281)
+..+......-..+.+ ++.+++.|+.+ ..+.++|... ..|..+..+.....+|. +.. .++..
T Consensus 93 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~---~~W~~~~~~p~~r~~~~-----~~~-~~~~i 161 (318)
T 2woz_A 93 LPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVA---AKWSEVKNLPIKVYGHN-----VIS-HNGMI 161 (318)
T ss_dssp CSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTT---TEEEEECCCSSCEESCE-----EEE-ETTEE
T ss_pred CCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCC---CCEeECCCCCCcccccE-----EEE-ECCEE
Confidence 2222211111112222 45666677654 2455665543 23544433322111222 112 35556
Q ss_pred EEEeeC------CCcEEEEeCCc
Q 023500 158 LVSCSD------DLTIKIWGADI 174 (281)
Q Consensus 158 l~s~~~------d~~i~~w~~~~ 174 (281)
++.|+. -..+..||...
T Consensus 162 yv~GG~~~~~~~~~~~~~yd~~~ 184 (318)
T 2woz_A 162 YCLGGKTDDKKCTNRVFIYNPKK 184 (318)
T ss_dssp EEECCEESSSCBCCCEEEEETTT
T ss_pred EEEcCCCCCCCccceEEEEcCCC
Confidence 666653 12467777654
No 334
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=76.20 E-value=55 Score=31.22 Aligned_cols=102 Identities=14% Similarity=0.044 Sum_probs=59.4
Q ss_pred EEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCC------CCEEEEecC-CCcEEEEEecCCCeeEEeEeec
Q 023500 17 LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS------GTLLATCGR-DKSVWIWEVMPGNEFECVSVLQ 89 (281)
Q Consensus 17 ~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~------~~~l~s~~~-d~~v~~w~~~~~~~~~~~~~~~ 89 (281)
.++.++ ++.+.+++...++.......+ -...|.|+++.|. +++++.|.. |++++++++..-+.. ....+.
T Consensus 525 ~vvva~-g~~l~~fel~~~~L~~~~~~~-l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~-~~~~L~ 601 (1158)
T 3ei3_A 525 QVVVAV-GRALYYLQIHPQELRQISHTE-MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELL-HKEMLG 601 (1158)
T ss_dssp EEEEEE-TTEEEEEEEETTEEEEEEEEE-CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEE-EEEECC
T ss_pred EEEEEE-CCEEEEEEeeCCceeeecccC-CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeE-EEEECC
Confidence 344443 456666665544433333322 3568999999763 368888886 999999999643322 222232
Q ss_pred CCccceeEEEec--CCCCeEEEEecCCeEEEEeCC
Q 023500 90 GHAQDVKMVQWH--PTMDVLFSCSYDNTIKVWWAE 122 (281)
Q Consensus 90 ~~~~~v~~v~~~--p~~~~l~s~s~d~~v~~w~~~ 122 (281)
+ ....+++.+. ....++..|-.||.+.-+.++
T Consensus 602 ~-~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d 635 (1158)
T 3ei3_A 602 G-EIIPRSILMTTFESSHYLLCALGDGALFYFGLN 635 (1158)
T ss_dssp S-SCCEEEEEEEEETTEEEEEEEETTSEEEEEEEC
T ss_pred C-CCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEc
Confidence 2 1122333322 233578888899988655543
No 335
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=73.48 E-value=47 Score=29.10 Aligned_cols=156 Identities=10% Similarity=0.012 Sum_probs=88.1
Q ss_pred ceeEEEEcCC-CCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCC-CEEEEecCCCcEEEEEecCCCee
Q 023500 5 TVRSCAWSPS-GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATCGRDKSVWIWEVMPGNEF 82 (281)
Q Consensus 5 ~i~~~~~~~~-~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~v~~w~~~~~~~~ 82 (281)
.+..++|++. +.++.+-...+.|..++..+...+.+ +...-.....+++.+.+ +...+-+..+.|.+.++.....
T Consensus 350 ~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v--~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~- 426 (619)
T 3s94_A 350 HAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFV--VTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMR- 426 (619)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE--ECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-
T ss_pred ccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEE--EECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeE-
Confidence 4567889885 44555545567788887765433222 12222456788998754 4556666778888888753321
Q ss_pred EEeEeecCCccceeEEEecCCCC-eEEEEec-CCeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccCCCEEEE
Q 023500 83 ECVSVLQGHAQDVKMVQWHPTMD-VLFSCSY-DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 160 (281)
Q Consensus 83 ~~~~~~~~~~~~v~~v~~~p~~~-~l~s~s~-d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 160 (281)
. ......-..-+.+++.|... ++++-.. .+.|...+++... . ..+. ...-..++.|++++++..|+-
T Consensus 427 ~--~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~---~---~~l~---~~~l~~P~GlalD~~~~~LY~ 495 (619)
T 3s94_A 427 K--ILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSD---R---VVLV---NTSLGWPNGLALDYDEGKIYW 495 (619)
T ss_dssp E--EEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS---C---EEEE---CSSCSCEEEEEEETTTTEEEE
T ss_pred E--EEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCc---c---EEEE---eCCCCCCeeeEEcccCCEEEE
Confidence 1 11222334568999999744 4454322 2456554443221 0 1111 111245678999987766666
Q ss_pred eeC-CCcEEEEeCCc
Q 023500 161 CSD-DLTIKIWGADI 174 (281)
Q Consensus 161 ~~~-d~~i~~w~~~~ 174 (281)
+.. .+.|..++.+.
T Consensus 496 aD~~~~~I~~~~~dG 510 (619)
T 3s94_A 496 GDAKTDKIEVMNTDG 510 (619)
T ss_dssp EETTTTEEEEEESSS
T ss_pred EECCCCEEEEEecCC
Confidence 654 45677777653
No 336
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=68.41 E-value=29 Score=30.27 Aligned_cols=57 Identities=14% Similarity=0.155 Sum_probs=34.3
Q ss_pred eEEEEcCCCCEEEEeeCC----------C--cEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEE
Q 023500 7 RSCAWSPSGKLLATASFD----------A--TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 64 (281)
Q Consensus 7 ~~~~~~~~~~~l~tg~~d----------~--~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s 64 (281)
-.|+|+|.|++++.-..+ + .+.+.+..+++...... ..-..+++.+.|+||++.|+.
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~-~P~gaE~TG~~fspDg~tlfv 547 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMV-GPIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEE-CCTTCEEEEEEECTTSSEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEe-CCCCccCcCeeECCCCCEEEE
Confidence 568999999977654432 1 23334444454333222 123468889999998776655
No 337
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=66.70 E-value=1e+02 Score=30.38 Aligned_cols=106 Identities=13% Similarity=0.203 Sum_probs=60.8
Q ss_pred EEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEE-cCCCCEEEEecCCCcEEEEEecCCCeeEEeEee
Q 023500 10 AWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW-NASGTLLATCGRDKSVWIWEVMPGNEFECVSVL 88 (281)
Q Consensus 10 ~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~-~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~ 88 (281)
-.+|..+++|.-. ..++.|++..+... ++... -.++|.-=.| +|+.--|+|. ..|.-|++.... .+...+
T Consensus 72 IMnP~~~iiALra-g~~lQiFnl~~k~k--lks~~-~~e~VvfWkWis~~~l~lVT~---~aVyHW~~~~~s--~P~k~f 142 (1630)
T 1xi4_A 72 IMNPASKVIALKA-GKTLQIFNIEMKSK--MKAHT-MTDDVTFWKWISLNTVALVTD---NAVYHWSMEGES--QPVKMF 142 (1630)
T ss_pred ccCCCcceEEEec-CCeEEEeehHHhhh--hcccc-cCCCceEEEecCCCeeEEEcC---CeEEEeccCCCC--ccHHHH
Confidence 3678888887664 67899999866542 33322 2245544456 4444446664 579999995422 233333
Q ss_pred cCC----ccceeEEEecCCCCeEEEEe-------cCCeEEEEeCCCC
Q 023500 89 QGH----AQDVKMVQWHPTMDVLFSCS-------YDNTIKVWWAEDT 124 (281)
Q Consensus 89 ~~~----~~~v~~v~~~p~~~~l~s~s-------~d~~v~~w~~~~~ 124 (281)
..| ...|..-.-+++.++++-.+ -.|.+.++.+++.
T Consensus 143 dR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~ 189 (1630)
T 1xi4_A 143 DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK 189 (1630)
T ss_pred hcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc
Confidence 333 23455556677777654222 3467777765543
No 338
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=65.33 E-value=80 Score=28.59 Aligned_cols=157 Identities=10% Similarity=0.141 Sum_probs=79.1
Q ss_pred cceeEEEEcCCC-CEEEEeeCCCcEEEEecCCCceeeeeeecC----CCCCeeEEEEcCC-CCEEEEecCCCc----EEE
Q 023500 4 RTVRSCAWSPSG-KLLATASFDATTCIWEDVGGDYECVATLEG----HENEVKSVSWNAS-GTLLATCGRDKS----VWI 73 (281)
Q Consensus 4 ~~i~~~~~~~~~-~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~----h~~~v~~v~~~~~-~~~l~s~~~d~~----v~~ 73 (281)
..|..|+++|.. ..+..+...+.|...+.....+..+....+ ....|.+|++.|. ...+..+..+.. -.|
T Consensus 15 g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v 94 (789)
T 1sqj_A 15 GYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAAF 94 (789)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCEE
T ss_pred CcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccEE
Confidence 468999999963 455556666777666555555544322111 1246899999984 344444332211 344
Q ss_pred EEecC-CCeeEEeEeecC------CccceeEEEecCCC-CeEEEEecCCeEEEEeCCCCCCCCceeeeeeeeccCCcccc
Q 023500 74 WEVMP-GNEFECVSVLQG------HAQDVKMVQWHPTM-DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSST 145 (281)
Q Consensus 74 w~~~~-~~~~~~~~~~~~------~~~~v~~v~~~p~~-~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~ 145 (281)
|.-.. ++.++.+..-.. ....+..+.++|.. +.++.+...+.| |.-.+. -..|+.+....... .....
T Consensus 95 ~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl--~~S~Dg-G~TW~~~~~~~~~~-~~~~~ 170 (789)
T 1sqj_A 95 YVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGI--WKSSDR-AKTWTNVTSIPDAF-TNGIG 170 (789)
T ss_dssp EEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCE--EEESST-TSSCEEETTSCCCC-STTTC
T ss_pred EEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCE--EEECCC-CcccCCCccCcccc-CCCCC
Confidence 54433 445544432100 01135678888853 455555544443 322221 23455443221100 01134
Q ss_pred EEEEEEccC-CCEEEEeeCC
Q 023500 146 IWALSFNAK-GDKLVSCSDD 164 (281)
Q Consensus 146 v~~~~~~~~-~~~l~s~~~d 164 (281)
+..+.++|. ...++.+..+
T Consensus 171 ~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 171 YTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp EEEEEECTTSTTCEEEEESS
T ss_pred eEEEEECCCCCCEEEEEEcC
Confidence 678888874 3455555543
No 339
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=64.41 E-value=80 Score=28.29 Aligned_cols=30 Identities=10% Similarity=0.195 Sum_probs=23.3
Q ss_pred CeeEEEEcCCCCEEEEecCCCcEEEEEecCCC
Q 023500 49 EVKSVSWNASGTLLATCGRDKSVWIWEVMPGN 80 (281)
Q Consensus 49 ~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~ 80 (281)
.|.++.+ +..++++-+.|+++|+|++..+.
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~ 252 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFT 252 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCc
Confidence 3444443 57899999999999999997654
No 340
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=64.21 E-value=55 Score=26.34 Aligned_cols=147 Identities=10% Similarity=0.109 Sum_probs=79.7
Q ss_pred CcEEEEecCCCceeeeeeecCCC----CCeeEEEEcCCCCEEEEec-------CCCcEEEEEecCCCeeEEeEeecCCcc
Q 023500 25 ATTCIWEDVGGDYECVATLEGHE----NEVKSVSWNASGTLLATCG-------RDKSVWIWEVMPGNEFECVSVLQGHAQ 93 (281)
Q Consensus 25 ~~i~lw~~~~~~~~~~~~~~~h~----~~v~~v~~~~~~~~l~s~~-------~d~~v~~w~~~~~~~~~~~~~~~~~~~ 93 (281)
..+.-|+..+. ..+++.++-|. ..|..-..+++.++++-.| -.|.+.+++..... ...+.+|..
T Consensus 126 taVyHWs~~~~-s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~----sQ~ieGhaa 200 (365)
T 2xzh_A 126 NAVYHWSMEGE-SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV----SQPIEGHAA 200 (365)
T ss_dssp SEEEEEESSTT-CCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE----EEEECCSEE
T ss_pred CcEEEEcccCC-CCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc----cceeeeeee
Confidence 44666665432 23444444443 3455556677888765333 13567788765432 345678865
Q ss_pred ceeEEEecC--CCC-eEEEEecC---CeEEEEeCCCC--CCCCc-eeeeeeeeccCCccccEEEEEEccCCCEEEEeeCC
Q 023500 94 DVKMVQWHP--TMD-VLFSCSYD---NTIKVWWAEDT--DSDNW-HCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDD 164 (281)
Q Consensus 94 ~v~~v~~~p--~~~-~l~s~s~d---~~v~~w~~~~~--~~~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 164 (281)
.-..+.... ... ++.-+... +++.+-++... ....+ +....+..+..+..+=.-++..++.-..++.-+.-
T Consensus 201 ~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~ 280 (365)
T 2xzh_A 201 SFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKY 280 (365)
T ss_dssp EEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETT
T ss_pred eeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCC
Confidence 443332221 112 33333332 58888888654 11111 11222222223333434577888777788888999
Q ss_pred CcEEEEeCCccc
Q 023500 165 LTIKIWGADITR 176 (281)
Q Consensus 165 ~~i~~w~~~~~~ 176 (281)
|.+.+||++.+.
T Consensus 281 G~ihlyDleTgt 292 (365)
T 2xzh_A 281 GYIHLYDLETGT 292 (365)
T ss_dssp SEEEEEETTTCC
T ss_pred cEEEEEEcccCc
Confidence 999999987553
No 341
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=61.63 E-value=68 Score=29.83 Aligned_cols=32 Identities=16% Similarity=0.117 Sum_probs=27.5
Q ss_pred ceeEEEEcCCCCEEEEeeCCCcEEEEecCCCc
Q 023500 5 TVRSCAWSPSGKLLATASFDATTCIWEDVGGD 36 (281)
Q Consensus 5 ~i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~ 36 (281)
.|.+++..++..++.+-+-|+.+++|+..++.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~ 268 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ 268 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCC
Confidence 45677788888999999999999999988775
No 342
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=59.99 E-value=60 Score=25.34 Aligned_cols=102 Identities=5% Similarity=0.044 Sum_probs=54.3
Q ss_pred EEEcCCCCEEEEeeCC--------------CcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEec--CCCcEE
Q 023500 9 CAWSPSGKLLATASFD--------------ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCG--RDKSVW 72 (281)
Q Consensus 9 ~~~~~~~~~l~tg~~d--------------~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~--~d~~v~ 72 (281)
-.++++|+.|.-.... ..|...+..+.+...+.. .. +..|+|++.+|+-.. .++.-.
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~-----~~--~~~~s~~g~~Iy~~~~~~~~~~~ 130 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDP-----DP--CIYASLIGNYIYYLHYDTQTATS 130 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEEC-----SC--EEEEEEETTEEEEEEESSSSCEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeec-----CC--ccEEEEeCCEEEEEeecCCCCce
Confidence 3467888877655432 245555555554333321 11 236788888877554 455556
Q ss_pred EEEecCCCeeEEeEeecCCccceeEEEecCCCCeEEEEec-CCeEEEEeCCC
Q 023500 73 IWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY-DNTIKVWWAED 123 (281)
Q Consensus 73 ~w~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~-d~~v~~w~~~~ 123 (281)
++.+...... ...+..+.. ..++|+++.|+-.+. ...|..-+++.
T Consensus 131 Iy~~~~dGs~--~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g 176 (302)
T 3s25_A 131 LYRIRIDGEE--KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTAS 176 (302)
T ss_dssp EEEEETTSCC--CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTT
T ss_pred EEEEECCCCC--eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCC
Confidence 6665433211 122222221 346777777765554 45666665543
No 343
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=59.60 E-value=91 Score=27.34 Aligned_cols=159 Identities=17% Similarity=0.118 Sum_probs=88.2
Q ss_pred cceeEEEEcCCCCE-EEEeeCCCcEEEEecCCCceeeee-e-ec--CCCCCeeEEEEcCCCCEE-EEecCCCcEEEEEec
Q 023500 4 RTVRSCAWSPSGKL-LATASFDATTCIWEDVGGDYECVA-T-LE--GHENEVKSVSWNASGTLL-ATCGRDKSVWIWEVM 77 (281)
Q Consensus 4 ~~i~~~~~~~~~~~-l~tg~~d~~i~lw~~~~~~~~~~~-~-~~--~h~~~v~~v~~~~~~~~l-~s~~~d~~v~~w~~~ 77 (281)
+.+..++|++.... +.+=...+.|..++..+.....+. . .. ..-.....+++...++.| .+-+..+.|.+.++.
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~ 419 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD 419 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC
Confidence 34678889886554 444344566777766543321111 1 00 023457899999876654 566677888888874
Q ss_pred CCCeeEEeEeecCCccceeEEEecCC-CCeEEEEecCC--eEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEccC
Q 023500 78 PGNEFECVSVLQGHAQDVKMVQWHPT-MDVLFSCSYDN--TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK 154 (281)
Q Consensus 78 ~~~~~~~~~~~~~~~~~v~~v~~~p~-~~~l~s~s~d~--~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 154 (281)
+... ...+...-...+.++++|. +.++++-.... .|...+++... . ..+.. ..-..++.|+++++
T Consensus 420 -G~~~--~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~---~---~~l~~---~~l~~P~gla~D~~ 487 (628)
T 4a0p_A 420 -GRSV--GVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTE---R---EVLFF---SGLSKPIALALDSR 487 (628)
T ss_dssp -SCEE--EEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCS---C---EEEEC---SSCSCEEEEEEETT
T ss_pred -CCeE--EEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCC---c---EEEEe---ccCCCccEEEEeCC
Confidence 3221 1122233455789999994 55555544433 34443333221 1 11111 11235688999998
Q ss_pred CCEEEEeeC-CCcEEEEeCCc
Q 023500 155 GDKLVSCSD-DLTIKIWGADI 174 (281)
Q Consensus 155 ~~~l~s~~~-d~~i~~w~~~~ 174 (281)
+..|+-+.. .+.|...+.+.
T Consensus 488 ~~~LYw~D~~~~~I~~~~~dG 508 (628)
T 4a0p_A 488 LGKLFWADSDLRRIESSDLSG 508 (628)
T ss_dssp TTEEEEEETTTTEEEEEETTS
T ss_pred CCEEEEEeCCCCEEEEEeCCC
Confidence 777766654 56788887753
No 344
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=55.69 E-value=1.6e+02 Score=29.08 Aligned_cols=149 Identities=11% Similarity=0.126 Sum_probs=81.4
Q ss_pred CCcEEEEecCCCceeeeeeecCC----CCCeeEEEEcCCCCEEEEec-------CCCcEEEEEecCCCeeEEeEeecCCc
Q 023500 24 DATTCIWEDVGGDYECVATLEGH----ENEVKSVSWNASGTLLATCG-------RDKSVWIWEVMPGNEFECVSVLQGHA 92 (281)
Q Consensus 24 d~~i~lw~~~~~~~~~~~~~~~h----~~~v~~v~~~~~~~~l~s~~-------~d~~v~~w~~~~~~~~~~~~~~~~~~ 92 (281)
+..|.-|+..+ ...+++.+.-| ...|..-.-+++.++++..| -.|.+.+++..... ...+.||.
T Consensus 124 ~~aVyHW~~~~-~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~----sQ~iegha 198 (1630)
T 1xi4_A 124 DNAVYHWSMEG-ESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV----SQPIEGHA 198 (1630)
T ss_pred CCeEEEeccCC-CCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc----chhhhHhH
Confidence 36688898754 22455555544 34555566678888865322 34778888875432 23456776
Q ss_pred cceeEEEec--CCCC-eEEEEec---CCeEEEEeCCCC--CCCCc-eeeeeeeeccCCccccEEEEEEccCCCEEEEeeC
Q 023500 93 QDVKMVQWH--PTMD-VLFSCSY---DNTIKVWWAEDT--DSDNW-HCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 163 (281)
Q Consensus 93 ~~v~~v~~~--p~~~-~l~s~s~---d~~v~~w~~~~~--~~~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 163 (281)
..-...... |... ++..+.. .+++.|-++... ....+ +....+..+..+...=+-++..++.-..+...+.
T Consensus 199 ~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk 278 (1630)
T 1xi4_A 199 ASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITK 278 (1630)
T ss_pred hhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEec
Confidence 544333332 2222 2222222 268888887654 11111 1111121111122222346777777677888889
Q ss_pred CCcEEEEeCCcccc
Q 023500 164 DLTIKIWGADITRM 177 (281)
Q Consensus 164 d~~i~~w~~~~~~~ 177 (281)
-|.+.+||+.++..
T Consensus 279 ~G~~~~~d~~t~~~ 292 (1630)
T 1xi4_A 279 YGYIHLYDLETGTC 292 (1630)
T ss_pred CceEEEEecccchh
Confidence 99999999876543
No 345
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=55.66 E-value=59 Score=28.35 Aligned_cols=70 Identities=19% Similarity=0.159 Sum_probs=45.2
Q ss_pred EEEEcCCCCEEEEe-eCCCcEEEEecCCC------c-----eeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEE
Q 023500 8 SCAWSPSGKLLATA-SFDATTCIWEDVGG------D-----YECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWE 75 (281)
Q Consensus 8 ~~~~~~~~~~l~tg-~~d~~i~lw~~~~~------~-----~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~ 75 (281)
.+.++|||++++.+ --+.++.++|...- + ...+...+---++ .-.+|.++|....|---|-.|--|+
T Consensus 327 Gv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGP-lHt~Fd~~G~aYTtlfidSqvvkWn 405 (638)
T 3sbq_A 327 GCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGP-LHTTFDGRGNAYTTLFIDSQVVKWN 405 (638)
T ss_dssp CEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCE-EEEEECSSSEEEEEETTTTEEEEEE
T ss_pred ceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcc-cEEEECCCCceEeeeeecceEEEEe
Confidence 46799999987654 46678999986521 0 0112222222233 3578999995556666888999999
Q ss_pred ecC
Q 023500 76 VMP 78 (281)
Q Consensus 76 ~~~ 78 (281)
+..
T Consensus 406 i~~ 408 (638)
T 3sbq_A 406 MEE 408 (638)
T ss_dssp HHH
T ss_pred ccH
Confidence 863
No 346
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=55.01 E-value=79 Score=27.51 Aligned_cols=58 Identities=16% Similarity=0.166 Sum_probs=36.3
Q ss_pred eeEEEEcCCCCEEEEeeCC------------CcEEEEecCCCceeeeeeecC-CCCCeeEEEEcCCCCEEEEe
Q 023500 6 VRSCAWSPSGKLLATASFD------------ATTCIWEDVGGDYECVATLEG-HENEVKSVSWNASGTLLATC 65 (281)
Q Consensus 6 i~~~~~~~~~~~l~tg~~d------------~~i~lw~~~~~~~~~~~~~~~-h~~~v~~v~~~~~~~~l~s~ 65 (281)
-..|.|+++|.+.+..... +.+..++..+++...+. .+ ....++.++|+||++.|+.+
T Consensus 478 PDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl--~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFM--VGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEE--ECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEE--eCCCCccccCCEECCCCCEEEEE
Confidence 4578999999987732211 13445555555543332 22 23568999999998877664
No 347
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=47.87 E-value=76 Score=28.15 Aligned_cols=62 Identities=18% Similarity=0.163 Sum_probs=36.4
Q ss_pred eEEEEecCCeE-EEEeCCCCCCCCce--eeeeeeeccCCccccEEEEEEccCCCEEEEeeCCCcEEE
Q 023500 106 VLFSCSYDNTI-KVWWAEDTDSDNWH--CVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKI 169 (281)
Q Consensus 106 ~l~s~s~d~~v-~~w~~~~~~~~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~ 169 (281)
.++.|+.+|.| |+.-.......... .+..+.. .....+|..|.++++...|+.++.++.+++
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v--~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTV--FREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEEC--SSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEee--cCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 57788899977 44432221110000 1111111 123567889999999999999999887766
No 348
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=46.91 E-value=84 Score=25.10 Aligned_cols=106 Identities=8% Similarity=0.032 Sum_probs=54.0
Q ss_pred CEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEE--cC-CCCEEEEe-cCCCcEEEEEecCCCeeEEeEeecC-
Q 023500 16 KLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW--NA-SGTLLATC-GRDKSVWIWEVMPGNEFECVSVLQG- 90 (281)
Q Consensus 16 ~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~--~~-~~~~l~s~-~~d~~v~~w~~~~~~~~~~~~~~~~- 90 (281)
.+++.++.||.|.-.|..+++........ ...++....- .+ ++..++.. ..||.+..++...+...... ....
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~-~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~-~~~~l 88 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPE-NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPL-SIRQL 88 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGG-GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEE-EHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCC-ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeee-ccccc
Confidence 35677889999988888777643322222 1112211110 01 22333333 57888888887554221111 1110
Q ss_pred -CccceeEEE----e-c----CCCCeEEEEecCCeEEEEeCCCC
Q 023500 91 -HAQDVKMVQ----W-H----PTMDVLFSCSYDNTIKVWWAEDT 124 (281)
Q Consensus 91 -~~~~v~~v~----~-~----p~~~~l~s~s~d~~v~~w~~~~~ 124 (281)
....+.. . . . -.+..+++++.++.+...+..+.
T Consensus 89 v~~SP~~~-~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG 131 (339)
T 2be1_A 89 VSTSPLHL-KTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNG 131 (339)
T ss_dssp HTTCSEEE-ECC----------CCEEEEECEEEEEEEEEETTTC
T ss_pred eecccccc-CCCceeecccccccCCEEEEEecCCEEEEEECCCC
Confidence 0111110 0 0 0 03557889999999988887765
No 349
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=45.51 E-value=47 Score=31.56 Aligned_cols=31 Identities=10% Similarity=0.135 Sum_probs=24.9
Q ss_pred eeEEEEcCCCCEEEEecCCCcEEEEEecCCC
Q 023500 50 VKSVSWNASGTLLATCGRDKSVWIWEVMPGN 80 (281)
Q Consensus 50 v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~ 80 (281)
+.+++..++..++++-+.|+++|+|++..+.
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~ 270 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ 270 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCC
Confidence 3455566778899999999999999997653
No 350
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=44.01 E-value=1.3e+02 Score=26.31 Aligned_cols=56 Identities=18% Similarity=0.312 Sum_probs=32.2
Q ss_pred EEEEcCCCCEEEEecCC----------CcEEEEEecCC-CeeEEeEeecC-CccceeEEEecCCCCeEEE
Q 023500 52 SVSWNASGTLLATCGRD----------KSVWIWEVMPG-NEFECVSVLQG-HAQDVKMVQWHPTMDVLFS 109 (281)
Q Consensus 52 ~v~~~~~~~~l~s~~~d----------~~v~~w~~~~~-~~~~~~~~~~~-~~~~v~~v~~~p~~~~l~s 109 (281)
-|.|+|.|++++.-..+ +.-.+|-.... .+. .+.+.+ ...+++.++|+|+++.++.
T Consensus 480 NL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~--~rf~~~P~gaE~TG~~fspDg~tlfv 547 (592)
T 3zwu_A 480 GLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEI--RRFMVGPIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp EEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCE--EEEEECCTTCEEEEEEECTTSSEEEE
T ss_pred ceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeE--EEEEeCCCCccCcCeeECCCCCEEEE
Confidence 57899999876653322 22234433221 121 222222 3568999999999887766
No 351
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=43.34 E-value=23 Score=32.87 Aligned_cols=32 Identities=9% Similarity=0.130 Sum_probs=26.4
Q ss_pred CeeEEEEcCCCCEEEEecCCCcEEEEEecCCC
Q 023500 49 EVKSVSWNASGTLLATCGRDKSVWIWEVMPGN 80 (281)
Q Consensus 49 ~v~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~ 80 (281)
.+.++...++..++++-+.|+++|+|++..+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~ 268 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ 268 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCC
Confidence 45566777788899999999999999987653
No 352
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=36.10 E-value=2.4e+02 Score=25.32 Aligned_cols=30 Identities=10% Similarity=0.175 Sum_probs=23.7
Q ss_pred eeEEEEcCCCCEEEEeeCCCcEEEEecCCCce
Q 023500 6 VRSCAWSPSGKLLATASFDATTCIWEDVGGDY 37 (281)
Q Consensus 6 i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~~ 37 (281)
|.++.+ +..++++-+.|+.+++|+..++..
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~l 253 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTL 253 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCce
Confidence 444444 477999999999999999988753
No 353
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=33.77 E-value=1.8e+02 Score=23.23 Aligned_cols=156 Identities=12% Similarity=0.115 Sum_probs=74.6
Q ss_pred cceeEEEEcC--CCCEEEEeeCCC----cEEEEecCCCceeeeee---ecC--------CCCCeeEEEEcC-C-CCEEEE
Q 023500 4 RTVRSCAWSP--SGKLLATASFDA----TTCIWEDVGGDYECVAT---LEG--------HENEVKSVSWNA-S-GTLLAT 64 (281)
Q Consensus 4 ~~i~~~~~~~--~~~~l~tg~~d~----~i~lw~~~~~~~~~~~~---~~~--------h~~~v~~v~~~~-~-~~~l~s 64 (281)
..|.+++++| .+.++|.+. .+ .|...+.....+..+.. +.. +...|.++++.| + ...|..
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~~-~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~ 133 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAAR-TGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA 133 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEEE-C--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred CceEEEEECCCCCCeEEEEec-CCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEE
Confidence 4588999999 566665443 33 34444333333433321 111 112577888987 3 455555
Q ss_pred ecCCCcEEEEEecC-CCeeEEeEeec----------------CCccceeEEEecCC-CCeEEEEecCCeEEEEeCCCCCC
Q 023500 65 CGRDKSVWIWEVMP-GNEFECVSVLQ----------------GHAQDVKMVQWHPT-MDVLFSCSYDNTIKVWWAEDTDS 126 (281)
Q Consensus 65 ~~~d~~v~~w~~~~-~~~~~~~~~~~----------------~~~~~v~~v~~~p~-~~~l~s~s~d~~v~~w~~~~~~~ 126 (281)
+...+- ||.... +..++.+.... .....+.++.+.|. ...++.+..++.+... .+. -
T Consensus 134 g~~~gg--l~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s--~Dg-G 208 (394)
T 3b7f_A 134 GTSPQG--LFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFES--TDA-G 208 (394)
T ss_dssp EEETTE--EEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEE--SST-T
T ss_pred EecCCc--EEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEE--CCC-C
Confidence 554443 344433 33443332111 11235778889884 3455555545544433 221 1
Q ss_pred CCceeeeeeeec--cC----CccccEEEEEEccC-CCEEEEeeCCC
Q 023500 127 DNWHCVQTISES--NN----GHSSTIWALSFNAK-GDKLVSCSDDL 165 (281)
Q Consensus 127 ~~~~~~~~~~~~--~~----~h~~~v~~~~~~~~-~~~l~s~~~d~ 165 (281)
..|+.+..-... .. .....+.++.++|. ...|..+...+
T Consensus 209 ~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g 254 (394)
T 3b7f_A 209 TDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG 254 (394)
T ss_dssp SSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE
T ss_pred CCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe
Confidence 234332110000 00 00134788999886 35666666555
No 354
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=30.79 E-value=2.1e+02 Score=23.06 Aligned_cols=198 Identities=10% Similarity=0.164 Sum_probs=99.4
Q ss_pred EEEcCCCCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEE-cCCCCEEEEecCCCcEEEEEecCCCeeEEeEe
Q 023500 9 CAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW-NASGTLLATCGRDKSVWIWEVMPGNEFECVSV 87 (281)
Q Consensus 9 ~~~~~~~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~-~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~ 87 (281)
+-.+|..+++|.-. ...+++++..+... ++... -.+.|.-=+| +++---|+|. ..|.-|++..... +.+.
T Consensus 72 AIMnP~~~ViALra-g~~LQiFnletK~k--lks~~-~~e~VvfWkWis~~~L~lVT~---taVyHWs~~~~s~--P~kv 142 (365)
T 2xzh_A 72 AIMNPASKVIALKA-GKTLQIFNIEMKSK--MKAHT-MTDDVTFWKWISLNTVALVTD---NAVYHWSMEGESQ--PVKM 142 (365)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETTTTEE--EEEEE-CSSCEEEEEECSSSEEEEEES---SEEEEEESSTTCC--CEEE
T ss_pred eeeCCCccEEEEec-CCeEEEechHHhhh--hccee-cCCccEEEEecCCCeEEEEcC---CcEEEEcccCCCC--Ccee
Confidence 44788889888765 67899999987653 33333 2356655566 3443345664 5799999865332 3444
Q ss_pred ecCCc----cceeEEEecCCCCeEEEEe---cC----CeEEEEeCCCCCCCCceeeeeeeeccCCccccEEEEEEc--cC
Q 023500 88 LQGHA----QDVKMVQWHPTMDVLFSCS---YD----NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFN--AK 154 (281)
Q Consensus 88 ~~~~~----~~v~~v~~~p~~~~l~s~s---~d----~~v~~w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~ 154 (281)
+..|. ..|..-..+++.+.++-.+ .+ |.+.+|-.++. .++..+||.+.-..+.+. +.
T Consensus 143 FdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~----------~sQ~ieGhaa~F~~~~~~g~~~ 212 (365)
T 2xzh_A 143 FDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK----------VSQPIEGHAASFAQFKMEGNAE 212 (365)
T ss_dssp EECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT----------EEEEECCSEEEEEEECCTTCSS
T ss_pred eecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc----------ccceeeeeeeeeEEEecCCCCC
Confidence 44442 3445555677777543222 23 56677765543 222334554432222111 11
Q ss_pred CC-EEEEeeC---CCcEEEEeCCccccccCCCCcccceeEE-ee-cccCcceEEEEeCC-CceeeecCCCCcEEEEeccc
Q 023500 155 GD-KLVSCSD---DLTIKIWGADITRMQSGDGYASWRHLCT-IS-GYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESK 227 (281)
Q Consensus 155 ~~-~l~s~~~---d~~i~~w~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~v~~~~~~~-~~~~~~~~~d~~~~~~~~~~ 227 (281)
.. +|.-+.+ .+.+.+.++... +.....+.. +.... +. .....-..++..++ .|.+.....-|.+.+|+...
T Consensus 213 ~~~lf~fa~r~~~g~kLhIiEi~~~-~~~~~~f~k-k~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleT 290 (365)
T 2xzh_A 213 ESTLFCFAVRGQAGGKLHIIEVGTP-PTGNQPFPK-KAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLET 290 (365)
T ss_dssp CEEEEEEEEEETTEEEEEEEECSSC-CTTCCCCCC-EEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTT
T ss_pred CceEEEEEEecCCCcEEEEEEcCCC-CCCCCCccc-ccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEccc
Confidence 11 2222222 247777765321 011111110 00000 00 01122223444444 46777778888999997754
No 355
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=30.37 E-value=57 Score=31.03 Aligned_cols=31 Identities=13% Similarity=0.094 Sum_probs=25.9
Q ss_pred eeEEEEcCCCCEEEEeeCCCcEEEEecCCCc
Q 023500 6 VRSCAWSPSGKLLATASFDATTCIWEDVGGD 36 (281)
Q Consensus 6 i~~~~~~~~~~~l~tg~~d~~i~lw~~~~~~ 36 (281)
|.+++..++..++++-+-|+.+++|+..++.
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~ 270 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ 270 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCC
Confidence 4456677788999999999999999988774
No 356
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=28.61 E-value=1.7e+02 Score=24.74 Aligned_cols=62 Identities=18% Similarity=0.125 Sum_probs=34.8
Q ss_pred eEEEEecCCeE-EEEeCCCCCCC--CceeeeeeeeccCCccccEEEEEEccCCCEEEEeeCCCcEEE
Q 023500 106 VLFSCSYDNTI-KVWWAEDTDSD--NWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKI 169 (281)
Q Consensus 106 ~l~s~s~d~~v-~~w~~~~~~~~--~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~ 169 (281)
.++.|..+|.| |+--....... ....+..+... ....+|..+.++++..+|+.++.++-+++
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~--~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVF--REPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCS--SSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeec--CCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 57788889977 44322111100 00111122211 12367889999999999999998876655
No 357
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=27.71 E-value=1.6e+02 Score=25.73 Aligned_cols=73 Identities=5% Similarity=0.016 Sum_probs=46.6
Q ss_pred eEEEEcCCCCEEEE-ecCCCcEEEEEecCCCe---------eEEeEeecCCccceeEEEecCCCCeEEEEecCCeEEEEe
Q 023500 51 KSVSWNASGTLLAT-CGRDKSVWIWEVMPGNE---------FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWW 120 (281)
Q Consensus 51 ~~v~~~~~~~~l~s-~~~d~~v~~w~~~~~~~---------~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d~~v~~w~ 120 (281)
..+..+|||++++. |-.+.++.++|+..... ..++.....-.-.-.-.+|.++++.+.|---|..|--|+
T Consensus 326 HGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkWn 405 (638)
T 3sbq_A 326 HGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKWN 405 (638)
T ss_dssp CCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEE
T ss_pred cceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEEe
Confidence 47788999998654 55688999999863110 000000000112234567889886666777899999998
Q ss_pred CCC
Q 023500 121 AED 123 (281)
Q Consensus 121 ~~~ 123 (281)
++.
T Consensus 406 i~~ 408 (638)
T 3sbq_A 406 MEE 408 (638)
T ss_dssp HHH
T ss_pred ccH
Confidence 764
No 358
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=27.61 E-value=1.2e+02 Score=19.17 Aligned_cols=58 Identities=9% Similarity=0.064 Sum_probs=30.7
Q ss_pred CCEEEEeeCCCcEEEEecCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecCCCcEEEEEe
Q 023500 15 GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEV 76 (281)
Q Consensus 15 ~~~l~tg~~d~~i~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~~w~~ 76 (281)
|++-+.-..|+.+.||+..+ ......-.........+.+..+|.+++..+. +. .+|..
T Consensus 19 g~y~l~~q~DgNLvly~~~~--~vW~ant~~~~~~~~~L~l~~dGnLvL~d~~-~~-~vWss 76 (105)
T 4h3o_A 19 EPYHFIMQDDCNLVLYDHST--STWASNTEIGGKSGCSAVLQSDGNFVVYDSS-GR-SLWAS 76 (105)
T ss_dssp TTEEEEECTTSCEEEEETTE--EEEECCCCCTTCCSCEEEECTTSCEEEECTT-CC-EEEEC
T ss_pred CCEEEEECCCCeEEEEECCE--EEEEecCCCCCCccEEEEEeCCccEEEECCC-cE-EEEEe
Confidence 55666667888888886321 1111111101112235778888888776443 33 35764
No 359
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=24.28 E-value=3.6e+02 Score=23.53 Aligned_cols=59 Identities=19% Similarity=0.300 Sum_probs=33.6
Q ss_pred eEEEEcCCCCEEE-EecCC---------CcEEEEEecCC-CeeEEeEeecC-CccceeEEEecCCCCeEEEEe
Q 023500 51 KSVSWNASGTLLA-TCGRD---------KSVWIWEVMPG-NEFECVSVLQG-HAQDVKMVQWHPTMDVLFSCS 111 (281)
Q Consensus 51 ~~v~~~~~~~~l~-s~~~d---------~~v~~w~~~~~-~~~~~~~~~~~-~~~~v~~v~~~p~~~~l~s~s 111 (281)
..|.|.++|.+.+ +-+.. +.-.+|-+... .+. ...+.+ ....++.++|+|+++.|+.+-
T Consensus 479 DnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel--~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEI--RRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCE--EEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeE--EEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 4788999998766 43210 11144544331 222 222222 235689999999998777643
No 360
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=23.80 E-value=2.5e+02 Score=21.68 Aligned_cols=91 Identities=8% Similarity=0.040 Sum_probs=47.5
Q ss_pred EEEcCCCCEEEEee--CCCcEEEEe--cCCCceeeeeeecCCCCCeeEEEEcCCCCEEEEecC-CCcEEEEEecCCCeeE
Q 023500 9 CAWSPSGKLLATAS--FDATTCIWE--DVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR-DKSVWIWEVMPGNEFE 83 (281)
Q Consensus 9 ~~~~~~~~~l~tg~--~d~~i~lw~--~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d~~v~~w~~~~~~~~~ 83 (281)
..|+++++.|+-.. .++.-.||. ..+...+ .+..+.. .+|+|+++.|.-.+. ..+|.+-++... ..+
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~---~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~-~~~ 180 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKK---KIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQ-SEA 180 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETTSCCCE---EEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTT-EEE
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECCCCCeE---EEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCC-CEE
Confidence 36788888777555 345555554 3333222 2222322 356788888764444 566666665432 212
Q ss_pred EeEeecCCccceeEEEecCCCCeEEEEecC
Q 023500 84 CVSVLQGHAQDVKMVQWHPTMDVLFSCSYD 113 (281)
Q Consensus 84 ~~~~~~~~~~~v~~v~~~p~~~~l~s~s~d 113 (281)
..+.+. . ...++|++..|+-...+
T Consensus 181 --~l~~~~---~-~~~~~P~g~~iy~t~~~ 204 (302)
T 3s25_A 181 --LFYDCN---C-YKPVVLDDTNVYYMDVN 204 (302)
T ss_dssp --EEECSC---E-EEEEEEETTEEEEEEGG
T ss_pred --EEeCCC---c-cceeeecCCEEEEEEcC
Confidence 222221 1 22356888877765544
No 361
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=23.70 E-value=87 Score=22.50 Aligned_cols=33 Identities=9% Similarity=0.157 Sum_probs=22.6
Q ss_pred eeEEEEcCCCC-EEEEeeCCCcEEEEecCCCcee
Q 023500 6 VRSCAWSPSGK-LLATASFDATTCIWEDVGGDYE 38 (281)
Q Consensus 6 i~~~~~~~~~~-~l~tg~~d~~i~lw~~~~~~~~ 38 (281)
+..+.|...+. -+++...++++.|+|++-+++.
T Consensus 121 llsl~f~~g~aHaia~S~~g~~~tlFDPN~GEF~ 154 (188)
T 1ukf_A 121 LLSLRFANVQGHAIACSCEGSQFKLFDPNLGEFQ 154 (188)
T ss_dssp EEEEEETTTEEEEEEEEEETTEEEEEETTTEEEE
T ss_pred EEEEEecCCCceeEEeccCCCeEEEeCCCCceee
Confidence 44566665433 3666677889999999887653
Done!