BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 023505
         (281 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From
           Shewanella Oneidensis At 2.20 A Resolution
 pdb|3ON7|B Chain B, Crystal Structure Of A Putative Oxygenase (So_2589) From
           Shewanella Oneidensis At 2.20 A Resolution
 pdb|3ON7|C Chain C, Crystal Structure Of A Putative Oxygenase (So_2589) From
           Shewanella Oneidensis At 2.20 A Resolution
 pdb|3ON7|D Chain D, Crystal Structure Of A Putative Oxygenase (So_2589) From
           Shewanella Oneidensis At 2.20 A Resolution
          Length = 280

 Score = 84.0 bits (206), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 118/263 (44%), Gaps = 44/263 (16%)

Query: 6   QLPVIDLSSPDRLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFSLQLEDKM 65
           +L  ID  + D   +AK   ++  + GF  L NH +++EL+ +++ E + FF+ + +++ 
Sbjct: 3   KLETIDYRAAD---SAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNSEAKNEF 59

Query: 66  KLARKEHRGYTALCDEILDPSSTSE-------GDPKESFYIGPLEGTLSSMNQWPSLEIL 118
              R+ H G+         P+S SE        D KE +++            +P   I 
Sbjct: 60  XFNRETHDGFF--------PASISETAKGHTVKDIKEYYHV------------YPWGRIP 99

Query: 119 PTWRSTMEYYHQKVLSAGXXXXXXXXXXXXXXEDFFEKVGALDAP-------MAFLRLLH 171
            + R+ +  Y++K   A                D  +   ++  P          LR+LH
Sbjct: 100 DSLRANILAYYEK---ANTLASELLEWIETYSPDEIKAKFSIPLPEXIANSHKTLLRILH 156

Query: 172 YPGELVSSNQEVCGASAHSDYGMITLLATDGVPGLQVCREKFNQPRLWEDVPNIKGALIV 231
           YP            A+AH D  +IT+L T   PGLQV  +  +    W DVP+  G +I+
Sbjct: 157 YPPXTGDEEXGAIRAAAHEDINLITVLPTANEPGLQVKAKDGS----WLDVPSDFGNIII 212

Query: 232 NIGDMMERWTNCLFRSTLHRVMS 254
           NIGD ++  ++  F ST HRV++
Sbjct: 213 NIGDXLQEASDGYFPSTSHRVIN 235


>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase
           Family Protein (Cc_0200) From Caulobacter Crescentus At
           1.44 A Resolution
 pdb|3OOX|B Chain B, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase
           Family Protein (Cc_0200) From Caulobacter Crescentus At
           1.44 A Resolution
          Length = 312

 Score = 77.4 bits (189), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 114/269 (42%), Gaps = 20/269 (7%)

Query: 2   TEALQLPVIDLSSPDRLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFSLQL 61
           T A+      L + D    A+ +  +   YGF  L ++ +++  I    + +K FF+L +
Sbjct: 4   TSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPV 63

Query: 62  EDKMKLA--RKEHRGYTALCDEILDPSSTSEGDPKESFYIG---PLEGTLSSM---NQWP 113
           E K + A  +   RGY     E          D KE ++ G   P      +    N WP
Sbjct: 64  ETKKQYAGVKGGARGYIPFGVETA--KGADHYDLKEFWHXGRDLPPGHRFRAHXADNVWP 121

Query: 114 SLEILPTWRSTMEYYHQKVLSAGXXXXXXXXXXXXXXEDFFEKVGALDAPMAFLRLLHYP 173
           +   +P ++  + + +  +   G               DFF+    +    + LRLLHYP
Sbjct: 122 AE--IPAFKHDVSWLYNSLDGXGGKVLEAIATYLKLERDFFKPT--VQDGNSVLRLLHYP 177

Query: 174 GELVSSNQEVCGASAHSDYGMITLLATDGVPGLQVCREKFNQPRLWEDVPNIKGALIVNI 233
              +  +     A AH D   ITLL      GL+V     ++   W  +    G L++NI
Sbjct: 178 P--IPKDATGVRAGAHGDINTITLLLGAEEGGLEV----LDRDGQWLPINPPPGCLVINI 231

Query: 234 GDMMERWTNCLFRSTLHRVMSSGQERYSV 262
           GD +ER TN +  ST+HRV++   ER  V
Sbjct: 232 GDXLERLTNNVLPSTVHRVVNPPPERRGV 260


>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed
           With Trans-Dihydroquercetin
 pdb|1GP6|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed
           With Trans-Dihydroquercetin (With 30 Min Exposure To O2)
          Length = 356

 Score = 75.1 bits (183), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 118/254 (46%), Gaps = 18/254 (7%)

Query: 6   QLPVIDLSSPD------RLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFSL 59
           Q+P IDL + +      R +  + +++A +D+G  +L+NHG+  +L+ ++    ++FFSL
Sbjct: 46  QVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSL 105

Query: 60  QLEDKMKLARKEHRGYTALCDEILDPSSTSEGDPKESFYIGPLEGTLSSMNQWPSLEILP 119
            +E+K K A  +  G        L  +++ + + ++ F+          ++ WP     P
Sbjct: 106 SVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPK---TP 162

Query: 120 T--WRSTMEYYHQKVLSAGXXXXXXXXXXXXXXEDFFEKVGALDAPMAFLRLLHYPGELV 177
           +    +T EY     L A               +   ++VG L+  +  +++ +YP    
Sbjct: 163 SDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPK--C 220

Query: 178 SSNQEVCGASAHSDYGMITLLATDGVPGLQVCREKFNQPRLWEDVPNIKGALIVNIGDMM 237
              +   G  AH+D   +T +  + VPGLQ+  E       W     +  +++++IGD +
Sbjct: 221 PQPELALGVEAHTDVSALTFILHNMVPGLQLFYEG-----KWVTAKCVPDSIVMHIGDTL 275

Query: 238 ERWTNCLFRSTLHR 251
           E  +N  ++S LHR
Sbjct: 276 EILSNGKYKSILHR 289


>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed
           With Naringenin
          Length = 355

 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 118/254 (46%), Gaps = 18/254 (7%)

Query: 6   QLPVIDLSSPD------RLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFSL 59
           Q+P IDL + +      R +  + +++A +D+G  +L+NHG+  +L+ ++    ++FFSL
Sbjct: 45  QVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSL 104

Query: 60  QLEDKMKLARKEHRGYTALCDEILDPSSTSEGDPKESFYIGPLEGTLSSMNQWPSLEILP 119
            +E+K K A  +  G        L  +++ + + ++ F+          ++ WP     P
Sbjct: 105 SVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPK---TP 161

Query: 120 T--WRSTMEYYHQKVLSAGXXXXXXXXXXXXXXEDFFEKVGALDAPMAFLRLLHYPGELV 177
           +    +T EY     L A               +   ++VG L+  +  +++ +YP    
Sbjct: 162 SDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPK--C 219

Query: 178 SSNQEVCGASAHSDYGMITLLATDGVPGLQVCREKFNQPRLWEDVPNIKGALIVNIGDMM 237
              +   G  AH+D   +T +  + VPGLQ+  E       W     +  +++++IGD +
Sbjct: 220 PQPELALGVEAHTDVSALTFILHNMVPGLQLFYEG-----KWVTAKCVPDSIVMHIGDTL 274

Query: 238 ERWTNCLFRSTLHR 251
           E  +N  ++S LHR
Sbjct: 275 EILSNGKYKSILHR 288


>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana
           (Selenomethionine Substituted)
          Length = 356

 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 115/254 (45%), Gaps = 18/254 (7%)

Query: 6   QLPVIDLSSPD------RLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFSL 59
           Q+P IDL + +      R +  + +++A +D+G  +L+NHG+  +L  ++    ++FFSL
Sbjct: 46  QVPTIDLKNIESDDEKIRENCIEELKKASLDWGVXHLINHGIPADLXERVKKAGEEFFSL 105

Query: 60  QLEDKMKLARKEHRGYTALCDEILDPSSTSEGDPKESFYIGPLEGTLSSMNQWPSLEILP 119
            +E+K K A  +  G        L  +++ + + ++ F+          ++ WP     P
Sbjct: 106 SVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPK---TP 162

Query: 120 T--WRSTMEYYHQKVLSAGXXXXXXXXXXXXXXEDFFEKVGALDAPMAFLRLLHYPGELV 177
           +    +T EY     L A               +   ++VG L+  +   ++ +YP    
Sbjct: 163 SDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQXKINYYPK--C 220

Query: 178 SSNQEVCGASAHSDYGMITLLATDGVPGLQVCREKFNQPRLWEDVPNIKGALIVNIGDMM 237
              +   G  AH+D   +T +  + VPGLQ+  E       W     +  +++ +IGD +
Sbjct: 221 PQPELALGVEAHTDVSALTFILHNXVPGLQLFYEG-----KWVTAKCVPDSIVXHIGDTL 275

Query: 238 ERWTNCLFRSTLHR 251
           E  +N  ++S LHR
Sbjct: 276 EILSNGKYKSILHR 289


>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase
 pdb|1WA6|X Chain X, The Structure Of Acc Oxidase
          Length = 319

 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 115/256 (44%), Gaps = 27/256 (10%)

Query: 6   QLPVIDL---SSPDRLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFSLQLE 62
             P+I L   +  +R +T + I+ AC ++GFF LVNHG+  E+   +   +K  +    E
Sbjct: 3   NFPIISLDKVNGVERAATXEXIKDACENWGFFELVNHGIPREVXDTVEKXTKGHYKKCXE 62

Query: 63  DKMK--LARKEHRGYTALCDEILDPSSTSEGDPKESFYIGPLEGTLSSMNQWPSLEILPT 120
            + K  +A K   G  A           ++ D + +F++  L   +S++++ P L+    
Sbjct: 63  QRFKELVASKALEGVQA---------EVTDXDWESTFFLKHL--PISNISEVPDLD--EE 109

Query: 121 WRSTMEYYHQKVLSAGXXXXXXXXXXXXXXEDFFEKV-GALDAPMAFLRLLHYPGELVSS 179
           +R     + +++                  + + +        P    ++ +YP      
Sbjct: 110 YREVXRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPP--CPK 167

Query: 180 NQEVCGASAHSDYGMITLL-ATDGVPGLQVCREKFNQPRLWEDVPNIKGALIVNIGDMME 238
              + G  AH+D G I LL   D V GLQ+ ++       W DVP  + +++VN+GD +E
Sbjct: 168 PDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG-----QWIDVPPXRHSIVVNLGDQLE 222

Query: 239 RWTNCLFRSTLHRVMS 254
             TN  ++S  HRV++
Sbjct: 223 VITNGKYKSVXHRVIA 238


>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant
          Length = 325

 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 112/287 (39%), Gaps = 42/287 (14%)

Query: 6   QLPVIDLS------SPDRLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKF-FS 58
            +P ID+S         ++  A+ I  A  D GFFY VNHG+  + +SQ   ++K+F  S
Sbjct: 8   NVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGINVQRLSQ---KTKEFHMS 64

Query: 59  LQLEDKMKLA----RKEHRGYTALCDEILDPSSTSEGDPKESF-YIGP----------LE 103
           +  E+K  LA     KEH+        +  P   +     ESF Y+ P           +
Sbjct: 65  ITPEEKWDLAIRAYNKEHQDQVRAGYYLSIPGKKA----VESFCYLNPNFTPDHPRIQAK 120

Query: 104 GTLSSMNQWPSLEILPTWRSTMEYYHQKVLSAGXXXXXXXXXXXXXXEDFFEKVGALDAP 163
                +N WP     P ++   E Y+  V                  E+FF +    D  
Sbjct: 121 TPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALLKGYALALGKEENFFARHFKPDDT 180

Query: 164 MAFLRLLHYP--------GELVSSNQEVCGASAHSDYGMITLLATDGVPGLQVCREKFNQ 215
           +A + L+ YP            +++        H D  +IT+L    V  LQV       
Sbjct: 181 LASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQV-----ET 235

Query: 216 PRLWEDVPNIKGALIVNIGDMMERWTNCLFRSTLHRVMSSGQERYSV 262
              ++D+       ++N G  M   TN  +++ +HRV     ER S+
Sbjct: 236 AAGYQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWVNAERQSL 282


>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans
           (Manganese Complex)
 pdb|1IPS|B Chain B, Isopenicillin N Synthase From Aspergillus Nidulans
           (Manganese Complex)
 pdb|1QJE|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Ip1 -
           Fe Complex)
 pdb|1QJF|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans
           (Monocyclic Sulfoxide - Fe Complex)
 pdb|1QIQ|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Acmc
           Fe Complex)
 pdb|1HB4|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Oxygen
           Exposed Product From Anaerobic Acov Fe Complex)
 pdb|1HB3|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Oxygen
           Exposed Product From Anaerobic Acov Fe Complex)
 pdb|1HB2|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Oxygen
           Exposed Product From Anaerobic Acov Fe Complex)
 pdb|1HB1|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans
           (Anaerobic Acov Fe Complex)
 pdb|1ODM|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans
           (anaerobic Ac-vinylglycine Fe Complex)
 pdb|1ODN|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans
           (Oxygen-Exposed Product From Anaerobic Ac-Vinylglycine
           Fe Complex)
 pdb|1OBN|A Chain A, Isopenicillin N Synthase
           Aminoadipoyl-cysteinyl-aminobutyrate-fe-no Complex
 pdb|1OC1|A Chain A, Isopenicillin N Synthase
           Aminoadipoyl-cysteinyl-aminobutyrate-fe Complex
 pdb|1UZW|A Chain A, Isopenicillin N Synthase With
           L-D-(A-Aminoadipoyl)-L-Cysteinyl-D-Isodehydrovaline
 pdb|1W03|A Chain A, Isopenicillin N Synthase Aminoadipoyl-Cysteinyl-Glycine-Fe
           Complex
 pdb|1W04|A Chain A, Isopenicillin N Synthase
           Aminoadipoyl-Cysteinyl-Glycine-Fe-No Complex
 pdb|1W05|A Chain A, Isopenicillin N Synthase Aminoadipoyl-Cysteinyl-Alanine-Fe
           Complex
 pdb|1W06|A Chain A, Isopenicillin N Synthase Aminoadipoyl-Cysteinyl-Alanine-Fe
           No Complex
 pdb|2BU9|A Chain A, Isopenicillin N Synthase Complexed With L-Aminoadipoyl-L-
           Cysteinyl-L-Hexafluorovaline
 pdb|1W3V|A Chain A, Isopenicillin N Synthase
           D-(L-A-Aminoadipoyl)-(3r)-Methyl-L- Cysteine
           D-A-Hydroxyisovaleryl Ester Complex (Anaerobic)
 pdb|1W3X|A Chain A, Isopenicillin N Synthase
           D-(L-A-Aminoadipoyl)-(3r)-Methyl-L- Cysteine
           D-A-Hydroxyisovaleryl Ester Complex (Oxygen Exposed 5
           Minutes 20 Bar)
 pdb|2IVI|B Chain B, Isopenicillin N Synthase From Aspergillus Nidulans
           (anaerobic Ac-methyl-cyclopropylglycine Fe Complex)
 pdb|2IVJ|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans
           (Anaerobic Ac-Cyclopropylglycine Fe Complex)
 pdb|1BK0|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Acv-Fe
           Complex)
 pdb|1BLZ|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans
           (Acv-Fe- No Complex)
 pdb|2JB4|A Chain A, Isopenicillin N Synthase With A 2-Thiabicycloheptan-6-One
           Product Analogue
 pdb|2VAU|A Chain A, Isopenicillin N Synthase With Substrate Analogue Acomp (
           Unexposed)
 pdb|2VBB|A Chain A, Isopenicillin N Synthase With Substrate Analogue Acomp (
           35minutes Oxygen Exposure)
 pdb|2VBD|A Chain A, Isopenicillin N Synthase With Substrate Analogue L,l,l-
           Acomp (unexposed)
 pdb|2VBP|A Chain A, Isopenicillin N Synthase With Substrate Analogue
           L,L,L-Acab (Unexposed)
 pdb|2VCM|A Chain A, Isopenicillin N Synthase With Substrate Analogue Asmcov
 pdb|2VE1|A Chain A, Isopenicillin N Synthase With Substrate Analogue Asmcov (
           Oxygen Exposed 1min 20bar)
 pdb|2WO7|A Chain A, Isopenicillin N Synthase With Substrate Analogue L,L,D-
           Acd2ab (Unexposed)
 pdb|2Y6F|A Chain A, Isopenicillin N Synthase With
           Ac-D-S-Methyl-3r-Methylcysteine
 pdb|2Y60|A Chain A, Isopenicillin N Synthase With Ac-D-Methionine
 pdb|2Y86|A Chain A, Isopenicillin N Synthase With Ac-O-Methyl-D-Threonine
 pdb|3ZKU|A Chain A, Isopenicillin N Synthase With Substrate Analogue Ahcv
          Length = 331

 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 113/288 (39%), Gaps = 46/288 (15%)

Query: 7   LPVIDLS------SPDRLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKF-FSL 59
           +P ID+S         ++  A+ I  A  D GFFY VNHG+  + +SQ   ++K+F  S+
Sbjct: 9   VPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGINVQRLSQ---KTKEFHMSI 65

Query: 60  QLEDKMKLA----RKEHRGYTALCDEILDPSSTSEGDPKESF-YIGP----------LEG 104
             E+K  LA     KEH+        +  P   +     ESF Y+ P           + 
Sbjct: 66  TPEEKWDLAIRAYNKEHQDQVRAGYYLSIPGKKA----VESFCYLNPNFTPDHPRIQAKT 121

Query: 105 TLSSMNQWPSLEILPTWRSTMEYYHQKVLSAGXXXXXXXXXXXXXXEDFFEKVGALDAPM 164
               +N WP     P ++   E Y+  V                  E+FF +    D  +
Sbjct: 122 PTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALLKGYALALGKEENFFARHFKPDDTL 181

Query: 165 AFLRLLHYPGELVSSNQEVCGASA----------HSDYGMITLLATDGVPGLQVCREKFN 214
           A + L+ YP   +    E    +A          H D  +IT+L    V  LQV      
Sbjct: 182 ASVVLIRYP--YLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQV-----E 234

Query: 215 QPRLWEDVPNIKGALIVNIGDMMERWTNCLFRSTLHRVMSSGQERYSV 262
               ++D+       ++N G  M   TN  +++ +HRV     ER S+
Sbjct: 235 TAAGYQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWVNAERQSL 282


>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
           Mycobacterium Tuberculosis In Complex With
           Tetrahydrobenzothiophene Ax20017
 pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
           Mycobacterium Tuberculosis In Complex With
           Tetrahydrobenzothiophene Ax20017
          Length = 681

 Score = 27.3 bits (59), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 162 APMAFLRLLHYPGELVSSNQEVCGASAHSDYGMITLLATDGVPGLQVC 209
           +P +FL  L+ PG++V+   EV G  AH   G I L     V G  V 
Sbjct: 64  SPYSFLPQLN-PGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVV 110


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.321    0.136    0.417 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,005,157
Number of Sequences: 62578
Number of extensions: 299375
Number of successful extensions: 685
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 660
Number of HSP's gapped (non-prelim): 12
length of query: 281
length of database: 14,973,337
effective HSP length: 98
effective length of query: 183
effective length of database: 8,840,693
effective search space: 1617846819
effective search space used: 1617846819
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)