Query 023505
Match_columns 281
No_of_seqs 119 out of 1107
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 07:58:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023505.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023505hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oox_A Putative 2OG-Fe(II) oxy 100.0 2.6E-70 8.8E-75 480.3 25.8 267 2-280 2-283 (312)
2 1odm_A Isopenicillin N synthas 100.0 1.4E-66 4.7E-71 459.9 27.0 263 4-280 6-300 (331)
3 1gp6_A Leucoanthocyanidin diox 100.0 9.4E-67 3.2E-71 464.7 26.0 261 5-280 45-320 (356)
4 1w9y_A 1-aminocyclopropane-1-c 100.0 4.4E-67 1.5E-71 460.0 20.1 255 6-280 3-265 (319)
5 3on7_A Oxidoreductase, iron/as 100.0 3.8E-65 1.3E-69 440.3 23.2 248 5-277 2-263 (280)
6 1dcs_A Deacetoxycephalosporin 100.0 8.1E-66 2.8E-70 451.1 17.8 251 5-279 3-277 (311)
7 2hbt_A EGL nine homolog 1; pro 96.0 0.18 6E-06 41.8 13.4 82 166-267 118-212 (247)
8 3dkq_A PKHD-type hydroxylase S 95.2 0.047 1.6E-06 45.2 6.9 79 165-268 99-195 (243)
9 2rg4_A Uncharacterized protein 90.3 5.4 0.00019 32.0 12.1 41 218-270 167-209 (216)
10 3itq_A Prolyl 4-hydroxylase, a 89.4 1.6 5.3E-05 35.3 8.1 102 139-268 95-212 (216)
11 2iuw_A Alkylated repair protei 88.1 1.7 5.9E-05 35.6 7.7 89 166-267 127-229 (238)
12 3s57_A Alpha-ketoglutarate-dep 87.7 1.4 4.9E-05 35.1 6.8 83 167-265 102-200 (204)
13 2jig_A Prolyl-4 hydroxylase; h 85.9 2.6 8.8E-05 34.0 7.5 47 219-269 170-218 (224)
14 3i3q_A Alpha-ketoglutarate-dep 84.5 3.7 0.00013 32.9 7.7 82 166-267 106-202 (211)
15 2fk5_A Fuculose-1-phosphate al 81.6 1.4 4.7E-05 35.1 4.0 50 6-55 117-175 (200)
16 2opi_A L-fuculose-1-phosphate 81.5 0.75 2.6E-05 37.0 2.5 36 6-41 125-160 (212)
17 3tht_A Alkylated DNA repair pr 79.3 4 0.00014 35.4 6.4 93 165-270 198-315 (345)
18 1e4c_P L-fuculose 1-phosphate 77.6 1.1 3.9E-05 35.9 2.4 36 6-41 122-157 (215)
19 1pvt_A Sugar-phosphate aldolas 76.3 1.4 4.8E-05 36.0 2.6 36 6-41 161-196 (238)
20 2v9l_A Rhamnulose-1-phosphate 73.2 1.5 5.2E-05 36.7 2.1 36 6-41 179-214 (274)
21 2dbn_A Hypothetical protein YB 69.7 1.6 5.6E-05 39.0 1.5 55 4-59 98-152 (461)
22 2irp_A Putative aldolase class 67.2 2.7 9.2E-05 33.5 2.3 36 5-41 138-176 (208)
23 1otj_A Alpha-ketoglutarate-dep 63.8 5.4 0.00018 33.2 3.6 49 6-57 17-65 (283)
24 3ocr_A Class II aldolase/adduc 62.5 3.9 0.00013 34.2 2.4 36 6-41 156-192 (273)
25 1oih_A Putative alkylsulfatase 59.0 7.8 0.00027 32.6 3.8 49 7-58 28-77 (301)
26 3o2g_A Gamma-butyrobetaine dio 54.8 7.9 0.00027 34.0 3.2 52 5-59 121-173 (388)
27 2da7_A Zinc finger homeobox pr 53.9 8.3 0.00028 25.0 2.3 43 113-155 8-50 (71)
28 1m5a_B Insulin B chain; alpha 52.4 17 0.00059 19.2 3.0 20 17-36 8-27 (30)
29 3pvj_A Alpha-ketoglutarate-dep 51.0 10 0.00035 31.5 3.2 50 6-58 15-64 (277)
30 3m4r_A Uncharacterized protein 49.3 7 0.00024 31.5 1.8 34 7-41 156-190 (222)
31 3r1j_A Alpha-ketoglutarate-dep 48.9 15 0.00051 31.0 3.9 51 6-59 21-72 (301)
32 3m0z_A Putative aldolase; MCSG 44.4 19 0.00064 29.1 3.4 41 14-55 169-210 (249)
33 2z7b_A MLR6791 protein; class 41.3 13 0.00044 30.9 2.2 36 6-41 157-201 (270)
34 3m6y_A 4-hydroxy-2-oxoglutarat 36.1 20 0.00069 29.3 2.5 41 14-55 192-233 (275)
35 1nx8_A CARC, carbapenem syntha 31.5 11 0.00038 31.0 0.3 35 21-58 29-63 (273)
36 3eat_X Pyoverdine biosynthesis 29.4 27 0.00093 29.1 2.4 47 9-58 33-81 (293)
37 3abf_A 4-oxalocrotonate tautom 28.5 53 0.0018 19.8 3.2 24 132-155 17-40 (64)
38 2x4k_A 4-oxalocrotonate tautom 28.2 62 0.0021 19.2 3.5 25 131-155 18-42 (63)
39 3dl3_A Tellurite resistance pr 27.2 39 0.0013 24.2 2.5 27 246-272 78-104 (119)
40 2rdq_A 1-deoxypentalenic acid 25.7 74 0.0025 26.0 4.4 36 22-58 22-57 (288)
41 3qy9_A DHPR, dihydrodipicolina 23.1 1.1E+02 0.0037 24.7 4.8 41 18-58 88-128 (243)
42 2opa_A Probable tautomerase YW 22.9 91 0.0031 18.4 3.5 25 131-155 15-39 (61)
43 1otf_A 4-oxalocrotonate tautom 22.5 92 0.0032 18.4 3.4 25 131-155 15-39 (62)
44 3ghf_A Septum site-determining 22.4 49 0.0017 23.6 2.3 36 9-44 51-86 (120)
45 2opw_A Phyhd1 protein; double- 21.8 84 0.0029 25.7 4.1 36 23-59 7-42 (291)
46 3ijp_A DHPR, dihydrodipicolina 21.6 95 0.0032 25.9 4.2 17 135-151 186-202 (288)
47 3kt7_A PKHD-type hydroxylase T 21.2 1.4E+02 0.0049 27.8 5.6 106 138-268 105-228 (633)
48 4f3y_A DHPR, dihydrodipicolina 21.0 94 0.0032 25.6 4.1 16 135-150 171-186 (272)
No 1
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=2.6e-70 Score=480.28 Aligned_cols=267 Identities=28% Similarity=0.427 Sum_probs=235.0
Q ss_pred CCCCCCcEEeCCC--cchHHHHHHHHHHHHhcceEEEEecCCCHHHHHHHHHHHHHhhcCCHHHHhhcccc-C-CCcccc
Q 023505 2 TEALQLPVIDLSS--PDRLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFSLQLEDKMKLARK-E-HRGYTA 77 (281)
Q Consensus 2 ~~~~~lPvIDl~~--~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~-~~Gy~~ 77 (281)
|+..+||||||+. .++.+++++|.+||++||||||+||||+.++++++++.+++||++|.|+|+++... . .+||++
T Consensus 2 m~~~~iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~ 81 (312)
T 3oox_A 2 MSTSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIP 81 (312)
T ss_dssp --CCSSCCEETHHHHHCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEEC
T ss_pred CCCCCCCeEEChHhcccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCcccccc
Confidence 3467899999984 35778899999999999999999999999999999999999999999999998763 3 899998
Q ss_pred ccccccCCCCCCCCCCceeeecCCC---CC---CCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCh
Q 023505 78 LCDEILDPSSTSEGDPKESFYIGPL---EG---TLSSMNQWPSLEILPTWRSTMEYYHQKVLSAGRRLIHLIALALNLNE 151 (281)
Q Consensus 78 ~~~e~~~~~~~~~~d~~E~~~~~p~---~~---~~~~~~~wP~~~~~~~f~~~~~~y~~~~~~~~~~ll~~l~~~lgl~~ 151 (281)
.+.|...... ..|++|.|++++. ++ ....+|.||.. +|+|++.+++|++.|.+++.+|+++|+++||+++
T Consensus 82 ~g~e~~~~~~--~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~--~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~ 157 (312)
T 3oox_A 82 FGVETAKGAD--HYDLKEFWHMGRDLPPGHRFRAHMADNVWPAE--IPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLER 157 (312)
T ss_dssp CCCCCSTTSC--SCCCCEEEEECCCCCTTCGGGGTSCCCCCCTT--STTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCT
T ss_pred ccceecCCCC--CCCceeeeEeecCCCcCCcchhccCCCCCCCc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCH
Confidence 8887664332 4699999999732 11 23457999987 4999999999999999999999999999999999
Q ss_pred hhhcccCCcCCcccceeecccCCCCCCCCCCccccccCccCCCccEEecCCCCceeEeeCCCCCCCceEEccCCCCcEEE
Q 023505 152 DFFEKVGALDAPMAFLRLLHYPGELVSSNQEVCGASAHSDYGMITLLATDGVPGLQVCREKFNQPRLWEDVPNIKGALIV 231 (281)
Q Consensus 152 ~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~H~D~~~lTll~~~~~~GLqv~~~~~~~~~~w~~v~~~~g~~iv 231 (281)
++|. +.+..+.+.||++||||++.+ ... +|+++|||+|+||||+||+++||||+.++|+ |++|+|.||++||
T Consensus 158 ~~f~--~~~~~~~~~lr~~~Ypp~~~~-~~~-~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~----W~~V~p~pg~~vV 229 (312)
T 3oox_A 158 DFFK--PTVQDGNSVLRLLHYPPIPKD-ATG-VRAGAHGDINTITLLLGAEEGGLEVLDRDGQ----WLPINPPPGCLVI 229 (312)
T ss_dssp TTTH--HHHTTCCCEEEEEEECCCSSC-CC---CEEEECCCSSEEEEECCTTSCEEEECTTSC----EEECCCCSSCEEE
T ss_pred HHHH--HHhcCCcceeeeEecCCCCCC-cCC-cCccceecCceEEEEeEcCcCceEEECCCCc----EEECCCCCCeEEE
Confidence 9998 777778899999999999875 233 8999999999999999999999999987765 9999999999999
Q ss_pred ehhhhHHHHhCCcccccceeecCC-----CCCeEEEEeeecCCCCCCCccCCCC
Q 023505 232 NIGDMMERWTNCLFRSTLHRVMSS-----GQERYSVIICFLSHLCFPHSNAFGC 280 (281)
Q Consensus 232 n~Gd~l~~~T~G~~ks~~HRV~~~-----~~~R~S~~~f~~p~~d~~~~~~~~~ 280 (281)
|+||+|++||||+|||++|||+++ +.+|||++||++|+.|++|.|+|+|
T Consensus 230 NiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~ 283 (312)
T 3oox_A 230 NIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNC 283 (312)
T ss_dssp EECHHHHHHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGG
T ss_pred EhHHHHHHHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccc
Confidence 999999999999999999999985 3479999999999999999999974
No 2
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=1.4e-66 Score=459.90 Aligned_cols=263 Identities=25% Similarity=0.363 Sum_probs=230.6
Q ss_pred CCCCcEEeCCC------cchHHHHHHHHHHHHhcceEEEEecCCCHHHHHHHHHHHHHh-hcCCHHHHhhccccCCCccc
Q 023505 4 ALQLPVIDLSS------PDRLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKF-FSLQLEDKMKLARKEHRGYT 76 (281)
Q Consensus 4 ~~~lPvIDl~~------~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~f-F~lp~e~K~~~~~~~~~Gy~ 76 (281)
..+||||||+. ..+.+++++|.+||++||||||+|||| +++++++.+++| |++|.|+|+++.. +||.
T Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~---~Gy~ 79 (331)
T 1odm_A 6 KANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI---RAYN 79 (331)
T ss_dssp BCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC---TTTC
T ss_pred CCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh---cCCC
Confidence 46799999984 135678999999999999999999999 999999999999 9999999999865 7998
Q ss_pred cccccccCCC----CCCCCCCceeeecCCCC---C-------CCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 023505 77 ALCDEILDPS----STSEGDPKESFYIGPLE---G-------TLSSMNQWPSLEILPTWRSTMEYYHQKVLSAGRRLIHL 142 (281)
Q Consensus 77 ~~~~e~~~~~----~~~~~d~~E~~~~~p~~---~-------~~~~~~~wP~~~~~~~f~~~~~~y~~~~~~~~~~ll~~ 142 (281)
+.+.+.+..+ .....||+|.|++++.. + .+..+|.||....+|+|++.+++|++.|.+++.+|+++
T Consensus 80 ~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~ 159 (331)
T 1odm_A 80 KEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALLKG 159 (331)
T ss_dssp TTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877654332 01256999999998432 1 13568999986335999999999999999999999999
Q ss_pred HHHHcCCChhhhcccCCcCCccccee--ecccC------C---CCCCCCCCccccccCccCCCccEEecCCCCceeEeeC
Q 023505 143 IALALNLNEDFFEKVGALDAPMAFLR--LLHYP------G---ELVSSNQEVCGASAHSDYGMITLLATDGVPGLQVCRE 211 (281)
Q Consensus 143 l~~~lgl~~~~~~~~~~~~~~~~~lr--~~~Yp------~---~~~~~~~~~~~~~~H~D~~~lTll~~~~~~GLqv~~~ 211 (281)
|+++||+++++|. +.+..+.+.|| ++||| | |+.+ +...+|+++|||+|+||||+||.++||||+++
T Consensus 160 la~~Lgl~~~~f~--~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~-~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~ 236 (331)
T 1odm_A 160 YALALGKEENFFA--RHFKPDDTLASVVLIRYPYLDPYPEAAIKTAA-DGTKLSFEWHEDVSLITVLYQSNVQNLQVETA 236 (331)
T ss_dssp HHHHTTSCTTTTG--GGCCTTTCCCEEEEEEECCCSSCCGGGCEECT-TSCEEEEEEECCSSSEEEEEECSSCCEEEEET
T ss_pred HHHHhCCCHHHHH--HHhcCcHHHHHHHHhhCCCcccccccccCCCc-cccccccccccCCCeEEEEeeCCCCCEEEEcC
Confidence 9999999999999 77888889999 99999 6 5443 22378999999999999999999999999987
Q ss_pred CCCCCCceEEccCCCCcEEEehhhhHHHHhCCcccccceeecCCCCCeEEEEeeecCCCCCCCccCCCC
Q 023505 212 KFNQPRLWEDVPNIKGALIVNIGDMMERWTNCLFRSTLHRVMSSGQERYSVIICFLSHLCFPHSNAFGC 280 (281)
Q Consensus 212 ~~~~~~~w~~v~~~~g~~ivn~Gd~l~~~T~G~~ks~~HRV~~~~~~R~S~~~f~~p~~d~~~~~~~~~ 280 (281)
+| |++|+|.||++|||+||+||+||||+|||+.|||++++.+|+|++||++|+.|++|.|+|++
T Consensus 237 ~g-----Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~R~Sia~F~~P~~d~~i~pl~~~ 300 (331)
T 1odm_A 237 AG-----YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWVNAERQSLPFFVNLGYDSVIDPFDPR 300 (331)
T ss_dssp TE-----EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEECCCSCEEEEEEEECCCTTCBCCCCCTT
T ss_pred CC-----eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCCCCCCEEEEEEEEcCCCCCEEeCCCcc
Confidence 65 99999999999999999999999999999999999888899999999999999999999985
No 3
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=9.4e-67 Score=464.74 Aligned_cols=261 Identities=22% Similarity=0.361 Sum_probs=227.7
Q ss_pred CCCcEEeCCCc------chHHHHHHHHHHHHhcceEEEEecCCCHHHHHHHHHHHHHhhcCCHHHHhhcccc---C-CCc
Q 023505 5 LQLPVIDLSSP------DRLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFSLQLEDKMKLARK---E-HRG 74 (281)
Q Consensus 5 ~~lPvIDl~~~------~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~---~-~~G 74 (281)
.+||||||+.. .+.+++++|.+||++||||||+||||+.++++++++.+++||++|.|+|+++... . ++|
T Consensus 45 ~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~G 124 (356)
T 1gp6_A 45 PQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQG 124 (356)
T ss_dssp CCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSE
T ss_pred CCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccc
Confidence 46999999842 2456899999999999999999999999999999999999999999999998653 3 788
Q ss_pred cccccccccCCCCCCCCCCceeeecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhh
Q 023505 75 YTALCDEILDPSSTSEGDPKESFYIGPLEGTLSSMNQWPSLEILPTWRSTMEYYHQKVLSAGRRLIHLIALALNLNEDFF 154 (281)
Q Consensus 75 y~~~~~e~~~~~~~~~~d~~E~~~~~p~~~~~~~~~~wP~~~~~~~f~~~~~~y~~~~~~~~~~ll~~l~~~lgl~~~~~ 154 (281)
|...+.+.. ....||+|.|+++........+|.||... |.|++.+++|++.|.+++.+|+++|+++||+++++|
T Consensus 125 y~~~~~~~~----~~~~d~kE~~~~~~~p~~~~~~~~wP~~~--~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f 198 (356)
T 1gp6_A 125 YGSKLANNA----SGQLEWEDYFFHLAYPEEKRDLSIWPKTP--SDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRL 198 (356)
T ss_dssp EECCCCCST----TCCCCSCEEEEEEEESGGGCCGGGSCCSS--TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHH
T ss_pred cCcCcccCC----CCCCChhheeeeecCCccccccccCCCcc--hhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 876544321 12579999999972211124678999864 899999999999999999999999999999999999
Q ss_pred cccCCcC---CcccceeecccCCCCCCCCCCccccccCccCCCccEEecCCCCceeEeeCCCCCCCceEEccCCCCcEEE
Q 023505 155 EKVGALD---APMAFLRLLHYPGELVSSNQEVCGASAHSDYGMITLLATDGVPGLQVCREKFNQPRLWEDVPNIKGALIV 231 (281)
Q Consensus 155 ~~~~~~~---~~~~~lr~~~Yp~~~~~~~~~~~~~~~H~D~~~lTll~~~~~~GLqv~~~~~~~~~~w~~v~~~~g~~iv 231 (281)
. +.+. ...+.||++|||||+.+ +..+|+++|||+|+||||+||.++||||+.++. |++|+|.||++||
T Consensus 199 ~--~~~~~~~~~~~~lrl~~YPp~~~~--~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~g~-----Wi~V~p~pgalvV 269 (356)
T 1gp6_A 199 E--KEVGGLEELLLQMKINYYPKCPQP--ELALGVEAHTDVSALTFILHNMVPGLQLFYEGK-----WVTAKCVPDSIVM 269 (356)
T ss_dssp H--HHTTHHHHCEEEEEEEEECCCSST--TTCCSEEEECCCSSEEEEEECSCCCEEEEETTE-----EEECCCCTTCEEE
T ss_pred H--HHhcccCCccceeeeeecCCCCCc--ccccCcCCccCCCeEEEEEEcCCCCeEEecCCc-----EEECcCCCCeEEE
Confidence 8 6666 47789999999999774 457899999999999999999999999996433 9999999999999
Q ss_pred ehhhhHHHHhCCcccccceeecCC-CCCeEEEEeeecCCCCC-CCccCCCC
Q 023505 232 NIGDMMERWTNCLFRSTLHRVMSS-GQERYSVIICFLSHLCF-PHSNAFGC 280 (281)
Q Consensus 232 n~Gd~l~~~T~G~~ks~~HRV~~~-~~~R~S~~~f~~p~~d~-~~~~~~~~ 280 (281)
|+||+|++||||+|||++|||+.+ +.+|||++||++|+.|+ +|.|+|+|
T Consensus 270 NiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~ 320 (356)
T 1gp6_A 270 HIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEM 320 (356)
T ss_dssp EECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGG
T ss_pred EeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhh
Confidence 999999999999999999999974 66999999999999999 99999874
No 4
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=4.4e-67 Score=460.05 Aligned_cols=255 Identities=27% Similarity=0.471 Sum_probs=224.3
Q ss_pred CCcEEeCCC---cchHHHHHHHHHHHHhcceEEEEecCCCHHHHHHHHHHHHHhhcCCHHHHhhccccCCCccccccccc
Q 023505 6 QLPVIDLSS---PDRLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFSLQLEDKMKLARKEHRGYTALCDEI 82 (281)
Q Consensus 6 ~lPvIDl~~---~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~Gy~~~~~e~ 82 (281)
+||||||+. .++.+++++|.+||++||||||+||||+.++++++++.+++||++|.|+|+++... .+||.+.+.+.
T Consensus 3 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~-~~Gy~~~~~e~ 81 (319)
T 1w9y_A 3 NFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA-SKALEGVQAEV 81 (319)
T ss_dssp CCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHTTCCCCG
T ss_pred CCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC-CCCCCcccccC
Confidence 699999984 34678899999999999999999999999999999999999999999999997644 46887664432
Q ss_pred cCCCCCCCCCCceeeecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhcccCCcC-
Q 023505 83 LDPSSTSEGDPKESFYIGPLEGTLSSMNQWPSLEILPTWRSTMEYYHQKVLSAGRRLIHLIALALNLNEDFFEKVGALD- 161 (281)
Q Consensus 83 ~~~~~~~~~d~~E~~~~~p~~~~~~~~~~wP~~~~~~~f~~~~~~y~~~~~~~~~~ll~~l~~~lgl~~~~~~~~~~~~- 161 (281)
...||+|.|+++... ...+|.||... |.|++.+++|++.|.+++.+|+++|+++||+++++|. +.+.
T Consensus 82 ------~~~d~ke~~~~~~~p--~~~~~~wP~~~--~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~--~~~~~ 149 (319)
T 1w9y_A 82 ------TDMDWESTFFLKHLP--ISNISEVPDLD--EEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLK--NAFYG 149 (319)
T ss_dssp ------GGCCCCEEEEEEEES--CCGGGGCTTCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHH--HHHHT
T ss_pred ------CCCChhhheeeecCC--cccccccccch--hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH--HHhcC
Confidence 146999999997211 12468899864 9999999999999999999999999999999999998 6554
Q ss_pred --CcccceeecccCCCCCCCCCCccccccCccCCCccEEecC-CCCceeEeeCCCCCCCceEEccCCCCcEEEehhhhHH
Q 023505 162 --APMAFLRLLHYPGELVSSNQEVCGASAHSDYGMITLLATD-GVPGLQVCREKFNQPRLWEDVPNIKGALIVNIGDMME 238 (281)
Q Consensus 162 --~~~~~lr~~~Yp~~~~~~~~~~~~~~~H~D~~~lTll~~~-~~~GLqv~~~~~~~~~~w~~v~~~~g~~ivn~Gd~l~ 238 (281)
...+.+|++|||||+.+ +...|+++|||+|+||||+|| .++||||+.++. |++|+|.||++|||+||+||
T Consensus 150 ~~~~~~~lrl~~YPp~~~~--~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~-----Wi~V~p~pgalvVNiGD~l~ 222 (319)
T 1w9y_A 150 SKGPNFGTKVSNYPPCPKP--DLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQ-----WIDVPPMRHSIVVNLGDQLE 222 (319)
T ss_dssp TTCCEEEEEEEECCCCSCG--GGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTE-----EEECCCCTTCEEEEECHHHH
T ss_pred cCCccceeEEEecCCCccc--ccccccccccCCCceEEEEecCCCCeeeEeeCCe-----EEEcccCCCcEEEEhHHHHH
Confidence 25678999999999764 557899999999999999995 799999986543 99999999999999999999
Q ss_pred HHhCCcccccceeecCC-CCCeEEEEeeecCCCCCCCccCCCC
Q 023505 239 RWTNCLFRSTLHRVMSS-GQERYSVIICFLSHLCFPHSNAFGC 280 (281)
Q Consensus 239 ~~T~G~~ks~~HRV~~~-~~~R~S~~~f~~p~~d~~~~~~~~~ 280 (281)
+||||+|||+.|||+.+ +.+|+|++||++|+.|++|.|+|++
T Consensus 223 ~~SnG~~kS~~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l 265 (319)
T 1w9y_A 223 VITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPAL 265 (319)
T ss_dssp HHTTTSSCCCCEEECCCSSSCCEEEEEEEECCTTCEECCCGGG
T ss_pred HHhCCeeecccceecCCCCCCceEEEEEecCCCCCeEeCchhh
Confidence 99999999999999985 5699999999999999999999874
No 5
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=3.8e-65 Score=440.27 Aligned_cols=248 Identities=29% Similarity=0.446 Sum_probs=208.9
Q ss_pred CCCcEEeCCCcchHHHHHHHHHHHHhcceEEEEecCCCHHHHHHHHHHHHHhhcCCHHHHhhccccC--CCcccccc-cc
Q 023505 5 LQLPVIDLSSPDRLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFSLQLEDKMKLARKE--HRGYTALC-DE 81 (281)
Q Consensus 5 ~~lPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~--~~Gy~~~~-~e 81 (281)
++||||||+..+ .+++|.+||++||||||+||||+.++++++++.+++||++ |+|+++.... .+||.+.+ .|
T Consensus 2 ~~IPvIDls~~~---~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY~~~~~~e 76 (280)
T 3on7_A 2 MKLETIDYRAAD---SAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDGFFPASISE 76 (280)
T ss_dssp --CCEEETTSTT---HHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCEEECCC---
T ss_pred CCCCEEECCChh---HHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCccccCcccc
Confidence 579999998643 4799999999999999999999999999999999999997 7898876543 89998876 45
Q ss_pred ccCCCCCCCCCCceeeecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCh--hh---hcc
Q 023505 82 ILDPSSTSEGDPKESFYIGPLEGTLSSMNQWPSLEILPTWRSTMEYYHQKVLSAGRRLIHLIALALNLNE--DF---FEK 156 (281)
Q Consensus 82 ~~~~~~~~~~d~~E~~~~~p~~~~~~~~~~wP~~~~~~~f~~~~~~y~~~~~~~~~~ll~~l~~~lgl~~--~~---~~~ 156 (281)
...... ..|++|.|++. .||..+ |.|++.+++|++.|.+++.+|+++|+++||++. .+ +.
T Consensus 77 ~~~~~~--~~D~kE~~~~~----------p~~~~p--~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~- 141 (280)
T 3on7_A 77 TAKGHT--VKDIKEYYHVY----------PWGRIP--DSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLP- 141 (280)
T ss_dssp -----C--CCCSCEEEEEC----------TTSCCC--GGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHH-
T ss_pred ccCCCC--cccHHHHHhcC----------CCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHH-
Confidence 443322 46999999886 266544 899999999999999999999999999998763 22 23
Q ss_pred cCCcCCc-ccceeecccCCCCCCCCCCccccccCccCCCccEEecCCCCceeEeeCCCCCCCceEEccCCCCcEEEehhh
Q 023505 157 VGALDAP-MAFLRLLHYPGELVSSNQEVCGASAHSDYGMITLLATDGVPGLQVCREKFNQPRLWEDVPNIKGALIVNIGD 235 (281)
Q Consensus 157 ~~~~~~~-~~~lr~~~Yp~~~~~~~~~~~~~~~H~D~~~lTll~~~~~~GLqv~~~~~~~~~~w~~v~~~~g~~ivn~Gd 235 (281)
+.+.+. .+.||++||||++.+.....+|+++|||+|+||||+||.++||||++++|+ |++|+|.||++|||+||
T Consensus 142 -~~~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~----W~~V~p~pg~~vVNiGD 216 (280)
T 3on7_A 142 -EMIANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDGS----WLDVPSDFGNIIINIGD 216 (280)
T ss_dssp -HHHTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTSC----EEECCCCTTCEEEEECH
T ss_pred -HHhcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCCC----EEECcCCCCEEEEEcCh
Confidence 333344 489999999999876444679999999999999999999999999987655 99999999999999999
Q ss_pred hHHHHhCCcccccceeecCC-----CCCeEEEEeeecCCCCCCCccC
Q 023505 236 MMERWTNCLFRSTLHRVMSS-----GQERYSVIICFLSHLCFPHSNA 277 (281)
Q Consensus 236 ~l~~~T~G~~ks~~HRV~~~-----~~~R~S~~~f~~p~~d~~~~~~ 277 (281)
+|++||||+|||++|||+++ ..+|||++||++|+.|++|+|.
T Consensus 217 ~l~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p~ 263 (280)
T 3on7_A 217 MLQEASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSER 263 (280)
T ss_dssp HHHHHTTTSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSSS
T ss_pred HHHHHhCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECCC
Confidence 99999999999999999985 3489999999999999999974
No 6
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=8.1e-66 Score=451.06 Aligned_cols=251 Identities=21% Similarity=0.280 Sum_probs=206.3
Q ss_pred CCCcEEeCCCcchHHHHHHHHHHHHhcceEEEEecCCCHHHHHHHHHHHHHhhcCC-HHHHhhccccC---CCccccccc
Q 023505 5 LQLPVIDLSSPDRLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFSLQ-LEDKMKLARKE---HRGYTALCD 80 (281)
Q Consensus 5 ~~lPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp-~e~K~~~~~~~---~~Gy~~~~~ 80 (281)
.+||||||+........++|.+||++||||||+||||+.++++++++.+++||++| .|+|+++.... .+||.+.+.
T Consensus 3 ~~iPvIDls~l~~~~~~~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~~~~~ 82 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLHQDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTGLES 82 (311)
T ss_dssp CCCCEEEHHHHHTTCSHHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEEEC--
T ss_pred CCCcEEEchhhcCCCHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCceeeccc
Confidence 57999999732111112389999999999999999999999999999999999999 99999987653 799999887
Q ss_pred ccc----CCCCCCCCCCceeeecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCC----Chh
Q 023505 81 EIL----DPSSTSEGDPKESFYIGPLEGTLSSMNQWPSLEILPTWRSTMEYYHQKVLSAGRRLIHLIALALNL----NED 152 (281)
Q Consensus 81 e~~----~~~~~~~~d~~E~~~~~p~~~~~~~~~~wP~~~~~~~f~~~~~~y~~~~~~~~~~ll~~l~~~lgl----~~~ 152 (281)
|.+ +.. ...||+|.|+++ ..+|.|| .|.|++.+++|++.|.+++.+|+++|+++||+ +++
T Consensus 83 e~~~~~~~~~--~~~d~~E~~~~~------~~~n~wP----~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~ 150 (311)
T 1dcs_A 83 ESTAQITNTG--SYSDYSMCYSMG------TADNLFP----SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVE 150 (311)
T ss_dssp -----------------CEEEEEC------SSSCCCS----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHH
T ss_pred cccccccCCC--CCCCcceeeecc------CCCCCCC----ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHh
Confidence 755 222 256999999998 3378999 39999999999999999999999999999999 888
Q ss_pred hhcccCCcCCcccceeecccCCCCCCCCCC--ccccccCccCCCccEEecC-CCCc---eeEeeCCCCCCCceEEccCCC
Q 023505 153 FFEKVGALDAPMAFLRLLHYPGELVSSNQE--VCGASAHSDYGMITLLATD-GVPG---LQVCREKFNQPRLWEDVPNIK 226 (281)
Q Consensus 153 ~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~--~~~~~~H~D~~~lTll~~~-~~~G---Lqv~~~~~~~~~~w~~v~~~~ 226 (281)
+|. +. .+.+|++||||++.+...+ .+|+++|||+|+||||+|| .++| |||+.+ | .|++|+|.|
T Consensus 151 ~f~--~~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~-g----~W~~V~p~p 219 (311)
T 1dcs_A 151 AFL--DC----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVG-G----AFTDLPYRP 219 (311)
T ss_dssp HHH--SC----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEET-T----EEEECCCCT
T ss_pred HHh--hc----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeC-C----EEEeCcCCC
Confidence 888 44 7889999999997653223 6789999999999999999 8999 999993 3 399999999
Q ss_pred CcEEEehhhhHHHHhCCcccccceeecCC------CCCeEEEEeeecCCCCCCCccCCC
Q 023505 227 GALIVNIGDMMERWTNCLFRSTLHRVMSS------GQERYSVIICFLSHLCFPHSNAFG 279 (281)
Q Consensus 227 g~~ivn~Gd~l~~~T~G~~ks~~HRV~~~------~~~R~S~~~f~~p~~d~~~~~~~~ 279 (281)
|++|||+||+||+||||+|||++|||+.+ +.+|+|++||++|+.|++|. +|+
T Consensus 220 g~lvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~ 277 (311)
T 1dcs_A 220 DAVLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPL 277 (311)
T ss_dssp TCEEEEECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHH
T ss_pred CeEEEEHHHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCc
Confidence 99999999999999999999999999985 45899999999999999998 764
No 7
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=95.98 E-value=0.18 Score=41.85 Aligned_cols=82 Identities=21% Similarity=0.231 Sum_probs=54.9
Q ss_pred ceeecccCCCCCCCCCCccccccCccCC-----CccEEec---CC-----CCceeEeeCCCCCCCceEEccCCCCcEEEe
Q 023505 166 FLRLLHYPGELVSSNQEVCGASAHSDYG-----MITLLAT---DG-----VPGLQVCREKFNQPRLWEDVPNIKGALIVN 232 (281)
Q Consensus 166 ~lr~~~Yp~~~~~~~~~~~~~~~H~D~~-----~lTll~~---~~-----~~GLqv~~~~~~~~~~w~~v~~~~g~~ivn 232 (281)
-+.+.+|++.. -....|.|.. .+|+++. +. -|.|.+++..+ +....|.|..|.+|++
T Consensus 118 e~~~~~Y~~~G-------~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~---~~~~~v~P~~grlv~F 187 (247)
T 2hbt_A 118 KAMVACYPGNG-------TGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGK---AQFADIEPKFDRLLFF 187 (247)
T ss_dssp CEEEEEECSSS-------CCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTC---SSCEEECCBTTEEEEE
T ss_pred eEEEEEecCCC-------CcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCC---CceEEEEcCCCEEEEE
Confidence 36678887521 1366677762 5776653 11 23477776543 2378999999999998
Q ss_pred hhhhHHHHhCCcccccceeecCCCCCeEEEEeeec
Q 023505 233 IGDMMERWTNCLFRSTLHRVMSSGQERYSVIICFL 267 (281)
Q Consensus 233 ~Gd~l~~~T~G~~ks~~HRV~~~~~~R~S~~~f~~ 267 (281)
-.+. -.+|.|......|+||+.+++
T Consensus 188 ~s~~----------~~~H~V~p~~~~R~sit~W~~ 212 (247)
T 2hbt_A 188 WSDR----------RNPHEVQPAYATRYAITVWYF 212 (247)
T ss_dssp ECST----------TCCEEECCBSSCEEEEEEEEE
T ss_pred ecCC----------CceeeeccCCCEEEEEEEEEc
Confidence 7431 168999886669999998765
No 8
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=95.17 E-value=0.047 Score=45.21 Aligned_cols=79 Identities=18% Similarity=0.118 Sum_probs=53.0
Q ss_pred cceeecccCCCCCCCCCCccccccCccCC-----------CccEEec--C----CCCceeEeeCCCCCCCceEEccCCCC
Q 023505 165 AFLRLLHYPGELVSSNQEVCGASAHSDYG-----------MITLLAT--D----GVPGLQVCREKFNQPRLWEDVPNIKG 227 (281)
Q Consensus 165 ~~lr~~~Yp~~~~~~~~~~~~~~~H~D~~-----------~lTll~~--~----~~~GLqv~~~~~~~~~~w~~v~~~~g 227 (281)
.-+++++|.+- --..+|.|.. .+|+++. + .-|.+.+....+ -..|+|..|
T Consensus 99 e~~~~~rY~~G--------~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~-----~~~V~P~~G 165 (243)
T 3dkq_A 99 YPPLFNRYQGG--------ETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYG-----QQSIKLSAG 165 (243)
T ss_dssp EEEEEEEECTT--------CEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTE-----EEEECCCTT
T ss_pred ccceEEEECCC--------CeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCC-----cEEEecCCC
Confidence 35788888752 1256666652 4565543 3 124466666554 478999999
Q ss_pred cEEEehhhhHHHHhCCcccccceeecC-CCCCeEEEEeeecC
Q 023505 228 ALIVNIGDMMERWTNCLFRSTLHRVMS-SGQERYSVIICFLS 268 (281)
Q Consensus 228 ~~ivn~Gd~l~~~T~G~~ks~~HRV~~-~~~~R~S~~~f~~p 268 (281)
.+|+.-. .++|+|.. ....|++++.+++-
T Consensus 166 ~~v~F~s------------~~lH~v~pV~~G~R~~~~~Wi~s 195 (243)
T 3dkq_A 166 SLVLYPS------------SSLHQVTPVLSGERTAAFMWLQS 195 (243)
T ss_dssp CEEEEET------------TSEEEECCEEEECEEEEEEEEEE
T ss_pred EEEEECC------------CCeEcCccccccCEEEEEEehhh
Confidence 9999742 36899987 34489999998873
No 9
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=90.28 E-value=5.4 Score=31.97 Aligned_cols=41 Identities=17% Similarity=0.099 Sum_probs=32.1
Q ss_pred ceEEccCCCCcEEEehhhhHHHHhCCcccccceeecC-C-CCCeEEEEeeecCCC
Q 023505 218 LWEDVPNIKGALIVNIGDMMERWTNCLFRSTLHRVMS-S-GQERYSVIICFLSHL 270 (281)
Q Consensus 218 ~w~~v~~~~g~~ivn~Gd~l~~~T~G~~ks~~HRV~~-~-~~~R~S~~~f~~p~~ 270 (281)
.+..|.|.+|.+||.-.. ..|+|.. . ..+|+||+|-+.+..
T Consensus 167 ~~~~i~P~~G~lvlFpS~------------l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 167 TFRSVAPKVGDVLLWESW------------LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp SEEEECCCTTEEEEEETT------------SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CeeEecCCCCeEEEECCC------------CEEeccCCCCCCCEEEEEEEeecCC
Confidence 467899999999998763 3799997 3 359999999988765
No 10
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=89.43 E-value=1.6 Score=35.28 Aligned_cols=102 Identities=20% Similarity=0.102 Sum_probs=59.3
Q ss_pred HHHHHHHHcCCChhhhcccCCcCCcccceeecccCCCCCCCCCCccccccCccCC-----------CccEEec--C-CCC
Q 023505 139 LIHLIALALNLNEDFFEKVGALDAPMAFLRLLHYPGELVSSNQEVCGASAHSDYG-----------MITLLAT--D-GVP 204 (281)
Q Consensus 139 ll~~l~~~lgl~~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~H~D~~-----------~lTll~~--~-~~~ 204 (281)
|.+-|+..+|++.+.. -.+++.+|.+-. ...+|.|.. .+|+++. | ..|
T Consensus 95 i~~Ri~~~~gl~~~~~----------E~lqv~~Y~~G~--------~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~G 156 (216)
T 3itq_A 95 IEKRISSIMNVPASHG----------EGLHILNYEVDQ--------QYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEG 156 (216)
T ss_dssp HHHHHHHHHTSCGGGB----------CCCEEEEECBTC--------CEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEE
T ss_pred HHHHHHHhcCceeccc----------cceeEEEeCCCC--------ccccccCCCcCCCcccCCceEEEEEEecccCCcC
Confidence 3444444567764332 247788886421 245666653 3676664 2 223
Q ss_pred ceeEeeCCCCCCCceEEccCCCCcEEEehhhhHHHHhCCc-ccccceeecC-CCCCeEEEEeeecC
Q 023505 205 GLQVCREKFNQPRLWEDVPNIKGALIVNIGDMMERWTNCL-FRSTLHRVMS-SGQERYSVIICFLS 268 (281)
Q Consensus 205 GLqv~~~~~~~~~~w~~v~~~~g~~ivn~Gd~l~~~T~G~-~ks~~HRV~~-~~~~R~S~~~f~~p 268 (281)
|=-+.... -+.|.|..|.+|+.-.- ..+|. =..++|+|.. ....|+++..+++-
T Consensus 157 GeT~Fp~~------~~~V~P~~G~al~f~~~----~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~ 212 (216)
T 3itq_A 157 GETFFPKL------NLSVHPRKGMAVYFEYF----YQDQSLNELTLHGGAPVTKGEKWIATQWVRR 212 (216)
T ss_dssp CCEEETTT------TEEECCCTTCEEEEECC----CSSHHHHHTTCEEECCEEESCEEEEEEEEES
T ss_pred ceeEecCC------CCEEecCCCeEEEEecc----CCCCCCCCccccccceeccccEEEEEeeEec
Confidence 43333332 38899999998886531 11222 2468999987 33479999888764
No 11
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=88.15 E-value=1.7 Score=35.57 Aligned_cols=89 Identities=16% Similarity=0.134 Sum_probs=53.4
Q ss_pred ceeecccCCCCCCCCCCccccccCccCC--------CccEEecCCCCceeEeeCCCC------CCCceEEccCCCCcEEE
Q 023505 166 FLRLLHYPGELVSSNQEVCGASAHSDYG--------MITLLATDGVPGLQVCREKFN------QPRLWEDVPNIKGALIV 231 (281)
Q Consensus 166 ~lr~~~Yp~~~~~~~~~~~~~~~H~D~~--------~lTll~~~~~~GLqv~~~~~~------~~~~w~~v~~~~g~~iv 231 (281)
.+-+|+|.+- .-++++|.|-. +.+|-+.. ..-+.+...... .....+.+...+|.++|
T Consensus 127 ~~LvN~Y~~G-------~d~i~~H~D~~~~~~~~~~IaslSLG~-~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllv 198 (238)
T 2iuw_A 127 SLLCNLYRNE-------KDSVDWHSDDEPSLGRCPIIASLSFGA-TRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLI 198 (238)
T ss_dssp EEEEEEECST-------TCCEEEECCCCGGGCSSCCEEEEEEES-CEEEEEEECCC--------CCCEEEEEECTTCEEE
T ss_pred EEEEEEECCC-------CCceeCCcCChhhcCCCCcEEEEECCC-CEEEEEeccCCccccCcccCCceEEEEcCCCCEEE
Confidence 4568888753 22688999853 22232321 123444433210 00248999999999999
Q ss_pred ehhhhHHHHhCCcccccceeecCCCCCeEEEEeeec
Q 023505 232 NIGDMMERWTNCLFRSTLHRVMSSGQERYSVIICFL 267 (281)
Q Consensus 232 n~Gd~l~~~T~G~~ks~~HRV~~~~~~R~S~~~f~~ 267 (281)
+-|++=..|..|.-+.. .....|+|+.|-.-
T Consensus 199 M~G~~r~~w~H~I~~~~-----~~~~~RIsLTfR~v 229 (238)
T 2iuw_A 199 MEGATQADWQHRVPKEY-----HSREPRVNLTFRTV 229 (238)
T ss_dssp EEETHHHHEEEEECCCS-----SCCCCEEEEEEECC
T ss_pred EChhhhCccEecCCCcC-----CCCCCEEEEEeeec
Confidence 99987666655443211 13568999999753
No 12
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=87.66 E-value=1.4 Score=35.13 Aligned_cols=83 Identities=11% Similarity=0.091 Sum_probs=50.9
Q ss_pred eeecccCCCCCCCCCCccccccCccCC--------CccEEecCCCCceeEeeCCCC-----CCCceEEccCCCCcEEEeh
Q 023505 167 LRLLHYPGELVSSNQEVCGASAHSDYG--------MITLLATDGVPGLQVCREKFN-----QPRLWEDVPNIKGALIVNI 233 (281)
Q Consensus 167 lr~~~Yp~~~~~~~~~~~~~~~H~D~~--------~lTll~~~~~~GLqv~~~~~~-----~~~~w~~v~~~~g~~ivn~ 233 (281)
+-+|+|.+-. -+++.|.|-. +.+|-+.. ..-+.+...... ..+..+.+...+|.++|+-
T Consensus 102 ~LvN~Y~~G~-------d~i~~H~D~~~~~~~~~~IasvSLG~-~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~ 173 (204)
T 3s57_A 102 VLINRYKDGS-------DHICEHRDDERELAPGSPIASVSFGA-SRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMN 173 (204)
T ss_dssp EEEEEESSTT-------CCEEEECCCCTTBCTTCCEEEEEEES-CEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEE
T ss_pred eEEEEECCCC-------CcccceecChhhccCCCcEEEEECCC-ceEEEEEEcCCCccccccCCceEEEECCCCCEEEEC
Confidence 4588897532 2688999872 11222221 233445433210 0123789999999999999
Q ss_pred hhhHHHHhCCcccccceeecC---CCCCeEEEEee
Q 023505 234 GDMMERWTNCLFRSTLHRVMS---SGQERYSVIIC 265 (281)
Q Consensus 234 Gd~l~~~T~G~~ks~~HRV~~---~~~~R~S~~~f 265 (281)
|++=..|. |.|-. ....|+|+.|-
T Consensus 174 g~~q~~w~--------H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 174 HPTNTHWY--------HSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp TTHHHHEE--------EEECCCTTCCSCEEEEEEE
T ss_pred chhhheeE--------eeccccCCCCCCEEEEEee
Confidence 98766665 44443 23589999985
No 13
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=85.93 E-value=2.6 Score=33.96 Aligned_cols=47 Identities=15% Similarity=0.084 Sum_probs=33.8
Q ss_pred eEEccCCCCcEEEehhhhHHHHhCCcc-cccceeecCC-CCCeEEEEeeecCC
Q 023505 219 WEDVPNIKGALIVNIGDMMERWTNCLF-RSTLHRVMSS-GQERYSVIICFLSH 269 (281)
Q Consensus 219 w~~v~~~~g~~ivn~Gd~l~~~T~G~~-ks~~HRV~~~-~~~R~S~~~f~~p~ 269 (281)
-+.|.|..|.+|+.-- ...+|.. ..++|+|... ...|+++..+++-+
T Consensus 170 ~~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 170 GLAVKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHVA 218 (224)
T ss_dssp SEEECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEESS
T ss_pred ceEEecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEcC
Confidence 3889999999888753 1223433 5789999873 34899999988754
No 14
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=84.51 E-value=3.7 Score=32.91 Aligned_cols=82 Identities=15% Similarity=0.036 Sum_probs=50.0
Q ss_pred ceeecccCCCCCCCCCCccccccCccC-C------CccEEecCCCCceeEeeCCCCCCCceEEccCCCCcEEEehhhhHH
Q 023505 166 FLRLLHYPGELVSSNQEVCGASAHSDY-G------MITLLATDGVPGLQVCREKFNQPRLWEDVPNIKGALIVNIGDMME 238 (281)
Q Consensus 166 ~lr~~~Yp~~~~~~~~~~~~~~~H~D~-~------~lTll~~~~~~GLqv~~~~~~~~~~w~~v~~~~g~~ivn~Gd~l~ 238 (281)
.+-+|+|.+ +. +++.|.|- . +.+|-+.. ..-+.+..... ++....+...+|+++|.-|++-
T Consensus 106 ~~LvN~Y~~-------G~-~i~~H~D~~e~~~~~pI~svSLG~-~~~f~f~~~~~--~~~~~~i~L~~GsllvM~G~~r- 173 (211)
T 3i3q_A 106 ACLINRYAP-------GA-KLSLHQDKDEPDLRAPIVSVSLGL-PAIFQFGGLKR--NDPLKRLLLEHGDVVVWGGESR- 173 (211)
T ss_dssp EEEEEEECT-------TC-CEEEECCCCCSCTTSCEEEEEEES-CEEEEECCSST--TSCCEEEEECTTCEEEECGGGT-
T ss_pred EEEEEEEcC-------CC-CcccccCCCccccCCCEEEEECCC-CeEEEEecccC--CCceEEEECCCCCEEEECchHH-
Confidence 356888874 23 79999993 2 12232321 13344443211 1348899999999999988752
Q ss_pred HHhCCcccccceeecCC--------CCCeEEEEeeec
Q 023505 239 RWTNCLFRSTLHRVMSS--------GQERYSVIICFL 267 (281)
Q Consensus 239 ~~T~G~~ks~~HRV~~~--------~~~R~S~~~f~~ 267 (281)
. -.|.|... +..|+|+.|-.-
T Consensus 174 ~--------~~H~I~~~~~~~~p~~~~~RIsLTFR~~ 202 (211)
T 3i3q_A 174 L--------FYHGIQPLKAGFHPLTIDCRYNLTFRQA 202 (211)
T ss_dssp T--------CCEEECCCCCCCBTTTBTCEEEEEEECC
T ss_pred c--------eEeccCcccCCcCCCCCCCEEEEEeeec
Confidence 1 24777652 236999999643
No 15
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=81.58 E-value=1.4 Score=35.07 Aligned_cols=50 Identities=20% Similarity=0.255 Sum_probs=38.4
Q ss_pred CCcEE-eCCCcchHHHHHHHHHHHHhcceEEEEecCC---C-----HHHHHHHHHHHHH
Q 023505 6 QLPVI-DLSSPDRLSTAKSIRQACIDYGFFYLVNHGV---E-----EELISQMFNESKK 55 (281)
Q Consensus 6 ~lPvI-Dl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi---~-----~~~~~~~~~~~~~ 55 (281)
.||++ ++......++++.+.+++.+.-.+.|.|||+ . ++.+++++..+..
T Consensus 117 ~ip~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~~~~G~~~~~~~~~~eA~~~~~~ 175 (200)
T 2fk5_A 117 EVPVLAPKTVSATEEAALSVAEALREHRACLLRGHGAFAVGLKEAPEEALLEAYGLMTT 175 (200)
T ss_dssp CEEEECCSCCSSSHHHHHHHHHHHHHCSEEEETTTEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred CceEecCCCCCCcHHHHHHHHHHhCcCCEEEECCCCcEEEeCCCCCcCcHHHHHHHHHH
Confidence 68999 8887777788999999999999999999994 3 1455565554443
No 16
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=81.50 E-value=0.75 Score=36.96 Aligned_cols=36 Identities=31% Similarity=0.459 Sum_probs=32.0
Q ss_pred CCcEEeCCCcchHHHHHHHHHHHHhcceEEEEecCC
Q 023505 6 QLPVIDLSSPDRLSTAKSIRQACIDYGFFYLVNHGV 41 (281)
Q Consensus 6 ~lPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 41 (281)
.||++++...+..++++.+.+++.+.-.+.|.|||+
T Consensus 125 ~v~~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPGSPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 699999987677788999999999889999999994
No 17
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=79.29 E-value=4 Score=35.39 Aligned_cols=93 Identities=17% Similarity=0.129 Sum_probs=59.9
Q ss_pred cceeecccCCCCCCCCCCccccccCccCC------CccEEecCCCCceeEeeCCCCCCCceEEccCCCCcEEEehhhhHH
Q 023505 165 AFLRLLHYPGELVSSNQEVCGASAHSDYG------MITLLATDGVPGLQVCREKFNQPRLWEDVPNIKGALIVNIGDMME 238 (281)
Q Consensus 165 ~~lr~~~Yp~~~~~~~~~~~~~~~H~D~~------~lTll~~~~~~GLqv~~~~~~~~~~w~~v~~~~g~~ivn~Gd~l~ 238 (281)
..+-+|+|.+ +. ++++|.|.. +.+|-+. ...-+.+...++ .++.+...+|+++|+-|+.-.
T Consensus 198 n~~lvN~Y~~-------G~-~I~~H~D~~~~~~~~I~slSLG-~~~~f~f~~~~~----~~~~l~L~~gsLlvM~G~~r~ 264 (345)
T 3tht_A 198 DQMTINQYEP-------GQ-GIPAHIDTHSAFEDEIVSLSLG-SEIVMDFKHPDG----IAVPVMLPRRSLLVMTGESRY 264 (345)
T ss_dssp SEEEEEEECT-------TC-CEEEECCCTTTBCSCEEEEEES-SCEEEEEECTTS----CEEEEEECTTEEEEECTHHHH
T ss_pred CEEEEEEecC-------CC-CEeeccCCchhcCCeEEEEECC-CceeEEEccCCC----ceEEEEcCCCcEEEEChHHhh
Confidence 3566888974 22 789999984 2223221 123355554443 389999999999999999988
Q ss_pred HHhCCcccccceeec-------------------CCCCCeEEEEeeecCCC
Q 023505 239 RWTNCLFRSTLHRVM-------------------SSGQERYSVIICFLSHL 270 (281)
Q Consensus 239 ~~T~G~~ks~~HRV~-------------------~~~~~R~S~~~f~~p~~ 270 (281)
.|..|.-+-...-+- .+...|+|+.|-.-++.
T Consensus 265 ~w~H~I~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~ 315 (345)
T 3tht_A 265 LWTHGITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQT 315 (345)
T ss_dssp TSEEEECCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSS
T ss_pred ceEccCCcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCC
Confidence 887765443333221 12347999999875543
No 18
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=77.64 E-value=1.1 Score=35.94 Aligned_cols=36 Identities=14% Similarity=0.180 Sum_probs=31.8
Q ss_pred CCcEEeCCCcchHHHHHHHHHHHHhcceEEEEecCC
Q 023505 6 QLPVIDLSSPDRLSTAKSIRQACIDYGFFYLVNHGV 41 (281)
Q Consensus 6 ~lPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 41 (281)
.||++++...+..++++.+.+++.+.-.+.|.|||+
T Consensus 122 ~ip~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATFGTRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 689999987777788999999999889999999994
No 19
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=76.31 E-value=1.4 Score=36.01 Aligned_cols=36 Identities=14% Similarity=0.239 Sum_probs=31.9
Q ss_pred CCcEEeCCCcchHHHHHHHHHHHHhcceEEEEecCC
Q 023505 6 QLPVIDLSSPDRLSTAKSIRQACIDYGFFYLVNHGV 41 (281)
Q Consensus 6 ~lPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 41 (281)
.||++++......++++++.+++.+.-.+.|.|||+
T Consensus 161 ~v~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 161 GISVVEFEKPGSVELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp CCEEECCCSTTCHHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CceEecCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 689999987667788999999999999999999995
No 20
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=73.22 E-value=1.5 Score=36.68 Aligned_cols=36 Identities=14% Similarity=0.171 Sum_probs=32.1
Q ss_pred CCcEEeCCCcchHHHHHHHHHHHHhcceEEEEecCC
Q 023505 6 QLPVIDLSSPDRLSTAKSIRQACIDYGFFYLVNHGV 41 (281)
Q Consensus 6 ~lPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 41 (281)
.||++++..++..++++.+.+++.+.-.+.|.|||+
T Consensus 179 ~v~v~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMVPGTDAIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCCSSSHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCCCCCHHHHHHHHHHHccCCEEEEcCCCc
Confidence 689999987777788999999999999999999995
No 21
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=69.69 E-value=1.6 Score=39.04 Aligned_cols=55 Identities=11% Similarity=0.064 Sum_probs=39.9
Q ss_pred CCCCcEEeCCCcchHHHHHHHHHHHHhcceEEEEecCCCHHHHHHHHHHHHHhhcC
Q 023505 4 ALQLPVIDLSSPDRLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFSL 59 (281)
Q Consensus 4 ~~~lPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~l 59 (281)
..-||.|||++-....+.+...+.+++.|++.|+|. |+.+......+.+.+|.+.
T Consensus 98 ~~~iP~i~f~di~~~~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~~ 152 (461)
T 2dbn_A 98 DAVWPVLSYADIKAGHVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLDR 152 (461)
T ss_dssp CCSSCEEEHHHHHHTCCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHHH
T ss_pred CCCcceecHHHhcCCCCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHHh
Confidence 457999999742222122445577889999999987 7998888888887777654
No 22
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=67.22 E-value=2.7 Score=33.47 Aligned_cols=36 Identities=17% Similarity=0.268 Sum_probs=29.7
Q ss_pred CCCcEEeCCCcchHHHHHHHHHHHHhcc---eEEEEecCC
Q 023505 5 LQLPVIDLSSPDRLSTAKSIRQACIDYG---FFYLVNHGV 41 (281)
Q Consensus 5 ~~lPvIDl~~~~~~~~~~~l~~A~~~~G---ff~l~nhgi 41 (281)
..||++++. ++.+++++.+.+++.+.+ .+.|.|||+
T Consensus 138 ~~vp~~~~~-~g~~~La~~i~~~l~~~~~~~avll~nHG~ 176 (208)
T 2irp_A 138 IKIPIFPNE-QNIPLLAKEVENYFKTSEDKYGFLIRGHGL 176 (208)
T ss_dssp CEEEEECCC-SCHHHHHHHHHHHHHHCSCCSCEEETTTEE
T ss_pred cceeeecCC-CCHHHHHHHHHHHHhcCCCceEEEEcCCCC
Confidence 378999885 566788999999998875 899999994
No 23
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=63.83 E-value=5.4 Score=33.18 Aligned_cols=49 Identities=14% Similarity=0.191 Sum_probs=34.6
Q ss_pred CCcEEeCCCcchHHHHHHHHHHHHhcceEEEEecCCCHHHHHHHHHHHHHhh
Q 023505 6 QLPVIDLSSPDRLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFF 57 (281)
Q Consensus 6 ~lPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF 57 (281)
+|+-||++..-..+..++|.+++.++|++.+.+..++++.. .+.++.|-
T Consensus 17 ei~gvdl~~~l~~~~~~~l~~~l~~~Gvv~frg~~~~~~~~---~~~~~~~G 65 (283)
T 1otj_A 17 QISGADLTRPLSDNQFEQLYHAVLRHQVVFLRDQAITPQQQ---RALAQRFG 65 (283)
T ss_dssp EEESCCSSSCCCHHHHHHHHHHHHHHSEEEECSCCCCHHHH---HHHHHTTS
T ss_pred EEECCCcCccCCHHHHHHHHHHHHHCCEEEECCCCCCHHHH---HHHHHHhC
Confidence 45567776533455688999999999999999998866543 34445543
No 24
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=62.46 E-value=3.9 Score=34.20 Aligned_cols=36 Identities=19% Similarity=0.213 Sum_probs=30.8
Q ss_pred CCcEEeCCCcc-hHHHHHHHHHHHHhcceEEEEecCC
Q 023505 6 QLPVIDLSSPD-RLSTAKSIRQACIDYGFFYLVNHGV 41 (281)
Q Consensus 6 ~lPvIDl~~~~-~~~~~~~l~~A~~~~Gff~l~nhgi 41 (281)
.||++|+.... ..++++++.+++.+.-.+.|.|||+
T Consensus 156 ~v~~~~y~~~~~~~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 156 RVAYHGYEGIALDLSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TEEEECCCCSSCCHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CEEEECCCCCCCCHHHHHHHHHHhCcCCEEEEcCCce
Confidence 68999997654 5677899999999999999999994
No 25
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=59.01 E-value=7.8 Score=32.55 Aligned_cols=49 Identities=12% Similarity=0.144 Sum_probs=35.0
Q ss_pred CcEEeCCCcchHHHHHHHHHHHHhcceEEEEecC-CCHHHHHHHHHHHHHhhc
Q 023505 7 LPVIDLSSPDRLSTAKSIRQACIDYGFFYLVNHG-VEEELISQMFNESKKFFS 58 (281)
Q Consensus 7 lPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhg-i~~~~~~~~~~~~~~fF~ 58 (281)
|+-||++..-..+..++|.+++.++|++.+++.. ++++ ...+.++.|-.
T Consensus 28 i~gvdl~~~l~~~~~~~l~~~l~~~Gvv~fRg~~~l~~~---~~~~~~~~fG~ 77 (301)
T 1oih_A 28 IRGVKLSPDLDAATVEAIQAALVRHKVIFFRGQTHLDDQ---SQEGFAKLLGE 77 (301)
T ss_dssp EESCCCCTTCCHHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHTTSC
T ss_pred EeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHHhCC
Confidence 4556776533455688999999999999999988 8753 44455555544
No 26
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=54.84 E-value=7.9 Score=34.02 Aligned_cols=52 Identities=19% Similarity=0.119 Sum_probs=38.3
Q ss_pred CCCcEEeCCCc-chHHHHHHHHHHHHhcceEEEEecCCCHHHHHHHHHHHHHhhcC
Q 023505 5 LQLPVIDLSSP-DRLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFSL 59 (281)
Q Consensus 5 ~~lPvIDl~~~-~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~l 59 (281)
.++|.||++.. ..++..+++.+++.++|++.+.+.++.++. ..+.++.|-.+
T Consensus 121 ~~~~~~~~~~~l~~d~~~~~~~~~l~~~Gvv~frg~~~~~~~---~~~~a~~~G~l 173 (388)
T 3o2g_A 121 LQLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPGE---VSKLGKRMGFL 173 (388)
T ss_dssp CCCCEEEHHHHHHCHHHHHHHHHHHHHHSEEEEECCCSSTTH---HHHHHHHHSCC
T ss_pred CCCCccCHHHHhcCHHHHHHHHHHHHhcCEEEEeCCCCCHHH---HHHHHHHhCCC
Confidence 37899999742 235668889999999999999999887543 34455555543
No 27
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.92 E-value=8.3 Score=24.98 Aligned_cols=43 Identities=14% Similarity=0.251 Sum_probs=35.5
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhc
Q 023505 113 PSLEILPTWRSTMEYYHQKVLSAGRRLIHLIALALNLNEDFFE 155 (281)
Q Consensus 113 P~~~~~~~f~~~~~~y~~~~~~~~~~ll~~l~~~lgl~~~~~~ 155 (281)
|..+.+.+.+..++.||..-.+-...-+..||..+||+.+.+.
T Consensus 8 ~~~~~~k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVr 50 (71)
T 2da7_A 8 SPINPYKDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVK 50 (71)
T ss_dssp CCCCSSTHHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHH
Confidence 4344457789999999999888888888999999999988765
No 28
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=52.39 E-value=17 Score=19.15 Aligned_cols=20 Identities=25% Similarity=0.539 Sum_probs=16.8
Q ss_pred hHHHHHHHHHHHHhcceEEE
Q 023505 17 RLSTAKSIRQACIDYGFFYL 36 (281)
Q Consensus 17 ~~~~~~~l~~A~~~~Gff~l 36 (281)
..++++.+.-.|.+-||||-
T Consensus 8 Gs~LVdaL~~vCgdRGF~~~ 27 (30)
T 1m5a_B 8 GSHLVEALYLVCGERGFFYT 27 (30)
T ss_dssp THHHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHHHhccCccccC
Confidence 45678889999999999983
No 29
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=50.99 E-value=10 Score=31.52 Aligned_cols=50 Identities=20% Similarity=0.258 Sum_probs=36.4
Q ss_pred CCcEEeCCCcchHHHHHHHHHHHHhcceEEEEecCCCHHHHHHHHHHHHHhhc
Q 023505 6 QLPVIDLSSPDRLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFS 58 (281)
Q Consensus 6 ~lPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 58 (281)
+|.-|||+..-.++..++|.+++.++|++.+.+..++++ ...+.++.|-.
T Consensus 15 ei~gvdl~~~l~~~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~fG~ 64 (277)
T 3pvj_A 15 QISGVDISRDISAEERDAIEQALLQHQVLFLRDQPINPE---QQARFAARFGD 64 (277)
T ss_dssp EEESCCTTSCCCHHHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGGSC
T ss_pred EEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCC
Confidence 455578875334566889999999999999999998764 33455666554
No 30
>3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum}
Probab=49.27 E-value=7 Score=31.48 Aligned_cols=34 Identities=21% Similarity=0.225 Sum_probs=28.5
Q ss_pred CcEEeCCCcchHHHHHHHHHHHHhc-ceEEEEecCC
Q 023505 7 LPVIDLSSPDRLSTAKSIRQACIDY-GFFYLVNHGV 41 (281)
Q Consensus 7 lPvIDl~~~~~~~~~~~l~~A~~~~-Gff~l~nhgi 41 (281)
||++++....- ++++++.+++.+. -.+.|.|||+
T Consensus 156 v~~~~y~~~g~-ela~~i~~~l~~~~~avlL~nHG~ 190 (222)
T 3m4r_A 156 VVVLPYIPPGF-TLAKEVMNCFKKGIDGIVLRKHGL 190 (222)
T ss_dssp EEEECCCCSSH-HHHHHHHHHCCTTCSEEEETTTEE
T ss_pred ceecCCcCCcH-HHHHHHHHHHhcCCCEEEECCCCC
Confidence 88999986665 7899999999864 7888999994
No 31
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=48.90 E-value=15 Score=30.97 Aligned_cols=51 Identities=10% Similarity=0.168 Sum_probs=36.8
Q ss_pred CCcEEeCCCcchHHHHHHHHHHHHhcceEEEEec-CCCHHHHHHHHHHHHHhhcC
Q 023505 6 QLPVIDLSSPDRLSTAKSIRQACIDYGFFYLVNH-GVEEELISQMFNESKKFFSL 59 (281)
Q Consensus 6 ~lPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~~fF~l 59 (281)
+|+-|||+..-.++..++|.+++.++|++.+.+. .++.+ ...+.++.|-.+
T Consensus 21 ei~gvdl~~~L~d~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~l 72 (301)
T 3r1j_A 21 RVDGVRLGGDLDDATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGTP 72 (301)
T ss_dssp EEESCCCSTTCCHHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSCB
T ss_pred eEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCCc
Confidence 4555788743355668899999999999999999 78765 344555666544
No 32
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=44.37 E-value=19 Score=29.10 Aligned_cols=41 Identities=17% Similarity=0.328 Sum_probs=31.2
Q ss_pred CcchHHHHHHHHHHHHhcceEEEEecC-CCHHHHHHHHHHHHH
Q 023505 14 SPDRLSTAKSIRQACIDYGFFYLVNHG-VEEELISQMFNESKK 55 (281)
Q Consensus 14 ~~~~~~~~~~l~~A~~~~Gff~l~nhg-i~~~~~~~~~~~~~~ 55 (281)
.....++.+.+.+||.+.|| ++.-.| |+.+-+..+++.+.+
T Consensus 169 Gl~~l~E~~avAka~a~~g~-~lEPTGGIdl~N~~~I~~i~l~ 210 (249)
T 3m0z_A 169 GLKHRAEFEAVAKACAAHDF-WLEPTGGIDLENYSEILKIALD 210 (249)
T ss_dssp TTTTHHHHHHHHHHHHHTTC-EEEEBSSCCTTTHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCc-eECCCCCccHhhHHHHHHHHHH
Confidence 44566778999999999999 777765 887766666665543
No 33
>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti}
Probab=41.33 E-value=13 Score=30.89 Aligned_cols=36 Identities=17% Similarity=0.302 Sum_probs=29.0
Q ss_pred CCcEEeCCC---------cchHHHHHHHHHHHHhcceEEEEecCC
Q 023505 6 QLPVIDLSS---------PDRLSTAKSIRQACIDYGFFYLVNHGV 41 (281)
Q Consensus 6 ~lPvIDl~~---------~~~~~~~~~l~~A~~~~Gff~l~nhgi 41 (281)
.||++++.. ....++++.+.+++.+.-.+.|.|||+
T Consensus 157 ~vpv~~y~~~~g~~~~~~~~s~ela~~ia~~l~~~~avLL~nHG~ 201 (270)
T 2z7b_A 157 SVPVYEIRDKHGDETDLFGGSPDVCADIAESLGSQTVVLMARHGV 201 (270)
T ss_dssp CCCEECTHHHHCSCSCCCCCSHHHHHHHHHHHTTSSEEEETTTEE
T ss_pred CCceecccccCCcccccccCCHHHHHHHHHHhccCCEEEEcCCce
Confidence 689998741 124678999999999989999999994
No 34
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=36.13 E-value=20 Score=29.26 Aligned_cols=41 Identities=17% Similarity=0.347 Sum_probs=31.4
Q ss_pred CcchHHHHHHHHHHHHhcceEEEEecC-CCHHHHHHHHHHHHH
Q 023505 14 SPDRLSTAKSIRQACIDYGFFYLVNHG-VEEELISQMFNESKK 55 (281)
Q Consensus 14 ~~~~~~~~~~l~~A~~~~Gff~l~nhg-i~~~~~~~~~~~~~~ 55 (281)
.....++.+.+.+||.+.|| ++.-.| |+.+-+..+++.+.+
T Consensus 192 Gl~~leEl~avAkAca~~g~-~lEPTGGIdl~Nf~~I~~i~l~ 233 (275)
T 3m6y_A 192 GLAHEEEYRAVAKACAEEGF-ALEPTGGIDKENFETIVRIALE 233 (275)
T ss_dssp TTTTHHHHHHHHHHHHHHTC-EEEEBSSCCTTTHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCc-eECCCCCccHhHHHHHHHHHHH
Confidence 34566778999999999999 777765 887777777766544
No 35
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=31.49 E-value=11 Score=30.98 Aligned_cols=35 Identities=11% Similarity=0.278 Sum_probs=26.5
Q ss_pred HHHHHHHHHhcceEEEEecCCCHHHHHHHHHHHHHhhc
Q 023505 21 AKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFS 58 (281)
Q Consensus 21 ~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 58 (281)
.++|.+++.++|++.+.+..++++ ...+.++.|-.
T Consensus 29 ~~~l~~~l~~~G~v~~rg~~~~~~---~~~~~~~~~G~ 63 (273)
T 1nx8_A 29 TETIKNLLMRQGFVVVKNLDIDSD---TFRDIYSAYGT 63 (273)
T ss_dssp HHHHHHHHHHHCEEEECSCCCCHH---HHHHHHHTTSE
T ss_pred HHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCC
Confidence 788999999999999999988754 34444555543
No 36
>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}
Probab=29.38 E-value=27 Score=29.14 Aligned_cols=47 Identities=9% Similarity=-0.040 Sum_probs=32.0
Q ss_pred EEeCCCcchHHHHHHHHHHHHhcceEEEEecC-C-CHHHHHHHHHHHHHhhc
Q 023505 9 VIDLSSPDRLSTAKSIRQACIDYGFFYLVNHG-V-EEELISQMFNESKKFFS 58 (281)
Q Consensus 9 vIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhg-i-~~~~~~~~~~~~~~fF~ 58 (281)
=||++..-.++..+.|.+++.++|++.+.+.. + +++ ...+.++.|-.
T Consensus 33 gvdl~~~l~~~~~~~L~~~l~~~gvv~fRgq~~l~~~~---~~~~~a~~fG~ 81 (293)
T 3eat_X 33 PGRPGMHVGELPAQWLKGLARSHHLLLLRGFAAFADAE---SLTRYCHDFGE 81 (293)
T ss_dssp ESSTTCBGGGSCHHHHHHHHHHHSEEEECSCBCCSSHH---HHHHHHHHHSC
T ss_pred CCCCCcCcCHHHHHHHHHHHHHhCEEEECCCCCCCCHH---HHHHHHHHhCC
Confidence 36776432344578899999999999999987 5 444 34455555544
No 37
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=28.55 E-value=53 Score=19.77 Aligned_cols=24 Identities=17% Similarity=0.030 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHcCCChhhhc
Q 023505 132 VLSAGRRLIHLIALALNLNEDFFE 155 (281)
Q Consensus 132 ~~~~~~~ll~~l~~~lgl~~~~~~ 155 (281)
-.+++..|.+++++.||.+++++.
T Consensus 17 k~~l~~~lt~~l~~~lg~~~~~v~ 40 (64)
T 3abf_A 17 KRELVRRLTEMASRLLGEPYEEVR 40 (64)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred HHHHHHHHHHHHHHHhCCCcccEE
Confidence 467888889999999999987654
No 38
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=28.22 E-value=62 Score=19.16 Aligned_cols=25 Identities=4% Similarity=0.028 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHcCCChhhhc
Q 023505 131 KVLSAGRRLIHLIALALNLNEDFFE 155 (281)
Q Consensus 131 ~~~~~~~~ll~~l~~~lgl~~~~~~ 155 (281)
.-.+++..|.+++++.||.+++.+.
T Consensus 18 ~k~~l~~~l~~~l~~~lg~p~~~v~ 42 (63)
T 2x4k_A 18 QLKNLVSEVTDAVEKTTGANRQAIH 42 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGCE
T ss_pred HHHHHHHHHHHHHHHHhCcCcccEE
Confidence 4567888899999999999987654
No 39
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=27.17 E-value=39 Score=24.21 Aligned_cols=27 Identities=11% Similarity=0.052 Sum_probs=20.1
Q ss_pred cccceeecCCCCCeEEEEeeecCCCCC
Q 023505 246 RSTLHRVMSSGQERYSVIICFLSHLCF 272 (281)
Q Consensus 246 ks~~HRV~~~~~~R~S~~~f~~p~~d~ 272 (281)
+-.+|||...+.-|+.+-|||.|..-+
T Consensus 78 Pq~wHrVe~sdD~~f~leFyc~~~dyf 104 (119)
T 3dl3_A 78 PQYWHRIELSDDAQFNINFWSDQDKSG 104 (119)
T ss_dssp TTCEEEEEECTTCEEEEEEEECC----
T ss_pred CCceEEEEECCCeEEEEEEEECchHHh
Confidence 446899997677999999999998643
No 40
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=25.67 E-value=74 Score=25.96 Aligned_cols=36 Identities=11% Similarity=0.335 Sum_probs=29.6
Q ss_pred HHHHHHHHhcceEEEEecCCCHHHHHHHHHHHHHhhc
Q 023505 22 KSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFS 58 (281)
Q Consensus 22 ~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 58 (281)
+++.+.+.+.||+.|.+- ++++.++++.+.+..+++
T Consensus 22 ~~~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~~~ 57 (288)
T 2rdq_A 22 AALDSFYEEHGYLFLRNV-LDRDLVKTVAEQMREGLV 57 (288)
T ss_dssp HHHHHHHHHHSEEEECSC-SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEEeCC-CCHHHHHHHHHHHHHHHH
Confidence 346788889999999975 789999999988887654
No 41
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=23.11 E-value=1.1e+02 Score=24.72 Aligned_cols=41 Identities=5% Similarity=0.157 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHhcceEEEEecCCCHHHHHHHHHHHHHhhc
Q 023505 18 LSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFS 58 (281)
Q Consensus 18 ~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 58 (281)
++..++|.++|++.++|+--|-++.-.++.++.+.+..+|.
T Consensus 88 ~e~~~~l~~aa~~~~v~~a~N~S~Gv~l~~~~~~~aa~~l~ 128 (243)
T 3qy9_A 88 EKLLNKLDELSQNMPVFFSANMSYGVHALTKILAAAVPLLD 128 (243)
T ss_dssp HHHHHHHHHHTTTSEEEECSSCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCEEEECCccHHHHHHHHHHHHHHHhcC
Confidence 44567788888888888877877776777777766666553
No 42
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=22.93 E-value=91 Score=18.40 Aligned_cols=25 Identities=4% Similarity=-0.012 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHcCCChhhhc
Q 023505 131 KVLSAGRRLIHLIALALNLNEDFFE 155 (281)
Q Consensus 131 ~~~~~~~~ll~~l~~~lgl~~~~~~ 155 (281)
.-.+++..|.+++.+.||.+++...
T Consensus 15 qk~~l~~~i~~~l~~~lg~~~~~v~ 39 (61)
T 2opa_A 15 QKRNLVEKVTEAVKETTGASEEKIV 39 (61)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGCE
T ss_pred HHHHHHHHHHHHHHHHhCcCcCeEE
Confidence 4467888899999999999976543
No 43
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=22.47 E-value=92 Score=18.41 Aligned_cols=25 Identities=12% Similarity=0.036 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHcCCChhhhc
Q 023505 131 KVLSAGRRLIHLIALALNLNEDFFE 155 (281)
Q Consensus 131 ~~~~~~~~ll~~l~~~lgl~~~~~~ 155 (281)
.-.+++..|.+++.+.||.+++...
T Consensus 15 ~k~~l~~~i~~~l~~~lg~p~~~v~ 39 (62)
T 1otf_A 15 QKETLIRQVSEAMANSLDAPLERVR 39 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCE
T ss_pred HHHHHHHHHHHHHHHHhCcCcccEE
Confidence 4467888899999999999976543
No 44
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=22.43 E-value=49 Score=23.62 Aligned_cols=36 Identities=14% Similarity=0.204 Sum_probs=22.7
Q ss_pred EEeCCCcchHHHHHHHHHHHHhcceEEEEecCCCHH
Q 023505 9 VIDLSSPDRLSTAKSIRQACIDYGFFYLVNHGVEEE 44 (281)
Q Consensus 9 vIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~ 44 (281)
|||++..........|.+.|+++|+..+--.|...+
T Consensus 51 VlDl~~l~~~~dl~~L~~~l~~~gl~~vGV~g~~~~ 86 (120)
T 3ghf_A 51 VINVSGLESPVNWPELHKIVTSTGLRIIGVSGCKDA 86 (120)
T ss_dssp EEEEEECCSSCCHHHHHHHHHTTTCEEEEEESCCCH
T ss_pred EEEccccCChHHHHHHHHHHHHcCCEEEEEeCCCcH
Confidence 567763211122566888888899888776665544
No 45
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=21.77 E-value=84 Score=25.67 Aligned_cols=36 Identities=19% Similarity=0.129 Sum_probs=29.7
Q ss_pred HHHHHHHhcceEEEEecCCCHHHHHHHHHHHHHhhcC
Q 023505 23 SIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFSL 59 (281)
Q Consensus 23 ~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~l 59 (281)
+..+.+.+.||+.|.+- ++++.++++.+.+..+++.
T Consensus 7 e~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~~~~ 42 (291)
T 2opw_A 7 SQLQKFQQDGFLVLEGF-LSAEECVAMQQRIGEIVAE 42 (291)
T ss_dssp HHHHHHHHHSEEEETTS-SCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCEEEecCC-CCHHHHHHHHHHHHHHHhh
Confidence 45578889999999975 7899999999988887653
No 46
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=21.55 E-value=95 Score=25.89 Aligned_cols=17 Identities=18% Similarity=-0.097 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHcCCCh
Q 023505 135 AGRRLIHLIALALNLNE 151 (281)
Q Consensus 135 ~~~~ll~~l~~~lgl~~ 151 (281)
.|.+|.+.|++.++...
T Consensus 186 TA~~la~~i~~~~~~~~ 202 (288)
T 3ijp_A 186 TALLLGQAAAEGRNIML 202 (288)
T ss_dssp HHHHHHHHHHHHTTSCH
T ss_pred HHHHHHHHHHHHhCCCc
Confidence 45666777888777653
No 47
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=21.19 E-value=1.4e+02 Score=27.78 Aligned_cols=106 Identities=11% Similarity=0.104 Sum_probs=59.9
Q ss_pred HHHHHHHHHcCCChhhhcccCCcCCcccceeecccCCCCCCCCCCccccccCccC-C--CccEEec----C------CCC
Q 023505 138 RLIHLIALALNLNEDFFEKVGALDAPMAFLRLLHYPGELVSSNQEVCGASAHSDY-G--MITLLAT----D------GVP 204 (281)
Q Consensus 138 ~ll~~l~~~lgl~~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~H~D~-~--~lTll~~----~------~~~ 204 (281)
.++..|++..|++. +. +...-+.+.+|.+- -....|.|. + .+|+++. + .-|
T Consensus 105 ~Fr~~Ls~iTGi~~--Ls------g~~~D~~~a~Y~~G--------~fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GG 168 (633)
T 3kt7_A 105 QYRDFFGYVTKAGK--LS------GSKTDMSINTYTKG--------CHLLTHDDVIGSRRISFILYLPDPDRKWKSHYGG 168 (633)
T ss_dssp HHHHHHHHHHTCCC--CC------SSCCCEEEEEECTT--------CEEEEECCCCTTEEEEEEEECSCTTSCCCGGGBC
T ss_pred HHHHHHHHHhCCcc--cC------CCceeEEEEEeCCC--------CeeeecCCCCCCeEEEEEEEcCCCCCCCCccCCc
Confidence 34566777777642 11 01112456667532 247778884 1 3555542 2 124
Q ss_pred ceeEeeCCCC---CCCceEEccCCCCcEEEehhhhHHHHhCCcccccceeecC--CCCCeEEEEeeecC
Q 023505 205 GLQVCREKFN---QPRLWEDVPNIKGALIVNIGDMMERWTNCLFRSTLHRVMS--SGQERYSVIICFLS 268 (281)
Q Consensus 205 GLqv~~~~~~---~~~~w~~v~~~~g~~ivn~Gd~l~~~T~G~~ks~~HRV~~--~~~~R~S~~~f~~p 268 (281)
-|++++.+.. .......|.|.-|.++++.-. -+ ..+|.|.. ++..|+||+-+++-
T Consensus 169 eL~Lyd~d~~~~P~~d~~~~I~P~fNrLV~F~vs------p~---~S~H~V~eV~~~~~RlSItGWF~~ 228 (633)
T 3kt7_A 169 GLRLFPSILPNVPHSDPSAKLVPQFNQIAFFKVL------PG---FSFHDXEEVKVDKHRLSIQGWYHI 228 (633)
T ss_dssp CEEECCEEETTEECSSCSEEECCCTTEEEEEECC------TT---TCCEEECCBCSSCCEEEEEEEEEC
T ss_pred eEEEecCCCcCCCCCCceEEEecCCCeEEEEEcC------CC---CCcCCCCccCCCCCEEEEEEEecc
Confidence 4888765410 013378899999998887421 01 35787754 47799999876653
No 48
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=20.97 E-value=94 Score=25.59 Aligned_cols=16 Identities=19% Similarity=0.003 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHcCCC
Q 023505 135 AGRRLIHLIALALNLN 150 (281)
Q Consensus 135 ~~~~ll~~l~~~lgl~ 150 (281)
.|.+|.+.|++.++..
T Consensus 171 TA~~la~~i~~~~~~~ 186 (272)
T 4f3y_A 171 TALMMGETIAAATGRS 186 (272)
T ss_dssp HHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHhCcc
Confidence 4566677788777655
Done!