Query 023507
Match_columns 281
No_of_seqs 234 out of 1784
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 08:00:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023507.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023507hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tnx_A Papain; hydrolase, cyto 100.0 9.5E-73 3.2E-77 521.8 30.2 235 38-281 57-362 (363)
2 3qj3_A Cathepsin L-like protei 100.0 5.6E-72 1.9E-76 513.1 28.1 242 36-281 11-331 (331)
3 3qt4_A Cathepsin-L-like midgut 100.0 4.4E-71 1.5E-75 506.2 25.7 238 38-281 18-329 (329)
4 1pci_A Procaricain; zymogen, h 100.0 3.5E-70 1.2E-74 499.6 27.7 237 39-281 14-321 (322)
5 1by8_A Protein (procathepsin K 100.0 5.4E-70 1.9E-74 496.9 26.8 236 41-281 5-314 (314)
6 2c0y_A Procathepsin S; proenzy 100.0 1E-69 3.5E-74 495.4 24.7 236 40-281 5-315 (315)
7 1cs8_A Human procathepsin L; p 100.0 2.8E-69 9.6E-74 492.6 26.4 233 42-281 7-316 (316)
8 2o6x_A Procathepsin L1, secret 100.0 6.1E-69 2.1E-73 489.2 22.9 230 45-281 3-306 (310)
9 1xkg_A DER P I, major mite fec 100.0 7E-64 2.4E-68 455.7 20.4 222 46-281 7-302 (312)
10 3pdf_A Cathepsin C, dipeptidyl 100.0 2.5E-59 8.5E-64 442.4 17.7 214 62-279 135-433 (441)
11 3hhi_A Cathepsin B-like cystei 100.0 2.2E-57 7.4E-62 415.3 13.2 213 65-280 2-311 (325)
12 3pbh_A Procathepsin B; thiol p 100.0 3.5E-55 1.2E-59 399.7 17.1 197 74-280 11-313 (317)
13 3p5u_A Actinidin; SAD, cystein 100.0 1.2E-51 4.1E-56 358.5 17.9 145 136-281 1-217 (220)
14 3kwz_A Cathepsin K; enzyme inh 100.0 1.2E-51 4E-56 357.4 17.6 144 136-281 1-215 (215)
15 3i06_A Cruzipain; autocatalyti 100.0 1.4E-51 4.7E-56 357.0 16.0 144 136-281 1-214 (215)
16 1ppo_A Protease omega; hydrola 100.0 2.8E-51 9.5E-56 355.3 17.8 144 136-281 1-215 (216)
17 1iwd_A Ervatamin B; cysteine p 100.0 2.6E-51 9E-56 355.2 17.6 144 136-281 1-214 (215)
18 3ovx_A Cathepsin S; hydrolase, 100.0 1.8E-51 6.1E-56 356.9 16.6 145 136-281 2-218 (218)
19 1cqd_A Protein (protease II); 100.0 3.4E-51 1.2E-55 356.0 17.8 145 135-281 2-217 (221)
20 1yal_A Chymopapain; hydrolase, 100.0 4E-51 1.4E-55 354.8 17.9 144 136-281 1-215 (218)
21 1s4v_A Cysteine endopeptidase; 100.0 7E-51 2.4E-55 355.8 18.5 147 135-281 1-219 (229)
22 1m6d_A Cathepsin F, catsf; pap 100.0 5.2E-51 1.8E-55 353.2 17.4 144 136-281 1-213 (214)
23 3f75_A Toxopain-2, cathepsin L 100.0 2.4E-51 8.2E-56 357.5 14.8 147 135-281 6-224 (224)
24 3ioq_A CMS1MS2; caricaceae, cy 100.0 8.8E-51 3E-55 351.5 17.1 140 136-281 1-211 (213)
25 8pch_A Cathepsin H; hydrolase, 100.0 4.5E-51 1.5E-55 354.9 15.0 144 136-280 1-217 (220)
26 2xu3_A Cathepsin L1; hydrolase 100.0 2.1E-50 7.2E-55 350.7 18.2 146 136-281 1-220 (220)
27 2cio_A Papain; hydrolase/inhib 100.0 3.5E-50 1.2E-54 347.5 17.6 140 136-281 1-211 (212)
28 3f5v_A DER P 1 allergen; aller 100.0 1.5E-50 5.1E-55 352.1 15.0 144 135-281 9-222 (222)
29 2fo5_A Cysteine proteinase EP- 100.0 4.3E-50 1.5E-54 356.9 18.0 148 134-281 2-224 (262)
30 1o0e_A Ervatamin C; plant cyst 100.0 4.3E-50 1.5E-54 345.9 17.0 140 136-281 1-207 (208)
31 3u8e_A Papain-like cysteine pr 100.0 1.8E-50 6.2E-55 351.6 14.0 145 136-281 1-219 (222)
32 2bdz_A Mexicain; cysteine prot 100.0 8.3E-50 2.8E-54 345.6 17.2 140 136-281 1-211 (214)
33 2oul_A Falcipain 2; cysteine p 100.0 1.1E-49 3.6E-54 350.8 16.9 146 135-281 17-240 (241)
34 2b1m_A SPE31; papain-like, sug 100.0 1.4E-49 4.8E-54 350.9 17.3 145 135-281 1-224 (246)
35 3bwk_A Cysteine protease falci 100.0 1.5E-49 5.3E-54 350.2 16.3 146 135-281 19-242 (243)
36 3qsd_A Cathepsin B-like peptid 100.0 3.5E-48 1.2E-52 343.7 14.0 145 135-280 2-252 (254)
37 3cbj_A Cathepsin B; cathepsin 100.0 5.6E-47 1.9E-51 338.0 13.2 145 135-280 6-256 (266)
38 1deu_A Procathepsin X; cystein 100.0 1.9E-46 6.4E-51 336.3 15.7 144 134-280 34-274 (277)
39 2wbf_X Serine-repeat antigen p 100.0 3.1E-41 1.1E-45 300.7 15.9 141 138-278 9-255 (265)
40 3ois_A Cysteine protease; alph 100.0 7.9E-39 2.7E-43 288.8 9.4 169 87-266 12-272 (291)
41 2e01_A Cysteine proteinase 1; 100.0 2.1E-33 7E-38 264.7 12.7 80 136-215 53-160 (457)
42 2cb5_A Protein (bleomycin hydr 100.0 1.2E-32 4.1E-37 259.2 14.1 81 135-215 47-157 (453)
43 3pw3_A Aminopeptidase C; bleom 100.0 7.7E-32 2.6E-36 248.9 11.9 69 147-215 21-100 (383)
44 3f75_P Toxopain-2, cathepsin L 99.8 2.4E-19 8.2E-24 137.1 10.2 77 37-114 15-91 (106)
45 2l95_A Crammer, LP06209P; cyst 99.7 3.1E-18 1.1E-22 124.9 7.3 68 44-113 7-77 (80)
46 1pxv_A Cysteine protease; hydr 97.3 0.00066 2.3E-08 55.3 7.6 100 152-266 25-162 (183)
47 1cv8_A Staphopain; cysteine pr 97.2 0.0021 7.3E-08 52.2 9.3 92 152-252 16-144 (174)
48 1x9y_A Cysteine proteinase; ha 97.0 0.0024 8.2E-08 57.3 8.7 100 152-266 201-338 (367)
49 3bb7_A Interpain A; cysteine p 24.7 57 0.0019 28.8 3.7 35 225-265 264-298 (321)
50 3erv_A Putative C39-like pepti 22.1 49 0.0017 27.9 2.7 13 225-237 175-187 (236)
No 1
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=100.00 E-value=9.5e-73 Score=521.80 Aligned_cols=235 Identities=46% Similarity=0.868 Sum_probs=208.1
Q ss_pred CChhHHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEecccCCCCCHHHHHHHHcCCCCCCCC
Q 023507 38 THEQSVVEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKEGNRTYKLGTNQFSDLTNDEFRALYTGYKMPSPS 117 (281)
Q Consensus 38 ~~~~~~~~~f~~f~~~~~K~Y~s~~E~~~R~~~F~~Nl~~I~~~N~~~~~s~~~g~N~FsDlt~eE~~~~~~g~~~~~~~ 117 (281)
..++.+.++|++|+++|+|+|.+.+|+.+|+++|++|+++|++||++ +.+|++|+|+|+|||.+||++++++..++...
T Consensus 57 ~s~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~-~~sy~~g~N~FaDlT~eEf~~~~~~~~~~~~~ 135 (363)
T 3tnx_A 57 TSTERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKK-NNSYWLGLNVFADMSNDEFKEKYTGSIAGNYT 135 (363)
T ss_dssp SCHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTTS-CCSEEECSCTTTTSCHHHHHHHHSCSSCSCCC
T ss_pred cCHHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHcC-CCCeEEeccccccCCHHHHHHHhccccccccc
Confidence 45788999999999999999999999999999999999999999984 67999999999999999999999876553322
Q ss_pred CCCCCCccccccCCCCCCCCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhcCCCCC
Q 023507 118 HRSTTSSTFKYQNLSMTDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNN 197 (281)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~ 197 (281)
........... ....+||++||||++|+|+||||||.||||||||+++++|+++++++++.+.||+|+|+||+. .+.
T Consensus 136 ~~~~~~~~~~~--~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSeQ~LvdC~~-~~~ 212 (363)
T 3tnx_A 136 TTELSYEEVLN--DGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSEQELLDCDR-RSY 212 (363)
T ss_dssp CSSSSSSCCCC--CSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSC
T ss_pred ccccccccccC--cccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCHHHHhcccC-CCC
Confidence 11111111111 112379999999999999999999999999999999999999999999999999999999998 688
Q ss_pred CCCCCcchhhHHHHHhcC--------------------------------------------------------------
Q 023507 198 GCLGGSREKAFAYIIQNQ-------------------------------------------------------------- 215 (281)
Q Consensus 198 gC~GG~~~~a~~~~~~~g-------------------------------------------------------------- 215 (281)
||+||.+..|++|+.++|
T Consensus 213 GC~GG~~~~a~~yi~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~e~~l~~~v~~gPvsvai~a~~~~F 292 (363)
T 3tnx_A 213 GCNGGYPWSALQLVAQYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDF 292 (363)
T ss_dssp TTBCCCHHHHHHHHHHTCBCBTTTSCCCSSCCCCCGGGGCSCSBCCCEEEEECSSCHHHHHHHHTTSCEEEEECCCSHHH
T ss_pred CCCCCChHHHHhHHHhcCccccccCCCcCcCCCcccCCCCCceeeccceEEcchhhHHHHHHHHHcCCcEEEEEecchhh
Confidence 999999999999999888
Q ss_pred -----ceecCccCCCCCceEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcCC----CccccCCceeeeeC
Q 023507 216 -----GIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE----GLCGIGTRSSYPLA 281 (281)
Q Consensus 216 -----Giy~~~~~~~~~Hav~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~~~~~ 281 (281)
|||.++|....+|||+|||||+ +|||||||||+.|||+|||||+|+. |.|||++.|+||+.
T Consensus 293 ~~Y~sGVy~~~~~~~lnHaV~iVGyG~-----~YWIVKNSWGt~WGe~GY~rI~Rg~~~~~~~CGI~~~a~yPik 362 (363)
T 3tnx_A 293 QLYRGGIFVGPCGNKVDHAVAAVGYGP-----NYILIRNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVK 362 (363)
T ss_dssp HTEEEEEECCCCCSCCCEEEEEEEEET-----TEEEEECSBCTTSTBTTEEEEECCSCCSSCGGGTTSCEEEEEC
T ss_pred hCCCCCEECCCCCCCCCeEEEEEEcCC-----CcEEEEeCCCCccccCcEEEEEcCCCCCCCcCCccceeeeccc
Confidence 9999999889999999999985 5999999999999999999999984 56999999999983
No 2
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=100.00 E-value=5.6e-72 Score=513.05 Aligned_cols=242 Identities=40% Similarity=0.767 Sum_probs=211.9
Q ss_pred CCCChhHHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHhcC---CCCceEEecccCCCCCHHHHHHHHcCCC
Q 023507 36 RSTHEQSVVEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKE---GNRTYKLGTNQFSDLTNDEFRALYTGYK 112 (281)
Q Consensus 36 ~~~~~~~~~~~f~~f~~~~~K~Y~s~~E~~~R~~~F~~Nl~~I~~~N~~---~~~s~~~g~N~FsDlt~eE~~~~~~g~~ 112 (281)
+..++..++.+|++|+++|+|+|.+.+|+.+|+++|++|+++|++||++ ++.+|++|+|+|+|||.|||++++++..
T Consensus 11 ~~~~~~~l~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~~~~~ 90 (331)
T 3qj3_A 11 SALPSTFVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEMKAYTHGLI 90 (331)
T ss_dssp --CCHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHHHHHHSCCC
T ss_pred CCCCCHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHHHHHhcccc
Confidence 3467788999999999999999999889999999999999999999985 5789999999999999999999988766
Q ss_pred CCCCCCCCCCCccccccC----CCCCCCCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCC--CCCCCHH
Q 023507 113 MPSPSHRSTTSSTFKYQN----LSMTDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGN--LIQLSEQ 186 (281)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~----~~~~~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~--~~~lS~q 186 (281)
++...... ...+.... ....+||++||||++|+|+||||||.||||||||+++++|+++++++++ .+.||+|
T Consensus 91 ~~~~~~~~--~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~~LSeQ 168 (331)
T 3qj3_A 91 MPADLHKN--GIPIKTREDLGLNASVRYPASFDWRDQGMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVSEQ 168 (331)
T ss_dssp CCSSTTTT--CEEECSGGGGTCCSSCCCCSSEEGGGGTCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCCCBCHH
T ss_pred cccccccc--CcccccccccccccccCCCcceecccCCccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCcccCcCHH
Confidence 53221110 11111110 0113799999999999999999999999999999999999999999998 8999999
Q ss_pred HHhhhcCCCCCCCCCCcchhhHHHHHhc-C--------------------------------------------------
Q 023507 187 QLLDCSTNGNNGCLGGSREKAFAYIIQN-Q-------------------------------------------------- 215 (281)
Q Consensus 187 ~l~dc~~~~~~gC~GG~~~~a~~~~~~~-g-------------------------------------------------- 215 (281)
+|+||+. .+.||+||.+..|++|++++ |
T Consensus 169 ~LvdC~~-~~~GC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~e~~lk~al~~~GP 247 (331)
T 3qj3_A 169 QLVDCVP-NALGCSGGWMNDAFTYVAQNGGIDSEGAYPYEMADGNCHYDPNQVAARLSGYVYLSGPDENMLADMVATKGP 247 (331)
T ss_dssp HHHHHCT-TSCGGGCCCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCTTSEEECCSEEEEESSCCHHHHHHHHHHHCC
T ss_pred HHhhhcc-CCCCCCCCCHHHHHHHHHHcCCcCcccccCccCCCCCCCCCcccceeEeeEEEEeCCCCHHHHHHHHHhCCC
Confidence 9999998 48899999999999999988 5
Q ss_pred ----------------ceecCc-cC-CCCCceEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcCC-CccccCCce
Q 023507 216 ----------------GIFNGV-CG-TQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE-GLCGIGTRS 276 (281)
Q Consensus 216 ----------------Giy~~~-~~-~~~~Hav~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~Cgi~~~~ 276 (281)
|||..+ |. ..++|||+|||||++ +|++|||||||||++|||+|||||+|+. |.|||++.+
T Consensus 248 V~v~i~a~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~ 326 (331)
T 3qj3_A 248 VAVAFDADDPFGSYSGGVYYNPTCETNKFTHAVLIVGYGNE-NGQDYWLVKNSWGDGWGLDGYFKIARNANNHCGIAGVA 326 (331)
T ss_dssp EEEEECCCTTGGGEEEEEECCTTCCSSCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSC
T ss_pred EEEEEEcccccccccCceEeCCCCCCCcCCEEEEEEEEecc-CCceEEEEEcCCCCCcCCCCEEEEEcCCCCccCcCCce
Confidence 899875 86 579999999999987 8999999999999999999999999996 999999999
Q ss_pred eeeeC
Q 023507 277 SYPLA 281 (281)
Q Consensus 277 ~~~~~ 281 (281)
+||+|
T Consensus 327 ~~p~v 331 (331)
T 3qj3_A 327 SVPTL 331 (331)
T ss_dssp EEEEC
T ss_pred eeeeC
Confidence 99986
No 3
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=100.00 E-value=4.4e-71 Score=506.19 Aligned_cols=238 Identities=37% Similarity=0.760 Sum_probs=207.1
Q ss_pred CChhHHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHhcC---CCCceEEecccCCCCCHHHHHHHHcCCCCC
Q 023507 38 THEQSVVEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKE---GNRTYKLGTNQFSDLTNDEFRALYTGYKMP 114 (281)
Q Consensus 38 ~~~~~~~~~f~~f~~~~~K~Y~s~~E~~~R~~~F~~Nl~~I~~~N~~---~~~s~~~g~N~FsDlt~eE~~~~~~g~~~~ 114 (281)
.++..++.+|++||++|+|+|.+.+|+.+|+.+|++|+++|++||++ ++.+|++|+|+|+|||.|||++ +++.+++
T Consensus 18 ~~~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~-~~g~~~~ 96 (329)
T 3qt4_A 18 LPKSLFQEQWSQFKLTHKKSYSSPIEEIRRQLIFKDNVAKIAEHNAKFEKGEVTYSKAMNQFGDMSKEEFLA-YVNRGKA 96 (329)
T ss_dssp --CCHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEECCCGGGGCCHHHHHH-HHHHTCC
T ss_pred cCHHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCeEEeccccccCCHHHHHH-hcCCccc
Confidence 45688899999999999999999889999999999999999999984 5689999999999999999999 7765532
Q ss_pred CCCCCCC-CCccccccCCCCCCCCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhcC
Q 023507 115 SPSHRST-TSSTFKYQNLSMTDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCST 193 (281)
Q Consensus 115 ~~~~~~~-~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~ 193 (281)
....... ....+.... .+||++||||++ +|+||||||.||||||||+++++|+++++++++.+.||+|+|+||+.
T Consensus 97 ~~~~~~~~~~~~~~~~~---~~lP~~~DwR~~-~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~LvdC~~ 172 (329)
T 3qt4_A 97 QKPKHPENLRMPYVSSK---KPLAASVDWRSN-AVSEVKDQGQCGSSWSFSTTGAVEGQLALQRGRLTSLSEQNLIDCSS 172 (329)
T ss_dssp C------CCEEECCCCC---SCCCSCEECTTT-SCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCG
T ss_pred ccccccccccccccCCc---cCCCCCEEcccc-ccCCCccCCCCcChHHHHHHHHHHHHHHHHcCCcccCCHHHHHHhcc
Confidence 2110000 011111111 279999999999 99999999999999999999999999999999999999999999987
Q ss_pred C-CCCCCCCCcchhhHHHHHhcC---------------------------------------------------------
Q 023507 194 N-GNNGCLGGSREKAFAYIIQNQ--------------------------------------------------------- 215 (281)
Q Consensus 194 ~-~~~gC~GG~~~~a~~~~~~~g--------------------------------------------------------- 215 (281)
. ++.||+||.+..|++|++++|
T Consensus 173 ~~g~~GC~GG~~~~a~~yi~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~v~i~a 252 (329)
T 3qt4_A 173 SYGNAGCDGGWMDSAFSYIHDYGIMSESAYPYEAQGDYCRFDSSQSVTTLSGYYDLPSGDENSLADAVGQAGPVAVAIDA 252 (329)
T ss_dssp GGTCCTTBCCCHHHHHHHHHHSCBCBTTTSCCCSSCCCCCCCGGGCCBCCSEEEECCTTCHHHHHHHHHHTCCEEEEECC
T ss_pred ccCCCCCCCCChhHHHHHHHHcCCCcHHHeeeecCCCCCCCCcccceEEeceEEEecCCCHHHHHHHHHhCCCEEEEEec
Confidence 4 478999999999999999888
Q ss_pred ---------ceecCc-cC-CCCCceEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcCC-CccccCCceeeeeC
Q 023507 216 ---------GIFNGV-CG-TQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE-GLCGIGTRSSYPLA 281 (281)
Q Consensus 216 ---------Giy~~~-~~-~~~~Hav~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~Cgi~~~~~~~~~ 281 (281)
|||..+ |. ..++|||+|||||++ +|++|||||||||++|||+|||||+|+. |.|||++.++||+|
T Consensus 253 ~~~f~~Y~~GVy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~yp~v 329 (329)
T 3qt4_A 253 TDELQFYSGGLFYDQTCNQSDLNHGVLVVGYGSD-NGQDYWILKNSWGSGWGESGYWRQVRNYGNNCGIATAASYPAL 329 (329)
T ss_dssp CGGGTTEEEEEECCSSCCSSCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEESSSSSGGGTTTTCEEEEC
T ss_pred ChhhhhccCceeecCCCCCCcCCEEEEEEEEEee-CCccEEEEEeCCCCcccCCcEEEEEeCCCCccCCCCceeEeeC
Confidence 899885 86 579999999999997 8999999999999999999999999996 99999999999986
No 4
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=100.00 E-value=3.5e-70 Score=499.64 Aligned_cols=237 Identities=46% Similarity=0.945 Sum_probs=210.3
Q ss_pred ChhHHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEecccCCCCCHHHHHHHHcCCCCCCCCC
Q 023507 39 HEQSVVEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKEGNRTYKLGTNQFSDLTNDEFRALYTGYKMPSPSH 118 (281)
Q Consensus 39 ~~~~~~~~f~~f~~~~~K~Y~s~~E~~~R~~~F~~Nl~~I~~~N~~~~~s~~~g~N~FsDlt~eE~~~~~~g~~~~~~~~ 118 (281)
.+.++..+|++|+++|+|+|.+.+|+.+|+.+|++|+++|++||++ +.+|++|+|+|+|||.+||++++++..++....
T Consensus 14 ~e~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~-~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~~~ 92 (322)
T 1pci_A 14 STERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKK-NNSYWLGLNEFADLSNDEFNEKYVGSLIDATIE 92 (322)
T ss_dssp HHHHHHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHHHHHTT-CCSEEECSCTTTTSCHHHHHHHHCCCBCCCSSC
T ss_pred chHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhhcc-CCceEEecCccccCCHHHHHHHhcCCCCccccc
Confidence 4677889999999999999999889999999999999999999985 679999999999999999999888765432210
Q ss_pred CCCCCccccccCCCCCCCCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhcCCCCCC
Q 023507 119 RSTTSSTFKYQNLSMTDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNG 198 (281)
Q Consensus 119 ~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~g 198 (281)
... ...+..... .+||++||||++|+|+||||||.||||||||+++++|+++++++++.+.||+|+|+||+. .+.|
T Consensus 93 ~~~-~~~~~~~~~--~~lP~~~DwR~~g~vt~VkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~lSeq~lvdC~~-~~~g 168 (322)
T 1pci_A 93 QSY-DEEFINEDI--VNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER-RSHG 168 (322)
T ss_dssp CCC-SEECCCCCC--CCSCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHSCT-TSCG
T ss_pred ccc-ccccccccc--cCCCCeEecccCCCCCCccccccCCccHHHHHHHHHHHHHHHHcCCccccCHHHHHhhcC-CCCC
Confidence 000 011111111 379999999999999999999999999999999999999999999999999999999997 6889
Q ss_pred CCCCcchhhHHHHHhcC---------------------------------------------------------------
Q 023507 199 CLGGSREKAFAYIIQNQ--------------------------------------------------------------- 215 (281)
Q Consensus 199 C~GG~~~~a~~~~~~~g--------------------------------------------------------------- 215 (281)
|+||.+..|++|++++|
T Consensus 169 C~GG~~~~a~~yi~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~e~~l~~~l~~GPV~v~i~~~~~~f~ 248 (322)
T 1pci_A 169 CKGGYPPYALEYVAKNGIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQ 248 (322)
T ss_dssp GGCBCHHHHHHHHHHHCBCBTTTSCCCSSCCCCTTTTCCSCCBCCCCEEECCSSBHHHHHHHHHHSCEEEEECTTCHHHH
T ss_pred CCCCCHHHHHHHHHHhCCCchhhCCCCCCCCCCCCCCCCCceEEEeeEEEeCCCcHHHHHHHHHHCCEEEEEeccccccc
Confidence 99999999999999887
Q ss_pred ----ceecCccCCCCCceEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcCC----CccccCCceeeeeC
Q 023507 216 ----GIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE----GLCGIGTRSSYPLA 281 (281)
Q Consensus 216 ----Giy~~~~~~~~~Hav~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~~~~~ 281 (281)
|||+++|....+|||+|||||++ +|++|||||||||++|||+|||||+|+. |.|||++.++||++
T Consensus 249 ~Y~~Gvy~~~c~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~n~CgI~~~~~yp~~ 321 (322)
T 1pci_A 249 LYKGGIFEGPCGTKVDGAVTAVGYGKS-GGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTK 321 (322)
T ss_dssp TEEEEEECCSCCSCCCEEEEEEEEEEE-TTEEEEEEECSBCSSSTBTTEEEEECCCSBSSCGGGGGGCCEEECC
T ss_pred ccCCeEeCCCCCCCCCEEEEEEEEecc-CCccEEEEEeCCCCcccCCeEEEEEcCCCCCCCcCCcccceeEEEe
Confidence 89988898889999999999997 7999999999999999999999999995 99999999999985
No 5
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=100.00 E-value=5.4e-70 Score=496.93 Aligned_cols=236 Identities=39% Similarity=0.787 Sum_probs=206.4
Q ss_pred hHHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHhcC---CCCceEEecccCCCCCHHHHHHHHcCCCCCCCC
Q 023507 41 QSVVEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKE---GNRTYKLGTNQFSDLTNDEFRALYTGYKMPSPS 117 (281)
Q Consensus 41 ~~~~~~f~~f~~~~~K~Y~s~~E~~~R~~~F~~Nl~~I~~~N~~---~~~s~~~g~N~FsDlt~eE~~~~~~g~~~~~~~ 117 (281)
.+++.+|++|+++|+|+|.+.+|+..|+.+|++|+++|++||++ +..+|++|+|+|+|||.+||++.+++..++...
T Consensus 5 ~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~~ 84 (314)
T 1by8_A 5 EILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSH 84 (314)
T ss_dssp CTHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSEEECCCTTSSSCHHHHHHHSCCCCCCSCC
T ss_pred HHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEEcccccccCCHHHHHHHhccCCCCccc
Confidence 46788999999999999999889999999999999999999974 347899999999999999999888776543221
Q ss_pred CCCCCCccccccCCCCCCCCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhcCCCCC
Q 023507 118 HRSTTSSTFKYQNLSMTDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNN 197 (281)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~ 197 (281)
... ...+... .....||++||||++|+|+||||||.||||||||+++++|+++++++++.+.||+|+|+||+. .+.
T Consensus 85 ~~~--~~~~~~~-~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFs~~~alE~~~~i~~g~~~~LSeq~lvdC~~-~~~ 160 (314)
T 1by8_A 85 SRS--NDTLYIP-EWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS-END 160 (314)
T ss_dssp CCS--SSSSBCC-CCSSCCCSCCBSTTTTCSCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHTTCT-TSC
T ss_pred ccC--Ccccccc-ccccCCCCeEeCCCCCCCCCcccCCCCCCcHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcC-CCC
Confidence 111 0111111 111239999999999999999999999999999999999999999999999999999999997 689
Q ss_pred CCCCCcchhhHHHHHh-cC-------------------------------------------------------------
Q 023507 198 GCLGGSREKAFAYIIQ-NQ------------------------------------------------------------- 215 (281)
Q Consensus 198 gC~GG~~~~a~~~~~~-~g------------------------------------------------------------- 215 (281)
||+||.+..|++|+++ .|
T Consensus 161 gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~~~~~ 240 (314)
T 1by8_A 161 GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTS 240 (314)
T ss_dssp GGGCCCSHHHHHHHHHTTCBCBTTTSCCCSSCCCCCCCGGGCCBCCSCEEECCSSCHHHHHHHHHHHCCEEEEECCCSHH
T ss_pred CCcCCCHHHHHHHHHHcCCcCcHhhCCCCCCCCCcCCCCccceeEECcEEEecCCCHHHHHHHHHHcCCEEEEEEeChHH
Confidence 9999999999999984 45
Q ss_pred ------ceecCc-cCC-CCCceEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcC-CCccccCCceeeeeC
Q 023507 216 ------GIFNGV-CGT-QLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRD-EGLCGIGTRSSYPLA 281 (281)
Q Consensus 216 ------Giy~~~-~~~-~~~Hav~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~-~~~Cgi~~~~~~~~~ 281 (281)
|||..+ |.. .++|||+|||||++ +|++|||||||||++|||+|||||+|+ .|.|||++.++||++
T Consensus 241 f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~~p~~ 314 (314)
T 1by8_A 241 FQFYSKGVYYDESCNSDNLNHAVLAVGYGIQ-KGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 314 (314)
T ss_dssp HHTEEEECBCCTTCCSSCCCEEEEEEEEEEE-TTEEEEEEECSBTTTSTBTTEEEECCSSSCGGGTTSSCEEECC
T ss_pred hhhccCceecCCCCCCCCCCeEEEEEEEecc-CCceEEEEEcCCCCCcCcCCEEEEEcCCCCcCCccCeeEEeeC
Confidence 899887 886 79999999999997 899999999999999999999999999 599999999999986
No 6
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=100.00 E-value=1e-69 Score=495.35 Aligned_cols=236 Identities=39% Similarity=0.807 Sum_probs=205.9
Q ss_pred hhHHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHhcC---CCCceEEecccCCCCCHHHHHHHHcCCCCCCC
Q 023507 40 EQSVVEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKE---GNRTYKLGTNQFSDLTNDEFRALYTGYKMPSP 116 (281)
Q Consensus 40 ~~~~~~~f~~f~~~~~K~Y~s~~E~~~R~~~F~~Nl~~I~~~N~~---~~~s~~~g~N~FsDlt~eE~~~~~~g~~~~~~ 116 (281)
+.+++.+|++|+++|+|+|.+.+|+..|+.+|++|+++|++||++ +..+|++|+|+|+|||.+||++.+++..++..
T Consensus 5 ~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~s~~~g~N~FaDlt~eEf~~~~~g~~~~~~ 84 (315)
T 2c0y_A 5 DPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQ 84 (315)
T ss_dssp CGGGHHHHHHHHHHHTCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCGGGGCCHHHHHHHTTSBCCCCG
T ss_pred hHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEeccCccccCCHHHHHHHhcCCCCCcc
Confidence 356788999999999999988889999999999999999999974 35799999999999999999988877654321
Q ss_pred CCCCCCCccccccCCCCCCCCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhc-CC-
Q 023507 117 SHRSTTSSTFKYQNLSMTDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCS-TN- 194 (281)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~-~~- 194 (281)
.. . ...+... . ..+||++||||++|+|+||||||.||||||||+++++|+++++++++.+.||+|+|+||+ ..
T Consensus 85 ~~-~--~~~~~~~-~-~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfs~~~alE~~~~i~~g~~~~LSeq~lvdC~~~~~ 159 (315)
T 2c0y_A 85 WQ-R--NITYKSN-P-NRILPDSVDWREKGCVTEVKYQGSCGAAWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKY 159 (315)
T ss_dssp GG-S--CBCC--------CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGG
T ss_pred cc-C--CccccCc-c-cCCCCCeEecCCCCCcCCCcCcccCCCcHHHHHHHHHHHHHHHHhCCCcCcCHHHHHhhccccc
Confidence 10 0 1111111 1 126999999999999999999999999999999999999999999999999999999998 32
Q ss_pred CCCCCCCCcchhhHHHHHh-cC----------------------------------------------------------
Q 023507 195 GNNGCLGGSREKAFAYIIQ-NQ---------------------------------------------------------- 215 (281)
Q Consensus 195 ~~~gC~GG~~~~a~~~~~~-~g---------------------------------------------------------- 215 (281)
++.||+||.+..|++|+.+ .|
T Consensus 160 ~~~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~~ 239 (315)
T 2c0y_A 160 GNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDAR 239 (315)
T ss_dssp TCCGGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCGGGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCC
T ss_pred CCCCCCCCCHHHHHHHHHHhCCcCchhcCCCccCCCCcccCCcccccccCCeEEeCCCCHHHHHHHHHHcCCEEEEEecC
Confidence 4789999999999999985 56
Q ss_pred ---------ceecCc-cCCCCCceEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcC-CCccccCCceeeeeC
Q 023507 216 ---------GIFNGV-CGTQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRD-EGLCGIGTRSSYPLA 281 (281)
Q Consensus 216 ---------Giy~~~-~~~~~~Hav~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~-~~~Cgi~~~~~~~~~ 281 (281)
|||..+ |.+.++|||+|||||++ +|++|||||||||++|||+|||||+|+ .|.|||++.++||++
T Consensus 240 ~~~f~~Y~~Gvy~~~~c~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~~p~~ 315 (315)
T 2c0y_A 240 HPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDL-NGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI 315 (315)
T ss_dssp SHHHHTEEEEEECCTTCCSCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEEEC
T ss_pred chhhhccCCCcccCCCCCCcCCEEEEEEEEeec-CCCcEEEEEcCCCCCcCCCcEEEEEcCCCCccCcCceeEEeeC
Confidence 899887 98889999999999997 899999999999999999999999999 599999999999986
No 7
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=100.00 E-value=2.8e-69 Score=492.63 Aligned_cols=233 Identities=42% Similarity=0.877 Sum_probs=204.0
Q ss_pred HHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHhcC---CCCceEEecccCCCCCHHHHHHHHcCCCCCCCCC
Q 023507 42 SVVEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKE---GNRTYKLGTNQFSDLTNDEFRALYTGYKMPSPSH 118 (281)
Q Consensus 42 ~~~~~f~~f~~~~~K~Y~s~~E~~~R~~~F~~Nl~~I~~~N~~---~~~s~~~g~N~FsDlt~eE~~~~~~g~~~~~~~~ 118 (281)
.++.+|++|+++|+|+| +.+|+..|+.+|++|+++|++||++ ++.+|++|+|+|+|||.+||++++++..++...
T Consensus 7 ~~~~~f~~~~~~~~k~Y-~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~- 84 (316)
T 1cs8_A 7 SLEAQWTKWKAMHNRLY-GMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPR- 84 (316)
T ss_dssp GGHHHHHHHHHHTTCCC-CTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCCS-
T ss_pred HHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHHhhhccccCCcceEEccCccCCCCHHHHHHHhcCCCCCccc-
Confidence 57889999999999999 7779999999999999999999974 367999999999999999999888876543221
Q ss_pred CCCCCccccccCCCCCCCCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhcCC-CCC
Q 023507 119 RSTTSSTFKYQNLSMTDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTN-GNN 197 (281)
Q Consensus 119 ~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~~~ 197 (281)
. ...+... ...+||++||||++|+|+||||||.||||||||+++++|+++++++++.+.||+|+|+||+.. ++.
T Consensus 85 -~--~~~~~~~--~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~~~g~~ 159 (316)
T 1cs8_A 85 -K--GKVFQEP--LFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNE 159 (316)
T ss_dssp -C--CEECCCC--TTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCC
T ss_pred -c--CccccCc--cccCCCCcEecCCCCCcCCCCcccCCccHHHHHHHHHHHHHHHHHcCCCcCcCHHHHHHhccccCCC
Confidence 0 1111111 112699999999999999999999999999999999999999999999999999999999863 478
Q ss_pred CCCCCcchhhHHHHH-hcC-------------------------------------------------------------
Q 023507 198 GCLGGSREKAFAYII-QNQ------------------------------------------------------------- 215 (281)
Q Consensus 198 gC~GG~~~~a~~~~~-~~g------------------------------------------------------------- 215 (281)
||+||.+..|++|+. ..|
T Consensus 160 gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~ik~~l~~~GPV~v~i~~~~~~f 239 (316)
T 1cs8_A 160 GCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDAGFVDIPKQEKALMKAVATVGPISVAIDAGHESF 239 (316)
T ss_dssp GGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCGGGEEECCCCEEECCSCHHHHHHHHHHHCCEEEEECCCSHHH
T ss_pred CCCCCCHHHHHHHHHHhCCcCchhccCCCCCCCCcCCCCccceeEeccEEEeCCCHHHHHHHHHhcCCEEEEEecCChhh
Confidence 999999999999997 556
Q ss_pred -----ceecCc-cCC-CCCceEEEEEee---ecCCCccEEEEEcCCCCCCCCCcEEEEEcCC-CccccCCceeeeeC
Q 023507 216 -----GIFNGV-CGT-QLDHAVTIVGFG---TTEDGANYWLIKNSWGNTWGDAGYMKIVRDE-GLCGIGTRSSYPLA 281 (281)
Q Consensus 216 -----Giy~~~-~~~-~~~Hav~iVGy~---~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~Cgi~~~~~~~~~ 281 (281)
|||.++ |.. .++|||+||||| ++++|++|||||||||++|||+|||||+|+. |.|||++.++||++
T Consensus 240 ~~Y~~Gvy~~~~c~~~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~~p~~ 316 (316)
T 1cs8_A 240 LFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 316 (316)
T ss_dssp HTEEEEEECCTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEECC
T ss_pred ccccCceECCCCCCCCCCCEEEEEEEecCCcccCCCCcEEEEEcCCCCCcccCCEEEEECCCCCccCccceeeEeeC
Confidence 899886 875 799999999999 5447899999999999999999999999995 99999999999986
No 8
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=100.00 E-value=6.1e-69 Score=489.22 Aligned_cols=230 Identities=39% Similarity=0.799 Sum_probs=199.6
Q ss_pred HHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHhcC---CCCceEEecccCCCCCHHHHHHHHcC-CCCCCCCCCC
Q 023507 45 EIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKE---GNRTYKLGTNQFSDLTNDEFRALYTG-YKMPSPSHRS 120 (281)
Q Consensus 45 ~~f~~f~~~~~K~Y~s~~E~~~R~~~F~~Nl~~I~~~N~~---~~~s~~~g~N~FsDlt~eE~~~~~~g-~~~~~~~~~~ 120 (281)
++|++||++|+|+|.+.+|+.+| .+|++|+++|++||++ ++.+|++|+|+|+|||.+||++++++ ...+......
T Consensus 3 ~~f~~~~~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~~~~~ 81 (310)
T 2o6x_A 3 DLWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILSH 81 (310)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTTSSSEEECCCTTTTSCHHHHHHHHCCCCCCGGGGSCS
T ss_pred HHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHhhhccCCCcEEEeccccCCCCHHHHHHHhcCCCCCccccccc
Confidence 57999999999999888899999 9999999999999975 35799999999999999999988877 4432111000
Q ss_pred CCCccccccCCCCCCCCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhcCC-CCCCC
Q 023507 121 TTSSTFKYQNLSMTDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTN-GNNGC 199 (281)
Q Consensus 121 ~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~~~gC 199 (281)
...+...+. +||++||||++|+|+||||||.||||||||+++++|+++++++++.+.||+|+|+||+.. ++.||
T Consensus 82 --~~~~~~~~~---~lP~~~DwR~~g~vtpVkdQg~CGSCWAfa~~~alE~~~~i~~g~~~~LS~q~lvdC~~~~~~~gC 156 (310)
T 2o6x_A 82 --GVPYEANNR---AVPDKIDWRESGYVTEVKDQGNCGSGWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPWGNNGC 156 (310)
T ss_dssp --SEECCC-------CCSCEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSSCCCBCHHHHHHHCGGGTCCGG
T ss_pred --CCccccccC---CCCCeEecCcCCCCCCcccCCCCCccHHHHhHHHHHHHHHHHhCCCcCcCHHHHHHhhhccCCCCC
Confidence 011111111 699999999999999999999999999999999999999999999999999999999863 47899
Q ss_pred CCCcchhhHHHHHhcC----------------------------------------------------------------
Q 023507 200 LGGSREKAFAYIIQNQ---------------------------------------------------------------- 215 (281)
Q Consensus 200 ~GG~~~~a~~~~~~~g---------------------------------------------------------------- 215 (281)
+||.+..|++|++..|
T Consensus 157 ~GG~~~~a~~yi~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~~GPV~v~i~~~~~f~~Y 236 (310)
T 2o6x_A 157 GGGLMENAYQYLKQFGLETESSYPYTAVEGQCRYNKQLGVAKVTGFYTVHSGSEVELKNLVGAEGPAAVAVDVESDFMMY 236 (310)
T ss_dssp GCCCHHHHHHHHTTSCBCBTTTSCCCSSCCCCCCCGGGCCEEEEEEEEECSCCHHHHHHHHHHHCCEEEEECCCHHHHTE
T ss_pred CCCCHHHHHHHHHHCCcCchhcCCCCCCCCCccCCCCCCceEeCeEEEeCCCCHHHHHHHHHhcCCeEEEEecchhhhhC
Confidence 9999999999998766
Q ss_pred --ceecCc-cCC-CCCceEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcCC-CccccCCceeeeeC
Q 023507 216 --GIFNGV-CGT-QLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE-GLCGIGTRSSYPLA 281 (281)
Q Consensus 216 --Giy~~~-~~~-~~~Hav~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~Cgi~~~~~~~~~ 281 (281)
|||.++ |.. .++|||+|||||++ +|++|||||||||++|||+|||||+|+. |.|||++.++||++
T Consensus 237 ~~Gvy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~Cgi~~~~~~p~~ 306 (310)
T 2o6x_A 237 RSGIYQSQTCSPLRVNHAVLAVGYGTQ-GGTDYWIVKNSWGLSWGERGYIRMVRNRGNMCGIASLASLPMV 306 (310)
T ss_dssp EEEEECCSSCCTTCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSEEEEEE
T ss_pred CCceecCCCCCCCCCCEEEEEEEEecc-CCceEEEEEeCCCCccCCCcEEEEEcCCCCcCCccceeeEEEe
Confidence 999865 874 78999999999997 8999999999999999999999999995 89999999999974
No 9
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=100.00 E-value=7e-64 Score=455.68 Aligned_cols=222 Identities=30% Similarity=0.547 Sum_probs=189.1
Q ss_pred HHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEecccCCCCCHHHHHHHHcCCCCCCCCCCCCCCcc
Q 023507 46 IHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKEGNRTYKLGTNQFSDLTNDEFRALYTGYKMPSPSHRSTTSST 125 (281)
Q Consensus 46 ~f~~f~~~~~K~Y~s~~E~~~R~~~F~~Nl~~I~~~N~~~~~s~~~g~N~FsDlt~eE~~~~~~g~~~~~~~~~~~~~~~ 125 (281)
+|++||++|+|.|.+.+|+..|+.+|++|+++|++ |+ + |+|+|+|||.+||++++++...+...... ...
T Consensus 7 ~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~-N~-~------g~N~F~Dlt~eEf~~~~~~~~~~~~~~~~--~~~ 76 (312)
T 1xkg_A 7 TFEEYKKAFNKSYATFEDEEAARKNFLESVKYVQS-NG-G------AINHLSDLSLDEFKNRFLMSAEAFEHLKT--QFD 76 (312)
T ss_dssp SHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH-HC-C------CCCTTTTSCHHHHHHHHSBCHHHHHHHHH--HHC
T ss_pred HHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHh-cc-C------CCCcccCCCHHHHHHHhcCCCCccccccC--Ccc
Confidence 59999999999999988999999999999999999 75 2 99999999999999877663321100000 000
Q ss_pred ccccC---CCCCCCCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhcCCCCCCCCCC
Q 023507 126 FKYQN---LSMTDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGG 202 (281)
Q Consensus 126 ~~~~~---~~~~~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG 202 (281)
+.... ....+||++||||++|+|+||||||.||||||||+++++|+++++++++.+.||+|+|+||+. ..||+||
T Consensus 77 ~~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~--~~GC~GG 154 (312)
T 1xkg_A 77 LNAETNACSINGNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRDQSLDLAEQELVDCAS--QHGCHGD 154 (312)
T ss_dssp -----CBCCCCSCCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC--SSTTBCC
T ss_pred cccccccccccccCCCccccccCCCcCCccccCCCCccHHHHHHHHHHHHHHHHhCCCCCcCHHHHHhccC--CCCCCCC
Confidence 11000 001279999999999999999999999999999999999999999999999999999999983 2799999
Q ss_pred cchhhHHHHHhcC-------------------------------------------------------------------
Q 023507 203 SREKAFAYIIQNQ------------------------------------------------------------------- 215 (281)
Q Consensus 203 ~~~~a~~~~~~~g------------------------------------------------------------------- 215 (281)
.+..|++|+++.|
T Consensus 155 ~~~~a~~yi~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~i~~y~~v~~~~~~~ik~al~~~~GPV~v~i~~~~~~~f~~Y~ 234 (312)
T 1xkg_A 155 TIPRGIEYIQHNGVVQESYYRYVAREQSCRRPNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYD 234 (312)
T ss_dssp CHHHHHHHHHHHCEEBGGGSCCCSSCCCCCCCSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCC
T ss_pred CHHHHHHHHHHcCCCccccCCccCCCCCCCCCCCceEEEeeEEEeCCCCHHHHHHHHHhcCCCEEEEEEecccccccccC
Confidence 9999999998776
Q ss_pred -ceecCc-cC-C-CCCceEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcCCCccccCCceeeeeC
Q 023507 216 -GIFNGV-CG-T-QLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEGLCGIGTRSSYPLA 281 (281)
Q Consensus 216 -Giy~~~-~~-~-~~~Hav~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~~~~~ 281 (281)
|||..+ |. . . +|||+|||||++ +|++|||||||||++|||+|||||+|+.|.|||++.++||++
T Consensus 235 ~GVy~~~~c~~~~~-~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~n~CgI~~~~~~~~~ 302 (312)
T 1xkg_A 235 GRTIIQRDNGYQPN-YHAVNIVGYSNA-QGVDYWIVRNSWDTNWGDNGYGYFAANIDLMMIEEYPYVVIL 302 (312)
T ss_dssp SSSCBCCCCSSCCE-EEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTCCEEEEC
T ss_pred CcEEcCCCCCCCcC-ceEEEEEEEecc-CCceEEEEEeCCCCcccCCcEEEEEcCCCcccccceeEEeec
Confidence 677764 76 4 5 999999999997 899999999999999999999999999999999999999985
No 10
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=100.00 E-value=2.5e-59 Score=442.44 Aligned_cols=214 Identities=28% Similarity=0.558 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCceEEe-cccCCCCCHHHHHHHHcCCCCCCCCCCCCCCccccccCCCCCCCCCce
Q 023507 62 LEKEMRLKIFKENLEYIEKANKEGNRTYKLG-TNQFSDLTNDEFRALYTGYKMPSPSHRSTTSSTFKYQNLSMTDVPTSL 140 (281)
Q Consensus 62 ~E~~~R~~~F~~Nl~~I~~~N~~~~~s~~~g-~N~FsDlt~eE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~ 140 (281)
.|+..|+++|++|+++|++||++ +.+|+++ +|+|+|||.+||++++++.+++.+...+......... ...+||++|
T Consensus 135 ~~~~~R~~if~~N~~~I~~~N~~-~~~~~~~~~n~faDlT~eEf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~lP~s~ 211 (441)
T 3pdf_A 135 SQEKYSNRLYKYDHNFVKAINAI-QKSWTATTYMEYETLTLGDMIRRSGGHSRKIPRPKPAPLTAEIQQ--KILFLPTSW 211 (441)
T ss_dssp --------------------------------------------------------------------------CCCSCE
T ss_pred hhHHHHHHHHHHHHHHHHHHHcc-CCceEeecccccccCCHHHHHHHhCCCcccccccccCcccccccc--ccccCCCCE
Confidence 46689999999999999999985 5799998 8999999999999988765432211111000000011 123799999
Q ss_pred eccCCC---CcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCC--CCCHHHHhhhcCCCCCCCCCCcchhh-HHHHHhc
Q 023507 141 DWRDKG---AVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLI--QLSEQQLLDCSTNGNNGCLGGSREKA-FAYIIQN 214 (281)
Q Consensus 141 Dwr~~g---~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~--~lS~q~l~dc~~~~~~gC~GG~~~~a-~~~~~~~ 214 (281)
|||+++ +|+||||||.||||||||+++++|+++++++++.+ .||+|+|+||+. .+.||+||.+..+ ++|+++.
T Consensus 212 DwR~~~g~~~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~~~LSeQ~LvdC~~-~~~GC~GG~~~~aa~~yi~~~ 290 (441)
T 3pdf_A 212 DWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQ-YAQGCEGGFPYLIAGKYAQDF 290 (441)
T ss_dssp ETTCBTTBCCSCCCCBCTTSBCHHHHHHHHHHHHHHHHHHTTSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHTTHHHHHT
T ss_pred ECCcCCCCCccCcccccCCCchHHHHHHHHHHHHHHHHhccCCCccccCHHHHHhhcc-CCCCCCCCchhHHHHHHHHhc
Confidence 999964 89999999999999999999999999999998764 599999999998 6899999999987 8999988
Q ss_pred C----------------------------------------------------------------------ceecCc-cC
Q 023507 215 Q----------------------------------------------------------------------GIFNGV-CG 223 (281)
Q Consensus 215 g----------------------------------------------------------------------Giy~~~-~~ 223 (281)
| |||.++ |.
T Consensus 291 Gi~tE~~yPY~~~~~~C~~~~~~~~~~~~~y~~v~~~~~~~~e~~ik~al~~~GPVsvai~a~~~F~~Y~sGVy~~~~~~ 370 (441)
T 3pdf_A 291 GLVEEACFPYTGTDSPCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHHTGLR 370 (441)
T ss_dssp CBCBGGGSCCCSSCCCSCCCSSCCCBCEEEEEETTSSTTCCCHHHHHHHHHHHCCEEEEECCCGGGGGCCSSEECCC---
T ss_pred CCCcHHHeeecccCCCCCCccccceeeeccEEEeCCccCCCcHHHHHHHHHHCCCeEEEEEecccccccCCceEecCCCC
Confidence 8 899876 32
Q ss_pred ------CCCCceEEEEEeeec-CCCccEEEEEcCCCCCCCCCcEEEEEcCCCccccCCceeee
Q 023507 224 ------TQLDHAVTIVGFGTT-EDGANYWLIKNSWGNTWGDAGYMKIVRDEGLCGIGTRSSYP 279 (281)
Q Consensus 224 ------~~~~Hav~iVGy~~~-~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~~~ 279 (281)
..++|||+|||||++ ++|++|||||||||++|||+|||||+|+.|.|||++.++++
T Consensus 371 ~~~~~~~~~~HaV~iVGyG~~~~~G~~YWIVkNSWG~~WGe~GYfri~rg~n~CGI~s~~~a~ 433 (441)
T 3pdf_A 371 DPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGTDECAIESIAVAA 433 (441)
T ss_dssp CCCCCCCCCCEEEEEEEEEECTTTCCEEEEEECSBCTTSTBTTEEEEECSSCGGGTTSCCEEE
T ss_pred cccCCCCcCCeEEEEEEecccCCCCceEEEEEcCCCCCcCCCeEEEEEcCCCccCCCCceEEe
Confidence 248999999999986 47999999999999999999999999999999999998865
No 11
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=100.00 E-value=2.2e-57 Score=415.34 Aligned_cols=213 Identities=28% Similarity=0.541 Sum_probs=132.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCceEEecc-cCCCCCHHHHHHHHcCCCCCCCCCCCCCCccccccCCCCCCCCCceecc
Q 023507 65 EMRLKIFKENLEYIEKANKEGNRTYKLGTN-QFSDLTNDEFRALYTGYKMPSPSHRSTTSSTFKYQNLSMTDVPTSLDWR 143 (281)
Q Consensus 65 ~~R~~~F~~Nl~~I~~~N~~~~~s~~~g~N-~FsDlt~eE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr 143 (281)
+.|+..+..+.++|++||++++.+|++++| +|+|||.|||++++ +..+............+...+. ..+||++||||
T Consensus 2 ~~~~~a~~~~~~~i~~~N~~~~~~~~~~~n~~f~dlt~eE~~~~~-g~~~~~~~~~~~~~~~~~~~~~-~~~lP~s~DwR 79 (325)
T 3hhi_A 2 LVAEDAPVLSKAFVDRVNRLNRGIWKAKYDGVMQNITLREAKRLN-GVIKKNNNASILPKRRFTEEEA-RAPLPSSFDSA 79 (325)
T ss_dssp -------------------------------------------------------CCSCBCCCCHHHH-HCCCCSCEEHH
T ss_pred CcccccccccHHHHHHHHhCCCCceEEecccccccCCHHHHHHHh-CCCCCCcccccccCcccccccc-ccCCCCcEehh
Confidence 457778888999999999866689999999 89999999999865 4332211100000111111111 13799999999
Q ss_pred CC----CCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCC-CCCCCHHHHhhhcCCCCCCCCCCcchhhHHHHHhcC---
Q 023507 144 DK----GAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGN-LIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQ--- 215 (281)
Q Consensus 144 ~~----g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~-~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~g--- 215 (281)
++ |.|+||||||.||||||||+++++|+++++++++ .+.||+|+|+||+...+.||+||.+..|++|++++|
T Consensus 80 ~~w~~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~~~~~~~LSeQ~LvdC~~~~~~GC~GG~~~~A~~yi~~~Gi~~ 159 (325)
T 3hhi_A 80 EAWPNCPTIPQIADQSACGSCWAVAAASAMSDRFCTMGGVQDVHISAGDLLACCSDCGDGCNGGDPDRAWAYFSSTGLVS 159 (325)
T ss_dssp HHSTTCTTTTCCCBCCSSBCHHHHHHHHHHHHHHHHTSSCSSCCBCHHHHHHHCGGGBCTTBCBCHHHHHHHHHHTCBCB
T ss_pred HhcCCCCccccccCCCCccccHHHHHHHHHHHHHHHHhCCCccccCHHHHHHhccCCCCCCCCCCHHHHHHHHHHhCCCc
Confidence 88 8999999999999999999999999999999987 899999999999874468999999999999985322
Q ss_pred --------------------------------------------------------------------------------
Q 023507 216 -------------------------------------------------------------------------------- 215 (281)
Q Consensus 216 -------------------------------------------------------------------------------- 215 (281)
T Consensus 160 e~~yPY~~~~c~~~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~y~v~~~~~i~~~i~~~GPV~v~i~~~~ 239 (325)
T 3hhi_A 160 DYCQPYPFPHCSHHSKSKNGYPPCSQFNFDTPKCDYTCDDPTIPVVNYRSWTSYALQGEDDYMRELFFRGPFEVAFDVYE 239 (325)
T ss_dssp TTTSCCSSCCCBSSSCCTTCCCBGGGCCCCCCCCCSSCSSTTSCCCCBCEEEEEEECSHHHHHHHHHHHCCEEEEEEEEH
T ss_pred ccccCCccccccccccccccCCCCCCcccCCcchhhcccccccccceEEeecceEeCCHHHHHHHHHHCCCEEEEEEecc
Confidence
Q ss_pred -------ceecCccCC-CCCceEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcCCCccccCCceeeee
Q 023507 216 -------GIFNGVCGT-QLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEGLCGIGTRSSYPL 280 (281)
Q Consensus 216 -------Giy~~~~~~-~~~Hav~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~~~~ 280 (281)
|||.++|.. .++|||+|||||++ +|++|||||||||+.|||+|||||+|+.|.|||++++++++
T Consensus 240 ~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~~-~g~~YWivkNSWG~~WGe~GY~~i~rg~n~CGI~~~~~~g~ 311 (325)
T 3hhi_A 240 DFIAYNSGVYHHVSGQYLGGHAVRLVGWGTS-NGVPYWKIANSWNTEWGMDGYFLIRRGSSECGIEDGGSAGI 311 (325)
T ss_dssp HHHTCCSSEECCCSCCEEEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTSCEEEEE
T ss_pred ccccccCceecCCCCCCCCCEEEEEEEEEec-CCceEEEEEeCCCCCcccCCEEEEEcCCCeecCccceEEee
Confidence 666665433 35899999999986 89999999999999999999999999999999999998764
No 12
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=100.00 E-value=3.5e-55 Score=399.71 Aligned_cols=197 Identities=30% Similarity=0.669 Sum_probs=162.8
Q ss_pred HHHHHHHHhcCCCCceEEecccCCCCCHHHHHHHHcCCCCCCCCCCCCCCccccccCCCCCCCCCceeccCC----CCcC
Q 023507 74 NLEYIEKANKEGNRTYKLGTNQFSDLTNDEFRALYTGYKMPSPSHRSTTSSTFKYQNLSMTDVPTSLDWRDK----GAVT 149 (281)
Q Consensus 74 Nl~~I~~~N~~~~~s~~~g~N~FsDlt~eE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~----g~v~ 149 (281)
+.++|++||+ .+.+|++|+| |+|++.||+++ ++|..++.... ......... .+||++||||++ +.|+
T Consensus 11 ~~~~i~~~N~-~~~~~~~~~n-f~~~~~e~~~~-~lg~~~~~~~~----~~~~~~~~~--~~lP~s~DwR~~~~~c~~vt 81 (317)
T 3pbh_A 11 SDELVNYVNK-RNTTWQAGHN-FYNVDMSYLKR-LCGTFLGGPKP----PQRVMFTED--LKLPASFDAREQWPQCPTIK 81 (317)
T ss_dssp CHHHHHHHHH-HTCSEEECCC-CSSCCHHHHHH-TCCBCTTCCCC----SEEECCCSC--CCCCSSEEHHHHCTTCGGGT
T ss_pred cHHHHHHHHC-CCCCeEEeec-cccCCHHHHHH-HcCCCCCcccc----Ccccccccc--cCCCCCEechhccCCCCCcC
Confidence 4678999997 4689999999 99999877765 45655432211 111111111 379999999987 6899
Q ss_pred cccCCCCcchhHHHHHHHHHHHHHHHHcCC--CCCCCHHHHhhhcC-CCCCCCCCCcchhhHHHHHhcC-----------
Q 023507 150 PIKNQKECGCCWAFAAVAAVEGITKIRSGN--LIQLSEQQLLDCST-NGNNGCLGGSREKAFAYIIQNQ----------- 215 (281)
Q Consensus 150 pv~dQg~cgsCwAfa~~~~le~~~~~~~~~--~~~lS~q~l~dc~~-~~~~gC~GG~~~~a~~~~~~~g----------- 215 (281)
||||||.||||||||+++++|++++++++. .+.||+|+|+||+. ..+.||+||.+..|++|++++|
T Consensus 82 pVkdQg~CGSCWAFsa~~ale~~~~i~~~~~~~~~LSeq~LvdC~~~~~~~GC~GG~~~~A~~yi~~~Gi~te~~Y~~~~ 161 (317)
T 3pbh_A 82 EIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSGGLYESHV 161 (317)
T ss_dssp CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHSCTTTBCGGGCBCHHHHHHHHHHTCEEBBCSTTCCC
T ss_pred CccccCCccchHHHHHHHHHHHHHHHHhCCCCcccCCHHHHHHhccccCCCCCCCCCHHHHHHHHHHhCCCcchhccCCC
Confidence 999999999999999999999999999874 78999999999987 3578999999999999986532
Q ss_pred --------------------------------------------------------------------------------
Q 023507 216 -------------------------------------------------------------------------------- 215 (281)
Q Consensus 216 -------------------------------------------------------------------------------- 215 (281)
T Consensus 162 ~c~PY~~~~c~~~~~~~~~~C~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~v~~~e~~i~~~i~~~GPV~v~i~~~~ 241 (317)
T 3pbh_A 162 GCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSVYS 241 (317)
T ss_dssp BSSCCCSCCCCCCCTTCCSCCCSCCCCCCCCCSCCSSCCSCGGGSEECBCCCEEECSCHHHHHHHHHHHCCEEEEEEEEG
T ss_pred CCcCcccCcccccccCcCCCCCCcCCCCcccccccCCCccceeeeeeeeeecccCCcHHHHHHHHHHHCCCEEEEEEecc
Confidence
Q ss_pred -------ceecCccCC-CCCceEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcCCCccccCCceeeee
Q 023507 216 -------GIFNGVCGT-QLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEGLCGIGTRSSYPL 280 (281)
Q Consensus 216 -------Giy~~~~~~-~~~Hav~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~~~~ 280 (281)
|||.++|.. .++|||+|||||++ +|++|||||||||++|||+|||||+|+.|.|||++.++.++
T Consensus 242 ~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~~-~g~~YWivkNSWG~~WGe~GY~ri~rg~n~CgI~~~~~a~~ 313 (317)
T 3pbh_A 242 DFLLYKSGVYQHVTGEMMGGHAIRILGWGVE-NGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGI 313 (317)
T ss_dssp GGGGEEEEEECCCSCCEEEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEECC
T ss_pred cccCCCCcEEccCCCCCCCCEEEEEEEEEEe-CCeeEEEEEcCCCCCcCCCcEEEEEcCCCcccCCCceEeee
Confidence 677666554 35899999999987 89999999999999999999999999999999999988653
No 13
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=100.00 E-value=1.2e-51 Score=358.55 Aligned_cols=145 Identities=56% Similarity=1.153 Sum_probs=137.4
Q ss_pred CCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhcCC-CCCCCCCCcchhhHHHHHhc
Q 023507 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTN-GNNGCLGGSREKAFAYIIQN 214 (281)
Q Consensus 136 lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~~~gC~GG~~~~a~~~~~~~ 214 (281)
||++||||++|.|+|||||+.||||||||+++++|+++++++++.++||+|+|+||+.. .+.||+||.+..|++|++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~i~~~~~~~LS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 80 (220)
T 3p5u_A 1 LPDYVDWRSSGAVVDIKDQGQCGSAWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQNTRGCDGGFMTDGFQFIINN 80 (220)
T ss_dssp CCSCEETTTTTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCCSSCCTTBCCCHHHHHHHHHHH
T ss_pred CCCCCcCCcCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHhHcEECCCCCCCCCCCCCCHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999984 27899999999999999887
Q ss_pred -C-------------------------------------------------------------------ceecCccCCCC
Q 023507 215 -Q-------------------------------------------------------------------GIFNGVCGTQL 226 (281)
Q Consensus 215 -g-------------------------------------------------------------------Giy~~~~~~~~ 226 (281)
| |||+++|....
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~l~~~l~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~~~~ 160 (220)
T 3p5u_A 81 GGINTEANYPYTAEEGQCNLDLQQEKYVSIDTYENVPYNNEWALQTAVAYQPVSVALEAAGYNFQHYSSGIFTGPCGTAV 160 (220)
T ss_dssp TCBCBTTTSCCCSSCCCCCHHHHTCCSBCCCEEEECCTTCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCCCCCSC
T ss_pred CCcCcccccccccCCCCcCcCCCCCceEEEccEEEeCCCcHHHHHHHHhcCCEEEEEecCchhhccccCceECCCCCCcc
Confidence 5 89988898889
Q ss_pred CceEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcCCC---ccccCCceeeeeC
Q 023507 227 DHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEG---LCGIGTRSSYPLA 281 (281)
Q Consensus 227 ~Hav~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~---~Cgi~~~~~~~~~ 281 (281)
+|||+|||||++ +|++|||||||||+.|||+|||||+|+.| .|||++.++||++
T Consensus 161 ~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~Cgi~~~~~~p~~ 217 (220)
T 3p5u_A 161 DHAVTIVGYGTE-GGIDYWIVKNSWGTTWGEEGYMRIQRNVGGVGQCGIAKKASYPVK 217 (220)
T ss_dssp CEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECCCCTTCGGGTTSSCEEEEC
T ss_pred ceEEEEEEEecC-CCceEEEEECCCCCCcccCCEEEEECCCCCCCccCcccccceEEE
Confidence 999999999986 89999999999999999999999999965 9999999999985
No 14
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=100.00 E-value=1.2e-51 Score=357.41 Aligned_cols=144 Identities=47% Similarity=1.005 Sum_probs=136.4
Q ss_pred CCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhcCCCCCCCCCCcchhhHHHHHhc-
Q 023507 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQN- 214 (281)
Q Consensus 136 lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~- 214 (281)
||++||||++|+|+||||||.||||||||+++++|+++++++++.+.||+|+|+||+. .+.||+||.+..|++|++++
T Consensus 1 lP~~~Dwr~~~~v~pvkdQg~cGsCWAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~-~~~gC~GG~~~~a~~~~~~~~ 79 (215)
T 3kwz_A 1 APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS-ENDGCGGGYMTNAFQYVQKNR 79 (215)
T ss_dssp CTTCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHHT
T ss_pred CCCCCccCcCCCCCCcccCCCCcHHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcC-CCCCCCCCCHHHHHHHHHHhC
Confidence 6999999999999999999999999999999999999999999999999999999998 68999999999999999887
Q ss_pred C-------------------------------------------------------------------ceecCc-cC-CC
Q 023507 215 Q-------------------------------------------------------------------GIFNGV-CG-TQ 225 (281)
Q Consensus 215 g-------------------------------------------------------------------Giy~~~-~~-~~ 225 (281)
| |||..+ |. ..
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~ 159 (215)
T 3kwz_A 80 GIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDN 159 (215)
T ss_dssp CEEBTTTSCCCSSCCCCCCCGGGEEECCCCEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCTTC
T ss_pred CccccccCCCccCCCccccCCCCceeEecceEEeCCCCHHHHHHHHHHCCCEEEEEeechhhhhcccCCeECCCCCCCCh
Confidence 6 899775 74 47
Q ss_pred CCceEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcCC-CccccCCceeeeeC
Q 023507 226 LDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE-GLCGIGTRSSYPLA 281 (281)
Q Consensus 226 ~~Hav~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~Cgi~~~~~~~~~ 281 (281)
++|||+|||||++ ++++|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 160 ~~HaV~iVGyg~~-~g~~yWivkNSWG~~WG~~Gy~~i~r~~~n~Cgi~~~~~~p~~ 215 (215)
T 3kwz_A 160 LNHAVLAVGYGIQ-KGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 215 (215)
T ss_dssp CCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEESSSSSGGGTTSSCEEECC
T ss_pred hhCEEEEEEEecc-CCceEEEEECCcCcccccCCEEEEecCCCCccCcCCceeeeeC
Confidence 9999999999987 8899999999999999999999999995 99999999999986
No 15
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=100.00 E-value=1.4e-51 Score=357.05 Aligned_cols=144 Identities=39% Similarity=0.864 Sum_probs=134.6
Q ss_pred CCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhcCCCCCCCCCCcchhhHHHHHhc-
Q 023507 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQN- 214 (281)
Q Consensus 136 lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~- 214 (281)
||++||||++|+|+||||||.||||||||+++++|+++++++++.+.||+|+|+||+. .+.||+||.+..|++|++++
T Consensus 1 lP~~~Dwr~~g~vtpVkdQg~cGsCWAfa~~~ale~~~~i~~~~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~y~~~~~ 79 (215)
T 3i06_A 1 APAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDK-TDSGCSGGLMNNAFEWIVQEN 79 (215)
T ss_dssp CCSEEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHCS-SSCGGGCCCHHHHHHHHHHHS
T ss_pred CCCcccCCcCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCccCHHHHhccCC-CCCCCCCCCHHHHHHHHHHhc
Confidence 6999999999999999999999999999999999999999999999999999999998 58899999999999999875
Q ss_pred --C-------------------------------------------------------------------ceecCccCCC
Q 023507 215 --Q-------------------------------------------------------------------GIFNGVCGTQ 225 (281)
Q Consensus 215 --g-------------------------------------------------------------------Giy~~~~~~~ 225 (281)
| |||+..+...
T Consensus 80 ~gGi~~e~~yPY~~~~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~ik~~l~~~gPV~v~~~~~~f~~Y~~Giy~~~~~~~ 159 (215)
T 3i06_A 80 NGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTSCVSEQ 159 (215)
T ss_dssp TTEEEC-CCSCCCCTTSCCCCCCCSSCCEEEEEEEEEECCSCHHHHHHHHHHHCCEEEEECCTTGGGCCSSEECSCCCSC
T ss_pred cccccccCccCCcCCCCCCCccccCCcccceEecceEEeCChHHHHHHHHHHCCCEEEEEEchHHhcCCCCcccCCCCCc
Confidence 3 8887533456
Q ss_pred CCceEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcCCCccccCCceeeeeC
Q 023507 226 LDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEGLCGIGTRSSYPLA 281 (281)
Q Consensus 226 ~~Hav~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~~~~~ 281 (281)
.+|||+|||||++ ++++|||||||||++|||+|||||+|+.|.|||++++++|++
T Consensus 160 ~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~rg~n~cgi~~~~~~~~~ 214 (215)
T 3i06_A 160 LDHGVLLVGYNDS-AAVPYWIIKNSWTTQWGEEGYIRIAKGSNQCLVKEEASSAVV 214 (215)
T ss_dssp CCEEEEEEEEESS-SSSCEEEEECSBCTTSTBTTEEEEESSSCGGGTTSSEEEEEE
T ss_pred cCcEEEEEEEecc-CCcEEEEEECCCCCCcccCceEEEecCCCeecCCCceeEEec
Confidence 8999999999986 889999999999999999999999999999999999999985
No 16
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=100.00 E-value=2.8e-51 Score=355.34 Aligned_cols=144 Identities=55% Similarity=1.133 Sum_probs=137.3
Q ss_pred CCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhcCCCCCCCCCCcchhhHHHHHhcC
Q 023507 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQ 215 (281)
Q Consensus 136 lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~g 215 (281)
||++||||++|.|+||||||.||||||||+++++|+++++++++.+.||+|+|+||+. .+.||+||.+..|++|++++|
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~yi~~~G 79 (216)
T 1ppo_A 1 LPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER-RSHGCKGGYPPYALEYVAKNG 79 (216)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS-SSCTTBCCCHHHHHHHHHHHC
T ss_pred CCCcCcCCCCCCCCCCccCCcCccHHHHHHHHHHHHHHHHccCCceecCHHHHHhccC-CCCCCCCCCHHHHHHHHHHhC
Confidence 6999999999999999999999999999999999999999999999999999999997 578999999999999999887
Q ss_pred -------------------------------------------------------------------ceecCccCCCCCc
Q 023507 216 -------------------------------------------------------------------GIFNGVCGTQLDH 228 (281)
Q Consensus 216 -------------------------------------------------------------------Giy~~~~~~~~~H 228 (281)
|||+++|.+..+|
T Consensus 80 i~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~~~~~H 159 (216)
T 1ppo_A 80 IHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKVDH 159 (216)
T ss_dssp BCBTTTSCCCSSCCCCCGGGCCSCCBCCCEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHHCCSSEECCSCCSCCCE
T ss_pred cCccccCCccCCCCCcCCCCCCCceEEeccEEEECCCCHHHHHHHHHhCCEEEEEecCChhhhhcCCceECCCCCCCCCE
Confidence 8998889888899
Q ss_pred eEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcCC----CccccCCceeeeeC
Q 023507 229 AVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE----GLCGIGTRSSYPLA 281 (281)
Q Consensus 229 av~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~~~~~ 281 (281)
||+|||||++ +|++|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 160 aV~iVGyg~~-~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~n~Cgi~~~~~~p~~ 215 (216)
T 1ppo_A 160 AVTAVGYGKS-GGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTK 215 (216)
T ss_dssp EEEEEEEEEE-TTEEEEEEECSBCSSSTBTTEEEEECCCSSSSCGGGTTSCCEEEEC
T ss_pred EEEEEEeecc-CCccEEEEEeCCCCCcccCcEEEEEcCCCCCCCcCccccceeeEee
Confidence 9999999997 7899999999999999999999999984 89999999999985
No 17
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=100.00 E-value=2.6e-51 Score=355.25 Aligned_cols=144 Identities=59% Similarity=1.178 Sum_probs=137.2
Q ss_pred CCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhcCCCCCCCCCCcchhhHHHHHhc-
Q 023507 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQN- 214 (281)
Q Consensus 136 lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~- 214 (281)
||++||||++|+|+||||||.||||||||+++++|+++++++++.+.||+|+|+||+. .+.||+||.+..|++|++++
T Consensus 1 lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~~e~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~~~~~~ 79 (215)
T 1iwd_A 1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDT-ASHGCNGGWMNNAFQYIITNG 79 (215)
T ss_dssp CCSCEEGGGGTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHHT
T ss_pred CCCcEeCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHhcCCccccChhHeEECcC-CCCCCCCCCHHHHHHHHHHhC
Confidence 6999999999999999999999999999999999999999999999999999999997 47899999999999999887
Q ss_pred C-----------------------------------------------------------------ceecCccCCCCCce
Q 023507 215 Q-----------------------------------------------------------------GIFNGVCGTQLDHA 229 (281)
Q Consensus 215 g-----------------------------------------------------------------Giy~~~~~~~~~Ha 229 (281)
| |||+++|....+||
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~~~~Ha 159 (215)
T 1iwd_A 80 GIDTQQNYPYSAVQGSCKPYRLRVVSINGFQRVTRNNESALQSAVASQPVSVTVEAAGAPFQHYSSGIFTGPCGTAQNHG 159 (215)
T ss_dssp CBCBTTTSCCCSSCCCCCTTCCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCCCCCEE
T ss_pred CcccccccCccCCCCCCCCCCCceEEeCcEEEeCCCcHHHHHHHHHhCCEEEEEecCCcchhhcCCceECCCCCCcCCEE
Confidence 5 89988888889999
Q ss_pred EEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcCC----CccccCCceeeeeC
Q 023507 230 VTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE----GLCGIGTRSSYPLA 281 (281)
Q Consensus 230 v~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~~~~~ 281 (281)
|+|||||++ +|++|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 160 V~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 214 (215)
T 1iwd_A 160 VVIVGYGTQ-SGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPSYPTK 214 (215)
T ss_dssp EEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred EEEEEEecc-CCccEEEEEeCCCCCcCCCcEEEEEcCCCCCCCCCCccccceeeee
Confidence 999999997 8999999999999999999999999985 89999999999985
No 18
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=100.00 E-value=1.8e-51 Score=356.94 Aligned_cols=145 Identities=47% Similarity=1.042 Sum_probs=136.4
Q ss_pred CCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhc-CC-CCCCCCCCcchhhHHHHHh
Q 023507 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCS-TN-GNNGCLGGSREKAFAYIIQ 213 (281)
Q Consensus 136 lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~-~~-~~~gC~GG~~~~a~~~~~~ 213 (281)
||++||||++|+|+|||||+.||||||||+++++|+++++++++.++||+|+|+||+ .. .+.||+||.+..|++|+.+
T Consensus 2 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~~gC~GG~~~~a~~~~~~ 81 (218)
T 3ovx_A 2 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIID 81 (218)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCCCcccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHcCCccccCHHHheeccCCcCCCCCCCCCCHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999999998 32 4789999999999999976
Q ss_pred -cC-------------------------------------------------------------------ceecCc-cCC
Q 023507 214 -NQ-------------------------------------------------------------------GIFNGV-CGT 224 (281)
Q Consensus 214 -~g-------------------------------------------------------------------Giy~~~-~~~ 224 (281)
.| |||..+ |..
T Consensus 82 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~ 161 (218)
T 3ovx_A 82 NKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQ 161 (218)
T ss_dssp HTCEEBTTTSCCCSSCCCCCCCGGGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHHCCSSEECCTTCCS
T ss_pred hCCcCcccccCccCCCCcccCCCccceeeeccEEEeCCCCHHHHHHHHHhcCCEEEEEEecchhhhcccCceecCCCCCc
Confidence 46 899876 877
Q ss_pred CCCceEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcCC-CccccCCceeeeeC
Q 023507 225 QLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE-GLCGIGTRSSYPLA 281 (281)
Q Consensus 225 ~~~Hav~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~Cgi~~~~~~~~~ 281 (281)
.++|||+|||||++ +|++|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 162 ~~~HaV~iVGyg~~-~g~~ywivkNSWG~~WG~~Gy~~i~~~~~n~cgi~~~~~~p~~ 218 (218)
T 3ovx_A 162 NVNHGVLVVGYGDL-NGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI 218 (218)
T ss_dssp CCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEEEC
T ss_pred ccCcEEEEEEEecc-CCceEEEEECCCCCccccCCEEEEecCCCCcccccCceeeeeC
Confidence 89999999999997 7899999999999999999999999996 99999999999986
No 19
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=100.00 E-value=3.4e-51 Score=355.95 Aligned_cols=145 Identities=54% Similarity=1.163 Sum_probs=137.1
Q ss_pred CCCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhcCCCCCCCCCCcchhhHHHHHhc
Q 023507 135 DVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQN 214 (281)
Q Consensus 135 ~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~ 214 (281)
+||++||||++|.|+|||||+.||||||||+++++|+++++++++.+.||+|+|+||+. .+.||+||.+..|++|++++
T Consensus 2 ~lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~y~~~~ 80 (221)
T 1cqd_A 2 DLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTT-ANHGCRGGWMNPAFQFIVNN 80 (221)
T ss_dssp -CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHH
T ss_pred CCCCcCcCCCCCCcCCcccCCCCccHHHHHHHHHHHHHHHHhcCCeeeeccceeEECCC-CCCCCCCCCHHHHHHHHHHh
Confidence 68999999999999999999999999999999999999999999999999999999997 47899999999999999887
Q ss_pred -C------------------------------------------------------------------ceecCccCCCCC
Q 023507 215 -Q------------------------------------------------------------------GIFNGVCGTQLD 227 (281)
Q Consensus 215 -g------------------------------------------------------------------Giy~~~~~~~~~ 227 (281)
| |||+++|...++
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~~~~~~~ 160 (221)
T 1cqd_A 81 GGINSEETYPYRGQDGICNSTVNAPVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTGSCNISAN 160 (221)
T ss_dssp TSBCBTTTSCCCSSCCCCCSSSCCCSBCCSEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCCCCCCCC
T ss_pred CCccccccCCccCCCCCcCCCCCCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEeccCcccccccCccccCCCCCcCC
Confidence 5 899888888899
Q ss_pred ceEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcC----CCccccCCceeeeeC
Q 023507 228 HAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRD----EGLCGIGTRSSYPLA 281 (281)
Q Consensus 228 Hav~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~----~~~Cgi~~~~~~~~~ 281 (281)
|||+|||||++ +|++|||||||||++|||+|||||+|+ .|.|||+++++||++
T Consensus 161 HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 217 (221)
T 1cqd_A 161 HALTVVGYGTE-NDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASYPVK 217 (221)
T ss_dssp EEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred eEEEEEEEccc-CCCcEEEEEeCCCCCcccCCEEEEEcCCCCCCcccceeeeeeEEEe
Confidence 99999999997 899999999999999999999999998 489999999999985
No 20
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=100.00 E-value=4e-51 Score=354.79 Aligned_cols=144 Identities=56% Similarity=1.154 Sum_probs=137.1
Q ss_pred CCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhcCCCCCCCCCCcchhhHHHHHhcC
Q 023507 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQ 215 (281)
Q Consensus 136 lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~g 215 (281)
||++||||++|.|+||||||.||||||||+++++|+++++++++.+.||+|+|+||+. .+.||+||.+..|++|++++|
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~~~~~G 79 (218)
T 1yal_A 1 YPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDK-HSYGCKGGYQTTSLQYVANNG 79 (218)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHHC
T ss_pred CCCcCcCCCCCCCCCCccCccchhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhcC-CCCCCCCCCHHHHHHHHHHcC
Confidence 6999999999999999999999999999999999999999999999999999999996 578999999999999999887
Q ss_pred -------------------------------------------------------------------ceecCccCCCCCc
Q 023507 216 -------------------------------------------------------------------GIFNGVCGTQLDH 228 (281)
Q Consensus 216 -------------------------------------------------------------------Giy~~~~~~~~~H 228 (281)
|||+++|.+..+|
T Consensus 80 i~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~~~~~~~H 159 (218)
T 1yal_A 80 VHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALANQPLSVLVEAGGKPFQLYKSGVFDGPCGTKLDH 159 (218)
T ss_dssp BCBTTTSCCCSSCCCCCGGGCCSCCBCCSEEEECCSSBHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSCCSCCCE
T ss_pred CCccccccccCCCCCcccCcCCCceEEEeeEEEeCCCCHHHHHHHHHhCCEEEEEeccchhccccCCceECCCCCCCCCE
Confidence 8998888888999
Q ss_pred eEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcCC----CccccCCceeeeeC
Q 023507 229 AVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE----GLCGIGTRSSYPLA 281 (281)
Q Consensus 229 av~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~~~~~ 281 (281)
||+|||||++ +|++|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 160 aV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 215 (218)
T 1yal_A 160 AVTAVGYGTS-DGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSYYPFK 215 (218)
T ss_dssp EEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECCCSBSCCGGGTTSSCEEEEC
T ss_pred EEEEEEeecc-CCccEEEEEeCCCCCcccCcEEEEECCCCCCCCccccccceeeEEE
Confidence 9999999997 7899999999999999999999999984 89999999999985
No 21
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=100.00 E-value=7e-51 Score=355.77 Aligned_cols=147 Identities=55% Similarity=1.161 Sum_probs=137.8
Q ss_pred CCCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhcCCCCCCCCCCcchhhHHHHHhc
Q 023507 135 DVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQN 214 (281)
Q Consensus 135 ~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~ 214 (281)
+||++||||++|+|+|||||+.||||||||+++++|+++++++++.+.||+|+|+||+...+.||+||.+..|++|++++
T Consensus 1 ~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~ 80 (229)
T 1s4v_A 1 TVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFIKQR 80 (229)
T ss_dssp CCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCTTBCBCHHHHHHHHHHH
T ss_pred CCCCCEeCCCCCCCCCCccCccchHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhCCCCCCCCCCCCHHHHHHHHHHh
Confidence 48999999999999999999999999999999999999999999999999999999986447899999999999999887
Q ss_pred -C-------------------------------------------------------------------ceecCccCCCC
Q 023507 215 -Q-------------------------------------------------------------------GIFNGVCGTQL 226 (281)
Q Consensus 215 -g-------------------------------------------------------------------Giy~~~~~~~~ 226 (281)
| |||+++|....
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~c~~~~ 160 (229)
T 1s4v_A 81 GGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGTEL 160 (229)
T ss_dssp TCBCBTTTSCCCSSCCCCCHHHHTCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCCCC
T ss_pred CCccccccCCccCCCCCCCCCCCCCcEEEeeeEEEeCCccHHHHHHHHhcCCEEEEEEeCcHHHhhCCCcEECCCCCCCC
Confidence 6 89988888889
Q ss_pred CceEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcCC----CccccCCceeeeeC
Q 023507 227 DHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE----GLCGIGTRSSYPLA 281 (281)
Q Consensus 227 ~Hav~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~~~~~ 281 (281)
+|||+|||||++.+|++|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 161 ~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 219 (229)
T 1s4v_A 161 DHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIK 219 (229)
T ss_dssp CEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred CeEEEEEEeccccCCCCEEEEEeCCCCCccCCcEEEEEcCCCCCCCcCcccccceeeEe
Confidence 99999999999744899999999999999999999999984 89999999999985
No 22
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=100.00 E-value=5.2e-51 Score=353.16 Aligned_cols=144 Identities=43% Similarity=0.901 Sum_probs=135.4
Q ss_pred CCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhcCCCCCCCCCCcchhhHHHHHhc-
Q 023507 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQN- 214 (281)
Q Consensus 136 lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~- 214 (281)
||++||||++|+|+||||||.||||||||+++++|++++++++..+.||+|+|+||+. .+.||+||.+..|++|++++
T Consensus 1 lP~~~DwR~~~~vt~VkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~i~~~~ 79 (214)
T 1m6d_A 1 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDK-MDKACMGGLPSNAYSAIKNLG 79 (214)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS-SSCTTBCCCHHHHHHHHHHHT
T ss_pred CCCcCcCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcC-CCCCCCCCCHHHHHHHHHHhc
Confidence 6999999999999999999999999999999999999999999999999999999997 57899999999999999876
Q ss_pred C----------------------------------------------------------------ceecCc---cCC-CC
Q 023507 215 Q----------------------------------------------------------------GIFNGV---CGT-QL 226 (281)
Q Consensus 215 g----------------------------------------------------------------Giy~~~---~~~-~~ 226 (281)
| |||.++ |.. .+
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~i~~~~~~ik~~l~~~GPV~v~i~~~~f~~Y~~Giy~~~~~~c~~~~~ 159 (214)
T 1m6d_A 80 GLETEDDYSYQGHMQSCQFSAEKAKVYIQDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLI 159 (214)
T ss_dssp CBCBTTTSCCCSSCCCCCCCGGGCCBCCSEEEECCSCHHHHHHHHHHHCCEEEEECTHHHHHCCSSEECCCGGGSCTTCC
T ss_pred CcccccCcCcCCCCCcCCCCcccceEEecCEEEeChHHHHHHHHHHhCCCEEEEEEechhhhcCCceecCCCCcCCCCcC
Confidence 5 898753 765 68
Q ss_pred CceEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcCCCccccCCceeeeeC
Q 023507 227 DHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEGLCGIGTRSSYPLA 281 (281)
Q Consensus 227 ~Hav~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~~~~~ 281 (281)
+|||+|||||++ +|++|||||||||++|||+|||||+|+.|.|||++.++||++
T Consensus 160 ~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~n~Cgi~~~~~~~~~ 213 (214)
T 1m6d_A 160 DHAVLLVGYGQR-SDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 213 (214)
T ss_dssp CEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEESSSCGGGTTTTCEEEEC
T ss_pred CEEEEEEEEeec-CCcEEEEEEeCCCCCcccCcEEEEEcCCCccccCceeEEEEe
Confidence 999999999997 889999999999999999999999999999999999999985
No 23
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=100.00 E-value=2.4e-51 Score=357.46 Aligned_cols=147 Identities=45% Similarity=1.078 Sum_probs=138.8
Q ss_pred CCCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhcCC-CCCCCCCCcchhhHHHHHh
Q 023507 135 DVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTN-GNNGCLGGSREKAFAYIIQ 213 (281)
Q Consensus 135 ~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~~~gC~GG~~~~a~~~~~~ 213 (281)
+||++||||++|+|+|||||+.||||||||+++++|+++++++++.+.||+|+|++|+.. .+.||+||.+..|++|+++
T Consensus 6 ~lP~~~Dwr~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gC~GG~~~~a~~~~~~ 85 (224)
T 3f75_A 6 ELPAGVDWRSRGCVTPVKDQRDCGSCWAFSTTGALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAFQYVLD 85 (224)
T ss_dssp GSCSCEEHHHHTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHHHHHHHHH
T ss_pred CCCCceecccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCCceeCHHHHhhcccCCCCCCCCCCCHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999999999874 3789999999999999997
Q ss_pred -cC------------------------------------------------------------------ceecCccCCCC
Q 023507 214 -NQ------------------------------------------------------------------GIFNGVCGTQL 226 (281)
Q Consensus 214 -~g------------------------------------------------------------------Giy~~~~~~~~ 226 (281)
.| |||++.|...+
T Consensus 86 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~~~~~~~~~l~~~l~~gPV~v~i~~~~~~f~~y~~Giy~~~~~~~~ 165 (224)
T 3f75_A 86 SGGICSEDAYPYLARDEECRAQSCEKVVKILGFKDVPRRSEAAMKAALAKSPVSIAIEADQMPFQFYHEGVFDASCGTDL 165 (224)
T ss_dssp HTCBCBTTTSCCCSSCCCCCGGGSCCCBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTEEEEEECCCCCCCC
T ss_pred hCCccccccCCCcCCCCCCCcCCCCceEEeccEEEeCCChHHHHHHHHcCCCEEEEEeccchhhhcCccceECCCCCCcc
Confidence 56 89987788889
Q ss_pred CceEEEEEeeecC-CCccEEEEEcCCCCCCCCCcEEEEEcCC---CccccCCceeeeeC
Q 023507 227 DHAVTIVGFGTTE-DGANYWLIKNSWGNTWGDAGYMKIVRDE---GLCGIGTRSSYPLA 281 (281)
Q Consensus 227 ~Hav~iVGy~~~~-~g~~ywivkNSWG~~WG~~Gy~~i~~~~---~~Cgi~~~~~~~~~ 281 (281)
+|||+|||||++. ++++|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 166 ~Hav~iVGyg~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~cgi~~~~~~p~~ 224 (224)
T 3f75_A 166 DHGVLLVGYGTDKESKKDFWIMKNSWGTGWGRDGYMYMAMHKGEEGQCGLLLDASFPVM 224 (224)
T ss_dssp CEEEEEEEEEEETTTTEEEEEEECSBCTTSTBTTEEEEESCSCTTCGGGTTSSCEEEEC
T ss_pred CeEEEEEEEecccCCCCCEEEEECCcCcchhhCCEEEEEcCCCCCCcCcccCceeeeeC
Confidence 9999999999874 7889999999999999999999999997 99999999999986
No 24
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=100.00 E-value=8.8e-51 Score=351.48 Aligned_cols=140 Identities=55% Similarity=1.114 Sum_probs=134.3
Q ss_pred CCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhcCCCCCCCCCCcchhhHHHHHhcC
Q 023507 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQ 215 (281)
Q Consensus 136 lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~g 215 (281)
||++||||++|+|+|||||+.||||||||+++++|+++++++++.++||+|+|+||+. .+.||+||.+..|++|++++|
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~~~~~G 79 (213)
T 3ioq_A 1 IPTSIDWRQKGAVTPVRNQGGCGSCWTFSSVAAVEGINKIVTGQLLSLSEQELLDCER-RSYGCRGGFPLYALQYVANSG 79 (213)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHHC
T ss_pred CCCCCCcccCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCcccCHHHhhhhcC-CCCCCCCCCHHHHHHHHHHcC
Confidence 6999999999999999999999999999999999999999999999999999999998 688999999999999999888
Q ss_pred -------------------------------------------------------------------ceecCccCCCCCc
Q 023507 216 -------------------------------------------------------------------GIFNGVCGTQLDH 228 (281)
Q Consensus 216 -------------------------------------------------------------------Giy~~~~~~~~~H 228 (281)
|||..+|...++|
T Consensus 80 i~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~~~~~~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~H 159 (213)
T 3ioq_A 80 IHLRQYYPYEGVQRQCRASQAKGPKVKTDGVGRVPRNNEQALIQRIAIQPVSIVVEAKGRAFQNYRGGIFAGPCGTSIDH 159 (213)
T ss_dssp EEBGGGSCCCSSCCCCCGGGCCSCEECCCEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSCCSCCCE
T ss_pred CCchhccCcCCCCCCCCCCccCCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEEechhhhhhccCCeEcCCCCCccCc
Confidence 8998888888999
Q ss_pred eEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcCC----CccccCCceeeeeC
Q 023507 229 AVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE----GLCGIGTRSSYPLA 281 (281)
Q Consensus 229 av~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~~~~~ 281 (281)
||+|||||+ +|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 160 aV~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 211 (213)
T 3ioq_A 160 AVAAVGYGN-----DYILIKNSWGTGWGEGGYIRIKRGSGNPQGACGVLSDSVFPTK 211 (213)
T ss_dssp EEEEEEEET-----TEEEEECSBCTTSTBTTEEEEESSCSSTTCGGGTTSCCEEEEC
T ss_pred eEEEEecCC-----CeEEEECCCCCCcccCCeEEEEcCCCCCCCcccccCcceEeEe
Confidence 999999985 7999999999999999999999995 89999999999985
No 25
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=100.00 E-value=4.5e-51 Score=354.87 Aligned_cols=144 Identities=47% Similarity=1.048 Sum_probs=135.5
Q ss_pred CCCceeccCCC-CcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhcCC-CCCCCCCCcchhhHHHHHh
Q 023507 136 VPTSLDWRDKG-AVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTN-GNNGCLGGSREKAFAYIIQ 213 (281)
Q Consensus 136 lP~~~Dwr~~g-~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~~~gC~GG~~~~a~~~~~~ 213 (281)
||++||||++| +|+||||||.||||||||+++++|+++++++++.++||+|+|+||+.. .+.||+||.+..|++|+++
T Consensus 1 lP~~~DwR~~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~ 80 (220)
T 8pch_A 1 YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRY 80 (220)
T ss_dssp CCSCEEHHHHSSCSCCCCBCTTSCCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHGGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCEecCcCCCcCCcccccCCCchHHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhCcCccCCCCCCCCCHHHHHHHHHH
Confidence 79999999999 899999999999999999999999999999999999999999999863 4789999999999999998
Q ss_pred c-C------------------------------------------------------------------ceecCc-cCC-
Q 023507 214 N-Q------------------------------------------------------------------GIFNGV-CGT- 224 (281)
Q Consensus 214 ~-g------------------------------------------------------------------Giy~~~-~~~- 224 (281)
+ | |||..+ |..
T Consensus 81 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~~~~~~~~~f~~Y~~Giy~~~~~~~~ 160 (220)
T 8pch_A 81 NKGIMGEDTYPYKGQDDHCKFQPDKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHKT 160 (220)
T ss_dssp HTCEEBTTTSCCCSSCCCCCCCGGGEEECEEEEEECCTTCHHHHHHHHHHTCCEEEEECCCHHHHTCCSSEECCSSCCCS
T ss_pred cCCcCcccccCccCCCCCCCCCCCcceEEeCCEEEeCCCCHHHHHHHHHhcCCEEEEEEeccchhhcCCCcccCCcCCCC
Confidence 8 6 899875 654
Q ss_pred --CCCceEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcCCCccccCCceeeee
Q 023507 225 --QLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEGLCGIGTRSSYPL 280 (281)
Q Consensus 225 --~~~Hav~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~~~~ 280 (281)
.++|||+|||||++ +|++|||||||||+.|||+|||||+|+.|.|||+++++||+
T Consensus 161 ~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~n~cgi~~~~~~~~ 217 (220)
T 8pch_A 161 PDKVNHAVLAVGYGEE-NGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYPI 217 (220)
T ss_dssp TTTCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEEEE
T ss_pred CCcCCcEEEEEEEEcc-CCeeEEEEECCCCcCcccCCEEEEEcCCCccccCCCceeEe
Confidence 68999999999987 89999999999999999999999999999999999999997
No 26
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=100.00 E-value=2.1e-50 Score=350.73 Aligned_cols=146 Identities=50% Similarity=1.052 Sum_probs=135.4
Q ss_pred CCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhcCC-CCCCCCCCcchhhHHHHH-h
Q 023507 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTN-GNNGCLGGSREKAFAYII-Q 213 (281)
Q Consensus 136 lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~~~gC~GG~~~~a~~~~~-~ 213 (281)
||++||||++|+|+||||||.||||||||+++++|+++++++++.+.||+|+|+||+.. .+.||+||.+..|++|++ .
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~g~~gC~GG~~~~a~~y~~~~ 80 (220)
T 2xu3_A 1 APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDN 80 (220)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTTTCCTTBCCCHHHHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCCcccCcccHHHHHHhHHHHHHHHHHhcCCceecCHHHHHhhccCCCCCCCCCCCHHHHHHHHHHh
Confidence 69999999999999999999999999999999999999999999999999999999864 378999999999999996 5
Q ss_pred cC------------------------------------------------------------------ceecCc-cCC-C
Q 023507 214 NQ------------------------------------------------------------------GIFNGV-CGT-Q 225 (281)
Q Consensus 214 ~g------------------------------------------------------------------Giy~~~-~~~-~ 225 (281)
.| |||..+ |.. .
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~ik~~l~~~GPV~v~~~~~~~~f~~Y~~Gvy~~~~c~~~~ 160 (220)
T 2xu3_A 81 GGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSED 160 (220)
T ss_dssp TCEEBTTTSCCCSSCCCCCCCGGGEEECCSEEEECCSCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCSSC
T ss_pred CCcccccccCCcccCcCccCCCCCcceeeeeEEEeCCCHHHHHHHHHhcCCEEEEEeecCcccccccceEEcCCCCCCCC
Confidence 66 899876 875 7
Q ss_pred CCceEEEEEeee---cCCCccEEEEEcCCCCCCCCCcEEEEEcCC-CccccCCceeeeeC
Q 023507 226 LDHAVTIVGFGT---TEDGANYWLIKNSWGNTWGDAGYMKIVRDE-GLCGIGTRSSYPLA 281 (281)
Q Consensus 226 ~~Hav~iVGy~~---~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~Cgi~~~~~~~~~ 281 (281)
++|||+|||||+ +++|++|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 161 ~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WG~~Gy~~i~~~~~n~Cgi~~~~~~p~~ 220 (220)
T 2xu3_A 161 MDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 220 (220)
T ss_dssp CCEEEEEEEEEECCCSSSCCEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEEEC
T ss_pred CCeEEEEEEcCCccccCCCCcEEEEEeCCCCCcccCcEEEEecCCCCcCCccccceeeeC
Confidence 899999999995 347899999999999999999999999995 89999999999985
No 27
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=100.00 E-value=3.5e-50 Score=347.49 Aligned_cols=140 Identities=56% Similarity=1.095 Sum_probs=133.7
Q ss_pred CCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhcCCCCCCCCCCcchhhHHHHHhcC
Q 023507 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQ 215 (281)
Q Consensus 136 lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~g 215 (281)
||++||||++|+|+||||||.||||||||+++++|+++++++++.+.||+|+|+||+. .+.||+||.+..|++|++++|
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~CGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~yi~~~G 79 (212)
T 2cio_A 1 IPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNQYSEQELLDCDR-RSYGCNGGYPWSALQLVAQYG 79 (212)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHTC
T ss_pred CCCcccCCCCCCCCCCccCCccchHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhCC-CCCCCCCCCHHHHHHHHHHhC
Confidence 6999999999999999999999999999999999999999999999999999999997 578999999999999999887
Q ss_pred -------------------------------------------------------------------ceecCccCCCCCc
Q 023507 216 -------------------------------------------------------------------GIFNGVCGTQLDH 228 (281)
Q Consensus 216 -------------------------------------------------------------------Giy~~~~~~~~~H 228 (281)
|||+++|....+|
T Consensus 80 i~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~~~~~~H 159 (212)
T 2cio_A 80 IHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGNKVDH 159 (212)
T ss_dssp BCBTTTSCCCSSCCCCCTTTTCSCSBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCSCCCE
T ss_pred cCcccccCCcCCCCCcCCCCCCCceEEEeeEEEeCCccHHHHHHHHHhCCEEEEEeccCcchhhcCCceecCCCCCCCCE
Confidence 8998888888999
Q ss_pred eEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcCC----CccccCCceeeeeC
Q 023507 229 AVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE----GLCGIGTRSSYPLA 281 (281)
Q Consensus 229 av~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~~~~~ 281 (281)
||+|||||+ +|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 160 aV~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 211 (212)
T 2cio_A 160 AVAAVGYGP-----NYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVK 211 (212)
T ss_dssp EEEEEEEET-----TEEEEECSBCTTSTBTTEEEEECSSSCTTCGGGTTSCCEEEEC
T ss_pred EEEEEEecC-----CeEEEEeCCCCCcccCcEEEEEcCCCCCCCccCcccceeEEEe
Confidence 999999996 8999999999999999999999985 89999999999985
No 28
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=100.00 E-value=1.5e-50 Score=352.12 Aligned_cols=144 Identities=33% Similarity=0.641 Sum_probs=134.0
Q ss_pred CCCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhcCCCCCCCCCCcchhhHHHHHhc
Q 023507 135 DVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQN 214 (281)
Q Consensus 135 ~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~ 214 (281)
+||++||||++|+|+||||||.||||||||+++++|+++++++++.++||+|+|+||+. +.||+||.+..|++|++++
T Consensus 9 ~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~~~~~~~~~lS~q~l~dc~~--~~gC~GG~~~~a~~~~~~~ 86 (222)
T 3f5v_A 9 NAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRQQSLDLAEQELVDCAS--QHGCHGDTIPRGIEYIQHN 86 (222)
T ss_dssp CCCSCEEHHHHTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC--SSTTBCCCHHHHHHHHHHH
T ss_pred CCCCCCCCccCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhCcC--CCCCCCCCHHHHHHHHHHc
Confidence 79999999999999999999999999999999999999999999999999999999997 6899999999999999988
Q ss_pred C--------------------------------------------------------------------ceecC-cc-CC
Q 023507 215 Q--------------------------------------------------------------------GIFNG-VC-GT 224 (281)
Q Consensus 215 g--------------------------------------------------------------------Giy~~-~~-~~ 224 (281)
| |+|.. .| ..
T Consensus 87 Gi~~e~~yPY~~~~~~C~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~~gpV~v~~~~~~~~~f~~Y~~gi~~~~~~~~~ 166 (222)
T 3f5v_A 87 GVVQESYYRYVAREQSCRRPNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQRDNGYQ 166 (222)
T ss_dssp CEEBGGGSCCCSSCCCCCCCSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCCSSSCBCCCCSSS
T ss_pred CCCchhhCCCcccCCCccCCcCcceeeccEEEeCCCCHHHHHHHHHhcCCCEEEEEEeccchhhhccCCCceecCCCCCC
Confidence 8 44332 23 45
Q ss_pred CCCceEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcCCCccccCCceeeeeC
Q 023507 225 QLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEGLCGIGTRSSYPLA 281 (281)
Q Consensus 225 ~~~Hav~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~~~~~ 281 (281)
.++|||+|||||++ +|++|||||||||++|||+|||||+|+.|.|||+++++||++
T Consensus 167 ~~~HaV~iVGyg~~-~g~~ywivkNSWG~~WGe~Gy~~i~r~~n~cgi~~~~~~p~~ 222 (222)
T 3f5v_A 167 PNYHAVNIVGYSNA-QGVDYWIVRNSWDTNWGDNGYGYFAANIDLMMIEEYPYVVIL 222 (222)
T ss_dssp CEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEEEEC
T ss_pred ccCcEEEEEEEecc-CCCEEEEEEcCCCCCcccCCEEEEEcCCCeecCCCceeEEeC
Confidence 68999999999987 899999999999999999999999999999999999999986
No 29
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=100.00 E-value=4.3e-50 Score=356.85 Aligned_cols=148 Identities=55% Similarity=1.202 Sum_probs=137.6
Q ss_pred CCCCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhcCCCCCCCCCCcchhhHHHHHh
Q 023507 134 TDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQ 213 (281)
Q Consensus 134 ~~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~ 213 (281)
++||++||||++|+|+||||||.||||||||+++++|+++++++++.+.||+|+|+||+...+.||+||.+..|++|+++
T Consensus 2 ~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~~yi~~ 81 (262)
T 2fo5_A 2 SDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKN 81 (262)
T ss_dssp -CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCGGGCBCHHHHHHHHHH
T ss_pred CCCCCcccCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhcCCCCCCCCCCCHHHHHHHHHH
Confidence 37999999999999999999999999999999999999999999999999999999998644789999999999999988
Q ss_pred c-C----------------------------------------------------------------------ceecCcc
Q 023507 214 N-Q----------------------------------------------------------------------GIFNGVC 222 (281)
Q Consensus 214 ~-g----------------------------------------------------------------------Giy~~~~ 222 (281)
+ | |||+.+|
T Consensus 82 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~i~~y~~v~~~~e~~ik~al~~GPV~v~i~~~~~~f~~Y~sGVy~~~c 161 (262)
T 2fo5_A 82 NGGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGEC 161 (262)
T ss_dssp TTCEEBTTTSCCCSSCCCCCHHHHHHHCCCEECCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCC
T ss_pred cCCcCchhcCCCcCccCccCCcccccCCceeEEeceEEEcCCchHHHHHHHHHhCCEEEEEecChHHHhccCCceECCCC
Confidence 7 5 8998888
Q ss_pred CCCCCceEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcCC----CccccCCceeeeeC
Q 023507 223 GTQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE----GLCGIGTRSSYPLA 281 (281)
Q Consensus 223 ~~~~~Hav~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~~~~~ 281 (281)
....+|||+|||||++.+|++|||||||||++|||+|||||+|+. |.|||++.++||++
T Consensus 162 ~~~~~HaV~IVGyg~~~~G~~YWivkNSWG~~WGe~GY~ri~r~~n~~~~~CgI~~~~~~p~~ 224 (262)
T 2fo5_A 162 GTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVK 224 (262)
T ss_dssp CCCCCEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEESSCSCTTCGGGTTTSCEEEEC
T ss_pred CCcCCEEEEEEEEcccCCCceEEEEEeCCCCCCCCCeEEEEEcCCCCCCCccceeeeeeEEEe
Confidence 888899999999999756899999999999999999999999985 56999999999985
No 30
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=100.00 E-value=4.3e-50 Score=345.92 Aligned_cols=140 Identities=57% Similarity=1.201 Sum_probs=133.5
Q ss_pred CCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhcCCCCCCCCCCcchhhHHHHHhc-
Q 023507 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQN- 214 (281)
Q Consensus 136 lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~- 214 (281)
||++||||++|+|+||||||.||||||||+++++|+++++++++.++||+|+|+||+. .+.||+||.+..|++|++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~y~~~~~ 79 (208)
T 1o0e_A 1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDK-KNHGCLGGAFVFAYQYIINNG 79 (208)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHHT
T ss_pred CCCcCcCCCCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCceecCHHHhhhhcC-CCCCCCCCCHHHHHHHHHHhC
Confidence 6999999999999999999999999999999999999999999999999999999997 57899999999999999887
Q ss_pred C----------------------------------------------------------------ceecCccCCCCCceE
Q 023507 215 Q----------------------------------------------------------------GIFNGVCGTQLDHAV 230 (281)
Q Consensus 215 g----------------------------------------------------------------Giy~~~~~~~~~Hav 230 (281)
| |||+++|....+|||
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~~~~HaV 159 (208)
T 1o0e_A 80 GIDTQANYPYKAVQGPCQAASKVVSIDGYNGVPFCNEXALKQAVAVQPSTVAIDASSAQFQQYSSGIFSGPCGTKLNHGV 159 (208)
T ss_dssp CBCBTTTSCCCSSCCCCCCCCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCSCCCEEE
T ss_pred CcCcccccCccCCCCcCCCCCceEEeCeEEEeCCCCHHHHHHHHHhCCEEEEEEccCcccccccCceECCCCCCcCCEEE
Confidence 5 899888988899999
Q ss_pred EEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcCC--CccccCCceeeeeC
Q 023507 231 TIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE--GLCGIGTRSSYPLA 281 (281)
Q Consensus 231 ~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~--~~Cgi~~~~~~~~~ 281 (281)
+|||||+ +|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 160 ~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~Cgi~~~~~~p~~ 207 (208)
T 1o0e_A 160 TIVGYQA-----NYWIVRNSWGRYWGEKGYIRMLRVGGCGLCGIARLPYYPTK 207 (208)
T ss_dssp EEEEECS-----SEEEEECSBCTTSTBTTEEEEECCSTTCGGGTTSSCEEEEC
T ss_pred EEEEeCC-----CeEEEEcCCCCcccCCcEEEEEcCCCCCcCCCcccceeeec
Confidence 9999996 8999999999999999999999996 99999999999985
No 31
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=100.00 E-value=1.8e-50 Score=351.59 Aligned_cols=145 Identities=49% Similarity=1.030 Sum_probs=130.8
Q ss_pred CCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhcCCCCCCCCCCcchhhHHHHHhc-
Q 023507 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQN- 214 (281)
Q Consensus 136 lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~- 214 (281)
||++||||++|+|+|||||+.||||||||+++++|+++++++++.+.||+|+|+||+. .+.||+||.+..|++|++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGSCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~~~~~~ 79 (222)
T 3u8e_A 1 APASIDWRKKGAVTSVKDQGACGMCWAFGATGAIEGIDAITTGRLISVSEQQIVDCDT-XXXXXXGGDADDAFRWVITNG 79 (222)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSCSSCTTTTHHHHHHHHHHHHHSCCCCBCHHHHHHHCC-------CCCHHHHHHHHHHHT
T ss_pred CCCcCcCCcCCCCCCcccCCCCccHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhccC-cccccCCCCHHHHHHHHHHcC
Confidence 7999999999999999999999999999999999999999999999999999999998 48899999999999999998
Q ss_pred C-----------------------------------------------------------------ceecC-ccCC---C
Q 023507 215 Q-----------------------------------------------------------------GIFNG-VCGT---Q 225 (281)
Q Consensus 215 g-----------------------------------------------------------------Giy~~-~~~~---~ 225 (281)
| |||+. +|.. .
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~~~~~~i~~~~~v~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~~Giy~~~~~~~~~~~ 159 (222)
T 3u8e_A 80 GIASDANYPYTGVDGTCDLNKPIAARIDGYTNVPNSSSALLDAVAKQPVSVNIYTSSTSFQLYTGPGIFAGSSCSDDPAT 159 (222)
T ss_dssp CBCBTTTSCCCSSCCCCCCCSCCCBCCCEEEECCSCHHHHHHHHHHSCEEEEECCCSHHHHTCCCSSCBCCTTCCCCGGG
T ss_pred CccchhcCCCcccCCccccCCCCeEEEccEEEeCCcHHHHHHHHhCCCEEEEEEecChhhhcEeCCceECCCcccCCCCc
Confidence 6 68887 5876 6
Q ss_pred CCceEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcCCC----ccccCCceeeeeC
Q 023507 226 LDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEG----LCGIGTRSSYPLA 281 (281)
Q Consensus 226 ~~Hav~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~----~Cgi~~~~~~~~~ 281 (281)
++|||+|||||++.++++|||||||||++|||+|||||+|+.| .|||+++++||++
T Consensus 160 ~~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~g~Cgi~~~~~~p~~ 219 (222)
T 3u8e_A 160 VDHTVLIVGYGSNGTNADYWIVKNSWGTEWGIDGYILIRRNTNRPDGVCAIDAWGSYPTK 219 (222)
T ss_dssp CCEEEEEEEEEESSTTCEEEEEECSBCTTSTBTTEEEEECSCSCTTCGGGTTSSCEEEEC
T ss_pred CCEEEEEEEEeecCCCCcEEEEECCCCCCcccCCEEEEEcCCCCCCCcCCccccceEEEE
Confidence 8999999999987338999999999999999999999999966 9999999999985
No 32
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=100.00 E-value=8.3e-50 Score=345.59 Aligned_cols=140 Identities=55% Similarity=1.139 Sum_probs=133.6
Q ss_pred CCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhcCCCCCCCCCCcchhhHHHHHhcC
Q 023507 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQ 215 (281)
Q Consensus 136 lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~g 215 (281)
||++||||++|+|+||||||.||||||||+++++|+++++++++.+.||+|+|+||+. .+.||+||.+..|++|++++|
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~y~~~~G 79 (214)
T 2bdz_A 1 YPESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCER-RSHGCDGGYQTTSLQYVVDNG 79 (214)
T ss_dssp CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCBCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHHC
T ss_pred CCCcEeCCCCCCCCCCccCCCCccHHHHHhHHHHHHHHHHhcCCccccCHHHHHhhcC-CCCCCCCCCHHHHHHHHHHhC
Confidence 6999999999999999999999999999999999999999999999999999999997 578999999999999999888
Q ss_pred -------------------------------------------------------------------ceecCccCCCCCc
Q 023507 216 -------------------------------------------------------------------GIFNGVCGTQLDH 228 (281)
Q Consensus 216 -------------------------------------------------------------------Giy~~~~~~~~~H 228 (281)
|||+.+|...++|
T Consensus 80 i~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~i~~~~~~f~~Y~~Giy~~~~~~~~~H 159 (214)
T 2bdz_A 80 VHTEREYPYEKKQGRCRAKDKKGPKVYITGYKYVPANDEISLIQAIANQPVSVVTDSRGRGFQFYKGGIYEGPCGTNTDH 159 (214)
T ss_dssp EEBTTTSCCCSSCCCCCTTTCCSCEECCCEEEEECSSBHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCSCCSCCCE
T ss_pred CCccccCCCCCCCCCCCCCCCCCceeeecCEEEeCCCcHHHHHHHHHhCCEEEEEeeChhHhhcccCceecCCCCCCCCe
Confidence 8998889888999
Q ss_pred eEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcCC----CccccCCceeeeeC
Q 023507 229 AVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE----GLCGIGTRSSYPLA 281 (281)
Q Consensus 229 av~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~~~~~ 281 (281)
||+|||||+ +|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 160 aV~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 211 (214)
T 2bdz_A 160 AVTAVGYGK-----TYLLLKNSWGPNWGEKGYIRIKRASGRSKGTCGVYTSSFFPIK 211 (214)
T ss_dssp EEEEEEECS-----SEEEEECSBCTTSTBTTEEEEECCCSBSSCGGGTTSCEEEEEC
T ss_pred EEEEEEcCC-----CeEEEEeCCCCCcccCCEEEEEcCCCCCCCcccccccceEEEe
Confidence 999999996 8999999999999999999999985 89999999999985
No 33
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=100.00 E-value=1.1e-49 Score=350.82 Aligned_cols=146 Identities=49% Similarity=0.969 Sum_probs=136.2
Q ss_pred CCCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhcCCCCCCCCCCcchhhHHHHHh-
Q 023507 135 DVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQ- 213 (281)
Q Consensus 135 ~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~- 213 (281)
+||++||||++|+|+||||||.||||||||+++++|+++++++++.+.||+|+|+||+. .+.||+||.+..|++|+++
T Consensus 17 ~lP~~~DwR~~~~vtpVkdQg~CGsCWAFaa~~alE~~~~i~~~~~~~lSeq~l~dC~~-~~~gC~GG~~~~a~~yi~~~ 95 (241)
T 2oul_A 17 FDHAAYDWRLHSGVTPVKDQKNCGSCWAFSSIGSVESQYAIRKNKLITLSEQELVDCSF-KNYGCNGGLINNAFEDMIEL 95 (241)
T ss_dssp CCSSCEEGGGTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHCT-TSCTTBCBCHHHHHHHHHHT
T ss_pred cCCCccccCcCCCCCCCccCccchHHHHHHHHHHHHHHHHHhcCCCcccCHHHHHhhcC-CCCCCCCCCHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999997 4789999999999999987
Q ss_pred cC----------------------------------------------------------------ceecCccCCCCCce
Q 023507 214 NQ----------------------------------------------------------------GIFNGVCGTQLDHA 229 (281)
Q Consensus 214 ~g----------------------------------------------------------------Giy~~~~~~~~~Ha 229 (281)
.| |||+++|...++||
T Consensus 96 ~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~lGPV~v~i~~~~~f~~Y~~Giy~~~c~~~~~Ha 175 (241)
T 2oul_A 96 GGICPDGDYPYVSDAPNLCNIDRCTEKYGIKNYLSVPDNKLKEALRFLGPISISVAVSDDFAFYKEGIFDGECGDQLNHA 175 (241)
T ss_dssp TSBCBTTSSCCCTTSCCCCCTTSSSCCBCCSEEEECCTTCHHHHHHHTCCEEEEECBCHHHHTCCSSBCCSCBCSSCCEE
T ss_pred CCcCccccCCCcCCCCCcCCCCCCccceeeeeEEEeCCCCHHHHHHhhCCEEEEEecCcchhhcCCcEEcCcCCCCCCEE
Confidence 45 88888887779999
Q ss_pred EEEEEeeecC---------CCccEEEEEcCCCCCCCCCcEEEEEcCCCc----cccCCceeeeeC
Q 023507 230 VTIVGFGTTE---------DGANYWLIKNSWGNTWGDAGYMKIVRDEGL----CGIGTRSSYPLA 281 (281)
Q Consensus 230 v~iVGy~~~~---------~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~----Cgi~~~~~~~~~ 281 (281)
|+|||||++. .|++|||||||||++|||+|||||+|+.|. |||++.++||++
T Consensus 176 V~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 240 (241)
T 2oul_A 176 VMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIETDESGLMRKCGLGTDAFIPLI 240 (241)
T ss_dssp EEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCGGGTTSSEEEEEC
T ss_pred EEEEEeccccccccccccCCCCCEEEEEeCCCCCcccCCEEEEEcCCCCCCCcCCccceEEEEee
Confidence 9999999872 278999999999999999999999999666 999999999985
No 34
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=100.00 E-value=1.4e-49 Score=350.93 Aligned_cols=145 Identities=44% Similarity=1.010 Sum_probs=135.8
Q ss_pred CCCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhcCCCCCCCCCCcchhhHHHHHhc
Q 023507 135 DVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQN 214 (281)
Q Consensus 135 ~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~ 214 (281)
+||++||||++|+|+||||||.||||||||+++++|+++++++++.+.||+|+|+||+. .+.||+||.+..|++|++++
T Consensus 1 ~lP~~~DwR~~g~vtpVkdQg~CGsCWAfa~~~~lE~~~~i~~g~~~~LS~q~lvdC~~-~~~gC~GG~~~~a~~y~~~~ 79 (246)
T 2b1m_A 1 DAPESWDWSKKGVITKVKFQGQCGSGWAFSATGAIEAAHAIATGNLVSLSEQELIDCVD-ESEGCYNGWHYQSFEWVVKH 79 (246)
T ss_dssp -CCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSBTTTBCCHHHHHHHHHHT
T ss_pred CCCCcCCCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhcC-CCCCCCCCCHHHHHHHHHHh
Confidence 48999999999999999999999999999999999999999999999999999999997 57899999999999999887
Q ss_pred -C-----------------------------------------------------------------------ceecC-c
Q 023507 215 -Q-----------------------------------------------------------------------GIFNG-V 221 (281)
Q Consensus 215 -g-----------------------------------------------------------------------Giy~~-~ 221 (281)
| |||+. .
T Consensus 80 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y~~~~~v~~~~~~~ik~~l~~~~~~GPV~v~i~~~~f~~Y~~Giy~~~~ 159 (246)
T 2b1m_A 80 GGIASEADYPYKARDGKCKANEIQDKVTIDNYGVQILSNESTESEAESSLQSFVLEQPISVSIDAKDFHFYSGGIYDGGN 159 (246)
T ss_dssp TCBCBTTTSCCCSSCCCCCGGGCCCCBCCSEEEEEECCTTSCHHHHHHHHHHHHHHSCEEEEECCTTGGGCCSSEECCTT
T ss_pred CCcCccccccccCCCCcCcCCCCCCceeEcCcceeeecCCChHHHHHHHHHhhccCCCEEEEEEcchhhcccceeecCCC
Confidence 5 78877 4
Q ss_pred cCCC--CCceEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcCC----CccccCCceeeeeC
Q 023507 222 CGTQ--LDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE----GLCGIGTRSSYPLA 281 (281)
Q Consensus 222 ~~~~--~~Hav~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~~~~~ 281 (281)
|... ++|||+|||||++ +|++|||||||||++|||+|||||+|+. |.|||++.++||++
T Consensus 160 c~~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~n~CgI~~~~~~p~~ 224 (246)
T 2b1m_A 160 CSSPYGINHFVLIVGYGSE-DGVDYWIAKNSWGEDWGIDGYIRIQRNTGNLLGVCGMNYFASYPII 224 (246)
T ss_dssp CCSSCCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECCSSCTTCGGGTTSEEEEEEC
T ss_pred CCCCCcCceEEEEEEEecc-CCceEEEEEeCCCCcccCCcEEEEEcCCCCCCccccccceeeEEEe
Confidence 8764 8999999999997 8999999999999999999999999996 99999999999985
No 35
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=100.00 E-value=1.5e-49 Score=350.18 Aligned_cols=146 Identities=45% Similarity=0.921 Sum_probs=136.0
Q ss_pred CCCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhcCCCCCCCCCCcchhhHHHHHh-
Q 023507 135 DVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQ- 213 (281)
Q Consensus 135 ~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~- 213 (281)
+||++||||++|+|+||||||.||||||||+++++|++++++++..+.||+|+|+||+. .+.||+||.+..|++|+++
T Consensus 19 ~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~alE~~~~i~~~~~~~lSeq~lvdC~~-~~~gC~GG~~~~a~~y~~~~ 97 (243)
T 3bwk_A 19 LDRIAYDWRLHGGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALFLFSEQELVDCSV-KNNGCYGGYITNAFDDMIDL 97 (243)
T ss_dssp CCCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCSCCCBCHHHHHHHCT-TSCGGGCCCHHHHHHHHHHT
T ss_pred cCCCceecCcCCCCCCCccCCCCchHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcC-CCCCCCCCCHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999997 4789999999999999987
Q ss_pred cC----------------------------------------------------------------ceecCccCCCCCce
Q 023507 214 NQ----------------------------------------------------------------GIFNGVCGTQLDHA 229 (281)
Q Consensus 214 ~g----------------------------------------------------------------Giy~~~~~~~~~Ha 229 (281)
.| |||++.|...++||
T Consensus 98 ~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~lGPV~v~i~~~~~f~~Y~~Giy~~~c~~~~~Ha 177 (243)
T 3bwk_A 98 GGLCSQDDYPYVSNLPETCNLKRCNERYTIKSYVSIPDDKFKEALRYLGPISISIAASDDFAFYRGGFYDGECGAAPNHA 177 (243)
T ss_dssp TSBCBTTTSCCCTTSCCCCCGGGCSSCBCCCEEEECCTTCHHHHHHHTCCEEEEECCCHHHHTCCSSSCCCCCCSSCCEE
T ss_pred CCcccccccCCcCCCCCcCCCCCCccceeeeeEEEeCCCCHHHHHHhhCCEEEEEecChhHHhcCCceecCCCCCcCCeE
Confidence 45 88887787669999
Q ss_pred EEEEEeeecC---------CCccEEEEEcCCCCCCCCCcEEEEEcCCCc----cccCCceeeeeC
Q 023507 230 VTIVGFGTTE---------DGANYWLIKNSWGNTWGDAGYMKIVRDEGL----CGIGTRSSYPLA 281 (281)
Q Consensus 230 v~iVGy~~~~---------~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~----Cgi~~~~~~~~~ 281 (281)
|+|||||++. .|++|||||||||++|||+|||||+|+.|. |||++.++||++
T Consensus 178 V~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 242 (243)
T 3bwk_A 178 VILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDENGYKKTCSIGTEAYVPLL 242 (243)
T ss_dssp EEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCSTTTTSSEEEEEC
T ss_pred EEEEEecCccccccccccCCCCCEEEEEeCCCCCcCCCcEEEEEcCCCCCCCcCCccceEEEEec
Confidence 9999999872 278999999999999999999999999666 999999999985
No 36
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=100.00 E-value=3.5e-48 Score=343.67 Aligned_cols=145 Identities=38% Similarity=0.812 Sum_probs=129.4
Q ss_pred CCCCceeccCC----CCcCcccCCCCcchhHHHHHHHHHHHHHHHHcC--CCCCCCHHHHhhhcCCCCCCCCCCcchhhH
Q 023507 135 DVPTSLDWRDK----GAVTPIKNQKECGCCWAFAAVAAVEGITKIRSG--NLIQLSEQQLLDCSTNGNNGCLGGSREKAF 208 (281)
Q Consensus 135 ~lP~~~Dwr~~----g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~--~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~ 208 (281)
+||++||||++ +.|+||||||.||||||||++++||++++++++ ..+.||+|+|+||+...+.||+||.+..|+
T Consensus 2 ~lP~s~D~R~~~~~~~~vtpVkdQg~CGSCWAFaa~~ale~~~~i~~~~~~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~ 81 (254)
T 3qsd_A 2 EIPSSFDSRKKWPRCKSIATIRDQSRCGSCWAFGAVEAMSDRSCIQSGGKQNVELSAVDLLSCCESCGLGCEGGILGPAW 81 (254)
T ss_dssp CCCSCEEHHHHCTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTCCCCCBCHHHHHHHCTTSBCTTBCBCHHHHH
T ss_pred CCCCcCccccccCCCCccCCCCCcccCccHHHHHHHHHHHHHHHHHhCCCccccCCHHHHHhhhcCCCCCCCCCCHHHHH
Confidence 69999999998 689999999999999999999999999999976 678999999999987556899999999999
Q ss_pred HHHHhcC-------------------------------------------------------------------------
Q 023507 209 AYIIQNQ------------------------------------------------------------------------- 215 (281)
Q Consensus 209 ~~~~~~g------------------------------------------------------------------------- 215 (281)
+|++++|
T Consensus 82 ~yi~~~Gi~~e~~y~~~~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (254)
T 3qsd_A 82 DYWVKEGIVTGSSKENHAGCEPYPFPKCEHHTKGKYPPCGSKIYKTPRCKQTCQKKYKTPYTQDKHRGKSSYNVKNDEKA 161 (254)
T ss_dssp HHHHHTCBCBCCCTTTCCSSSCCSSCCCBCSSCSSSCBCCSCCCCCCCCCCCCCTTCCSCGGGGCBCCSEEEECCSCHHH
T ss_pred HHHHHcCCCcccccccCcCcCCcccccccccccCcCCCCcccccCCccccccccCCccceeeeeeeeeeeeEecCCcHHH
Confidence 9986542
Q ss_pred --------------------------ceecCccCC-CCCceEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcCCC
Q 023507 216 --------------------------GIFNGVCGT-QLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEG 268 (281)
Q Consensus 216 --------------------------Giy~~~~~~-~~~Hav~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~ 268 (281)
|||.++|.. .++|||+|||||++ +|++|||||||||+.|||+|||||+|+.|
T Consensus 162 i~~~l~~~gPv~~~~~~~~~f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~~-~g~~ywivkNSWG~~WG~~Gy~~i~rg~n 240 (254)
T 3qsd_A 162 IQKEIMKYGPVEAGFTVYEDFLNYKSGIYKHITGETLGGHAIRIIGWGVE-NKAPYWLIANSWNEDWGENGYFRIVRGRD 240 (254)
T ss_dssp HHHHHHHHCCEEEEEEEEGGGGGCCSSEECCCSSCEEEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSC
T ss_pred HHHHHHHcCCEEEEEEeccccccccCCeeccCCCCCCCCeEEEEEEEeec-CCeeEEEEEeCCCCCcccCCeEEEEcCCC
Confidence 566555332 35899999999997 89999999999999999999999999999
Q ss_pred ccccCCceeeee
Q 023507 269 LCGIGTRSSYPL 280 (281)
Q Consensus 269 ~Cgi~~~~~~~~ 280 (281)
.|||++.++..+
T Consensus 241 ~CgI~~~~~~~~ 252 (254)
T 3qsd_A 241 ECSIESEVTAGR 252 (254)
T ss_dssp GGGTTSSEEEEE
T ss_pred eecCCCceEeec
Confidence 999999998754
No 37
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=100.00 E-value=5.6e-47 Score=338.04 Aligned_cols=145 Identities=34% Similarity=0.778 Sum_probs=128.5
Q ss_pred CCCCceeccCC----CCcCcccCCCCcchhHHHHHHHHHHHHHHHHcC--CCCCCCHHHHhhhcCC-CCCCCCCCcchhh
Q 023507 135 DVPTSLDWRDK----GAVTPIKNQKECGCCWAFAAVAAVEGITKIRSG--NLIQLSEQQLLDCSTN-GNNGCLGGSREKA 207 (281)
Q Consensus 135 ~lP~~~Dwr~~----g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~--~~~~lS~q~l~dc~~~-~~~gC~GG~~~~a 207 (281)
+||++||||++ +.|+||||||.||||||||+++++|++++++++ ..+.||+|+|+||+.. .+.||+||.+..|
T Consensus 6 ~lP~~~D~R~~w~~~~~vt~VkdQg~CGSCWAfa~~~ale~~~~i~~~~~~~~~LS~q~lvdC~~~~~~~gC~GG~~~~a 85 (266)
T 3cbj_A 6 KLPASFDAREQWPQCPTIKEIRDQGSCGSAWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEA 85 (266)
T ss_dssp CCCSCEEHHHHSTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHCGGGGBCTTBCBCHHHH
T ss_pred CCCccCcchhccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHhCCCCccccCHHHHHhhccccCCCCCCCCCHHHH
Confidence 79999999986 789999999999999999999999999999875 3789999999999863 3689999999999
Q ss_pred HHHHHhcC------------------------------------------------------------------------
Q 023507 208 FAYIIQNQ------------------------------------------------------------------------ 215 (281)
Q Consensus 208 ~~~~~~~g------------------------------------------------------------------------ 215 (281)
++|++++|
T Consensus 86 ~~y~~~~Gi~~~~~Y~~~e~~~PY~~~~~~~~~~~~~~~C~~~~~~p~c~~~c~~~~~~~~~~~~~~~~~~~~v~~~~~~ 165 (266)
T 3cbj_A 86 WNFWTRKGLVSGGLYESHVGCRPYSIPPCEAHVNGARPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKD 165 (266)
T ss_dssp HHHHHHTCBCBCCSTTCCCSSSCCCSCCCSCCCSCSSCCCCSCCCCCCCCCSCCTTCCSCTGGGCBCBSCCEECCSCHHH
T ss_pred HHHHHHhCcCcCccccccccccCcccccccccccCCCCCCccccCCCccccccCCCCcceeeeeeeeeeeeEEeCCCHHH
Confidence 99875321
Q ss_pred --------------------------ceecCccCC-CCCceEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcCCC
Q 023507 216 --------------------------GIFNGVCGT-QLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEG 268 (281)
Q Consensus 216 --------------------------Giy~~~~~~-~~~Hav~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~ 268 (281)
|||.++|.. .++|||+|||||++ +|++|||||||||+.|||+|||||+|+.|
T Consensus 166 i~~~i~~~GPV~v~i~~~~~f~~Y~~Gvy~~~~~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~rg~n 244 (266)
T 3cbj_A 166 IMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGVE-NGTPYWLVANSWNTDWGDNGFFKILRGQD 244 (266)
T ss_dssp HHHHHHHHCCEEEEEEEEGGGGGCCSSEECCCSSCEEEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSC
T ss_pred HHHHHHhcCCEEEEEEeccchhhcCCeEEecCCCCccCCeEEEEEEeccc-CCceEEEEEcCCCCccCCCCEEEEEcCCC
Confidence 666665443 35899999999997 89999999999999999999999999999
Q ss_pred ccccCCceeeee
Q 023507 269 LCGIGTRSSYPL 280 (281)
Q Consensus 269 ~Cgi~~~~~~~~ 280 (281)
.|||++.+++++
T Consensus 245 ~cgI~~~~~~~~ 256 (266)
T 3cbj_A 245 HCGIESEVVAGI 256 (266)
T ss_dssp GGGTTTSCEECC
T ss_pred cccccCceEEEE
Confidence 999999999875
No 38
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=100.00 E-value=1.9e-46 Score=336.29 Aligned_cols=144 Identities=33% Similarity=0.741 Sum_probs=131.2
Q ss_pred CCCCCceeccCC---CCcCcccCCC---CcchhHHHHHHHHHHHHHHHHcC-C--CCCCCHHHHhhhcCCCCCCCCCCcc
Q 023507 134 TDVPTSLDWRDK---GAVTPIKNQK---ECGCCWAFAAVAAVEGITKIRSG-N--LIQLSEQQLLDCSTNGNNGCLGGSR 204 (281)
Q Consensus 134 ~~lP~~~Dwr~~---g~v~pv~dQg---~cgsCwAfa~~~~le~~~~~~~~-~--~~~lS~q~l~dc~~~~~~gC~GG~~ 204 (281)
.+||++||||++ ++|+|||||+ .||||||||+++++|++++++++ . .+.||+|+|+||+. ..||+||++
T Consensus 34 ~~lP~~~DwR~~~~~~~vtpVkdQg~~~~CGSCWAfa~~~alE~~~~i~~~g~~~~~~LS~Q~lvdC~~--~~gC~GG~~ 111 (277)
T 1deu_A 34 ADLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGN--AGSCEGGND 111 (277)
T ss_dssp GGSCSCEETTSBTTBCCCCCCCBTTCSSCCBCHHHHHHHHHHHHHHHHHTTTCSSCCCBCHHHHHHHSS--SEETBEECH
T ss_pred ccCCCceecccCCCCCcCCccccCCCCCCCcchHHHHHHHHHHHHHHHHhCCCCCCcccCHHHHHhCcC--CCCCCCCCH
Confidence 479999999998 6799999999 99999999999999999999875 3 47999999999997 379999999
Q ss_pred hhhHHHHHhcC---------------------------------------------------------------------
Q 023507 205 EKAFAYIIQNQ--------------------------------------------------------------------- 215 (281)
Q Consensus 205 ~~a~~~~~~~g--------------------------------------------------------------------- 215 (281)
..|++|++++|
T Consensus 112 ~~a~~yi~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~c~~~~~~~~~~i~~y~~v~~~~~i~~~i~~~GPV~v~i~ 191 (277)
T 1deu_A 112 LSVWDYAHQHGIPDETCNNYQAKDQECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLSGREKMMAEIYANGPISCGIM 191 (277)
T ss_dssp HHHHHHHHHTCBCBGGGSCCCSSCCCCCHHHHSEEEEETTEEEECSSCCCBCEEEEEEECSHHHHHHHHHHHCCEEEEEC
T ss_pred HHHHHHHHHcCCCcCccCCCcCCCCCccccccccccccCcccccccCcceEEeceeEecCCHHHHHHHHHHcCCEEEEEe
Confidence 99999987655
Q ss_pred ----------ceecCc-cCCCCCceEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcCCC--------ccccCCce
Q 023507 216 ----------GIFNGV-CGTQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEG--------LCGIGTRS 276 (281)
Q Consensus 216 ----------Giy~~~-~~~~~~Hav~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~--------~Cgi~~~~ 276 (281)
|||..+ |...++|||+|||||++ +|++|||||||||++|||+|||||+|+.| .|||++++
T Consensus 192 ~~~~f~~Y~~GIy~~~~~~~~~~HaV~iVGyg~~-~g~~YWivkNSWG~~WGe~GY~~i~rg~n~~g~g~~~~cgIe~~~ 270 (277)
T 1deu_A 192 ATERLANYTGGIYAEYQDTTYINHVVSVAGWGIS-DGTEYWIVRNSWGEPWGERGWLRIVTSTYKDGKGARYNLAIEEHC 270 (277)
T ss_dssp CCHHHHTCCSSEECBCCSCCCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECTTHHHHTGGGTBTTTTSCE
T ss_pred cccccccCcCcEECCCCCCCcCCeEEEEEEeccc-CCccEEEEEeCCCCccCCCcEEEEEcCCCcccccccccceecccc
Confidence 888776 55578999999999997 89999999999999999999999999987 99999999
Q ss_pred eeee
Q 023507 277 SYPL 280 (281)
Q Consensus 277 ~~~~ 280 (281)
+|++
T Consensus 271 ~~~~ 274 (277)
T 1deu_A 271 TFGD 274 (277)
T ss_dssp EEEE
T ss_pred Eeec
Confidence 9875
No 39
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=100.00 E-value=3.1e-41 Score=300.71 Aligned_cols=141 Identities=28% Similarity=0.581 Sum_probs=114.2
Q ss_pred CceeccCC-CCcC--cccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhcCC-CCCCCCCCcch-hhHHHHH
Q 023507 138 TSLDWRDK-GAVT--PIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTN-GNNGCLGGSRE-KAFAYII 212 (281)
Q Consensus 138 ~~~Dwr~~-g~v~--pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~~~gC~GG~~~-~a~~~~~ 212 (281)
...|||++ |+++ ||||||.||||||||+++++|++++++++..+.||+|+|+||+.. .+.||+||... .++.|++
T Consensus 9 ~~~dWR~~~~~~~it~VkdQg~CGSCWAFaa~~alE~~~~i~~~~~~~LS~Q~lvdC~~~~~~~GC~GG~~~~~~~~~i~ 88 (265)
T 2wbf_X 9 YCNRLKDENNCISNLQVEDQGNCDTSWIFASKYHLETIRCMKGYEPTKISALYVANCYKGEHKDRCDEGSSPMEFLQIIE 88 (265)
T ss_dssp CBCGGGCTTSTGGGSCCCBCTTSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHCCSSSCCCTTTCCCCHHHHHHHHH
T ss_pred HHHhhccCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHhhcccCCCCCCCCCCHHHHHHHHH
Confidence 56799999 6877 999999999999999999999999999988999999999999874 47899998644 4456665
Q ss_pred hcCce---------------------------------------------------------------------------
Q 023507 213 QNQGI--------------------------------------------------------------------------- 217 (281)
Q Consensus 213 ~~gGi--------------------------------------------------------------------------- 217 (281)
++|||
T Consensus 89 ~~Ggi~~e~~yPY~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ik~~i~~~G 168 (265)
T 2wbf_X 89 DYGFLPAESNYPYNYVKVGEQCPKVEDHWMNLWDNGKILHNKNEPNSLDGKGYTAYESERFHDNMDAFVKIIKTEVMNKG 168 (265)
T ss_dssp HHCCCCBTTTSCCCGGGTTSCCCCCCTTCCCTTTTCEECCCCCSSSTTCCSSEEEEEGGGGTTCHHHHHHHHHHHHHHHS
T ss_pred HcCCCCCccccCCcCCCCCCCCCCccccccccccccccccccCCCceeecCCceEeeccccccchhhHHHHHHHHHHhcC
Confidence 54411
Q ss_pred -------------------ec-CccCC-CCCceEEEEEeeec--CCC--ccEEEEEcCCCCCCCCCcEEEEEcC-CCccc
Q 023507 218 -------------------FN-GVCGT-QLDHAVTIVGFGTT--EDG--ANYWLIKNSWGNTWGDAGYMKIVRD-EGLCG 271 (281)
Q Consensus 218 -------------------y~-~~~~~-~~~Hav~iVGy~~~--~~g--~~ywivkNSWG~~WG~~Gy~~i~~~-~~~Cg 271 (281)
|. ..|.. .++|||+|||||++ ++| ++|||||||||++|||+|||||+|+ .|.||
T Consensus 169 PV~v~i~~~~f~~y~~~g~~~~~~c~~~~~~HaV~iVGyG~~~~~~g~~~~YWivkNSWG~~WGe~GY~ri~~~g~n~Cg 248 (265)
T 2wbf_X 169 SVIAYIKAENVMGYEFSGKKVKNLCGDDTADHAVNIVGYGNYVNSEGEKKSYWIVRNSWGPYWGDEGYFKVDMYGPTHCH 248 (265)
T ss_dssp CEEEEECGGGGCSGGGGSSSEECCCCCSCCCEEEEEEEEEEEECTTSCEEEEEEEECSBCTTSTBTTEEEEESSCCTTCS
T ss_pred CEEEEEEcccccccccCCcEEcCCCCCCcCCEEEEEEEEeCCcccCCCcCCEEEEEcCCCCccCCCCEEEEEecCCCccC
Confidence 00 11332 46899999999985 355 5899999999999999999999974 79999
Q ss_pred cCCceee
Q 023507 272 IGTRSSY 278 (281)
Q Consensus 272 i~~~~~~ 278 (281)
|++.+.+
T Consensus 249 i~~~~~~ 255 (265)
T 2wbf_X 249 FNFIHSV 255 (265)
T ss_dssp SCSCCEE
T ss_pred cceeEEE
Confidence 6654443
No 40
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=100.00 E-value=7.9e-39 Score=288.80 Aligned_cols=169 Identities=18% Similarity=0.210 Sum_probs=121.8
Q ss_pred CceEEecccCCCCCHHHHHHHHcCCCCCCCCCCCCCCccccccCCCCCCCCCceeccCCCCcCcccCCCCcchhHHHHHH
Q 023507 87 RTYKLGTNQFSDLTNDEFRALYTGYKMPSPSHRSTTSSTFKYQNLSMTDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAV 166 (281)
Q Consensus 87 ~s~~~g~N~FsDlt~eE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~ 166 (281)
.+..-..|++.++..|.++.. +|+.++.+..+.. .+........+||++||||+++ ||||||.||||||||++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~-lG~~p~~~d~rd~---~~~~~~~~~~~lP~s~DwR~~~---pVkdQG~CGSCWAFAa~ 84 (291)
T 3ois_A 12 SGLVPRGSHMQTVLKRRKKSG-YGYIPDIADIRDF---SYTPEKSVIAALPPKVDLTPPF---QVYDQGRIGSCTANALA 84 (291)
T ss_dssp -----------CCCCCCCCTT-CCEECCCCCTTCC---BCCCCHHHHHTCCSEEECCCSS---CCCBCTTSSCHHHHHHH
T ss_pred cCcccchhhHhHhhhcccccc-CCCCCCCCccccc---ccCCCccccccCCcceecccCC---CcccCCCCccHHHHHHH
Confidence 344557889999998888765 4666655443321 1111111013799999999984 99999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCHHHHh--hhcCC--C-CCCCCCCcchhhHHHHHhcC--------------------------
Q 023507 167 AAVEGITKIRSGNLIQLSEQQLL--DCSTN--G-NNGCLGGSREKAFAYIIQNQ-------------------------- 215 (281)
Q Consensus 167 ~~le~~~~~~~~~~~~lS~q~l~--dc~~~--~-~~gC~GG~~~~a~~~~~~~g-------------------------- 215 (281)
+++|++++ ++++.+.||+|+|+ +|... . ..+|.||.+..|++|++++|
T Consensus 85 ~alE~~~~-~~g~~~~lS~q~l~~~~c~~~~~~~~~~c~GG~~~~A~~yi~~~Gi~~e~~yPY~~~~~~~~~C~~~~~~~ 163 (291)
T 3ois_A 85 AAIQFERI-HDKQSPEFIPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHKLGVCPEKEWPYGDTPADPRTEEFPPGAP 163 (291)
T ss_dssp HHHHHHHH-HTTCSSCCCBCHHHHHHHHHHHSSCTTSCCCEEHHHHHHHHHHTCCCBGGGSCCCCCCCCTTTCSCCTTCG
T ss_pred HHHHHHHH-HhCCCCCcCcCHHHHHhhhhhhhcCCCCCCCcCHHHHHHHHHHhCCCCHhhCCCCCCcccccccccccccc
Confidence 99999875 46677899999998 67632 2 34688999999999997543
Q ss_pred ----------------------------------------------------------ceecCc-cCC--CCCceEEEEE
Q 023507 216 ----------------------------------------------------------GIFNGV-CGT--QLDHAVTIVG 234 (281)
Q Consensus 216 ----------------------------------------------------------Giy~~~-~~~--~~~Hav~iVG 234 (281)
|||..+ |.. .++|||+|||
T Consensus 164 ~~~~p~~~C~~~~~~~~i~~y~~v~~~e~~i~~al~~~gPV~v~~~~~~~f~~y~~~~Gi~~~~~~~~~~~~~Hav~iVG 243 (291)
T 3ois_A 164 ASKKPSDQCYKDAQNYKITEYSRVAQDIDHLKACLAVGSPFVFGFSVYNSWVGNNSLPVRIPLPTKNDTLEGGHAVLCVG 243 (291)
T ss_dssp GGSCCCHHHHHHHGGGCCCEEEECCSCHHHHHHHHHTTCCEEEEEEEEHHHHGGGCCCSBCCCCCTTSCEEEEEEEEEEE
T ss_pred ccCCCCHHHHhhcccceeccEEEcCcCHHHHHHHHHcCCCEEEEEEeccchhhcCCCCeEEeCCCCCCCCcCCeEEEEEE
Confidence 566554 332 2589999999
Q ss_pred eeecCCCccEEEEEcCCCCCCCCCcEEEEEcC
Q 023507 235 FGTTEDGANYWLIKNSWGNTWGDAGYMKIVRD 266 (281)
Q Consensus 235 y~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~ 266 (281)
|| ++++|||||||||+.|||+|||||+|+
T Consensus 244 y~---~~~~ywivkNSWG~~WG~~Gy~~i~~~ 272 (291)
T 3ois_A 244 YD---DEIRHFRIRNSWGNNVGEDGYFWMPYE 272 (291)
T ss_dssp EE---TTTTEEEEECSBCTTSTBTTEEEEEHH
T ss_pred Ee---CCCCEEEEEeCCCCCCCCCcEEEEEHH
Confidence 98 467999999999999999999999998
No 41
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=100.00 E-value=2.1e-33 Score=264.66 Aligned_cols=80 Identities=20% Similarity=0.253 Sum_probs=59.6
Q ss_pred CCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHH-cCCCCCCCH----------------HHHhhhcCC----
Q 023507 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIR-SGNLIQLSE----------------QQLLDCSTN---- 194 (281)
Q Consensus 136 lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~-~~~~~~lS~----------------q~l~dc~~~---- 194 (281)
.|..|+++....++||+|||+||+|||||+++++|+.++++ +++.++||+ |+++||+..
T Consensus 53 ~~~~F~~~~~~~vtpVknQg~cGsCWaFs~~~~lE~~~~~~~~~~~~~LSe~yl~~~dklEkan~flq~lvdc~~~~~~~ 132 (457)
T 2e01_A 53 DNRVFNTVVSTDSTPVTNQKSSGRCWLFAATNQLRLNVLSELNLKEFELSQAYLFFYDKLEKANYFLDQIVSSADQDIDS 132 (457)
T ss_dssp CCCCCSEECC------------CCHHHHHHHHHHHHHHHHHTTCSSCCBCHHHHHHHHHHHHHHHHHHHHHHTTTSCTTS
T ss_pred CCCceEEEecCCccCcccCCCCccchhHHhHHHHHHHHHHHhCCCceeeCChhhhhhhHHHHHHHHHHHHHHhcCCcccc
Confidence 57788888888899999999999999999999999999998 778899999 788999752
Q ss_pred -------CCCCCCCCcchhhHHHHHhcC
Q 023507 195 -------GNNGCLGGSREKAFAYIIQNQ 215 (281)
Q Consensus 195 -------~~~gC~GG~~~~a~~~~~~~g 215 (281)
.+.+|+||.+..+++|++++|
T Consensus 133 r~v~~l~~~~gcdGG~~~~a~~~i~kyG 160 (457)
T 2e01_A 133 RLVQYLLAAPTEDGGQYSMFLNLVKKYG 160 (457)
T ss_dssp HHHHHHHHCTTCSCBCHHHHHHHHHHHC
T ss_pred hhhhhhccCCCCCCCCHHHHHHHHHHcC
Confidence 267999999999998887776
No 42
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A
Probab=99.98 E-value=1.2e-32 Score=259.21 Aligned_cols=81 Identities=16% Similarity=0.212 Sum_probs=70.1
Q ss_pred CCCCceeccCCCCcCcccCCCCcchhHHHHHHHHHHHHHHHH-cCCCCCCCH----------------HHHhhhcCC---
Q 023507 135 DVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIR-SGNLIQLSE----------------QQLLDCSTN--- 194 (281)
Q Consensus 135 ~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfa~~~~le~~~~~~-~~~~~~lS~----------------q~l~dc~~~--- 194 (281)
..|..|+++....++||+|||+||+|||||+++++|+.++++ +++.+.||+ |+++||+..
T Consensus 47 ~~~~~F~~~~~~~~tpVknQg~cGsCWaFs~~~~le~~~~~k~~~~~~~lSe~yl~fwDKlEkan~flq~lidc~~~~~~ 126 (453)
T 2cb5_A 47 RAQHVFQHAVPQEGKPITNQKSSGRSWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTAQRKEP 126 (453)
T ss_dssp HCCCCCSEECSCCCSSCCBCCBSSCHHHHHHHHHHHHHHHHHTTCSCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCceeeeeccCCCCcccCCCccchHhhhhHHHHHHHHHHHhcCCeEeeChHHHHHHHHHHHhhHHHHHHHHHHhccCC
Confidence 457888888888899999999999999999999999999998 578899999 999999852
Q ss_pred ----------CCCCCCCCcchhhHHHHHhcC
Q 023507 195 ----------GNNGCLGGSREKAFAYIIQNQ 215 (281)
Q Consensus 195 ----------~~~gC~GG~~~~a~~~~~~~g 215 (281)
.+.+|+||.+..+++|++++|
T Consensus 127 ~d~R~v~~l~~~~gcdGG~~~~a~~~i~kyG 157 (453)
T 2cb5_A 127 EDGRLVQFLLMNPANDGGQWDMLVNIVEKYG 157 (453)
T ss_dssp TTSHHHHHHHHCTTCSCBCHHHHHHHHHHHC
T ss_pred cchhhHHHhcCCCCCCCCChHHHHHHHHHcC
Confidence 267999999888877765444
No 43
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=99.97 E-value=7.7e-32 Score=248.89 Aligned_cols=69 Identities=22% Similarity=0.222 Sum_probs=63.7
Q ss_pred CcCcccCCCCcchhHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhcCC-----------CCCCCCCCcchhhHHHHHhcC
Q 023507 147 AVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTN-----------GNNGCLGGSREKAFAYIIQNQ 215 (281)
Q Consensus 147 ~v~pv~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-----------~~~gC~GG~~~~a~~~~~~~g 215 (281)
.++||+|||+||+|||||+++++|+.+++++++.+.||+|+|++|+.. .+.||+||.+..|++|++++|
T Consensus 21 ~vtpVknQg~cGsCWaFSa~~~lE~~~~~k~~~~~~LSeq~Lvdcd~~ekan~~l~~~g~~~gcdGG~~~~a~~~i~k~G 100 (383)
T 3pw3_A 21 PITSVKNQNRAGTCWCYSSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGMETFG 100 (383)
T ss_dssp CCCCCCBCCBSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHHHHHHHHHHHHHTTTCSCCCSCCCHHHHHHHHHHTC
T ss_pred CCCCcccCCCCcHHHHHHhHHHHHHHHHHHcCCCCccChHHHHhhchhhhhhhhhhhccCCCCCCCCCHHHHHHHHHHcC
Confidence 489999999999999999999999999999999999999999999741 257999999999999999888
No 44
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii}
Probab=99.80 E-value=2.4e-19 Score=137.06 Aligned_cols=77 Identities=38% Similarity=0.598 Sum_probs=70.1
Q ss_pred CCChhHHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEecccCCCCCHHHHHHHHcCCCCC
Q 023507 37 STHEQSVVEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKEGNRTYKLGTNQFSDLTNDEFRALYTGYKMP 114 (281)
Q Consensus 37 ~~~~~~~~~~f~~f~~~~~K~Y~s~~E~~~R~~~F~~Nl~~I~~~N~~~~~s~~~g~N~FsDlt~eE~~~~~~g~~~~ 114 (281)
+..+.++..+|++|+++|+|.|.+.+|+..|+.+|++|+++|++||++ +.+|++|+|+|+|||.+||++.++|.+++
T Consensus 15 ~~~~~~~~~~F~~wk~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~hN~~-~~sy~lglN~FaDLT~eEF~~~~lg~~~~ 91 (106)
T 3f75_P 15 EWKEAHFQDAFSSFQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQ-GYSYSLKMNHFGDLSRDEFRRKYLGFKKS 91 (106)
T ss_dssp -CCHHHHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHHHHHHHHHHTS-CCSEEECCCTTTTCCHHHHHHHSCCBCC-
T ss_pred ccCcHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhc-CCCeeeCCcccccCCHHHHHHHHcCCCCC
Confidence 456688999999999999999999889999999999999999999986 78999999999999999999999887654
No 45
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster}
Probab=99.74 E-value=3.1e-18 Score=124.92 Aligned_cols=68 Identities=32% Similarity=0.539 Sum_probs=61.1
Q ss_pred HHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHhcC---CCCceEEecccCCCCCHHHHHHHHcCCCC
Q 023507 44 VEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKE---GNRTYKLGTNQFSDLTNDEFRALYTGYKM 113 (281)
Q Consensus 44 ~~~f~~f~~~~~K~Y~s~~E~~~R~~~F~~Nl~~I~~~N~~---~~~s~~~g~N~FsDlt~eE~~~~~~g~~~ 113 (281)
+..|++|+++|+|.|.+.+|+..| .+|.+|++.|++||++ +..+|++|+|+|+|||.+|| +.++|..+
T Consensus 7 ~~~f~~~k~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlT~eEf-~~~~g~~~ 77 (80)
T 2l95_A 7 DEEWVEYKSKFDKNYEAEEDLMRR-RIYAESKARIEEHNRKFEKGEVTWKMGINHLADLTPEEF-AQRSGKKV 77 (80)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHTTGGGTSCCCCCCCCGGGTSSHHHH-HHHHTSCC
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHhccCCCCeEecCcccccCCHHHH-HHHhCCCC
Confidence 367999999999999988889999 9999999999999985 35789999999999999999 88887654
No 46
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=97.31 E-value=0.00066 Score=55.30 Aligned_cols=100 Identities=19% Similarity=0.242 Sum_probs=68.9
Q ss_pred cCCCCcchhHHHHHHHHHHHHHHH--------HcCCCCCCCHHHHhhhcCCCCCCCCCCcchhhHHHHHhcC--------
Q 023507 152 KNQKECGCCWAFAAVAAVEGITKI--------RSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQ-------- 215 (281)
Q Consensus 152 ~dQg~cgsCwAfa~~~~le~~~~~--------~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~g-------- 215 (281)
..||.-+=|-+|+.+++|-..... ...-.+.+|+++|.++ |..+...++|.+..|
T Consensus 25 ETQg~~~WCa~Y~~aAilN~~~nt~~~nA~~iMr~~yPN~s~~~l~~t---------~~~~~q~Iky~~s~G~~~~~~nr 95 (183)
T 1pxv_A 25 EQQFDNSWAAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNC---------ATFPNQMIEYGKSQGRDIHYQEG 95 (183)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHTCSCCCHHHHHHHHSTTSCTTTGGGC---------CBCHHHHHHHHHHTTCCCEEEES
T ss_pred eccCcCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhhc---------CCCHHHHHHHHHHcCcChhHhcC
Confidence 458999999999999988664421 1111345677776663 335667777777666
Q ss_pred ---------------ceecCc-------cCCCCCceEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcC
Q 023507 216 ---------------GIFNGV-------CGTQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRD 266 (281)
Q Consensus 216 ---------------Giy~~~-------~~~~~~Hav~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~ 266 (281)
|||-.. -....+||++||||-.- ++.+|.++-|=|-. |++-++-+
T Consensus 96 ~ls~neV~~~i~~Nk~I~v~~~~v~e~~~~~~~gHA~av~Gya~~-~~~~~y~~WNPW~~-----~~~~~~a~ 162 (183)
T 1pxv_A 96 VPSYNQVDQLTKDNVGIMILAQSVSQNPNDPHLGHALAVVGNAKI-NDQEKLIYWNPWDT-----ELSIQDAD 162 (183)
T ss_dssp CCCHHHHHHHHHTTCCEEEEEECCCSSTTSCCCEEEEEEEEEEEE-TTEEEEEEECTTCS-----SCEEEETT
T ss_pred CCCHHHHHHHHhcCCcEEEEccccccCCCCccCceeEEEEeeeec-CCCeEEEEeCCccC-----CcEeecCC
Confidence 666432 12367899999999987 58899999888843 67766654
No 47
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1
Probab=97.18 E-value=0.0021 Score=52.15 Aligned_cols=92 Identities=20% Similarity=0.226 Sum_probs=65.3
Q ss_pred cCCCCcchhHHHHHHHHHHHHHHH--------HcCCCCCCCHHHHhhhcCCCCCCCCCCcchhhHHHHHhcC--------
Q 023507 152 KNQKECGCCWAFAAVAAVEGITKI--------RSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQ-------- 215 (281)
Q Consensus 152 ~dQg~cgsCwAfa~~~~le~~~~~--------~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~g-------- 215 (281)
..||.-+=|-+|+.+++|-..... -+.-...+|+++|..+.. .+...++|++..|
T Consensus 16 ETQg~~pWCa~Ya~aailN~~~~~~~~~A~~imr~~yPn~S~~~l~~~~~---------t~~e~iky~~s~g~~~~~~n~ 86 (174)
T 1cv8_A 16 ETQGNNGWCAGYTMSALLNATYNTNKYHAEAVMRFLHPNLQGQQFQFTGL---------TPREMIYFGQTQGRSPQLLNR 86 (174)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHTCCCCCHHHHHHHHCSSCCHHHHHHCCC---------CHHHHHHHHHHTTCCCEEESS
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCCHHHHhhcCC---------CHHHHHHHHHHcCCChhhhcC
Confidence 358899999999999998764421 112246789999986544 4556677776666
Q ss_pred ---------------ceecCc------cCCCCCceEEEEEeeecCCCccEEEEEcCCC
Q 023507 216 ---------------GIFNGV------CGTQLDHAVTIVGFGTTEDGANYWLIKNSWG 252 (281)
Q Consensus 216 ---------------Giy~~~------~~~~~~Hav~iVGy~~~~~g~~ywivkNSWG 252 (281)
||+-.. -....+||++||||-.-.+|.+|.++-|=|-
T Consensus 87 ~ls~~eV~~~~~~nk~i~i~~~~ve~~~~~~~gHAlav~Gy~~~~ng~~~y~~WNPW~ 144 (174)
T 1cv8_A 87 MTTYNEVDNLTKNNKGIAILGSRVESRNGMHAGHAMAVVGNAKLNNGQEVIIIWNPWD 144 (174)
T ss_dssp CCCHHHHHHHHHTTCCEEEEEEESSCBTTBCCEEEEEEEEEEEETTSCEEEEEECTTC
T ss_pred CCCHHHHHHHHhcCCceEEEcccccCCCCCCCceeEEEEeeeeecCCceEEEEeCCcc
Confidence 665321 1136789999999998657889999989884
No 48
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4
Probab=97.01 E-value=0.0024 Score=57.32 Aligned_cols=100 Identities=21% Similarity=0.294 Sum_probs=68.4
Q ss_pred cCCCCcchhHHHHHHHHHHHHHH--------HHcCCCCCCCHHHHhhhcCCCCCCCCCCcchhhHHHHHhcC--------
Q 023507 152 KNQKECGCCWAFAAVAAVEGITK--------IRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQ-------- 215 (281)
Q Consensus 152 ~dQg~cgsCwAfa~~~~le~~~~--------~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~g-------- 215 (281)
..||.-+=|-+|+.+++|-.... +.+.-...+|+++|.++ |..+...++|++..|
T Consensus 201 ETQg~~pWCa~Ya~aailN~~~~t~~~nA~~iMr~~yPN~S~~~l~~t---------s~~~~q~Iky~qsyG~~~~~~n~ 271 (367)
T 1x9y_A 201 EQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNC---------ATFPNQMIEYGKSQGRDIHYQEG 271 (367)
T ss_dssp CCCSSSSCHHHHHHHHHHHHHTTCSCCCHHHHHHHHCTTSCTTTGGGC---------CCCHHHHHHHHHHTTEEEEEEES
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhhc---------CCCHHHHHHHHHHhCcchhhhcC
Confidence 45899999999999998865331 11112345677777663 346778888888777
Q ss_pred ---------------ceecCc-------cCCCCCceEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEcC
Q 023507 216 ---------------GIFNGV-------CGTQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRD 266 (281)
Q Consensus 216 ---------------Giy~~~-------~~~~~~Hav~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~ 266 (281)
||+-.- -....+|||+||||... ++.+|.++-|=|-. +++-++-.
T Consensus 272 ~ls~deVk~~id~Nk~I~v~~~~v~~~~n~~~~gHAlavvGyA~~-~~~~~y~~WNPW~~-----~~~~~sa~ 338 (367)
T 1x9y_A 272 VPSYNQVDQLTKDNVGIMILAQSVSQNPNDPHLGHALAVVGNAKI-NDQEKLIYWNPWDT-----ELSIQDAD 338 (367)
T ss_dssp CCCHHHHHHHHHTTCCEEEEEEETTSCSSSCCCSEEEEEEEEEEE-TTEEEEEEECTTCS-----SCEEEETT
T ss_pred CCCHHHHHHHHhcCCcEEEEccccccCCCCccCceeEEEEecccc-CCCcEEEEecCccC-----CceeecCC
Confidence 666321 12368999999999876 58899999887743 35555543
No 49
>3bb7_A Interpain A; cysteine protease, zymogen activation, bacterial odontopatho hydrolase; 1.50A {Prevotella intermedia} PDB: 3bba_A
Probab=24.69 E-value=57 Score=28.81 Aligned_cols=35 Identities=26% Similarity=0.446 Sum_probs=25.9
Q ss_pred CCCceEEEEEeeecCCCccEEEEEcCCCCCCCCCcEEEEEc
Q 023507 225 QLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVR 265 (281)
Q Consensus 225 ~~~Hav~iVGy~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~ 265 (281)
.++||.+|=||..+ +||=+-=.||-. .+|||.+.-
T Consensus 264 ~~GHafV~DGY~~~----~~~H~NwGWgG~--~nGyy~l~~ 298 (321)
T 3bb7_A 264 DAGHAFVIDGYNKA----GLVSVNWGWNGD--VDGYYKIDL 298 (321)
T ss_dssp CCCEEEEEEEECTT----SCEEEECSSTTT--TCEEECCTT
T ss_pred CCceEEEEccccCC----CeEEEecCCCCC--CCceEeccC
Confidence 67999999999753 677776666522 489998853
No 50
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis}
Probab=22.13 E-value=49 Score=27.87 Aligned_cols=13 Identities=23% Similarity=0.657 Sum_probs=10.9
Q ss_pred CCCceEEEEEeee
Q 023507 225 QLDHAVTIVGFGT 237 (281)
Q Consensus 225 ~~~Hav~iVGy~~ 237 (281)
..+|+|+|+||+.
T Consensus 175 ~~~H~VVl~GYd~ 187 (236)
T 3erv_A 175 YNEHCVVLIGYDQ 187 (236)
T ss_dssp TTEEEEEEEEECS
T ss_pred cCCeEEEEEEEeC
Confidence 3569999999985
Done!