Query 023508
Match_columns 281
No_of_seqs 118 out of 1114
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 08:02:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023508.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023508hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oox_A Putative 2OG-Fe(II) oxy 100.0 2.6E-61 8.7E-66 435.5 24.6 254 1-268 48-308 (312)
2 1odm_A Isopenicillin N synthas 100.0 7.9E-59 2.7E-63 422.3 24.3 259 1-271 51-326 (331)
3 1gp6_A Leucoanthocyanidin diox 100.0 4.7E-59 1.6E-63 427.4 21.8 250 1-273 92-349 (356)
4 1w9y_A 1-aminocyclopropane-1-c 100.0 4.6E-58 1.6E-62 414.9 12.6 242 1-271 46-295 (319)
5 1dcs_A Deacetoxycephalosporin 100.0 2.3E-57 7.7E-62 409.3 12.0 239 1-271 44-307 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 2.5E-52 8.6E-57 371.0 19.5 227 1-269 40-277 (280)
7 2rg4_A Uncharacterized protein 93.6 1.2 4E-05 37.0 12.1 73 150-234 116-209 (216)
8 3dkq_A PKHD-type hydroxylase S 93.2 0.13 4.3E-06 43.9 5.7 77 130-231 100-194 (243)
9 2hbt_A EGL nine homolog 1; pro 91.8 1 3.5E-05 38.2 9.6 82 131-232 119-213 (247)
10 3i3q_A Alpha-ketoglutarate-dep 91.4 1.1 3.6E-05 37.2 9.0 81 130-230 106-201 (211)
11 3s57_A Alpha-ketoglutarate-dep 88.8 1 3.5E-05 37.0 6.8 85 130-230 101-201 (204)
12 2iuw_A Alkylated repair protei 88.8 1.1 3.9E-05 37.7 7.2 90 130-232 127-230 (238)
13 3tht_A Alkylated DNA repair pr 85.5 1.2 4.2E-05 39.7 5.8 93 129-234 198-315 (345)
14 3itq_A Prolyl 4-hydroxylase, a 84.4 4.2 0.00015 33.6 8.3 103 102-232 94-212 (216)
15 2jig_A Prolyl-4 hydroxylase; h 83.6 2.4 8.1E-05 35.1 6.5 47 183-233 170-218 (224)
16 2da7_A Zinc finger homeobox pr 37.0 11 0.00038 25.3 1.0 38 82-119 13-50 (71)
17 2fct_A Syringomycin biosynthes 32.6 1.7E+02 0.0057 24.7 8.2 42 183-236 219-264 (313)
18 2x4k_A 4-oxalocrotonate tautom 29.7 45 0.0015 20.5 3.0 24 95-118 18-41 (63)
19 3abf_A 4-oxalocrotonate tautom 29.5 42 0.0015 20.9 2.9 23 96-118 17-39 (64)
20 1otf_A 4-oxalocrotonate tautom 24.2 64 0.0022 19.8 3.0 23 95-117 15-37 (62)
21 2opa_A Probable tautomerase YW 24.1 66 0.0023 19.7 3.0 24 95-118 15-38 (61)
No 1
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=2.6e-61 Score=435.45 Aligned_cols=254 Identities=32% Similarity=0.574 Sum_probs=220.1
Q ss_pred CHHHHHHHHHHhcCCHHHHhhhcCC-CCCcccccccccccCCCCCCCCCccccccccccCCCCCCCCCCCCCCCCCCCCC
Q 023508 1 MEEVFSQSKRFFKMPLNEKMKVLRN-EKHRGYTPVLDELLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAP 79 (281)
Q Consensus 1 v~~~~~~~~~fF~lp~e~K~~~~~~-~~~~Gy~~~~~e~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~~wP~~ 79 (281)
++++++.+++||+||.|+|+++... ..++||.+.+.+..... ...||+|.|.++.+.+.+++. .....+|.||..
T Consensus 48 ~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~g~e~~~~~--~~~D~kE~~~~~~~~~~~~~~--~~~~~~n~wP~~ 123 (312)
T 3oox_A 48 IDAAVDSAKAFFALPVETKKQYAGVKGGARGYIPFGVETAKGA--DHYDLKEFWHMGRDLPPGHRF--RAHMADNVWPAE 123 (312)
T ss_dssp HHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEECCCCCCSTTS--CSCCCCEEEEECCCCCTTCGG--GGTSCCCCCCTT
T ss_pred HHHHHHHHHHHHCCCHHHHhhhccCCCCccccccccceecCCC--CCCCceeeeEeecCCCcCCcc--hhccCCCCCCCc
Confidence 4689999999999999999998763 45899998887765432 246999999997543332211 123457899986
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcccccCccceeeeccccCCCCCCCCCCCcccccccCCce
Q 023508 80 DCLPGWRETMERFQREALEVAKAVARIIALALDLDADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLI 159 (281)
Q Consensus 80 ~~~~~f~~~~~~~~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~~~HtD~g~l 159 (281)
. |+||+++++|++.|.+++..||++|+++||+++++|. +.+..+.+.+|++||||++.+ ..+ +|+++|||+|+|
T Consensus 124 ~--p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~--~~~~~~~~~lr~~~Ypp~~~~-~~~-~g~~~HtD~g~l 197 (312)
T 3oox_A 124 I--PAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFK--PTVQDGNSVLRLLHYPPIPKD-ATG-VRAGAHGDINTI 197 (312)
T ss_dssp S--TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTH--HHHTTCCCEEEEEEECCCSSC-CC---CEEEECCCSSE
T ss_pred C--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHH--HHhcCCcceeeeEecCCCCCC-cCC-cCccceecCceE
Confidence 4 9999999999999999999999999999999999998 777788899999999997654 233 999999999999
Q ss_pred eEEeeCCCCceeEEeCCCCCCCceEEcCCCCCeEEEEcchhhHHHhCCccccccccccCC-----CCCceeeEEeecCCC
Q 023508 160 TLLATDEVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVLGT-----GRERYSIAFFVEPSH 234 (281)
Q Consensus 160 Tll~~d~~~GLqv~~~~~~~~~~W~~v~~~p~~~vVnvGd~l~~~SnG~~~s~~HRV~~~-----~~~R~S~~~F~~P~~ 234 (281)
|||+||.++||||+.+++. |++|+|.||++||||||+|++||||+|||++|||+++ +.+|+|++||++|+.
T Consensus 198 TlL~qd~v~GLqV~~~~g~----W~~V~p~pg~~vVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~ 273 (312)
T 3oox_A 198 TLLLGAEEGGLEVLDRDGQ----WLPINPPPGCLVINIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFAS 273 (312)
T ss_dssp EEEECCTTSCEEEECTTSC----EEECCCCSSCEEEEECHHHHHHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCT
T ss_pred EEEeEcCcCceEEECCCCc----EEECCCCCCeEEEEhHHHHHHHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCC
Confidence 9999999999999976654 9999999999999999999999999999999999875 457999999999999
Q ss_pred CceeecCCCCcCCCCCCCCC-CcCHHHHHHHHHHh
Q 023508 235 DCLVECLPTCKSDKNPPKFP-PIKCETYLSQRYKD 268 (281)
Q Consensus 235 d~~i~p~~~~~~~~~~~~~~-~~~~~e~~~~~~~~ 268 (281)
|++|.|+++++++++|++|+ ++|++||+..++++
T Consensus 274 d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~ 308 (312)
T 3oox_A 274 DYEIKTLQNCVTAENPDRYPESITADEFLQQRLRE 308 (312)
T ss_dssp TCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHH
T ss_pred CcEEecCccccCCCCcccCCCCeeHHHHHHHHHHH
Confidence 99999999999999999999 99999999999874
No 2
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=7.9e-59 Score=422.29 Aligned_cols=259 Identities=20% Similarity=0.352 Sum_probs=221.2
Q ss_pred CHHHHHHHHHH-hcCCHHHHhhhcCCCCCcccccccccccCCC----CCCCCCccccccccccCCCCCCCC--CCCCCCC
Q 023508 1 MEEVFSQSKRF-FKMPLNEKMKVLRNEKHRGYTPVLDELLDPD----TQVRGDYKEGYYIGVEVPEGDPES--EKPFYGP 73 (281)
Q Consensus 1 v~~~~~~~~~f-F~lp~e~K~~~~~~~~~~Gy~~~~~e~~~~~----~~~~~d~~E~~~~~~~~~~~~~~~--~~~~~~~ 73 (281)
++++++.+++| |+||.|+|+++.. +||.+.+.+.+... .....||+|+|++..+.+.+++.. ...+..+
T Consensus 51 ~~~~~~~~~~F~F~lP~eeK~~~~~----~Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~ 126 (331)
T 1odm_A 51 VQRLSQKTKEFHMSITPEEKWDLAI----RAYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEV 126 (331)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHBC----TTTCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCC
T ss_pred HHHHHHHHHhccCCCCHHHHHhhhh----cCCCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCC
Confidence 47899999999 9999999999975 89998887654321 013469999999986533222210 1123568
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcccccCccceee--ecccc------C--CCCCC
Q 023508 74 NVWPAPDCLPGWRETMERFQREALEVAKAVARIIALALDLDADFFDKPEMLGQAIATLR--LLHYE------G--QISDP 143 (281)
Q Consensus 74 ~~wP~~~~~~~f~~~~~~~~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~lr--l~~Yp------~--~~~~~ 143 (281)
|.||....+|+|++++++|++.|.+++..||++|+++||+++++|. +.+..+.+.+| ++||| | .+..+
T Consensus 127 n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~--~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~ 204 (331)
T 1odm_A 127 NVWPDETKHPGFQDFAEQYYWDVFGLSSALLKGYALALGKEENFFA--RHFKPDDTLASVVLIRYPYLDPYPEAAIKTAA 204 (331)
T ss_dssp CCCCCTTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTG--GGCCTTTCCCEEEEEEECCCSSCCGGGCEECT
T ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH--HHhcCcHHHHHHHHhhCCCcccccccccCCCc
Confidence 9999863359999999999999999999999999999999999998 77888889999 99999 6 22222
Q ss_pred CCCCCcccccccCCceeEEeeCCCCceeEEeCCCCCCCceEEcCCCCCeEEEEcchhhHHHhCCccccccccccCCCCCc
Q 023508 144 SKGMYGAGAHSDYGLITLLATDEVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVLGTGRER 223 (281)
Q Consensus 144 ~~~~~~~~~HtD~g~lTll~~d~~~GLqv~~~~~~~~~~W~~v~~~p~~~vVnvGd~l~~~SnG~~~s~~HRV~~~~~~R 223 (281)
....+|+++|||+|+||||+||.++||||+++++ |++|+|.||++||||||+||+||||+|||+.|||++++.+|
T Consensus 205 ~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~~g-----Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~R 279 (331)
T 1odm_A 205 DGTKLSFEWHEDVSLITVLYQSNVQNLQVETAAG-----YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWVNAER 279 (331)
T ss_dssp TSCEEEEEEECCSSSEEEEEECSSCCEEEEETTE-----EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEECCCSCE
T ss_pred cccccccccccCCCeEEEEeeCCCCCEEEEcCCC-----eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCCCCCCE
Confidence 2237899999999999999999999999998655 99999999999999999999999999999999999888899
Q ss_pred eeeEEeecCCCCceeecCCCCcCCCCCCCCCCcCHHHHHHHHHHhhhh
Q 023508 224 YSIAFFVEPSHDCLVECLPTCKSDKNPPKFPPIKCETYLSQRYKDTHA 271 (281)
Q Consensus 224 ~S~~~F~~P~~d~~i~p~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 271 (281)
+|++||+.|+.|++|.|++++++++. ++|+++|++||+..++++.+.
T Consensus 280 ~Sia~F~~P~~d~~i~pl~~~~~~~~-~~y~~~t~~e~l~~~~~~~~~ 326 (331)
T 1odm_A 280 QSLPFFVNLGYDSVIDPFDPREPNGK-SDREPLSYGDYLQNGLVSLIN 326 (331)
T ss_dssp EEEEEEECCCTTCBCCCCCTTSTTCC-CSSCCCBHHHHHHHHHHHHHH
T ss_pred EEEEEEEcCCCCCEEeCCCccccccc-cCCCCccHHHHHHHHHHHHHH
Confidence 99999999999999999999998877 899999999999999987755
No 3
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=4.7e-59 Score=427.41 Aligned_cols=250 Identities=24% Similarity=0.416 Sum_probs=218.1
Q ss_pred CHHHHHHHHHHhcCCHHHHhhhcCCC---CCcccccccccccCCCCCCCCCccccccccccCCCCCCCCCCCCCCCCCCC
Q 023508 1 MEEVFSQSKRFFKMPLNEKMKVLRNE---KHRGYTPVLDELLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWP 77 (281)
Q Consensus 1 v~~~~~~~~~fF~lp~e~K~~~~~~~---~~~Gy~~~~~e~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~~wP 77 (281)
++++++.+++||+||.|+|+++.... .++||...+.+. .....||+|.|++... +.+ ...+|.||
T Consensus 92 ~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~----~~~~~d~kE~~~~~~~-p~~-------~~~~~~wP 159 (356)
T 1gp6_A 92 MERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANN----ASGQLEWEDYFFHLAY-PEE-------KRDLSIWP 159 (356)
T ss_dssp HHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCS----TTCCCCSCEEEEEEEE-SGG-------GCCGGGSC
T ss_pred HHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccC----CCCCCChhheeeeecC-Ccc-------ccccccCC
Confidence 46899999999999999999987643 578998665432 1234799999999754 211 13568999
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCccccc---CccceeeeccccCCCCCCCCCCCcccccc
Q 023508 78 APDCLPGWRETMERFQREALEVAKAVARIIALALDLDADFFDKPEMLG---QAIATLRLLHYEGQISDPSKGMYGAGAHS 154 (281)
Q Consensus 78 ~~~~~~~f~~~~~~~~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~---~~~~~lrl~~Yp~~~~~~~~~~~~~~~Ht 154 (281)
..+ |+|++++++|++.|.+++..||++|+++||+++++|. +.+. ...+.+|++||||++. +...+|+++||
T Consensus 160 ~~~--~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~--~~~~~~~~~~~~lrl~~YPp~~~--~~~~~g~~~Ht 233 (356)
T 1gp6_A 160 KTP--SDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLE--KEVGGLEELLLQMKINYYPKCPQ--PELALGVEAHT 233 (356)
T ss_dssp CSS--TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHH--HHTTHHHHCEEEEEEEEECCCSS--TTTCCSEEEEC
T ss_pred Ccc--hhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH--HHhcccCCccceeeeeecCCCCC--cccccCcCCcc
Confidence 865 8999999999999999999999999999999999998 6666 4778999999999654 34578999999
Q ss_pred cCCceeEEeeCCCCceeEEeCCCCCCCceEEcCCCCCeEEEEcchhhHHHhCCccccccccccC-CCCCceeeEEeecCC
Q 023508 155 DYGLITLLATDEVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVLG-TGRERYSIAFFVEPS 233 (281)
Q Consensus 155 D~g~lTll~~d~~~GLqv~~~~~~~~~~W~~v~~~p~~~vVnvGd~l~~~SnG~~~s~~HRV~~-~~~~R~S~~~F~~P~ 233 (281)
|+|+||||+||.++||||+.+++ |++|+|.||++||||||+|++||||+|||++|||+. ++.+|+|++||++|+
T Consensus 234 D~g~lTlL~qd~v~GLQV~~~g~-----Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~ 308 (356)
T 1gp6_A 234 DVSALTFILHNMVPGLQLFYEGK-----WVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPP 308 (356)
T ss_dssp CCSSEEEEEECSCCCEEEEETTE-----EEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECC
T ss_pred CCCeEEEEEEcCCCCeEEecCCc-----EEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCC
Confidence 99999999999999999997544 999999999999999999999999999999999997 467999999999999
Q ss_pred CCc-eeecCCCCcCCCCCCCCCCcCHHHHHHHHHHhhhhhc
Q 023508 234 HDC-LVECLPTCKSDKNPPKFPPIKCETYLSQRYKDTHADL 273 (281)
Q Consensus 234 ~d~-~i~p~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 273 (281)
.|+ +|.|+++++++++|++|+++|++||+..++.+++...
T Consensus 309 ~d~~~i~pl~~~~~~~~p~~y~~~t~~eyl~~~~~~~~d~~ 349 (356)
T 1gp6_A 309 KDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEE 349 (356)
T ss_dssp TTTCEECCCGGGCCSSSCCSSCCEEHHHHHHHHHHHHHHHH
T ss_pred CCCcEEeCChhhcCCCCCccCCCccHHHHHHHHHHhccCcc
Confidence 999 9999999999889999999999999999998887443
No 4
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=4.6e-58 Score=414.90 Aligned_cols=242 Identities=26% Similarity=0.411 Sum_probs=206.0
Q ss_pred CHHHHHHHHHHhcCCHHHHhhhcCCCCCcccccccccccCCCCCCCCCccccccccccCCCCCCCCCCCCCCCCCCCCCC
Q 023508 1 MEEVFSQSKRFFKMPLNEKMKVLRNEKHRGYTPVLDELLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPD 80 (281)
Q Consensus 1 v~~~~~~~~~fF~lp~e~K~~~~~~~~~~Gy~~~~~e~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~~wP~~~ 80 (281)
++++++.+++||+||.|+|+++... .+||.+.+.+. ...||+|.|++... |. ..+|.||..+
T Consensus 46 ~~~~~~~~~~FF~lP~e~K~~~~~~--~~Gy~~~~~e~------~~~d~ke~~~~~~~-p~---------~~~~~wP~~~ 107 (319)
T 1w9y_A 46 MDTVEKMTKGHYKKCMEQRFKELVA--SKALEGVQAEV------TDMDWESTFFLKHL-PI---------SNISEVPDLD 107 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHTTCCCCG------GGCCCCEEEEEEEE-SC---------CGGGGCTTCC
T ss_pred HHHHHHHHHHHHcCCHHHHhhhccC--CCCCCcccccC------CCCChhhheeeecC-Cc---------ccccccccch
Confidence 4689999999999999999997543 35888665442 24699999998753 21 2358899865
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCccccc---CccceeeeccccCCCCCCCCCCCcccccccCC
Q 023508 81 CLPGWRETMERFQREALEVAKAVARIIALALDLDADFFDKPEMLG---QAIATLRLLHYEGQISDPSKGMYGAGAHSDYG 157 (281)
Q Consensus 81 ~~~~f~~~~~~~~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~---~~~~~lrl~~Yp~~~~~~~~~~~~~~~HtD~g 157 (281)
|+||+++++|++.|.+++..||++|+++||+++++|. +.+. +..+.+|++||||++. +...+|+++|||+|
T Consensus 108 --~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~--~~~~~~~~~~~~lrl~~YPp~~~--~~~~~g~~~HtD~g 181 (319)
T 1w9y_A 108 --EEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLK--NAFYGSKGPNFGTKVSNYPPCPK--PDLIKGLRAHTDAG 181 (319)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHH--HHHHTTTCCEEEEEEEECCCCSC--GGGGSSCCCBCCSS
T ss_pred --hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH--HHhcCcCCccceeEEEecCCCcc--cccccccccccCCC
Confidence 8999999999999999999999999999999999987 6665 2567899999998653 34578999999999
Q ss_pred ceeEEeeC-CCCceeEEeCCCCCCCceEEcCCCCCeEEEEcchhhHHHhCCccccccccccCC-CCCceeeEEeecCCCC
Q 023508 158 LITLLATD-EVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVLGT-GRERYSIAFFVEPSHD 235 (281)
Q Consensus 158 ~lTll~~d-~~~GLqv~~~~~~~~~~W~~v~~~p~~~vVnvGd~l~~~SnG~~~s~~HRV~~~-~~~R~S~~~F~~P~~d 235 (281)
+||||+|| .++||||+.++. |++|+|.||++||||||+||+||||+|||+.|||+.+ +.+|+|++||+.|+.|
T Consensus 182 ~lTlL~qd~~v~GLQV~~~g~-----Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~HRVv~~~~~~R~Sia~F~~p~~d 256 (319)
T 1w9y_A 182 GIILLFQDDKVSGLQLLKDGQ-----WIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSD 256 (319)
T ss_dssp SEEEEEESSSCCCEEEEETTE-----EEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSSCCEEEEEEEECCTT
T ss_pred ceEEEEecCCCCeeeEeeCCe-----EEEcccCCCcEEEEhHHHHHHHhCCeeecccceecCCCCCCceEEEEEecCCCC
Confidence 99999995 799999987554 9999999999999999999999999999999999984 6799999999999999
Q ss_pred ceeecCCCCcCCC---CCCCCCCcCHHHHHHHHHHhhhh
Q 023508 236 CLVECLPTCKSDK---NPPKFPPIKCETYLSQRYKDTHA 271 (281)
Q Consensus 236 ~~i~p~~~~~~~~---~~~~~~~~~~~e~~~~~~~~~~~ 271 (281)
++|.|++++++++ +|++|+++|++||+..++.+.+.
T Consensus 257 ~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~ 295 (319)
T 1w9y_A 257 AVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQ 295 (319)
T ss_dssp CEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCS
T ss_pred CeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcC
Confidence 9999999999887 59999999999999988876553
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=2.3e-57 Score=409.28 Aligned_cols=239 Identities=20% Similarity=0.273 Sum_probs=197.3
Q ss_pred CHHHHHHHHHHhcCC-HHHHhhhcCC--CCCccccccccccc----CCCCCCCCCccccccccccCCCCCCCCCCCCCCC
Q 023508 1 MEEVFSQSKRFFKMP-LNEKMKVLRN--EKHRGYTPVLDELL----DPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGP 73 (281)
Q Consensus 1 v~~~~~~~~~fF~lp-~e~K~~~~~~--~~~~Gy~~~~~e~~----~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~ 73 (281)
++++++++++||+|| .|+|+++... ..++||.+.+.|.+ .. ....||+|.|++.. .+
T Consensus 44 ~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~~~~~e~~~~~~~~--~~~~d~~E~~~~~~--------------~~ 107 (311)
T 1dcs_A 44 LKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTGLESESTAQITNT--GSYSDYSMCYSMGT--------------AD 107 (311)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEEEC-------------------CEEEEECS--------------SS
T ss_pred HHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCceeeccccccccccCC--CCCCCcceeeeccC--------------CC
Confidence 468999999999999 9999998765 35899998887754 22 22469999999973 25
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----CccccCCcccccCccceeeeccccCCCCCCCCC--C
Q 023508 74 NVWPAPDCLPGWRETMERFQREALEVAKAVARIIALALDL----DADFFDKPEMLGQAIATLRLLHYEGQISDPSKG--M 147 (281)
Q Consensus 74 ~~wP~~~~~~~f~~~~~~~~~~~~~l~~~ll~~l~~~Lgl----~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~--~ 147 (281)
|.|| + |+|++++++|++.|.+++..||++|+++||+ ++++|. +. .+.+|++||||++.+...+ .
T Consensus 108 n~wP--~--~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f~--~~----~~~lrl~~YPp~~~~~~~~~~~ 177 (311)
T 1dcs_A 108 NLFP--S--GDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAFL--DC----EPLLRFRYFPQVPEHRSAEEQP 177 (311)
T ss_dssp CCCS--C--HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHHH--SC----CCEEEEEEECC-----------
T ss_pred CCCC--C--hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHHh--hc----chhhheecCCCCCcccccCccc
Confidence 7899 3 8999999999999999999999999999999 777776 33 7889999999976432223 6
Q ss_pred CcccccccCCceeEEeeC-CCCc---eeEEeCCCCCCCceEEcCCCCCeEEEEcchhhHHHhCCccccccccccCC----
Q 023508 148 YGAGAHSDYGLITLLATD-EVAG---LQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVLGT---- 219 (281)
Q Consensus 148 ~~~~~HtD~g~lTll~~d-~~~G---Lqv~~~~~~~~~~W~~v~~~p~~~vVnvGd~l~~~SnG~~~s~~HRV~~~---- 219 (281)
+|+++|||+|+||||+|| .++| |||+.++. |++|+|.||++||||||+||+||||+|||+.|||+.+
T Consensus 178 ~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~-----W~~V~p~pg~lvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~ 252 (311)
T 1dcs_A 178 LRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGA-----FTDLPYRPDAVLVFCGAIATLVTGGQVKAPRHHVAAPRRDQ 252 (311)
T ss_dssp CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTE-----EEECCCCTTCEEEEECHHHHHHTTSCSCCCCEEECCC----
T ss_pred cccccccCCCeEEEEecCCCCCCceeEEEEeCCE-----EEeCcCCCCeEEEEHHHHHHHHhCCcccCCCceEeCCCccc
Confidence 789999999999999999 8999 99999433 9999999999999999999999999999999999974
Q ss_pred --CCCceeeEEeecCCCCceeecCCCCcCCCCCCCC--CCcCHHHHHHHHHHhhhh
Q 023508 220 --GRERYSIAFFVEPSHDCLVECLPTCKSDKNPPKF--PPIKCETYLSQRYKDTHA 271 (281)
Q Consensus 220 --~~~R~S~~~F~~P~~d~~i~p~~~~~~~~~~~~~--~~~~~~e~~~~~~~~~~~ 271 (281)
+.+|+|++||++|+.|++|. ++++++++.|++| +++|++||+..++++.+.
T Consensus 253 ~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~~~~~~~~ 307 (311)
T 1dcs_A 253 IAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQDWIGGNYVNIRR 307 (311)
T ss_dssp CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCSSCCCEEC
T ss_pred CCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHHHHHHHHHHHHhc
Confidence 46899999999999999999 9999888889999 999999999988776654
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=2.5e-52 Score=371.03 Aligned_cols=227 Identities=29% Similarity=0.453 Sum_probs=185.7
Q ss_pred CHHHHHHHHHHhcCCHHHHhhhcCC-CCCccccccc-ccccCCCCCCCCCccccccccccCCCCCCCCCCCCCCCCCCCC
Q 023508 1 MEEVFSQSKRFFKMPLNEKMKVLRN-EKHRGYTPVL-DELLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPA 78 (281)
Q Consensus 1 v~~~~~~~~~fF~lp~e~K~~~~~~-~~~~Gy~~~~-~e~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~~wP~ 78 (281)
++++++++++||+| |+|+++... ..++||.+.+ .|.... ....||+|.|.+. .||.
T Consensus 40 i~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY~~~~~~e~~~~--~~~~D~kE~~~~~------------------p~~~ 97 (280)
T 3on7_A 40 VERIYTEWQAFFNS--EAKNEFMFNRETHDGFFPASISETAKG--HTVKDIKEYYHVY------------------PWGR 97 (280)
T ss_dssp HHHHHHHHHHHHTS--GGGGGGBCCTTTCCEEECCC----------CCCCSCEEEEEC------------------TTSC
T ss_pred HHHHHHHHHHHhhh--HHHHHhccCCCCCCccccCccccccCC--CCcccHHHHHhcC------------------CCCC
Confidence 46899999999998 789998654 3589999876 454332 2246999998774 1555
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc--cccCCc-ccccCc-cceeeeccccCCCCCCCCCCCcccccc
Q 023508 79 PDCLPGWRETMERFQREALEVAKAVARIIALALDLDA--DFFDKP-EMLGQA-IATLRLLHYEGQISDPSKGMYGAGAHS 154 (281)
Q Consensus 79 ~~~~~~f~~~~~~~~~~~~~l~~~ll~~l~~~Lgl~~--~~~~~~-~~~~~~-~~~lrl~~Yp~~~~~~~~~~~~~~~Ht 154 (281)
.+ ++||+++++|++.|.+++..||++|+++||++. +++... +.+.++ .+.+|++||||++.++....+|+++||
T Consensus 98 ~p--~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~Ht 175 (280)
T 3on7_A 98 IP--DSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEMIANSHKTLLRILHYPPMTGDEEMGAIRAAAHE 175 (280)
T ss_dssp CC--GGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHHHTTCSSCEEEEEEECCCCTTCCCCSEEEEEEC
T ss_pred CC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHHhcCCccceEEEEECCCCCCccccCcccccCCC
Confidence 44 789999999999999999999999999999863 332200 334444 388999999997655444679999999
Q ss_pred cCCceeEEeeCCCCceeEEeCCCCCCCceEEcCCCCCeEEEEcchhhHHHhCCccccccccccCC-----CCCceeeEEe
Q 023508 155 DYGLITLLATDEVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVLGT-----GRERYSIAFF 229 (281)
Q Consensus 155 D~g~lTll~~d~~~GLqv~~~~~~~~~~W~~v~~~p~~~vVnvGd~l~~~SnG~~~s~~HRV~~~-----~~~R~S~~~F 229 (281)
|+|+||||+||.++||||+.+++. |++|+|.||++|||+||+|++||||+|||++|||+++ ..+|||++||
T Consensus 176 D~g~lTlL~qd~~~GLqV~~~~g~----W~~V~p~pg~~vVNiGD~l~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F 251 (280)
T 3on7_A 176 DINLITVLPTANEPGLQVKAKDGS----WLDVPSDFGNIIINIGDMLQEASDGYFPSTSHRVINPEGTDKTKSRISLPLF 251 (280)
T ss_dssp CCSSEEEEECCSCCCEEEECTTSC----EEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEEECCTTCCTTSCEEECCEE
T ss_pred CCCeEEEEEecCCCCeEEEcCCCC----EEECcCCCCEEEEEcChHHHHHhCCcccCCCceEeCCCCCCCCCCeEEEEEE
Confidence 999999999999999999976554 9999999999999999999999999999999999985 3589999999
Q ss_pred ecCCCCceeecCCCCcCCCCCCCCCCcCHHHHHHHHHHhh
Q 023508 230 VEPSHDCLVECLPTCKSDKNPPKFPPIKCETYLSQRYKDT 269 (281)
Q Consensus 230 ~~P~~d~~i~p~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 269 (281)
++|+.|++|+| ++|++||+.+++++.
T Consensus 252 ~~P~~d~~i~p--------------~ita~~~l~~rl~~~ 277 (280)
T 3on7_A 252 LHPHPSVVLSE--------------RYTADSYLMERLREL 277 (280)
T ss_dssp ECCCTTCBCSS--------------SCBHHHHHHHHHHHT
T ss_pred EcCCCCCEECC--------------CccHHHHHHHHHHHh
Confidence 99999999974 589999999998753
No 7
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=93.57 E-value=1.2 Score=37.05 Aligned_cols=73 Identities=21% Similarity=0.216 Sum_probs=47.8
Q ss_pred ccccccC-CceeEEee----CCCCceeEEeCCC------------C--CCCceEEcCCCCCeEEEEcchhhHHHhCCccc
Q 023508 150 AGAHSDY-GLITLLAT----DEVAGLQICKDRD------------A--KPQLWEDVAPMKGAFIVNLGDMLERWSNCIFK 210 (281)
Q Consensus 150 ~~~HtD~-g~lTll~~----d~~~GLqv~~~~~------------~--~~~~W~~v~~~p~~~vVnvGd~l~~~SnG~~~ 210 (281)
...|.+. +.|+.++. +..+.|.+.++.. . ....+..|.|.+|.+||.-+.
T Consensus 116 ~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFpS~----------- 184 (216)
T 2rg4_A 116 HGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWESW----------- 184 (216)
T ss_dssp EEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEETT-----------
T ss_pred ccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEECCC-----------
Confidence 4566665 36665552 2234577776521 0 013477899999999988653
Q ss_pred cccccccC--CCCCceeeEEeecCCC
Q 023508 211 STLHRVLG--TGRERYSIAFFVEPSH 234 (281)
Q Consensus 211 s~~HRV~~--~~~~R~S~~~F~~P~~ 234 (281)
-.|.|.. ...+|+||+|.+.+..
T Consensus 185 -l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 185 -LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp -SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred -CEEeccCCCCCCCEEEEEEEeecCC
Confidence 3799987 3469999999998764
No 8
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=93.25 E-value=0.13 Score=43.91 Aligned_cols=77 Identities=18% Similarity=0.228 Sum_probs=52.0
Q ss_pred eeeeccccCCCCCCCCCCCcccccccCC-----------ceeEEee--C----CCCceeEEeCCCCCCCceEEcCCCCCe
Q 023508 130 TLRLLHYEGQISDPSKGMYGAGAHSDYG-----------LITLLAT--D----EVAGLQICKDRDAKPQLWEDVAPMKGA 192 (281)
Q Consensus 130 ~lrl~~Yp~~~~~~~~~~~~~~~HtD~g-----------~lTll~~--d----~~~GLqv~~~~~~~~~~W~~v~~~p~~ 192 (281)
-+++++|.+- --..+|.|.. .+|+++. + ..+.+.+....+ =..|+|..|.
T Consensus 100 ~~~~~rY~~G--------~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~-----~~~V~P~~G~ 166 (243)
T 3dkq_A 100 PPLFNRYQGG--------ETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYG-----QQSIKLSAGS 166 (243)
T ss_dssp EEEEEEECTT--------CEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTE-----EEEECCCTTC
T ss_pred cceEEEECCC--------CeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCC-----cEEEecCCCE
Confidence 4778888862 1266777753 4666663 3 113465665443 4679999999
Q ss_pred EEEEcchhhHHHhCCccccccccccCC-CCCceeeEEeec
Q 023508 193 FIVNLGDMLERWSNCIFKSTLHRVLGT-GRERYSIAFFVE 231 (281)
Q Consensus 193 ~vVnvGd~l~~~SnG~~~s~~HRV~~~-~~~R~S~~~F~~ 231 (281)
+|+.-. .++|+|... ...|++++.+++
T Consensus 167 ~v~F~s------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 167 LVLYPS------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp EEEEET------------TSEEEECCEEEECEEEEEEEEE
T ss_pred EEEECC------------CCeEcCccccccCEEEEEEehh
Confidence 998743 368999873 569999998885
No 9
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=91.80 E-value=1 Score=38.23 Aligned_cols=82 Identities=20% Similarity=0.219 Sum_probs=56.0
Q ss_pred eeeccccCCCCCCCCCCCcccccccCC-----ceeEEee--CC------CCceeEEeCCCCCCCceEEcCCCCCeEEEEc
Q 023508 131 LRLLHYEGQISDPSKGMYGAGAHSDYG-----LITLLAT--DE------VAGLQICKDRDAKPQLWEDVAPMKGAFIVNL 197 (281)
Q Consensus 131 lrl~~Yp~~~~~~~~~~~~~~~HtD~g-----~lTll~~--d~------~~GLqv~~~~~~~~~~W~~v~~~p~~~vVnv 197 (281)
+.+.+|++. .-....|.|.. .+|+++. +. .+-|.++..++ .....|.|..|.+|+.-
T Consensus 119 ~~~~~Y~~~-------G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~---~~~~~v~P~~grlv~F~ 188 (247)
T 2hbt_A 119 AMVACYPGN-------GTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGK---AQFADIEPKFDRLLFFW 188 (247)
T ss_dssp EEEEEECSS-------SCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTC---SSCEEECCBTTEEEEEE
T ss_pred EEEEEecCC-------CCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCC---CceEEEEcCCCEEEEEe
Confidence 557788751 11366787763 6888874 21 23467776542 23789999999999886
Q ss_pred chhhHHHhCCccccccccccCCCCCceeeEEeecC
Q 023508 198 GDMLERWSNCIFKSTLHRVLGTGRERYSIAFFVEP 232 (281)
Q Consensus 198 Gd~l~~~SnG~~~s~~HRV~~~~~~R~S~~~F~~P 232 (281)
.+. -.+|.|......|+||+.++.-
T Consensus 189 s~~----------~~~H~V~p~~~~R~sit~W~~~ 213 (247)
T 2hbt_A 189 SDR----------RNPHEVQPAYATRYAITVWYFD 213 (247)
T ss_dssp CST----------TCCEEECCBSSCEEEEEEEEEE
T ss_pred cCC----------CceeeeccCCCEEEEEEEEEcC
Confidence 421 1689998877799999987643
No 10
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=91.38 E-value=1.1 Score=37.24 Aligned_cols=81 Identities=16% Similarity=0.146 Sum_probs=50.0
Q ss_pred eeeeccccCCCCCCCCCCCcccccccC-----C--ceeEEeeCCCCceeEEeCCCCCCCceEEcCCCCCeEEEEcchhhH
Q 023508 130 TLRLLHYEGQISDPSKGMYGAGAHSDY-----G--LITLLATDEVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLE 202 (281)
Q Consensus 130 ~lrl~~Yp~~~~~~~~~~~~~~~HtD~-----g--~lTll~~d~~~GLqv~~~~~~~~~~W~~v~~~p~~~vVnvGd~l~ 202 (281)
.+.+|+|.+ +. ++++|.|. + +++|-+... .=+.+..... ++..+.+...+|+++|.-|++=
T Consensus 106 ~~LvN~Y~~-------G~-~i~~H~D~~e~~~~~pI~svSLG~~-~~f~f~~~~~--~~~~~~i~L~~GsllvM~G~~r- 173 (211)
T 3i3q_A 106 ACLINRYAP-------GA-KLSLHQDKDEPDLRAPIVSVSLGLP-AIFQFGGLKR--NDPLKRLLLEHGDVVVWGGESR- 173 (211)
T ss_dssp EEEEEEECT-------TC-CEEEECCCCCSCTTSCEEEEEEESC-EEEEECCSST--TSCCEEEEECTTCEEEECGGGT-
T ss_pred EEEEEEEcC-------CC-CcccccCCCccccCCCEEEEECCCC-eEEEEecccC--CCceEEEECCCCCEEEECchHH-
Confidence 477889986 22 68999993 2 334433221 2233332211 1347889999999999988762
Q ss_pred HHhCCccccccccccCC--------CCCceeeEEee
Q 023508 203 RWSNCIFKSTLHRVLGT--------GRERYSIAFFV 230 (281)
Q Consensus 203 ~~SnG~~~s~~HRV~~~--------~~~R~S~~~F~ 230 (281)
.| .|.|... +..|+|+.|-.
T Consensus 174 ~~--------~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 174 LF--------YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp TC--------CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred ce--------EeccCcccCCcCCCCCCCEEEEEeee
Confidence 12 4777542 23699999975
No 11
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=88.84 E-value=1 Score=37.05 Aligned_cols=85 Identities=11% Similarity=0.117 Sum_probs=52.3
Q ss_pred eeeeccccCCCCCCCCCCCcccccccCC--------ceeEEeeCCCCceeEEeCCC-----CCCCceEEcCCCCCeEEEE
Q 023508 130 TLRLLHYEGQISDPSKGMYGAGAHSDYG--------LITLLATDEVAGLQICKDRD-----AKPQLWEDVAPMKGAFIVN 196 (281)
Q Consensus 130 ~lrl~~Yp~~~~~~~~~~~~~~~HtD~g--------~lTll~~d~~~GLqv~~~~~-----~~~~~W~~v~~~p~~~vVn 196 (281)
.+.+|+|.+ +.-++++|.|-- +++|-+... .=+.+..... ......+.+...+|+++|+
T Consensus 101 ~~LvN~Y~~-------G~d~i~~H~D~~~~~~~~~~IasvSLG~~-~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM 172 (204)
T 3s57_A 101 FVLINRYKD-------GSDHICEHRDDERELAPGSPIASVSFGAS-RDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMM 172 (204)
T ss_dssp EEEEEEESS-------TTCCEEEECCCCTTBCTTCCEEEEEEESC-EEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEE
T ss_pred eeEEEEECC-------CCCcccceecChhhccCCCcEEEEECCCc-eEEEEEEcCCCccccccCCceEEEECCCCCEEEE
Confidence 467889986 223588998862 233333221 2233433211 0112478889999999999
Q ss_pred cchhhHHHhCCccccccccccCC---CCCceeeEEee
Q 023508 197 LGDMLERWSNCIFKSTLHRVLGT---GRERYSIAFFV 230 (281)
Q Consensus 197 vGd~l~~~SnG~~~s~~HRV~~~---~~~R~S~~~F~ 230 (281)
-|++=..|. |.|... ...|+|+.|-.
T Consensus 173 ~g~~q~~w~--------H~Ip~~~~~~~~RislTFR~ 201 (204)
T 3s57_A 173 NHPTNTHWY--------HSLPVRKKVLAPRVNLTFRK 201 (204)
T ss_dssp ETTHHHHEE--------EEECCCTTCCSCEEEEEEEC
T ss_pred CchhhheeE--------eeccccCCCCCCEEEEEeee
Confidence 998877776 554432 46899999854
No 12
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=88.77 E-value=1.1 Score=37.73 Aligned_cols=90 Identities=14% Similarity=0.133 Sum_probs=55.3
Q ss_pred eeeeccccCCCCCCCCCCCcccccccCC--------ceeEEeeCCCCceeEEeCCCC------CCCceEEcCCCCCeEEE
Q 023508 130 TLRLLHYEGQISDPSKGMYGAGAHSDYG--------LITLLATDEVAGLQICKDRDA------KPQLWEDVAPMKGAFIV 195 (281)
Q Consensus 130 ~lrl~~Yp~~~~~~~~~~~~~~~HtD~g--------~lTll~~d~~~GLqv~~~~~~------~~~~W~~v~~~p~~~vV 195 (281)
.+.+|+|.+ +.-++++|.|-- ++||-+... .=+.+...... .....+.+...+|+++|
T Consensus 127 ~~LvN~Y~~-------G~d~i~~H~D~~~~~~~~~~IaslSLG~~-~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllv 198 (238)
T 2iuw_A 127 SLLCNLYRN-------EKDSVDWHSDDEPSLGRCPIIASLSFGAT-RTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLI 198 (238)
T ss_dssp EEEEEEECS-------TTCCEEEECCCCGGGCSSCCEEEEEEESC-EEEEEEECCC--------CCCEEEEEECTTCEEE
T ss_pred EEEEEEECC-------CCCceeCCcCChhhcCCCCcEEEEECCCC-EEEEEeccCCccccCcccCCceEEEEcCCCCEEE
Confidence 467899986 223688999842 333333221 12333332110 01248899999999999
Q ss_pred EcchhhHHHhCCccccccccccCCCCCceeeEEeecC
Q 023508 196 NLGDMLERWSNCIFKSTLHRVLGTGRERYSIAFFVEP 232 (281)
Q Consensus 196 nvGd~l~~~SnG~~~s~~HRV~~~~~~R~S~~~F~~P 232 (281)
+-|++=..|..|.-+.. .....|+|+.|-...
T Consensus 199 M~G~~r~~w~H~I~~~~-----~~~~~RIsLTfR~v~ 230 (238)
T 2iuw_A 199 MEGATQADWQHRVPKEY-----HSREPRVNLTFRTVY 230 (238)
T ss_dssp EEETHHHHEEEEECCCS-----SCCCCEEEEEEECCC
T ss_pred EChhhhCccEecCCCcC-----CCCCCEEEEEeeecc
Confidence 99998777765543321 135799999997743
No 13
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=85.46 E-value=1.2 Score=39.75 Aligned_cols=93 Identities=18% Similarity=0.203 Sum_probs=60.8
Q ss_pred ceeeeccccCCCCCCCCCCCcccccccCC------ceeEEeeCCCCceeEEeCCCCCCCceEEcCCCCCeEEEEcchhhH
Q 023508 129 ATLRLLHYEGQISDPSKGMYGAGAHSDYG------LITLLATDEVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLE 202 (281)
Q Consensus 129 ~~lrl~~Yp~~~~~~~~~~~~~~~HtD~g------~lTll~~d~~~GLqv~~~~~~~~~~W~~v~~~p~~~vVnvGd~l~ 202 (281)
..+.+|.|.+ +. ++++|.|.. ++||-+.. ..=+.+...++ .++.+...+|+++|+-|++=.
T Consensus 198 n~~lvN~Y~~-------G~-~I~~H~D~~~~~~~~I~slSLG~-~~~f~f~~~~~----~~~~l~L~~gsLlvM~G~~r~ 264 (345)
T 3tht_A 198 DQMTINQYEP-------GQ-GIPAHIDTHSAFEDEIVSLSLGS-EIVMDFKHPDG----IAVPVMLPRRSLLVMTGESRY 264 (345)
T ss_dssp SEEEEEEECT-------TC-CEEEECCCTTTBCSCEEEEEESS-CEEEEEECTTS----CEEEEEECTTEEEEECTHHHH
T ss_pred CEEEEEEecC-------CC-CEeeccCCchhcCCeEEEEECCC-ceeEEEccCCC----ceEEEEcCCCcEEEEChHHhh
Confidence 3577889986 11 689999974 33333321 12233433333 389999999999999999999
Q ss_pred HHhCCcccccccccc-------------------CCCCCceeeEEeecCCC
Q 023508 203 RWSNCIFKSTLHRVL-------------------GTGRERYSIAFFVEPSH 234 (281)
Q Consensus 203 ~~SnG~~~s~~HRV~-------------------~~~~~R~S~~~F~~P~~ 234 (281)
.|..|.-+-...-+- .+...|+|+.|-..+..
T Consensus 265 ~w~H~I~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~ 315 (345)
T 3tht_A 265 LWTHGITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQT 315 (345)
T ss_dssp TSEEEECCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSS
T ss_pred ceEccCCcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCC
Confidence 998776554333221 11346999999987765
No 14
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=84.36 E-value=4.2 Score=33.64 Aligned_cols=103 Identities=22% Similarity=0.203 Sum_probs=58.8
Q ss_pred HHHHHHHHhCCCCccccCCcccccCccceeeeccccCCCCCCCCCCCcccccccCC-----------ceeEEee--CC-C
Q 023508 102 AVARIIALALDLDADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYG-----------LITLLAT--DE-V 167 (281)
Q Consensus 102 ~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~~~HtD~g-----------~lTll~~--d~-~ 167 (281)
.|.+.|+..+|++....+ .+++.+|.+-. -..+|.|.. .+|+++. |. .
T Consensus 94 ~i~~Ri~~~~gl~~~~~E----------~lqv~~Y~~G~--------~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~ 155 (216)
T 3itq_A 94 KIEKRISSIMNVPASHGE----------GLHILNYEVDQ--------QYKAHYDYFAEHSRSAANNRISTLVMYLNDVEE 155 (216)
T ss_dssp HHHHHHHHHHTSCGGGBC----------CCEEEEECBTC--------CEEEECSSCCTTSGGGGGCEEEEEEEECSCCSE
T ss_pred HHHHHHHHhcCceecccc----------ceeEEEeCCCC--------ccccccCCCcCCCcccCCceEEEEEEecccCCc
Confidence 344445555677643222 47778887521 145676653 4777774 21 1
Q ss_pred CceeEEeCCCCCCCceEEcCCCCCeEEEEcchhhHHHhCCc-cccccccccCC-CCCceeeEEeecC
Q 023508 168 AGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCI-FKSTLHRVLGT-GRERYSIAFFVEP 232 (281)
Q Consensus 168 ~GLqv~~~~~~~~~~W~~v~~~p~~~vVnvGd~l~~~SnG~-~~s~~HRV~~~-~~~R~S~~~F~~P 232 (281)
+|=-+.. .. =+.|.|..|.+|+.-. ...+|. -..++|+|... ...|+++..+++-
T Consensus 156 GGeT~Fp-~~-----~~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~ 212 (216)
T 3itq_A 156 GGETFFP-KL-----NLSVHPRKGMAVYFEY----FYQDQSLNELTLHGGAPVTKGEKWIATQWVRR 212 (216)
T ss_dssp ECCEEET-TT-----TEEECCCTTCEEEEEC----CCSSHHHHHTTCEEECCEEESCEEEEEEEEES
T ss_pred CceeEec-CC-----CCEEecCCCeEEEEec----cCCCCCCCCccccccceeccccEEEEEeeEec
Confidence 2322332 22 3788999999887643 111222 14679999763 4589998887753
No 15
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=83.65 E-value=2.4 Score=35.09 Aligned_cols=47 Identities=17% Similarity=0.192 Sum_probs=33.2
Q ss_pred eEEcCCCCCeEEEEcchhhHHHhCCcc-ccccccccCC-CCCceeeEEeecCC
Q 023508 183 WEDVAPMKGAFIVNLGDMLERWSNCIF-KSTLHRVLGT-GRERYSIAFFVEPS 233 (281)
Q Consensus 183 W~~v~~~p~~~vVnvGd~l~~~SnG~~-~s~~HRV~~~-~~~R~S~~~F~~P~ 233 (281)
-+.|.|..|.+|+.-- ...+|.. ..++|+|... ...|+++..+++-.
T Consensus 170 ~~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 170 GLAVKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHVA 218 (224)
T ss_dssp SEEECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEESS
T ss_pred ceEEecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEcC
Confidence 3789999999887643 1233433 5789999763 45899998887543
No 16
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.01 E-value=11 Score=25.31 Aligned_cols=38 Identities=13% Similarity=0.207 Sum_probs=33.0
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccC
Q 023508 82 LPGWRETMERFQREALEVAKAVARIIALALDLDADFFD 119 (281)
Q Consensus 82 ~~~f~~~~~~~~~~~~~l~~~ll~~l~~~Lgl~~~~~~ 119 (281)
+.+-+.++++|+..-.+-..+-+..||+.+||+.+...
T Consensus 13 ~k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVr 50 (71)
T 2da7_A 13 YKDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVK 50 (71)
T ss_dssp STHHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHH
Confidence 45678899999999999888999999999999987654
No 17
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=32.64 E-value=1.7e+02 Score=24.70 Aligned_cols=42 Identities=19% Similarity=0.127 Sum_probs=27.3
Q ss_pred eEEcCCCCCeEEEEcchhhHHHhCCccccccccccCC----CCCceeeEEeecCCCCc
Q 023508 183 WEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVLGT----GRERYSIAFFVEPSHDC 236 (281)
Q Consensus 183 W~~v~~~p~~~vVnvGd~l~~~SnG~~~s~~HRV~~~----~~~R~S~~~F~~P~~d~ 236 (281)
|+.++..+|.+++.-| .++|+...+ ...|.++.+-+.+....
T Consensus 219 ~v~~~~~aGd~v~f~~------------~l~H~s~~N~~ss~~~R~a~~~~y~~~~~~ 264 (313)
T 2fct_A 219 AVPMQMKAGQFIIFWS------------TLMHASYPHSGESQEMRMGFASRYVPSFVH 264 (313)
T ss_dssp CEEECBCTTEEEEEET------------TSEEEECCBCSSSSSCEEEEEEEEEETTSE
T ss_pred eeEeeeCCceEEEEeC------------CceeeCCCCCCCCCCceEEEEEEEECCCce
Confidence 4555556666665533 357887653 35899999888877643
No 18
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=29.67 E-value=45 Score=20.49 Aligned_cols=24 Identities=4% Similarity=0.066 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccc
Q 023508 95 EALEVAKAVARIIALALDLDADFF 118 (281)
Q Consensus 95 ~~~~l~~~ll~~l~~~Lgl~~~~~ 118 (281)
.-.+++..|.+++++.||.+++..
T Consensus 18 ~k~~l~~~l~~~l~~~lg~p~~~v 41 (63)
T 2x4k_A 18 QLKNLVSEVTDAVEKTTGANRQAI 41 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCcccE
Confidence 446788888999999999998754
No 19
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=29.52 E-value=42 Score=20.91 Aligned_cols=23 Identities=9% Similarity=0.068 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHhCCCCcccc
Q 023508 96 ALEVAKAVARIIALALDLDADFF 118 (281)
Q Consensus 96 ~~~l~~~ll~~l~~~Lgl~~~~~ 118 (281)
-.+++..|.+++++.||.++++.
T Consensus 17 k~~l~~~lt~~l~~~lg~~~~~v 39 (64)
T 3abf_A 17 KRELVRRLTEMASRLLGEPYEEV 39 (64)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGE
T ss_pred HHHHHHHHHHHHHHHhCCCcccE
Confidence 45688888899999999998754
No 20
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=24.18 E-value=64 Score=19.80 Aligned_cols=23 Identities=17% Similarity=0.206 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCccc
Q 023508 95 EALEVAKAVARIIALALDLDADF 117 (281)
Q Consensus 95 ~~~~l~~~ll~~l~~~Lgl~~~~ 117 (281)
.-.+++..|.+++.+.||++++.
T Consensus 15 ~k~~l~~~i~~~l~~~lg~p~~~ 37 (62)
T 1otf_A 15 QKETLIRQVSEAMANSLDAPLER 37 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCccc
Confidence 44678888899999999999764
No 21
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=24.06 E-value=66 Score=19.71 Aligned_cols=24 Identities=4% Similarity=0.076 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccc
Q 023508 95 EALEVAKAVARIIALALDLDADFF 118 (281)
Q Consensus 95 ~~~~l~~~ll~~l~~~Lgl~~~~~ 118 (281)
.-.+++..|.+++.+.||++++..
T Consensus 15 qk~~l~~~i~~~l~~~lg~~~~~v 38 (61)
T 2opa_A 15 QKRNLVEKVTEAVKETTGASEEKI 38 (61)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCcCeE
Confidence 446788888999999999997643
Done!