BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023510
(281 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2
pdb|1QO4|A Chain A, Arabidopsis Thaliana Peroxidase A2 At Room Temperature
Length = 306
Score = 327 bits (838), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 162/258 (62%), Positives = 194/258 (75%), Gaps = 1/258 (0%)
Query: 5 GCDASILLDNTTTIVSEKFAAPNNNSARGFEVVDDMKAAVERACPGVVSCADILTIAAEQ 64
GCDASILLD+T +I SEK A PN NSARGF VVD++K A+E ACPGVVSC+D+L +A+E
Sbjct: 49 GCDASILLDDTGSIQSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEA 108
Query: 65 SVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALS 124
SV+L+GGPSWT LLGRRDS TAN AN ++P P SL + +F VGLN N DLVALS
Sbjct: 109 SVSLAGGPSWTVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTN-DLVALS 167
Query: 125 GAHTFGRAQCRTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDVTTPD 184
GAHTFGRA+C F++RLFNF+ TGNPDP CPQ G+ S +TNLD++TPD
Sbjct: 168 GAHTFGRARCGVFNNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTITNLDLSTPD 227
Query: 185 VFDNKYFFNLQIHKGLLQSDQELFSTPGADTAAIVNNFGRNQTAFFENFVTSMIRMGNLK 244
FDN YF NLQ + GLLQSDQELFST G+ T AIV +F NQT FF+ F SMI MGN+
Sbjct: 228 AFDNNYFANLQSNDGLLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNIS 287
Query: 245 PLTGNQGEIRLNCRRVNG 262
PLTG+ GEIRL+C++VNG
Sbjct: 288 PLTGSNGEIRLDCKKVNG 305
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase.
pdb|4A5G|B Chain B, Raphanus Sativus Anionic Peroxidase
Length = 308
Score = 322 bits (824), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 159/258 (61%), Positives = 189/258 (73%), Gaps = 1/258 (0%)
Query: 5 GCDASILLDNTTTIVSEKFAAPNNNSARGFEVVDDMKAAVERACPGVVSCADILTIAAEQ 64
GCDASILLDN+ +I+SEK A PN NSARGF VVD++K A+E ACPGVVSC D+L +A++
Sbjct: 50 GCDASILLDNSGSIISEKNAGPNANSARGFNVVDNIKTALENACPGVVSCTDVLALASQA 109
Query: 65 SVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALS 124
SV+LSGGPSWT LGRRD+ TAN+ AN ++P P L + +F VGLN N DLVALS
Sbjct: 110 SVSLSGGPSWTVDLGRRDTLTANQAGANSSIPSPTQGLSNITSKFSAVGLNTN-DLVALS 168
Query: 125 GAHTFGRAQCRTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDVTTPD 184
GAHTFGRA C FS+RLFNF+ GNPDP CPQ G GS TNLD++TPD
Sbjct: 169 GAHTFGRATCGVFSNRLFNFSGKGNPDPTLNTTLLSTLQELCPQKGRGSGSTNLDLSTPD 228
Query: 185 VFDNKYFFNLQIHKGLLQSDQELFSTPGADTAAIVNNFGRNQTAFFENFVTSMIRMGNLK 244
FDN YF NLQ + GLLQSDQELFST G+ T AIV +F NQT FF+ F SMI MGN+
Sbjct: 229 AFDNNYFTNLQSNNGLLQSDQELFSTTGSATIAIVTSFASNQTLFFQAFAQSMINMGNIS 288
Query: 245 PLTGNQGEIRLNCRRVNG 262
PLTG+ GEIRL+C++ NG
Sbjct: 289 PLTGSSGEIRLDCKKTNG 306
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly
Length = 309
Score = 309 bits (792), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 160/261 (61%), Positives = 186/261 (71%), Gaps = 1/261 (0%)
Query: 5 GCDASILLDNTTTIVSEKFAAPNNNSARGFEVVDDMKAAVERACPGVVSCADILTIAAEQ 64
GCDASILLDNTT+ +EK A N NSARGF V+D MKAAVE ACP VSCAD+LTIAA+Q
Sbjct: 49 GCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQ 108
Query: 65 SVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALS 124
SV L+GGPSW LGRRDS A LAN NLPGP +L +LKD FRNVGLN + DLVALS
Sbjct: 109 SVTLAGGPSWRVPLGRRDSLQAFLDLANANLPGPFFTLPQLKDSFRNVGLNRSSDLVALS 168
Query: 125 GAHTFGRAQCRTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDVTTPD 184
G HTFG+ QCR DRL+NF++TG PDP CP GN S L + D+ TP
Sbjct: 169 GGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPT 228
Query: 185 VFDNKYFFNLQIHKGLLQSDQELFSTPGA-DTAAIVNNFGRNQTAFFENFVTSMIRMGNL 243
+FDNKY+ NL+ KGL+QSDQELFS+P A DT +V +F + FF FV +M RMGN+
Sbjct: 229 IFDNKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNI 288
Query: 244 KPLTGNQGEIRLNCRRVNGNS 264
PLTG QG+IRLNCR VN NS
Sbjct: 289 TPLTGTQGQIRLNCRVVNSNS 309
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
pdb|1GX2|B Chain B, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
Length = 309
Score = 309 bits (791), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 159/261 (60%), Positives = 186/261 (71%), Gaps = 1/261 (0%)
Query: 5 GCDASILLDNTTTIVSEKFAAPNNNSARGFEVVDDMKAAVERACPGVVSCADILTIAAEQ 64
GCDASILLDNTT+ +EK A N NSARGF V+D MKAAVE ACP VSCAD+LTIAA+Q
Sbjct: 49 GCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQ 108
Query: 65 SVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALS 124
SV L+GGPSW LGRRDS A LAN NLP P +L +LKD FRNVGLN + DLVALS
Sbjct: 109 SVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALS 168
Query: 125 GAHTFGRAQCRTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDVTTPD 184
G HTFG+ QCR+ DRL+NF++TG PDP CP GN S L + D+ TP
Sbjct: 169 GGHTFGKNQCRSIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPT 228
Query: 185 VFDNKYFFNLQIHKGLLQSDQELFSTPGA-DTAAIVNNFGRNQTAFFENFVTSMIRMGNL 243
+FDNKY+ NL+ KGL+QSDQELFS+P A DT +V +F + FF FV +M RMGN+
Sbjct: 229 IFDNKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNI 288
Query: 244 KPLTGNQGEIRLNCRRVNGNS 264
PLTG QG+IRLNCR VN NS
Sbjct: 289 TPLTGTQGQIRLNCRVVNSNS 309
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|3ATJ|B Chain B, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|1GWT|A Chain A, Recombinant Horseradish Peroxidase C1a Phe221met
Length = 309
Score = 308 bits (789), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 159/261 (60%), Positives = 186/261 (71%), Gaps = 1/261 (0%)
Query: 5 GCDASILLDNTTTIVSEKFAAPNNNSARGFEVVDDMKAAVERACPGVVSCADILTIAAEQ 64
GCDASILLDNTT+ +EK A N NSARGF V+D MKAAVE ACP VSCAD+LTIAA+Q
Sbjct: 49 GCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQ 108
Query: 65 SVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALS 124
SV L+GGPSW LGRRDS A LAN NLP P +L +LKD FRNVGLN + DLVALS
Sbjct: 109 SVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALS 168
Query: 125 GAHTFGRAQCRTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDVTTPD 184
G HTFG+ QCR DRL+NF++TG PDP CP GN S L ++D+ TP
Sbjct: 169 GGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDMDLRTPT 228
Query: 185 VFDNKYFFNLQIHKGLLQSDQELFSTPGA-DTAAIVNNFGRNQTAFFENFVTSMIRMGNL 243
+FDNKY+ NL+ KGL+QSDQELFS+P A DT +V +F + FF FV +M RMGN+
Sbjct: 229 IFDNKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNI 288
Query: 244 KPLTGNQGEIRLNCRRVNGNS 264
PLTG QG+IRLNCR VN NS
Sbjct: 289 TPLTGTQGQIRLNCRVVNSNS 309
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate
pdb|1W4Y|A Chain A, Ferrous Horseradish Peroxidase C1a In Complex With Carbon
Monoxide
Length = 323
Score = 308 bits (789), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 159/261 (60%), Positives = 185/261 (70%), Gaps = 1/261 (0%)
Query: 5 GCDASILLDNTTTIVSEKFAAPNNNSARGFEVVDDMKAAVERACPGVVSCADILTIAAEQ 64
GCDASILLDNTT+ +EK A N NSARGF V+D MKAAVE ACP VSCAD+LTIAA+Q
Sbjct: 48 GCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQ 107
Query: 65 SVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALS 124
SV L+GGPSW LGRRDS A LAN NLP P +L +LKD FRNVGLN + DLVALS
Sbjct: 108 SVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALS 167
Query: 125 GAHTFGRAQCRTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDVTTPD 184
G HTFG+ QCR DRL+NF++TG PDP CP GN S L + D+ TP
Sbjct: 168 GGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPT 227
Query: 185 VFDNKYFFNLQIHKGLLQSDQELFSTPGA-DTAAIVNNFGRNQTAFFENFVTSMIRMGNL 243
+FDNKY+ NL+ KGL+QSDQELFS+P A DT +V +F + FF FV +M RMGN+
Sbjct: 228 IFDNKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNI 287
Query: 244 KPLTGNQGEIRLNCRRVNGNS 264
PLTG QG+IRLNCR VN NS
Sbjct: 288 TPLTGTQGQIRLNCRVVNSNS 308
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant
Horseradish Peroxidase C (hrp C)
Length = 308
Score = 307 bits (787), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 159/261 (60%), Positives = 185/261 (70%), Gaps = 1/261 (0%)
Query: 5 GCDASILLDNTTTIVSEKFAAPNNNSARGFEVVDDMKAAVERACPGVVSCADILTIAAEQ 64
GCDASILLDNTT+ +EK A N NSARGF V+D MKAAVE ACP VSCAD+LTIAA+Q
Sbjct: 48 GCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQ 107
Query: 65 SVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALS 124
SV L+GGPSW LGRRDS A LAN NLP P +L +LKD FRNVGLN + DLVALS
Sbjct: 108 SVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALS 167
Query: 125 GAHTFGRAQCRTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDVTTPD 184
G HTFG+ QCR DRL+NF++TG PDP CP GN S L + D+ TP
Sbjct: 168 GGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPT 227
Query: 185 VFDNKYFFNLQIHKGLLQSDQELFSTPGA-DTAAIVNNFGRNQTAFFENFVTSMIRMGNL 243
+FDNKY+ NL+ KGL+QSDQELFS+P A DT +V +F + FF FV +M RMGN+
Sbjct: 228 IFDNKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNI 287
Query: 244 KPLTGNQGEIRLNCRRVNGNS 264
PLTG QG+IRLNCR VN NS
Sbjct: 288 TPLTGTQGQIRLNCRVVNSNS 308
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic
Acid
pdb|7ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Complex With
Cyanide And Ferulic Acid
pdb|1H5D|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-11% Dose)
pdb|1H5E|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (11-22% Dose)
pdb|1H5F|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (22-33% Dose)
pdb|1H5G|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (33-44% Dose)
pdb|1H5I|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (56-67% Dose)
pdb|1H5J|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (67-78% Dose)
pdb|1H5K|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (78-89% Dose)
pdb|1H5M|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-100% Dose)
pdb|1H55|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Ii
pdb|1H57|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Iii
pdb|1H58|A Chain A, Structure Of Ferrous Horseradish Peroxidase C1a
pdb|1H5A|A Chain A, Structure Of Ferric Horseradish Peroxidase C1a In Complex
With Acetate
pdb|1H5C|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (100-200% Dose)
pdb|1H5H|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (44-56% Dose)
pdb|1H5L|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (89-100% Dose)
Length = 308
Score = 307 bits (786), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 159/261 (60%), Positives = 185/261 (70%), Gaps = 1/261 (0%)
Query: 5 GCDASILLDNTTTIVSEKFAAPNNNSARGFEVVDDMKAAVERACPGVVSCADILTIAAEQ 64
GCDASILLDNTT+ +EK A N NSARGF V+D MKAAVE ACP VSCAD+LTIAA+Q
Sbjct: 48 GCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQ 107
Query: 65 SVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALS 124
SV L+GGPSW LGRRDS A LAN NLP P +L +LKD FRNVGLN + DLVALS
Sbjct: 108 SVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALS 167
Query: 125 GAHTFGRAQCRTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDVTTPD 184
G HTFG+ QCR DRL+NF++TG PDP CP GN S L + D+ TP
Sbjct: 168 GGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPT 227
Query: 185 VFDNKYFFNLQIHKGLLQSDQELFSTPGA-DTAAIVNNFGRNQTAFFENFVTSMIRMGNL 243
+FDNKY+ NL+ KGL+QSDQELFS+P A DT +V +F + FF FV +M RMGN+
Sbjct: 228 IFDNKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNI 287
Query: 244 KPLTGNQGEIRLNCRRVNGNS 264
PLTG QG+IRLNCR VN NS
Sbjct: 288 TPLTGTQGQIRLNCRVVNSNS 308
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
pdb|4ATJ|B Chain B, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
Length = 309
Score = 307 bits (786), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 159/261 (60%), Positives = 185/261 (70%), Gaps = 1/261 (0%)
Query: 5 GCDASILLDNTTTIVSEKFAAPNNNSARGFEVVDDMKAAVERACPGVVSCADILTIAAEQ 64
GCDASILLDNTT+ +EK A N NSARGF V+D MKAAVE ACP VSCAD+LTIAA+Q
Sbjct: 49 GCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQ 108
Query: 65 SVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALS 124
SV L+GGPSW LGRRDS A LAN NLP P +L +LKD FRNVGLN + DLVALS
Sbjct: 109 SVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALS 168
Query: 125 GAHTFGRAQCRTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDVTTPD 184
G HTFG+ QCR DRL+NF++TG PDP CP GN S L + D+ TP
Sbjct: 169 GGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPT 228
Query: 185 VFDNKYFFNLQIHKGLLQSDQELFSTPGA-DTAAIVNNFGRNQTAFFENFVTSMIRMGNL 243
+FDNKY+ NL+ KGL+QSDQELFS+P A DT +V +F + FF FV +M RMGN+
Sbjct: 229 IFDNKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNI 288
Query: 244 KPLTGNQGEIRLNCRRVNGNS 264
PLTG QG+IRLNCR VN NS
Sbjct: 289 TPLTGTQGQIRLNCRVVNSNS 309
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln
Length = 309
Score = 306 bits (784), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 159/261 (60%), Positives = 185/261 (70%), Gaps = 1/261 (0%)
Query: 5 GCDASILLDNTTTIVSEKFAAPNNNSARGFEVVDDMKAAVERACPGVVSCADILTIAAEQ 64
GCDASILLDNTT+ +EK A N NSARGF V+D MKAAVE ACP VSCAD+LTIAA+Q
Sbjct: 49 GCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQ 108
Query: 65 SVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALS 124
SV L+GGPSW LGRRDS A LAN NLP P +L +LKD FRNVGLN + DLVALS
Sbjct: 109 SVTLAGGPSWRVPLGRRDSLQAFLDLANANLPQPFFTLPQLKDSFRNVGLNRSSDLVALS 168
Query: 125 GAHTFGRAQCRTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDVTTPD 184
G HTFG+ QCR DRL+NF++TG PDP CP GN S L + D+ TP
Sbjct: 169 GGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPT 228
Query: 185 VFDNKYFFNLQIHKGLLQSDQELFSTPGA-DTAAIVNNFGRNQTAFFENFVTSMIRMGNL 243
+FDNKY+ NL+ KGL+QSDQELFS+P A DT +V +F + FF FV +M RMGN+
Sbjct: 229 IFDNKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNI 288
Query: 244 KPLTGNQGEIRLNCRRVNGNS 264
PLTG QG+IRLNCR VN NS
Sbjct: 289 TPLTGTQGQIRLNCRVVNSNS 309
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In
Complex With Ferulic Acid
Length = 308
Score = 306 bits (783), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 158/261 (60%), Positives = 185/261 (70%), Gaps = 1/261 (0%)
Query: 5 GCDASILLDNTTTIVSEKFAAPNNNSARGFEVVDDMKAAVERACPGVVSCADILTIAAEQ 64
GCDASILLDNTT+ +EK A N NSARGF V+D MKAAVE ACP VSCAD+LTIAA+Q
Sbjct: 48 GCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQ 107
Query: 65 SVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALS 124
SV L+GGPSW LGRRDS A LAN NLP P +L +LKD FRNVGLN + DLVALS
Sbjct: 108 SVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALS 167
Query: 125 GAHTFGRAQCRTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDVTTPD 184
G H+FG+ QCR DRL+NF++TG PDP CP GN S L + D+ TP
Sbjct: 168 GGHSFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPT 227
Query: 185 VFDNKYFFNLQIHKGLLQSDQELFSTPGA-DTAAIVNNFGRNQTAFFENFVTSMIRMGNL 243
+FDNKY+ NL+ KGL+QSDQELFS+P A DT +V +F + FF FV +M RMGN+
Sbjct: 228 IFDNKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNI 287
Query: 244 KPLTGNQGEIRLNCRRVNGNS 264
PLTG QG+IRLNCR VN NS
Sbjct: 288 TPLTGTQGQIRLNCRVVNSNS 308
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
pdb|2ATJ|B Chain B, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
Length = 308
Score = 305 bits (782), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 158/260 (60%), Positives = 184/260 (70%), Gaps = 1/260 (0%)
Query: 5 GCDASILLDNTTTIVSEKFAAPNNNSARGFEVVDDMKAAVERACPGVVSCADILTIAAEQ 64
GCDASILLDNTT+ +EK A N NSARGF V+D MKAAVE ACP VSCAD+LTIAA+Q
Sbjct: 49 GCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQ 108
Query: 65 SVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALS 124
SV L+GGPSW LGRRDS A LAN NLP P +L +LKD FRNVGLN + DLVALS
Sbjct: 109 SVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALS 168
Query: 125 GAHTFGRAQCRTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDVTTPD 184
G HTFG+ QCR DRL+NF++TG PDP CP GN S L + D+ TP
Sbjct: 169 GGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPT 228
Query: 185 VFDNKYFFNLQIHKGLLQSDQELFSTPGA-DTAAIVNNFGRNQTAFFENFVTSMIRMGNL 243
+FDNKY+ NL+ KGL+QSDQELFS+P A DT +V +F + FF FV +M RMGN+
Sbjct: 229 IFDNKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNI 288
Query: 244 KPLTGNQGEIRLNCRRVNGN 263
PLTG QG+IRLNCR VN N
Sbjct: 289 TPLTGTQGQIRLNCRVVNSN 308
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|B Chain B, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|C Chain C, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|D Chain D, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|E Chain E, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|F Chain F, Recombinant Horseradish Peroxidase C1a
pdb|1HCH|A Chain A, Structure Of Horseradish Peroxidase C1a Compound I
Length = 306
Score = 304 bits (778), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 157/258 (60%), Positives = 183/258 (70%), Gaps = 1/258 (0%)
Query: 5 GCDASILLDNTTTIVSEKFAAPNNNSARGFEVVDDMKAAVERACPGVVSCADILTIAAEQ 64
GCDASILLDNTT+ +EK A N NSARGF V+D MKAAVE ACP VSCAD+LTIAA+Q
Sbjct: 48 GCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQ 107
Query: 65 SVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALS 124
SV L+GGPSW LGRRDS A LAN NLP P +L +LKD FRNVGLN + DLVALS
Sbjct: 108 SVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALS 167
Query: 125 GAHTFGRAQCRTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDVTTPD 184
G HTFG+ QCR DRL+NF++TG PDP CP GN S L + D+ TP
Sbjct: 168 GGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPT 227
Query: 185 VFDNKYFFNLQIHKGLLQSDQELFSTPGA-DTAAIVNNFGRNQTAFFENFVTSMIRMGNL 243
+FDNKY+ NL+ KGL+QSDQELFS+P A DT +V +F + FF FV +M RMGN+
Sbjct: 228 IFDNKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNI 287
Query: 244 KPLTGNQGEIRLNCRRVN 261
PLTG QG+IRLNCR VN
Sbjct: 288 TPLTGTQGQIRLNCRVVN 305
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y
Length = 306
Score = 302 bits (773), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 156/258 (60%), Positives = 182/258 (70%), Gaps = 1/258 (0%)
Query: 5 GCDASILLDNTTTIVSEKFAAPNNNSARGFEVVDDMKAAVERACPGVVSCADILTIAAEQ 64
GCDASILLDNTT+ +EK A N NSARGF V+D MKAAVE ACP VSCAD+LTIAA+Q
Sbjct: 48 GCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQ 107
Query: 65 SVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALS 124
SV L+GGPSW LGRRDS A LAN NLP P +L +LKD FRNVGLN + DLVAL
Sbjct: 108 SVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALY 167
Query: 125 GAHTFGRAQCRTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDVTTPD 184
G HTFG+ QCR DRL+NF++TG PDP CP GN S L + D+ TP
Sbjct: 168 GGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPT 227
Query: 185 VFDNKYFFNLQIHKGLLQSDQELFSTPGA-DTAAIVNNFGRNQTAFFENFVTSMIRMGNL 243
+FDNKY+ NL+ KGL+QSDQELFS+P A DT +V +F + FF FV +M RMGN+
Sbjct: 228 IFDNKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNI 287
Query: 244 KPLTGNQGEIRLNCRRVN 261
PLTG QG+IRLNCR VN
Sbjct: 288 TPLTGTQGQIRLNCRVVN 305
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase
pdb|1FHF|B Chain B, The Structure Of Soybean Peroxidase
pdb|1FHF|C Chain C, The Structure Of Soybean Peroxidase
Length = 304
Score = 290 bits (742), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 158/259 (61%), Positives = 183/259 (70%), Gaps = 1/259 (0%)
Query: 4 QGCDASILLDNTTTIVSEKFAAPNNNSARGFEVVDDMKAAVERACPGVVSCADILTIAAE 63
QGCD S+LL+NT TI SE+ A PN NS RG +VV+D+K AVE +CP VSCADIL IAAE
Sbjct: 47 QGCDGSVLLNNTDTIESEQDALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAE 106
Query: 64 QSVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVAL 123
+ L GGP W LGRRDS TANRTLAN+NLP P +L +LK F GLN DLV L
Sbjct: 107 IASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLN-TLDLVTL 165
Query: 124 SGAHTFGRAQCRTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDVTTP 183
SG HTFGRA+C TF +RL+NF++TGNPDP CPQ G LTNLD++TP
Sbjct: 166 SGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTP 225
Query: 184 DVFDNKYFFNLQIHKGLLQSDQELFSTPGADTAAIVNNFGRNQTAFFENFVTSMIRMGNL 243
D FDN+Y+ NL GLLQSDQELFSTPGADT IVN+F NQ FF NF SMI+MGN+
Sbjct: 226 DQFDNRYYSNLLQLNGLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNI 285
Query: 244 KPLTGNQGEIRLNCRRVNG 262
LTG++GEIRL C VNG
Sbjct: 286 GVLTGDEGEIRLQCNFVNG 304
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N
pdb|1QGJ|B Chain B, Arabidopsis Thaliana Peroxidase N
Length = 300
Score = 253 bits (646), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 140/259 (54%), Positives = 166/259 (64%), Gaps = 9/259 (3%)
Query: 5 GCDASILLDNTTTIVSEKFAAPNNNSARGFEVVDDMKAAVERACPGVVSCADILTIAAEQ 64
GCDAS+LLD SEK A PN NSARGFEV+D +KAAVE ACPGVVSCADILT+AA
Sbjct: 48 GCDASLLLDGAD---SEKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARD 104
Query: 65 SVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALS 124
SV LSGGP W LGR+D AN+ AN NLP P L+ + +F V LN D+VALS
Sbjct: 105 SVVLSGGPGWRVALGRKDGLVANQNSAN-NLPSPFEPLDAIIAKFVAVNLNIT-DVVALS 162
Query: 125 GAHTFGRAQCRTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDVTTPD 184
GAHTFG+A+C FS+RLFNF GNPD CP GGN ++ LD +T D
Sbjct: 163 GAHTFGQAKCAVFSNRLFNFTGAGNPDATLETSLLSNLQTVCPLGGNSNITAPLDRSTTD 222
Query: 185 VFDNKYFFNLQIHKGLLQSDQELFSTPGA--DTAAIVNNFGRNQTAFFENFVTSMIRMGN 242
FDN YF NL KGLL SDQ LFS+ A T +V + R+Q+ FF +F +MIRMGN
Sbjct: 223 TFDNNYFKNLLEGKGLLSSDQILFSSDLAVNTTKKLVEAYSRSQSLFFRDFTCAMIRMGN 282
Query: 243 LKPLTGNQGEIRLNCRRVN 261
+ G GE+R NCR +N
Sbjct: 283 IS--NGASGEVRTNCRVIN 299
>pdb|1SCH|A Chain A, Peanut Peroxidase
pdb|1SCH|B Chain B, Peanut Peroxidase
Length = 294
Score = 238 bits (607), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 129/258 (50%), Positives = 158/258 (61%), Gaps = 10/258 (3%)
Query: 4 QGCDASILLDNTTTIVSEKFAAPNNNSARGFEVVDDMKAAVERACPGVVSCADILTIAAE 63
QGCDAS+LLD+T+ EK A PN NS RGFEV+D +K+ VE CPGVVSCADIL +AA
Sbjct: 47 QGCDASVLLDDTSNFTGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAAR 106
Query: 64 QSVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVAL 123
SV GG SW LLGRRDS TA+ + AN +LP P +L L F N G +LV L
Sbjct: 107 DSVVALGGASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTK-ELVTL 165
Query: 124 SGAHTFGRAQCRTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDVTTP 183
SGAHT G+AQC F R++N N DP CP G + L+ DVTTP
Sbjct: 166 SGAHTIGQAQCTAFRTRIYN---ESNIDP----TYAKSLQANCPSVGGDTNLSPFDVTTP 218
Query: 184 DVFDNKYFFNLQIHKGLLQSDQELFSTPGADTAAIVNNFGRNQTAFFENFVTSMIRMGNL 243
+ FDN Y+ NL+ KGLL SDQ+LF+ G T + V + N F +F +MI+MGNL
Sbjct: 219 NKFDNAYYINLRNKKGLLHSDQQLFN--GVSTDSQVTAYSNNAATFNTDFGNAMIKMGNL 276
Query: 244 KPLTGNQGEIRLNCRRVN 261
PLTG G+IR NCR+ N
Sbjct: 277 SPLTGTSGQIRTNCRKTN 294
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From
Royal Palm Tree
Length = 304
Score = 196 bits (499), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 110/260 (42%), Positives = 148/260 (56%), Gaps = 5/260 (1%)
Query: 4 QGCDASILLDNTTTIVSEKFAAPNNNSARGFEVVDDMKAAVERACPGVVSCADILTIAAE 63
+GCDAS+LLD+T +EK A PNN S RGFEV+ K+AVE ACP VSCADIL AA
Sbjct: 47 RGCDASVLLDSTANNTAEKDAIPNNPSLRGFEVITAAKSAVEAACPQTVSCADILAFAAR 106
Query: 64 QSVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVAL 123
S L+G ++ GRRD + + AN +P P + +L + F N L + ++V L
Sbjct: 107 DSANLAGNITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTAD-EMVTL 165
Query: 124 SGAHTFGRAQCRTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQGGN--GSVLTNLDVT 181
SGAH+ G A C +F++RL+NFNS DP CP + +LD+
Sbjct: 166 SGAHSIGVAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDII 225
Query: 182 TPDVFDNKYFFNLQIHKGLLQSDQELFSTPGADTAAIVNNFGRNQTAFFENFVTSMIRMG 241
TP V DN Y+ +Q+ GLL SDQ L + A+ +A V N TA+ F +M++MG
Sbjct: 226 TPSVLDNMYYTGVQLTLGLLTSDQALVTE--ANLSAAVKANAMNLTAWASKFAQAMVKMG 283
Query: 242 NLKPLTGNQGEIRLNCRRVN 261
++ LTG QGEIR NC VN
Sbjct: 284 QIEVLTGTQGEIRTNCSVVN 303
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1
Length = 309
Score = 180 bits (456), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 111/259 (42%), Positives = 147/259 (56%), Gaps = 12/259 (4%)
Query: 2 LFQGCDASILLDNTTTIVSEKFAAPNNN-SARGFEVVDDMKAAVERACPG-VVSCADILT 59
QGCDAS+LLD + T E+ A PN F+ V+D++ +ER C G VVSC+DIL
Sbjct: 52 FVQGCDASVLLDGSATGPGEQQAPPNLTLRPSAFKAVNDIRDRLERECRGAVVSCSDILA 111
Query: 60 IAAEQSVALSGGPSWTNLLGRRDSRT-ANRTLANENLPGPNNSLERLKDRFRNVGLNDNF 118
+AA SV +SGGP + LGRRDSR+ A+ +LPGP+++++ L D
Sbjct: 112 LAARDSVVVSGGPDYRVPLGRRDSRSFASTQDVLSDLPGPSSNVQSLLAL-LGRLGLDAT 170
Query: 119 DLVALSGAHTFGRAQCRTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNL 178
DLV +SG HT G A C +F DRLF PDP CP G T L
Sbjct: 171 DLVTISGGHTIGLAHCSSFEDRLFP-----RPDPTISPTFLSRLKRTCPAKGTDR-RTVL 224
Query: 179 DVTTPDVFDNKYFFNLQIHKGLLQSDQELFSTPGADTAAIVNNFGRNQTAFFENFVTSMI 238
DV TP+VFDNKY+ +L +GL SDQ+LF+ A T IV F ++Q FFE F S+
Sbjct: 225 DVRTPNVFDNKYYIDLVNREGLFVSDQDLFTN--AITRPIVERFAQSQQDFFEQFGVSIG 282
Query: 239 RMGNLKPLTGNQGEIRLNC 257
+MG ++ T +QGE+R NC
Sbjct: 283 KMGQMRVRTSDQGEVRRNC 301
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase
From Tobacco Plants And Structural Insights For Its
Instability
Length = 295
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 29/198 (14%)
Query: 52 VSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANENLP--GPNNSLERLKDRF 109
V+ AD+ +A+ ++ +GGP GR D + LP GP + + L+D F
Sbjct: 87 VTYADLFQLASATAIEEAGGPKIPMKYGRVDVTEPEQCPEEGRLPDAGPPSPAQHLRDVF 146
Query: 110 RNVGLNDNFDLVALSGAHTFGRAQCRTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQG 169
+GLND ++VALSGAHT GR++ DR + G P+ P
Sbjct: 147 YRMGLNDK-EIVALSGAHTLGRSR----PDR----SGWGKPE--------TKYTKDGPGA 189
Query: 170 GNGSVLTNLDVTTPDVFDNKYFFNLQIHKG----LLQSDQELFSTPGADTAAIVNNFGRN 225
G T + FDN YF +++ + +L +D LF P A + +
Sbjct: 190 PGGQSWTAQWLK----FDNSYFKDIKERRDEDLLVLPTDAALFEDPSFKVYA--EKYAAD 243
Query: 226 QTAFFENFVTSMIRMGNL 243
AFF+++ + ++ NL
Sbjct: 244 PEAFFKDYAEAHAKLSNL 261
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant
Length = 261
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 78/198 (39%), Gaps = 47/198 (23%)
Query: 51 VVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRF- 109
++S AD +A +V ++GGP GR D LP + L+D F
Sbjct: 101 ILSYADFYQLAGVVAVEVTGGPEVPFHPGREDK---PEPPPEGRLPDATKGSDHLRDVFG 157
Query: 110 RNVGLNDNFDLVALSGAHTFGRAQCRTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQG 169
+ +GL D D+VALSG HT G A G
Sbjct: 158 KAMGLTDQ-DIVALSGGHTIGAAHKEA-------------------------------SG 185
Query: 170 GNGSVLTNLDVTTPDVFDNKYFFNLQI--HKGLLQ--SDQELFSTPGADTAAIVNNFGRN 225
G +N P +FDN YF L +GLLQ SD+ L S P +V+ + +
Sbjct: 186 FEGPWTSN-----PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDP--VFRPLVDKYAAD 238
Query: 226 QTAFFENFVTSMIRMGNL 243
+ AFF ++ + ++ L
Sbjct: 239 EDAFFADYAEAHQKLSEL 256
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant
Length = 261
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 78/198 (39%), Gaps = 47/198 (23%)
Query: 51 VVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRF- 109
++S AD +A +V ++GGP GR D LP + L+D F
Sbjct: 101 ILSYADFYQLAGVVAVEVTGGPEVPFHPGREDK---PEPPPEGRLPDATKGSDHLRDVFG 157
Query: 110 RNVGLNDNFDLVALSGAHTFGRAQCRTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQG 169
+ +GL D D+VALSG HT G A G
Sbjct: 158 KAMGLTDQ-DIVALSGGHTIGAAHKER-------------------------------SG 185
Query: 170 GNGSVLTNLDVTTPDVFDNKYFFNLQI--HKGLLQ--SDQELFSTPGADTAAIVNNFGRN 225
G +N P +FDN YF L +GLLQ SD+ L S P +V+ + +
Sbjct: 186 FEGPWTSN-----PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDP--VFRPLVDKYAAD 238
Query: 226 QTAFFENFVTSMIRMGNL 243
+ AFF ++ + ++ L
Sbjct: 239 EDAFFADYAEAHQKLSEL 256
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHC|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHD|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHE|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2VCN|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant W41a
pdb|2VNX|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a After Exposure To A High Dose Of X-Rays
pdb|2VNZ|X Chain X, Crystal Structure Of Dithinonite Reduced Soybean Ascorbate
Peroxidase Mutant W41a.
pdb|2VO2|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a Subjected To Low Dose X-Rays
pdb|2WD4|A Chain A, Ascorbate Peroxidase As A Heme Oxygenase: W41a Variant
Product With T-Butyl Peroxide
Length = 261
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 78/198 (39%), Gaps = 47/198 (23%)
Query: 51 VVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRF- 109
++S AD +A +V ++GGP GR D LP + L+D F
Sbjct: 101 ILSYADFYQLAGVVAVEVTGGPEVPFHPGREDK---PEPPPEGRLPDATKGSDHLRDVFG 157
Query: 110 RNVGLNDNFDLVALSGAHTFGRAQCRTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQG 169
+ +GL D D+VALSG HT G A G
Sbjct: 158 KAMGLTDQ-DIVALSGGHTIGAAHKER-------------------------------SG 185
Query: 170 GNGSVLTNLDVTTPDVFDNKYFFNLQI--HKGLLQ--SDQELFSTPGADTAAIVNNFGRN 225
G +N P +FDN YF L +GLLQ SD+ L S P +V+ + +
Sbjct: 186 FEGPWTSN-----PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDP--VFRPLVDKYAAD 238
Query: 226 QTAFFENFVTSMIRMGNL 243
+ AFF ++ + ++ L
Sbjct: 239 EDAFFADYAEAHQKLSEL 256
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant
Length = 249
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 78/198 (39%), Gaps = 47/198 (23%)
Query: 51 VVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRF- 109
++S AD +A +V ++GGP GR D LP + L+D F
Sbjct: 89 ILSYADFYQLAGVVAVEVTGGPEVPFHPGREDK---PEPPPEGRLPDATKGSDHLRDVFG 145
Query: 110 RNVGLNDNFDLVALSGAHTFGRAQCRTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQG 169
+ +GL D D+VALSG HT G A G
Sbjct: 146 KAMGLTDQ-DIVALSGGHTIGAAHKER-------------------------------SG 173
Query: 170 GNGSVLTNLDVTTPDVFDNKYFFNLQI--HKGLLQ--SDQELFSTPGADTAAIVNNFGRN 225
G +N P +FDN YF L +GLLQ SD+ L S P +V+ + +
Sbjct: 174 FEGPWTSN-----PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDP--VFRPLVDKYAAD 226
Query: 226 QTAFFENFVTSMIRMGNL 243
+ AFF ++ + ++ L
Sbjct: 227 EDAFFADYAEAHQKLSEL 244
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant
Length = 261
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 78/198 (39%), Gaps = 47/198 (23%)
Query: 51 VVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRF- 109
++S AD +A +V ++GGP GR D LP + L+D F
Sbjct: 101 ILSYADFYQLAGVVAVEVTGGPEVPFHPGREDK---PEPPPEGRLPDATKGSDHLRDVFG 157
Query: 110 RNVGLNDNFDLVALSGAHTFGRAQCRTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQG 169
+ +GL D D+VALSG HT G A G
Sbjct: 158 KAMGLTDQ-DIVALSGGHTIGAAHKER-------------------------------SG 185
Query: 170 GNGSVLTNLDVTTPDVFDNKYFFNLQI--HKGLLQ--SDQELFSTPGADTAAIVNNFGRN 225
G +N P +FDN YF L +GLLQ SD+ L S P +V+ + +
Sbjct: 186 FEGPWTSN-----PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDP--VFRPLVDKYAAD 238
Query: 226 QTAFFENFVTSMIRMGNL 243
+ AFF ++ + ++ L
Sbjct: 239 EDAFFADYAEAHQKLSEL 256
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With
Ascorbate
pdb|1OAG|A Chain A, Ascorbate Peroxidase From Soybean Cytosol
pdb|1V0H|X Chain X, Ascobate Peroxidase From Soybean Cytosol In Complex With
Salicylhydroxamic Acid
pdb|2GHH|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHK|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
Length = 261
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 78/198 (39%), Gaps = 47/198 (23%)
Query: 51 VVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRF- 109
++S AD +A +V ++GGP GR D LP + L+D F
Sbjct: 101 ILSYADFYQLAGVVAVEVTGGPEVPFHPGREDK---PEPPPEGRLPDATKGSDHLRDVFG 157
Query: 110 RNVGLNDNFDLVALSGAHTFGRAQCRTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQG 169
+ +GL D D+VALSG HT G A G
Sbjct: 158 KAMGLTDQ-DIVALSGGHTIGAAHKER-------------------------------SG 185
Query: 170 GNGSVLTNLDVTTPDVFDNKYFFNLQI--HKGLLQ--SDQELFSTPGADTAAIVNNFGRN 225
G +N P +FDN YF L +GLLQ SD+ L S P +V+ + +
Sbjct: 186 FEGPWTSN-----PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDP--VFRPLVDKYAAD 238
Query: 226 QTAFFENFVTSMIRMGNL 243
+ AFF ++ + ++ L
Sbjct: 239 EDAFFADYAEAHQKLSEL 256
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii
pdb|2XIH|A Chain A, The Structure Of Ascorbate Peroxidase Compound Iii
pdb|2XI6|A Chain A, The Structure Of Ascorbate Peroxidase Compound I
pdb|2XJ6|A Chain A, The Structure Of Ferrous Ascorbate Peroxidase
Length = 249
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 78/198 (39%), Gaps = 47/198 (23%)
Query: 51 VVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRF- 109
++S AD +A +V ++GGP GR D LP + L+D F
Sbjct: 89 ILSYADFYQLAGVVAVEVTGGPEVPFHPGREDK---PEPPPEGRLPDATKGSDHLRDVFG 145
Query: 110 RNVGLNDNFDLVALSGAHTFGRAQCRTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQG 169
+ +GL D D+VALSG HT G A G
Sbjct: 146 KAMGLTDQ-DIVALSGGHTIGAAHKER-------------------------------SG 173
Query: 170 GNGSVLTNLDVTTPDVFDNKYFFNLQI--HKGLLQ--SDQELFSTPGADTAAIVNNFGRN 225
G +N P +FDN YF L +GLLQ SD+ L S P +V+ + +
Sbjct: 174 FEGPWTSN-----PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDP--VFRPLVDKYAAD 226
Query: 226 QTAFFENFVTSMIRMGNL 243
+ AFF ++ + ++ L
Sbjct: 227 EDAFFADYAEAHQKLSEL 244
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant H42a
Length = 261
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 78/198 (39%), Gaps = 47/198 (23%)
Query: 51 VVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRF- 109
++S AD +A +V ++GGP GR D LP + L+D F
Sbjct: 101 ILSYADFYQLAGVVAVEVTGGPEVPFHPGREDK---PEPPPEGRLPDATKGSDHLRDVFG 157
Query: 110 RNVGLNDNFDLVALSGAHTFGRAQCRTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQG 169
+ +GL D D+VALSG HT G A G
Sbjct: 158 KAMGLTDQ-DIVALSGGHTIGAAHKER-------------------------------SG 185
Query: 170 GNGSVLTNLDVTTPDVFDNKYFFNLQI--HKGLLQ--SDQELFSTPGADTAAIVNNFGRN 225
G +N P +FDN YF L +GLLQ SD+ L S P +V+ + +
Sbjct: 186 FEGPWTSN-----PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDP--VFRPLVDKYAAD 238
Query: 226 QTAFFENFVTSMIRMGNL 243
+ AFF ++ + ++ L
Sbjct: 239 EDAFFADYAEAHQKLSEL 256
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant
Length = 249
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 78/198 (39%), Gaps = 47/198 (23%)
Query: 51 VVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRF- 109
++S AD +A +V ++GGP GR D LP + L+D F
Sbjct: 89 ILSYADFYQLAGVVAVEVTGGPEVPFHPGREDK---PEPPPEGRLPDATKGSDHLRDVFG 145
Query: 110 RNVGLNDNFDLVALSGAHTFGRAQCRTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQG 169
+ +GL D D+VALSG HT G A G
Sbjct: 146 KAMGLTDQ-DIVALSGGHTIGAAHKER-------------------------------SG 173
Query: 170 GNGSVLTNLDVTTPDVFDNKYFFNLQI--HKGLLQ--SDQELFSTPGADTAAIVNNFGRN 225
G +N P +FDN YF L +GLLQ SD+ L S P +V+ + +
Sbjct: 174 FEGPWTSN-----PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDP--VFRPLVDKYAAD 226
Query: 226 QTAFFENFVTSMIRMGNL 243
+ AFF ++ + ++ L
Sbjct: 227 EDAFFADYAEAHQKLSEL 244
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant
Length = 249
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 78/198 (39%), Gaps = 47/198 (23%)
Query: 51 VVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRF- 109
++S AD +A +V ++GGP GR D LP + L+D F
Sbjct: 89 ILSYADFYQLAGVVAVEVTGGPEVPFHPGREDK---PEPPPEGRLPDATKGSDHLRDVFG 145
Query: 110 RNVGLNDNFDLVALSGAHTFGRAQCRTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQG 169
+ +GL D D+VALSG HT G A G
Sbjct: 146 KAMGLTDQ-DIVALSGGHTIGAAHKER-------------------------------SG 173
Query: 170 GNGSVLTNLDVTTPDVFDNKYFFNLQI--HKGLLQ--SDQELFSTPGADTAAIVNNFGRN 225
G +N P +FDN YF L +GLLQ SD+ L S P +V+ + +
Sbjct: 174 FEGPWTSN-----PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDP--VFRPLVDKYAAD 226
Query: 226 QTAFFENFVTSMIRMGNL 243
+ AFF ++ + ++ L
Sbjct: 227 EDAFFADYAEAHQKLSEL 244
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase
Length = 264
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 78/198 (39%), Gaps = 47/198 (23%)
Query: 51 VVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRF- 109
++S AD +A +V ++GGP GR D LP + L+D F
Sbjct: 101 ILSYADFYQLAGVVAVEVTGGPEVPFHPGREDK---PEPPPEGRLPDATKGSDHLRDVFG 157
Query: 110 RNVGLNDNFDLVALSGAHTFGRAQCRTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQG 169
+ +GL D D+VALSG HT G A G
Sbjct: 158 KAMGLTDQ-DIVALSGGHTIGAAHKER-------------------------------SG 185
Query: 170 GNGSVLTNLDVTTPDVFDNKYFFNLQI--HKGLLQ--SDQELFSTPGADTAAIVNNFGRN 225
G +N P +FDN YF L +GLLQ SD+ L S P +V+ + +
Sbjct: 186 FEGPWTSN-----PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDP--VFRPLVDKYAAD 238
Query: 226 QTAFFENFVTSMIRMGNL 243
+ AFF ++ + ++ L
Sbjct: 239 EDAFFADYAEAHQKLSEL 256
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|B Chain B, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|C Chain C, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|D Chain D, Crystal Structure Of Recombinant Ascorbate Peroxidase
Length = 249
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 86/218 (39%), Gaps = 52/218 (23%)
Query: 33 GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLAN 92
G ++ + ++ P +VS AD +A +V ++GGP GR D
Sbjct: 72 GLDIAVRLLEPIKEQFP-IVSYADFYQLAGVVAVEITGGPEVPFHPGREDK---PEPPPE 127
Query: 93 ENLPGPNNSLERLKDRF-RNVGLNDNFDLVALSGAHTFGRAQCRTFSDRLFNFNSTGNPD 151
LP + L+D F + +GL+D D+VALSG HT G A
Sbjct: 128 GRLPDATKGSDHLRDVFGKAMGLSDQ-DIVALSGGHTIGAAHKER--------------- 171
Query: 152 PXXXXXXXXXXXXXCPQGGNGSVLTNLDVTTPDVFDNKYFFNLQIHK--GLLQ--SDQEL 207
G G +N P +FDN YF L + GLLQ SD+ L
Sbjct: 172 ----------------SGFEGPWTSN-----PLIFDNSYFTELLTGEKDGLLQLPSDKAL 210
Query: 208 FSTPGADTA--AIVNNFGRNQTAFFENFVTSMIRMGNL 243
+ D+ +V + ++ FF ++ + +++ L
Sbjct: 211 LT----DSVFRPLVEKYAADEDVFFADYAEAHLKLSEL 244
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major
Peroxidase-Cytochrome C Complex
Length = 268
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Query: 32 RGFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLA 91
+G ++ +++ P + S AD+ +AA ++ GGP+ GR D++ +
Sbjct: 66 KGLDIPRKALETLKKKYPQI-SYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVCGP 124
Query: 92 NENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQ 133
+ LP + + +++ FR +G ND + VAL GAHT G
Sbjct: 125 DGRLPDGSKTQSHVREVFRRLGFNDQ-ETVALIGAHTCGECH 165
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase
pdb|3RIV|B Chain B, The Crystal Structure Of Leishmania Major Peroxidase
Length = 271
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Query: 32 RGFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLA 91
+G ++ +++ P + S AD+ +AA ++ GGP+ GR D++ +
Sbjct: 67 KGLDIPRKALETLKKKYPQI-SYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVCGP 125
Query: 92 NENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQ 133
+ LP + + +++ FR +G ND + VAL GAHT G
Sbjct: 126 DGRLPDGSKTQSHVREVFRRLGFNDQ-ETVALIGAHTCGECH 166
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase
Mutant C197t
pdb|3RIW|B Chain B, The Crystal Structure Of Leishmania Major Peroxidase
Mutant C197t
Length = 271
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Query: 32 RGFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLA 91
+G ++ +++ P + S AD+ +AA ++ GGP+ GR D++ +
Sbjct: 67 KGLDIPRKALETLKKKYPQI-SYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVCGP 125
Query: 92 NENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQ 133
+ LP + + +++ FR +G ND + VAL GAHT G
Sbjct: 126 DGRLPDGSKTQSHVREVFRRLGFNDQ-ETVALIGAHTCGETH 166
>pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In
Cytochrome C Peroxidase (Ccp)
Length = 294
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 93/245 (37%), Gaps = 65/245 (26%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 70 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 124
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + + ++ F+ + +ND ++VAL GAHT G+
Sbjct: 125 PWRCGRVDT-PEDTTPDNGRLPDADKDADYVRTFFQRLNMNDR-EVVALMGAHTLGKTHL 182
Query: 135 RTFSDRLFNFNSTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDVTTPDVFDNKYFFNL 194
+ G G N P+VFDN ++ NL
Sbjct: 183 KN-------------------------------SGYEGPWTAN-----PNVFDNSFYLNL 206
Query: 195 -----QIHKG--------------LLQSDQELFSTPGADTAAIVNNFGRNQTAFFENFVT 235
++ K +L +D L P +IV + +Q FF++F
Sbjct: 207 LNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDP--KYLSIVKEYANDQDKFFKDFSK 264
Query: 236 SMIRM 240
+ ++
Sbjct: 265 AFEKL 269
>pdb|1STQ|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant:
Ccpk2m3
Length = 294
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 70 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 124
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + + ++ F+ + +ND ++VALSGAHT G+
Sbjct: 125 PWRCGRVDT-PEDTTPDNGRLPDADKDADYVRTFFQRLNMNDR-EVVALSGAHTLGKTHL 182
Query: 135 R 135
+
Sbjct: 183 K 183
>pdb|1YYD|A Chain A, High Resolution Crystal Structure Of Manganese Peroxidase
pdb|1YYG|A Chain A, Manganese Peroxidase Complexed With Cd(Ii) Inhibitor
pdb|1YZP|A Chain A, Substrate-free Manganese Peroxidase
pdb|1YZR|A Chain A, Manganese Peroxidase-Sm(Iii) Complex
pdb|1MNP|A Chain A, Manganese Peroxidase
pdb|3M5Q|A Chain A, 0.93 A Structure Of Manganese-Bound Manganese Peroxidase
pdb|3M8M|A Chain A, 1.05 A Structure Of Manganese-Free Manganese Peroxidase
Length = 357
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 12/86 (13%)
Query: 52 VSCADILTIAAEQSVALS---GGPSWTNLLGRRDSRTANRTLANEN--LPGPNNSLERLK 106
+S AD++ A +VALS G P L GR N+T+A + +P P +S+ ++
Sbjct: 100 ISAADLVQFAG--AVALSNCPGAPRLEFLAGR-----PNKTIAAVDGLIPEPQDSVTKIL 152
Query: 107 DRFRNVGLNDNFDLVALSGAHTFGRA 132
RF + G F++V+L +H+ RA
Sbjct: 153 QRFEDAGGFTPFEVVSLLASHSVARA 178
>pdb|1MN2|A Chain A, Manganese Peroxidase Substrate Binding Site Mutant E35q,
D179n
Length = 357
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 12/86 (13%)
Query: 52 VSCADILTIAAEQSVALS---GGPSWTNLLGRRDSRTANRTLANEN--LPGPNNSLERLK 106
+S AD++ A +VALS G P L GR N+T+A + +P P +S+ ++
Sbjct: 100 ISAADLVQFAG--AVALSNCPGAPRLEFLAGR-----PNKTIAAVDGLIPEPQDSVTKIL 152
Query: 107 DRFRNVGLNDNFDLVALSGAHTFGRA 132
RF + G F++V+L +H+ RA
Sbjct: 153 QRFEDAGGFTPFEVVSLLASHSVARA 178
>pdb|1MN1|A Chain A, Manganese Peroxidase Substrate Binding Site Mutant D179n
Length = 357
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 12/86 (13%)
Query: 52 VSCADILTIAAEQSVALS---GGPSWTNLLGRRDSRTANRTLANEN--LPGPNNSLERLK 106
+S AD++ A +VALS G P L GR N+T+A + +P P +S+ ++
Sbjct: 100 ISAADLVQFAG--AVALSNCPGAPRLEFLAGR-----PNKTIAAVDGLIPEPQDSVTKIL 152
Query: 107 DRFRNVGLNDNFDLVALSGAHTFGRA 132
RF + G F++V+L +H+ RA
Sbjct: 153 QRFEDAGGFTPFEVVSLLASHSVARA 178
>pdb|1JDR|A Chain A, Crystal Structure Of A Proximal Domain Potassium Binding
Variant Of Cytochrome C Peroxidase
Length = 294
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 70 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 124
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + + ++ F+ + +ND ++VAL GAHT G+
Sbjct: 125 PWRCGRVDT-PEDTTPDNGRLPDADKDADYVRTFFQRLNMNDR-EVVALMGAHTLGKTHL 182
Query: 135 R 135
+
Sbjct: 183 K 183
>pdb|1KRJ|A Chain A, Engineering Calcium-Binding Site Into Cytochrome C
Peroxidase (Ccp)
Length = 294
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 70 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 124
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + + ++ F+ + +ND ++VAL GAHT G+
Sbjct: 125 PWRCGRVDT-PEDTTPDNGRLPDADKDADYVRTFFQRLNMNDR-EVVALMGAHTLGKTHL 182
Query: 135 R 135
+
Sbjct: 183 K 183
>pdb|1SOG|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant:
Ccpk2m2
Length = 294
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 70 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 124
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + + ++ F+ + +ND ++VAL GAHT G+
Sbjct: 125 PWRCGRVDT-PEDTTPDNGRLPDADKDADYVRTFFQRLNMNDR-EVVALMGAHTLGKTHL 182
Query: 135 R 135
+
Sbjct: 183 K 183
>pdb|2XJ5|A Chain A, The Structure Of Cytochrome C Peroxidase Compound Ii
pdb|2XJ8|A Chain A, The Structure Of Ferrous Cytochrome C Peroxidase
Length = 294
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 70 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 124
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + + ++ F+ + +ND ++VAL GAH G+
Sbjct: 125 PWRCGRVDT-PEDTTPDNGRLPDADKDADYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 182
Query: 135 R 135
+
Sbjct: 183 K 183
>pdb|2XIL|A Chain A, The Structure Of Cytochrome C Peroxidase Compound I
Length = 294
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 70 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 124
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + + ++ F+ + +ND ++VAL GAH G+
Sbjct: 125 PWRCGRVDT-PEDTTPDNGRLPDADKDADYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 182
Query: 135 R 135
+
Sbjct: 183 K 183
>pdb|1S6V|A Chain A, Structure Of A Cytochrome C Peroxidase-Cytochrome C Site
Specific Cross-Link
pdb|1S6V|C Chain C, Structure Of A Cytochrome C Peroxidase-Cytochrome C Site
Specific Cross-Link
Length = 294
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 70 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 124
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + + ++ F+ + +ND ++VAL GAH G+
Sbjct: 125 PWRAGRVDT-PEDTTPDNGRLPDADKDADYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 182
Query: 135 R 135
+
Sbjct: 183 K 183
>pdb|1MK8|A Chain A, Crystal Structure Of A Mutant Cytochrome C Peroxidase
Showing A Novel Trp-Tyr Covalent Cross-Link
pdb|1MKQ|A Chain A, Crystal Structure Of The Mutant Variant Of Cytochrome C
Peroxidase In The 'open' Uncross-Linked Form
pdb|1MKR|A Chain A, Crystal Structure Of A Mutant Variant Of Cytochrome C
Peroxidase (Plate Like Crystals)
pdb|1ML2|A Chain A, Crystal Structure Of A Mutant Variant Of Cytochrome C
Peroxidase With Zn(Ii)-(20-Oxo-Protoporphyrin Ix)
Length = 294
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 70 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 124
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + + ++ F+ + +ND ++VAL GAH G+
Sbjct: 125 PWRCGRVDT-PEDTTPDNGRLPDADKDADYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 182
Query: 135 R 135
+
Sbjct: 183 K 183
>pdb|2X07|A Chain A, Cytochrome C Peroxidase: Engineered Ascorbate Binding Site
pdb|2X08|A Chain A, Cytochrome C Peroxidase: Ascorbate Bound To The Engineered
Ascorbate Binding Site
Length = 293
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 69 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 123
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + + ++ F+ + +ND ++VAL GAH G+
Sbjct: 124 PWRCGRVDT-PEDTTPDNGRLPDADKDADYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 181
Query: 135 R 135
+
Sbjct: 182 K 182
>pdb|3M23|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M25|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M26|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M27|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M28|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M29|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2A|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2B|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2C|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2D|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2E|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2F|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2G|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2H|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2I|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
Length = 291
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 67 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 121
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + + ++ F+ + +ND ++VAL GAH G+
Sbjct: 122 PWRCGRVDT-PEDTTPDNGRLPDADKDADYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 179
Query: 135 R 135
+
Sbjct: 180 K 180
>pdb|1KOK|A Chain A, Crystal Structure Of Mesopone Cytochrome C Peroxidase
(Mpccp)
pdb|1ZBY|A Chain A, High-resolution Crystal Structure Of Native (resting)
Cytochrome C Peroxidase (ccp)
pdb|1ZBZ|A Chain A, High-Resolution Crystal Structure Of Compound I
Intermediate Of Cytochrome C Peroxidase (Ccp)
pdb|1S73|A Chain A, Crystal Structure Of Mesopone Cytochrome C Peroxidase (R-
Isomer) [mpccp-R]
pdb|1SBM|A Chain A, Crystal Structure Of Reduced Mesopone Cytochrome C
Peroxidase (R-Isomer)
pdb|1Z53|A Chain A, The 1.13 Angstrom Structure Of Iron-Free Cytochrome C
Peroxidase
pdb|1SDQ|A Chain A, Structure Of Reduced-No Adduct Of Mesopone Cytochrome C
Peroxidase
pdb|2B0Z|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82i Cytochrome C And Cytochrome C Peroxidase
pdb|2B10|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82s Cytochrome C And Cytochrome C Peroxidase
pdb|2B10|C Chain C, Crystal Structure Of The Protein-Protein Complex Between
F82s Cytochrome C And Cytochrome C Peroxidase
pdb|2B11|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82w Cytochrome C And Cytochrome C Peroxidase
pdb|2B11|C Chain C, Crystal Structure Of The Protein-Protein Complex Between
F82w Cytochrome C And Cytochrome C Peroxidase
pdb|2B12|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82y Cytochrome C And Cytochrome C Peroxidase
pdb|2CYP|A Chain A, Crystal Structure Of Yeast Cytochrome C Peroxidase Refined
At 1.7-Angstroms Resolution
pdb|2YCG|A Chain A, Structure Of Unreduced Ferric Cytochrome C Peroxidase
Obtained By Multicrystal Method
Length = 294
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 70 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 124
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + + ++ F+ + +ND ++VAL GAH G+
Sbjct: 125 PWRCGRVDT-PEDTTPDNGRLPDADKDADYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 182
Query: 135 R 135
+
Sbjct: 183 K 183
>pdb|4A78|A Chain A, Cytochrome C Peroxidase M119w In Complex With Guiacol
Length = 296
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 72 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEWQGPKI 126
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + + ++ F+ + +ND ++VAL GAH G+
Sbjct: 127 PWRCGRVDT-PEDTTPDNGRLPDADKDADYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 184
Query: 135 R 135
+
Sbjct: 185 K 185
>pdb|3R98|A Chain A, Joint Neutron And X-Ray Structure Of Cytochrome C
Peroxidase
pdb|3R99|A Chain A, Joint Neutron And X-Ray Structure Of Cytochrome C
Peroxidase
Length = 293
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 69 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 123
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + + ++ F+ + +ND ++VAL GAH G+
Sbjct: 124 PWRCGRVDT-PEDTTPDNGRLPDADKDADYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 181
Query: 135 R 135
+
Sbjct: 182 K 182
>pdb|1EBE|A Chain A, Laue Diffraction Study On The Structure Of Cytochrome C
Peroxidase Compound I
Length = 294
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 70 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 124
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + + ++ F+ + +ND ++VAL GAH G+
Sbjct: 125 PWRCGRVDT-PEDTTPDNGRLPDADKDADYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 182
Query: 135 R 135
+
Sbjct: 183 K 183
>pdb|3E2O|A Chain A, Crystal Structure Of Cytochrome C Peroxidase, N184r Mutant
Length = 294
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 70 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 124
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + + ++ F+ + +ND ++VAL GAH G+
Sbjct: 125 PWRCGRVDT-PEDTTPDNGRLPDADKDADYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 182
Query: 135 R 135
+
Sbjct: 183 K 183
>pdb|4A71|A Chain A, Cytochrome C Peroxidase In Complex With Phenol
Length = 296
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 72 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 126
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + + ++ F+ + +ND ++VAL GAH G+
Sbjct: 127 PWRCGRVDT-PEDTTPDNGRLPDADKDADYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 184
Query: 135 R 135
+
Sbjct: 185 K 185
>pdb|2V2E|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytochrome C
Peroxidase Mutant N184r Y36a
Length = 294
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 70 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 124
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + + ++ F+ + +ND ++VAL GAH G+
Sbjct: 125 PWRCGRVDT-PEDTTPDNGRLPDADKDADYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 182
Query: 135 R 135
+
Sbjct: 183 K 183
>pdb|3E2N|A Chain A, Engineering Ascorbate Peroxidase Activity Into Cytochrome
C Peroxidase
Length = 287
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 63 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 117
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + + ++ F+ + +ND ++VAL GAH G+
Sbjct: 118 PWRCGRVDT-PEDTTPDNGRLPDADKDADYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 175
Query: 135 R 135
+
Sbjct: 176 K 176
>pdb|2V23|A Chain A, Structure Of Cytochrome C Peroxidase Mutant N184r Y36a
pdb|4A6Z|A Chain A, Cytochrome C Peroxidase With Bound Guaiacol
Length = 296
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 72 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 126
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + + ++ F+ + +ND ++VAL GAH G+
Sbjct: 127 PWRCGRVDT-PEDTTPDNGRLPDADKDADYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 184
Query: 135 R 135
+
Sbjct: 185 K 185
>pdb|4A7M|A Chain A, Cytochrome C Peroxidase S81w Mutant
Length = 296
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 44 VERACPGVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLE 103
+ + P +S D+ ++ +V GP GR D+ + T N LP + +
Sbjct: 97 IHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT-PEDTTPDNGRLPDADKDAD 154
Query: 104 RLKDRFRNVGLNDNFDLVALSGAHTFGRAQCR 135
++ F+ + +ND ++VAL GAH G+ +
Sbjct: 155 YVRTFFQRLNMNDR-EVVALMGAHALGKTHLK 185
>pdb|1A2F|A Chain A, Probing The Strength And Character Of An Asp-His-X
Hydrogen Bond By Introducing Buried Charges
Length = 291
Score = 35.4 bits (80), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 67 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 121
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 122 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALKGAHALGKTHL 179
Query: 135 R 135
+
Sbjct: 180 K 180
>pdb|2IA8|A Chain A, Kinetic And Crystallographic Studies Of A Redesigned
Manganese-Binding Site In Cytochrome C Peroxidase
pdb|2ICV|A Chain A, Kinetic And Crystallographic Studies Of A Redesigned
Manganese-Binding Site In Cytochrome C Peroxidase
Length = 291
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 67 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 121
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+ +
Sbjct: 122 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTEL 179
Query: 135 R 135
+
Sbjct: 180 K 180
>pdb|1CYF|A Chain A, Identifying The Physiological Electron Transfer Site Of
Cytochrome C Peroxidase By Structure-Based Engineering
Length = 296
Score = 35.0 bits (79), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 72 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 126
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 127 PWRAGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 184
Query: 135 R 135
+
Sbjct: 185 K 185
>pdb|3EXB|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A
Proposed Electron Pathway Excised In A Complex With A
Peptide Wire
Length = 295
Score = 35.0 bits (79), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 73 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 127
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 128 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 185
Query: 135 R 135
+
Sbjct: 186 K 186
>pdb|2AQD|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,5-
Diaminopyridine
pdb|2AS1|A Chain A, Cytochrome C Peroxidase In Complex With Thiopheneamidine
pdb|2AS2|A Chain A, Cytochrome C Peroxidase In Complex With 2-Iminopiperidine
pdb|2AS3|A Chain A, Cytochrome C Peroxidase In Complex With Phenol
pdb|2AS4|A Chain A, Cytochrome C Peroxidase In Complex With 3-Fluorocatechol
pdb|2AS6|A Chain A, Cytochrome C Peroxidase In Complex With Cyclopentylamine
pdb|2EUN|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,4-
Diaminopyrimidine
pdb|2EUO|A Chain A, Cytochrome C Peroxidase (ccp) In Complex With 1-methyl-1-
Lambda-5-pyridin-3-yl-amine
pdb|2EUP|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2-Amino-5-
Picoline
pdb|2EUQ|A Chain A, Cytochrome C Peroxydase (Ccp) In Complex With 3-
Thienylmethylamine
pdb|2EUR|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 4-
Pyridylcarbinol
pdb|2EUS|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With Benzylamine
pdb|2EUT|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2-Amino-4-
Picoline
pdb|2EUU|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With
1h-Imidazol-2- Ylmethanol
pdb|1AA4|A Chain A, Specificity Of Ligand Binding In A Buried Polar Cavity Of
Cytochrome C Peroxidase
pdb|1CMP|A Chain A, Small Molecule Binding To An Artificially Created Cavity
At The Active Site Of Cytochrome C Peroxidase
pdb|1CMQ|A Chain A, Small Molecule Binding To An Artificially Created Cavity
At The Active Site Of Cytochrome C Peroxidase
pdb|1CMT|A Chain A, The Role Of Aspartate-235 In The Binding Of Cations To An
Artificial Cavity At The Radical Site Of Cytochrome C
Peroxidase
pdb|1RYC|A Chain A, Cytochrome C Peroxidase W191g From Saccharomyces
Cerevisiae
pdb|2Y5A|A Chain A, Cytochrome C Peroxidase (Ccp) W191g Bound To
3-Aminopyridine
Length = 294
Score = 35.0 bits (79), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 70 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 124
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 125 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 182
Query: 135 R 135
+
Sbjct: 183 K 183
>pdb|2ANZ|A Chain A, Cytochrome C Peroxidase In Complex With
2,6-Diaminopyridine
pdb|1AC4|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (2,3,4-Trimethyl-1,3-Thiazole)
pdb|1AC8|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (3,4,5-Trimethylthiazole)
pdb|1AEB|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (3-
Methylthiazole)
pdb|1AED|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (3,4-
Dimethylthiazole)
pdb|1AEE|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Aniline)
pdb|1AEF|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (3-
Aminopyridine)
pdb|1AEG|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (4-
Aminopyridine)
pdb|1AEH|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (2-Amino-4-
Methylthiazole)
pdb|1AEJ|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (1-
Vinylimidazole)
pdb|1AEK|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Indoline)
pdb|1AEM|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Imidazo[1,2-
A]pyridine)
pdb|1AEN|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (2-Amino-5-
Methylthiazole)
pdb|1AEO|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (2-
Aminopyridine)
pdb|1AEQ|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (2-Ethylimidazole)
pdb|1AES|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Imidazole)
pdb|1AET|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (1-Methylimidazole)
pdb|1AEU|A Chain A, Specificity Of Ligand Binding In A Polar Cavity Of
Cytochrome C Peroxidase (2-Methylimidazole)
pdb|1AEV|A Chain A, Introduction Of Novel Substrate Oxidation Into Cytochrome
C Peroxidase By Cavity Complementation: Oxidation Of 2-
Aminothiazole And Covalent Modification Of The Enzyme
(2- Aminothiazole)
Length = 294
Score = 35.0 bits (79), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 70 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 124
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 125 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 182
Query: 135 R 135
+
Sbjct: 183 K 183
>pdb|4CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 35.0 bits (79), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 72 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 126
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 127 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 184
Query: 135 R 135
+
Sbjct: 185 K 185
>pdb|1DCC|A Chain A, 2.2 Angstrom Structure Of Oxyperoxidase: A Model For The
Enzyme:peroxide Complex
pdb|3CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 35.0 bits (79), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 72 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 126
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 127 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 184
Query: 135 R 135
+
Sbjct: 185 K 185
>pdb|1CPD|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
pdb|1CPE|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
pdb|1CPF|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
Length = 296
Score = 35.0 bits (79), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 72 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 126
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 127 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 184
Query: 135 R 135
+
Sbjct: 185 K 185
>pdb|5CCP|A Chain A, Histidine 52 Is A Critical Residue For Rapid Formation Of
Cytochrome C Peroxidase Compound I
Length = 296
Score = 35.0 bits (79), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 72 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 126
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 127 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 184
Query: 135 R 135
+
Sbjct: 185 K 185
>pdb|1KXN|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A
Proposed Electron Transfer Pathway Excised To Form A
Ligand Binding Channel
Length = 289
Score = 35.0 bits (79), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 67 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 121
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 122 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 179
Query: 135 R 135
+
Sbjct: 180 K 180
>pdb|2CEP|A Chain A, Role Of Met-230 In Intramolecular Electron Transfer
Between The Oxyferryl Heme And Trp 191 In Cytochrome C
Peroxidase Compound Ii
Length = 296
Score = 35.0 bits (79), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 72 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 126
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 127 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 184
Query: 135 R 135
+
Sbjct: 185 K 185
>pdb|1KXM|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A
Proposed Electron Transfer Pathway Excised To Form A
Ligand Binding Channel
Length = 290
Score = 35.0 bits (79), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 68 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 122
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 123 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 180
Query: 135 R 135
+
Sbjct: 181 K 181
>pdb|1BEQ|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
pdb|1BES|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
Length = 291
Score = 35.0 bits (79), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 67 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 121
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 122 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 179
Query: 135 R 135
+
Sbjct: 180 K 180
>pdb|1CMU|A Chain A, The Role Of Aspartate-235 In The Binding Of Cations To An
Artificial Cavity At The Radical Site Of Cytochrome C
Peroxidase
Length = 294
Score = 35.0 bits (79), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 70 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 124
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 125 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 182
Query: 135 R 135
+
Sbjct: 183 K 183
>pdb|2PCB|A Chain A, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|2PCB|C Chain C, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|2PCC|A Chain A, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|2PCC|C Chain C, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|1U74|A Chain A, Electron Transfer Complex Between Cytochrome C And
Cytochrome C Peroxidase
pdb|1U74|C Chain C, Electron Transfer Complex Between Cytochrome C And
Cytochrome C Peroxidase
pdb|1U75|A Chain A, Electron Transfer Complex Between Horse Heart Cytochrome C
And Zinc- Porphyrin Substituted Cytochrome C Peroxidase
pdb|1U75|C Chain C, Electron Transfer Complex Between Horse Heart Cytochrome C
And Zinc- Porphyrin Substituted Cytochrome C Peroxidase
pdb|2BCN|A Chain A, Solvent Isotope Effects On Interfacial Protein Electron
Transfer Between Cytochrome C And Cytochrome C
Peroxidase
pdb|2BCN|C Chain C, Solvent Isotope Effects On Interfacial Protein Electron
Transfer Between Cytochrome C And Cytochrome C
Peroxidase
pdb|1CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 35.0 bits (79), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 72 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 126
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 127 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 184
Query: 135 R 135
+
Sbjct: 185 K 185
>pdb|1BEM|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
Length = 291
Score = 35.0 bits (79), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 67 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 121
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 122 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 179
Query: 135 R 135
+
Sbjct: 180 K 180
>pdb|2RBU|X Chain X, Cytochrome C Peroxidase In Complex With
Cyclopentane-Carboximidamide
pdb|2RBV|X Chain X, Cytochrome C Peroxidase In Complex With
(1-Methyl-1h-Pyrrol-2-Yl)- Methylamine
pdb|2RBW|X Chain X, Cytochrome C Peroxidase W191g In Complex With
1,2-dimethyl-1h-pyridin- 5-amine
pdb|2RBY|X Chain X, 1-methyl-5-imidazolecarboxaldehyde In Complex With
Cytochrome C Peroxidase W191g
pdb|2RBZ|X Chain X, Cytochrome C Peroxidase W191g In Complex 3-Methoxypyridine
pdb|2RC0|X Chain X, Cytochrome C Peroxidase W191g In Complex With 2-Imino-4-
Methylpiperdine
pdb|2RC2|X Chain X, Cytochrome C Peroxidase W191g In Complex With
1-Methyl-2-Vinyl- Pyridinium
pdb|2RBT|X Chain X, N-Methylbenzylamine In Complex With Cytochrome C
Peroxidase W191g
pdb|2RBX|X Chain X, Cytochrome C Peroxidase W191g In Complex With
Pyrimidine-2,4,6- Triamine.
pdb|2RC1|X Chain X, Cytochrome C Peroxidase W191g In Complex With
2,4,5-Trimethyl-3- Oxazoline
Length = 292
Score = 35.0 bits (79), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 68 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 122
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 123 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 180
Query: 135 R 135
+
Sbjct: 181 K 181
>pdb|1BEJ|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
Length = 291
Score = 35.0 bits (79), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 67 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 121
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 122 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 179
Query: 135 R 135
+
Sbjct: 180 K 180
>pdb|7CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between
Cytochrome C Peroxidase And Hydrogen Peroxide
Length = 296
Score = 35.0 bits (79), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 72 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 126
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 127 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 184
Query: 135 R 135
+
Sbjct: 185 K 185
>pdb|2CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 35.0 bits (79), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 72 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 126
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 127 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 184
Query: 135 R 135
+
Sbjct: 185 K 185
>pdb|1BVA|A Chain A, Manganese Binding Mutant In Cytochrome C Peroxidase
Length = 294
Score = 35.0 bits (79), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 70 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 124
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 125 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 182
Query: 135 R 135
+
Sbjct: 183 K 183
>pdb|1CPG|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
Length = 296
Score = 35.0 bits (79), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 72 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 126
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 127 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 184
Query: 135 R 135
+
Sbjct: 185 K 185
>pdb|1BEP|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of
Electron Transfer In Cytochrome C Peroxidase
pdb|1BJ9|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of
Electron Transfer In Cytochrome C Peroxidase
Length = 291
Score = 34.7 bits (78), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 67 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 121
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 122 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 179
Query: 135 R 135
+
Sbjct: 180 K 180
>pdb|1CCI|A Chain A, How Flexible Are Proteins? Trapping Of A Flexible Loop
pdb|1CCJ|A Chain A, Conformer Selection By Ligand Binding Observed With
Protein Crystallography
Length = 294
Score = 34.7 bits (78), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 70 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 124
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 125 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 182
Query: 135 R 135
+
Sbjct: 183 K 183
>pdb|6CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between
Cytochrome C Peroxidase And Hydrogen Peroxide
Length = 296
Score = 34.7 bits (78), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 72 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 126
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 127 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 184
Query: 135 R 135
+
Sbjct: 185 K 185
>pdb|1DJ1|A Chain A, Crystal Structure Of R48a Mutant Of Cytochrome C
Peroxidase
pdb|1DJ5|A Chain A, Crystal Structure Of R48a Mutant Of Cytochrome C
Peroxidase With N-Hydroxyguanidine Bound
Length = 291
Score = 34.7 bits (78), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 67 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 121
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 122 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 179
Query: 135 R 135
+
Sbjct: 180 K 180
>pdb|1CCA|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls
The Reduction Potential, Electronic Structure, And
Coupling Of The Tryptophan Free-Radical To The Heme
Length = 297
Score = 34.7 bits (78), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 73 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 127
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 128 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 185
Query: 135 R 135
+
Sbjct: 186 K 186
>pdb|2GB8|A Chain A, Solution Structure Of The Complex Between Yeast Iso-1-
Cytochrome C And Yeast Cytochrome C Peroxidase
pdb|2JTI|A Chain A, Solution Structure Of The Yeast Iso-1-Cytochrome C (T12a)
: Yeast Cytochrome C Peroxidase Complex
Length = 294
Score = 34.7 bits (78), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 70 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 124
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 125 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 182
Query: 135 R 135
+
Sbjct: 183 K 183
>pdb|1CCC|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls
The Reduction Potential, Electronic Structure, And
Coupling Of The Tryptophan Free-Radical To The Heme
Length = 297
Score = 34.7 bits (78), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 73 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 127
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 128 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 185
Query: 135 R 135
+
Sbjct: 186 K 186
>pdb|1CCB|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls
The Reduction Potential, Electronic Structure, And
Coupling Of The Tryptophan Free-Radical To The Heme
Length = 297
Score = 34.7 bits (78), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 73 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 127
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 128 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 185
Query: 135 R 135
+
Sbjct: 186 K 186
>pdb|1A2G|A Chain A, Probing The Strength And Character Of An Asp-His-X
Hydrogen Bond By Introducing Buried Charges
Length = 291
Score = 34.7 bits (78), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 67 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 121
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 122 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 179
Query: 135 R 135
+
Sbjct: 180 K 180
>pdb|1BEK|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of
Electron Transfer In Cytochrome C Peroxidase
Length = 291
Score = 34.7 bits (78), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 67 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 121
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 122 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 179
Query: 135 R 135
+
Sbjct: 180 K 180
>pdb|1CCK|A Chain A, Altering Substrate Specificity Of Cytochrome C Peroxidase
Towards A Small Molecular Substrate Peroxidase By
Substituting Tyrosine For Phe 202
Length = 291
Score = 34.7 bits (78), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 67 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 121
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 122 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 179
Query: 135 R 135
+
Sbjct: 180 K 180
>pdb|1CCL|A Chain A, Probing The Strength And Character Of An Asp-His-X
Hydrogen Bond By Introducing Buried Charges
Length = 291
Score = 34.7 bits (78), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 67 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 121
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 122 PWRCGRVDT-PEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 179
Query: 135 R 135
+
Sbjct: 180 K 180
>pdb|3CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of
Cytochrome C Peroxidase
Length = 294
Score = 34.7 bits (78), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 70 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 124
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 125 PWRCGRVDT-PEDTTPDNGRLPDYDKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 182
Query: 135 R 135
+
Sbjct: 183 K 183
>pdb|4CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of
Cytochrome C Peroxidase
Length = 294
Score = 34.3 bits (77), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 16 TTIVSEKFAAPNNNSAR-GFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSW 74
T ++F P+N + GF+ ++ + + P +S D+ ++ +V GP
Sbjct: 70 TYRFKKEFNDPSNAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKI 124
Query: 75 TNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQC 134
GR D+ + T N LP + ++ F+ + +ND ++VAL GAH G+
Sbjct: 125 PWRCGRVDT-PEDTTPDNGRLPDMDKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTHL 182
Query: 135 R 135
+
Sbjct: 183 K 183
>pdb|3UT2|A Chain A, Crystal Structure Of Fungal Magkatg2
pdb|3UT2|B Chain B, Crystal Structure Of Fungal Magkatg2
Length = 764
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 96 PGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQ 133
P P S + +++ F +G+ND + ++G H FG+
Sbjct: 261 PDPAASAKDIREAFGRMGMNDTETVALIAGGHAFGKTH 298
>pdb|3N3Q|A Chain A, Crystal Structure Of The S324t Variant Of Burkholderia
Pseudomallei Katg With Isonicotinic Acid Hydrazide Bound
pdb|3N3Q|B Chain B, Crystal Structure Of The S324t Variant Of Burkholderia
Pseudomallei Katg With Isonicotinic Acid Hydrazide Bound
Length = 748
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 9/103 (8%)
Query: 96 PGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQCRTFSDRLFNFNSTGNPDPXXX 155
P P + ++D F + +ND + ++G HTFG+ + N P+
Sbjct: 248 PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTHGAGPAS-----NVGAEPEAAGI 302
Query: 156 XXXXXXXXXXCPQG-GNGSVLTNLDV---TTPDVFDNKYFFNL 194
G G ++ T L+V TTP + + +F NL
Sbjct: 303 EAQGLGWKSAYRTGKGADAITTGLEVTWTTTPTQWSHNFFENL 345
>pdb|1X7U|A Chain A, Crystal Structure Of The S324t Of Catalase-Peroxidase Katg
pdb|1X7U|B Chain B, Crystal Structure Of The S324t Of Catalase-Peroxidase Katg
Length = 748
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 9/103 (8%)
Query: 96 PGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQCRTFSDRLFNFNSTGNPDPXXX 155
P P + ++D F + +ND + ++G HTFG+ + N P+
Sbjct: 248 PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTHGAGPAS-----NVGAEPEAAGI 302
Query: 156 XXXXXXXXXXCPQG-GNGSVLTNLDV---TTPDVFDNKYFFNL 194
G G ++ T L+V TTP + + +F NL
Sbjct: 303 EAQGLGWKSAYRTGKGADAITTGLEVTWTTTPTQWSHNFFENL 345
>pdb|3LD1|A Chain A, Crystal Structure Of Ibv Nsp2a
Length = 359
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 29/61 (47%)
Query: 180 VTTPDVFDNKYFFNLQIHKGLLQSDQELFSTPGADTAAIVNNFGRNQTAFFENFVTSMIR 239
+T ++FD LQ+ + S + G TA +++ G N +A F+ F ++R
Sbjct: 120 LTLDEIFDPTEILWLQVAAKIQVSAMAMRRLVGEVTAKVMDALGSNMSALFQIFKQQIVR 179
Query: 240 M 240
+
Sbjct: 180 I 180
>pdb|2CCD|A Chain A, Crystal Structure Of The Catalase-Peroxidase (Katg) And
S315t Mutant From Mycobacterium Tuberculosis
pdb|2CCD|B Chain B, Crystal Structure Of The Catalase-Peroxidase (Katg) And
S315t Mutant From Mycobacterium Tuberculosis
Length = 740
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 54/144 (37%), Gaps = 29/144 (20%)
Query: 96 PGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQCRTFSDRLFNFNSTGNPDPXXX 155
P P + +++ FR + +ND + G HTFG+ +D + P+P
Sbjct: 239 PDPMAAAVDIRETFRRMAMNDVETAALIVGGHTFGKTHGAGPADLV-------GPEPEAA 291
Query: 156 XXXXXXXXXXCPQG---GNGSVLTNLDVT---TPDVFDNKYFFNLQIHKGLLQSDQELFS 209
G G ++ T ++V TP +DN + L+I G + EL
Sbjct: 292 PLEQMGLGWKSSYGTGTGKDAITTGIEVVWTNTPTKWDNSF---LEILYGY---EWELTK 345
Query: 210 TP----------GADTAAIVNNFG 223
+P GA I + FG
Sbjct: 346 SPAGAWQYTAKDGAGAGTIPDPFG 369
>pdb|1MWV|A Chain A, Crystal Structure Of Catalase-peroxidase Katg Of
Burkholderia Pseudomallei
pdb|1MWV|B Chain B, Crystal Structure Of Catalase-peroxidase Katg Of
Burkholderia Pseudomallei
pdb|2B2O|A Chain A, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph8.0
pdb|2B2O|B Chain B, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph8.0
pdb|2B2Q|A Chain A, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph7.5
pdb|2B2Q|B Chain B, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph7.5
pdb|2B2R|A Chain A, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph5.6
pdb|2B2R|B Chain B, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph5.6
pdb|2B2S|A Chain A, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph7.5
pdb|2B2S|B Chain B, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph7.5
Length = 714
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 96 PGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQ 133
P P + ++D F + +ND + ++G HTFG+
Sbjct: 214 PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH 251
>pdb|2DV1|A Chain A, Crystal Structure Of D141e Mutant Of Bpkatg
pdb|2DV1|B Chain B, Crystal Structure Of D141e Mutant Of Bpkatg
Length = 748
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 96 PGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQ 133
P P + ++D F + +ND + ++G HTFG+
Sbjct: 248 PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH 285
>pdb|2DV2|A Chain A, Crystal Structure Of D141e Mutant Of Bpkatg At Ph 8.0
pdb|2DV2|B Chain B, Crystal Structure Of D141e Mutant Of Bpkatg At Ph 8.0
Length = 748
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 96 PGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQ 133
P P + ++D F + +ND + ++G HTFG+
Sbjct: 248 PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH 285
>pdb|3N3S|A Chain A, Crystal Structure Of The E198a Variant Of Burkholderia
Pseudomallei Catalase-Peroxidase Katg With Inh
pdb|3N3S|B Chain B, Crystal Structure Of The E198a Variant Of Burkholderia
Pseudomallei Catalase-Peroxidase Katg With Inh
Length = 748
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 96 PGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQ 133
P P + ++D F + +ND + ++G HTFG+
Sbjct: 248 PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH 285
>pdb|3N3R|A Chain A, Crystal Structure Of The E198a Variant Of
Catalase-Peroxidase Katg Of Burkholderia Pseudomallei
pdb|3N3R|B Chain B, Crystal Structure Of The E198a Variant Of
Catalase-Peroxidase Katg Of Burkholderia Pseudomallei
Length = 748
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 96 PGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQ 133
P P + ++D F + +ND + ++G HTFG+
Sbjct: 248 PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH 285
>pdb|2FXJ|A Chain A, Crystal Structure Of Katg At Ph 8.5
pdb|2FXJ|B Chain B, Crystal Structure Of Katg At Ph 8.5
pdb|3N3O|A Chain A, Crystal Structure Of Burkholderia Pseudomallei Katg With
Nad Bound
pdb|3N3O|B Chain B, Crystal Structure Of Burkholderia Pseudomallei Katg With
Nad Bound
Length = 748
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 96 PGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQ 133
P P + ++D F + +ND + ++G HTFG+
Sbjct: 248 PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH 285
>pdb|2FXG|A Chain A, Crystal Structure Of Katg At Ph 4.5
pdb|2FXG|B Chain B, Crystal Structure Of Katg At Ph 4.5
pdb|2FXH|A Chain A, Crystal Structure Of Katg At Ph 6.5
pdb|2FXH|B Chain B, Crystal Structure Of Katg At Ph 6.5
pdb|3N3N|A Chain A, Crystal Structure Of B. Pseudomallei Katg With
Isonicotinic Acid Hydrazide Bound
pdb|3N3N|B Chain B, Crystal Structure Of B. Pseudomallei Katg With
Isonicotinic Acid Hydrazide Bound
pdb|3N3P|A Chain A, Crystal Structure Of Catalase-Peroxidase Katg With
Isonicotinic Acid Hydrazide And Amp Bound
pdb|3N3P|B Chain B, Crystal Structure Of Catalase-Peroxidase Katg With
Isonicotinic Acid Hydrazide And Amp Bound
Length = 748
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 96 PGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQ 133
P P + ++D F + +ND + ++G HTFG+
Sbjct: 248 PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH 285
>pdb|3VLK|A Chain A, Crystal Structure Analysis Of The Ser305ala Variant Of
Katg From Haloarcula Marismortui
pdb|3VLK|B Chain B, Crystal Structure Analysis Of The Ser305ala Variant Of
Katg From Haloarcula Marismortui
pdb|3VLL|A Chain A, Crystal Structure Analysis Of The Ser305ala Variant Of
Katg From Haloarcula Marismortui Complexes With
Inhibitor Sha
pdb|3VLL|B Chain B, Crystal Structure Analysis Of The Ser305ala Variant Of
Katg From Haloarcula Marismortui Complexes With
Inhibitor Sha
Length = 737
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 96 PGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQ 133
P P S + ++ F + +ND ++G HTFG+
Sbjct: 228 PDPEASAKNIRQTFDRMAMNDKETAALIAGGHTFGKVH 265
>pdb|3UW8|A Chain A, Crystal Structure Analysis Of The Ser305thr Variants Of
Katg From Haloarcula Marismortui
pdb|3UW8|B Chain B, Crystal Structure Analysis Of The Ser305thr Variants Of
Katg From Haloarcula Marismortui
Length = 737
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 96 PGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQ 133
P P S + ++ F + +ND ++G HTFG+
Sbjct: 228 PDPEASAKNIRQTFDRMAMNDKETAALIAGGHTFGKVH 265
>pdb|3VLH|A Chain A, Crystal Structure Analysis Of The Arg409leu Variants Of
Katg From Haloarcula Marismortui
pdb|3VLH|B Chain B, Crystal Structure Analysis Of The Arg409leu Variants Of
Katg From Haloarcula Marismortui
pdb|3VLI|A Chain A, Crystal Structure Analysis Of The Cyanide Arg409leu
Variant Katg From Haloarcula Marismortui
pdb|3VLI|B Chain B, Crystal Structure Analysis Of The Cyanide Arg409leu
Variant Katg From Haloarcula Marismortui
pdb|3VLJ|A Chain A, Crystal Structure Analysis Of The Cyanide Arg409leu
Variant Complexes With O-Dianisidine In Katg From
Haloarcula Marismortui
pdb|3VLJ|B Chain B, Crystal Structure Analysis Of The Cyanide Arg409leu
Variant Complexes With O-Dianisidine In Katg From
Haloarcula Marismortui
Length = 737
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 96 PGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQ 133
P P S + ++ F + +ND ++G HTFG+
Sbjct: 228 PDPEASAKNIRQTFDRMAMNDKETAALIAGGHTFGKVH 265
>pdb|1ITK|A Chain A, Crystal Structure Of Catalase-peroxidase From Haloarcula
Marismortui
pdb|1ITK|B Chain B, Crystal Structure Of Catalase-peroxidase From Haloarcula
Marismortui
Length = 731
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 96 PGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQ 133
P P S + ++ F + +ND ++G HTFG+
Sbjct: 228 PDPEASAKNIRQTFDRMAMNDKETAALIAGGHTFGKVH 265
>pdb|1LY8|A Chain A, The Crystal Structure Of A Mutant Enzyme Of Coprinus
Cinereus Peroxidase Provides An Understanding Of Its
Increased Thermostability And Insight Into Modelling Of
Protein Structures
pdb|1LY8|B Chain B, The Crystal Structure Of A Mutant Enzyme Of Coprinus
Cinereus Peroxidase Provides An Understanding Of Its
Increased Thermostability And Insight Into Modelling Of
Protein Structures
Length = 343
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 52 VSCADILTIAAEQSVA-LSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFR 110
VS D++ AA ++ G P L GR +S + +PGP N++ + DRF
Sbjct: 111 VSFGDLIQFAAAVGMSNCPGSPRLEFLTGRSNSSQPSPPSL---IPGPGNTVTAILDRFG 167
Query: 111 NVGLNDNFDLVALSGAHTF 129
+ G + + ++V L AH+
Sbjct: 168 DAGFSPD-EVVDLLAAHSL 185
>pdb|3VLM|A Chain A, Crystal Structure Analysis Of The Met244ala Variant Of
Katg From Haloarcula Marismortui
pdb|3VLM|B Chain B, Crystal Structure Analysis Of The Met244ala Variant Of
Katg From Haloarcula Marismortui
Length = 737
Score = 28.5 bits (62), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 96 PGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQ 133
P P S + ++ F +ND ++G HTFG+
Sbjct: 228 PDPEASAKNIRQTFDRAAMNDKETAALIAGGHTFGKVH 265
>pdb|1SJ2|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
Catalase-Peroxidase
pdb|1SJ2|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis
Catalase-Peroxidase
Length = 743
Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 54/144 (37%), Gaps = 29/144 (20%)
Query: 96 PGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQCRTFSDRLFNFNSTGNPDPXXX 155
P P + +++ FR + +ND + G HTFG+ +D + P+P
Sbjct: 242 PDPMAAAVDIRETFRRMAMNDVETAALIVGGHTFGKTHGAGPADLV-------GPEPEAA 294
Query: 156 XXXXXXXXXXCPQG---GNGSVLTNLDVT---TPDVFDNKYFFNLQIHKGLLQSDQELFS 209
G G ++ + ++V TP +DN + L+I G + EL
Sbjct: 295 PLEQMGLGWKSSYGTGTGKDAITSGIEVVWTNTPTKWDNSF---LEILYGY---EWELTK 348
Query: 210 TP----------GADTAAIVNNFG 223
+P GA I + FG
Sbjct: 349 SPAGAWQYTAKDGAGAGTIPDPFG 372
>pdb|2CCA|A Chain A, Crystal Structure Of The Catalase-Peroxidase (Katg) And
S315t Mutant From Mycobacterium Tuberculosis
pdb|2CCA|B Chain B, Crystal Structure Of The Catalase-Peroxidase (Katg) And
S315t Mutant From Mycobacterium Tuberculosis
Length = 740
Score = 28.5 bits (62), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 54/144 (37%), Gaps = 29/144 (20%)
Query: 96 PGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQCRTFSDRLFNFNSTGNPDPXXX 155
P P + +++ FR + +ND + G HTFG+ +D + P+P
Sbjct: 239 PDPMAAAVDIRETFRRMAMNDVETAALIVGGHTFGKTHGAGPADLV-------GPEPEAA 291
Query: 156 XXXXXXXXXXCPQG---GNGSVLTNLDVT---TPDVFDNKYFFNLQIHKGLLQSDQELFS 209
G G ++ + ++V TP +DN + L+I G + EL
Sbjct: 292 PLEQMGLGWKSSYGTGTGKDAITSGIEVVWTNTPTKWDNSF---LEILYGY---EWELTK 345
Query: 210 TP----------GADTAAIVNNFG 223
+P GA I + FG
Sbjct: 346 SPAGAWQYTAKDGAGAGTIPDPFG 369
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.133 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,032,585
Number of Sequences: 62578
Number of extensions: 311575
Number of successful extensions: 693
Number of sequences better than 100.0: 121
Number of HSP's better than 100.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 591
Number of HSP's gapped (non-prelim): 123
length of query: 281
length of database: 14,973,337
effective HSP length: 98
effective length of query: 183
effective length of database: 8,840,693
effective search space: 1617846819
effective search space used: 1617846819
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)