BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023512
(281 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255540203|ref|XP_002511166.1| conserved hypothetical protein [Ricinus communis]
gi|223550281|gb|EEF51768.1| conserved hypothetical protein [Ricinus communis]
Length = 545
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 245/268 (91%), Positives = 255/268 (95%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNP FVLSDTLA
Sbjct: 79 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPVFVLSDTLA 138
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK+
Sbjct: 139 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKN 198
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WGT+ SGPNTFIETLRERMFRPSLSTI+PE SKVVT+ PT+TVL TKKMLE R SSAVV
Sbjct: 199 WGTTFSGPNTFIETLRERMFRPSLSTILPENSKVVTVLPTETVLAVTKKMLESRSSSAVV 258
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
V+ KPRGILTSKDILMRVI+QNLP+DSTL EKVMTPNPECATIDTPIVDALH MHDGKF
Sbjct: 259 IVDQKPRGILTSKDILMRVIAQNLPSDSTLAEKVMTPNPECATIDTPIVDALHTMHDGKF 318
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVAT 268
LHLPV+DRDG+VV VVDVIHITHAAVAT
Sbjct: 319 LHLPVLDRDGNVVAVVDVIHITHAAVAT 346
>gi|225456355|ref|XP_002283958.1| PREDICTED: CBS domain-containing protein CBSCBSPB5-like isoform 1
[Vitis vinifera]
Length = 546
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 244/268 (91%), Positives = 255/268 (95%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNP FVLSDTLA
Sbjct: 81 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPIFVLSDTLA 140
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK+
Sbjct: 141 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKN 200
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WGTS+SGP+TFIETLRERMFRP+LSTIIPE SKVVT+SPTDTVL A KKMLEL+LS AVV
Sbjct: 201 WGTSLSGPSTFIETLRERMFRPALSTIIPENSKVVTVSPTDTVLTAAKKMLELKLSCAVV 260
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
VEN+P+GILTSKDILMRVI+QNL +ST VEKVMTPNPECATIDTPIVDALH MHDGKF
Sbjct: 261 AVENRPKGILTSKDILMRVIAQNLHPESTPVEKVMTPNPECATIDTPIVDALHTMHDGKF 320
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVAT 268
LHLPV+DRDG VV V DVIHITHAAVAT
Sbjct: 321 LHLPVIDRDGGVVAVADVIHITHAAVAT 348
>gi|359491097|ref|XP_003634219.1| PREDICTED: CBS domain-containing protein CBSCBSPB5-like isoform 2
[Vitis vinifera]
gi|297734436|emb|CBI15683.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 244/268 (91%), Positives = 255/268 (95%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNP FVLSDTLA
Sbjct: 76 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPIFVLSDTLA 135
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK+
Sbjct: 136 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKN 195
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WGTS+SGP+TFIETLRERMFRP+LSTIIPE SKVVT+SPTDTVL A KKMLEL+LS AVV
Sbjct: 196 WGTSLSGPSTFIETLRERMFRPALSTIIPENSKVVTVSPTDTVLTAAKKMLELKLSCAVV 255
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
VEN+P+GILTSKDILMRVI+QNL +ST VEKVMTPNPECATIDTPIVDALH MHDGKF
Sbjct: 256 AVENRPKGILTSKDILMRVIAQNLHPESTPVEKVMTPNPECATIDTPIVDALHTMHDGKF 315
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVAT 268
LHLPV+DRDG VV V DVIHITHAAVAT
Sbjct: 316 LHLPVIDRDGGVVAVADVIHITHAAVAT 343
>gi|449440540|ref|XP_004138042.1| PREDICTED: CBS domain-containing protein CBSCBSPB5-like [Cucumis
sativus]
gi|449520507|ref|XP_004167275.1| PREDICTED: CBS domain-containing protein CBSCBSPB5-like [Cucumis
sativus]
Length = 540
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/268 (91%), Positives = 257/268 (95%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDALLLTDSNALLCGILTDKDIATRVIA +NLEET VSKVMTRNP FVLSDTLA
Sbjct: 76 MAARRVDALLLTDSNALLCGILTDKDIATRVIACGINLEETSVSKVMTRNPVFVLSDTLA 135
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK
Sbjct: 136 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKS 195
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WGTS+SGPNTFIETLRERMFRPSLSTIIPE K+VT+ PT+TVLMATKKMLELR+SSAVV
Sbjct: 196 WGTSVSGPNTFIETLRERMFRPSLSTIIPENLKIVTVPPTETVLMATKKMLELRVSSAVV 255
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
TV++KP+GILTSKDILMR+I+QNLP DSTLVEKVMTPNPECA+IDTPIVDALH MHDGKF
Sbjct: 256 TVDSKPQGILTSKDILMRLIAQNLPPDSTLVEKVMTPNPECASIDTPIVDALHTMHDGKF 315
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVAT 268
LHLPVVDRDG+VV VVDVIHITHAAVAT
Sbjct: 316 LHLPVVDRDGNVVAVVDVIHITHAAVAT 343
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 20 GILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE 79
GILT KDI R+IA+ L + T V KVMT NP DT V+AL M GKF HLPVV+
Sbjct: 263 GILTSKDILMRLIAQNLPPDSTLVEKVMTPNPECASIDTPIVDALHTMHDGKFLHLPVVD 322
Query: 80 -NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSIS-GPNTFIETLR 136
+G V+A++D+ + A+A + + G A+++ ++K W ++++ PN + LR
Sbjct: 323 RDGNVVAVVDVIHITHAAVATVGNTSGVGNEAASSM--MQKFWDSAMALSPNDDDDELR 379
>gi|118484915|gb|ABK94323.1| unknown [Populus trichocarpa]
Length = 541
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 240/268 (89%), Positives = 254/268 (94%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDALLLTDSNALLCGILTDKD+A+RVIA E+NLEETPVSKVMTRNP FVLSDTLA
Sbjct: 76 MAARRVDALLLTDSNALLCGILTDKDLASRVIAPEVNLEETPVSKVMTRNPVFVLSDTLA 135
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK+
Sbjct: 136 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKN 195
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WGTSIS PNTFIETLRERMFRP+LSTIIPE SKVVT+SP++TVL+ TKKMLE R AVV
Sbjct: 196 WGTSISVPNTFIETLRERMFRPALSTIIPENSKVVTVSPSETVLVVTKKMLESRSGCAVV 255
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
TV+ KPRGI TSKDILMRVI+QNLP DSTLVEKVMTPNPECATIDTPIVDALH MHDGKF
Sbjct: 256 TVDEKPRGIFTSKDILMRVIAQNLPPDSTLVEKVMTPNPECATIDTPIVDALHTMHDGKF 315
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVAT 268
LHLPVVDRDG++V V+DVIHITHAAVAT
Sbjct: 316 LHLPVVDRDGNIVAVIDVIHITHAAVAT 343
>gi|224122050|ref|XP_002318739.1| predicted protein [Populus trichocarpa]
gi|222859412|gb|EEE96959.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 240/268 (89%), Positives = 254/268 (94%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDALLLTDSNALLCGILTDKD+A+RVIA E+NLEETPVSKVMTRNP FVLSDTLA
Sbjct: 64 MAARRVDALLLTDSNALLCGILTDKDLASRVIAPEVNLEETPVSKVMTRNPVFVLSDTLA 123
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK+
Sbjct: 124 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKN 183
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WGTSIS PNTFIETLRERMFRP+LSTIIPE SKVVT+SP++TVL+ TKKMLE R AVV
Sbjct: 184 WGTSISVPNTFIETLRERMFRPALSTIIPENSKVVTVSPSETVLVVTKKMLESRSGCAVV 243
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
TV+ KPRGI TSKDILMRVI+QNLP DSTLVEKVMTPNPECATIDTPIVDALH MHDGKF
Sbjct: 244 TVDEKPRGIFTSKDILMRVIAQNLPPDSTLVEKVMTPNPECATIDTPIVDALHTMHDGKF 303
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVAT 268
LHLPVVDRDG++V V+DVIHITHAAVAT
Sbjct: 304 LHLPVVDRDGNIVAVIDVIHITHAAVAT 331
>gi|147863576|emb|CAN79772.1| hypothetical protein VITISV_019408 [Vitis vinifera]
Length = 569
Score = 489 bits (1259), Expect = e-136, Method: Compositional matrix adjust.
Identities = 245/282 (86%), Positives = 259/282 (91%), Gaps = 3/282 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNP FVLSDTLA
Sbjct: 76 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPIFVLSDTLA 135
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK+
Sbjct: 136 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKN 195
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WGTS+SGP+TFIETLRERMFRP+LSTIIPE SKVVT+SPTDTVL A KKMLEL+LS AVV
Sbjct: 196 WGTSLSGPSTFIETLRERMFRPALSTIIPENSKVVTVSPTDTVLTAAKKMLELKLSCAVV 255
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
VEN+P+GILTSKDILMRVI+QNL +ST V VMTPNPECATIDTPIVDALH MHDGKF
Sbjct: 256 AVENRPKGILTSKDILMRVIAQNLHPESTPV--VMTPNPECATIDTPIVDALHTMHDGKF 313
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVAT-EILLDQIMRQQAQ 281
LHLPV+DRDG VV V DVIHITHAAVAT ++ L + Q Q
Sbjct: 314 LHLPVIDRDGGVVAVADVIHITHAAVATVKLCLSKCCSSQQQ 355
>gi|125528914|gb|EAY77028.1| hypothetical protein OsI_04983 [Oryza sativa Indica Group]
gi|125573153|gb|EAZ14668.1| hypothetical protein OsJ_04591 [Oryza sativa Japonica Group]
Length = 497
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 234/268 (87%), Positives = 253/268 (94%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTDSNALLCGILTDKDI TRVIAREL LEETPVSKVMTRNP FVLSDTLA
Sbjct: 31 MAARRVDAVLLTDSNALLCGILTDKDITTRVIARELKLEETPVSKVMTRNPLFVLSDTLA 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH
Sbjct: 91 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 150
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WG S+SGPNTFIETLRERMFRPSLSTII E SKVVT++PTDTVL A+KKMLE+++SSAVV
Sbjct: 151 WGASVSGPNTFIETLRERMFRPSLSTIISENSKVVTVAPTDTVLTASKKMLEVKVSSAVV 210
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
+ENKP GILTS+DILMRVI+QNLP +ST VEKVMT PECAT+DTPI+DALH MHDGKF
Sbjct: 211 AIENKPGGILTSRDILMRVIAQNLPPESTTVEKVMTQTPECATVDTPILDALHTMHDGKF 270
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVAT 268
LHLPV+D+DG+VV VVDV+HITHAA+AT
Sbjct: 271 LHLPVLDKDGNVVTVVDVLHITHAAIAT 298
>gi|357126564|ref|XP_003564957.1| PREDICTED: CBS domain-containing protein CBSCBSPB5-like
[Brachypodium distachyon]
Length = 550
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 231/268 (86%), Positives = 253/268 (94%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTDSNALLCGILTDKDI TRVIAREL LE+TPVSKVMTRNP FVLSDTLA
Sbjct: 85 MAARRVDAVLLTDSNALLCGILTDKDITTRVIARELKLEDTPVSKVMTRNPLFVLSDTLA 144
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH
Sbjct: 145 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 204
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WGT++SGPNTF+ETLRERMFRPSLSTII E SKVVT++PTDTVL A+KKMLEL++SSAVV
Sbjct: 205 WGTAVSGPNTFVETLRERMFRPSLSTIISENSKVVTVAPTDTVLTASKKMLELKVSSAVV 264
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
+ENKP GILTS+DILMRVI+QNLP +ST VEKVMT +PECAT DTPI++ALH MHDGKF
Sbjct: 265 AIENKPGGILTSRDILMRVIAQNLPPESTTVEKVMTQSPECATTDTPILEALHTMHDGKF 324
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVAT 268
LHLPV+D DG+VV V+DV+HITHAA+AT
Sbjct: 325 LHLPVLDSDGNVVTVIDVLHITHAAIAT 352
>gi|326509897|dbj|BAJ87164.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 550
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 230/268 (85%), Positives = 251/268 (93%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTDSNALLCGILTDKDI TRVIAREL LEETPVSKVMTRNP FVL DTLA
Sbjct: 85 MAARRVDAVLLTDSNALLCGILTDKDITTRVIARELKLEETPVSKVMTRNPLFVLGDTLA 144
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQGKFRHLPVV+NGEVIALLDIAKCLYDAIARMERAAEKG+AIAAAVEGVEKH
Sbjct: 145 VEALQKMVQGKFRHLPVVDNGEVIALLDIAKCLYDAIARMERAAEKGRAIAAAVEGVEKH 204
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WGTS+SGPNTF+ETLRERMFRPSL+TII E SKV T++PTDTVL A+KKMLEL++SSAVV
Sbjct: 205 WGTSVSGPNTFVETLRERMFRPSLATIISENSKVATVAPTDTVLTASKKMLELKVSSAVV 264
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
+ENKP GILTS+DILMRVI+QNLP +ST V KVMT +PECATIDTPI++ALH MHDGKF
Sbjct: 265 AIENKPGGILTSRDILMRVIAQNLPPESTTVGKVMTQSPECATIDTPILEALHTMHDGKF 324
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVAT 268
LHLPV+DRDG VV VVDV+HITHAA+AT
Sbjct: 325 LHLPVLDRDGSVVTVVDVLHITHAAIAT 352
>gi|356511510|ref|XP_003524468.1| PREDICTED: CBS domain-containing protein CBSCBSPB5-like [Glycine
max]
Length = 542
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/269 (85%), Positives = 249/269 (92%), Gaps = 1/269 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAAR+VDALLLTDSNALLCGILTDKDIATRVIARE+NLEETPVSKVMTRNP FVLSDT A
Sbjct: 76 MAARKVDALLLTDSNALLCGILTDKDIATRVIAREVNLEETPVSKVMTRNPVFVLSDTRA 135
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQG+FRHLPVVENGEV+A+LDIAKCLYDAIARMERAAEKGKAIAAAVEG+EKH
Sbjct: 136 VEALQKMVQGRFRHLPVVENGEVVAILDIAKCLYDAIARMERAAEKGKAIAAAVEGIEKH 195
Query: 121 WGTSISGPN-TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAV 179
WGTS N TF+ETLRE++F+PSLSTIIPE SKVVT+SPTD+VL TKKMLELR SSAV
Sbjct: 196 WGTSTPASNSTFMETLREQIFKPSLSTIIPENSKVVTVSPTDSVLTTTKKMLELRASSAV 255
Query: 180 VTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGK 239
VT+++KP GILTSKDILMRVI+Q+LP STLVEKVMTPNPEC TIDTPIVDALH MHDGK
Sbjct: 256 VTIDDKPCGILTSKDILMRVIAQSLPPSSTLVEKVMTPNPECGTIDTPIVDALHTMHDGK 315
Query: 240 FLHLPVVDRDGDVVDVVDVIHITHAAVAT 268
FLHLPVV+R G VV VDVIHITHAAVAT
Sbjct: 316 FLHLPVVNRGGIVVATVDVIHITHAAVAT 344
>gi|226495213|ref|NP_001151563.1| CBS domain containing protein [Zea mays]
gi|195647750|gb|ACG43343.1| CBS domain containing protein [Zea mays]
Length = 550
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/268 (84%), Positives = 250/268 (93%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA+RRVDA+LLTDSNALLCGILTDKDI TRVIAREL +EETPVSKVMTRNP FVL+DTLA
Sbjct: 84 MASRRVDAVLLTDSNALLCGILTDKDITTRVIARELKMEETPVSKVMTRNPVFVLADTLA 143
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQGKFRHLPVVENGEVIA+LDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH
Sbjct: 144 VEALQKMVQGKFRHLPVVENGEVIAILDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 203
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WG ++ GPN FIETLRERMFRPSLSTII E KVVT++P+D VL A+KKMLEL++SSAVV
Sbjct: 204 WGAAVPGPNNFIETLRERMFRPSLSTIISENPKVVTVAPSDMVLTASKKMLELKVSSAVV 263
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
+ENKP GILTS+DILMRVI+QNLP +ST VEKVMT +PECAT+DTPI+DALH MHDGKF
Sbjct: 264 AIENKPGGILTSRDILMRVIAQNLPPESTTVEKVMTQSPECATVDTPILDALHTMHDGKF 323
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVAT 268
LHLPV+DRDG+VV VVDV+HITHAA+AT
Sbjct: 324 LHLPVLDRDGNVVTVVDVLHITHAAIAT 351
>gi|224031159|gb|ACN34655.1| unknown [Zea mays]
gi|414878944|tpg|DAA56075.1| TPA: CBS domain containing protein [Zea mays]
Length = 550
Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/268 (84%), Positives = 250/268 (93%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA+RRVDA+LLTDSNALLCGILTDKDI TRVIAREL +EETPVSKVMTRNP FVL+DTLA
Sbjct: 84 MASRRVDAVLLTDSNALLCGILTDKDITTRVIARELKMEETPVSKVMTRNPVFVLADTLA 143
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQGKFRHLPVVENGEVIA+LDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH
Sbjct: 144 VEALQKMVQGKFRHLPVVENGEVIAILDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 203
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WG ++ GPN FIETLRERMFRPSLSTII E KVVT++P+D VL A+KKMLEL++SSAVV
Sbjct: 204 WGAAVPGPNNFIETLRERMFRPSLSTIISENPKVVTVAPSDMVLTASKKMLELKVSSAVV 263
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
+ENKP GILTS+DILMRVI+QNLP +ST VEKVMT +PECAT+DTPI+DALH MHDGKF
Sbjct: 264 AIENKPGGILTSRDILMRVIAQNLPPESTTVEKVMTQSPECATVDTPILDALHTMHDGKF 323
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVAT 268
LHLPV+DRDG+VV VVDV+HITHAA+AT
Sbjct: 324 LHLPVLDRDGNVVTVVDVLHITHAAIAT 351
>gi|413951480|gb|AFW84129.1| hypothetical protein ZEAMMB73_744710 [Zea mays]
Length = 545
Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/268 (84%), Positives = 251/268 (93%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA+RRVDA+LLTDSNALLCGILTDKDI TRVIAREL +EET VSKVMTRNP FVL+DTLA
Sbjct: 82 MASRRVDAVLLTDSNALLCGILTDKDITTRVIARELKMEETLVSKVMTRNPVFVLADTLA 141
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQGKFRHLPVVENGEVIA+LDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH
Sbjct: 142 VEALQKMVQGKFRHLPVVENGEVIAILDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 201
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WGT++SGPN FIETLRERMFRPSLSTII E SKVVT+ P+DTVL A+KKMLEL++SSAVV
Sbjct: 202 WGTAVSGPNNFIETLRERMFRPSLSTIISENSKVVTVVPSDTVLTASKKMLELKMSSAVV 261
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
+E+KP GILTS+DILMRVI+QNLP +ST VEKVMT PECA++DTPI+DALH MHDGKF
Sbjct: 262 AIESKPGGILTSRDILMRVIAQNLPPESTTVEKVMTQCPECASVDTPILDALHTMHDGKF 321
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVAT 268
LHLPV+DRDG+VV VVDV+HITHAA+AT
Sbjct: 322 LHLPVLDRDGNVVTVVDVLHITHAAIAT 349
>gi|242055437|ref|XP_002456864.1| hypothetical protein SORBIDRAFT_03g044210 [Sorghum bicolor]
gi|241928839|gb|EES01984.1| hypothetical protein SORBIDRAFT_03g044210 [Sorghum bicolor]
Length = 547
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 222/268 (82%), Positives = 249/268 (92%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA+RRVDA+LLTDSNALLCGILTDKDI TRVIARE+ +EETPVSKVMTRNP FV +DTLA
Sbjct: 82 MASRRVDAVLLTDSNALLCGILTDKDITTRVIAREMKMEETPVSKVMTRNPVFVHADTLA 141
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQGKFRHLPVVE+GEVIA+LDIAKCLYDAIARMERAAEKGKAIAAA EGVEKH
Sbjct: 142 VEALQKMVQGKFRHLPVVEHGEVIAILDIAKCLYDAIARMERAAEKGKAIAAAAEGVEKH 201
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WG ++SGPN FIETLRERMF+PSLSTII E KVVT++P+DTVL A+KKMLEL++SSAVV
Sbjct: 202 WGAAVSGPNNFIETLRERMFKPSLSTIISENPKVVTVAPSDTVLTASKKMLELKVSSAVV 261
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
+ENKP GILTS+DILMRVI+QNLP +ST VEKVMT +PECAT+D PI+DALH MHDGKF
Sbjct: 262 AIENKPGGILTSRDILMRVIAQNLPPESTTVEKVMTQSPECATVDMPILDALHTMHDGKF 321
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVAT 268
LHLPV+DRDG+VV VVDV+HITHAA+AT
Sbjct: 322 LHLPVLDRDGNVVTVVDVLHITHAAIAT 349
>gi|356527608|ref|XP_003532400.1| PREDICTED: CBS domain-containing protein CBSCBSPB5-like [Glycine
max]
Length = 598
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/269 (84%), Positives = 244/269 (90%), Gaps = 1/269 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAAR+VDALLLTDSNALLCGILTDKDIATRVIARE+NLEET VSKVMTRNP FVLSD LA
Sbjct: 132 MAARKVDALLLTDSNALLCGILTDKDIATRVIAREVNLEETHVSKVMTRNPVFVLSDALA 191
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQG+FRHLPVVENGEV+A+LDIAKCLYDAIARMER AEKGKAIAAAVEG+EKH
Sbjct: 192 VEALQKMVQGRFRHLPVVENGEVVAILDIAKCLYDAIARMERKAEKGKAIAAAVEGIEKH 251
Query: 121 WGTSISGPN-TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAV 179
WGTS G N TF+ETLRE++F+PSLSTIIP+ SKVVT+SPTD+VL TKKMLELR SSAV
Sbjct: 252 WGTSTPGSNSTFMETLREQIFKPSLSTIIPQNSKVVTVSPTDSVLTTTKKMLELRASSAV 311
Query: 180 VTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGK 239
VTV +K GILTSKDILMRVI+Q+LP STLVEKVMTPNPEC TIDTPI+DALH MHDG
Sbjct: 312 VTVGDKLCGILTSKDILMRVIAQSLPPSSTLVEKVMTPNPECGTIDTPIIDALHTMHDGN 371
Query: 240 FLHLPVVDRDGDVVDVVDVIHITHAAVAT 268
FLHL VV+RDG VV VD IHITHAAVAT
Sbjct: 372 FLHLLVVNRDGIVVATVDAIHITHAAVAT 400
>gi|18423173|ref|NP_568736.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
[Arabidopsis thaliana]
gi|22327688|ref|NP_680412.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
[Arabidopsis thaliana]
gi|347662481|sp|P0DH79.1|Y5064_ARATH RecName: Full=CBS domain-containing protein CBSCBSPB5
gi|347662483|sp|Q0WLC7.2|Y5053_ARATH RecName: Full=CBS domain-containing protein CBSCBSPB4
gi|8777387|dbj|BAA96977.1| unnamed protein product [Arabidopsis thaliana]
gi|9758762|dbj|BAB09138.1| unnamed protein product [Arabidopsis thaliana]
gi|332008572|gb|AED95955.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
[Arabidopsis thaliana]
gi|332008588|gb|AED95971.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
[Arabidopsis thaliana]
Length = 548
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/268 (81%), Positives = 246/268 (91%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDALLLTDSNALLCGILTD+DIAT+VIA++LNLEETPVSKVMT+NP FVLSDT+A
Sbjct: 87 MAARRVDALLLTDSNALLCGILTDRDIATKVIAKQLNLEETPVSKVMTKNPVFVLSDTIA 146
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMER+ EKGKAIAAAVEGVEK+
Sbjct: 147 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERSVEKGKAIAAAVEGVEKN 206
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WGTSI+GPNTF+ETLRER+F+PSLSTIIPE +KV+ + +TVL T KM+E + S+A+V
Sbjct: 207 WGTSIAGPNTFMETLRERIFKPSLSTIIPENTKVLKVGLDETVLGVTMKMVEYQSSAAMV 266
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
VENK GILTSKDILMRVISQNLP ++T VEKVMTPNPE AT+D IV+ALHIMH+GKF
Sbjct: 267 MVENKLVGILTSKDILMRVISQNLPQETTTVEKVMTPNPESATVDMAIVEALHIMHNGKF 326
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVAT 268
LHLPV+D+DGDVV V+DVIHITHAAV T
Sbjct: 327 LHLPVLDKDGDVVAVIDVIHITHAAVTT 354
>gi|297795865|ref|XP_002865817.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297311652|gb|EFH42076.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 548
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/268 (81%), Positives = 245/268 (91%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDALLLTDSNALLCGILTD+DIAT+VIA++LNLEETPVSKVMT+NP FVLSDT+A
Sbjct: 87 MAARRVDALLLTDSNALLCGILTDRDIATKVIAKQLNLEETPVSKVMTKNPVFVLSDTIA 146
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMER+ EKGKAIAAAVEGVEK+
Sbjct: 147 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERSVEKGKAIAAAVEGVEKN 206
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WGTSI+GPNTF+ETLRER+F+PSLSTIIPE +KV+ + +TVL T KM+E + S+A+V
Sbjct: 207 WGTSIAGPNTFMETLRERIFKPSLSTIIPENTKVLKVGLDETVLGVTMKMVEYQSSAAMV 266
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
VENK GILTSKDILMRVISQNLP ++T VEKVMT NPE AT+D IVDALHIMH+GKF
Sbjct: 267 MVENKLVGILTSKDILMRVISQNLPQETTTVEKVMTKNPESATVDMAIVDALHIMHNGKF 326
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVAT 268
LHLPV+D+DGDVV V+DVIHITHAAV T
Sbjct: 327 LHLPVLDKDGDVVAVIDVIHITHAAVTT 354
>gi|224136197|ref|XP_002322269.1| predicted protein [Populus trichocarpa]
gi|222869265|gb|EEF06396.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/268 (82%), Positives = 239/268 (89%), Gaps = 12/268 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA RVDALLLTDSN+LLCGILTDKD+ +RVIA ELNLEETPVSKVMTRNP FVLS+TLA
Sbjct: 76 MAAHRVDALLLTDSNSLLCGILTDKDLVSRVIACELNLEETPVSKVMTRNPVFVLSETLA 135
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK+
Sbjct: 136 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKN 195
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WGTSISG NTFIETLRER+FRP++STIIPE SK+VT+SPT+TVL TK MLE S AVV
Sbjct: 196 WGTSISGTNTFIETLRERIFRPAISTIIPENSKIVTVSPTETVLEVTKTMLESSSSCAVV 255
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
T DILMRVI+QNL +STLVEKVMTPNPECATIDTPIVDALH MHDGKF
Sbjct: 256 T------------DILMRVITQNLSPNSTLVEKVMTPNPECATIDTPIVDALHTMHDGKF 303
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVAT 268
LHLPV+DRDG++V V+DVIHITHAAVAT
Sbjct: 304 LHLPVLDRDGNIVAVIDVIHITHAAVAT 331
>gi|356508821|ref|XP_003523152.1| PREDICTED: CBS domain-containing protein CBSCBSPB5-like [Glycine
max]
Length = 523
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/268 (84%), Positives = 245/268 (91%), Gaps = 1/268 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDALLLTDSNALLCGILTDKDIA RVIA+E+NLEETPVSKVMTRNP FVLS+TLA
Sbjct: 67 MAARRVDALLLTDSNALLCGILTDKDIAARVIAKEINLEETPVSKVMTRNPVFVLSETLA 126
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EALQKMVQGKFRHLPVVENGEV+ALLDIAKCL+DAIARMERAAEKGKAIAAAVEGVEKH
Sbjct: 127 AEALQKMVQGKFRHLPVVENGEVLALLDIAKCLHDAIARMERAAEKGKAIAAAVEGVEKH 186
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WGTS S +FIETLRE++F+PSLSTIIPE SK+VT+SPTD+VL TKKM+E R S AVV
Sbjct: 187 WGTSDSN-TSFIETLREQIFKPSLSTIIPENSKLVTVSPTDSVLTTTKKMVEFRASCAVV 245
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
TV +KPRGI TSKDIL+RVI+QNL +ST VEKVMTPNPEC IDTPIVDALH MHDGKF
Sbjct: 246 TVNDKPRGIFTSKDILLRVIAQNLSPESTPVEKVMTPNPECVIIDTPIVDALHTMHDGKF 305
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVAT 268
LHLPVVDRDG VV VVDVIH+THAAVAT
Sbjct: 306 LHLPVVDRDGSVVAVVDVIHVTHAAVAT 333
>gi|15242788|ref|NP_201154.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
[Arabidopsis thaliana]
gi|75262731|sp|Q9FMV3.1|Y5349_ARATH RecName: Full=CBS domain-containing protein CBSCBSPB1
gi|9758290|dbj|BAB08814.1| unnamed protein product [Arabidopsis thaliana]
gi|110737583|dbj|BAF00733.1| hypothetical protein [Arabidopsis thaliana]
gi|332010375|gb|AED97758.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
[Arabidopsis thaliana]
Length = 543
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/251 (80%), Positives = 226/251 (90%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA+RRVDALLLTDSN +LCGILTDKDIATRVI++ELN+EETPVSKVMT+NP FVLS+TLA
Sbjct: 79 MASRRVDALLLTDSNEMLCGILTDKDIATRVISQELNVEETPVSKVMTKNPMFVLSETLA 138
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK
Sbjct: 139 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKS 198
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WGT+ S PNTFIETLR+RMFRPSLSTIIP+ +KV+ +SPTDTVL KKM+E + S AVV
Sbjct: 199 WGTNTSVPNTFIETLRDRMFRPSLSTIIPDDTKVLKVSPTDTVLTVAKKMVEFQSSCAVV 258
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
+E+K RGI TSKDILMRV+++NLP TLVE VMT NPE +DTPIV+ALHIMH+GKF
Sbjct: 259 IIEDKLRGIFTSKDILMRVVAENLPPSETLVETVMTQNPESTIVDTPIVEALHIMHEGKF 318
Query: 241 LHLPVVDRDGD 251
LHLPV D++GD
Sbjct: 319 LHLPVTDKEGD 329
>gi|357465031|ref|XP_003602797.1| Meiotically up-regulated gene 70 protein [Medicago truncatula]
gi|355491845|gb|AES73048.1| Meiotically up-regulated gene 70 protein [Medicago truncatula]
Length = 528
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/269 (79%), Positives = 241/269 (89%), Gaps = 1/269 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDALLLTDSN LLCGILTDKDIAT+V+A E+N E+TPVSKVMTRNP FVLS+TLA
Sbjct: 65 MAARRVDALLLTDSNGLLCGILTDKDIATKVVAEEINPEDTPVSKVMTRNPVFVLSETLA 124
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQGKFRHLPVVENGEV+ALLDIAKCL+DA ARMERAAEKGKAIAAAVEGVEKH
Sbjct: 125 VEALQKMVQGKFRHLPVVENGEVLALLDIAKCLHDATARMERAAEKGKAIAAAVEGVEKH 184
Query: 121 WG-TSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAV 179
WG ++ ++F+E LRE++F+PSLSTII E SK+VT++PTD++L TKKM+EL AV
Sbjct: 185 WGSSNSDSNSSFVEALREKIFKPSLSTIIHENSKMVTVAPTDSILKTTKKMVELHAGCAV 244
Query: 180 VTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGK 239
VTV+ KPRGI+TS+DILMRVI+QNLP ST VEKVMTPNPEC IDTPIVDALH MHDGK
Sbjct: 245 VTVDGKPRGIVTSRDILMRVIAQNLPPASTHVEKVMTPNPECVIIDTPIVDALHTMHDGK 304
Query: 240 FLHLPVVDRDGDVVDVVDVIHITHAAVAT 268
FLHLPVVDRDG VV VVDVIH+THAAVAT
Sbjct: 305 FLHLPVVDRDGIVVAVVDVIHVTHAAVAT 333
>gi|388514175|gb|AFK45149.1| unknown [Medicago truncatula]
Length = 528
Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/269 (79%), Positives = 241/269 (89%), Gaps = 1/269 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDALLLTDSN LLCGILTDKDIAT+V+A E+N E+TPVSKVMTRNP FVLS+TLA
Sbjct: 65 MAARRVDALLLTDSNGLLCGILTDKDIATKVVAEEINPEDTPVSKVMTRNPVFVLSETLA 124
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQGKFRHLPVVENGEV+ALLDIAKCL+DA ARMERAAEKGKAIAAAVEGVEKH
Sbjct: 125 VEALQKMVQGKFRHLPVVENGEVLALLDIAKCLHDATARMERAAEKGKAIAAAVEGVEKH 184
Query: 121 WG-TSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAV 179
WG ++ ++F+E LRE++F+PSLSTII E SK+VT++PTD++L TKKM+EL AV
Sbjct: 185 WGSSNSDSNSSFVEALREKIFKPSLSTIIHENSKMVTVAPTDSILKTTKKMVELHAGCAV 244
Query: 180 VTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGK 239
VTV+ KPRGI+TS+DILMRVI+QNLP ST VEKVMTPNPEC IDTPIVDALH MHDGK
Sbjct: 245 VTVDGKPRGIVTSRDILMRVIAQNLPPASTHVEKVMTPNPECVIIDTPIVDALHTMHDGK 304
Query: 240 FLHLPVVDRDGDVVDVVDVIHITHAAVAT 268
FLHLPV+DRDG VV VVDVIH+THAAVAT
Sbjct: 305 FLHLPVIDRDGIVVAVVDVIHVTHAAVAT 333
>gi|297797347|ref|XP_002866558.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297312393|gb|EFH42817.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 544
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/251 (79%), Positives = 224/251 (89%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA+RRVDALLLTDSN +LCGILTDKDIATRVI++E+N+EETPVSKVMT+NP FVLS+TLA
Sbjct: 80 MASRRVDALLLTDSNEMLCGILTDKDIATRVISQEVNVEETPVSKVMTKNPMFVLSETLA 139
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK
Sbjct: 140 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKS 199
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WGT+ S PNTFIETLR+RMFRPSLSTIIP +KV+ +SPTDTVL KKM+E + S AVV
Sbjct: 200 WGTNTSVPNTFIETLRDRMFRPSLSTIIPADTKVLKVSPTDTVLTVAKKMVEFQSSCAVV 259
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
+E+K RGI TSKDILMRV+++NL TLVE VMT NPE +DTPIV+ALHIMH+GKF
Sbjct: 260 IIEDKLRGIFTSKDILMRVVAENLAPSETLVETVMTQNPESTIVDTPIVEALHIMHEGKF 319
Query: 241 LHLPVVDRDGD 251
LHLPV D++GD
Sbjct: 320 LHLPVTDKEGD 330
>gi|302783404|ref|XP_002973475.1| hypothetical protein SELMODRAFT_149040 [Selaginella moellendorffii]
gi|300159228|gb|EFJ25849.1| hypothetical protein SELMODRAFT_149040 [Selaginella moellendorffii]
Length = 545
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/268 (70%), Positives = 229/268 (85%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RRVDA LLTDS A+LCGI+TDKD+ATRVIA L +ET VSKVMT+NP FV+SD LA
Sbjct: 67 MVTRRVDAALLTDSTAMLCGIITDKDVATRVIAENLRPDETLVSKVMTKNPVFVMSDALA 126
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
V+ALQKMVQGKFRHLPVVENGEVIALLDI KCLYDAIARME+AAEKG AIAAAV+ VE+
Sbjct: 127 VDALQKMVQGKFRHLPVVENGEVIALLDITKCLYDAIARMEKAAEKGNAIAAAVQDVERQ 186
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WG +++ +TFI+TLRERMFRP+LST+I E +KV T+SP+DTVL AT+KM E R++S ++
Sbjct: 187 WGNTLNSSSTFIDTLRERMFRPTLSTLINENTKVATVSPSDTVLTATRKMREFRVNSVII 246
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
T+ NKP+GILTSKD+LMRV++ NL DST V+KVMTPNPEC T++T IVDALH MHDGKF
Sbjct: 247 TINNKPQGILTSKDVLMRVVASNLAPDSTTVDKVMTPNPECVTLETTIVDALHTMHDGKF 306
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVAT 268
LHLPVVD++ +V +DV+ +TH AVAT
Sbjct: 307 LHLPVVDQENCIVACLDVLQLTHGAVAT 334
>gi|302809978|ref|XP_002986681.1| hypothetical protein SELMODRAFT_446714 [Selaginella moellendorffii]
gi|300145569|gb|EFJ12244.1| hypothetical protein SELMODRAFT_446714 [Selaginella moellendorffii]
Length = 545
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/268 (70%), Positives = 229/268 (85%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RRVDA LLTDS A+LCGI+TDKD+ATRVIA L +ET VSKVMT+NP FV+SD LA
Sbjct: 67 MVTRRVDAALLTDSTAMLCGIITDKDVATRVIAENLRPDETLVSKVMTKNPVFVISDALA 126
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
V+ALQKMVQGKFRHLPVVENGEVIALLDI KCLYDAIARME+AAEKG AIAAAV+ VE+
Sbjct: 127 VDALQKMVQGKFRHLPVVENGEVIALLDITKCLYDAIARMEKAAEKGNAIAAAVQDVERQ 186
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WG +++ +TFI+TLRERMFRP+LST+I E +KV T+SP+DTVL AT+KM E R++S ++
Sbjct: 187 WGNTLNSSSTFIDTLRERMFRPTLSTLINENTKVATVSPSDTVLTATRKMREFRVNSVII 246
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
T+ NKP+GILTSKD+LMRV++ NL DST V+KVMTPNPEC T++T IVDALH MHDGKF
Sbjct: 247 TINNKPQGILTSKDVLMRVVASNLAPDSTTVDKVMTPNPECVTLETTIVDALHTMHDGKF 306
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVAT 268
LHLPVVD++ +V +DV+ +TH AVAT
Sbjct: 307 LHLPVVDQENCIVACLDVLQLTHGAVAT 334
>gi|449457321|ref|XP_004146397.1| PREDICTED: CBS domain-containing protein CBSCBSPB3-like [Cucumis
sativus]
Length = 539
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/267 (72%), Positives = 228/267 (85%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTD+NALL GILTDKD+ATRVIA L E+T VSK+MTRNP FV SD+LA
Sbjct: 82 MAARRVDAVLLTDANALLSGILTDKDVATRVIAEGLRPEQTVVSKIMTRNPIFVTSDSLA 141
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVVENGEVIALLDI KCLYDAI+RME+AAE+G AIAAAVEGVE+
Sbjct: 142 MEALQKMVQGKFRHLPVVENGEVIALLDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQ 201
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WG+ S P FIETLRERMF+PSLSTI+ E +K +S +D + +A KKM ELR++S V+
Sbjct: 202 WGSDFSAPYAFIETLRERMFKPSLSTILSENTKAAIVSASDPIYVAAKKMRELRVNSVVI 261
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
T+ K +GILTSKDILMRV++ NL + TLVEKVMTPNPECAT++T I+DALHIMHDGKF
Sbjct: 262 TMGTKIQGILTSKDILMRVVAHNLSPELTLVEKVMTPNPECATVETTILDALHIMHDGKF 321
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVA 267
LHLPV+DR+G VV VDV+ ITHAA++
Sbjct: 322 LHLPVLDREGLVVACVDVLQITHAAIS 348
>gi|296082621|emb|CBI21626.3| unnamed protein product [Vitis vinifera]
Length = 556
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/267 (71%), Positives = 230/267 (86%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTDSNALL GI+TDKDIATRVIA EL E+T VSK+MTR+P FV SD+LA
Sbjct: 94 MAARRVDAVLLTDSNALLSGIVTDKDIATRVIAEELRPEQTVVSKIMTRHPIFVNSDSLA 153
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EAL+KMVQGKFRHLPVVENGEVIA+LDI KCLYDAI+RME+AAE G AIAAAVEGVE+
Sbjct: 154 IEALEKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEHGSAIAAAVEGVERQ 213
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WG++ + P +FIETLRERMF+P+LSTII E +KV +SP+D + +A KKM E R++S ++
Sbjct: 214 WGSNFTAPYSFIETLRERMFKPALSTIIAENTKVAIVSPSDPISVAAKKMREYRVNSVII 273
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
+K +GILTSKDILMRV++QNL + TLVEKVMTPNPECAT++T I+DALHIMHDGKF
Sbjct: 274 MTGSKIQGILTSKDILMRVVAQNLSPELTLVEKVMTPNPECATLETTILDALHIMHDGKF 333
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVA 267
LHLPVVD+DG + VDV+ ITHAA++
Sbjct: 334 LHLPVVDKDGGIAACVDVLQITHAAIS 360
>gi|225438337|ref|XP_002272502.1| PREDICTED: CBS domain-containing protein CBSCBSPB3-like [Vitis
vinifera]
Length = 539
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/267 (71%), Positives = 230/267 (86%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTDSNALL GI+TDKDIATRVIA EL E+T VSK+MTR+P FV SD+LA
Sbjct: 77 MAARRVDAVLLTDSNALLSGIVTDKDIATRVIAEELRPEQTVVSKIMTRHPIFVNSDSLA 136
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EAL+KMVQGKFRHLPVVENGEVIA+LDI KCLYDAI+RME+AAE G AIAAAVEGVE+
Sbjct: 137 IEALEKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEHGSAIAAAVEGVERQ 196
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WG++ + P +FIETLRERMF+P+LSTII E +KV +SP+D + +A KKM E R++S ++
Sbjct: 197 WGSNFTAPYSFIETLRERMFKPALSTIIAENTKVAIVSPSDPISVAAKKMREYRVNSVII 256
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
+K +GILTSKDILMRV++QNL + TLVEKVMTPNPECAT++T I+DALHIMHDGKF
Sbjct: 257 MTGSKIQGILTSKDILMRVVAQNLSPELTLVEKVMTPNPECATLETTILDALHIMHDGKF 316
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVA 267
LHLPVVD+DG + VDV+ ITHAA++
Sbjct: 317 LHLPVVDKDGGIAACVDVLQITHAAIS 343
>gi|449519605|ref|XP_004166825.1| PREDICTED: LOW QUALITY PROTEIN: CBS domain-containing protein
CBSCBSPB3-like [Cucumis sativus]
Length = 539
Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/267 (71%), Positives = 228/267 (85%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTD+NALL GILTDKD+ATRVIA L E+T VSK+MTRNP FV SD+LA
Sbjct: 82 MAARRVDAVLLTDANALLSGILTDKDVATRVIAEGLRPEQTVVSKIMTRNPIFVTSDSLA 141
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVVENGEVIALLDI KCLYDAI+RME+AAE+G AIAAAVEGVE+
Sbjct: 142 MEALQKMVQGKFRHLPVVENGEVIALLDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQ 201
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WG+ S P FIETLRERMF+PSLSTI+ E +K +S +D + +A +KM ELR++S V+
Sbjct: 202 WGSDFSAPYAFIETLRERMFKPSLSTILSENTKAAIVSASDPIYVAXQKMRELRVNSVVI 261
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
T+ K +GILTSKDILMRV++ NL + TLVEKVMTPNPECAT++T I+DALHIMHDGKF
Sbjct: 262 TMGTKIQGILTSKDILMRVVAHNLSPELTLVEKVMTPNPECATVETTILDALHIMHDGKF 321
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVA 267
LHLPV+DR+G VV VDV+ ITHAA++
Sbjct: 322 LHLPVLDREGLVVACVDVLQITHAAIS 348
>gi|297816584|ref|XP_002876175.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297322013|gb|EFH52434.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 556
Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/267 (71%), Positives = 228/267 (85%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA LLTDS+ALL GI+TDKD+ATRVIA L ++T VSKVMTRNP FV SD+LA
Sbjct: 88 MAARRVDACLLTDSSALLSGIVTDKDVATRVIAEGLRPDQTLVSKVMTRNPIFVTSDSLA 147
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVVENGEVIALLDI KCLYDAI+RME+AAE+G A+AAAVEGVEK
Sbjct: 148 LEALQKMVQGKFRHLPVVENGEVIALLDITKCLYDAISRMEKAAEQGSALAAAVEGVEKQ 207
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WG+ S P FIETLRERMF+P+LSTII E SKV ++P+D V +A K+M +LR++S ++
Sbjct: 208 WGSGYSAPYAFIETLRERMFKPALSTIITENSKVALVAPSDPVSVAAKRMRDLRVNSVII 267
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
+ NK GILTSKDILMRV++QNLP + TLVEKVMTPNPECA+++T I+DALHIMHDGKF
Sbjct: 268 SNGNKIHGILTSKDILMRVVAQNLPPELTLVEKVMTPNPECASLETTILDALHIMHDGKF 327
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVA 267
LHLP++D+DG VDV+ ITHAA++
Sbjct: 328 LHLPIIDKDGSAAACVDVLQITHAAIS 354
>gi|224093670|ref|XP_002309952.1| predicted protein [Populus trichocarpa]
gi|222852855|gb|EEE90402.1| predicted protein [Populus trichocarpa]
Length = 488
Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/267 (71%), Positives = 228/267 (85%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRV+A LLTD+NALL GI+TDKDI+ RVIA L ++T VSK+MTRNP FV SD+LA
Sbjct: 29 MAARRVNAALLTDANALLSGIVTDKDISARVIAEGLRPDQTIVSKIMTRNPIFVNSDSLA 88
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVVENGEVIALLDI KCLYDAI+RME+AAE+G AIAAAVEGVE+
Sbjct: 89 IEALQKMVQGKFRHLPVVENGEVIALLDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQ 148
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WG + + P+TFIETLRERMF+PSLSTII E++KV SP+D V +A KKM ELR++SA+V
Sbjct: 149 WGNNFTAPHTFIETLRERMFKPSLSTIIGEQTKVAVASPSDPVYVAAKKMRELRVNSAIV 208
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
NK +GILTSKDILMRV++QNL + TLVEKVMTPNPEC T++T ++DALH+MHDGKF
Sbjct: 209 VTGNKIQGILTSKDILMRVVAQNLSPELTLVEKVMTPNPECVTLETTVLDALHVMHDGKF 268
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVA 267
LHLPV+D+DG VDV+ ITHAA++
Sbjct: 269 LHLPVLDKDGSAAACVDVLQITHAAIS 295
>gi|224081072|ref|XP_002306285.1| predicted protein [Populus trichocarpa]
gi|222855734|gb|EEE93281.1| predicted protein [Populus trichocarpa]
Length = 348
Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/267 (71%), Positives = 225/267 (84%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRV+A+LLTD+NALL GI+TDKDI+ RVIA L E T VSK+MTRNP FV SD+LA
Sbjct: 1 MAARRVNAVLLTDANALLSGIVTDKDISARVIAEGLRPEHTIVSKIMTRNPIFVTSDSLA 60
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVVENGEVIALLDI +CLYDAI+RME+AAE+G AIAAAVEGVE+
Sbjct: 61 IEALQKMVQGKFRHLPVVENGEVIALLDITRCLYDAISRMEKAAEQGSAIAAAVEGVERQ 120
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WG + + P FIETLRERMF+PSLSTII E+SKV SP+D V ATKKM ELR++S +V
Sbjct: 121 WGNNFTAPYAFIETLRERMFKPSLSTIIGEQSKVAIASPSDPVYAATKKMRELRVNSVIV 180
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
NK +GILTSKDILMRV++QNL + TLVEKVMT NPEC T++T I+DALH+MHDGKF
Sbjct: 181 VTGNKIQGILTSKDILMRVVAQNLSPELTLVEKVMTLNPECVTLETTILDALHVMHDGKF 240
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVA 267
LHLPVVD+DG V +DV+ ITHAA++
Sbjct: 241 LHLPVVDKDGSVAACLDVLQITHAAIS 267
>gi|118489093|gb|ABK96353.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 555
Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/267 (71%), Positives = 225/267 (84%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRV+A+LLTD+NALL GI+TDKDI+ RVIA L E T VSK+MTRNP FV SD+LA
Sbjct: 94 MAARRVNAVLLTDANALLSGIVTDKDISARVIAEGLRPEHTIVSKIMTRNPIFVTSDSLA 153
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVVENGEVIALLDI +CLYDAI+RME+AAE+G AIAAAVEGVE+
Sbjct: 154 IEALQKMVQGKFRHLPVVENGEVIALLDITRCLYDAISRMEKAAEQGSAIAAAVEGVERQ 213
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WG + + P FIETLRERMF+PSLSTII E+SKV SP+D V ATKKM ELR++S +V
Sbjct: 214 WGNNFTAPYAFIETLRERMFKPSLSTIIGEQSKVAIASPSDPVYAATKKMRELRVNSVIV 273
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
NK +GILTSKDILMRV++QNL + TLVEKVMT NPEC T++T I+DALH+MHDGKF
Sbjct: 274 VTGNKIQGILTSKDILMRVVAQNLSPELTLVEKVMTLNPECVTLETTILDALHVMHDGKF 333
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVA 267
LHLPVVD+DG V +DV+ ITHAA++
Sbjct: 334 LHLPVVDKDGSVAACLDVLQITHAAIS 360
>gi|22136010|gb|AAM91587.1| putative protein [Arabidopsis thaliana]
gi|23197824|gb|AAN15439.1| putative protein [Arabidopsis thaliana]
Length = 469
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/267 (70%), Positives = 226/267 (84%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA LLTDS+ALL GI+TDKD+ATRVIA L ++T VSKVMTRNP FV SD+LA
Sbjct: 1 MAARRVDACLLTDSSALLSGIVTDKDVATRVIAEGLRPDQTLVSKVMTRNPIFVTSDSLA 60
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVVENGEVIALLDI KCLYDAI+RME+AAE+G A+AAAVEGVEK
Sbjct: 61 LEALQKMVQGKFRHLPVVENGEVIALLDITKCLYDAISRMEKAAEQGSALAAAVEGVEKQ 120
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WG+ S P FIETLRERMF+P+LSTII + SKV ++P+D V +A K+M +LR++S ++
Sbjct: 121 WGSGYSAPYAFIETLRERMFKPALSTIITDNSKVALVAPSDPVSVAAKRMRDLRVNSVII 180
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
+ NK GILTSKDILMRV++QNL + TLVEKVMTPNPECA+++T I+DALH MHDGKF
Sbjct: 181 STGNKISGILTSKDILMRVVAQNLSPELTLVEKVMTPNPECASLETTILDALHTMHDGKF 240
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVA 267
LHLP++D+DG VDV+ ITHAA++
Sbjct: 241 LHLPIIDKDGSAAACVDVLQITHAAIS 267
>gi|42565877|ref|NP_190863.3| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
[Arabidopsis thaliana]
gi|334185937|ref|NP_001190074.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
[Arabidopsis thaliana]
gi|75263848|sp|Q9LF97.1|Y3295_ARATH RecName: Full=CBS domain-containing protein CBSCBSPB3
gi|7529719|emb|CAB86899.1| putative protein [Arabidopsis thaliana]
gi|332645495|gb|AEE79016.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
[Arabidopsis thaliana]
gi|332645496|gb|AEE79017.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
[Arabidopsis thaliana]
Length = 556
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/267 (70%), Positives = 226/267 (84%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA LLTDS+ALL GI+TDKD+ATRVIA L ++T VSKVMTRNP FV SD+LA
Sbjct: 88 MAARRVDACLLTDSSALLSGIVTDKDVATRVIAEGLRPDQTLVSKVMTRNPIFVTSDSLA 147
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVVENGEVIALLDI KCLYDAI+RME+AAE+G A+AAAVEGVEK
Sbjct: 148 LEALQKMVQGKFRHLPVVENGEVIALLDITKCLYDAISRMEKAAEQGSALAAAVEGVEKQ 207
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WG+ S P FIETLRERMF+P+LSTII + SKV ++P+D V +A K+M +LR++S ++
Sbjct: 208 WGSGYSAPYAFIETLRERMFKPALSTIITDNSKVALVAPSDPVSVAAKRMRDLRVNSVII 267
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
+ NK GILTSKDILMRV++QNL + TLVEKVMTPNPECA+++T I+DALH MHDGKF
Sbjct: 268 STGNKISGILTSKDILMRVVAQNLSPELTLVEKVMTPNPECASLETTILDALHTMHDGKF 327
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVA 267
LHLP++D+DG VDV+ ITHAA++
Sbjct: 328 LHLPIIDKDGSAAACVDVLQITHAAIS 354
>gi|302774691|ref|XP_002970762.1| hypothetical protein SELMODRAFT_94149 [Selaginella moellendorffii]
gi|300161473|gb|EFJ28088.1| hypothetical protein SELMODRAFT_94149 [Selaginella moellendorffii]
Length = 433
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/268 (70%), Positives = 226/268 (84%), Gaps = 1/268 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA RRVDA LLT+S+ALLCGI+TDKD+ATRVIA L E+TPVSKVMTRNPTFV+SD+LA
Sbjct: 28 MANRRVDAALLTNSSALLCGIITDKDVATRVIAEGLRPEDTPVSKVMTRNPTFVMSDSLA 87
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
V+ALQKMVQGKFRHLPVV+NGEVIALLDI KCLYDAI RMER+A KG AIAAAVE VE+
Sbjct: 88 VDALQKMVQGKFRHLPVVDNGEVIALLDITKCLYDAIVRMERSALKGNAIAAAVEDVERQ 147
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WG + SG + F+ETL+ERMFRP+L T++ E +KV T++P D+V ATKKM EL+++S VV
Sbjct: 148 WGNTFSGQSNFVETLKERMFRPTLGTLVNENTKVATVAPGDSVFTATKKMRELKVNSVVV 207
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
TV NKP GILTSKD+LMRV++ + AD VEK+MT NPECA ++ IVDALH MHDGKF
Sbjct: 208 TVGNKPVGILTSKDVLMRVVAVGVAAD-IPVEKIMTTNPECANLEMTIVDALHTMHDGKF 266
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVAT 268
LHLPV+++DG VV VDV+HITH+A AT
Sbjct: 267 LHLPVINKDGHVVSCVDVLHITHSAFAT 294
>gi|302772022|ref|XP_002969429.1| hypothetical protein SELMODRAFT_62607 [Selaginella moellendorffii]
gi|300162905|gb|EFJ29517.1| hypothetical protein SELMODRAFT_62607 [Selaginella moellendorffii]
Length = 426
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/268 (70%), Positives = 226/268 (84%), Gaps = 1/268 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA RRVDA LLT+S+ALLCGI+TDKD+ATRVIA L E+TPVSKVMTRNPTFV+SD+LA
Sbjct: 28 MANRRVDAALLTNSSALLCGIITDKDVATRVIAEGLRPEDTPVSKVMTRNPTFVMSDSLA 87
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
V+ALQKMVQGKFRHLPVV+NGEVIALLDI KCLYDAI RMER+A KG AIAAAVE VE+
Sbjct: 88 VDALQKMVQGKFRHLPVVDNGEVIALLDITKCLYDAIVRMERSALKGNAIAAAVEDVERQ 147
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WG + SG + F+ETL+ERMFRP+L T++ E +KV T++P D+V ATKKM EL+++S VV
Sbjct: 148 WGNTFSGQSNFVETLKERMFRPTLGTLVNENTKVATVAPGDSVFTATKKMRELKVNSVVV 207
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
TV NKP GILTSKD+LMRV++ + AD VEK+MT NPECA ++ IVDALH MHDGKF
Sbjct: 208 TVGNKPVGILTSKDVLMRVVAVGVAAD-IPVEKIMTTNPECANLEMTIVDALHTMHDGKF 266
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVAT 268
LHLPV+++DG VV VDV+HITH+A AT
Sbjct: 267 LHLPVINKDGHVVSCVDVLHITHSAFAT 294
>gi|168028312|ref|XP_001766672.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682104|gb|EDQ68525.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 570
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/269 (70%), Positives = 224/269 (83%), Gaps = 1/269 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA RRVDA LL DS+ALLCGI+TDKD+ATRVIA L E+T VSKVMT+NP FV+ DTLA
Sbjct: 93 MATRRVDAALLVDSSALLCGIITDKDVATRVIAEGLRPEDTSVSKVMTKNPVFVMGDTLA 152
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQGKFRHLPVVENGEV+ALLDI KCLYDAIARMERAAEKG AIAAAVE VE+
Sbjct: 153 VEALQKMVQGKFRHLPVVENGEVVALLDITKCLYDAIARMERAAEKGNAIAAAVESVERE 212
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSA-V 179
WG + + ++FIE LR++MFRP+L +IIPE +KV T S ++TV ATKKM E R++S +
Sbjct: 213 WGNNATEKSSFIENLRDKMFRPTLGSIIPEGTKVPTCSASETVTAATKKMKENRMNSVII 272
Query: 180 VTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGK 239
V+ NKP GILTSKD+LMRV++Q LP ++T ++KVMTPNPECA +DT +VDALH MHDGK
Sbjct: 273 VSPSNKPTGILTSKDVLMRVVAQGLPPETTTLDKVMTPNPECAGLDTTLVDALHTMHDGK 332
Query: 240 FLHLPVVDRDGDVVDVVDVIHITHAAVAT 268
FLHLPV DRDG +V VDV+ +TH AVAT
Sbjct: 333 FLHLPVTDRDGHIVACVDVLQLTHGAVAT 361
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 71/127 (55%), Gaps = 1/127 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M R++++++ + GILT KD+ RV+A+ L E T + KVMT NP DT
Sbjct: 262 MKENRMNSVIIVSPSNKPTGILTSKDVLMRVVAQGLPPETTTLDKVMTPNPECAGLDTTL 321
Query: 61 VEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
V+AL M GKF HLPV + +G ++A +D+ + + A+A + + G A ++K
Sbjct: 322 VDALHTMHDGKFLHLPVTDRDGHIVACVDVLQLTHGAVATVGGGSAAGGGADQATNMLQK 381
Query: 120 HWGTSIS 126
W ++++
Sbjct: 382 FWDSALA 388
>gi|168034755|ref|XP_001769877.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678783|gb|EDQ65237.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 524
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/264 (70%), Positives = 221/264 (83%), Gaps = 1/264 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA RRVDA LL DS+ALLCGI+TDKD+ATRVIA L EET VSKVMT+NP FV+ DTLA
Sbjct: 29 MATRRVDAALLVDSSALLCGIITDKDVATRVIAEGLRPEETLVSKVMTKNPVFVMGDTLA 88
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQGKFRHLPVVE GEV+ALLDI KCLYDAIARMERAAEKG AIAAAVE VE+
Sbjct: 89 VEALQKMVQGKFRHLPVVEKGEVVALLDITKCLYDAIARMERAAEKGNAIAAAVESVERE 148
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WG + S ++FIE LR++MFRP+L +IIPE SKV T SP++TV AT+KM E R++S ++
Sbjct: 149 WGNNASDKSSFIENLRDKMFRPTLGSIIPEGSKVPTCSPSETVSAATRKMKEYRMNSVII 208
Query: 181 T-VENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGK 239
T + NKP GILTSKD+LMRV++Q LP ++T ++KVMTPNPECA +DT +VDALH MHDGK
Sbjct: 209 TSLSNKPSGILTSKDVLMRVVAQGLPPETTTLDKVMTPNPECAGLDTTLVDALHTMHDGK 268
Query: 240 FLHLPVVDRDGDVVDVVDVIHITH 263
FLHLPV DRDG +V VDV+ +TH
Sbjct: 269 FLHLPVTDRDGYIVACVDVLQLTH 292
>gi|255574194|ref|XP_002528012.1| conserved hypothetical protein [Ricinus communis]
gi|223532581|gb|EEF34368.1| conserved hypothetical protein [Ricinus communis]
Length = 546
Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/267 (69%), Positives = 225/267 (84%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTD+NALL GI+TDKDI+ RVIA L E+T VSK+MTRNP FV SD+LA
Sbjct: 85 MAARRVDAVLLTDANALLSGIVTDKDISARVIAEGLRPEQTIVSKIMTRNPIFVASDSLA 144
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
++ALQKMVQGKFRHLPVVENGEVIALLDI KCLYDAI+RME+ AE+G AIAAAVEGVE+
Sbjct: 145 IDALQKMVQGKFRHLPVVENGEVIALLDITKCLYDAISRMEKVAEQGSAIAAAVEGVERQ 204
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WG++ S P FIETLRERMF+PSLSTII E++KV SP+D V +A K+M +L+++S ++
Sbjct: 205 WGSNFSAPYAFIETLRERMFKPSLSTIIGEQTKVAIASPSDPVYVAAKRMRDLQVNSVII 264
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
NK +GILTSKDILMRV++ N+ + TLVEKVMT NPECAT++T I+DALHIMHDGKF
Sbjct: 265 VTGNKIQGILTSKDILMRVVAHNISPELTLVEKVMTSNPECATLETTILDALHIMHDGKF 324
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVA 267
LHLPVVD+DG VDV+ ITHAA++
Sbjct: 325 LHLPVVDKDGSATACVDVLQITHAAIS 351
>gi|326523955|dbj|BAJ96988.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 553
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/266 (68%), Positives = 226/266 (84%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTD+ LL GI+TDKDI+TRVIA L +E+T +SK+MTRNPT+V +D+LA
Sbjct: 90 MAARRVDAVLLTDAQGLLSGIVTDKDISTRVIAEGLRVEQTIMSKIMTRNPTYVSADSLA 149
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVVENGEV+A+LDIAKCLYDAIAR+E+AAE+G AIAAAVEGVE+
Sbjct: 150 IEALQKMVQGKFRHLPVVENGEVMAMLDIAKCLYDAIARLEKAAEQGSAIAAAVEGVERQ 209
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
G + + P FIETLRERMF+PSLSTI+ E +KV ISP+D V +AT+KM E R++S VV
Sbjct: 210 LGGNFTAPYAFIETLRERMFKPSLSTIVTEGTKVAIISPSDPVYVATQKMREFRVNSVVV 269
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
T N +GI TSKD+LMRV+SQNL + TLVEKVMT NP+CAT+DT I+DALHIMHDGKF
Sbjct: 270 TTGNTVQGIFTSKDVLMRVVSQNLSPELTLVEKVMTANPDCATLDTTILDALHIMHDGKF 329
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAV 266
LH+PV+DR+G + +DV+ +THAA+
Sbjct: 330 LHIPVLDREGQIAACLDVLQLTHAAI 355
>gi|28973655|gb|AAO64148.1| unknown protein [Arabidopsis thaliana]
Length = 536
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/268 (71%), Positives = 226/268 (84%), Gaps = 5/268 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTDS+ALL GI+TDKDIATRVIA L E TPVSKVMTRNP FV SD+LA
Sbjct: 86 MAARRVDAVLLTDSSALLSGIVTDKDIATRVIAEGLRPEHTPVSKVMTRNPIFVTSDSLA 145
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVVENGEVIALLDI KCLYDAI+RME+AAE+G A+A AVE E+H
Sbjct: 146 IEALQKMVQGKFRHLPVVENGEVIALLDITKCLYDAISRMEKAAEQGSALATAVE--ERH 203
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WG SG FI+TLRERMF+P+LSTI+ E +KV +S +D V +A+KKM +LR++S ++
Sbjct: 204 WG---SGNFAFIDTLRERMFKPALSTIVTENTKVALVSASDPVFVASKKMRDLRVNSVII 260
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
V NK GILTSKDILMRV++QNL + TLVEKVMTPNPECA+I+T I+DALHIMHDGKF
Sbjct: 261 AVGNKIHGILTSKDILMRVVAQNLSPELTLVEKVMTPNPECASIETTILDALHIMHDGKF 320
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVAT 268
LHLPV D+DG V +DV+ ITHAA++T
Sbjct: 321 LHLPVFDKDGFAVACLDVLQITHAAIST 348
>gi|356518812|ref|XP_003528071.1| PREDICTED: CBS domain-containing protein CBSCBSPB3-like [Glycine
max]
Length = 525
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/267 (68%), Positives = 228/267 (85%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARR+DA+LLTDSNALL GILTDKD+ATRV+A L EET VSKVMTRNP FV SDTLA
Sbjct: 64 MAARRIDAVLLTDSNALLSGILTDKDVATRVVAEGLKPEETTVSKVMTRNPIFVTSDTLA 123
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
++ALQKM+QG+FRHLPVVENGEVIA+LDI KCLYDAI+RME A ++G A+AAAVEGVE
Sbjct: 124 IDALQKMIQGRFRHLPVVENGEVIAMLDITKCLYDAISRMESATQQGSAVAAAVEGVELQ 183
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
+++S PNTFIETLRER+F+PSLSTI+ E +KV +D V +A KKM EL +++AV+
Sbjct: 184 RTSNVSAPNTFIETLRERVFKPSLSTIVDENTKVAIALVSDPVYVAAKKMRELHVNAAVI 243
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
+ENK +GILTSKDILMRV++QNL +S L+EKVMTPNPECA+++T I+DALH+MH+GKF
Sbjct: 244 VMENKIKGILTSKDILMRVVAQNLSPESALLEKVMTPNPECASLETTILDALHMMHNGKF 303
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVA 267
LHLPVVDRDG+ + +DV+ ITHAA++
Sbjct: 304 LHLPVVDRDGNAIACLDVLQITHAAIS 330
>gi|357160673|ref|XP_003578839.1| PREDICTED: CBS domain-containing protein CBSCBSPB3-like
[Brachypodium distachyon]
Length = 543
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/266 (68%), Positives = 225/266 (84%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA RRVDA+LLTD+ LL GI+TDKDI+TRVIA L +E+T +SK+MTRNPT+V SD+LA
Sbjct: 80 MATRRVDAVLLTDAQGLLSGIVTDKDISTRVIAEGLRVEQTIMSKIMTRNPTYVTSDSLA 139
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVVENGEV+A+LDIAKCLYDAIAR+E+AAE+G AIAAAVEGVE+
Sbjct: 140 IEALQKMVQGKFRHLPVVENGEVMAMLDIAKCLYDAIARLEKAAEQGSAIAAAVEGVERQ 199
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
G + + P FIETLRERMF+PSLSTI+ E +KV +SP+D V +AT++M E R++S VV
Sbjct: 200 LGGNFTAPYAFIETLRERMFKPSLSTIVTEGTKVAIVSPSDPVYVATQQMREFRVNSVVV 259
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
T N +GI TSKD+LMRV+SQNL + TLVEKVMT NP+CAT+DT I+DALHIMHDGKF
Sbjct: 260 TTGNTVQGIFTSKDVLMRVVSQNLSPELTLVEKVMTANPDCATLDTTILDALHIMHDGKF 319
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAV 266
LH+PV+DR+G + +DV+ +THAA+
Sbjct: 320 LHIPVLDREGQIAACLDVLQLTHAAI 345
>gi|15227986|ref|NP_181191.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
[Arabidopsis thaliana]
gi|75265956|sp|Q9SJQ5.1|Y2650_ARATH RecName: Full=CBS domain-containing protein CBSCBSPB2
gi|4581150|gb|AAD24634.1| hypothetical protein [Arabidopsis thaliana]
gi|330254170|gb|AEC09264.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
[Arabidopsis thaliana]
Length = 536
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/268 (70%), Positives = 225/268 (83%), Gaps = 5/268 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTDS+ALL GI+TDKDIATRVIA L E T VSKVMTRNP FV SD+LA
Sbjct: 86 MAARRVDAVLLTDSSALLSGIVTDKDIATRVIAEGLRPEHTLVSKVMTRNPIFVTSDSLA 145
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVVENGEVIALLDI KCLYDAI+RME+AAE+G A+A AVE E+H
Sbjct: 146 IEALQKMVQGKFRHLPVVENGEVIALLDITKCLYDAISRMEKAAEQGSALATAVE--ERH 203
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WG SG FI+TLRERMF+P+LSTI+ E +KV +S +D V +A+KKM +LR++S ++
Sbjct: 204 WG---SGNFAFIDTLRERMFKPALSTIVTENTKVALVSASDPVFVASKKMRDLRVNSVII 260
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
V NK GILTSKDILMRV++QNL + TLVEKVMTPNPECA+I+T I+DALHIMHDGKF
Sbjct: 261 AVGNKIHGILTSKDILMRVVAQNLSPELTLVEKVMTPNPECASIETTILDALHIMHDGKF 320
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVAT 268
LHLPV D+DG V +DV+ ITHAA++T
Sbjct: 321 LHLPVFDKDGFAVACLDVLQITHAAIST 348
>gi|222616703|gb|EEE52835.1| hypothetical protein OsJ_35364 [Oryza sativa Japonica Group]
Length = 543
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/266 (67%), Positives = 224/266 (84%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTD+ LL GI+TDKD+ATRV+A L +E+T +SK+MTRNPT+ +SDTLA
Sbjct: 80 MAARRVDAVLLTDAQGLLSGIVTDKDVATRVVAEGLRVEQTIMSKIMTRNPTYAMSDTLA 139
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVVENGEVIA+LDIAKCLYDAI+R+E+AAE+G AIAAAVEGVE+
Sbjct: 140 IEALQKMVQGKFRHLPVVENGEVIAMLDIAKCLYDAISRLEKAAEQGSAIAAAVEGVERQ 199
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
G + S P FIETLRERMF+PSLSTI+ E +KV +SP+D V +AT+KM E R++S VV
Sbjct: 200 LGGNFSAPYAFIETLRERMFKPSLSTIVTEGTKVAIVSPSDPVYVATQKMREFRVNSVVV 259
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
N +GI TSKD+LMRV++QNL + TLVEKVMT NP+ AT+DT I+DALHIMHDGKF
Sbjct: 260 ATGNTLQGIFTSKDLLMRVVAQNLSPELTLVEKVMTVNPDFATLDTTILDALHIMHDGKF 319
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAV 266
LH+PV+DR+G + +DV+ +THAA+
Sbjct: 320 LHIPVLDREGQIAACLDVLQLTHAAI 345
>gi|297612744|ref|NP_001066263.2| Os12g0169400 [Oryza sativa Japonica Group]
gi|77553133|gb|ABA95929.1| CBS domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|255670087|dbj|BAF29282.2| Os12g0169400 [Oryza sativa Japonica Group]
Length = 542
Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/266 (67%), Positives = 224/266 (84%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTD+ LL GI+TDKD+ATRV+A L +E+T +SK+MTRNPT+ +SDTLA
Sbjct: 80 MAARRVDAVLLTDAQGLLSGIVTDKDVATRVVAEGLRVEQTIMSKIMTRNPTYAMSDTLA 139
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVVENGEVIA+LDIAKCLYDAI+R+E+AAE+G AIAAAVEGVE+
Sbjct: 140 IEALQKMVQGKFRHLPVVENGEVIAMLDIAKCLYDAISRLEKAAEQGSAIAAAVEGVERQ 199
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
G + S P FIETLRERMF+PSLSTI+ E +KV +SP+D V +AT+KM E R++S VV
Sbjct: 200 LGGNFSAPYAFIETLRERMFKPSLSTIVTEGTKVAIVSPSDPVYVATQKMREFRVNSVVV 259
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
N +GI TSKD+LMRV++QNL + TLVEKVMT NP+ AT+DT I+DALHIMHDGKF
Sbjct: 260 ATGNTLQGIFTSKDLLMRVVAQNLSPELTLVEKVMTVNPDFATLDTTILDALHIMHDGKF 319
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAV 266
LH+PV+DR+G + +DV+ +THAA+
Sbjct: 320 LHIPVLDREGQIAACLDVLQLTHAAI 345
>gi|357464823|ref|XP_003602693.1| Octicosapeptide/Phox/Bem1p domain-containing protein [Medicago
truncatula]
gi|355491741|gb|AES72944.1| Octicosapeptide/Phox/Bem1p domain-containing protein [Medicago
truncatula]
Length = 519
Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/268 (70%), Positives = 228/268 (85%), Gaps = 6/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTDS+ALL GILTDKD+ATRV+A L+ +ET VSKVMTRNP FV SDTLA
Sbjct: 62 MAARRVDAVLLTDSSALLSGILTDKDVATRVVAEGLSPDETHVSKVMTRNPIFVTSDTLA 121
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA-VEGVEK 119
++ALQKM+QGKFRHLPVVENGEVIA+LDI KCLYDAIAR+E+A+++G AIAAA VEGVE
Sbjct: 122 IDALQKMIQGKFRHLPVVENGEVIAILDITKCLYDAIARVEKASQQGSAIAAAAVEGVEH 181
Query: 120 HWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAV 179
PN FI+TLRERMF+PSLSTI+ E +KV S +D V +A K+M ELR+SS+V
Sbjct: 182 QRA-----PNAFIDTLRERMFKPSLSTILGENTKVAITSASDPVHVAAKRMQELRVSSSV 236
Query: 180 VTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGK 239
+ ENK +GILTSKDILMRV++ NL +STLVEKVMTPNP+CAT++T I+DALH+MHDGK
Sbjct: 237 IVTENKIQGILTSKDILMRVMAPNLSPESTLVEKVMTPNPQCATLETTIIDALHMMHDGK 296
Query: 240 FLHLPVVDRDGDVVDVVDVIHITHAAVA 267
FLHLPVVD+DG+VV VDV+ ITHAA++
Sbjct: 297 FLHLPVVDKDGNVVACVDVLQITHAAIS 324
>gi|297823463|ref|XP_002879614.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297325453|gb|EFH55873.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 536
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/268 (70%), Positives = 226/268 (84%), Gaps = 5/268 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTDS+ALL GI+TDKDIATRVIA L E T VSKVMTRNP FV SD+LA
Sbjct: 86 MAARRVDAVLLTDSSALLSGIVTDKDIATRVIAEGLRPEHTLVSKVMTRNPIFVTSDSLA 145
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVVENGEVIALLDI KCLYDAI+RME+AAE+G A+A AVE E+H
Sbjct: 146 IEALQKMVQGKFRHLPVVENGEVIALLDITKCLYDAISRMEKAAEQGSALATAVE--ERH 203
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WG SG FI+TLRERMF+P+LSTI+ E +KV +S +D V +A+K+M +LR++S ++
Sbjct: 204 WG---SGNFAFIDTLRERMFKPALSTIVTENTKVALVSASDPVFVASKRMRDLRVNSVII 260
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
V NK GILTSKDILMRV++QNL + TLVEKVMTPNPECA+I+T I+DALHIMHDGKF
Sbjct: 261 AVGNKIHGILTSKDILMRVVAQNLSPELTLVEKVMTPNPECASIETTILDALHIMHDGKF 320
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVAT 268
LHLPV+D+DG V +DV+ ITHAA++T
Sbjct: 321 LHLPVLDKDGFAVACLDVLQITHAAIST 348
>gi|357520151|ref|XP_003630364.1| Meiotically up-regulated gene 70 protein [Medicago truncatula]
gi|355524386|gb|AET04840.1| Meiotically up-regulated gene 70 protein [Medicago truncatula]
Length = 534
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/269 (70%), Positives = 224/269 (83%), Gaps = 2/269 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTD+NALL GI+TDKDIATRVIA L ++T V+KVMTRNP FV SDTLA
Sbjct: 73 MAARRVDAVLLTDANALLSGIMTDKDIATRVIAEGLRPDQTMVAKVMTRNPLFVTSDTLA 132
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
++ALQKMVQGKFRHLPVVENGEVIA+LDI KCLYDAI+RME+AAE+G AIAAAVEG E+
Sbjct: 133 IDALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGAERQ 192
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
G++ S PN ++TLRER+FRPSLST+I E +KV S D V +A KKM ELR++SAV+
Sbjct: 193 RGSNASAPNALLDTLRERIFRPSLSTLISENTKVAIASAADPVYVAAKKMRELRVNSAVI 252
Query: 181 T--VENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDG 238
K +GILTSKDILMRV++QNL + TLVEKVMTPNP+CAT+DT I+DALH+MHDG
Sbjct: 253 VSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMTPNPDCATLDTTILDALHMMHDG 312
Query: 239 KFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
KFLHLPVVDR G V VDV+ ITHAA++
Sbjct: 313 KFLHLPVVDRHGYVAACVDVLQITHAAIS 341
>gi|218186500|gb|EEC68927.1| hypothetical protein OsI_37618 [Oryza sativa Indica Group]
Length = 543
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/266 (67%), Positives = 224/266 (84%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTD+ LL GI+TDKD+ATRV+A L +E+T +SK+MTRNPT+ +SDTLA
Sbjct: 80 MAARRVDAVLLTDAQGLLSGIVTDKDVATRVVAEGLRVEQTIMSKIMTRNPTYAMSDTLA 139
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVVENGEVIA+LDIAKCLYDAI+R+E+AAE+G AIAAAVEGVE+
Sbjct: 140 IEALQKMVQGKFRHLPVVENGEVIAMLDIAKCLYDAISRLEKAAEQGSAIAAAVEGVERQ 199
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
G + S P FIETLRERMF+PSLS+I+ E +KV +SP+D V +AT+KM E R++S VV
Sbjct: 200 LGGNFSAPYAFIETLRERMFKPSLSSIVTEGTKVAIVSPSDPVYVATQKMREFRVNSVVV 259
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
N +GI TSKD+LMRV++QNL + TLVEKVMT NP+ AT+DT I+DALHIMHDGKF
Sbjct: 260 ATGNTLQGIFTSKDLLMRVVAQNLSPELTLVEKVMTVNPDFATLDTTILDALHIMHDGKF 319
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAV 266
LH+PV+DR+G + +DV+ +THAA+
Sbjct: 320 LHIPVLDREGQIAACLDVLQLTHAAI 345
>gi|357156732|ref|XP_003577557.1| PREDICTED: CBS domain-containing protein CBSCBSPB5-like
[Brachypodium distachyon]
Length = 533
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/269 (72%), Positives = 225/269 (83%), Gaps = 12/269 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA LLTDSNALLCGILTDKDIATRVIAREL ++ETPV KVMTR+P FV+SDTLA
Sbjct: 70 MAARRVDAALLTDSNALLCGILTDKDIATRVIARELKIDETPVWKVMTRHPVFVISDTLA 129
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGK-AIAAAVEGVEK 119
VEALQKMVQGKFRHLPVVENGEVIA+LDIAKCLYDAIARMERA+EKGK AIA AV+GV+K
Sbjct: 130 VEALQKMVQGKFRHLPVVENGEVIAMLDIAKCLYDAIARMERASEKGKAAIANAVDGVDK 189
Query: 120 -HWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSA 178
HW E +E++FRPSLSTII S +V SP D+VL ATKKMLE SA
Sbjct: 190 YHWA----------EAFKEQIFRPSLSTIITADSTIVIASPGDSVLAATKKMLEAHSCSA 239
Query: 179 VVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDG 238
VV V NK +GILTS+DILMR+I++NLPADST V+KVMT +P+CAT+DTPI+DAL M +
Sbjct: 240 VVAVGNKVQGILTSRDILMRMIAKNLPADSTPVDKVMTLDPDCATVDTPILDALRTMQER 299
Query: 239 KFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
KFLHLPV+DRDG +V +VDVI ITHAA++
Sbjct: 300 KFLHLPVMDRDGSIVCIVDVIDITHAAIS 328
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Query: 20 GILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE 79
GILT +DI R+IA+ L + TPV KVMT +P DT ++AL+ M + KF HLPV++
Sbjct: 249 GILTSRDILMRMIAKNLPADSTPVDKVMTLDPDCATVDTPILDALRTMQERKFLHLPVMD 308
Query: 80 -NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSIS 126
+G ++ ++D+ + AI+ +E + AA+ +++ W ++++
Sbjct: 309 RDGSIVCIVDVIDITHAAISIVESSGGGVSNDDAAISMIQRFWDSAMA 356
>gi|357157411|ref|XP_003577789.1| PREDICTED: CBS domain-containing protein CBSCBSPB3-like
[Brachypodium distachyon]
Length = 556
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/267 (68%), Positives = 225/267 (84%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTD+N LL GI+TDKD+ATRVIA L +E T +SK+MTRNP +V SDTLA
Sbjct: 93 MAARRVDAVLLTDANGLLSGIVTDKDVATRVIAEGLRVEHTIISKIMTRNPLYVSSDTLA 152
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVVENGEVIA+LDIAKC+YDAI+R+E+AAE+G A+AAAVEGVE+
Sbjct: 153 IEALQKMVQGKFRHLPVVENGEVIAMLDIAKCMYDAISRLEKAAEQGSALAAAVEGVERQ 212
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
G + + P IETLRERMF+PSLSTII E +KV T+S +D V +A +KM ELR++S V+
Sbjct: 213 LGGNFTAPYALIETLRERMFKPSLSTIITENTKVATVSLSDPVYVAAQKMRELRVNSVVI 272
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
T N +GI TSKD+LMRV++QNL + TLVEKVMT +P+CAT+DT I+DALHIMHDGKF
Sbjct: 273 TNGNSLQGIFTSKDVLMRVVAQNLSPELTLVEKVMTAHPDCATLDTSILDALHIMHDGKF 332
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVA 267
LH+PVVD DG VV +DV+ +THAA++
Sbjct: 333 LHIPVVDGDGRVVACLDVLQLTHAAIS 359
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 74/123 (60%), Gaps = 4/123 (3%)
Query: 5 RVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEAL 64
RV+++++T+ N+L GI T KD+ RV+A+ L+ E T V KVMT +P DT ++AL
Sbjct: 266 RVNSVVITNGNSLQ-GIFTSKDVLMRVVAQNLSPELTLVEKVMTAHPDCATLDTSILDAL 324
Query: 65 QKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGT 123
M GKF H+PVV+ +G V+A LD+ + + AI+ E +A V ++ W +
Sbjct: 325 HIMHDGKFLHIPVVDGDGRVVACLDVLQLTHAAISMAEGGPGAANDVANTV--MQNFWDS 382
Query: 124 SIS 126
+++
Sbjct: 383 ALA 385
>gi|356527022|ref|XP_003532113.1| PREDICTED: CBS domain-containing protein CBSCBSPB3-like [Glycine
max]
Length = 535
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/269 (70%), Positives = 226/269 (84%), Gaps = 3/269 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA RRVDA+LLTDSNALL GI+TDKDIATRVIA L E+T VSKVMTR+P FV SD LA
Sbjct: 74 MATRRVDAVLLTDSNALLSGIMTDKDIATRVIAEGLRPEQTMVSKVMTRSPIFVTSDMLA 133
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVVENGEVIA+LDI +CLYDAI RMERAAE+G AIAAAVEGVE+H
Sbjct: 134 LEALQKMVQGKFRHLPVVENGEVIAILDITRCLYDAITRMERAAEQGSAIAAAVEGVERH 193
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
G+++S + IETL+ERMF+PSLST++ E +KV SP D V +A KKM +LR++SAV+
Sbjct: 194 RGSNVSA-SALIETLKERMFKPSLSTLMGENTKVAIASPADPVYVAAKKMRDLRVNSAVI 252
Query: 181 T--VENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDG 238
K +GILTSKDILMRV++QNL + TLVEKVMTPNP+CA+IDT I+DALH+MHDG
Sbjct: 253 VSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMTPNPDCASIDTTILDALHMMHDG 312
Query: 239 KFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
KFLHLPVVD+DG VV +DV+ ITHAA++
Sbjct: 313 KFLHLPVVDKDGYVVACMDVLQITHAAIS 341
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 73/120 (60%), Gaps = 3/120 (2%)
Query: 8 ALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKM 67
A++++ S + GILT KDI RV+A+ L+ E T V KVMT NP DT ++AL M
Sbjct: 250 AVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMTPNPDCASIDTTILDALHMM 309
Query: 68 VQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSIS 126
GKF HLPVV+ +G V+A +D+ + + AI+ +E ++ +A + ++K W ++ +
Sbjct: 310 HDGKFLHLPVVDKDGYVVACMDVLQITHAAISMVESSSGAVNDVANTI--MQKFWDSAFN 367
>gi|326524536|dbj|BAK00651.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 559
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/267 (67%), Positives = 227/267 (85%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTD N LL GI+TDKDIATRVIA L +E+T +SK+MTR+P +V +DTLA
Sbjct: 97 MAARRVDAVLLTDVNGLLSGIVTDKDIATRVIAEGLRVEQTIISKIMTRSPHYVTADTLA 156
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVV+NGEVIA+LDIAKCLYDAI+R+E+AAE+G A+AAAVEGVE+
Sbjct: 157 IEALQKMVQGKFRHLPVVDNGEVIAMLDIAKCLYDAISRLEKAAEQGSALAAAVEGVERQ 216
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
G++ S P+T IET+RERMF+PSLSTII E +KV +SP+D V +A +KM ELR++S V+
Sbjct: 217 LGSNFSAPSTLIETIRERMFKPSLSTIITESTKVAIVSPSDPVYVAAQKMRELRVNSVVI 276
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
T N +GI TSKD+LMRV++QNL + TLVEKVMT +P+CAT+DT I+DALHIMHDGKF
Sbjct: 277 TTGNLLQGIFTSKDVLMRVVAQNLSPELTLVEKVMTAHPDCATLDTSILDALHIMHDGKF 336
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVA 267
LH+PVVD DG VV +DV+ +T AA++
Sbjct: 337 LHIPVVDGDGRVVACLDVLQLTQAAIS 363
>gi|356507428|ref|XP_003522469.1| PREDICTED: CBS domain-containing protein CBSCBSPB3-like [Glycine
max]
Length = 734
Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/267 (68%), Positives = 224/267 (83%), Gaps = 2/267 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARR+DA+LLTDSNALL GILTDKD+ATRV+ L EET VSKVMTRNP FV SDTLA
Sbjct: 64 MAARRIDAVLLTDSNALLAGILTDKDVATRVVTEGLKPEETTVSKVMTRNPIFVTSDTLA 123
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
++ALQKM+QGKFRHLPVVENGEVIA+LDI KCLYDAI+RME A + G A+AAAVEGVE
Sbjct: 124 IDALQKMIQGKFRHLPVVENGEVIAMLDITKCLYDAISRMESATQHGSAVAAAVEGVELQ 183
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
++ PNTFIETLRER+F+PSLSTI+ E +KV +D V +A KKM EL ++SAV+
Sbjct: 184 QTSN--APNTFIETLRERVFKPSLSTIVDENTKVAIALASDPVYVAAKKMRELHVNSAVI 241
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
+ENK +GILTSKDILMRV++QNL +S L+EKVMTPNP+CA+++T I+DALH+MH+GKF
Sbjct: 242 VMENKIQGILTSKDILMRVVAQNLSPESALLEKVMTPNPQCASLETTILDALHMMHNGKF 301
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVA 267
LHLPVVDRDG+V +DV+ ITHAA++
Sbjct: 302 LHLPVVDRDGNVTACLDVLQITHAAIS 328
>gi|242084930|ref|XP_002442890.1| hypothetical protein SORBIDRAFT_08g004470 [Sorghum bicolor]
gi|241943583|gb|EES16728.1| hypothetical protein SORBIDRAFT_08g004470 [Sorghum bicolor]
Length = 549
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/266 (68%), Positives = 222/266 (83%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTD++ LL GI+TDKDIATRVIA L +E+T +SK+MTRNP +V+SDT A
Sbjct: 86 MAARRVDAVLLTDAHGLLSGIVTDKDIATRVIAEGLRVEQTIISKIMTRNPIYVMSDTPA 145
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVVENGEVIA+LDIAKCLYDAI+R+E+AAE+G AIAAAVEGVE
Sbjct: 146 IEALQKMVQGKFRHLPVVENGEVIAMLDIAKCLYDAISRLEKAAEQGSAIAAAVEGVECQ 205
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
G + S P+ IETLRERMF+PSLSTI+ E +KV +SPTD V +A +KM E R++S VV
Sbjct: 206 LGGNFSVPSALIETLRERMFKPSLSTIVTENTKVAIVSPTDPVYVAAQKMREFRVNSVVV 265
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
N +GI TSKDILMRV+SQN+ D TLVEKVMT NP+CAT++T I+DALHIMHDGKF
Sbjct: 266 ATGNTLQGIFTSKDILMRVVSQNISPDLTLVEKVMTANPDCATLETTILDALHIMHDGKF 325
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAV 266
LH+PV+D+DG + +DV+ +THA +
Sbjct: 326 LHIPVIDKDGQIAACLDVLQLTHATI 351
>gi|356512874|ref|XP_003525140.1| PREDICTED: CBS domain-containing protein CBSCBSPB3-like [Glycine
max]
Length = 535
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/269 (69%), Positives = 226/269 (84%), Gaps = 3/269 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTDSN LL GI+TDKDIATRVIA L E+T VSKVMTR+P FV SDTLA
Sbjct: 74 MAARRVDAVLLTDSNVLLSGIMTDKDIATRVIAEGLRPEQTMVSKVMTRSPIFVTSDTLA 133
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVVENGEVIA+LDI +CLYDAI RME+AAE+G AIAAAVEGVE+H
Sbjct: 134 LEALQKMVQGKFRHLPVVENGEVIAILDITRCLYDAITRMEKAAEQGSAIAAAVEGVERH 193
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
G+++S + IE LRERMF+PSLST++ E +KV SP D V +A +KM +LR++SAV+
Sbjct: 194 RGSNVSA-SALIEALRERMFKPSLSTLMGENTKVAIASPADPVYVAARKMRDLRVNSAVI 252
Query: 181 T--VENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDG 238
K +GILTSKDILMRV++QNL + TLVEKVMTPNP+CA++DT I+D+LH+MHDG
Sbjct: 253 VSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMTPNPDCASVDTTILDSLHMMHDG 312
Query: 239 KFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
KFLHLPVVD+DG VV +DV+ ITHAA++
Sbjct: 313 KFLHLPVVDKDGYVVACMDVLQITHAAIS 341
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 73/120 (60%), Gaps = 3/120 (2%)
Query: 8 ALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKM 67
A++++ S + GILT KDI RV+A+ L+ E T V KVMT NP DT +++L M
Sbjct: 250 AVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMTPNPDCASVDTTILDSLHMM 309
Query: 68 VQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSIS 126
GKF HLPVV+ +G V+A +D+ + + AI+ +E ++ +A + ++K W ++ +
Sbjct: 310 HDGKFLHLPVVDKDGYVVACMDVLQITHAAISMVESSSGAVNDVANTI--MQKFWDSAFN 367
>gi|168002427|ref|XP_001753915.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694891|gb|EDQ81237.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 525
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/269 (69%), Positives = 218/269 (81%), Gaps = 1/269 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA RRV A LLTDSNALLCGI+TD+DI+TRVIA L EE VSKVMTRNP FV+ DTLA
Sbjct: 53 MATRRVTAALLTDSNALLCGIITDQDISTRVIAEGLKPEEISVSKVMTRNPVFVMGDTLA 112
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQ MVQGKFRHLPVVE+GEVIALLDI KCLYDAIAR+E AAEKG AIAAA+E VE+
Sbjct: 113 VEALQTMVQGKFRHLPVVEDGEVIALLDITKCLYDAIARVEGAAEKGNAIAAAIESVERE 172
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
W S + F+E LR+RMF+P+L ++I E +KV T S ++TV ATKKM +LR+SS +V
Sbjct: 173 WSVKGSDKSNFVENLRDRMFKPTLRSLIAEGTKVATCSSSETVTTATKKMRDLRMSSVIV 232
Query: 181 TVEN-KPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGK 239
T + KPRGILTSKD+LM+VI+Q LP +ST ++KVMTPNPECA +DT +VDALH MHD K
Sbjct: 233 TSSSRKPRGILTSKDVLMKVIAQGLPPESTTLDKVMTPNPECAGLDTTLVDALHAMHDRK 292
Query: 240 FLHLPVVDRDGDVVDVVDVIHITHAAVAT 268
FLHLPV D DG VV VDV+H+TH AVAT
Sbjct: 293 FLHLPVTDSDGSVVACVDVLHLTHGAVAT 321
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 70/122 (57%), Gaps = 3/122 (2%)
Query: 5 RVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEAL 64
R+ ++++T S+ GILT KD+ +VIA+ L E T + KVMT NP DT V+AL
Sbjct: 226 RMSSVIVTSSSRKPRGILTSKDVLMKVIAQGLPPESTTLDKVMTPNPECAGLDTTLVDAL 285
Query: 65 QKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGT 123
M KF HLPV + +G V+A +D+ + A+A + +A G A A A ++ W +
Sbjct: 286 HAMHDRKFLHLPVTDSDGSVVACVDVLHLTHGAVATV--SACGGVAQAMATTMLQTFWDS 343
Query: 124 SI 125
++
Sbjct: 344 AM 345
>gi|168028557|ref|XP_001766794.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682003|gb|EDQ68425.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 441
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/264 (70%), Positives = 218/264 (82%), Gaps = 1/264 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA RRVDA LLTDS+ALLCGI+TDKD+ATRVIA L EET VSKVMTRNP FV+ DTLA
Sbjct: 29 MATRRVDAALLTDSSALLCGIITDKDVATRVIADGLKPEETLVSKVMTRNPIFVMGDTLA 88
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQGKFRHLPVVE GEV+ALLDI KCLYDAIARMERAAEKG AIAAAVE VE+
Sbjct: 89 VEALQKMVQGKFRHLPVVEGGEVVALLDITKCLYDAIARMERAAEKGNAIAAAVESVERE 148
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
W S ++FIE LR+RMFRP+L +II E +KV T SP++TV ATKKM E R++S V+
Sbjct: 149 WSVKGSDKSSFIENLRDRMFRPTLGSIITEGTKVPTCSPSETVTDATKKMKEQRMNSVVI 208
Query: 181 T-VENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGK 239
T NKP GILTSKD+LMRV++++L + T ++KVMTPNPECA++DT +VDALH MHDGK
Sbjct: 209 TSSSNKPIGILTSKDVLMRVVAKDLQPEKTTLDKVMTPNPECASLDTTLVDALHTMHDGK 268
Query: 240 FLHLPVVDRDGDVVDVVDVIHITH 263
FLHLPV DRDG +V VDV+ +TH
Sbjct: 269 FLHLPVKDRDGLLVACVDVLQLTH 292
>gi|226501428|ref|NP_001148069.1| CBS domain containing protein [Zea mays]
gi|195615614|gb|ACG29637.1| CBS domain containing protein [Zea mays]
gi|223947611|gb|ACN27889.1| unknown [Zea mays]
gi|414868431|tpg|DAA46988.1| TPA: CBS domain containing protein [Zea mays]
Length = 545
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/266 (66%), Positives = 222/266 (83%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTD+ LL GI+TDKDIATRV+A L +E+T +SK+MTRNP +V+SDTLA
Sbjct: 82 MAARRVDAVLLTDNQGLLSGIVTDKDIATRVVAEGLRVEQTIMSKIMTRNPVYVMSDTLA 141
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVVENGEVIA+LDIAKCLY+AIAR+E+AAE+G AIAAAVEGVE+
Sbjct: 142 IEALQKMVQGKFRHLPVVENGEVIAMLDIAKCLYEAIARLEKAAEQGSAIAAAVEGVERQ 201
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
G + S P+ IETLRERMF+PSLSTI+ E +KV +SPTD V +A +KM E ++S VV
Sbjct: 202 LGGNFSAPSALIETLRERMFKPSLSTIVTENTKVAIVSPTDPVCVAAQKMREFCVNSVVV 261
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
+ N +GI TSKDILMRV+SQN+ + TLVEKVMT NP+CAT++T I+D LHIMHDGKF
Sbjct: 262 STGNTLQGIFTSKDILMRVVSQNISPELTLVEKVMTVNPDCATLETTILDTLHIMHDGKF 321
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAV 266
LH+PV+D+DG + +DV+ +THA +
Sbjct: 322 LHIPVIDKDGQIAACLDVLQLTHATI 347
>gi|414868430|tpg|DAA46987.1| TPA: hypothetical protein ZEAMMB73_412952 [Zea mays]
Length = 529
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/266 (66%), Positives = 222/266 (83%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTD+ LL GI+TDKDIATRV+A L +E+T +SK+MTRNP +V+SDTLA
Sbjct: 82 MAARRVDAVLLTDNQGLLSGIVTDKDIATRVVAEGLRVEQTIMSKIMTRNPVYVMSDTLA 141
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVVENGEVIA+LDIAKCLY+AIAR+E+AAE+G AIAAAVEGVE+
Sbjct: 142 IEALQKMVQGKFRHLPVVENGEVIAMLDIAKCLYEAIARLEKAAEQGSAIAAAVEGVERQ 201
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
G + S P+ IETLRERMF+PSLSTI+ E +KV +SPTD V +A +KM E ++S VV
Sbjct: 202 LGGNFSAPSALIETLRERMFKPSLSTIVTENTKVAIVSPTDPVCVAAQKMREFCVNSVVV 261
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
+ N +GI TSKDILMRV+SQN+ + TLVEKVMT NP+CAT++T I+D LHIMHDGKF
Sbjct: 262 STGNTLQGIFTSKDILMRVVSQNISPELTLVEKVMTVNPDCATLETTILDTLHIMHDGKF 321
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAV 266
LH+PV+D+DG + +DV+ +THA +
Sbjct: 322 LHIPVIDKDGQIAACLDVLQLTHATI 347
>gi|413925448|gb|AFW65380.1| hypothetical protein ZEAMMB73_586556 [Zea mays]
Length = 545
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/267 (65%), Positives = 225/267 (84%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTD+ LL GI+TDKDIATRVIA L +E+T +SK+MTRNP++V++DT A
Sbjct: 84 MAARRVDAVLLTDAGGLLSGIVTDKDIATRVIAEGLRVEQTIISKIMTRNPSYVMADTPA 143
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EAL KMVQGKFRHLPVVENGEVIA+LDIAKCLYDAI+R+E+AAE+G A+AAA+EGVE+
Sbjct: 144 IEALHKMVQGKFRHLPVVENGEVIAMLDIAKCLYDAISRLEKAAEQGSALAAAIEGVERQ 203
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
G + SGP+ +ETLRERMF+PSLSTII E +KV T+S +D V +AT+KM +LR++S ++
Sbjct: 204 LGGNFSGPHNLLETLRERMFKPSLSTIITENTKVATVSLSDPVCVATRKMRDLRVNSVII 263
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
N GI TSKD+LMRV++QNL + TLVEKVMT +P+CAT+DT I+DALHIMHDGKF
Sbjct: 264 MAGNSLHGIFTSKDVLMRVVAQNLSPELTLVEKVMTAHPDCATLDTTILDALHIMHDGKF 323
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVA 267
LH+PV+D DG V +DV+ +THAA++
Sbjct: 324 LHIPVLDGDGQVAACLDVLQLTHAAIS 350
>gi|413925447|gb|AFW65379.1| hypothetical protein ZEAMMB73_586556 [Zea mays]
Length = 388
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/267 (65%), Positives = 225/267 (84%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTD+ LL GI+TDKDIATRVIA L +E+T +SK+MTRNP++V++DT A
Sbjct: 84 MAARRVDAVLLTDAGGLLSGIVTDKDIATRVIAEGLRVEQTIISKIMTRNPSYVMADTPA 143
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EAL KMVQGKFRHLPVVENGEVIA+LDIAKCLYDAI+R+E+AAE+G A+AAA+EGVE+
Sbjct: 144 IEALHKMVQGKFRHLPVVENGEVIAMLDIAKCLYDAISRLEKAAEQGSALAAAIEGVERQ 203
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
G + SGP+ +ETLRERMF+PSLSTII E +KV T+S +D V +AT+KM +LR++S ++
Sbjct: 204 LGGNFSGPHNLLETLRERMFKPSLSTIITENTKVATVSLSDPVCVATRKMRDLRVNSVII 263
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
N GI TSKD+LMRV++QNL + TLVEKVMT +P+CAT+DT I+DALHIMHDGKF
Sbjct: 264 MAGNSLHGIFTSKDVLMRVVAQNLSPELTLVEKVMTAHPDCATLDTTILDALHIMHDGKF 323
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVA 267
LH+PV+D DG V +DV+ +THAA++
Sbjct: 324 LHIPVLDGDGQVAACLDVLQLTHAAIS 350
>gi|218185325|gb|EEC67752.1| hypothetical protein OsI_35274 [Oryza sativa Indica Group]
Length = 560
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/267 (67%), Positives = 222/267 (83%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTD+N LL GI+TDKDIA RVIA L +E+T SK+MTR P +V+SDTLA
Sbjct: 77 MAARRVDAVLLTDANGLLSGIVTDKDIAKRVIAEGLRVEQTITSKIMTRTPVYVMSDTLA 136
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVVENGEVIA+LDIAKCLYDAI+R+E+AAE+G A+AAAVEGVE+
Sbjct: 137 IEALQKMVQGKFRHLPVVENGEVIAMLDIAKCLYDAISRLEKAAEQGSALAAAVEGVERQ 196
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
G ++ ++ IETLRERM +PSLSTII E +KV +SP D V +A +KM ELR++S V+
Sbjct: 197 VGDNLPDHSSVIETLRERMLKPSLSTIISENTKVAIVSPWDPVCVAARKMRELRVNSVVI 256
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
T N +GI TSKD+LMRV++QNL + T VEKVMT +PECAT+DT I+DALHIMHDGKF
Sbjct: 257 TAGNSLQGIFTSKDVLMRVVTQNLSPELTHVEKVMTAHPECATLDTSILDALHIMHDGKF 316
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVA 267
LH+PVVD +G VV +DV+ ITHAA++
Sbjct: 317 LHIPVVDGEGRVVACLDVLQITHAAIS 343
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 74/123 (60%), Gaps = 4/123 (3%)
Query: 5 RVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEAL 64
RV+++++T N+L GI T KD+ RV+ + L+ E T V KVMT +P DT ++AL
Sbjct: 250 RVNSVVITAGNSLQ-GIFTSKDVLMRVVTQNLSPELTHVEKVMTAHPECATLDTSILDAL 308
Query: 65 QKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGT 123
M GKF H+PVV+ G V+A LD+ + + AI+ +E E +A + ++K W +
Sbjct: 309 HIMHDGKFLHIPVVDGEGRVVACLDVLQITHAAISMVEGGPETTNDVANTI--MQKFWDS 366
Query: 124 SIS 126
+++
Sbjct: 367 ALA 369
>gi|168028206|ref|XP_001766619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682051|gb|EDQ68472.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 459
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 180/269 (66%), Positives = 218/269 (81%), Gaps = 1/269 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA RRVDA LLTDSNALLCGI+TDKD+A R+IA L EET VSKVMTRNPTFV+ DTLA
Sbjct: 29 MATRRVDAALLTDSNALLCGIITDKDVAIRIIAEGLKPEETSVSKVMTRNPTFVMGDTLA 88
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQG+FRHLPVVE+GEV+ALLDI KCLYD IAR+ERAAEKG A+AAAVE VE+
Sbjct: 89 VEALQKMVQGRFRHLPVVEHGEVVALLDITKCLYDVIARIERAAEKGNALAAAVESVERE 148
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
W S + FI+ LR+RM RP+L ++I E + V T SP++TV +A+KKM E +++S ++
Sbjct: 149 WSVKGSDESNFIQNLRDRMLRPTLRSLIAEVASVPTCSPSETVTVASKKMKEQQMNSVII 208
Query: 181 TVE-NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGK 239
T +KP GILTSKD+LMRV++Q L ++T ++KVMTPNPECA DT +VDALHIMHDGK
Sbjct: 209 TSSCSKPIGILTSKDVLMRVVAQGLHPETTTLDKVMTPNPECAGFDTTLVDALHIMHDGK 268
Query: 240 FLHLPVVDRDGDVVDVVDVIHITHAAVAT 268
FLHLPV D DG VV +DV+ +TH AVAT
Sbjct: 269 FLHLPVTDHDGFVVTCLDVLQLTHGAVAT 297
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 93/176 (52%), Gaps = 16/176 (9%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ++++++++T S + GILT KD+ RV+A+ L+ E T + KVMT NP DT
Sbjct: 198 MKEQQMNSVIITSSCSKPIGILTSKDVLMRVVAQGLHPETTTLDKVMTPNPECAGFDTTL 257
Query: 61 VEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
V+AL M GKF HLPV + +G V+ LD+ + + A+A A G+ +A + +++
Sbjct: 258 VDALHIMHDGKFLHLPVTDHDGFVVTCLDVLQLTHGAVATARGAGSGGQDMATTM--LQR 315
Query: 120 HWGTSIS------GPNTFIETLRERMFRPSLSTIIPE-KSKVVTISPTDTVLMATK 168
W ++++ G ++ I+T ER S + E K T P +T K
Sbjct: 316 FWDSALALEPAKEGDDSHIDT-SERQ-----SDVFSERKCGYPTFGPGNTFAFKLK 365
>gi|108864045|gb|ABA91621.2| CBS domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|215768686|dbj|BAH00915.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222615591|gb|EEE51723.1| hypothetical protein OsJ_33116 [Oryza sativa Japonica Group]
Length = 560
Score = 367 bits (941), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 179/267 (67%), Positives = 221/267 (82%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTD+N LL GI+TDKDIA RVIA L +E+T SK+MTR P +V+SDTLA
Sbjct: 77 MAARRVDAVLLTDANGLLSGIVTDKDIAKRVIAEGLRVEQTITSKIMTRTPVYVMSDTLA 136
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVVENGEVIA+LDIAKCLYDAI+R+E+AAE+G A+AAAVEGVE+
Sbjct: 137 IEALQKMVQGKFRHLPVVENGEVIAMLDIAKCLYDAISRLEKAAEQGSALAAAVEGVERQ 196
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
G ++ ++ IETLRERM +PSLSTII E +KV +SP D V +A +KM ELR++S V+
Sbjct: 197 VGDNLPDHSSVIETLRERMLKPSLSTIISENTKVAIVSPWDPVCVAARKMHELRVNSVVI 256
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
T N +GI TSKD+LMRV++QNL + T VEKVMT +PECAT+DT I+DALHIM DGKF
Sbjct: 257 TAGNSLQGIFTSKDVLMRVVTQNLSPELTHVEKVMTAHPECATLDTSILDALHIMRDGKF 316
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVA 267
LH+PVVD +G VV +DV+ ITHAA++
Sbjct: 317 LHIPVVDGEGRVVACLDVLQITHAAIS 343
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 74/123 (60%), Gaps = 4/123 (3%)
Query: 5 RVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEAL 64
RV+++++T N+L GI T KD+ RV+ + L+ E T V KVMT +P DT ++AL
Sbjct: 250 RVNSVVITAGNSLQ-GIFTSKDVLMRVVTQNLSPELTHVEKVMTAHPECATLDTSILDAL 308
Query: 65 QKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGT 123
M GKF H+PVV+ G V+A LD+ + + AI+ +E E +A + ++K W +
Sbjct: 309 HIMRDGKFLHIPVVDGEGRVVACLDVLQITHAAISMVEGGPETTNGVANTI--MQKFWDS 366
Query: 124 SIS 126
+++
Sbjct: 367 ALA 369
>gi|62701927|gb|AAX93000.1| CBS domain, putative [Oryza sativa Japonica Group]
Length = 575
Score = 366 bits (939), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 179/267 (67%), Positives = 221/267 (82%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTD+N LL GI+TDKDIA RVIA L +E+T SK+MTR P +V+SDTLA
Sbjct: 77 MAARRVDAVLLTDANGLLSGIVTDKDIAKRVIAEGLRVEQTITSKIMTRTPVYVMSDTLA 136
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVVENGEVIA+LDIAKCLYDAI+R+E+AAE+G A+AAAVEGVE+
Sbjct: 137 IEALQKMVQGKFRHLPVVENGEVIAMLDIAKCLYDAISRLEKAAEQGSALAAAVEGVERQ 196
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
G ++ ++ IETLRERM +PSLSTII E +KV +SP D V +A +KM ELR++S V+
Sbjct: 197 VGDNLPDHSSVIETLRERMLKPSLSTIISENTKVAIVSPWDPVCVAARKMHELRVNSVVI 256
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
T N +GI TSKD+LMRV++QNL + T VEKVMT +PECAT+DT I+DALHIM DGKF
Sbjct: 257 TAGNSLQGIFTSKDVLMRVVTQNLSPELTHVEKVMTAHPECATLDTSILDALHIMRDGKF 316
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVA 267
LH+PVVD +G VV +DV+ ITHAA++
Sbjct: 317 LHIPVVDGEGRVVACLDVLQITHAAIS 343
>gi|414588468|tpg|DAA39039.1| TPA: hypothetical protein ZEAMMB73_855016 [Zea mays]
Length = 539
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 172/267 (64%), Positives = 220/267 (82%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTD+ LL GI+TDKDIATRVIA L +E+T +SK+MTRNP +V+ DT A
Sbjct: 83 MAARRVDAVLLTDAGGLLSGIVTDKDIATRVIAEGLRVEQTIISKIMTRNPLYVMGDTPA 142
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKM+QGKFRHLPVVENGEVIA+LDI KCLYDAI+R+E+AAE+ A+AAAVEGVE+
Sbjct: 143 IEALQKMIQGKFRHLPVVENGEVIAMLDITKCLYDAISRLEKAAEQESALAAAVEGVERQ 202
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
G + S P+ IET+RERMF+PSLSTII E +KV T+S +D V +A +KM EL+++S ++
Sbjct: 203 LGGNFSAPHNLIETMRERMFKPSLSTIITENTKVATVSLSDPVCVAARKMRELQVNSVII 262
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
T N GI T +D+LMRV++QNL + TLVEKVMT +P+CAT+DT I+DALHIMHDGKF
Sbjct: 263 TAGNLLHGIFTPRDVLMRVVAQNLSPELTLVEKVMTAHPDCATLDTTILDALHIMHDGKF 322
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVA 267
LH+PV+D DG V +DV+ +THAA++
Sbjct: 323 LHIPVLDGDGRVAACLDVLQLTHAAIS 349
>gi|356518878|ref|XP_003528104.1| PREDICTED: LOW QUALITY PROTEIN: CBS domain-containing protein
CBSCBSPB5-like [Glycine max]
Length = 597
Score = 360 bits (923), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 197/268 (73%), Positives = 219/268 (81%), Gaps = 5/268 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ARR DALLLTDSNALLCGILT KDIA RVIA+E+NLEETPVSKVMTRNP FVLS+TLA
Sbjct: 121 MVARRGDALLLTDSNALLCGILTHKDIAARVIAKEINLEETPVSKVMTRNPVFVLSETLA 180
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EALQKMVQG + L + E +A DI CL+DAIARMERAAEKG AIAAAVEGVEKH
Sbjct: 181 AEALQKMVQGWYXLLFCILPFEYMA--DI--CLHDAIARMERAAEKGXAIAAAVEGVEKH 236
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WGTS S +FIE+LR ++F+ SLSTIIPE SK+VT+SPTD++L KKM+E R S AVV
Sbjct: 237 WGTSDSN-TSFIESLRXQIFKLSLSTIIPENSKLVTVSPTDSILTTRKKMVEFRASCAVV 295
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
T +KP GI SKDIL+RVI+QNL +ST VEKVMTPN C IDTPIVDALH MHDGKF
Sbjct: 296 TFNDKPLGIFISKDILLRVIAQNLSPESTPVEKVMTPNSVCVVIDTPIVDALHTMHDGKF 355
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVAT 268
LHLP VDRDG VV VVDVIH+THAAVAT
Sbjct: 356 LHLPAVDRDGSVVAVVDVIHVTHAAVAT 383
>gi|222616000|gb|EEE52132.1| hypothetical protein OsJ_33959 [Oryza sativa Japonica Group]
Length = 542
Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 177/258 (68%), Positives = 210/258 (81%), Gaps = 2/258 (0%)
Query: 10 LLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQ 69
LLTDSNALLCGILTDKDIATRVIAREL +EETP KVMTR+P FV S+TLAVEAL KMVQ
Sbjct: 76 LLTDSNALLCGILTDKDIATRVIARELKIEETPAWKVMTRHPVFVPSETLAVEALHKMVQ 135
Query: 70 GKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPN 129
GKFRHLPVVENGEVIA+LDIAKCLYDAIAR+ERA++KGKA A A + +
Sbjct: 136 GKFRHLPVVENGEVIAMLDIAKCLYDAIARIERASDKGKAAAIASAVDAAAGNDPTA--S 193
Query: 130 TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGI 189
+ +E +E+M RPSLSTI +S VV +SP D+VL AT+KM+E+ SSAVV V NK +GI
Sbjct: 194 SMVEAFKEQMLRPSLSTITTAESTVVIVSPGDSVLTATQKMVEVHASSAVVAVGNKAQGI 253
Query: 190 LTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
LTS+DILMR+I++NLPADST VEKVMT +PECAT+D PI+DAL IM + KFLHLPV+DRD
Sbjct: 254 LTSRDILMRMIAKNLPADSTPVEKVMTLDPECATVDMPILDALRIMQERKFLHLPVMDRD 313
Query: 250 GDVVDVVDVIHITHAAVA 267
G +V ++DVI ITHAA +
Sbjct: 314 GSIVSILDVIDITHAAFS 331
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 67/111 (60%), Gaps = 2/111 (1%)
Query: 20 GILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE 79
GILT +DI R+IA+ L + TPV KVMT +P D ++AL+ M + KF HLPV++
Sbjct: 252 GILTSRDILMRMIAKNLPADSTPVEKVMTLDPECATVDMPILDALRIMQERKFLHLPVMD 311
Query: 80 -NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSIS-GP 128
+G ++++LD+ + A + +E + AA+ V++ W ++++ GP
Sbjct: 312 RDGSIVSILDVIDITHAAFSIVEGNGDGAVNDDAAISMVQRFWDSAMALGP 362
>gi|297598372|ref|NP_001045471.2| Os01g0961200 [Oryza sativa Japonica Group]
gi|57899170|dbj|BAD87222.1| CBS domain-containing protein-like [Oryza sativa Japonica Group]
gi|57900300|dbj|BAD87133.1| CBS domain-containing protein-like [Oryza sativa Japonica Group]
gi|255674099|dbj|BAF07385.2| Os01g0961200 [Oryza sativa Japonica Group]
Length = 533
Score = 343 bits (880), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 162/267 (60%), Positives = 214/267 (80%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA +RVDA LLTDSN +L GILT +DI+ RVIA L +ET V+K MTRNP FV+S++ A
Sbjct: 78 MALKRVDAALLTDSNGMLSGILTAEDISGRVIAEGLRPDETNVAKAMTRNPVFVMSNSPA 137
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMV+GKFRHLPVVE+GEVIA+LDI K LYDAI+RME+AAE+G AIAAA+EGVE+
Sbjct: 138 IEALQKMVKGKFRHLPVVEHGEVIAMLDITKFLYDAISRMEKAAEQGSAIAAAMEGVERQ 197
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WG GP++FIE LR+++F+PSLSTII E + V +SP+D V+ A KKM E R++S VV
Sbjct: 198 WGNDFPGPHSFIENLRDQLFKPSLSTIITENNSVPVVSPSDPVIAAAKKMREYRVNSVVV 257
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
N GILTSKD+++R+++Q+L D TLVEKVMT NP+CAT+DT I++ALH M DGK+
Sbjct: 258 MTGNMLLGILTSKDLVLRLVAQSLSPDVTLVEKVMTTNPDCATLDTSILEALHSMQDGKY 317
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVA 267
LH+PV D++G ++ +D + +THAA++
Sbjct: 318 LHIPVADKNGQIIACLDALQLTHAAIS 344
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 78/127 (61%), Gaps = 5/127 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RV+++++ N LL GILT KD+ R++A+ L+ + T V KVMT NP DT
Sbjct: 247 MREYRVNSVVVMTGNMLL-GILTSKDLVLRLVAQSLSPDVTLVEKVMTTNPDCATLDTSI 305
Query: 61 VEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+EAL M GK+ H+PV + NG++IA LD + + AI+ +E A+E A + A ++K
Sbjct: 306 LEALHSMQDGKYLHIPVADKNGQIIACLDALQLTHAAISMVEGASE---ANSMANTMMQK 362
Query: 120 HWGTSIS 126
W ++++
Sbjct: 363 FWDSALA 369
>gi|413920808|gb|AFW60740.1| hypothetical protein ZEAMMB73_016218 [Zea mays]
Length = 551
Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 176/259 (67%), Positives = 214/259 (82%), Gaps = 10/259 (3%)
Query: 10 LLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQ 69
LLTDSNALLCGILTDKDIATRVIAREL ++ETPV KVMTR+P FVLSDTLAVEALQKMVQ
Sbjct: 83 LLTDSNALLCGILTDKDIATRVIARELKIDETPVWKVMTRHPIFVLSDTLAVEALQKMVQ 142
Query: 70 GKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGK-AIAAAVEGVEKHWGTSISGP 128
GKFRHLPVV+NGEV+A+LDIAKCLYDAI+RMERA+EKGK AIA G +K+
Sbjct: 143 GKFRHLPVVDNGEVVAMLDIAKCLYDAISRMERASEKGKAAIANVAAGDDKY-------- 194
Query: 129 NTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRG 188
+ +E L+E+MFRP LS II E S VV +SP D+VL ATK+M+E +SAVV V +KP+G
Sbjct: 195 -SIVEALKEQMFRPCLSAIIGEDSTVVMVSPGDSVLAATKRMVEAHATSAVVAVGSKPQG 253
Query: 189 ILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDR 248
ILTS+DILMR++++NL AD+T VEKVMTP+PE AT+D PI+DAL M + KFLHLPV+DR
Sbjct: 254 ILTSRDILMRLVAKNLSADATPVEKVMTPDPEFATVDMPILDALRTMQERKFLHLPVMDR 313
Query: 249 DGDVVDVVDVIHITHAAVA 267
DG ++ ++DVI I HAA++
Sbjct: 314 DGSIISIIDVIDIAHAAIS 332
>gi|413920807|gb|AFW60739.1| hypothetical protein ZEAMMB73_016218 [Zea mays]
Length = 564
Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 176/259 (67%), Positives = 214/259 (82%), Gaps = 10/259 (3%)
Query: 10 LLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQ 69
LLTDSNALLCGILTDKDIATRVIAREL ++ETPV KVMTR+P FVLSDTLAVEALQKMVQ
Sbjct: 83 LLTDSNALLCGILTDKDIATRVIARELKIDETPVWKVMTRHPIFVLSDTLAVEALQKMVQ 142
Query: 70 GKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGK-AIAAAVEGVEKHWGTSISGP 128
GKFRHLPVV+NGEV+A+LDIAKCLYDAI+RMERA+EKGK AIA G +K+
Sbjct: 143 GKFRHLPVVDNGEVVAMLDIAKCLYDAISRMERASEKGKAAIANVAAGDDKY-------- 194
Query: 129 NTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRG 188
+ +E L+E+MFRP LS II E S VV +SP D+VL ATK+M+E +SAVV V +KP+G
Sbjct: 195 -SIVEALKEQMFRPCLSAIIGEDSTVVMVSPGDSVLAATKRMVEAHATSAVVAVGSKPQG 253
Query: 189 ILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDR 248
ILTS+DILMR++++NL AD+T VEKVMTP+PE AT+D PI+DAL M + KFLHLPV+DR
Sbjct: 254 ILTSRDILMRLVAKNLSADATPVEKVMTPDPEFATVDMPILDALRTMQERKFLHLPVMDR 313
Query: 249 DGDVVDVVDVIHITHAAVA 267
DG ++ ++DVI I HAA++
Sbjct: 314 DGSIISIIDVIDIAHAAIS 332
>gi|226501000|ref|NP_001145716.1| uncharacterized protein LOC100279220 [Zea mays]
gi|219884141|gb|ACL52445.1| unknown [Zea mays]
Length = 551
Score = 340 bits (871), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 175/259 (67%), Positives = 213/259 (82%), Gaps = 10/259 (3%)
Query: 10 LLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQ 69
LLTDSNALLCGILTDKDIATRVIAREL ++ETPV KVMTR+P FVLSDTLAVEALQKMVQ
Sbjct: 83 LLTDSNALLCGILTDKDIATRVIARELKIDETPVWKVMTRHPIFVLSDTLAVEALQKMVQ 142
Query: 70 GKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGK-AIAAAVEGVEKHWGTSISGP 128
GKFRHLPV +NGEV+A+LDIAKCLYDAI+RMERA+EKGK AIA G +K+
Sbjct: 143 GKFRHLPVADNGEVVAMLDIAKCLYDAISRMERASEKGKAAIANVAAGDDKY-------- 194
Query: 129 NTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRG 188
+ +E L+E+MFRP LS II E S VV +SP D+VL ATK+M+E +SAVV V +KP+G
Sbjct: 195 -SIVEALKEQMFRPCLSAIIGEDSTVVMVSPGDSVLAATKRMVEAHATSAVVAVGSKPQG 253
Query: 189 ILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDR 248
ILTS+DILMR++++NL AD+T VEKVMTP+PE AT+D PI+DAL M + KFLHLPV+DR
Sbjct: 254 ILTSRDILMRLVAKNLSADATPVEKVMTPDPEFATVDMPILDALRTMQERKFLHLPVMDR 313
Query: 249 DGDVVDVVDVIHITHAAVA 267
DG ++ ++DVI I HAA++
Sbjct: 314 DGSIISIIDVIDIAHAAIS 332
>gi|218185780|gb|EEC68207.1| hypothetical protein OsI_36187 [Oryza sativa Indica Group]
Length = 575
Score = 332 bits (852), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 175/271 (64%), Positives = 209/271 (77%), Gaps = 15/271 (5%)
Query: 10 LLTDSNALLCGILTDK-------------DIATRVIARELNLEETPVSKVMTRNPTFVLS 56
LLTDSNALLCGILTDK DIATRVIAREL ++ETP KVMTR+P FV S
Sbjct: 84 LLTDSNALLCGILTDKACTPPKEHWMINQDIATRVIARELKIDETPAWKVMTRHPVFVPS 143
Query: 57 DTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116
+TLAVEAL KMVQGKFRHLPVVENGEVIA+LDIAKCLYDAIAR+ERA++KGKA A A
Sbjct: 144 ETLAVEALHKMVQGKFRHLPVVENGEVIAMLDIAKCLYDAIARIERASDKGKAAAIASAV 203
Query: 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
+ ++ +E +E+M RPSLSTI +S VV +SP D+VL AT+KM+E+ S
Sbjct: 204 DAAAGNDPTA--SSMVEAFKEQMLRPSLSTITTAESTVVIVSPGDSVLTATQKMVEVHAS 261
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
SAVV V NK +GILTS+DILMR+I++NLPADST VEKVMT +PECAT+D PI+DAL M
Sbjct: 262 SAVVAVGNKAQGILTSRDILMRMIAKNLPADSTPVEKVMTLDPECATVDMPILDALRTMQ 321
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
+ KFLHLPV+DRDG +V ++DVI ITHAA +
Sbjct: 322 ERKFLHLPVMDRDGSIVSILDVIDITHAAFS 352
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 67/111 (60%), Gaps = 2/111 (1%)
Query: 20 GILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE 79
GILT +DI R+IA+ L + TPV KVMT +P D ++AL+ M + KF HLPV++
Sbjct: 273 GILTSRDILMRMIAKNLPADSTPVEKVMTLDPECATVDMPILDALRTMQERKFLHLPVMD 332
Query: 80 -NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSIS-GP 128
+G ++++LD+ + A + +E E AA+ V++ W ++++ GP
Sbjct: 333 RDGSIVSILDVIDITHAAFSIVEGNGEGAMNDDAAISMVQRFWDSAMALGP 383
>gi|242070207|ref|XP_002450380.1| hypothetical protein SORBIDRAFT_05g004570 [Sorghum bicolor]
gi|241936223|gb|EES09368.1| hypothetical protein SORBIDRAFT_05g004570 [Sorghum bicolor]
Length = 511
Score = 324 bits (830), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 163/267 (61%), Positives = 196/267 (73%), Gaps = 38/267 (14%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTD+ LL GI+TDKDIATRVIA L +E+T +SK+MTRNP +V DT A
Sbjct: 86 MAARRVDAVLLTDAGGLLSGIVTDKDIATRVIAEGLRVEQTIISKIMTRNPLYVTGDTPA 145
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVVENGEVIA+LDIAKCLYDAI+R+E+AAE+G A+AAAVEGVE+
Sbjct: 146 IEALQKMVQGKFRHLPVVENGEVIAMLDIAKCLYDAISRLEKAAEQGSALAAAVEGVERQ 205
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
G ++SGP IETLRERMF+PSLSTII E +
Sbjct: 206 LGGNVSGPQNVIETLRERMFKPSLSTIITENTN--------------------------- 238
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
SKD+LMRV++QNL TLVEKVMT +P+CAT+DT I+DALHIMHDGKF
Sbjct: 239 -----------SKDVLMRVVAQNLSPQLTLVEKVMTAHPDCATLDTTILDALHIMHDGKF 287
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVA 267
LH+PV+D DG V +DV+ ITHAA++
Sbjct: 288 LHIPVLDGDGQVAACLDVLQITHAAIS 314
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 71/117 (60%), Gaps = 2/117 (1%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILMRVISQNLPADSTL 210
SK +TI TV A ++M R+ + ++T GI+T KDI RVI++ L + T+
Sbjct: 68 SKALTIPEGTTVSEACRRMAARRVDAVLLTDAGGLLSGIVTDKDIATRVIAEGLRVEQTI 127
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
+ K+MT NP T DTP ++AL M GKF HLPVV+ +G+V+ ++D+ + A++
Sbjct: 128 ISKIMTRNPLYVTGDTPAIEALQKMVQGKFRHLPVVE-NGEVIAMLDIAKCLYDAIS 183
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 25 KDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEV 83
KD+ RV+A+ L+ + T V KVMT +P DT ++AL M GKF H+PV++ +G+V
Sbjct: 240 KDVLMRVVAQNLSPQLTLVEKVMTAHPDCATLDTTILDALHIMHDGKFLHIPVLDGDGQV 299
Query: 84 IALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSIS 126
A LD+ + + AI+ +E +A + ++K W ++++
Sbjct: 300 AACLDVLQITHAAISMVEGGPGAANDVANTI--MQKFWDSALA 340
>gi|219363345|ref|NP_001136492.1| uncharacterized protein LOC100216607 [Zea mays]
gi|194695914|gb|ACF82041.1| unknown [Zea mays]
Length = 416
Score = 313 bits (803), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 144/221 (65%), Positives = 186/221 (84%)
Query: 47 MTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEK 106
MTRNP++V++DT A+EAL KMVQGKFRHLPVVENGEVIA+LDIAKCLYDAI+R+E+AAE+
Sbjct: 1 MTRNPSYVMADTPAIEALHKMVQGKFRHLPVVENGEVIAMLDIAKCLYDAISRLEKAAEQ 60
Query: 107 GKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMA 166
G A+AAA+EGVE+ G + SGP+ +ETLRERMF+PSLSTII E +KV T+S +D V +A
Sbjct: 61 GSALAAAIEGVERQLGGNFSGPHNLLETLRERMFKPSLSTIITENTKVATVSLSDPVCVA 120
Query: 167 TKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDT 226
T+KM +LR++S ++ N GI TSKD+LMRV++QNL + TLVEKVMT +P+CAT+DT
Sbjct: 121 TRKMRDLRVNSVIIMAGNSLHGIFTSKDVLMRVVAQNLSPELTLVEKVMTAHPDCATLDT 180
Query: 227 PIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
I+DALHIMHDGKFLH+PV+D DG V +DV+ +THAA++
Sbjct: 181 TILDALHIMHDGKFLHIPVLDGDGQVAACLDVLQLTHAAIS 221
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 83/146 (56%), Gaps = 10/146 (6%)
Query: 5 RVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEAL 64
RV+++++ N+L GI T KD+ RV+A+ L+ E T V KVMT +P DT ++AL
Sbjct: 128 RVNSVIIMAGNSLH-GIFTSKDVLMRVVAQNLSPELTLVEKVMTAHPDCATLDTTILDAL 186
Query: 65 QKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGT 123
M GKF H+PV++ +G+V A LD+ + + AI+ +E +A + ++K W +
Sbjct: 187 HIMHDGKFLHIPVLDGDGQVAACLDVLQLTHAAISMVEGGPGGANDVANTI--MQKFWDS 244
Query: 124 SISGPNTFIETLRERMFRPSLSTIIP 149
++ P+ ++ E LS ++P
Sbjct: 245 ALEPPDEDFDSHSE------LSLVVP 264
>gi|297720703|ref|NP_001172713.1| Os01g0923300 [Oryza sativa Japonica Group]
gi|255674011|dbj|BAH91443.1| Os01g0923300 [Oryza sativa Japonica Group]
Length = 238
Score = 297 bits (760), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 145/153 (94%), Positives = 147/153 (96%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTDSNALLCGILTDKDI TRVIAREL LEETPVSKVMTRNP FVLSDTLA
Sbjct: 86 MAARRVDAVLLTDSNALLCGILTDKDITTRVIARELKLEETPVSKVMTRNPLFVLSDTLA 145
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH
Sbjct: 146 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 205
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSK 153
WG S+SGPNTFIETLRERMFRPSLSTII E SK
Sbjct: 206 WGASVSGPNTFIETLRERMFRPSLSTIISENSK 238
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 69/117 (58%), Gaps = 2/117 (1%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPR-GILTSKDILMRVISQNLPADSTL 210
SK +TI TV A ++M R+ + ++T N GILT KDI RVI++ L + T
Sbjct: 68 SKALTIPDHTTVYEACRRMAARRVDAVLLTDSNALLCGILTDKDITTRVIARELKLEETP 127
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
V KVMT NP DT V+AL M GKF HLPVV+ +G+V+ ++D+ + A+A
Sbjct: 128 VSKVMTRNPLFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIA 183
>gi|222619917|gb|EEE56049.1| hypothetical protein OsJ_04848 [Oryza sativa Japonica Group]
Length = 895
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 134/214 (62%), Positives = 171/214 (79%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA +RVDA LLTDSN +L GILT +DI+ RVIA L +ET V+K MTRNP FV+S++ A
Sbjct: 78 MALKRVDAALLTDSNGMLSGILTAEDISGRVIAEGLRPDETNVAKAMTRNPVFVMSNSPA 137
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMV+GKFRHLPVVE+GEVIA+LDI K LYDAI+RME+AAE+G AIAAA+EGVE+
Sbjct: 138 IEALQKMVKGKFRHLPVVEHGEVIAMLDITKFLYDAISRMEKAAEQGSAIAAAMEGVERQ 197
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WG GP++FIE LR+++F+PSLSTII E + V +SP+D V+ A KKM E R++S VV
Sbjct: 198 WGNDFPGPHSFIENLRDQLFKPSLSTIITENNSVPVVSPSDPVIAAAKKMREYRVNSVVV 257
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKV 214
N GILTSKD+++R+++Q+L D TLVEKV
Sbjct: 258 MTGNMLLGILTSKDLVLRLVAQSLSPDVTLVEKV 291
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 70/117 (59%), Gaps = 2/117 (1%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVISQNLPADSTL 210
+K +T+ +V A ++M R+ +A++T N GILT++DI RVI++ L D T
Sbjct: 60 AKALTLPEATSVSEACRRMALKRVDAALLTDSNGMLSGILTAEDISGRVIAEGLRPDETN 119
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
V K MT NP ++P ++AL M GKF HLPVV+ G+V+ ++D+ + A++
Sbjct: 120 VAKAMTRNPVFVMSNSPAIEALQKMVKGKFRHLPVVEH-GEVIAMLDITKFLYDAIS 175
>gi|302815219|ref|XP_002989291.1| hypothetical protein SELMODRAFT_129621 [Selaginella moellendorffii]
gi|300142869|gb|EFJ09565.1| hypothetical protein SELMODRAFT_129621 [Selaginella moellendorffii]
Length = 406
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 137/269 (50%), Positives = 186/269 (69%), Gaps = 7/269 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA R+DA+LLTDS+++LCGI TDKD+ RVIA+ L EET VS VMTRNP ++ SD LA
Sbjct: 1 MAAARIDAVLLTDSDSVLCGIFTDKDVVARVIAKGLKPEETCVSSVMTRNPVYIASDALA 60
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
AL+KM++GKFRHLPVV+NG+VI+L+++ KCLYDAI +E +AA+ +
Sbjct: 61 DHALRKMIRGKFRHLPVVDNGQVISLVNMKKCLYDAIVTLEWH------MAASFAAMHPE 114
Query: 121 WGTSISGPNT-FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAV 179
GT IE LR++ F+P+L ++I + VTI P +TV ATKKMLE +
Sbjct: 115 KGTCFFFFFFPSIEALRDQTFQPTLGSLIMQSFNAVTICPNETVDTATKKMLEFSSDYVI 174
Query: 180 VTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGK 239
V P GI TSKD+LMRV+++ L ST +EKVMT N ECA++DT +VDALHIMHDG+
Sbjct: 175 VASGRNPVGIFTSKDLLMRVVAKGLCPTSTTIEKVMTRNVECASLDTAVVDALHIMHDGR 234
Query: 240 FLHLPVVDRDGDVVDVVDVIHITHAAVAT 268
F HLP++D+D +VV V+V+ + +A+
Sbjct: 235 FCHLPILDQDRNVVGCVNVMALVECGLAS 263
>gi|302798198|ref|XP_002980859.1| hypothetical protein SELMODRAFT_32029 [Selaginella moellendorffii]
gi|300151398|gb|EFJ18044.1| hypothetical protein SELMODRAFT_32029 [Selaginella moellendorffii]
Length = 427
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 136/273 (49%), Positives = 180/273 (65%), Gaps = 12/273 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA R+DA+LLTDS+++LCGI TDKD+ RVIA+ L EET VS VMTRNP ++ SD LA
Sbjct: 29 MAAARIDAVLLTDSDSVLCGIFTDKDVVARVIAKGLKPEETCVSSVMTRNPVYIPSDALA 88
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
AL+KM++GKFRHLPVV+NG+VIAL+++ KCLYDAI +E +AA+ +
Sbjct: 89 DHALRKMIRGKFRHLPVVDNGQVIALVNMKKCLYDAIVTLEW------HMAASFAAMHPE 142
Query: 121 WGTSISGPN--TFIETLRERMFRPS---LSTIIPEKSKVVTISPTDTVLMATKKMLELRL 175
TS G N T + +F+ S L + VTI P +TV ATKKMLE
Sbjct: 143 KSTS-PGSNISTDVRIFDNAIFQVSEGCLQLTLNLNCSAVTICPNETVDTATKKMLEFSS 201
Query: 176 SSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIM 235
+V P GI TSKD+LMRV+++ L ST +EKVMT N ECA++DT +VDALHIM
Sbjct: 202 DYVIVASGRNPVGIFTSKDLLMRVVAKGLCPTSTAIEKVMTRNVECASLDTAVVDALHIM 261
Query: 236 HDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268
HDG+F HLP++D+D +VV V V+ + +A+
Sbjct: 262 HDGRFCHLPILDQDRNVVGCVSVMALVECGLAS 294
>gi|359473429|ref|XP_002265656.2| PREDICTED: CBS domain-containing protein CBSCBSPB3-like [Vitis
vinifera]
Length = 347
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 123/201 (61%), Positives = 153/201 (76%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+AR+VD +LLTDSNA+L GI+ DKDIATRVI EL E+T VSK+MTR+P V SD+LA
Sbjct: 88 MSARKVDVVLLTDSNAILSGIVIDKDIATRVIVEELRPEQTAVSKIMTRHPILVNSDSLA 147
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EAL+KMVQGKFRHLP+ ENGEVIALLD KCLYDAI+RME+ AE G AI A VEG E+
Sbjct: 148 IEALEKMVQGKFRHLPIAENGEVIALLDFTKCLYDAISRMEKVAEHGSAIVATVEGAERQ 207
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
W ++ S P +FIE LRE MF+ +LSTII E +KV +SP+D + +A KM E R++S +
Sbjct: 208 WESNFSAPYSFIEMLREWMFKLALSTIISENTKVAIVSPSDPISVAATKMREYRVNSVIS 267
Query: 181 TVENKPRGILTSKDILMRVIS 201
+ +GILTSK ILMRV
Sbjct: 268 MTGIQIQGILTSKGILMRVFG 288
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 28/182 (15%)
Query: 90 AKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRE-RMFRPSLSTII 148
+ C + E AE G + A A S P + +R R S + +I
Sbjct: 28 SSCWCNTCRLYEVHAENGSSDAKA------------SSPTCLVYGVRTVNKLRLSKALMI 75
Query: 149 PEKSKVVTISPTDTVLMATKKMLELRL---SSAVVTVENKPRGILTSKDILMRVISQNLP 205
PE I+ +D M + + +++ L S+A+++ GI+ KDI RVI + L
Sbjct: 76 PEG-----ITVSDACRMMSARKVDVVLLTDSNAILS------GIVIDKDIATRVIVEELR 124
Query: 206 ADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 265
+ T V K+MT +P D+ ++AL M GKF HLP+ + +G+V+ ++D + A
Sbjct: 125 PEQTAVSKIMTRHPILVNSDSLAIEALEKMVQGKFRHLPIAE-NGEVIALLDFTKCLYDA 183
Query: 266 VA 267
++
Sbjct: 184 IS 185
>gi|413922419|gb|AFW62351.1| hypothetical protein ZEAMMB73_157791 [Zea mays]
Length = 247
Score = 246 bits (629), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 114/181 (62%), Positives = 149/181 (82%)
Query: 67 MVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSIS 126
++QGKFRHLPVVENGEVIA+LDIAKCLYDAI+R+E+A E+G +AA++EGVE G + S
Sbjct: 33 IIQGKFRHLPVVENGEVIAMLDIAKCLYDAISRLEKAVEQGSVLAASIEGVECQLGGNFS 92
Query: 127 GPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKP 186
P+ +ETLRERMF+ SLSTII E +KV T+S +D V +AT+KM +LR++S ++ N
Sbjct: 93 APHNLLETLRERMFKRSLSTIITENTKVATVSLSDPVCVATRKMRDLRVNSVIIMAGNSL 152
Query: 187 RGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVV 246
GI TSKD+LMRV++QN+ + TLVEKVMT +P+CAT+DT I+DALHIMHDGKFLH+PV+
Sbjct: 153 HGIFTSKDVLMRVVAQNISPELTLVEKVMTAHPDCATLDTTILDALHIMHDGKFLHIPVL 212
Query: 247 D 247
D
Sbjct: 213 D 213
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 5 RVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEAL 64
RV+++++ N+L GI T KD+ RV+A+ ++ E T V KVMT +P DT ++AL
Sbjct: 140 RVNSVIIMAGNSLH-GIFTSKDVLMRVVAQNISPELTLVEKVMTAHPDCATLDTTILDAL 198
Query: 65 QKMVQGKFRHLPVVENGE 82
M GKF H+PV++ +
Sbjct: 199 HIMHDGKFLHIPVLDGAK 216
>gi|226498664|ref|NP_001141602.1| uncharacterized protein LOC100273720 [Zea mays]
gi|194705242|gb|ACF86705.1| unknown [Zea mays]
gi|413951479|gb|AFW84128.1| hypothetical protein ZEAMMB73_744710 [Zea mays]
Length = 357
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 110/140 (78%), Positives = 127/140 (90%)
Query: 129 NTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRG 188
N FIETLRERMFRPSLSTII E SKVVT+ P+DTVL A+KKMLEL++SSAVV +E+KP G
Sbjct: 22 NNFIETLRERMFRPSLSTIISENSKVVTVVPSDTVLTASKKMLELKMSSAVVAIESKPGG 81
Query: 189 ILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDR 248
ILTS+DILMRVI+QNLP +ST VEKVMT PECA++DTPI+DALH MHDGKFLHLPV+DR
Sbjct: 82 ILTSRDILMRVIAQNLPPESTTVEKVMTQCPECASVDTPILDALHTMHDGKFLHLPVLDR 141
Query: 249 DGDVVDVVDVIHITHAAVAT 268
DG+VV VVDV+HITHAA+AT
Sbjct: 142 DGNVVTVVDVLHITHAAIAT 161
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 66/111 (59%), Gaps = 4/111 (3%)
Query: 20 GILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE 79
GILT +DI RVIA+ L E T V KVMT+ P DT ++AL M GKF HLPV++
Sbjct: 81 GILTSRDILMRVIAQNLPPESTTVEKVMTQCPECASVDTPILDALHTMHDGKFLHLPVLD 140
Query: 80 -NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSIS-GP 128
+G V+ ++D+ + AIA + + G +A+ +++ W +++S GP
Sbjct: 141 RDGNVVTVVDVLHITHAAIATVGNSGAAGSESTSAM--MQRFWDSAMSIGP 189
>gi|242055665|ref|XP_002456978.1| hypothetical protein SORBIDRAFT_03g046640 [Sorghum bicolor]
gi|241928953|gb|EES02098.1| hypothetical protein SORBIDRAFT_03g046640 [Sorghum bicolor]
Length = 428
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 103/152 (67%), Positives = 130/152 (85%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTD++ +L GILT +DIA RVIA L +ET ++KVMTRNP FV+S++ A
Sbjct: 78 MAARRVDAVLLTDASGMLSGILTAEDIAGRVIAEGLKPDETYMAKVMTRNPVFVMSNSSA 137
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVVE+GEVIA++DI K LYDAI+RME+AAE+G AIAAA+EGVE+
Sbjct: 138 IEALQKMVQGKFRHLPVVEHGEVIAMVDIKKFLYDAISRMEKAAEQGSAIAAAMEGVERQ 197
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKS 152
WG GP+ F+E+LR++MF+PSLST+I E S
Sbjct: 198 WGNDFPGPHAFMESLRQQMFKPSLSTVITENS 229
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 73/134 (54%), Gaps = 9/134 (6%)
Query: 142 PSLSTIIPEK-------SKVVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSK 193
PS + PE+ ++ +T+ V A ++M R+ + ++T GILT++
Sbjct: 43 PSSAAETPERTVKKLRLARALTLPEATPVSEACRRMAARRVDAVLLTDASGMLSGILTAE 102
Query: 194 DILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVV 253
DI RVI++ L D T + KVMT NP ++ ++AL M GKF HLPVV+ G+V+
Sbjct: 103 DIAGRVIAEGLKPDETYMAKVMTRNPVFVMSNSSAIEALQKMVQGKFRHLPVVEH-GEVI 161
Query: 254 DVVDVIHITHAAVA 267
+VD+ + A++
Sbjct: 162 AMVDIKKFLYDAIS 175
>gi|348688916|gb|EGZ28730.1| hypothetical protein PHYSODRAFT_349233 [Phytophthora sojae]
Length = 546
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/270 (43%), Positives = 175/270 (64%), Gaps = 8/270 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M R+ DA LL D + LL GILTD+D+A +V+A + T +VMT +P+ V ++ A
Sbjct: 65 MVERKTDAALLVDRSGLLTGILTDRDVAVKVVAVGRDPTRTLAYEVMTPDPSCVSANASA 124
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
++AL+KM+ G+FRHLPV +N +V+ +LDIAKCLY+AIA++E A K + +E K
Sbjct: 125 IDALKKMISGQFRHLPVTDNDKVVGILDIAKCLYEAIAKLEHAYRKS---SDRLEETVKK 181
Query: 121 WGTSISGPN--TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSA 178
S+SG E+LR+++F P+LS II E S+V +SPT T + A + ML ++ +SA
Sbjct: 182 LQQSLSGSTEANLFESLRQKLFLPTLSAIIMEGSEVPVLSPTSTAMDAARMML-IQKTSA 240
Query: 179 VVTVENKPR--GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
V+ + R GI T+KD++ RV++ +L L+ VMTP P+ AT+ T I++ LH MH
Sbjct: 241 VMVCDEADRTVGIFTTKDLMRRVVALSLEPSQCLLSGVMTPEPQTATLGTTILETLHSMH 300
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
+GKFLH+PV D +V +VDV+ +TH V
Sbjct: 301 NGKFLHVPVFDSGKKLVGIVDVLQVTHGVV 330
>gi|301118278|ref|XP_002906867.1| myosin-like protein [Phytophthora infestans T30-4]
gi|262108216|gb|EEY66268.1| myosin-like protein [Phytophthora infestans T30-4]
Length = 550
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 112/270 (41%), Positives = 175/270 (64%), Gaps = 8/270 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M R+ DA LL D N LL GILTD+D+A +V+A + T +VMT +P+ V +++ A
Sbjct: 67 MVERKTDAALLVDRNGLLTGILTDRDVAVKVVAVGRDPGRTLAHEVMTPDPSCVSANSSA 126
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
++AL+KM+ G+FRHLPV +N +V+ +LDIAKCLY+AI ++E A + + +E K
Sbjct: 127 IDALKKMISGQFRHLPVTDNDKVVGILDIAKCLYEAITKLEHAYRES---SDRLEETVKK 183
Query: 121 WGTSISGPN--TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSA 178
S+SG E+LR+++F P+LS I+ E S+V + P+ T + A + ML ++ +SA
Sbjct: 184 LQDSLSGSTEANLFESLRQKLFLPTLSAILMEGSEVPVLGPSSTAMDAARMML-IQKTSA 242
Query: 179 VVTVENKPR--GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
V+ + R GI TSKD++ RV++ +L + ++ VMTPNP+ AT+ T I++ LH MH
Sbjct: 243 VMVCDEAGRTVGIFTSKDLMRRVVASSLEPNQCVLSSVMTPNPQTATLGTTILETLHSMH 302
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
+GKFLH+PV D +V +VDV+ +T +
Sbjct: 303 NGKFLHVPVFDNGTKLVGIVDVLQVTRGVI 332
>gi|384494220|gb|EIE84711.1| hypothetical protein RO3G_09421 [Rhizopus delemar RA 99-880]
Length = 370
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 113/267 (42%), Positives = 164/267 (61%), Gaps = 2/267 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+ D L GI T KD+A RV+A L+ T VS +MTRNP V +DT A
Sbjct: 96 MAAKRSDCVLVVDDEEHLNGIFTAKDLAYRVVADNLDARSTTVSDIMTRNPMCVTADTCA 155
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV FRHLPV E G++ LLDI KC+Y+A+ +ME+A + + A+EGVE+
Sbjct: 156 QDALNLMVSRGFRHLPVCNEEGDIFGLLDITKCIYEALHKMEKAYGSSRKLYDALEGVER 215
Query: 120 HWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAV 179
W S ++ETL+++M P L++++ V +S V K M E ++ +
Sbjct: 216 EWANSPVQLVQYMETLKDKMSCPDLTSVLTHHEPV-QVSLKTQVREVAKLMKEYHTTAVL 274
Query: 180 VTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGK 239
V N GI TSKDI +RVI+ L D+ V +VMTP+P+ A T I+DAL MHDG
Sbjct: 275 VMDHNGLAGIFTSKDIALRVIAAGLAPDNCSVVRVMTPHPDTALPSTSILDALKKMHDGH 334
Query: 240 FLHLPVVDRDGDVVDVVDVIHITHAAV 266
+L+LPV+D D ++V ++DV+ +T+A +
Sbjct: 335 YLNLPVLDEDKNLVGLIDVLRLTYATL 361
>gi|147799151|emb|CAN63699.1| hypothetical protein VITISV_002255 [Vitis vinifera]
Length = 1035
Score = 206 bits (523), Expect = 1e-50, Method: Composition-based stats.
Identities = 99/126 (78%), Positives = 114/126 (90%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTDSNALL GI+TDKDIATRVIA EL E+T VSK+MTR+P FV SD+LA
Sbjct: 77 MAARRVDAVLLTDSNALLSGIVTDKDIATRVIAEELRPEQTVVSKIMTRHPIFVNSDSLA 136
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EAL+KMVQGKFRHLPVVENGEVIA+LDI KCLYDAI+RME+AAE G AIAAAVEGVE+
Sbjct: 137 IEALEKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEHGSAIAAAVEGVERQ 196
Query: 121 WGTSIS 126
WG++ +
Sbjct: 197 WGSNFT 202
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/117 (36%), Positives = 70/117 (59%), Gaps = 2/117 (1%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVISQNLPADSTL 210
SK +TI TV A ++M R+ + ++T N GI+T KDI RVI++ L + T+
Sbjct: 59 SKALTIPEGTTVSDACRRMAARRVDAVLLTDSNALLSGIVTDKDIATRVIAEELRPEQTV 118
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
V K+MT +P D+ ++AL M GKF HLPVV+ +G+V+ ++D+ + A++
Sbjct: 119 VSKIMTRHPIFVNSDSLAIEALEKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAIS 174
>gi|384499448|gb|EIE89939.1| hypothetical protein RO3G_14650 [Rhizopus delemar RA 99-880]
Length = 594
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 114/269 (42%), Positives = 169/269 (62%), Gaps = 12/269 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+A+R D +L+ + L GI T KDIA RV+A L+ T VS++MT+NP V SDT A
Sbjct: 83 MSAKRCDCVLVVNEEDQLSGIFTAKDIAYRVVAEGLDARTTIVSQIMTKNPLCVTSDTSA 142
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
EAL MV FRHLPV E G++ LLDI KCLY+A+ +MERA + + A+EGVE+
Sbjct: 143 TEALDLMVTRGFRHLPVCNEEGDIFGLLDITKCLYEALEKMERAFGSSRKLYDALEGVER 202
Query: 120 HW-GTSISGPNTFIETLRERMFRPSLSTII----PEKSKVVTISPTDTVLMATKKMLELR 174
W G S N ++E LRE M P+L +++ P + + T V+M ELR
Sbjct: 203 EWAGESTGQMNEYMENLRESMSCPTLESVLDGTPPAQVRYKTNVKEIAVMMK-----ELR 257
Query: 175 LSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHI 234
++ +VT +K +GI TSKDI++RVI+ L ++ V +VMTP P+ A +T ++DAL +
Sbjct: 258 TTAVLVTKSHKLQGIFTSKDIVLRVIAAGLNPENCTVARVMTPTPDTAAPETTVLDALKL 317
Query: 235 MHDGKFLHLPVVDRDGDVVDVVDVIHITH 263
M++G +L+LPV+ G ++ +VDV+ +T+
Sbjct: 318 MNNGHYLNLPVIGH-GTIIGMVDVLKLTY 345
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M R A+L+T S+ L GI T KDI RVIA LN E V++VMT P +T
Sbjct: 253 MKELRTTAVLVTKSHKLQ-GIFTSKDIVLRVIAAGLNPENCTVARVMTPTPDTAAPETTV 311
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARM 100
++AL+ M G + +LPV+ +G +I ++D+ K Y + +M
Sbjct: 312 LDALKLMNNGHYLNLPVIGHGTIIGMVDVLKLTYVTLEQM 351
>gi|384499555|gb|EIE90046.1| hypothetical protein RO3G_14757 [Rhizopus delemar RA 99-880]
Length = 550
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 111/267 (41%), Positives = 164/267 (61%), Gaps = 2/267 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+ D L GI T KD+A RV+A L+ VS +MTRNP V +DT A
Sbjct: 1 MAAKRSDCVLVVDEEEHLSGIFTAKDLAYRVVADNLDARAITVSDIMTRNPMCVTADTSA 60
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV FRHLPV E G++ LLDI KC+Y+A+ +ME+A + + A+EGVE+
Sbjct: 61 QDALNLMVSRGFRHLPVCNEEGDIFGLLDITKCIYEALHKMEKAYSSSRKLYDALEGVER 120
Query: 120 HWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAV 179
W S ++E L+++M P L+T++ + + V ++ V K M E ++ +
Sbjct: 121 EWANSPVQLVQYMEALKDKMSCPDLTTVL-DHAGPVQVTMKAQVREVAKLMKEYHTTAVL 179
Query: 180 VTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGK 239
V GI TSKDI++RVI+ L DS V +VMTP+P+ A T I+DAL MHDG
Sbjct: 180 VMDHGGLAGIFTSKDIVLRVIAAGLAPDSCSVVRVMTPHPDTALPSTSILDALKKMHDGH 239
Query: 240 FLHLPVVDRDGDVVDVVDVIHITHAAV 266
+L+LPV+D D ++V ++DV+ +T+A +
Sbjct: 240 YLNLPVLDEDKNIVGLIDVLRLTYATL 266
>gi|384501963|gb|EIE92454.1| hypothetical protein RO3G_16976 [Rhizopus delemar RA 99-880]
Length = 719
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/271 (42%), Positives = 165/271 (60%), Gaps = 11/271 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+AA+R D +L+ D L GI T KD+A RV+A L+ T V+K+MT+ P V SDT A
Sbjct: 95 LAAKRSDCVLVVDDEEHLSGIFTAKDLAYRVVAESLDARNTTVAKIMTKGPMCVTSDTSA 154
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV FRHLPV E G++ LLDI KCLY+A+ +MERA + + A+EGVEK
Sbjct: 155 TDALNLMVSRGFRHLPVCNEEGDIFGLLDITKCLYEALDKMERAFGSSRKLYDALEGVEK 214
Query: 120 HWGTSISGPNTFIETLRERMFRPSLSTII----PEKSKVVTISPTDTVLMATKKMLELRL 175
W S ++E LR++M P LST++ P + V T V + M E
Sbjct: 215 EWNNSPIQLVQYMEALRDKMECPDLSTVLDGHAPPEVNVKT-----NVREVARMMKEYHT 269
Query: 176 SSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIM 235
++ +VT GI T+KD+++RVI+ L ++ V +VMTP+P+ A I+DAL M
Sbjct: 270 TAVLVTDREGLAGIFTTKDVVLRVIAPGLNPENCSVVRVMTPHPDTAPAQMSIMDALRKM 329
Query: 236 HDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
HDG +L+LP+V+ +GDVV +VDV+ +T+A +
Sbjct: 330 HDGHYLNLPIVE-EGDVVGMVDVLKLTYATL 359
>gi|384495647|gb|EIE86138.1| hypothetical protein RO3G_10849 [Rhizopus delemar RA 99-880]
Length = 486
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/276 (40%), Positives = 169/276 (61%), Gaps = 9/276 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+AA+R D +L+ D L GI T KD+A RV+A L+ T V+K+MT+ P V SDT A
Sbjct: 92 LAAKRSDCVLVVDDEEHLSGIFTAKDLAYRVVAECLDARNTTVAKIMTKGPMCVTSDTSA 151
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV FRHLPV E G++ LLDI KCLY+A+ +MERA + + A+EGVEK
Sbjct: 152 TDALNLMVSRGFRHLPVCNEEGDIFGLLDITKCLYEALDKMERAFGSSRKLYDALEGVEK 211
Query: 120 HWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAV 179
W S ++E LR++M P L++++ ++ +S V + M + ++ +
Sbjct: 212 EWNNSPIQLVQYMEALRDKMECPDLNSVLDGQAP-AEVSVKTNVREVARMMKDYHTTAVL 270
Query: 180 VTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGK 239
VT GI T+KD+++RVI+ L ++ V +VMTP+P+ A D I+DAL MHDG
Sbjct: 271 VTDREGLAGIFTTKDVVLRVIAAGLNPENCSVVRVMTPHPDTAPPDMSIMDALKKMHDGH 330
Query: 240 FLHLPVVDRDGDVVDVVDVIHITHAAVATEILLDQI 275
+L+LPVVD +GDV+ +VDV+ +T+ + L+QI
Sbjct: 331 YLNLPVVD-NGDVLGIVDVLKLTY------VTLEQI 359
>gi|393247785|gb|EJD55292.1| CBS-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 650
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 111/274 (40%), Positives = 163/274 (59%), Gaps = 11/274 (4%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D L GI T KD+A RV A L+ TPVS +MTRNP T A
Sbjct: 86 AAKRTDCVLVVDEEEGLSGIFTAKDLAYRVAAEGLDPRNTPVSAIMTRNPMVTRDTTGAT 145
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EAL+ MVQ FRHLPV E+G V+ LLDI K ++A+ ++ER + + A+EGV+
Sbjct: 146 EALELMVQRHFRHLPVCNEDGNVVGLLDITKVFHEALEKVERGSSASLKLYNALEGVQSE 205
Query: 121 WGTSISG-PNT-----FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELR 174
G ++ P ++E LRE+ P L++++ ++ T+ P TV ATK M E R
Sbjct: 206 LGAGLAANPQAAAMLAYVEALREKTALPDLTSVMDSRTNPATVGPRTTVREATKLMKEFR 265
Query: 175 LSSAVVTVENKPR----GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVD 230
++ V +N P GI TSKD+++RVI+ L V +VMTP+P+ A + D
Sbjct: 266 TTAVCVMEKNGPEERIVGIFTSKDVVLRVIAAGLDPGRCSVVRVMTPHPDVAPPTMTVQD 325
Query: 231 ALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
AL MH+G++L+LPV++ DG +V +VDV+ +T+A
Sbjct: 326 ALKKMHNGRYLNLPVIESDGRLVAIVDVLKLTYA 359
>gi|392597207|gb|EIW86529.1| CBS-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 656
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/276 (41%), Positives = 168/276 (60%), Gaps = 14/276 (5%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D L GI T KD+A RV A L+ TPVS++MTR P T A
Sbjct: 85 AAKRTDCVLVVDDEEGLSGIFTAKDLAYRVTAEGLDPHATPVSQIMTRGPMVTRDSTSAT 144
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EALQ MVQ FRHLPV E G V+ LLDI K ++A+ ++ER++ + + +A+ GV+
Sbjct: 145 EALQLMVQRHFRHLPVCNEEGNVVGLLDITKVFHEALNKVERSSSASEKLYSALAGVQSE 204
Query: 121 WGTSIS-GPNT-----FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELR 174
G ++S P ++E LRE+ P L+TI+ ++ T++P TV + M E R
Sbjct: 205 LGPNMSTNPQAAAMLAYVEALREKTALPDLTTIMDSRTHPATVTPKTTVREVARLMKERR 264
Query: 175 LSSAVVTVEN------KPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPI 228
++AV +EN K GI TSKD+++RVI+ L A+ V +VMTP+P+ A T +
Sbjct: 265 -TTAVCVMENHGGIHPKIAGIFTSKDVVLRVIAAGLDANMCSVIRVMTPHPDTAPPTTTV 323
Query: 229 VDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DAL MH+G +L+LPVV+ DG +V +VDV+ +T+A
Sbjct: 324 HDALKKMHNGHYLNLPVVETDGRLVAIVDVLKLTYA 359
>gi|342320856|gb|EGU12794.1| Hypothetical Protein RTG_00812 [Rhodotorula glutinis ATCC 204091]
Length = 1571
Score = 194 bits (494), Expect = 3e-47, Method: Composition-based stats.
Identities = 110/273 (40%), Positives = 167/273 (61%), Gaps = 9/273 (3%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D N LCGI T KD+A RV+ L+ TPVS +MT NP T A
Sbjct: 935 AAKRTDCVLVVDENEHLCGIFTAKDLAFRVVGDGLDPRSTPVSAIMTPNPMVTRDTTSAT 994
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EALQ MV FRHLPV E+G+V+ LLDI K ++++ ++E+A + + +A+EG ++
Sbjct: 995 EALQTMVTRGFRHLPVCNEDGDVVGLLDITKVFHESLEKLEKAYGSSQRLYSALEGAQEQ 1054
Query: 121 WGTSISGPN----TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
+G +G +++ LR++M P L +I+ ++ T+ +V A K M E R +
Sbjct: 1055 FGAVDTGAANPLLAYVQALRDKMSFPDLGSILDARTTAATVGVKTSVREAAKLMREKR-T 1113
Query: 177 SAVVTVE---NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALH 233
+AVV VE K GI TSKD+++RVI+ L + + V +VMTP+P+ A I DAL
Sbjct: 1114 TAVVVVEGDGKKIAGIFTSKDVVLRVIAAGLDSKTCSVVRVMTPHPDVALPSLSIQDALR 1173
Query: 234 IMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
M+DG +L+LPVVD G ++ +VDV+ +T+A +
Sbjct: 1174 KMNDGHYLNLPVVDEAGALIGIVDVLKLTYATL 1206
>gi|358059825|dbj|GAA94471.1| hypothetical protein E5Q_01123 [Mixia osmundae IAM 14324]
Length = 676
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 113/273 (41%), Positives = 163/273 (59%), Gaps = 11/273 (4%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D L GI T KD+A RVI L+ TPVS +MT+NP T A
Sbjct: 123 AAKRTDCVLVVDEEEHLSGIFTAKDLAFRVIGDGLDPRHTPVSAIMTKNPMVTRDTTSAT 182
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+ALQ MV FRHLPV E G+V+ LLDI K ++++ ++ERA + + A+EGV+
Sbjct: 183 DALQTMVTRGFRHLPVCNEEGDVVGLLDITKVFHESLEKLERAYGSSQKLYTALEGVQSE 242
Query: 121 WG----TSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
WG SG ++E LR++M P + +I+ +++ TI TV A K M E R +
Sbjct: 243 WGPQGAQQASGLMAYVEALRDKMSFPDIGSILDVRTRAATIGVKTTVRDAAKIMRENR-T 301
Query: 177 SAVVTVEN-----KPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDA 231
+AV +E K GI TSKD+++RVI+ L A + V +VMTP+P+ A+ I +A
Sbjct: 302 TAVCVLEGDGSTGKLAGIFTSKDVVLRVIAAGLDAKTCSVVRVMTPHPDTASPSLSIQEA 361
Query: 232 LHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
L MHDG +L+LPV+D G +V VDV+ +T+A
Sbjct: 362 LRKMHDGHYLNLPVLDDAGALVGCVDVLKLTYA 394
>gi|242070995|ref|XP_002450774.1| hypothetical protein SORBIDRAFT_05g017490 [Sorghum bicolor]
gi|241936617|gb|EES09762.1| hypothetical protein SORBIDRAFT_05g017490 [Sorghum bicolor]
Length = 511
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 106/172 (61%), Positives = 120/172 (69%), Gaps = 35/172 (20%)
Query: 10 LLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQ 69
LLTDSNALLCGILTDKDIATRVIAREL ++ETPV KVMTR+P FV+SDTLAVEALQKMVQ
Sbjct: 87 LLTDSNALLCGILTDKDIATRVIARELKIDETPVWKVMTRHPIFVISDTLAVEALQKMVQ 146
Query: 70 -------------------------GKFRHLPVVENGEVIALLDIAKCLYDAIARMERAA 104
GKFRHLPVV+NGEV+A+LDIAKCLYDAIARMERA
Sbjct: 147 GTCPIPFPSRGHACALTTDFMHASSGKFRHLPVVDNGEVVAMLDIAKCLYDAIARMERAT 206
Query: 105 EKGK-AIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVV 155
EKGK AIA G +K+ + +E L+E+MFRP LS I E S +V
Sbjct: 207 EKGKAAIANVAAGDDKY---------SIVEALKEQMFRPCLSAIASEDSTLV 249
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 49/61 (80%), Gaps = 3/61 (4%)
Query: 207 DSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
DSTLV MTP+PECAT+D PI+DAL M + KFLHLPV+DRDG ++ ++DVI I HAA+
Sbjct: 245 DSTLV---MTPDPECATVDMPILDALRTMQERKFLHLPVMDRDGSIISIIDVIDIAHAAI 301
Query: 267 A 267
+
Sbjct: 302 S 302
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 52/105 (49%), Gaps = 26/105 (24%)
Query: 188 GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALH-------------- 233
GILT KDI RVI++ L D T V KVMT +P DT V+AL
Sbjct: 97 GILTDKDIATRVIARELKIDETPVWKVMTRHPIFVISDTLAVEALQKMVQGTCPIPFPSR 156
Query: 234 ---------IMH--DGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
MH GKF HLPVVD +G+VV ++D+ + A+A
Sbjct: 157 GHACALTTDFMHASSGKFRHLPVVD-NGEVVAMLDIAKCLYDAIA 200
>gi|390604204|gb|EIN13595.1| CBS-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 665
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 112/279 (40%), Positives = 167/279 (59%), Gaps = 16/279 (5%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D + L GI T KD+A RV A L+ TPVS++MTRNP T A
Sbjct: 83 AAKRTDCVLVVDDDEGLSGIFTAKDLAYRVTAEGLDPHITPVSQIMTRNPMVTRDTTSAT 142
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EALQ MVQ FRHLPV E G V+ LLDI K ++A+ ++ER++ + + +A+ GV+
Sbjct: 143 EALQLMVQKHFRHLPVCNEEGNVVGLLDITKVFHEALDKVERSSSASEKLYSALAGVQSE 202
Query: 121 WGTSISG-PNT-----FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELR 174
G ++ P T ++E+LRE+ P L+T++ +++ T+ P TV K M E R
Sbjct: 203 LGPGVTANPQTAAMLAYVESLREKTALPDLTTVMDSRTQPATVGPRTTVKEVAKLMKERR 262
Query: 175 LSSAVV---------TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATID 225
+++ V T + GI TSKD+++RVI+ L A V +VMTP+P+ A
Sbjct: 263 VTAVCVMESSTGQGATSPQRIAGIFTSKDVVLRVIAAGLEAARCSVVRVMTPHPDTAPPT 322
Query: 226 TPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
+ DAL MH+G +L+LPVV+ DG +V +VDV+ +T+A
Sbjct: 323 MSVHDALKKMHNGHYLNLPVVETDGRLVAIVDVLKLTYA 361
>gi|71006334|ref|XP_757833.1| hypothetical protein UM01686.1 [Ustilago maydis 521]
gi|46097269|gb|EAK82502.1| hypothetical protein UM01686.1 [Ustilago maydis 521]
Length = 708
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 164/285 (57%), Gaps = 23/285 (8%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D + L GI T KD+A RV++ L+ TPVS +MTR+P T A
Sbjct: 87 AAKRTDCVLVVDEDEHLAGIFTAKDLAFRVVSAGLDARNTPVSAIMTRSPMVTRDTTSAT 146
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EAL MV FRHLPV E+G+V+ LLDIAK Y+A+ ++ERA + + A+EGV+
Sbjct: 147 EALNTMVTRGFRHLPVCNEDGDVVGLLDIAKVFYEALEKLERAHGSSQKLYNALEGVQSE 206
Query: 121 WGTSISGPNT----FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
WG S +GP +IE LR++M P L+TI+ ++ + TV A + M E +
Sbjct: 207 WGGS-AGPQQAMLQYIEALRQKMSIPDLTTILDSRTLPCCVGVRTTVREAARLMKEHHTT 265
Query: 177 SAVV-----------------TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 219
+ V V K GI TSKD+++RVI+ L + V +VMTP+P
Sbjct: 266 AVCVMESTGSGPGTGQIGGGGAVSGKIAGIFTSKDVVLRVIAAGLDPKTCSVVRVMTPHP 325
Query: 220 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
+ A I +AL MHDG++L+LPVVD D +V VVDV+ +T+A
Sbjct: 326 DTAPPSLTIQEALRKMHDGRYLNLPVVDVDSRLVGVVDVLKLTYA 370
>gi|343428370|emb|CBQ71900.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 753
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 164/285 (57%), Gaps = 23/285 (8%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D + L GI T KD+A RV++ L+ TPVS +MTR+P T A
Sbjct: 119 AAKRTDCVLVVDEDEHLAGIFTAKDLAFRVVSAGLDARNTPVSAIMTRSPMVTRDTTSAT 178
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EAL MV FRHLPV E+G+V+ LLDIAK Y+A+ ++ERA + + A+EGV+
Sbjct: 179 EALNTMVTRGFRHLPVCNEDGDVVGLLDIAKVFYEALEKLERAHGSSQKLYNALEGVQSE 238
Query: 121 WGTSISGPNT----FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
WG S +GP +IE LR++M P LS+I+ ++ + TV A + M E +
Sbjct: 239 WGGS-AGPQQAMLQYIEALRQKMSIPDLSSILDSRTLPCCVGVRTTVREAARLMKEHHTT 297
Query: 177 SAVV-----------------TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 219
+ V V K GI TSKD+++RVI+ L + V +VMTP+P
Sbjct: 298 AVCVMESTGTGPGNGQIGGGGAVSGKIAGIFTSKDVVLRVIAAGLDPKTCSVVRVMTPHP 357
Query: 220 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
+ A I +AL MHDG++L+LPVVD D +V VVDV+ +T+A
Sbjct: 358 DTAPPSLTIQEALRKMHDGRYLNLPVVDVDSRLVGVVDVLKLTYA 402
>gi|164656969|ref|XP_001729611.1| hypothetical protein MGL_3155 [Malassezia globosa CBS 7966]
gi|159103504|gb|EDP42397.1| hypothetical protein MGL_3155 [Malassezia globosa CBS 7966]
Length = 681
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 167/281 (59%), Gaps = 22/281 (7%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D L GI T KD+A R++A ++ TPVS +MT +P T A
Sbjct: 83 AAKRTDCVLVVDDEEHLAGIFTAKDLAYRIVAGGIDPRMTPVSSIMTVSPMVTRDTTSAT 142
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EAL MV FRHLPV E+G+V+ LLDIAK Y+A+ ++ERA + + A+EGV+
Sbjct: 143 EALSTMVTRGFRHLPVCNEDGDVVGLLDIAKVFYEALEKLERAHGSSQKLYHALEGVQNE 202
Query: 121 WGTSISGPNT----FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
WG GP ++++LRERM P L++I+ ++ T+ TV A + M + R +
Sbjct: 203 WG---GGPQQAMMQYVQSLRERMSMPELASILDSRTMPCTVGVRTTVRDAARLMKQHR-T 258
Query: 177 SAVVTVEN-------------KPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECAT 223
+AV +EN K GI TSKD+++RVI+ L + V +VMTP+P+ A+
Sbjct: 259 TAVCVMENASGAQGERGIATGKIAGIFTSKDVVLRVIAAGLDPERCSVVRVMTPHPDTAS 318
Query: 224 IDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
I +AL MHDG++L+LPVVD D +V VVDV+ +T+A
Sbjct: 319 PSLSIQEALRKMHDGRYLNLPVVDVDARLVGVVDVLKLTYA 359
>gi|443899306|dbj|GAC76637.1| predicted dehydrogenase [Pseudozyma antarctica T-34]
Length = 650
Score = 192 bits (489), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 163/285 (57%), Gaps = 23/285 (8%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D L GI T KD+A RV++ L+ TPVS +MTR+P T A
Sbjct: 34 AAKRTDCVLVVDEEEHLAGIFTAKDLAFRVVSAGLDARNTPVSTIMTRSPMVTRDTTSAT 93
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EAL MV FRHLPV E+G+V+ LLDIAK Y+A+ ++ERA + + A+EGV+
Sbjct: 94 EALNTMVTRGFRHLPVCNEDGDVVGLLDIAKVFYEALEKLERAHGSSQKLYNALEGVQSE 153
Query: 121 WGTSISGPNT----FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
WG S +GP +IE LR++M P LS+I+ ++ + TV A + M E +
Sbjct: 154 WGGS-AGPQQAMLQYIEALRQKMSIPDLSSILDSRTLPCCVGVRTTVREAARLMKEHHTT 212
Query: 177 SAVV-----------------TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 219
+ V V K GI TSKD+++RVI+ L + V +VMTP+P
Sbjct: 213 AVCVMESTGTGPGTGQIGGGGAVSGKIAGIFTSKDVVLRVIAAGLDPKTCSVVRVMTPHP 272
Query: 220 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
+ A I +AL MHDG++L+LPVVD D +V VVDV+ +T+A
Sbjct: 273 DTAPPSLTIQEALRKMHDGRYLNLPVVDVDSRLVGVVDVLKLTYA 317
>gi|388852932|emb|CCF53380.1| uncharacterized protein [Ustilago hordei]
Length = 754
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 164/285 (57%), Gaps = 23/285 (8%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D + L GI T KD+A RV++ L+ TPVS +MTR+P T A
Sbjct: 119 AAKRTDCVLVVDEDEHLAGIFTAKDLAFRVVSAGLDARNTPVSAIMTRSPMVTRDTTSAT 178
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EAL MV FRHLPV E+G+V+ LLDIAK Y+A+ ++ERA + + A+EGV+
Sbjct: 179 EALNTMVTRGFRHLPVCNEDGDVVGLLDIAKVFYEALEKLERAHGSSQKLYNALEGVQSE 238
Query: 121 WGTSISGPNT----FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
WG S +GP +IE LR++M P LS+I+ ++ I TV A + M E +
Sbjct: 239 WGGS-AGPQQAMLQYIEALRQKMSIPDLSSILDSRTLPCCIGVRTTVREAARLMKEHHTT 297
Query: 177 SAVV-----------------TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 219
+ V V K GI TSKD+++RVI+ L + V +VMTP+P
Sbjct: 298 AVCVMESTGTGPGTGQIGGGGAVSGKIAGIFTSKDVVLRVIAAGLDPKTCSVVRVMTPHP 357
Query: 220 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
+ A I +AL MHDG++L+LPVVD D +V +VDV+ +T+A
Sbjct: 358 DTALPSLTIQEALRKMHDGRYLNLPVVDVDSRLVGIVDVLKLTYA 402
>gi|403415486|emb|CCM02186.1| predicted protein [Fibroporia radiculosa]
Length = 663
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/284 (41%), Positives = 169/284 (59%), Gaps = 23/284 (8%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D + L GI T KD+A RV A L+ TPVS +MTR+P T A
Sbjct: 83 AAKRTDCVLVVDDDEGLSGIFTAKDLAYRVTADGLDPHTTPVSTIMTRSPMVTRDTTSAT 142
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EALQ MVQ FRHLPV E G V+ LLDI K ++A+ ++ER++ + + +A+ GV+
Sbjct: 143 EALQLMVQRHFRHLPVCNEEGNVVGLLDITKVFHEALDKVERSSSASEKLYSALAGVQSE 202
Query: 121 WGTSISGPN-------TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLEL 173
GT + G N +++E LRE+ P L+T++ +++ T+SP TV K M E
Sbjct: 203 LGTGM-GANPQAAAMLSYVEALREKTALPDLTTVMDSRTQPATVSPKTTVREVAKLMKER 261
Query: 174 RLSSAVVTVEN-----------KPR--GILTSKDILMRVISQNLPADSTLVEKVMTPNPE 220
R ++AV +EN PR GI TSKDI++RVI+ L A V +VMTP+P+
Sbjct: 262 R-TTAVCVMENISHPPGTVGAELPRIAGIFTSKDIVLRVIAAGLDATRCSVVRVMTPHPD 320
Query: 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
A DAL MH+G +L+LPVV+ DG +V +VDV+ +T+A
Sbjct: 321 TAPPTMTCHDALKKMHNGHYLNLPVVETDGRLVAIVDVLKLTYA 364
>gi|325181316|emb|CCA15731.1| myosinlike protein putative [Albugo laibachii Nc14]
Length = 616
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 108/269 (40%), Positives = 168/269 (62%), Gaps = 5/269 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ++ DA LL D+ L GILTD DIA +V+A + + V +VMT NP+ V +
Sbjct: 124 MVRQKTDAALLVDAKGSLTGILTDSDIAYKVVAMGRDPKMFRVCEVMTPNPSCVAPNANP 183
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE-KGKAIAAAVEGVEK 119
++AL KM+ GKFRHLPV +N +++ +LDIAKC+YDAIAR++ + ++ V+ +
Sbjct: 184 IDALNKMISGKFRHLPVADNEKIVGILDIAKCVYDAIARIQHTYDVSDDRLSEVVQKLRS 243
Query: 120 HWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAV 179
H+ S++ N + LRE++F +LS I+ E + V + P DT A K ML R+S+ +
Sbjct: 244 HF-PSVTAENLLMH-LREKLFLATLSVIVNEDTVVPIVRPNDTAFQAAKLMLRERMSAVM 301
Query: 180 VTVE-NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDG 238
V E ++ GI+TSKD++ RV++ ++ + V VMT NP AT DT I++ LH MH+G
Sbjct: 302 VCNEADEMIGIMTSKDLMRRVVALDVDSSKCHVSSVMTTNPYTATKDTTILETLHSMHNG 361
Query: 239 KFLHLPVVDRD-GDVVDVVDVIHITHAAV 266
+FLH+PV+D +V ++DV+ +T V
Sbjct: 362 QFLHVPVLDSSKKKLVGLLDVLQVTRGVV 390
>gi|425769641|gb|EKV08130.1| hypothetical protein PDIP_69880 [Penicillium digitatum Pd1]
gi|425771276|gb|EKV09724.1| hypothetical protein PDIG_60470 [Penicillium digitatum PHI26]
Length = 613
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 110/268 (41%), Positives = 164/268 (61%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD N + GI T KD+A RV+ L E V+++MT+NP +DT A
Sbjct: 72 MAAKREDCVLVTDDNERIAGIFTAKDLAFRVVGMGLKAREVSVAEIMTKNPLCARTDTSA 131
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 132 TDALDLMVRKGFRHLPVMDENQDISGVLDITKCFYDAMEKLERAYSSSRKLYDALEGVQT 191
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E LR +M P+L T++ + VT+S TV A M E +
Sbjct: 192 ELGSS--QPQQVIQYVEALRSKMSGPTLETVL-DGLPPVTVSVRTTVKDAAALMKENHTT 248
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKDI++RVI+ L + V +VMTP+P+ A D I AL MH
Sbjct: 249 ALLVQDQGSITGIFTSKDIVLRVIAPGLDPSTCSVVRVMTPHPDFAPSDMSIQAALRKMH 308
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 309 DGHYLNLPVMNEGGEIVGMVDVLKLTYA 336
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ALL+ D ++ GI T KDI RVIA L+ V +VMT +P F SD
Sbjct: 242 MKENHTTALLVQDQGSI-TGIFTSKDIVLRVIAPGLDPSTCSVVRVMTPHPDFAPSDMSI 300
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLY---DAIARMERAAEKGKA 109
AL+KM G + +LPV+ E GE++ ++D+ K Y + I M E+G A
Sbjct: 301 QAALRKMHDGHYLNLPVMNEGGEIVGMVDVLKLTYATLEQINNMSTQDEEGPA 353
>gi|405119601|gb|AFR94373.1| CBS and PB1 domain-containing protein [Cryptococcus neoformans var.
grubii H99]
Length = 813
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 115/286 (40%), Positives = 166/286 (58%), Gaps = 23/286 (8%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D L GI T KD+A RV A L+ T V+++MT+NP T A
Sbjct: 217 AAKRADCVLVVDEEEGLSGIFTAKDLAFRVTAEGLDPRSTSVAQIMTKNPMVTRDTTNAT 276
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EALQ MV FRHLPV E+G+V+ LLDI K ++A+A++ER + ++AA+ GV+
Sbjct: 277 EALQLMVSRGFRHLPVCNEDGDVVGLLDITKVFHEALAKVERGSTATNQLSAALAGVQSE 336
Query: 121 WGTSIS-GPNT-----FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELR 174
G ++ P ++ETLRERM P L+T+I +S T++P TV A + M E R
Sbjct: 337 LGPGLNHNPQAAAMLAYVETLRERMALPDLTTVIDTRSAPPTVTPRTTVREAARLMKERR 396
Query: 175 LSSAVVTVEN----------------KPRGILTSKDILMRVISQNLPADSTLVEKVMTPN 218
++ V N K GI TSKDI++RVI+ L A V +VMTP+
Sbjct: 397 TTAVCVMEANAGTSAVSGVSGGNVIPKIAGIFTSKDIVLRVIAAGLDASRCSVVRVMTPH 456
Query: 219 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
P+ A + DAL MH+G +L+LPVV+ DG ++ +VDV+ +T+A
Sbjct: 457 PDTAPPTMVVQDALKKMHNGHYLNLPVVEADGRLIGIVDVLKLTYA 502
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRV 199
RPS + +PE V D + K + L VV E GI T+KD+ RV
Sbjct: 195 LRPSPALTVPEGMSVA-----DASQLCAAKRADCVL---VVDEEEGLSGIFTAKDLAFRV 246
Query: 200 ISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVI 259
++ L ST V ++MT NP T +AL +M F HLPV + DGDVV ++D+
Sbjct: 247 TAEGLDPRSTSVAQIMTKNPMVTRDTTNATEALQLMVSRGFRHLPVCNEDGDVVGLLDIT 306
Query: 260 HITHAAVA 267
+ H A+A
Sbjct: 307 KVFHEALA 314
>gi|321255198|ref|XP_003193342.1| hypothetical protein CGB_D1880W [Cryptococcus gattii WM276]
gi|317459812|gb|ADV21555.1| Hypothetical protein CGB_D1880W [Cryptococcus gattii WM276]
Length = 803
Score = 190 bits (482), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 115/286 (40%), Positives = 166/286 (58%), Gaps = 23/286 (8%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D L GI T KD+A RV A L+ T V+++MT+NP T A
Sbjct: 207 AAKRADCVLVVDEEEGLSGIFTAKDLAFRVTAEGLDPRSTNVAQIMTKNPMVTRDTTNAT 266
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EALQ MV FRHLPV E+G+V+ LLDI K ++A+A++ER + ++AA+ GV+
Sbjct: 267 EALQLMVSRGFRHLPVCNEDGDVVGLLDITKVFHEALAKVERGSTATNQLSAALAGVQSE 326
Query: 121 WGTSIS-GPNT-----FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELR 174
G ++ P ++ETLRERM P L+T+I +S T++P TV A + M E R
Sbjct: 327 LGPGLNHNPQAAAMLAYVETLRERMALPDLTTVIDTRSAPPTVTPRTTVREAARLMKERR 386
Query: 175 LSSAVVTVEN----------------KPRGILTSKDILMRVISQNLPADSTLVEKVMTPN 218
++ V N K GI TSKDI++RVI+ L A V +VMTP+
Sbjct: 387 TTAVCVMEANAGTSAVSGVSGGNVIPKIAGIFTSKDIVLRVIAAGLDASRCSVVRVMTPH 446
Query: 219 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
P+ A + DAL MH+G +L+LPVV+ DG ++ +VDV+ +T+A
Sbjct: 447 PDTAPPTMVVQDALKKMHNGHYLNLPVVEADGRLIGIVDVLKLTYA 492
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRV 199
RPS + +PE V D + K + L VV E GI T+KD+ RV
Sbjct: 185 LRPSPALTVPEGMSVA-----DASQLCAAKRADCVL---VVDEEEGLSGIFTAKDLAFRV 236
Query: 200 ISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVI 259
++ L ST V ++MT NP T +AL +M F HLPV + DGDVV ++D+
Sbjct: 237 TAEGLDPRSTNVAQIMTKNPMVTRDTTNATEALQLMVSRGFRHLPVCNEDGDVVGLLDIT 296
Query: 260 HITHAAVA 267
+ H A+A
Sbjct: 297 KVFHEALA 304
>gi|255935165|ref|XP_002558609.1| Pc13g01640 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583229|emb|CAP91233.1| Pc13g01640 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 615
Score = 190 bits (482), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 110/268 (41%), Positives = 164/268 (61%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD N + GI T KD+A RV+ L E V+++MT+NP +DT A
Sbjct: 72 MAAKREDCVLVTDDNERIAGIFTAKDLAFRVVGLGLKAREVSVAEIMTKNPLCARTDTSA 131
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 132 TDALDLMVRKGFRHLPVMDENQDISGVLDITKCFYDAMEKLERAYSSSRKLYDALEGVQT 191
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E LR +M P+L T++ + VT+S TV A M E +
Sbjct: 192 ELGSS--QPQQVIQYVEALRSKMSGPTLETVL-DGLPPVTVSVRTTVKDAAALMKENHTT 248
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKDI++RVI+ L + V +VMTP+P+ A D I AL MH
Sbjct: 249 ALLVQDQGSITGIFTSKDIVLRVIAPGLDPSTCSVVRVMTPHPDFAPSDMSIQAALRKMH 308
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 309 DGHYLNLPVMNEGGEIVGMVDVLKLTYA 336
>gi|392571726|gb|EIW64898.1| CBS-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 698
Score = 189 bits (481), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 114/279 (40%), Positives = 163/279 (58%), Gaps = 17/279 (6%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D + L GI T KD+A RV A L+ TPVS +MTRNP T A
Sbjct: 106 AAKRTDCVLVVDDDEGLSGIFTAKDLAYRVSAEGLDPHITPVSTIMTRNPMVTRDTTSAT 165
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EALQ MV FRHLPV E G V+ LLDI K ++A+ ++ER++ + + +A+ GV+
Sbjct: 166 EALQLMVTKHFRHLPVCNEEGNVVGLLDITKVFHEALDKVERSSSASEKLYSALAGVQSE 225
Query: 121 WGTSISGPN-------TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLEL 173
G+ + G N +++E LRE+ P L+TI+ +++ T+ P TV K M E
Sbjct: 226 LGSGL-GANPQAAAMLSYVEALREKTALPDLTTIMDSRTQPATVGPKTTVREVAKLMKER 284
Query: 174 RLSSAVVTVENKPR--------GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATID 225
R ++ V P GI TSKDI++RVI+ L A V +VMTP+P+ A
Sbjct: 285 RTTAVCVMEPAAPGQPGAAKIAGIFTSKDIVLRVIAAGLDATRCSVVRVMTPHPDTAPPT 344
Query: 226 TPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
I DAL MH+G +L+LPVV+ DG +V +VDV+ +T+A
Sbjct: 345 LTIHDALKKMHNGHYLNLPVVEADGRLVAIVDVLKLTYA 383
>gi|449550757|gb|EMD41721.1| hypothetical protein CERSUDRAFT_110295 [Ceriporiopsis subvermispora
B]
Length = 704
Score = 189 bits (481), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 114/278 (41%), Positives = 162/278 (58%), Gaps = 15/278 (5%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D + L GI T KD+A RV A L+ T VS +MTRNP T A
Sbjct: 129 AAKRTDCVLVVDDDEGLSGIFTAKDLAYRVTAEGLDPHTTQVSTIMTRNPMVTRDTTSAT 188
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EALQ MVQ FRHLPV E G V+ LLDI K ++A+ ++ER++ + + +A+ GV+
Sbjct: 189 EALQLMVQRHFRHLPVCNEEGNVVGLLDITKVFHEALDKVERSSSASEKLYSALAGVQSE 248
Query: 121 WGTSIS-GPN-----TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELR 174
G +S P +++E LRE+ P L++I+ +++ T+ P TV K M E R
Sbjct: 249 LGGGLSTNPQAAAMLSYVEALREKTALPDLTSIMDSRTQPATVGPKTTVREVAKLMKERR 308
Query: 175 L--------SSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDT 226
S A +K GI TSKDI++RVI+ L A V +VMTP+P+ A T
Sbjct: 309 TTAVCVMEPSGAAPGTPSKIAGIFTSKDIVLRVIAAGLDATRCSVVRVMTPHPDTAPPTT 368
Query: 227 PIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DAL MH+G +L+LPVV+ DG +V +VDV+ +T+A
Sbjct: 369 TCHDALKKMHNGHYLNLPVVEADGRLVAIVDVLKLTYA 406
>gi|58261286|ref|XP_568053.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57230135|gb|AAW46536.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 704
Score = 189 bits (481), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 115/286 (40%), Positives = 166/286 (58%), Gaps = 23/286 (8%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D L GI T KD+A RV A L+ T V+++MT+NP T A
Sbjct: 108 AAKRADCVLVVDEEEGLSGIFTAKDLAFRVTAEGLDPRSTSVAQIMTKNPMVTRDTTNAT 167
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EALQ MV FRHLPV E+G+V+ LLDI K ++A+A++ER + ++AA+ GV+
Sbjct: 168 EALQLMVSRGFRHLPVCNEDGDVVGLLDITKVFHEALAKVERGSTATSQLSAALAGVQSE 227
Query: 121 WGTSIS-GPNT-----FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELR 174
G ++ P ++ETLRERM P L+T+I +S T++P TV A + M E R
Sbjct: 228 LGPGLNHNPQAAAMLAYVETLRERMALPDLTTVIDTRSAPPTVTPRTTVREAARLMKERR 287
Query: 175 LSSAVVTVEN----------------KPRGILTSKDILMRVISQNLPADSTLVEKVMTPN 218
++ V N K GI TSKDI++RVI+ L A V +VMTP+
Sbjct: 288 TTAVCVMEANAGTSAVSGVSGGNVVPKIAGIFTSKDIVLRVIAAGLDASRCSVVRVMTPH 347
Query: 219 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
P+ A + DAL MH+G +L+LPVV+ DG ++ +VDV+ +T+A
Sbjct: 348 PDTAPPTMVVQDALKKMHNGHYLNLPVVEADGRLIGIVDVLKLTYA 393
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRV 199
RPS + +PE V D + K + L VV E GI T+KD+ RV
Sbjct: 86 LRPSPALTVPEGMSVA-----DASQLCAAKRADCVL---VVDEEEGLSGIFTAKDLAFRV 137
Query: 200 ISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVI 259
++ L ST V ++MT NP T +AL +M F HLPV + DGDVV ++D+
Sbjct: 138 TAEGLDPRSTSVAQIMTKNPMVTRDTTNATEALQLMVSRGFRHLPVCNEDGDVVGLLDIT 197
Query: 260 HITHAAVA 267
+ H A+A
Sbjct: 198 KVFHEALA 205
>gi|58261288|ref|XP_568054.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57230136|gb|AAW46537.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 831
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/286 (40%), Positives = 166/286 (58%), Gaps = 23/286 (8%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D L GI T KD+A RV A L+ T V+++MT+NP T A
Sbjct: 235 AAKRADCVLVVDEEEGLSGIFTAKDLAFRVTAEGLDPRSTSVAQIMTKNPMVTRDTTNAT 294
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EALQ MV FRHLPV E+G+V+ LLDI K ++A+A++ER + ++AA+ GV+
Sbjct: 295 EALQLMVSRGFRHLPVCNEDGDVVGLLDITKVFHEALAKVERGSTATSQLSAALAGVQSE 354
Query: 121 WGTSIS-GPNT-----FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELR 174
G ++ P ++ETLRERM P L+T+I +S T++P TV A + M E R
Sbjct: 355 LGPGLNHNPQAAAMLAYVETLRERMALPDLTTVIDTRSAPPTVTPRTTVREAARLMKERR 414
Query: 175 LSSAVVTVEN----------------KPRGILTSKDILMRVISQNLPADSTLVEKVMTPN 218
++ V N K GI TSKDI++RVI+ L A V +VMTP+
Sbjct: 415 TTAVCVMEANAGTSAVSGVSGGNVVPKIAGIFTSKDIVLRVIAAGLDASRCSVVRVMTPH 474
Query: 219 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
P+ A + DAL MH+G +L+LPVV+ DG ++ +VDV+ +T+A
Sbjct: 475 PDTAPPTMVVQDALKKMHNGHYLNLPVVEADGRLIGIVDVLKLTYA 520
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRV 199
RPS + +PE V D + K + L VV E GI T+KD+ RV
Sbjct: 213 LRPSPALTVPEGMSVA-----DASQLCAAKRADCVL---VVDEEEGLSGIFTAKDLAFRV 264
Query: 200 ISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVI 259
++ L ST V ++MT NP T +AL +M F HLPV + DGDVV ++D+
Sbjct: 265 TAEGLDPRSTSVAQIMTKNPMVTRDTTNATEALQLMVSRGFRHLPVCNEDGDVVGLLDIT 324
Query: 260 HITHAAVA 267
+ H A+A
Sbjct: 325 KVFHEALA 332
>gi|134115681|ref|XP_773554.1| hypothetical protein CNBI1680 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256180|gb|EAL18907.1| hypothetical protein CNBI1680 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 831
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/286 (40%), Positives = 166/286 (58%), Gaps = 23/286 (8%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D L GI T KD+A RV A L+ T V+++MT+NP T A
Sbjct: 235 AAKRADCVLVVDEEEGLSGIFTAKDLAFRVTAEGLDPRSTSVAQIMTKNPMVTRDTTNAT 294
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EALQ MV FRHLPV E+G+V+ LLDI K ++A+A++ER + ++AA+ GV+
Sbjct: 295 EALQLMVSRGFRHLPVCNEDGDVVGLLDITKVFHEALAKVERGSTATSQLSAALAGVQSE 354
Query: 121 WGTSIS-GPNT-----FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELR 174
G ++ P ++ETLRERM P L+T+I +S T++P TV A + M E R
Sbjct: 355 LGPGLNHNPQAAAMLAYVETLRERMALPDLTTVIDTRSAPPTVTPRTTVREAARLMKERR 414
Query: 175 LSSAVVTVEN----------------KPRGILTSKDILMRVISQNLPADSTLVEKVMTPN 218
++ V N K GI TSKDI++RVI+ L A V +VMTP+
Sbjct: 415 TTAVCVMEANAGTSAVSGVSGGNVVPKIAGIFTSKDIVLRVIAAGLDASRCSVVRVMTPH 474
Query: 219 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
P+ A + DAL MH+G +L+LPVV+ DG ++ +VDV+ +T+A
Sbjct: 475 PDTAPPTMVVQDALKKMHNGHYLNLPVVEADGRLIGIVDVLKLTYA 520
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRV 199
RPS + +PE V D + K + L VV E GI T+KD+ RV
Sbjct: 213 LRPSPALTVPEGMSVA-----DASQLCAAKRADCVL---VVDEEEGLSGIFTAKDLAFRV 264
Query: 200 ISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVI 259
++ L ST V ++MT NP T +AL +M F HLPV + DGDVV ++D+
Sbjct: 265 TAEGLDPRSTSVAQIMTKNPMVTRDTTNATEALQLMVSRGFRHLPVCNEDGDVVGLLDIT 324
Query: 260 HITHAAVA 267
+ H A+A
Sbjct: 325 KVFHEALA 332
>gi|328854683|gb|EGG03814.1| hypothetical protein MELLADRAFT_117255 [Melampsora larici-populina
98AG31]
Length = 720
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/277 (40%), Positives = 165/277 (59%), Gaps = 13/277 (4%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D + LCGI T KD+A RVI L+ T VS++MT+NP T A
Sbjct: 116 AAKRTDCVLVVDEDEHLCGIFTAKDLAFRVIGDGLDPRSTLVSEIMTKNPMVTRDTTSAT 175
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EAL MV FRHLPV E G+VI LLDI K ++++ ++ERA + + A+EGV+
Sbjct: 176 EALTTMVTRGFRHLPVCNEEGDVIGLLDITKVFHESLEKLERAYGSSQKLYNAIEGVQSE 235
Query: 121 WG-----TSISGPN---TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLE 172
+G T I+ PN ++E LR++M P L +I+ ++ T+ +V A K M +
Sbjct: 236 FGGSSNATHINQPNPLMAYVEALRDKMSFPDLGSILDARTTAATVGVKTSVKEAAKLMRD 295
Query: 173 LRLSSAVVTVENKPR---GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIV 229
++AV +EN + GI TSKD+++RVI+ L A + V +VMTP+P+ A I
Sbjct: 296 HH-TTAVCVMENDGKKIAGIFTSKDVVLRVIAAGLDARTCSVVRVMTPHPDTALPSLSIQ 354
Query: 230 DALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
+AL MHDG +L+LPVVD G + VDV+ +T+A +
Sbjct: 355 EALRKMHDGHYLNLPVVDEAGQLQGCVDVLKLTYATL 391
>gi|443926166|gb|ELU44888.1| CBS and PB1 domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 566
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/277 (40%), Positives = 168/277 (60%), Gaps = 14/277 (5%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D L GI T KD+A RV A L+ TPVS++MTR P T A
Sbjct: 117 AAKRTDCVLVVDDEEGLSGIFTAKDLAFRVSAEGLDPRTTPVSQIMTRGPMVTRDTTSAT 176
Query: 62 EALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EALQ MVQ FRHLPV + G V+ LLDI K ++A+ ++ER + + AA+EGV+
Sbjct: 177 EALQLMVQRGFRHLPVCNDEGNVVGLLDITKVFHEALEKLERGSSASAKLHAALEGVQSE 236
Query: 121 WGTSISGPN-----TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRL 175
G ++ P +++ +LRE+ P L+T++ +++ T+SP TV A K M E R
Sbjct: 237 LGNGLN-PQAMAMMSYVASLREKTTLPDLTTVMDSRTQPATVSPRSTVRDAAKLMKENR- 294
Query: 176 SSAVVTVE----NKPR--GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIV 229
++AV +E P+ GI TSKD+++RVI+ L + V +VMTP+P+ A +
Sbjct: 295 TTAVCIMEPLQGGPPKIAGIFTSKDVVLRVIAAGLDPNRCSVVRVMTPHPDVAEPSMTVH 354
Query: 230 DALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
DAL M+ G++L+LPVV+ DG +V +VDV+ +T+A +
Sbjct: 355 DALKKMYVGRYLNLPVVEGDGKLVAIVDVLKLTYATL 391
>gi|299755073|ref|XP_001828409.2| CBS and PB1 domain-containing protein [Coprinopsis cinerea
okayama7#130]
gi|298411057|gb|EAU93401.2| CBS and PB1 domain-containing protein [Coprinopsis cinerea
okayama7#130]
Length = 719
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 113/277 (40%), Positives = 162/277 (58%), Gaps = 15/277 (5%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D L GI T KD+A RV A L+ TPV+++MTRNP T A
Sbjct: 145 AAKRTDCVLVVDEEEGLSGIFTAKDLAYRVTAEGLDPHSTPVAQIMTRNPMVTRDTTSAT 204
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EALQ MV FRHLPV E+G V+ LLDI K ++A+ ++ER++ + + A+ GV+
Sbjct: 205 EALQLMVSRHFRHLPVCNEDGNVVGLLDITKVFHEALGKVERSSAASEQLFNAMAGVQSE 264
Query: 121 WGTSISGPNT-----FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRL 175
G S P + E LRE+ P L+T++ ++ T+ P TV K M E R
Sbjct: 265 LGGVGSNPQAAAMLAWAEKLREKTALPDLTTVMDSRTHPATVGPKTTVRDVAKLMKERR- 323
Query: 176 SSAVVTVEN------KPR--GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTP 227
++AV +E PR GI TSKD+++RVI+ L A V +VMTP+P+ A
Sbjct: 324 TTAVCVMEPPGPGTPHPRIAGIFTSKDVVLRVIAAGLDAGRCSVVRVMTPHPDTAPPTMT 383
Query: 228 IVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
+ DAL MH+G +L+LPVV+ DG +V +VDV+ +T+A
Sbjct: 384 VHDALKKMHNGHYLNLPVVEEDGRLVAIVDVLKLTYA 420
>gi|361127748|gb|EHK99707.1| putative Meiotically up-regulated gene 70 protein [Glarea
lozoyensis 74030]
Length = 698
Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 106/269 (39%), Positives = 170/269 (63%), Gaps = 9/269 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + +S++MT+NP +DT A
Sbjct: 123 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIKASNVMISEIMTKNPLCARTDTSA 182
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 183 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 242
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G++ P ++E LR +M P+L +++ + VT+S +V A KM E +
Sbjct: 243 ELGSTQ--PQQIIQYVEALRSKMSGPTLESVL-DGRPPVTVSVRTSVKEAAAKMKENHTT 299
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNL-PADSTLVEKVMTPNPECATIDTPIVDALHIM 235
+ +V ++ GI TSKD+++RVI+ L PA+ ++V +VMTP+P+ A +D I AL M
Sbjct: 300 AVLVQDQDSITGIFTSKDVVLRVIAPGLDPANCSVV-RVMTPHPDFAPMDMSIQAALRKM 358
Query: 236 HDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
HDG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 359 HDGHYLNLPVMNEGGEIVGMVDVLKLTYA 387
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 82/168 (48%), Gaps = 7/168 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M A+L+ D +++ GI T KD+ RVIA L+ V +VMT +P F D
Sbjct: 293 MKENHTTAVLVQDQDSI-TGIFTSKDVVLRVIAPGLDPANCSVVRVMTPHPDFAPMDMSI 351
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLY---DAIARMERAAEKGKAIAAAVEG 116
AL+KM G + +LPV+ E GE++ ++D+ K Y + I M +G A
Sbjct: 352 QAALRKMHDGHYLNLPVMNEGGEIVGMVDVLKLTYATLEQINTMSTGDSEGPAWGKFWMA 411
Query: 117 VEKHWGTSISGPNTFIETLRER-MFRPSLSTIIPEKSKVVTISPTDTV 163
+E + +SG + T R + P LS E++ V+++P D+
Sbjct: 412 LENETESIMSGEGSHHHTTGGRSLMSPDLSRGH-ERTVDVSVAPGDSA 458
>gi|395334117|gb|EJF66493.1| CBS-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 717
Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 114/278 (41%), Positives = 162/278 (58%), Gaps = 15/278 (5%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D + L GI T KD+A RV A L+ T VS +MTRNP T A
Sbjct: 129 AAKRTDCVLVVDDDEGLSGIFTAKDLAYRVTAEGLDPHTTQVSVIMTRNPMVTRDTTSAT 188
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EALQ MVQ FRHLPV E G V+ LLDI K ++A+ ++ER++ + + +A+ GV+
Sbjct: 189 EALQLMVQKHFRHLPVCNEEGNVVGLLDITKVFHEALDKVERSSSASEKLYSALAGVQSE 248
Query: 121 WGTSI-SGPN-----TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELR 174
G + S P +++E LRE+ P L+T++ +++ T+ P TV K M E R
Sbjct: 249 LGAGLGSNPQAAAMLSYVEALREKTALPDLTTVMDSRTQPATVGPKTTVREVAKLMKERR 308
Query: 175 LSSAVV--------TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDT 226
++ V T K GI TSKDI++RVI+ L A V +VMTP+P+ A
Sbjct: 309 TTAVCVMEPAAPGHTTAAKIAGIFTSKDIVLRVIAAGLDATRCSVVRVMTPHPDTAPPTM 368
Query: 227 PIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
I DAL MH G +L+LPVV+ DG +V +VDV+ +T+A
Sbjct: 369 TIHDALKKMHIGHYLNLPVVEADGRLVAIVDVLKLTYA 406
>gi|409083070|gb|EKM83427.1| hypothetical protein AGABI1DRAFT_81204 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 652
Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 109/269 (40%), Positives = 157/269 (58%), Gaps = 6/269 (2%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D L GI T KD+A RV A L+ TPV+++MTRNP T A
Sbjct: 88 AAKRTDCVLVVDDEEGLSGIFTAKDLAYRVTAESLDPHTTPVNQIMTRNPMVTRDTTSAT 147
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EALQ MV FRHLPV E+G V+ LLDI K ++A+ ++ER++ + + A+ GV+
Sbjct: 148 EALQLMVSRHFRHLPVCNEDGNVVGLLDITKVFHEALDKVERSSAASEQLFNAMAGVQTE 207
Query: 121 WGTSISGPNT-----FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRL 175
G S P + E LR++ P L+TI+ ++ T+ P V K M E R
Sbjct: 208 LGAVGSNPQATAMLAWAEKLRQKTALPDLTTIMDSRTDPATVGPKTNVREVAKLMKERRT 267
Query: 176 SSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIM 235
++ V + GI TSKD+++RVI+ L A+ V +VMTP+P+ A + DAL M
Sbjct: 268 TAVCVIEGGRIVGIFTSKDVVLRVIAAGLDANRCSVIRVMTPHPDTAPPTMTVHDALKKM 327
Query: 236 HDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
H G +L+LPVV+ DG +V VVDV+ +T+A
Sbjct: 328 HIGHYLNLPVVEEDGSLVAVVDVLKLTYA 356
>gi|331220075|ref|XP_003322713.1| hypothetical protein PGTG_04250 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309301703|gb|EFP78294.1| hypothetical protein PGTG_04250 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 746
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 110/277 (39%), Positives = 160/277 (57%), Gaps = 13/277 (4%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D + LCGI T KD+A RVI ++ TPVS +MTRNP T A
Sbjct: 153 AAKRTDCVLVVDEDEHLCGIFTAKDLAFRVIGDGMDPRTTPVSAIMTRNPMVTRDTTSAT 212
Query: 62 EALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EAL MV FRHLPV + G+VI LLDI K ++++ ++ERA + + A+EGV+
Sbjct: 213 EALTTMVTRGFRHLPVCNDEGDVIGLLDITKVFHESLEKLERAYGSSQKLYNAIEGVQSE 272
Query: 121 WGTSISGPN--------TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLE 172
+G+ G ++E LR +M P L +I+ ++ T+ +V A M E
Sbjct: 273 FGSGGRGTTPGAVNPLMAYVEALRNKMSFPDLGSILDARTSAATVGVKTSVKEAAVLMRE 332
Query: 173 LRLSSAVVTVENKPR---GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIV 229
++AV +E+ R GI TSKDI++RVI+ L A + V +VMTP+P+ A I
Sbjct: 333 HH-TTAVCVMESDGRRIAGIFTSKDIVLRVIAAGLDARTCSVVRVMTPHPDTALPSLSIQ 391
Query: 230 DALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
+AL MHDG +L+LPVVD G + VDV+ +T+A +
Sbjct: 392 EALRKMHDGHYLNLPVVDEAGQLQGCVDVLKLTYATL 428
>gi|402220904|gb|EJU00974.1| CBS-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 683
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 173/294 (58%), Gaps = 21/294 (7%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D + L GI T KD+A RV A L+ TPVS +MTR+P T A
Sbjct: 119 AAKRTDCVLVVDDDEGLSGIFTAKDLAFRVTAEGLDPRTTPVSTIMTRSPMVTRDTTSAT 178
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+ALQ MV FRHLPV E+G V+ LLDI K ++A+ ++ER + + + +A+EGV+
Sbjct: 179 DALQLMVSRGFRHLPVCNEDGNVVGLLDITKVFHEALDKVERGSSASQKLYSALEGVQSE 238
Query: 121 WGTSISG-PNT-----FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELR 174
G +IS P ++E LR++ P L++++ +++ +SP TV A K M E R
Sbjct: 239 LGDNISANPQAAAMLAYVEALRDKTALPDLTSVMDARTRPAMVSPKTTVREAAKLMKESR 298
Query: 175 LSSAVVTVEN-----KPR--GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTP 227
+S V +EN P+ GI TSKD+++RVI+ L + V +VMTP+P+ A
Sbjct: 299 TTSVCV-MENTGATSPPKIVGIFTSKDVVLRVIAAGLEPNRCSVVRVMTPHPDVAPPTMT 357
Query: 228 IVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILLDQIMRQQAQ 281
I DAL M+ G +L+LPVV+ DG +V +VDV+ +T+A L+Q+ AQ
Sbjct: 358 IHDALKKMYTGHYLNLPVVEEDGRLVAIVDVLKLTYAT------LEQMTAMSAQ 405
>gi|170086117|ref|XP_001874282.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651834|gb|EDR16074.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 700
Score = 186 bits (473), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 110/281 (39%), Positives = 162/281 (57%), Gaps = 18/281 (6%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D L GI T KD+A RV A L+ TPVS++MTRNP T A
Sbjct: 110 AAKRTDCVLVVDDEEGLSGIFTAKDLAYRVTAEGLDPHTTPVSQIMTRNPMVTRDSTSAT 169
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EALQ MV FRHLPV E+G V+ LLDI K ++A+ ++ER++ + + +A+ GV+
Sbjct: 170 EALQLMVSRHFRHLPVCNEDGNVVGLLDITKVFHEALGKVERSSAASEQLFSAMAGVQSE 229
Query: 121 WGTSI-SGPNT-----FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELR 174
G ++ S P + E LRE+ P L+T++ +++ T+ P TV K M E R
Sbjct: 230 LGGAVGSNPQAAAMLAWAEKLREKTALPDLTTVMDSRTQPATVGPKTTVREVAKLMKERR 289
Query: 175 LSSAVVTVENKPR-----------GILTSKDILMRVISQNLPADSTLVEKVMTPNPECAT 223
++ V P GI TSKD+++RVI+ L A V +VMTP+P+ A
Sbjct: 290 TTAVCVMETAGPASPGLPAGSRIAGIFTSKDVVLRVIAAGLDAGRCSVVRVMTPHPDTAP 349
Query: 224 IDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
+ DAL MH+G +L+LPV++ DG +V +VDV+ +T+A
Sbjct: 350 PTMSVHDALKKMHNGHYLNLPVIEEDGRLVAIVDVLKLTYA 390
>gi|426201879|gb|EKV51802.1| hypothetical protein AGABI2DRAFT_190012 [Agaricus bisporus var.
bisporus H97]
Length = 698
Score = 186 bits (473), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 109/269 (40%), Positives = 157/269 (58%), Gaps = 6/269 (2%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D L GI T KD+A RV A L+ TPV+++MTRNP T A
Sbjct: 133 AAKRTDCVLVVDDEEGLSGIFTAKDLAYRVTAESLDPHTTPVNQIMTRNPMVTRDTTSAT 192
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EALQ MV FRHLPV E+G V+ LLDI K ++A+ ++ER++ + + A+ GV+
Sbjct: 193 EALQLMVSRHFRHLPVCNEDGNVVGLLDITKVFHEALDKVERSSAASEQLFNAMAGVQTE 252
Query: 121 WGTSISGPNT-----FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRL 175
G S P + E LR++ P L+TI+ ++ T+ P V K M E R
Sbjct: 253 LGAVGSNPQATAMLAWAEKLRQKTALPDLTTIMDSRTDPATVGPKTNVREVAKLMKERRT 312
Query: 176 SSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIM 235
++ V + GI TSKD+++RVI+ L A+ V +VMTP+P+ A + DAL M
Sbjct: 313 TAVCVIEGGRIVGIFTSKDVVLRVIAAGLDANRCSVIRVMTPHPDTAPPTMTVHDALKKM 372
Query: 236 HDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
H G +L+LPVV+ DG +V VVDV+ +T+A
Sbjct: 373 HIGHYLNLPVVEEDGSLVAVVDVLKLTYA 401
>gi|392577363|gb|EIW70492.1| hypothetical protein TREMEDRAFT_29142 [Tremella mesenterica DSM
1558]
Length = 769
Score = 186 bits (472), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 118/297 (39%), Positives = 170/297 (57%), Gaps = 23/297 (7%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D L GI T KD+A RV A L+ T V+++MT+NP T A
Sbjct: 172 AAKRTDCVLVVDEEEGLSGIFTAKDLAFRVTAEGLDPRVTSVAQIMTKNPMVTRDTTSAT 231
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EALQ MV FRHLPV E+G+V LLDI K ++A+A++ER + ++AA+ GV+
Sbjct: 232 EALQLMVSRGFRHLPVCNEDGDVAGLLDITKVFHEALAKVERGSNATSQLSAALAGVQTE 291
Query: 121 WGTSISG-PNT-----FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELR 174
G +IS P +++ LRE+M +P L+T+I T+SP +V A K M E R
Sbjct: 292 LGPAISANPQAAAMMAYVDALREKMAQPDLTTVIDTSLPPPTVSPRTSVRDAAKLMKERR 351
Query: 175 LS-----------SAVVTVENK---PR--GILTSKDILMRVISQNLPADSTLVEKVMTPN 218
+ SAV + PR GI TSKDI++RVI+ L A V +VMTP+
Sbjct: 352 TTAVCVMETNLGTSAVSGASGQNGLPRIAGIFTSKDIVLRVIAAGLDAQRCSVVRVMTPH 411
Query: 219 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILLDQI 275
P+ A + DAL MH+G +L+LPVV+ DG ++ +VDV+ +T+A + D+I
Sbjct: 412 PDTAPPTMVVQDALKKMHNGHYLNLPVVESDGRLIGIVDVLKLTYATLEQASSYDKI 468
>gi|358373443|dbj|GAA90041.1| CBS and PB1 domain protein [Aspergillus kawachii IFO 4308]
Length = 609
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/268 (40%), Positives = 163/268 (60%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ L E VS++MT+NP +DT A
Sbjct: 72 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGTGLKAREITVSEIMTKNPLCARTDTSA 131
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 132 TDALDLMVRKGFRHLPVMDENQDISGVLDITKCFYDAMEKLERAYSSSRKLYDALEGVQT 191
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E LR +M P+L T++ + T+S TV A M E +
Sbjct: 192 ELGSS--QPQQIIQYVEALRHKMSGPTLETVL-DGMPPTTVSVRTTVKDAAALMREHHTT 248
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKDI++RVI+ L + V +VMTP+P+ A D I AL MH
Sbjct: 249 ALLVQDQGSITGIFTSKDIVLRVIAPGLDPSTCSVVRVMTPHPDFAPSDMSIQAALRKMH 308
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 309 DGHYLNLPVMNDAGEIVGMVDVLKLTYA 336
>gi|134084625|emb|CAK97501.1| unnamed protein product [Aspergillus niger]
Length = 609
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/268 (40%), Positives = 163/268 (60%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ L E VS++MT+NP +DT A
Sbjct: 72 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGTGLKAREITVSEIMTKNPLCARTDTSA 131
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 132 TDALDLMVRKGFRHLPVMDENQDISGVLDITKCFYDAMEKLERAYSSSRKLYDALEGVQT 191
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E LR +M P+L T++ + T+S TV A M E +
Sbjct: 192 ELGSS--QPQQIIQYVEALRHKMSGPTLETVL-DGMPPTTVSVRTTVKDAAALMREHHTT 248
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKDI++RVI+ L + V +VMTP+P+ A D I AL MH
Sbjct: 249 ALLVQDQGSITGIFTSKDIVLRVIAPGLDPSTCSVVRVMTPHPDFAPSDMSIQAALRKMH 308
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 309 DGHYLNLPVMNDAGEIVGMVDVLKLTYA 336
>gi|317037370|ref|XP_001399033.2| CBS/PB1 domain-containing protein [Aspergillus niger CBS 513.88]
Length = 662
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/285 (39%), Positives = 169/285 (59%), Gaps = 13/285 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ L E VS++MT+NP +DT A
Sbjct: 125 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGTGLKAREITVSEIMTKNPLCARTDTSA 184
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 185 TDALDLMVRKGFRHLPVMDENQDISGVLDITKCFYDAMEKLERAYSSSRKLYDALEGVQT 244
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E LR +M P+L T++ + T+S TV A M E +
Sbjct: 245 ELGSS--QPQQIIQYVEALRHKMSGPTLETVL-DGMPPTTVSVRTTVKDAAALMREHHTT 301
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKDI++RVI+ L + V +VMTP+P+ A D I AL MH
Sbjct: 302 ALLVQDQGSITGIFTSKDIVLRVIAPGLDPSTCSVVRVMTPHPDFAPSDMSIQAALRKMH 361
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILLDQIMRQQAQ 281
DG +L+LPV++ G++V +VDV+ +T+A L+QI Q+
Sbjct: 362 DGHYLNLPVMNDAGEIVGMVDVLKLTYAT------LEQINTMQSH 400
>gi|350630805|gb|EHA19177.1| hypothetical protein ASPNIDRAFT_54229 [Aspergillus niger ATCC 1015]
Length = 672
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/268 (40%), Positives = 163/268 (60%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ L E VS++MT+NP +DT A
Sbjct: 125 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGTGLKAREITVSEIMTKNPLCARTDTSA 184
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 185 TDALDLMVRKGFRHLPVMDENQDISGVLDITKCFYDAMEKLERAYSSSRKLYDALEGVQT 244
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E LR +M P+L T++ + T+S TV A M E +
Sbjct: 245 ELGSS--QPQQIIQYVEALRHKMSGPTLETVL-DGMPPTTVSVRTTVKDAAALMREHHTT 301
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKDI++RVI+ L + V +VMTP+P+ A D I AL MH
Sbjct: 302 ALLVQDQGSITGIFTSKDIVLRVIAPGLDPSTCSVVRVMTPHPDFAPSDMSIQAALRKMH 361
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 362 DGHYLNLPVMNDAGEIVGMVDVLKLTYA 389
>gi|393218841|gb|EJD04329.1| CBS-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 677
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/278 (41%), Positives = 165/278 (59%), Gaps = 16/278 (5%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D L GI T KD+A RV A L+ TPVS +MTRNP T A
Sbjct: 85 AAKRTDCVLVVDEEEGLSGIFTAKDLAYRVTAEGLDPRSTPVSAIMTRNPMVTRDTTSAT 144
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EALQ MV FRHLPV E G V+ LLDI K ++A+ ++ER++ + + A+ GV+
Sbjct: 145 EALQLMVTRHFRHLPVCNEEGNVVGLLDITKVFHEALDKVERSSSASEKLYHALTGVQTE 204
Query: 121 WGTSISG-PN-----TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELR 174
G ++S P +++ LRE+ P L++++ ++ T+SP TV A K M E R
Sbjct: 205 LGPNMSANPQAAAMLAYVDALREKTALPDLTSVMDSRTHPATVSPKTTVKEAAKLMKENR 264
Query: 175 LSSAVVTVEN------KPR--GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDT 226
++AV +EN PR GI TSKDI++RVI+ L V +VMTP+P+ A
Sbjct: 265 -TTAVCVMENTGVPGAPPRIAGIFTSKDIVLRVIAAGLEPSRCSVVRVMTPHPDTAAPTM 323
Query: 227 PIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
+ DAL M++G +L+LPVV+ DG +V +VDV+ +T+A
Sbjct: 324 IVQDALKKMYNGHYLNLPVVEADGRLVAIVDVLKLTYA 361
>gi|116204175|ref|XP_001227898.1| hypothetical protein CHGG_09971 [Chaetomium globosum CBS 148.51]
gi|88176099|gb|EAQ83567.1| hypothetical protein CHGG_09971 [Chaetomium globosum CBS 148.51]
Length = 1086
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/268 (39%), Positives = 165/268 (61%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ L ++++MT+NP +DT A
Sbjct: 123 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGLKPNNVTIAEIMTKNPLCARTDTSA 182
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 183 TDALDLMVRKGFRHLPVMDENQDISGVLDITKCFYDAMEKLERAYSSSRRLYDALEGVQS 242
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
GTS P ++E LR +M P+L +++ + T+S +V A + M E +
Sbjct: 243 ELGTSQ--PQQIIQYVEALRSKMSGPTLESVL-NGTPPTTVSVRTSVKEAAQMMKENHTT 299
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +VT + GI TSKD+++RVI+ L + V +VMTP+P+ A +D I AL MH
Sbjct: 300 AILVTDQGAITGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHPDFAPMDMSIQAALRKMH 359
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 360 DGHYLNLPVMNDGGEIVGMVDVLKLTYA 387
>gi|397621002|gb|EJK66050.1| hypothetical protein THAOC_13058, partial [Thalassiosira oceanica]
Length = 1045
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/279 (39%), Positives = 162/279 (58%), Gaps = 15/279 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A++R DA ++TDSN L GI+TD D+ RV+A++L + T VS VMT NPT V + A
Sbjct: 577 LASKRGDAAIITDSNGGLAGIITDTDVTRRVVAKQLPAKSTNVSNVMTVNPTCVSMNHSA 636
Query: 61 VEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
++AL MV+ +FRHLPV + NG V+ +LDIAKCL DAI+++ERA +K + E K
Sbjct: 637 MDALVTMVENRFRHLPVTDDNGAVVGVLDIAKCLTDAISKLERAQDKS---GSGAEETAK 693
Query: 120 HWGTSISGPNTFIETLRERMF---------RPSLSTIIPEKSKVVTISPTDTVLMATKKM 170
+G + P+L +++ K + +SP T+ M
Sbjct: 694 QVANLSAGDHAAALQALLAPLLAQALGGNSSPTLRSVLAGKPSTI-VSPNSTLQTVGLMM 752
Query: 171 LELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVD 230
E R SA++ + GI KD++ RVI++ LP D+T V +VMTPNPE DT +++
Sbjct: 753 AEAR-KSALIVDGTQLVGIFGFKDMMTRVIAEELPLDTTFVSQVMTPNPESVLPDTTVLE 811
Query: 231 ALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
AL +MHD +FL LPV + +G VV +VDV+ +A+ E
Sbjct: 812 ALQLMHDNRFLTLPVCEENGQVVGLVDVMDCVYASGGAE 850
Score = 179 bits (455), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 108/280 (38%), Positives = 168/280 (60%), Gaps = 17/280 (6%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A++R DA ++TD+N L GI+TD D+ RV+A+EL+ T VS VMT NP+ V + A
Sbjct: 238 LASKRGDAAIITDTNGGLAGIITDTDVTRRVVAKELHPSTTHVSDVMTANPSCVSMSSSA 297
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+A+ M+ +FRHLPV ++ G V+ +LDIAKCL DAI+++ER+ EKG AA E ++
Sbjct: 298 TDAMLTMIDNRFRHLPVTDDSGAVVGVLDIAKCLTDAISKLERSQEKGSN--AAEEALKA 355
Query: 120 HWGTSISGPNTFIET----LRERMFR----PSLSTIIPEKSKVVTISPTDTVLMATKKML 171
G++ ++ L + F P+L +++ K + + PT ++ M
Sbjct: 356 SLGSAGGAQAAALQQLLGPLLSQAFSGQSSPTLRSVLAGKPSTI-VEPTTSIQATGCLMA 414
Query: 172 ELRLSSAVVTVENKPR--GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIV 229
E R ++ VV +K R GI KD++ R I++ P + T V +VMTPNPE + DT ++
Sbjct: 415 EARKAALVV---DKGRLVGIFGFKDMMTRAIAKEKPLEMTPVSQVMTPNPESVSPDTTVL 471
Query: 230 DALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
+AL IMHD +FL LPV + +G VV +VDV+ +A+ E
Sbjct: 472 EALQIMHDNRFLTLPVCESNGSVVGIVDVMDCVYASGGAE 511
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 136/261 (52%), Gaps = 10/261 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA R AL++ L GI KD+ TR IA+E LE TPVS+VMT NP V DT
Sbjct: 74 MAEARKAALVV--DKGRLVGIFGFKDMMTRAIAKEKPLEMTPVSQVMTPNPESVSPDTTV 131
Query: 61 VEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+EALQ M +F LPV E NG V+ ++D+ C+Y AE K+I A+ +
Sbjct: 132 LEALQIMHDNRFLTLPVCESNGSVVGIVDVMDCVY-----ASGGAEGWKSIFASAIDCDD 186
Query: 120 HWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISP-TDTVLMATKKMLELRLSSA 178
+ + T+R P ++ + K +SP TDTVL T+ + R +A
Sbjct: 187 TASVNSFQSGSVQRTVRSSKSTPKDVSVSKLRPKAPMVSPSTDTVLAVTQMLASKRGDAA 246
Query: 179 VVTVENKP-RGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHD 237
++T N GI+T D+ RV+++ L +T V VMT NP C ++ + DA+ M D
Sbjct: 247 IITDTNGGLAGIITDTDVTRRVVAKELHPSTTHVSDVMTANPSCVSMSSSATDAMLTMID 306
Query: 238 GKFLHLPVVDRDGDVVDVVDV 258
+F HLPV D G VV V+D+
Sbjct: 307 NRFRHLPVTDDSGAVVGVLDI 327
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 77/130 (59%), Gaps = 6/130 (4%)
Query: 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPR--GILTSKDILMRV 199
P+L +++ K + + PT ++ M E R ++ VV +K R GI KD++ R
Sbjct: 47 PTLRSVLAGKPSTI-VEPTTSIQATGCLMAEARKAALVV---DKGRLVGIFGFKDMMTRA 102
Query: 200 ISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVI 259
I++ P + T V +VMTPNPE + DT +++AL IMHD +FL LPV + +G VV +VDV+
Sbjct: 103 IAKEKPLEMTPVSQVMTPNPESVSPDTTVLEALQIMHDNRFLTLPVCESNGSVVGIVDVM 162
Query: 260 HITHAAVATE 269
+A+ E
Sbjct: 163 DCVYASGGAE 172
>gi|389751715|gb|EIM92788.1| CBS-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 668
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/277 (39%), Positives = 163/277 (58%), Gaps = 14/277 (5%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D L GI T KD+A R+ A ++ T VS+VMTRNP T A
Sbjct: 91 AAKRTDCVLVVDEEEGLSGIFTAKDLAYRITAEGVDPHVTAVSQVMTRNPMVTRDTTSAT 150
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EALQ MV FRHLPV E G V+ LLDI K +DA+ ++ER++ + + +A+ GV+
Sbjct: 151 EALQLMVTRNFRHLPVCNEEGNVVGLLDITKVFHDALDKVERSSSASEKLYSALAGVQTE 210
Query: 121 WGTSI-SGPNT-----FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELR 174
G I + P +++ LRE+ P L+T++ +++ T+ P TV K M E R
Sbjct: 211 LGGGIATNPQAAAMLAYVDALREKTALPDLTTVMDSRTQPATVGPKTTVKEVAKLMKERR 270
Query: 175 LSSAVV-----TVENKPR--GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTP 227
++ V + N PR GI TSKD+++RVI+ L A V +VMTP+P+ A
Sbjct: 271 TTAVCVMEGTTGINNVPRVAGIFTSKDVVLRVIAAGLDASRCSVVRVMTPHPDTAPPTMF 330
Query: 228 IVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
+ DAL MH+G +L+LPV++ DG +V +VDV+ +T+A
Sbjct: 331 VHDALKKMHNGHYLNLPVLEADGRLVAIVDVLKLTYA 367
>gi|398390317|ref|XP_003848619.1| hypothetical protein MYCGRDRAFT_76843 [Zymoseptoria tritici IPO323]
gi|339468494|gb|EGP83595.1| hypothetical protein MYCGRDRAFT_76843 [Zymoseptoria tritici IPO323]
Length = 629
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/281 (38%), Positives = 176/281 (62%), Gaps = 16/281 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ L + ++++MT+NP +DT A
Sbjct: 76 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGLKAQNVTIAEIMTKNPLCAKTDTSA 135
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA K + A+EGV+
Sbjct: 136 TDALDLMVRKGFRHLPVMDENHDISGILDITKCFYDAMEKLERAYSSSKKLYDALEGVQA 195
Query: 120 HWGTSISGPN---TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E +R+RM P+L +++ VT+S +V A + M + +
Sbjct: 196 ELGSSQ--PQQIIQYVEAVRQRMSGPTLESVL-NGLPPVTVSVRTSVKEAAQMMKDNHTT 252
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNL-PADSTLVEKVMTPNPECATIDTPIVDALHIM 235
+ +V + + GI TSKD+++RVI+ L PA+ +++ +VMTP+P+ A +D I AL M
Sbjct: 253 AVLVQDQGQITGIFTSKDVVLRVIAAGLDPANCSVI-RVMTPHPDFAPMDMSIQQALRKM 311
Query: 236 HDGKFLHLPVVDRDGD-VVDVVDVIHITHAAVATEILLDQI 275
HDG +L+LPV++++ D +V +VDV+ +T+A LDQI
Sbjct: 312 HDGHYLNLPVMNKESDEIVGMVDVLKLTYAT------LDQI 346
>gi|449304257|gb|EMD00265.1| hypothetical protein BAUCODRAFT_30741 [Baudoinia compniacensis UAMH
10762]
Length = 669
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/281 (39%), Positives = 174/281 (61%), Gaps = 16/281 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ L ++++MT+NP +DT A
Sbjct: 112 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGLKANNVTIAEIMTKNPLCAKTDTSA 171
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA K + A+EGV+
Sbjct: 172 TDALDLMVRKGFRHLPVMDENHDISGILDITKCFYDAMEKLERAYSSSKKLYDALEGVQA 231
Query: 120 HWGTSISGPN---TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E +R+RM P+L +++ T+S +V A + M E +
Sbjct: 232 ELGSSQ--PQQIIQYVEAVRQRMSGPTLESVL-NGLPPTTVSVRTSVREAAQLMKENHTT 288
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNL-PADSTLVEKVMTPNPECATIDTPIVDALHIM 235
+ +V + + GI TSKD+++RVI+ L PA+ ++V +VMTP+P+ A +D I AL M
Sbjct: 289 AVLVQDQGQITGIFTSKDVVLRVIAAGLDPANCSVV-RVMTPHPDFAPLDMSIQQALRKM 347
Query: 236 HDGKFLHLPVVDRDGD-VVDVVDVIHITHAAVATEILLDQI 275
HDG +L+LPV++++ D +V +VDV+ +T+A LDQI
Sbjct: 348 HDGHYLNLPVMNKENDEIVGMVDVLKLTYAT------LDQI 382
>gi|409051394|gb|EKM60870.1| hypothetical protein PHACADRAFT_80818, partial [Phanerochaete
carnosa HHB-10118-sp]
Length = 472
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/282 (39%), Positives = 166/282 (58%), Gaps = 20/282 (7%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D + L GI T KD+A RV A L+ TPVS +MTRNP T A
Sbjct: 84 AAKRTDCVLVVDDDEGLSGIFTAKDLAYRVTAEGLDPHTTPVSVIMTRNPMVTRDTTSAT 143
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EAL+ MV FRHLPV E G V+ LLDI + ++A+ ++ER++ + + A+ GV+
Sbjct: 144 EALELMVSRHFRHLPVCNEEGNVVGLLDITRVFHEALDKVERSSSASEKLYNALAGVQSE 203
Query: 121 WGTSI-SGPNT-----FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELR 174
G + + P T ++E LRE+ P L+T++ +++ T+ P TV K M E R
Sbjct: 204 LGGGVATNPQTAAMLSYVEALREKTALPDLTTVMDSRTEPATVGPKTTVREVAKLMKERR 263
Query: 175 LSSAVVTVEN----------KPR--GILTSKDILMRVISQNLPADSTLVEKVMTPNPECA 222
++AV +E+ PR GI TSKD+++RVI+ L A V +VMTP+P+ A
Sbjct: 264 -TTAVCVMESPSTSMGGTAATPRIAGIFTSKDVVLRVIAAGLDAGRCSVVRVMTPHPDTA 322
Query: 223 TIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
+ DAL MH+G +L+LPV++ DG ++ +VDV+ +T+A
Sbjct: 323 PPTMTVHDALKKMHNGHYLNLPVIETDGRLIAIVDVLKLTYA 364
>gi|380494191|emb|CCF33335.1| hypothetical protein CH063_05547 [Colletotrichum higginsianum]
Length = 707
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 164/268 (61%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ ++++MT+NP +DT A
Sbjct: 150 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGQKPNHITIAEIMTKNPLCARTDTSA 209
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 210 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRRLYDALEGVQS 269
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
GTS P ++E LR +M P+L +++ + T+S +V A + M E R +
Sbjct: 270 ELGTSQ--PQQIIQYVEALRSKMSGPTLESVL-DGRPPTTVSVRTSVKEAAQMMKENRTT 326
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A +D I AL MH
Sbjct: 327 AVLVQDQGAITGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHPDFAPMDMSIQAALRKMH 386
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 387 DGHYLNLPVMNDGGEIVGMVDVLKLTYA 414
>gi|67539092|ref|XP_663320.1| hypothetical protein AN5716.2 [Aspergillus nidulans FGSC A4]
gi|40743619|gb|EAA62809.1| hypothetical protein AN5716.2 [Aspergillus nidulans FGSC A4]
gi|259484807|tpe|CBF81345.1| TPA: CBS and PB1 domain protein (AFU_orthologue; AFUA_1G06780)
[Aspergillus nidulans FGSC A4]
Length = 666
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/268 (39%), Positives = 163/268 (60%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ L + VS++MT+NP +DT A
Sbjct: 132 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGLKARDITVSEIMTKNPLCARTDTSA 191
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 192 TDALDLMVRKGFRHLPVMDENQDISGVLDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 251
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E LR +M P+L +++ + T+S TV A M E +
Sbjct: 252 ELGSS--QPQQIIQYVEALRSKMSGPTLESVL-DGMPPTTVSVRTTVKEAAALMKEHHTT 308
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKDI++RVI+ L + V +VMTP+P+ A D I AL MH
Sbjct: 309 ALLVQDQGSITGIFTSKDIVLRVIAPGLDPATCSVVRVMTPHPDFAPSDMSIQAALRKMH 368
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 369 DGHYLNLPVMNEGGEIVGMVDVLKLTYA 396
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ALL+ D ++ GI T KDI RVIA L+ V +VMT +P F SD
Sbjct: 302 MKEHHTTALLVQDQGSI-TGIFTSKDIVLRVIAPGLDPATCSVVRVMTPHPDFAPSDMSI 360
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLY---DAIARMERAAEKGKAIAAAVEG 116
AL+KM G + +LPV+ E GE++ ++D+ K Y + I M ++G A
Sbjct: 361 QAALRKMHDGHYLNLPVMNEGGEIVGMVDVLKLTYATLEQINSMSTQDDEGPAWNKFWLS 420
Query: 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVL 164
++ + +SG + +P S + PE K + D+VL
Sbjct: 421 MDHESDSMVSG---------SQSHQPHRSIVNPESPK-ASFDARDSVL 458
>gi|212528298|ref|XP_002144306.1| CBS/PB1 domain-containing protein [Talaromyces marneffei ATCC
18224]
gi|210073704|gb|EEA27791.1| CBS and PB1 domain protein [Talaromyces marneffei ATCC 18224]
Length = 675
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 164/268 (61%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ L E ++++MT+NP +DT A
Sbjct: 122 MAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGAGLKAREVTIAEIMTKNPLCARTDTSA 181
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 182 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 241
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E LR++M P+L +++ + T+S +V A M E +
Sbjct: 242 ELGSSQ--PQQIIQYVEALRQKMSGPTLESVL-DGMPPTTVSVRTSVKEAAALMKEHHTT 298
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A D I AL MH
Sbjct: 299 ALLVQDQGSITGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHPDFAPTDMSIQAALRKMH 358
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 359 DGHYLNLPVMNEAGEIVGMVDVLKLTYA 386
>gi|367048487|ref|XP_003654623.1| hypothetical protein THITE_136351 [Thielavia terrestris NRRL 8126]
gi|347001886|gb|AEO68287.1| hypothetical protein THITE_136351 [Thielavia terrestris NRRL 8126]
Length = 1055
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 164/268 (61%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ L ++++MT+NP +DT A
Sbjct: 119 MAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGAGLKANNVTIAEIMTKNPLCARTDTSA 178
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 179 TDALDLMVRKGFRHLPVMDENQDISGVLDITKCFYDAMEKLERAYASSRRLYDALEGVQS 238
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
GTS P ++E LR +M P+L +++ + T+S +V A + M E +
Sbjct: 239 ELGTS--QPQQIIQYVEALRSKMSGPTLESVL-NGTPPTTVSVRTSVREAAQLMKENHTT 295
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A +D I AL MH
Sbjct: 296 AVLVQDQGAITGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHPDFAPMDMSIQAALRKMH 355
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 356 DGHYLNLPVMNDSGEIVGMVDVLKLTYA 383
>gi|115389224|ref|XP_001212117.1| CBS/PB1 domain-containing protein [Aspergillus terreus NIH2624]
gi|114194513|gb|EAU36213.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 668
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 168/285 (58%), Gaps = 13/285 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ E VS++MT+NP +DT A
Sbjct: 133 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGQKAREITVSEIMTKNPLCARTDTSA 192
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 193 TDALDLMVRKGFRHLPVMDENQDISGVLDITKCFYDAMEKLERAYSSSRKLYDALEGVQT 252
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E LR +M P+L +++ + T+S +V A M E +
Sbjct: 253 ELGSS--QPQQIIQYVEALRSKMSGPTLESVL-DGMPPTTVSVRTSVKEAAALMKEHHTT 309
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKDI++RVI+ L + V +VMTP+P+ A D I AL MH
Sbjct: 310 ALLVQDQGSITGIFTSKDIVLRVIAPGLDPATCSVVRVMTPHPDFAPTDMSIQAALRKMH 369
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILLDQIMRQQAQ 281
DG +L+LPV++ G++V +VDV+ +T+A L+QI Q Q
Sbjct: 370 DGHYLNLPVMNEAGEIVGMVDVLKLTYAT------LEQINSMQTQ 408
>gi|453080833|gb|EMF08883.1| CBS-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 662
Score = 183 bits (465), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 109/281 (38%), Positives = 175/281 (62%), Gaps = 16/281 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ LN ++++MT+NP +DT A
Sbjct: 112 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGLNARNVTIAEIMTKNPLCAKTDTSA 171
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC Y+A+ ++ERA K + A+EGV+
Sbjct: 172 TDALDLMVRKGFRHLPVMDENHDISGVLDITKCFYEAMEKLERAYTSSKKLYDALEGVQA 231
Query: 120 HWGTSISGPN---TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E +R+RM P+L +++ T+S +V A + M E +
Sbjct: 232 ELGSSQ--PQQVIQYVEAVRQRMSGPTLESVL-NGLPPTTVSVRTSVKEAAQLMKENHTT 288
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNL-PADSTLVEKVMTPNPECATIDTPIVDALHIM 235
+ +V + + GI TSKD+++RVI+ L PA+ +++ +VMTP+P+ A +D I AL M
Sbjct: 289 AVLVQDQGQITGIFTSKDVVLRVIAAGLDPANCSVI-RVMTPHPDFAPMDMSIQQALRKM 347
Query: 236 HDGKFLHLPVVDRDGD-VVDVVDVIHITHAAVATEILLDQI 275
HDG +L+LPV++++ D +V +VDV+ +T+A LDQI
Sbjct: 348 HDGHYLNLPVMNKESDEIVGMVDVLKLTYAT------LDQI 382
>gi|242766797|ref|XP_002341242.1| CBS/PB1 domain-containing protein [Talaromyces stipitatus ATCC
10500]
gi|218724438|gb|EED23855.1| CBS and PB1 domain protein [Talaromyces stipitatus ATCC 10500]
Length = 674
Score = 183 bits (465), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 104/270 (38%), Positives = 165/270 (61%), Gaps = 7/270 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ L E ++++MT+NP +DT A
Sbjct: 121 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGLKAREVTIAEIMTKNPLCARTDTSA 180
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 181 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 240
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E LR++M P+L +++ + T+S +V A M E +
Sbjct: 241 ELGSS--QPQQIIQYVEALRQKMSGPTLESVL-DGMPPTTVSVRTSVKEAAALMKEHHTT 297
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A D I AL MH
Sbjct: 298 ALLVQDQGSITGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHPDFAPTDMSIQAALRKMH 357
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
DG +L+LPV++ G++V +VDV+ +T+A +
Sbjct: 358 DGHYLNLPVMNEAGEIVGMVDVLKLTYATL 387
>gi|402080513|gb|EJT75658.1| mitochondrial ribosomal protein subunit S4 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 705
Score = 183 bits (465), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 164/268 (61%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ L ++++MT+NP +DT A
Sbjct: 134 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGLKATNVTIAEIMTKNPLCARTDTSA 193
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 194 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 253
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E LR +M P+L +++ K T+ +V A + M E +
Sbjct: 254 ELGSSQ--PQQIIQYVEALRSKMSGPTLESVLNGKPPT-TVGVKTSVREAAQIMRENHTT 310
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + + GI TSKD+++RVI+ L + V +VMTP+P+ A +D I AL MH
Sbjct: 311 AVLVQDQGQITGIFTSKDVVLRVIAPGLDPGNCSVVRVMTPHPDFAPMDMSIQAALRKMH 370
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 371 DGHYLNLPVMNDAGEIVGMVDVLKLTYA 398
>gi|302418246|ref|XP_003006954.1| CBS/PB1 domain-containing protein [Verticillium albo-atrum
VaMs.102]
gi|261354556|gb|EEY16984.1| CBS domain-containing protein [Verticillium albo-atrum VaMs.102]
Length = 750
Score = 183 bits (464), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 103/270 (38%), Positives = 167/270 (61%), Gaps = 7/270 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + ++++MT+NP +DT A
Sbjct: 192 MAAKREDCVLVTDDDDRISGIFTAKDLAFRVVGAGMKPTHITIAEIMTKNPLCARTDTSA 251
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 252 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRRLYDALEGVQS 311
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E LR +M P+L +++ + T+S +V A + M E R +
Sbjct: 312 ELGSS--QPQQIIQYVEALRSKMSGPTLESVL-NGTPPTTVSVRTSVREAAQLMKENRTT 368
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A++D I AL MH
Sbjct: 369 AVLVQDQGAITGIFTSKDVVLRVIAVGLDPATCSVVRVMTPHPDFASMDMSIQAALRKMH 428
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
DG +L+LPV++ G++V +VDV+ +T+A +
Sbjct: 429 DGHYLNLPVMNDGGEIVGMVDVLKLTYATL 458
>gi|340966856|gb|EGS22363.1| putative 40S ribosomal protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1118
Score = 183 bits (464), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 105/270 (38%), Positives = 166/270 (61%), Gaps = 7/270 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ L V+++MT+NP +DT A
Sbjct: 107 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGLKATNVAVAEIMTKNPLCARTDTSA 166
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 167 TDALDLMVRKGFRHLPVMDENQDISGVLDITKCFYDAMEKLERAYASSRRLYDALEGVQS 226
Query: 120 HWGTSISGPN---TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
GTS P ++E LR +M P+L +I+ + VT++ +V A + M E +
Sbjct: 227 ELGTS--HPQHLIQYVEALRHKMSGPTLESIL-DGRPPVTVNVRTSVREAAQLMRENHTT 283
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A +D I AL MH
Sbjct: 284 AVLVQDQGAITGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHPDFAPMDMSIQAALRKMH 343
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
DG +L+LPV++ G+++ +VDV+ +T+A +
Sbjct: 344 DGHYLNLPVMNDAGEIIGMVDVLKLTYATL 373
>gi|429850172|gb|ELA25470.1| cbs and pb1 domain protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 520
Score = 183 bits (464), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 105/269 (39%), Positives = 165/269 (61%), Gaps = 8/269 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ ++++MT+NP +DT A
Sbjct: 222 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGQKPNHITIAEIMTKNPLCARTDTSA 281
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 282 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRRLYDALEGVQS 341
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
GTS P ++E LR +M P+L +++ + T+S +V A ++M E R +
Sbjct: 342 ELGTSQ--PQQIIQYVEALRHKMSGPTLESVL-DGRPPTTVSVRTSVKEAAQQMKENRTT 398
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A +D I AL MH
Sbjct: 399 AVLVQDQGAITGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHPDFAPMDMSIQAALRKMH 458
Query: 237 DGKFLHLPVVDRD-GDVVDVVDVIHITHA 264
DG +L+LPV+ D G++V +VDV+ +T+A
Sbjct: 459 DGHYLNLPVMTSDGGEIVGMVDVLKLTYA 487
>gi|336376304|gb|EGO04639.1| hypothetical protein SERLA73DRAFT_118591 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389355|gb|EGO30498.1| hypothetical protein SERLADRAFT_432066 [Serpula lacrymans var.
lacrymans S7.9]
Length = 688
Score = 183 bits (464), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 111/278 (39%), Positives = 161/278 (57%), Gaps = 15/278 (5%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D L GI T KD+A RV A L+ TPVS++MTR+P T A
Sbjct: 125 AAKRTDCVLVVDEEEGLSGIFTAKDLAYRVTADGLDPHTTPVSQIMTRSPMVTRDTTSAT 184
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+ALQ MVQ FRHLPV E G V+ LLDI K ++A+ ++ER++ + + A+ GV+
Sbjct: 185 DALQLMVQRHFRHLPVCNEEGNVVGLLDITKVFHEALNKVERSSSASEKLYNALAGVQSE 244
Query: 121 WGTSI-SGPNT-----FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELR 174
G + S P +++ LRE+ P L+T+I + T++P TV + M E R
Sbjct: 245 LGPGMTSNPQAAAMLAYVDALREKTALPDLTTVIDRCVQPATVTPKTTVREVARLMRERR 304
Query: 175 --------LSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDT 226
+AV + K GI TSKDI++RVI+ L A V +VMTP+P+ A
Sbjct: 305 TTAVCVMEFPAAVSDMFPKVVGIFTSKDIVLRVIAAGLDAGMCSVIRVMTPHPDTAQPSM 364
Query: 227 PIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
+ DAL MH+G +L+LPVVD DG ++ +VDV+ +T+A
Sbjct: 365 SVHDALKRMHNGHYLNLPVVDFDGQLMAIVDVLKLTYA 402
>gi|295659197|ref|XP_002790157.1| CBS/PB1 domain-containing protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226281862|gb|EEH37428.1| CBS and PB1 domain-containing protein [Paracoccidioides sp.
'lutzii' Pb01]
Length = 671
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 164/268 (61%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + + ++++MT+NP +DT A
Sbjct: 118 MAAKREDCVLVTDEDERIAGIFTAKDLAFRVVGAGIRARDVTIAEIMTKNPLCARTDTSA 177
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 178 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 237
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G++ P ++E LR++M P+L T++ T+S +V A M E +
Sbjct: 238 ELGSN--QPQQIIQYVEALRQKMSGPTLETVL-NGLPPTTVSVRTSVREAAALMKENHTT 294
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKDI++RVI+ L ++ V +VMTP+P+ A D I AL MH
Sbjct: 295 ALLVQDQGSITGIFTSKDIVLRVIAPGLDPNTCSVVRVMTPHPDFAPTDMSIQAALRKMH 354
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 355 DGHYLNLPVMNEAGEIVGMVDVLKLTYA 382
>gi|346979111|gb|EGY22563.1| CBS domain-containing protein [Verticillium dahliae VdLs.17]
Length = 714
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/270 (38%), Positives = 166/270 (61%), Gaps = 7/270 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + ++ +MT+NP +DT A
Sbjct: 156 MAAKREDCVLVTDDDDRISGIFTAKDLAFRVVGAGMKPTHITIADIMTKNPLCARTDTSA 215
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 216 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRRLYDALEGVQS 275
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E LR +M P+L +++ + T+S +V A + M E R +
Sbjct: 276 ELGSS--QPQQIIQYVEALRSKMSGPTLESVL-NGTPPTTVSVRTSVREAAQLMKENRTT 332
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A++D I AL MH
Sbjct: 333 AVLVQDQGAITGIFTSKDVVLRVIAVGLDPATCSVVRVMTPHPDFASMDMSIQAALRKMH 392
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
DG +L+LPV++ G++V +VDV+ +T+A +
Sbjct: 393 DGHYLNLPVMNDGGEIVGMVDVLKLTYATL 422
>gi|303316684|ref|XP_003068344.1| CBS/PB1 domain-containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|240108025|gb|EER26199.1| CBS domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 655
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/268 (38%), Positives = 164/268 (61%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + + ++++MT+NP +DT A
Sbjct: 114 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIRARDVTIAEIMTKNPLCARTDTSA 173
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 174 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 233
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E LR++M P+L +++ +T+S +V A M E +
Sbjct: 234 ELGSSQ--PQQIIQYVEALRQKMSGPTLESVL-NGLPPITVSVRTSVKDAAALMREHHTT 290
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A D I AL MH
Sbjct: 291 ALLVQDQGSITGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHPDFAPTDMSIQAALRKMH 350
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 351 DGHYLNLPVMNESGEIVGMVDVLKLTYA 378
>gi|452838321|gb|EME40262.1| hypothetical protein DOTSEDRAFT_74911 [Dothistroma septosporum
NZE10]
Length = 665
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/280 (38%), Positives = 170/280 (60%), Gaps = 14/280 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ L ++++MT+NP +DT A
Sbjct: 111 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGLKANSVTIAEIMTKNPLCANTDTSA 170
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA K + A+EGV+
Sbjct: 171 TDALDLMVRKGFRHLPVMDENHDISGVLDITKCFYDAMEKLERAYTSSKKLYDALEGVQA 230
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E +R+RM P+L +++ T+S +V A + M E +
Sbjct: 231 ELGSSQ--PQQIIQYVEAVRQRMSGPTLESVL-NGLPPTTVSVRTSVKEAAQLMKENHTT 287
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + + GI TSKD+++RVI+ L + V +VMTP+P+ A +D I AL MH
Sbjct: 288 AVLVQDQGQITGIFTSKDVVLRVIAAGLDPSTCSVIRVMTPHPDFAPLDMSIQQALRKMH 347
Query: 237 DGKFLHLPVVDRDGD-VVDVVDVIHITHAAVATEILLDQI 275
DG +L+LPV++++ D +V +VDV+ +T+A LDQI
Sbjct: 348 DGHYLNLPVMNKESDEIVGMVDVLKLTYAT------LDQI 381
>gi|320590954|gb|EFX03395.1| cbs and pb1 domain containing protein [Grosmannia clavigera kw1407]
Length = 692
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/271 (39%), Positives = 167/271 (61%), Gaps = 9/271 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ ++++MT+NP +DT A
Sbjct: 128 MAAKREDCVLVTDDDDRIAGIFTAKDLAYRVVGAGTKANSVTIAEIMTKNPLCARTDTSA 187
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 188 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 247
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
GTS P ++E LR +M P+L T++ T+S +V A + M E +
Sbjct: 248 ELGTSQ--PQQVIQYVEALRSKMSGPTLETVL-NGLPPTTVSVRTSVKEAAQLMKENHTT 304
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNL-PADSTLVEKVMTPNPECATIDTPIVDALHIM 235
+ +V + GI TSKD+++RVI+ L PA+ ++V +VMTP+P+ A +D I AL M
Sbjct: 305 AVLVQDQGAITGIFTSKDVVLRVIAPGLDPANCSVV-RVMTPHPDFAPMDMSIQAALRKM 363
Query: 236 HDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
HDG +L+LPV++ G++V +VDV+ +T+A +
Sbjct: 364 HDGHYLNLPVMNDGGEIVGMVDVLKLTYATL 394
>gi|310791950|gb|EFQ27477.1| hypothetical protein GLRG_01972 [Glomerella graminicola M1.001]
Length = 682
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 164/268 (61%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ ++++MT+NP +DT A
Sbjct: 125 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGQKPSHITIAEIMTKNPLCARTDTSA 184
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 185 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRRLYDALEGVQS 244
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
GTS P ++E LR +M P+L +++ + T+S +V A + M + R +
Sbjct: 245 ELGTSQ--PQQIIQYVEALRSKMSGPTLESVL-DGRPPTTVSVRTSVREAAQMMKDNRTT 301
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A +D I AL MH
Sbjct: 302 AVLVQDQGAITGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHPDFAPMDMSIQAALRKMH 361
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 362 DGHYLNLPVMNDGGEIVGMVDVLKLTYA 389
>gi|407923859|gb|EKG16922.1| Phox/Bem1p [Macrophomina phaseolina MS6]
Length = 663
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/284 (37%), Positives = 169/284 (59%), Gaps = 13/284 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + + ++++MT+NP +DT A
Sbjct: 110 MAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGAGIKARDITIAEIMTKNPLCAKTDTSA 169
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 170 TDALDLMVRKGFRHLPVMDENHDIAGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQA 229
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E +R +M P+L +++ T+S +V A + M E +
Sbjct: 230 ELGSSQ--PQQVIQYVEAIRAKMSGPTLESVL-TGLPPTTVSVRTSVKEAAQLMKENHTT 286
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A ID I AL MH
Sbjct: 287 AVLVQDQGSITGIFTSKDVVLRVIAAGLDPGTCSVVRVMTPHPDFAPIDMSIQAALRKMH 346
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILLDQIMRQQA 280
DG +L+LPV+ G++V +VDV+ +T+A LDQI Q+
Sbjct: 347 DGHYLNLPVMSEAGEIVGMVDVLKLTYAT------LDQINTMQS 384
>gi|320038151|gb|EFW20087.1| CBS and PB1 domain-containing protein [Coccidioides posadasii str.
Silveira]
Length = 655
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/268 (38%), Positives = 164/268 (61%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + + ++++MT+NP +DT A
Sbjct: 114 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIRARDVTIAEIMTKNPLCARTDTSA 173
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 174 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 233
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E LR++M P+L +++ +T+S +V A M E +
Sbjct: 234 ELGSSQ--PQQIIQYVEALRQKMSGPTLESVL-NGLPPITVSVRTSVKDAAALMREHHTT 290
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A D I AL MH
Sbjct: 291 ALLVQDQGSITGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHPDFAPTDMSIQAALRKMH 350
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 351 DGHYLNLPVMNESGEIVGMVDVLKLTYA 378
>gi|317142635|ref|XP_001818994.2| CBS/PB1 domain-containing protein [Aspergillus oryzae RIB40]
Length = 666
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/268 (39%), Positives = 163/268 (60%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + V+++MT+NP +DT A
Sbjct: 128 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGQKARDITVAEIMTKNPLCARTDTSA 187
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 188 TDALDLMVRKGFRHLPVMDENQDISGVLDITKCFYDAMEKLERAYSSSRKLYDALEGVQT 247
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E LR +M P+L T++ + VT+S +V A M E +
Sbjct: 248 ELGSS--QPQQIIQYVEALRSKMSGPTLETVL-DGLPPVTVSVRTSVKDAAAMMKEHHTT 304
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKDI++RVI+ L + V +VMTP+P+ A D I AL MH
Sbjct: 305 ALLVQDQGSITGIFTSKDIVLRVIAPGLDPSTCSVVRVMTPHPDFAPADMSIQAALRKMH 364
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 365 DGHYLNLPVMNETGEIVGMVDVLKLTYA 392
>gi|238501480|ref|XP_002381974.1| CBS/PB1 domain-containing protein [Aspergillus flavus NRRL3357]
gi|220692211|gb|EED48558.1| CBS and PB1 domain protein [Aspergillus flavus NRRL3357]
gi|391863760|gb|EIT73059.1| CBS and PB1 domain protein [Aspergillus oryzae 3.042]
Length = 666
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/268 (39%), Positives = 163/268 (60%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + V+++MT+NP +DT A
Sbjct: 128 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGQKARDITVAEIMTKNPLCARTDTSA 187
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 188 TDALDLMVRKGFRHLPVMDENQDISGVLDITKCFYDAMEKLERAYSSSRKLYDALEGVQT 247
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E LR +M P+L T++ + VT+S +V A M E +
Sbjct: 248 ELGSS--QPQQIIQYVEALRSKMSGPTLETVL-DGLPPVTVSVRTSVKDAAAMMKEHHTT 304
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKDI++RVI+ L + V +VMTP+P+ A D I AL MH
Sbjct: 305 ALLVQDQGSITGIFTSKDIVLRVIAPGLDPSTCSVVRVMTPHPDFAPADMSIQAALRKMH 364
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 365 DGHYLNLPVMNETGEIVGMVDVLKLTYA 392
>gi|169618018|ref|XP_001802423.1| hypothetical protein SNOG_12196 [Phaeosphaeria nodorum SN15]
gi|160703532|gb|EAT80608.2| hypothetical protein SNOG_12196 [Phaeosphaeria nodorum SN15]
Length = 671
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/279 (37%), Positives = 167/279 (59%), Gaps = 13/279 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + + + ++MT+NP +DT A
Sbjct: 120 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIKARDVTIEEIMTKNPLCAKTDTSA 179
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 180 TDALDLMVRKGFRHLPVMDENHDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQA 239
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E +R++M P+L +++ VT+S +V A M E +
Sbjct: 240 EMGSSQ--PQQIIQYVEAIRQKMSGPTLESVL-NGLPPVTVSVRTSVKEAASLMKENHTT 296
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A +D I AL MH
Sbjct: 297 AVLVQDQGSITGIFTSKDVVLRVIAAGLDPATCSVVRVMTPHPDFAPMDMSIQSALRKMH 356
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILLDQI 275
DG +L+LPV+ G++V +VDV+ +T+A LDQI
Sbjct: 357 DGHYLNLPVMSDAGEIVGMVDVLKLTYAT------LDQI 389
>gi|302916341|ref|XP_003051981.1| CBS/PB1 domain-containing protein [Nectria haematococca mpVI
77-13-4]
gi|256732920|gb|EEU46268.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 672
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/280 (38%), Positives = 171/280 (61%), Gaps = 15/280 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ ++++MT+NP +DT A
Sbjct: 113 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGAKASAITIAEIMTKNPLCARTDTSA 172
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 173 TDALDLMVRKGFRHLPVMDENQDISGVLDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 232
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G++ P ++E LR +M P+L T++ T+S +V A + M E R +
Sbjct: 233 ELGSTQ--PQQIIQYVEALRSKMSGPTLETVL-NGVPPTTVSVRTSVKEAAQLMKENRTT 289
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNL-PADSTLVEKVMTPNPECATIDTPIVDALHIM 235
+ +V + GI TSKD+++RVI+ L PA+ ++V +VMTP+P+ A +D + AL M
Sbjct: 290 AVLVQDQGAITGIFTSKDVVLRVIAPGLDPANCSVV-RVMTPHPDFAPMDMTLQAALRKM 348
Query: 236 HDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILLDQI 275
HDG +L+LPV++ G++V +VDV+ +T+A LDQI
Sbjct: 349 HDGHYLNLPVMNDGGEIVGMVDVLKLTYAT------LDQI 382
>gi|258576507|ref|XP_002542435.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237902701|gb|EEP77102.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 656
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/268 (38%), Positives = 163/268 (60%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + + ++++MT+NP +DT A
Sbjct: 112 MAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGAGIRARDITIAEIMTKNPLCARTDTSA 171
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 172 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 231
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G S P ++E LR++M P+L +++ +T+S +V A M E +
Sbjct: 232 ELGASQ--PQQIIQYVEALRQKMSGPTLESVL-NGLPPITVSVRTSVKEAAALMKEHHTT 288
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A D I AL MH
Sbjct: 289 ALLVQDQGSITGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHPDFAPTDMSIQAALRKMH 348
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 349 DGHYLNLPVMNESGEIVGMVDVLKLTYA 376
>gi|119496427|ref|XP_001264987.1| CBS/PB1 domain-containing protein [Neosartorya fischeri NRRL 181]
gi|119413149|gb|EAW23090.1| CBS and PB1 domain protein [Neosartorya fischeri NRRL 181]
Length = 661
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/285 (38%), Positives = 168/285 (58%), Gaps = 13/285 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ E V+++MT+NP +DT A
Sbjct: 126 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGNGQKAREITVAEIMTKNPLCARTDTSA 185
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 186 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQT 245
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G++ P ++E LR +M P+L T++ + T+S +V A M E +
Sbjct: 246 ELGST--QPQQIIQYVEALRSKMSGPTLETVL-DGMPPTTVSVRTSVRDAAALMKEHHTT 302
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKDI++RVI+ L + V +VMTP+P+ A D I AL MH
Sbjct: 303 ALLVQDQGSITGIFTSKDIVLRVIAPGLDPATCSVVRVMTPHPDFAPADMSIQAALRKMH 362
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILLDQIMRQQAQ 281
DG +L+LPV++ G++V +VDV+ +T+A L+QI Q+
Sbjct: 363 DGHYLNLPVMNETGEIVGMVDVLKLTYAT------LEQINSMQSH 401
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 11/160 (6%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ALL+ D ++ GI T KDI RVIA L+ V +VMT +P F +D
Sbjct: 296 MKEHHTTALLVQDQGSI-TGIFTSKDIVLRVIAPGLDPATCSVVRVMTPHPDFAPADMSI 354
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLY---DAIARMERAAEKGKAIAAAVEG 116
AL+KM G + +LPV+ E GE++ ++D+ K Y + I M+ ++G A
Sbjct: 355 QAALRKMHDGHYLNLPVMNETGEIVGMVDVLKLTYATLEQINSMQSHDDEGPAWNKFWLS 414
Query: 117 VEKHWGTSISG----PNTFIETLRERMFRPSLSTIIPEKS 152
++ + +SG PN + L R + +++P +S
Sbjct: 415 MDHESDSMVSGSHQAPNRSV--LSPESPRQGVDSVLPNES 452
>gi|389643690|ref|XP_003719477.1| mitochondrial ribosomal protein subunit S4 [Magnaporthe oryzae
70-15]
gi|351639246|gb|EHA47110.1| mitochondrial ribosomal protein subunit S4 [Magnaporthe oryzae
70-15]
Length = 701
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/268 (38%), Positives = 162/268 (60%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ L ++++MT+NP +DT A
Sbjct: 129 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGLKATNVTIAEIMTKNPLCARTDTSA 188
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 189 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 248
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G S P ++E LR +M P+L +++ T+ +V A + M E +
Sbjct: 249 ELGASQ--PQQIIQYVEALRTKMSGPTLESVL-NGMPPTTVGVKTSVKEAAQMMKENHTT 305
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + + GI TSKD+++RVI+ L + V +VMTP+P+ A +D I AL MH
Sbjct: 306 AVLVQDQGQITGIFTSKDVVLRVIAPGLDPGNCSVVRVMTPHPDFAPMDMSIQAALRKMH 365
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 366 DGHYLNLPVMNDSGEIVGMVDVLKLTYA 393
>gi|358394371|gb|EHK43764.1| hypothetical protein TRIATDRAFT_171851, partial [Trichoderma
atroviride IMI 206040]
Length = 1006
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/269 (39%), Positives = 164/269 (60%), Gaps = 9/269 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + GI T KD+A RV+ L ++++MT+NP +DT A
Sbjct: 109 MAAKREDCVLVTDDEDRIAGIFTAKDLAFRVVGAGLKAANVTIAEIMTKNPLCARTDTSA 168
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 169 TDALDLMVRKGFRHLPVMDENQDISGVLDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 228
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G S P ++E LR +M P+L T++ T+S +V A M E +
Sbjct: 229 ELGAS--QPQQIIQYVEALRSKMSGPTLETVL-NGIPPTTVSVRTSVKEAAAMMKENHTT 285
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNL-PADSTLVEKVMTPNPECATIDTPIVDALHIM 235
+ +V + GI TSKD+++RVI+ L PA+ ++V +VMTP+P+ A +D I AL M
Sbjct: 286 AVLVQDQGAITGIFTSKDVVLRVIAPGLDPANCSVV-RVMTPHPDFAPMDMTIQAALRKM 344
Query: 236 HDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
HDG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 345 HDGHYLNLPVMNDGGEIVGMVDVLKLTYA 373
>gi|452978400|gb|EME78164.1| hypothetical protein MYCFIDRAFT_200475 [Pseudocercospora fijiensis
CIRAD86]
Length = 671
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/280 (38%), Positives = 169/280 (60%), Gaps = 14/280 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ L V+++MT+NP +DT A
Sbjct: 111 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGLKANNVTVAEIMTKNPLCAKTDTSA 170
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA K + A+EGV+
Sbjct: 171 TDALDLMVRKGFRHLPVMDENHDISGILDITKCFYDAMEKLERAYASSKKLYDALEGVQA 230
Query: 120 HWGTSISGPN---TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G++ P ++E +R RM P+L +++ T+S +V A + M E +
Sbjct: 231 ELGSTQ--PQQIIQYVEAVRHRMSGPTLESVL-NGLPPTTVSVRTSVKEAAQLMKENHTT 287
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + + GI TSKD+++RVI+ L + V +VMTP+P+ A +D I AL MH
Sbjct: 288 AVLVQDQGQITGIFTSKDVVLRVIAAGLDPGNCSVIRVMTPHPDFAPMDMSIQQALRKMH 347
Query: 237 DGKFLHLPVVDRDGD-VVDVVDVIHITHAAVATEILLDQI 275
DG +L+LPV++++ D +V +VDV+ +T+A LDQI
Sbjct: 348 DGHYLNLPVMNKESDEIVGMVDVLKLTYAT------LDQI 381
>gi|440472354|gb|ELQ41219.1| mitochondrial ribosomal protein subunit S4 [Magnaporthe oryzae Y34]
gi|440489369|gb|ELQ69027.1| mitochondrial ribosomal protein subunit S4 [Magnaporthe oryzae
P131]
Length = 733
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/268 (38%), Positives = 162/268 (60%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ L ++++MT+NP +DT A
Sbjct: 161 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGLKATNVTIAEIMTKNPLCARTDTSA 220
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 221 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 280
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G S P ++E LR +M P+L +++ T+ +V A + M E +
Sbjct: 281 ELGASQ--PQQIIQYVEALRTKMSGPTLESVL-NGMPPTTVGVKTSVKEAAQMMKENHTT 337
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + + GI TSKD+++RVI+ L + V +VMTP+P+ A +D I AL MH
Sbjct: 338 AVLVQDQGQITGIFTSKDVVLRVIAPGLDPGNCSVVRVMTPHPDFAPMDMSIQAALRKMH 397
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 398 DGHYLNLPVMNDSGEIVGMVDVLKLTYA 425
>gi|336467143|gb|EGO55307.1| mitochondrial ribosomal protein subunit S4 [Neurospora tetrasperma
FGSC 2508]
Length = 687
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 163/268 (60%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ L ++++MT+NP +DT A
Sbjct: 127 MAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGGGLKANTVTIAEIMTKNPLCARTDTSA 186
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 187 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYASSRRLYDALEGVQS 246
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
GTS P ++E LR +M P+L +++ T+S +V A + M E +
Sbjct: 247 ELGTSQ--PQQIIQYVEALRSKMSGPTLESVL-NGIPPTTVSVRTSVKEAAQLMKENHTT 303
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A +D I AL MH
Sbjct: 304 AVLVQDQGAITGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHPDFAPMDMTIQAALRKMH 363
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 364 DGHYLNLPVMNDAGEIVGMVDVLKLTYA 391
>gi|302697565|ref|XP_003038461.1| hypothetical protein SCHCODRAFT_46524 [Schizophyllum commune H4-8]
gi|300112158|gb|EFJ03559.1| hypothetical protein SCHCODRAFT_46524 [Schizophyllum commune H4-8]
Length = 658
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/281 (39%), Positives = 161/281 (57%), Gaps = 19/281 (6%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D L GI T KD+A RV A L+ TPV +MTRNP T A
Sbjct: 88 AAKRTDCVLVVDDEEGLSGIFTAKDLAYRVTAEGLDPHTTPVHAIMTRNPMVTRDTTSAT 147
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EAL+ MV FRHLPV E+G V+ LLDIAK +A+ ++ER++ + + +A+ GV+
Sbjct: 148 EALELMVTRHFRHLPVCNEDGNVVGLLDIAKVFQEALGKVERSSTASEQLMSAMAGVQSE 207
Query: 121 WGTSISGPNT-----FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRL 175
G P ++E LRE+ P L+T++ ++ T+ P TV A + M E R
Sbjct: 208 MGNIGHNPQAAAMLAWVEKLREKTALPDLTTLMDARTLPATVGPKTTVRDAARLMKEHR- 266
Query: 176 SSAVVTVENKPR------------GILTSKDILMRVISQNLPADSTLVEKVMTPNPECAT 223
++AV +E P GI TSKD+++RV++ L A V +VMTP+P+ A
Sbjct: 267 TTAVCVMEGLPASPGMHPNSAKIAGIFTSKDVVLRVVAAGLDAGRCSVVRVMTPHPDTAP 326
Query: 224 IDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
+ I DAL MH G +L+LPVV+ DG +V ++DV+ +T+A
Sbjct: 327 PNMSIHDALKKMHTGHYLNLPVVEADGTLVAIIDVLTLTYA 367
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 14 SNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFR 73
++A + GI T KD+ RV+A L+ V +VMT +P + +AL+KM G +
Sbjct: 285 NSAKIAGIFTSKDVVLRVVAAGLDAGRCSVVRVMTPHPDTAPPNMSIHDALKKMHTGHYL 344
Query: 74 HLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWG 122
+LPVVE +G ++A++D+ Y + +M +++ A AA EG WG
Sbjct: 345 NLPVVEADGTLVAIIDVLTLTYATLEQMNAVSQEA-APAADNEGGPM-WG 392
>gi|302652051|ref|XP_003017887.1| hypothetical protein TRV_08098 [Trichophyton verrucosum HKI 0517]
gi|291181469|gb|EFE37242.1| hypothetical protein TRV_08098 [Trichophyton verrucosum HKI 0517]
Length = 648
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/268 (38%), Positives = 162/268 (60%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + + ++++MT+NP +DT A
Sbjct: 105 MAAKREDCVLVTDDDDRIAGIFTAKDLAYRVVGAGIRARDVTIAEIMTKNPLCARTDTSA 164
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 165 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 224
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E LR +M P+L +++ T+S +V A M E +
Sbjct: 225 ELGSS--QPQQIIQYVEALRSKMSGPTLESVL-NGLPPTTVSVRTSVKEAATLMKENHTT 281
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A D I AL MH
Sbjct: 282 ALLVQDQGSITGIFTSKDVVLRVIAPGLDPSTCSVVRVMTPHPDFAPTDMTIQAALRKMH 341
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 342 DGHYLNLPVMNESGEIVGMVDVLKLTYA 369
>gi|367031380|ref|XP_003664973.1| hypothetical protein MYCTH_2135067 [Myceliophthora thermophila ATCC
42464]
gi|347012244|gb|AEO59728.1| hypothetical protein MYCTH_2135067 [Myceliophthora thermophila ATCC
42464]
Length = 1103
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 164/268 (61%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ L ++++MT+NP +DT A
Sbjct: 119 MAAKREDCVLVTDEDDRIAGIFTAKDLAFRVVGAGLKPTNVTIAEIMTKNPLCARTDTSA 178
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 179 TDALDLMVRKGFRHLPVMDENQDISGVLDITKCFYDAMEKLERAYASSRRLYDALEGVQS 238
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
GTS P ++E LR +M P+L +++ T++ +V A + M E +
Sbjct: 239 ELGTSQ--PQQIIQYVEALRSKMSGPTLESVL-NGLPPTTVTVRTSVKEAAQLMKENHTT 295
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +VT + GI TSKD+++RVI+ L + V +VMTP+P+ A +D I AL MH
Sbjct: 296 AVLVTDQGAITGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHPDFAPMDMSIQAALRKMH 355
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 356 DGHYLNLPVMNDSGEIVGMVDVLKLTYA 383
>gi|302503214|ref|XP_003013567.1| hypothetical protein ARB_00014 [Arthroderma benhamiae CBS 112371]
gi|291177132|gb|EFE32927.1| hypothetical protein ARB_00014 [Arthroderma benhamiae CBS 112371]
Length = 648
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/268 (38%), Positives = 162/268 (60%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + + ++++MT+NP +DT A
Sbjct: 105 MAAKREDCVLVTDDDDRIAGIFTAKDLAYRVVGAGIRARDVTIAEIMTKNPLCARTDTSA 164
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 165 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 224
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E LR +M P+L +++ T+S +V A M E +
Sbjct: 225 ELGSS--QPQQIIQYVEALRSKMSGPTLESVL-NGLPPTTVSVRTSVKEAATLMKENHTT 281
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A D I AL MH
Sbjct: 282 ALLVQDQGSITGIFTSKDVVLRVIAPGLDPSTCSVVRVMTPHPDFAPTDMTIQAALRKMH 341
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 342 DGHYLNLPVMNESGEIVGMVDVLKLTYA 369
>gi|164422735|ref|XP_001727992.1| CBS/PB1 domain-containing protein [Neurospora crassa OR74A]
gi|157069798|gb|EDO64901.1| mitochondrial ribosomal protein subunit S4 [Neurospora crassa
OR74A]
Length = 610
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 163/268 (60%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ L ++++MT+NP +DT A
Sbjct: 50 MAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGGGLKANTVTIAEIMTKNPLCARTDTSA 109
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 110 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYASSRRLYDALEGVQS 169
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
GTS P ++E LR +M P+L +++ T+S +V A + M E +
Sbjct: 170 ELGTS--QPQQIIQYVEALRSKMSGPTLESVL-NGIPPTTVSVRTSVKEAAQLMKENHTT 226
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A +D I AL MH
Sbjct: 227 AVLVQDQGAITGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHPDFAPMDMTIQAALRKMH 286
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 287 DGHYLNLPVMNDAGEIVGMVDVLKLTYA 314
>gi|342874129|gb|EGU76199.1| hypothetical protein FOXB_13271 [Fusarium oxysporum Fo5176]
Length = 668
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/280 (38%), Positives = 171/280 (61%), Gaps = 15/280 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ ++++MT+NP +DT A
Sbjct: 115 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGAKASAITIAEIMTKNPLCARTDTSA 174
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 175 TDALDLMVRKGFRHLPVMDENQDISGVLDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 234
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G++ P ++E LR +M P+L T++ T+S +V A + M E R +
Sbjct: 235 ELGSTQ--PQQIIQYVEALRSKMSGPTLETVL-NGVPPTTVSVRTSVKEAAQLMKENRTT 291
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNL-PADSTLVEKVMTPNPECATIDTPIVDALHIM 235
+ +V + GI TSKD+++RVI+ L PA+ ++V +VMTP+P+ A +D + AL M
Sbjct: 292 AVLVQDQGAITGIFTSKDVVLRVIAPGLDPANCSVV-RVMTPHPDFAPMDMTLQAALRKM 350
Query: 236 HDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILLDQI 275
HDG +L+LPV++ G++V +VDV+ +T+A LDQI
Sbjct: 351 HDGHYLNLPVMNDGGEIVGMVDVLKLTYAT------LDQI 384
>gi|315056125|ref|XP_003177437.1| CBS/PB1 domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311339283|gb|EFQ98485.1| meiotically up-regulated 70 protein [Arthroderma gypseum CBS
118893]
Length = 660
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/268 (38%), Positives = 162/268 (60%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + + ++++MT+NP +DT A
Sbjct: 117 MAAKREDCVLVTDDDDRIAGIFTAKDLAYRVVGAGIRARDVTIAEIMTKNPLCARTDTSA 176
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 177 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 236
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E LR +M P+L +++ T+S +V A M E +
Sbjct: 237 ELGSS--QPQQIIQYVEALRSKMSGPTLESVL-NGLPPTTVSVRTSVKEAAALMKENHTT 293
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A D I AL MH
Sbjct: 294 ALLVQDQGSITGIFTSKDVVLRVIAPGLDPSTCSVVRVMTPHPDFAPTDMSIQAALRKMH 353
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 354 DGHYLNLPVMNESGEIVGMVDVLKLTYA 381
>gi|378725744|gb|EHY52203.1| hypothetical protein HMPREF1120_00418 [Exophiala dermatitidis
NIH/UT8656]
Length = 673
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/270 (37%), Positives = 164/270 (60%), Gaps = 7/270 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + + + ++MT+NP +DT A
Sbjct: 116 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIKANQVTIEQIMTKNPLCARTDTSA 175
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC Y+A+ ++ERA + + A+EGV+
Sbjct: 176 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYEAMEKLERAYSSSRKLYDALEGVQS 235
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E LR++M P+L +++ T+S +V A + M E +
Sbjct: 236 ELGSS--QPQQIIQYVEALRQKMSGPTLESVL-NGLPPTTVSVRTSVKEAAQLMKENHTT 292
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A D I AL MH
Sbjct: 293 AVLVQDQGSITGIFTSKDVVLRVIAPGLDPSTCSVVRVMTPHPDFAPTDMSIQAALRKMH 352
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
DG +L+LPV++ G++V +VDV+ +T+A +
Sbjct: 353 DGHYLNLPVMNETGEIVGMVDVLKLTYATL 382
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M A+L+ D ++ GI T KD+ RVIA L+ V +VMT +P F +D
Sbjct: 286 MKENHTTAVLVQDQGSI-TGIFTSKDVVLRVIAPGLDPSTCSVVRVMTPHPDFAPTDMSI 344
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLY---DAIARMERAAEKGKAIAAAVEG 116
AL+KM G + +LPV+ E GE++ ++D+ K Y + I M +G A
Sbjct: 345 QAALRKMHDGHYLNLPVMNETGEIVGMVDVLKLTYATLEQINTMNTGESEGPAWNKFWLS 404
Query: 117 VEKHWGTSISGPNTFIET-------LRERMFRPSLS---TIIPEKS 152
++ + +SG + T + M RP + +++P+ S
Sbjct: 405 MDNDTESMVSGEGSHRPTTPGHRSVMESEMTRPGMERGDSVLPQDS 450
>gi|406864620|gb|EKD17664.1| ribosomal protein subunit S4 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 672
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 162/268 (60%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + GI T KD+A RV+ + ++++MT+NP +DT A
Sbjct: 120 MAAKREDCVLVTDDEDRIAGIFTAKDLAFRVVGAGIKAGNVTIAEIMTKNPLCARTDTSA 179
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 180 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 239
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E LR +M P+L +++ K T+S +V A M E +
Sbjct: 240 ELGSS--QPQQIIQYVEALRSKMSGPTLESVLDGKPPT-TVSVRTSVREAAALMKENHTT 296
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A +D I AL MH
Sbjct: 297 AVLVQDQGSITGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHPDFAPMDMSIQAALRKMH 356
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 357 DGHYLNLPVMNEAGEIVGMVDVLKLTYA 384
>gi|46123863|ref|XP_386485.1| hypothetical protein FG06309.1 [Gibberella zeae PH-1]
Length = 680
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/280 (38%), Positives = 171/280 (61%), Gaps = 15/280 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ ++++MT+NP +DT A
Sbjct: 121 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGAKASAVTIAEIMTKNPLCARTDTSA 180
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 181 TDALDLMVRKGFRHLPVMDENQDISGVLDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 240
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G++ P ++E LR +M P+L T++ T+S +V A + M E R +
Sbjct: 241 ELGST--QPQQIIQYVEALRSKMSGPTLETVL-NGVPPTTVSVRTSVREAAQLMKENRTT 297
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNL-PADSTLVEKVMTPNPECATIDTPIVDALHIM 235
+ +V + GI TSKD+++RVI+ L PA+ ++V +VMTP+P+ A +D + AL M
Sbjct: 298 AVLVQDQGAITGIFTSKDVVLRVIAPGLDPANCSVV-RVMTPHPDFAPMDMTLQAALRKM 356
Query: 236 HDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILLDQI 275
HDG +L+LPV++ G++V +VDV+ +T+A LDQI
Sbjct: 357 HDGHYLNLPVMNDGGEIVGMVDVLKLTYAT------LDQI 390
>gi|350288234|gb|EGZ69470.1| hypothetical protein NEUTE2DRAFT_159933 [Neurospora tetrasperma
FGSC 2509]
Length = 1132
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 163/268 (60%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ L ++++MT+NP +DT A
Sbjct: 127 MAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGGGLKANTVTIAEIMTKNPLCARTDTSA 186
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 187 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYASSRRLYDALEGVQS 246
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
GTS P ++E LR +M P+L +++ T+S +V A + M E +
Sbjct: 247 ELGTSQ--PQQIIQYVEALRSKMSGPTLESVL-NGIPPTTVSVRTSVKEAAQLMKENHTT 303
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A +D I AL MH
Sbjct: 304 AVLVQDQGAITGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHPDFAPMDMTIQAALRKMH 363
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 364 DGHYLNLPVMNDAGEIVGMVDVLKLTYA 391
>gi|408399597|gb|EKJ78696.1| hypothetical protein FPSE_01184 [Fusarium pseudograminearum CS3096]
Length = 682
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/280 (38%), Positives = 171/280 (61%), Gaps = 15/280 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ ++++MT+NP +DT A
Sbjct: 123 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGAKASAVTIAEIMTKNPLCARTDTSA 182
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 183 TDALDLMVRKGFRHLPVMDENQDISGVLDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 242
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G++ P ++E LR +M P+L T++ T+S +V A + M E R +
Sbjct: 243 ELGST--QPQQIIQYVEALRSKMSGPTLETVL-NGVPPTTVSVRTSVREAAQLMKENRTT 299
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNL-PADSTLVEKVMTPNPECATIDTPIVDALHIM 235
+ +V + GI TSKD+++RVI+ L PA+ ++V +VMTP+P+ A +D + AL M
Sbjct: 300 AVLVQDQGAITGIFTSKDVVLRVIAPGLDPANCSVV-RVMTPHPDFAPMDMTLQAALRKM 358
Query: 236 HDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILLDQI 275
HDG +L+LPV++ G++V +VDV+ +T+A LDQI
Sbjct: 359 HDGHYLNLPVMNDGGEIVGMVDVLKLTYAT------LDQI 392
>gi|327357586|gb|EGE86443.1| CBS and PB1 domain-containing protein [Ajellomyces dermatitidis
ATCC 18188]
Length = 663
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/268 (37%), Positives = 164/268 (61%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + + ++++MT+NP +DT A
Sbjct: 116 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIRARDVTIAEIMTKNPLCARTDTSA 175
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 176 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 235
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G++ P ++E LR++M P+L +++ T+S +V A M E +
Sbjct: 236 ELGSNQ--PQQIIQYVEALRQKMSGPTLESVL-NGLPPTTVSVRTSVREAAALMKENHTT 292
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L ++ V +VMTP+P+ A D I AL MH
Sbjct: 293 ALLVQDQGSITGIFTSKDVVLRVIAPGLDPNTCSVVRVMTPHPDFAPTDMSIQAALRKMH 352
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 353 DGHYLNLPVMNEAGEIVGMVDVLKLTYA 380
>gi|327294133|ref|XP_003231762.1| CBS/PB1 domain-containing protein [Trichophyton rubrum CBS 118892]
gi|326465707|gb|EGD91160.1| CBS and PB1 domain-containing protein [Trichophyton rubrum CBS
118892]
Length = 660
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/268 (38%), Positives = 162/268 (60%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + + ++++MT+NP +DT A
Sbjct: 117 MAAKREDCVLVTDDDDRIAGIFTAKDLAYRVVGAGIRARDVTIAEIMTKNPLCARTDTSA 176
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 177 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 236
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E LR +M P+L +++ T+S +V A M E +
Sbjct: 237 ELGSSQ--PQQIIQYVEALRSKMSGPTLESVL-NGLPPTTVSVRTSVKEAAALMKENHTT 293
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A D I AL MH
Sbjct: 294 ALLVQDQGSITGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHPDFAPTDMSIQAALRKMH 353
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 354 DGHYLNLPVMNESGEIVGMVDVLKLTYA 381
>gi|261206284|ref|XP_002627879.1| CBS/PB1 domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239592938|gb|EEQ75519.1| CBS and domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239610889|gb|EEQ87876.1| CBS and domain-containing protein [Ajellomyces dermatitidis ER-3]
Length = 666
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 101/268 (37%), Positives = 164/268 (61%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + + ++++MT+NP +DT A
Sbjct: 119 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIRARDVTIAEIMTKNPLCARTDTSA 178
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 179 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 238
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G++ P ++E LR++M P+L +++ T+S +V A M E +
Sbjct: 239 ELGSNQ--PQQIIQYVEALRQKMSGPTLESVL-NGLPPTTVSVRTSVREAAALMKENHTT 295
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L ++ V +VMTP+P+ A D I AL MH
Sbjct: 296 ALLVQDQGSITGIFTSKDVVLRVIAPGLDPNTCSVVRVMTPHPDFAPTDMSIQAALRKMH 355
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 356 DGHYLNLPVMNEAGEIVGMVDVLKLTYA 383
>gi|224003559|ref|XP_002291451.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973227|gb|EED91558.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 298
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 107/275 (38%), Positives = 160/275 (58%), Gaps = 13/275 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A++R DA ++TD + + GI+TD D+ RV+A+ L+ TP+S VMT NPT V A
Sbjct: 27 LASKRGDAAIITDQSGGMAGIITDTDVTRRVVAKHLSPSATPISDVMTANPTCVSMTDSA 86
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIA----AAVE 115
EAL MV+ +FRHLPV +NG V+ +LDIAKCL DAI+++E + +KG + A +
Sbjct: 87 TEALVTMVENRFRHLPVTDDNGAVVGVLDIAKCLNDAISKLEHSKDKGSSAAEDAVKQMA 146
Query: 116 GVEKHWGTSISGPNTFIETLRERMF----RPSLSTIIPEKSKVVTISPTDTVLMATKKML 171
++ G + + L + F P+L I+ K + + P+ ++ + M
Sbjct: 147 NLQGAGGVQAAALQQLLGPLLSQAFGGQTSPTLRAILAGKPSTM-VGPSSSLQEVGELMA 205
Query: 172 ELRLSSAVVTVENKPR-GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVD 230
E R A + VEN GI KD++ R I++ L D T V VMTPNPE + DT +++
Sbjct: 206 EAR--KAALIVENGNLIGIFGFKDMMSRAIAKQLRLDLTSVSTVMTPNPESVSPDTTVLE 263
Query: 231 ALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 265
AL IMHD KFL LPV + +G V+ VVDV+ +A+
Sbjct: 264 ALQIMHDNKFLTLPVCEANGSVIGVVDVMDCVYAS 298
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVISQNLPADST 209
K+ +V+ S TD+VL T+ + R +A++T ++ GI+T D+ RV++++L +T
Sbjct: 9 KAPIVS-SSTDSVLSVTQMLASKRGDAAIITDQSGGMAGIITDTDVTRRVVAKHLSPSAT 67
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
+ VMT NP C ++ +AL M + +F HLPV D +G VV V+D+ + A++
Sbjct: 68 PISDVMTANPTCVSMTDSATEALVTMVENRFRHLPVTDDNGAVVGVLDIAKCLNDAIS 125
>gi|154278497|ref|XP_001540062.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150413647|gb|EDN09030.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 403
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 101/268 (37%), Positives = 164/268 (61%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + + ++++MT+NP +DT A
Sbjct: 122 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIRARDVTIAEIMTKNPLCARTDTSA 181
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 182 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 241
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G++ P ++E LR++M P+L +++ T+S +V A M E +
Sbjct: 242 ELGSNQ--PQQIIQYVEALRQKMSGPTLESVL-NGLPPTTVSVRTSVREAATLMKENHTT 298
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L ++ V +VMTP+P+ A D I AL MH
Sbjct: 299 ALLVQDQGSITGIFTSKDVVLRVIAPGLDPNTCSVIRVMTPHPDFAPTDMSIQAALRKMH 358
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 359 DGHYLNLPVMNEAGEIVGMVDVLKLTYA 386
>gi|240280165|gb|EER43669.1| CBS and PB1 protein [Ajellomyces capsulatus H143]
Length = 612
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 101/270 (37%), Positives = 165/270 (61%), Gaps = 7/270 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + + ++++MT+NP +DT A
Sbjct: 66 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIRARDVTIAEIMTKNPLCARTDTSA 125
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 126 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 185
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G++ P ++E LR++M P+L +++ T+S +V A M E +
Sbjct: 186 ELGSN--QPQQIIQYVEALRQKMSGPTLESVL-NGLPPTTVSVRTSVREAATLMKENHTT 242
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L ++ V +VMTP+P+ A D I AL MH
Sbjct: 243 ALLVQDQGSITGIFTSKDVVLRVIAPGLDPNTCSVVRVMTPHPDFAPTDMSIQAALRKMH 302
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
DG +L+LPV++ G++V +VDV+ +T+A +
Sbjct: 303 DGHYLNLPVMNEAGEIVGMVDVLKLTYATL 332
>gi|340518860|gb|EGR49100.1| predicted protein [Trichoderma reesei QM6a]
Length = 606
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 105/269 (39%), Positives = 164/269 (60%), Gaps = 9/269 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + GI T KD+A RV+ L ++++MT+NP +DT A
Sbjct: 55 MAAKREDCVLVTDDEDRIAGIFTAKDLAFRVVGAGLKAANVTIAEIMTKNPLCARTDTSA 114
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 115 TDALDLMVRKGFRHLPVMDENQDISGVLDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 174
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G S P ++E LR +M P+L +++ T+S +V A M E +
Sbjct: 175 ELGAS--QPQQIIQYVEALRSKMSGPTLESVL-NGIPPTTVSVRTSVKEAAAMMKENHTT 231
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNL-PADSTLVEKVMTPNPECATIDTPIVDALHIM 235
+ +V + GI TSKD+++RVI+ L PA+ ++V +VMTP+P+ A +D I AL M
Sbjct: 232 AVLVQDQGAITGIFTSKDVVLRVIAPGLDPANCSVV-RVMTPHPDFAPMDMTIQAALRKM 290
Query: 236 HDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
HDG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 291 HDGHYLNLPVMNDGGEIVGMVDVLKLTYA 319
>gi|358385733|gb|EHK23329.1| hypothetical protein TRIVIDRAFT_79905 [Trichoderma virens Gv29-8]
Length = 670
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 105/269 (39%), Positives = 164/269 (60%), Gaps = 9/269 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + GI T KD+A RV+ L ++++MT+NP +DT A
Sbjct: 120 MAAKREDCVLVTDDEDRIAGIFTAKDLAFRVVGAGLKAANVTIAEIMTKNPLCARTDTSA 179
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 180 TDALDLMVRKGFRHLPVMDENQDISGVLDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 239
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G S P ++E LR +M P+L +++ T+S +V A M E +
Sbjct: 240 ELGAS--QPQQIIQYVEALRSKMSGPTLESVL-NGIPPTTVSVRTSVKEAAAMMKENHTT 296
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNL-PADSTLVEKVMTPNPECATIDTPIVDALHIM 235
+ +V + GI TSKD+++RVI+ L PA+ ++V +VMTP+P+ A +D I AL M
Sbjct: 297 AVLVQDQGAITGIFTSKDVVLRVIAPGLDPANCSVV-RVMTPHPDFAPMDMTIQAALRKM 355
Query: 236 HDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
HDG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 356 HDGHYLNLPVMNDGGEIVGMVDVLKLTYA 384
>gi|296822790|ref|XP_002850342.1| CBS/PB1 domain-containing protein [Arthroderma otae CBS 113480]
gi|238837896|gb|EEQ27558.1| CBS and PB1 domain-containing protein [Arthroderma otae CBS 113480]
Length = 658
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 102/268 (38%), Positives = 162/268 (60%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + + ++++MT+NP +DT A
Sbjct: 112 MAAKREDCVLVTDDDDRIAGIFTAKDLAYRVVGAGIRARDVTIAEIMTKNPLCARTDTSA 171
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 172 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 231
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E LR +M P+L +++ T+S +V A M E +
Sbjct: 232 ELGSS--QPQQIIQYVEALRSKMSGPTLESVL-NGLPPTTVSVRTSVKEAAALMKENHTT 288
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A D I AL MH
Sbjct: 289 ALLVQDQGSITGIFTSKDVVLRVIAPGLDPSTCSVVRVMTPHPDFAPTDMTIQAALRKMH 348
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 349 DGHYLNLPVMNEAGEIVGMVDVLKLTYA 376
>gi|70991156|ref|XP_750427.1| CBS and PB1 domain protein [Aspergillus fumigatus Af293]
gi|66848059|gb|EAL88389.1| CBS and PB1 domain protein [Aspergillus fumigatus Af293]
gi|159130901|gb|EDP56014.1| CBS and PB1 domain protein [Aspergillus fumigatus A1163]
Length = 661
Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 108/285 (37%), Positives = 168/285 (58%), Gaps = 13/285 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ E V+++MT+NP +DT A
Sbjct: 126 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGNGQKAREITVAEIMTKNPLCARTDTSA 185
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 186 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQT 245
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G++ P ++E LR +M P+L +++ + T+S +V A M E +
Sbjct: 246 ELGSTQ--PQQIIQYVEALRSKMSGPTLESVL-DGLPPTTVSVRTSVRDAATLMKEHHTT 302
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKDI++RVI+ L + V +VMTP+P+ A D I AL MH
Sbjct: 303 ALLVQDQGSITGIFTSKDIVLRVIAPGLDPATCSVVRVMTPHPDFAPADMSIQAALRKMH 362
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILLDQIMRQQAQ 281
DG +L+LPV++ G++V +VDV+ +T+A L+QI Q+
Sbjct: 363 DGHYLNLPVMNETGEIVGMVDVLKLTYAT------LEQINSMQSH 401
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ALL+ D ++ GI T KDI RVIA L+ V +VMT +P F +D
Sbjct: 296 MKEHHTTALLVQDQGSI-TGIFTSKDIVLRVIAPGLDPATCSVVRVMTPHPDFAPADMSI 354
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLY---DAIARMERAAEKGKA 109
AL+KM G + +LPV+ E GE++ ++D+ K Y + I M+ ++G A
Sbjct: 355 QAALRKMHDGHYLNLPVMNETGEIVGMVDVLKLTYATLEQINSMQSHDDEGPA 407
>gi|225560596|gb|EEH08877.1| CBS and PB1 domain-containing protein [Ajellomyces capsulatus
G186AR]
gi|325088886|gb|EGC42196.1| CBS and PB1 domain-containing protein [Ajellomyces capsulatus H88]
Length = 668
Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 101/270 (37%), Positives = 165/270 (61%), Gaps = 7/270 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + + ++++MT+NP +DT A
Sbjct: 122 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIRARDVTIAEIMTKNPLCARTDTSA 181
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 182 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 241
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G++ P ++E LR++M P+L +++ T+S +V A M E +
Sbjct: 242 ELGSNQ--PQQIIQYVEALRQKMSGPTLESVL-NGLPPTTVSVRTSVREAATLMKENHTT 298
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L ++ V +VMTP+P+ A D I AL MH
Sbjct: 299 ALLVQDQGSITGIFTSKDVVLRVIAPGLDPNTCSVVRVMTPHPDFAPTDMSIQAALRKMH 358
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
DG +L+LPV++ G++V +VDV+ +T+A +
Sbjct: 359 DGHYLNLPVMNEAGEIVGMVDVLKLTYATL 388
>gi|388580282|gb|EIM20598.1| CBS-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 818
Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 171/303 (56%), Gaps = 29/303 (9%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D LCGI T KD+A RV+A ++ TPVS++MT NP A
Sbjct: 225 AAKRTDCVLVVDDEESLCGIFTAKDLAFRVVAESIDTRHTPVSEIMTPNPMVTRDSASAT 284
Query: 62 EALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
EAL+ MV FRHLPV ++G+V+ LLDI + +A+ ++ER + + A+EGV+
Sbjct: 285 EALELMVARAFRHLPVCNDDGDVVGLLDITRVFNEALDKIERGYGASQKLYNALEGVQNE 344
Query: 121 WGTSISGPN-----TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRL 175
G + + +++ LRERM P L +++ ++ T+S TV A + M + R
Sbjct: 345 LGGNTNSRQAAAMMNYVDALRERMALPDLQSVLDARTHPATVSVRTTVREAARIMKQYRT 404
Query: 176 SSAVV-------------TVENKPR--GILTSKDILMRVISQNLPADSTLVEKVMTPNPE 220
++ V +N+PR GI TSKD+++RVI+ L D V +VMTP+P+
Sbjct: 405 TAVCVMDNPISAGTGGHLNSQNQPRIAGIFTSKDVVLRVIAAGLQPDRCSVVRVMTPHPD 464
Query: 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILLDQI--MRQ 278
A I +AL M+ G +L++PVV+ DG ++ +VDV+ +T+A +L+QI M Q
Sbjct: 465 RAPPSMTIQEALRKMYTGHYLNMPVVEDDGKLIAIVDVLKLTYA------ILEQINSMSQ 518
Query: 279 QAQ 281
+ Q
Sbjct: 519 EQQ 521
>gi|346327044|gb|EGX96640.1| mitochondrial ribosomal protein subunit S4 [Cordyceps militaris
CM01]
Length = 687
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 161/268 (60%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ L ++++MT+NP +DT A
Sbjct: 136 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGLKSSSVTIAEIMTKNPLCARTDTSA 195
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV
Sbjct: 196 TDALDLMVRKGFRHLPVMDENQDISGVLDITKCFYDAMEKLERAYSSSRKLYDALEGVHS 255
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
GT+ P ++E LR +M P+L T++ T+S +V A M E +
Sbjct: 256 ELGTNQ--PQQIIQYVEALRSKMSGPTLETVL-NGIPPTTVSVRTSVREAAALMKENHTT 312
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A +D I AL MH
Sbjct: 313 AVLVQDQGAITGIFTSKDVVLRVIAPGLDPTNCSVVRVMTPHPDFAPMDMTIQAALRKMH 372
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 373 DGHYLNLPVMNDSGEIVGMVDVLKLTYA 400
>gi|171679826|ref|XP_001904859.1| hypothetical protein [Podospora anserina S mat+]
gi|170939539|emb|CAP64766.1| unnamed protein product [Podospora anserina S mat+]
Length = 677
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 163/268 (60%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ L ++++MT+NP +DT A
Sbjct: 121 MAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGAGLKAANVTIAEIMTKNPLCARTDTSA 180
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC Y+A+ ++ERA + + A+EGV+
Sbjct: 181 TDALDLMVRKGFRHLPVMDENQDISGVLDITKCFYEAMEKLERAYSSSRRLYDALEGVQS 240
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
GTS P ++E LR +M P+L +++ T+S +V A + M E +
Sbjct: 241 ELGTSQ--PQQIIQYVEALRSKMSGPTLESVL-NGIPPTTVSVRTSVKEAAQLMKENHTT 297
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A +D I AL MH
Sbjct: 298 AVLVQDQGAITGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHPDFAPMDMTIQAALRKMH 357
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 358 DGHYLNLPVMNDGGEIVGMVDVLKLTYA 385
>gi|396483815|ref|XP_003841796.1| similar to CBS and PB1 domain containing protein [Leptosphaeria
maculans JN3]
gi|312218371|emb|CBX98317.1| similar to CBS and PB1 domain containing protein [Leptosphaeria
maculans JN3]
Length = 666
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 105/279 (37%), Positives = 167/279 (59%), Gaps = 13/279 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + + + ++MT+NP +DT A
Sbjct: 117 MAAKREDCVLVTDEDDRIAGIFTAKDLAFRVVGAGIKARDVTIEEIMTKNPLCAKTDTSA 176
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 177 TDALDLMVRKGFRHLPVMDENHDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQA 236
Query: 120 HWGTSISGPN---TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P +++E +R++M P+L +++ T+S +V A M E +
Sbjct: 237 EMGSSQ--PQQIISYVEAIRQKMSGPTLESVL-TGLPPTTVSVRTSVKEAAALMKENHTT 293
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A +D I AL MH
Sbjct: 294 AVLVQDQGSITGIFTSKDVVLRVIAAGLDPATCSVVRVMTPHPDFAPMDMSIQSALRKMH 353
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILLDQI 275
DG +L+LPV+ G++V +VDV+ +T+A LDQI
Sbjct: 354 DGHYLNLPVMSDAGEIVGMVDVLKLTYAT------LDQI 386
>gi|326472832|gb|EGD96841.1| CBS and PB1 domain-containing protein [Trichophyton tonsurans CBS
112818]
Length = 659
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/268 (38%), Positives = 161/268 (60%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + + + ++MT+NP +DT A
Sbjct: 117 MAAKREDCVLVTDDDDRIAGIFTAKDLAYRVVGAGIRARDVTIVEIMTKNPLCARTDTSA 176
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 177 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 236
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E LR +M P+L +++ T+S +V A M E +
Sbjct: 237 ELGSS--QPQQIIQYVEALRSKMSGPTLESVL-NGLPPTTVSVRTSVKEAAALMKENHTT 293
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A D I AL MH
Sbjct: 294 ALLVQDQGSITGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHPDFAPTDMSIQAALRKMH 353
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 354 DGHYLNLPVMNESGEIVGMVDVLKLTYA 381
>gi|380089158|emb|CCC12924.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 689
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 163/268 (60%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ L ++++MT+NP +DT A
Sbjct: 127 MAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGAGLKSNTVTIAEIMTKNPLCARTDTSA 186
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 187 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYASSRRLYDALEGVQS 246
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
GTS P ++E LR +M P+L +++ T+S +V A + M E +
Sbjct: 247 ELGTSQ--PQQIIQYVEALRSKMSGPTLESVL-NGIPPTTVSVRTSVKEAAQLMKENHTT 303
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A ++ I AL MH
Sbjct: 304 AVLVQDQGAITGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHPDFAPMEMTIQAALRKMH 363
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 364 DGHYLNLPVMNDAGEIVGMVDVLKLTYA 391
>gi|326480461|gb|EGE04471.1| CBS and PB1 domain-containing protein [Trichophyton equinum CBS
127.97]
Length = 696
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/268 (38%), Positives = 161/268 (60%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + + + ++MT+NP +DT A
Sbjct: 159 MAAKREDCVLVTDDDDRIAGIFTAKDLAYRVVGAGIRARDVTIVEIMTKNPLCARTDTSA 218
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 219 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 278
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E LR +M P+L +++ T+S +V A M E +
Sbjct: 279 ELGSS--QPQQIIQYVEALRSKMSGPTLESVL-NGLPPTTVSVRTSVKEAAALMKENHTT 335
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A D I AL MH
Sbjct: 336 ALLVQDQGSITGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHPDFAPTDMSIQAALRKMH 395
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 396 DGHYLNLPVMNESGEIVGMVDVLKLTYA 423
>gi|121702431|ref|XP_001269480.1| CBS/PB1 domain-containing protein [Aspergillus clavatus NRRL 1]
gi|119397623|gb|EAW08054.1| CBS and PB1 domain protein [Aspergillus clavatus NRRL 1]
Length = 587
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 162/268 (60%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + V+++MT+NP +DT A
Sbjct: 50 MAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGMGQKARDITVAEIMTKNPLCARTDTSA 109
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI +C YDA+ ++ERA + + A+EGV+
Sbjct: 110 TDALDLMVRKGFRHLPVMDENQDISGILDITRCFYDAMEKLERAYSSSRKLYDALEGVQT 169
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E LR +M P+L T++ + T+S +V A M E +
Sbjct: 170 ELGSS--QPQQIIQYVEALRSKMSGPTLETVL-DGLPPTTVSVRTSVRDAAALMKEHHTT 226
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKDI++RVI+ L + V +VMTP+P+ A D I AL MH
Sbjct: 227 ALLVQDQGSITGIFTSKDIVLRVIAPGLDPATCSVVRVMTPHPDFAPTDMSIQAALRKMH 286
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 287 DGHYLNLPVMNEAGEIVGMVDVLKLTYA 314
>gi|336269220|ref|XP_003349371.1| CBS/PB1 domain-containing protein [Sordaria macrospora k-hell]
Length = 681
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 163/268 (60%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ L ++++MT+NP +DT A
Sbjct: 119 MAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGAGLKSNTVTIAEIMTKNPLCARTDTSA 178
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 179 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYASSRRLYDALEGVQS 238
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
GTS P ++E LR +M P+L +++ T+S +V A + M E +
Sbjct: 239 ELGTSQ--PQQIIQYVEALRSKMSGPTLESVL-NGIPPTTVSVRTSVKEAAQLMKENHTT 295
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A ++ I AL MH
Sbjct: 296 AVLVQDQGAITGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHPDFAPMEMTIQAALRKMH 355
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 356 DGHYLNLPVMNDAGEIVGMVDVLKLTYA 383
>gi|345568238|gb|EGX51135.1| hypothetical protein AOL_s00054g511 [Arthrobotrys oligospora ATCC
24927]
Length = 637
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/265 (37%), Positives = 163/265 (61%), Gaps = 2/265 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ ++ + V+ +MT+NP +DT A
Sbjct: 93 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGGAIDARDVAVADIMTKNPLCARTDTSA 152
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC Y+A+ ++ER+ + + A+EGV++
Sbjct: 153 TDALDLMVRKGFRHLPVMDENQDISGVLDITKCFYEAMEKLERSYSMSRKLYDALEGVQE 212
Query: 120 HWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAV 179
G + ++E LR +M P+L T++ T++ +V A M E ++ +
Sbjct: 213 LGGAQPTQIIQYVEALRSKMAGPTLETVL-SGVPPTTVNVRTSVREAAALMKENHTTAVL 271
Query: 180 VTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGK 239
V + GI TSKD+++RVI+ L + V +VMTP+P+ A++D I AL MHDG
Sbjct: 272 VQDQGNITGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHPDFASMDLSIQAALRKMHDGH 331
Query: 240 FLHLPVVDRDGDVVDVVDVIHITHA 264
+L+LPV++ G++V +VDV+ +T+A
Sbjct: 332 YLNLPVMNEAGEIVGMVDVLKLTYA 356
>gi|119187931|ref|XP_001244572.1| CBS/PB1 domain-containing protein [Coccidioides immitis RS]
gi|392871287|gb|EAS33178.2| CBS and PB1 domain-containing protein [Coccidioides immitis RS]
Length = 655
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/268 (37%), Positives = 163/268 (60%), Gaps = 7/268 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + + ++++MT+NP +DT A
Sbjct: 114 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIRARDVTIAEIMTKNPLCARTDTSA 173
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 174 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 233
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E LR++M P+L +++ +T+S +V A M E +
Sbjct: 234 ELGSSQ--PQQIIQYVEALRQKMSGPTLESVL-NGLPPITVSVRTSVKDAAALMREHHTT 290
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKD+++RVI+ L + V +VMTP+P+ A D I AL MH
Sbjct: 291 ALLVQDQGSITGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHPDFAPTDMSIQAALRKMH 350
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
G +L+LPV++ G++V +VDV+ +T+A
Sbjct: 351 YGHYLNLPVMNESGEIVGMVDVLKLTYA 378
>gi|189194755|ref|XP_001933716.1| CBS/PB1 domain-containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979280|gb|EDU45906.1| CBS and PB1 domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 666
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 164/277 (59%), Gaps = 9/277 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + + + ++MT+NP +DT A
Sbjct: 118 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIKARDVTIEEIMTKNPLCAKTDTSA 177
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 178 TDALDLMVRKGFRHLPVMDENHDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQA 237
Query: 120 HWGTSISGPN-TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSA 178
G+S ++E +R++M P+L +++ T+S +V A M E ++
Sbjct: 238 EMGSSQPAEIINYVEAIRQKMSGPTLESVL-TGLPPTTVSVRTSVREAAALMKEHHTTAV 296
Query: 179 VVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDG 238
+V GI TSKD+++RVI+ L + V +VMTP+P+ A +D I AL MHDG
Sbjct: 297 LVQDNGSITGIFTSKDVVLRVIAAGLDPSTCSVVRVMTPHPDFAPMDMSIQSALRKMHDG 356
Query: 239 KFLHLPVVDRDGDVVDVVDVIHITHAAVATEILLDQI 275
+L+LPV+ G++V +VDV+ +T+A LDQI
Sbjct: 357 HYLNLPVMSDAGEIVGMVDVLKLTYAT------LDQI 387
>gi|330932518|ref|XP_003303808.1| CBS/PB1 domain-containing protein [Pyrenophora teres f. teres 0-1]
gi|311319951|gb|EFQ88097.1| hypothetical protein PTT_16169 [Pyrenophora teres f. teres 0-1]
Length = 666
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 164/277 (59%), Gaps = 9/277 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + + + ++MT+NP +DT A
Sbjct: 118 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIKARDVTIEEIMTKNPLCAKTDTSA 177
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 178 TDALDLMVRKGFRHLPVMDENHDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQA 237
Query: 120 HWGTSISGPN-TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSA 178
G+S ++E +R++M P+L +++ T+S +V A M E ++
Sbjct: 238 EMGSSQPAEIINYVEAIRQKMSGPTLESVL-TGLPPTTVSVRTSVREAAALMKEHHTTAV 296
Query: 179 VVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDG 238
+V GI TSKD+++RVI+ L + V +VMTP+P+ A +D I AL MHDG
Sbjct: 297 LVQDNGSITGIFTSKDVVLRVIAAGLDPSTCSVVRVMTPHPDFAPMDMSIQSALRKMHDG 356
Query: 239 KFLHLPVVDRDGDVVDVVDVIHITHAAVATEILLDQI 275
+L+LPV+ G++V +VDV+ +T+A LDQI
Sbjct: 357 HYLNLPVMSDAGEIVGMVDVLKLTYAT------LDQI 387
>gi|296419865|ref|XP_002839512.1| CBS/PB1 domain-containing protein [Tuber melanosporum Mel28]
gi|295635673|emb|CAZ83703.1| unnamed protein product [Tuber melanosporum]
Length = 642
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/269 (38%), Positives = 166/269 (61%), Gaps = 9/269 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + GI T KD+A RV+ +N + ++++MT+NP +DT A
Sbjct: 120 MAAKREDCVLVTDDEDRISGIFTAKDLAFRVVGAGVNARDVTIAQIMTKNPLCARTDTSA 179
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC Y+A+ ++ERA + + A+EGV+
Sbjct: 180 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYEAMEKLERAYASSRKLYDALEGVQS 239
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E LR++M P L +++ + + +S TV A M E +
Sbjct: 240 ELGSSQ--PQQIIHYVEALRQKMSGPDLQSVL-DGNPPTVVSVRTTVKDAAAMMKENHTT 296
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNL-PADSTLVEKVMTPNPECATIDTPIVDALHIM 235
+ +V GI TSKD+++RVI+ L PA+ ++V +VMTP+P+ A +D I AL M
Sbjct: 297 AVLVQDSGSITGIFTSKDVVLRVIAAGLDPANCSVV-RVMTPHPDFAPMDMSIQAALRKM 355
Query: 236 HDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
HDG +L+LPV++ ++V +VDV+ +T+A
Sbjct: 356 HDGHYLNLPVMNEAAEIVGMVDVLKLTYA 384
>gi|400601710|gb|EJP69335.1| CBS domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 664
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/269 (39%), Positives = 164/269 (60%), Gaps = 9/269 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ ++++MT+NP +DT A
Sbjct: 113 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGTGQKSSNVTIAEIMTKNPLCARTDTSA 172
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV
Sbjct: 173 TDALDLMVRKGFRHLPVMDENQDISGVLDITKCFYDAMEKLERAYSSSRKLYDALEGVHS 232
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
GT+ P ++E LR +M P+L T++ T+S +V A M E +
Sbjct: 233 ELGTNQ--PQQIIQYVEALRSKMSGPTLETVL-NGIPPTTVSVRTSVKEAAALMKENHTT 289
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNL-PADSTLVEKVMTPNPECATIDTPIVDALHIM 235
+ +V + GI TSKD+++RVI+ L PA+ ++V +VMTP+P+ A +D I AL M
Sbjct: 290 AVLVQDQGAITGIFTSKDVVLRVIAPGLDPANCSVV-RVMTPHPDFAPMDMTIQAALRKM 348
Query: 236 HDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
HDG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 349 HDGHYLNLPVMNDGGEIVGMVDVLKLTYA 377
>gi|440634832|gb|ELR04751.1| hypothetical protein GMDG_06979 [Geomyces destructans 20631-21]
Length = 675
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/269 (37%), Positives = 167/269 (62%), Gaps = 9/269 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + ++++MT+NP +DT A
Sbjct: 121 MAAKREDCVLVTDDDDRIAGIFTAKDLAYRVVGAGIKANSITIAEIMTKNPLCARTDTSA 180
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 181 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 240
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E LR +M P+L +++ + T+S +V A M E +
Sbjct: 241 ELGSSQ--PQQIIQYVEALRLKMSGPTLESVL-DGRPPTTVSVRTSVKEAAMLMKENHTT 297
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNL-PADSTLVEKVMTPNPECATIDTPIVDALHIM 235
+ +V + GI TSKD+++RVI+ + PA+ ++V +VMTP+P+ A ++ I AL M
Sbjct: 298 AVLVQDQGAITGIFTSKDVVLRVIAPGMDPANCSVV-RVMTPHPDFAPMEMTIQAALRKM 356
Query: 236 HDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
HDG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 357 HDGHYLNLPVMNDGGEIVGMVDVLKLTYA 385
>gi|451855607|gb|EMD68899.1| hypothetical protein COCSADRAFT_135182 [Cochliobolus sativus
ND90Pr]
Length = 665
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/279 (37%), Positives = 165/279 (59%), Gaps = 13/279 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + + + ++MT+NP +DT A
Sbjct: 118 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGNGIKARDVTIEEIMTKNPLCAKTDTSA 177
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 178 TDALDLMVRKGFRHLPVMDENHDISGILDITKCFYDAMEKLERAYASSRKLYDALEGVQA 237
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E +R++M P+L +++ T+S +V A M E +
Sbjct: 238 EMGSSQ--PQQIIQYVEAIRQKMSGPTLESVL-TGLPPTTVSVRTSVKEAAALMKENHTT 294
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V GI TSKD+++RVI+ L + V +VMTP+P+ A +D I AL MH
Sbjct: 295 AVLVQDNGSITGIFTSKDVVLRVIAAGLDPMTCSVVRVMTPHPDFAPVDMSIQSALRKMH 354
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILLDQI 275
DG +L+LPV+ G++V +VDV+ +T+A LDQI
Sbjct: 355 DGHYLNLPVMSDAGEIVGMVDVLKLTYAT------LDQI 387
>gi|226491131|ref|NP_001145822.1| uncharacterized protein LOC100279329 [Zea mays]
gi|219884563|gb|ACL52656.1| unknown [Zea mays]
Length = 306
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/106 (79%), Positives = 98/106 (92%)
Query: 163 VLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECA 222
VL A+KKMLEL++SSAVV +ENKP GILTS+DILMRVI+QNLP +ST VEKVMT +PECA
Sbjct: 2 VLTASKKMLELKVSSAVVAIENKPGGILTSRDILMRVIAQNLPPESTTVEKVMTQSPECA 61
Query: 223 TIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268
T+DTPI+DALH MHDGKFLHLPV+DRDG+VV VVDV+HITHAA+AT
Sbjct: 62 TVDTPILDALHTMHDGKFLHLPVLDRDGNVVTVVDVLHITHAAIAT 107
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 67/111 (60%), Gaps = 4/111 (3%)
Query: 20 GILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE 79
GILT +DI RVIA+ L E T V KVMT++P DT ++AL M GKF HLPV++
Sbjct: 27 GILTSRDILMRVIAQNLPPESTTVEKVMTQSPECATVDTPILDALHTMHDGKFLHLPVLD 86
Query: 80 -NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSIS-GP 128
+G V+ ++D+ + AIA + + G +A+ +++ W +++S GP
Sbjct: 87 RDGNVVTVVDVLHITHAAIATVGNSGAAGSEATSAM--MQRFWDSAMSIGP 135
>gi|452005050|gb|EMD97506.1| hypothetical protein COCHEDRAFT_1190356 [Cochliobolus
heterostrophus C5]
Length = 665
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/279 (37%), Positives = 165/279 (59%), Gaps = 13/279 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + + + ++MT+NP +DT A
Sbjct: 118 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGNGIKARDVTIEEIMTKNPLCAKTDTSA 177
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 178 TDALDLMVRKGFRHLPVMDENHDISGILDITKCFYDAMEKLERAYASSRKLYDALEGVQA 237
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+S P ++E +R++M P+L +++ T+S +V A M E +
Sbjct: 238 EMGSSQ--PQQIIQYVEAIRQKMSGPTLESVL-TGLPPTTVSVRTSVKEAAALMKENHTT 294
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V GI TSKD+++RVI+ L + V +VMTP+P+ A +D I AL MH
Sbjct: 295 AVLVQDNGSITGIFTSKDVVLRVIAAGLDPMTCSVVRVMTPHPDFAPVDMSIQSALRKMH 354
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILLDQI 275
DG +L+LPV+ G++V +VDV+ +T+A LDQI
Sbjct: 355 DGHYLNLPVMSDAGEIVGMVDVLKLTYAT------LDQI 387
>gi|156039609|ref|XP_001586912.1| CBS/PB1 domain-containing protein [Sclerotinia sclerotiorum 1980
UF-70]
gi|154697678|gb|EDN97416.1| hypothetical protein SS1G_11941 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 680
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/271 (38%), Positives = 161/271 (59%), Gaps = 13/271 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + ++++MT+NP +DT A
Sbjct: 126 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIKAANITIAEIMTKNPLCARTDTSA 185
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 186 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 245
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTI---IPEKSKVVTISPTDTVLMATKKMLEL 173
G+S P ++E LR +M P+L ++ IP + V S V A M E
Sbjct: 246 ELGSSQ--PQQIIQYVEALRSKMSGPTLESVLTGIPPTTVTVRTS----VKEAAALMKEN 299
Query: 174 RLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALH 233
++ +V GI TSKD+++RVI+ L + V +VMTP+P+ A +D I AL
Sbjct: 300 HTTAVLVQDGGSITGIFTSKDVVLRVIAPGLDPSNCSVVRVMTPHPDFAPMDMSIQAALR 359
Query: 234 IMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
MHDG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 360 KMHDGHYLNLPVMNDQGEIVGMVDVLKLTYA 390
>gi|154301338|ref|XP_001551082.1| CBS/PB1 domain-containing protein [Botryotinia fuckeliana B05.10]
Length = 622
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 104/271 (38%), Positives = 161/271 (59%), Gaps = 13/271 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + ++++MT+NP +DT A
Sbjct: 68 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIKAANITIAEIMTKNPLCARTDTSA 127
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 128 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 187
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTI---IPEKSKVVTISPTDTVLMATKKMLEL 173
G+S P ++E LR +M P+L ++ IP + V S V A M E
Sbjct: 188 ELGSS--QPQQIIQYVEALRSKMSGPTLESVLNGIPPTTVTVRTS----VKEAAALMKEN 241
Query: 174 RLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALH 233
++ +V GI TSKD+++RVI+ L + V +VMTP+P+ A +D I AL
Sbjct: 242 HTTAVLVQDGGSITGIFTSKDVVLRVIAPGLDPSNCSVVRVMTPHPDFAPMDMTIQAALR 301
Query: 234 IMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
MHDG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 302 KMHDGHYLNLPVMNDQGEIVGMVDVLKLTYA 332
>gi|347835680|emb|CCD50252.1| similar to CBS and PB1 domain-containing protein [Botryotinia
fuckeliana]
Length = 716
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 104/271 (38%), Positives = 161/271 (59%), Gaps = 13/271 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + ++++MT+NP +DT A
Sbjct: 162 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIKAANITIAEIMTKNPLCARTDTSA 221
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 222 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 281
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTI---IPEKSKVVTISPTDTVLMATKKMLEL 173
G+S P ++E LR +M P+L ++ IP + V S V A M E
Sbjct: 282 ELGSSQ--PQQIIQYVEALRSKMSGPTLESVLNGIPPTTVTVRTS----VKEAAALMKEN 335
Query: 174 RLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALH 233
++ +V GI TSKD+++RVI+ L + V +VMTP+P+ A +D I AL
Sbjct: 336 HTTAVLVQDGGSITGIFTSKDVVLRVIAPGLDPSNCSVVRVMTPHPDFAPMDMTIQAALR 395
Query: 234 IMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
MHDG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 396 KMHDGHYLNLPVMNDQGEIVGMVDVLKLTYA 426
>gi|348664773|gb|EGZ04613.1| hypothetical protein PHYSODRAFT_362634 [Phytophthora sojae]
Length = 3265
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 105/275 (38%), Positives = 162/275 (58%), Gaps = 20/275 (7%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + R A+L+T+ L GI +D D A RV+++ ++ V VMT NP+ V + A
Sbjct: 1267 MKSHRAAAVLVTNWEGALTGIFSDTDAARRVVSKGVDSARITVGSVMTPNPSCVSLEDSA 1326
Query: 61 VEALQKMVQGKFRHLPVV--ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118
V+A+ M+ GKFRHLPV+ +G ++ +L++AKCL+DAI R+E + ++
Sbjct: 1327 VDAMDIMLSGKFRHLPVISSHSGNIVGILNVAKCLHDAIRRVENMSSS----------LQ 1376
Query: 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVT--ISPTDTVLMATKKMLELRLS 176
+ G S + N + + E+M PSL ++ +V+ + TV AT M E R
Sbjct: 1377 QELGASSN--NVMLRGMLEKMLSPSLQDVVSAPGEVMPPLVYGNMTVYEATTYMAETRRP 1434
Query: 177 SAVVTVENKPR---GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALH 233
+ VV+ + + GI T KD+L RVI+++L ++T V +VMTPNPE A +T ++DA H
Sbjct: 1435 ALVVSSNPEFQELIGIFTPKDVLHRVIAEDLDVNTTTVSQVMTPNPESAAPETSVLDAFH 1494
Query: 234 IMHDGKFLHLPVVDRD-GDVVDVVDVIHITHAAVA 267
IMHDGKFL+LPVV D GD++ V DV+ I+ A+
Sbjct: 1495 IMHDGKFLNLPVVSPDSGDIMGVADVLSISLASFG 1529
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 156/274 (56%), Gaps = 7/274 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ++D +L+ +L GI+TD D+ RV++ L+ T V VMTRNP FV D A
Sbjct: 1949 MGRNKMDCVLVVSDEGMLNGIITDTDLTRRVVSENKPLDSTRVGDVMTRNPVFVSMDDPA 2008
Query: 61 VEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
++AL M++GKFRHLPVVE NG V+ +L IAKCLYDAI +ME++ + A+ +E K
Sbjct: 2009 IDALICMLEGKFRHLPVVERNGPVVGILSIAKCLYDAIRKMEKSEQSSAALRHTLEKEMK 2068
Query: 120 ---HWGTSISGPNTFIETLRERMFRPSLSTIIPEKS-KVVTISPTDTVLMATKKMLELRL 175
+ G G + + ++ +MF P + T+I E+ + +V +K+M +
Sbjct: 2069 SRVNGGARTGGVSQLLGSMVNKMFSPDIKTVIDEEGIDPPRVQRYTSVYEVSKQMSITKK 2128
Query: 176 SSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIM 235
++ VV + GI T K++L +V+++ LP +T V +VM T ++DA+H M
Sbjct: 2129 AALVVNNRGQYCGIFTPKEMLEKVLARGLPVHTTPVCEVMLEKDVTINGATSVIDAMHTM 2188
Query: 236 HDGKFLHLPVVDRDGDV--VDVVDVIHITHAAVA 267
HD K L+L V+ + + + V+DV+ +++ + A
Sbjct: 2189 HDHKTLYLAVMQSETNKQPIGVIDVLSLSYGSFA 2222
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 152/274 (55%), Gaps = 13/274 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +R DALL+ D L GILTD DI RV+A L EE PV VMTR+ +V + A
Sbjct: 1606 MKQKRTDALLVVDEAGGLNGILTDTDICRRVLALNLIPEEVPVCNVMTRDIKYVSPNDSA 1665
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
++AL M +G FRHLPVV+ G + +L+I KC+YD R+E A + + A++E K
Sbjct: 1666 IDALLSMQEGHFRHLPVVDGGSIAGVLNIGKCIYDVSKRLEHATQSTDQLKASLEKSGKS 1725
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIP-EKSKVVTISP----TDTVLMATKKMLELRL 175
S + + E++ P+L +I+ E T +P + V K M +
Sbjct: 1726 -----STLQQLLAPMLEKLATPTLGSILENETQNGSTPAPRLPKSSLVSDVVKAMASTKK 1780
Query: 176 SSAVVTVEN--KPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALH 233
++ +V N K GI + ++++ VI++ L +T VE+VM +PE AT T + D LH
Sbjct: 1781 AALIVDDFNFDKLVGIFSPNELVLNVIAKGLKTSATYVEEVMQNDPEIATPSTSVQDGLH 1840
Query: 234 IMHDGKFLHLPVV-DRDGDVVDVVDVIHITHAAV 266
IMHD + L+LPV+ D ++V +VDV+ +++ +
Sbjct: 1841 IMHDSRCLNLPVLKDDSNELVGMVDVLDLSYGTI 1874
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 156/269 (57%), Gaps = 5/269 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RV+A+++T L GILTD DI RV+A +++ E V+ VMT P+ V + A
Sbjct: 2706 MRQARVEAVVVTTEEGELRGILTDTDITRRVLAEDIDPESCSVASVMTTKPSCVYMEDQA 2765
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+EA+ KM++G+F+HLPV+ +G +LDI+KCLYDAI +E+ + +A A+ +
Sbjct: 2766 IEAITKMLEGRFKHLPVLGSDGTPQGMLDISKCLYDAITCLEKVQQSTEAAASEFS---R 2822
Query: 120 HWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAV 179
GT S + + E+M RP++ + + I+ T A K M + ++ V
Sbjct: 2823 DLGTG-SNLQRLLGPMMEKMVRPTVGDALDGEIMPPVINIHTTAARAAKLMANTKKAAIV 2881
Query: 180 VTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGK 239
+ E + G++T+KD+L +++++ L A++T VE+VMT +P+ + IVD L +HD
Sbjct: 2882 LGDEQELCGMVTTKDLLRKLVAKGLYAETTTVEEVMTMDPDLMGPNMSIVDGLRSLHDAG 2941
Query: 240 FLHLPVVDRDGDVVDVVDVIHITHAAVAT 268
L +PV+ DG+++ + DVI +++ T
Sbjct: 2942 QLFMPVLADDGEILGMADVICLSYGQFQT 2970
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 154/304 (50%), Gaps = 38/304 (12%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ + DA L+ + L GILTD D+ RV+A + V MT +P FV A
Sbjct: 2307 MSIAQTDAALIIGRDGGLLGILTDTDVTRRVVALGNDPFYVSVLDAMTPDPKFVDERDSA 2366
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
++A+ M++GKFRHLPVV E G V +L I KCLYDAI R+E+ + A +EK
Sbjct: 2367 MDAMFMMLEGKFRHLPVVDETGMVAGMLRIQKCLYDAITRIEKVQQSSSGSLRAR--LEK 2424
Query: 120 HW-----GTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELR 174
GT + + E++ P++ +I+ +++ +S DTV+ ++M R
Sbjct: 2425 QLQATGIGTGQGALKQLVAPMVEKLLSPTVDSILEDETLPPLVSEHDTVMEVARQMAASR 2484
Query: 175 LSSAVVTVEN-----------------------------KPRGILTSKDILMRVISQNLP 205
++ +V N K G+ T KD+L+RV L
Sbjct: 2485 KAALIVEDPNGDNSSSVSGGHRSSISGGGYDIGTSALTRKVLGVFTPKDLLLRVTGAGLD 2544
Query: 206 ADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGD-VVDVVDVIHITHA 264
A T V +VMTP+PE A T +VDALH+M++ FLHLP+V+ + D +V ++DV+ + +
Sbjct: 2545 AAETTVGQVMTPDPETAPPTTKLVDALHVMYEHNFLHLPIVNNETDTIVGMLDVLSLCYG 2604
Query: 265 AVAT 268
A+
Sbjct: 2605 TFAS 2608
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 141/284 (49%), Gaps = 30/284 (10%)
Query: 1 MAARRVDALLLTDSNA-LLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTL 59
MA+ + AL++ D N L GI + ++ VIA+ L T V +VM +P T
Sbjct: 1775 MASTKKAALIVDDFNFDKLVGIFSPNELVLNVIAKGLKTSATYVEEVMQNDPEIATPSTS 1834
Query: 60 AVEALQKMVQGKFRHLPVV--ENGEVIALLDIAKCLY---DAIARMERAAEKGKAIAAAV 114
+ L M + +LPV+ ++ E++ ++D+ Y DAI R
Sbjct: 1835 VQDGLHIMHDSRCLNLPVLKDDSNELVGMVDVLDLSYGTIDAIYGENR------------ 1882
Query: 115 EGVEKHWGTSIS--GPNTFIE-------TLRERMFRPSLSTIIPE--KSKVVTISPTDTV 163
E +++ W T++ P+ E TL R R S + + +KV+T+S + T+
Sbjct: 1883 EQMQEFWNTTLQLDQPSLPSEAGDRERTTLMSRAEREEKSRTVAKLRPTKVLTVSESTTI 1942
Query: 164 LMATKKMLELRLSSA-VVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECA 222
++ M ++ VV+ E GI+T D+ RV+S+N P DST V VMT NP
Sbjct: 1943 AELSRTMGRNKMDCVLVVSDEGMLNGIITDTDLTRRVVSENKPLDSTRVGDVMTRNPVFV 2002
Query: 223 TIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
++D P +DAL M +GKF HLPVV+R+G VV ++ + + A+
Sbjct: 2003 SMDDPAIDALICMLEGKFRHLPVVERNGPVVGILSIAKCLYDAI 2046
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 130/282 (46%), Gaps = 40/282 (14%)
Query: 20 GILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE 79
G+ T KD+ RV L+ ET V +VMT +P T V+AL M + F HLP+V
Sbjct: 2527 GVFTPKDLLLRVTGAGLDAAETTVGQVMTPDPETAPPTTKLVDALHVMYEHNFLHLPIVN 2586
Query: 80 N--GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHW---------------- 121
N ++ +LD+ Y A AAE GK I + W
Sbjct: 2587 NETDTIVGMLDVLSLCYGTFASGA-AAESGKPIDEDSD-WRSFWDVSLALGHDDDDFSEL 2644
Query: 122 ----GTSISG--PNTFIETLRERMF----------RPSLSTIIPEKSKVVTISPTDTVLM 165
G+ IS P + E+ M RP +S + P++ V I+ TV
Sbjct: 2645 ASMTGSRISRRRPGKYTESHHSSMMDHVPEPEGAMRP-VSMLRPQE--VTRINEFITVAE 2701
Query: 166 ATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATI 224
A K+M + R+ + VVT E RGILT DI RV+++++ +S V VMT P C +
Sbjct: 2702 AAKRMRQARVEAVVVTTEEGELRGILTDTDITRRVLAEDIDPESCSVASVMTTKPSCVYM 2761
Query: 225 DTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
+ ++A+ M +G+F HLPV+ DG ++D+ + A+
Sbjct: 2762 EDQAIEAITKMLEGRFKHLPVLGSDGTPQGMLDISKCLYDAI 2803
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 136/278 (48%), Gaps = 21/278 (7%)
Query: 8 ALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKM 67
A L+ ++ CGI T K++ +V+AR L + TPV +VM + T ++A+ M
Sbjct: 2129 AALVVNNRGQYCGIFTPKEMLEKVLARGLPVHTTPVCEVMLEKDVTINGATSVIDAMHTM 2188
Query: 68 VQGKFRHLPVVE---NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE------ 118
K +L V++ N + I ++D+ Y + A+ + +E A++E +
Sbjct: 2189 HDHKTLYLAVMQSETNKQPIGVIDVLSLSYGSFAK-GKPSEWKSFWNASLEATDDDDVSS 2247
Query: 119 KH-WGTSIS---GPNTFIETLRERMFRPSLSTIIP----EKSKVVTISPTDTVLMATKKM 170
+H + + S P++ + + R + + P SK +TIS T +V A K+M
Sbjct: 2248 QHSFRSGFSHNLAPSSAGMSQKGRQASLATGNVRPVSKLRPSKAITISETYSVADAAKEM 2307
Query: 171 LELRLSSA-VVTVENKPRGILTSKDILMRVIS-QNLPADSTLVEKVMTPNPECATIDTPI 228
+ +A ++ + GILT D+ RV++ N P ++++ MTP+P+
Sbjct: 2308 SIAQTDAALIIGRDGGLLGILTDTDVTRRVVALGNDPFYVSVLD-AMTPDPKFVDERDSA 2366
Query: 229 VDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
+DA+ +M +GKF HLPVVD G V ++ + + A+
Sbjct: 2367 MDAMFMMLEGKFRHLPVVDETGMVAGMLRIQKCLYDAI 2404
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 2/117 (1%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILMRVISQNLPADSTL 210
+K +T++ TVL A + M R ++ +VT E GI + D RV+S+ + +
Sbjct: 1249 AKAITVNEDATVLEAARMMKSHRAAAVLVTNWEGALTGIFSDTDAARRVVSKGVDSARIT 1308
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVV-DRDGDVVDVVDVIHITHAAV 266
V VMTPNP C +++ VDA+ IM GKF HLPV+ G++V +++V H A+
Sbjct: 1309 VGSVMTPNPSCVSLEDSAVDAMDIMLSGKFRHLPVISSHSGNIVGILNVAKCLHDAI 1365
>gi|322708062|gb|EFY99639.1| ribosomal protein subunit S4 [Metarhizium anisopliae ARSEF 23]
Length = 666
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/269 (38%), Positives = 161/269 (59%), Gaps = 9/269 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ ++ +MT+NP +DT A
Sbjct: 108 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGHKAANITIADIMTKNPLCARTDTSA 167
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV
Sbjct: 168 TDALDLMVRKGFRHLPVMDENQDISGVLDITKCFYDAMEKLERAYSSSRKLYDALEGVHS 227
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G S P ++E LR +M P+L +++ T+S +V A M E +
Sbjct: 228 ELGASQ--PQQIIQYVEALRSKMSGPTLESVL-NGIPPTTVSVRTSVKEAAALMKENHTT 284
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNL-PADSTLVEKVMTPNPECATIDTPIVDALHIM 235
+ +V GI TSKD+++RVI+ L PA+ ++V +VMTP+P+ A +D I AL M
Sbjct: 285 AVLVQDAGAITGIFTSKDVVLRVIAPGLDPANCSVV-RVMTPHPDFAPMDMTIQAALRKM 343
Query: 236 HDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
HDG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 344 HDGHYLNLPVMNDGGEIVGMVDVLKLTYA 372
>gi|226287801|gb|EEH43314.1| CBS and PB1 domain-containing protein [Paracoccidioides
brasiliensis Pb18]
Length = 661
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/280 (36%), Positives = 164/280 (58%), Gaps = 19/280 (6%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + + ++++MT+NP +DT A
Sbjct: 96 MAAKREDCVLVTDEDERIAGIFTAKDLAFRVVGAGIRARDVTIAEIMTKNPLCARTDTSA 155
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 156 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 215
Query: 120 HWGTSISGPN---TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+ + P ++E LR++M P+L T++ T+S +V A M E +
Sbjct: 216 ELGS--NQPQQIIQYVEALRQKMSGPTLETVL-NGLPPTTVSVRTSVREAAALMKENHTT 272
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKDI++RVI+ L ++ V +VMTP+P+ A D I AL MH
Sbjct: 273 ALLVQDQGSITGIFTSKDIVLRVIAPGLDPNTCSVVRVMTPHPDFAPTDMSIQAALRKMH 332
Query: 237 ------------DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 333 GAEETGLTISKLDGHYLNLPVMNEAGEIVGMVDVLKLTYA 372
>gi|225680402|gb|EEH18686.1| CBS and PB1 domain-containing protein [Paracoccidioides
brasiliensis Pb03]
Length = 676
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 103/280 (36%), Positives = 164/280 (58%), Gaps = 19/280 (6%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + + ++++MT+NP +DT A
Sbjct: 118 MAAKREDCVLVTDEDERIAGIFTAKDLAFRVVGAGIRARDVTIAEIMTKNPLCARTDTSA 177
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 178 TDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQS 237
Query: 120 HWGTSISGPN---TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+ + P ++E LR++M P+L T++ T+S +V A M E +
Sbjct: 238 ELGS--NQPQQIIQYVEALRQKMSGPTLETVL-NGLPPTTVSVRTSVREAAALMKENHTT 294
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKDI++RVI+ L ++ V +VMTP+P+ A D I AL MH
Sbjct: 295 ALLVQDQGSITGIFTSKDIVLRVIAPGLDPNTCSVVRVMTPHPDFAPTDMSIQAALRKMH 354
Query: 237 ------------DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
DG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 355 GAEETGLTISKLDGHYLNLPVMNEAGEIVGMVDVLKLTYA 394
>gi|322697495|gb|EFY89274.1| ribosomal protein subunit S4 [Metarhizium acridum CQMa 102]
Length = 694
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 104/269 (38%), Positives = 161/269 (59%), Gaps = 9/269 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ ++ +MT+NP +DT A
Sbjct: 136 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGHKAANITIADIMTKNPLCARTDTSA 195
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV
Sbjct: 196 TDALDLMVRKGFRHLPVMDENQDISGVLDITKCFYDAMEKLERAYSSSRKLYDALEGVHS 255
Query: 120 HWGTSISGPNT---FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G S P ++E LR +M P+L +++ T+S +V A M E +
Sbjct: 256 ELGASQ--PQQIIQYVEALRSKMSGPTLESVL-NGIPPTTVSVRTSVKEAAALMKENHTT 312
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNL-PADSTLVEKVMTPNPECATIDTPIVDALHIM 235
+ +V GI TSKD+++RVI+ L PA+ ++V +VMTP+P+ A +D I AL M
Sbjct: 313 AVLVQDAGAITGIFTSKDVVLRVIAPGLDPANCSVV-RVMTPHPDFAPMDMTIQAALRKM 371
Query: 236 HDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
HDG +L+LPV++ G++V +VDV+ +T+A
Sbjct: 372 HDGHYLNLPVMNDGGEIVGMVDVLKLTYA 400
>gi|301113386|ref|XP_002998463.1| myosin-like protein [Phytophthora infestans T30-4]
gi|262111764|gb|EEY69816.1| myosin-like protein [Phytophthora infestans T30-4]
Length = 3298
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/277 (37%), Positives = 163/277 (58%), Gaps = 24/277 (8%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + R A+L+T+ L GI +D D A RVI++ ++ + VMT NP+ V + A
Sbjct: 1286 MKSHRSAAVLVTNWEGALTGIFSDTDAARRVISKGMDPARVTIGSVMTPNPSCVSLEDSA 1345
Query: 61 VEALQKMVQGKFRHLPVV--ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118
V+A+ M+ GKFRHLPVV +G ++ +L++AKCL+DAI R+E + ++
Sbjct: 1346 VDAMDIMLSGKFRHLPVVSAHSGNIVGVLNVAKCLHDAIRRVENMSTS----------LQ 1395
Query: 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVT--ISPTDTVLMATKKMLELRLS 176
+ G S + N + + E+M PSL ++ + +V++ + TV AT M E R
Sbjct: 1396 QELGASSN--NAMLRGMLEKMLSPSLLDVLSKPGEVMSPLVYGNMTVYEATTYMAESRRP 1453
Query: 177 SAVVTVENKPR-----GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDA 231
+ VV+ + P GI T KD+L+RV++++L +T V VMTPNPE A +T ++DA
Sbjct: 1454 ALVVS--SNPEAPDLIGIFTPKDVLLRVVAEDLDVHTTPVSDVMTPNPESAAPETSVLDA 1511
Query: 232 LHIMHDGKFLHLPVVDRD-GDVVDVVDVIHITHAAVA 267
HIMHDGKFL+LPVV D G+++ V DV+ I+ A+
Sbjct: 1512 FHIMHDGKFLNLPVVAPDSGEILGVADVLSISLASFG 1548
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 155/274 (56%), Gaps = 13/274 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +R DALL+ D L GILTD DI RV+A LN EE PV VMTR+ +V + A
Sbjct: 1625 MKQKRTDALLVVDEAGGLNGILTDTDICRRVLALNLNPEEVPVCNVMTRDIKYVSPNDSA 1684
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
++AL M +G FRHLPVV+ G + +L+I KC+YD R+E A + + A++E K
Sbjct: 1685 IDALLSMQEGHFRHLPVVDGGSIAGVLNIGKCIYDVSKRLEHATQSTDQLKASLEKSGKS 1744
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTII-PEKSKVVTISP----TDTVLMATKKMLELRL 175
S + + E++ P+L +II E T +P + V K M +
Sbjct: 1745 -----STLQQLLAPMLEKLSTPTLGSIIESEAQNGSTPAPRLPKSSLVSDVAKAMASTKK 1799
Query: 176 SSAVVTVEN--KPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALH 233
++ +V N K G+ + ++++ VI++ L A +T VE+VM +PE AT T ++D LH
Sbjct: 1800 AALIVDDINFDKLVGVFSPNELVLNVIAKGLKASATYVEEVMLNDPEIATPSTSVLDGLH 1859
Query: 234 IMHDGKFLHLPVV-DRDGDVVDVVDVIHITHAAV 266
IMHD + L+LPV+ D ++V +VDV+ +++ +
Sbjct: 1860 IMHDSRILNLPVLKDDSNELVGMVDVLDLSYGTI 1893
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 156/274 (56%), Gaps = 7/274 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ++D +L+ +L GI+TD D+ RV++ ++ T V VMTRNP FV D A
Sbjct: 1968 MGRNKMDCVLVVSEEGMLNGIITDTDLTRRVVSENRPVDSTLVGDVMTRNPVFVSMDDPA 2027
Query: 61 VEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
++AL M++GKFRHLPVVE NG V+ +L+IAKCLYDAI +ME++ + A+ +E K
Sbjct: 2028 IDALISMLEGKFRHLPVVERNGPVVGILNIAKCLYDAIRKMEKSEQSSAALRHTLEKEMK 2087
Query: 120 ---HWGTSISGPNTFIETLRERMFRPSLSTIIPEKS-KVVTISPTDTVLMATKKMLELRL 175
+ G G + + ++ +MF P + T+I E+ + + +V +K+M +
Sbjct: 2088 SRVNGGARAGGVSQLLGSMVNKMFSPDIKTVIEEEGVEPPRVQRFTSVFEVSKQMAVTKK 2147
Query: 176 SSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIM 235
+ VV + GI T K++L +V+++ LP +T V +VM T ++DA+H M
Sbjct: 2148 GALVVNNRGQFCGIFTPKEMLEKVLARGLPVHTTPVCEVMLEKDVTINGATSVIDAMHTM 2207
Query: 236 HDGKFLHLPVVDRD--GDVVDVVDVIHITHAAVA 267
HD K L+L V+ + + ++DV+ +++ + A
Sbjct: 2208 HDHKTLYLAVMQTETSKQPIGLIDVLSLSYGSFA 2241
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 155/269 (57%), Gaps = 5/269 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RV+A+++T L GILTD DI RV+A +++ E V+ VMT P V + A
Sbjct: 2725 MRQARVEAVVVTTEEGELRGILTDTDITRRVLAEDIDPESCSVASVMTTKPMCVYMEDQA 2784
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+EA+ KM++G+F+HLPV+ +G +LDI+KCLYDAI +E+ + +A A+ +
Sbjct: 2785 IEAITKMLEGRFKHLPVLGSDGTPQGMLDISKCLYDAITCLEKVQQSTEAAASEFS---R 2841
Query: 120 HWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAV 179
GT S + + E+M RP++ + + ++ T A K M + ++ V
Sbjct: 2842 DLGTG-SNLQRLLGPMMEKMVRPTVGDALDGEIMPPVVNIHTTAARAAKLMANTKKAAIV 2900
Query: 180 VTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGK 239
+ E + G++T+KD+L +++++ L A++T VE+VMT +P+ D IVD L +HD
Sbjct: 2901 LGDEQELCGMVTTKDLLRKLVAKGLYAETTTVEEVMTVDPDLMGPDMSIVDGLRSLHDAG 2960
Query: 240 FLHLPVVDRDGDVVDVVDVIHITHAAVAT 268
L +PV+ DG+++ + DVI +++ T
Sbjct: 2961 QLFMPVLADDGEILGMADVICLSYGQFQT 2989
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 155/304 (50%), Gaps = 38/304 (12%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ + DA L+ + L GILTD D+ RV+A + V MT +P FV A
Sbjct: 2326 MSNAQTDAALVIGRDGGLLGILTDTDVTRRVVALGNDPFYVSVCDAMTPDPKFVDERDSA 2385
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
++A+ M++GKFRHLPVV E G V +L I KCLYDAI R+E+ + + + + +EK
Sbjct: 2386 MDAMFMMLEGKFRHLPVVDETGMVAGMLRIQKCLYDAITRIEKVQQ--SSSGSLRQRLEK 2443
Query: 120 HW-----GTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELR 174
GT + + E++ P++ I+ +++ +S DTV+ ++M R
Sbjct: 2444 QLQATGIGTGQGALKQLVAPMVEKLLSPTVDQILEDETLPPLVSEHDTVMEVARQMAASR 2503
Query: 175 LSSAVVTVEN-----------------------------KPRGILTSKDILMRVISQNLP 205
++ +V N K G+ T KD+L+RV L
Sbjct: 2504 KAALIVEDPNADNSSSVSGGHRSSISGGGYDIGTSALTRKVLGVFTPKDLLLRVTGAGLD 2563
Query: 206 ADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD-GDVVDVVDVIHITHA 264
A T V +VMTP+PE A +T +VDALHIM++ FLHLPVV+ + +V ++DV+ + +
Sbjct: 2564 AAETTVGQVMTPDPETAPPNTRLVDALHIMYEHNFLHLPVVNNETATIVGMLDVLSLCYG 2623
Query: 265 AVAT 268
A+
Sbjct: 2624 TFAS 2627
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 135/281 (48%), Gaps = 38/281 (13%)
Query: 20 GILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE 79
G+ T KD+ RV L+ ET V +VMT +P +T V+AL M + F HLPVV
Sbjct: 2546 GVFTPKDLLLRVTGAGLDAAETTVGQVMTPDPETAPPNTRLVDALHIMYEHNFLHLPVVN 2605
Query: 80 N--GEVIALLDIAKCLYDAIARMERAAEKGKAI------------AAAVEGVEKHWG--T 123
N ++ +LD+ Y A AAE GK + + A+ E +
Sbjct: 2606 NETATIVGMLDVLSLCYGTFASGA-AAESGKPVDEDSDWRAFWDVSLALGHDEDDFSELA 2664
Query: 124 SISG-------PNTFIETLRERMF----------RPSLSTIIPEKSKVVTISPTDTVLMA 166
S++G P + E+ M RP +S + P++ V I+ TV A
Sbjct: 2665 SVTGSRVSRRRPGKYTESHHSSMMDHIPEPEGAMRP-VSMLRPQE--VTRINEFITVAEA 2721
Query: 167 TKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATID 225
K+M + R+ + VVT E + RGILT DI RV+++++ +S V VMT P C ++
Sbjct: 2722 AKRMRQARVEAVVVTTEEGELRGILTDTDITRRVLAEDIDPESCSVASVMTTKPMCVYME 2781
Query: 226 TPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
++A+ M +G+F HLPV+ DG ++D+ + A+
Sbjct: 2782 DQAIEAITKMLEGRFKHLPVLGSDGTPQGMLDISKCLYDAI 2822
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 139/284 (48%), Gaps = 30/284 (10%)
Query: 1 MAARRVDALLLTDSNA-LLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTL 59
MA+ + AL++ D N L G+ + ++ VIA+ L T V +VM +P T
Sbjct: 1794 MASTKKAALIVDDINFDKLVGVFSPNELVLNVIAKGLKASATYVEEVMLNDPEIATPSTS 1853
Query: 60 AVEALQKMVQGKFRHLPVV--ENGEVIALLDIAKCLY---DAIARMERAAEKGKAIAAAV 114
++ L M + +LPV+ ++ E++ ++D+ Y DAI R
Sbjct: 1854 VLDGLHIMHDSRILNLPVLKDDSNELVGMVDVLDLSYGTIDAIYGENR------------ 1901
Query: 115 EGVEKHWGTSIS--GPNTFIETL-RERMFRPSLSTIIPEKSKVVTISPTDTVLMA----- 166
E +++ W T++ P+ E RER S + + V + PT + +
Sbjct: 1902 EQMQEFWNTTLQLDQPSLPSEAGDRERTTLLSRAEREEKSRTVAKLRPTKVLTVVETTTV 1961
Query: 167 ---TKKMLELRLSSA-VVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECA 222
++ M ++ VV+ E GI+T D+ RV+S+N P DSTLV VMT NP
Sbjct: 1962 AELSRTMGRNKMDCVLVVSEEGMLNGIITDTDLTRRVVSENRPVDSTLVGDVMTRNPVFV 2021
Query: 223 TIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
++D P +DAL M +GKF HLPVV+R+G VV ++++ + A+
Sbjct: 2022 SMDDPAIDALISMLEGKFRHLPVVERNGPVVGILNIAKCLYDAI 2065
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 127/279 (45%), Gaps = 27/279 (9%)
Query: 10 LLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQ 69
L+ ++ CGI T K++ +V+AR L + TPV +VM + T ++A+ M
Sbjct: 2150 LVVNNRGQFCGIFTPKEMLEKVLARGLPVHTTPVCEVMLEKDVTINGATSVIDAMHTMHD 2209
Query: 70 GKFRHLPVVE---NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSIS 126
K +L V++ + + I L+D+ Y + A+ + +E+ A+ E + +S
Sbjct: 2210 HKTLYLAVMQTETSKQPIGLIDVLSLSYGSFAK-GKPSERKSFWNASFEATDD---DDVS 2265
Query: 127 GPNTFIETLRERMFRPSLSTIIPEK------------------SKVVTISPTDTVLMATK 168
++F + PS S + + SK +TIS T +V A K
Sbjct: 2266 SQHSFRSGFSHNL-APSSSGLSQKGRQAALATGNVRPVSKLRPSKAITISETFSVADAAK 2324
Query: 169 KMLELRLSSA-VVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTP 227
+M + +A V+ + GILT D+ RV++ V MTP+P+
Sbjct: 2325 EMSNAQTDAALVIGRDGGLLGILTDTDVTRRVVALGNDPFYVSVCDAMTPDPKFVDERDS 2384
Query: 228 IVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
+DA+ +M +GKF HLPVVD G V ++ + + A+
Sbjct: 2385 AMDAMFMMLEGKFRHLPVVDETGMVAGMLRIQKCLYDAI 2423
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 2/117 (1%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILMRVISQNLPADSTL 210
+K +T++ TVL A + M R ++ +VT E GI + D RVIS+ +
Sbjct: 1268 AKAITVNQEATVLEAARLMKSHRSAAVLVTNWEGALTGIFSDTDAARRVISKGMDPARVT 1327
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD-RDGDVVDVVDVIHITHAAV 266
+ VMTPNP C +++ VDA+ IM GKF HLPVV G++V V++V H A+
Sbjct: 1328 IGSVMTPNPSCVSLEDSAVDAMDIMLSGKFRHLPVVSAHSGNIVGVLNVAKCLHDAI 1384
>gi|50550993|ref|XP_502970.1| CBS/PB1 domain-containing protein [Yarrowia lipolytica CLIB122]
gi|49648838|emb|CAG81162.1| YALI0D18106p [Yarrowia lipolytica CLIB122]
Length = 593
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/268 (35%), Positives = 164/268 (61%), Gaps = 4/268 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+A+R + +L+ + + + GI T KD+A +V+ L+ T V ++MTRNP + ++T A
Sbjct: 90 MSAKRENCVLVIEDDNI-SGIFTAKDLAFKVVGSGLDASVTTVDQIMTRNPLYATTNTSA 148
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
E L MV FRHLPV+ EN EV +LDI KC ++A+ ++ERA + + + A+EGV+
Sbjct: 149 TEGLNLMVNKGFRHLPVMDENNEVSGILDITKCYHEAMEKLERAYQSSRKLYDALEGVQT 208
Query: 120 HWGTSISGPN-TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSA 178
G+S ++E L++RM P L +++ + + + TV A M + ++
Sbjct: 209 ELGSSQPAQIINYVEALKQRMEGPDLESVL-DGTPPTYVDVRTTVFEAASLMKQNHTTAV 267
Query: 179 VVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDG 238
+VT ++ +GI TSKD+++RVI+ L + V +VMTP+P+ A + I AL MH+G
Sbjct: 268 LVTDHDQVKGIFTSKDVVLRVIAAGLDPKNCSVIRVMTPHPDVAPQNMSIQVALRTMHEG 327
Query: 239 KFLHLPVVDRDGDVVDVVDVIHITHAAV 266
++L+LPV+ + ++V VVDV+ +T+A +
Sbjct: 328 RYLNLPVMGPNAELVGVVDVLKLTYATL 355
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 64/115 (55%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
S VTI P +V A + M R + +V ++ GI T+KD+ +V+ L A T V
Sbjct: 72 SPAVTIKPKTSVSEAAQLMSAKRENCVLVIEDDNISGIFTAKDLAFKVVGSGLDASVTTV 131
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
+++MT NP AT +T + L++M + F HLPV+D + +V ++D+ H A+
Sbjct: 132 DQIMTRNPLYATTNTSATEGLNLMVNKGFRHLPVMDENNEVSGILDITKCYHEAM 186
>gi|422295637|gb|EKU22936.1| hypothetical protein NGA_2021300 [Nannochloropsis gaditana CCMP526]
Length = 549
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 110/285 (38%), Positives = 153/285 (53%), Gaps = 26/285 (9%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +R DA L+T + GILTD D+ RVIA+ ETP+S +MT NP V D+ +
Sbjct: 16 MVHKRTDAALVTSRTGKVLGILTDNDVTRRVIAQYRAETETPISTIMTENPKSVSQDSDS 75
Query: 61 VEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEK--------GKAIA 111
++AL MV+G+FRHLPV+ +G+V+ LLDIAKCL DAI R+ER EK +A
Sbjct: 76 IDALTTMVKGRFRHLPVMGPHGQVVGLLDIAKCLSDAITRLERREEKTASSLAAASAGVA 135
Query: 112 AAVEGVEKHWGTSISGPNTFIETLRE-----RMFRPSLSTIIPEKSKVVTI-SPTDTVLM 165
G H ++ L+E R PSL ++ ++ I T V
Sbjct: 136 QGGHGALMH----------LMQLLQEQSEPGRDCNPSLRALLGQQGAPTNIVRATVNVRT 185
Query: 166 ATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATID 225
A + M + R + VV + GI T KD+L RV+SQ L D T V VMT P+ +
Sbjct: 186 AAEVMSKCRKAVLVVDEDESLVGIFTPKDMLGRVVSQELSPDFTAVSSVMTARPDTIEAE 245
Query: 226 TPIVDALHIMHDGKFLHLPVVD-RDGDVVDVVDVIHITHAAVATE 269
+++AL++M + +LHLPV D RDG VV +VDV+ I H E
Sbjct: 246 ATVLEALYMMRENHYLHLPVTDSRDGSVVGLVDVMEIVHVVCGRE 290
>gi|387219401|gb|AFJ69409.1| hypothetical protein NGATSA_2021300 [Nannochloropsis gaditana
CCMP526]
Length = 534
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/285 (38%), Positives = 153/285 (53%), Gaps = 26/285 (9%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +R DA L+T + GILTD D+ RVIA+ ETP+S +MT NP V D+ +
Sbjct: 1 MVHKRTDAALVTSRTGKVLGILTDNDVTRRVIAQYRAETETPISTIMTENPKSVSQDSDS 60
Query: 61 VEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEK--------GKAIA 111
++AL MV+G+FRHLPV+ +G+V+ LLDIAKCL DAI R+ER EK +A
Sbjct: 61 IDALTTMVKGRFRHLPVMGPHGQVVGLLDIAKCLSDAITRLERREEKTASSLAAASAGVA 120
Query: 112 AAVEGVEKHWGTSISGPNTFIETLRE-----RMFRPSLSTIIPEKSKVVTI-SPTDTVLM 165
G H ++ L+E R PSL ++ ++ I T V
Sbjct: 121 QGGHGALMH----------LMQLLQEQSEPGRDCNPSLRALLGQQGAPTNIVRATVNVRT 170
Query: 166 ATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATID 225
A + M + R + VV + GI T KD+L RV+SQ L D T V VMT P+ +
Sbjct: 171 AAEVMSKCRKAVLVVDEDESLVGIFTPKDMLGRVVSQELSPDFTAVSSVMTARPDTIEAE 230
Query: 226 TPIVDALHIMHDGKFLHLPVVD-RDGDVVDVVDVIHITHAAVATE 269
+++AL++M + +LHLPV D RDG VV +VDV+ I H E
Sbjct: 231 ATVLEALYMMRENHYLHLPVTDSRDGSVVGLVDVMEIVHVVCGRE 275
>gi|353227418|emb|CCA77926.1| hypothetical protein PIIN_00640 [Piriformospora indica DSM 11827]
Length = 672
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/300 (36%), Positives = 161/300 (53%), Gaps = 38/300 (12%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRV------------------IARELNLEETPV 43
AA+R D +L+ D L GI T KD+A RV A L+ T V
Sbjct: 99 AAKRTDCVLVVDEEEGLSGIFTAKDLAFRVSLPSSFECQPTDRVFEQVTAMGLDPRTTLV 158
Query: 44 SKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMER 102
S +MT NP T A EALQ MVQ FRHLPV ++G V+ LLDI K ++A+ ++ER
Sbjct: 159 STIMTPNPMVTRDTTSATEALQLMVQRGFRHLPVCNDDGNVVGLLDITKVFHEALDKIER 218
Query: 103 AAEKGKAIAAAVEGVEKHWGTSISGPNT-----FIETLRERMFRPSLSTIIPEKSKVVTI 157
+ + + +A+E V+ S P F+E+LR++ P LST++ +++ T+
Sbjct: 219 GSSASQKLYSALESVQTELDGVASNPQAAAMMAFVESLRDKTALPDLSTVMDSRTQPATV 278
Query: 158 SPTDTVLMATKKMLELRLSSAVVTVEN-------------KPRGILTSKDILMRVISQNL 204
P TV A + M E R ++AV +E K GI TSKDI++RVI+ L
Sbjct: 279 GPRTTVRDAARLMKENR-TTAVCVMEGGANTAGQPTGAPAKIAGIFTSKDIVLRVIAAGL 337
Query: 205 PADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
V +VMTP+P+ A I DAL M++G +L+LPVV+ DG +V ++DV+ +T+A
Sbjct: 338 DPGRCSVVRVMTPHPDVAPPSMTIQDALKKMYNGHYLNLPVVESDGRLVAIIDVLKLTYA 397
>gi|387219477|gb|AFJ69447.1| myosin-like protein, partial [Nannochloropsis gaditana CCMP526]
Length = 349
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 155/290 (53%), Gaps = 29/290 (10%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RR A+LLT + L GILTD D+ RV+++EL++EET VMT NPT V +
Sbjct: 27 MVERRAAAVLLTGKDGTLSGILTDTDVTRRVVSKELSVEETTAEDVMTANPTTVTLEDDC 86
Query: 61 VEALQKMVQGKFRHLPVVENGE-VIALLDIAKCLYDAIARMERAAEK-----GKAIAAAV 114
++AL MV+G FRHLPV+++G+ V+ LDIAKCL DAI R+E+ E G +
Sbjct: 87 LDALTLMVRGSFRHLPVLDSGDAVVGCLDIAKCLNDAITRLEKMEEHREKQLGNGTNKQL 146
Query: 115 E------------GVEKHWGTSISGPNTFIETLRERMFR--------PSLSTIIPEKSKV 154
E G KH +S T ++ L PS+ +++ S
Sbjct: 147 EAAAMAMALAGRGGGGKHQTALVS---TLMQLLSSSGGNGEDGGSKLPSVGSMLSGASST 203
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKV 214
+S +VL A+++M R + VV + G++T KD+L RV+++ L ++ +V
Sbjct: 204 ALLSKEASVLEASREMAASRKACLVVGENGELIGLVTFKDVLGRVVAKGLSPGGAILGEV 263
Query: 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
MTP P T D ++DAL+ M DG FL+LPVV+ G + ++ + I +
Sbjct: 264 MTPKPASVTPDMSLLDALYTMRDGHFLNLPVVEESGRALGLLSAMEIVQS 313
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 170 MLELRLSSAVVTVENKP-RGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPI 228
M+E R ++ ++T ++ GILT D+ RV+S+ L + T E VMT NP T++
Sbjct: 27 MVERRAAAVLLTGKDGTLSGILTDTDVTRRVVSKELSVEETTAEDVMTANPTTVTLEDDC 86
Query: 229 VDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
+DAL +M G F HLPV+D VV +D+ + A+
Sbjct: 87 LDALTLMVRGSFRHLPVLDSGDAVVGCLDIAKCLNDAI 124
>gi|320580871|gb|EFW95093.1| hypothetical protein HPODL_3465 [Ogataea parapolymorpha DL-1]
Length = 624
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 158/271 (58%), Gaps = 9/271 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ + + +L+ D + LL GI T KD+A R++ LN +T + ++MT NP TLA
Sbjct: 101 MSVTKENCVLVVDEDGLLSGIFTAKDLAFRIVGANLNANQTTIDQIMTPNPMCAKVSTLA 160
Query: 61 VEALQKMVQGKFRHLPVVENG-EVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV FRHLPVV G +++ +LDI KC +A+ ++ER E K + A+EGV +
Sbjct: 161 SDALSLMVNKGFRHLPVVNEGNQIVGVLDITKCYNEAMTKLERMYESSKRLYDAMEGVTE 220
Query: 120 HWGTSISGPN--TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSS 177
GT+ + + E LR + P+L++++ E++ V TV A M + + ++
Sbjct: 221 ELGTANQPVHVIKYFENLRNLVSGPTLNSVLSERTIPVCCDIKTTVYEAAILMRDNK-TT 279
Query: 178 AVVTVENKPR----GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALH 233
AV+ ++K GI TSKDI++RVI+ + + V +VMTP P A + I AL
Sbjct: 280 AVLVKDSKNNDEVTGIFTSKDIVLRVIAAGIDPRTCSVIRVMTPKPSYALASSSIHQALR 339
Query: 234 IMHDGKFLHLPVVDRDG-DVVDVVDVIHITH 263
M +G++L+LPVVD D ++V VVDV+ +T+
Sbjct: 340 QMFEGRYLNLPVVDDDNSEIVGVVDVLKLTY 370
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVISQNLPADSTL 210
S+ V PT+TV A + M + + +V E+ GI T+KD+ R++ NL A+ T
Sbjct: 83 SEAVICKPTNTVYEAAQLMSVTKENCVLVVDEDGLLSGIFTAKDLAFRIVGANLNANQTT 142
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
++++MTPNP CA + T DAL +M + F HLPVV+ +V V+D+ + A+
Sbjct: 143 IDQIMTPNPMCAKVSTLASDALSLMVNKGFRHLPVVNEGNQIVGVLDITKCYNEAM 198
>gi|325182681|emb|CCA17136.1| myosin 29 putative [Albugo laibachii Nc14]
Length = 3123
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 159/269 (59%), Gaps = 5/269 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RVDA+++T + L GILTD DI RV+ + L+ + V+ VMT NP V +D A
Sbjct: 2598 MRHGRVDAVVVTTDDGDLRGILTDTDITRRVLGKHLDPDTCCVATVMTVNPCCVQADESA 2657
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+EA+ KM++G+F+HLPVV +NG + +LDI+KCLYDAI ME+ + +A AA + +
Sbjct: 2658 IEAITKMLEGRFKHLPVVGKNGSISGILDISKCLYDAIVCMEKVQQSTEA--AASDFAKD 2715
Query: 120 HWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAV 179
H G++ + + + E++ P+++ I+ E+ +SP V A M + R ++ V
Sbjct: 2716 HSGSA--SLHRMLAPMMEKLVSPTIAMILKEEGDPPVVSPHAKVTEAAVLMTKHRKAAIV 2773
Query: 180 VTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGK 239
+ G++T KD+L +V+++ L AD TLVE +MT +PE + ++D L M+D
Sbjct: 2774 LDHSKSVIGMVTPKDLLRKVVAKGLCADDTLVETIMTVDPEYLLPNAKVLDGLRGMYDAG 2833
Query: 240 FLHLPVVDRDGDVVDVVDVIHITHAAVAT 268
L +PV+ G + +VDV+ +++ +
Sbjct: 2834 QLFMPVITESGQLHGMVDVLSLSYGQFSN 2862
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 150/271 (55%), Gaps = 18/271 (6%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M R A+L+ ++ L GI TD D A RV+ R L+ T + VMT P FV + A
Sbjct: 1184 MQRNRTSAVLVVCDDSALSGIFTDTDTAQRVLGRGLDPSATLIGAVMTPKPKFVTLEDSA 1243
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMER-AAEKGKAIAAAVEGVE 118
++AL MV G FRHLPVV + G+V+ +L++A+CLYDAI +MER A++ K +A
Sbjct: 1244 MDALDMMVTGVFRHLPVVSKEGQVVGILNVARCLYDAIQQMERLASDLQKELAH------ 1297
Query: 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSA 178
+ + + ERM PSL ++ +S V + T + +M R +
Sbjct: 1298 -------TPADAHVRDTLERMLSPSLQHVLRGRSPPVVVEKTCLLADVVPEMARTRYPAL 1350
Query: 179 VVTVENKPR-GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHD 237
++ + + GILTSKD+L RV+++ + T++ VMT NP+ + + ++ A H+MH+
Sbjct: 1351 IIDSDTRQLCGILTSKDLLHRVVAKRVGM-HTMIGDVMTHNPDSGSPEMTLLSAFHVMHE 1409
Query: 238 GKFLHLPVVDRDGD-VVDVVDVIHITHAAVA 267
G FLHLPVVD D +V V DV+ I A+
Sbjct: 1410 GNFLHLPVVDPDTKMIVGVTDVLSIVSASFG 1440
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 146/271 (53%), Gaps = 18/271 (6%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RR +L+TD LCGI+TD D+ RV++ + +++ PV +MTR+PTFV + A
Sbjct: 1856 MTRRRSQCVLVTDEEGTLCGIVTDTDLTHRVVSEKRSMDGCPVRAIMTRDPTFVSAQDSA 1915
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+ AL M++GKFRHLPVV ++ +L I CL++AI +ME+A + KA ++
Sbjct: 1916 LNALCIMLEGKFRHLPVVNAKSIVGILHIGNCLFEAIQKMEKAQDSTKARQGSL------ 1969
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
G F + ++ L +++ E + + P +V +K+M R ++ VV
Sbjct: 1970 ------GARAFRGSFLGQILSSKLRSVLQEDTPAPRVDPFTSVYEVSKRMTASRKAAMVV 2023
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
+ GI T K +L V+S+ P +T V +VM N +T I+DA+ +H K
Sbjct: 2024 NSMGEFMGIFTPKSLLENVLSRGRPMYTTPVYEVMEQNAPPLYSETLIMDAMCTIHQAKA 2083
Query: 241 LHLPVVDRDGDV----VDVVDVIHITHAAVA 267
+LPV+ + +V V +VDV+ +++ + A
Sbjct: 2084 FYLPVL--ESEVIPLPVGIVDVLSLSYGSFA 2112
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 160/310 (51%), Gaps = 38/310 (12%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ DA L+ +L GILTD D+ RV+A + T ++ VMT +P FV + A
Sbjct: 2198 MSQSHADAALVISKEGVLSGILTDTDVTHRVVALGNDPNVTCIADVMTSSPKFVDENDSA 2257
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
++A+ M++GKFRHLPVV++ G V +L I KCL+DA+ R+E+A K + E VE
Sbjct: 2258 MQAMYIMLEGKFRHLPVVDSRGTVSGILRIQKCLHDAVIRLEKAQRKSSGVLQ--ENVES 2315
Query: 120 HW-----GTSISGPNTFIETLR---ERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKML 171
G + G + ++ + +++ P+L +I+ + ++VL ++KM
Sbjct: 2316 QLRSTLLGAKLHGEQSIMQLVTPMVQKLLSPTLESILQNTEMPPVVYSCESVLSVSRKMA 2375
Query: 172 ELRLSSAVVT-VENKPR-------------------------GILTSKDILMRVISQNLP 205
+ ++ VV VE+ P G+LT+ DILMRVI+ NL
Sbjct: 2376 FAKKAALVVEDVESAPLIGIAASVNQTKARRDSDGTAGKRLIGLLTANDILMRVIASNLD 2435
Query: 206 ADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVV-DRDGDVVDVVDVIHITHA 264
+TLV VMT P+ +VDALH+MH+ LHLPVV D G ++ ++DV+ + +
Sbjct: 2436 PSTTLVADVMTSTPDTVPPSMSLVDALHLMHEHHTLHLPVVEDGSGIILGLIDVLSLCYG 2495
Query: 265 AVATEILLDQ 274
A + Q
Sbjct: 2496 TFAQGAAVSQ 2505
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 137/251 (54%), Gaps = 17/251 (6%)
Query: 17 LLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLP 76
L+ GILTD DI RV+A+ L+ T V+ VMT N FV A++A+ M QG FRHLP
Sbjct: 1534 LMRGILTDTDICWRVLAKHLDPYRTLVASVMTENIKFVAPQDDALDAMLAMHQGHFRHLP 1593
Query: 77 VVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLR 136
VV+NG + +L+I +CLYD R+E A + + ++ S + +
Sbjct: 1594 VVDNGAITGVLNIGRCLYDVAKRLETANASNEKLKSSFHS---------SKITQMLRPML 1644
Query: 137 ERMFRPSLSTIIPEKSKVVTISP----TDTVLMATKKMLELRLSSAVVTVENKPR--GIL 190
E++ P+L T++ E+ + SP +V +A + M R ++ VV + R G+
Sbjct: 1645 EKLASPTLRTLLDEQEEAGAASPRIPMGTSVQIALECMATARKAALVVDPADHDRLCGLF 1704
Query: 191 TSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVV-DRD 249
T ++L+ VI L +T +E VM +PE AT T +++AL IMHD + L+LPV+ D
Sbjct: 1705 TPNELLLGVIGNRLDPKTTRIESVMLTDPEVATASTTVLEALRIMHDSQCLNLPVICDNS 1764
Query: 250 GD-VVDVVDVI 259
D + +VDV+
Sbjct: 1765 HDTIAGLVDVL 1775
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 134/290 (46%), Gaps = 51/290 (17%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPV 77
L G+LT DI RVIA L+ T V+ VMT P V V+AL M + HLPV
Sbjct: 2416 LIGLLTANDILMRVIASNLDPSTTLVADVMTSTPDTVPPSMSLVDALHLMHEHHTLHLPV 2475
Query: 78 VENGE--VIALLDIAKCLYDAIARMERAAEKGKAIAAA-VEGVE--KHWGTSI------- 125
VE+G ++ L+D+ Y A +G A++ +G + W S+
Sbjct: 2476 VEDGSGIILGLIDVLSLCYGTFA-------QGAAVSQGNFDGGDWRAFWDVSLALTGDTE 2528
Query: 126 ---------SGPNTFIETLRERM-------------------FRPSLSTIIPEKSKVVTI 157
S +ET R++ FRP +S + P V+ I
Sbjct: 2529 SEVSMSVVDSKYARSVETRRQKTSSLYSFDGKGSAVGPSEGAFRP-VSMLRPRS--VLHI 2585
Query: 158 SPTDTVLMATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVISQNLPADSTLVEKVMT 216
D+V A ++M R+ + VVT ++ RGILT DI RV+ ++L D+ V VMT
Sbjct: 2586 DENDSVTEAARQMRHGRVDAVVVTTDDGDLRGILTDTDITRRVLGKHLDPDTCCVATVMT 2645
Query: 217 PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
NP C D ++A+ M +G+F HLPVV ++G + ++D+ + A+
Sbjct: 2646 VNPCCVQADESAIEAITKMLEGRFKHLPVVGKNGSISGILDISKCLYDAI 2695
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 23/228 (10%)
Query: 40 ETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIAR 99
ET VS V++ P S + EA++ P V NG ++ A L +
Sbjct: 1076 ETNVSPVVSTPPVLRASSSAPEEAVR----------PRVANGASRPKMEAAPALGASRVF 1125
Query: 100 MERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISP 159
+A E K+++ G+ G + NT T RPS K +T+S
Sbjct: 1126 ASKAKEP-KSLSMVSSGISN--GKAHGQHNTHNSTRSVAHLRPS---------KALTVSE 1173
Query: 160 TDTVLMATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVISQNLPADSTLVEKVMTPN 218
+ TV A + M R S+ +V ++ GI T D RV+ + L +TL+ VMTP
Sbjct: 1174 SLTVFQAAELMQRNRTSAVLVVCDDSALSGIFTDTDTAQRVLGRGLDPSATLIGAVMTPK 1233
Query: 219 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
P+ T++ +DAL +M G F HLPVV ++G VV +++V + A+
Sbjct: 1234 PKFVTLEDSAMDALDMMVTGVFRHLPVVSKEGQVVGILNVARCLYDAI 1281
>gi|239925803|gb|ACS35536.1| myosin 29 [Phaeodactylum tricornutum]
Length = 2303
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 163/280 (58%), Gaps = 15/280 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
++++R A L+ ++ L GI+TD DI RV+A+ ++ T VS+VMT NPT V A
Sbjct: 1818 LSSKRGAASLVVSTDGSLAGIMTDTDITRRVVAKHIDTSATSVSEVMTPNPTCVAMSDSA 1877
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
++AL MV+ FRHLPVV++ G V+ LLDIAKCL DAI+++ER +EK + AA + V++
Sbjct: 1878 MDALTTMVENHFRHLPVVDDQGSVVGLLDIAKCLNDAISKLERTSEKTNS--AAEDAVKQ 1935
Query: 120 ------HWGTSISGPNTFIETLRERMFR----PSLSTIIPEKSKVVTISPTDTVLMATKK 169
G + + L + F P+L +++ K + + P+ ++ +
Sbjct: 1936 MVAQQGAGGAQAAALKALLGNLMSQAFGGKQMPTLRSLLAGKPGTL-VDPSTSIRNCGLR 1994
Query: 170 MLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIV 229
M + R +A+V + + G+ T KD++ R +++ L D T V +VMTP+PE + D ++
Sbjct: 1995 MADSR-KAALVVDDGELVGVFTFKDMMSRAVAKELDLDVTPVSQVMTPSPEFVSPDMTVL 2053
Query: 230 DALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
+AL MHD KFL LPV + DG VV +VDV+ + H E
Sbjct: 2054 EALQSMHDNKFLTLPVCESDGRVVGLVDVMDVIHGCGGAE 2093
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 155/279 (55%), Gaps = 12/279 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A +R +A ++ S+ L GILTD DI RV+A+ ++ + V +VMT PT V + A
Sbjct: 1466 LAMKRANATVVVSSDGSLSGILTDTDITRRVVAKFVDTALSTVDEVMTPFPTCVAMEDSA 1525
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERA-AEKGKAIAAAVEGVE 118
++AL M++ FRHLPVV++ G V+ LLDIAKCL DAI ++E+ + +A AV+ +
Sbjct: 1526 MDALTIMLENHFRHLPVVDDRGIVVGLLDIAKCLDDAIGKLEKTNKQSSRAGEDAVKNIL 1585
Query: 119 KHWGTSISGPNTFIETLRERMFR--------PSLSTIIPEKSKVVTISPTDTVLMATKKM 170
+ SI ++ L + P+L ++ K + + P+ ++ A M
Sbjct: 1586 VNKSGSIDSQAVALQALLGNLMAKAFGDKTVPTLRALLGGKPGTI-VHPSASIREAGILM 1644
Query: 171 LELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVD 230
E R +A+V + G+ T KD+L R +++ L D+T V VMTP PE + D ++
Sbjct: 1645 AETR-KAALVVDNDVLVGVFTFKDMLSRAVAKGLDLDATSVADVMTPEPESVSPDMNALE 1703
Query: 231 ALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
AL MHD +FL LPV + DG +V +V+V+ + + E
Sbjct: 1704 ALQTMHDNRFLTLPVCESDGTIVGLVEVLDVIYGCGGPE 1742
>gi|260943069|ref|XP_002615833.1| hypothetical protein CLUG_04715 [Clavispora lusitaniae ATCC 42720]
gi|238851123|gb|EEQ40587.1| hypothetical protein CLUG_04715 [Clavispora lusitaniae ATCC 42720]
Length = 627
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 160/281 (56%), Gaps = 10/281 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ARR + +L+ + + L GI T KD+A RV+ LN T + ++MT +P +D+ A
Sbjct: 119 MSARRENCILVVNDDGELIGIFTAKDLAFRVVGSGLNANATLIEQIMTPSPICANADSPA 178
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
EAL MV+ FRHLPV+++ ++ +LDI K + ++ER K + A++ V
Sbjct: 179 SEALTLMVEKGFRHLPVLDDKSRIVGVLDITKSYAQQMEKLERLHASSKNLYEALDSVHN 238
Query: 120 HWGTSISGPNTF--IETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSS 177
G + + F E L+ +M P+LS+++ + + + +VL AT +M E R ++
Sbjct: 239 EMGVADQPRHIFEYFEDLKSKMDGPTLSSVLDSATTPIYTNVKCSVLEATIQMKENRTTA 298
Query: 178 AVVT-VENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+V + GI TSKD+++RVI+ L + V +VMTP P+ A T I AL M
Sbjct: 299 VLVNDTSGELTGIFTSKDVVLRVIAAGLNPKTCSVVRVMTPQPDVANERTSIQQALRQMF 358
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILLDQIMR 277
+G +L+LPVVD +GD++ +VDV+ +T+A L+QI R
Sbjct: 359 EGHYLNLPVVDNEGDIIGIVDVLKLTYAT------LNQIKR 393
>gi|298714699|emb|CBJ27624.1| myosin 29 [Ectocarpus siliculosus]
Length = 3170
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 108/285 (37%), Positives = 160/285 (56%), Gaps = 24/285 (8%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA R DA +L + G+LTD DIA +V+ R L+ TPVS VMT +P +V + A
Sbjct: 2280 MAEIRTDAAILLGQMGDMKGVLTDHDIARKVVGRSLDPSRTPVSSVMTPDPIWVTTTDNA 2339
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKG------------ 107
++AL+ M++ RHLPVV E G V +L+IAKCLYDAI R+E+ A +
Sbjct: 2340 MDALETMLETHSRHLPVVSEEGAVSGMLNIAKCLYDAIRRLEKRALRAEEEGGGGLSGEK 2399
Query: 108 KAIAAAVEGVEKHWGTSISGPNTF------IETLRERMFRPSLSTIIPEKSKVVTISPTD 161
+ +AA++ + +G NT ++ L + P+L I+ E++ D
Sbjct: 2400 QELAASLIKMHSMKAGKKNGKNTLAAMTMLLQGLSDGEEDPTLEDILSEQTGEFA-EEGD 2458
Query: 162 TVLMATKKMLELRLSSAVVTVEN-KPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPE 220
+V K + R AV+ + N + GI+T KD+LMRV+++ L D+T V VMTPNP+
Sbjct: 2459 SVAACGKAIS--RSKKAVLVLRNGRLAGIVTPKDLLMRVVAKGLDPDATPVSAVMTPNPD 2516
Query: 221 CATIDTPIVDALHIMHDGKFLHLPVVDRD-GDVVDVVDVIHITHA 264
+++AL MH+ K+LHLPVVD D G+V+ VV V+ I HA
Sbjct: 2517 AVPPAMTVIEALREMHENKYLHLPVVDEDSGNVLGVVSVMEIIHA 2561
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/287 (37%), Positives = 156/287 (54%), Gaps = 20/287 (6%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA R DA LLT + + GI+T D RV+A ++ T S+VMT NPT VLS+ A
Sbjct: 1518 MANARNDAALLTGAGGGMTGIITAIDCIRRVVAVSVDPNSTAASEVMTPNPTTVLSEDSA 1577
Query: 61 VEALQKMVQGKFRHLPV-VENGEVIALLDIAKCLYDAIARMERAAEK-----GKAIAAAV 114
+EAL M+ FRHLPV G+V +LDIAKCLYDA++R++R A++ G+A A +
Sbjct: 1578 MEALSIMLGRHFRHLPVRTPRGDVTGILDIAKCLYDAVSRLQRTAKRKSVDSGEADEAEM 1637
Query: 115 EGVEKHWGTSISGPNTFIETLRERMFRP----------SLSTIIPEKSKVVTISPTDTVL 164
+ + ++ L +MF SL+ ++ K + + D+
Sbjct: 1638 SMLAELGKGKGKKSKAAMQALLAKMFADDPEGGTGVSLSLAELLKLKGEPQLVFADDSAR 1697
Query: 165 MATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVISQNLPADSTLVEKVMTPNPECAT 223
A K + R AV+ V+N GI T KD+L RV+S+ + D VE VMTPNP+ +
Sbjct: 1698 GAGKAIARGR--KAVLVVDNGGLAGIFTEKDMLNRVLSKGINPDEVSVEDVMTPNPDTVS 1755
Query: 224 IDTPIVDALHIMHDGKFLHLPVVDRD-GDVVDVVDVIHITHAAVATE 269
+++AL MH+ K+LHLPVVD D G+V+ VV V+ I A E
Sbjct: 1756 STMTVLEALQEMHENKYLHLPVVDEDSGNVLGVVSVMEIIQATAGEE 1802
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/299 (37%), Positives = 161/299 (53%), Gaps = 34/299 (11%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ +R DA LLT + GI+TD D+ RVIA ++ + TPV +MT P V D A
Sbjct: 2645 MSLKRTDAALLT-KRGRVVGIVTDHDLTRRVIALDMPPDRTPVRDIMTAEPAMVSMDESA 2703
Query: 61 VEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+EAL M+Q K RHLPV++ G++ LLDIAKCLYDA++R+E AA+K KA+ E
Sbjct: 2704 MEALGLMIQNKTRHLPVMDAQGKIGGLLDIAKCLYDAVSRLEHAAKK-KALEEGDGDGEV 2762
Query: 120 HWGTSI---------------SGPN-------------TFIETLRERMFRPSLSTIIPEK 151
G+++ + P T ET RE + +L+ ++ K
Sbjct: 2763 GSGSTVMIGAVMEAAKAMKGKASPKNQQALQELMMLAMTGSETEREGTNQ-TLADVLASK 2821
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
K + P TV A ++ + + +V E + GI T KD++ RVI++ L +T V
Sbjct: 2822 DKPEFVRPRHTVREAA-SVIASQKKAVLVVEEGELAGIFTPKDMMNRVITKKLNPGTTAV 2880
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD-RDGDVVDVVDVIHITHAAVATE 269
VMTPNP+ A +V+AL M + ++LHLPVVD R G V+ VVDV+ I A V E
Sbjct: 2881 FSVMTPNPDGADPSMTVVEALQQMCENRYLHLPVVDERSGAVLGVVDVMEIVQATVGQE 2939
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/270 (35%), Positives = 143/270 (52%), Gaps = 23/270 (8%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA R DA +L D+ L GI++D+D+A RV+A L+ T VS+VMT +PT V A
Sbjct: 1901 MADVRTDAAILLDNKGHLEGIISDQDVARRVVANRLDPSSTTVSEVMTPHPTIVHMADSA 1960
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGK----------- 108
+E L M++ +FRHLPV++ G V LL IAKCLYDAI R+++ A + +
Sbjct: 1961 MECLGIMIEKRFRHLPVIDGEGNVTGLLSIAKCLYDAIQRLKKKAARAENSGGGGGGGNA 2020
Query: 109 ---------AIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISP 159
A A +G K + + E SL I+ E++ +
Sbjct: 2021 NLAASVLQMANAGKGKGKNKTRDLQAALAMLLANSSDEAEANHSLREILSEQTTSF-VDG 2079
Query: 160 TDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 219
D++ A + + R + +V + + GILT KD+LMRV+++ L D T V +MTPNP
Sbjct: 2080 RDSITAAAAAIAKGR-KAVLVLDQGRLAGILTPKDVLMRVVAKELDPDRTPVSSIMTPNP 2138
Query: 220 ECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
+ + V+AL MH+ K+LHLPVVD D
Sbjct: 2139 DTVPPEMTAVEALGEMHENKYLHLPVVDLD 2168
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 135/270 (50%), Gaps = 23/270 (8%)
Query: 15 NALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRH 74
N L GI+T KD+ RV+A+ L+ + TPVS VMT NP V +EAL++M + K+ H
Sbjct: 2479 NGRLAGIVTPKDLLMRVVAKGLDPDATPVSAVMTPNPDAVPPAMTVIEALREMHENKYLH 2538
Query: 75 LPVVE--NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFI 132
LPVV+ +G V+ ++ + + ++ A +KG A G +S +
Sbjct: 2539 LPVVDEDSGNVLGVVSVMEIIHAT------AGDKGSDRWEAFFGDAMDAADDVSDSASMF 2592
Query: 133 ---ETLRERMFRPSLSTIIP----EKSKVVTISPTDTVLMAT-KKMLEL-------RLSS 177
E + R +P T P KV + P V+M++ +LE+ R +
Sbjct: 2593 SAEEKMSMRSAKPGAKTGAPAPPRSNKKVSCLKPKRPVIMSSDGSVLEVATEMSLKRTDA 2652
Query: 178 AVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHD 237
A++T + GI+T D+ RVI+ ++P D T V +MT P ++D ++AL +M
Sbjct: 2653 ALLTKRGRVVGIVTDHDLTRRVIALDMPPDRTPVRDIMTAEPAMVSMDESAMEALGLMIQ 2712
Query: 238 GKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
K HLPV+D G + ++D+ + AV+
Sbjct: 2713 NKTRHLPVMDAQGKIGGLLDIAKCLYDAVS 2742
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 150/298 (50%), Gaps = 37/298 (12%)
Query: 3 ARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVE 62
AR A+L+ D N L GI T+KD+ RV+++ +N +E V VMT NP V S +E
Sbjct: 1704 ARGRKAVLVVD-NGGLAGIFTEKDMLNRVLSKGINPDEVSVEDVMTPNPDTVSSTMTVLE 1762
Query: 63 ALQKMVQGKFRHLPVVE--NGEVIALLDIAKCLYDAIARMERA----AEKGKAIAAAVEG 116
ALQ+M + K+ HLPVV+ +G V+ ++ + + + A A E + A G + A +G
Sbjct: 1763 ALQEMHENKYLHLPVVDEDSGNVLGVVSVMEII-QATAGEEGSTGWQALFGSGLDATGDG 1821
Query: 117 VEKHWGTSISGPNTFIETLRERMFR----------PSLSTII-----PEKSKVVTIS--- 158
+ G + R + R PS ++ + P+K+ +S
Sbjct: 1822 FSDTSSQASMGSIGTRASARVGVGRGKTSPRVAMTPSAASSVRGKEPPKKTDSRPVSMLK 1881
Query: 159 --------PTDTVLMATKKMLELRLSSAVVTVENKP--RGILTSKDILMRVISQNLPADS 208
T +VL KKM ++R +A++ ++NK GI++ +D+ RV++ L S
Sbjct: 1882 PKPPLCLPSTVSVLEVAKKMADVRTDAAIL-LDNKGHLEGIISDQDVARRVVANRLDPSS 1940
Query: 209 TLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
T V +VMTP+P + ++ L IM + +F HLPV+D +G+V ++ + + A+
Sbjct: 1941 TTVSEVMTPHPTIVHMADSAMECLGIMIEKRFRHLPVIDGEGNVTGLLSIAKCLYDAI 1998
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 138/293 (47%), Gaps = 45/293 (15%)
Query: 8 ALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKM 67
A+L+ D L GILT KD+ RV+A+EL+ + TPVS +MT NP V + AVEAL +M
Sbjct: 2096 AVLVLD-QGRLAGILTPKDVLMRVVAKELDPDRTPVSSIMTPNPDTVPPEMTAVEALGEM 2154
Query: 68 VQGKFRHLPVVENGEVIALLDIAKCLYDAIARME----RAAEKGKAIAAAVEGVEKHWGT 123
+ K+ HLPVV+ LD+ + + ME A +KG + A+ G G
Sbjct: 2155 HENKYLHLPVVD-------LDVGTVVG-VVNVMEILRATAGDKGSSSWEALFGSAMDAGD 2206
Query: 124 SIS-------------------GPN----------TFIETLRERMFRPSLSTIIPEKSKV 154
+S GP E+++ +S++ P+
Sbjct: 2207 DVSDSASMYSMDRSVMSARQRGGPGLPRAAAAGSVAAAESVKHEDHHRPVSSLKPKPPLC 2266
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVE-NKPRGILTSKDILMRVISQNLPADSTLVEK 213
+++ T V K+M E+R +A++ + +G+LT DI +V+ ++L T V
Sbjct: 2267 LSVDLT--VAQVAKRMAEIRTDAAILLGQMGDMKGVLTDHDIARKVVGRSLDPSRTPVSS 2324
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
VMTP+P T +DAL M + HLPVV +G V ++++ + A+
Sbjct: 2325 VMTPDPIWVTTTDNAMDALETMLETHSRHLPVVSEEGAVSGMLNIAKCLYDAI 2377
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 14/122 (11%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPV 77
L GI T KD+ RVI ++LN T V VMT NP VEALQ+M + ++ HLPV
Sbjct: 2855 LAGIFTPKDMMNRVITKKLNPGTTAVFSVMTPNPDGADPSMTVVEALQQMCENRYLHLPV 2914
Query: 78 VE--NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETL 135
V+ +G V+ ++D+ + + + ++G + G E +G+++ + +T+
Sbjct: 2915 VDERSGAVLGVVDVMEIVQATV------GQEGSS------GWEAFFGSAMDAADDMSDTM 2962
Query: 136 RE 137
E
Sbjct: 2963 SE 2964
>gi|219122133|ref|XP_002181407.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407393|gb|EEC47330.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 443
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 163/280 (58%), Gaps = 15/280 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
++++R A L+ ++ L GI+TD DI RV+A+ ++ T VS+VMT NPT V A
Sbjct: 31 LSSKRGAASLVVSTDGSLAGIMTDTDITRRVVAKHIDTSATSVSEVMTPNPTCVAMSDSA 90
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
++AL MV+ FRHLPVV++ G V+ LLDIAKCL DAI+++ER +EK + AA + V++
Sbjct: 91 MDALTTMVENHFRHLPVVDDQGSVVGLLDIAKCLNDAISKLERTSEKTNS--AAEDAVKQ 148
Query: 120 ------HWGTSISGPNTFIETLRERMFR----PSLSTIIPEKSKVVTISPTDTVLMATKK 169
G + + L + F P+L +++ K + + P+ ++ +
Sbjct: 149 MVAQQGAGGAQAAALKALLGNLMSQAFGGKQMPTLRSLLAGKPGTL-VDPSTSIRNCGLR 207
Query: 170 MLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIV 229
M + R +A+V + + G+ T KD++ R +++ L D T V +VMTP+PE + D ++
Sbjct: 208 MADSR-KAALVVDDGELVGVFTFKDMMSRAVAKELDLDVTPVSQVMTPSPEFVSPDMTVL 266
Query: 230 DALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
+AL MHD KFL LPV + DG VV +VDV+ + H E
Sbjct: 267 EALQSMHDNKFLTLPVCESDGRVVGLVDVMDVIHGCGGAE 306
>gi|422293264|gb|EKU20564.1| myosin-like protein, partial [Nannochloropsis gaditana CCMP526]
Length = 349
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 154/290 (53%), Gaps = 29/290 (10%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RR A+LLT + L GILTD D+ RV+++EL++E T VMT NPT V +
Sbjct: 27 MVERRAAAVLLTGKDGTLSGILTDTDVTRRVVSKELSVEGTTAEDVMTANPTTVTLEDDC 86
Query: 61 VEALQKMVQGKFRHLPVVENGE-VIALLDIAKCLYDAIARMERAAEK-----GKAIAAAV 114
++AL MV+G FRHLPV+++G+ V+ LDIAKCL DAI R+E+ E G +
Sbjct: 87 LDALTLMVRGSFRHLPVLDSGDAVVGCLDIAKCLNDAITRLEKMEEHREKQLGNGTNKQL 146
Query: 115 E------------GVEKHWGTSISGPNTFIETLRERMFR--------PSLSTIIPEKSKV 154
E G KH +S T ++ L PS+ +++ S
Sbjct: 147 EAAAMAMALAGRGGGGKHQTALVS---TLMQLLSSSGGNGEDGGSKLPSVGSMLSGASST 203
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKV 214
+S +VL A+++M R + VV + G++T KD+L RV+++ L ++ +V
Sbjct: 204 ALLSKEASVLEASREMAASRKACLVVGENGELIGLVTFKDVLGRVVAKGLSPGGAILGEV 263
Query: 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
MTP P T D ++DAL+ M DG FL+LPVV+ G + ++ + I +
Sbjct: 264 MTPKPGSVTPDMSLLDALYTMRDGHFLNLPVVEESGRALGLLSAMEIVQS 313
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 170 MLELRLSSAVVTVENKP-RGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPI 228
M+E R ++ ++T ++ GILT D+ RV+S+ L + T E VMT NP T++
Sbjct: 27 MVERRAAAVLLTGKDGTLSGILTDTDVTRRVVSKELSVEGTTAEDVMTANPTTVTLEDDC 86
Query: 229 VDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
+DAL +M G F HLPV+D VV +D+ + A+
Sbjct: 87 LDALTLMVRGSFRHLPVLDSGDAVVGCLDIAKCLNDAI 124
>gi|422295638|gb|EKU22937.1| myosin-like protein, partial [Nannochloropsis gaditana CCMP526]
Length = 349
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 154/290 (53%), Gaps = 29/290 (10%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RR A+LLT + L GILTD D+ RV+++EL++E T VMT NPT V +
Sbjct: 27 MVERRAAAVLLTGKDGTLSGILTDTDVTRRVVSKELSVEGTTAEDVMTANPTTVTLEDDC 86
Query: 61 VEALQKMVQGKFRHLPVVENGE-VIALLDIAKCLYDAIARMERAAEK-----GKAIAAAV 114
++AL MV+G FRHLPV+++G+ V+ LDIAKCL DAI R+E+ E G +
Sbjct: 87 LDALTLMVRGSFRHLPVLDSGDAVVGCLDIAKCLNDAIIRLEKMEEHREKQLGNGTNKQL 146
Query: 115 E------------GVEKHWGTSISGPNTFIETLRERMFR--------PSLSTIIPEKSKV 154
E G KH +S T ++ L PS+ +++ S
Sbjct: 147 EAAAMAMALAGRGGGGKHQTALVS---TLMQLLSSSGGNGEDGGSKLPSVGSMLSGASST 203
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKV 214
+S +VL A+++M R + VV + G++T KD+L RV+++ L ++ +V
Sbjct: 204 ALLSKEASVLEASREMAASRKACLVVGENGELIGLVTFKDVLGRVVAKGLSPGGAILGEV 263
Query: 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
MTP P T D ++DAL+ M DG FL+LPVV+ G + ++ + I +
Sbjct: 264 MTPKPGSVTPDMSLLDALYTMRDGHFLNLPVVEESGRALGLLSAMEIVQS 313
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 170 MLELRLSSAVVTVENKP-RGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPI 228
M+E R ++ ++T ++ GILT D+ RV+S+ L + T E VMT NP T++
Sbjct: 27 MVERRAAAVLLTGKDGTLSGILTDTDVTRRVVSKELSVEGTTAEDVMTANPTTVTLEDDC 86
Query: 229 VDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
+DAL +M G F HLPV+D VV +D+ + A+
Sbjct: 87 LDALTLMVRGSFRHLPVLDSGDAVVGCLDIAKCLNDAI 124
>gi|110740370|dbj|BAF02080.1| hypothetical protein [Arabidopsis thaliana]
Length = 295
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/100 (76%), Positives = 88/100 (88%)
Query: 169 KMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPI 228
KM+E + S+A+V VENK GILTSKDILMRVISQNLP ++T VEKVMTPNPE AT+D I
Sbjct: 2 KMVEYQSSAAMVMVENKLVGILTSKDILMRVISQNLPQETTTVEKVMTPNPESATVDMAI 61
Query: 229 VDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268
V+ALHIMH+GKFLHLPV+D+DGDVV V+DVIHITHAAV T
Sbjct: 62 VEALHIMHNGKFLHLPVLDKDGDVVAVIDVIHITHAAVTT 101
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPV 77
L GILT KDI RVI++ L E T V KVMT NP D VEAL M GKF HLPV
Sbjct: 19 LVGILTSKDILMRVISQNLPQETTTVEKVMTPNPESATVDMAIVEALHIMHNGKFLHLPV 78
Query: 78 VE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSIS-GPN 129
++ +G+V+A++D+ + A+ A A ++ ++K W ++++ PN
Sbjct: 79 LDKDGDVVAVIDVIHITHAAVTTAGSTAGINNETANSM--MQKFWDSAMALSPN 130
>gi|354548364|emb|CCE45100.1| hypothetical protein CPAR2_701040 [Candida parapsilosis]
Length = 619
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/270 (34%), Positives = 153/270 (56%), Gaps = 4/270 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M A R + +L+ + L GI T KD+A R++ L + ++MT +P ++ A
Sbjct: 91 MTATRENCVLVVNDIGELLGIFTAKDLAFRIVGSGLTANSVTIDQIMTADPICANANNPA 150
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
EAL MV+ FRHLPV++N +++ +LDI KC + ++ER + K + A V
Sbjct: 151 SEALNLMVERGFRHLPVLDNDNQIVGVLDITKCYAQQMEKLERMHAQSKTLYEAWTSVHN 210
Query: 120 HWGTSISGPNTF--IETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSS 177
G P+ F ETL+ +M P+L ++ E ++ + +S +V AT M E + ++
Sbjct: 211 EIGVQDQPPHVFQYFETLKNKMNGPTLDNVLDETTEPIYVSVKTSVYEATVLMKENKTTA 270
Query: 178 AVVTVENKP-RGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+V N+ GI TSKD+++RVI+ L + V +VMT +P+ A + PI +AL M
Sbjct: 271 VLVKDTNQEVTGIFTSKDVVLRVIAAGLDPKNCSVVRVMTSHPDVAYANLPIQEALRKMF 330
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
DG +L+LPVV+ D D++ +VDV+ +T+A +
Sbjct: 331 DGHYLNLPVVNTDEDIIGMVDVLKLTYATL 360
>gi|26450828|dbj|BAC42522.1| unknown protein [Arabidopsis thaliana]
Length = 295
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 75/100 (75%), Positives = 87/100 (87%)
Query: 169 KMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPI 228
KM+E + +A+V VENK GILTSKDILMRVISQNLP ++T VEKVMTPNPE AT+D I
Sbjct: 2 KMVEYQSGAAMVMVENKLVGILTSKDILMRVISQNLPQETTTVEKVMTPNPESATVDMAI 61
Query: 229 VDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268
V+ALHIMH+GKFLHLPV+D+DGDVV V+DVIHITHAAV T
Sbjct: 62 VEALHIMHNGKFLHLPVLDKDGDVVAVIDVIHITHAAVTT 101
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPV 77
L GILT KDI RVI++ L E T V KVMT NP D VEAL M GKF HLPV
Sbjct: 19 LVGILTSKDILMRVISQNLPQETTTVEKVMTPNPESATVDMAIVEALHIMHNGKFLHLPV 78
Query: 78 VE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSIS-GPN 129
++ +G+V+A++D+ + A+ A A ++ ++K W ++++ PN
Sbjct: 79 LDKDGDVVAVIDVIHITHAAVTTAGSTAGINNETANSM--MQKFWDSAMALSPN 130
>gi|344232849|gb|EGV64722.1| hypothetical protein CANTEDRAFT_104365 [Candida tenuis ATCC 10573]
Length = 619
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 152/271 (56%), Gaps = 6/271 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M A+R + +L+ + L GI T KD+A RV+ LN + ++MT NP ++ A
Sbjct: 96 MTAKRENCILVVGEDGELLGIFTAKDLAFRVVGSNLNANVITIDQIMTPNPLCTNANDPA 155
Query: 61 VEALQKMVQGKFRHLPVVENGE-VIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL M+Q +FRHLPV++N + ++ +LDI KC + ++ER E K + A + V
Sbjct: 156 SDALTVMIQKRFRHLPVLDNRDRIVGVLDITKCYSQQMEKLERMHESSKRLYEAFDTVHS 215
Query: 120 HWGTSISGP---NTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
+ P + E L+ +M P+L T++ ++ + S TV AT M E +
Sbjct: 216 EMAV-VQQPLQVFQYFEELKSKMNGPTLDTVLDSRTVPIYCSIKTTVYEATVLMKENNTT 274
Query: 177 SAVVT-VENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIM 235
+ +V E+K GI TSKD+++RVI+ L + + +VMTP P+ A D I ++L M
Sbjct: 275 AVLVKDNEDKVNGIFTSKDVVLRVIAAGLTPKNCSIVRVMTPQPDVARHDLSIQESLRKM 334
Query: 236 HDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
DG +L+LPVV GD++ +V+V+ +T+A +
Sbjct: 335 FDGHYLNLPVVGDSGDIIGIVEVLKLTYATL 365
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 128/298 (42%), Gaps = 51/298 (17%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M A+L+ D+ + GI T KD+ RVIA L + + +VMT P D
Sbjct: 268 MKENNTTAVLVKDNEDKVNGIFTSKDVVLRVIAAGLTPKNCSIVRVMTPQPDVARHDLSI 327
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEK------GKAIAAA 113
E+L+KM G + +LPVV ++G++I ++++ K Y + ++++ ++ +A +
Sbjct: 328 QESLRKMFDGHYLNLPVVGDSGDIIGIVEVLKLTYATLNQIKQVKDQESPEIVSEAKSGG 387
Query: 114 VEG--VEKHWGTSISGPNTFIET---LRERMFRPSLSTIIPEKSKVVT------ISPTDT 162
EG K W TS+ + + + + RP T + ++ + + I P+D+
Sbjct: 388 AEGPAWNKFW-TSLDNDADSVNSDSLVVDSSGRPQTPTNLTSQAGLTSSDLNLDIKPSDS 446
Query: 163 VLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKV-MTPNPEC 221
+ S + T + +L S D V+ PA+ V ++ + P
Sbjct: 447 I-------------SHIETPQKSRTSLLDSLDESF-VLKFKSPANENRVHRISIKPTDGL 492
Query: 222 ATIDTPIVDALH-----------IMHDGKFLHLPVVDRDGDVV------DVVDVIHIT 262
+ I + LH + DGK + VD +GD+V D++D + I
Sbjct: 493 TKLRELIDEKLHPKDFQYLRVTKVNDDGKTYAISYVDDEGDIVSITSDNDLLDCVKIN 550
>gi|294659574|ref|XP_461972.2| CBS/PB1 domain-containing protein [Debaryomyces hansenii CBS767]
gi|199434069|emb|CAG90442.2| DEHA2G09790p [Debaryomyces hansenii CBS767]
Length = 607
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 157/285 (55%), Gaps = 10/285 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+A+R + +L+ + L GI T KD+A R++ L+ + ++MT NP S+T A
Sbjct: 89 MSAKRENCILVVNDIGELLGIFTAKDLAFRIVGAGLSATSVTIDQIMTPNPMCANSNTPA 148
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
EAL MV FRHLPV+ EN +++ +LDI KC + ++ER K + A++ V
Sbjct: 149 SEALNLMVHKGFRHLPVLDENNQIVGVLDITKCYAQQMEKLERMHSSSKKLYEALDNVHS 208
Query: 120 HWGTSISGPNTF--IETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSS 177
G + F E L+ +M P+L +++ + V + TV AT M E + ++
Sbjct: 209 EMGMMQQPLHVFQYFENLKNKMNGPTLESVLDATTTPVYTTVKTTVYDATVLMKENKTTA 268
Query: 178 AVVTVENKP-RGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
++ N+ GI TSKD+++RVI+ L + +VMTP P+ A D I +AL M
Sbjct: 269 VLIKDTNEEVAGIFTSKDVVLRVIAAGLDPKKCSIVRVMTPQPDIAKQDLSIQEALRQMF 328
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILLDQIMRQQAQ 281
+G++L+LP+V + D+V +VDV+ +T+A L+QI + ++
Sbjct: 329 EGRYLNLPIVGNENDIVGIVDVLKLTYAT------LNQIKQTESN 367
>gi|126275953|ref|XP_001386928.1| CBS/PB1 domain-containing protein [Scheffersomyces stipitis CBS
6054]
gi|126212797|gb|EAZ62905.1| CBS domain-containing protein [Scheffersomyces stipitis CBS 6054]
Length = 609
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/270 (34%), Positives = 148/270 (54%), Gaps = 4/270 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ARR + +L+ + L GI T KD+A RV+ LN + ++MT NP ++ A
Sbjct: 93 MTARRENCVLVVNDVGELLGIFTAKDLAFRVVGSSLNANSVTIDQIMTPNPQCANANAAA 152
Query: 61 VEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
EAL MV+ FRHLPV++ N +++ +LDI KC + ++ER K + A++ V
Sbjct: 153 SEALTLMVERGFRHLPVLDDNNQIVGVLDITKCYAQQMEKLERMHASSKKLYEALDSVHS 212
Query: 120 HWGTSISGPNTF--IETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSS 177
G F E L+ +M P+L +++ + V + TV AT M E R ++
Sbjct: 213 EMGVGQQPLQVFKYFENLKSKMNGPTLESVLDANTVPVYSNVKSTVYEATVLMKENRTTA 272
Query: 178 AVVTVENKP-RGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+V N GI TSKD+++RVI+ L + + +VMTP P+ A ++ PI AL M
Sbjct: 273 VLVKDNNDEVTGIFTSKDVVLRVIAAGLDPKNCSIVRVMTPQPDVAKVNLPIQQALRQMF 332
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
+G +L+LPVV D++ +V+V+ +T+A +
Sbjct: 333 EGHYLNLPVVGDQNDIIGIVEVLKLTYATL 362
>gi|448114822|ref|XP_004202675.1| Piso0_001524 [Millerozyma farinosa CBS 7064]
gi|359383543|emb|CCE79459.1| Piso0_001524 [Millerozyma farinosa CBS 7064]
Length = 598
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 149/268 (55%), Gaps = 4/268 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ +R + LL+ + L GI T KD+A R++ LN + ++MT NP S+T A
Sbjct: 89 MSTKRENCLLVVNDAGELMGIFTAKDLAFRIVGSGLNANSVTIDQIMTPNPMCANSNTPA 148
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
EAL MV KFRHLPV+++ +++ +LDI KC + R+ER K + A++ V
Sbjct: 149 SEALNLMVHKKFRHLPVLDDSNQIVGILDITKCYSQQMERLERMYLSSKKLYEALDNVHS 208
Query: 120 HWGTSISGPN--TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSS 177
G + + + E L++++ P L T++ + + + +V AT M + ++
Sbjct: 209 QIGFTEQSSHIAEYFEHLKDKISGPRLETMLDNSTAPIYATIKTSVYDATVLMKDNNTTA 268
Query: 178 AVVTVENKP-RGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+V N GI TSKD+++RVI+ L + + +VMTP P+ A I +AL M
Sbjct: 269 VLVKDTNDEVAGIFTSKDVVLRVIASGLDPKNCSIVRVMTPQPDVANCGVSIQEALRKMF 328
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
+G +L+LPV D +G++V +VDV+ +T+A
Sbjct: 329 NGHYLNLPVTDDEGEIVGIVDVLKLTYA 356
>gi|83766852|dbj|BAE56992.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 287
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/240 (38%), Positives = 140/240 (58%), Gaps = 7/240 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D +L+TD + + GI T KD+A RV+ + V+++MT+NP +DT A
Sbjct: 50 MAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGQKARDITVAEIMTKNPLCARTDTSA 109
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ EN ++ +LDI KC YDA+ ++ERA + + A+EGV+
Sbjct: 110 TDALDLMVRKGFRHLPVMDENQDISGVLDITKCFYDAMEKLERAYSSSRKLYDALEGVQT 169
Query: 120 HWGTSISGPN---TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G+ S P ++E LR +M P+L T++ + VT+S +V A M E +
Sbjct: 170 ELGS--SQPQQIIQYVEALRSKMSGPTLETVL-DGLPPVTVSVRTSVKDAAAMMKEHHTT 226
Query: 177 SAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+ +V + GI TSKDI++RVI+ L + V +VMTP+P+ A D I AL MH
Sbjct: 227 ALLVQDQGSITGIFTSKDIVLRVIAPGLDPSTCSVVRVMTPHPDFAPADMSIQAALRKMH 286
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVEN-KPRGILTSKDILMRVISQNLPADSTL 210
S+ + I P T+ A + M R +VT ++ + GI T+KD+ RV+ A
Sbjct: 32 SQALQIKPNMTIAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGQKARDIT 91
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
V ++MT NP CA DT DAL +M F HLPV+D + D+ V+D+ + A+
Sbjct: 92 VAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDITKCFYDAM 147
>gi|255728581|ref|XP_002549216.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240133532|gb|EER33088.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 618
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 152/267 (56%), Gaps = 4/267 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M A+R + +L+ D L GI T KD+A R++ LN + + ++MT++P ++ A
Sbjct: 77 MTAKRENCVLVVDEVGQLLGIFTAKDLAFRIVGSGLNANQVTIDQIMTKDPICANANNAA 136
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
EAL MV+ FRHLPV+++ ++ +LDI KC + ++++ER K + A++ V
Sbjct: 137 GEALTLMVEKGFRHLPVLDDDNHIVGVLDITKCYAEQMSKLERMHSSSKKLYEALDSVHS 196
Query: 120 HWGTSISGPNTF--IETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSS 177
G S + F ETL+ +M P+L ++ ++ + + +V AT M E R ++
Sbjct: 197 EMGVSEQPQHVFQYFETLKNKMNGPTLENVLDFHTEPIYTNVKASVFEATILMKENRTTA 256
Query: 178 AVVTVENKP-RGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+V N GI TSKD+++RVI+ L + +VMTP P+ A + P+ +AL M
Sbjct: 257 VLVKDTNDEVAGIFTSKDVVLRVIAAGLDPKKCSIVRVMTPQPDVAHVSLPVPEALRKMF 316
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITH 263
DG +L+LPVV + +++ +VDV+ +T+
Sbjct: 317 DGHYLNLPVVGDEDEIIGIVDVLKLTY 343
>gi|401888948|gb|EJT52892.1| hypothetical protein A1Q1_00797 [Trichosporon asahii var. asahii
CBS 2479]
gi|406697658|gb|EKD00914.1| hypothetical protein A1Q2_04787 [Trichosporon asahii var. asahii
CBS 8904]
Length = 729
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/284 (34%), Positives = 153/284 (53%), Gaps = 37/284 (13%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV 61
AA+R D +L+ D L GI T KD+A RV A L+ T V+++MTRNP T A
Sbjct: 169 AAKRTDCVLVVDDEEGLSGIFTAKDLAFRVTADGLDPRTTTVAQIMTRNPMVTRDTTSAT 228
Query: 62 EALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHW 121
EALQ MV FRHL +DA+A++ER++ ++ A+ GV+
Sbjct: 229 EALQVMVSRHFRHL----------------VFHDALAKVERSSSATSQLSMALAGVQTEL 272
Query: 122 GTSISG-PNT-----FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRL 175
G +++ P +++ LR+RM +P L++++ T++P +V A + M E R
Sbjct: 273 GPNLTANPQAAAMMAYVDALRDRMAQPDLTSVLDTSLPPPTVTPRTSVREAARLMKERRT 332
Query: 176 SSAVVTVENK-------------PR--GILTSKDILMRVISQNLPADSTLVEKVMTPNPE 220
++ V N P+ GI TSKDI++RVI+ L + V +VMTP+P+
Sbjct: 333 TAVCVLEPNGTSVMSGVSNNGVPPKIAGIFTSKDIVLRVIAAGLDSSRCSVVRVMTPHPD 392
Query: 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
A D + DAL MH G +L+LPVV+ DG ++ +VDV+ +T+A
Sbjct: 393 TAPPDMTVQDALKKMHTGHYLNLPVVESDGRLLGIVDVLKLTYA 436
>gi|241950133|ref|XP_002417789.1| CBS/PB1 domain-containing protein [Candida dubliniensis CD36]
gi|223641127|emb|CAX45503.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 605
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 154/282 (54%), Gaps = 12/282 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ARR + +L+ + L GI T KD+A R++ LN + + +MT+NP + A
Sbjct: 73 MTARRENCVLVVNEIGELLGIFTAKDVAFRIVGSGLNATQVTIDTIMTKNPICANATDPA 132
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ E +++ +LDI K + ++ER K + A++ V
Sbjct: 133 GDALNLMVEKGFRHLPVLDEKSQIVGVLDITKSYAQQMEKLERMHSSSKKLHEALDSVHN 192
Query: 120 HWGTSISGPN---TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G + P+ + ETL+ +M P+L + + ++ +V AT M E R +
Sbjct: 193 EIGVN-EQPHHVYQYFETLKNKMNGPTLEDALDANTVPTYVNVKASVHEATMLMKENRTT 251
Query: 177 SAVVTVENKP-RGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIM 235
+ +V N+ GI TSKD+++RVI+ L V +VMTP P+ A I P+ DAL M
Sbjct: 252 AVLVKDTNEQVAGIFTSKDVVLRVIAAGLDPKKCSVVRVMTPQPDVAPIGLPVQDALRKM 311
Query: 236 HDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILLDQIMR 277
DG +L+LPVV +GD++ VV+V+ +TH I L+QI +
Sbjct: 312 FDGHYLNLPVVANEGDIIGVVEVLKLTH------ITLNQIKQ 347
>gi|448112259|ref|XP_004202051.1| Piso0_001524 [Millerozyma farinosa CBS 7064]
gi|359465040|emb|CCE88745.1| Piso0_001524 [Millerozyma farinosa CBS 7064]
Length = 598
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 149/268 (55%), Gaps = 4/268 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ +R + LL+ + L GI T KD+A R++ LN + ++MT NP S+T A
Sbjct: 89 MSTKRENCLLVVNDAGELMGIFTAKDLAFRIVGSGLNANSVTIDQIMTPNPMCANSNTPA 148
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
EAL MV KFRHLPV+++ +++ +LDI KC + R+ER K + A++ V
Sbjct: 149 SEALNLMVHKKFRHLPVLDDSNQIVGILDITKCYSQQMERLERMYLSSKKLYEALDNVHS 208
Query: 120 HWGTSISGPN--TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSS 177
G + + + E L++++ P L T++ + + + +V AT M + ++
Sbjct: 209 QIGYTEQSSHIAEYFEHLKDKISGPRLETMLDNSTAPIYATIKTSVYDATVLMKDNNTTA 268
Query: 178 AVVTVENKP-RGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+V N GI TSKD+++RVI+ L + + +VMTP P+ A I +AL M
Sbjct: 269 VLVKDTNDEVAGIFTSKDVVLRVIASGLDPKNCSIVRVMTPQPDVANYSVSIQEALRKMF 328
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHA 264
+G +L+LPV + +G++V +VDV+ +T+A
Sbjct: 329 NGHYLNLPVTNDEGEIVGIVDVLKLTYA 356
>gi|357464825|ref|XP_003602694.1| Octicosapeptide/Phox/Bem1p domain-containing protein [Medicago
truncatula]
gi|355491742|gb|AES72945.1| Octicosapeptide/Phox/Bem1p domain-containing protein [Medicago
truncatula]
Length = 293
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/98 (71%), Positives = 87/98 (88%)
Query: 170 MLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIV 229
M ELR+SS+V+ ENK +GILTSKDILMRV++ NL +STLVEKVMTPNP+CAT++T I+
Sbjct: 1 MQELRVSSSVIVTENKIQGILTSKDILMRVMAPNLSPESTLVEKVMTPNPQCATLETTII 60
Query: 230 DALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
DALH+MHDGKFLHLPVVD+DG+VV VDV+ ITHAA++
Sbjct: 61 DALHMMHDGKFLHLPVVDKDGNVVACVDVLQITHAAIS 98
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 72/127 (56%), Gaps = 3/127 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RV + ++ N + GILT KDI RV+A L+ E T V KVMT NP +T
Sbjct: 1 MQELRVSSSVIVTENKIQ-GILTSKDILMRVMAPNLSPESTLVEKVMTPNPQCATLETTI 59
Query: 61 VEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
++AL M GKF HLPVV+ +G V+A +D+ + + AI+ +E ++ G A ++K
Sbjct: 60 IDALHMMHDGKFLHLPVVDKDGNVVACVDVLQITHAAISLVE-SSSSGNVNDVASTIMQK 118
Query: 120 HWGTSIS 126
W ++ +
Sbjct: 119 FWDSAFA 125
>gi|68479125|ref|XP_716368.1| hypothetical protein CaO19.12702 [Candida albicans SC5314]
gi|68479256|ref|XP_716307.1| hypothetical protein CaO19.5238 [Candida albicans SC5314]
gi|46437973|gb|EAK97311.1| hypothetical protein CaO19.5238 [Candida albicans SC5314]
gi|46438035|gb|EAK97372.1| hypothetical protein CaO19.12702 [Candida albicans SC5314]
Length = 605
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 152/281 (54%), Gaps = 10/281 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ARR + +L+ + L GI T KD+A R++ LN + + +MT+NP + A
Sbjct: 73 MTARRENCVLVVNEIGELLGIFTAKDVAFRIVGSGLNATQVTIDTIMTKNPICANAADPA 132
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ E +++ +LDI K + ++ER K + A++ V
Sbjct: 133 GDALNLMVERGFRHLPVLDEKSQIVGVLDITKSYAQQMEKLERMHSSSKKLHEALDSVHN 192
Query: 120 HWGTSISGPNTF--IETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSS 177
G + F ETL+ +M P+L + + ++ +V AT M E R ++
Sbjct: 193 EIGVGEQPHHVFQYFETLKNKMNGPTLEDALDANTVPTYVNVKASVHEATMLMKENRTTA 252
Query: 178 AVVTVENKP-RGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+V N+ GI TSKD+++RVI+ L V +VMTP P+ A I P+ DAL M
Sbjct: 253 VLVKDTNEQVAGIFTSKDVVLRVIAAGLDPKKCSVVRVMTPQPDVAPIGLPVQDALRKMF 312
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILLDQIMR 277
DG +L+LPVV +GD++ VV+V+ +TH I L+QI +
Sbjct: 313 DGHYLNLPVVANEGDIIGVVEVLKLTH------ITLNQIKQ 347
>gi|238878382|gb|EEQ42020.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 605
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 152/281 (54%), Gaps = 10/281 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ARR + +L+ + L GI T KD+A R++ LN + + +MT+NP + A
Sbjct: 73 MTARRENCVLVVNEIGELLGIFTAKDVAFRIVGSGLNATQVTIDTIMTKNPICANAADPA 132
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV+ FRHLPV+ E +++ +LDI K + ++ER K + A++ V
Sbjct: 133 GDALNLMVERGFRHLPVLDEKSQIVGVLDITKSYAQQMEKLERMHSSSKKLHEALDSVHN 192
Query: 120 HWGTSISGPNTF--IETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSS 177
G + F ETL+ +M P+L + + ++ +V AT M E R ++
Sbjct: 193 EIGVGEQPHHVFQYFETLKNKMNGPTLEDALDANTVPTYVNVKASVHEATMLMKENRTTA 252
Query: 178 AVVTVENKP-RGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+V N+ GI TSKD+++RVI+ L V +VMTP P+ A I P+ DAL M
Sbjct: 253 VLVKDTNEQVAGIFTSKDVVLRVIAAGLDPKKCSVVRVMTPQPDVAPIGLPVQDALRKMF 312
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILLDQIMR 277
DG +L+LPVV +GD++ VV+V+ +TH I L+QI +
Sbjct: 313 DGHYLNLPVVANEGDIIGVVEVLKLTH------ITLNQIKQ 347
>gi|406602467|emb|CCH46008.1| Inosine-5'-monophosphate dehydrogenase [Wickerhamomyces ciferrii]
Length = 641
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 153/271 (56%), Gaps = 6/271 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+A+R + +L+ D + L GI T KD+A RV+++ L + ++MT NP S+T A
Sbjct: 109 MSAKRENCILVIDDDERLLGIFTAKDLAFRVVSKGLKAGSVTIDQIMTENPLCATSNTPA 168
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
EAL MV+ FRHLPV+ EN + +LDI KC +A+ ++ER E K + A++GV+
Sbjct: 169 SEALNLMVERGFRHLPVLDENNFIYGVLDITKCYQEAMEKLERMYESSKKLHDALQGVQL 228
Query: 120 HWGTSISGPNT--FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSS 177
G+ + E L+ M P+L +++ E S ++ +V A M E ++
Sbjct: 229 EIGSQQQPLQVIRYFENLKSVMNGPTLESVLDENSLPSYVNVKTSVYDAAVLMKENHTTA 288
Query: 178 AVVTVENKP--RGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIM 235
+V N GI TSKD+++RVI+ L + V +VMT P+ A + I AL M
Sbjct: 289 VLVKDSNNEDVSGIFTSKDVVLRVIAAGLDPKTVSVIRVMTSQPDVAPKNLTIQQALRKM 348
Query: 236 HDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
DG +L+LP+V+ D +++ +V+V+ +T+A +
Sbjct: 349 FDGHYLNLPIVE-DDEIIGIVEVLKLTYATL 378
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 76/133 (57%), Gaps = 4/133 (3%)
Query: 136 RERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPR--GILTSK 193
R R +P S + + S+ V P+ T A + ++ + + ++ +++ R GI T+K
Sbjct: 76 RSRHSQPG-SVLSLKPSEAVVCKPSFTAYEAAQ-LMSAKRENCILVIDDDERLLGIFTAK 133
Query: 194 DILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVV 253
D+ RV+S+ L A S ++++MT NP CAT +TP +AL++M + F HLPV+D + +
Sbjct: 134 DLAFRVVSKGLKAGSVTIDQIMTENPLCATSNTPASEALNLMVERGFRHLPVLDENNFIY 193
Query: 254 DVVDVIHITHAAV 266
V+D+ A+
Sbjct: 194 GVLDITKCYQEAM 206
>gi|448535220|ref|XP_003870934.1| hypothetical protein CORT_0G01200 [Candida orthopsilosis Co 90-125]
gi|380355290|emb|CCG24807.1| hypothetical protein CORT_0G01200 [Candida orthopsilosis]
Length = 620
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 150/270 (55%), Gaps = 4/270 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M A R + +L+ + L GI T KD+A R++ L + ++MT +P ++ A
Sbjct: 94 MTATRENCVLVVNDIGELLGIFTAKDLAFRIVGSGLTANSVTIDQIMTADPICANANNPA 153
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
EAL MV+ FRHLPV++N +++ +LDI KC + ++ER + K + A V
Sbjct: 154 SEALNLMVERGFRHLPVLDNDNQIVGVLDITKCYAQQMEKLERMHAQSKTLYDAWNSVHN 213
Query: 120 HWGTSISGPNTF--IETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSS 177
G + F ETL+ +M P+L ++ E ++ + +S +V AT M E + ++
Sbjct: 214 EIGVQDQPQHVFQYFETLKSKMNGPTLDNVLDETTEPIYVSVKTSVYEATVLMKENKTTA 273
Query: 178 AVVTVENKP-RGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+V N+ GI TSKD+++RVI+ L + V +VMT +P+ A PI AL M
Sbjct: 274 VLVKDTNQEVTGIFTSKDVVLRVIAAGLDPKNCSVVRVMTSHPDVAYASLPIQQALRKMF 333
Query: 237 DGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
DG +L+LPVV+ + D++ +VDV+ +T+A +
Sbjct: 334 DGHYLNLPVVNNEDDIIGMVDVLKLTYATL 363
>gi|224003561|ref|XP_002291452.1| hypothetical protein THAPSDRAFT_262854 [Thalassiosira pseudonana
CCMP1335]
gi|220973228|gb|EED91559.1| hypothetical protein THAPSDRAFT_262854, partial [Thalassiosira
pseudonana CCMP1335]
Length = 279
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/271 (35%), Positives = 146/271 (53%), Gaps = 20/271 (7%)
Query: 4 RRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEA 63
+R DA ++TD L GI+TD DI RV+A+ L+ T VS MT NPT V A EA
Sbjct: 11 KRGDAAIITDERGGLAGIITDTDITRRVVAKHLSPSSTCVSDAMTSNPTCVAMSDPATEA 70
Query: 64 LQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWG 122
L MV+ +FRHLPV +NG V+ +LDIAKCL DAI ++ER+ E +AA + V++
Sbjct: 71 LVTMVENRFRHLPVTDDNGAVVGVLDIAKCLNDAITKLERSKENSN--SAAEDAVKQMAS 128
Query: 123 T--------------SISGPNTFIETLRERMFRPSLSTIIPE-KSKVVTISPTDTVLMAT 167
S + + +++ + L+ + + + K IS +D ++A
Sbjct: 129 LQGAGGAQAAALQQFSFTSAHKSVKSFKSGKNSVKLADPVSKLRPKAPMISHSDDTVLAV 188
Query: 168 KKMLELRLSSAVVTVENKP--RGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATID 225
++L + A + +N GI+T D+ RV+++NL +T + VMT NP C ++
Sbjct: 189 VQLLANKRGDAAIITDNNGGMAGIITDTDVTRRVVAKNLSPSTTSISDVMTANPTCVSMS 248
Query: 226 TPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
P +AL M + +F HLPV D +G VV V+
Sbjct: 249 DPATEALVTMVENRFRHLPVTDDNGAVVGVL 279
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A +R DA ++TD+N + GI+TD D+ RV+A+ L+ T +S VMT NPT V A
Sbjct: 192 LANKRGDAAIITDNNGGMAGIITDTDVTRRVVAKNLSPSTTSISDVMTANPTCVSMSDPA 251
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALL 87
EAL MV+ +FRHLPV +NG V+ +L
Sbjct: 252 TEALVTMVENRFRHLPVTDDNGAVVGVL 279
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 163 VLMATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVISQNLPADSTLVEKVMTPNPEC 221
VL + + R +A++T E GI+T DI RV++++L ST V MT NP C
Sbjct: 1 VLSVVQLLTNKRGDAAIITDERGGLAGIITDTDITRRVVAKHLSPSSTCVSDAMTSNPTC 60
Query: 222 ATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
+ P +AL M + +F HLPV D +G VV V+D+ + A+
Sbjct: 61 VAMSDPATEALVTMVENRFRHLPVTDDNGAVVGVLDIAKCLNDAI 105
>gi|328768526|gb|EGF78572.1| hypothetical protein BATDEDRAFT_12894, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 331
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/299 (33%), Positives = 157/299 (52%), Gaps = 67/299 (22%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R DA+L+ D++ L GILTDKD+A RVIA LN + TP+ VMT+NP V DT A
Sbjct: 37 MAAKRQDAVLVVDNDGELTGILTDKDLAYRVIASRLNPKTTPIVAVMTKNPVSVGPDTTA 96
Query: 61 VEALQKMVQGKFRHLPVVENG--------------------------------EVIALLD 88
+AL KMV G FRHLPVV++G A+LD
Sbjct: 97 SDALNKMVAGHFRHLPVVDDGINDLDDQLTNLESLRSADILRSVCTDSGDFPTTTFAILD 156
Query: 89 IAKCLYDAIARMERAAEKG------------KAIAAAVEGVEKHWGTSISGPN------- 129
I KCLY+A+ ++ERA + + +++ +KH I+ P+
Sbjct: 157 ITKCLYEALEKLERAFDPHLPADIINHPNALDSFQLSIQQPDKHI---ITDPDLETTPLI 213
Query: 130 TFIETLRERMFRPSLSTIIPEKSKVVT--ISPTDTVLMATKKMLELRLSSAVVTVE---N 184
F ++ ++ P+L +++P+ + T +S +VL A KM + +AV+ E N
Sbjct: 214 QFTRNIQTQLACPTLESVLPKDAPSSTPMLSKNCSVLDAVVKMQQTH-ETAVLAFEPLPN 272
Query: 185 KP-------RGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+P GI T+KD+++RV++ L + T + +VMTP+P+C +DT ++DAL M+
Sbjct: 273 QPMVASSLLAGIFTTKDLVLRVLAAGLNPEKTAISRVMTPHPDCVGLDTTVIDALRKMY 331
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 163 VLMATKKMLELRLSSAVVTVENKPR--GILTSKDILMRVISQNLPADSTLVEKVMTPNPE 220
VL A M R AV+ V+N GILT KD+ RVI+ L +T + VMT NP
Sbjct: 30 VLQAASYMAAKR-QDAVLVVDNDGELTGILTDKDLAYRVIASRLNPKTTPIVAVMTKNPV 88
Query: 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDG 250
DT DAL+ M G F HLPVVD DG
Sbjct: 89 SVGPDTTASDALNKMVAGHFRHLPVVD-DG 117
>gi|254565947|ref|XP_002490084.1| hypothetical protein [Komagataella pastoris GS115]
gi|238029880|emb|CAY67803.1| Hypothetical protein PAS_chr1-1_0425 [Komagataella pastoris GS115]
gi|328350486|emb|CCA36886.1| Meiotically up-regulated gene 70 protein [Komagataella pastoris CBS
7435]
Length = 625
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 160/289 (55%), Gaps = 16/289 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ++ + +L+ D N L GI T KD+A R++ L T V +MT +P + T A
Sbjct: 111 MGFKKENCILVVDENDELSGIFTAKDLAFRIVGSGLRANSTTVDAIMTPSPLCCKTTTKA 170
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
EAL MV FRHLP+V++ +++ +LDI KC +A++++ER E K + A+EGV
Sbjct: 171 SEALNLMVTKGFRHLPIVDDTNQIVGILDITKCYNEAMSKLERMYESSKKLYDALEGVNS 230
Query: 120 HWGTSISGP---NTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
P + E L+ + P+LST++ + + V + TV A M + R +
Sbjct: 231 EL--QAQQPLEVIQYFENLKRMIDGPNLSTVLDDTTLPVYVDVKSTVQEAASLMRDNRTT 288
Query: 177 SAVV---TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALH 233
+ +V +N+ GI TSKD+++RVI+ +L + V +VMTP P+ AT + + +AL
Sbjct: 289 AVLVQDSNNDNEVTGIFTSKDVVLRVIAADLNPKNCSVIRVMTPKPDYATSELSVHEALR 348
Query: 234 IMHDGKFLHLPVVDR-DGDVVDVVDVIHITHAAVATEILLDQIMRQQAQ 281
M +G++L+LP++D +++ +V+V+ +TH + L QI Q Q
Sbjct: 349 KMFEGRYLNLPIIDPLSTEIIGIVEVLKLTH------VTLSQIKTMQTQ 391
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 1/117 (0%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVISQNLPADSTL 210
S+ + P TV A + M + + +V EN GI T+KD+ R++ L A+ST
Sbjct: 93 SEPIICKPNYTVHEAAQLMGFKKENCILVVDENDELSGIFTAKDLAFRIVGSGLRANSTT 152
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
V+ +MTP+P C T +AL++M F HLP+VD +V ++D+ + A++
Sbjct: 153 VDAIMTPSPLCCKTTTKASEALNLMVTKGFRHLPIVDDTNQIVGILDITKCYNEAMS 209
>gi|344302225|gb|EGW32530.1| hypothetical protein SPAPADRAFT_139714 [Spathaspora passalidarum
NRRL Y-27907]
Length = 653
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 149/272 (54%), Gaps = 5/272 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M A+R + +L+ + L GI T KD+A RV+ LN + ++MT NP ++ A
Sbjct: 92 MTAKRENCILVINEAGELMGIFTAKDLAFRVVGAGLNASSITIDQIMTPNPICAFANQPA 151
Query: 61 VEALQKMVQGKFRHLPVV--ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118
EAL MV+ FRHLPV+ E +++ +LDI KC + ++ER + A+ +
Sbjct: 152 SEALTLMVEKGFRHLPVLDEETNQILGVLDITKCYEQQMEKLERMHSSSSKLDDALNSIH 211
Query: 119 KHWGTSISGPNTF--IETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G F ETL+++M P+L +++ + V + +V AT M E R +
Sbjct: 212 SEIGIDEHPAQVFEYFETLKQKMNSPTLESVLDFTTGPVFTNVKASVYEATILMKENRTT 271
Query: 177 SAVVTVENKP-RGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIM 235
+ ++ N GI TSKD+++RVI+ L + + +VMTP+P+ A ++ P+ AL M
Sbjct: 272 AVLIKDTNDEVAGIFTSKDVVLRVIAAGLDPKTCSIVRVMTPHPDVANVNLPVQQALRQM 331
Query: 236 HDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
+G +L+LPV+ D +++ +VDV+ +T+ ++
Sbjct: 332 LEGHYLNLPVIGEDQEIIGIVDVLKLTYVTLS 363
>gi|328767299|gb|EGF77349.1| hypothetical protein BATDEDRAFT_36036 [Batrachochytrium
dendrobatidis JAM81]
Length = 712
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 159/292 (54%), Gaps = 36/292 (12%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R DA+L+ + L GILTDKDIA RV+A L++ TPVS VMTR+P V
Sbjct: 104 MAAKRTDAVLVVGEDGALAGILTDKDIAYRVVAEGLDIRTTPVSSVMTRDPIAVYDKGSR 163
Query: 61 VEALQKMVQGKFRHLPVV-ENG-----------------EVIALLDIAKCLYDAIARMER 102
EAL MV +FRHLPV+ E G V+ LLDI KC+++ I +ER
Sbjct: 164 NEALNIMVSRRFRHLPVISETGGGNDDDDNEFDEAAGGTSVVGLLDITKCVFERIDDLER 223
Query: 103 AAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIP-------EKSKVV 155
+ I +A+E +E+ GT + + +R+ P + ++ E V
Sbjct: 224 KVNEDLNIISAMEALERR-GTVAA---EHVGVVRQHHGCPDVGFVLTQTIGGQLEHGTVP 279
Query: 156 TISPTDTVLMATKKMLELRLSSAVVTVENKP-----RGILTSKDILMRVISQNLPADSTL 210
+S +V A ++++ ++AV+ + N GI T+KDI++RVI+ +L +T
Sbjct: 280 EVSIKSSVRDAA-RIMKAYHTTAVLVIGNSNDDEQIGGIFTTKDIVLRVIAASLDPMTTS 338
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHIT 262
V +VMTP+P+ T I+DAL ++ G +LHLPVVD G + +VDV+ +T
Sbjct: 339 VVRVMTPHPDYVLASTSILDALKKLNTGHYLHLPVVD-GGVPIGLVDVMTLT 389
>gi|149239558|ref|XP_001525655.1| hypothetical protein LELG_03583 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451148|gb|EDK45404.1| hypothetical protein LELG_03583 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 652
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 152/300 (50%), Gaps = 24/300 (8%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ARR + +L+ L GI T KD+A RV+ LN ++K+MT NP + + A
Sbjct: 73 MIARRENCVLVVGEEGDLMGIFTAKDLAFRVVGAGLNAGNVTINKIMTPNPICTMENNPA 132
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+AL MV FRHLPV E +V+ +LDI C + ++ER K + A++ V+
Sbjct: 133 SDALTLMVDKGFRHLPVKNELQQVVGILDITNCYAQQMEKLERMHNSSKKLYEALDSVQT 192
Query: 120 HWGTSISGPNTF--IETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSS 177
G F E LR +M P+L T++ E++ + +S TVL AT M E ++
Sbjct: 193 EIGLKQHPQQVFEYFEKLRSKMNGPTLETVLDEQTAPIYVSVKATVLEATVLMKENNTTA 252
Query: 178 AVVTVENKP-RGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+V N+ GI TSKD+++RVI+ L V +VMTP P+ A + PI AL M
Sbjct: 253 VLVKDTNEELTGIFTSKDVVLRVIAAGLEPKQCSVVRVMTPQPDVANANLPIQQALRQMF 312
Query: 237 DGKFLHLPVV----------DRDGD--------VVDVVDVIHITHAAVAT--EILLDQIM 276
+G +L+LPV D GD ++ +VDV+ +T + + ++ LD M
Sbjct: 313 NGHYLNLPVFCDGANSGNEDDVSGDIRKKRVCNIIGIVDVLKLTCSTLNQIKQLELDDFM 372
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 2/123 (1%)
Query: 138 RMFRPSLSTIIPEK-SKVVTISPTDTVLMATKKMLELRLSSA-VVTVENKPRGILTSKDI 195
R RP T++ K ++ +T T TV ++ M+ R + VV E GI T+KD+
Sbjct: 40 RHKRPMPGTVLSLKPNEPITCKATATVYEVSQLMIARRENCVLVVGEEGDLMGIFTAKDL 99
Query: 196 LMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDV 255
RV+ L A + + K+MTPNP C + P DAL +M D F HLPV + VV +
Sbjct: 100 AFRVVGAGLNAGNVTINKIMTPNPICTMENNPASDALTLMVDKGFRHLPVKNELQQVVGI 159
Query: 256 VDV 258
+D+
Sbjct: 160 LDI 162
>gi|325182347|emb|CCA16800.1| myosinlike protein putative [Albugo laibachii Nc14]
Length = 2641
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 159/286 (55%), Gaps = 17/286 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
++ RR D+ L+ + +L GI+TD DIA RV+ + T VS++MT P FV + A
Sbjct: 1791 LSQRRSDSALVISEDGVLQGIVTDTDIAYRVVGVGNDPNRTIVSEIMTPKPEFVFAKDRA 1850
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
++A+ M+QG+FRHLPV+ + G V +L I KCL DAI R+E KA V K
Sbjct: 1851 LDAMFAMLQGRFRHLPVINDRGVVDGILRIQKCLDDAIQRLEGMQ---KASGEMAHSVTK 1907
Query: 120 HWGTSISGPNTFIETLRERMFRPSLSTIIP-EKSKVVTISPTDTVLMATKKMLELRLSSA 178
+ + P +ETL +++F PSL+ ++ +K +V+ +S DT+ +A +M+ ++ ++
Sbjct: 1908 QPKSDTARPRA-VETLLDKLFSPSLAALLERQKHEVLIVSKHDTISVAVGQMMRVKGAAL 1966
Query: 179 VV----TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHI 234
VV E K G+LT D+L+RVI+ L A+++ V +VM+ +P + ++DA +
Sbjct: 1967 VVDRSQVEEPKIVGLLTPNDLLLRVIANKLDANTSKVSQVMSMDPTIVSSSMLLLDAFRL 2026
Query: 235 MHDGKFLHLPVVDRDGD-------VVDVVDVIHITHAAVATEILLD 273
M+ +LPVV D V+DV + + T AV L D
Sbjct: 2027 MYRENLSYLPVVRESDDSKKVIVGVLDVFSLCYGTFTAVQGSSLHD 2072
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 94/278 (33%), Positives = 157/278 (56%), Gaps = 27/278 (9%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M R +A+ +T + + GILTD DIA RVIAR+L+ + + VMT P V + A
Sbjct: 2164 MRQARAEAIAVTSRDGEIQGILTDTDIARRVIARDLDPNKCLIESVMTSRPCCVHVNDSA 2223
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
+EA+ +M++G+F+HLPV+ ++G++ +LDI+KCL DA+ ME+ + K
Sbjct: 2224 IEAITRMLEGQFKHLPVIGQDGKISGMLDISKCLVDAVECMEKVHQANL----------K 2273
Query: 120 HWGTSISGPNTFIETLRERMFRPSLSTI--------IPEKSKVVTISPTDTVLMATKKML 171
H +S + +L R+F S S I + +SK I T +VL A+K M+
Sbjct: 2274 HDSSSTT-------SLISRVFSSSHSKIKYPTVLEALENESKPPIIPCTMSVLKASKLMV 2326
Query: 172 ELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDA 231
E + ++ +V E++ G+LT KDIL +++++ L A ST V VMT +P+ I+D+
Sbjct: 2327 EHKKAAIIVDSEDRIVGMLTPKDILRKLVAKGLKAKSTSVHMVMTKDPDFILPSATILDS 2386
Query: 232 LHIMHDGKFLHLPVVDRD-GDVVDVVDVIHITHAAVAT 268
L M+D L +PV+ DV+ +VDV+ ++ + ++
Sbjct: 2387 LRRMYDAGQLFMPVLGSGTKDVIGMVDVLSLSCSQFSS 2424
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 141/278 (50%), Gaps = 30/278 (10%)
Query: 1 MAARRVDALLLTDSNA-LLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTL 59
M R +A+L+ DS++ CG++TD+D+A R+IA E TP++K++ P V +
Sbjct: 828 MTRMRCEAVLVLDSSSKRFCGMITDEDVADRLIAHEWE-ATTPLAKIVEMCPV-VHTHQD 885
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
VE M + H+PV++N +V ++ ++ L+D + RM K
Sbjct: 886 VVEVFDLMQKEGVHHVPVLQNNQVHGVVTVSHYLHDTLERM------------------K 927
Query: 120 HWGTSIS----GPNTFIETLRERMFRPSLSTIIPE----KSKVVTISPTDTVLMATKKML 171
W ++ G + + + E + PSL +I + + + + + V T KM
Sbjct: 928 TWTQALQEESDGMDLTLYSFLENIATPSLDDLIQSGVWAQKRPLLVERNENVASVTSKMR 987
Query: 172 ELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDA 231
+ R + V+ +++ GI T+KD++ RV+++ V +VMTP+PE + DA
Sbjct: 988 KYRQIALVMDADSQLCGIFTTKDLIHRVLAKRRNPQLISVMEVMTPHPERVSPLQNAFDA 1047
Query: 232 LHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
L +MH+ +FLHLP++ D ++ +VDV+ I A + E
Sbjct: 1048 LRMMHEERFLHLPMIQND-QIIGIVDVLAIIGAILHQE 1084
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 114/233 (48%), Gaps = 13/233 (5%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPV 77
LCG++T+ D+A R++ +L+ VS++MT+ P +V S + A +AL M++ + HLPV
Sbjct: 1477 LCGVVTETDVANRMVGERRDLQIALVSEIMTKKPIWVSSQSSATDALNLMLEHRVHHLPV 1536
Query: 78 VEN--GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETL 135
++ ++ +L C+ +AI +E A + + +E S+S P + T+
Sbjct: 1537 KDSITKQITGVLHFQSCVLEAIQLLESAKSSFVHLPSELE-------MSVS-PKSARRTM 1588
Query: 136 RERMFRPSLSTIIPE-KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKD 194
++ F S+ ++ + K++VV + + K + ++ ++ GI T K
Sbjct: 1589 -DQTFGSSVGYVLSQHKNEVVALVGPQVCVADVCKRMATSGAALIIDPNGTCLGICTPKL 1647
Query: 195 ILMRVISQNLPADSTLVEKVMTP-NPECATIDTPIVDALHIMHDGKFLHLPVV 246
+L V + +T + VM P + D ++DA+ +M D LPVV
Sbjct: 1648 LLQYVRTLGHSLKTTAIADVMEPIHSASLQPDATVLDAMKLMRDRNVSALPVV 1700
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 75/181 (41%), Gaps = 19/181 (10%)
Query: 95 DAIARMERAAEKGKAI----AAAVEGVEKHWGTSISGPNTFIETLRERM---------FR 141
D I ME + K+I + A ++ T+ S +F T+ M
Sbjct: 1375 DVIHGMELCHQAFKSIQTRNSLAFHEMKSFLATTTSKSASFASTMDTSMTSSRDSDTHLS 1434
Query: 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPR-GILTSKDILMRVI 200
P+++ + P K+ + + L+ + S V+ E + G++T D+ R++
Sbjct: 1435 PTVAELRPAKAICIDVGAK---LLQLVSLFHQSQSPCVIVCEKEDLCGVVTETDVANRMV 1491
Query: 201 SQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIH 260
+ LV ++MT P + + DAL++M + + HLPV +D + V+H
Sbjct: 1492 GERRDLQIALVSEIMTKKPIWVSSQSSATDALNLMLEHRVHHLPV--KDSITKQITGVLH 1549
Query: 261 I 261
Sbjct: 1550 F 1550
>gi|50302383|ref|XP_451126.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640257|emb|CAH02714.1| KLLA0A02893p [Kluyveromyces lactis]
Length = 637
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 162/303 (53%), Gaps = 24/303 (7%)
Query: 1 MAARRVDALLLTD-------------SNALLCGILTDKDIATRVIARELNLEETPVSKVM 47
M+A+R + +L+ D S ALL GI T KD+A RV+ L + ++M
Sbjct: 97 MSAKRENCILVVDYDDDTNLEDDSSISGALL-GIFTAKDLAFRVVGTGLKASSVTIDQIM 155
Query: 48 TRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENG--EVIALLDIAKCLYDAIARMERAAE 105
T +P SDTLA +AL MV+ FRHLPV++ +I++LDI KC +A+ ++ER E
Sbjct: 156 TPHPLCATSDTLASDALNLMVERGFRHLPVIDEDTHAIISVLDITKCYQEAMEKLERMYE 215
Query: 106 KGKAIAAAVEGVEKHWGTSISGPNTF-----IETLRERMFRPSLSTIIPEKSKVVT-ISP 159
K + A + G G F E ++ M P+L +++ +++ V + ++
Sbjct: 216 HSKKLHDAFNSISNEIGGLSGGSQPFEVVKYFEHMKSVMNGPTLESVLHDETTVPSYVNV 275
Query: 160 TDTVLMATKKMLELRLSSAVVTVE-NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPN 218
+V A M + ++ +V E N+ GI TSKD+++RVI+ L + V +VMTP
Sbjct: 276 KTSVHEAALTMKDNHTTAVLVKNEVNEVSGIFTSKDVVLRVIAAGLDPKTVSVIRVMTPQ 335
Query: 219 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILLDQIMRQ 278
P+ A I AL M +G +L+LPVVD DG++V +V+V+ +T+A ++ L+
Sbjct: 336 PDVAPKTLSIQQALRKMFEGHYLNLPVVD-DGEIVGIVEVLKLTYATLSQINLISDAESH 394
Query: 279 QAQ 281
+Q
Sbjct: 395 NSQ 397
>gi|323452546|gb|EGB08420.1| hypothetical protein AURANDRAFT_26475, partial [Aureococcus
anophagefferens]
Length = 295
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 140/243 (57%), Gaps = 9/243 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R D LLT + L GI+TD D+A + +A L+L TPV ++MTR PT V + A
Sbjct: 55 MAAKRTDCALLTSAVGTLAGIVTDNDVARKAVAEGLDLAATPVERIMTRGPTCVRAGDGA 114
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMER--AAEKGKAIAAA-VEG 116
++AL+ MV FRHLPV+ + G ++ +L+I +CLY+AI ++E+ A+ KG +A + +
Sbjct: 115 IDALRSMVSNHFRHLPVLGDTGAIVGVLNIHRCLYEAIEKIEKLEASAKGSDVAESMLRA 174
Query: 117 VEKHWGTSISGPNTFIETLRERMFRPS---LSTIIPEKSKVVTISPTDTVLMATKKMLEL 173
+ K G + + L E + S L +++ + + +V A + +
Sbjct: 175 LAKRKGANPKQLAKLVGPLMESLAGSSAKTLRSVLDDGRTDCLVDAAASVRDAARTIAST 234
Query: 174 RLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALH 233
R + + T + GILT KD+L RV++++ A ST + VMTPNP+ +D +++ALH
Sbjct: 235 R-RAVLATADGGLAGILTPKDVLNRVVARD-AATSTPLAAVMTPNPDTIALDATLLEALH 292
Query: 234 IMH 236
+MH
Sbjct: 293 MMH 295
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 165 MATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATI 224
MA K+ L+SAV T+ GI+T D+ + +++ L +T VE++MT P C
Sbjct: 55 MAAKRTDCALLTSAVGTLA----GIVTDNDVARKAVAEGLDLAATPVERIMTRGPTCVRA 110
Query: 225 DTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
+DAL M F HLPV+ G +V V+++ + A+
Sbjct: 111 GDGAIDALRSMVSNHFRHLPVLGDTGAIVGVLNIHRCLYEAI 152
>gi|19114942|ref|NP_594030.1| conserved protein Mug20 [Schizosaccharomyces pombe 972h-]
gi|3183377|sp|O13965.1|MUG70_SCHPO RecName: Full=Meiotically up-regulated gene 70 protein
gi|2330788|emb|CAB11262.1| conserved protein Mug20 [Schizosaccharomyces pombe]
Length = 730
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 154/289 (53%), Gaps = 25/289 (8%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R + +L+ D + L GI+T DIATR + LN +T ++ +M+ +P + SDT
Sbjct: 89 MAAKRQNCVLVVDDDEQLAGIVTATDIATRCVGAGLNARQTLIADIMSTSPLCITSDTRF 148
Query: 61 VEALQKMVQGKFRHLPVVENG----------EVIALLDIAKCLYDAIARMERAAEKGKAI 110
+AL M++ KFRHLPVV +G +VI ++++ CL + + R+ R E + +
Sbjct: 149 DDALLLMIEHKFRHLPVVSDGGPDGSAGDEGDVIGIINMRACLREPLNRIARQQEAAQKL 208
Query: 111 AAAVEGVEKHW----------GTSISGPNT-----FIETLRERMFRPSLSTIIPEKSKVV 155
A+EG ++ +S+SG + ++E+L+++ + ++I +
Sbjct: 209 VEALEGAQEEIENKSVSGNTNSSSVSGNHAAEFLEYVESLKKKASGLEIMSLIDSSEEPF 268
Query: 156 TISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVM 215
+ TV AT+ M +S+ +V G+ T+ D+++RV++ L + V +VM
Sbjct: 269 LVGTRTTVAEATESMARSGVSAVLVMDNGAVSGVFTAHDVVLRVLAAGLDPYRSSVIRVM 328
Query: 216 TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
TP+P+CA + AL M +GKF +LPVVD ++ ++ + H+ A
Sbjct: 329 TPHPDCALASLRVSTALERMIEGKFSNLPVVDESDAIIGMLSLFHLATA 377
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Query: 162 TVLMATKKMLELRLSSAVVTVENKPR--GILTSKDILMRVISQNLPADSTLVEKVMTPNP 219
+++ T +++ + + V+ V++ + GI+T+ DI R + L A TL+ +M+ +P
Sbjct: 80 SLVTETAQLMAAKRQNCVLVVDDDEQLAGIVTATDIATRCVGAGLNARQTLIADIMSTSP 139
Query: 220 ECATIDTPIVDALHIMHDGKFLHLPVVDR---DGDVVDVVDVIHITHAAVATEILLDQIM 276
C T DT DAL +M + KF HLPVV DG D DVI I + L++I
Sbjct: 140 LCITSDTRFDDALLLMIEHKFRHLPVVSDGGPDGSAGDEGDVIGIINMRACLREPLNRIA 199
Query: 277 RQQ 279
RQQ
Sbjct: 200 RQQ 202
>gi|190346549|gb|EDK38658.2| hypothetical protein PGUG_02756 [Meyerozyma guilliermondii ATCC
6260]
Length = 551
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 144/272 (52%), Gaps = 7/272 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+A+R + +L+ D + L G+ T KD+A RV+ L+ V +VMT NP + + A
Sbjct: 82 MSAKRCNCVLIVDDHEKLLGLFTSKDLAFRVVGSGLDATVATVGQVMTSNPLTSSATSPA 141
Query: 61 VEALQKMVQGKFRHLPVVE--NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118
+AL +M++ KFRH+PVVE N E+I +LDI + + ER + ++ +
Sbjct: 142 SQALDQMLEHKFRHMPVVEDSNTEIIGVLDIVTFYKKQMKKFERLNANSARLFDTLDVLH 201
Query: 119 KHWGTSISGPN--TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G + P+ ++E+LR ++ P++ +++ S+ V S TV M++ +
Sbjct: 202 NDLGMESNPPHIEEYLESLRSQVNGPTIQSVVGNVSRPVFASLKATVY-EVANMMKANNT 260
Query: 177 SAVVTVENKPR--GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHI 234
S ++ + + GI++SKD+ R I+ L V +VMT NP+ T I AL
Sbjct: 261 SVILIRDGSGKVVGIVSSKDVTFRAIAAGLNPKICSVVRVMTANPDVVNTSTTIRQALKQ 320
Query: 235 MHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
M DG +L+LPV D ++ VVDV+ + HA +
Sbjct: 321 MLDGNYLNLPVEDSSHSIIAVVDVLSLIHATL 352
>gi|146418122|ref|XP_001485027.1| hypothetical protein PGUG_02756 [Meyerozyma guilliermondii ATCC
6260]
Length = 551
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 143/272 (52%), Gaps = 7/272 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M A+R + +L+ D + L G+ T KD+A RV+ L+ V +VMT NP + + A
Sbjct: 82 MLAKRCNCVLIVDDHEKLLGLFTSKDLAFRVVGSGLDATVATVGQVMTSNPLTSSATSPA 141
Query: 61 VEALQKMVQGKFRHLPVVE--NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118
+AL +M++ KFRH+PVVE N E+I +LDI + + ER + ++ +
Sbjct: 142 SQALDQMLEHKFRHMPVVEDSNTEIIGVLDIVTFYKKQMKKFERLNANSARLFDTLDVLH 201
Query: 119 KHWGTSISGPN--TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
G + P+ ++E+LR ++ P++ +++ S+ V S TV M++ +
Sbjct: 202 NDLGMESNPPHIEEYLESLRSQVNGPTIQSVVGNVSRPVFASLKATVY-EVANMMKANNT 260
Query: 177 SAVVTVENKPR--GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHI 234
S ++ + + GI++SKD+ R I+ L V +VMT NP+ T I AL
Sbjct: 261 SVILIRDGSGKVVGIVSSKDVTFRAIAAGLNPKICSVVRVMTANPDVVNTSTTIRQALKQ 320
Query: 235 MHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
M DG +L+LPV D ++ VVDV+ + HA +
Sbjct: 321 MLDGNYLNLPVEDSSHSIIAVVDVLSLIHATL 352
>gi|385302513|gb|EIF46642.1| cbs and pb1 domain-containing protein [Dekkera bruxellensis
AWRI1499]
Length = 457
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 155/301 (51%), Gaps = 57/301 (18%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPV 77
+ G++T KD+A RV A +L+ V+ +MT +P F T A EAL+ MV K RHLP+
Sbjct: 1 MVGLVTAKDMAFRVAAPDLD-TMCSVTSIMTTDPYFXPLSTSANEALRLMVXKKIRHLPL 59
Query: 78 VEN--GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH-----WGTSISGPNT 130
+++ G V+ LL+I KC Y A+ R+E+ A+ + + E + ++ +G P+
Sbjct: 60 IDSTTGVVVKLLNITKCFYHAMIRLEKMADGARRLQCTFENLNEYDLGSDYGMVQPLPSM 119
Query: 131 ------------FIETLRERMFR--------------PSLSTIIPEK----SKVVTISPT 160
F +R+R R P L++++ +K ++ T+ P+
Sbjct: 120 QVDPLAPTNEELFDRNIRQRKMRIANDIKRLISIMKQPELASLVTDKYFHLARCATLPPS 179
Query: 161 DTVLMATKKMLELRLSSAVVTVENKPR-----------------GILTSKDILMRVISQN 203
++L A + + L++A++ N P GI+T+KDIL RV++ N
Sbjct: 180 ASILEAAQMLKAKNLTAALIC--NAPSLKESNKSTDTIMKSDVIGIITTKDILFRVLANN 237
Query: 204 LPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITH 263
S V ++MTP P A I AL +M++GKFL+LP+V+ +G++ + +V+++T+
Sbjct: 238 YDLKSMKVARIMTPRPNFAQETMGIQSALRLMYEGKFLNLPIVNGEGEITGLANVLNLTN 297
Query: 264 A 264
A
Sbjct: 298 A 298
>gi|213407912|ref|XP_002174727.1| CBS domain-containing protein [Schizosaccharomyces japonicus
yFS275]
gi|212002774|gb|EEB08434.1| CBS domain-containing protein [Schizosaccharomyces japonicus
yFS275]
Length = 655
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 150/285 (52%), Gaps = 16/285 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R + LL+ D L GI+T D++ + + + + V MT P + SDT
Sbjct: 96 MAAKREECLLVVDEAQQLTGIITSLDVSRKCVGGGFDPRGSTVESFMTEGPICITSDTQF 155
Query: 61 VEALQKMVQGKFRHLPVV--------ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAA 112
+AL M++ +LPVV E+G+V+ +LDI CL++ ++R++R + +
Sbjct: 156 ADALALMLEHDRIYLPVVSDGTDEGCEDGDVLGILDICSCLHEPLSRVKRQEDAAAKLME 215
Query: 113 AVEGVEKHW-GTSISGPN------TFIETLRERMFRPSLSTIIPEK-SKVVTISPTDTVL 164
A+ G G+S+SG ++E+LR++ + ++ + + V + +VL
Sbjct: 216 ALAGAHDELDGSSLSGSAHASEFVEYVESLRQKAAGREVGALLEDVLFEPVLVGVRTSVL 275
Query: 165 MATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATI 224
A++ M + ++ +V + GI TS DI++RV++ L V ++MTP+P+CA +
Sbjct: 276 EASQLMAQAEANAVLVMDQGLVSGIFTSHDIVLRVVAAGLDPSKCSVIRIMTPHPDCALV 335
Query: 225 DTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
I AL M +G F +LPV+D + +V ++++ + A VA +
Sbjct: 336 SLHISTALERMLEGGFNNLPVIDENDGIVGLLNITQLAQAIVADQ 380
>gi|406602257|emb|CCH46150.1| Inosine-5'-monophosphate dehydrogenase [Wickerhamomyces ciferrii]
Length = 583
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 143/258 (55%), Gaps = 10/258 (3%)
Query: 20 GILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE 79
G+ T KD A +V+ + ++ + V +MT +P F+ +T EAL+ MV+ RHLP+++
Sbjct: 52 GLFTAKDFAYKVVGKGIDPDSALVKDIMTTSPLFLHMNTPMTEALEIMVKRGIRHLPLLD 111
Query: 80 NGEVI-ALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSIS-GPNTFIETLRE 137
N E I +LDI +C + A+ R+E+ + K + ++ V + + S S + I+ ++
Sbjct: 112 NEENIKGVLDITRCFHQAMLRLEKISNNAKKLNQVLQEVAEDYEDSRSLQAQSIIDDIKR 171
Query: 138 RMFR---PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVT-VENKPR---GIL 190
M P+L +I+ V I +V +A + M+ ++ +V + P+ GI
Sbjct: 172 LMQLIEVPTLHSIVEGSKPAVYIDSHASVRVAAEMMIANSTTALIVNDGTSSPKRVIGIF 231
Query: 191 TSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG 250
TSKDI RV+++N D+ V +V+T +PE A + I AL +M G FL+LPV D
Sbjct: 232 TSKDICFRVLAKNYDPDTCTVARVLTTSPEFAKSNITISAALRLMFQGHFLNLPVTDVVT 291
Query: 251 D-VVDVVDVIHITHAAVA 267
D ++ +V V+ +T+AA++
Sbjct: 292 DEIIGIVSVLQLTYAALS 309
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 60/109 (55%)
Query: 158 SPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP 217
S + VL A K MLE +V N+ G+ T+KD +V+ + + DS LV+ +MT
Sbjct: 22 SAEEGVLSAAKLMLENSAHCVLVQEGNRTVGLFTAKDFAYKVVGKGIDPDSALVKDIMTT 81
Query: 218 NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
+P ++TP+ +AL IM HLP++D + ++ V+D+ H A+
Sbjct: 82 SPLFLHMNTPMTEALEIMVKRGIRHLPLLDNEENIKGVLDITRCFHQAM 130
>gi|384489617|gb|EIE80839.1| hypothetical protein RO3G_05544 [Rhizopus delemar RA 99-880]
Length = 172
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 102/171 (59%), Gaps = 2/171 (1%)
Query: 67 MVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSI 125
MV FRHLPV E G++ LLDI KCLY AI RMERA + + A+EGVE HW
Sbjct: 1 MVSRGFRHLPVTNEIGDIFGLLDITKCLYQAIERMERAFGLSQKLYDALEGVEHHWVKES 60
Query: 126 SGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENK 185
S ++E +R+ M P+L +++ E T+ +A M ++ ++ +VT +
Sbjct: 61 SEVTDYLENMRKSMSCPTLESVLDEIPPAEVKHRTNVKEIAV-MMKKVHTTAVLVTRSHT 119
Query: 186 PRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMH 236
+GI TSKDI++RVI+ L ++ V +VMTP P+ AT +T ++DAL +M+
Sbjct: 120 LQGIFTSKDIVLRVIAAGLNPENCTVARVMTPKPDTATPETTVLDALKLMN 170
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 8 ALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKM 67
A+L+T S+ L GI T KDI RVIA LN E V++VMT P +T ++AL+ M
Sbjct: 111 AVLVTRSHTLQ-GIFTSKDIVLRVIAAGLNPENCTVARVMTPKPDTATPETTVLDALKLM 169
>gi|363753990|ref|XP_003647211.1| hypothetical protein Ecym_5661 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890847|gb|AET40394.1| hypothetical protein Ecym_5661 [Eremothecium cymbalariae
DBVPG#7215]
Length = 618
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 151/308 (49%), Gaps = 45/308 (14%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+ A R+ +L+ + LCGI+T KDI R + E ++T P S+ L
Sbjct: 37 IYAERIHCVLVLSGDRELCGIITTKDIVFRGCTMD---ERLKARDILTGTPVVGRSNMLV 93
Query: 61 VEALQKMVQGKFRHLPVVEN--GEVIALLDIAKCLYDAIARMER----AAEKGKAIAAAV 114
+AL+ M++ K RHLPV ++ G V+ +LDI KC + A+ ++E+ AA+ A+ +
Sbjct: 94 TQALELMIERKIRHLPVRQDSTGRVVGILDITKCFHQALLKLEKFTLSAAKLNNALNDVI 153
Query: 115 EG-VEKHWGTSISGPNTFIETLRERMFRPSLSTII--PEKSKVVTISPTDTVLMATKKML 171
+ W + + L ++M P+L TI+ P + I+ T + +++
Sbjct: 154 DSDTSLDWMRFLKN----VSKLIQQMETPNLKTILDSPHYATTPAIAGPSTSVAEALELM 209
Query: 172 ELRLSSAVVTVENKPR---------------------------GILTSKDILMRVIS--Q 202
L ++A++ + +P GI TSKD++ RV+ +
Sbjct: 210 RLHDTTAILVRDTEPLSKSSCKVGGTAHISIRKEGVQHDFNIIGIFTSKDVVCRVLQYPE 269
Query: 203 NLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHIT 262
N+ ++ + +VMT P A I AL +M+DG FL+LPV+D G +V ++ V+ +T
Sbjct: 270 NIDLNNCTLARVMTTRPNYALYTLGIHSALRMMYDGHFLNLPVIDERGSIVGLLTVLQLT 329
Query: 263 HAAVATEI 270
HAA++ ++
Sbjct: 330 HAALSCQL 337
>gi|414868429|tpg|DAA46986.1| TPA: hypothetical protein ZEAMMB73_412952 [Zea mays]
Length = 164
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/70 (72%), Positives = 62/70 (88%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTD+ LL GI+TDKDIATRV+A L +E+T +SK+MTRNP +V+SDTLA
Sbjct: 82 MAARRVDAVLLTDNQGLLSGIVTDKDIATRVVAEGLRVEQTIMSKIMTRNPVYVMSDTLA 141
Query: 61 VEALQKMVQG 70
+EALQKMVQG
Sbjct: 142 IEALQKMVQG 151
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKP--RGILTSKDILMRVISQNLPADST 209
SK +TI TVL A ++M R+ AV+ +N+ GI+T KDI RV+++ L + T
Sbjct: 64 SKALTIPEGTTVLDACRRMAARRVD-AVLLTDNQGLLSGIVTDKDIATRVVAEGLRVEQT 122
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDG 238
++ K+MT NP DT ++AL M G
Sbjct: 123 IMSKIMTRNPVYVMSDTLAIEALQKMVQG 151
>gi|50305749|ref|XP_452835.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641968|emb|CAH01686.1| KLLA0C14190p [Kluyveromyces lactis]
Length = 595
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 147/292 (50%), Gaps = 34/292 (11%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATR--VIARELNLEETPVSKVMTRNPTFVLSDT 58
M ++R +L+T S L GI+T KD+A + ++AR+ V++ P S
Sbjct: 34 MTSKRKYCVLVT-SGEHLEGIITTKDLAFKEGLVARD----------VLSTTPVLTPSSM 82
Query: 59 LAVEALQKMVQGKFRHLPVVE--NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116
AL MV+ K RHLP+++ + +++ +LDI KC + A+ R+E A+ + A++
Sbjct: 83 PVTSALLIMVEQKIRHLPIIDPNSKQIVGILDITKCFHQAMRRLEIMAQDSVKLNNAIQD 142
Query: 117 VEKHWGTSISGPN-TFIETLRERMFRPSLSTIIPEKSKVVT---ISPTDTVLMATKKMLE 172
V ++ T I TL E M P L +I+ T SPT TV A M E
Sbjct: 143 VIENEATMTRHKLLQDIATLIESMETPVLESILDSDVYNTTPLFASPTTTVSKAMSMMSE 202
Query: 173 LRLSSAVVTVENKPR------------GILTSKDILMRVISQNLPAD--STLVEKVMTPN 218
+ S+A++ ++ + GI TSKD + RV+ Q D S + +VMT
Sbjct: 203 NK-STAILIHDSSTKSDIRNNNDCNIIGIFTSKDFVCRVLGQGNSVDPESCTLARVMTTR 261
Query: 219 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEI 270
P A I AL +M++G FL+LPV+D G+++ ++ V+ +THAA+ +
Sbjct: 262 PNFAFQSLGIHSALRMMYEGHFLNLPVIDDTGNILGLISVLQLTHAALRCQF 313
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 161 DTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPE 220
D++ K M R +VT GI+T+KD+ + + + V++ P
Sbjct: 25 DSIYNVAKLMTSKRKYCVLVTSGEHLEGIITTKDLAFK--------EGLVARDVLSTTPV 76
Query: 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDG-DVVDVVDVIHITHAAV 266
P+ AL IM + K HLP++D + +V ++D+ H A+
Sbjct: 77 LTPSSMPVTSALLIMVEQKIRHLPIIDPNSKQIVGILDITKCFHQAM 123
>gi|110739694|dbj|BAF01754.1| hypothetical protein [Arabidopsis thaliana]
Length = 280
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/65 (72%), Positives = 55/65 (84%)
Query: 187 RGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVV 246
RGI TSKDILMRV+++NLP TLVE VMT NPE +DTPIV+ALHIMH+GKFLHLPV
Sbjct: 2 RGIFTSKDILMRVVAENLPPSETLVETVMTQNPESTIVDTPIVEALHIMHEGKFLHLPVT 61
Query: 247 DRDGD 251
D++GD
Sbjct: 62 DKEGD 66
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 38/62 (61%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPV 77
L GI T KDI RV+A L ET V VMT+NP + DT VEAL M +GKF HLPV
Sbjct: 1 LRGIFTSKDILMRVVAENLPPSETLVETVMTQNPESTIVDTPIVEALHIMHEGKFLHLPV 60
Query: 78 VE 79
+
Sbjct: 61 TD 62
>gi|296086527|emb|CBI32116.3| unnamed protein product [Vitis vinifera]
Length = 355
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/99 (57%), Positives = 71/99 (71%), Gaps = 10/99 (10%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+AR+VD +LLTDSNA+L GI+ DKDIATRVI EL E+T VSK+MTR+P V SD+LA
Sbjct: 66 MSARKVDVVLLTDSNAILSGIVIDKDIATRVIVEELRPEQTAVSKIMTRHPILVNSDSLA 125
Query: 61 VEALQKMVQGKFRHLPVVE----------NGEVIALLDI 89
+EAL+KMVQGK VV+ NG+ I+LL I
Sbjct: 126 IEALEKMVQGKRLRSMVVQSWLLLKGQNANGKAISLLRI 164
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 15/125 (12%)
Query: 126 SGPNTFIETLRE-RMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRL---SSAVVT 181
S P + +R R S + +IPE I+ +D M + + +++ L S+A+++
Sbjct: 30 SSPTCLVYGVRTVNKLRLSKALMIPE-----GITVSDACRMMSARKVDVVLLTDSNAILS 84
Query: 182 VENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFL 241
GI+ KDI RVI + L + T V K+MT +P D+ ++AL M GK L
Sbjct: 85 ------GIVIDKDIATRVIVEELRPEQTAVSKIMTRHPILVNSDSLAIEALEKMVQGKRL 138
Query: 242 HLPVV 246
VV
Sbjct: 139 RSMVV 143
>gi|297611311|ref|NP_001065859.2| Os11g0170300 [Oryza sativa Japonica Group]
gi|255679827|dbj|BAF27704.2| Os11g0170300, partial [Oryza sativa Japonica Group]
Length = 97
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 54/60 (90%)
Query: 68 VQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISG 127
V GKFRHLPVVENGEVIA+LDIAKCLYDAI+R+E+AAE+G A+AAAVEGVE+ G ++ G
Sbjct: 4 VLGKFRHLPVVENGEVIAMLDIAKCLYDAISRLEKAAEQGSALAAAVEGVERQVGDNLPG 63
>gi|298705826|emb|CBJ34183.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 196
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 72/109 (66%), Gaps = 1/109 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA R DA +L D+ L GI++D+D+A RV+A L+ T VS+VMT +PT V A
Sbjct: 1 MADVRTDAAILLDNKGHLEGIISDQDVARRVVANRLDPSSTTVSEVMTPHPTIVHMADSA 60
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGK 108
+E L M++ +FRHLPV++ G V LL IAKCLYDAI R+++ A + +
Sbjct: 61 MECLGIMIEKRFRHLPVIDGEGNVTGLLSIAKCLYDAIQRLKKKAARAE 109
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 170 MLELRLSSAVVTVENKPR--GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTP 227
M ++R +A++ ++NK GI++ +D+ RV++ L ST V +VMTP+P +
Sbjct: 1 MADVRTDAAIL-LDNKGHLEGIISDQDVARRVVANRLDPSSTTVSEVMTPHPTIVHMADS 59
Query: 228 IVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
++ L IM + +F HLPV+D +G+V ++ + + A+
Sbjct: 60 AMECLGIMIEKRFRHLPVIDGEGNVTGLLSIAKCLYDAI 98
>gi|45200750|ref|NP_986320.1| AGL347Cp [Ashbya gossypii ATCC 10895]
gi|44985448|gb|AAS54144.1| AGL347Cp [Ashbya gossypii ATCC 10895]
gi|374109565|gb|AEY98470.1| FAGL347Cp [Ashbya gossypii FDAG1]
Length = 629
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 131/295 (44%), Gaps = 50/295 (16%)
Query: 11 LTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQG 70
L + GI+T KD+A R + E V V+T V AL+ MV
Sbjct: 70 LVGDGGRVAGIITTKDLALRGRG---SARERRVRDVVTWGAVTVDEHAPVNAALELMVVR 126
Query: 71 KFRHLPVVENG--EVIALLDIAKCLYDAIARMERAAEKGKAI--------AAAVEGVEKH 120
+ RHLPV++ G EV+ +LDI KC A+A +E AA G + A +G +
Sbjct: 127 RLRHLPVLQAGSREVLGVLDITKCFQLAMAWLEWAAVGGTRLQDVLSDVACGAADGRRRA 186
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEK---SKVVTISPTDTVLMATKKMLELRLSS 177
G I + ++M P+L ++ + + + SPT TV A M L ++
Sbjct: 187 LG---------IARVVQQMEMPTLQWLLASRRYATGLAVASPTTTVREALALMRRLDTTA 237
Query: 178 AVV--------TVENKPR---------------GILTSKDILMRVISQNL--PADSTLVE 212
+V + P GI TSKD++ RV+ Q L D +
Sbjct: 238 VLVRDVEPLAAGAQGLPSPHVRPGRGADAYTVIGIFTSKDVVCRVLQQGLDPETDGCTLA 297
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
+ MT P+ A + AL +MHDG +L+LPVV G +V + V+ +THAA++
Sbjct: 298 RFMTSWPQYAAETEGLHSALLMMHDGHYLNLPVVKTTGAIVGLFTVLQLTHAALS 352
>gi|407773810|ref|ZP_11121110.1| hypothetical protein TH2_07911 [Thalassospira profundimaris WP0211]
gi|407283256|gb|EKF08797.1| hypothetical protein TH2_07911 [Thalassospira profundimaris WP0211]
Length = 149
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 73/119 (61%), Gaps = 3/119 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA R++ A+++ D+NA L GI T++D+ RV+A+ L+ P+SKVMT +P + + A
Sbjct: 31 MAERKIGAVIIVDNNARLAGIFTERDLVNRVVAKGLDAASVPLSKVMTADPDTLGPNDSA 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARM--ERAAEKGKAIAAAVEGV 117
+ AL M ++RHLPVV+ +V+ ++ I + L++ + R E E+ K I + GV
Sbjct: 91 MSALDLMSARRYRHLPVVDGDKVVGMVSI-RDLFNVVKRQLEEDVREREKFIFGSDYGV 148
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 65/110 (59%), Gaps = 6/110 (5%)
Query: 145 STIIP---EKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPR--GILTSKDILMRV 199
+ I+P ++ + T++P D+V+ A M E ++ AV+ V+N R GI T +D++ RV
Sbjct: 3 TKIVPGVVQEQSIATLNPADSVMDAVTMMAERKIG-AVIIVDNNARLAGIFTERDLVNRV 61
Query: 200 ISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
+++ L A S + KVMT +P+ + + AL +M ++ HLPVVD D
Sbjct: 62 VAKGLDAASVPLSKVMTADPDTLGPNDSAMSALDLMSARRYRHLPVVDGD 111
>gi|163793432|ref|ZP_02187407.1| Predicted signal-transduction protein containing CBS domains [alpha
proteobacterium BAL199]
gi|159181234|gb|EDP65749.1| Predicted signal-transduction protein containing CBS domains [alpha
proteobacterium BAL199]
Length = 142
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RR+ A+ + + L GI T++D+ RV+ R+L+ TPV +VMT +P D
Sbjct: 31 MTERRIGAVPVVGPDGALVGIFTERDVMCRVVDRDLDPATTPVGQVMTASPKTATPDWPI 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAI 97
++AL+ M G +RHLPVV+NG+++A++ I + LY A+
Sbjct: 91 LKALEHMADGGYRHLPVVDNGKLLAIVSI-RDLYAAV 126
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 80/129 (62%), Gaps = 6/129 (4%)
Query: 146 TIIPEKSK---VVTISPTDTVLMATKKMLELRLSSA-VVTVENKPRGILTSKDILMRVIS 201
TIIP+ + +VT++P+D+V + M E R+ + VV + GI T +D++ RV+
Sbjct: 4 TIIPDAIRAQTLVTVTPSDSVRATVRLMTERRIGAVPVVGPDGALVGIFTERDVMCRVVD 63
Query: 202 QNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHI 261
++L +T V +VMT +P+ AT D PI+ AL M DG + HLPVVD +G ++ +V + +
Sbjct: 64 RDLDPATTPVGQVMTASPKTATPDWPILKALEHMADGGYRHLPVVD-NGKLLAIVSIRDL 122
Query: 262 THAAVATEI 270
+AAV ++
Sbjct: 123 -YAAVTGKL 130
>gi|409038017|gb|EKM48265.1| hypothetical protein PHACADRAFT_132508 [Phanerochaete carnosa
HHB-10118-sp]
Length = 426
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 75/126 (59%), Gaps = 13/126 (10%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENK----------PR--GILTSKDILMR 198
+++ T+ P TV K M E R ++AV +E+ PR GI TSKD+++R
Sbjct: 4 RTEPATVGPKTTVREVAKLMKERR-TTAVCVMESPSTSMGGTAATPRIAGIFTSKDVVLR 62
Query: 199 VISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
VI+ L A V +VMTP+P+ A + DAL MH+G +L+LPV++ DG ++ +VDV
Sbjct: 63 VIAAGLDAGRCSVVRVMTPHPDTAPPTMTVHDALKKMHNGHYLNLPVIETDGRLIAIVDV 122
Query: 259 IHITHA 264
+ +T+A
Sbjct: 123 LKLTYA 128
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPV 77
+ GI T KD+ RVIA L+ V +VMT +P +AL+KM G + +LPV
Sbjct: 50 IAGIFTSKDVVLRVIAAGLDAGRCSVVRVMTPHPDTAPPTMTVHDALKKMHNGHYLNLPV 109
Query: 78 VE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETL 135
+E +G +IA++D+ K Y + +M A++A G + G + G F E+L
Sbjct: 110 IETDGRLIAIVDVLKLTYATLEQM-------NAMSAEAAGGAEPEGGPMWG--RFFESL 159
>gi|407780598|ref|ZP_11127819.1| signal transduction protein with CBS domains [Oceanibaculum indicum
P24]
gi|407208825|gb|EKE78732.1| signal transduction protein with CBS domains [Oceanibaculum indicum
P24]
Length = 140
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 71/119 (59%), Gaps = 3/119 (2%)
Query: 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENK-PRGILTSKDILM 197
M +P++S +I +S +V + T TVL A K M + R+ + +V E K P GI T +D +
Sbjct: 1 MSKPAVSELILHRSPIV-MRDTATVLEACKIMQKHRIGAIIVVDEEKRPVGIFTGRDAVN 59
Query: 198 RVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
RV+++ L TL+ VMT P+C + D +DAL M D + HLPVV +DG +V +V
Sbjct: 60 RVLAKGLDGRRTLLSAVMTAKPDCVSPDWVTLDALRQMSDCGYRHLPVV-KDGKIVGLV 117
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 52/87 (59%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M R+ A+++ D GI T +D RV+A+ L+ T +S VMT P V D +
Sbjct: 31 MQKHRIGAIIVVDEEKRPVGIFTGRDAVNRVLAKGLDGRRTLLSAVMTAKPDCVSPDWVT 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
++AL++M +RHLPVV++G+++ L+
Sbjct: 91 LDALRQMSDCGYRHLPVVKDGKIVGLV 117
>gi|397629836|gb|EJK69525.1| hypothetical protein THAOC_09208, partial [Thalassiosira oceanica]
Length = 1618
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 55/80 (68%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A++R DA ++TD+N L GI+TD D+ RV+A+EL+ T VS VMT NP+ V + A
Sbjct: 1537 LASKRGDAAIITDTNGGLAGIITDTDVTRRVVAKELHPSITHVSDVMTANPSCVSMSSSA 1596
Query: 61 VEALQKMVQGKFRHLPVVEN 80
+A+ M+ +FRHLPV ++
Sbjct: 1597 TDAMLTMIDNRFRHLPVTDD 1616
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 10/112 (8%)
Query: 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKP-RGILTSKDILMR 198
RP TI E DTVL + + R +A++T N GI+T D+ R
Sbjct: 1516 LRPKAPTIAKED---------DTVLAVAQLLASKRGDAAIITDTNGGLAGIITDTDVTRR 1566
Query: 199 VISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG 250
V+++ L T V VMT NP C ++ + DA+ M D +F HLPV D G
Sbjct: 1567 VVAKELHPSITHVSDVMTANPSCVSMSSSATDAMLTMIDNRFRHLPVTDDSG 1618
>gi|357515721|ref|XP_003628149.1| CBS domain containing protein [Medicago truncatula]
gi|355522171|gb|AET02625.1| CBS domain containing protein [Medicago truncatula]
Length = 212
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 50/69 (72%), Gaps = 8/69 (11%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTD+N LL GI+TDK + ++ + VSKVMTRNP FV SDTLA
Sbjct: 75 MAARRVDAVLLTDANGLLFGIMTDK--------IQGSVTGSMVSKVMTRNPLFVTSDTLA 126
Query: 61 VEALQKMVQ 69
++A QKMV
Sbjct: 127 IDAHQKMVH 135
>gi|357515775|ref|XP_003628176.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355522198|gb|AET02652.1| F-box/LRR-repeat protein [Medicago truncatula]
Length = 561
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 49/69 (71%), Gaps = 8/69 (11%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTD+N LL GI+TDK I V + VSKVMTRNP FV SDTLA
Sbjct: 75 MAARRVDAVLLTDANGLLFGIMTDK-IQGSVTG-------SMVSKVMTRNPLFVTSDTLA 126
Query: 61 VEALQKMVQ 69
++A QKMV
Sbjct: 127 IDAHQKMVH 135
>gi|407768617|ref|ZP_11115995.1| hypothetical protein TH3_04029 [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407288301|gb|EKF13779.1| hypothetical protein TH3_04029 [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 149
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 68/118 (57%), Gaps = 1/118 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M R++ A+++ D+NA L GI T++D+ RV+A+ L+ TP+ +VMT NP + A
Sbjct: 31 MTERKIGAVIIVDNNARLAGIFTERDLVNRVVAKGLDAASTPLKQVMTANPDTLAPGDTA 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMER-AAEKGKAIAAAVEGV 117
+ AL+ M ++RHLPV++ V+ ++ I A++E E+ K I + GV
Sbjct: 91 MNALELMSARRYRHLPVLDGENVVGMVSIRDLFNVVKAQLEEDLREREKFIFGSDYGV 148
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 74/122 (60%), Gaps = 6/122 (4%)
Query: 147 IIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPR--GILTSKDILMRVISQNL 204
++ E+S + T++P D+V+ A M E ++ AV+ V+N R GI T +D++ RV+++ L
Sbjct: 9 VVKEQS-IATLNPADSVMDAVNMMTERKIG-AVIIVDNNARLAGIFTERDLVNRVVAKGL 66
Query: 205 PADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG--DVVDVVDVIHIT 262
A ST +++VMT NP+ ++AL +M ++ HLPV+D + +V + D+ ++
Sbjct: 67 DAASTPLKQVMTANPDTLAPGDTAMNALELMSARRYRHLPVLDGENVVGMVSIRDLFNVV 126
Query: 263 HA 264
A
Sbjct: 127 KA 128
>gi|433446763|ref|ZP_20410655.1| signal-transduction protein containing cAMP-binding and CBS domains
[Anoxybacillus flavithermus TNO-09.006]
gi|432000270|gb|ELK21170.1| signal-transduction protein containing cAMP-binding and CBS domains
[Anoxybacillus flavithermus TNO-09.006]
Length = 611
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 138 RMFRPSLSTIIPEKS----KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSK 193
R F S S ++P + VVT+ PT TV A KKM +SS VVT E GILT
Sbjct: 146 RKFGDSTSFVVPVQDLMVRDVVTLPPTATVQEAAKKMAATHISSIVVTDEQTLCGILTET 205
Query: 194 DILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVV 253
D++ RV+ Q+LP D T+VE+VMT + + DAL +M + HLPVVD DG V
Sbjct: 206 DLVERVLGQSLPYD-TVVEQVMTKDVATISRFAYYYDALAMMIERGVKHLPVVD-DGKVE 263
Query: 254 DVV 256
+V
Sbjct: 264 GIV 266
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA + ++++TD L CGILT+ D+ RV+ + L + T V +VMT++ +
Sbjct: 182 MAATHISSIVVTDEQTL-CGILTETDLVERVLGQSLPYD-TVVEQVMTKDVATISRFAYY 239
Query: 61 VEALQKMVQGKFRHLPVVENGEV 83
+AL M++ +HLPVV++G+V
Sbjct: 240 YDALAMMIERGVKHLPVVDDGKV 262
>gi|83310691|ref|YP_420955.1| CBS domain-containing protein [Magnetospirillum magneticum AMB-1]
gi|82945532|dbj|BAE50396.1| CBS domain [Magnetospirillum magneticum AMB-1]
Length = 145
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ARRV A+++TD + L GI T++D RV+A +N + T ++ VMT +PT + +D
Sbjct: 31 MKARRVGAVMVTDHHGKLKGIFTERDCLFRVLAEGVNPDTTTLALVMTADPTTITADRKL 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGK 108
AL M FRH+PVV++G + ++ I L ++ ER EK K
Sbjct: 91 GHALHMMHDNGFRHIPVVDHGIPVGMISIRDALGSELSAFER--EKAK 136
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+T+ TV A ++M R+ + +VT K +GI T +D L RV+++ + D+T +
Sbjct: 16 LTLPAAATVREAARQMKARRVGAVMVTDHHGKLKGIFTERDCLFRVLAEGVNPDTTTLAL 75
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
VMT +P T D + ALH+MHD F H+PVVD
Sbjct: 76 VMTADPTTITADRKLGHALHMMHDNGFRHIPVVD 109
>gi|288956922|ref|YP_003447263.1| hypothetical protein AZL_000810 [Azospirillum sp. B510]
gi|288909230|dbj|BAI70719.1| hypothetical protein AZL_000810 [Azospirillum sp. B510]
Length = 153
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA RR+ A+L+T+ AL GI+T++D+ TRV+A L+ E TP+S VMT +P + A
Sbjct: 32 MAERRIAAVLVTEGRAL-KGIVTERDMTTRVVAAGLDPETTPLSSVMTADPDTLEPSATA 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDI 89
+ AL M + +RHLPV +GEV+ ++ I
Sbjct: 91 LAALDLMERRHYRHLPVAVDGEVVGMVSI 119
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Query: 157 ISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMT 216
+ P TV A M E R+++ +VT +GI+T +D+ RV++ L ++T + VMT
Sbjct: 19 LPPGATVRDAATLMAERRIAAVLVTEGRALKGIVTERDMTTRVVAAGLDPETTPLSSVMT 78
Query: 217 PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+P+ + AL +M + HLPV DG+VV +V +
Sbjct: 79 ADPDTLEPSATALAALDLMERRHYRHLPVA-VDGEVVGMVSI 119
>gi|328873281|gb|EGG21648.1| hypothetical protein DFA_01534 [Dictyostelium fasciculatum]
Length = 222
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 7/124 (5%)
Query: 148 IPEKSK---VVTISPTDTVLMATKKMLELRLSSA-VVTVENKPRGILTSKDILMRVISQN 203
I EK K +VT+ + ++ A +KM++ ++ S VV ENK +GI + +D L +V
Sbjct: 69 ILEKKKDNEIVTVGEHELIINAIRKMVDKKIGSILVVNSENKLKGIFSERDYLSKVNLAG 128
Query: 204 LPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV---DVIH 260
L + + VE+VMT N + DT +DA+ IM KF HLPVVD + ++ VV D+I+
Sbjct: 129 LSSRESPVEQVMTKNVKTIKSDTCTLDAMKIMTTKKFRHLPVVDNNKHIIGVVSIQDLIN 188
Query: 261 ITHA 264
H+
Sbjct: 189 SVHS 192
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +++ ++L+ +S L GI +++D ++V L+ E+PV +VMT+N + SDT
Sbjct: 94 MVDKKIGSILVVNSENKLKGIFSERDYLSKVNLAGLSSRESPVEQVMTKNVKTIKSDTCT 153
Query: 61 VEALQKMVQGKFRHLPVVENGE-VIALLDI 89
++A++ M KFRHLPVV+N + +I ++ I
Sbjct: 154 LDAMKIMTTKKFRHLPVVDNNKHIIGVVSI 183
>gi|212640085|ref|YP_002316605.1| hypothetical protein Aflv_2263 [Anoxybacillus flavithermus WK1]
gi|212561565|gb|ACJ34620.1| Multidomain protein (contains CAP-ED, 2CBS and a predicted
nucleotidyltransferase domains) [Anoxybacillus
flavithermus WK1]
Length = 611
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 138 RMFRPSLSTIIPEKS----KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSK 193
R F + S ++P + VVT+ PT TV A KKM +SS VVT E GILT
Sbjct: 146 RKFGDATSFVVPVQDVMIRDVVTLPPTATVQEAAKKMAATHISSIVVTDEQTLCGILTET 205
Query: 194 DILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVV 253
D++ RV+ Q+LP D T+VE+VMT + + DAL +M + HLPVVD DG V
Sbjct: 206 DLVERVLGQSLPYD-TVVERVMTKDVATISRFAYYYDALALMIERGVKHLPVVD-DGKVQ 263
Query: 254 DVV 256
+V
Sbjct: 264 GIV 266
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA + ++++TD L CGILT+ D+ RV+ + L + T V +VMT++ +
Sbjct: 182 MAATHISSIVVTDEQTL-CGILTETDLVERVLGQSLPYD-TVVERVMTKDVATISRFAYY 239
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIA 90
+AL M++ +HLPVV++G+V ++ +
Sbjct: 240 YDALALMIERGVKHLPVVDDGKVQGIVTFS 269
>gi|347524337|ref|YP_004781907.1| putative signal transduction protein with CBS domains [Pyrolobus
fumarii 1A]
gi|343461219|gb|AEM39655.1| putative signal transduction protein with CBS domains [Pyrolobus
fumarii 1A]
Length = 152
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVE-NKPRGILTSKDILMRVISQNLPADSTLV 211
+VVTI+P + V+ A +KM + + S VV + + GI+T +D++ RV+++N T V
Sbjct: 16 EVVTITPDEPVIEAARKMKQYEIGSVVVVSQRGEVIGIITERDLVTRVVAENRDPLKTTV 75
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV---DVIHIT 262
+VMTPNP DTP+ A +M + HLPVVD+ G +V ++ D+I T
Sbjct: 76 REVMTPNPITVYDDTPLEIAARLMSERGVGHLPVVDKAGRLVGIIAKSDLIEFT 129
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + ++++ + GI+T++D+ TRV+A + +T V +VMT NP V DT
Sbjct: 33 MKQYEIGSVVVVSQRGEVIGIITERDLVTRVVAENRDPLKTTVREVMTPNPITVYDDTPL 92
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALL 87
A + M + HLPVV+ G ++ ++
Sbjct: 93 EIAARLMSERGVGHLPVVDKAGRLVGII 120
>gi|452962639|gb|EME67756.1| CBS domain-containing protein [Magnetospirillum sp. SO-1]
Length = 141
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVEN--KPRGILTSKDILMRVISQNLPADS 208
+++ V P T + + ++ R AV+ ++ K RGI T +D L V+++ + D+
Sbjct: 7 RNQTVLAMPATTTVREAARQMKARGVGAVMVTDHHGKLRGIFTERDCLFDVVAEGINPDT 66
Query: 209 TLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
T + VMTP+PE T D + ALH+MHD F H+PVVD
Sbjct: 67 TTLSMVMTPDPETITADRKLGQALHMMHDNGFRHIPVVD 105
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M AR V A+++TD + L GI T++D V+A +N + T +S VMT +P + +D
Sbjct: 27 MKARGVGAVMVTDHHGKLRGIFTERDCLFDVVAEGINPDTTTLSMVMTPDPETITADRKL 86
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEK 106
+AL M FRH+PVV++G + ++ I L ++ ER K
Sbjct: 87 GQALHMMHDNGFRHIPVVDHGIPVGMVSIRDALGSELSNFEREVVK 132
>gi|87121438|ref|ZP_01077327.1| hypothetical protein MED121_21440 [Marinomonas sp. MED121]
gi|86163281|gb|EAQ64557.1| hypothetical protein MED121_21440 [Marinomonas sp. MED121]
Length = 622
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 60/87 (68%), Gaps = 2/87 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA +RV +LL+T + L+ GI+TD+D+ TRVIA+ L+ +E PV+ +MT++P + S A
Sbjct: 181 MADKRVSSLLITHEDELV-GIVTDRDLRTRVIAKGLSYDE-PVNVIMTKDPITIDSGDFA 238
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
EA+ KM+ HLP+ +NG+ I ++
Sbjct: 239 SEAVMKMMAQNVHHLPITKNGKAIGVI 265
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 23/168 (13%)
Query: 131 FIETLRERMFRPSLSTIIPEKSKVVTI--SPTDTVL--------------MATKKMLELR 174
F E +RE R +L S+ V++ P ++L A ++M + R
Sbjct: 126 FFELIRENRLRSALDAQTQNSSQDVSLMTCPVKSLLRRPPISIEEDVSIQQAAQRMADKR 185
Query: 175 LSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTP--IVDAL 232
+SS ++T E++ GI+T +D+ RVI++ L D V +MT +P TID+ +A+
Sbjct: 186 VSSLLITHEDELVGIVTDRDLRTRVIAKGLSYDEP-VNVIMTKDP--ITIDSGDFASEAV 242
Query: 233 HIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA-AVATEILLDQIMRQQ 279
M HLP+ ++G + V+ I + + L+ I +QQ
Sbjct: 243 MKMMAQNVHHLPIT-KNGKAIGVISSGDIVQKESHGSMYLISDIYKQQ 289
>gi|407769372|ref|ZP_11116748.1| cyclic nucleotide-binding protein [Thalassospira xiamenensis M-5 =
DSM 17429]
gi|407287699|gb|EKF13179.1| cyclic nucleotide-binding protein [Thalassospira xiamenensis M-5 =
DSM 17429]
Length = 622
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 66/125 (52%), Gaps = 11/125 (8%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+A RV LL+T + + GI+TD+D+ RV+A + +E PV+ +MT NP + D A
Sbjct: 180 MSAERVSCLLITQNGDKVAGIMTDRDLRNRVVAEARSFDE-PVTNIMTPNPISIGPDDYA 238
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCL----------YDAIARMERAAEKGKAI 110
+AL M + RHLPV+++G+ I ++ L I +M R A+ K I
Sbjct: 239 FDALLTMTRHNVRHLPVMKDGKAIGMITTNNLLARQSLSAVHMVGRIRKMTRPADMAKVI 298
Query: 111 AAAVE 115
A E
Sbjct: 299 AQVPE 303
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVE-NKPRGILTSKDILMRVISQNLPADSTLVE 212
+V+I ++L A K M R+S ++T +K GI+T +D+ RV+++ D V
Sbjct: 164 LVSIDIGASILEAGKLMSAERVSCLLITQNGDKVAGIMTDRDLRNRVVAEARSFDEP-VT 222
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
+MTPNP D DAL M HLPV+ +DG + ++
Sbjct: 223 NIMTPNPISIGPDDYAFDALLTMTRHNVRHLPVM-KDGKAIGMI 265
>gi|358635061|dbj|BAL22358.1| putative inosine-5'-monophosphate dehydrogenase related protein
[Azoarcus sp. KH32C]
Length = 144
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 58/95 (61%)
Query: 156 TISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVM 215
T+SP T+ ++ M E+R S+ +V + GI+T +DI+ RV+S L +T VE VM
Sbjct: 17 TVSPGSTIRNSSIIMREMRSSAVLVVEKGMLLGIVTERDIVFRVVSLGLDPAATSVESVM 76
Query: 216 TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG 250
T + + D P ALH+M++G F H+PVVD +G
Sbjct: 77 TTSVQTIHEDKPFGHALHLMYEGGFRHMPVVDDNG 111
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M R A+L+ + LL GI+T++DI RV++ L+ T V VMT + + D
Sbjct: 31 MREMRSSAVLVVEKGMLL-GIVTERDIVFRVVSLGLDPAATSVESVMTTSVQTIHEDKPF 89
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALL 87
AL M +G FRH+PVV +NG + LL
Sbjct: 90 GHALHLMYEGGFRHMPVVDDNGIPVGLL 117
>gi|372486716|ref|YP_005026281.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Dechlorosoma suillum PS]
gi|359353269|gb|AEV24440.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Dechlorosoma suillum PS]
Length = 143
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA RV ALL+ + + L GI T++D RV+A L+ E T +S+VMT NP V +
Sbjct: 31 MAAARVGALLVVE-HGFLTGIFTERDALNRVLAPGLDPEHTLLSEVMTANPRAVPPEKPL 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114
AL M G +RH+PVV+ G + ++ + L I ER E + IA A+
Sbjct: 90 SYALHLMHIGGYRHMPVVQAGRPLGMVSVRDALGAEICDFERDLESLEKIATAL 143
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 3/119 (2%)
Query: 143 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQ 202
S++ II +++ V T + TV A ++M R+ + +V GI T +D L RV++
Sbjct: 5 SIAHIISQQTPV-TATADLTVREACQRMAAARVGALLVVEHGFLTGIFTERDALNRVLAP 63
Query: 203 NLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD--RDGDVVDVVDVI 259
L + TL+ +VMT NP + P+ ALH+MH G + H+PVV R +V V D +
Sbjct: 64 GLDPEHTLLSEVMTANPRAVPPEKPLSYALHLMHIGGYRHMPVVQAGRPLGMVSVRDAL 122
>gi|152998333|ref|YP_001343168.1| hypothetical protein Mmwyl1_4338 [Marinomonas sp. MWYL1]
gi|150839257|gb|ABR73233.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Marinomonas sp. MWYL1]
Length = 618
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA RV +LL+TD + L+ GI+TD+D+ TR +A L + TP+S++MTR+P + S A
Sbjct: 177 MAEHRVSSLLITDKDELI-GIVTDRDLRTRAVAEGLAYD-TPISEIMTRDPIVMDSGDYA 234
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
EA+ KM+ H+P+V+NG I ++
Sbjct: 235 SEAVLKMMDRNVHHIPIVKNGRPIGVV 261
>gi|386827482|ref|ZP_10114589.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Beggiatoa alba B18LD]
gi|386428366|gb|EIJ42194.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Beggiatoa alba B18LD]
Length = 144
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 70/118 (59%), Gaps = 6/118 (5%)
Query: 143 SLSTIIPEKS--KVVTISPTDTVLMATKKMLELRLSSAVVTVENK--PRGILTSKDILMR 198
+L I+ +K +VV+I T T+L ATKKM E AV+ V N P GI+T +D+L
Sbjct: 2 TLKRILDQKGMCEVVSIVETATMLAATKKMCE-HYVGAVLIVSNAGLPIGIVTERDVLRF 60
Query: 199 VISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
+++ D+ LV VMT + T DTPI +AL IM + KF H+P+VD G +V +V
Sbjct: 61 CATRSTELDTVLVTDVMTKDLIIGTFDTPIDEALTIMTEKKFRHIPIVD-SGKIVGMV 117
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M V A+L+ + L GI+T++D+ R L+ V+ VMT++ DT
Sbjct: 31 MCEHYVGAVLIVSNAGLPIGIVTERDVLRFCATRSTELDTVLVTDVMTKDLIIGTFDTPI 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIA 90
EAL M + KFRH+P+V++G+++ ++ +
Sbjct: 91 DEALTIMTEKKFRHIPIVDSGKIVGMVSLG 120
>gi|254481246|ref|ZP_05094491.1| Putative nucleotidyltransferase domain family protein [marine gamma
proteobacterium HTCC2148]
gi|214038409|gb|EEB79071.1| Putative nucleotidyltransferase domain family protein [marine gamma
proteobacterium HTCC2148]
Length = 635
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA RRV + + + LL GI+TD+D+ R +A+ L ETPVS+VMT NP +V
Sbjct: 195 MAKRRVSSAFVVKNTELL-GIVTDRDLRVRAVAKAL-APETPVSQVMTTNPEWVEGQETI 252
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
A M QG+F HLPV NGE + ++
Sbjct: 253 FAATLLMTQGRFHHLPVKINGETVGIV 279
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 76/146 (52%), Gaps = 7/146 (4%)
Query: 140 FRPSLSTIIPE-----KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKD 194
++P L+T++ + + ++ + P+ TV + M + R+SSA V + GI+T +D
Sbjct: 160 YQPELNTMMQQVNTLMSTNLLMMEPSATVQETAQAMAKRRVSSAFVVKNTELLGIVTDRD 219
Query: 195 ILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVD 254
+ +R +++ L A T V +VMT NPE I A +M G+F HLP V +G+ V
Sbjct: 220 LRVRAVAKAL-APETPVSQVMTTNPEWVEGQETIFAATLLMTQGRFHHLP-VKINGETVG 277
Query: 255 VVDVIHITHAAVATEILLDQIMRQQA 280
+V + A + L Q + +QA
Sbjct: 278 IVTTSGLILAKQDDPVYLVQHISRQA 303
>gi|402851205|ref|ZP_10899376.1| Inosine-5'-monophosphate dehydrogenase [Rhodovulum sp. PH10]
gi|402498575|gb|EJW10316.1| Inosine-5'-monophosphate dehydrogenase [Rhodovulum sp. PH10]
Length = 143
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 66/106 (62%), Gaps = 2/106 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRN-PTFVLSDTL 59
+ R + AL++T + + + GI++++DI + R + ETPVS++MTR T DT+
Sbjct: 30 LGERGIGALVVTGTESRVIGIVSERDIVRALGTRGGEVLETPVSEIMTRKVATCTQHDTI 89
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
E +Q+M +GKFRH+PVVE+ +I ++ I + + +ME+ ++
Sbjct: 90 D-ELMQQMTEGKFRHVPVVEHDRLIGIVSIGDVVKSRLEQMEQESD 134
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 10/121 (8%)
Query: 143 SLSTIIPEK-SKVVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILMRVI 200
++ TI+ K S V TI P +V ATK + E + + VVT E++ GI++ +DI+ +
Sbjct: 2 TVKTILDRKGSDVATIDPATSVATATKTLGERGIGALVVTGTESRVIGIVSERDIVRALG 61
Query: 201 SQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD--------GDV 252
++ T V ++MT T I + + M +GKF H+PVV+ D GDV
Sbjct: 62 TRGGEVLETPVSEIMTRKVATCTQHDTIDELMQQMTEGKFRHVPVVEHDRLIGIVSIGDV 121
Query: 253 V 253
V
Sbjct: 122 V 122
>gi|374293294|ref|YP_005040329.1| hypothetical protein AZOLI_2946 [Azospirillum lipoferum 4B]
gi|357425233|emb|CBS88119.1| conserved protein of unknown function; cystathionine beta synthase
domain [Azospirillum lipoferum 4B]
Length = 153
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA +R+ A+L+T+ L GI+T++D+ TRV+A L+ + TP+S VMT +P ++ A
Sbjct: 32 MAEKRIAAVLVTEGRTL-KGIVTERDMTTRVVAAGLDPDTTPLSSVMTADPDTLVPSATA 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDI 89
+ AL M + +RHLP+ +GEV+ ++ I
Sbjct: 91 LSALDLMERRHYRHLPIAVDGEVVGMVSI 119
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Query: 150 EKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADST 209
+ ++ + P TV A M E R+++ +VT +GI+T +D+ RV++ L D+T
Sbjct: 12 KNQELTCLPPGATVRDAATLMAEKRIAAVLVTEGRTLKGIVTERDMTTRVVAAGLDPDTT 71
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+ VMT +P+ + AL +M + HLP+ DG+VV +V +
Sbjct: 72 PLSSVMTADPDTLVPSATALSALDLMERRHYRHLPIA-VDGEVVGMVSI 119
>gi|336315596|ref|ZP_08570505.1| Putative signal-transduction protein [Rheinheimera sp. A13L]
gi|335880055|gb|EGM77945.1| Putative signal-transduction protein [Rheinheimera sp. A13L]
Length = 606
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +RV LL+ + + L GILTD+D+ +RV+A+ L T VS+VMT+ P + +D A
Sbjct: 167 MTEQRVSCLLI-EQDEQLVGILTDRDLRSRVVAKSLP-ASTTVSEVMTKTPQSIETDRFA 224
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
EA+Q+M Q HLPV ++G+ I +L
Sbjct: 225 FEAIQQMSQYNIHHLPVEQDGKAIGVL 251
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
+ V+I+ ++TV A M E R+S ++ + + GILT +D+ RV++++LPA ST V
Sbjct: 150 RKVSIASSNTVQQAALLMTEQRVSCLLIEQDEQLVGILTDRDLRSRVVAKSLPA-STTVS 208
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
+VMT P+ D +A+ M HLP V++DG + V+
Sbjct: 209 EVMTKTPQSIETDRFAFEAIQQMSQYNIHHLP-VEQDGKAIGVL 251
>gi|119898433|ref|YP_933646.1| putative inosine-5'-monophosphate dehydrogenase related protein
[Azoarcus sp. BH72]
gi|119670846|emb|CAL94759.1| putative inosine-5'-monophosphate dehydrogenase related protein
[Azoarcus sp. BH72]
Length = 143
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 57/96 (59%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
K++T TVL A+++M +L + S ++ + GI T +D L+RVI+ T +
Sbjct: 13 QKILTADEHMTVLEASRRMTDLHVGSIMIVHDGHLSGIFTERDALVRVIAAGRDPARTRL 72
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
+VMT +P+ + D P+ A+H+M++G F H+PV D
Sbjct: 73 SEVMTRDPQSISSDRPLGHAMHLMYEGGFRHVPVTD 108
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 15 NALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRH 74
+ L GI T++D RVIA + T +S+VMTR+P + SD A+ M +G FRH
Sbjct: 44 DGHLSGIFTERDALVRVIAAGRDPARTRLSEVMTRDPQSISSDRPLGHAMHLMYEGGFRH 103
Query: 75 LPVVENGEVIALLDIAKCL 93
+PV + G I ++ L
Sbjct: 104 VPVTDCGRPIGMISARDAL 122
>gi|281211188|gb|EFA85354.1| hypothetical protein PPL_02357 [Polysphondylium pallidum PN500]
Length = 239
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 71/120 (59%), Gaps = 5/120 (4%)
Query: 149 PEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVEN-KPRGILTSKDILMRVISQNLPAD 207
EK +++TI+ ++ A +KM + ++ + +V N + GI T +D + +V Q L +
Sbjct: 92 KEKRELLTINSDQLIIEALRKMTQNKVGAIMVLDSNGQLEGIFTERDYVGKVALQGLSSR 151
Query: 208 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGD----VVDVVDVIHITH 263
+LV++VMT + + D+ +VD +HIM + +F HLPVVD++ + +V + D+I H
Sbjct: 152 QSLVKEVMTRGVKTISADSCVVDTMHIMTNQRFRHLPVVDKESNKVLGMVSIQDLIRSVH 211
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +V A+++ DSN L GI T++D +V + L+ ++ V +VMTR + +D+
Sbjct: 113 MTQNKVGAIMVLDSNGQLEGIFTERDYVGKVALQGLSSRQSLVKEVMTRGVKTISADSCV 172
Query: 61 VEALQKMVQGKFRHLPVV--ENGEVIALLDI 89
V+ + M +FRHLPVV E+ +V+ ++ I
Sbjct: 173 VDTMHIMTNQRFRHLPVVDKESNKVLGMVSI 203
>gi|312136468|ref|YP_004003805.1| signal transduction protein with cbs domains [Methanothermus
fervidus DSM 2088]
gi|311224187|gb|ADP77043.1| putative signal transduction protein with CBS domains
[Methanothermus fervidus DSM 2088]
Length = 267
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 59/212 (27%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETP-----VSKVMTRNPTFVL 55
M +V +LL+ D+N L GI+T+KDIA ++++ + E P VS MT++P V
Sbjct: 27 MEKNKVSSLLVVDNNKKLVGIVTEKDIAGKLLSSKY--ENLPPSHIYVSTAMTKDPITVS 84
Query: 56 SDTLAVEALQKMVQGKFRHLPVVENGEVIA------LLDIAKCLYDAIARMERAAEKGKA 109
+ +A M++ + +LPVVENGE++ LLD+ KC
Sbjct: 85 PNITVGKAADIMLENRISNLPVVENGELVGIITKTDLLDVCKC----------------- 127
Query: 110 IAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKK 169
+ RE + ++ST +++TI PTD++L A +
Sbjct: 128 -----------------------KPYRELKVKDAMST------EIITIGPTDSLLHARRI 158
Query: 170 MLELRLSSAVVTVENKPRGILTSKDILMRVIS 201
M++ R+ V ++ GI+T++D+ +I+
Sbjct: 159 MVDTRIGRLPVMDDDILVGIITARDVAKAIIA 190
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPR-GILTSKDILMRVIS---QNLPADSTL 210
VTI+ + A K M + ++SS +V NK GI+T KDI +++S +NLP
Sbjct: 12 VTINKNKNIAEALKSMEKNKVSSLLVVDNNKKLVGIVTEKDIAGKLLSSKYENLPPSHIY 71
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
V MT +P + + + A IM + + +LPVV+ +G++V ++
Sbjct: 72 VSTAMTKDPITVSPNITVGKAADIMLENRISNLPVVE-NGELVGII 116
>gi|291279952|ref|YP_003496787.1| cyclic nucleotide binding protein [Deferribacter desulfuricans
SSM1]
gi|290754654|dbj|BAI81031.1| cyclic nucleotide binding protein [Deferribacter desulfuricans
SSM1]
Length = 640
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELN--LEETPVSKVMTRNPTFVLSDT 58
M + + ++L+ D L GI+T++D+ T+V+ARE+ L +T VMT NP + D+
Sbjct: 187 MTLKGIGSVLVCDGVGKLLGIITERDLVTKVLAREIGVCLRDTKAKDVMTPNPFVISPDS 246
Query: 59 LAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCL 93
EA M+ RHLPVVENG+++ ++ + L
Sbjct: 247 YMYEAAAFMISHGIRHLPVVENGKILGIVTVRDLL 281
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
Query: 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVE-NKPRGILTSKDILMR 198
F+ +S I+ S V T P TV + M + S +V K GI+T +D++ +
Sbjct: 159 FQKKVSEIM--SSPVETCKPEATVSEIARVMTLKGIGSVLVCDGVGKLLGIITERDLVTK 216
Query: 199 VISQNLPA--DSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
V+++ + T + VMTPNP + D+ + +A M HLPVV+ +G ++ +V
Sbjct: 217 VLAREIGVCLRDTKAKDVMTPNPFVISPDSYMYEAAAFMISHGIRHLPVVE-NGKILGIV 275
Query: 257 DV 258
V
Sbjct: 276 TV 277
>gi|374850834|dbj|BAL53812.1| signal transduction protein [uncultured planctomycete]
Length = 151
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 59/109 (54%)
Query: 150 EKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADST 209
+ +V+TISP+ TVL A + M + + VV E GIL+ +DIL RV++ ST
Sbjct: 11 KGGQVLTISPSQTVLAAAELMNQHHIGCLVVCDERGICGILSERDILQRVVAARRDPSST 70
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
V +VMT A D PI A IM + + HLPV+ DG + ++ +
Sbjct: 71 TVGEVMTTQVIFAAPDMPIDQAQRIMMEKRIRHLPVIGEDGQLCGMISI 119
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + L++ D + CGIL+++DI RV+A + T V +VMT F D
Sbjct: 31 MNQHHIGCLVVCDERGI-CGILSERDILQRVVAARRDPSSTTVGEVMTTQVIFAAPDMPI 89
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIA 90
+A + M++ + RHLPV+ E+G++ ++ I
Sbjct: 90 DQAQRIMMEKRIRHLPVIGEDGQLCGMISIG 120
>gi|358636709|dbj|BAL24006.1| putative signal transduction protein with CBS domains [Azoarcus sp.
KH32C]
Length = 140
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M R V A+L+ D L GI T +D A R++ E + T + VMT P + D A
Sbjct: 31 MCDRHVGAVLVADRAHHLLGIFTGRD-AVRMLGNEADAAHTKLDDVMTHKPVTIPPDAHA 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
++AL+ M G FRHLPVV NG+V+A++
Sbjct: 90 IDALRLMNDGGFRHLPVVRNGKVVAIV 116
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 6/115 (5%)
Query: 144 LSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPR--GILTSKDILMRVIS 201
+S I+ ++ ++ + P +V +A ++M + R AV+ + GI T +D + R++
Sbjct: 6 ISDIVQDQDPLM-LPPDASVKLACERMCD-RHVGAVLVADRAHHLLGIFTGRDAV-RMLG 62
Query: 202 QNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
A T ++ VMT P D +DAL +M+DG F HLPVV R+G VV +V
Sbjct: 63 NEADAAHTKLDDVMTHKPVTIPPDAHAIDALRLMNDGGFRHLPVV-RNGKVVAIV 116
>gi|89901569|ref|YP_524040.1| signal-transduction protein [Rhodoferax ferrireducens T118]
gi|89346306|gb|ABD70509.1| putative signal-transduction protein with CBS domains [Rhodoferax
ferrireducens T118]
Length = 146
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 65/114 (57%), Gaps = 10/114 (8%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ++L+ D+ +L GILT++D+ TRV+A+ LN + T S VMTRNP V D
Sbjct: 31 MTKANCGSILVIDAAGVLQGILTERDLMTRVLAKALNPQTTLASDVMTRNPQSVGPDMRV 90
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113
+A+ M++ FRHLP++ G+++ + I DA+ R E G A++ A
Sbjct: 91 ADAVVIMIERGFRHLPIINTAGKILGVFSI----RDAMPR-----EIGNAVSLA 135
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 148 IPEKSKVVTISPTDTVLMATKKMLELRLSSA-VVTVENKPRGILTSKDILMRVISQNLPA 206
IP++ VV++ P +V A M + S V+ +GILT +D++ RV+++ L
Sbjct: 10 IPQR-HVVSLLPQASVWDAACIMTKANCGSILVIDAAGVLQGILTERDLMTRVLAKALNP 68
Query: 207 DSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+TL VMT NP+ D + DA+ IM + F HLP+++ G ++ V +
Sbjct: 69 QTTLASDVMTRNPQSVGPDMRVADAVVIMIERGFRHLPIINTAGKILGVFSI 120
>gi|320583158|gb|EFW97374.1| Nuclear polyadenylated RNA-binding protein [Ogataea parapolymorpha
DL-1]
Length = 875
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/150 (30%), Positives = 82/150 (54%), Gaps = 15/150 (10%)
Query: 132 IETLRERMFRPSLSTIIPEKSKVVTISP-----TDTVLMATKKMLELRLSSAVVTVENKP 186
++ L + M +P+L +++ + + +SP T T ++ +L+ + +A++ E+
Sbjct: 68 LKRLIDVMTQPNLKSVLEDSD--LEMSPPLLIGTKTSVLDAVNLLKEKNVTALLVCESPS 125
Query: 187 R--------GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDG 238
GILTSKD+ RV++ ++ ST + +VMT P A I AL +M +G
Sbjct: 126 APAHCSHIIGILTSKDVAFRVLASHIDPKSTSIARVMTLRPNFADETLEIHTALRLMFEG 185
Query: 239 KFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268
KFL+LP+ D +G V +V V+ +T+A + T
Sbjct: 186 KFLNLPIKDSNGYVTGLVSVLQLTYALLKT 215
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 65/113 (57%), Gaps = 9/113 (7%)
Query: 1 MAARRVDALLLTDSNAL------LCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFV 54
+ + V ALL+ +S + + GILT KD+A RV+A ++ + T +++VMT P F
Sbjct: 110 LKEKNVTALLVCESPSAPAHCSHIIGILTSKDVAFRVLASHIDPKSTSIARVMTLRPNFA 169
Query: 55 LSDTLAVE-ALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAE 105
+TL + AL+ M +GKF +LP+ + NG V L+ + + Y + ++ + E
Sbjct: 170 -DETLEIHTALRLMFEGKFLNLPIKDSNGYVTGLVSVLQLTYALLKTLDGSTE 221
>gi|407773467|ref|ZP_11120768.1| cyclic nucleotide-binding protein [Thalassospira profundimaris
WP0211]
gi|407283931|gb|EKF09459.1| cyclic nucleotide-binding protein [Thalassospira profundimaris
WP0211]
Length = 622
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ RV LL+T+ + GI+TD+D+ RVIA+ + +E PV+ +MT P + D A
Sbjct: 180 MSKERVSCLLITEGGDGVAGIMTDRDLRNRVIAKGRSYDE-PVTAIMTEKPISIDPDQYA 238
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
+AL M + RHLPV+++G+ + ++
Sbjct: 239 FDALLTMTRNNIRHLPVMKDGKAVGMI 265
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVISQNLPADSTLV 211
++V+I + ++L A + M + R+S ++T GI+T +D+ RVI++ D V
Sbjct: 163 ELVSIDTSASILEAGQLMSKERVSCLLITEGGDGVAGIMTDRDLRNRVIAKGRSYDEP-V 221
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
+MT P D DAL M HLPV+ +DG V ++
Sbjct: 222 TAIMTEKPISIDPDQYAFDALLTMTRNNIRHLPVM-KDGKAVGMI 265
>gi|390449419|ref|ZP_10235025.1| putative signal transduction protein with CBS domains
[Nitratireductor aquibiodomus RA22]
gi|389664112|gb|EIM75620.1| putative signal transduction protein with CBS domains
[Nitratireductor aquibiodomus RA22]
Length = 143
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 2/106 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARE-LNLEETPVSKVMTRNPTFVLSDTL 59
++ R + A+++T ++ + GIL+++DI RVI R+ E P+S+VMT
Sbjct: 30 LSERGIGAVVVTKADGRIAGILSERDI-VRVIGRDGAGALEQPISRVMTSKVQRCHEQNT 88
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
E +Q M G+FRHLPV ENG++ ++ I + I +ER AE
Sbjct: 89 INEVMQIMTTGRFRHLPVEENGKIAGIISIGDVVKKRIEDVEREAE 134
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 143 SLSTIIPEKSK-VVTISPTDTVLMATKKMLELRLSSAVVTVENKPR--GILTSKDILMRV 199
++ I+ K + VVTI+P D L ++L R AVV + R GIL+ +DI+ +
Sbjct: 2 TVKAILDAKGRNVVTIAP-DMKLADAAQLLSERGIGAVVVTKADGRIAGILSERDIVRVI 60
Query: 200 ISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
A + +VMT + I + + IM G+F HLP V+ +G + ++ +
Sbjct: 61 GRDGAGALEQPISRVMTSKVQRCHEQNTINEVMQIMTTGRFRHLP-VEENGKIAGIISI 118
>gi|20093964|ref|NP_613811.1| CBS domain-containing protein [Methanopyrus kandleri AV19]
gi|19886923|gb|AAM01741.1| CBS domain-containing protein [Methanopyrus kandleri AV19]
Length = 278
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 106/212 (50%), Gaps = 36/212 (16%)
Query: 63 ALQKMVQGKFRHLPVVENGEVIALLDI--AKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
A+ M++ FR +PV E GE + L+ I K + D + E+ K I E+
Sbjct: 26 AVDTMIRYGFRRIPVTEPGE-LELVGIMTGKDVLDYLV-----GERRKII-------ERR 72
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
+G +TF+ L E P S + +++V I+P DTV A + M E + + +
Sbjct: 73 YG------STFLPALHE----PVRSLM---RTEVYVITPYDTVRKAVRTMFEFEVGALPI 119
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
+ K GI+T +DI+ + + T VE++MT +PE D +++A IM D +F
Sbjct: 120 VKDKKLVGIITERDIMADLYDV---LEDTRVEEIMTEDPETVPSDITVLEAAEIMVDREF 176
Query: 241 LHLPVVD--RDGDVVDVVDVIHITH-AAVATE 269
LPVV+ R +V DV+H H +++ATE
Sbjct: 177 RRLPVVENGRLCGLVTATDVLH--HVSSMATE 206
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 81/179 (45%), Gaps = 32/179 (17%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPV 77
L GI+T++DI + LE+T V ++MT +P V SD +EA + MV +FR LPV
Sbjct: 125 LVGIITERDIMADLYD---VLEDTRVEEIMTEDPETVPSDITVLEAAEIMVDREFRRLPV 181
Query: 78 VENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRE 137
VENG + L+ L H +S++ + ++ E
Sbjct: 182 VENGRLCGLVTATDVL--------------------------HHVSSMATETSPDASVEE 215
Query: 138 RMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDIL 196
M P + I+ E V+TI P + A M + S VVT N GI+T +DI+
Sbjct: 216 VMDVP-VEEIMTE--DVITIEPDVNIEEAALTMKGANVGSLVVTEGNDVIGIITERDIM 271
>gi|88703627|ref|ZP_01101343.1| Putative nucleotidyltransferase DUF294 [Congregibacter litoralis
KT71]
gi|88702341|gb|EAQ99444.1| Putative nucleotidyltransferase DUF294 [Congregibacter litoralis
KT71]
Length = 623
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 83/168 (49%), Gaps = 28/168 (16%)
Query: 1 MAARRVD-ALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTL 59
MA RRV A ++ D L GILTD+D+ TRV+AR L+ E PV++VMT NP + SD
Sbjct: 183 MAERRVSSAFVVADDE--LQGILTDRDLRTRVLARGLS-SEMPVNEVMTPNPEAIASDET 239
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIAL-----LDIAK-----CLYDAIARMERAAEKGKA 109
M Q +F HLPV+E G + + L +AK L I+R +
Sbjct: 240 LFATTLMMTQRRFHHLPVLEEGRLAGIVTTSDLIVAKKNDPVYLVQHISRQD-------- 291
Query: 110 IAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTI 157
+VEG+++ G S N +E + M P +S I+ S V I
Sbjct: 292 ---SVEGIQELVG---SMGNLMVEWVSGGMRAPQVSQILTAISDAVAI 333
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
++T+ T TV A M E R+SSA V +++ +GILT +D+ RV+++ L ++ V +
Sbjct: 167 ILTVPSTATVREAAMAMAERRVSSAFVVADDELQGILTDRDLRTRVLARGLSSEMP-VNE 225
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
VMTPNPE D + +M +F HLPV++
Sbjct: 226 VMTPNPEAIASDETLFATTLMMTQRRFHHLPVLE 259
>gi|144899054|emb|CAM75918.1| CBS domain [Magnetospirillum gryphiswaldense MSR-1]
Length = 144
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 56/97 (57%)
Query: 150 EKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADST 209
+ +V + T TV A ++M + R+ + V+ + K GI T +D L RV+++ ++T
Sbjct: 11 KNQSIVALPHTATVREAAQEMAKRRIGAIVIVDDGKLMGIFTERDGLFRVLAEGRDPENT 70
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVV 246
+++VMT D P++ ALHIMHD F H+PVV
Sbjct: 71 TLDQVMTGKLSTIAPDRPLLHALHIMHDNGFRHMPVV 107
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA RR+ A+++ D L+ GI T++D RV+A + E T + +VMT + + D
Sbjct: 31 MAKRRIGAIVIVDDGKLM-GIFTERDGLFRVLAEGRDPENTTLDQVMTGKLSTIAPDRPL 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAI 110
+ AL M FRH+PVV+ G+ + +L I L + + EK +A+
Sbjct: 90 LHALHIMHDNGFRHMPVVQGGKPVGMLSIRDALDYELVHFVKEIEKKEAL 139
>gi|358637076|dbj|BAL24373.1| putative inosine-5'-monophosphate dehydrogenase related protein
[Azoarcus sp. KH32C]
Length = 143
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 148 IPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVEN-KPRGILTSKDILMRVISQNLPA 206
I + ++T + +V AT++M + ++ + ++T + K GI T +D L++V++ +
Sbjct: 8 IVKDQAILTATADLSVREATRRMADAKVGAIMITAKGGKLAGIFTERDALVKVLANGVDP 67
Query: 207 DSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
D T + +VMT +P A D + ALH+M+DG F H+PVVD
Sbjct: 68 DKTTLAQVMTSDPTTANADKNLGYALHMMYDGGFRHVPVVD 108
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA +V A+++T L GI T++D +V+A ++ ++T +++VMT +PT +D
Sbjct: 30 MADAKVGAIMITAKGGKLAGIFTERDALVKVLANGVDPDKTTLAQVMTSDPTTANADKNL 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCL 93
AL M G FRH+PVV+NG + ++ L
Sbjct: 90 GYALHMMYDGGFRHVPVVDNGVPVGMISARDAL 122
>gi|452966038|gb|EME71053.1| CBS domain-containing protein [Magnetospirillum sp. SO-1]
Length = 143
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNP-TFVLSDTL 59
MAA +V A+L+ D GI T++D+ + A + E PV MTRNP T SDT+
Sbjct: 30 MAAFKVGAVLVVDEKGGTLGIFTERDVTRCLAAHGAAVLENPVGDHMTRNPLTCQGSDTV 89
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113
A + M FRH+PV+ENG++ ++ I + +++ R E AE +A A
Sbjct: 90 A-SVMSTMSTHHFRHMPVMENGQLKGIVSIRDLVSNSLERAEFEAEAMRAYVTA 142
>gi|357385164|ref|YP_004899888.1| inosine-5'-monophosphate dehydrogenase [Pelagibacterium
halotolerans B2]
gi|351593801|gb|AEQ52138.1| inosine-5'-monophosphate dehydrogenase [Pelagibacterium
halotolerans B2]
Length = 141
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNP-TFVLSDTL 59
+A + A+++ D N + GI++++DI + PVS +MTR P T SDT+
Sbjct: 30 LARHNIGAVVVVD-NGKVEGIISERDIVRHLAGSAEGFRAKPVSTLMTRAPKTCTKSDTV 88
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAA 104
+A+ M QG+FRHLPVVENG++I ++ I + I E+ A
Sbjct: 89 D-QAMNIMSQGRFRHLPVVENGQLIGIISIGDVVKRKIEEAEQEA 132
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 9/123 (7%)
Query: 139 MFRPSLSTIIPEKSKVVTISPTDTV--LMATKKMLELRLSSAVVTVEN-KPRGILTSKDI 195
MF S+ TI + S VVT+ T+ L+AT L AVV V+N K GI++ +DI
Sbjct: 1 MFVESILTI--KGSDVVTVRSDSTIGDLIAT---LARHNIGAVVVVDNGKVEGIISERDI 55
Query: 196 LMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDV 255
+ + + V +MT P+ T + A++IM G+F HLPVV+ +G ++ +
Sbjct: 56 VRHLAGSAEGFRAKPVSTLMTRAPKTCTKSDTVDQAMNIMSQGRFRHLPVVE-NGQLIGI 114
Query: 256 VDV 258
+ +
Sbjct: 115 ISI 117
>gi|295699415|ref|YP_003607308.1| signal transduction protein with CBS domains [Burkholderia sp.
CCGE1002]
gi|295438628|gb|ADG17797.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1002]
Length = 147
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + AL++TD +++ GI+T++D A +++ + + + TPV +M++ FV D
Sbjct: 33 MAEKGIGALVVTDGDSI-AGIVTERDYARKIVLMDRSSKATPVRDIMSKAVRFVRPDQTT 91
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
+ + M + + RHLPV+ENG +I ++ I + D IA +
Sbjct: 92 EDCMALMTERRMRHLPVIENGRLIGMVSIGDLVKDIIAEQQ 132
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 149 PEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADS 208
P S+V TI D+V A + M E + + VVT + GI+T +D +++ + + +
Sbjct: 12 PNSSEVYTIGADDSVYEAIRLMAEKGIGALVVTDGDSIAGIVTERDYARKIVLMDRSSKA 71
Query: 209 TLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
T V +M+ D D + +M + + HLPV++ +G ++ +V +
Sbjct: 72 TPVRDIMSKAVRFVRPDQTTEDCMALMTERRMRHLPVIE-NGRLIGMVSI 120
>gi|328951661|ref|YP_004368996.1| signal transduction protein with CBS domains [Marinithermus
hydrothermalis DSM 14884]
gi|328451985|gb|AEB12886.1| putative signal transduction protein with CBS domains
[Marinithermus hydrothermalis DSM 14884]
Length = 135
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL 210
+ VVT+ P+ +V A + M ++ + S VV +P G+LT +DI +RV+++ L ++T
Sbjct: 8 RPDVVTVPPSASVADAARLMADINVGSVVVVEGLRPVGVLTDRDITVRVVAEGLDPEATP 67
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV---DVIHI 261
V +VMTP+P + + +AL + D PVVD +G +V + DV+H+
Sbjct: 68 VRRVMTPDPVTLGEELSLFEALEEVKDKAIRRFPVVDPEGRLVGIFTLDDVLHL 121
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 19 CGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVV 78
G+LTD+DI RV+A L+ E TPV +VMT +P + + EAL+++ R PVV
Sbjct: 44 VGVLTDRDITVRVVAEGLDPEATPVRRVMTPDPVTLGEELSLFEALEEVKDKAIRRFPVV 103
Query: 79 E-NGEVIALLDIAKCLY 94
+ G ++ + + L+
Sbjct: 104 DPEGRLVGIFTLDDVLH 120
>gi|119944050|ref|YP_941730.1| signal protein [Psychromonas ingrahamii 37]
gi|119862654|gb|ABM02131.1| signaling protein with a cAMP-binding site and CBS domains
[Psychromonas ingrahamii 37]
Length = 614
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ +R+ +L++ D L CGILTD+D+ RV+A+ LN + V ++MT++P + + L
Sbjct: 175 MSKKRLSSLVVVDQEKL-CGILTDRDLRNRVLAKGLN-GDLLVGQIMTKDPVIIEPNALM 232
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
EA+ KM + HLPVV G I ++
Sbjct: 233 FEAMLKMSENNIHHLPVVREGRPIGII 259
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 3/128 (2%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+ TI+ ++ A M + RLSS VV + K GILT +D+ RV+++ L D LV +
Sbjct: 159 LTTITADASIHQAALLMSKKRLSSLVVVDQEKLCGILTDRDLRNRVLAKGLNGD-LLVGQ 217
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILL- 272
+MT +P + + +A+ M + HLPVV R+G + ++ + + + +LL
Sbjct: 218 IMTKDPVIIEPNALMFEAMLKMSENNIHHLPVV-REGRPIGIITSTDLIRSQSSQPLLLI 276
Query: 273 DQIMRQQA 280
QI RQ +
Sbjct: 277 GQIERQNS 284
>gi|254470144|ref|ZP_05083548.1| inosine-5-monophosphate dehydrogenase [Pseudovibrio sp. JE062]
gi|374332317|ref|YP_005082501.1| hypothetical protein PSE_3975 [Pseudovibrio sp. FO-BEG1]
gi|211960455|gb|EEA95651.1| inosine-5-monophosphate dehydrogenase [Pseudovibrio sp. JE062]
gi|359345105|gb|AEV38479.1| CBS domain containing protein [Pseudovibrio sp. FO-BEG1]
Length = 143
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 60/105 (57%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+ RR+ A++L D ++ GI++++D+ + ++ PVS+ MT+
Sbjct: 30 LGGRRIGAIVLCDEPGVIVGIVSERDVVQAIAMEGPDVLAQPVSEYMTKEVAVCTEADSV 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
+ +M +G+FRH+PVVE+G++I L+ I + IA++ER A+
Sbjct: 90 NGVMARMTEGRFRHMPVVEDGKLIGLVSIGDIVKFRIAQVEREAD 134
>gi|260428383|ref|ZP_05782362.1| CBS domain protein [Citreicella sp. SE45]
gi|260422875|gb|EEX16126.1| CBS domain protein [Citreicella sp. SE45]
Length = 173
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%)
Query: 4 RRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEA 63
+R+ A+L+TD+ L GIL+++DI R+ V+++MT +P D V
Sbjct: 64 KRIGAILVTDAAGHLVGILSERDIVRRLADTPGRTLPQTVAELMTTDPQTCTLDETLVRV 123
Query: 64 LQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAI 110
L++M G+FRHLPV+E+GE+ ++ I + + +E A K K +
Sbjct: 124 LRRMTDGRFRHLPVLEDGEIAGMISIGDVVNYRLTALEYEALKLKQL 170
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 76/137 (55%), Gaps = 12/137 (8%)
Query: 143 SLSTIIPEKSK-VVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILMRVI 200
++ ++ +K + V TI P +T+ A + + + R+ + +VT GIL+ +DI+ R+
Sbjct: 33 TVGHVMEKKGRDVHTIGPDETIGHAVEVLRDKRIGAILVTDAAGHLVGILSERDIVRRLA 92
Query: 201 ---SQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDV---VD 254
+ LP V ++MT +P+ T+D +V L M DG+F HLPV++ DG++ +
Sbjct: 93 DTPGRTLPQ---TVAELMTTDPQTCTLDETLVRVLRRMTDGRFRHLPVLE-DGEIAGMIS 148
Query: 255 VVDVIHITHAAVATEIL 271
+ DV++ A+ E L
Sbjct: 149 IGDVVNYRLTALEYEAL 165
>gi|428211776|ref|YP_007084920.1| PAS domain-containing protein [Oscillatoria acuminata PCC 6304]
gi|428000157|gb|AFY81000.1| PAS domain S-box [Oscillatoria acuminata PCC 6304]
Length = 2164
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
Query: 145 STIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNL 204
STII ++ + I+P ++L +M + R S A+V + GILT +DI+ R+ +Q++
Sbjct: 15 STIIDQQG--LFIAPGTSLLDLIPRMSQQRASCALVVENERLLGILTERDIV-RITAQSI 71
Query: 205 PADSTLVEKVMTPNP--ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHIT 262
++ LV ++MTPNP C + D I+ L +H + HLP +D G ++ V+ +
Sbjct: 72 ELETVLVREIMTPNPITICLSSDVDILSILSCLHQHQIRHLPALDATGKILGVITQNSLR 131
Query: 263 HAAVATEIL 271
A T++L
Sbjct: 132 AAMKPTDLL 140
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 71/266 (26%), Positives = 121/266 (45%), Gaps = 54/266 (20%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVL--SDT 58
M+ +R L+ ++ LL GILT++DI R+ A+ + LE V ++MT NP + SD
Sbjct: 38 MSQQRASCALVVENERLL-GILTERDI-VRITAQSIELETVLVREIMTPNPITICLSSDV 95
Query: 59 LAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGV 117
+ L + Q + RHLP ++ G+++ ++ RAA K
Sbjct: 96 DILSILSCLHQHQIRHLPALDATGKILGVI---------TQNSLRAAMKPT--------- 137
Query: 118 EKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSS 177
+ L+ + +++T VV SPT ++L TK M R+S
Sbjct: 138 ---------------DLLKLKCVNQAMTT------TVVHASPTISLLEITKMMASHRISC 176
Query: 178 AVVTVENK-----PRGILTSKDIL-MRVISQNLPADSTLVEKVM-TPNPECATIDTPIVD 230
V+T + P GILT +DI+ R ++ +LP ST + VM +P + DT + +
Sbjct: 177 IVITEIREEGSPIPIGILTERDIVQFRALNLDLP--STFAQTVMSSPLLPIQSTDT-LWN 233
Query: 231 ALHIMHDGKFLHLPVVDRDGDVVDVV 256
A M + L V++ G +V ++
Sbjct: 234 AHQQMEIHRIRRLVVINEAGILVGIL 259
>gi|83952657|ref|ZP_00961387.1| CBS domain-containing protein [Roseovarius nubinhibens ISM]
gi|83835792|gb|EAP75091.1| CBS domain-containing protein [Roseovarius nubinhibens ISM]
Length = 144
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A RR+ L++++ + GIL+++DI + R + +MTRNP +
Sbjct: 31 LAERRIGGLVVSEDGKQIQGILSERDIVRSLAVRGATCLSDRIDDMMTRNPVCCARGDTS 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIAR--MERAAEKG 107
+ L +M +G+FRH+PVVE+GE++ ++ I + ++ ME+ A +G
Sbjct: 91 DQVLTRMTEGRFRHMPVVEDGELVGIVTIGDVVSSRLSELAMEKDALQG 139
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVISQNLPADSTLV 211
KV+TI P V A + + E R+ VV+ + K +GIL+ +DI+ + + S +
Sbjct: 14 KVITIKPGTLVSDAARILAERRIGGLVVSEDGKQIQGILSERDIVRSLAVRGATCLSDRI 73
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+ +MT NP C L M +G+F H+PVV+ DG++V +V +
Sbjct: 74 DDMMTRNPVCCARGDTSDQVLTRMTEGRFRHMPVVE-DGELVGIVTI 119
>gi|315427081|dbj|BAJ48697.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
gi|315427113|dbj|BAJ48728.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
gi|343485746|dbj|BAJ51400.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
Length = 140
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
VVT+SPT +V A K M E + S VVTV KP G+LT +D++ RV++ L T VE
Sbjct: 16 VVTVSPTTSVYAAAKIMAEEEVGSLVVTVGEKPVGVLTERDVVRRVVAAGLSPRRTSVED 75
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
VMT +T + +A+ IM + L VV RD +V +V V I A
Sbjct: 76 VMTSPVVVVGENTSLEEAVAIMASNRVRRLLVV-RDEKLVGIVTVTDIVRA 125
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 6/111 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA V +L++T + G+LT++D+ RV+A L+ T V VMT +P V+ + +
Sbjct: 32 MAEEEVGSLVVTVGEKPV-GVLTERDVVRRVVAAGLSPRRTSVEDVMT-SPVVVVGENTS 89
Query: 61 V-EALQKMVQGKFRHLPVVENGEVIALL---DIAKCLYDAIARMERAAEKG 107
+ EA+ M + R L VV + +++ ++ DI + L + A+ A +G
Sbjct: 90 LEEAVAIMASNRVRRLLVVRDEKLVGIVTVTDIVRALGEESAKAAPAILRG 140
>gi|254469544|ref|ZP_05082949.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Pseudovibrio sp. JE062]
gi|211961379|gb|EEA96574.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Pseudovibrio sp. JE062]
Length = 608
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 72/125 (57%), Gaps = 3/125 (2%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
S +T P DTV A ++M + R+SS VT + + GI+T +D+ +V++ LPA+ TLV
Sbjct: 150 SNPLTCRPEDTVKQAAQQMRDARVSSLCVTDDGRLIGIITVRDLSFKVLASELPAE-TLV 208
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITH-AAVATEI 270
E VMT NP D LH+M + + H+P+V+ G +V +V +T A+++
Sbjct: 209 EAVMTANPITLGPAAIGSDLLHLMMERRIGHVPIVE-GGHLVGMVTQTDLTRFQAISSAE 267
Query: 271 LLDQI 275
L+ QI
Sbjct: 268 LVSQI 272
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 5 RVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEAL 64
RV +L +TD L+ GI+T +D++ +V+A EL ET V VMT NP + + + L
Sbjct: 172 RVSSLCVTDDGRLI-GIITVRDLSFKVLASELP-AETLVEAVMTANPITLGPAAIGSDLL 229
Query: 65 QKMVQGKFRHLPVVENGEVIALL 87
M++ + H+P+VE G ++ ++
Sbjct: 230 HLMMERRIGHVPIVEGGHLVGMV 252
>gi|146339430|ref|YP_001204478.1| hypothetical protein BRADO2416 [Bradyrhizobium sp. ORS 278]
gi|146192236|emb|CAL76241.1| conserved hypothetical protein with 2 CBS domains [Bradyrhizobium
sp. ORS 278]
Length = 125
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RV ++L+ D + L+ GI+T D A +V+ L+ ++TPV++VMT NP V D
Sbjct: 9 MRDNRVRSVLVMDDDVLV-GIVTQGDCAIKVLLPGLDAKQTPVAQVMTANPVTVRPDHPL 67
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
+ M Q FRHLPV++ G+V+ ++ I + + I +E +
Sbjct: 68 DGCMAMMAQRGFRHLPVIDAGKVVGVISIGDVVKNIIRDLEHNVD 112
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 163 VLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECA 222
V+ A +KM + R+ S +V ++ GI+T D ++V+ L A T V +VMT NP
Sbjct: 2 VVEALQKMRDNRVRSVLVMDDDVLVGIVTQGDCAIKVLLPGLDAKQTPVAQVMTANPVTV 61
Query: 223 TIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
D P+ + +M F HLPV+D G VV V+ +
Sbjct: 62 RPDHPLDGCMAMMAQRGFRHLPVIDA-GKVVGVISI 96
>gi|254501194|ref|ZP_05113345.1| hypothetical protein SADFL11_1230 [Labrenzia alexandrii DFL-11]
gi|222437265|gb|EEE43944.1| hypothetical protein SADFL11_1230 [Labrenzia alexandrii DFL-11]
Length = 143
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 63/106 (59%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A ++ A++L D + + GI++++D+ V + + PVS +MT++ A
Sbjct: 30 LAKNKIGAVVLCDGDRHIEGIVSERDVVRLVGLQGASALSQPVSSIMTKDVMTCTEMDAA 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEK 106
E + +M +G+FRH+PVVE+G++I ++ I + IA++E AE+
Sbjct: 90 NEVMGRMNRGRFRHMPVVEDGKLIGVISIGDVVKHKIAQVEHEAEQ 135
>gi|319793129|ref|YP_004154769.1| signal transduction protein with cbs domains [Variovorax paradoxus
EPS]
gi|315595592|gb|ADU36658.1| putative signal transduction protein with CBS domains [Variovorax
paradoxus EPS]
Length = 145
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 53/82 (64%), Gaps = 4/82 (4%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPV 77
L GILT++D+ TRV+A+ L+ + TPV +VMT NP V +TL +A+ M++ FRHLP+
Sbjct: 48 LLGILTERDLMTRVLAKGLDPDRTPVREVMTPNPICVPPETLVSDAVVLMLERGFRHLPL 107
Query: 78 VENGEVIALLDIAKCLYDAIAR 99
V +++ + + DA+ R
Sbjct: 108 VAGAKILGVFSV----RDALPR 125
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILMRVISQNLPADST 209
+ VV++ P +V A M S +V + + GILT +D++ RV+++ L D T
Sbjct: 12 RKHVVSLGPQASVRDAACVMTRANCGSVLVMELPDTLLGILTERDLMTRVLAKGLDPDRT 71
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVV 246
V +VMTPNP C +T + DA+ +M + F HLP+V
Sbjct: 72 PVREVMTPNPICVPPETLVSDAVVLMLERGFRHLPLV 108
>gi|383936436|ref|ZP_09989862.1| hypothetical protein RNAN_2966 [Rheinheimera nanhaiensis E407-8]
gi|383702500|dbj|GAB59953.1| hypothetical protein RNAN_2966 [Rheinheimera nanhaiensis E407-8]
Length = 608
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ +RV +LL+ + + L+ GI+TD+D+ RV+A L T +S+VMTR P +
Sbjct: 169 MSEQRVSSLLVEEQDKLV-GIITDRDLRNRVLAHALP-ASTQISQVMTRQPQHIDRHAYL 226
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
EA+Q+M Q HLPV+E+G A+L
Sbjct: 227 YEAVQQMSQHNIHHLPVMEHGVCCAML 253
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 129 NTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRG 188
+ + E + F +S I+ ++ + I P +V A + M E R+SS +V ++K G
Sbjct: 130 HQYREQQQGSRFTLKISDIVQQRK--IAIRPEQSVQDAARLMSEQRVSSLLVEEQDKLVG 187
Query: 189 ILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
I+T +D+ RV++ LPA ST + +VMT P+ + +A+ M HLPV++
Sbjct: 188 IITDRDLRNRVLAHALPA-STQISQVMTRQPQHIDRHAYLYEAVQQMSQHNIHHLPVME 245
>gi|427431006|ref|ZP_18920702.1| putative signal-transduction protein [Caenispirillum salinarum AK4]
gi|425878183|gb|EKV26902.1| putative signal-transduction protein [Caenispirillum salinarum AK4]
Length = 150
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 73/127 (57%), Gaps = 2/127 (1%)
Query: 147 IIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPA 206
IIP + + ++P TV A + M + +++ ++ + + GI+T +DI R +++ +
Sbjct: 8 IIPREQTLSIVAPETTVRTAAELMRDRNIAAVMIVRDERLIGIMTERDIAARAVARGVDP 67
Query: 207 DSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
+T VE++MT +P+ D P + AL +M + + HLPVV +DG V +V + + +A V
Sbjct: 68 QTTRVEEIMTADPDTLEADDPAMTALKMMREHNYRHLPVV-KDGRPVGMVSIRDL-YAVV 125
Query: 267 ATEILLD 273
+E+ D
Sbjct: 126 QSELESD 132
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPV 77
L GI+T++DIA R +AR ++ + T V ++MT +P + +D A+ AL+ M + +RHLPV
Sbjct: 47 LIGIMTERDIAARAVARGVDPQTTRVEEIMTADPDTLEADDPAMTALKMMREHNYRHLPV 106
Query: 78 VENGEVIALLDIAKCLY 94
V++G + ++ I + LY
Sbjct: 107 VKDGRPVGMVSI-RDLY 122
>gi|171057111|ref|YP_001789460.1| signal-transduction protein [Leptothrix cholodnii SP-6]
gi|170774556|gb|ACB32695.1| putative signal-transduction protein with CBS domains [Leptothrix
cholodnii SP-6]
Length = 158
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+T+ L+ GI+T++D A +V + ETPV +MT + FV D +
Sbjct: 44 MAEKGIGALLVTEGEQLV-GIVTERDYARKVALMSRSSRETPVRDIMTADVMFVRPDQTS 102
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
E + M + + RHLPV+ +G+++ L+ I + D I+
Sbjct: 103 SECMALMTENRLRHLPVMADGKLLGLISIGDLVKDIIS 140
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Query: 143 SLSTIIPEKSKVV--TISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVI 200
S++ I+ K + V T +P+ TV A K M E + + +VT + GI+T +D +V
Sbjct: 15 SVADILKSKPQAVVHTTTPSTTVFDAVKLMAEKGIGALLVTEGEQLVGIVTERDYARKVA 74
Query: 201 SQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+ + T V +MT + D + + +M + + HLPV+ DG ++ ++ +
Sbjct: 75 LMSRSSRETPVRDIMTADVMFVRPDQTSSECMALMTENRLRHLPVM-ADGKLLGLISI 131
>gi|254514040|ref|ZP_05126101.1| cyclic nucleotide-binding protein [gamma proteobacterium NOR5-3]
gi|219676283|gb|EED32648.1| cyclic nucleotide-binding protein [gamma proteobacterium NOR5-3]
Length = 621
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
++T+SP TV A + M E R+SS V + GILT +D+ RV++ L + TLV
Sbjct: 165 ILTVSPELTVQQAARAMAERRVSSTFVLEGEELLGILTDRDLRTRVLAAGLN-NQTLVRD 223
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
VMTPNPE + + +M F HLPV++ DG + VV
Sbjct: 224 VMTPNPESISAQESLFATTLLMTQRSFHHLPVLE-DGRLAGVV 265
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA RRV + + + LL GILTD+D+ TRV+A LN +T V VMT NP + +
Sbjct: 181 MAERRVSSTFVLEGEELL-GILTDRDLRTRVLAAGLN-NQTLVRDVMTPNPESISAQESL 238
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
M Q F HLPV+E+G + ++
Sbjct: 239 FATTLLMTQRSFHHLPVLEDGRLAGVV 265
>gi|296109539|ref|YP_003616488.1| signal transduction protein with CBS domains [methanocaldococcus
infernus ME]
gi|295434353|gb|ADG13524.1| putative signal transduction protein with CBS domains
[Methanocaldococcus infernus ME]
Length = 184
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 6/125 (4%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
V T+S DTV A M E + + VV KP GILT +DIL +V+++NL LVE+
Sbjct: 17 VYTVSKKDTVYDAANIMCEKDIGAVVVVENKKPVGILTERDILKKVVAKNLKPKEVLVEE 76
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV---DVIHITHAAVATEI 270
VMT N +T + +A IM LPVV+ + +VV ++ D++ ++ + EI
Sbjct: 77 VMTKNIITIPKNTTLTEAAKIMSKHNVKRLPVVE-NNEVVGIITQDDIVRVSPKII--EI 133
Query: 271 LLDQI 275
L D I
Sbjct: 134 LQDYI 138
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + + A+++ + N GILT++DI +V+A+ L +E V +VMT+N + +T
Sbjct: 33 MCEKDIGAVVVVE-NKKPVGILTERDILKKVVAKNLKPKEVLVEEVMTKNIITIPKNTTL 91
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
EA + M + + LPVVEN EV+ ++
Sbjct: 92 TEAAKIMSKHNVKRLPVVENNEVVGII 118
>gi|297624020|ref|YP_003705454.1| putative signal transduction protein [Truepera radiovictrix DSM
17093]
gi|297165200|gb|ADI14911.1| putative signal transduction protein with CBS domains [Truepera
radiovictrix DSM 17093]
Length = 138
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 8/130 (6%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL 210
+ +VVT +VL A + + + VV KP GILT +DI +RV++ +T
Sbjct: 8 REEVVTTGLRASVLEAAELLRARNVGCLVVVEGGKPCGILTDRDIALRVVAAGRDPKTTA 67
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVV------DVVDVIHITHA 264
VE+VMTP P + + +AL IM D PVVDR G + DV+ +I + +
Sbjct: 68 VEEVMTPRPTVLEEELGLFEALEIMKDRGVRRFPVVDRYGQLSGFFTLDDVLYLIGLELS 127
Query: 265 AVATEILLDQ 274
AVA ++DQ
Sbjct: 128 AVAR--IIDQ 135
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+ AR V L++ + CGILTD+DIA RV+A + + T V +VMT PT + +
Sbjct: 27 LRARNVGCLVVVEGGKP-CGILTDRDIALRVVAAGRDPKTTAVEEVMTPRPTVLEEELGL 85
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLY 94
EAL+ M R PVV+ G++ + LY
Sbjct: 86 FEALEIMKDRGVRRFPVVDRYGQLSGFFTLDDVLY 120
>gi|374576351|ref|ZP_09649447.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM471]
gi|374424672|gb|EHR04205.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM471]
Length = 142
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNP-TFVLSDTL 59
+ +++ A+L+ + + L GIL+++DI + R E PVS+VMTR T +DT+
Sbjct: 30 LGEKKIGAVLVMNQSRLE-GILSERDIVRVIGERGAGALEEPVSQVMTRKVVTCKETDTV 88
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
A E ++ M GKFRHLPVV+NG+V+ L+ I + + E E
Sbjct: 89 A-ELMEMMTTGKFRHLPVVDNGKVVGLISIGDIVKRRVQEYESEQE 133
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 62/112 (55%), Gaps = 13/112 (11%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNL------PA 206
+++++ P + +A K + E ++ + +V +++ GIL+ +DI+ RVI + P
Sbjct: 13 QIMSVEPDAKLAVAVKLLGEKKIGAVLVMNQSRLEGILSERDIV-RVIGERGAGALEEPV 71
Query: 207 DSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+ KV+T C DT + + + +M GKF HLPVVD +G VV ++ +
Sbjct: 72 SQVMTRKVVT----CKETDT-VAELMEMMTTGKFRHLPVVD-NGKVVGLISI 117
>gi|118591263|ref|ZP_01548662.1| hypothetical protein SIAM614_16592 [Stappia aggregata IAM 12614]
gi|118436339|gb|EAV42981.1| hypothetical protein SIAM614_16592 [Stappia aggregata IAM 12614]
Length = 122
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 64/106 (60%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A ++ A++++D + GI++++DI + + ++ +TPVS VMT+ +
Sbjct: 9 LAKHKIGAVVVSDDEGAVNGIVSERDIVRVIGTQGVSALKTPVSSVMTKTVVTCTEENNI 68
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEK 106
E + +M QG+FRH+PV+++G++ ++ I + IA++E AE+
Sbjct: 69 NEVMAQMTQGRFRHMPVLKDGKLTGVISIGDVVKFKIAQVELEAEQ 114
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 183 ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLH 242
E GI++ +DI+ + +Q + A T V VMT T + I + + M G+F H
Sbjct: 23 EGAVNGIVSERDIVRVIGTQGVSALKTPVSSVMTKTVVTCTEENNINEVMAQMTQGRFRH 82
Query: 243 LPVVDRDGDVVDVVDVIHITHAAVATEILLDQIMR 277
+PV+ +DG + V+ + + +A L + MR
Sbjct: 83 MPVL-KDGKLTGVISIGDVVKFKIAQVELEAEQMR 116
>gi|313680932|ref|YP_004058671.1| signal transduction protein with cbs domains [Oceanithermus
profundus DSM 14977]
gi|313153647|gb|ADR37498.1| putative signal transduction protein with CBS domains
[Oceanithermus profundus DSM 14977]
Length = 136
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 6/123 (4%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL 210
++ V+T+ PT TV A M ++ + S VV KP GILT +DI++RV+ L D T
Sbjct: 8 RADVITLPPTATVTDAAALMADMNVGSVVVAEGLKPVGILTDRDIVVRVVRPGLDPDETP 67
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVV------DVVDVIHITHA 264
V +VMTP P + +AL + P+VD +G++V DV+ ++ + +
Sbjct: 68 VFRVMTPEPLVLEEQMSLFEALEEVKHKGVRRYPIVDYEGNLVGIFTLDDVLQLLGLEMS 127
Query: 265 AVA 267
AVA
Sbjct: 128 AVA 130
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 19 CGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV-EALQKMVQGKFRHLPV 77
GILTD+DI RV+ L+ +ETPV +VMT P VL + +++ EAL+++ R P+
Sbjct: 44 VGILTDRDIVVRVVRPGLDPDETPVFRVMTPEP-LVLEEQMSLFEALEEVKHKGVRRYPI 102
Query: 78 VE-NGEVIALLDIAKCL 93
V+ G ++ + + L
Sbjct: 103 VDYEGNLVGIFTLDDVL 119
>gi|386816057|ref|ZP_10103275.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Thiothrix nivea DSM 5205]
gi|386420633|gb|EIJ34468.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Thiothrix nivea DSM 5205]
Length = 623
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 10 LLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQ 69
++T+++ LCGI+TD D RV+A N+EE PVS +MT P + A EAL M +
Sbjct: 186 MVTEADGSLCGIVTDVDFRKRVVAEGRNVEE-PVSGIMTPKPLTLTPRDQASEALLLMAR 244
Query: 70 GKFRHLPVVENGEVIALL 87
RHLPVVEN +V+ ++
Sbjct: 245 RNIRHLPVVENADVVGVV 262
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 3/117 (2%)
Query: 157 ISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILMRVISQNLPADSTLVEKVM 215
+ D++ +M E +A+VT + GI+T D RV+++ + V +M
Sbjct: 164 VGKDDSIRQVACQMNEFNAQTAMVTEADGSLCGIVTDVDFRKRVVAEGRNVEEP-VSGIM 222
Query: 216 TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILL 272
TP P T +AL +M HLPVV+ + DVV VV + + I L
Sbjct: 223 TPKPLTLTPRDQASEALLLMARRNIRHLPVVE-NADVVGVVSATDLLRSQSHNAIYL 278
>gi|298291998|ref|YP_003693937.1| signal transduction protein with CBS domains [Starkeya novella DSM
506]
gi|296928509|gb|ADH89318.1| putative signal transduction protein with CBS domains [Starkeya
novella DSM 506]
Length = 143
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLE-ETPVSKVMTRNPTFVLSDTL 59
+A +R+ A+++TD + GI++++D+ RVI + + PVS VMT +
Sbjct: 30 LATKRIGAIVVTDPERRVVGIISERDVV-RVIGNDGPARLDDPVSSVMTSKVVTCDGNET 88
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEK 106
+ ++ M G+FRHLPVV++G+++ ++ I + +A MER + +
Sbjct: 89 VHQIMESMTAGRFRHLPVVQDGKLVGIISIGDVVKHRVAEMERESHQ 135
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 143 SLSTIIPEKS-KVVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILMRVI 200
++ +I+ EK +V TI P T+ A + R+ + VVT E + GI++ +D++ RVI
Sbjct: 2 TVRSILDEKGHEVQTIGPEATLREAATLLATKRIGAIVVTDPERRVVGIISERDVV-RVI 60
Query: 201 SQNLPAD-STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVI 259
+ PA V VMT + + + M G+F HLPVV +DG +V ++ +
Sbjct: 61 GNDGPARLDDPVSSVMTSKVVTCDGNETVHQIMESMTAGRFRHLPVV-QDGKLVGIISIG 119
Query: 260 HITHAAVA 267
+ VA
Sbjct: 120 DVVKHRVA 127
>gi|374293104|ref|YP_005040139.1| hypothetical protein AZOLI_2737 [Azospirillum lipoferum 4B]
gi|357425043|emb|CBS87924.1| conserved protein of unknown function; CBS domain [Azospirillum
lipoferum 4B]
Length = 160
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + A+L+ D AL+ GI+T++D+ +V++++L+ V VMTRNP + D A
Sbjct: 55 MADKNIGAVLVVDHGALI-GIVTERDLNNKVLSKDLDPSAVEVGAVMTRNPDSLPPDADA 113
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARM--ERA 103
V+AL+ M +RHLP+ + + ++ I A M ERA
Sbjct: 114 VDALKLMHDKHYRHLPITQGKRAVGIVSIRDLFKVAYEHMMAERA 158
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Query: 147 IIPE--KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPR-GILTSKDILMRVISQN 203
++P+ K++ + + P DT + KM+ + AV+ V++ GI+T +D+ +V+S++
Sbjct: 29 LVPDVVKAQELILVPEDTSVATVSKMMADKNIGAVLVVDHGALIGIVTERDLNNKVLSKD 88
Query: 204 LPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPV 245
L + V VMT NP+ D VDAL +MHD + HLP+
Sbjct: 89 LDPSAVEVGAVMTRNPDSLPPDADAVDALKLMHDKHYRHLPI 130
>gi|395220025|ref|ZP_10402617.1| signal transduction protein with CBS domains [Pontibacter sp.
BAB1700]
gi|394453756|gb|EJF08577.1| signal transduction protein with CBS domains [Pontibacter sp.
BAB1700]
Length = 145
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + V AL++ D N G+ T++D A +VI + +T V ++M+ +P V DT
Sbjct: 31 MVEQNVGALIVMD-NGKFAGMFTERDYARKVILKGKASRDTLVQEIMSEHPVTVTPDTTL 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL---DIAKCLYD 95
+ ++ M Q RHLPV +N E+I L+ DI KC+ D
Sbjct: 90 EQCMKLMTQKYIRHLPVFDNQELIGLVSIGDIVKCMMD 127
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
+KV++++PT TV A + M+E + + +V K G+ T +D +VI + + TLV
Sbjct: 13 NKVISVAPTSTVYSALETMVEQNVGALIVMDNGKFAGMFTERDYARKVILKGKASRDTLV 72
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
+++M+ +P T DT + + +M HLPV D
Sbjct: 73 QEIMSEHPVTVTPDTTLEQCMKLMTQKYIRHLPVFD 108
>gi|417859832|ref|ZP_12504888.1| hypothetical protein Agau_C200900 [Agrobacterium tumefaciens F2]
gi|338822896|gb|EGP56864.1| hypothetical protein Agau_C200900 [Agrobacterium tumefaciens F2]
Length = 144
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 60/113 (53%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+ A ++ AL++TD++ ++ GI T++D+ V + + VS MTRN ++
Sbjct: 32 LHAHKIGALVVTDADGVVLGIFTERDLVKAVAGQGAASLQQLVSVAMTRNVIRCHHNSTT 91
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113
E ++ M G+FRH+PV ENG + ++ I + I +E AE KA A
Sbjct: 92 DELMEIMTGGRFRHIPVEENGRLAGIISIGDVVKARIGEIELEAEHIKAYIAG 144
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 14/133 (10%)
Query: 130 TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRG 188
TF++ L +R R VVT+ P T+ A + ++ + VVT + G
Sbjct: 3 TFVKDLLDRKGRD-----------VVTVGPGVTIGEAAGTLHAHKIGALVVTDADGVVLG 51
Query: 189 ILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD- 247
I T +D++ V Q + LV MT N ++ + + IM G+F H+PV +
Sbjct: 52 IFTERDLVKAVAGQGAASLQQLVSVAMTRNVIRCHHNSTTDELMEIMTGGRFRHIPVEEN 111
Query: 248 -RDGDVVDVVDVI 259
R ++ + DV+
Sbjct: 112 GRLAGIISIGDVV 124
>gi|71908483|ref|YP_286070.1| CBS [Dechloromonas aromatica RCB]
gi|71848104|gb|AAZ47600.1| CBS protein [Dechloromonas aromatica RCB]
Length = 146
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 57/97 (58%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+VT S T +V A + M + ++ + +V + GI T +D L +++S L D+T +++
Sbjct: 15 LVTASKTMSVRSACRLMTDKKIGALLVVENGRIAGIFTERDALNKILSAALDPDATTLDQ 74
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG 250
VM +P+ D P+ AL++M +G F H+PVVD G
Sbjct: 75 VMVRDPQTIGADKPLSYALYMMAEGGFRHVPVVDPSG 111
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +++ ALL+ + N + GI T++D ++++ L+ + T + +VM R+P + +D
Sbjct: 31 MTDKKIGALLVVE-NGRIAGIFTERDALNKILSAALDPDATTLDQVMVRDPQTIGADKPL 89
Query: 61 VEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMER 102
AL M +G FRH+PVV+ +G + ++ L + +ER
Sbjct: 90 SYALYMMAEGGFRHVPVVDPSGAPLGMVSARDALGQDMVDLER 132
>gi|429729721|ref|ZP_19264378.1| CBS domain protein [Corynebacterium durum F0235]
gi|429149115|gb|EKX92105.1| CBS domain protein [Corynebacterium durum F0235]
Length = 618
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 5/96 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M R V +LL++ L GI+TD+D+ RV+A +++ PV+++MT NP V SD+LA
Sbjct: 177 MEDRNVSSLLVSQDGGL-EGIVTDRDMRGRVVANNMDVT-LPVTEIMTPNPRAVTSDSLA 234
Query: 61 VEALQKMVQGKFRHLPVVENGEV---IALLDIAKCL 93
EA+ M + HLPVV+ G V IA DI + L
Sbjct: 235 FEAMLIMADMRIHHLPVVDEGAVTGIIASADIMRLL 270
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL-VEK 213
T++P T+ A + M + +SS +V+ + GI+T +D+ RV++ N+ D TL V +
Sbjct: 162 ATVTPDTTIQDAARIMEDRNVSSLLVSQDGGLEGIVTDRDMRGRVVANNM--DVTLPVTE 219
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
+MTPNP T D+ +A+ IM D + HLPVVD +G V ++
Sbjct: 220 IMTPNPRAVTSDSLAFEAMLIMADMRIHHLPVVD-EGAVTGII 261
>gi|407798046|ref|ZP_11144959.1| CBS domain protein [Oceaniovalibus guishaninsula JLT2003]
gi|407059883|gb|EKE45806.1| CBS domain protein [Oceaniovalibus guishaninsula JLT2003]
Length = 142
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
++ +R+ A+++ D + GIL+++DI + R + + PV +MTR+P
Sbjct: 30 LSEKRIGAVIVADGDKP-AGILSERDIVRELGRRGTSCLDDPVDALMTRDPVACTPQDRT 88
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIAR--MERAAEKG 107
L++M +G+FRH+PV+E+G ++ L+ I + +A+ MER A +G
Sbjct: 89 DAVLERMTEGRFRHMPVIEDGRMVGLISIGDVVKARLAQLAMERDALEG 137
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Query: 143 SLSTIIPEKSK-VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVIS 201
+ I+ +K +VT++P V A + + E R+ + +V +KP GIL+ +DI+ +
Sbjct: 2 QMHQILKDKGGDIVTVAPGSKVSEAARLLSEKRIGAVIVADGDKPAGILSERDIVRELGR 61
Query: 202 QNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHI 261
+ V+ +MT +P T L M +G+F H+PV++ DG +V ++ + +
Sbjct: 62 RGTSCLDDPVDALMTRDPVACTPQDRTDAVLERMTEGRFRHMPVIE-DGRMVGLISIGDV 120
Query: 262 THAAVA 267
A +A
Sbjct: 121 VKARLA 126
>gi|398809835|ref|ZP_10568676.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Variovorax sp. CF313]
gi|398084927|gb|EJL75598.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Variovorax sp. CF313]
Length = 145
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 57/94 (60%), Gaps = 9/94 (9%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPV 77
L GILT++D+ TRV+AR L+ + T V +VMT NP V +TL +A+ M++ FRHLP+
Sbjct: 48 LLGILTERDLMTRVLARGLDPDHTAVREVMTPNPICVPPETLVSDAVVLMLERGFRHLPL 107
Query: 78 VENGEVIALLDIAKCLYDAIARMERAAEKGKAIA 111
V +V+ + + DA+ R E G A++
Sbjct: 108 VAGAKVLGVFSV----RDALPR-----EIGAAVS 132
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPR---GILTSKDILMRVISQNLPAD 207
++ VV++ P +V A M R S V V P GILT +D++ RV+++ L D
Sbjct: 12 RAHVVSLGPQASVRDAACVMT--RASCGSVLVMELPDTLLGILTERDLMTRVLARGLDPD 69
Query: 208 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVV 246
T V +VMTPNP C +T + DA+ +M + F HLP+V
Sbjct: 70 HTAVREVMTPNPICVPPETLVSDAVVLMLERGFRHLPLV 108
>gi|326801888|ref|YP_004319707.1| signal transduction protein with CBS domains [Sphingobacterium sp.
21]
gi|326552652|gb|ADZ81037.1| putative signal transduction protein with CBS domains
[Sphingobacterium sp. 21]
Length = 142
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + + ALL+ D LL GI T++D A ++I + T + +VMT NP V +
Sbjct: 31 MMEKNISALLVVDQGVLL-GIFTERDYARKIILKGRASANTAIHEVMTSNPHTVGPNHSI 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIA 90
+Q M FRHLP+VENG +I ++ I
Sbjct: 90 DHCMQLMTDRHFRHLPIVENGNLIGIISIG 119
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 68/117 (58%), Gaps = 2/117 (1%)
Query: 143 SLSTIIPEKSK-VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVIS 201
++ I+ K+K +V++SP D+VL A + M+E +S+ +V + GI T +D ++I
Sbjct: 3 TVKYILENKAKSIVSVSPNDSVLGALRIMMEKNISALLVVDQGVLLGIFTERDYARKIIL 62
Query: 202 QNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+ + +T + +VMT NP + I + +M D F HLP+V+ +G+++ ++ +
Sbjct: 63 KGRASANTAIHEVMTSNPHTVGPNHSIDHCMQLMTDRHFRHLPIVE-NGNLIGIISI 118
>gi|220922102|ref|YP_002497403.1| putative signal transduction protein with CBS domains
[Methylobacterium nodulans ORS 2060]
gi|219946708|gb|ACL57100.1| putative signal transduction protein with CBS domains
[Methylobacterium nodulans ORS 2060]
Length = 148
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 6 VDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQ 65
V AL++ + L+ GI++++D+ATRVIA + T V +VMTR+P + ++ EA +
Sbjct: 36 VGALVVLEERRLV-GIISERDVATRVIAGHRDPMLTLVREVMTRDPETIAAEASLAEAYR 94
Query: 66 KMVQGKFRHLPVVENGEVIALLDIA 90
+M+ G FRHLPV+ EVI ++ +
Sbjct: 95 RMLTGGFRHLPVMRGQEVIGMISLC 119
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 156 TISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVM 215
+++ TV ++ E + + VV E + GI++ +D+ RVI+ + TLV +VM
Sbjct: 17 SVTGNFTVARVCLRLREYGVGALVVLEERRLVGIISERDVATRVIAGHRDPMLTLVREVM 76
Query: 216 TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHI 261
T +PE + + +A M G F HLPV+ R +V+ ++ + I
Sbjct: 77 TRDPETIAAEASLAEAYRRMLTGGFRHLPVM-RGQEVIGMISLCDI 121
>gi|209516332|ref|ZP_03265189.1| CBS domain containing protein [Burkholderia sp. H160]
gi|209503268|gb|EEA03267.1| CBS domain containing protein [Burkholderia sp. H160]
Length = 147
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + AL++TD +++ GI+T++D A +++ + + + TPV +M++ FV D
Sbjct: 33 MAEKGIGALVVTDGDSI-AGIVTERDYARKIVLMDRSSKATPVRDIMSKAVRFVRPDQTT 91
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
E + M + + RHLPV++N +I ++ I + D IA +
Sbjct: 92 EECMALMTERRMRHLPVIQNDRLIGMVSIGDLVKDIIAEQQ 132
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 48/101 (47%)
Query: 149 PEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADS 208
P S V TI D+V A + M E + + VVT + GI+T +D +++ + + +
Sbjct: 12 PNSSDVYTIGADDSVYEAIRLMAEKGIGALVVTDGDSIAGIVTERDYARKIVLMDRSSKA 71
Query: 209 TLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
T V +M+ D + + +M + + HLPV+ D
Sbjct: 72 TPVRDIMSKAVRFVRPDQTTEECMALMTERRMRHLPVIQND 112
>gi|379056761|ref|ZP_09847287.1| CBS domain and cyclic nucleotide-regulated nucleotidyltransferase
[Serinicoccus profundi MCCC 1A05965]
Length = 617
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Query: 6 VDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQ 65
V +LL+ + +AL+ GI+TD+D+ RV+A L +TPV +VMTR+P + + LA+EA+
Sbjct: 185 VSSLLVMEGDALV-GIVTDRDLRRRVLAAGLA-ADTPVGEVMTRDPVTLPARALALEAML 242
Query: 66 KMVQGKFRHLPVVENGEVIALL 87
+M HLPV+E+G V+ L+
Sbjct: 243 EMTGRNIHHLPVLEDGRVLGLV 264
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL 210
+ + V ++P+ TV + M +SS +V + GI+T +D+ RV++ L AD T
Sbjct: 161 RGEPVVVTPSATVAEGARVMTRAGVSSLLVMEGDALVGIVTDRDLRRRVLAAGLAAD-TP 219
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
V +VMT +P ++A+ M HLPV++ DG V+ +V
Sbjct: 220 VGEVMTRDPVTLPARALALEAMLEMTGRNIHHLPVLE-DGRVLGLV 264
>gi|237654199|ref|YP_002890513.1| signal transduction protein with CBS domains [Thauera sp. MZ1T]
gi|237625446|gb|ACR02136.1| putative signal transduction protein with CBS domains [Thauera sp.
MZ1T]
Length = 140
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M R V A+L+TD+ A L GI T +D A +VIA + + +S+VMT P + + A
Sbjct: 31 MCERSVGAVLVTDARAHLKGIFTGRD-AVQVIANGGDPAKVQLSEVMTAKPDTIDPEHKA 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
++AL M G +RHLPVV +G+V+ ++
Sbjct: 90 IDALHMMCDGGYRHLPVVVDGKVVGIV 116
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILM 197
M ++S I+ +++ ++ + PTDTV A + M E + + +VT +GI T +D +
Sbjct: 1 MTNRNISFIVKDQNPLM-LRPTDTVQTACRSMCERSVGAVLVTDARAHLKGIFTGRDAVQ 59
Query: 198 RVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
+ + PA L E VMT P+ + +DALH+M DG + HLPVV DG VV +V
Sbjct: 60 VIANGGDPAKVQLSE-VMTAKPDTIDPEHKAIDALHMMCDGGYRHLPVV-VDGKVVGIV 116
>gi|451944038|ref|YP_007464674.1| signal transduction protein [Corynebacterium halotolerans YIM 70093
= DSM 44683]
gi|451903425|gb|AGF72312.1| signal transduction protein [Corynebacterium halotolerans YIM 70093
= DSM 44683]
Length = 617
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M V +LL+ + L GI+TD+D+ RV+A L ++ PVS++MT +P V SD+LA
Sbjct: 177 MEESNVSSLLIIEDGGL-RGIVTDRDLRGRVVATGLGID-LPVSEIMTPDPRTVSSDSLA 234
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCL 93
EA+ M + HLP+V++GEV ++ A +
Sbjct: 235 FEAMLFMAELSIHHLPIVDDGEVTGIVTTADIM 267
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Query: 148 IPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPAD 207
IPE SP ++ A + M E +SS ++ + RGI+T +D+ RV++ L D
Sbjct: 158 IPEPKGT---SPRTSIRDAARMMEESNVSSLLIIEDGGLRGIVTDRDLRGRVVATGLGID 214
Query: 208 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
V ++MTP+P + D+ +A+ M + HLP+VD DG+V +V
Sbjct: 215 LP-VSEIMTPDPRTVSSDSLAFEAMLFMAELSIHHLPIVD-DGEVTGIV 261
>gi|398825173|ref|ZP_10583477.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Bradyrhizobium sp. YR681]
gi|398224117|gb|EJN10438.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Bradyrhizobium sp. YR681]
Length = 142
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNP-TFVLSDTL 59
+ +++ A+L+ + + L GIL+++DI + AR E PVS+VMTR T +DT+
Sbjct: 30 LGEKKIGAVLVMNQSRLE-GILSERDIVRVIGARGAAALEEPVSEVMTRKVVTCKETDTV 88
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
A E ++ M GKFRHLPV++NG+V+ L+ I + + E E
Sbjct: 89 A-ELMEMMTTGKFRHLPVLDNGKVVGLISIGDIVKRRVQEYESEQE 133
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
+++++ P + A K + E ++ + +V +++ GIL+ +DI+ + ++ A V
Sbjct: 13 QIMSVEPDAKLAAAVKLLGEKKIGAVLVMNQSRLEGILSERDIVRVIGARGAAALEEPVS 72
Query: 213 KVMTPNP-ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+VMT C DT + + + +M GKF HLPV+D +G VV ++ +
Sbjct: 73 EVMTRKVVTCKETDT-VAELMEMMTTGKFRHLPVLD-NGKVVGLISI 117
>gi|365880312|ref|ZP_09419688.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
gi|365291678|emb|CCD92219.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
Length = 125
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RV ++L+ D + +L GI+T D A +V+ L+ +ETPVS+VMT NP V D
Sbjct: 9 MRDSRVRSVLVID-DGVLVGIVTQGDCAIKVLLPGLDAKETPVSQVMTANPVTVRPDHRL 67
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
+ M Q FRHLPV++ +V+ ++ I + + I +E +
Sbjct: 68 DSCMAMMSQRGFRHLPVLDADKVVGVISIGDVVKNIIRDLEHNVD 112
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%)
Query: 163 VLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECA 222
V+ A +KM + R+ S +V + GI+T D ++V+ L A T V +VMT NP
Sbjct: 2 VVEALQKMRDSRVRSVLVIDDGVLVGIVTQGDCAIKVLLPGLDAKETPVSQVMTANPVTV 61
Query: 223 TIDTPIVDALHIMHDGKFLHLPVVDRD 249
D + + +M F HLPV+D D
Sbjct: 62 RPDHRLDSCMAMMSQRGFRHLPVLDAD 88
>gi|319790200|ref|YP_004151833.1| putative signal transduction protein with CBS domains [Thermovibrio
ammonificans HB-1]
gi|317114702|gb|ADU97192.1| putative signal transduction protein with CBS domains [Thermovibrio
ammonificans HB-1]
Length = 134
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL 210
+ KVV I P DTV +A ++M + + S VV ++P GI+T +D+ +RVI + LP D T
Sbjct: 8 RRKVVVIEPDDTVKLAAQRMEDKMVGSLVVIEGDRPVGIITDRDLALRVIGRELPPD-TP 66
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+++VMT +P D + + L VVD+DG +V ++ +
Sbjct: 67 IKEVMTRDPITIREDASFFELTKTFREAAVRRLIVVDKDGKLVGLISI 114
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 19 CGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVV 78
GI+TD+D+A RVI REL +TP+ +VMTR+P + D E + + R L VV
Sbjct: 44 VGIITDRDLALRVIGRELP-PDTPIKEVMTRDPITIREDASFFELTKTFREAAVRRLIVV 102
Query: 79 E-NGEVIALLDI 89
+ +G+++ L+ I
Sbjct: 103 DKDGKLVGLISI 114
>gi|126734515|ref|ZP_01750261.1| nucleotidyltransferase, putative [Roseobacter sp. CCS2]
gi|126715070|gb|EBA11935.1| nucleotidyltransferase, putative [Roseobacter sp. CCS2]
Length = 608
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKV 214
VT +PT T+ A KKM + R+S V + K GILT +D+ + ++Q LP + T V +
Sbjct: 154 VTCAPTMTIQDAAKKMQDKRISCLCVVAKKKLTGILTVRDLSGKALAQGLPPN-TPVSDI 212
Query: 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHIT 262
MTP+P + D LH+M + + HLP+V+ G +V +V +T
Sbjct: 213 MTPDPRVLSPSAIGSDVLHMMMEYRLGHLPIVEA-GKLVGIVTQTDLT 259
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +R+ L + + L GILT +D++ + +A+ L TPVS +MT +P + +
Sbjct: 169 MQDKRISCLCVV-AKKKLTGILTVRDLSGKALAQGLP-PNTPVSDIMTPDPRVLSPSAIG 226
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
+ L M++ + HLP+VE G+++ ++
Sbjct: 227 SDVLHMMMEYRLGHLPIVEAGKLVGIV 253
>gi|367474661|ref|ZP_09474156.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
gi|365273035|emb|CCD86624.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
Length = 125
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RV ++L+ D AL+ GI+T D A +V+ L+ +ETPV++VMT NP V D
Sbjct: 9 MRDNRVRSVLVVDDGALV-GIITQGDCAIKVLLPGLDAKETPVAQVMTANPVTVRPDHGL 67
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
+ M Q FRHLPV+ +V+ ++ I + + I +E +
Sbjct: 68 DSCMAMMSQRGFRHLPVLNADKVVGVISIGDVVKNIIRDLEHNVD 112
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%)
Query: 163 VLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECA 222
V+ A ++M + R+ S +V + GI+T D ++V+ L A T V +VMT NP
Sbjct: 2 VVEALRQMRDNRVRSVLVVDDGALVGIITQGDCAIKVLLPGLDAKETPVAQVMTANPVTV 61
Query: 223 TIDTPIVDALHIMHDGKFLHLPVVDRD 249
D + + +M F HLPV++ D
Sbjct: 62 RPDHGLDSCMAMMSQRGFRHLPVLNAD 88
>gi|158425292|ref|YP_001526584.1| hypothetical protein AZC_3668 [Azorhizobium caulinodans ORS 571]
gi|158332181|dbj|BAF89666.1| hypothetical protein AZC_3668 [Azorhizobium caulinodans ORS 571]
Length = 143
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 56/106 (52%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
++ R+ A++ D N L GIL+++D+ + R + PVS VMTR D
Sbjct: 30 LSEHRIGAIVAVDDNGRLAGILSERDVVRILGVRGPEVLSEPVSAVMTRAVVTCARDETI 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEK 106
+++M +G+FRH+PVVE +I ++ I + + MER + +
Sbjct: 90 QGIMERMTRGRFRHVPVVEGERLIGIISIGDVVKFRVEEMERESAQ 135
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 14/123 (11%)
Query: 143 SLSTIIPEK-SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPR--GILTSKDILMRV 199
++S I+ K S +VTISP ++ A K + E R+ A+V V++ R GIL+ +D++ R+
Sbjct: 2 TVSAILNSKPSSMVTISPDASLTDAVKSLSEHRIG-AIVAVDDNGRLAGILSERDVV-RI 59
Query: 200 ISQNLP-ADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD--------G 250
+ P S V VMT D I + M G+F H+PVV+ + G
Sbjct: 60 LGVRGPEVLSEPVSAVMTRAVVTCARDETIQGIMERMTRGRFRHVPVVEGERLIGIISIG 119
Query: 251 DVV 253
DVV
Sbjct: 120 DVV 122
>gi|383770962|ref|YP_005450025.1| hypothetical protein S23_27010 [Bradyrhizobium sp. S23321]
gi|381359083|dbj|BAL75913.1| hypothetical protein S23_27010 [Bradyrhizobium sp. S23321]
Length = 142
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNP-TFVLSDTL 59
+ +++ A+L+ + + L GIL+++DI + R + PVS+VMTR T +DT+
Sbjct: 30 LGEKKIGAVLVMNQSRLE-GILSERDIVRVIGERGAGALDEPVSEVMTRKVVTCKEADTV 88
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
A E ++ M +GKFRHLPV++NG+V+ L+ I + + E E
Sbjct: 89 A-ELMEMMTEGKFRHLPVIDNGKVVGLISIGDIVKRRVQEYESEQE 133
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 63/112 (56%), Gaps = 13/112 (11%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQ------NLPA 206
+++++ P + A K + E ++ + +V +++ GIL+ +DI+ RVI + + P
Sbjct: 13 QIMSVEPGAKLAAAVKLLGEKKIGAVLVMNQSRLEGILSERDIV-RVIGERGAGALDEPV 71
Query: 207 DSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+ KV+T C DT + + + +M +GKF HLPV+D +G VV ++ +
Sbjct: 72 SEVMTRKVVT----CKEADT-VAELMEMMTEGKFRHLPVID-NGKVVGLISI 117
>gi|152994733|ref|YP_001339568.1| hypothetical protein Mmwyl1_0699 [Marinomonas sp. MWYL1]
gi|150835657|gb|ABR69633.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Marinomonas sp. MWYL1]
Length = 625
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
+++ SP ++V +M E R+SS +V + K GI+T +D+ R+++ ADS LV+
Sbjct: 163 QLIQASPEESVQTIAIRMTEARVSSILVVEDKKLSGIVTDRDLRSRILALGGSADS-LVK 221
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIH-ITHAAVATEIL 271
VMT +P D ++ A +M + HLP+VD + V ++ + H ++ +L
Sbjct: 222 DVMTRDPVSLRPDALVMQAQTLMSESNIHHLPIVDEEQRAVGMLTAADLLRHQELSPLLL 281
Query: 272 LDQIMRQQA 280
++QI RQQ+
Sbjct: 282 INQIHRQQS 290
Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RV ++L+ + L GI+TD+D+ +R++A ++ V VMTR+P + D L
Sbjct: 180 MTEARVSSILVVEDKKL-SGIVTDRDLRSRILALG-GSADSLVKDVMTRDPVSLRPDALV 237
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCL 93
++A M + HLP+V E + +L A L
Sbjct: 238 MQAQTLMSESNIHHLPIVDEEQRAVGMLTAADLL 271
>gi|418245286|ref|ZP_12871693.1| hypothetical protein KIQ_07257 [Corynebacterium glutamicum ATCC
14067]
gi|354510694|gb|EHE83616.1| hypothetical protein KIQ_07257 [Corynebacterium glutamicum ATCC
14067]
Length = 622
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 64/103 (62%), Gaps = 4/103 (3%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL-VEK 213
++ SP T++ A KM E +SS +V ++ + +GI+T +D+ RV++++L D L V +
Sbjct: 166 ISCSPDTTIMDAAIKMDEFGVSSLLVQIDGELKGIITDRDMRSRVVAKDL--DIQLPVSE 223
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
VMT +P CAT +A+ +M + + HLP+VD DG + +V
Sbjct: 224 VMTVDPRCATSQGLAFEAMLLMSELRIHHLPIVD-DGQISGIV 265
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 10 LLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQ 69
LL + L GI+TD+D+ +RV+A++L+++ PVS+VMT +P S LA EA+ M +
Sbjct: 189 LLVQIDGELKGIITDRDMRSRVVAKDLDIQ-LPVSEVMTVDPRCATSQGLAFEAMLLMSE 247
Query: 70 GKFRHLPVVENGEVIALLDIAKCL 93
+ HLP+V++G++ ++ A +
Sbjct: 248 LRIHHLPIVDDGQISGIVTAADIM 271
>gi|384920912|ref|ZP_10020909.1| CBS domain-containing protein [Citreicella sp. 357]
gi|384465251|gb|EIE49799.1| CBS domain-containing protein [Citreicella sp. 357]
Length = 172
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 62/112 (55%), Gaps = 14/112 (12%)
Query: 6 VDALLLTDSNALLCGILTDKDIATRVIARELNLEETP-------VSKVMTRNPTFVLSDT 58
+ A+++ D+ + L GIL+++DI R L +TP V+++MTRN D
Sbjct: 65 IGAVMVLDAQSSLVGILSERDIVRR-------LADTPGQTLPQTVAELMTRNVETCTLDD 117
Query: 59 LAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAI 110
L V L++M G+FRH+PV+ENG VI L+ + + + +E A + K +
Sbjct: 118 LLVSVLRRMTDGRFRHMPVMENGAVIGLISVRDVVRYRLTALEYEALQLKQL 169
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 12/133 (9%)
Query: 147 IIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPR--GILTSKDILMRVI---S 201
+I +K + V + D + ++L AV+ ++ + GIL+ +DI+ R+
Sbjct: 36 LIDQKGRAVFSTSADETIGTVVRLLRDNDIGAVMVLDAQSSLVGILSERDIVRRLADTPG 95
Query: 202 QNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV---DV 258
Q LP V ++MT N E T+D +V L M DG+F H+PV++ +G V+ ++ DV
Sbjct: 96 QTLPQ---TVAELMTRNVETCTLDDLLVSVLRRMTDGRFRHMPVME-NGAVIGLISVRDV 151
Query: 259 IHITHAAVATEIL 271
+ A+ E L
Sbjct: 152 VRYRLTALEYEAL 164
>gi|66803685|ref|XP_635678.1| hypothetical protein DDB_G0290595 [Dictyostelium discoideum AX4]
gi|60463995|gb|EAL62158.1| hypothetical protein DDB_G0290595 [Dictyostelium discoideum AX4]
Length = 228
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ++V A ++ D N +CGI +++D ++V R L+ +ET V V T+ V SD+ A
Sbjct: 115 MNDKKVGATIVVDRNNRMCGIFSERDYLSKVDLRGLSPKETLVKDVCTKQIITVSSDSGA 174
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIA 90
+ L M + RHLPV+EN ++ +L I
Sbjct: 175 TKCLSIMSKRNIRHLPVIENKRLLGMLSIG 204
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 72/179 (40%), Gaps = 32/179 (17%)
Query: 106 KGKAIAAAVEGVEKHWGTSISGPNTFIETLR--ERMFRPSLST------------IIPEK 151
KG+ I W +S PN+ IE +R SL T II EK
Sbjct: 36 KGQNINYTTNN---KWDKKLSVPNS-IEVIRINNNAIGESLHTKLKSYKDTQVGAIIEEK 91
Query: 152 -----SKVVTISPTDTVLMATKKMLELRLSSA-VVTVENKPRGILTSKDILMRVISQNLP 205
++V + +TV A K M + ++ + VV N+ GI + +D L +V + L
Sbjct: 92 IRNNLGRMVKVGENETVYNAIKVMNDKKVGATIVVDRNNRMCGIFSERDYLSKVDLRGLS 151
Query: 206 ADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD--------GDVVDVV 256
TLV+ V T + D+ L IM HLPV++ GD+V +
Sbjct: 152 PKETLVKDVCTKQIITVSSDSGATKCLSIMSKRNIRHLPVIENKRLLGMLSIGDIVKYI 210
>gi|19552508|ref|NP_600510.1| signal-transduction protein [Corynebacterium glutamicum ATCC 13032]
gi|62390174|ref|YP_225576.1| signal transduction protein [Corynebacterium glutamicum ATCC 13032]
gi|21324056|dbj|BAB98681.1| Predicted signal-transduction protein containing cAMP-binding and
CBS domains [Corynebacterium glutamicum ATCC 13032]
gi|41325510|emb|CAF19990.1| Predicted signal-transduction protein containing cAMP-binding and
CBS domain [Corynebacterium glutamicum ATCC 13032]
gi|385143420|emb|CCH24459.1| predicted signal-transduction protein [Corynebacterium glutamicum
K051]
Length = 622
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 64/103 (62%), Gaps = 4/103 (3%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL-VEK 213
++ SP T++ A KM E +SS +V ++ + +GI+T +D+ RV++++L D L V +
Sbjct: 166 ISCSPDTTIMDAAIKMDEFGVSSLLVQIDGELKGIITDRDMRSRVVAKDL--DIQLPVSE 223
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
VMT +P CAT +A+ +M + + HLP+VD DG + +V
Sbjct: 224 VMTVDPRCATSQGLAFEAMLLMSELRIHHLPIVD-DGQISGIV 265
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 10 LLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQ 69
LL + L GI+TD+D+ +RV+A++L+++ PVS+VMT +P S LA EA+ M +
Sbjct: 189 LLVQIDGELKGIITDRDMRSRVVAKDLDIQ-LPVSEVMTVDPRCATSQGLAFEAMLLMSE 247
Query: 70 GKFRHLPVVENGEVIALLDIAKCL 93
+ HLP+V++G++ ++ A +
Sbjct: 248 LRIHHLPIVDDGQISGIVTAADIM 271
>gi|456357013|dbj|BAM91458.1| hypothetical protein S58_54810 [Agromonas oligotrophica S58]
Length = 147
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RV ++L+ D + +L GI+T D A +V+ L+ ++TPV +VMT +P V D
Sbjct: 31 MRDNRVRSVLVID-DGVLVGIVTQGDCAIKVLLPGLDAKQTPVGQVMTGDPVTVKPDHRL 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
+ M Q FRHLPV++ G+V+ ++ I + + I +E
Sbjct: 90 DSCMAMMSQRSFRHLPVLDAGKVVGVISIGDVVKNIIRDLE 130
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Query: 145 STIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNL 204
S + + V+ + D V+ A ++M + R+ S +V + GI+T D ++V+ L
Sbjct: 6 SALAQKTGAVIHVRSGDMVVEALRQMRDNRVRSVLVIDDGVLVGIVTQGDCAIKVLLPGL 65
Query: 205 PADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
A T V +VMT +P D + + +M F HLPV+D G VV V+ +
Sbjct: 66 DAKQTPVGQVMTGDPVTVKPDHRLDSCMAMMSQRSFRHLPVLDA-GKVVGVISI 118
>gi|358446979|ref|ZP_09157516.1| putative uncharacterized protein [Corynebacterium casei UCMA 3821]
gi|356607076|emb|CCE55869.1| putative uncharacterized protein [Corynebacterium casei UCMA 3821]
Length = 618
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M V +LL+ + + LL GI+TD+D+ RV+A+ ++ PV+ VMT++ + SD+LA
Sbjct: 178 MEEYSVSSLLVIEGDDLL-GIITDRDMRGRVVAQGVDTAR-PVADVMTKDLLTLGSDSLA 235
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL---DIAKCLYD 95
+EAL M + K HLPVV+ G V ++ DIA+ L++
Sbjct: 236 MEALMYMSERKIHHLPVVDKGTVTGIVTQNDIARLLHN 273
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 5/115 (4%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
+K + P ++ A ++M E +SS +V + GI+T +D+ RV++Q + + V
Sbjct: 160 AKPRSCPPDLSIREAAQRMEEYSVSSLLVIEGDDLLGIITDRDMRGRVVAQGVDT-ARPV 218
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV---DVIHITH 263
VMT + D+ ++AL M + K HLPVVD+ G V +V D+ + H
Sbjct: 219 ADVMTKDLLTLGSDSLAMEALMYMSERKIHHLPVVDK-GTVTGIVTQNDIARLLH 272
>gi|336323556|ref|YP_004603523.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Flexistipes sinusarabici DSM
4947]
gi|336107137|gb|AEI14955.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Flexistipes sinusarabici DSM
4947]
Length = 639
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIAR--ELNLEETPVSKVMTRNPTFVLSDT 58
M + + ++L+ DSN + GI+T++D+ T++++R E ++ S+ MT +P + SD
Sbjct: 186 MTEKGISSILICDSNNKVEGIVTERDLVTKILSRNDEFCQKDMKASEFMTPDPYVMSSDD 245
Query: 59 LAVEALQKMVQGKFRHLPVVENGEVIALLDI 89
EA M++ K RHLP+V+N E+ +L I
Sbjct: 246 YMYEAAAFMLRHKIRHLPIVDNEELTGILSI 276
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILMRVISQN--LPADS 208
S VT+S T M E +SS ++ NK GI+T +D++ +++S+N
Sbjct: 168 SNPVTVSRKATASEIANVMTEKGISSILICDSNNKVEGIVTERDLVTKILSRNDEFCQKD 227
Query: 209 TLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
+ MTP+P + D + +A M K HLP+VD +
Sbjct: 228 MKASEFMTPDPYVMSSDDYMYEAAAFMLRHKIRHLPIVDNE 268
>gi|256422836|ref|YP_003123489.1| signal transduction protein with CBS domains [Chitinophaga
pinensis DSM 2588]
gi|256037744|gb|ACU61288.1| putative signal transduction protein with CBS domains
[Chitinophaga pinensis DSM 2588]
Length = 120
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+ + + AL++ D + L GI T++D A +V+ + + +ET V +MT +P FV DT
Sbjct: 8 LEEKNLGALVVVDESEKLIGIFTERDYARKVVLKGRSSKETYVRDIMTDSPVFVSPDTDI 67
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIA 90
+Q M RHLPV+EN E+ ++ I
Sbjct: 68 EYCMQLMTNKFIRHLPVIENNELTGIISIG 97
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 16/115 (13%)
Query: 169 KMLELRLSSAVVTVENKPR--GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDT 226
++LE + A+V V+ + GI T +D +V+ + + T V +MT +P + DT
Sbjct: 6 EVLEEKNLGALVVVDESEKLIGIFTERDYARKVVLKGRSSKETYVRDIMTDSPVFVSPDT 65
Query: 227 PIVDALHIMHDGKFLHLPVVDRD--------GDVVDVV----DVI--HITHAAVA 267
I + +M + HLPV++ + GD+V V D I H+ H V+
Sbjct: 66 DIEYCMQLMTNKFIRHLPVIENNELTGIISIGDIVKHVISNKDFIIQHLEHYIVS 120
>gi|121595155|ref|YP_987051.1| signal-transduction protein [Acidovorax sp. JS42]
gi|120607235|gb|ABM42975.1| putative signal-transduction protein with CBS domains [Acidovorax
sp. JS42]
Length = 145
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+ + + + GI T++D A +++ + +TPVS+VMTR FV A
Sbjct: 32 MADKGIGALLVMEGDQI-AGIFTERDYARKMVLLGRSSGDTPVSEVMTRAVRFVRPAQSA 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
+ + M + + RHLPVVE G V+ L+ I + I+ +
Sbjct: 91 EQCMALMTENRLRHLPVVEGGRVVGLVSIGDLVKSVISEQQ 131
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
+V + P+DTVL A ++M + + + +V ++ GI T +D +++ + T V
Sbjct: 14 GQVHAVEPSDTVLTALRRMADKGIGALLVMEGDQIAGIFTERDYARKMVLLGRSSGDTPV 73
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA-TEI 270
+VMT + +M + + HLPVV+ G VV +V + + + ++ +
Sbjct: 74 SEVMTRAVRFVRPAQSAEQCMALMTENRLRHLPVVE-GGRVVGLVSIGDLVKSVISEQQF 132
Query: 271 LLDQI 275
+++Q+
Sbjct: 133 IIEQM 137
>gi|374853591|dbj|BAL56495.1| hypothetical conserved protein [uncultured alpha proteobacterium]
Length = 152
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 8/117 (6%)
Query: 133 ETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPR--GIL 190
E + +R R LS + + VT +P TV A + M E S VV V+ R GI
Sbjct: 6 EAMPQRPVREILS-----RPEPVTATPETTVRRAAELMTEHACGS-VVVVDAAGRVVGIF 59
Query: 191 TSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
T +D+ RV++ L D+T + VMTP P+ D P+ DA+ M + + HLPV+D
Sbjct: 60 TERDLTRRVVAAGLDPDTTPLSAVMTPEPDTIAADAPVADAIRHMDECGYKHLPVLD 116
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 55/93 (59%)
Query: 8 ALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKM 67
++++ D+ + GI T++D+ RV+A L+ + TP+S VMT P + +D +A++ M
Sbjct: 45 SVVVVDAAGRVVGIFTERDLTRRVVAAGLDPDTTPLSAVMTPEPDTIAADAPVADAIRHM 104
Query: 68 VQGKFRHLPVVENGEVIALLDIAKCLYDAIARM 100
+ ++HLPV++ +I ++ + IA++
Sbjct: 105 DECGYKHLPVLDGERLIGVVAPEDIPFAEIAQL 137
>gi|126740209|ref|ZP_01755898.1| CBS domain protein [Roseobacter sp. SK209-2-6]
gi|126718664|gb|EBA15377.1| CBS domain protein [Roseobacter sp. SK209-2-6]
Length = 173
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRN-PTFVLSDTL 59
+A + + ALL+TD++ L GIL+++DI ++ A V++ MT+N T L D L
Sbjct: 61 LADKHIGALLVTDADGALVGILSERDIVRKLAATPGQTLPQTVAENMTKNVQTCSLDDQL 120
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAA 104
V+ L+ M G+FRH+PV+E+G++ +L I + + +E A
Sbjct: 121 -VDVLKTMTDGRFRHIPVLEDGKLCGMLTIGDVVNYRLLELEYEA 164
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 59/101 (58%), Gaps = 8/101 (7%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILMRVIS---QNLPADST 209
V +I+P DT+ A K + + + + +VT + GIL+ +DI+ ++ + Q LP T
Sbjct: 45 VFSITPDDTLSTAVKVLADKHIGALLVTDADGALVGILSERDIVRKLAATPGQTLP--QT 102
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG 250
+ E MT N + ++D +VD L M DG+F H+PV++ DG
Sbjct: 103 VAEN-MTKNVQTCSLDDQLVDVLKTMTDGRFRHIPVLE-DG 141
>gi|90417798|ref|ZP_01225710.1| putative CBS domain protein [Aurantimonas manganoxydans SI85-9A1]
gi|90337470|gb|EAS51121.1| putative CBS domain protein [Aurantimonas manganoxydans SI85-9A1]
Length = 143
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A RR+ A++LT+ N + GI++++D+ + + V +VMT + T
Sbjct: 30 LANRRIGAIVLTNENGGVAGIVSERDVVRVLGTAGVGAISQSVGEVMTSQVSTCTEATTV 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAA-EKGKAIAAA 113
+A++ M G+FRHLPV EN ++ ++ I + I +ER A E + IAA
Sbjct: 90 NQAMEMMTTGRFRHLPVCENDRLVGIISIGDVVKQRIEEVEREAMEMREYIAAG 143
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 147 IIPEKSK-VVTISPTDTVLMATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVISQNL 204
I+ K + VVT+ P T+ + + R+ + V+T EN GI++ +D++ + + +
Sbjct: 6 ILEAKGRDVVTLKPEATLEETMQVLANRRIGAIVLTNENGGVAGIVSERDVVRVLGTAGV 65
Query: 205 PADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD--------GDVV 253
A S V +VMT T T + A+ +M G+F HLPV + D GDVV
Sbjct: 66 GAISQSVGEVMTSQVSTCTEATTVNQAMEMMTTGRFRHLPVCENDRLVGIISIGDVV 122
>gi|124028007|ref|YP_001013327.1| hypothetical protein Hbut_1145 [Hyperthermus butylicus DSM 5456]
gi|123978701|gb|ABM80982.1| conserved archaeal protein [Hyperthermus butylicus DSM 5456]
Length = 153
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPR--GILTSKDILMRVISQNLPADSTL 210
V+T P DTV+ A +KM + + S VV V++K GILT DI+ RV+++ L TL
Sbjct: 21 NVITCKPDDTVVDAARKMAKYSIGSVVV-VDDKGTILGILTEGDIVRRVVARGLDPSRTL 79
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
V VMT NP D + A M HLPVV+ G +V ++
Sbjct: 80 VRDVMTTNPVTIYSDATLAAAAEYMKRKGIGHLPVVNEQGRLVGII 125
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + ++++ D + GILT+ DI RV+AR L+ T V VMT NP + SD
Sbjct: 38 MAKYSIGSVVVVDDKGTILGILTEGDIVRRVVARGLDPSRTLVRDVMTTNPVTIYSDATL 97
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALL 87
A + M + HLPVV E G ++ ++
Sbjct: 98 AAAAEYMKRKGIGHLPVVNEQGRLVGII 125
>gi|393762079|ref|ZP_10350708.1| hypothetical protein AGRI_03834 [Alishewanella agri BL06]
gi|392607111|gb|EIW89993.1| hypothetical protein AGRI_03834 [Alishewanella agri BL06]
Length = 606
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL 210
+++ V+IS +V A + M E R+SS +V + + GILT +D+ RV++ NLPA +T
Sbjct: 149 QARKVSISGEHSVQQAAQLMTEKRVSSLLVEQDERLTGILTDRDLRTRVLAANLPA-TTP 207
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDR 248
V++VMTP P + +A+ +M HLPV+++
Sbjct: 208 VQQVMTPKPHTIDKHAYLFEAVQLMSRFNIHHLPVLEQ 245
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +RV +LL+ + + L GILTD+D+ TRV+A L TPV +VMT P +
Sbjct: 168 MTEKRVSSLLV-EQDERLTGILTDRDLRTRVLAANLP-ATTPVQQVMTPKPHTIDKHAYL 225
Query: 61 VEALQKMVQGKFRHLPVVENG 81
EA+Q M + HLPV+E G
Sbjct: 226 FEAVQLMSRFNIHHLPVLEQG 246
>gi|303248672|ref|ZP_07334926.1| multi-sensor hybrid histidine kinase [Desulfovibrio fructosovorans
JJ]
gi|302489928|gb|EFL49854.1| multi-sensor hybrid histidine kinase [Desulfovibrio fructosovorans
JJ]
Length = 819
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 110/258 (42%), Gaps = 44/258 (17%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M R + L+ T+ A + GI+T++DI R L+ E PV VMT V +DT+
Sbjct: 30 MRDRGISCLVATEDGAPV-GIVTERDILWAAAHRGLDFPERPVGDVMTAPVITVPADTML 88
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA--VEGVE 118
VEA M Q RHL +V+ A + G + + V G+E
Sbjct: 89 VEAYHLMAQKHLRHLVMVDA----------------------AGKAGGVLTQSDLVAGLE 126
Query: 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSA 178
H G ++G + + VVT +V A ++M +S
Sbjct: 127 -HEG--LTGAKCVADIM---------------TRDVVTAPGNISVREAVRRMASRSISCL 168
Query: 179 VVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDG 238
VV E++P GI+T +D++ R+++ N + +M+ C D P+ +A +M
Sbjct: 169 VVAREDRPAGIITERDVV-RLLADNPRLGRLTLYDIMSCPVVCVEADQPVFEAAMLMKKR 227
Query: 239 KFLHLPVVDRDGDVVDVV 256
+ L VVD D V+ +V
Sbjct: 228 RMRRLVVVDDDRRVLGLV 245
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 47/99 (47%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
S V+ ISP +T+ A M + +S V T + P GI+T +DIL + L V
Sbjct: 12 SDVIAISPAETMRSALAVMRDRGISCLVATEDGAPVGIVTERDILWAAAHRGLDFPERPV 71
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG 250
VMT DT +V+A H+M HL +VD G
Sbjct: 72 GDVMTAPVITVPADTMLVEAYHLMAQKHLRHLVMVDAAG 110
>gi|145295429|ref|YP_001138250.1| hypothetical protein cgR_1366 [Corynebacterium glutamicum R]
gi|140845349|dbj|BAF54348.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 622
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 64/103 (62%), Gaps = 4/103 (3%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL-VEK 213
++ SP T++ A KM E +SS +V ++ + +GI+T +D+ RV++++L D L V +
Sbjct: 166 ISCSPDTTIMDAAIKMDEFGVSSLLVQIDGELKGIITDRDMRSRVVAKDL--DIQLPVTE 223
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
VMT +P CAT +A+ +M + + HLP+VD DG + +V
Sbjct: 224 VMTVDPRCATSQGLAFEAMLLMSELRIHHLPIVD-DGQISGIV 265
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 10 LLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQ 69
LL + L GI+TD+D+ +RV+A++L+++ PV++VMT +P S LA EA+ M +
Sbjct: 189 LLVQIDGELKGIITDRDMRSRVVAKDLDIQ-LPVTEVMTVDPRCATSQGLAFEAMLLMSE 247
Query: 70 GKFRHLPVVENGEVIALLDIAKCL 93
+ HLP+V++G++ ++ A +
Sbjct: 248 LRIHHLPIVDDGQISGIVTAADIM 271
>gi|27380662|ref|NP_772191.1| hypothetical protein bll5551 [Bradyrhizobium japonicum USDA 110]
gi|27353827|dbj|BAC50816.1| bll5551 [Bradyrhizobium japonicum USDA 110]
Length = 142
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNP-TFVLSDTL 59
+ +++ A+L+ + + L GIL+++DI + R + PVS+VMTR T +DT+
Sbjct: 30 LGEKKIGAVLVMNQSRLE-GILSERDIVRVIGERGAGALDEPVSQVMTRKVVTCKETDTV 88
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
A E ++ M GKFRHLPV++NG+V+ L+ I + + E E
Sbjct: 89 A-ELMETMTTGKFRHLPVIDNGKVVGLISIGDIVKRRVQEYESEQE 133
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 13/112 (11%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQ------NLPA 206
+++++ P + A K + E ++ + +V +++ GIL+ +DI+ RVI + + P
Sbjct: 13 QIMSVEPDAKLAAAIKLLGEKKIGAVLVMNQSRLEGILSERDIV-RVIGERGAGALDEPV 71
Query: 207 DSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+ KV+T C DT + + + M GKF HLPV+D +G VV ++ +
Sbjct: 72 SQVMTRKVVT----CKETDT-VAELMETMTTGKFRHLPVID-NGKVVGLISI 117
>gi|239820152|ref|YP_002947337.1| putative signal transduction protein with CBS domains [Variovorax
paradoxus S110]
gi|239805005|gb|ACS22071.1| putative signal transduction protein with CBS domains [Variovorax
paradoxus S110]
Length = 145
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 41/59 (69%)
Query: 188 GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVV 246
GILT +D++ RV+++ L D T V +VMTPNP C +TP+ DA+ +M + F HLP+V
Sbjct: 50 GILTERDLMTRVLARGLDPDRTTVREVMTPNPICVPPETPVSDAVVLMLERGFRHLPLV 108
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 57/95 (60%), Gaps = 9/95 (9%)
Query: 17 LLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLP 76
+L GILT++D+ TRV+AR L+ + T V +VMT NP V +T +A+ M++ FRHLP
Sbjct: 47 ILLGILTERDLMTRVLARGLDPDRTTVREVMTPNPICVPPETPVSDAVVLMLERGFRHLP 106
Query: 77 VVENGEVIALLDIAKCLYDAIARMERAAEKGKAIA 111
+V +++ + + DA+ R E G A++
Sbjct: 107 LVAGTKILGVFSV----RDALPR-----ELGTAVS 132
>gi|149173046|ref|ZP_01851677.1| hypothetical protein PM8797T_27689 [Planctomyces maris DSM 8797]
gi|148847852|gb|EDL62184.1| hypothetical protein PM8797T_27689 [Planctomyces maris DSM 8797]
Length = 144
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +R V L++ D + G++TD+D+A R++ + + +T VS+VMTR P V +T
Sbjct: 27 MNSRNVGTLIVLDEESHPIGMITDRDLALRIVGKARDSIQTLVSEVMTRFPDNVNEETTI 86
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALL---DIAKCLYDAIARMERAAEK 106
AL KM G FR LPVV+N G+++ +L DI + L + R +K
Sbjct: 87 ELALSKMRAGGFRKLPVVDNEGKLVGVLTLDDILELLSTEFTEIGRLIKK 136
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%)
Query: 179 VVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDG 238
V+ E+ P G++T +D+ +R++ + + TLV +VMT P+ +T I AL M G
Sbjct: 37 VLDEESHPIGMITDRDLALRIVGKARDSIQTLVSEVMTRFPDNVNEETTIELALSKMRAG 96
Query: 239 KFLHLPVVDRDGDVVDVV 256
F LPVVD +G +V V+
Sbjct: 97 GFRKLPVVDNEGKLVGVL 114
>gi|170696511|ref|ZP_02887635.1| putative signal-transduction protein with CBS domains [Burkholderia
graminis C4D1M]
gi|170138558|gb|EDT06762.1| putative signal-transduction protein with CBS domains [Burkholderia
graminis C4D1M]
Length = 146
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + AL++TD +++ GI+T++D A +V+ + + + TPV ++M++ FV D
Sbjct: 32 MADKGIGALVVTDGDSI-AGIITERDYARKVVLMDRSSKATPVREIMSKAVRFVRPDQTT 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
+ + M + + RHLPV+EN +I ++ I + + IA +
Sbjct: 91 DDCMALMTERRMRHLPVIENDRLIGMVSIGDLVKNIIAEQQ 131
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 49/98 (50%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
+ V TI D+V A + M + + + VVT + GI+T +D +V+ + + +T V
Sbjct: 14 TTVYTIGADDSVYEAIRLMADKGIGALVVTDGDSIAGIITERDYARKVVLMDRSSKATPV 73
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
++M+ D D + +M + + HLPV++ D
Sbjct: 74 REIMSKAVRFVRPDQTTDDCMALMTERRMRHLPVIEND 111
>gi|325914102|ref|ZP_08176455.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas vesicatoria ATCC 35937]
gi|325539605|gb|EGD11248.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas vesicatoria ATCC 35937]
Length = 135
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA R + A+L+ D L+ GI++++D A +V+ R+ + T V+++M+ V
Sbjct: 24 MAERGIGAVLVMDGERLV-GIVSERDYARKVVLRDRSSATTSVAEIMSSQVVTVSPSETV 82
Query: 61 VEALQKMVQGKFRHLPVVENGE---VIALLDIAKCLYDA 96
+Q M G+FRHLPVVENG VI++ D+ K + +A
Sbjct: 83 ERCMQLMTDGRFRHLPVVENGRVQSVISIGDLVKAVIEA 121
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 188 GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
GI++ +D +V+ ++ + +T V ++M+ + + + +M DG+F HLPVV+
Sbjct: 42 GIVSERDYARKVVLRDRSSATTSVAEIMSSQVVTVSPSETVERCMQLMTDGRFRHLPVVE 101
Query: 248 RDGDVVDVVDVIHITHAAV-ATEILLDQIMR 277
+G V V+ + + A + A + +DQ+ R
Sbjct: 102 -NGRVQSVISIGDLVKAVIEAQQQDIDQLQR 131
>gi|389689370|ref|ZP_10178708.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Microvirga sp. WSM3557]
gi|388590281|gb|EIM30566.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Microvirga sp. WSM3557]
Length = 143
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A RR+ ALL+ D + + GI++++DI V A+ + PVS+ MT +T
Sbjct: 30 LAERRIGALLIVDGHRPVVGIISERDIVRAVAAQGAKALDEPVSRFMTEKVVTCTGETSI 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIA 90
+ ++ M Q KFRH+PVVE G + ++ I
Sbjct: 90 NDIMELMTQQKFRHIPVVEGGRLSGIISIG 119
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPR-GILTSKDILMRVISQNLPADSTLVE 212
V TI P+ ++ A + + E R+ + ++ ++P GI++ +DI+ V +Q A V
Sbjct: 14 VATIEPSRSLSEAARVLAERRIGALLIVDGHRPVVGIISERDIVRAVAAQGAKALDEPVS 73
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD--RDGDVVDVVDVIHITHAAVATE 269
+ MT T +T I D + +M KF H+PVV+ R ++ + DV+ + V E
Sbjct: 74 RFMTEKVVTCTGETSINDIMELMTQQKFRHIPVVEGGRLSGIISIGDVVKLRLEEVEAE 132
>gi|347756284|ref|YP_004863847.1| putative contains C-terminal CBS domains [Candidatus
Chloracidobacterium thermophilum B]
gi|347588801|gb|AEP13330.1| putative transcriptional regulator, contains C-terminal CBS domains
[Candidatus Chloracidobacterium thermophilum B]
Length = 162
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
Query: 150 EKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADST 209
E S+ V ++P ++ M+ R A V GI+T +D L++VI + +
Sbjct: 23 EPSRPVIVAPDTSLAETITAMMAERAGYAFVCENGSLLGIVTERDYLLKVIGLGVEYTAP 82
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHI 261
V+ MTPNP D IV+A+ +M G + HLPV+D +G ++ V+ HI
Sbjct: 83 -VKDFMTPNPTTIREDATIVEAMRLMDAGNYRHLPVLDAEGRILGVISTRHI 133
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEET-PVSKVMTRNPTFVLSDTL 59
M A R + ++ +LL GI+T++D +VI L +E T PV MT NPT + D
Sbjct: 43 MMAERAGYAFVCENGSLL-GIVTERDYLLKVIG--LGVEYTAPVKDFMTPNPTTIREDAT 99
Query: 60 AVEALQKMVQGKFRHLPVVE-NGEVIALL 87
VEA++ M G +RHLPV++ G ++ ++
Sbjct: 100 IVEAMRLMDAGNYRHLPVLDAEGRILGVI 128
>gi|163760297|ref|ZP_02167380.1| hypothetical protein HPDFL43_08544 [Hoeflea phototrophica DFL-43]
gi|162282696|gb|EDQ32984.1| hypothetical protein HPDFL43_08544 [Hoeflea phototrophica DFL-43]
Length = 142
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 62/113 (54%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A ++ A+++T + + GIL+++DI + +R + P+ +MT T
Sbjct: 30 LADNKIGAVVVTGAGGKIAGILSERDIVRAIASRGADALSAPIYDIMTSKVTTCGESHTV 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113
+ ++ M +G+FRHLPV +G++I ++ I + I +ER AE+ KA A+
Sbjct: 90 NQVMELMTKGRFRHLPVEADGKLIGIISIGDVVRRRIEDVEREAEEIKAYIAS 142
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
Query: 147 IIPEKSK-VVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILMRVISQNL 204
I+ EK + VVT+SP+ A + + + ++ + VVT K GIL+ +DI+ + S+
Sbjct: 6 ILDEKGREVVTVSPSMGTADAVRFLADNKIGAVVVTGAGGKIAGILSERDIVRAIASRGA 65
Query: 205 PADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
A S + +MT + + +M G+F HLP V+ DG ++ ++ +
Sbjct: 66 DALSAPIYDIMTSKVTTCGESHTVNQVMELMTKGRFRHLP-VEADGKLIGIISI 118
>gi|119774661|ref|YP_927401.1| hypothetical protein Sama_1524 [Shewanella amazonensis SB2B]
gi|119767161|gb|ABL99731.1| CBS domain protein [Shewanella amazonensis SB2B]
Length = 618
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 5 RVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEAL 64
RV +LL+TD + L CGILTD+D+ RV+A + PV + MTRNP + + L EA+
Sbjct: 183 RVSSLLVTDHHKL-CGILTDRDLRNRVLAEGFD-GTLPVHQAMTRNPVTIGAGALVFEAM 240
Query: 65 QKMVQGKFRHLPVVEN 80
M + HLPV+E
Sbjct: 241 LAMSERNIHHLPVLEG 256
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL-VEK 213
+TI ++ A M + R+SS +VT +K GILT +D+ RV+++ D TL V +
Sbjct: 164 LTIDCNHSIRQAAVMMRDARVSSLLVTDHHKLCGILTDRDLRNRVLAEGF--DGTLPVHQ 221
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
MT NP + +A+ M + HLPV++ D
Sbjct: 222 AMTRNPVTIGAGALVFEAMLAMSERNIHHLPVLEGD 257
>gi|448618992|ref|ZP_21666929.1| putative signal transduction protein [Haloferax mediterranei ATCC
33500]
gi|445745598|gb|ELZ97064.1| putative signal transduction protein [Haloferax mediterranei ATCC
33500]
Length = 406
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 90/200 (45%), Gaps = 17/200 (8%)
Query: 8 ALLLTDSNALLCGILTDKDIATRVIARELNLEETP------VSKVMTRNPTFVLSDTLAV 61
A L+ DS++ + + +D+ V A ++ E P V V T V +
Sbjct: 82 AQLMLDSDSKVLPVFEGRDLIGVVTADDILQEVKPFLDAATVDDVYTNGLVSVEPTSTVG 141
Query: 62 EALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA---RMERAAEKGKAIAAAVEG-- 116
EAL + HLPVV++G + +L LYD + R ER ++ G A G
Sbjct: 142 EALHTFRDNRITHLPVVDDGTAVGIL----SLYDVVGLTVRSERQSKGGDASGTDSYGGS 197
Query: 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
+ G S G E R+ + ++ S V TISP++T+ A +KM + S
Sbjct: 198 LSSSAGRSRKGGFGAREGELARILDLPVRDVMV--SPVRTISPSETLESAVEKMFAIEGS 255
Query: 177 SAVVTVENKPRGILTSKDIL 196
S VV V+ +P GI+T D+L
Sbjct: 256 SLVVIVDGQPSGIVTKTDVL 275
>gi|222111496|ref|YP_002553760.1| signal transduction protein with cbs domains [Acidovorax ebreus
TPSY]
gi|221730940|gb|ACM33760.1| putative signal transduction protein with CBS domains [Acidovorax
ebreus TPSY]
Length = 145
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+ + + + GI T++D A +++ + +TPVS+VMTR FV A
Sbjct: 32 MADKGIGALLVMEGDQI-AGIFTERDYARKMVLLGRSSGDTPVSEVMTRAVRFVRPTQSA 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
+ + M + + RHLPVVE G V+ L+ I + I+ +
Sbjct: 91 EQCMALMTENRLRHLPVVEAGRVVGLVSIGDLVKSVISEQQ 131
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
+V + P+DTVL A ++M + + + +V ++ GI T +D +++ + T V
Sbjct: 14 GQVHAVEPSDTVLTALRRMADKGIGALLVMEGDQIAGIFTERDYARKMVLLGRSSGDTPV 73
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA-TEI 270
+VMT + +M + + HLPVV+ G VV +V + + + ++ +
Sbjct: 74 SEVMTRAVRFVRPTQSAEQCMALMTENRLRHLPVVE-AGRVVGLVSIGDLVKSVISEQQF 132
Query: 271 LLDQI 275
+++Q+
Sbjct: 133 IIEQM 137
>gi|332797972|ref|YP_004459472.1| paired CBS domain-containing protein [Acidianus hospitalis W1]
gi|332695707|gb|AEE95174.1| paired CBS domain protein [Acidianus hospitalis W1]
Length = 164
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 4/114 (3%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSS-AVVTVENKPRGILTSKDILMRVISQNLPADSTL 210
+KV + P T+ A K+M E L S V+ +N+ GI+T +D++ V ++++
Sbjct: 11 TKVYVVKPNVTIAEAAKEMKEHNLGSLVVIDSQNRVVGIITERDVVRAVSNRDIDGP--- 67
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
VEK MT + + T DT + DAL +M + F HLP++ DG + +V + + A
Sbjct: 68 VEKYMTKDVKGVTEDTSVTDALDVMLNNGFRHLPIIKSDGKLYGIVSIRDLARA 121
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + +L++ DS + GI+T++D+ V R++ + PV K MT++ V DT
Sbjct: 29 MKEHNLGSLVVIDSQNRVVGIITERDVVRAVSNRDI---DGPVEKYMTKDVKGVTEDTSV 85
Query: 61 VEALQKMVQGKFRHLPVVE-NGE---VIALLDIAKCLYDA-IARMERAAE--KGKAIAAA 113
+AL M+ FRHLP+++ +G+ ++++ D+A+ L D + + AE KG +
Sbjct: 86 TDALDVMLNNGFRHLPIIKSDGKLYGIVSIRDLARALLDVHTMQFGKPAEEVKGSGVVCP 145
Query: 114 VEGVE-KHWGTSISGPNT 130
V G+E +G G +
Sbjct: 146 VCGMEIDEYGYCGCGTGS 163
>gi|389848897|ref|YP_006351133.1| signal transduction protein [Haloferax mediterranei ATCC 33500]
gi|388246203|gb|AFK21146.1| putative signal transduction protein with CBS domains [Haloferax
mediterranei ATCC 33500]
Length = 465
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 90/200 (45%), Gaps = 17/200 (8%)
Query: 8 ALLLTDSNALLCGILTDKDIATRVIARELNLEETP------VSKVMTRNPTFVLSDTLAV 61
A L+ DS++ + + +D+ V A ++ E P V V T V +
Sbjct: 141 AQLMLDSDSKVLPVFEGRDLIGVVTADDILQEVKPFLDAATVDDVYTNGLVSVEPTSTVG 200
Query: 62 EALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA---RMERAAEKGKAIAAAVEG-- 116
EAL + HLPVV++G + +L LYD + R ER ++ G A G
Sbjct: 201 EALHTFRDNRITHLPVVDDGTAVGIL----SLYDVVGLTVRSERQSKGGDASGTDSYGGS 256
Query: 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
+ G S G E R+ + ++ S V TISP++T+ A +KM + S
Sbjct: 257 LSSSAGRSRKGGFGAREGELARILDLPVRDVMV--SPVRTISPSETLESAVEKMFAIEGS 314
Query: 177 SAVVTVENKPRGILTSKDIL 196
S VV V+ +P GI+T D+L
Sbjct: 315 SLVVIVDGQPSGIVTKTDVL 334
>gi|414162088|ref|ZP_11418335.1| hypothetical protein HMPREF9697_00236 [Afipia felis ATCC 53690]
gi|410879868|gb|EKS27708.1| hypothetical protein HMPREF9697_00236 [Afipia felis ATCC 53690]
Length = 142
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 4 RRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNP-TFVLSDTLAVE 62
R + A+L+ + + + GIL+++D+ + R ++ + PVS+VMTR T +DT A+
Sbjct: 33 RHIGAVLVMNGHHI-DGILSERDVVRVLGQRGASVLDAPVSEVMTRKVVTCRRADTAAL- 90
Query: 63 ALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
++KM GKFRHLPVVEN V+ L+ I + + ER E
Sbjct: 91 IMEKMTNGKFRHLPVVENDRVVGLISIGDIVKWRVKEYEREQE 133
>gi|260773740|ref|ZP_05882655.1| Signal transduction protein [Vibrio metschnikovii CIP 69.14]
gi|260610701|gb|EEX35905.1| Signal transduction protein [Vibrio metschnikovii CIP 69.14]
Length = 619
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Query: 3 ARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVE 62
+ R AL++ N L G++TD+D+ RVIA L L TP+S++MT++P + SD L +E
Sbjct: 180 SHRSSALVM--DNDQLVGVVTDRDMTKRVIAAGLTLN-TPISQIMTQHPQTIQSDALLLE 236
Query: 63 ALQKMVQGKFRHLPVVENGEVIALL 87
A++ M+ R LPV+E +V+ +L
Sbjct: 237 AMEMMMLHNVRSLPVLEGEQVVGVL 261
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 68/123 (55%), Gaps = 4/123 (3%)
Query: 160 TDTVLM-ATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPN 218
TDT++ A + M+ SSA+V ++ G++T +D+ RVI+ L + T + ++MT +
Sbjct: 166 TDTLVQEAAQIMVNSHRSSALVMDNDQLVGVVTDRDMTKRVIAAGLTLN-TPISQIMTQH 224
Query: 219 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA-VATEILLDQIMR 277
P+ D +++A+ +M LPV++ + VV V+ +T + V L+ +I R
Sbjct: 225 PQTIQSDALLLEAMEMMMLHNVRSLPVLEGE-QVVGVLTATSLTEKSHVHAVFLISRIYR 283
Query: 278 QQA 280
Q++
Sbjct: 284 QES 286
>gi|149201936|ref|ZP_01878910.1| CBS domain protein [Roseovarius sp. TM1035]
gi|149144984|gb|EDM33013.1| CBS domain protein [Roseovarius sp. TM1035]
Length = 144
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A RR+ L+++ + GI++++DI + R + VS++MTRNP +
Sbjct: 31 LAERRIGGLVVSRDGETVEGIISERDIVRSLAVRGVVCMTETVSEMMTRNPVCCSRQDTS 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL---DIAKCLYDAIARMERAAEKG 107
L +M G+FRH+PVVE G+++ ++ D+ K + +A ME+ A +G
Sbjct: 91 DAVLARMTDGRFRHMPVVEAGKLVGIVTIGDVVKARLEELA-MEKTALEG 139
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVISQNLPADSTL 210
S V+TISP V A + + E R+ VV+ + + GI++ +DI+ + + + +
Sbjct: 13 SAVITISPQTKVSEAAQTLAERRIGGLVVSRDGETVEGIISERDIVRSLAVRGVVCMTET 72
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
V ++MT NP C + L M DG+F H+PVV+ G +V +V + + A
Sbjct: 73 VSEMMTRNPVCCSRQDTSDAVLARMTDGRFRHMPVVE-AGKLVGIVTIGDVVKA 125
>gi|56460527|ref|YP_155808.1| Signal-transduction protein [Idiomarina loihiensis L2TR]
gi|56179537|gb|AAV82259.1| Signal-transduction protein [Idiomarina loihiensis L2TR]
Length = 617
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 58/96 (60%), Gaps = 7/96 (7%)
Query: 1 MAARRVDALLLTD-SNALLCGILTDKDIATRVIARELNLEET-PVSKVMTRNPTFVLSDT 58
M +V +LL+ D + L GI+TDKD+ RV+A +N T PVS +MT N TFV +
Sbjct: 176 MTDEKVSSLLIIDETQHLPVGIITDKDLRKRVLA--VNRSSTHPVSSIMTENLTFVQHNN 233
Query: 59 LAVEALQKMVQGKFRHLPVVENGE---VIALLDIAK 91
EAL M++ HLPV++ G+ VIAL D+A+
Sbjct: 234 RVFEALLIMMRTNLHHLPVLKKGQVVGVIALSDVAQ 269
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 67/129 (51%), Gaps = 5/129 (3%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENK--PRGILTSKDILMRVISQNLPADSTLVE 212
V+I ++ A KM + ++SS ++ E + P GI+T KD+ RV++ N + + V
Sbjct: 161 VSIDLNASIHDAAAKMTDEKVSSLLIIDETQHLPVGIITDKDLRKRVLAVNR-SSTHPVS 219
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHIT-HAAVATEIL 271
+MT N + + +AL IM HLPV+ + G VV V+ + + H + +T +
Sbjct: 220 SIMTENLTFVQHNNRVFEALLIMMRTNLHHLPVL-KKGQVVGVIALSDVAQHESKSTLFI 278
Query: 272 LDQIMRQQA 280
+ I +Q +
Sbjct: 279 VSGIFKQNS 287
>gi|304393083|ref|ZP_07375012.1| signal-transduction protein [Ahrensia sp. R2A130]
gi|303294848|gb|EFL89219.1| signal-transduction protein [Ahrensia sp. R2A130]
Length = 145
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 65/108 (60%), Gaps = 4/108 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNP-TFVLSDTL 59
+A RR+ A+L D N + GIL+++DI + E +S MTRN T DT
Sbjct: 30 LADRRIGAILAVDENGKMTGILSERDIIKFLAKDGAAALEKQISACMTRNVVTCQRRDT- 88
Query: 60 AVEALQKMV-QGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEK 106
++A++ M+ +G+FRH+PV+E+GE+ ++ ++ + +A++ R AE+
Sbjct: 89 -IDAVRTMMGEGRFRHVPVMEDGELAGIISVSDVVKHRMAQVSREAEE 135
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVEN-KPRGILTSKDILMRVISQNLPADSTLVEK 213
VTIS ++T+ A + + R+ + + EN K GIL+ +DI+ + A +
Sbjct: 15 VTISQSETLADAATILADRRIGAILAVDENGKMTGILSERDIIKFLAKDGAAALEKQISA 74
Query: 214 VMTPNP-ECATIDTPIVDALH-IMHDGKFLHLPVVDRDGD---VVDVVDVIHITHAAVAT 268
MT N C DT +DA+ +M +G+F H+PV++ DG+ ++ V DV+ A V+
Sbjct: 75 CMTRNVVTCQRRDT--IDAVRTMMGEGRFRHVPVME-DGELAGIISVSDVVKHRMAQVSR 131
Query: 269 E 269
E
Sbjct: 132 E 132
>gi|421599520|ref|ZP_16042717.1| hypothetical protein BCCGELA001_17436 [Bradyrhizobium sp.
CCGE-LA001]
gi|404268373|gb|EJZ32856.1| hypothetical protein BCCGELA001_17436 [Bradyrhizobium sp.
CCGE-LA001]
Length = 142
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 64/106 (60%), Gaps = 3/106 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNP-TFVLSDTL 59
+ +++ A+L+ + + L GIL+++DI + R ++ + PV++VMTR T +DT+
Sbjct: 30 LGEKKIGAVLVMNQSRLE-GILSERDIVRVLGERGASVLDEPVAQVMTRKVVTCKETDTV 88
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
A E ++ M GKFRHLPV++NG+V+ L+ I + + E E
Sbjct: 89 A-ELMETMTTGKFRHLPVIDNGKVVGLISIGDIVKRRVQEYESEQE 133
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 61/112 (54%), Gaps = 13/112 (11%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQ------NLPA 206
+++++ P + A K + E ++ + +V +++ GIL+ +DI+ RV+ + + P
Sbjct: 13 QIMSVEPDAKLSAAVKLLGEKKIGAVLVMNQSRLEGILSERDIV-RVLGERGASVLDEPV 71
Query: 207 DSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+ KV+T C DT + + + M GKF HLPV+D +G VV ++ +
Sbjct: 72 AQVMTRKVVT----CKETDT-VAELMETMTTGKFRHLPVID-NGKVVGLISI 117
>gi|392380710|ref|YP_005029906.1| conserved protein of unknown function; CBS domain [Azospirillum
brasilense Sp245]
gi|356875674|emb|CCC96422.1| conserved protein of unknown function; CBS domain [Azospirillum
brasilense Sp245]
Length = 142
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 61/100 (61%), Gaps = 4/100 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + A+L+ + + L GI+T++D+ +V++ +++ ET VS +MTRNP + D A
Sbjct: 31 MAEKNIGAVLVVN-HGDLVGIVTERDLNNKVLSTQIDAFETEVSAIMTRNPDTLPPDADA 89
Query: 61 VEALQKMVQGKFRHLPVVENGE---VIALLDIAKCLYDAI 97
+EAL M +RHLP+ + ++++ D+ K Y+ +
Sbjct: 90 IEALTLMQSKHYRHLPITQGKRAVGIVSIRDLFKLAYEHL 129
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 65/131 (49%), Gaps = 3/131 (2%)
Query: 150 EKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADST 209
+ +++ ++ +VL +K M E + + +V GI+T +D+ +V+S + A T
Sbjct: 11 KSQELILVTEDTSVLTVSKLMAEKNIGAVLVVNHGDLVGIVTERDLNNKVLSTQIDAFET 70
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD--RDGDVVDVVDVIHITHAAVA 267
V +MT NP+ D ++AL +M + HLP+ R +V + D+ + + +
Sbjct: 71 EVSAIMTRNPDTLPPDADAIEALTLMQSKHYRHLPITQGKRAVGIVSIRDLFKLAYEHLV 130
Query: 268 TEI-LLDQIMR 277
E+ D +MR
Sbjct: 131 EEVEFRDSLMR 141
>gi|15889056|ref|NP_354737.1| conserved hypothetical protein [Agrobacterium fabrum str. C58]
gi|15156853|gb|AAK87522.1| conserved hypothetical protein [Agrobacterium fabrum str. C58]
Length = 144
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 59/111 (53%)
Query: 3 ARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVE 62
A ++ A+++TD++ ++ GI T++D+ V + + VS MT+N ++ +
Sbjct: 34 AHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGAASLQQSVSVAMTKNVVRCQHNSTTDQ 93
Query: 63 ALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113
++ M G+FRH+PV ENG + ++ I + I +E AE KA A
Sbjct: 94 LMEIMTGGRFRHVPVEENGRLAGIISIGDVVKARIGEIEAEAEHIKAYIAG 144
>gi|375103591|ref|ZP_09749852.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderiales bacterium JOSHI_001]
gi|374664322|gb|EHR69107.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderiales bacterium JOSHI_001]
Length = 146
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 50/74 (67%)
Query: 8 ALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKM 67
++L+ ++ + + GILT++D+ TRV+A+ L+ T VS VMT +P + DT +A+ M
Sbjct: 38 SVLIINAASAMVGILTERDLMTRVLAKALDPATTKVSAVMTPHPMCIPPDTKVADAVLIM 97
Query: 68 VQGKFRHLPVVENG 81
++ FRHLPVV +G
Sbjct: 98 IERGFRHLPVVGDG 111
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSA-VVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
+V++ P TV A M S ++ + GILT +D++ RV+++ L +T V
Sbjct: 15 LVSLGPDATVHEAACVMTRANCGSVLIINAASAMVGILTERDLMTRVLAKALDPATTKVS 74
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
VMTP+P C DT + DA+ IM + F HLPVV G + V V
Sbjct: 75 AVMTPHPMCIPPDTKVADAVLIMIERGFRHLPVVGDGGHIHGVFSV 120
>gi|307727770|ref|YP_003910983.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1003]
gi|307588295|gb|ADN61692.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1003]
Length = 147
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + AL++TD +++ GI+T++D A +V+ + + + TPV ++M++ FV D
Sbjct: 33 MADKGIGALVVTDGDSI-AGIVTERDYARKVVLMDRSSKATPVREIMSKAVRFVRPDQTT 91
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
+ + M + + RHLPV+EN ++ ++ I + + IA +
Sbjct: 92 DDCMALMTERRMRHLPVIENDRLVGMVSIGDLVKNIIAEQQ 132
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 50/101 (49%)
Query: 149 PEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADS 208
P + V TI D+V A + M + + + VVT + GI+T +D +V+ + + +
Sbjct: 12 PNHTTVFTIGADDSVYEAIRLMADKGIGALVVTDGDSIAGIVTERDYARKVVLMDRSSKA 71
Query: 209 TLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
T V ++M+ D D + +M + + HLPV++ D
Sbjct: 72 TPVREIMSKAVRFVRPDQTTDDCMALMTERRMRHLPVIEND 112
>gi|350545690|ref|ZP_08915153.1| FOG: CBS domain [Candidatus Burkholderia kirkii UZHbot1]
gi|350526536|emb|CCD40224.1| FOG: CBS domain [Candidatus Burkholderia kirkii UZHbot1]
Length = 167
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + A+++T+ + ++ GI+T++D A +V+ + ++TPV +MT + +V D
Sbjct: 52 MADKHIGAVIVTEGDEIV-GIMTERDYARKVVLMDRASKQTPVHDIMTSHVRYVRPDQTT 110
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
+ + M + RHLPV+ENG+++ ++ I + + I+ +
Sbjct: 111 DDCMALMTDKRMRHLPVIENGKLVGMISIGDLVKNIISEQQ 151
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 136 RERMFRPSLSTII------PEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGI 189
RE R S++T+ P+++ V TI+ T +V A K M + + + +VT ++ GI
Sbjct: 13 REASRRRSMATVAQVLNSKPDQT-VYTIAATASVFDAIKLMADKHIGAVIVTEGDEIVGI 71
Query: 190 LTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
+T +D +V+ + + T V +MT + D D + +M D + HLPV++ +
Sbjct: 72 MTERDYARKVVLMDRASKQTPVHDIMTSHVRYVRPDQTTDDCMALMTDKRMRHLPVIE-N 130
Query: 250 GDVVDVVDV 258
G +V ++ +
Sbjct: 131 GKLVGMISI 139
>gi|308050118|ref|YP_003913684.1| CBS domain and cyclic nucleotide-regulated nucleotidyltransferase
[Ferrimonas balearica DSM 9799]
gi|307632308|gb|ADN76610.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Ferrimonas balearica DSM 9799]
Length = 615
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M A R+ ++L+ N LL GI+TD+D+ RV+A + ++ +PVS+VMT NP V S TL
Sbjct: 176 MRASRISSVLVVQDNRLL-GIVTDRDLRNRVLAEGVPVD-SPVSEVMTANPVSVPSQTLV 233
Query: 61 VEALQKMVQGKFRHLPVVEN 80
EA+ M Q HLPV ++
Sbjct: 234 FEAMLAMSQHNIHHLPVCDD 253
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
S V ++ P + A + M R+SS +V +N+ GI+T +D+ RV+++ +P DS V
Sbjct: 158 SPVQSVGPFTPIQEAAQLMRASRISSVLVVQDNRLLGIVTDRDLRNRVLAEGVPVDSP-V 216
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
+VMT NP T + +A+ M HLPV D
Sbjct: 217 SEVMTANPVSVPSQTLVFEAMLAMSQHNIHHLPVCD 252
>gi|168700189|ref|ZP_02732466.1| CBS domain containing protein [Gemmata obscuriglobus UQM 2246]
Length = 171
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 5 RVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNP-TFVLSDTLAVEA 63
R A+L+T L GILT++D T+V A E PV + MT P T +DTLA A
Sbjct: 74 RTGAVLVTGPGGELVGILTERDFLTKV-AGAPGFEARPVREFMTLAPETVTPTDTLAF-A 131
Query: 64 LQKMVQGKFRHLPVVENGEVIALLDI 89
L KM G +RHLPVVE G + ++ +
Sbjct: 132 LGKMDAGAYRHLPVVEGGRPVGVISV 157
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 12/141 (8%)
Query: 128 PNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPR 187
PN +E + R +S + P +T+ T+ A ++M++ R + +VT
Sbjct: 33 PNGPVEA---SLMREPVSVLDPRPP--ITVDAGATLGDAVRRMIDGRTGAVLVTGPGGEL 87
Query: 188 -GILTSKDILMRVISQNLPA-DSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPV 245
GILT +D L +V P ++ V + MT PE T + AL M G + HLPV
Sbjct: 88 VGILTERDFLTKVAGA--PGFEARPVREFMTLAPETVTPTDTLAFALGKMDAGAYRHLPV 145
Query: 246 VD--RDGDVVDVVDVI-HITH 263
V+ R V+ V D++ H+T
Sbjct: 146 VEGGRPVGVISVRDLLRHVTE 166
>gi|331695746|ref|YP_004331985.1| signal transduction protein [Pseudonocardia dioxanivorans CB1190]
gi|326950435|gb|AEA24132.1| putative signal transduction protein with CBS domains
[Pseudonocardia dioxanivorans CB1190]
Length = 144
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%)
Query: 5 RVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEAL 64
R+ ALL++D + GI++++D+ + R L V +MTRN V S A+
Sbjct: 34 RIGALLVSDGENRIRGIVSERDVIRELARRGNRLLSCNVEDIMTRNVATVSSTESLTYAM 93
Query: 65 QKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
+M +G++RHLPVV+ G ++ ++ I + + ME
Sbjct: 94 AQMTRGRYRHLPVVDGGRLVGMVSIGDLVNHRVREME 130
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Query: 143 SLSTIIPEKSKVV-TISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILMRVI 200
+++ ++ K + V ++ P TV A +++ + R+ + +V+ EN+ RGI++ +D++ +
Sbjct: 2 NIADVLDTKGRTVHSVVPWATVAEAVERLEKYRIGALLVSDGENRIRGIVSERDVIRELA 61
Query: 201 SQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+ S VE +MT N + + A+ M G++ HLPVVD G +V +V +
Sbjct: 62 RRGNRLLSCNVEDIMTRNVATVSSTESLTYAMAQMTRGRYRHLPVVD-GGRLVGMVSI 118
>gi|386401921|ref|ZP_10086699.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM1253]
gi|385742547|gb|EIG62743.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM1253]
Length = 142
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNP-TFVLSDTL 59
+ +++ A+L+ + + L GIL+++DI + R + PV++VMTR T +DT+
Sbjct: 30 LGEKKIGAVLVMNQSRLE-GILSERDIVRVIGERGAGALDEPVAQVMTRKVVTCKETDTV 88
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
A E ++ M GKFRHLPVV+NG+V+ L+ I + + E E
Sbjct: 89 A-ELMEMMTTGKFRHLPVVDNGKVVGLISIGDIVKRRVQEYESEQE 133
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 62/112 (55%), Gaps = 13/112 (11%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQ------NLPA 206
+++++ P + A K + E ++ + +V +++ GIL+ +DI+ RVI + + P
Sbjct: 13 QIMSVEPDAKLAAAVKLLGEKKIGAVLVMNQSRLEGILSERDIV-RVIGERGAGALDEPV 71
Query: 207 DSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+ KV+T C DT + + + +M GKF HLPVVD +G VV ++ +
Sbjct: 72 AQVMTRKVVT----CKETDT-VAELMEMMTTGKFRHLPVVD-NGKVVGLISI 117
>gi|410637999|ref|ZP_11348567.1| CBS domain-containing protein [Glaciecola lipolytica E3]
gi|410142400|dbj|GAC15772.1| CBS domain-containing protein [Glaciecola lipolytica E3]
Length = 611
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
KVV+ ++L AT+KM + +SS ++T NK GILT +DI RV+SQ + + E
Sbjct: 157 KVVSSLSDTSILHATQKMSDAGVSSLLITEANKLVGILTDRDIRNRVVSQEVSVHLPVAE 216
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDR 248
VMT P T + + DAL +M + HLPVVDR
Sbjct: 217 -VMTKEPCKITENRTLFDALCMMTENNIHHLPVVDR 251
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ V +LL+T++N L+ GILTD+DI RV+++E+++ PV++VMT+ P + +
Sbjct: 174 MSDAGVSSLLITEANKLV-GILTDRDIRNRVVSQEVSVH-LPVAEVMTKEPCKITENRTL 231
Query: 61 VEALQKMVQGKFRHLPVVE 79
+AL M + HLPVV+
Sbjct: 232 FDALCMMTENNIHHLPVVD 250
>gi|15922445|ref|NP_378114.1| hypothetical protein ST2119 [Sulfolobus tokodaii str. 7]
gi|15623234|dbj|BAB67223.1| hypothetical protein STK_21190 [Sulfolobus tokodaii str. 7]
Length = 164
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 64/115 (55%), Gaps = 5/115 (4%)
Query: 152 SKVV-TISPTDTVLMATKKMLELRLSSAVVTVEN-KPRGILTSKDILMRVISQNLPADST 209
+KVV I D+V A ++M + L + VV +N K GI+T +DI+ V L A
Sbjct: 10 NKVVHVIKENDSVKTAAEEMKKHNLGALVVIDDNDKIVGIITERDIVKVVAEGKLDAK-- 67
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
V+ MT N T DTPI DAL IM D F HLP++ +DG V+ +V + ++ A
Sbjct: 68 -VKDYMTRNVIGVTEDTPITDALEIMLDHGFRHLPIIGKDGKVIGIVSIRDLSKA 121
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 69/138 (50%), Gaps = 11/138 (7%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + AL++ D N + GI+T++DI V +L + V MTRN V DT
Sbjct: 29 MKKHNLGALVVIDDNDKIVGIITERDIVKVVAEGKL---DAKVKDYMTRNVIGVTEDTPI 85
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALL---DIAKCLYD---AIARMERAAEKGKAIAAA 113
+AL+ M+ FRHLP++ ++G+VI ++ D++K + D + E A KG
Sbjct: 86 TDALEIMLDHGFRHLPIIGKDGKVIGIVSIRDLSKAILDPHFFQFKKEAADVKGSGYVCP 145
Query: 114 VEGVE-KHWGTSISGPNT 130
V G+E +G G +
Sbjct: 146 VCGMEIDEYGYCGCGAGS 163
>gi|220702516|pdb|3FHM|A Chain A, Crystal Structure Of The Cbs-Domain Containing Protein
Atu1752 From Agrobacterium Tumefaciens
gi|220702517|pdb|3FHM|B Chain B, Crystal Structure Of The Cbs-Domain Containing Protein
Atu1752 From Agrobacterium Tumefaciens
gi|220702518|pdb|3FHM|C Chain C, Crystal Structure Of The Cbs-Domain Containing Protein
Atu1752 From Agrobacterium Tumefaciens
gi|220702519|pdb|3FHM|D Chain D, Crystal Structure Of The Cbs-Domain Containing Protein
Atu1752 From Agrobacterium Tumefaciens
Length = 165
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 59/111 (53%)
Query: 3 ARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVE 62
A ++ A+++TD++ ++ GI T++D+ V + + VS MT+N ++ +
Sbjct: 55 AHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGAASLQQSVSVAMTKNVVRCQHNSTTDQ 114
Query: 63 ALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113
++ M G+FRH+PV ENG + ++ I + I +E AE KA A
Sbjct: 115 LMEIMTGGRFRHVPVEENGRLAGIISIGDVVKARIGEIEAEAEHIKAYIAG 165
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 61/138 (44%), Gaps = 7/138 (5%)
Query: 136 RERMFRPSLSTIIPE-----KSKVVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGI 189
RE ++ ++T + + VVT+ P ++ A + ++ + VVT + GI
Sbjct: 14 RENLYFQGMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGI 73
Query: 190 LTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
T +D++ V Q + V MT N ++ + IM G+F H+P V+ +
Sbjct: 74 FTERDLVKAVAGQGAASLQQSVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVP-VEEN 132
Query: 250 GDVVDVVDVIHITHAAVA 267
G + ++ + + A +
Sbjct: 133 GRLAGIISIGDVVKARIG 150
>gi|196231756|ref|ZP_03130613.1| putative signal-transduction protein with CBS domains
[Chthoniobacter flavus Ellin428]
gi|196224228|gb|EDY18741.1| putative signal-transduction protein with CBS domains
[Chthoniobacter flavus Ellin428]
Length = 146
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNP-TFVLSDTL 59
MA + + AL + D LL GILT++D A +VI + ++T VS +M+R+P T +DT+
Sbjct: 34 MAEKNIGALPVVDRGRLL-GILTERDYARKVILEGKSSKDTSVSAIMSRSPITVTPADTV 92
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIA 90
E ++ M + RHLPV+E G+ + +L I
Sbjct: 93 G-ECMRIMTDKRVRHLPVMEGGDFVGILSIG 122
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 70/137 (51%), Gaps = 3/137 (2%)
Query: 143 SLSTIIPEKS-KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVIS 201
++++++ +KS + +I P TV A + M E + + V + GILT +D +VI
Sbjct: 6 TVTSLLSDKSPNIWSIKPDATVYEAIELMAEKNIGALPVVDRGRLLGILTERDYARKVIL 65
Query: 202 QNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHI 261
+ + T V +M+ +P T + + + IM D + HLPV++ GD V ++ + +
Sbjct: 66 EGKSSKDTSVSAIMSRSPITVTPADTVGECMRIMTDKRVRHLPVME-GGDFVGILSIGDV 124
Query: 262 THAAVATEI-LLDQIMR 277
++ + +DQ+ R
Sbjct: 125 VRWMISAQTATIDQLTR 141
>gi|296119585|ref|ZP_06838143.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Corynebacterium ammoniagenes DSM 20306]
gi|295967468|gb|EFG80735.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Corynebacterium ammoniagenes DSM 20306]
Length = 618
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 7/99 (7%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEET-PVSKVMTRNPTFVLSDTL 59
M V +LL+ D + LL GI+TD+D+ RV+A +E T PVS VMT + S++L
Sbjct: 178 MEEYNVSSLLVLDRDTLL-GIITDRDLRGRVVAE--GIETTCPVSDVMTTKLLTLSSESL 234
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALL---DIAKCLYD 95
A+EAL M + K HLPVV+ G V ++ DIA+ L++
Sbjct: 235 AMEALMLMSERKIHHLPVVDEGTVTGIVTQNDIARLLHN 273
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 13/119 (10%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNL----PAD 207
+K + P ++ A ++M E +SS +V + GI+T +D+ RV+++ + P
Sbjct: 160 AKPRSCPPDLSIREAAQRMEEYNVSSLLVLDRDTLLGIITDRDLRGRVVAEGIETTCPVS 219
Query: 208 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV---DVIHITH 263
+ K++T + E + +AL +M + K HLPVVD +G V +V D+ + H
Sbjct: 220 DVMTTKLLTLSSESLAM-----EALMLMSERKIHHLPVVD-EGTVTGIVTQNDIARLLH 272
>gi|84500150|ref|ZP_00998416.1| CBS [Oceanicola batsensis HTCC2597]
gi|84392084|gb|EAQ04352.1| CBS [Oceanicola batsensis HTCC2597]
Length = 142
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 6 VDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQ 65
+ AL + D LL GIL+++D+ RVI R+ + T VS+VMT P + + A+
Sbjct: 36 IGALPVLDGGKLL-GILSERDVIRRVIVRDRDPSATKVSEVMTPEPLTISAQGTLATAMG 94
Query: 66 KMVQGKFRHLPVVENGEVIALLDI 89
KM+ G FRHLPV EV+ +L +
Sbjct: 95 KMLDGGFRHLPVTRANEVVGMLSM 118
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 143 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQ 202
S+S II ++ + +P TV A + + E + + V K GIL+ +D++ RVI +
Sbjct: 5 SISEIIRNRT-LRHATPDMTVRDACRILDEHAIGALPVLDGGKLLGILSERDVIRRVIVR 63
Query: 203 NLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPV 245
+ +T V +VMTP P + + A+ M DG F HLPV
Sbjct: 64 DRDPSATKVSEVMTPEPLTISAQGTLATAMGKMLDGGFRHLPV 106
>gi|187919677|ref|YP_001888708.1| signal-transduction protein with CBS domains [Burkholderia
phytofirmans PsJN]
gi|187718115|gb|ACD19338.1| putative signal-transduction protein with CBS domains [Burkholderia
phytofirmans PsJN]
Length = 147
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + AL++TD +++ GI+T++D A +V+ + + + TPV +M++ FV D
Sbjct: 33 MAEKGIGALVVTDGDSI-AGIVTERDYARKVVLMDRSSKATPVRDIMSKAVRFVRPDQTT 91
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
+ + M + + RHLPV+EN ++ ++ I + + IA +
Sbjct: 92 DDCMALMTERRMRHLPVIENDRLVGMVSIGDLVKNIIAEQQ 132
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%)
Query: 149 PEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADS 208
P + V T+ D+V A K M E + + VVT + GI+T +D +V+ + + +
Sbjct: 12 PNNTTVFTVGADDSVYEAIKLMAEKGIGALVVTDGDSIAGIVTERDYARKVVLMDRSSKA 71
Query: 209 TLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
T V +M+ D D + +M + + HLPV++ D
Sbjct: 72 TPVRDIMSKAVRFVRPDQTTDDCMALMTERRMRHLPVIEND 112
>gi|358635153|dbj|BAL22450.1| putative signal transduction protein containing CBS domains
[Azoarcus sp. KH32C]
Length = 140
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M R A+L+ D L GI T +D A R++ + N + + VMT P + D A
Sbjct: 31 MCERHFGAVLVADRAHRLLGIFTGRD-AVRLLGDQHNPDSARLDSVMTPAPVTIAPDAHA 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
++AL+ M G FRHLPVV +G+V+ L+
Sbjct: 90 IDALRLMSDGGFRHLPVVADGKVVGLV 116
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 6/115 (5%)
Query: 144 LSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPR--GILTSKDILMRVIS 201
+S II +++ + P +V A ++M E R AV+ + R GI T +D + +
Sbjct: 6 ISDII-RNQELLMLPPDASVRRACRRMCE-RHFGAVLVADRAHRLLGIFTGRDAVRLLGD 63
Query: 202 QNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
Q+ P DS ++ VMTP P D +DAL +M DG F HLPVV DG VV +V
Sbjct: 64 QHNP-DSARLDSVMTPAPVTIAPDAHAIDALRLMSDGGFRHLPVV-ADGKVVGLV 116
>gi|325295193|ref|YP_004281707.1| signal transduction protein with CBS domains [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065641|gb|ADY73648.1| putative signal transduction protein with CBS domains
[Desulfurobacterium thermolithotrophum DSM 11699]
Length = 134
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL 210
+ KVVTI P D+V++A ++M + + S V+ +KP GI+T +DI +RV+ TL
Sbjct: 8 QRKVVTIEPEDSVMLAAQRMKDKMVGSLVILDGDKPAGIITDRDIAIRVVGTG-KTPKTL 66
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
V++VMT +P D + D L VVD++G ++ ++ +
Sbjct: 67 VKEVMTKDPITIREDASFFELTKAFRDAAVRRLIVVDKNGKLIGLISI 114
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + V +L++ D + GI+TD+DIA RV+ +T V +VMT++P + D
Sbjct: 27 MKDKMVGSLVILDGDKP-AGIITDRDIAIRVVGTG-KTPKTLVKEVMTKDPITIREDASF 84
Query: 61 VEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCL 93
E + R L VV+ NG++I L+ I L
Sbjct: 85 FELTKAFRDAAVRRLIVVDKNGKLIGLISIDDVL 118
>gi|284162404|ref|YP_003401027.1| signal transduction protein [Archaeoglobus profundus DSM 5631]
gi|284012401|gb|ADB58354.1| putative signal transduction protein with CBS domains
[Archaeoglobus profundus DSM 5631]
Length = 177
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 63/107 (58%), Gaps = 6/107 (5%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQN-LPADSTLV 211
+V T DT+L A+KKM++ + S VV + +P GI+T KDIL +V+S+N LP+ L
Sbjct: 14 EVCTARKDDTLLTASKKMIKFGVGSVVVIEDGRPIGIVTEKDILYKVVSKNKLPSKVKLK 73
Query: 212 EKVMTPNPECATID--TPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
+ + TP TI T + +A IM LPVVD +G+++ +V
Sbjct: 74 DIMSTP---LITIKPTTSLREAADIMRKRGIRRLPVVDDNGNLIGIV 117
>gi|225849609|ref|YP_002729843.1| hypothetical protein PERMA_0044 [Persephonella marina EX-H1]
gi|225646065|gb|ACO04251.1| cbs domain containing protein [Persephonella marina EX-H1]
Length = 139
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL 210
+ +V+T SP V K M + + S V+ N+P GI+T +DI +RV+ + PA+
Sbjct: 8 RKEVITASPDTPVKDVAKLMRDKNVGSVVIVENNRPVGIVTDRDIAIRVLGNDQPAEIP- 66
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
V+ +MT NP D I +AL + D PVVD DG++ +V
Sbjct: 67 VKNIMTENPVTLKEDEGIFEALERVKDVGVRRFPVVDNDGNLTGIV 112
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + V ++++ ++N + GI+TD+DIA RV+ + E PV +MT NP + D
Sbjct: 27 MRDKNVGSVVIVENNRPV-GIVTDRDIAIRVLGND-QPAEIPVKNIMTENPVTLKEDEGI 84
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLY 94
EAL+++ R PVV+N G + ++ I +Y
Sbjct: 85 FEALERVKDVGVRRFPVVDNDGNLTGIVTIDDFVY 119
>gi|389808996|ref|ZP_10205088.1| signal transduction protein [Rhodanobacter thiooxydans LCS2]
gi|388442270|gb|EIL98478.1| signal transduction protein [Rhodanobacter thiooxydans LCS2]
Length = 142
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 60/101 (59%), Gaps = 4/101 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA R+ ALL+ L+ G+++++D A +VI + + +T VS +M+ +P V DT
Sbjct: 31 MAEHRIGALLVMRGEQLV-GVMSERDYARKVILQGRSSSQTAVSDIMSGSPLTVSPDTDV 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL---DIAKCLYDAIA 98
E ++ + RHLPVV++G+V+ ++ D+ K + DA A
Sbjct: 90 FECMRLCTDSRVRHLPVVQDGKVVGVISIGDLVKAVIDAQA 130
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+ +I+P VL A K M E R+ + +V + G+++ +D +VI Q + T V
Sbjct: 15 IYSIAPEAPVLDAIKHMAEHRIGALLVMRGEQLVGVMSERDYARKVILQGRSSSQTAVSD 74
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+M+ +P + DT + + + + D + HLPVV +DG VV V+ +
Sbjct: 75 IMSGSPLTVSPDTDVFECMRLCTDSRVRHLPVV-QDGKVVGVISI 118
>gi|84515564|ref|ZP_01002926.1| Protein containing a CBS domain [Loktanella vestfoldensis SKA53]
gi|84510847|gb|EAQ07302.1| Protein containing a CBS domain [Loktanella vestfoldensis SKA53]
Length = 144
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
++ R+ ++++ L GIL+++DI + R ++ PVS++MT T + A
Sbjct: 31 LSQNRIGTVVVSGDGVTLDGILSERDIVRELGKRGVSCLSAPVSEIMTAKLTTCTTADSA 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIAR--MERAAEKG 107
LQ M +G+FRHLPV++NG +I L+ I + ++ ME+ A +G
Sbjct: 91 DLVLQMMTEGRFRHLPVMDNGTMIGLISIGDVVKARLSELSMEKDALEG 139
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVISQNLPADSTLVE 212
VV++ PTD V A + + R+ + VV+ + GIL+ +DI+ + + + S V
Sbjct: 15 VVSVKPTDMVTDAVTLLSQNRIGTVVVSGDGVTLDGILSERDIVRELGKRGVSCLSAPVS 74
Query: 213 KVMTPN-PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
++MT C T D+ + L +M +G+F HLPV+D +G ++ ++ + + A
Sbjct: 75 EIMTAKLTTCTTADSADL-VLQMMTEGRFRHLPVMD-NGTMIGLISIGDVVKA 125
>gi|220924971|ref|YP_002500273.1| putative signal transduction protein with CBS domains
[Methylobacterium nodulans ORS 2060]
gi|219949578|gb|ACL59970.1| putative signal transduction protein with CBS domains
[Methylobacterium nodulans ORS 2060]
Length = 143
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 4 RRVDALLLTDSNALLCGILTDKDIATRVIARELN-LEETPVSKVMTRNPTFVLSDTLAVE 62
R + AL+++D+ + GI++++D+ R IAR + + E PVS+ MT T E
Sbjct: 33 RGIGALVVSDAGLTVLGIISERDM-IRAIARGGSAVLEHPVSRYMTGRVITCTRSTAIEE 91
Query: 63 ALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
++ M G+FRH+PVVE G ++ L+ I + IA +E
Sbjct: 92 VMELMTDGRFRHVPVVEEGHLVGLVSIGDVVKHRIASVE 130
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 11/122 (9%)
Query: 143 SLSTIIPEKSK-VVTISPTDTVLMAT-----KKMLELRLSSAVVTVENKPRGILTSKDIL 196
S++ I+ +K + VVT+ P T+ A + + L +S A +TV GI++ +D++
Sbjct: 2 SVARILSQKGRTVVTVQPHRTLAEAAELLAERGIGALVVSDAGLTV----LGIISERDMI 57
Query: 197 MRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
+ V + MT T T I + + +M DG+F H+PVV+ +G +V +V
Sbjct: 58 RAIARGGSAVLEHPVSRYMTGRVITCTRSTAIEEVMELMTDGRFRHVPVVE-EGHLVGLV 116
Query: 257 DV 258
+
Sbjct: 117 SI 118
>gi|404400937|ref|ZP_10992521.1| hypothetical protein PfusU_14281 [Pseudomonas fuscovaginae UPB0736]
Length = 147
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + V AL + D L+ GI++++D A +VI L+ +T V ++M P +
Sbjct: 34 MAEKNVGALPVVDERGLVVGIISERDYARKVILHGLSSVKTKVCEIMN-APVITVDSHQK 92
Query: 61 VE-ALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
VE + M RHLPVVENG++I LL I + +AIA
Sbjct: 93 VETCMAIMTDRHLRHLPVVENGQLIGLLSIGDLVKEAIA 131
>gi|384217897|ref|YP_005609063.1| hypothetical protein BJ6T_42020 [Bradyrhizobium japonicum USDA 6]
gi|354956796|dbj|BAL09475.1| hypothetical protein BJ6T_42020 [Bradyrhizobium japonicum USDA 6]
Length = 142
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNP-TFVLSDTL 59
+ +++ A+L+ + + L GIL+++DI + R E PV++VMTR T +DT+
Sbjct: 30 LGEKKIGAVLVMNQSRLE-GILSERDIVRVIGERGAGALEEPVTQVMTRKVVTCKETDTV 88
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIA 90
A E ++ M GKFRHLPVV+ G+V+ L+ I
Sbjct: 89 A-ELMETMTTGKFRHLPVVDGGKVVGLISIG 118
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 13/112 (11%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNL------PA 206
+++++ P + A K + E ++ + +V +++ GIL+ +DI+ RVI + P
Sbjct: 13 QIMSVEPDAKLAAAVKLLGEKKIGAVLVMNQSRLEGILSERDIV-RVIGERGAGALEEPV 71
Query: 207 DSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+ KV+T C DT + + + M GKF HLPVVD G VV ++ +
Sbjct: 72 TQVMTRKVVT----CKETDT-VAELMETMTTGKFRHLPVVD-GGKVVGLISI 117
>gi|333909771|ref|YP_004483357.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Marinomonas posidonica
IVIA-Po-181]
gi|333479777|gb|AEF56438.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Marinomonas posidonica
IVIA-Po-181]
Length = 618
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +RV +LL+T+ + L+ GI+TD+D+ TR +A+ L L+ TP++ +MT +P + S A
Sbjct: 177 MTEKRVSSLLITEQDELI-GIVTDRDLRTRALAKGLPLD-TPIATIMTPDPIVMDSRDYA 234
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
EA+ KM++ HLPV+++ I ++
Sbjct: 235 SEAVLKMMERNVHHLPVIKDNRPIGVV 261
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 7/121 (5%)
Query: 163 VLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECA 222
+L A + M E R+SS ++T +++ GI+T +D+ R +++ LP D T + +MTP+P
Sbjct: 170 ILTAAQIMTEKRVSSLLITEQDELIGIVTDRDLRTRALAKGLPLD-TPIATIMTPDPIVM 228
Query: 223 TIDTPIVDALHIMHDGKFLHLPVV--DRDGDVVDVVDVIHI-THAAVATEILLDQIMRQQ 279
+A+ M + HLPV+ +R VV D++ +H +V L+ I +Q
Sbjct: 229 DSRDYASEAVLKMMERNVHHLPVIKDNRPIGVVSTGDIVQKESHGSV---YLISDIFKQS 285
Query: 280 A 280
+
Sbjct: 286 S 286
>gi|323529966|ref|YP_004232118.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1001]
gi|323386968|gb|ADX59058.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1001]
Length = 147
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + AL++TD + + GI+T++D A +V+ + + + TPV ++M++ FV D
Sbjct: 33 MADKGIGALVVTDGDTI-AGIVTERDYARKVVLMDRSSKATPVREIMSKAVRFVRPDQTT 91
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
+ + M + + RHLPV+EN ++ ++ I + + IA +
Sbjct: 92 DDCMALMTERRMRHLPVIENDRLVGMVSIGDLVKNIIAEQQ 132
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%)
Query: 149 PEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADS 208
P + V TI D+V A K M + + + VVT + GI+T +D +V+ + + +
Sbjct: 12 PNHTTVFTIGADDSVYEAIKLMADKGIGALVVTDGDTIAGIVTERDYARKVVLMDRSSKA 71
Query: 209 TLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
T V ++M+ D D + +M + + HLPV++ D
Sbjct: 72 TPVREIMSKAVRFVRPDQTTDDCMALMTERRMRHLPVIEND 112
>gi|336124152|ref|YP_004566200.1| cyclic nucleotide binding protein/2 CBS domains [Vibrio anguillarum
775]
gi|335341875|gb|AEH33158.1| cyclic nucleotide binding protein/2 CBS domains [Vibrio anguillarum
775]
Length = 626
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Query: 3 ARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVE 62
+ R AL++ N L G++TD+D+ RVIA L L TP+S++MT++P + SD L +E
Sbjct: 187 SHRSSALVM--DNDQLVGVVTDRDMTKRVIAAGLMLN-TPISQIMTQHPQTIQSDALLLE 243
Query: 63 ALQKMVQGKFRHLPVVENGEVIALL 87
A++ M+ R LPV+E +V+ +L
Sbjct: 244 AMEMMMLHNVRSLPVLEGEQVVGVL 268
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 68/123 (55%), Gaps = 4/123 (3%)
Query: 160 TDTVLM-ATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPN 218
+DT++ A + M+ SSA+V ++ G++T +D+ RVI+ L + T + ++MT +
Sbjct: 173 SDTLVQEAAQIMVNSHRSSALVMDNDQLVGVVTDRDMTKRVIAAGLMLN-TPISQIMTQH 231
Query: 219 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA-VATEILLDQIMR 277
P+ D +++A+ +M LPV++ + VV V+ +T + V L+ +I R
Sbjct: 232 PQTIQSDALLLEAMEMMMLHNVRSLPVLEGE-QVVGVLTATSLTEKSHVHAVFLISRIYR 290
Query: 278 QQA 280
Q++
Sbjct: 291 QES 293
>gi|260430723|ref|ZP_05784695.1| CBS domain protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260418164|gb|EEX11422.1| CBS domain protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 174
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 57/107 (53%)
Query: 4 RRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEA 63
+R+ A+++TD N L GIL+++DI R+ V +MTR D L +E
Sbjct: 65 KRIGAVVVTDQNGALQGILSERDIVRRMADTPGQTLPQSVQDLMTREVRTCTPDDLLIEV 124
Query: 64 LQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAI 110
++ M +G+FRH+PV+ +G + ++ I + + +E A + K +
Sbjct: 125 VKTMTEGRFRHMPVLRDGHLCGVITIGDVVQFRLKELEYEALRMKQM 171
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVI---SQNLPADST 209
V+ + P DT+ + + + R+ + VVT +N +GIL+ +DI+ R+ Q LP
Sbjct: 46 VIAVRPDDTIHTVVQILKDKRIGAVVVTDQNGALQGILSERDIVRRMADTPGQTLPQS-- 103
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
V+ +MT T D +++ + M +G+F H+PV+ RDG + V+ +
Sbjct: 104 -VQDLMTREVRTCTPDDLLIEVVKTMTEGRFRHMPVL-RDGHLCGVITI 150
>gi|163792664|ref|ZP_02186641.1| putative signal-transduction protein with CBS domains [alpha
proteobacterium BAL199]
gi|159182369|gb|EDP66878.1| putative signal-transduction protein with CBS domains [alpha
proteobacterium BAL199]
Length = 142
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 72/118 (61%), Gaps = 8/118 (6%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARE-LNLEETPVSKVMT-RNPTFVLSDT 58
+A +R+ ++L+ + N + GIL+++DI R +A E + PVS++MT + T + T
Sbjct: 30 LAEKRIGSILILERNKV-AGILSERDI-VRALANEGAGCLDGPVSRLMTAKVVTCTPAQT 87
Query: 59 LAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116
+A + +Q M G+FRH+PVV+NG+V ++ I + R+E A E+ + +AA V G
Sbjct: 88 IA-DVMQMMTTGRFRHVPVVDNGKVAGMISIGDVVK---WRLEEAQEEVRQMAAYVAG 141
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 144 LSTIIPEK-SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQ 202
+S I+ K S VVT P+ V A + + E R+ S ++ NK GIL+ +DI+ + ++
Sbjct: 3 VSDILKSKGSAVVTAPPSMPVADAARLLAEKRIGSILILERNKVAGILSERDIVRALANE 62
Query: 203 NLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
V ++MT T I D + +M G+F H+PVVD +G V ++ +
Sbjct: 63 GAGCLDGPVSRLMTAKVVTCTPAQTIADVMQMMTTGRFRHVPVVD-NGKVAGMISI 117
>gi|91778432|ref|YP_553640.1| signal-transduction protein [Burkholderia xenovorans LB400]
gi|385204644|ref|ZP_10031514.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. Ch1-1]
gi|91691092|gb|ABE34290.1| Signal-transduction protein containing CBS domains [Burkholderia
xenovorans LB400]
gi|385184535|gb|EIF33809.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. Ch1-1]
Length = 147
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + AL++TD +++ GI+T++D A +V+ + + + TPV +M++ FV D
Sbjct: 33 MAEKGIGALVVTDGDSI-AGIVTERDYARKVVLLDRSSKATPVRDIMSKAVRFVRPDQTT 91
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
+ + M + + RHLPV+EN ++ ++ I + + IA +
Sbjct: 92 DDCMALMTERRMRHLPVIENDRLVGMVSIGDLVKNIIAEQQ 132
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%)
Query: 149 PEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADS 208
P + V T+ D+V A K M E + + VVT + GI+T +D +V+ + + +
Sbjct: 12 PNNTTVFTVGADDSVYDAIKLMAEKGIGALVVTDGDSIAGIVTERDYARKVVLLDRSSKA 71
Query: 209 TLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
T V +M+ D D + +M + + HLPV++ D
Sbjct: 72 TPVRDIMSKAVRFVRPDQTTDDCMALMTERRMRHLPVIEND 112
>gi|23013288|ref|ZP_00053201.1| COG0517: FOG: CBS domain [Magnetospirillum magnetotacticum MS-1]
Length = 143
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNP-TFVLSDTL 59
MAA +V A+L+ D GI T++D+ + A + PV MTRNP T SDT+
Sbjct: 30 MAAFKVGAVLVVDEKDNTLGIFTERDVTRCLAAHGAPVLAEPVGDHMTRNPLTCQGSDTV 89
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113
A + M FRH+PV++NG++ ++ I + +++ R E AE +A A
Sbjct: 90 A-SVMSTMSTHHFRHMPVMDNGQMKGIVSIRDLVSNSLERAEFEAEAMRAYVTA 142
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 144 LSTIIPEK-SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPR--GILTSKDILMRVI 200
+S I+ +K +K+ I P+ ++ A + M ++ AV+ V+ K GI T +D+ +
Sbjct: 3 VSDILAKKGNKIFKILPSKAMIDAVQGMAAFKVG-AVLVVDEKDNTLGIFTERDVTRCLA 61
Query: 201 SQNLPADSTLVEKVMTPNP-ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+ P + V MT NP C DT + + M F H+PV+D +G + +V +
Sbjct: 62 AHGAPVLAEPVGDHMTRNPLTCQGSDT-VASVMSTMSTHHFRHMPVMD-NGQMKGIVSI 118
>gi|418299566|ref|ZP_12911399.1| hypothetical protein ATCR1_18605 [Agrobacterium tumefaciens
CCNWGS0286]
gi|355535031|gb|EHH04327.1| hypothetical protein ATCR1_18605 [Agrobacterium tumefaciens
CCNWGS0286]
Length = 144
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 60/113 (53%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+ A ++ ++++TD++ ++ GI T++D+ V + + VS MT+N ++
Sbjct: 32 LNAHKIGSVVVTDADGVVLGIFTERDLVKIVAGQGAASLQQSVSVAMTKNVIRCHHNSTT 91
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113
E ++ M G+FRH+PV ENG + ++ I + I +E AE KA A
Sbjct: 92 DELMEIMTGGRFRHVPVEENGRLAGIISIGDVVKARIGEIEAEAEHIKAYIAG 144
>gi|83814945|ref|YP_446606.1| hypothetical protein SRU_2508 [Salinibacter ruber DSM 13855]
gi|83756339|gb|ABC44452.1| CBS domain pair protein [Salinibacter ruber DSM 13855]
Length = 175
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 61/109 (55%)
Query: 148 IPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPAD 207
+ + V+T +PTDTV M++ + S V+T +++ GI T +D + + + +
Sbjct: 36 LQQNGDVLTATPTDTVYECIDAMVDRGIGSIVITEDDEMVGIFTERDYMRDIALKGRSSP 95
Query: 208 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
T V++VMT + A + + D L M+D + HLPVVD +G++ D++
Sbjct: 96 ETEVQEVMTEDVVTAEAEDQLRDCLDRMNDLQCRHLPVVDDEGNLADII 144
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M R + ++++T+ + ++ GI T++D + + + ET V +VMT + ++
Sbjct: 58 MVDRGIGSIVITEDDEMV-GIFTERDYMRDIALKGRSSPETEVQEVMTEDVVTAEAEDQL 116
Query: 61 VEALQKMVQGKFRHLPVVEN----GEVIALLDIAK 91
+ L +M + RHLPVV++ ++I++ D AK
Sbjct: 117 RDCLDRMNDLQCRHLPVVDDEGNLADIISMRDCAK 151
>gi|294053802|ref|YP_003547460.1| putative signal transduction protein [Coraliomargarita akajimensis
DSM 45221]
gi|293613135|gb|ADE53290.1| putative signal transduction protein with CBS domains
[Coraliomargarita akajimensis DSM 45221]
Length = 151
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
Query: 143 SLSTIIPEKSKVV-TISPTDTVLMATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVI 200
S+ +I+ EKS V ++ TV A +M R+ S +V ++ GI T +D+L+RV+
Sbjct: 7 SVVSILKEKSSSVHCVAEQVTVAEAVNEMNRQRIGSILVKADDGTVTGIFTERDVLVRVV 66
Query: 201 SQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
S +T V++VMTP+ E DT + DA+ +M + + HLP++D
Sbjct: 67 SAGRDPQATKVQEVMTPDFESIAPDTSVEDAMQLMTEQRVRHLPILD 113
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 52/90 (57%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +R+ ++L+ + + GI T++D+ RV++ + + T V +VMT + + DT
Sbjct: 35 MNRQRIGSILVKADDGTVTGIFTERDVLVRVVSAGRDPQATKVQEVMTPDFESIAPDTSV 94
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIA 90
+A+Q M + + RHLP+++ G + ++ I
Sbjct: 95 EDAMQLMTEQRVRHLPILDGGTLCGMISIG 124
>gi|167624485|ref|YP_001674779.1| hypothetical protein Shal_2564 [Shewanella halifaxensis HAW-EB4]
gi|167354507|gb|ABZ77120.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella halifaxensis HAW-EB4]
Length = 615
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RV ++L+ D+N L+ GILTDKD+ RV+A + PV + MT P + S++L
Sbjct: 176 MRTSRVSSVLVIDNNKLV-GILTDKDLRNRVLAENFD-GSLPVHQAMTTTPVTIESNSLV 233
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
EA+ M + HLPV +NG V ++
Sbjct: 234 FEAMLLMSEHNIHHLPVADNGVVTGIV 260
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL-VEK 213
+TI TV A+K M R+SS +V NK GILT KD+ RV+++N D +L V +
Sbjct: 161 LTIDMKSTVAEASKLMRTSRVSSVLVIDNNKLVGILTDKDLRNRVLAENF--DGSLPVHQ 218
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILL- 272
MT P ++ + +A+ +M + HLPV D +G V +V I + +LL
Sbjct: 219 AMTTTPVTIESNSLVFEAMLLMSEHNIHHLPVAD-NGVVTGIVTSTDILRGQSSQPLLLI 277
Query: 273 DQIMRQQ 279
+I RQ+
Sbjct: 278 GEIERQK 284
>gi|85703687|ref|ZP_01034791.1| CBS domain protein [Roseovarius sp. 217]
gi|85672615|gb|EAQ27472.1| CBS domain protein [Roseovarius sp. 217]
Length = 144
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A RR+ L+++ + GI++++DI + R + VS++MTRNP +
Sbjct: 31 LAERRIGGLVVSRDGETVDGIISERDIVRSLAVRGVVCMTETVSEMMTRNPVCCSRQDTS 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL---DIAKCLYDAIARMERAAEKG 107
L +M G+FRH+PVVE G+++ ++ D+ K + ++ ME+ A +G
Sbjct: 91 DAVLARMTDGRFRHMPVVEAGKLVGIVTIGDVVKARLEELS-MEKTALEG 139
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVISQNLPADSTL 210
S V+TI+PT V A + + E R+ VV+ + + GI++ +DI+ + + + +
Sbjct: 13 SAVITITPTTKVSEAAQILAERRIGGLVVSRDGETVDGIISERDIVRSLAVRGVVCMTET 72
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
V ++MT NP C + L M DG+F H+PVV+ G +V +V + + A
Sbjct: 73 VSEMMTRNPVCCSRQDTSDAVLARMTDGRFRHMPVVE-AGKLVGIVTIGDVVKA 125
>gi|119899436|ref|YP_934649.1| hypothetical protein azo3146 [Azoarcus sp. BH72]
gi|119671849|emb|CAL95763.1| conserved hypothetical protein [Azoarcus sp. BH72]
Length = 162
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + ++++ D N L GI T++D A +V+ + L + VS++MT NP V
Sbjct: 46 MAEFDIGSVIVVD-NERLVGIFTERDYARKVVLKGLGSRDVSVSELMTPNPCTVTPTHTV 104
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
E + M + +FRHLPVV++G ++ ++ I + +++ +
Sbjct: 105 DEVMAIMTENRFRHLPVVDHGRIVGMVTIGDMVKSVVSQQQ 145
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 4/136 (2%)
Query: 136 RERMFRPSLSTIIPEK-SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKD 194
RE ++ I+ EK S+ ++ P +V A M E + S +V + GI T +D
Sbjct: 11 REMQMTVTVRQILEEKGSRTYSVRPDCSVFEALGVMAEFDIGSVIVVDNERLVGIFTERD 70
Query: 195 ILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVD-ALHIMHDGKFLHLPVVDRDGDVV 253
+V+ + L + V ++MTPNP C T VD + IM + +F HLPVVD G +V
Sbjct: 71 YARKVVLKGLGSRDVSVSELMTPNP-CTVTPTHTVDEVMAIMTENRFRHLPVVDH-GRIV 128
Query: 254 DVVDVIHITHAAVATE 269
+V + + + V+ +
Sbjct: 129 GMVTIGDMVKSVVSQQ 144
>gi|168701145|ref|ZP_02733422.1| hypothetical protein GobsU_16589 [Gemmata obscuriglobus UQM 2246]
Length = 344
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 3 ARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVE 62
RR A++LTD+ L G+ TD D+A RE L ++P++ VMTR P + +
Sbjct: 230 GRRTGAIMLTDAAGRLSGLFTDSDLARLFENREDRLLDSPIAAVMTRAPVVIGPEVRVTV 289
Query: 63 ALQKMVQGKFRHLPVVE-NGEVIALLDI 89
AL + KF LPVV+ +G I +LDI
Sbjct: 290 ALDALKARKFSELPVVDADGRPIGMLDI 317
>gi|393769455|ref|ZP_10357977.1| signal-transduction protein [Methylobacterium sp. GXF4]
gi|392724926|gb|EIZ82269.1| signal-transduction protein [Methylobacterium sp. GXF4]
Length = 143
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLE-ETPVSKVMTRNPTFVLSDTL 59
+A +R+ AL++ ++ + GI++++DI R +AR + PVS MT + T T
Sbjct: 30 LAEKRIGALVVAHADGSVAGIISERDI-MRALARHGGATFDAPVSDHMTADVTTCGKSTT 88
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
E + M +G+FRH+PV ENG + L+ I + IA +E
Sbjct: 89 IEEVMGLMTEGRFRHVPVCENGRLAGLISIGDVVARRIATVE 130
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Query: 143 SLSTIIPEK-SKVVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILMRVI 200
+++ I+ EK S VVT+SP T+ + + E R+ + VV + GI++ +DI MR +
Sbjct: 2 TVARILAEKGSSVVTVSPDKTLEEVIQILAEKRIGALVVAHADGSVAGIISERDI-MRAL 60
Query: 201 SQNLPAD-STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD--RDGDVVDVVD 257
+++ A V MT + T I + + +M +G+F H+PV + R ++ + D
Sbjct: 61 ARHGGATFDAPVSDHMTADVTTCGKSTTIEEVMGLMTEGRFRHVPVCENGRLAGLISIGD 120
Query: 258 VI 259
V+
Sbjct: 121 VV 122
>gi|357024432|ref|ZP_09086584.1| putative signal transduction protein with CBS domains
[Mesorhizobium amorphae CCNWGS0123]
gi|355543664|gb|EHH12788.1| putative signal transduction protein with CBS domains
[Mesorhizobium amorphae CCNWGS0123]
Length = 143
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Query: 5 RVDALLLTDSNALLCGILTDKDIATRVIARELNLE-ETPVSKVMTRNPTFVLSDTLAVEA 63
R+ AL++T+ + + GIL+++DI RVIARE E PV MT + E
Sbjct: 34 RIGALVITNGDHKIVGILSERDI-VRVIAREGAAALEIPVRSAMTPKVKICNENHTVNEV 92
Query: 64 LQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAA 112
++ M +G+FRHLPV +G + ++ I + I +ER AE+ +A A
Sbjct: 93 MEIMTKGRFRHLPVERDGLLYGIVSIGDVVKRRIEDVEREAEEIRAYIA 141
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILMRVISQNLPADSTLVE 212
V+T+ P + + A + + E R+ + V+T ++K GIL+ +DI+ + + A V
Sbjct: 14 VLTLGPNEKLSEAIRILTEHRIGALVITNGDHKIVGILSERDIVRVIAREGAAALEIPVR 73
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
MTP + + + + + IM G+F HLP V+RDG + +V +
Sbjct: 74 SAMTPKVKICNENHTVNEVMEIMTKGRFRHLP-VERDGLLYGIVSI 118
>gi|421746846|ref|ZP_16184610.1| hypothetical protein B551_09076 [Cupriavidus necator HPC(L)]
gi|409774585|gb|EKN56187.1| hypothetical protein B551_09076 [Cupriavidus necator HPC(L)]
Length = 145
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+ + ++ GIL+++D A +VI + ET V +MT +V +D
Sbjct: 32 MAEKSIGALLVMEHGKIV-GILSERDYARKVILMQRTSRETFVRDIMTTAVVYVRADQTT 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
E + M Q + RHLPV+E E+I +L I + D I+
Sbjct: 91 DECMALMTQHRLRHLPVMEGDELIGMLSIGDLVKDIIS 128
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+ +I P TV A + M E + + +V K GIL+ +D +VI + T V
Sbjct: 16 IYSIQPGATVYAALQLMAEKSIGALLVMEHGKIVGILSERDYARKVILMQRTSRETFVRD 75
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
+MT D + + +M + HLPV++ D
Sbjct: 76 IMTTAVVYVRADQTTDECMALMTQHRLRHLPVMEGD 111
>gi|294508543|ref|YP_003572602.1| hypothetical protein SRM_02729 [Salinibacter ruber M8]
gi|294344872|emb|CBH25650.1| CBS domain protein [Salinibacter ruber M8]
Length = 160
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 61/109 (55%)
Query: 148 IPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPAD 207
+ + V+T +PTDTV M++ + S V+T +++ GI T +D + + + +
Sbjct: 21 LQQNGDVLTATPTDTVYDCIDAMVDRGIGSIVITEDDEMVGIFTERDYMRDIALKGRSSP 80
Query: 208 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
T V++VMT + A + + D L M+D + HLPVVD +G++ D++
Sbjct: 81 ETEVQEVMTEDVVTAEAEDQLRDCLDRMNDLQCRHLPVVDDEGNLADII 129
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M R + ++++T+ + ++ GI T++D + + + ET V +VMT + ++
Sbjct: 43 MVDRGIGSIVITEDDEMV-GIFTERDYMRDIALKGRSSPETEVQEVMTEDVVTAEAEDQL 101
Query: 61 VEALQKMVQGKFRHLPVVEN----GEVIALLDIAK 91
+ L +M + RHLPVV++ ++I++ D AK
Sbjct: 102 RDCLDRMNDLQCRHLPVVDDEGNLADIISMRDCAK 136
>gi|54022043|ref|YP_116285.1| hypothetical protein nfa790 [Nocardia farcinica IFM 10152]
gi|54013551|dbj|BAD54921.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 156
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA V +L++ D N +CGI+TD+DI + +A N TP +++ P +V +D
Sbjct: 45 MADLGVGSLVVADENERMCGIVTDRDIVVKCVAHGANPATTPAAELCEATPRWVAADADV 104
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL---DIAKCLYD 95
E L M + + +PV+EN ++ ++ D+A+ L D
Sbjct: 105 EEVLDAMENHRVKRMPVIENKRLVGMISEADLARHLDD 142
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPR-GILTSKDILMRVISQNLPADST 209
K IS DTV A + M +L + S VV EN+ GI+T +DI+++ ++ +T
Sbjct: 26 KPGAQWISKQDTVERAAQLMADLGVGSLVVADENERMCGIVTDRDIVVKCVAHGANPATT 85
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
++ P D + + L M + + +PV++
Sbjct: 86 PAAELCEATPRWVAADADVEEVLDAMENHRVKRMPVIE 123
>gi|335036447|ref|ZP_08529774.1| hypothetical protein AGRO_3780 [Agrobacterium sp. ATCC 31749]
gi|333792338|gb|EGL63708.1| hypothetical protein AGRO_3780 [Agrobacterium sp. ATCC 31749]
Length = 144
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 59/111 (53%)
Query: 3 ARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVE 62
A ++ ++++TD++ ++ GI T++D+ V + + VS MT+N ++ +
Sbjct: 34 AHKIGSVVVTDADGVVLGIFTERDLVKAVAGQGAASLQQSVSVAMTKNVVRCQHNSTTDQ 93
Query: 63 ALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113
++ M G+FRH+PV ENG + ++ I + I +E AE KA A
Sbjct: 94 LMEIMTGGRFRHVPVEENGRLAGIISIGDVVKARIGEIEAEAEHIKAYIAG 144
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 130 TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRG 188
TF++ L +R R VVT+ P ++ A + ++ S VVT + G
Sbjct: 3 TFVKDLLDRKGRD-----------VVTVGPDVSIGEAAGTLHAHKIGSVVVTDADGVVLG 51
Query: 189 ILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPV 245
I T +D++ V Q + V MT N ++ + IM G+F H+PV
Sbjct: 52 IFTERDLVKAVAGQGAASLQQSVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPV 108
>gi|345008466|ref|YP_004810820.1| hypothetical protein [Streptomyces violaceusniger Tu 4113]
gi|344034815|gb|AEM80540.1| CBS domain containing protein [Streptomyces violaceusniger Tu 4113]
Length = 139
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 6 VDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQ 65
V AL ++DSN LCGI+TD+DI IA + TPV ++ P ++ +D + L+
Sbjct: 33 VGALPVSDSNERLCGIVTDRDIVVGCIAENCDPSRTPVGQLTEGTPRWIPADADVTDVLR 92
Query: 66 KMVQGKFRHLPVVENGE----VIALLDIAKCLYD 95
+M + K R LPV++ + +I+ D+A L D
Sbjct: 93 EMEEHKIRRLPVIDQNKRLVGMISEADLAHHLSD 126
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Query: 157 ISPTDTVLMATKKMLELRLSSAVVTVEN-KPRGILTSKDILMRVISQNLPADSTLVEKVM 215
I ++VL A + M +L + + V+ N + GI+T +DI++ I++N T V ++
Sbjct: 15 IPENESVLRAAQMMRDLGVGALPVSDSNERLCGIVTDRDIVVGCIAENCDPSRTPVGQLT 74
Query: 216 TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITH 263
P D + D L M + K LPV+D++ +V ++ + H
Sbjct: 75 EGTPRWIPADADVTDVLREMEEHKIRRLPVIDQNKRLVGMISEADLAH 122
>gi|84684721|ref|ZP_01012621.1| CBS domain-containing protein [Maritimibacter alkaliphilus
HTCC2654]
gi|84667056|gb|EAQ13526.1| CBS domain-containing protein [Maritimibacter alkaliphilus
HTCC2654]
Length = 144
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
++ +V A+++++ GI++++DI + AR PVS +MT + A
Sbjct: 31 LSREKVGAVIVSEDGVHPQGIVSERDIVRELGARGTGCLTDPVSAIMTEKLIGCVPGDRA 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116
+ LQKM +G+FRH+PV++ E++ L+ I + AR+E ++ +++ + + G
Sbjct: 91 IAVLQKMTEGRFRHMPVMDGDEMVGLVSIGDVVK---ARLEELGQQAESLKSMIMG 143
>gi|386815412|ref|ZP_10102630.1| KpsF/GutQ family protein [Thiothrix nivea DSM 5205]
gi|386419988|gb|EIJ33823.1| KpsF/GutQ family protein [Thiothrix nivea DSM 5205]
Length = 324
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +++ +TD+ L GI TD D+ R + LNL+E P++ +MT + + D+LA
Sbjct: 228 MTRKKLGMTAITDTFGTLLGIFTDGDL-RRSFEKGLNLQEQPIAALMTPHCRSIDGDSLA 286
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
VEAL +M + LPVV++G V ++ + L IA
Sbjct: 287 VEALNRMQEHAITVLPVVQDGRVTGIIHMHDLLRAGIA 324
>gi|417969647|ref|ZP_12610585.1| signal transduction protein [Corynebacterium glutamicum S9114]
gi|344046060|gb|EGV41727.1| signal transduction protein [Corynebacterium glutamicum S9114]
Length = 622
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 64/103 (62%), Gaps = 4/103 (3%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL-VEK 213
++ SP T++ A KM E +SS +V ++ + +GI+T +D+ RV++++L D L V +
Sbjct: 166 ISCSPDTTIMDAAIKMDEFGVSSLLVQIDGELKGIITDRDMRSRVVAKDL--DIQLPVTE 223
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
VMT +P CAT +A+ +M + + +LP+VD DG + +V
Sbjct: 224 VMTVDPRCATSQGLAFEAMLLMSELRIHYLPIVD-DGQISGIV 265
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 10 LLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQ 69
LL + L GI+TD+D+ +RV+A++L+++ PV++VMT +P S LA EA+ M +
Sbjct: 189 LLVQIDGELKGIITDRDMRSRVVAKDLDIQ-LPVTEVMTVDPRCATSQGLAFEAMLLMSE 247
Query: 70 GKFRHLPVVENGEVIALLDIAKCL 93
+ +LP+V++G++ ++ A +
Sbjct: 248 LRIHYLPIVDDGQISGIVTAADIM 271
>gi|418352|sp|P32987.1|YBP3_ACIAM RecName: Full=Uncharacterized 17.7 kDa protein in bps2 3'region;
AltName: Full=ORF3
gi|40783|emb|CAA45529.1| unnamed protein product [Acidianus ambivalens]
Length = 164
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILMRVISQNLPADSTL 210
+KV + P T+ A K+M E L S VV +N+ GI+T +DI+ + N DS
Sbjct: 11 TKVYVVKPNVTIAEAAKEMKEHNLGSLVVIDSQNRVVGIITERDIVKA--ASNRDIDSP- 67
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
VEK MT + + T DT + DAL IM + F HLP++ +G + +V +
Sbjct: 68 VEKYMTKDVKGVTEDTEVTDALDIMLNNGFRHLPIIKSNGKLYGIVSI 115
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + +L++ DS + GI+T++DI R++ ++PV K MT++ V DT
Sbjct: 29 MKEHNLGSLVVIDSQNRVVGIITERDIVKAASNRDI---DSPVEKYMTKDVKGVTEDTEV 85
Query: 61 VEALQKMVQGKFRHLPVVE-NGE---VIALLDIAKCLYDA-IARMERAAE--KGKAIAAA 113
+AL M+ FRHLP+++ NG+ ++++ D+A+ L D + + AE KG +
Sbjct: 86 TDALDIMLNNGFRHLPIIKSNGKLYGIVSIRDLARALLDVHTMQFGKPAEEVKGTGVICP 145
Query: 114 VEGVE-KHWGTSISGPNT 130
V G+E +G G +
Sbjct: 146 VCGMEIDEYGYCGCGTGS 163
>gi|220925558|ref|YP_002500860.1| putative signal transduction protein with CBS domains
[Methylobacterium nodulans ORS 2060]
gi|219950165|gb|ACL60557.1| putative signal transduction protein with CBS domains
[Methylobacterium nodulans ORS 2060]
Length = 156
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%)
Query: 15 NALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRH 74
+ L GI++++D+ +RVIA T V VMT +P + + ++ALQKM+ G+FRH
Sbjct: 44 DGKLVGIISERDVISRVIAVGREPTATTVRAVMTPDPQTIDCENYLIDALQKMLDGQFRH 103
Query: 75 LPVVENGEVIALLDI 89
LPV+ EVI ++ +
Sbjct: 104 LPVMRGDEVIRMISM 118
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%)
Query: 162 TVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPEC 221
T+ +++ + + + V + K GI++ +D++ RVI+ +T V VMTP+P+
Sbjct: 23 TITEVCRRLQDHHVGALAVLEDGKLVGIISERDVISRVIAVGREPTATTVRAVMTPDPQT 82
Query: 222 ATIDTPIVDALHIMHDGKFLHLPVVDRD 249
+ ++DAL M DG+F HLPV+ D
Sbjct: 83 IDCENYLIDALQKMLDGQFRHLPVMRGD 110
>gi|148254227|ref|YP_001238812.1| hypothetical protein BBta_2771 [Bradyrhizobium sp. BTAi1]
gi|146406400|gb|ABQ34906.1| hypothetical protein BBta_2771 [Bradyrhizobium sp. BTAi1]
Length = 125
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RV ++L+ D + +L GI+T D A +V+ L+ ++T V +VMT NP V D
Sbjct: 9 MRDNRVRSVLVID-DGVLVGIVTQGDCAIKVLLPGLDAKQTQVGQVMTANPVTVKPDHPL 67
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
+ M Q FRHLPV++ G+V+ ++ I + + I +E +
Sbjct: 68 DGCMAMMSQRGFRHLPVLDAGKVVGVISIGDVVKNIIRDLEHNVD 112
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 163 VLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECA 222
V+ A +KM + R+ S +V + GI+T D ++V+ L A T V +VMT NP
Sbjct: 2 VVEALQKMRDNRVRSVLVIDDGVLVGIVTQGDCAIKVLLPGLDAKQTQVGQVMTANPVTV 61
Query: 223 TIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
D P+ + +M F HLPV+D G VV V+ +
Sbjct: 62 KPDHPLDGCMAMMSQRGFRHLPVLDA-GKVVGVISI 96
>gi|87306459|ref|ZP_01088606.1| hypothetical protein DSM3645_09007 [Blastopirellula marina DSM
3645]
gi|87290638|gb|EAQ82525.1| hypothetical protein DSM3645_09007 [Blastopirellula marina DSM
3645]
Length = 363
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 3 ARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVE 62
RR A++L D L GI TD D+A L + P+S VMT++P V S +E
Sbjct: 240 GRRTGAIMLVDEQGKLAGIFTDSDLARIFETGRTELLDQPISIVMTQSPKTVTSGVRVLE 299
Query: 63 ALQKMVQGKFRHLPVVEN-GEVIALLDI 89
AL + + K LPV+ + GE I +LDI
Sbjct: 300 ALSAIAKSKISELPVINDTGEPIGMLDI 327
>gi|347523753|ref|YP_004781323.1| putative signal transduction protein with CBS domains [Pyrolobus
fumarii 1A]
gi|343460635|gb|AEM39071.1| putative signal transduction protein with CBS domains [Pyrolobus
fumarii 1A]
Length = 122
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M V ++L+ D L GI T++D+A R++AR +LEE PVSK M+R+P D
Sbjct: 21 MVEHSVGSVLIVDDEGRLAGIFTERDLA-RLVARGASLEE-PVSKYMSRSPVTASPDEPL 78
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCL 93
+ KM++ RH+PVV E G + ++ I L
Sbjct: 79 AKIATKMIEHWLRHIPVVDEQGRPLGVISIRDVL 112
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSA-VVTVENKPRGILTSKDILMRVISQNLPADSTL 210
+ +VT P + V K+M+E + S +V E + GI T +D L R++++ +
Sbjct: 3 TSLVTARPEEPVREVVKRMVEHSVGSVLIVDDEGRLAGIFTERD-LARLVARGASLEEP- 60
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG---DVVDVVDVIHI 261
V K M+ +P A+ D P+ M + H+PVVD G V+ + DV+ +
Sbjct: 61 VSKYMSRSPVTASPDEPLAKIATKMIEHWLRHIPVVDEQGRPLGVISIRDVLRV 114
>gi|385802818|ref|YP_005839218.1| hypothetical protein Hqrw_1509 [Haloquadratum walsbyi C23]
gi|339728310|emb|CCC39455.1| CBS domain protein [Haloquadratum walsbyi C23]
Length = 139
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 162 TVLMATKKMLELRLSSAVVTVEN-KPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPE 220
+V A M + + S VV + +P GI TS D L VI+ +P D T V++ MT E
Sbjct: 22 SVSEAADAMRKATIKSVVVVSDGCQPAGIFTSTDAL-SVIADGVPTDETTVKEYMTTGVE 80
Query: 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
+ D + A MH+G + HLPV D DGD V ++
Sbjct: 81 TVSPDVALAAAAEQMHEGGYSHLPVADADGDGVGIL 116
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 19 CGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVV 78
GI T D A VIA + +ET V + MT V D A ++M +G + HLPV
Sbjct: 48 AGIFTSTD-ALSVIADGVPTDETTVKEYMTTGVETVSPDVALAAAAEQMHEGGYSHLPVA 106
Query: 79 E-NGEVIALL---DIAKCLYDAI 97
+ +G+ + +L DIA+ + D +
Sbjct: 107 DADGDGVGILTKTDIAEVISDPV 129
>gi|385805337|ref|YP_005841735.1| inosine-5'-monophosphate dehydrogenase-like protein V
[Fervidicoccus fontis Kam940]
gi|383795200|gb|AFH42283.1| inosine-5'-monophosphate dehydrogenase related protein V
[Fervidicoccus fontis Kam940]
Length = 142
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 52/87 (59%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + ++++ + +L GILT+KD+ T+VI +L+L++ V +M+ +V DT
Sbjct: 34 MLENNIGSVVVVNEKGVLIGILTEKDLITKVIKGKLDLKDLKVKDIMSAPVVYVEPDTPL 93
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
EA+ M K HLPVV+NG V+ ++
Sbjct: 94 YEAVALMQSKKIGHLPVVKNGRVVGII 120
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 5/112 (4%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPR-GILTSKDILMRVISQNLPADSTLVE 212
VVT+ P ++ A + MLE + S VV E GILT KD++ +VI L V+
Sbjct: 18 VVTVDPNTSLDEAVRIMLENNIGSVVVVNEKGVLIGILTEKDLITKVIKGKLDLKDLKVK 77
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV---DVIHI 261
+M+ DTP+ +A+ +M K HLPVV ++G VV ++ D+I I
Sbjct: 78 DIMSAPVVYVEPDTPLYEAVALMQSKKIGHLPVV-KNGRVVGIIATGDIISI 128
>gi|254000112|ref|YP_003052175.1| putative signal transduction protein [Methylovorus glucosetrophus
SIP3-4]
gi|313202072|ref|YP_004040730.1| signal transduction protein [Methylovorus sp. MP688]
gi|253986791|gb|ACT51648.1| putative signal transduction protein with CBS domains [Methylovorus
glucosetrophus SIP3-4]
gi|312441388|gb|ADQ85494.1| putative signal transduction protein with CBS domains [Methylovorus
sp. MP688]
Length = 142
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA RV ALL+ AL+ GI +++D A V+ + + TPVS +M+ V D
Sbjct: 31 MAEYRVGALLVMRGQALV-GIFSERDYAREVVLKGKTSKTTPVSDIMSHQVITVSPDQTV 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIA 90
E + M + RHLPV+E+G+V+ +L I
Sbjct: 90 DECMNLMSGKRIRHLPVIEHGQVVGVLSIG 119
>gi|114770297|ref|ZP_01447835.1| inosine-5'-monophosphate dehydrogenase (guaB) [Rhodobacterales
bacterium HTCC2255]
gi|114549134|gb|EAU52017.1| inosine-5'-monophosphate dehydrogenase (guaB) [alpha
proteobacterium HTCC2255]
Length = 180
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 74/140 (52%), Gaps = 14/140 (10%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ + ++++ D+ + G++T++DI +V+ +ELN +ET +S +MT NP
Sbjct: 40 MSKKNYGSVVVVDTEKKVIGVVTERDIMNKVVGKELNPKETLLSSIMTENPKLARETDDM 99
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALLD----IAKCLYDAIARMERAAEKGKAIAAAVE 115
+E L+ M +FR LPVV++ G++ A+ ++ D + +M K+IA A
Sbjct: 100 LEWLRIMSNERFRRLPVVDDQGKIKAVFTQGDFVSYTWPDLMYQM-------KSIATAT- 151
Query: 116 GVEKHWGTSISGPNTFIETL 135
V K+W + G I +L
Sbjct: 152 -VTKNWPLFLIGGGIAIYSL 170
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+T SP V A M + S VV E K G++T +DI+ +V+ + L TL+
Sbjct: 25 LTKSPDTNVFDAVNAMSKKNYGSVVVVDTEKKVIGVVTERDIMNKVVGKELNPKETLLSS 84
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDV 252
+MT NP+ A +++ L IM + +F LPVVD G +
Sbjct: 85 IMTENPKLARETDDMLEWLRIMSNERFRRLPVVDDQGKI 123
>gi|237654401|ref|YP_002890715.1| signal transduction protein with CBS domains [Thauera sp. MZ1T]
gi|237625648|gb|ACR02338.1| putative signal transduction protein with CBS domains [Thauera sp.
MZ1T]
Length = 144
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKV 214
V +S V ++M L+ S+A+VT GI T +D V++ L AD+T V V
Sbjct: 16 VGVSADTPVREVVRQMNALQRSAALVTEHGVLTGIFTERDAAFGVLAAGLDADTTPVGAV 75
Query: 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
MT NP T D P ALH+M++ H+P+VD
Sbjct: 76 MTHNPVTLTEDRPFGHALHLMYENGVRHVPIVD 108
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M A + A L+T+ + +L GI T++D A V+A L+ + TPV VMT NP + D
Sbjct: 31 MNALQRSAALVTE-HGVLTGIFTERDAAFGVLAAGLDADTTPVGAVMTHNPVTLTEDRPF 89
Query: 61 VEALQKMVQGKFRHLPVVE 79
AL M + RH+P+V+
Sbjct: 90 GHALHLMYENGVRHVPIVD 108
>gi|407780017|ref|ZP_11127265.1| hypothetical protein NA2_18570 [Nitratireductor pacificus pht-3B]
gi|407298147|gb|EKF17291.1| hypothetical protein NA2_18570 [Nitratireductor pacificus pht-3B]
Length = 143
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A + A+++T + GIL+++DI V + E+PVS VMT
Sbjct: 30 LAEHGIGAVVVTRDAGQIAGILSERDIVRAVGQNGAAVLESPVSSVMTAKVQRCREHHTV 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
E +Q M +G+FRHLPV +G + ++ I + I +ER AE
Sbjct: 90 NEVMQIMTEGRFRHLPVEHDGRIAGIISIGDVVKKRIEEVEREAE 134
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVE-NKPRGILTSKDILMRVISQNLPAD-STLV 211
VVTI+P ++ A + + E + + VVT + + GIL+ +DI+ R + QN A + V
Sbjct: 14 VVTIAPDKSLAEAAQILAEHGIGAVVVTRDAGQIAGILSERDIV-RAVGQNGAAVLESPV 72
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
VMT + + + + IM +G+F HLP V+ DG + ++ +
Sbjct: 73 SSVMTAKVQRCREHHTVNEVMQIMTEGRFRHLP-VEHDGRIAGIISI 118
>gi|110667392|ref|YP_657203.1| CBS domain-containing protein [Haloquadratum walsbyi DSM 16790]
gi|109625139|emb|CAJ51558.1| CBS domain protein [Haloquadratum walsbyi DSM 16790]
Length = 139
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 166 ATKKMLELRLSSAVVTVEN-KPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATI 224
A M + + S VV + +P GI TS D L VI+ +P D T V++ MT E +
Sbjct: 26 AADAMRKATIKSVVVVSDGCQPAGIFTSTDAL-SVIADGVPTDETTVKEYMTTGVETVSP 84
Query: 225 DTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
D + A MH+G + HLPV D DGD V ++
Sbjct: 85 DVALAAAAEQMHEGGYSHLPVADADGDGVGIL 116
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 19 CGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVV 78
GI T D A VIA + +ET V + MT V D A ++M +G + HLPV
Sbjct: 48 AGIFTSTD-ALSVIADGVPTDETTVKEYMTTGVETVSPDVALAAAAEQMHEGGYSHLPVA 106
Query: 79 E-NGEVIALL---DIAKCLYDAI 97
+ +G+ + +L DIA+ + D +
Sbjct: 107 DADGDGVGILTKTDIAEVISDPV 129
>gi|56479475|ref|YP_161064.1| hypothetical protein ebA7121 [Aromatoleum aromaticum EbN1]
gi|56315518|emb|CAI10163.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 148
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + A+L+T+ N L GI T++D A +++ + L+ +E V ++MT N +
Sbjct: 33 MAKHDIGAVLVTE-NDHLTGIFTERDYARKLVLKGLSSKEATVGELMTPNVCTITPSHTV 91
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
E + M + +FRHLPVVE G++ ++ I + I + E
Sbjct: 92 DEVMNIMTENRFRHLPVVERGKIAGIVTIGDVVKSIIVQQE 132
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 157 ISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMT 216
+SP +V A M + + + +VT + GI T +D +++ + L + V ++MT
Sbjct: 20 VSPGVSVFDALAVMAKHDIGAVLVTENDHLTGIFTERDYARKLVLKGLSSKEATVGELMT 79
Query: 217 PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
PN T + + ++IM + +F HLPVV+R G + +V +
Sbjct: 80 PNVCTITPSHTVDEVMNIMTENRFRHLPVVER-GKIAGIVTI 120
>gi|392381228|ref|YP_005030425.1| conserved protein of unknown function; cystathionine beta synthase
domain [Azospirillum brasilense Sp245]
gi|356876193|emb|CCC96950.1| conserved protein of unknown function; cystathionine beta synthase
domain [Azospirillum brasilense Sp245]
Length = 161
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 1 MAARRVDALLLTD----SNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLS 56
MA RRV ALL+T L GI T++D+A RV+A + T +++VMT +P +
Sbjct: 32 MAERRVAALLVTQDRPKGGRSLKGIFTERDLAARVVAAGRDPATTRLAEVMTASPDTLGP 91
Query: 57 DTLAVEALQKMVQGKFRHLPVVENGE 82
D A EAL M + +RHLP+ +GE
Sbjct: 92 DAHAYEALDLMERHHYRHLPITADGE 117
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 71/137 (51%), Gaps = 12/137 (8%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRG------ILTSKDILMRVISQNLPA 206
++V + P +V A M E R+++ +VT +++P+G I T +D+ RV++
Sbjct: 15 QLVCLPPEASVRDAAVLMAERRVAALLVT-QDRPKGGRSLKGIFTERDLAARVVAAGRDP 73
Query: 207 DSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVV---DRDGDVVDVVDVIHITH 263
+T + +VMT +P+ D +AL +M + HLP+ + DG V+ +V + +
Sbjct: 74 ATTRLAEVMTASPDTLGPDAHAYEALDLMERHHYRHLPITADGESDGTVMGIVSIRDLF- 132
Query: 264 AAVATEILLDQIMRQQA 280
AV L D+I ++A
Sbjct: 133 -AVVRAHLEDEIRDREA 148
>gi|115524340|ref|YP_781251.1| signal-transduction protein [Rhodopseudomonas palustris BisA53]
gi|115518287|gb|ABJ06271.1| putative signal-transduction protein with CBS domains
[Rhodopseudomonas palustris BisA53]
Length = 142
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVL-SDTL 59
+A R++ ALL+ N + GIL+++D+ + A+ + + PVS VMTR SDT+
Sbjct: 30 LADRKIGALLVMSRNKI-HGILSERDVVRVLGAKGAVVLDQPVSAVMTRKVVHCRPSDTV 88
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIA 90
+ ++ M GKFRHLPV+++GE++ L+ I
Sbjct: 89 S-SIMEVMTSGKFRHLPVIDDGELVGLISIG 118
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 13/112 (11%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQ------NLPA 206
++V + P + A K + + ++ + +V NK GIL+ +D++ RV+ + P
Sbjct: 13 QIVGVEPETLLAAAVKVLADRKIGALLVMSRNKIHGILSERDVV-RVLGAKGAVVLDQPV 71
Query: 207 DSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+ + KV+ C DT + + +M GKF HLPV+D DG++V ++ +
Sbjct: 72 SAVMTRKVV----HCRPSDT-VSSIMEVMTSGKFRHLPVID-DGELVGLISI 117
>gi|408380133|ref|ZP_11177721.1| cyclic nucleotide-binding protein [Agrobacterium albertimagni
AOL15]
gi|407745974|gb|EKF57502.1| cyclic nucleotide-binding protein [Agrobacterium albertimagni
AOL15]
Length = 608
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 3/121 (2%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKV 214
+ +PTDTV A M E +SS V + GILT++D+ RV+++ L D+T V V
Sbjct: 153 IVCAPTDTVRSAATLMRERHVSSLGVVDGGRFLGILTTRDLAGRVLAEGLDPDATAVSAV 212
Query: 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVV--DRDGDVVDVVDVIHITHAAVATEILL 272
MT +P + D LH+M + + HLPVV DR ++ D+I HA + +++
Sbjct: 213 MTADPVGLPGEALGSDILHLMLERRVGHLPVVEGDRLVGMITQTDLIRF-HAISSAQLIR 271
Query: 273 D 273
D
Sbjct: 272 D 272
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M R V +L + D L GILT +D+A RV+A L+ + T VS VMT +P + + L
Sbjct: 168 MRERHVSSLGVVDGGRFL-GILTTRDLAGRVLAEGLDPDATAVSAVMTADPVGLPGEALG 226
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
+ L M++ + HLPVVE ++ ++
Sbjct: 227 SDILHLMLERRVGHLPVVEGDRLVGMI 253
>gi|237653431|ref|YP_002889745.1| signal transduction protein with CBS domains [Thauera sp. MZ1T]
gi|237624678|gb|ACR01368.1| putative signal transduction protein with CBS domains [Thauera sp.
MZ1T]
Length = 148
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + +L+TDS+ L+ GI T++D A +V+ + L + V +MT NP V A
Sbjct: 32 MAQFDIGCVLVTDSDKLV-GIFTERDYARKVVLKGLVSRDVKVGDLMTPNPYTVGLTGTA 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEK 106
+ + M +FRH+PVVE G+V+ ++ I + + + E+ ++
Sbjct: 91 DDVMATMTAKRFRHIPVVEEGKVLGIVTIGDMVKSIVTQHEKTIKQ 136
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 157 ISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMT 216
+ PTD+V A M + + +VT +K GI T +D +V+ + L + V +MT
Sbjct: 19 VRPTDSVFDALSLMAQFDIGCVLVTDSDKLVGIFTERDYARKVVLKGLVSRDVKVGDLMT 78
Query: 217 PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
PNP + D + M +F H+PVV+ +G V+ +V +
Sbjct: 79 PNPYTVGLTGTADDVMATMTAKRFRHIPVVE-EGKVLGIVTI 119
>gi|384420129|ref|YP_005629489.1| hypothetical protein XOC_3226 [Xanthomonas oryzae pv. oryzicola
BLS256]
gi|353463042|gb|AEQ97321.1| CBS domain protein [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 142
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 62/100 (62%), Gaps = 6/100 (6%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVL-SDTL 59
MA + V A+L+ D L+ GI++++D A +V+ R+ + T V+++M+ V SDT+
Sbjct: 31 MAEKAVGAVLVMDGPRLV-GIVSERDYARKVVLRDRSSSTTSVAEIMSAEVVTVSPSDTV 89
Query: 60 AVEALQKMVQGKFRHLPVVENGE---VIALLDIAKCLYDA 96
+Q M G+FRHLPVVENG VI++ D+ K + +A
Sbjct: 90 E-RCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEA 128
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 180 VTVENKPR--GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHD 237
V V + PR GI++ +D +V+ ++ + +T V ++M+ + + + +M D
Sbjct: 39 VLVMDGPRLVGIVSERDYARKVVLRDRSSSTTSVAEIMSAEVVTVSPSDTVERCMQLMTD 98
Query: 238 GKFLHLPVVDRDGDVVDVVDVIHITHAAV-ATEILLDQIMR 277
G+F HLPVV+ +G V V+ + + A + A + +DQ+ R
Sbjct: 99 GRFRHLPVVE-NGRVQGVISIGDLVKAVIEAQQQDIDQLQR 138
>gi|397170405|ref|ZP_10493821.1| hypothetical protein AEST_15870 [Alishewanella aestuarii B11]
gi|396088072|gb|EJI85666.1| hypothetical protein AEST_15870 [Alishewanella aestuarii B11]
Length = 606
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL 210
+++ V IS V A + M E R+SS +V +N+ GILT +D+ RV++ LP +T
Sbjct: 149 QARKVAISGEQDVQQAARLMSEKRVSSLLVEDDNRLIGILTDRDLRSRVLAAGLPT-TTA 207
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDR 248
+++VMTP P + +A+ +M HLPVVD+
Sbjct: 208 IKEVMTPKPYTIEKHAYLFEAVQLMSRFNVHHLPVVDQ 245
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ +RV +LL+ D N L+ GILTD+D+ +RV+A L T + +VMT P +
Sbjct: 168 MSEKRVSSLLVEDDNRLI-GILTDRDLRSRVLAAGLP-TTTAIKEVMTPKPYTIEKHAYL 225
Query: 61 VEALQKMVQGKFRHLPVVENG 81
EA+Q M + HLPVV+ G
Sbjct: 226 FEAVQLMSRFNVHHLPVVDQG 246
>gi|358410681|gb|AEU10067.1| hypothetical protein PDP_0321 [Photobacterium damselae subsp.
piscicida]
Length = 620
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 15 NALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRH 74
N + GI+TD+D+ RVIA ++++ +P+++VMTR+P + S L ++A+ M++ R
Sbjct: 195 NQQIIGIITDRDMTKRVIADGVSID-SPITQVMTRHPYTIGSQDLVLKAVGLMMEHNIRS 253
Query: 75 LPVVENGEVIALL 87
LPVV+N +V+ LL
Sbjct: 254 LPVVDNQQVVGLL 266
>gi|344338506|ref|ZP_08769438.1| putative signal transduction protein with CBS domains [Thiocapsa
marina 5811]
gi|343801788|gb|EGV19730.1| putative signal transduction protein with CBS domains [Thiocapsa
marina 5811]
Length = 143
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA +++ ALL+ D A++ G+++++D A VI R +ET VS VMT +
Sbjct: 31 MAEKQIGALLVMDDGAMI-GLISERDYARSVILRGRTSKETLVSDVMTERVVCTQPEQTL 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIA 90
EA+ M + + RHLPV+ +G+VI L+ I
Sbjct: 90 EEAMALMTEKRVRHLPVIADGKVIGLISIG 119
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
S+V +I P +V A M E ++ + +V + G+++ +D VI + + TLV
Sbjct: 13 SQVWSIGPDASVYDALVLMAEKQIGALLVMDDGAMIGLISERDYARSVILRGRTSKETLV 72
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
VMT C + + +A+ +M + + HLPV+ DG V+ ++ +
Sbjct: 73 SDVMTERVVCTQPEQTLEEAMALMTEKRVRHLPVI-ADGKVIGLISI 118
>gi|154246304|ref|YP_001417262.1| signal-transduction protein [Xanthobacter autotrophicus Py2]
gi|154160389|gb|ABS67605.1| putative signal-transduction protein with CBS domains [Xanthobacter
autotrophicus Py2]
Length = 143
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 59/106 (55%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A RR+ A+++ D + GI++++D+ + + +N+ P+S VMTR D
Sbjct: 30 LAGRRIGAIVVVDDAMSVEGIISERDVVRLIGEQGVNVLAEPLSSVMTRAVVTCTPDETV 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEK 106
+++M +G+FRH+PVV +++ ++ I + + MER + +
Sbjct: 90 PVIMERMTRGRFRHVPVVSGDKLVGIISIGDVVKFRVEEMERESAQ 135
>gi|84503059|ref|ZP_01001155.1| CBS domain protein [Oceanicola batsensis HTCC2597]
gi|84388603|gb|EAQ01475.1| CBS domain protein [Oceanicola batsensis HTCC2597]
Length = 144
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
++ R+ ++++ S GIL+++DI + R E ++MTR+P A
Sbjct: 31 LSENRIGGVVVSTSGDTAEGILSERDIVRALSRRGPTCLEDRAEEMMTRDPVCCQRRDTA 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL---DIAKCLYDAIARMERAAEKG 107
E L++M G+FRH+PVVE+G++I ++ D+ K + ++ MER A +G
Sbjct: 91 DEVLRRMTDGRFRHMPVVEDGKLIGIVTIGDVVKARLNELS-MERDALEG 139
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVV-TVENKPRGILTSKDILMRVISQNLPAD-STLV 211
VVT++P V + + E R+ VV T + GIL+ +DI+ R +S+ P
Sbjct: 15 VVTVTPDTPVSQVAQVLSENRIGGVVVSTSGDTAEGILSERDIV-RALSRRGPTCLEDRA 73
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
E++MT +P C + L M DG+F H+PVV+ DG ++ +V + + A
Sbjct: 74 EEMMTRDPVCCQRRDTADEVLRRMTDGRFRHMPVVE-DGKLIGIVTIGDVVKA 125
>gi|313679251|ref|YP_004056990.1| signal transduction protein with cbs domains [Oceanithermus
profundus DSM 14977]
gi|313151966|gb|ADR35817.1| putative signal transduction protein with CBS domains
[Oceanithermus profundus DSM 14977]
Length = 146
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA V AL + D++ + G+ +++D A +VI R ++ PVS++M+ + ++ +T
Sbjct: 31 MAEYNVGALPVVDASGQIVGLFSERDYARKVILRGKASKDIPVSEIMSTHVLYITPETTD 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL---DIAKCLYDA----IARMERAAEKG 107
+ + M + RHLPV+E G ++ + D+ K + D I ++E+ ++G
Sbjct: 91 WQCMALMTDKRVRHLPVLEEGRLVGFISIGDVVKSIMDEQKFHIEQLEQYIQRG 144
>gi|330835097|ref|YP_004409825.1| signal transduction protein [Metallosphaera cuprina Ar-4]
gi|329567236|gb|AEB95341.1| signal transduction protein [Metallosphaera cuprina Ar-4]
Length = 269
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 118/281 (41%), Gaps = 49/281 (17%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRV--IARELNLEETPVSKVMTRNPTFVLSDT 58
MA + ++ D N GI+T KDI V + E +LEE +S+VM ++ V
Sbjct: 23 MAVESIPKSIVIDENGSPIGIITQKDIVKFVHSMGEERSLEEVMLSEVMRKDVICVNPSI 82
Query: 59 LAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG-V 117
+A Q M+ K L V C E+ KA+ ++ +
Sbjct: 83 DPFDAAQIMIDKKQPLLAV--------------C-----------NEEEKAVGMIIKSDL 117
Query: 118 EKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSS 177
+ + + G ++ +RE M P VVTI P+D + +A ++++ LS
Sbjct: 118 SNFYASQVKG----LQKVRELMSSP-----------VVTIEPSDKLGVAVERLVSSNLSR 162
Query: 178 AVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHD 237
VV + G++T+ D+L + V VM+PN + + +A +M
Sbjct: 163 LVVQTNGRVVGVVTTTDLLYVAPALKFKDSKIEVRDVMSPNVIVVDSNEDMANAARLMAS 222
Query: 238 GKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILLDQIMRQ 278
K +P+V++DG + +V + A L+DQ +++
Sbjct: 223 RKIKGIPIVEKDGKLAGIVTTTDVVRA------LMDQSVKK 257
>gi|56697064|ref|YP_167427.1| hypothetical protein SPO2201 [Ruegeria pomeroyi DSS-3]
gi|56678801|gb|AAV95467.1| CBS domain protein [Ruegeria pomeroyi DSS-3]
Length = 144
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A +R+ ++++D GIL+++DI + A PVS MT++ D
Sbjct: 31 LAEKRIGTVVVSDDGETAQGILSERDIVRELAASGSGCLSEPVSTYMTKDLITCGRDAKV 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIAR--MERAAEKG 107
+ L +M +G+FRH+PV+E G+++ L+ + + +A ME+ A +G
Sbjct: 91 QDVLSQMTEGRFRHMPVIEEGKLVGLVTLGDVVKAQLAELAMEKDALEG 139
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 5/120 (4%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENK-PRGILTSKDILMRVISQNLPADSTLVE 212
VVT+S TV A + E R+ + VV+ + + +GIL+ +DI+ + + S V
Sbjct: 15 VVTVSAAATVAQAAAILAEKRIGTVVVSDDGETAQGILSERDIVRELAASGSGCLSEPVS 74
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV---DVIHITHAAVATE 269
MT + D + D L M +G+F H+PV++ +G +V +V DV+ A +A E
Sbjct: 75 TYMTKDLITCGRDAKVQDVLSQMTEGRFRHMPVIE-EGKLVGLVTLGDVVKAQLAELAME 133
>gi|168704059|ref|ZP_02736336.1| CBS domain containing protein [Gemmata obscuriglobus UQM 2246]
Length = 133
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 5 RVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNP-TFVLSDTLAVEA 63
R A+L+T L GILT++D T+ E PV + MT P T +DTLA A
Sbjct: 38 RTGAVLVTGPGGELVGILTERDFLTKKTGAP-GFEARPVREFMTLAPETVTPTDTLAF-A 95
Query: 64 LQKMVQGKFRHLPVVENGEVIALLDI 89
L KM G +RHLPVVE G + ++ +
Sbjct: 96 LGKMDAGAYRHLPVVEGGRPVGVISV 121
>gi|448312555|ref|ZP_21502297.1| signal transduction protein with CBS domains [Natronolimnobius
innermongolicus JCM 12255]
gi|445601006|gb|ELY55000.1| signal transduction protein with CBS domains [Natronolimnobius
innermongolicus JCM 12255]
Length = 144
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
Query: 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVIS 201
P + TI+ + +VV+ +P + + +M E R+ S V+ ++PRGI+T +DI + V+S
Sbjct: 2 PQIRTIV--REEVVSAAPDEPLTELADRMDEKRVGSVVIVENDEPRGIVTDRDITLEVVS 59
Query: 202 QNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG 250
+ S + VM+ + D+ I D L M D +P +D DG
Sbjct: 60 RGEDPASVTADDVMSDDLVTVDADSGIFDVLRAMEDASVRRVPAIDTDG 108
>gi|365891070|ref|ZP_09429537.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
gi|365333005|emb|CCE02068.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
Length = 125
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RV ++L+ D + +L GI+T D A +V+ L+ ++TPV++VMT NP V D
Sbjct: 9 MRDNRVRSVLVMD-DGVLVGIVTQGDCAIKVLLPGLDAKQTPVAQVMTANPVTVKPDHPL 67
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
+ M + FRHLPV++ +V+ ++ I + + I +E +
Sbjct: 68 DGCMAMMSRRGFRHLPVLDGTKVVGVISIGDVVKNIIRDLEHNVD 112
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%)
Query: 163 VLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECA 222
V+ A +KM + R+ S +V + GI+T D ++V+ L A T V +VMT NP
Sbjct: 2 VVEALQKMRDNRVRSVLVMDDGVLVGIVTQGDCAIKVLLPGLDAKQTPVAQVMTANPVTV 61
Query: 223 TIDTPIVDALHIMHDGKFLHLPVVD 247
D P+ + +M F HLPV+D
Sbjct: 62 KPDHPLDGCMAMMSRRGFRHLPVLD 86
>gi|126735621|ref|ZP_01751366.1| CBS domain protein [Roseobacter sp. CCS2]
gi|126714808|gb|EBA11674.1| CBS domain protein [Roseobacter sp. CCS2]
Length = 144
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
++ R+ ++++ L GIL+++DI + R + PV +MT T A
Sbjct: 31 LSKHRIGTVVVSADGETLDGILSERDIVRELGKRGMGCLNDPVRDLMTAKLTTCGPSNNA 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIAR--MERAAEKG 107
+E L+ M G+FRHLPV++NG+++ L+ I + +A+ ME+ + +G
Sbjct: 91 LEVLEIMTAGRFRHLPVMDNGKMVGLISIGDAVKGRLAQLAMEKESLEG 139
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVISQNLPADSTLVE 212
V+++ PT TV A K + + R+ + VV+ + + GIL+ +DI+ + + + + V
Sbjct: 15 VISVKPTATVTDAAKLLSKHRIGTVVVSADGETLDGILSERDIVRELGKRGMGCLNDPVR 74
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+MT ++ L IM G+F HLPV+D +G +V ++ +
Sbjct: 75 DLMTAKLTTCGPSNNALEVLEIMTAGRFRHLPVMD-NGKMVGLISI 119
>gi|375146265|ref|YP_005008706.1| putative signal transduction protein with CBS domains [Niastella
koreensis GR20-10]
gi|361060311|gb|AEV99302.1| putative signal transduction protein with CBS domains [Niastella
koreensis GR20-10]
Length = 143
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 55/99 (55%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+ ++ + +L++ + L GI T++D A +VI + + +ET V +MT +P FV DT
Sbjct: 31 LESKNLGSLVVLEECGKLDGIFTERDYARKVILKGRSSKETRVMDIMTESPVFVTPDTKI 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIAR 99
+Q M RHLPV+++ E++ L+ I + I R
Sbjct: 91 DYCMQLMTDKHIRHLPVLDDNELVGLISIGDLVKHIIDR 129
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVE-NKPRGILTSKDILMRVISQNLPADSTLVE 212
V T++P +V A + + L S VV E K GI T +D +VI + + T V
Sbjct: 15 VYTVNPESSVYEALETLESKNLGSLVVLEECGKLDGIFTERDYARKVILKGRSSKETRVM 74
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+MT +P T DT I + +M D HLPV+D D ++V ++ +
Sbjct: 75 DIMTESPVFVTPDTKIDYCMQLMTDKHIRHLPVLD-DNELVGLISI 119
>gi|288939928|ref|YP_003442168.1| cyclic nucleotide-binding protein [Allochromatium vinosum DSM 180]
gi|288895300|gb|ADC61136.1| cyclic nucleotide-binding protein [Allochromatium vinosum DSM 180]
Length = 621
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ V +LL+ D L G++TD+D+ R +A L ++ PV +MT T V DTL
Sbjct: 180 MSEHHVSSLLIMDGEHL-AGMITDRDLRNRCVAAGLATDQ-PVRAIMTEKLTTVDMDTLG 237
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
+AL M + HLPVVENG V+ L+
Sbjct: 238 FQALIAMTRLNVHHLPVVENGRVVGLI 264
>gi|372278663|ref|ZP_09514699.1| CBS domain-containing protein [Oceanicola sp. S124]
Length = 173
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%)
Query: 5 RVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEAL 64
R+ ALL+TD +A L GIL+++DI ++ V +VMTR D L + L
Sbjct: 65 RIGALLVTDIDAKLVGILSERDIVRKLADAPGRTLPHRVEEVMTRAVETCAPDDLLRDVL 124
Query: 65 QKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
Q+M G+FRH+PV+E + L+ I ++ + ++E
Sbjct: 125 QRMTDGRFRHMPVLEEQHLTGLVTIGDLVHFRLRQLE 161
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 9/114 (7%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILMRVI---SQNLPADST 209
+ TISP T+ A + + + R+ + +VT ++ K GIL+ +DI+ ++ + LP
Sbjct: 45 LYTISPEQTLHRAVEMLRDHRIGALLVTDIDAKLVGILSERDIVRKLADAPGRTLPHR-- 102
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG--DVVDVVDVIHI 261
VE+VMT E D + D L M DG+F H+PV++ +V + D++H
Sbjct: 103 -VEEVMTRAVETCAPDDLLRDVLQRMTDGRFRHMPVLEEQHLTGLVTIGDLVHF 155
>gi|281202067|gb|EFA76272.1| hypothetical protein PPL_10033 [Polysphondylium pallidum PN500]
Length = 240
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 52/90 (57%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +V AL++ D+ + GI +++D R++ ++L+ T + VM+ + V +DT
Sbjct: 118 MQKHKVGALVVVDAENRMTGIFSERDYMNRIVVKDLSSRTTYIKDVMSPHVVTVRTDTST 177
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIA 90
+ + M++ FRHLPVVE +++ +L I
Sbjct: 178 AKCMSIMIKRGFRHLPVVEGEKLVGILSIG 207
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 154 VVTISPTDTVLMATKKMLELRLSS-AVVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
++ + DTV A + M + ++ + VV EN+ GI + +D + R++ ++L + +T ++
Sbjct: 102 IIKVKEGDTVFNAIQTMQKHKVGALVVVDAENRMTGIFSERDYMNRIVVKDLSSRTTYIK 161
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
VM+P+ DT + IM F HLPVV+
Sbjct: 162 DVMSPHVVTVRTDTSTAKCMSIMIKRGFRHLPVVE 196
>gi|55980786|ref|YP_144083.1| hypothetical protein TTHA0817 [Thermus thermophilus HB8]
gi|55772199|dbj|BAD70640.1| CBS domain protein [Thermus thermophilus HB8]
Length = 585
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 77/144 (53%), Gaps = 7/144 (4%)
Query: 137 ERMFRPSLSTIIPE--KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKD 194
ER+ P L+ + E + V + PT +V A ++M E +SS + V +P GILT +D
Sbjct: 129 ERVLEPGLARPVGELVQRPPVFVDPTASVEEAARRMREEGISS--LLVRGEPLGILTDRD 186
Query: 195 ILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVD 254
+ RV+++ LP ST V +V T DTP+++A+ M + + HLP+ R +VV
Sbjct: 187 LRNRVLAEGLP-PSTPVGQVATRPTFTLPADTPLLEAVAAMLERRIHHLPLT-RGEEVVG 244
Query: 255 VVDVIH-ITHAAVATEILLDQIMR 277
VV + H A + LL ++ R
Sbjct: 245 VVTHTDLLAHQAQSPLALLRRVER 268
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 20 GILTDKDIATRVIARELNLEETPVSKVMTRNPTFVL-SDTLAVEALQKMVQGKFRHLPVV 78
GILTD+D+ RV+A L TPV +V TR PTF L +DT +EA+ M++ + HLP+
Sbjct: 180 GILTDRDLRNRVLAEGLP-PSTPVGQVATR-PTFTLPADTPLLEAVAAMLERRIHHLPLT 237
Query: 79 ENGEVIA 85
EV+
Sbjct: 238 RGEEVVG 244
>gi|375111665|ref|ZP_09757869.1| hypothetical protein AJE_16894 [Alishewanella jeotgali KCTC 22429]
gi|374568301|gb|EHR39480.1| hypothetical protein AJE_16894 [Alishewanella jeotgali KCTC 22429]
Length = 606
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL 210
+++ V IS V A + M E R+SS +V +N+ GILT +D+ RV++ LP +T
Sbjct: 149 QARKVAISGEQDVQQAARLMSEKRVSSLLVEDDNRLIGILTDRDLRSRVLAAGLPP-TTA 207
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDR 248
+++VMTP P + +A+ +M HLPVVD+
Sbjct: 208 IKEVMTPKPYTIEKHAYLFEAVQLMSRFNVHHLPVVDQ 245
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ +RV +LL+ D N L+ GILTD+D+ +RV+A L T + +VMT P +
Sbjct: 168 MSEKRVSSLLVEDDNRLI-GILTDRDLRSRVLAAGLP-PTTAIKEVMTPKPYTIEKHAYL 225
Query: 61 VEALQKMVQGKFRHLPVVENG 81
EA+Q M + HLPVV+ G
Sbjct: 226 FEAVQLMSRFNVHHLPVVDQG 246
>gi|319763071|ref|YP_004127008.1| CBS domain-containing protein [Alicycliphilus denitrificans BC]
gi|330825150|ref|YP_004388453.1| signal transduction protein [Alicycliphilus denitrificans K601]
gi|317117632|gb|ADV00121.1| CBS domain containing protein [Alicycliphilus denitrificans BC]
gi|329310522|gb|AEB84937.1| putative signal transduction protein with CBS domains
[Alicycliphilus denitrificans K601]
Length = 145
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+ + + GI T++D A +V+ +TPV +VMTR FV A
Sbjct: 32 MAEKHIGALLVMEGEQI-AGIFTERDYARKVVLLGRASVDTPVREVMTRAVRFVHPSHSA 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
+ + M + + RHLPVV+ G V+ L+ I + I+ +
Sbjct: 91 EQCMALMTENRLRHLPVVDEGRVVGLVSIGDLVKSVISEQQ 131
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
++V ++P+DTVL A + M E + + +V + GI T +D +V+ + T V
Sbjct: 14 AQVHCVAPSDTVLAALRLMAEKHIGALLVMEGEQIAGIFTERDYARKVVLLGRASVDTPV 73
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+VMT + +M + + HLPVVD +G VV +V +
Sbjct: 74 REVMTRAVRFVHPSHSAEQCMALMTENRLRHLPVVD-EGRVVGLVSI 119
>gi|94499933|ref|ZP_01306468.1| CBS domain protein [Bermanella marisrubri]
gi|94427791|gb|EAT12766.1| CBS domain protein [Oceanobacter sp. RED65]
Length = 620
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ R+ ++L+ +++ LL GI+TD+DI +R +A+ L+ E VS +MT P ++ +
Sbjct: 180 MSEERISSMLIMENDRLL-GIVTDRDIRSRAVAQSLSYE-AEVSVIMTEQPKYIEASKSL 237
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
+A M Q HLPV E+G+++ ++
Sbjct: 238 FDATLYMTQSGIHHLPVQEDGKIVGVI 264
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
+V +I+P ++ +M E R+SS ++ ++ GI+T +DI R ++Q+L ++ V
Sbjct: 162 GEVFSITPNTSIQSCAAQMSEERISSMLIMENDRLLGIVTDRDIRSRAVAQSLSYEAE-V 220
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEIL 271
+MT P+ + DA M HLPV + DG +V V+ + A +
Sbjct: 221 SVIMTEQPKYIEASKSLFDATLYMTQSGIHHLPVQE-DGKIVGVISASDLMIAKQDDPVY 279
Query: 272 LDQ-IMRQQ 279
L Q I RQQ
Sbjct: 280 LVQHISRQQ 288
>gi|146339957|ref|YP_001205005.1| hypothetical protein BRADO2961 [Bradyrhizobium sp. ORS 278]
gi|146192763|emb|CAL76768.1| conserved hypothetical protein with 2 CBS domains [Bradyrhizobium
sp. ORS 278]
Length = 142
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A R++ A+L+ S + GIL+++DI + R PVS VMTR
Sbjct: 30 LADRKIGAVLVM-SGTRMEGILSERDIVRSLGERGAGALTEPVSSVMTRRVVSCRPQDTV 88
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIA 90
E ++ M GKFRHLPV+E G V+ L+ I
Sbjct: 89 AEIMEMMTNGKFRHLPVIEGGLVVGLISIG 118
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
KV ++ T+ A K + + ++ + +V + GIL+ +DI+ + + A + V
Sbjct: 13 KVESVEAQTTLAEAAKLLADRKIGAVLVMSGTRMEGILSERDIVRSLGERGAGALTEPVS 72
Query: 213 KVMTPNP-ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
VMT C DT + + + +M +GKF HLPV++ G VV ++ +
Sbjct: 73 SVMTRRVVSCRPQDT-VAEIMEMMTNGKFRHLPVIE-GGLVVGLISI 117
>gi|448356790|ref|ZP_21545510.1| signal transduction protein [Natrialba chahannaoensis JCM 10990]
gi|445652125|gb|ELZ05026.1| signal transduction protein [Natrialba chahannaoensis JCM 10990]
Length = 405
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 8/181 (4%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPV 77
L G++T DI V + L+ VS+ + + + D+ EA+ + HLPV
Sbjct: 101 LHGVVTVNDILEAV---QPYLDAATVSEAASTDLRTLSPDSRLGEAVNTFREHHITHLPV 157
Query: 78 VENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFI--ETL 135
VE+G + +L + D R E ++ G A G E T+ + F E
Sbjct: 158 VEDGTTVGILSLYDVT-DLTVRAEVQSQGGDAGGVDPFGGEISSSTARARRGGFGAREGE 216
Query: 136 RERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDI 195
RERM + ++ + V T+SP++T+ +A ++M E+ SS VVT + P GI+T D+
Sbjct: 217 RERMLDLPIRDVM--TTPVRTVSPSETLEVAVEEMFEIDASSLVVTDDGSPHGIVTKTDV 274
Query: 196 L 196
L
Sbjct: 275 L 275
>gi|413964852|ref|ZP_11404078.1| putative signal-transduction protein with CBS domain [Burkholderia
sp. SJ98]
gi|413927526|gb|EKS66815.1| putative signal-transduction protein with CBS domain [Burkholderia
sp. SJ98]
Length = 146
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + A+++T+ + ++ GI+T++D A +V+ + + TPV +MT + +V D
Sbjct: 32 MADKHIGAVIVTEGDEIV-GIMTERDYARKVVLMDRVSKHTPVRDIMTSHVRYVRPDQTT 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEK 106
+ + M + RHLPV++NG +I ++ I + + +A + ++
Sbjct: 91 DDCMALMTDKRMRHLPVIDNGRLIGMISIGDLVKNIMAEQQYTIQQ 136
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 149 PEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADS 208
P+++ V T+ T +V A K M + + + +VT ++ GI+T +D +V+ + +
Sbjct: 12 PDQT-VFTVPATASVFDAIKLMADKHIGAVIVTEGDEIVGIMTERDYARKVVLMDRVSKH 70
Query: 209 TLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
T V +MT + D D + +M D + HLPV+D
Sbjct: 71 TPVRDIMTSHVRYVRPDQTTDDCMALMTDKRMRHLPVID 109
>gi|307945500|ref|ZP_07660836.1| signal-transduction protein [Roseibium sp. TrichSKD4]
gi|307771373|gb|EFO30598.1| signal-transduction protein [Roseibium sp. TrichSKD4]
Length = 143
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A ++ A+++ D + GI++++DI + E PVS+VMT++ +D +
Sbjct: 30 LAEHKIGAIVIADDAGHIEGIISERDIVKAIGTSGPTALEKPVSEVMTKS-VVTCTDADS 88
Query: 61 VEA-LQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEK 106
V A + KM G+FRH+PV ++G+V ++ I + IA+ E AE+
Sbjct: 89 VNAVMAKMSAGRFRHVPVTDDGKVTGVISIGDVVKFKIAQAEMEAEQ 135
>gi|414174488|ref|ZP_11428892.1| hypothetical protein HMPREF9695_02538 [Afipia broomeae ATCC 49717]
gi|410888317|gb|EKS36120.1| hypothetical protein HMPREF9695_02538 [Afipia broomeae ATCC 49717]
Length = 142
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMT-RNPTFVLSDTL 59
++ RR+ A+L+ S + GIL+++D+ + R + E PV VMT + T +DT+
Sbjct: 30 LSERRIGAVLVM-SGQKIDGILSERDVVRVLGERGAGVLEEPVRSVMTPKVITCRETDTV 88
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
++ M GKFRHLPVVEN ++ L+ I + +A ER E
Sbjct: 89 GA-IMEVMTSGKFRHLPVVENDRIVGLISIGDVVKWRVAEFEREQE 133
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
+V+++SP + A K + E R+ + +V K GIL+ +D++ + + V
Sbjct: 13 QVISVSPETKLSAAIKILSERRIGAVLVMSGQKIDGILSERDVVRVLGERGAGVLEEPVR 72
Query: 213 KVMTPNP-ECATIDTPIVDALHIMHDGKFLHLPVVDRD--------GDVV 253
VMTP C DT + + +M GKF HLPVV+ D GDVV
Sbjct: 73 SVMTPKVITCRETDT-VGAIMEVMTSGKFRHLPVVENDRIVGLISIGDVV 121
>gi|407710796|ref|YP_006794660.1| hypothetical protein BUPH_06076 [Burkholderia phenoliruptrix
BR3459a]
gi|407239479|gb|AFT89677.1| CBS domain-containing protein [Burkholderia phenoliruptrix BR3459a]
Length = 147
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + AL++T+ + + GI+T++D A +V+ + + + TPV ++M++ FV D
Sbjct: 33 MADKGIGALVVTEGDTI-AGIVTERDYARKVVLMDRSSKATPVREIMSKAVRFVRPDQTT 91
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
+ + M + + RHLPV+EN ++ ++ I + + IA +
Sbjct: 92 DDCMALMTERRMRHLPVIENDRLVGMVSIGDLVKNIIAEQQ 132
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%)
Query: 149 PEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADS 208
P + V TI D+V A K M + + + VVT + GI+T +D +V+ + + +
Sbjct: 12 PNHTTVFTIGADDSVYEAIKLMADKGIGALVVTEGDTIAGIVTERDYARKVVLMDRSSKA 71
Query: 209 TLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
T V ++M+ D D + +M + + HLPV++ D
Sbjct: 72 TPVREIMSKAVRFVRPDQTTDDCMALMTERRMRHLPVIEND 112
>gi|398903957|ref|ZP_10651979.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM50]
gi|398176386|gb|EJM64105.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM50]
Length = 146
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 59/100 (59%), Gaps = 5/100 (5%)
Query: 1 MAARRVDAL-LLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTL 59
MAA+ V AL +L D + GI++++D A +++ + + TPVS +M +P +
Sbjct: 34 MAAKNVGALPVLKDGK--VVGIISERDYARKLVLKGRSSVGTPVSDIMV-SPVITVDTHQ 90
Query: 60 AVE-ALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
VE + M + + RHLPVVENGE+I LL I + +AIA
Sbjct: 91 TVETCMGIMSEKRLRHLPVVENGELIGLLSIGDLVKEAIA 130
>gi|25027940|ref|NP_737994.1| hypothetical protein CE1384 [Corynebacterium efficiens YS-314]
gi|23493223|dbj|BAC18194.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
Length = 621
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 10 LLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQ 69
LL ++ L GI TD+D+ RV+A L++ + PVS +MT NP S LA EA+ M +
Sbjct: 188 LLIQTDGELIGIATDRDMRGRVVAAALDITQ-PVSTIMTSNPRTATSQDLAFEAMLLMAE 246
Query: 70 GKFRHLPVVENGEVIALLDIAKCL 93
+ HLP+V+ G + ++ A +
Sbjct: 247 LRIHHLPIVDEGRISGIVTAADIM 270
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKV 214
+++ P ++ A + M +SS ++ + + GI T +D+ RV++ L + V +
Sbjct: 165 ISVGPGTSIREAAQTMERYAVSSLLIQTDGELIGIATDRDMRGRVVAAALDI-TQPVSTI 223
Query: 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVD--RDGDVVDVVDVIHI 261
MT NP AT +A+ +M + + HLP+VD R +V D++ +
Sbjct: 224 MTSNPRTATSQDLAFEAMLLMAELRIHHLPIVDEGRISGIVTAADIMRL 272
>gi|374315236|ref|YP_005061664.1| hypothetical protein [Sphaerochaeta pleomorpha str. Grapes]
gi|359350880|gb|AEV28654.1| CBS-domain-containing membrane protein [Sphaerochaeta pleomorpha
str. Grapes]
Length = 147
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIAR--ELNLEETPVSKVMTRNPTFVLSDT 58
+ ++ ALL+ D + GIL+++DI + LN +S+VMT+ T+V
Sbjct: 31 LTEHKIGALLVLDERGAIKGILSERDIVKHFSRKTEHLNTAAIKISEVMTKGVTYVKPHQ 90
Query: 59 LAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAI 97
+ LQ M G+FRHLPV+E+ +V+ ++ I + A+
Sbjct: 91 SLEDCLQLMTAGRFRHLPVMEDDKVVGMISIGDVVKAAL 129
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 74/138 (53%), Gaps = 6/138 (4%)
Query: 143 SLSTIIPEK-SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVI 200
++ +I+ +K SKV +I P DT+ A ++ E ++ + +V E +GIL+ +DI+
Sbjct: 3 NVQSILDQKGSKVFSIKPDDTLSHALLQLTEHKIGALLVLDERGAIKGILSERDIVKHFS 62
Query: 201 --SQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+++L + + +VMT + D L +M G+F HLPV++ D VV ++ +
Sbjct: 63 RKTEHLNTAAIKISEVMTKGVTYVKPHQSLEDCLQLMTAGRFRHLPVME-DDKVVGMISI 121
Query: 259 IHITHAAVAT-EILLDQI 275
+ AA+ + +DQ+
Sbjct: 122 GDVVKAALEERDFQIDQL 139
>gi|259506333|ref|ZP_05749235.1| CBS domain protein [Corynebacterium efficiens YS-314]
gi|259166113|gb|EEW50667.1| CBS domain protein [Corynebacterium efficiens YS-314]
Length = 618
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 10 LLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQ 69
LL ++ L GI TD+D+ RV+A L++ + PVS +MT NP S LA EA+ M +
Sbjct: 185 LLIQTDGELIGIATDRDMRGRVVAAALDITQ-PVSTIMTSNPRTATSQDLAFEAMLLMAE 243
Query: 70 GKFRHLPVVENGEVIALLDIAKCL 93
+ HLP+V+ G + ++ A +
Sbjct: 244 LRIHHLPIVDEGRISGIVTAADIM 267
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKV 214
+++ P ++ A + M +SS ++ + + GI T +D+ RV++ L + V +
Sbjct: 162 ISVGPGTSIREAAQTMERYAVSSLLIQTDGELIGIATDRDMRGRVVAAALDI-TQPVSTI 220
Query: 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVD--RDGDVVDVVDVIHI 261
MT NP AT +A+ +M + + HLP+VD R +V D++ +
Sbjct: 221 MTSNPRTATSQDLAFEAMLLMAELRIHHLPIVDEGRISGIVTAADIMRL 269
>gi|157961522|ref|YP_001501556.1| hypothetical protein Spea_1697 [Shewanella pealeana ATCC 700345]
gi|157846522|gb|ABV87021.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella pealeana ATCC 700345]
Length = 615
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RV ++L+ D+N L+ GILTD+D+ RV+A E + PV + MT P + S++L
Sbjct: 176 MRTSRVSSVLVIDNNKLV-GILTDRDLRNRVLA-ENHDGSLPVHQAMTTTPVSIESNSLV 233
Query: 61 VEALQKMVQGKFRHLPVVENG 81
EA+ M + HLPVV+NG
Sbjct: 234 FEAMLLMSEHNIHHLPVVDNG 254
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 5/126 (3%)
Query: 156 TISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL-VEKV 214
TI +V A++ M R+SS +V NK GILT +D+ RV+++N D +L V +
Sbjct: 162 TIDMKASVAQASRLMRTSRVSSVLVIDNNKLVGILTDRDLRNRVLAEN--HDGSLPVHQA 219
Query: 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILL-D 273
MT P ++ + +A+ +M + HLPVVD +G VV I + +LL
Sbjct: 220 MTTTPVSIESNSLVFEAMLLMSEHNIHHLPVVD-NGVTTGVVTSTDILRGQSSQPLLLIG 278
Query: 274 QIMRQQ 279
+I RQ+
Sbjct: 279 EIERQK 284
>gi|406911913|gb|EKD51615.1| signal transduction protein [uncultured bacterium]
Length = 148
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA R+V AL++ NA++ G+ +++D+A + + + PVS++M+R +V
Sbjct: 32 MAQRKVGALMVMKDNAVV-GVFSERDLARNMAHKGFSNPNIPVSEMMSRQVYYVNPTMTM 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
V+ ++ M + + RHLPV+EN +++ ++ I + I E
Sbjct: 91 VDCMKFMTEKRIRHLPVMENNKLVGVVSIGDVVNSIIQDQE 131
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 59/116 (50%), Gaps = 12/116 (10%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQ-----NLPA 206
+++ +++PTD+V A K M + ++ + +V +N G+ + +D+ + + N+P
Sbjct: 14 NQIWSVAPTDSVDKAVKLMAQRKVGALMVMKDNAVVGVFSERDLARNMAHKGFSNPNIPV 73
Query: 207 DSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG--DVVDVVDVIH 260
+ +V NP +VD + M + + HLPV++ + VV + DV++
Sbjct: 74 SEMMSRQVYYVNPTMT-----MVDCMKFMTEKRIRHLPVMENNKLVGVVSIGDVVN 124
>gi|254254274|ref|ZP_04947591.1| hypothetical protein BDAG_03569 [Burkholderia dolosa AUO158]
gi|124898919|gb|EAY70762.1| hypothetical protein BDAG_03569 [Burkholderia dolosa AUO158]
Length = 153
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+ D + + GI+T++D A +V+ +E + T V ++MT +V
Sbjct: 35 MAEKGIGALLVMDGDDI-AGIVTERDYARKVVLQERSSRATRVEEIMTAKVRYVEPSQST 93
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
E + M + + RHLPV++NG++I L+ I + IA
Sbjct: 94 DECMALMTEHRMRHLPVLDNGKLIGLISIGDLVKSVIA 131
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+ ++ TD V A K M E + + +V + GI+T +D +V+ Q + +T VE+
Sbjct: 19 IYSVRKTDLVYDAIKLMAEKGIGALLVMDGDDIAGIVTERDYARKVVLQERSSRATRVEE 78
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
+MT + + +M + + HLPV+D +G ++ ++ + + + +A +
Sbjct: 79 IMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-NGKLIGLISIGDLVKSVIADQ 133
>gi|325923778|ref|ZP_08185394.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas gardneri ATCC 19865]
gi|325545750|gb|EGD16988.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas gardneri ATCC 19865]
Length = 142
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVM-TRNPTFVLSDTL 59
MA + + A+L+ D L+ GI++++D A +V+ R+ T V+++M T T SDT+
Sbjct: 31 MAEKGIGAVLVMDGPRLI-GIVSERDYARKVVLRDRASSTTSVAEIMSTEVVTVSPSDTV 89
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMER 102
+Q M G+FRHLPVVENG V ++ I + I +R
Sbjct: 90 E-RCMQLMTDGRFRHLPVVENGRVHGVISIGDLVKAVIENQQR 131
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 178 AVVTVENKPR--GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIM 235
V V + PR GI++ +D +V+ ++ + +T V ++M+ + + + +M
Sbjct: 37 GAVLVMDGPRLIGIVSERDYARKVVLRDRASSTTSVAEIMSTEVVTVSPSDTVERCMQLM 96
Query: 236 HDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEIL-LDQIMR 277
DG+F HLPVV+ +G V V+ + + A + + +DQ+ R
Sbjct: 97 TDGRFRHLPVVE-NGRVHGVISIGDLVKAVIENQQRDIDQLQR 138
>gi|383757315|ref|YP_005436300.1| hypothetical protein RGE_14600 [Rubrivivax gelatinosus IL144]
gi|381377984|dbj|BAL94801.1| hypothetical protein RGE_14600 [Rubrivivax gelatinosus IL144]
Length = 142
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A + ALL+ D L+ G+++++D +V + N ET V+++MTR V SD
Sbjct: 31 LAEHEIGALLVMDGGRLV-GVVSERDYTRKVALQGRNSRETKVAEIMTREVVRVQSDAPM 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMER 102
E + M + + RHLPVV+ V+ ++ I L + IA ER
Sbjct: 90 HECMALMSEHRIRHLPVVDGATVLGMISIRDLLDELIAEQER 131
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 50/108 (46%)
Query: 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRV 199
+P + + + + P D+V A + + E + + +V + G+++ +D +V
Sbjct: 1 MKPVSEVLHRRQGTLWHLHPDDSVYAALELLAEHEIGALLVMDGGRLVGVVSERDYTRKV 60
Query: 200 ISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
Q + T V ++MT D P+ + + +M + + HLPVVD
Sbjct: 61 ALQGRNSRETKVAEIMTREVVRVQSDAPMHECMALMSEHRIRHLPVVD 108
>gi|327401358|ref|YP_004342197.1| signal transduction protein [Archaeoglobus veneficus SNP6]
gi|327316866|gb|AEA47482.1| putative signal transduction protein with CBS domains
[Archaeoglobus veneficus SNP6]
Length = 180
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
+V T +P +T+ A K+MLE + S VV ++KP GI+T KDIL +V+++N ++
Sbjct: 14 EVCTGNPDETLFSAAKRMLEFGVGSIVVVEDHKPLGIVTEKDILEKVVAKNRTPSEVKLK 73
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
++M+ T + +A IM LPV+D DGD++ +V
Sbjct: 74 EIMSYPLITIKPTTSVREAADIMLKRGIRRLPVID-DGDLIGIV 116
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 20 GILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV-EALQKMVQGKFRHLPVV 78
GI+T+KDI +V+A+ E + ++M+ P + T +V EA M++ R LPV+
Sbjct: 49 GIVTEKDILEKVVAKNRTPSEVKLKEIMS-YPLITIKPTTSVREAADIMLKRGIRRLPVI 107
Query: 79 ENGEVIALL 87
++G++I ++
Sbjct: 108 DDGDLIGIV 116
>gi|395006914|ref|ZP_10390707.1| CBS domain-containing protein [Acidovorax sp. CF316]
gi|394315102|gb|EJE51929.1| CBS domain-containing protein [Acidovorax sp. CF316]
Length = 145
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + AL++T+ +A++ GI T++D A ++ T VMT FV D +
Sbjct: 32 MADKGIGALVVTEGDAIV-GIFTERDYARKIALLGRTSAATLARDVMTTAVRFVRPDQSS 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEK 106
+ +Q M G+ RHLPVVE G+++ ++ I + D I+ + E+
Sbjct: 91 EQCMQIMSTGRLRHLPVVEGGKLVGMISIGDLVKDIISEQKFIIEQ 136
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 156 TISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVM 215
TI PTD+VL A + M + + + VVT + GI T +D ++ + +TL VM
Sbjct: 18 TIRPTDSVLSALQLMADKGIGALVVTEGDAIVGIFTERDYARKIALLGRTSAATLARDVM 77
Query: 216 TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
T D + IM G+ HLPVV+ G +V ++ +
Sbjct: 78 TTAVRFVRPDQSSEQCMQIMSTGRLRHLPVVE-GGKLVGMISI 119
>gi|385799169|ref|YP_005835573.1| KpsF/GutQ family protein [Halanaerobium praevalens DSM 2228]
gi|309388533|gb|ADO76413.1| KpsF/GutQ family protein [Halanaerobium praevalens DSM 2228]
Length = 332
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ++ + + D N L GI+TD DI R++ + + E PV K MT +P + D LA
Sbjct: 236 MTQSQMGSTSIVDQNGDLKGIITDGDI-RRLLEKSSDFIEEPVKKYMTIDPISIAPDKLA 294
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCL 93
EALQ M + LPVVEN + +A+L+ L
Sbjct: 295 AEALQIMEAKEINDLPVVENEKPVAMLNFQDLL 327
>gi|299135308|ref|ZP_07028499.1| putative signal transduction protein with CBS domains [Afipia sp.
1NLS2]
gi|298590285|gb|EFI50489.1| putative signal transduction protein with CBS domains [Afipia sp.
1NLS2]
Length = 142
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARE-LNLEETPVSKVMTRNPTFVLSDTL 59
+ R V A+L+ + + GIL+++D+ RV+ + ++ PVS+VMTR
Sbjct: 30 LTERHVGAVLVMKDHHIE-GILSERDV-VRVLGKHGASVLAMPVSEVMTRKVVTCRRADT 87
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
A ++KM GKFRHLPVVEN V+ L+ I + + ER E
Sbjct: 88 AASIMEKMTNGKFRHLPVVENERVVGLISIGDIVKWRVKEYEREQE 133
>gi|398862863|ref|ZP_10618448.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM78]
gi|398249805|gb|EJN35181.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM78]
Length = 146
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + V ALL+ D++ ++ GI++++D A +++ + TPV +M N V +
Sbjct: 34 MAEKNVGALLVVDNDEVV-GIISERDYARKLVLHGRSSVGTPVRDIMVSNVITVDTHQTV 92
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
L M + RHLPVVENG++I LL I + +AIA
Sbjct: 93 DTCLGIMSDKRLRHLPVVENGKLIGLLSIGDLVKEAIA 130
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 149 PEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADS 208
P+ +V I P VL A KM E + + +V ++ GI++ +D +++ +
Sbjct: 13 PKNQEVHQIKPDHMVLEALMKMAEKNVGALLVVDNDEVVGIISERDYARKLVLHGRSSVG 72
Query: 209 TLVEKVMTPNPECATIDT-PIVD-ALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
T V +M N T+DT VD L IM D + HLPVV+ +G ++ ++ + + A+
Sbjct: 73 TPVRDIMVSN--VITVDTHQTVDTCLGIMSDKRLRHLPVVE-NGKLIGLLSIGDLVKEAI 129
Query: 267 ATEILLDQIMRQQAQ 281
A + +++RQ Q
Sbjct: 130 AEQA---ELIRQLEQ 141
>gi|188996634|ref|YP_001930885.1| signal-transduction protein with CBS domains [Sulfurihydrogenibium
sp. YO3AOP1]
gi|188931701|gb|ACD66331.1| putative signal-transduction protein with CBS domains
[Sulfurihydrogenibium sp. YO3AOP1]
Length = 140
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL 210
+ + ++IS ++ M + S VV + KP GILT +DI++R++++ +
Sbjct: 8 RKEFISISQDASIKEVAGIMASRNVGSVVVVEDGKPVGILTDRDIVVRLVNKGINPSEVK 67
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITH 263
V ++MT +P C D I +AL I+ PVVD+DG + +V + I +
Sbjct: 68 VSELMTKDPICLQEDLGIFEALEIVKQEGVRRYPVVDKDGKMTGIVSLDDIVY 120
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA+R V ++++ + + GILTD+DI R++ + +N E VS++MT++P + D
Sbjct: 27 MASRNVGSVVVVEDGKPV-GILTDRDIVVRLVNKGINPSEVKVSELMTKDPICLQEDLGI 85
Query: 61 VEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLY 94
EAL+ + Q R PVV+ +G++ ++ + +Y
Sbjct: 86 FEALEIVKQEGVRRYPVVDKDGKMTGIVSLDDIVY 120
>gi|386742225|ref|YP_006215404.1| cyclic nucleotide binding protein/2 CBS domains [Providencia
stuartii MRSN 2154]
gi|384478918|gb|AFH92713.1| cyclic nucleotide binding protein/2 CBS domains [Providencia
stuartii MRSN 2154]
Length = 623
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + + L+ D LL GI+TD+D+ RV+A L+++ TPVSKVMT NP + ++
Sbjct: 181 MVRKHRSSALVMDGETLL-GIITDRDLTKRVVALGLDIK-TPVSKVMTENPITIAANAPI 238
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
+ A++ M+Q R LPV+ N + +L
Sbjct: 239 INAIELMMQHNIRSLPVMTNHRITGVL 265
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 150 EKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADST 209
E +V I+P +V A ++M+ SSA+V GI+T +D+ RV++ L T
Sbjct: 161 ENGNIVVITPGTSVQDAAQEMVRKHRSSALVMDGETLLGIITDRDLTKRVVALGLDI-KT 219
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVV 246
V KVMT NP + PI++A+ +M LPV+
Sbjct: 220 PVSKVMTENPITIAANAPIINAIELMMQHNIRSLPVM 256
>gi|340029912|ref|ZP_08665975.1| signal-transduction protein [Paracoccus sp. TRP]
Length = 145
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 67/117 (57%), Gaps = 4/117 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
++ +R+ A+++++ + GIL+++DI + R + P+S++MTR + A
Sbjct: 31 LSEKRIGAVVVSEDGRIPLGILSERDIVRELGRRGAAVLTLPISELMTRKLITCTTGEDA 90
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116
+ L +M QG+FRHLPVV + GE++ L+ I + AR++ A + +A+ + G
Sbjct: 91 LVILDRMTQGRFRHLPVVNDEGEMVGLVSIGDTVS---ARLKELAAEKEALTGMIMG 144
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 62/111 (55%), Gaps = 11/111 (9%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENK-PRGILTSKDILMRVISQN-----LPAD 207
++T++P +V A + + E R+ + VV+ + + P GIL+ +DI+ + + LP
Sbjct: 15 IITVAPDASVADAARLLSEKRIGAVVVSEDGRIPLGILSERDIVRELGRRGAAVLTLPIS 74
Query: 208 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+ K++T C T + +V L M G+F HLPVV+ +G++V +V +
Sbjct: 75 ELMTRKLIT----CTTGEDALV-ILDRMTQGRFRHLPVVNDEGEMVGLVSI 120
>gi|402820645|ref|ZP_10870212.1| hypothetical protein IMCC14465_14460 [alpha proteobacterium
IMCC14465]
gi|402511388|gb|EJW21650.1| hypothetical protein IMCC14465_14460 [alpha proteobacterium
IMCC14465]
Length = 143
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%)
Query: 4 RRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEA 63
R V L+ T + L G+++++D+ + + + P+S M+ NP + +T VEA
Sbjct: 33 RSVGILVATSPDEPLAGVISERDVVRALSNHGASALDRPISDFMSSNPVTINLETTVVEA 92
Query: 64 LQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKA 109
++ M + + RHLPV++NG++ L+ I + I E AE K+
Sbjct: 93 MEIMTEKRIRHLPVIDNGKICGLVSIGDVVKRRIMDTEAEAEALKS 138
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 174 RLSSAVVTVENKPRGIL-------------TSKDILMRVISQNLPADSTLVEKVMTPNPE 220
+LS A+ +EN+ GIL + +D++ + + A + M+ NP
Sbjct: 22 KLSDAIAVLENRSVGILVATSPDEPLAGVISERDVVRALSNHGASALDRPISDFMSSNPV 81
Query: 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
++T +V+A+ IM + + HLPV+D +G + +V +
Sbjct: 82 TINLETTVVEAMEIMTEKRIRHLPVID-NGKICGLVSI 118
>gi|126726337|ref|ZP_01742178.1| Protein containing a CBS domain [Rhodobacterales bacterium
HTCC2150]
gi|126704200|gb|EBA03292.1| Protein containing a CBS domain [Rhodobacteraceae bacterium
HTCC2150]
Length = 144
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
++ R+V AL+++D L GIL+++DI + R V +MT + A
Sbjct: 31 LSNRKVGALIVSDDGKTLDGILSERDIIREMGKRGTACLGDNVGDLMTGTVSCCAKSDTA 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL---DIAKCLYDAIARMERA 103
+ L+ M +G+FRH+P+++ G++I L+ D+ K D +AR A
Sbjct: 91 DKVLETMTEGRFRHMPILDGGKIIGLISIGDVVKARLDDMARENSA 136
>gi|183599960|ref|ZP_02961453.1| hypothetical protein PROSTU_03481 [Providencia stuartii ATCC 25827]
gi|188022235|gb|EDU60275.1| CBS domain protein [Providencia stuartii ATCC 25827]
Length = 623
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + + L+ D LL GI+TD+D+ RV+A L+++ TPVSKVMT NP + ++
Sbjct: 181 MVRKHRSSALVMDGETLL-GIITDRDLTKRVVALGLDIK-TPVSKVMTENPITIAANAPI 238
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
+ A++ M+Q R LPV+ N + +L
Sbjct: 239 INAIELMMQHNIRSLPVMTNHRITGVL 265
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 150 EKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADST 209
E +V I+P +V A ++M+ SSA+V GI+T +D+ RV++ L T
Sbjct: 161 ENGNIVVITPGTSVQDAAQEMVRKHRSSALVMDGETLLGIITDRDLTKRVVALGLDI-KT 219
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVV 246
V KVMT NP + PI++A+ +M LPV+
Sbjct: 220 PVSKVMTENPITIAANAPIINAIELMMQHNIRSLPVM 256
>gi|209884748|ref|YP_002288605.1| hypothetical protein OCAR_5609 [Oligotropha carboxidovorans OM5]
gi|337741598|ref|YP_004633326.1| CBS domain-containing protein [Oligotropha carboxidovorans OM5]
gi|386030614|ref|YP_005951389.1| hypothetical protein OCA4_c23880 [Oligotropha carboxidovorans OM4]
gi|209872944|gb|ACI92740.1| protein with 2 CBS domains [Oligotropha carboxidovorans OM5]
gi|336095682|gb|AEI03508.1| CBS domain protein [Oligotropha carboxidovorans OM4]
gi|336099262|gb|AEI07085.1| CBS domain protein [Oligotropha carboxidovorans OM5]
Length = 142
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+++R + A+L+ + + GIL+++D+ + R + PV VMTR A
Sbjct: 30 LSSRHIGAVLVMKDHHIE-GILSERDVVRVLAKRGAEALQEPVGDVMTRKVVTCRRADTA 88
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
++KM GKFRHLPVVEN V+ L+ I + + E E
Sbjct: 89 ASIMEKMTNGKFRHLPVVENDRVVGLISIGDIVKWRVKEFEHEQE 133
>gi|126178295|ref|YP_001046260.1| signal-transduction protein [Methanoculleus marisnigri JR1]
gi|125861089|gb|ABN56278.1| putative signal-transduction protein with CBS domains
[Methanoculleus marisnigri JR1]
Length = 150
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 65/111 (58%), Gaps = 6/111 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + V ++++ + GILTD+D+A RV+A+E N E S+++TR+ D++
Sbjct: 27 MGEKNVGSVVVVTGDNRPTGILTDRDLAVRVMAQEKNPGEVRASEILTRD-VITFQDSMG 85
Query: 61 V-EALQKMVQGKFRHLPVVEN-GEVIALL---DIAKCLYDAIARMERAAEK 106
+ EA+QKM R +P+V++ G +I ++ DI + L + +A + + EK
Sbjct: 86 IYEAIQKMTNEGIRRMPIVDDAGRLIGIVTMDDIVRMLGEEMAAIAKNIEK 136
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 7/127 (5%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVV-TVENKPRGILTSKDILMRVISQNLPADST 209
+ +VV +SP + K M E + S VV T +N+P GILT +D+ +RV++Q
Sbjct: 8 REQVVAVSPDTPAVEVAKIMGEKNVGSVVVVTGDNRPTGILTDRDLAVRVMAQEKNPGEV 67
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVV------DVVDVIHITH 263
+++T + I +A+ M + +P+VD G ++ D+V ++
Sbjct: 68 RASEILTRDVITFQDSMGIYEAIQKMTNEGIRRMPIVDDAGRLIGIVTMDDIVRMLGEEM 127
Query: 264 AAVATEI 270
AA+A I
Sbjct: 128 AAIAKNI 134
>gi|424045259|ref|ZP_17782824.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HENC-03]
gi|408886309|gb|EKM24983.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HENC-03]
Length = 620
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 15 NALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRH 74
N + G++TD+D+ RVIA+ ++++ P+S+VMT +P + D L + A M+Q R+
Sbjct: 195 NDKIVGLITDRDMTKRVIAQGVSIDR-PISEVMTHDPQTIKPDDLVLHAASMMMQHNIRN 253
Query: 75 LPVVENGEVIALL 87
LP+VEN +V+ +L
Sbjct: 254 LPLVENNKVVGVL 266
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
+V ++ ++ +ML AVV +K G++T +D+ RVI+Q + D +
Sbjct: 164 GRVAVVTADQSIQTVANEMLTKCSPCAVVYENDKIVGLITDRDMTKRVIAQGVSIDRPIS 223
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEIL 271
E VMT +P+ D ++ A +M +LP+V+ + VV V+ H+ I
Sbjct: 224 E-VMTHDPQTIKPDDLVLHAASMMMQHNIRNLPLVE-NNKVVGVLTTTHLVQNHRVQAIF 281
Query: 272 L 272
L
Sbjct: 282 L 282
>gi|159044294|ref|YP_001533088.1| hypothetical protein Dshi_1745 [Dinoroseobacter shibae DFL 12]
gi|157912054|gb|ABV93487.1| hypothetical protein Dshi_1745 [Dinoroseobacter shibae DFL 12]
Length = 144
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 66/117 (56%), Gaps = 5/117 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
++ R++ +++++ + GIL+++DI V R V +MTR+ D A
Sbjct: 31 LSLRKIGSVVVSSNGKTADGILSERDIVREVGVRGAGCLTETVGNMMTRDLVTCGPDESA 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAI-ARMERAAEKGKAIAAAVEG 116
+ L +M +G+FRH+PVV++GE+I L+ L DA+ AR++ + + +A+ + G
Sbjct: 91 DKVLMQMTEGRFRHMPVVQDGEMIGLI----TLGDAVKARLQEVSMEKEALEGMIMG 143
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENK-PRGILTSKDILMRVISQNLPADSTL 210
++VVTI P +V A K + ++ S VV+ K GIL+ +DI+ V + +
Sbjct: 13 AEVVTIGPDASVADAAKVLSLRKIGSVVVSSNGKTADGILSERDIVREVGVRGAGCLTET 72
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
V +MT + D L M +G+F H+PVV +DG+++ ++
Sbjct: 73 VGNMMTRDLVTCGPDESADKVLMQMTEGRFRHMPVV-QDGEMIGLI 117
>gi|254509884|ref|ZP_05121951.1| CBS domain protein [Rhodobacteraceae bacterium KLH11]
gi|221533595|gb|EEE36583.1| CBS domain protein [Rhodobacteraceae bacterium KLH11]
Length = 145
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 64/112 (57%), Gaps = 7/112 (6%)
Query: 1 MAARRVDALLLT-DSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRN-PTFVLSDT 58
+A RR+ ++++ D GIL+++DI + A PVS MTR+ T D+
Sbjct: 31 LATRRIGTVIISEDGGQTALGILSERDIVRELAASGSGCLGKPVSAYMTRDLVTATQQDS 90
Query: 59 LAVEA-LQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIAR--MERAAEKG 107
VEA L +M +G+FRH+PVVE+G++I ++ + + +A ME+ A +G
Sbjct: 91 --VEAILSRMTEGRFRHMPVVEDGKLIGIVTLGDAVKAQLAELAMEKNALEG 140
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPR--GILTSKDILMRVISQNLPADSTLV 211
VVT+ P+ TV A + + R+ + +++ + GIL+ +DI+ + + V
Sbjct: 15 VVTVEPSATVSQAAEILATRRIGTVIISEDGGQTALGILSERDIVRELAASGSGCLGKPV 74
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
MT + AT + L M +G+F H+PVV+ DG ++ +V
Sbjct: 75 SAYMTRDLVTATQQDSVEAILSRMTEGRFRHMPVVE-DGKLIGIV 118
>gi|83815791|ref|YP_446387.1| hypothetical protein SRU_2283 [Salinibacter ruber DSM 13855]
gi|294508324|ref|YP_003572382.1| hypothetical protein SRM_02509 [Salinibacter ruber M8]
gi|83757185|gb|ABC45298.1| CBS domain pair, putative [Salinibacter ruber DSM 13855]
gi|294344652|emb|CBH25430.1| putative CBS domain protein [Salinibacter ruber M8]
Length = 160
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%)
Query: 148 IPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPAD 207
+ + V+T SPT TV +M++ + S VV + G+ T ++ + + + +D
Sbjct: 22 LADDGNVLTTSPTATVFECIGRMVDRDVGSIVVMEGDAIAGLFTERNYMQSIALEGRSSD 81
Query: 208 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
T V++VMT + D P+ + L +M + HLPVVD GD++ +V +
Sbjct: 82 ETEVQEVMTEDVATVRPDKPLEECLRLMTRLRCRHLPVVDEGGDLIGIVSI 132
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M R V ++++ + +A+ G+ T+++ + + +ET V +VMT + V D
Sbjct: 44 MVDRDVGSIVVMEGDAI-AGLFTERNYMQSIALEGRSSDETEVQEVMTEDVATVRPDKPL 102
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEK 106
E L+ M + + RHLPVV E G++I ++ I + I +R +
Sbjct: 103 EECLRLMTRLRCRHLPVVDEGGDLIGIVSIGDGVKQIIQTAQRETSR 149
>gi|284036381|ref|YP_003386311.1| signal transduction protein with CBS domains [Spirosoma linguale
DSM 74]
gi|283815674|gb|ADB37512.1| putative signal transduction protein with CBS domains [Spirosoma
linguale DSM 74]
Length = 145
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+ D N L GI +++D A +VI ++ + ++T ++ VMT N + D
Sbjct: 31 MAEKNIGALLVVD-NGELTGIFSERDYARKVILKDRHSDDTRIADVMTANVITIGPDQSL 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDI 89
E + M RHLPVV+ GE+I ++ I
Sbjct: 90 EEGMVIMSDRHIRHLPVVDKGELIGIISI 118
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 6/122 (4%)
Query: 156 TISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVM 215
++S TVL K M E + + +V + GI + +D +VI ++ +D T + VM
Sbjct: 17 SVSSDQTVLDGLKVMAEKNIGALLVVDNGELTGIFSERDYARKVILKDRHSDDTRIADVM 76
Query: 216 TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILLDQI 275
T N D + + + IM D HLPVVD+ G+++ ++ + + T I+ DQ
Sbjct: 77 TANVITIGPDQSLEEGMVIMSDRHIRHLPVVDK-GELIGIISI-----NDIVTAIIRDQK 130
Query: 276 MR 277
R
Sbjct: 131 TR 132
>gi|337269160|ref|YP_004613215.1| putative signal transduction protein with CBS domains
[Mesorhizobium opportunistum WSM2075]
gi|336029470|gb|AEH89121.1| putative signal transduction protein with CBS domains
[Mesorhizobium opportunistum WSM2075]
Length = 143
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLE-ETPVSKVMTRNPTFVLSDTL 59
+A ++ AL++T+ + + GIL+++DI RV+ARE + PV MT +
Sbjct: 30 LAEHKIGALVITNGDHKIVGILSERDI-VRVVAREGGAALDIPVRSAMTPKVKICNENHT 88
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAA 112
E ++ M +G+FRHLPV ++G + ++ I + I +ER AE+ +A A
Sbjct: 89 VNEVMEIMTRGRFRHLPVEKDGLLDGIVSIGDVVKRRIEDVEREAEEIRAYIA 141
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILMRVISQNLPADSTLVE 212
V+T+ P + + A + + E ++ + V+T ++K GIL+ +DI+ V + A V
Sbjct: 14 VLTLGPNEKLSEAIRILAEHKIGALVITNGDHKIVGILSERDIVRVVAREGGAALDIPVR 73
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG---DVVDVVDVI 259
MTP + + + + + IM G+F HLP V++DG +V + DV+
Sbjct: 74 SAMTPKVKICNENHTVNEVMEIMTRGRFRHLP-VEKDGLLDGIVSIGDVV 122
>gi|311107598|ref|YP_003980451.1| hypothetical protein AXYL_04417 [Achromobacter xylosoxidans A8]
gi|310762287|gb|ADP17736.1| CBS domain pair family protein 3 [Achromobacter xylosoxidans A8]
Length = 146
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA R + A+++ +A+L G+LT++D A +++ ++ + T V +MT + +V
Sbjct: 32 MAERSIGAVVVVQGDAVL-GMLTERDYARKIVLQDRSSRTTKVRDIMTDSVYYVGRADTR 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
+ M + FRHLPV+E+G++I LL I + D ++
Sbjct: 91 EHCMAMMTERHFRHLPVIEDGKLIGLLSIGDLVKDVMS 128
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Query: 142 PSLSTIIPEKSK--VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRV 199
+++ I+ EK+ VVT+SP +V A K M E + + VV + G+LT +D ++
Sbjct: 2 KTVAEILREKANHSVVTVSPDASVFEAVKIMAERSIGAVVVVQGDAVLGMLTERDYARKI 61
Query: 200 ISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+ Q+ + +T V +MT + + +M + F HLPV++ DG ++ ++ +
Sbjct: 62 VLQDRSSRTTKVRDIMTDSVYYVGRADTREHCMAMMTERHFRHLPVIE-DGKLIGLLSI 119
>gi|220931478|ref|YP_002508386.1| putative signal-transduction protein with CBS domains
[Halothermothrix orenii H 168]
gi|219992788|gb|ACL69391.1| putative signal-transduction protein with CBS domains
[Halothermothrix orenii H 168]
Length = 141
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + V ++ +TD N + GI+TD+DI R +A+ N+ PV +VMT + + D
Sbjct: 27 MRSLNVGSVPVTDGNRPV-GIITDRDITIRSVAQAGNIN-MPVHQVMTGDIVYGTPDMSV 84
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAA 112
EA Q M + R LPVVENG ++ ++ L D R E GKA+ +
Sbjct: 85 EEAAQIMASKQIRRLPVVENGRLVGIV----SLGDLAVRERSDIEAGKALTS 132
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 10/109 (9%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQ----NLPAD 207
S V +I+P +V A + M L + S VT N+P GI+T +DI +R ++Q N+P
Sbjct: 9 SDVTSINPNSSVKDAAQVMRSLNVGSVPVTDGNRPVGIITDRDITIRSVAQAGNINMP-- 66
Query: 208 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
V +VMT + T D + +A IM + LPVV+ +G +V +V
Sbjct: 67 ---VHQVMTGDIVYGTPDMSVEEAAQIMASKQIRRLPVVE-NGRLVGIV 111
>gi|149927334|ref|ZP_01915590.1| cyclic nucleotide-binding protein [Limnobacter sp. MED105]
gi|149824048|gb|EDM83271.1| cyclic nucleotide-binding protein [Limnobacter sp. MED105]
Length = 619
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 72/141 (51%), Gaps = 15/141 (10%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA A+++ D + L GI+TD+D RV+A+ L TP+ +MT +P V + L
Sbjct: 176 MAQSNQTAVIVQDESQSLIGIVTDQDFRDRVVAKGLPYS-TPIRHIMTESPGTVNHNQLV 234
Query: 61 VEALQKMVQGKFRHLPVVENGEVIAL--------------LDIAKCLYDAIARMERAAEK 106
EA+ M++ +H+PV++N EV+ + L + ++++ + +E AA K
Sbjct: 235 FEAMMLMLRNNTQHVPVLKNSEVVGMVSQSDLVKYQSRNSLFLVNSIFNSTSVVELAALK 294
Query: 107 GKAIAAAVEGVEKHWGTSISG 127
AA V V++ + + G
Sbjct: 295 KDVQAAFVRMVQEDANSRMVG 315
>gi|430003682|emb|CCF19471.1| conserved hypothetical protein with 2 CBS domains [Rhizobium sp.]
Length = 144
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%)
Query: 4 RRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEA 63
R++ AL++T + + GI T++D+ + + + + PVS VMT N +T
Sbjct: 35 RKIGALVVTGVDGRIAGIFTERDMVRALAEKGAAILDQPVSSVMTVNVQTCREETTVNAL 94
Query: 64 LQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113
++ M G+FRH+PV + G + ++ I + I +E AE+ KA A
Sbjct: 95 MEMMSSGRFRHVPVEDGGRLAGIISIGDVVKSRIREVEMEAEEIKAYIAG 144
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILMRVISQNLPADSTLVE 212
VVT+SP ++L + + E ++ + VVT V+ + GI T +D++ + + V
Sbjct: 16 VVTVSPDKSLLQVAEILHERKIGALVVTGVDGRIAGIFTERDMVRALAEKGAAILDQPVS 75
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD--RDGDVVDVVDVI 259
VMT N + +T + + +M G+F H+PV D R ++ + DV+
Sbjct: 76 SVMTVNVQTCREETTVNALMEMMSSGRFRHVPVEDGGRLAGIISIGDVV 124
>gi|385333692|ref|YP_005887643.1| signal-transduction protein [Marinobacter adhaerens HP15]
gi|311696842|gb|ADP99715.1| signal-transduction protein [Marinobacter adhaerens HP15]
Length = 624
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 1 MAARRVDALLLTDSNA---LLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSD 57
M V ALLL D LL GI+TD+D+ TR ++ L ETP+S++M+ + + S+
Sbjct: 176 MTENGVSALLLMDEEGEKPLLKGIITDRDLRTRALSEAL-ASETPISEIMSEDLITIRSN 234
Query: 58 TLAVEALQKMVQGKFRHLPVVENGE---VIALLDIAK 91
EA+ M+ HLPV++ E VIAL DI K
Sbjct: 235 MFIFEAMLTMLHNNVHHLPVMDRDEVRGVIALSDIVK 271
>gi|386360663|ref|YP_006058908.1| signal transduction protein [Thermus thermophilus JL-18]
gi|383509690|gb|AFH39122.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Thermus thermophilus JL-18]
Length = 585
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 137 ERMFRPSLSTIIPE--KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKD 194
ER+ P L+ + E + V + PT +V A ++M E +SS + V +P GILT +D
Sbjct: 129 ERVLEPGLARPVGELVQRPPVFVDPTASVEEAARRMREEGISS--LLVRGEPLGILTDRD 186
Query: 195 ILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVD 254
+ RV+++ LP ST V +V T DTP+++A+ M + + HLP+ + V
Sbjct: 187 LRNRVLAEGLP-PSTPVGQVATRPTFTLPADTPLLEAVAAMLERRIHHLPLTRGEAVVGV 245
Query: 255 VVDVIHITHAAVATEILLDQIMR 277
V + H A + LL ++ R
Sbjct: 246 VTHTDLLAHQAQSPLALLRRVER 268
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 19 CGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVL-SDTLAVEALQKMVQGKFRHLPV 77
GILTD+D+ RV+A L TPV +V TR PTF L +DT +EA+ M++ + HLP+
Sbjct: 179 LGILTDRDLRNRVLAEGLP-PSTPVGQVATR-PTFTLPADTPLLEAVAAMLERRIHHLPL 236
Query: 78 VENGEVIA 85
V+
Sbjct: 237 TRGEAVVG 244
>gi|145591545|ref|YP_001153547.1| signal-transduction protein [Pyrobaculum arsenaticum DSM 13514]
gi|379003844|ref|YP_005259516.1| putative signal transduction protein [Pyrobaculum oguniense TE7]
gi|145283313|gb|ABP50895.1| putative signal-transduction protein with CBS domains [Pyrobaculum
arsenaticum DSM 13514]
gi|375159297|gb|AFA38909.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pyrobaculum oguniense TE7]
Length = 139
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +V + ++ D GI+T++D+ VIAR L+ +TP VMT NP + D L
Sbjct: 37 MYENKVGSAVIVDDEGKAIGIITERDLVY-VIARGLS-PDTPAWMVMTENPIVIDQDALV 94
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALL 87
VEA++KM + RHLPVV+ G+V+ ++
Sbjct: 95 VEAMEKMRELNIRHLPVVDKAGKVVGVV 122
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAV-VTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
VVT D + KM E ++ SAV V E K GI+T +D L+ VI++ L D T
Sbjct: 21 VVTAKRDDKIKDIAAKMYENKVGSAVIVDDEGKAIGIITERD-LVYVIARGLSPD-TPAW 78
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILL 272
VMT NP D +V+A+ M + HLPVVD+ G VV VV I A LL
Sbjct: 79 MVMTENPIVIDQDALVVEAMEKMRELNIRHLPVVDKAGKVVGVVSFRDIVDFAATMFSLL 138
>gi|408380801|ref|ZP_11178351.1| CBS domain-containing membrane protein [Methanobacterium formicicum
DSM 3637]
gi|407816066|gb|EKF86628.1| CBS domain-containing membrane protein [Methanobacterium formicicum
DSM 3637]
Length = 271
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 110/250 (44%), Gaps = 52/250 (20%)
Query: 13 DSNALLCGILTDKDIATRVIAREL-NLEETP--VSKVMTRNPTFVLSDTLAVEALQKMVQ 69
D L GI+T+KDI+ R+ + + NL + VS VMT P + +A Q M++
Sbjct: 43 DHQKELVGIITEKDISIRLGSSKYGNLAPSHFHVSTVMTAQPLIADGNQTLGDAAQLMLE 102
Query: 70 GKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPN 129
L V + E+I ++ L+ R P
Sbjct: 103 NGIGGLTVTDGMEIIGMITKTDFLHTCQGR----------------------------PF 134
Query: 130 TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGI 189
T I T++ERM +S V TI P D ++ A + +++ + V + + +G+
Sbjct: 135 TDI-TVKERM-----------QSDVTTIGPQDRLVHARRIIIDEGIGRLPVMEDGQLQGM 182
Query: 190 LTSKDILMRVIS-------QNLPAD--STLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
+T+KDI M ++S + PA + LVE VM N + T +T + +A I+ D F
Sbjct: 183 ITAKDIAMAMMSFRKVVPDKYKPARIRNLLVEDVMIQNVKTITEETTMAEAAQILLDENF 242
Query: 241 LHLPVVDRDG 250
LPV++ +G
Sbjct: 243 SGLPVMNEEG 252
>gi|254784369|ref|YP_003071797.1| CBS domain-containing protein [Teredinibacter turnerae T7901]
gi|237683605|gb|ACR10869.1| CBS domain protein [Teredinibacter turnerae T7901]
Length = 628
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 158 SPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP 217
SP T+ A + M ++SS ++T + + GI+T +D+ RV+++ + AD+ V VMTP
Sbjct: 176 SPNITIRRAAQIMTNNKISSLLITEDERLVGIMTDRDLRTRVVAKGV-ADTEPVSGVMTP 234
Query: 218 NPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
P C + + A +M HLPVVDRD
Sbjct: 235 KPHCIDMRGRLHQAQLVMMSSGIHHLPVVDRD 266
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ++ +LL+T+ L+ GI+TD+D+ TRV+A+ + E PVS VMT P +
Sbjct: 188 MTNNKISSLLITEDERLV-GIMTDRDLRTRVVAKGVADTE-PVSGVMTPKPHCIDMRGRL 245
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIA 90
+A M+ HLPVV+ + +L ++
Sbjct: 246 HQAQLVMMSSGIHHLPVVDRDVPVGMLGMS 275
>gi|365097177|ref|ZP_09331422.1| signal-transduction protein [Acidovorax sp. NO-1]
gi|363413471|gb|EHL20667.1| signal-transduction protein [Acidovorax sp. NO-1]
Length = 145
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + AL++T+ A++ GI T++D A ++ T V VMT FV D +
Sbjct: 32 MADKSIGALIVTEGEAIV-GIFTERDYARKIALMGRTSAVTQVKDVMTSAVMFVRPDQTS 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEK 106
+ +Q M + RHLPV+ NG+++ ++ I + D I+ + E+
Sbjct: 91 EQCMQIMSNNRLRHLPVLSNGKLVGMISIGDLVKDIISEQKFIIEQ 136
>gi|381190511|ref|ZP_09898033.1| cyclic nucleotide binding protein/CBS domain-containing protein
[Thermus sp. RL]
gi|380451766|gb|EIA39368.1| cyclic nucleotide binding protein/CBS domain-containing protein
[Thermus sp. RL]
Length = 585
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 137 ERMFRPSLSTIIPE--KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKD 194
ER+ P L+ + E + V + PT +V A ++M E +SS + V +P GILT +D
Sbjct: 129 ERVLEPGLARPVGELVQRPPVFVDPTASVEEAARRMREEGISS--LLVRGEPLGILTDRD 186
Query: 195 ILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVD 254
+ RV+++ LP ST V +V T DTP+++A+ M + + HLP+ + V
Sbjct: 187 LRNRVLAEGLP-PSTPVGQVATRPTFTLPADTPLLEAVAAMLERRIHHLPLTRGEAVVGV 245
Query: 255 VVDVIHITHAAVATEILLDQIMR 277
V + H A + LL ++ R
Sbjct: 246 VTHTDLLAHQAQSPLALLRRVER 268
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 19 CGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVL-SDTLAVEALQKMVQGKFRHLPV 77
GILTD+D+ RV+A L TPV +V TR PTF L +DT +EA+ M++ + HLP+
Sbjct: 179 LGILTDRDLRNRVLAEGLP-PSTPVGQVATR-PTFTLPADTPLLEAVAAMLERRIHHLPL 236
Query: 78 VENGEVIA 85
V+
Sbjct: 237 TRGEAVVG 244
>gi|358451698|ref|ZP_09162131.1| cyclic nucleotide-binding protein [Marinobacter manganoxydans
MnI7-9]
gi|357224167|gb|EHJ02699.1| cyclic nucleotide-binding protein [Marinobacter manganoxydans
MnI7-9]
Length = 624
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 1 MAARRVDALLLTDSNA---LLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSD 57
M V ALLL D LL GI+TD+D+ TR ++ L ETP+S++M+ + + S+
Sbjct: 176 MTENGVSALLLMDEEGEKPLLKGIITDRDLRTRALSEAL-ASETPISEIMSEDLITIRSN 234
Query: 58 TLAVEALQKMVQGKFRHLPVVENGE---VIALLDIAK 91
EA+ M+ HLPV++ E VIAL DI K
Sbjct: 235 MFIFEAMLTMLHNNVHHLPVMDRDEVRGVIALSDIVK 271
>gi|386391895|ref|ZP_10076676.1| PAS domain S-box [Desulfovibrio sp. U5L]
gi|385732773|gb|EIG52971.1| PAS domain S-box [Desulfovibrio sp. U5L]
Length = 829
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 39/253 (15%)
Query: 4 RRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEA 63
RR + L+ L GI+T+++I R + + PV+++M+ V DT+ VEA
Sbjct: 32 RRSISCLIVAEAGLPVGIITERNILWAAAHRGEDFADRPVAELMSAPVVTVAEDTMLVEA 91
Query: 64 LQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGT 123
+ + + RHL +V+ AA + + + + +E+
Sbjct: 92 YHLLAKKRLRHLVMVD-----------------------AAGQARGVLTQSDLIERL--- 125
Query: 124 SISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVE 183
G ++ E R +S I+ +VVT TV A ++M + +S +V +
Sbjct: 126 ---GHDSLSEIKR-------VSVIM--TREVVTAPGNSTVREAVRRMADRSISCLIVARD 173
Query: 184 NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHL 243
+P GI+T +D++ R++S++ + +M+ C D P+ +A +M + L
Sbjct: 174 GRPAGIITERDVV-RLLSESPHLGRLKLYDIMSCPVVCVEADRPVFEAAMLMKKRRMRRL 232
Query: 244 PVVDRDGDVVDVV 256
VVD D V+ VV
Sbjct: 233 VVVDDDRRVLGVV 245
>gi|284173895|ref|ZP_06387864.1| hypothetical protein Ssol98_04450 [Sulfolobus solfataricus 98/2]
Length = 129
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL 210
K++V+T+ + T+ M + + S +V KP GI+T +D++ R I + D T+
Sbjct: 11 KTRVITVGRNTMLKEVTRIMTDNNVGSVIVVDNGKPIGIITERDVV-RAIGKGKSLD-TI 68
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
E++MT + D+PI AL +M HLPV+D DG++ ++ + I A
Sbjct: 69 AEEIMTASLITIKEDSPITGALSLMRTYNIRHLPVIDYDGNLRGIISIRDIARA 122
>gi|255263911|ref|ZP_05343253.1| CBS domain containing protein [Thalassiobium sp. R2A62]
gi|255106246|gb|EET48920.1| CBS domain containing protein [Thalassiobium sp. R2A62]
Length = 144
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 57/101 (56%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
++ +R+ ++++ S + GIL+++DI + R + + +MT NP +A
Sbjct: 31 LSKKRIGTVVVSASGSRADGILSERDIVRELGTRGVACMTDSAADIMTVNPVTCAPTDVA 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
L KM QG+FRH+PVV++GE++ L+ + + ++ +E
Sbjct: 91 DVVLAKMTQGRFRHMPVVKDGEMVGLITLGDVVKARLSELE 131
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVE-NKPRGILTSKDILMRVISQNLPADSTLVE 212
V+T+ P +V + + R+ + VV+ ++ GIL+ +DI+ + ++ + +
Sbjct: 15 VITVLPGMSVGEVAAVLSKKRIGTVVVSASGSRADGILSERDIVRELGTRGVACMTDSAA 74
Query: 213 KVMTPNP-ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
+MT NP CA D V L M G+F H+PVV +DG++V ++
Sbjct: 75 DIMTVNPVTCAPTDVADV-VLAKMTQGRFRHMPVV-KDGEMVGLI 117
>gi|429217476|ref|YP_007175466.1| signal transduction protein [Caldisphaera lagunensis DSM 15908]
gi|429134005|gb|AFZ71017.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Caldisphaera lagunensis DSM 15908]
Length = 133
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLV 211
K +T P T+ K M E R+ S V+T ++K GI T +D L RV+++ +P D V
Sbjct: 15 KAITTFPNVTIAEIAKIMYENRIGSVVITSPDDKVLGIFTERD-LTRVVAEGVPLDKH-V 72
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHIT 262
VMT NP T + A+ +M++ HLPVVD +G + ++ V +T
Sbjct: 73 GDVMTKNPVLITQSEGLSKAISLMYEKNVRHLPVVDNEGKIKGIISVRDLT 123
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M R+ ++++T + + GI T++D+ TRV+A + L++ V VMT+NP +
Sbjct: 32 MYENRIGSVVITSPDDKVLGIFTERDL-TRVVAEGVPLDKH-VGDVMTKNPVLITQSEGL 89
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALLDI 89
+A+ M + RHLPVV+N G++ ++ +
Sbjct: 90 SKAISLMYEKNVRHLPVVDNEGKIKGIISV 119
>gi|15899929|ref|NP_344534.1| hypothetical protein SSO3230 [Sulfolobus solfataricus P2]
gi|13816671|gb|AAK43324.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
Length = 156
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL 210
K++V+T+ + T+ M + + S +V KP GI+T +D++ R I + D T+
Sbjct: 38 KTRVITVGRNTMLKEVTRIMTDNNVGSVIVVDNGKPIGIITERDVV-RAIGKGKSLD-TI 95
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
E++MT + D+PI AL +M HLPV+D DG++ ++ + I A
Sbjct: 96 AEEIMTASLITIKEDSPITGALSLMRTYNIRHLPVIDYDGNLRGIISIRDIARA 149
>gi|168007993|ref|XP_001756692.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692288|gb|EDQ78646.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 208
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 13/147 (8%)
Query: 126 SGPNTFIETLRERMFRPS-LSTIIPEKSK-----VVTISPTDTVLMATKKMLELRLSSAV 179
+G T E+L E F + ++ I+ EK + + S DTV A K M + + +
Sbjct: 40 TGQATTKESLEEHGFESTTIADILKEKGQQADGSWLWCSVDDTVYDAVKSMTAHNVGALL 99
Query: 180 V---TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATI--DTPIVDALHI 234
V E K GI+T +D L ++I Q + +T V +MT + T+ DT ++ A+ +
Sbjct: 100 VVKSGAEKKLAGIITERDYLRKIIVQGRSSKTTKVGDIMTEENKLITVKPDTKVLRAMEL 159
Query: 235 MHDGKFLHLPVVDRDG--DVVDVVDVI 259
M D + H+PVV+ G +V + DV+
Sbjct: 160 MTDNRIRHIPVVEESGMKGMVSIGDVV 186
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 1 MAARRVDALLLTDSNA--LLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTF--VLS 56
M A V ALL+ S A L GI+T++D ++I + + + T V +MT V
Sbjct: 90 MTAHNVGALLVVKSGAEKKLAGIITERDYLRKIIVQGRSSKTTKVGDIMTEENKLITVKP 149
Query: 57 DTLAVEALQKMVQGKFRHLPVVENGEVIALLDIA 90
DT + A++ M + RH+PVVE + ++ I
Sbjct: 150 DTKVLRAMELMTDNRIRHIPVVEESGMKGMVSIG 183
>gi|384431006|ref|YP_005640366.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Thermus thermophilus
SG0.5JP17-16]
gi|333966474|gb|AEG33239.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Thermus thermophilus
SG0.5JP17-16]
Length = 585
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 137 ERMFRPSLSTIIPE--KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKD 194
ER+ P L+ + E + V + PT +V A ++M E +SS + V +P GILT +D
Sbjct: 129 ERVLEPGLARPVGELVQRPPVFVDPTASVEEAARRMREEGISS--LLVRGEPLGILTDRD 186
Query: 195 ILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVD 254
+ RV+++ LP ST V +V T DTP+++A+ M + + HLP+ + V
Sbjct: 187 LRNRVLAEGLP-PSTPVGQVATRPTFTLPADTPLLEAVAAMLERRIHHLPLTRGEAVVGV 245
Query: 255 VVDVIHITHAAVATEILLDQIMR 277
V + H A + LL ++ R
Sbjct: 246 VTHTDLLAHQAQSPLALLRRVER 268
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 19 CGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVL-SDTLAVEALQKMVQGKFRHLPV 77
GILTD+D+ RV+A L TPV +V TR PTF L +DT +EA+ M++ + HLP+
Sbjct: 179 LGILTDRDLRNRVLAEGLP-PSTPVGQVATR-PTFTLPADTPLLEAVAAMLERRIHHLPL 236
Query: 78 VENGEVIA 85
V+
Sbjct: 237 TRGEAVVG 244
>gi|384433451|ref|YP_005642809.1| putative signal transduction protein [Sulfolobus solfataricus 98/2]
gi|261601605|gb|ACX91208.1| putative signal transduction protein with CBS domains [Sulfolobus
solfataricus 98/2]
Length = 132
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL 210
K++V+T+ + T+ M + + S +V KP GI+T +D++ R I + D T+
Sbjct: 14 KTRVITVGRNTMLKEVTRIMTDNNVGSVIVVDNGKPIGIITERDVV-RAIGKGKSLD-TI 71
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
E++MT + D+PI AL +M HLPV+D DG++ ++ + I A
Sbjct: 72 AEEIMTASLITIKEDSPITGALSLMRTYNIRHLPVIDYDGNLRGIISIRDIARA 125
>gi|365885552|ref|ZP_09424547.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
gi|365285773|emb|CCD97078.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
Length = 142
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A R++ A+L+ S + GIL+++DI + R PVS VMTR
Sbjct: 30 LADRKIGAVLVM-SGTRMEGILSERDIVRSLGERGAAALTEPVSSVMTRRVVSCRPQDTV 88
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIA 90
E ++ M GKFRHLPV+E G V+ L+ I
Sbjct: 89 AEIMEMMTNGKFRHLPVIEGGLVVGLISIG 118
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
KV ++ T+ A K + + ++ + +V + GIL+ +DI+ + + A + V
Sbjct: 13 KVESVEAQTTLAEAAKLLADRKIGAVLVMSGTRMEGILSERDIVRSLGERGAAALTEPVS 72
Query: 213 KVMTPNP-ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
VMT C DT + + + +M +GKF HLPV++ G VV ++ +
Sbjct: 73 SVMTRRVVSCRPQDT-VAEIMEMMTNGKFRHLPVIE-GGLVVGLISI 117
>gi|365890914|ref|ZP_09429396.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
gi|365333221|emb|CCE01927.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
Length = 142
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVL-SDTL 59
+A RR+ A+L+ + + GIL+++DI + R PVS VMTR +DT+
Sbjct: 30 LADRRIGAVLVM-AGTRMEGILSERDIVRSLGERGAAALTEPVSSVMTRRVVSCRPADTV 88
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIA 90
A E ++ M GKFRHLPV+E G V+ L+ I
Sbjct: 89 A-EIMEMMTNGKFRHLPVIEGGLVVGLISIG 118
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
KV ++ T+ A K + + R+ + +V + GIL+ +DI+ + + A + V
Sbjct: 13 KVESVEAQTTLAEAAKLLADRRIGAVLVMAGTRMEGILSERDIVRSLGERGAAALTEPVS 72
Query: 213 KVMTPNP-ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
VMT C DT + + + +M +GKF HLPV++ G VV ++ +
Sbjct: 73 SVMTRRVVSCRPADT-VAEIMEMMTNGKFRHLPVIE-GGLVVGLISI 117
>gi|338975121|ref|ZP_08630476.1| inosine-5'-monophosphate dehydrogenase [Bradyrhizobiaceae bacterium
SG-6C]
gi|414167425|ref|ZP_11423653.1| hypothetical protein HMPREF9696_01508 [Afipia clevelandensis ATCC
49720]
gi|338231720|gb|EGP06855.1| inosine-5'-monophosphate dehydrogenase [Bradyrhizobiaceae bacterium
SG-6C]
gi|410889757|gb|EKS37558.1| hypothetical protein HMPREF9696_01508 [Afipia clevelandensis ATCC
49720]
Length = 142
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
++ RR+ A+++ S + GIL+++D+ + R + E PV VMT + +T
Sbjct: 30 LSERRIGAVMVM-SGQKIEGILSERDVVRVLGERGSGVLEEPVRGVMT-SKVITCRETDT 87
Query: 61 VEALQK-MVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
V A+ + M GKFRHLPVVEN ++ L+ I + +A ER E
Sbjct: 88 VSAIMEVMTAGKFRHLPVVENERIVGLISIGDVVKWRVAEYEREQE 133
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 20/115 (17%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNL------PA 206
+V+++SP + A K + E R+ + +V K GIL+ +D++ RV+ + P
Sbjct: 13 QVISVSPDAKLSAAIKILSERRIGAVMVMSGQKIEGILSERDVV-RVLGERGSGVLEEPV 71
Query: 207 DSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD--------GDVV 253
+ KV+T C DT + + +M GKF HLPVV+ + GDVV
Sbjct: 72 RGVMTSKVIT----CRETDT-VSAIMEVMTAGKFRHLPVVENERIVGLISIGDVV 121
>gi|379706287|ref|YP_005261492.1| hypothetical protein NOCYR_0023 [Nocardia cyriacigeorgica GUH-2]
gi|374843786|emb|CCF60848.1| conserved protein of unknown function; putative CBS domain
[Nocardia cyriacigeorgica GUH-2]
Length = 139
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA V +L++ D N +CGI+TD+DI + IA+ L+ T +++ P ++ +D
Sbjct: 28 MAELGVGSLVIADENERMCGIITDRDIVVKCIAQGLSPSGTRAAELCEATPRWISADADV 87
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL---DIAKCLYD 95
E L +M + + +PV+EN +I ++ D+A+ L D
Sbjct: 88 DEVLDEMETHQVKRMPVIENKRLIGMISEADLARHLDD 125
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 157 ISPTDTVLMATKKMLELRLSSAVVTVENKPR-GILTSKDILMRVISQNLPADSTLVEKVM 215
IS TV A + M EL + S V+ EN+ GI+T +DI+++ I+Q L T ++
Sbjct: 15 ISRDQTVAQAARVMAELGVGSLVIADENERMCGIITDRDIVVKCIAQGLSPSGTRAAELC 74
Query: 216 TPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
P + D + + L M + +PV++
Sbjct: 75 EATPRWISADADVDEVLDEMETHQVKRMPVIE 106
>gi|433463254|ref|ZP_20420813.1| hypothetical protein D479_16679 [Halobacillus sp. BAB-2008]
gi|432187764|gb|ELK45021.1| hypothetical protein D479_16679 [Halobacillus sp. BAB-2008]
Length = 142
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M R V A+ + D L G++TD+D+A R A + + TP+ +VM+ + DT
Sbjct: 28 MKERNVGAIPICDEQGNLMGMVTDRDLAIRGYAAK-QPDSTPIQQVMSDHMYNCSPDTSL 86
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIA 90
EA + M Q + R LPVVENG+++ +L +
Sbjct: 87 EEASRIMAQHQIRRLPVVENGKLVGMLSLG 116
>gi|429211285|ref|ZP_19202451.1| putative CBS domain protein [Pseudomonas sp. M1]
gi|428158699|gb|EKX05246.1| putative CBS domain protein [Pseudomonas sp. M1]
Length = 145
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + V AL + D N + G+++++D A ++I + + TPVS +M+ V S
Sbjct: 32 MAVKNVGALPVVD-NGQVVGVVSERDYARKMILQGRSSVGTPVSAIMSSPVVTVDSQQNV 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
+ M + RHLPVVENG+++ LL I + +AIA
Sbjct: 91 DTCMSIMTERHLRHLPVVENGQLVGLLSIGDLVKEAIA 128
>gi|294667435|ref|ZP_06732652.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292602768|gb|EFF46202.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 119
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 62/100 (62%), Gaps = 6/100 (6%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVL-SDTL 59
MA + V A+L+ + L+ GI++++D A +V+ R+ + T V+++M+ V SDT+
Sbjct: 8 MAEKAVGAVLVMEGPRLV-GIVSERDYARKVVLRDRSSSTTSVAEIMSAEVVTVSPSDTV 66
Query: 60 AVEALQKMVQGKFRHLPVVENGE---VIALLDIAKCLYDA 96
+Q M G+FRHLPVVENG VI++ D+ K + +A
Sbjct: 67 E-RCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEA 105
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 11/117 (9%)
Query: 164 LMATKKMLELRLSSAVVTVENKPR--GILTSKDILMRVISQNLPADSTLVEKVMTPNPEC 221
LMA K + AV+ +E PR GI++ +D +V+ ++ + +T V ++M+
Sbjct: 7 LMAEKAV------GAVLVMEG-PRLVGIVSERDYARKVVLRDRSSSTTSVAEIMSAEVVT 59
Query: 222 ATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV-ATEILLDQIMR 277
+ + + +M DG+F HLPVV+ +G V V+ + + A + A +DQ+ R
Sbjct: 60 VSPSDTVERCMQLMTDGRFRHLPVVE-NGRVQGVISIGDLVKAVIEAQRQDIDQLQR 115
>gi|289583502|ref|YP_003481912.1| signal transduction protein [Natrialba magadii ATCC 43099]
gi|448281589|ref|ZP_21472891.1| signal transduction protein [Natrialba magadii ATCC 43099]
gi|289533000|gb|ADD07350.1| putative signal transduction protein with CBS domains [Natrialba
magadii ATCC 43099]
gi|445578194|gb|ELY32606.1| signal transduction protein [Natrialba magadii ATCC 43099]
Length = 407
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 17/200 (8%)
Query: 8 ALLLTDSNALLCGILTDKDIATRVI------ARELNLEETPVSKVMTRNPTFVLSDTLAV 61
A L+ DS + L + D + V A + L+ VS+ + + + +
Sbjct: 84 AQLMNDSGSQLLPVFEDDEFRGVVTVDGILEAVQPYLDAATVSEAASTDLRTLSPNARLG 143
Query: 62 EALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAI---ARMERAAEKGKAIAAAVEGVE 118
EAL + HLPVV+NG + +L LYD R E ++ G A G E
Sbjct: 144 EALNTFRENHITHLPVVDNGSAVGIL----SLYDVTDLTVRAEVRSQGGDAGGVDPFGGE 199
Query: 119 KHWGTSISGPNTFI--ETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLS 176
T+ + F E RERM + ++ + V T+SP++T+ ++M E+ S
Sbjct: 200 ISSSTARARRGGFGAREGERERMLDFPVQDVM--ATPVRTVSPSETLETVVEEMFEVNAS 257
Query: 177 SAVVTVENKPRGILTSKDIL 196
S VVT + P GI+T D+L
Sbjct: 258 SLVVTDDGSPHGIVTKTDVL 277
>gi|375263425|ref|YP_005025655.1| cyclic nucleotide binding protein/2 CBS domains [Vibrio sp. EJY3]
gi|369843852|gb|AEX24680.1| cyclic nucleotide binding protein/2 CBS domains [Vibrio sp. EJY3]
Length = 620
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPV 77
L GI+T++D+ RVIA+ +N + P+S VMT NP + S T +EA++ M+Q R LPV
Sbjct: 194 LLGIVTERDMTKRVIAQCMNYSQ-PISTVMTSNPLTITSGTSMLEAIETMMQHNVRSLPV 252
Query: 78 VENGEV 83
V G V
Sbjct: 253 VNAGRV 258
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 155 VTISPTDTVLMATKK-MLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+ I DT + T + M++ SSA++ ++ GI+T +D+ RVI+Q + S +
Sbjct: 162 MAIVSADTSIDETARVMVKEHRSSALIMQGHELLGIVTERDMTKRVIAQCMNY-SQPIST 220
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIH-ITHAAVATEILL 272
VMT NP T T +++A+ M LPVV+ G V +V + + V L+
Sbjct: 221 VMTSNPLTITSGTSMLEAIETMMQHNVRSLPVVN-AGRVQGIVTATSMVERSQVQAVFLI 279
Query: 273 DQIMRQQA 280
+I R+++
Sbjct: 280 SRIYRKES 287
>gi|406922552|gb|EKD60005.1| cbs [uncultured bacterium]
Length = 139
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 58/105 (55%), Gaps = 7/105 (6%)
Query: 6 VDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQ 65
V A+L+ AL+ G+++++D+ + I ++ + + T V ++MT +P V + +AL
Sbjct: 36 VGAVLVLKGEALV-GLVSERDVIRKCIGQDRHSDSTLVDEIMTVDPKTVQASDGLNDALA 94
Query: 66 KMVQGKFRHLPVVENGEVIALLDI------AKCLYDAIARMERAA 104
M QG FRH+PV+E G I LL I + +Y+ M + A
Sbjct: 95 HMTQGHFRHMPVLEAGRCIGLLSIRDVPTEYRMMYERFLEMRQKA 139
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Query: 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMR 198
MF S+ ++ + +V ++ TV A + + + +V G+++ +D++ +
Sbjct: 1 MFIRSVKDVVAGR-EVPSVQSGATVRQACHVLDHFNVGAVLVLKGEALVGLVSERDVIRK 59
Query: 199 VISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
I Q+ +DSTLV+++MT +P+ + DAL M G F H+PV++
Sbjct: 60 CIGQDRHSDSTLVDEIMTVDPKTVQASDGLNDALAHMTQGHFRHMPVLE 108
>gi|85710353|ref|ZP_01041418.1| CBS domain protein [Erythrobacter sp. NAP1]
gi|85689063|gb|EAQ29067.1| CBS domain protein [Erythrobacter sp. NAP1]
Length = 620
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 170 MLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIV 229
M+E +S+ + GI T KDI RV++ +P D + VMT NP +PI
Sbjct: 179 MVEHDVSTLAICDNGALAGIFTDKDIRKRVVADAVPFDHP-ISAVMTANPRTLPQHSPIA 237
Query: 230 DALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
+A+ +M G F HLP++D G ++ +V I A
Sbjct: 238 EAMALMASGGFRHLPILDDSGALMGIVSATDILAA 272
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 15 NALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRH 74
N L GI TDKDI RV+A + + P+S VMT NP + + EA+ M G FRH
Sbjct: 192 NGALAGIFTDKDIRKRVVADAVPFDH-PISAVMTANPRTLPQHSPIAEAMALMASGGFRH 250
Query: 75 LPVVEN 80
LP++++
Sbjct: 251 LPILDD 256
>gi|254467423|ref|ZP_05080833.1| CBS domain protein [Rhodobacterales bacterium Y4I]
gi|206684424|gb|EDZ44907.1| CBS domain protein [Rhodobacterales bacterium Y4I]
Length = 174
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVI---SQNLPADST 209
+ I P DTV A + + + R+ + VVT +N +GIL+ +DI+ R+ LP
Sbjct: 46 IFAIRPNDTVGHAVEALRDKRIGALVVTDQNGALQGILSERDIVRRLAETPGHTLP---Q 102
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVV--DRDGDVVDVVDVIHITHAAVA 267
LVE +MT + D ++D +M++G+F HLPVV DR ++ V DV++ +
Sbjct: 103 LVEDIMTREVKTCKPDDLLIDVAKVMNEGRFRHLPVVKDDRLCGMITVGDVVNFRLQELE 162
Query: 268 TEIL 271
E L
Sbjct: 163 YEAL 166
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 14/108 (12%)
Query: 4 RRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETP-------VSKVMTRNPTFVLS 56
+R+ AL++TD N L GIL+++DI R L ETP V +MTR
Sbjct: 65 KRIGALVVTDQNGALQGILSERDIVRR-------LAETPGHTLPQLVEDIMTREVKTCKP 117
Query: 57 DTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAA 104
D L ++ + M +G+FRHLPVV++ + ++ + + + +E A
Sbjct: 118 DDLLIDVAKVMNEGRFRHLPVVKDDRLCGMITVGDVVNFRLQELEYEA 165
>gi|21243772|ref|NP_643354.1| hypothetical protein XAC3045 [Xanthomonas axonopodis pv. citri str.
306]
gi|21109361|gb|AAM37890.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 142
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + A+L+ + L+ GI++++D A +V+ R+ + T V+++M+ V
Sbjct: 31 MAEKAIGAVLVMEGPRLV-GIVSERDYARKVVLRDRSSSTTSVAQIMSGEVVTVSPSETV 89
Query: 61 VEALQKMVQGKFRHLPVVENGE---VIALLDIAKCLYDA 96
+Q M G+FRHLPVVENG VI++ D+ K + +A
Sbjct: 90 ERCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEA 128
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 164 LMATKKMLELRLSSAVVTVENKPR--GILTSKDILMRVISQNLPADSTLVEKVMTPNPEC 221
LMA K + AV+ +E PR GI++ +D +V+ ++ + +T V ++M+
Sbjct: 30 LMAEKAI------GAVLVMEG-PRLVGIVSERDYARKVVLRDRSSSTTSVAQIMSGEVVT 82
Query: 222 ATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV-ATEILLDQIMR 277
+ + + +M DG+F HLPVV+ +G V V+ + + A + A + +DQ+ R
Sbjct: 83 VSPSETVERCMQLMTDGRFRHLPVVE-NGRVQGVISIGDLVKAVIEAQQQDIDQLQR 138
>gi|330505788|ref|YP_004382657.1| hypothetical protein [Pseudomonas mendocina NK-01]
gi|328920074|gb|AEB60905.1| CBS domain-containing protein [Pseudomonas mendocina NK-01]
Length = 639
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 15 NALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRH 74
N ++ GILTD+D+ TRV+A L +TPVS+VMT P V +D EA+ M++ H
Sbjct: 207 NQVMAGILTDRDLRTRVLAEGLP-GDTPVSQVMTPGPVTVQADESVFEAMLCMLRNNIHH 265
Query: 75 LPVVENGEVIALLDIA 90
LPV++ + ++ +A
Sbjct: 266 LPVLQRRRPVGMISLA 281
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 188 GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
GILT +D+ RV+++ LP D T V +VMTP P D + +A+ M HLPV+
Sbjct: 212 GILTDRDLRTRVLAEGLPGD-TPVSQVMTPGPVTVQADESVFEAMLCMLRNNIHHLPVLQ 270
Query: 248 RDGDV--VDVVDVI 259
R V + + DVI
Sbjct: 271 RRRPVGMISLADVI 284
>gi|344340880|ref|ZP_08771803.1| putative signal transduction protein with CBS domains [Thiocapsa
marina 5811]
gi|343799125|gb|EGV17076.1| putative signal transduction protein with CBS domains [Thiocapsa
marina 5811]
Length = 144
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA RV A+ + D+ L+ G+ T++D+ RV+A+ L + +S VMT P V
Sbjct: 31 MAAHRVGAIPVVDAGKLV-GLFTERDLLNRVVAKRLQPVDVLLSAVMTERPISVEPGVSL 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
VE L M + FRHLPV+ V+ +L
Sbjct: 90 VEGLGIMSENGFRHLPVLAENRVLGVL 116
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
+ +++ P +V A + M R+ + V K G+ T +D+L RV+++ L L+
Sbjct: 14 ETISLGPQSSVQEAAELMAAHRVGAIPVVDAGKLVGLFTERDLLNRVVAKRLQPVDVLLS 73
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVV 246
VMT P +V+ L IM + F HLPV+
Sbjct: 74 AVMTERPISVEPGVSLVEGLGIMSENGFRHLPVL 107
>gi|153009268|ref|YP_001370483.1| hypothetical protein Oant_1938 [Ochrobactrum anthropi ATCC 49188]
gi|151561156|gb|ABS14654.1| CBS domain containing protein [Ochrobactrum anthropi ATCC 49188]
Length = 143
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 55/101 (54%)
Query: 5 RVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEAL 64
++ AL++ D + GIL+++D+ V A+E PV++VMT + +
Sbjct: 34 KIGALVVCDEAGRIKGILSERDVVRAVAAQETKAMSMPVTEVMTAKVQVCREHHTINQVM 93
Query: 65 QKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
+ M + +FRH+PV E+G+++ ++ I + I +ER AE
Sbjct: 94 EIMTRSRFRHMPVEEHGKLVGIISIGDVVKRRIEDVEREAE 134
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 143 SLSTIIPEKSK-VVTISPTDTVLMATKKMLELRLSSAVVTVE-NKPRGILTSKDILMRVI 200
++ +I+ K + VV I+P DT+ A + + ++ + VV E + +GIL+ +D++ V
Sbjct: 2 TVRSILETKGRDVVVIAPADTLSHAVAMLNKHKIGALVVCDEAGRIKGILSERDVVRAVA 61
Query: 201 SQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+Q A S V +VMT + I + IM +F H+P V+ G +V ++ +
Sbjct: 62 AQETKAMSMPVTEVMTAKVQVCREHHTINQVMEIMTRSRFRHMP-VEEHGKLVGIISI 118
>gi|418056117|ref|ZP_12694171.1| putative signal transduction protein with CBS domains
[Hyphomicrobium denitrificans 1NES1]
gi|353210395|gb|EHB75797.1| putative signal transduction protein with CBS domains
[Hyphomicrobium denitrificans 1NES1]
Length = 139
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + V ++L+ D + L GI T +D A +++A+ T ++ MT NP ++ + A
Sbjct: 31 MRVKHVGSVLVVDEHQRLLGIFTGRD-AVKLLAKGKG-GRTALANAMTPNPVTLIPEQQA 88
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIA 90
++AL+ M G FRH+PVVE G ++ ++ A
Sbjct: 89 IDALRAMSDGGFRHVPVVEKGRIVGIVSRA 118
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 157 ISPTDTVLMATKKMLELRLSSAVVTVENKPR-GILTSKDILMRVISQNLPADSTLVEKVM 215
+ DTV A + M + S +V E++ GI T +D + +++++ T + M
Sbjct: 18 MQAADTVQNACEAMRVKHVGSVLVVDEHQRLLGIFTGRDAV-KLLAKG-KGGRTALANAM 75
Query: 216 TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
TPNP + +DAL M DG F H+PVV++ G +V +V
Sbjct: 76 TPNPVTLIPEQQAIDALRAMSDGGFRHVPVVEK-GRIVGIV 115
>gi|325925784|ref|ZP_08187157.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas perforans 91-118]
gi|325543841|gb|EGD15251.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas perforans 91-118]
Length = 135
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVL-SDTL 59
MA + + A+L+ + L+ GI++++D A +V+ R+ T V+++M+ V SDT+
Sbjct: 24 MAEKAIGAVLVMEGTRLV-GIVSERDYARKVVLRDRASSTTSVAEIMSAEVVTVTPSDTV 82
Query: 60 AVEALQKMVQGKFRHLPVVENGE---VIALLDIAKCLYDA 96
+Q M G+FRHLPVVENG VI++ D+ K + +A
Sbjct: 83 E-RCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEA 121
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 188 GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
GI++ +D +V+ ++ + +T V ++M+ T + + +M DG+F HLPVV+
Sbjct: 42 GIVSERDYARKVVLRDRASSTTSVAEIMSAEVVTVTPSDTVERCMQLMTDGRFRHLPVVE 101
Query: 248 RDGDVVDVVDVIHITHAAV-ATEILLDQIMR 277
+G V V+ + + A + A +DQ+ R
Sbjct: 102 -NGRVQGVISIGDLVKAVIEAQRQDIDQLQR 131
>gi|149375574|ref|ZP_01893344.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Marinobacter
algicola DG893]
gi|149360279|gb|EDM48733.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Marinobacter
algicola DG893]
Length = 624
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 1 MAARRVDALLLTDSNA---LLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSD 57
M R V ALLL D + L GI+TD+D+ TR + L ETP+S +MT S+
Sbjct: 176 MTERGVSALLLMDESGKQPRLSGIITDRDLRTRALCEALP-SETPISDIMTEELITTRSN 234
Query: 58 TLAVEALQKMVQGKFRHLPVVENGE---VIALLDIAK 91
EA+ M+ HLPV+E + VIAL DI K
Sbjct: 235 AFIFEAMLTMLHNNVHHLPVMEGDKVRGVIALSDIVK 271
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 136 RERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVE---NKPR--GIL 190
RE+ +P + + S+ ++P L +++ R SA++ ++ +PR GI+
Sbjct: 141 REKSNQPMTARVTRLISREPVMAPNTVRLQEAARIMTERGVSALLLMDESGKQPRLSGII 200
Query: 191 TSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG 250
T +D+ R + + LP++ T + +MT + I +A+ M HLPV++ D
Sbjct: 201 TDRDLRTRALCEALPSE-TPISDIMTEELITTRSNAFIFEAMLTMLHNNVHHLPVMEGDK 259
Query: 251 --DVVDVVDVIHITHAAVATEILLDQIMRQQ 279
V+ + D+ + H + ++ L+ I QQ
Sbjct: 260 VRGVIALSDI--VKHESQSSLYLVSNIYHQQ 288
>gi|84685642|ref|ZP_01013539.1| CBS domain protein [Maritimibacter alkaliphilus HTCC2654]
gi|84666308|gb|EAQ12781.1| CBS domain protein [Rhodobacterales bacterium HTCC2654]
Length = 173
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAV-VTVENKPRGILTSKDILMRVISQNLPADSTL 210
+++TI P T+ A + + R+ + + V E K GIL+ +DI+ ++ Q
Sbjct: 43 GRIITIHPEQTLHDAVVLLRDNRIGALLCVDEEGKLAGILSERDIVRKLADQPGKTLPHR 102
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG--DVVDVVDVIHI 261
VE+VMT E T D P+V L +M +G+F H+PVVD D ++ + DV+H
Sbjct: 103 VEEVMTRTVETCTADEPLVVVLRLMTEGRFRHMPVVDGDALIGMITIGDVVHF 155
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%)
Query: 5 RVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEAL 64
R+ ALL D L GIL+++DI ++ + V +VMTR +D V L
Sbjct: 65 RIGALLCVDEEGKLAGILSERDIVRKLADQPGKTLPHRVEEVMTRTVETCTADEPLVVVL 124
Query: 65 QKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAA 104
+ M +G+FRH+PVV+ +I ++ I ++ + ++E A
Sbjct: 125 RLMTEGRFRHMPVVDGDALIGMITIGDVVHFRLNQLELEA 164
>gi|20093963|ref|NP_613810.1| CBS-domain-containing protein [Methanopyrus kandleri AV19]
gi|20178342|sp|P50100.2|Y525_METKA RecName: Full=Uncharacterized protein MK0525; AltName: Full=OrfX
gi|19886922|gb|AAM01740.1| CBS-domain-containing protein [Methanopyrus kandleri AV19]
Length = 196
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVE-NKPRGILTSKDILMRVISQNLPADST 209
+ V+T SPT+T + KM E + S V+ E ++P GI+T +D++++V+SQ D
Sbjct: 11 RRDVITGSPTETAVEIAYKMREHGIGSVVIVNEKDEPIGIITERDLVIKVVSQGKNPDEV 70
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV---DVIHITHAAV 266
+ +M+ D + +A+ +M D LP+VD +G ++ +V D++ + V
Sbjct: 71 IARDIMSQPVITVEEDMEVNEAVKLMVDKGIRRLPIVDDNGKLIGIVTMQDILQVEPYLV 130
Query: 267 AT 268
AT
Sbjct: 131 AT 132
>gi|389776666|ref|ZP_10194097.1| putative signal transduction protein [Rhodanobacter spathiphylli
B39]
gi|388436468|gb|EIL93332.1| putative signal transduction protein [Rhodanobacter spathiphylli
B39]
Length = 142
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA RV ALL+ L+ G+++++D A +VI + + +T VS +MT P V DT
Sbjct: 31 MAEHRVGALLVMHGEKLV-GVMSERDYARKVILQGRSSSQTAVSDIMTGTPLTVGPDTDV 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL---DIAKCLYDAIA 98
+ ++ + RHLPVVE V+ ++ D+ K + DA A
Sbjct: 90 FDCMRLCTDSRIRHLPVVEGDTVVGVISIGDLVKAVIDAQA 130
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+ ++P VL A K M E R+ + +V K G+++ +D +VI Q + T V
Sbjct: 15 IYRVAPETPVLEAIKHMAEHRVGALLVMHGEKLVGVMSERDYARKVILQGRSSSQTAVSD 74
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+MT P DT + D + + D + HLPVV+ D VV V+ +
Sbjct: 75 IMTGTPLTVGPDTDVFDCMRLCTDSRIRHLPVVEGD-TVVGVISI 118
>gi|418519453|ref|ZP_13085505.1| hypothetical protein WS7_00250 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410704897|gb|EKQ63376.1| hypothetical protein WS7_00250 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
Length = 145
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + A+L+ + L+ GI++++D A +V+ R+ + T V+++M+ V
Sbjct: 34 MAEKAIGAVLVMEGPRLV-GIVSERDYARKVVLRDRSSSTTSVAQIMSAEVVTVSPSETV 92
Query: 61 VEALQKMVQGKFRHLPVVENGE---VIALLDIAKCLYDA 96
+Q M G+FRHLPVVENG VI++ D+ K + +A
Sbjct: 93 ERCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEA 131
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 164 LMATKKMLELRLSSAVVTVENKPR--GILTSKDILMRVISQNLPADSTLVEKVMTPNPEC 221
LMA K + AV+ +E PR GI++ +D +V+ ++ + +T V ++M+
Sbjct: 33 LMAEKAI------GAVLVMEG-PRLVGIVSERDYARKVVLRDRSSSTTSVAQIMSAEVVT 85
Query: 222 ATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV-ATEILLDQIMR 277
+ + + +M DG+F HLPVV+ +G V V+ + + A + A + +DQ+ R
Sbjct: 86 VSPSETVERCMQLMTDGRFRHLPVVE-NGRVQGVISIGDLVKAVIEAQQQDIDQLQR 141
>gi|381169714|ref|ZP_09878877.1| CBS domain [Xanthomonas citri pv. mangiferaeindicae LMG 941]
gi|390990846|ref|ZP_10261124.1| CBS domain [Xanthomonas axonopodis pv. punicae str. LMG 859]
gi|418518832|ref|ZP_13084964.1| hypothetical protein MOU_18761 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|372554389|emb|CCF68099.1| CBS domain [Xanthomonas axonopodis pv. punicae str. LMG 859]
gi|380689732|emb|CCG35364.1| CBS domain [Xanthomonas citri pv. mangiferaeindicae LMG 941]
gi|410702120|gb|EKQ60630.1| hypothetical protein MOU_18761 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 142
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + A+L+ + L+ GI++++D A +V+ R+ + T V+++M+ V
Sbjct: 31 MAEKAIGAVLVMEGPRLV-GIVSERDYARKVVLRDRSSSTTSVAQIMSAEVVTVSPSETV 89
Query: 61 VEALQKMVQGKFRHLPVVENGE---VIALLDIAKCLYDA 96
+Q M G+FRHLPVVENG VI++ D+ K + +A
Sbjct: 90 ERCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEA 128
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 164 LMATKKMLELRLSSAVVTVENKPR--GILTSKDILMRVISQNLPADSTLVEKVMTPNPEC 221
LMA K + AV+ +E PR GI++ +D +V+ ++ + +T V ++M+
Sbjct: 30 LMAEKAI------GAVLVMEG-PRLVGIVSERDYARKVVLRDRSSSTTSVAQIMSAEVVT 82
Query: 222 ATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV-ATEILLDQIMR 277
+ + + +M DG+F HLPVV+ +G V V+ + + A + A + +DQ+ R
Sbjct: 83 VSPSETVERCMQLMTDGRFRHLPVVE-NGRVQGVISIGDLVKAVIEAQQQDIDQLQR 138
>gi|334131314|ref|ZP_08505079.1| CBS domain containing membrane protein [Methyloversatilis
universalis FAM5]
gi|333443663|gb|EGK71625.1| CBS domain containing membrane protein [Methyloversatilis
universalis FAM5]
Length = 143
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA R + A+L+TD N L GI +++D A +V+ + + TPV +MT V D
Sbjct: 31 MANRGIGAVLVTD-NGALAGIFSERDYARKVVLQGKDSSSTPVRDIMTSKLIHVTPDMTV 89
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAI 97
+A+Q M + RHLPV++ G +I ++ I + + I
Sbjct: 90 DQAMQLMSDKRIRHLPVLDGAGSLIGVVSIGDLVKETI 127
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Query: 143 SLSTIIPEKSK-VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVIS 201
+++ +I K+ V T+ +TV+ A + M + + +VT GI + +D +V+
Sbjct: 3 TIAQVIEGKTGPVATVEADNTVVSALRVMANRGIGAVLVTDNGALAGIFSERDYARKVVL 62
Query: 202 QNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
Q + ST V +MT T D + A+ +M D + HLPV+D G ++ VV +
Sbjct: 63 QGKDSSSTPVRDIMTSKLIHVTPDMTVDQAMQLMSDKRIRHLPVLDGAGSLIGVVSI 119
>gi|85710703|ref|ZP_01041767.1| putative signal-transduction protein with CBS domains
[Erythrobacter sp. NAP1]
gi|85687881|gb|EAQ27886.1| putative signal-transduction protein with CBS domains
[Erythrobacter sp. NAP1]
Length = 172
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILMRVISQNLPADST 209
K+ +T +P V A +M E S VT +N+ G++T +DI RVI + +T
Sbjct: 12 KAPPLTCTPDTIVFDAVTQMAEKNFGSIFVTDPDNRVLGVMTERDIFRRVIGASRDPKTT 71
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
V +VMT A D I+D + IM + +F LP+VD D ++ V+
Sbjct: 72 PVSEVMTTEVRAAHKDDQILDWMQIMSNERFRRLPIVDEDKRLIAVM 118
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + ++ +TD + + G++T++DI RVI + + TPVS+VMT D
Sbjct: 31 MAEKNFGSIFVTDPDNRVLGVMTERDIFRRVIGASRDPKTTPVSEVMTTEVRAAHKDDQI 90
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALL 87
++ +Q M +FR LP+V E+ +IA++
Sbjct: 91 LDWMQIMSNERFRRLPIVDEDKRLIAVM 118
>gi|374331449|ref|YP_005081633.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Pseudovibrio
sp. FO-BEG1]
gi|359344237|gb|AEV37611.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Pseudovibrio
sp. FO-BEG1]
Length = 609
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 5 RVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEAL 64
RV +L +TD L GI+T +D++ +V+A EL++E T V VMT NP ++ + + L
Sbjct: 172 RVSSLCVTDDEGRLIGIITVRDLSFKVLASELSVE-TLVEAVMTANPITLVPSAIGSDLL 230
Query: 65 QKMVQGKFRHLPVVENGEVIALL 87
M++ + H+P+VE G ++ ++
Sbjct: 231 HLMMERRIGHVPIVEGGHLVGMV 253
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 70/126 (55%), Gaps = 4/126 (3%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTL 210
S +T P DTV A ++M + R+SS VT E + GI+T +D+ +V++ L + TL
Sbjct: 150 SNPLTCRPEDTVKQAAQQMRDARVSSLCVTDDEGRLIGIITVRDLSFKVLASELSVE-TL 208
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITH-AAVATE 269
VE VMT NP D LH+M + + H+P+V+ G +V +V +T A+++
Sbjct: 209 VEAVMTANPITLVPSAIGSDLLHLMMERRIGHVPIVE-GGHLVGMVTQTDLTRFQAISSA 267
Query: 270 ILLDQI 275
L+ QI
Sbjct: 268 ELVSQI 273
>gi|352079994|ref|ZP_08951063.1| putative signal transduction protein with CBS domains
[Rhodanobacter sp. 2APBS1]
gi|389797851|ref|ZP_10200888.1| signal transduction protein [Rhodanobacter sp. 116-2]
gi|351684703|gb|EHA67772.1| putative signal transduction protein with CBS domains
[Rhodanobacter sp. 2APBS1]
gi|388446514|gb|EIM02543.1| signal transduction protein [Rhodanobacter sp. 116-2]
Length = 142
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA R+ ALL+ L+ G+++++D A +VI + + +T VS +M+ P V DT
Sbjct: 31 MAEHRIGALLVMRGEQLV-GVMSERDYARKVILQGRSSSQTAVSDIMSGPPLTVSPDTDV 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL---DIAKCLYDAIA 98
+ ++ + RHLPVV +G+V+ ++ D+ K + DA A
Sbjct: 90 FDCMRLCTDSRIRHLPVVHDGKVVGVISIGDLVKAVIDAQA 130
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+ +I+P VL A K M E R+ + +V + G+++ +D +VI Q + T V
Sbjct: 15 IYSIAPEAPVLDAIKHMAEHRIGALLVMRGEQLVGVMSERDYARKVILQGRSSSQTAVSD 74
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+M+ P + DT + D + + D + HLPVV DG VV V+ +
Sbjct: 75 IMSGPPLTVSPDTDVFDCMRLCTDSRIRHLPVV-HDGKVVGVISI 118
>gi|46198773|ref|YP_004440.1| cyclic nucleotide binding protein/CBS domain-containing proteins
[Thermus thermophilus HB27]
gi|46196396|gb|AAS80813.1| cyclic nucleotide binding protein/2 cbs domains [Thermus
thermophilus HB27]
Length = 585
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 77/144 (53%), Gaps = 7/144 (4%)
Query: 137 ERMFRPSLSTIIPE--KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKD 194
E++ P L+ + E + V + PT +V A ++M E +SS + V +P GILT +D
Sbjct: 129 EKVLEPGLARPVGELVQRPPVFVDPTASVEEAARRMREEGISS--LLVRGEPLGILTDRD 186
Query: 195 ILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVD 254
+ RV+++ LP ST V +V T DTP+++A+ M + + HLP+ R +VV
Sbjct: 187 LRNRVLAEGLP-PSTPVGQVATRPTFTLPADTPLLEAVAAMLERRIHHLPLT-RGEEVVG 244
Query: 255 VVDVIH-ITHAAVATEILLDQIMR 277
VV + H A + LL ++ R
Sbjct: 245 VVTHTDLLAHQAQSPLALLRRVER 268
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 20 GILTDKDIATRVIARELNLEETPVSKVMTRNPTFVL-SDTLAVEALQKMVQGKFRHLPVV 78
GILTD+D+ RV+A L TPV +V TR PTF L +DT +EA+ M++ + HLP+
Sbjct: 180 GILTDRDLRNRVLAEGLP-PSTPVGQVATR-PTFTLPADTPLLEAVAAMLERRIHHLPLT 237
Query: 79 ENGEVIA 85
EV+
Sbjct: 238 RGEEVVG 244
>gi|372281903|ref|ZP_09517939.1| hypothetical protein OS124_19774 [Oceanicola sp. S124]
Length = 144
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 4 RRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEA 63
+R+ ++++ A GIL+++DI + R+ + E S +MTR+P + + +
Sbjct: 34 KRIGGVVVSSDGAHAEGILSERDIVRALAVRDEGVMELAASALMTRDPVCCSLEMNSDQV 93
Query: 64 LQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEK 106
L KM +G+FRH+PVV+ G ++ ++ I + ++++ +AEK
Sbjct: 94 LGKMTEGRFRHMPVVQEGVLVGIVTIGDVVKARLSQL--SAEK 134
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVEN-KPRGILTSKDILMRVISQNLPADSTLVE 212
V T++P T+ + + E R+ VV+ + GIL+ +DI+ + ++
Sbjct: 15 VFTVTPDVTIREVAQILREKRIGGVVVSSDGAHAEGILSERDIVRALAVRDEGVMELAAS 74
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
+MT +P C +++ L M +G+F H+PVV ++G +V +V + + A
Sbjct: 75 ALMTRDPVCCSLEMNSDQVLGKMTEGRFRHMPVV-QEGVLVGIVTIGDVVKA 125
>gi|316933327|ref|YP_004108309.1| hypothetical protein [Rhodopseudomonas palustris DX-1]
gi|315601041|gb|ADU43576.1| CBS domain containing protein [Rhodopseudomonas palustris DX-1]
Length = 142
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A RR+ A+L+ L GIL+++DI + R + PV VMTR+ D
Sbjct: 30 LAERRIGAVLVMHGTRLE-GILSERDIVRVLADRGPAALDQPVGAVMTRDVFTCRQDDNV 88
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
E +++M GKFRHLPV+E+ V+ L+ I + ++ E
Sbjct: 89 GEIMERMTAGKFRHLPVMEHDRVVGLISIGDIVKSRLSEYE 129
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 143 SLSTIIPEKSKVVTISPTDTVLM-ATKKMLELRLSSAVVTVENKPRGILTSKDILMRVIS 201
++ I+ K + + D L A K + E R+ + +V + GIL+ +DI+ RV++
Sbjct: 2 TVRAILESKGRYIHSVEADARLASAIKTLAERRIGAVLVMHGTRLEGILSERDIV-RVLA 60
Query: 202 QNLPAD-STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
PA V VMT + D + + + M GKF HLPV++ D
Sbjct: 61 DRGPAALDQPVGAVMTRDVFTCRQDDNVGEIMERMTAGKFRHLPVMEHD 109
>gi|269103712|ref|ZP_06156409.1| Signal transduction protein [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163610|gb|EEZ42106.1| Signal transduction protein [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 620
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 15 NALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRH 74
N + GI+TD+D+ RVIA ++ + P+++VMTR+P + S L ++A+ M++ R
Sbjct: 195 NQQIIGIITDRDMTKRVIADGVS-TDAPITQVMTRHPYTIGSQDLVLKAVGLMMEHNIRS 253
Query: 75 LPVVENGEVIALL 87
LPVV+N +V+ LL
Sbjct: 254 LPVVDNQQVVGLL 266
>gi|54293724|ref|YP_126139.1| hypothetical protein lpl0777 [Legionella pneumophila str. Lens]
gi|296106328|ref|YP_003618028.1| hypothetical protein lpa_01144 [Legionella pneumophila 2300/99
Alcoy]
gi|397663308|ref|YP_006504846.1| hypothetical protein LPO_0821 [Legionella pneumophila subsp.
pneumophila]
gi|397666421|ref|YP_006507958.1| hypothetical protein LPV_0865 [Legionella pneumophila subsp.
pneumophila]
gi|53753556|emb|CAH15011.1| hypothetical protein lpl0777 [Legionella pneumophila str. Lens]
gi|295648229|gb|ADG24076.1| hypothetical protein lpa_01144 [Legionella pneumophila 2300/99
Alcoy]
gi|395126719|emb|CCD04902.1| conserved hypothetical protein, CBS domain [Legionella pneumophila
subsp. pneumophila]
gi|395129832|emb|CCD08065.1| conserved hypothetical protein, CBS domain [Legionella pneumophila
subsp. pneumophila]
Length = 144
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + + AL++ D++A L GI++++DI + L+LE VS V+ N T +LS +
Sbjct: 32 MVEKDIGALVVFDNDAHLIGIVSERDILRCYFHKNLSLETAKVSDVVYNNVT-ILSPHDS 90
Query: 61 VE-ALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
VE A+Q + + K RH+ + E GE++A+L I LY + R E
Sbjct: 91 VEKAMQVITETKRRHVLIQEEGELLAILSIGDLLYHVLEDKLRVIE 136
>gi|374327038|ref|YP_005085238.1| putative signal-transduction protein with CBS domains [Pyrobaculum
sp. 1860]
gi|356642307|gb|AET32986.1| putative signal-transduction protein with CBS domains [Pyrobaculum
sp. 1860]
Length = 123
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ++ ++++ D GI+T++DI V+AR L+ +TP +MT NP + D L
Sbjct: 21 MYENKIGSVVIVDDEGKPIGIVTERDIVY-VLARALS-PDTPAWMIMTENPIVIKEDALV 78
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALL 87
VEA++KM + RHLPVV++ G+++ ++
Sbjct: 79 VEAMEKMRELNIRHLPVVDHSGKLVGMV 106
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAV-VTVENKPRGILTSKDI---LMRVISQNLPADST 209
VVT D V KM E ++ S V V E KP GI+T +DI L R +S + PA
Sbjct: 5 VVTAKENDKVRDIAIKMYENKIGSVVIVDDEGKPIGIVTERDIVYVLARALSPDTPA--- 61
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
+MT NP D +V+A+ M + HLPVVD G +V +V
Sbjct: 62 --WMIMTENPIVIKEDALVVEAMEKMRELNIRHLPVVDHSGKLVGMV 106
>gi|346725849|ref|YP_004852518.1| hypothetical protein XACM_2967 [Xanthomonas axonopodis pv.
citrumelo F1]
gi|346650596|gb|AEO43220.1| CBS domain protein [Xanthomonas axonopodis pv. citrumelo F1]
Length = 142
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVL-SDTL 59
MA + + A+L+ + L+ GI++++D A +V+ R+ T V+++M+ V SDT+
Sbjct: 31 MAEKAIGAVLVMEGTRLV-GIVSERDYARKVVLRDRASSTTSVAEIMSAEVVTVTPSDTV 89
Query: 60 AVEALQKMVQGKFRHLPVVENGE---VIALLDIAKCLYDA 96
+Q M G+FRHLPVVENG VI++ D+ K + +A
Sbjct: 90 E-RCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEA 128
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 188 GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
GI++ +D +V+ ++ + +T V ++M+ T + + +M DG+F HLPVV+
Sbjct: 49 GIVSERDYARKVVLRDRASSTTSVAEIMSAEVVTVTPSDTVERCMQLMTDGRFRHLPVVE 108
Query: 248 RDGDVVDVVDVIHITHAAV-ATEILLDQIMR 277
+G V V+ + + A + A +DQ+ R
Sbjct: 109 -NGRVQGVISIGDLVKAVIEAQRQDIDQLQR 138
>gi|421505750|ref|ZP_15952685.1| signal-transduction protein [Pseudomonas mendocina DLHK]
gi|400343447|gb|EJO91822.1| signal-transduction protein [Pseudomonas mendocina DLHK]
Length = 146
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + V AL++ S L GI++++D +V +L++ ET +S +MTR+ V
Sbjct: 32 MAEKGVGALVVM-SGGRLVGIVSERDYVRKVALADLSVLETKISHIMTRDVISVGPRDSV 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
++ M + + RHLPV+ GE+I LL I + D IA
Sbjct: 91 QHCMELMTERRLRHLPVLAEGELIGLLSIGDLVKDTIA 128
>gi|410721948|ref|ZP_11361268.1| CBS-domain-containing membrane protein [Methanobacterium sp.
Maddingley MBC34]
gi|410597972|gb|EKQ52569.1| CBS-domain-containing membrane protein [Methanobacterium sp.
Maddingley MBC34]
Length = 272
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 111/250 (44%), Gaps = 52/250 (20%)
Query: 13 DSNALLCGILTDKDIATRVIAREL-NLEETP--VSKVMTRNPTFVLSDTLAVEALQKMVQ 69
D L GI+T+KDIA R+ + + NL + VS VMT P + +A Q M++
Sbjct: 43 DHQKELVGIITEKDIALRLGSSKYGNLAPSHFHVSTVMTHQPLTAEGNQTLGDAAQLMLE 102
Query: 70 GKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPN 129
L V++ ++I ++ L+ R P
Sbjct: 103 NGIGGLTVMDGNQIIGMITKTDFLHTCQGR----------------------------PF 134
Query: 130 TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGI 189
T I T+++RM ++ V T+ D ++ A + +++ +S V + + +G+
Sbjct: 135 TEI-TVKDRM-----------RTNVTTVGLQDRLVHARRLIIDEGISRLPVMEDGELQGM 182
Query: 190 LTSKDILMRVIS-------QNLPAD--STLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
+T+KDI + ++S + PA + LVE VM N + T +T I +A I+ D F
Sbjct: 183 ITAKDIALAMMSFRKVVPDKYKPARIRNLLVEDVMIQNVKTITPETTISEAAQILLDENF 242
Query: 241 LHLPVVDRDG 250
LPVVD DG
Sbjct: 243 SGLPVVDEDG 252
>gi|408532708|emb|CCK30882.1| CBS domain-containing protein [Streptomyces davawensis JCM 4913]
Length = 142
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 6 VDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQ 65
V AL + DSN LCGILTD+DI +A + + ++ P +V SD E LQ
Sbjct: 33 VGALPIGDSNDRLCGILTDRDIVVGCVAMGHDPAKVTAGEMAQGTPRWVASDADVGEVLQ 92
Query: 66 KMVQGKFRHLPVVENGEVIALL---DIAKCL 93
M + R LPV+EN ++ ++ D+A+ L
Sbjct: 93 VMQDHQIRRLPVIENKRLVGMISEADLAQHL 123
>gi|227828393|ref|YP_002830173.1| signal-transduction protein with CBS domains [Sulfolobus islandicus
M.14.25]
gi|229585622|ref|YP_002844124.1| signal-transduction protein with CBS domains [Sulfolobus islandicus
M.16.27]
gi|238620585|ref|YP_002915411.1| signal-transduction protein with CBS domains [Sulfolobus islandicus
M.16.4]
gi|385776718|ref|YP_005649286.1| putative signal-transduction protein with CBS domains [Sulfolobus
islandicus REY15A]
gi|227460189|gb|ACP38875.1| putative signal-transduction protein with CBS domains [Sulfolobus
islandicus M.14.25]
gi|228020672|gb|ACP56079.1| putative signal-transduction protein with CBS domains [Sulfolobus
islandicus M.16.27]
gi|238381655|gb|ACR42743.1| putative signal-transduction protein with CBS domains [Sulfolobus
islandicus M.16.4]
gi|323475466|gb|ADX86072.1| putative signal-transduction protein with CBS domains [Sulfolobus
islandicus REY15A]
Length = 129
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL 210
KS VVT+S + T+ M + + S +V KP GI+T +D++ R I + D
Sbjct: 11 KSNVVTVSKNTVLREVTRIMTDNNVGSVIVVDNGKPIGIITERDVV-RAIGKGRSLD-VK 68
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
E++MT + D+PI AL +M HLPV+D DG++ ++ + I A
Sbjct: 69 AEEIMTASLITIKEDSPITGALSLMRTYNIRHLPVIDHDGNLRGIISIRDIARA 122
>gi|377572710|ref|ZP_09801792.1| hypothetical protein MOPEL_001_00760 [Mobilicoccus pelagius NBRC
104925]
gi|377538639|dbj|GAB46957.1| hypothetical protein MOPEL_001_00760 [Mobilicoccus pelagius NBRC
104925]
Length = 621
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVV-TVENKPRGILTSKDILMRVISQNLPADST 209
++VTI P TV A M R+SS +V V + GILT +D+ RV++ LP ST
Sbjct: 159 SGRLVTIDPARTVQEAAAAMQAERVSSLLVLDVAGRLAGILTDRDLRNRVVAAALPY-ST 217
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG 250
V +VMTP+P ++ P +AL M HLPVVD G
Sbjct: 218 TVAEVMTPDPLTLGLEAPAFEALLEMLGRGVHHLPVVDGAG 258
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 5 RVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEAL 64
RV +LL+ D L GILTD+D+ RV+A L T V++VMT +P + + A EAL
Sbjct: 182 RVSSLLVLDVAGRLAGILTDRDLRNRVVAAALPYSTT-VAEVMTPDPLTLGLEAPAFEAL 240
Query: 65 QKMVQGKFRHLPVVEN 80
+M+ HLPVV+
Sbjct: 241 LEMLGRGVHHLPVVDG 256
>gi|320101686|ref|YP_004177277.1| KpsF/GutQ family protein [Isosphaera pallida ATCC 43644]
gi|319748968|gb|ADV60728.1| KpsF/GutQ family protein [Isosphaera pallida ATCC 43644]
Length = 381
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 2 AARRVDALLLTDSNALLCGILTDKDIATRVIARELN-LEETPVSKVMTRNPTFVLSDTLA 60
A+RR A+L+ D +L GI TD D+A R+ R+ + L E P+ + MTR P+ + +
Sbjct: 258 ASRRAGAILIVDDRGVLTGIFTDSDLA-RLFERQRDYLLERPIVEAMTRAPSLIRAGRSL 316
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCL 93
EAL + K LPV+ E G I L+D+ L
Sbjct: 317 AEALDALQARKLSELPVIDEAGRPIGLIDVTDLL 350
>gi|421502435|ref|ZP_15949389.1| hypothetical protein A471_04075 [Pseudomonas mendocina DLHK]
gi|400346867|gb|EJO95223.1| hypothetical protein A471_04075 [Pseudomonas mendocina DLHK]
Length = 639
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 15 NALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRH 74
N ++ GILTD+D+ TRV+A L TPVS+VMT NP + +D EA+ M++ H
Sbjct: 207 NQVMAGILTDRDLRTRVVAAGLP-SSTPVSQVMTPNPVTLQADDSVFEAMLCMLRNNIHH 265
Query: 75 LPVVENGE---VIALLDIAK 91
LP++ V+AL DI +
Sbjct: 266 LPILHRRRPVGVVALADIVR 285
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 188 GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
GILT +D+ RV++ LP+ ST V +VMTPNP D + +A+ M HLP++
Sbjct: 212 GILTDRDLRTRVVAAGLPS-STPVSQVMTPNPVTLQADDSVFEAMLCMLRNNIHHLPILH 270
Query: 248 R 248
R
Sbjct: 271 R 271
>gi|146309557|ref|YP_001190022.1| hypothetical protein Pmen_4543 [Pseudomonas mendocina ymp]
gi|145577758|gb|ABP87290.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Pseudomonas mendocina ymp]
Length = 639
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 15 NALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRH 74
N ++ GILTD+D+ TRV+A L TPVS+VMT NP + +D EA+ M++ H
Sbjct: 207 NQVMAGILTDRDLRTRVVAAGLP-SSTPVSQVMTPNPVTLQADDSVFEAMLCMLRNNIHH 265
Query: 75 LPVVENGE---VIALLDIAK 91
LP++ V+AL DI +
Sbjct: 266 LPILHRRRPVGVVALADIVR 285
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 188 GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
GILT +D+ RV++ LP+ ST V +VMTPNP D + +A+ M HLP++
Sbjct: 212 GILTDRDLRTRVVAAGLPS-STPVSQVMTPNPVTLQADDSVFEAMLCMLRNNIHHLPILH 270
Query: 248 R 248
R
Sbjct: 271 R 271
>gi|348030183|ref|YP_004872869.1| hypothetical protein GNIT_2779 [Glaciecola nitratireducens FR1064]
gi|347947526|gb|AEP30876.1| signaling protein with a cAMP-binding, CBS domains and predicted
nucleotidyltransferase domain [Glaciecola
nitratireducens FR1064]
Length = 610
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKV 214
+TIS TD++ A M E +SS ++ NK GI+T +D+ RV++ L V+++
Sbjct: 158 ITISQTDSIQSAGALMSEKHISSVLIIENNKLMGIITDRDLRNRVVAVGLNM-QLPVKQI 216
Query: 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
MT NP T + + DA+ IM++ HLPV+D
Sbjct: 217 MTENPAYLTKNKTLFDAVCIMNEKSINHLPVLD 249
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ + + ++L+ ++N L+ GI+TD+D+ RV+A LN++ PV ++MT NP ++ +
Sbjct: 173 MSEKHISSVLIIENNKLM-GIITDRDLRNRVVAVGLNMQ-LPVKQIMTENPAYLTKNKTL 230
Query: 61 VEALQKMVQGKFRHLPVVE 79
+A+ M + HLPV++
Sbjct: 231 FDAVCIMNEKSINHLPVLD 249
>gi|254468074|ref|ZP_05081480.1| inosine-5'-monophosphate dehydrogenase [beta proteobacterium KB13]
gi|207086884|gb|EDZ64167.1| inosine-5'-monophosphate dehydrogenase [beta proteobacterium KB13]
Length = 143
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA ++ ALL+ N LL GI++++D A ++ + + +E + +VMT+N + ++
Sbjct: 32 MAEYKIGALLVMQKNKLL-GIISERDYAREIVLKGKSSKECLIEEVMTKNVITIDANDTY 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL---DIAK 91
+ L+ M + RHLPV+EN +V+ +L D+AK
Sbjct: 91 DKGLEIMTENHIRHLPVIENNKVVGMLSLGDLAK 124
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 48/96 (50%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
++++ P V+ A M E ++ + +V +NK GI++ +D ++ + + L+E+
Sbjct: 16 ILSVEPDRPVIDALIIMAEYKIGALLVMQKNKLLGIISERDYAREIVLKGKSSKECLIEE 75
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
VMT N + L IM + HLPV++ +
Sbjct: 76 VMTKNVITIDANDTYDKGLEIMTENHIRHLPVIENN 111
>gi|448389007|ref|ZP_21565502.1| signal transduction protein with CBS domains [Haloterrigena salina
JCM 13891]
gi|445669294|gb|ELZ21906.1| signal transduction protein with CBS domains [Haloterrigena salina
JCM 13891]
Length = 144
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Query: 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVIS 201
P + +I+ + +VV+ SP ++ + M E + S V+ E +P+GI+T +DI + +S
Sbjct: 2 PEIKSIV--REQVVSASPDASLTELAELMDEKDVGSVVIVEEEQPQGIVTDRDITIEAVS 59
Query: 202 QNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
+ S VM+ + ID+ I D L M DG +P D DG++ +V
Sbjct: 60 RGEDPTSVTAADVMSEDLVTVDIDSGIFDVLRTMEDGNVRRVPATDTDGNLAGIV 114
>gi|146309135|ref|YP_001189600.1| signal-transduction protein [Pseudomonas mendocina ymp]
gi|145577336|gb|ABP86868.1| putative signal-transduction protein with CBS domains [Pseudomonas
mendocina ymp]
Length = 146
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + V AL++ S L GI++++D +V +L++ ET +S +MTR+ V
Sbjct: 32 MAEKGVGALVVM-SGGRLVGIVSERDYVRKVALADLSVLETKISHIMTRDVISVGPRDSV 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
++ M + + RHLPV+ GE+I LL I + D IA
Sbjct: 91 QHCMELMTERRLRHLPVLAEGELIGLLSIGDLVKDTIA 128
>gi|113866093|ref|YP_724582.1| inosine-5'-monophosphate dehydrogenase [Ralstonia eutropha H16]
gi|113524869|emb|CAJ91214.1| Inosine-5'-monophosphate dehydrogenase [Ralstonia eutropha H16]
Length = 146
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+ + +L GIL+++D A +VI + ET V +MT +V +
Sbjct: 32 MAEKGIGALLVIEHGEIL-GILSERDYARKVILMQRTSRETLVRDIMTNAVIYVGASQTT 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEK 106
E + M + + RHLPV+E E+I +L I + D I+ + E+
Sbjct: 91 DECMALMTRHRLRHLPVMEGDELIGMLSIGDLVKDIISEQQFIIEQ 136
>gi|327310796|ref|YP_004337693.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
gi|326947275|gb|AEA12381.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
Length = 136
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVE-NKPRGILTSKDILMRVISQNLPADSTLV 211
+VVT V M E ++ S VV E +P GI+T +D L+ V ++ L AD T +
Sbjct: 17 EVVTAGKNTPVKEVANSMYEKKIGSVVVVDEAGRPVGIVTERD-LVYVCAKGLSAD-TPI 74
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
VMT NP D P++DA+ M + HLPVVD++G +V ++ V
Sbjct: 75 WMVMTENPVTIAEDAPLLDAVEKMRELNVRHLPVVDKEGKLVGILSV 121
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +++ ++++ D GI+T++D+ V A+ L+ +TP+ VMT NP + D
Sbjct: 34 MYEKKIGSVVVVDEAGRPVGIVTERDLVY-VCAKGLS-ADTPIWMVMTENPVTIAEDAPL 91
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCL 93
++A++KM + RHLPVV+ G+++ +L + L
Sbjct: 92 LDAVEKMRELNVRHLPVVDKEGKLVGILSVRDVL 125
>gi|404318969|ref|ZP_10966902.1| hypothetical protein OantC_12287 [Ochrobactrum anthropi CTS-325]
Length = 143
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 55/101 (54%)
Query: 5 RVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEAL 64
++ AL++ D + GIL+++D+ V A+E PV++VMT + +
Sbjct: 34 KIGALVVCDEAGRIKGILSERDVVRAVAAQETKAMSMPVTEVMTAKVQVCREHHTINQVM 93
Query: 65 QKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
+ M + +FRH+PV E+G+++ ++ I + I +ER AE
Sbjct: 94 EIMTRSRFRHMPVEEHGKLVGIISIGDVVKRRIEDVEREAE 134
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 143 SLSTIIPEKSK-VVTISPTDTVLMATKKMLELRLSSAVVTVE-NKPRGILTSKDILMRVI 200
++ +I+ K + VV I+P DT+ A + + ++ + VV E + +GIL+ +D++ V
Sbjct: 2 TVRSILETKGRDVVVIAPADTLSHAVAMLNKYKIGALVVCDEAGRIKGILSERDVVRAVA 61
Query: 201 SQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+Q A S V +VMT + I + IM +F H+P V+ G +V ++ +
Sbjct: 62 AQETKAMSMPVTEVMTAKVQVCREHHTINQVMEIMTRSRFRHMP-VEEHGKLVGIISI 118
>gi|338213210|ref|YP_004657265.1| signal transduction protein with CBS domains [Runella slithyformis
DSM 19594]
gi|336307031|gb|AEI50133.1| putative signal transduction protein with CBS domains [Runella
slithyformis DSM 19594]
Length = 146
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL 210
++ + +++P TVL A K+M + + + +V E K GI + +D + I Q ++ TL
Sbjct: 12 RNAIFSVTPETTVLDALKQMADKNIGAVLVLEEGKLAGIFSERDYARKGILQGRASNQTL 71
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+++VMT T + + +A+ IM + HLPVVD +G+++ ++ +
Sbjct: 72 IKEVMTAKLITVTSEQKLEEAMVIMSEKHIRHLPVVD-EGELIGIISI 118
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + A+L+ + L GI +++D A + I + +T + +VMT V S+
Sbjct: 31 MADKNIGAVLVLEEGKL-AGIFSERDYARKGILQGRASNQTLIKEVMTAKLITVTSEQKL 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDI----AKCLYDAIARME 101
EA+ M + RHLPVV+ GE+I ++ I A + D AR+E
Sbjct: 90 EEAMVIMSEKHIRHLPVVDEGELIGIISINDVVASIIKDQKARIE 134
>gi|90424619|ref|YP_532989.1| signal-transduction protein [Rhodopseudomonas palustris BisB18]
gi|90106633|gb|ABD88670.1| putative signal-transduction protein with CBS domains
[Rhodopseudomonas palustris BisB18]
Length = 142
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVL-SDTL 59
+A RR+ A+L+ + + GIL+++D+ + R + E PVS VMTR SDT+
Sbjct: 30 LADRRIGAVLVL-TRKRIEGILSERDVVRVLGERGAAVLEEPVSAVMTRKVIHCRPSDTV 88
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIA 90
A ++ M GKFRH+PV+E+ E++ L+ I
Sbjct: 89 A-SMMELMTSGKFRHIPVIEDAEIVGLISIG 118
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 62/123 (50%), Gaps = 14/123 (11%)
Query: 143 SLSTIIPEKSK-VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVIS 201
++ I+ K + +V + P + A K + + R+ + +V + GIL+ +D++ RV+
Sbjct: 2 TVGAILQSKGRQIVGVEPETPLFAAIKVLADRRIGAVLVLTRKRIEGILSERDVV-RVLG 60
Query: 202 QNL------PADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDV 255
+ P + + KV+ C DT + + +M GKF H+PV++ D ++V +
Sbjct: 61 ERGAAVLEEPVSAVMTRKVI----HCRPSDT-VASMMELMTSGKFRHIPVIE-DAEIVGL 114
Query: 256 VDV 258
+ +
Sbjct: 115 ISI 117
>gi|389793525|ref|ZP_10196688.1| signal transduction protein [Rhodanobacter fulvus Jip2]
gi|388433739|gb|EIL90699.1| signal transduction protein [Rhodanobacter fulvus Jip2]
Length = 142
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
+K+ +I P VL A K+M E R+ + +V + G+++ +D +V+ Q + T V
Sbjct: 13 NKIFSIEPDVPVLEAIKRMAEYRIGALMVMRGSALVGVMSERDYARKVLLQGRSSSQTAV 72
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
+M+ P + DT + D + + D + HLPVVD + VV V+ + + A +
Sbjct: 73 SDIMSGTPITVSPDTDVFDCMRLCTDSRIRHLPVVDGE-QVVGVISIGDLVKAVI 126
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA R+ AL++ +AL+ G+++++D A +V+ + + +T VS +M+ P V DT
Sbjct: 31 MAEYRIGALMVMRGSALV-GVMSERDYARKVLLQGRSSSQTAVSDIMSGTPITVSPDTDV 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL---DIAKCLYDAIA 98
+ ++ + RHLPVV+ +V+ ++ D+ K + DA A
Sbjct: 90 FDCMRLCTDSRIRHLPVVDGEQVVGVISIGDLVKAVIDAQA 130
>gi|377813056|ref|YP_005042305.1| putative signal-transduction protein with CBS domains [Burkholderia
sp. YI23]
gi|357937860|gb|AET91418.1| putative signal-transduction protein with CBS domains [Burkholderia
sp. YI23]
Length = 146
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + A+++T+ + ++ GI+T++D A +V+ + ++TPV +MT +V D
Sbjct: 32 MADKHIGAVIVTEGDEIV-GIMTERDYARKVVLMDRASKQTPVRDIMTSQVRYVRPDQTT 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
+ + M + RHLPV+++G+++ ++ I + + I+ +
Sbjct: 91 DDCMALMTDKRMRHLPVIDDGKLVGMISIGDLVKNIISEQQ 131
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 149 PEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADS 208
P+++ V T++ T +V A K M + + + +VT ++ GI+T +D +V+ + +
Sbjct: 12 PDQT-VYTVAATASVFDAIKLMADKHIGAVIVTEGDEIVGIMTERDYARKVVLMDRASKQ 70
Query: 209 TLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
T V +MT D D + +M D + HLPV+D DG +V ++ +
Sbjct: 71 TPVRDIMTSQVRYVRPDQTTDDCMALMTDKRMRHLPVID-DGKLVGMISI 119
>gi|227831149|ref|YP_002832929.1| hypothetical protein LS215_2299 [Sulfolobus islandicus L.S.2.15]
gi|229580034|ref|YP_002838434.1| signal-transduction protein with CBS domains [Sulfolobus islandicus
Y.G.57.14]
gi|229581305|ref|YP_002839704.1| putative signal-transduction protein with CBS domains [Sulfolobus
islandicus Y.N.15.51]
gi|284998647|ref|YP_003420415.1| hypothetical protein [Sulfolobus islandicus L.D.8.5]
gi|227457597|gb|ACP36284.1| CBS domain containing protein [Sulfolobus islandicus L.S.2.15]
gi|228010750|gb|ACP46512.1| putative signal-transduction protein with CBS domains [Sulfolobus
islandicus Y.G.57.14]
gi|228012021|gb|ACP47782.1| putative signal-transduction protein with CBS domains [Sulfolobus
islandicus Y.N.15.51]
gi|284446543|gb|ADB88045.1| CBS domain containing protein [Sulfolobus islandicus L.D.8.5]
Length = 129
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL 210
KS VVT+S + T+ M + + S +V KP GI+T +D++ R I + D
Sbjct: 11 KSNVVTVSKNTVLREVTRIMTDNNVGSVIVVDNGKPIGIITERDVV-RAIGKGKSLD-VK 68
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
E++MT + D+PI AL +M HLPV+D DG++ ++ + I A
Sbjct: 69 AEEIMTASLITIKEDSPITGALSLMRTYNIRHLPVIDHDGNLRGIISIRDIARA 122
>gi|365845115|ref|ZP_09385911.1| CBS domain protein [Flavonifractor plautii ATCC 29863]
gi|364561834|gb|EHM39711.1| CBS domain protein [Flavonifractor plautii ATCC 29863]
Length = 145
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 6 VDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQ 65
V +L + + L GI+TD+DI R +A E + +T V +MTRN V D A EA +
Sbjct: 32 VGSLPVCGEDGGLRGIVTDRDIILRCVAAEEDPLKTQVKDIMTRNCAVVSPDDDAREATR 91
Query: 66 KMVQGKFRHLPVVENGEVIALL---DIAKC 92
M + R LPV+E G+V+ ++ D+A+C
Sbjct: 92 LMAAKQVRRLPVLEGGKVVGMVSLGDLAQC 121
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVISQNLPADSTLVE 212
VV+I+P ++ +A + + + S V E+ RGI+T +DI++R ++ T V+
Sbjct: 11 VVSITPGESASLAARLLSRHNVGSLPVCGEDGGLRGIVTDRDIILRCVAAEEDPLKTQVK 70
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
+MT N + D +A +M + LPV++ G VV +V
Sbjct: 71 DIMTRNCAVVSPDDDAREATRLMAAKQVRRLPVLE-GGKVVGMV 113
>gi|182678555|ref|YP_001832701.1| signal-transduction protein [Beijerinckia indica subsp. indica ATCC
9039]
gi|182634438|gb|ACB95212.1| putative signal-transduction protein with CBS domains [Beijerinckia
indica subsp. indica ATCC 9039]
Length = 143
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 54/98 (55%)
Query: 5 RVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEAL 64
++ A+++TD++ L GI++++DI + R E VS MT + V D E +
Sbjct: 34 KIGAVVVTDAHGHLLGIISERDIVMALGQRGPIALEDAVSTHMTSHVVTVSEDETVHETV 93
Query: 65 QKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMER 102
KM +G+FRHLPV+ NG + L+ I + + ME+
Sbjct: 94 SKMNRGRFRHLPVLLNGRLCGLVSIGDVVKYRLEEMEK 131
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 63/121 (52%), Gaps = 4/121 (3%)
Query: 143 SLSTIIPEKSK-VVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILMRVI 200
+++ I+ K + V+ + P T+L T+ +++ ++ + VVT GI++ +DI+M +
Sbjct: 2 TVARILATKGRGVIGVQPHRTLLEVTEILMKNKIGAVVVTDAHGHLLGIISERDIVMALG 61
Query: 201 SQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVV--DRDGDVVDVVDV 258
+ A V MT + + D + + + M+ G+F HLPV+ R +V + DV
Sbjct: 62 QRGPIALEDAVSTHMTSHVVTVSEDETVHETVSKMNRGRFRHLPVLLNGRLCGLVSIGDV 121
Query: 259 I 259
+
Sbjct: 122 V 122
>gi|269960763|ref|ZP_06175134.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269834427|gb|EEZ88515.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 620
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 15 NALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRH 74
N + G++TD+D+ RVIA+ ++ + P+S+VMT +P + D L + A M+Q R+
Sbjct: 195 NDKIVGLITDRDMTKRVIAQGVSTDR-PISEVMTHDPQTIKPDDLVLHAASMMMQHNIRN 253
Query: 75 LPVVENGEVIALL 87
LP+VEN +V+ +L
Sbjct: 254 LPLVENNKVVGVL 266
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
+V ++ ++ +ML AVV +K G++T +D+ RVI+Q + D +
Sbjct: 164 GRVAVVTADQSIQTVANEMLTKCSPCAVVYENDKIVGLITDRDMTKRVIAQGVSTDRPIS 223
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEIL 271
E VMT +P+ D ++ A +M +LP+V+ + VV V+ H+ I
Sbjct: 224 E-VMTHDPQTIKPDDLVLHAASMMMQHNIRNLPLVE-NNKVVGVLTTTHLVQNHRVQAIF 281
Query: 272 L 272
L
Sbjct: 282 L 282
>gi|78048738|ref|YP_364913.1| hypothetical protein XCV3182 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78037168|emb|CAJ24913.1| conserved hypothetical protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 142
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVL-SDTL 59
MA + + A+L+ + L+ GI++++D A +V+ R+ T V+++M+ V SDT+
Sbjct: 31 MAEKAIGAVLVMEGTRLV-GIVSERDYARKVVLRDRASSTTSVAEIMSAEVVTVSPSDTV 89
Query: 60 AVEALQKMVQGKFRHLPVVENGE---VIALLDIAKCLYDA 96
+Q M G+FRHLPVVENG VI++ D+ K + +A
Sbjct: 90 E-RCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEA 128
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 188 GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
GI++ +D +V+ ++ + +T V ++M+ + + + +M DG+F HLPVV+
Sbjct: 49 GIVSERDYARKVVLRDRASSTTSVAEIMSAEVVTVSPSDTVERCMQLMTDGRFRHLPVVE 108
Query: 248 RDGDVVDVVDVIHITHAAV-ATEILLDQIMR 277
+G V V+ + + A + A +DQ+ R
Sbjct: 109 -NGRVQGVISIGDLVKAVIEAQRQDIDQLQR 138
>gi|239813716|ref|YP_002942626.1| CBS domain containing protein [Variovorax paradoxus S110]
gi|239800293|gb|ACS17360.1| CBS domain containing protein [Variovorax paradoxus S110]
Length = 144
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%)
Query: 15 NALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRH 74
+ L G++TD+DIA R +ARE++L +PV ++MT + + +D EAL +M + R
Sbjct: 41 GSRLVGVVTDRDIAVRGVAREIDLGASPVKQIMTADAYWCYADDTVDEALSQMSAVQIRR 100
Query: 75 LPVVEN 80
LPVV+
Sbjct: 101 LPVVDR 106
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 58/103 (56%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
V T++P DT++ A K + EL + V ++ G++T +DI +R +++ + ++ V++
Sbjct: 12 VRTVAPGDTIVQAAKALEELEVGVLPVCDGSRLVGVVTDRDIAVRGVAREIDLGASPVKQ 71
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
+MT + D + +AL M + LPVVDRD +V ++
Sbjct: 72 IMTADAYWCYADDTVDEALSQMSAVQIRRLPVVDRDKRLVGIL 114
>gi|1002715|gb|AAA92086.1| similar to the inosine monophosphate dehydrogenase from Pyrococcus
furiosus (SwissProt Accession Number P42851); orfX
protein; Method: conceptual translation supplied by
author, partial [Methanopyrus kandleri]
Length = 172
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVE-NKPRGILTSKDILMRVISQNLPADST 209
+ V+T SPT+T + KM E + S V+ E ++P GI+T +D++++V+SQ D
Sbjct: 11 RRDVITGSPTETAVEIAYKMREHGIGSVVIVNEKDEPIGIITERDLVIKVVSQGKNPDEV 70
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV---DVIHITHAAV 266
+ +M+ D + +A+ +M D LP+VD +G ++ +V D++ + V
Sbjct: 71 IARDIMSQPVITVEEDMEVNEAVKLMVDKGIRRLPIVDDNGKLIGIVTMQDILQVEPYLV 130
Query: 267 AT 268
AT
Sbjct: 131 AT 132
>gi|406924104|gb|EKD60999.1| CBS protein [uncultured bacterium]
Length = 144
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
++ARR+ A++++ L GI++++DI V R V +MT
Sbjct: 31 LSARRIGAVVISPDGKQLGGIVSERDIVREVGRRGSTCLTDTVESIMTAKVVTCTRADNT 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116
+ LQKM G+FRH+PV+E GE+I L+ I + AR+ + + A+ ++G
Sbjct: 91 NDILQKMTDGRFRHVPVLEGGELIGLISIGDVVK---ARLSELSMEKDALEGMIKG 143
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 144 LSTIIPEKS--KVVTISPTDTVLMATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVI 200
+S I+ KS VVT+ P V + + R+ + V++ + K GI++ +DI+ V
Sbjct: 3 VSQILKLKSDDGVVTLPPGTAVARVAEVLSARRIGAVVISPDGKQLGGIVSERDIVREVG 62
Query: 201 SQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIH 260
+ + VE +MT T D L M DG+F H+PV++ G+++ ++ +
Sbjct: 63 RRGSTCLTDTVESIMTAKVVTCTRADNTNDILQKMTDGRFRHVPVLE-GGELIGLISIGD 121
Query: 261 ITHA 264
+ A
Sbjct: 122 VVKA 125
>gi|394986438|pdb|4FRY|A Chain A, The Structure Of A Putative Signal-Transduction Protein
With Cbs Domains From Burkholderia Ambifaria Mc40-6
gi|394986439|pdb|4FRY|B Chain B, The Structure Of A Putative Signal-Transduction Protein
With Cbs Domains From Burkholderia Ambifaria Mc40-6
Length = 157
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+ D + + GI+T++D A +V+ +E + + T V ++MT +V
Sbjct: 39 MAEKGIGALLVVDGDDI-AGIVTERDYARKVVLQERSSKATRVEEIMTAKVRYVEPSQST 97
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
E + M + + RHLPV++ G++I L+ I + IA
Sbjct: 98 DECMALMTEHRMRHLPVLDGGKLIGLISIGDLVKSVIA 135
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+ T++ D V A K M E + + +V + GI+T +D +V+ Q + +T VE+
Sbjct: 23 IYTVTKNDFVYDAIKLMAEKGIGALLVVDGDDIAGIVTERDYARKVVLQERSSKATRVEE 82
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
+MT + + +M + + HLPV+D G ++ ++ + + + +A +
Sbjct: 83 IMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIADQ 137
>gi|385774073|ref|YP_005646640.1| putative signal-transduction protein with CBS domains [Sulfolobus
islandicus HVE10/4]
gi|323478188|gb|ADX83426.1| putative signal-transduction protein with CBS domains [Sulfolobus
islandicus HVE10/4]
Length = 129
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL 210
KS VVT+S + T+ M + + S +V KP GI+T +D++ R I + D
Sbjct: 11 KSNVVTVSRNTVLREVTRIMTDNNVGSVIVVDNGKPIGIITERDVV-RAIGKGRSLD-VK 68
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
E++MT + D+PI AL +M HLPV+D DG++ ++ + I A
Sbjct: 69 AEEIMTASLITIKEDSPITGALSLMRTYNIRHLPVIDHDGNLRGIISIRDIARA 122
>gi|373116607|ref|ZP_09530759.1| hypothetical protein HMPREF0995_01595 [Lachnospiraceae bacterium
7_1_58FAA]
gi|371669174|gb|EHO34277.1| hypothetical protein HMPREF0995_01595 [Lachnospiraceae bacterium
7_1_58FAA]
Length = 145
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 6 VDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQ 65
V +L + + L GI+TD+DI R +A E + +T V +MTRN V D A EA +
Sbjct: 32 VGSLPVCGEDGGLRGIVTDRDIILRCVAAEEDPLKTQVKDIMTRNCAVVSPDDDAREATR 91
Query: 66 KMVQGKFRHLPVVENGEVIALL---DIAKC 92
M + R LPV+E G+V+ ++ D+A+C
Sbjct: 92 IMAAKQVRRLPVLEGGKVVGMVSLGDLAQC 121
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVISQNLPADSTLVE 212
VV+I+P+++ +A + + + S V E+ RGI+T +DI++R ++ T V+
Sbjct: 11 VVSITPSESASLAARLLSRHNVGSLPVCGEDGGLRGIVTDRDIILRCVAAEEDPLKTQVK 70
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
+MT N + D +A IM + LPV++ G VV +V
Sbjct: 71 DIMTRNCAVVSPDDDAREATRIMAAKQVRRLPVLE-GGKVVGMV 113
>gi|254282962|ref|ZP_04957930.1| cyclic nucleotide-binding protein [gamma proteobacterium NOR51-B]
gi|219679165|gb|EED35514.1| cyclic nucleotide-binding protein [gamma proteobacterium NOR51-B]
Length = 624
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
++TI+P TV A M R+SS V + K RGILT +D+ +RV++ + + S V +
Sbjct: 168 LLTIAPEATVQAAAAAMAARRVSSTFVVDQGKLRGILTDRDLRVRVLAAGV-SPSVAVSE 226
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILLD 273
VMTP P I A +M HLPV RDG++ VV + A + L
Sbjct: 227 VMTPQPRSIDAGQSIFAATLMMTQSGIHHLPVT-RDGELAGVVTTSDLIVARQDDPVYLV 285
Query: 274 Q-IMRQQ 279
Q I RQQ
Sbjct: 286 QRISRQQ 292
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 4 RRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEA 63
RRV + + D L GILTD+D+ RV+A ++ VS+VMT P + + A
Sbjct: 187 RRVSSTFVVDQGKLR-GILTDRDLRVRVLAAGVS-PSVAVSEVMTPQPRSIDAGQSIFAA 244
Query: 64 LQKMVQGKFRHLPVVENGEVIALL 87
M Q HLPV +GE+ ++
Sbjct: 245 TLMMTQSGIHHLPVTRDGELAGVV 268
>gi|127513297|ref|YP_001094494.1| cyclic nucleotide-binding protein [Shewanella loihica PV-4]
gi|126638592|gb|ABO24235.1| cyclic nucleotide-binding protein [Shewanella loihica PV-4]
Length = 615
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RV ++L+ D N L GILTD+D+ RV+A L+ PV + MT PT + ++ L
Sbjct: 176 MRDNRVSSVLIID-NQKLAGILTDRDLRNRVLAESLD-GSLPVHQAMTVTPTTLSANALV 233
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
EA+ M Q HLP+++ G I ++
Sbjct: 234 FEAMLLMSQHNIHHLPIMDEGHPIGVI 260
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 166 ATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL-VEKVMTPNPECATI 224
A + M + R+SS ++ K GILT +D+ RV++++L D +L V + MT P +
Sbjct: 172 AARLMRDNRVSSVLIIDNQKLAGILTDRDLRNRVLAESL--DGSLPVHQAMTVTPTTLSA 229
Query: 225 DTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILL-DQIMRQQ 279
+ + +A+ +M HLP++D +G + V+ I + +LL +I RQ
Sbjct: 230 NALVFEAMLLMSQHNIHHLPIMD-EGHPIGVITSTDILRGQSSQPLLLIGEIERQH 284
>gi|384428861|ref|YP_005638221.1| hypothetical protein XCR_3239 [Xanthomonas campestris pv. raphani
756C]
gi|341937964|gb|AEL08103.1| CBS domain protein [Xanthomonas campestris pv. raphani 756C]
Length = 128
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 64/103 (62%), Gaps = 6/103 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + A+L+ + L+ GI++++D A +V+ R+ + T V+++M+ + +S +
Sbjct: 17 MADKSIGAVLVMEGERLV-GIVSERDYARKVVLRDRSSSSTSVAEIMS-HAVVTVSPADS 74
Query: 61 VE-ALQKMVQGKFRHLPVVENGE---VIALLDIAKCLYDAIAR 99
VE +Q M G+FRHLPVV+NG VI++ D+ K + +A R
Sbjct: 75 VEHCMQLMTDGRFRHLPVVDNGRVQGVISIGDLVKAVIEAQQR 117
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
Query: 156 TISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVM 215
+++ V+ A + M + + + +V + GI++ +D +V+ ++ + ST V ++M
Sbjct: 3 SVAADAAVIEAIRLMADKSIGAVLVMEGERLVGIVSERDYARKVVLRDRSSSSTSVAEIM 62
Query: 216 TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV-ATEILLDQ 274
+ + + + +M DG+F HLPVVD +G V V+ + + A + A + +DQ
Sbjct: 63 SHAVVTVSPADSVEHCMQLMTDGRFRHLPVVD-NGRVQGVISIGDLVKAVIEAQQRDIDQ 121
Query: 275 IMR 277
+ R
Sbjct: 122 LQR 124
>gi|410863095|ref|YP_006978329.1| Signaling protein [Alteromonas macleodii AltDE1]
gi|410820357|gb|AFV86974.1| Signaling protein [Alteromonas macleodii AltDE1]
Length = 613
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ++V +LL+T +N L GI+TD+D+ +RV+A L+ PVS++MT++P + +
Sbjct: 172 MTTQKVSSLLVTQNNKL-TGIVTDRDLRSRVVAASLD-THLPVSEIMTQSPAQITGNRTL 229
Query: 61 VEALQKMVQGKFRHLPVVENGEVIAL 86
+AL M + HLPV+++ ++ L
Sbjct: 230 FDALALMTEKNIHHLPVIDHQSLVPL 255
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL-VEK 213
V+++ ++ A + M ++SS +VT NK GI+T +D+ RV++ +L D+ L V +
Sbjct: 157 VSVNADTSISAAAQLMTTQKVSSLLVTQNNKLTGIVTDRDLRSRVVAASL--DTHLPVSE 214
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
+MT +P T + + DAL +M + HLPV+D
Sbjct: 215 IMTQSPAQITGNRTLFDALALMTEKNIHHLPVID 248
>gi|290961286|ref|YP_003492468.1| hypothetical protein SCAB_69351 [Streptomyces scabiei 87.22]
gi|260650812|emb|CBG73929.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 157
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 6 VDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQ 65
V AL ++D N LCGILTD+DI +A + ++ P ++ +D E L+
Sbjct: 48 VGALPISDQNERLCGILTDRDIVVGCVALGHDPSTITAGEMAKGTPRWIAADADVAEVLE 107
Query: 66 KMVQGKFRHLPVVENGEVIALL---DIAKCLYD 95
+M + R LPV+EN ++ ++ D+A+ L D
Sbjct: 108 EMKGHQIRRLPVIENKRLVGMISEADLARHLSD 140
>gi|54296767|ref|YP_123136.1| hypothetical protein lpp0806 [Legionella pneumophila str. Paris]
gi|53750552|emb|CAH11954.1| hypothetical protein lpp0806 [Legionella pneumophila str. Paris]
Length = 144
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + + AL++ D++A L GI++++DI + L+LE VS V+ N T +LS +
Sbjct: 32 MVEKDIGALVVFDNDAHLIGIVSERDILRCYFHKSLSLETAKVSDVVYTNVT-ILSPHDS 90
Query: 61 VE-ALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
VE A+Q + + K RH+ + E GE++A+L I LY + R E
Sbjct: 91 VEKAMQVITETKRRHVLIQEEGELLAILSIGDLLYHVLEDKLRVIE 136
>gi|319783238|ref|YP_004142714.1| hypothetical protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169126|gb|ADV12664.1| CBS domain containing protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 143
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLE-ETPVSKVMTRNPTFVLSDTL 59
+A ++ AL++T+ + + GIL+++DI RV+ARE + PV MT +
Sbjct: 30 LAEHKIGALVITNGDRKIVGILSERDI-VRVVAREGGAALDIPVRSAMTPKVKICNENHT 88
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAA 112
E ++ M +G+FRHLPV ++G + ++ I + I +ER A++ +A A
Sbjct: 89 VNEVMEIMTRGRFRHLPVEKDGMLDGIVSIGDVVKRRIEDVEREADEIRAYIA 141
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILMRVISQNLPADSTLVE 212
V+T+ P + + A + + E ++ + V+T + K GIL+ +DI+ V + A V
Sbjct: 14 VLTLGPNEKLSEAIRILAEHKIGALVITNGDRKIVGILSERDIVRVVAREGGAALDIPVR 73
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG---DVVDVVDVI 259
MTP + + + + + IM G+F HLP V++DG +V + DV+
Sbjct: 74 SAMTPKVKICNENHTVNEVMEIMTRGRFRHLP-VEKDGMLDGIVSIGDVV 122
>gi|158430766|pdb|2RC3|A Chain A, Crystal Structure Of Cbs Domain, Ne2398
gi|158430767|pdb|2RC3|B Chain B, Crystal Structure Of Cbs Domain, Ne2398
gi|158430768|pdb|2RC3|C Chain C, Crystal Structure Of Cbs Domain, Ne2398
gi|158430769|pdb|2RC3|D Chain D, Crystal Structure Of Cbs Domain, Ne2398
Length = 135
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA + ALL+ L+ GILT++D + + + +++T V ++MTR +V +
Sbjct: 35 MAADNIGALLVMKDEKLV-GILTERDFSRKSYLLDKPVKDTQVKEIMTRQVAYVDLNNTN 93
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
+ + + + + RHLPV+++G+VI LL I + DAI++ +
Sbjct: 94 EDCMALITEMRVRHLPVLDDGKVIGLLSIGDLVKDAISQHQ 134
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 66/132 (50%), Gaps = 5/132 (3%)
Query: 140 FRPSLSTI---IPEKSK-VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDI 195
F+ + T+ + EK VV I P D+V A +KM + + +V + K GILT +D
Sbjct: 1 FQGHMKTVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMKDEKLVGILTERDF 60
Query: 196 LMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDV 255
+ + P T V+++MT ++ D + ++ + + HLPV+D DG V+ +
Sbjct: 61 SRKSYLLDKPVKDTQVKEIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGL 119
Query: 256 VDVIHITHAAVA 267
+ + + A++
Sbjct: 120 LSIGDLVKDAIS 131
>gi|378776683|ref|YP_005185120.1| hypothetical protein lp12_0750 [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|364507497|gb|AEW51021.1| hypothetical protein lp12_0750 [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 164
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + + AL++ D++A L GI++++DI + L+LE VS V+ N T +LS +
Sbjct: 52 MVEKDIGALVVFDNDAHLIGIVSERDILRCYFHKNLSLETAKVSDVVYNNVT-ILSPHDS 110
Query: 61 VE-ALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
VE A+Q + + K RH+ + E GE++A+L I LY + R E
Sbjct: 111 VEKAMQVITETKRRHVLIQEEGELLAILSIGDLLYHVLEDKLRVIE 156
>gi|325265999|ref|ZP_08132685.1| arabinose 5-phosphate isomerase [Kingella denitrificans ATCC 33394]
gi|324982637|gb|EGC18263.1| arabinose 5-phosphate isomerase [Kingella denitrificans ATCC 33394]
Length = 322
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ + + + + D L G+ TD D+ R+ R L + P+S+VMTR+P + + L
Sbjct: 226 MSGKGLGMVAVADGAGCLAGVFTDGDL-RRLFERHEQLPDLPMSEVMTRHPATISPEKLL 284
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYD 95
EAL+ M + + LPV E G ++ L+ +YD
Sbjct: 285 SEALKLMQEKRINGLPVCEGGRLVGALN----MYD 315
>gi|367473851|ref|ZP_09473395.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
gi|365273901|emb|CCD85863.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
Length = 142
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVL-SDTL 59
+A R++ A+L+ S + GIL+++DI + R ++ PVS VMTR +DT+
Sbjct: 30 LADRKIGAVLVM-SGTRMEGILSERDIVRALGERGASVLTEPVSDVMTRRVVSCKPADTV 88
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIA 90
A ++ M GKFRHLPV+E G V+ L+ I
Sbjct: 89 A-SLMETMTNGKFRHLPVIEGGLVVGLISIG 118
>gi|344339030|ref|ZP_08769960.1| multi-sensor hybrid histidine kinase [Thiocapsa marina 5811]
gi|343800950|gb|EGV18894.1| multi-sensor hybrid histidine kinase [Thiocapsa marina 5811]
Length = 1641
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 115/279 (41%), Gaps = 45/279 (16%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA R+ +L+ + L GILT++D+ R++ E++L+ PV++VM+ + +T
Sbjct: 33 MARERLSCILVLEDGRPL-GILTERDL-LRLLDEEVDLDR-PVAEVMSTPVLAIPGETEF 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
A + + RHL V+ GKAI A E
Sbjct: 90 SSAYLTALDHRVRHLVAVDA-------------------------SGKAIGVASE----- 119
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTD-TVLMATKKMLELRLSSAV 179
F L R+ L + + + + P D +V A + ML R S +
Sbjct: 120 --------TDFRRYLTLRLL-SQLDDLTAVMDRDLPLLPPDGSVAQARRLMLRYRASYVL 170
Query: 180 VTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGK 239
+ +P GILT +DI + ++ Q A +V VM D+P+ DA +M D
Sbjct: 171 IAEGRRPLGILTERDIPL-LLGQGKQARGLIVRDVMRSPVRVIRDDSPVSDAACLMQDEG 229
Query: 240 FLHLPVVDRDGDVVDVVDVIHITHAAVATEILLDQIMRQ 278
HL VVD DG V ++ +H + +L D R+
Sbjct: 230 LRHLAVVDADGLVTGML-TLHNLMERIGFNLLQDDTKRR 267
>gi|39936479|ref|NP_948755.1| hypothetical protein RPA3416 [Rhodopseudomonas palustris CGA009]
gi|192292265|ref|YP_001992870.1| hypothetical protein Rpal_3897 [Rhodopseudomonas palustris TIE-1]
gi|39650335|emb|CAE28857.1| protein with 2 CBS domains [Rhodopseudomonas palustris CGA009]
gi|192286014|gb|ACF02395.1| CBS domain containing protein [Rhodopseudomonas palustris TIE-1]
Length = 142
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A RR+ A+L+ L GIL+++D+ + R + P+ VMTR+ D
Sbjct: 30 LAERRIGAVLVMHGTRLE-GILSERDVVRVLADRGPAALDEPIGAVMTRDVFTCRQDDTV 88
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
E +++M GKFRHLPV+E+ V+ L+ I + ++ E
Sbjct: 89 GEIMERMTAGKFRHLPVMEHDRVVGLISIGDIVKSRLSEYE 129
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 143 SLSTIIPEKSKVV-TISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVIS 201
++ I+ K + + T+ + A K + E R+ + +V + GIL+ +D++ RV++
Sbjct: 2 TVRAILETKGRYIHTVEAEARLASAVKTLAERRIGAVLVMHGTRLEGILSERDVV-RVLA 60
Query: 202 QNLPAD-STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
PA + VMT + D + + + M GKF HLPV++ D
Sbjct: 61 DRGPAALDEPIGAVMTRDVFTCRQDDTVGEIMERMTAGKFRHLPVMEHD 109
>gi|172063607|ref|YP_001811258.1| signal-transduction protein [Burkholderia ambifaria MC40-6]
gi|171996124|gb|ACB67042.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria MC40-6]
Length = 153
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+ D + + GI+T++D A +V+ +E + + T V ++MT +V
Sbjct: 35 MAEKGIGALLVVDGDDI-AGIVTERDYARKVVLQERSSKATRVEEIMTAKVRYVEPSQST 93
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
E + M + + RHLPV++ G++I L+ I + IA
Sbjct: 94 DECMALMTEHRMRHLPVLDGGKLIGLISIGDLVKSVIA 131
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+ T++ D V A K M E + + +V + GI+T +D +V+ Q + +T VE+
Sbjct: 19 IYTVTKNDFVYDAIKLMAEKGIGALLVVDGDDIAGIVTERDYARKVVLQERSSKATRVEE 78
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
+MT + + +M + + HLPV+D G ++ ++ + + + +A +
Sbjct: 79 IMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIADQ 133
>gi|186472103|ref|YP_001859445.1| signal-transduction protein [Burkholderia phymatum STM815]
gi|184194435|gb|ACC72399.1| putative signal-transduction protein with CBS domains [Burkholderia
phymatum STM815]
Length = 144
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA +++ AL++ + N + GI+T++D A +++ + + + TPV +M+ FV +
Sbjct: 32 MADKQIGALIVKE-NGAIAGIVTERDYARKIVLMDRSSKTTPVRDIMSSAVRFVRPEQTT 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
E + M + + RHLPV+EN +I ++ I + + IA +
Sbjct: 91 DECMALMTERRMRHLPVMENDRLIGMVSIGDLVKNIIAEQQ 131
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 48/98 (48%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
+V TI TD+V A K M + ++ + +V GI+T +D +++ + + +T V
Sbjct: 14 QEVYTIEATDSVYNAIKLMADKQIGALIVKENGAIAGIVTERDYARKIVLMDRSSKTTPV 73
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
+M+ + + + +M + + HLPV++ D
Sbjct: 74 RDIMSSAVRFVRPEQTTDECMALMTERRMRHLPVMEND 111
>gi|163851685|ref|YP_001639728.1| hypothetical protein Mext_2262 [Methylobacterium extorquens PA1]
gi|218530491|ref|YP_002421307.1| signal transduction protein with CBS domains [Methylobacterium
extorquens CM4]
gi|240138851|ref|YP_002963326.1| hypothetical protein MexAM1_META1p2261 [Methylobacterium extorquens
AM1]
gi|254561457|ref|YP_003068552.1| hypothetical protein METDI3043 [Methylobacterium extorquens DM4]
gi|418062143|ref|ZP_12699951.1| putative signal transduction protein with CBS domains
[Methylobacterium extorquens DSM 13060]
gi|163663290|gb|ABY30657.1| CBS domain containing protein [Methylobacterium extorquens PA1]
gi|218522794|gb|ACK83379.1| putative signal transduction protein with CBS domains
[Methylobacterium extorquens CM4]
gi|240008823|gb|ACS40049.1| conserved hypothetical protein with 2 CBS domains [Methylobacterium
extorquens AM1]
gi|254268735|emb|CAX24696.1| conserved hypothetical protein with 2 CBS domains [Methylobacterium
extorquens DM4]
gi|373564304|gb|EHP90425.1| putative signal transduction protein with CBS domains
[Methylobacterium extorquens DSM 13060]
Length = 143
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 55/101 (54%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A +R+ AL++ D+ + GIL+++D+ + + + + P+S MT
Sbjct: 30 LAEKRIGALVVGDAEGRVIGILSERDVMRALASEGASALDRPISHHMTTKVVTCTRRASI 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
+ ++ M +G+FRHLPVVE G ++ ++ I + IA +E
Sbjct: 90 EDVMETMTEGRFRHLPVVEEGRLVGVVSIGDVVKRRIATVE 130
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 3/137 (2%)
Query: 143 SLSTIIPEKS-KVVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILMRVI 200
+++ I+ EK VVT+ P T+ A + E R+ + VV E + GIL+ +D++ +
Sbjct: 2 TVARILAEKGDSVVTLPPHRTIDEAIHLLAEKRIGALVVGDAEGRVIGILSERDVMRALA 61
Query: 201 SQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIH 260
S+ A + MT T I D + M +G+F HLPVV+ +G +V VV +
Sbjct: 62 SEGASALDRPISHHMTTKVVTCTRRASIEDVMETMTEGRFRHLPVVE-EGRLVGVVSIGD 120
Query: 261 ITHAAVATEILLDQIMR 277
+ +AT Q MR
Sbjct: 121 VVKRRIATVEAEHQAMR 137
>gi|89054406|ref|YP_509857.1| signal-transduction protein [Jannaschia sp. CCS1]
gi|88863955|gb|ABD54832.1| putative signal-transduction protein with CBS domains [Jannaschia
sp. CCS1]
Length = 144
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
++A+R+ AL+++ + GIL+++DI + + PV +MT D
Sbjct: 31 LSAKRIGALVVSSDGTDIAGILSERDIVRAIGSGGPGCLADPVESLMTSKIISATRDESV 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIAR--MERAAEKG 107
+ L KM QG+FRH+PV++ ++ L+ I + +A ME+ A +G
Sbjct: 91 EQVLGKMTQGRFRHMPVMDGAAMVGLISIGDVVKAQLAELAMEKEALEG 139
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 62/125 (49%), Gaps = 9/125 (7%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVISQNLP---A 206
+ VVTI+P +V A K + R+ + VV+ + GIL+ +DI+ R I P A
Sbjct: 12 QGDVVTIAPGSSVGEAAKTLSAKRIGALVVSSDGTDIAGILSERDIV-RAIGSGGPGCLA 70
Query: 207 DSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG--DVVDVVDVIHITHA 264
D VE +MT AT D + L M G+F H+PV+D ++ + DV+ A
Sbjct: 71 DP--VESLMTSKIISATRDESVEQVLGKMTQGRFRHMPVMDGAAMVGLISIGDVVKAQLA 128
Query: 265 AVATE 269
+A E
Sbjct: 129 ELAME 133
>gi|114562724|ref|YP_750237.1| cyclic nucleotide-binding protein [Shewanella frigidimarina NCIMB
400]
gi|114334017|gb|ABI71399.1| cyclic nucleotide-binding protein [Shewanella frigidimarina NCIMB
400]
Length = 615
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RV ++L+ D N L GILTD+D+ R+IA L++ T VS+ MT NP ++ L
Sbjct: 176 MREHRVSSVLVID-NQKLTGILTDRDLRNRIIAEGLDVN-TLVSQAMTINPVTTHANALV 233
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
EA+ M + HLPVV+ + ++
Sbjct: 234 FEAMLAMSEHNIHHLPVVDGSRALGMI 260
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
S+ + I +V+ A K M E R+SS +V K GILT +D+ R+I++ L + TLV
Sbjct: 158 SQPIIIDAHASVMDAAKLMREHRVSSVLVIDNQKLTGILTDRDLRNRIIAEGLDVN-TLV 216
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
+ MT NP + + +A+ M + HLPVVD
Sbjct: 217 SQAMTINPVTTHANALVFEAMLAMSEHNIHHLPVVD 252
>gi|407783415|ref|ZP_11130616.1| signal-transduction protein [Oceanibaculum indicum P24]
gi|407202140|gb|EKE72135.1| signal-transduction protein [Oceanibaculum indicum P24]
Length = 142
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A +R+ ++L+ D + GIL+++DI + A + PVS++MT D
Sbjct: 30 LAEKRIGSVLVMDREKI-AGILSERDIVRTLAAEGAACLDGPVSRLMTAKVVTCRPDQSI 88
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116
+ ++ M G+FRH+PVV +G + ++ I + R+E A E+ + +AA V G
Sbjct: 89 SDVMELMTSGRFRHVPVVADGRLAGMISIGDVVK---WRLEEAQEEVRQMAAYVSG 141
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 2/113 (1%)
Query: 150 EKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADST 209
+ + VV + P+ V A K + E R+ S +V K GIL+ +DI+ + ++
Sbjct: 10 KGADVVAVPPSLPVSDAAKLLAEKRIGSVLVMDREKIAGILSERDIVRTLAAEGAACLDG 69
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVV--DRDGDVVDVVDVIH 260
V ++MT D I D + +M G+F H+PVV R ++ + DV+
Sbjct: 70 PVSRLMTAKVVTCRPDQSISDVMELMTSGRFRHVPVVADGRLAGMISIGDVVK 122
>gi|417822704|ref|ZP_12469302.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HE48]
gi|340048834|gb|EGR09750.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HE48]
Length = 625
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 5/105 (4%)
Query: 20 GILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE 79
G++TD+D+ V+A + + E P+S VMT+NP + D ++A+ M+Q R LPVV+
Sbjct: 205 GVVTDRDMTRSVVATGIGIHE-PISTVMTQNPQLIQGDDKVIQAISIMLQYNIRCLPVVK 263
Query: 80 NGEVIALLDIAKCLYD----AIARMERAAEKGKAIAAAVEGVEKH 120
EV+ LL + +++ A+ +E+ A A VEK
Sbjct: 264 GNEVVGLLTTSHLVHNHRTQALFLIEKIKYASSVNALAALNVEKQ 308
>gi|239832140|ref|ZP_04680469.1| CBS domain-containing protein [Ochrobactrum intermedium LMG 3301]
gi|444308290|ref|ZP_21143939.1| hypothetical protein D584_00720 [Ochrobactrum intermedium M86]
gi|239824407|gb|EEQ95975.1| CBS domain-containing protein [Ochrobactrum intermedium LMG 3301]
gi|443488428|gb|ELT51181.1| hypothetical protein D584_00720 [Ochrobactrum intermedium M86]
Length = 143
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%)
Query: 5 RVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEAL 64
++ AL++ D + GIL+++D+ V A+E PV++VMT + +
Sbjct: 34 KIGALVVCDEAGRIKGILSERDVVRAVAAQETKAMSMPVAEVMTAKVQVCREHHTINQVM 93
Query: 65 QKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
+ M + +FRH+PV E G+++ ++ I + I +ER AE
Sbjct: 94 EIMTRSRFRHMPVEEGGKLVGIVSIGDVVKRRIEDVEREAE 134
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 143 SLSTIIPEKSK-VVTISPTDTVLMATKKMLELRLSSAVVTVE-NKPRGILTSKDILMRVI 200
++ +I+ K + VV I+P DT+ A + + ++ + VV E + +GIL+ +D++ V
Sbjct: 2 TVRSILETKGRDVVVIAPADTLSHAVAMLNKHKIGALVVCDEAGRIKGILSERDVVRAVA 61
Query: 201 SQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+Q A S V +VMT + I + IM +F H+P V+ G +V +V +
Sbjct: 62 AQETKAMSMPVAEVMTAKVQVCREHHTINQVMEIMTRSRFRHMP-VEEGGKLVGIVSI 118
>gi|398967935|ref|ZP_10682143.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM30]
gi|398144279|gb|EJM33124.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM30]
Length = 146
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 58/99 (58%), Gaps = 3/99 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + V ALL+ D++ +L GI++++D A +++ + TPV +M +P +
Sbjct: 34 MAEKNVGALLVVDNDEVL-GIISERDYARKLVLHGRSSVGTPVRDIMV-SPVITVDTHQT 91
Query: 61 VE-ALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
V+ L M + RHLPVVENG++I LL I + +AIA
Sbjct: 92 VDTCLGIMSDKRLRHLPVVENGKLIGLLSIGDLVKEAIA 130
>gi|420254612|ref|ZP_14757606.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. BT03]
gi|398048356|gb|EJL40830.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. BT03]
Length = 144
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA +++ AL++ + N + GI+T++D A +++ + + + TPV +M+ FV D
Sbjct: 32 MADKQIGALIVKE-NGAIAGIVTERDYARKIVLMDRSSKTTPVRDIMSSAVRFVRPDQTT 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
E + M + + RHLPV++N ++I ++ I + IA +
Sbjct: 91 DECMALMTERRMRHLPVLDNEQLIGMVSIGDLVKTIIAEQQ 131
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 48/97 (49%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
+V TI +D+V A K M + ++ + +V GI+T +D +++ + + +T V
Sbjct: 15 EVYTIEASDSVYNAIKLMADKQIGALIVKENGAIAGIVTERDYARKIVLMDRSSKTTPVR 74
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
+M+ D + + +M + + HLPV+D +
Sbjct: 75 DIMSSAVRFVRPDQTTDECMALMTERRMRHLPVLDNE 111
>gi|330799665|ref|XP_003287863.1| hypothetical protein DICPUDRAFT_91991 [Dictyostelium purpureum]
gi|325082133|gb|EGC35626.1| hypothetical protein DICPUDRAFT_91991 [Dictyostelium purpureum]
Length = 241
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +RV A ++ D N + GI +++D ++V R L ET V +M+ V D+ A
Sbjct: 128 MNEKRVGATIVVDKNNRMTGIFSERDYLSKVDLRGLTPRETLVKDIMSSKVITVSGDSGA 187
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIA 90
+ L M + RHLPV++N +I +L I
Sbjct: 188 SKCLSIMTKRNIRHLPVLDNKRLIGMLSIG 217
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSA-VVTVENKPRGILTSKDILMRVISQNLPADSTL 210
++V + TV A K M E R+ + VV N+ GI + +D L +V + L TL
Sbjct: 110 GRIVRVDEDSTVYDAIKVMNEKRVGATIVVDKNNRMTGIFSERDYLSKVDLRGLTPRETL 169
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD--------GDVVDVV 256
V+ +M+ + D+ L IM HLPV+D GD+V +
Sbjct: 170 VKDIMSSKVITVSGDSGASKCLSIMTKRNIRHLPVLDNKRLIGMLSIGDIVKYI 223
>gi|456356192|dbj|BAM90637.1| conserved hypothetical protein [Agromonas oligotrophica S58]
Length = 142
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A R++ A+L+ S A + GIL+++DI + R + P+S VMTR
Sbjct: 30 LADRKIGAVLVM-SGARMEGILSERDIVRALGERGAAVLAEPLSSVMTRRVVNCKPQDTV 88
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIA 90
++ M GKFRHLPV+E G V+ L+ I
Sbjct: 89 ASIMEMMTNGKFRHLPVIEGGVVVGLISIG 118
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNL-----PAD 207
KV ++ P T+ A K + + ++ + +V + GIL+ +DI+ + + P
Sbjct: 13 KVESVEPETTLADAAKLLADRKIGAVLVMSGARMEGILSERDIVRALGERGAAVLAEPLS 72
Query: 208 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
S + +V+ P+ DT + + +M +GKF HLPV++ G VV ++ +
Sbjct: 73 SVMTRRVVNCKPQ----DT-VASIMEMMTNGKFRHLPVIE-GGVVVGLISI 117
>gi|188581471|ref|YP_001924916.1| signal-transduction protein with CBS domains [Methylobacterium
populi BJ001]
gi|179344969|gb|ACB80381.1| putative signal-transduction protein with CBS domains
[Methylobacterium populi BJ001]
Length = 143
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 56/101 (55%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A +++ AL++ D+ + GIL+++D+ + + + + P+S MT
Sbjct: 30 LAEKQIGALVVGDAEGRVIGILSERDVMRALASEGASALDRPISHYMTAKVVTCTRRASI 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
+ ++ M +G+FRHLPVVE+G ++ ++ I + IA +E
Sbjct: 90 EDVMETMTEGRFRHLPVVEDGHLVGVVSIGDVVKRRIATVE 130
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 3/128 (2%)
Query: 143 SLSTIIPEK-SKVVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILMRVI 200
+++ I+ EK S VVT+ P T+ A + E ++ + VV E + GIL+ +D++ +
Sbjct: 2 TVARILAEKGSSVVTVPPHRTIDEAIHLLAEKQIGALVVGDAEGRVIGILSERDVMRALA 61
Query: 201 SQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIH 260
S+ A + MT T I D + M +G+F HLPVV+ DG +V VV +
Sbjct: 62 SEGASALDRPISHYMTAKVVTCTRRASIEDVMETMTEGRFRHLPVVE-DGHLVGVVSIGD 120
Query: 261 ITHAAVAT 268
+ +AT
Sbjct: 121 VVKRRIAT 128
>gi|71907424|ref|YP_285011.1| CBS [Dechloromonas aromatica RCB]
gi|71847045|gb|AAZ46541.1| CBS protein [Dechloromonas aromatica RCB]
Length = 144
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 8 ALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKM 67
A+L+ D LL GI T++DI R +A + T ++ +MTRN V D AL M
Sbjct: 38 AILIID-KGLLAGICTERDIVFRAVANGCDPANTAITTIMTRNIQTVSPDKPFGHALHLM 96
Query: 68 VQGKFRHLPVVEN-GEVIALL 87
+G FRH+PVV++ G + LL
Sbjct: 97 YEGGFRHIPVVDDAGHPVGLL 117
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%)
Query: 156 TISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVM 215
T TV A M E S+ ++ + GI T +DI+ R ++ +T + +M
Sbjct: 17 TTGSGTTVREAAIIMKEWHSSAILIIDKGLLAGICTERDIVFRAVANGCDPANTAITTIM 76
Query: 216 TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
T N + + D P ALH+M++G F H+PVVD G V ++
Sbjct: 77 TRNIQTVSPDKPFGHALHLMYEGGFRHIPVVDDAGHPVGLL 117
>gi|344344540|ref|ZP_08775402.1| cyclic nucleotide-binding protein [Marichromatium purpuratum 984]
gi|343803947|gb|EGV21851.1| cyclic nucleotide-binding protein [Marichromatium purpuratum 984]
Length = 619
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ RV +LL+ + L G++TD+D+ +R +A L E PV ++MT + DTL
Sbjct: 178 MSEHRVSSLLIMEGEHL-AGMITDRDLRSRCLAAGLP-SERPVREIMTERLHSIEPDTLG 235
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
EAL M + HLPV+E G V+ L+
Sbjct: 236 FEALLTMTRLNVHHLPVIERGRVMGLV 262
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKV 214
++ P ++ A M E R+SS ++ G++T +D+ R ++ LP++ V ++
Sbjct: 163 ISTGPETSIREAAGIMSEHRVSSLLIMEGEHLAGMITDRDLRSRCLAAGLPSERP-VREI 221
Query: 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILL 272
MT DT +AL M HLPV++R G V+ +V +T A + L
Sbjct: 222 MTERLHSIEPDTLGFEALLTMTRLNVHHLPVIER-GRVMGLVSSTDLTRFQSANAVYL 278
>gi|188583481|ref|YP_001926926.1| KpsF/GutQ family protein [Methylobacterium populi BJ001]
gi|179346979|gb|ACB82391.1| KpsF/GutQ family protein [Methylobacterium populi BJ001]
Length = 341
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 3 ARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVE 62
A+ ++L+ D+ L GILTD D+ + +RE L+ PV VMT+NP + +TL +
Sbjct: 247 AKGFGSVLVVDAEGALAGILTDGDVRRAIFSRE-GLDRMPVEAVMTKNPRTITPETLLAK 305
Query: 63 ALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
ALQ K L VVE+G + L+ L +A
Sbjct: 306 ALQIQEAMKITALVVVEDGRPVGLVHYHDLLRTGVA 341
>gi|307609537|emb|CBW99035.1| hypothetical protein LPW_08201 [Legionella pneumophila 130b]
Length = 144
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + + AL++ D++A L GI++++DI + L+LE VS V+ N T +LS +
Sbjct: 32 MVEKDIGALVVFDNDARLIGIVSERDILRCYFHKNLSLETAKVSDVVYTNVT-ILSPHDS 90
Query: 61 VE-ALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
VE A+Q + + K RH+ + E GE++A+L I LY + R E
Sbjct: 91 VEKAMQVITETKRRHVLIQEEGELLAILSIGDLLYHVLEDKLRVIE 136
>gi|374855292|dbj|BAL58153.1| CBS domain containing protein [uncultured Acidobacteria bacterium]
Length = 170
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKV 214
VT+SP D V A M + R+ S +V K GI T + L++++ + + + +V
Sbjct: 54 VTVSPDDPVGRALDLMRQHRIGSVLVVEGGKLVGIFTERGALLQLVGTSADVKTLRMREV 113
Query: 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
MTP+P D + ALH M G+F LPVV DG V VV +
Sbjct: 114 MTPDPVVLHEDDTLAFALHQMSIGEFRRLPVVRSDGRPVGVVSI 157
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M R+ ++L+ + L+ GI T++ +++ +++ + +VMT +P + D
Sbjct: 69 MRQHRIGSVLVVEGGKLV-GIFTERGALLQLVGTSADVKTLRMREVMTPDPVVLHEDDTL 127
Query: 61 VEALQKMVQGKFRHLPVVENG----EVIALLDIAKCLY 94
AL +M G+FR LPVV + V+++ DI + ++
Sbjct: 128 AFALHQMSIGEFRRLPVVRSDGRPVGVVSIKDILRYIF 165
>gi|398895284|ref|ZP_10647130.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM55]
gi|398181076|gb|EJM68648.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM55]
Length = 146
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 58/99 (58%), Gaps = 3/99 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + V ALL+ D++ +L GI++++D A +++ + TPV +M +P +
Sbjct: 34 MAEKNVGALLVVDNDEVL-GIISERDYARKLVLHGRSSVGTPVRDIMV-SPVITVDTHQT 91
Query: 61 VE-ALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
V+ L M + RHLPVVENG++I LL I + +AIA
Sbjct: 92 VDTCLGIMSDKRLRHLPVVENGKLIGLLSIGDLVKEAIA 130
>gi|387792221|ref|YP_006257286.1| putative signal transduction protein [Solitalea canadensis DSM
3403]
gi|379655054|gb|AFD08110.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Solitalea canadensis DSM 3403]
Length = 144
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
V TISP+ TV A + ++E + + +V + GI T +D +VI + + TL+ +
Sbjct: 15 VFTISPSHTVYDALELLVEKNIGALMVVDNERFVGIFTERDYARKVILKGRSSKETLIGE 74
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD--------GDVVDVV 256
+MT P TID I + +M + HLPVV+ D GDVV +
Sbjct: 75 IMTSTPVSVTIDDSIEHCMKLMTNKFIRHLPVVENDKLAGLISIGDVVKYI 125
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+ + + AL++ D N GI T++D A +VI + + +ET + ++MT P V D +
Sbjct: 31 LVEKNIGALMVVD-NERFVGIFTERDYARKVILKGRSSKETLIGEIMTSTPVSVTIDD-S 88
Query: 61 VEALQKMVQGKF-RHLPVVENGEVIALLDIA 90
+E K++ KF RHLPVVEN ++ L+ I
Sbjct: 89 IEHCMKLMTNKFIRHLPVVENDKLAGLISIG 119
>gi|30250323|ref|NP_842393.1| hypothetical protein NE2398 [Nitrosomonas europaea ATCC 19718]
gi|30181118|emb|CAD86310.1| CBS domain [Nitrosomonas europaea ATCC 19718]
Length = 146
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA + ALL+ L+ GILT++D + + + +++T V ++MTR +V +
Sbjct: 31 MAADNIGALLVMKDEKLV-GILTERDFSRKSYLLDKPVKDTQVKEIMTRQVAYVDLNNTN 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
+ + + + + RHLPV+++G+VI LL I + DAI++ +
Sbjct: 90 EDCMALITEMRVRHLPVLDDGKVIGLLSIGDLVKDAISQHQ 130
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 71/137 (51%), Gaps = 3/137 (2%)
Query: 143 SLSTIIPEKSK-VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVIS 201
++ ++ EK VV I P D+V A +KM + + +V + K GILT +D +
Sbjct: 3 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMKDEKLVGILTERDFSRKSYL 62
Query: 202 QNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHI 261
+ P T V+++MT ++ D + ++ + + HLPV+D DG V+ ++ + +
Sbjct: 63 LDKPVKDTQVKEIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDL 121
Query: 262 THAAVAT-EILLDQIMR 277
A++ + +++Q+ R
Sbjct: 122 VKDAISQHQFVINQLER 138
>gi|409097786|ref|ZP_11217810.1| hypothetical protein PagrP_05001 [Pedobacter agri PB92]
Length = 142
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 3/99 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNP-TFVLSDTL 59
M + + A+L+ N L GI T++D A ++I + + ++T +++VMT NP T LSD++
Sbjct: 31 MTDKNISAVLVM-KNEKLSGIFTERDYARKIILQGKSSKDTLINEVMTPNPITITLSDSI 89
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
++ M + RHLP+V N EVI +L I + IA
Sbjct: 90 DY-CMELMTEKHIRHLPIVVNEEVIGMLSIGDMVKFIIA 127
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%)
Query: 150 EKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADST 209
++ +++ + T +VL A K M + +S+ +V K GI T +D ++I Q + T
Sbjct: 11 KQPRIIAVPETISVLDALKVMTDKNISAVLVMKNEKLSGIFTERDYARKIILQGKSSKDT 70
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVV 246
L+ +VMTPNP T+ I + +M + HLP+V
Sbjct: 71 LINEVMTPNPITITLSDSIDYCMELMTEKHIRHLPIV 107
>gi|390568013|ref|ZP_10248325.1| signal-transduction protein [Burkholderia terrae BS001]
gi|389940016|gb|EIN01833.1| signal-transduction protein [Burkholderia terrae BS001]
Length = 144
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA +++ AL++ + N + GI+T++D A +++ + + + TPV +M+ FV D
Sbjct: 32 MADKQIGALIVKE-NGSIAGIVTERDYARKIVLMDRSSKTTPVRDIMSSAVRFVRPDQTT 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
E + M + + RHLPV++N ++I ++ I + IA +
Sbjct: 91 DECMALMTERRMRHLPVLDNEQLIGMVSIGDLVKTIIAEQQ 131
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 48/97 (49%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
+V TI +D+V A K M + ++ + +V GI+T +D +++ + + +T V
Sbjct: 15 EVYTIEASDSVYNAIKLMADKQIGALIVKENGSIAGIVTERDYARKIVLMDRSSKTTPVR 74
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
+M+ D + + +M + + HLPV+D +
Sbjct: 75 DIMSSAVRFVRPDQTTDECMALMTERRMRHLPVLDNE 111
>gi|294627296|ref|ZP_06705882.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292598378|gb|EFF42529.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 119
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVL-SDTL 59
MA + V A+L+ D L+ GI++++D A +V+ R+ + T V+++ + V SDT+
Sbjct: 8 MAEKAVGAVLVMDGPRLV-GIVSERDYAHKVVLRDRSSSTTSVAEITSAEVVTVSPSDTV 66
Query: 60 AVEALQKMVQGKFRHLPVVENGE---VIALLDIAKCLYDA 96
+Q M G+FRHLPVVENG VI++ D+ K + +A
Sbjct: 67 E-RCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEA 105
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 178 AVVTVENKPR--GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIM 235
V V + PR GI++ +D +V+ ++ + +T V ++ + + + + +M
Sbjct: 14 GAVLVMDGPRLVGIVSERDYAHKVVLRDRSSSTTSVAEITSAEVVTVSPSDTVERCMQLM 73
Query: 236 HDGKFLHLPVVDRDGDVVDVVDVIHITHAAV-ATEILLDQIMR 277
DG+F HLPVV+ +G V V+ + + A + A +DQ+ R
Sbjct: 74 TDGRFRHLPVVE-NGRVQGVISIGDLVKAVIEAQRQDIDQLQR 115
>gi|293606465|ref|ZP_06688823.1| CBS domain protein [Achromobacter piechaudii ATCC 43553]
gi|292815088|gb|EFF74211.1| CBS domain protein [Achromobacter piechaudii ATCC 43553]
Length = 154
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA RR+ A+++ +L G+L+++D A +V+ ++ + T V +MT + +V
Sbjct: 40 MAERRIGAVVVVQGETVL-GMLSERDYARKVVLQDRSSRTTKVRDIMTDSVYYVGPGDTR 98
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYD-------AIARMERAAEKGKA 109
+ M + FRHLPV+EN ++I LL I + D I +ER G A
Sbjct: 99 EHCMAMMTERHFRHLPVIENEKLIGLLSIGDLVKDIMSEQKFIIHELERYISGGHA 154
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 135 LRERMFRPSLSTIIPEKSK--VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTS 192
+RE + + +++ I+ EKS VVT+SP +V A K M E R+ + VV G+L+
Sbjct: 4 IREHIVK-TVAEILREKSNNAVVTVSPDSSVFDAIKTMAERRIGAVVVVQGETVLGMLSE 62
Query: 193 KDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
+D +V+ Q+ + +T V +MT + + +M + F HLPV++ +
Sbjct: 63 RDYARKVVLQDRSSRTTKVRDIMTDSVYYVGPGDTREHCMAMMTERHFRHLPVIENE 119
>gi|156937391|ref|YP_001435187.1| signal transduction protein [Ignicoccus hospitalis KIN4/I]
gi|156566375|gb|ABU81780.1| putative signal transduction protein with CBS domains [Ignicoccus
hospitalis KIN4/I]
Length = 138
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKV 214
+ +SP ++V+ KKMLE SA+V ++K GI+T +D+L +S+ V
Sbjct: 20 LVVSPDESVVDVAKKMLEHGYGSALVIEDDKLIGIVTERDLLY-ALSEGEEGVKLKASDV 78
Query: 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
MT +P T I++A+ IM D HLPVVD G V VV
Sbjct: 79 MTEDPISVKAKTDIMEAIKIMKDANVRHLPVVDDKGRPVGVV 120
>gi|156129382|gb|ABU50910.1| putative CBS domain protein [Pseudomonas sp. WBC-3]
Length = 146
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + AL + + N + GI++++D A +V+ + + TPV +M +P +S L
Sbjct: 34 MADKNIGALAVVE-NGQVVGIVSERDYARKVVLKGRSSVGTPVRDIMN-SPVITVSANLC 91
Query: 61 VE-ALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDA 96
VE + M + RHLPVVE+GE+I LL I + +A
Sbjct: 92 VEHCMTIMTESHLRHLPVVEDGELIGLLSIGDLVKEA 128
Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 150 EKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADST 209
+ KV +I+P + VL A K M + + + V + GI++ +D +V+ + + T
Sbjct: 14 QNQKVHSINPCEMVLDALKLMADKNIGALAVVENGQVVGIVSERDYARKVVLKGRSSVGT 73
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
V +M + + + + IM + HLPVV+ DG+++ ++ +
Sbjct: 74 PVRDIMNSPVITVSANLCVEHCMTIMTESHLRHLPVVE-DGELIGLLSI 121
>gi|164687916|ref|ZP_02211944.1| hypothetical protein CLOBAR_01561 [Clostridium bartlettii DSM
16795]
gi|164602329|gb|EDQ95794.1| glycine betaine/L-proline transport ATP binding subunit
[Clostridium bartlettii DSM 16795]
Length = 378
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 7/88 (7%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +VD++L+TD N LL GILT K++ R+ +++ + KVM ++P F+ D
Sbjct: 275 MRTNKVDSILVTDKNNLLVGILTVKEL------RQNGIQDYYIYKVMNQDPLFIYEDCNL 328
Query: 61 VEALQKMVQGKFRHLPVVE-NGEVIALL 87
+E L M H+PVV +G+++ L+
Sbjct: 329 IEILNIMNNKNVGHIPVVSRDGQLVGLI 356
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 160 TDTVLMATKKMLELRLSSAVVTVENKPR-GILTSKDILMRVISQNLPADSTLVEKVMTPN 218
T TV+ A + M ++ S +VT +N GILT K++ QN D + KVM +
Sbjct: 265 TRTVIQAMEIMRTNKVDSILVTDKNNLLVGILTVKEL-----RQNGIQDY-YIYKVMNQD 318
Query: 219 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
P D +++ L+IM++ H+PVV RDG +V ++
Sbjct: 319 PLFIYEDCNLIEILNIMNNKNVGHIPVVSRDGQLVGLI 356
>gi|21232293|ref|NP_638210.1| hypothetical protein XCC2862 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66767573|ref|YP_242335.1| hypothetical protein XC_1246 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188990688|ref|YP_001902698.1| hypothetical protein xccb100_1292 [Xanthomonas campestris pv.
campestris str. B100]
gi|21114059|gb|AAM42134.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66572905|gb|AAY48315.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167732448|emb|CAP50642.1| Conserved hypothetical protein [Xanthomonas campestris pv.
campestris]
Length = 142
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + A+L+ + L+ GI++++D A +V+ R+ + T V+++M+ + +S +
Sbjct: 31 MADKSIGAVLVMEGERLV-GIVSERDYARKVVLRDRSSSSTSVAEIMS-HAVVTVSPADS 88
Query: 61 VE-ALQKMVQGKFRHLPVVENGE---VIALLDIAKCLYDA 96
VE +Q M G+FRHLPVV+NG VI++ D+ K + +A
Sbjct: 89 VEHCMQLMTDGRFRHLPVVDNGRVQGVISIGDLVKAVIEA 128
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 66/126 (52%), Gaps = 2/126 (1%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
+V +++ V+ A + M + + + +V + GI++ +D +V+ ++ + ST V
Sbjct: 14 EVFSVAADAAVIEAIRLMADKSIGAVLVMEGERLVGIVSERDYARKVVLRDRSSSSTSVA 73
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV-ATEIL 271
++M+ + + + +M DG+F HLPVVD +G V V+ + + A + A +
Sbjct: 74 EIMSHAVVTVSPADSVEHCMQLMTDGRFRHLPVVD-NGRVQGVISIGDLVKAVIEAQQHD 132
Query: 272 LDQIMR 277
+DQ+ R
Sbjct: 133 IDQLQR 138
>gi|385204300|ref|ZP_10031170.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. Ch1-1]
gi|385184191|gb|EIF33465.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. Ch1-1]
Length = 164
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 62/124 (50%), Gaps = 7/124 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA RRV AL++ + GI+T++D A +++ + + TPV +M+ +V D
Sbjct: 32 MAHRRVGALIVAH-EGRIAGIVTERDYARKIVLMDRSSRHTPVRDIMSTAVRYVSPDQTT 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEK------GKAIAAAV 114
E + M + + R+LPV+ G+VI ++ I + + I E+ ++ G A
Sbjct: 91 EECMALMTEYRIRYLPVITAGQVIGMVSIGDLVQNLIVEQEQTIQQLEHYIHGNGFQAVQ 150
Query: 115 EGVE 118
G++
Sbjct: 151 SGLQ 154
>gi|398858831|ref|ZP_10614516.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM79]
gi|398238236|gb|EJN23969.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM79]
Length = 146
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+ V AL + ++ GI++++D A +++ + + TPVS +M P +
Sbjct: 34 MAAKNVGALPVLKEGKVV-GIISERDYARKLVLKGRSSVGTPVSDIMV-APVITVDTHQT 91
Query: 61 VE-ALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
VE + M + + RHLPVVENGE+I LL I + +AIA
Sbjct: 92 VETCMGIMSEKRLRHLPVVENGELIGLLSIGDLVKEAIA 130
>gi|403718753|ref|ZP_10943476.1| hypothetical protein KILIM_107_00040 [Kineosphaera limosa NBRC
100340]
gi|403208309|dbj|GAB98159.1| hypothetical protein KILIM_107_00040 [Kineosphaera limosa NBRC
100340]
Length = 621
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA R V ++L+ N +L GI+TD+D+ RV+A + + ++ VMT +P V + LA
Sbjct: 181 MANRDVSSVLVMSGNRIL-GIVTDRDLRKRVVAAGADTSAS-IASVMTPDPIVVSGEALA 238
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
E L M+ G HLP+VE G + ++
Sbjct: 239 FEVLLHMMDGAIHHLPIVEAGRPVGVI 265
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 166 ATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPAD-STLVEKVMTPNPECATI 224
A + M +SS +V N+ GI+T +D+ RV++ AD S + VMTP+P +
Sbjct: 177 AARMMANRDVSSVLVMSGNRILGIVTDRDLRKRVVAAG--ADTSASIASVMTPDPIVVSG 234
Query: 225 DTPIVDALHIMHDGKFLHLPVVD--RDGDVVDVVDVIHITHA 264
+ + L M DG HLP+V+ R V+ D++ + HA
Sbjct: 235 EALAFEVLLHMMDGAIHHLPIVEAGRPVGVITSTDLVRLEHA 276
>gi|56708824|ref|YP_164865.1| CBS domain-containing protein [Ruegeria pomeroyi DSS-3]
gi|56680509|gb|AAV97174.1| CBS domain protein [Ruegeria pomeroyi DSS-3]
Length = 174
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Query: 4 RRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRN-PTFVLSDTLAVE 62
+R+ A+L+TD N L GIL+++DI R+ +MTR T +TL V
Sbjct: 65 KRIGAVLVTDQNGALLGILSERDIVRRMADTPGQTLPQQAEGLMTRAVQTCAPDETLNV- 123
Query: 63 ALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAI 110
L++M +G+FRHLPV+ +G++ ++ I + + +E A K K +
Sbjct: 124 VLKRMTEGRFRHLPVMRDGKLCGMITIGDVVNFRLRELEYEALKMKQM 171
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 11/115 (9%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPR-GILTSKDILMRVI---SQNLPADST 209
V ++ P DT+ + + R+ + +VT +N GIL+ +DI+ R+ Q LP +
Sbjct: 46 VFSVRPGDTIGQVVGVLKDKRIGAVLVTDQNGALLGILSERDIVRRMADTPGQTLPQQA- 104
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV---DVIHI 261
E +MT + D + L M +G+F HLPV+ RDG + ++ DV++
Sbjct: 105 --EGLMTRAVQTCAPDETLNVVLKRMTEGRFRHLPVM-RDGKLCGMITIGDVVNF 156
>gi|317126516|ref|YP_004100628.1| CBS domain and cyclic nucleotide-regulated nucleotidyltransferase
[Intrasporangium calvum DSM 43043]
gi|315590604|gb|ADU49901.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Intrasporangium calvum DSM
43043]
Length = 620
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 9/104 (8%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEET-PVSKVMTRNPTFVLSDTL 59
MA +V +LL+ D L GI+TD+D+ TRV+A LE T PVS +MT +P D L
Sbjct: 179 MAREQVSSLLVVDGERL-TGIVTDRDLRTRVLA--AGLETTRPVSAIMTPDPVTSSPDDL 235
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERA 103
A+E + +M H+PVVE + +L + R+ERA
Sbjct: 236 AMELVLQMTSRNIHHMPVVEGDRPLGMLTSTDLM-----RLERA 274
>gi|442608733|ref|ZP_21023480.1| Predicted signal-transduction protein containing cAMP-binding and
CBS domains [Pseudoalteromonas luteoviolacea B = ATCC
29581]
gi|441750129|emb|CCQ09542.1| Predicted signal-transduction protein containing cAMP-binding and
CBS domains [Pseudoalteromonas luteoviolacea B = ATCC
29581]
Length = 612
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ RV ++++T S+ L+ G++TD+D+ RV+A E++ EE+ +S VMT P ++ +
Sbjct: 175 MSEARVSSIMITQSDKLI-GVITDRDLRNRVLAAEVSPEESVLS-VMTHKPKYIFENNRV 232
Query: 61 VEALQKMVQGKFRHLPVVE 79
AL M++ HLPV++
Sbjct: 233 FSALHLMLKHNIHHLPVLD 251
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNL-PADSTLVEK 213
VT+ P ++ A K M E R+SS ++T +K G++T +D+ RV++ + P +S L
Sbjct: 160 VTLEPEASIRDAAKAMSEARVSSIMITQSDKLIGVITDRDLRNRVLAAEVSPEESVL--S 217
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
VMT P+ + + ALH+M HLPV+D D
Sbjct: 218 VMTHKPKYIFENNRVFSALHLMLKHNIHHLPVLDED 253
>gi|301058158|ref|ZP_07199210.1| CBS domain protein [delta proteobacterium NaphS2]
gi|300447790|gb|EFK11503.1| CBS domain protein [delta proteobacterium NaphS2]
Length = 655
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ +R+ ++LLTD + GI+TDKDI +V+A+ L+ +T S++MT + ++
Sbjct: 207 MSEKRIGSVLLTDDREEVIGIVTDKDIRGKVVAQGLDY-QTKASEIMTAPVQTISGQSVC 265
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
+AL M++ + HL + ENG++ +L
Sbjct: 266 FDALLAMIKRRIHHLAIEENGKISKML 292
>gi|126668780|ref|ZP_01739728.1| hypothetical protein MELB17_07244 [Marinobacter sp. ELB17]
gi|126626763|gb|EAZ97412.1| hypothetical protein MELB17_07244 [Marinobacter sp. ELB17]
Length = 326
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 13 DSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKF 72
DSN L G+ TD D+ R + + +++ T + ++MTRN + +D LAVEAL M + K
Sbjct: 241 DSNGALIGVFTDGDL-RRSLDKNVDVHTTAIEQLMTRNGKTIRADQLAVEALNIMEEMKI 299
Query: 73 RHLPVV-ENGEVIALLDIAKCLYDAI 97
LPVV E+GE++ L++ L +
Sbjct: 300 SALPVVGEHGELVGALNMHDLLRAGV 325
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 188 GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
G+ T D L R + +N+ +T +E++MT N + D V+AL+IM + K LPVV
Sbjct: 248 GVFTDGD-LRRSLDKNVDVHTTAIEQLMTRNGKTIRADQLAVEALNIMEEMKISALPVVG 306
Query: 248 RDGDVVDVVDVIHITHAAV 266
G++V +++ + A V
Sbjct: 307 EHGELVGALNMHDLLRAGV 325
>gi|407940177|ref|YP_006855818.1| signal-transduction protein [Acidovorax sp. KKS102]
gi|407897971|gb|AFU47180.1| signal-transduction protein [Acidovorax sp. KKS102]
Length = 145
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + AL++T+ A + GI T++D A ++ T V VMT FV D +
Sbjct: 32 MADKGIGALIVTE-GASIVGIFTERDYARKIALMGRTSAVTQVKDVMTSAVMFVRPDQTS 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEK 106
+ +Q M + RHLPVV+ G+++ ++ I + D I+ + E+
Sbjct: 91 EQCMQLMSNNRLRHLPVVDGGKLVGMISIGDLVKDIISEQKFIIEQ 136
Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Query: 156 TISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVM 215
TISP +VL A + M + + + +VT GI T +D ++ + T V+ VM
Sbjct: 18 TISPAASVLDALQLMADKGIGALIVTEGASIVGIFTERDYARKIALMGRTSAVTQVKDVM 77
Query: 216 TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
T D + +M + + HLPVVD G +V ++ +
Sbjct: 78 TSAVMFVRPDQTSEQCMQLMSNNRLRHLPVVD-GGKLVGMISI 119
>gi|398840754|ref|ZP_10597986.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Pseudomonas sp. GM102]
gi|398109766|gb|EJL99682.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Pseudomonas sp. GM102]
Length = 146
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+ V AL + ++ GI++++D A +++ + + TPVS +M P +
Sbjct: 34 MAAKNVGALPVLKEGKVV-GIISERDYARKLVLKGRSSVGTPVSDIMV-APVITVDTHQT 91
Query: 61 VE-ALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
VE + M + + RHLPVVENGE+I LL I + +AIA
Sbjct: 92 VETCMGIMSEKRLRHLPVVENGELIGLLSIGDLVKEAIA 130
>gi|254434216|ref|ZP_05047724.1| CBS domain pair protein [Nitrosococcus oceani AFC27]
gi|207090549|gb|EDZ67820.1| CBS domain pair protein [Nitrosococcus oceani AFC27]
Length = 267
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMTRNP-TFVLSDTLAVEALQKMVQGKFRHLP 76
+ GI+TD+D+A R + +L+ E T +++VMT +P L+D+ EA+ M QG R +P
Sbjct: 24 IVGIVTDRDLAVRALGHKLDPENTAITEVMTPSPLMLTLADSRE-EAIALMQQGNVRRIP 82
Query: 77 VVENGEVIALLDIAKCLYDAIARMERAA 104
+ EN V+ ++ + L D A +E A
Sbjct: 83 LSENNRVVGMVTLDDLLLDEAAPLEELA 110
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 45/87 (51%)
Query: 163 VLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECA 222
+L A + M + + VV + GI+T +D+ +R + L ++T + +VMTP+P
Sbjct: 1 MLEAARAMENNSIGAIVVQDHGRIVGIVTDRDLAVRALGHKLDPENTAITEVMTPSPLML 60
Query: 223 TIDTPIVDALHIMHDGKFLHLPVVDRD 249
T+ +A+ +M G +P+ + +
Sbjct: 61 TLADSREEAIALMQQGNVRRIPLSENN 87
>gi|325293135|ref|YP_004278999.1| inosine-5`-monophosphate dehydrogenase [Agrobacterium sp. H13-3]
gi|418408398|ref|ZP_12981714.1| inosine-5`-monophosphate dehydrogenase protein [Agrobacterium
tumefaciens 5A]
gi|325060988|gb|ADY64679.1| putative inosine-5`-monophosphate dehydrogenase protein
[Agrobacterium sp. H13-3]
gi|358005312|gb|EHJ97638.1| inosine-5`-monophosphate dehydrogenase protein [Agrobacterium
tumefaciens 5A]
Length = 144
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+ A ++ AL++TD++ ++ GI T++D+ V VS MT+N ++
Sbjct: 32 LNAHKIGALVVTDADGVVLGIFTERDLVKVVAGEGAASLLQSVSVAMTKNVIRCHHNSTT 91
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113
E ++ M G+FRH+PV ++G + ++ I + I +E AE KA A
Sbjct: 92 DELMEIMTGGRFRHIPVEDDGRLAGIISIGDVVKARIGEIEAEAEHIKAYIAG 144
>gi|225458255|ref|XP_002281327.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial
[Vitis vinifera]
Length = 207
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 8/166 (4%)
Query: 107 GKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPT-DTVLM 165
G++ A +H + S P + L L T EKS T DTV
Sbjct: 25 GRSTAGRKNVFSRHECVTTSNPTMEQKGLENTTVAEVLMTKGEEKSGSWLWCRTNDTVYD 84
Query: 166 ATKKMLELRLSSAVVTVENKPR---GILTSKDILMRVISQNLPADSTLVEKVMTPNPECA 222
A K M E + S VV +P+ GI T +D + ++I+ + T V ++MT +
Sbjct: 85 AAKHMAENNIGSLVVLKPGEPKHIAGIFTERDYMRKIIAHGRSSKDTKVGEIMTDENKLV 144
Query: 223 TI--DTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
T+ DT I+ A+ ++ + + H+PV+ DG +V ++ ++ I A V
Sbjct: 145 TVSSDTNILQAMQLLTEYQIRHVPVI--DGKIVGMISIVDIVRAVV 188
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVL--SDTLAVEALQKMVQGKFRHL 75
+ GI T++D ++IA + ++T V ++MT V SDT ++A+Q + + + RH+
Sbjct: 108 IAGIFTERDYMRKIIAHGRSSKDTKVGEIMTDENKLVTVSSDTNILQAMQLLTEYQIRHV 167
Query: 76 PVVENGEVIALLDI 89
PV++ G+++ ++ I
Sbjct: 168 PVID-GKIVGMISI 180
>gi|410696588|gb|AFV75656.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Thermus oshimai JL-2]
Length = 580
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 64/119 (53%), Gaps = 9/119 (7%)
Query: 131 FIETLRERM----FRPSLSTIIPE--KSKVVTISPTDTVLMATKKMLELRLSSAVVTVEN 184
F+E L ER FR +L T + + + I+PT TV A +KM + +SS + VE
Sbjct: 116 FLEGLSERGRLQGFRANLFTPVGRLVRRAPLFIAPTATVEEAARKMAQEGVSS--LLVEG 173
Query: 185 KPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHL 243
+P GILT +D+ RV++Q LP ST V +V T DTP+ +AL M + HL
Sbjct: 174 EPLGILTDRDLRNRVLAQGLP-PSTPVGEVATRPLFALPTDTPLYEALAAMVERGIHHL 231
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVL-SDTL 59
MA V +LL+ GILTD+D+ RV+A+ L TPV +V TR P F L +DT
Sbjct: 161 MAQEGVSSLLVEGEP---LGILTDRDLRNRVLAQGLP-PSTPVGEVATR-PLFALPTDTP 215
Query: 60 AVEALQKMVQGKFRHL 75
EAL MV+ HL
Sbjct: 216 LYEALAAMVERGIHHL 231
>gi|87118536|ref|ZP_01074435.1| CBS domain protein [Marinomonas sp. MED121]
gi|86166170|gb|EAQ67436.1| CBS domain protein [Marinomonas sp. MED121]
Length = 673
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RV +LL+ + L+ GI+TD+D+ +RV+A+ L+ P++ +MTR PTF+ +L
Sbjct: 232 MTGARVSSLLVVEGETLI-GIITDRDLRSRVLAKGLS-PLMPIATIMTRTPTFLDESSLC 289
Query: 61 VEALQKMVQGKFRHLPVVENGE----VIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116
+ A M + HLP+V++ + +I DI + + M + K++AA E
Sbjct: 290 IHAQLLMSERNIHHLPIVDDRQRPVGIITATDILRNQQTSPLLMVSEISRQKSVAALAEV 349
Query: 117 VEK 119
++
Sbjct: 350 CQR 352
>gi|399545733|ref|YP_006559041.1| arabinose 5-phosphate isomerase KdsD [Marinobacter sp. BSs20148]
gi|399161065|gb|AFP31628.1| Arabinose 5-phosphate isomerase KdsD [Marinobacter sp. BSs20148]
Length = 326
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 13 DSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKF 72
DSN LL G+ TD D+ R + + +++ T + ++MT N + +D LAVEAL M + K
Sbjct: 241 DSNGLLIGVFTDGDL-RRSLDKNVDVHTTAIEQLMTHNGKTIRADQLAVEALNIMEEMKI 299
Query: 73 RHLPVV-ENGEVIALLDIAKCLYDAI 97
LPVV E+GE++ L++ L +
Sbjct: 300 SALPVVGEHGELVGALNMHDLLRAGV 325
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 188 GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
G+ T D L R + +N+ +T +E++MT N + D V+AL+IM + K LPVV
Sbjct: 248 GVFTDGD-LRRSLDKNVDVHTTAIEQLMTHNGKTIRADQLAVEALNIMEEMKISALPVVG 306
Query: 248 RDGDVVDVVDVIHITHAAV 266
G++V +++ + A V
Sbjct: 307 EHGELVGALNMHDLLRAGV 325
>gi|254512935|ref|ZP_05125001.1| CBS domain protein [Rhodobacteraceae bacterium KLH11]
gi|221532934|gb|EEE35929.1| CBS domain protein [Rhodobacteraceae bacterium KLH11]
Length = 116
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 57/107 (53%)
Query: 4 RRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEA 63
+R+ A+++TD N L GIL+++DI R+ V+ +MT D L +
Sbjct: 7 KRIGAVVVTDQNGALQGILSERDIVRRMAETPGQTLPQSVADLMTSEVKTCAPDDLLNDV 66
Query: 64 LQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAI 110
L+ M G+FRH+PV+ +G++ ++ I ++ + +E A K K +
Sbjct: 67 LKTMTDGRFRHMPVLSDGKLRGVITIGDVVHFRLKELEYEALKMKQM 113
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 174 RLSSAVVTVENKP-RGILTSKDILMRVI---SQNLPADSTLVEKVMTPNPECATIDTPIV 229
R+ + VVT +N +GIL+ +DI+ R+ Q LP V +MT + D +
Sbjct: 8 RIGAVVVTDQNGALQGILSERDIVRRMAETPGQTLPQS---VADLMTSEVKTCAPDDLLN 64
Query: 230 DALHIMHDGKFLHLPVVDRDG---DVVDVVDVIHITHAAVATEIL 271
D L M DG+F H+PV+ DG V+ + DV+H + E L
Sbjct: 65 DVLKTMTDGRFRHMPVLS-DGKLRGVITIGDVVHFRLKELEYEAL 108
>gi|442770277|gb|AGC70997.1| CBS domain protein [uncultured bacterium A1Q1_fos_2107]
Length = 145
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 10/106 (9%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRN-----PTFVL 55
+ RR+ AL+++D + GI++++D+ + A + V+ VMTR+ P L
Sbjct: 30 LGTRRIGALVVSDDGRTVDGIVSERDVVAHLAAVGRTGLNSTVATVMTRDVRTCTPGDAL 89
Query: 56 SDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
D +A+ M G+FRHLPVV +GE+ ++ I + ++ +E
Sbjct: 90 EDVMAI-----MTAGRFRHLPVVADGELAGIVSIGDAVERRVSELE 130
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 144 LSTIIPEK-SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVIS 201
+S I+ K + V+T+ P T+ A + R+ + VV+ + + GI++ +D++ + +
Sbjct: 3 VSDILRHKGTDVITVRPETTIENAVGVLGTRRIGALVVSDDGRTVDGIVSERDVVAHLAA 62
Query: 202 QNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
++ V VMT + T + D + IM G+F HLPVV DG++ +V +
Sbjct: 63 VGRTGLNSTVATVMTRDVRTCTPGDALEDVMAIMTAGRFRHLPVV-ADGELAGIVSI 118
>gi|52840978|ref|YP_094777.1| hypothetical protein lpg0741 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52628089|gb|AAU26830.1| hypothetical protein lpg0741 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 174
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + + AL++ D++A L GI++++DI + L+LE VS V+ N T +LS +
Sbjct: 62 MVEKDIGALVVFDNDAHLIGIVSERDILRCYFHKSLSLETAKVSDVVYTNVT-ILSPHDS 120
Query: 61 VE-ALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
VE A+Q + + K RH+ + E GE++A+L I LY + R E
Sbjct: 121 VEKAMQVITETKRRHVLIQEEGELLAILSIGDLLYHVLEDKLRVIE 166
>gi|77165478|ref|YP_344003.1| hypothetical protein Noc_2011 [Nitrosococcus oceani ATCC 19707]
gi|76883792|gb|ABA58473.1| CBS domain containing protein [Nitrosococcus oceani ATCC 19707]
Length = 286
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMTRNP-TFVLSDTLAVEALQKMVQGKFRHLP 76
+ GI+TD+D+A R + +L+ E T +++VMT +P L+D+ EA+ M QG R +P
Sbjct: 43 IVGIVTDRDLAVRALGHKLDPENTAITEVMTPSPLMLTLADSRE-EAIALMQQGNVRRIP 101
Query: 77 VVENGEVIALLDIAKCLYDAIARMERAA 104
+ EN V+ ++ + L D A +E A
Sbjct: 102 LSENNRVVGMVTLDDLLLDEAAPLEELA 129
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 52/99 (52%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL 210
+ ++V +S +VL A + M + + VV + GI+T +D+ +R + L ++T
Sbjct: 8 RPRLVVLSSKSSVLEAARAMENNSIGAIVVQDHGRIVGIVTDRDLAVRALGHKLDPENTA 67
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
+ +VMTP+P T+ +A+ +M G +P+ + +
Sbjct: 68 ITEVMTPSPLMLTLADSREEAIALMQQGNVRRIPLSENN 106
>gi|289626325|ref|ZP_06459279.1| CBS domain-containing protein [Pseudomonas syringae pv. aesculi
str. NCPPB 3681]
gi|422583462|ref|ZP_16658586.1| CBS domain-containing protein [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330868293|gb|EGH03002.1| CBS domain-containing protein [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 146
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + AL + + N ++ G+++++D A +VI + + TPV ++M+ N + +
Sbjct: 34 MAEKNIGALPVVEGN-VMVGVVSERDYARKVILKGRSSVGTPVREIMS-NKVITVDSQQS 91
Query: 61 VEA-LQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
VEA + M RHLPVVE+G+++ LL I + +AIA
Sbjct: 92 VEACMGIMTDSHLRHLPVVEDGQLLGLLSIGDLVKEAIA 130
>gi|333988333|ref|YP_004520940.1| CBS domain-containing membrane protein [Methanobacterium sp.
SWAN-1]
gi|333826477|gb|AEG19139.1| CBS domain containing membrane protein [Methanobacterium sp.
SWAN-1]
Length = 274
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 117/264 (44%), Gaps = 58/264 (21%)
Query: 1 MAARRVDALLLTDSNA----LLCGILTDKDIATRVIA-RELNLEETP--VSKVMTRNPTF 53
M +V L + ++N+ L G+LT+KDIA R+ + R NL + VS VM+ +
Sbjct: 27 MKKHKVSRLPVVNTNSDNVKKLVGMLTEKDIAIRLSSSRYGNLAPSHFHVSTVMSTDLVT 86
Query: 54 VLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113
V S +A + M++ K +PVV++GE++ +L
Sbjct: 87 VESARSIGKAAKSMIENKIGGMPVVDDGEIVGILT------------------------- 121
Query: 114 VEGVEKHWGTSISGPNTFIETLRERMFRPS-LSTIIPEKSKVVTISPTDTVLMATKKMLE 172
FIE + + F + +++ + E VVT+SP D ++ A + +++
Sbjct: 122 --------------KTDFIEICQGKPFNNTDVASRMTED--VVTVSPEDRLVHARRCIID 165
Query: 173 LRLSSAVVTVENKPRGILTSKDILMRVIS---------QNLPADSTLVEKVMTPNPECAT 223
+ V+ N+ GI+T+KDI ++S Q + LV VMT N + T
Sbjct: 166 KEIGRIPVSEGNELEGIVTAKDIANAMVSFRKVVPDKHQAARIRNLLVGDVMTQNLKTIT 225
Query: 224 IDTPIVDALHIMHDGKFLHLPVVD 247
D I +A +M + F +PV D
Sbjct: 226 SDASIEEASQLMLENNFSGIPVSD 249
>gi|170751024|ref|YP_001757284.1| signal-transduction protein [Methylobacterium radiotolerans JCM
2831]
gi|170657546|gb|ACB26601.1| putative signal-transduction protein with CBS domains
[Methylobacterium radiotolerans JCM 2831]
Length = 143
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLE-ETPVSKVMTRNPTFVLSDTL 59
+A +R+ AL++ ++ + GI++++DI R +AR + PVS MT T
Sbjct: 30 LADKRIGALVVAQADGTVAGIISERDI-MRALARHGGSAFDAPVSAHMTAEVTTCGRSAT 88
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
E + M G+FRH+PV E+G +I L+ I + IA +E
Sbjct: 89 IEEVMTLMTDGRFRHVPVCEDGRLIGLVSIGDVVARKIATVE 130
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Query: 143 SLSTIIPEK-SKVVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILMRVI 200
+++ I+ EK S VVT+ P T+ + + + R+ + VV + GI++ +DI+ +
Sbjct: 2 TVARILAEKGSSVVTVGPDKTLDEVIQILADKRIGALVVAQADGTVAGIISERDIMRALA 61
Query: 201 SQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIH 260
A V MT I + + +M DG+F H+PV + DG ++ +V +
Sbjct: 62 RHGGSAFDAPVSAHMTAEVTTCGRSATIEEVMTLMTDGRFRHVPVCE-DGRLIGLVSIGD 120
Query: 261 ITHAAVAT 268
+ +AT
Sbjct: 121 VVARKIAT 128
>gi|167839482|ref|ZP_02466166.1| CBS domain protein [Burkholderia thailandensis MSMB43]
gi|424905115|ref|ZP_18328622.1| CBS domain protein [Burkholderia thailandensis MSMB43]
gi|390929509|gb|EIP86912.1| CBS domain protein [Burkholderia thailandensis MSMB43]
Length = 154
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA R + ALL+ D A + GI+T++D A +V+ + + + T V ++MT +V +
Sbjct: 35 MAERSIGALLVMD-GANIAGIVTERDYARKVVLLDRSSKATRVEEIMTAKVRYVEPTQTS 93
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
E + M + + RHLPV+++G++I L+ I + IA
Sbjct: 94 DECMALMTEHRMRHLPVLDDGKLIGLVSIGDLVKSVIA 131
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 65/129 (50%), Gaps = 3/129 (2%)
Query: 149 PEKSKVV-TISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPAD 207
P+ + + TI +D+V A K M E + + +V GI+T +D +V+ + +
Sbjct: 13 PDSGRTIHTIEKSDSVYNAIKLMAERSIGALLVMDGANIAGIVTERDYARKVVLLDRSSK 72
Query: 208 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
+T VE++MT + + +M + + HLPV+D DG ++ +V + + + +A
Sbjct: 73 ATRVEEIMTAKVRYVEPTQTSDECMALMTEHRMRHLPVLD-DGKLIGLVSIGDLVKSVIA 131
Query: 268 -TEILLDQI 275
+ +DQ+
Sbjct: 132 DQQFTIDQL 140
>gi|254437635|ref|ZP_05051129.1| hypothetical protein OA307_2505 [Octadecabacter antarcticus 307]
gi|198253081|gb|EDY77395.1| hypothetical protein OA307_2505 [Octadecabacter antarcticus 307]
Length = 168
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSA-VVTVENKPRGILTSKDILMRVISQNLPADST 209
K + +T SP ++ A M E + VV + K G++T +D++ ++++ L A T
Sbjct: 9 KQRPLTCSPDTSIFDAVTSMSEKNFGAVIVVDPDKKVLGVVTERDVMNKLVALELDARKT 68
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDV 252
V +MT +P A+ ++D L IM + +F LPVVD +G +
Sbjct: 69 AVSDIMTKDPRVASESDDMLDWLRIMSNERFRRLPVVDDNGQI 111
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 69/126 (54%), Gaps = 14/126 (11%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ + A+++ D + + G++T++D+ +++A EL+ +T VS +MT++P
Sbjct: 28 MSEKNFGAVIVVDPDKKVLGVVTERDVMNKLVALELDARKTAVSDIMTKDPRVASESDDM 87
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALL---DIAKCLY-DAIARMERAAEKGKAIAAAVE 115
++ L+ M +FR LPVV +NG++ A+ D + D + +M K+IA A
Sbjct: 88 LDWLRIMSNERFRRLPVVDDNGQIKAVFTQGDFVSYTWPDLMYQM-------KSIATAT- 139
Query: 116 GVEKHW 121
V K+W
Sbjct: 140 -VTKNW 144
>gi|114766854|ref|ZP_01445781.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Pelagibaca bermudensis HTCC2601]
gi|114540975|gb|EAU44034.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Roseovarius sp. HTCC2601]
Length = 607
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 3/128 (2%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
K +T+ P+ TV A K M E +SS VT + GILT +D+ +V+ LP D+ L +
Sbjct: 151 KPLTLPPSATVQQAAKAMAERHVSSVCVTEGERLLGILTIRDVSGKVVGAGLPFDTPLAQ 210
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITH-AAVATEIL 271
VMT +P D LH+M + H+PV + G +V +V +T AV++ L
Sbjct: 211 -VMTADPMTLPPSAIGSDVLHMMMERNVGHVPVSE-GGRLVGMVTQTDLTRFQAVSSAEL 268
Query: 272 LDQIMRQQ 279
+ +I R +
Sbjct: 269 VAEIARAE 276
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 63/112 (56%), Gaps = 7/112 (6%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA R V ++ +T+ LL GILT +D++ +V+ L + TP+++VMT +P + +
Sbjct: 168 MAERHVSSVCVTEGERLL-GILTIRDVSGKVVGAGLPFD-TPLAQVMTADPMTLPPSAIG 225
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL---DIAKCLYDAIARMERAAEKGKA 109
+ L M++ H+PV E G ++ ++ D+ + + A++ E AE +A
Sbjct: 226 SDVLHMMMERNVGHVPVSEGGRLVGMVTQTDLTR--FQAVSSAELVAEIARA 275
>gi|157374890|ref|YP_001473490.1| cyclic nucleotide-binding protein [Shewanella sediminis HAW-EB3]
gi|157317264|gb|ABV36362.1| cyclic nucleotide-binding protein [Shewanella sediminis HAW-EB3]
Length = 615
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + RV ++L+ D+N L GILTD+D+ RV+A L PV + MT P + S++L
Sbjct: 176 MRSTRVSSVLVIDNNKL-SGILTDRDLRNRVLAEGLE-GSLPVHQAMTTKPKTLTSNSLV 233
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
EA+ M + HLP+V++ + +L
Sbjct: 234 FEAMLLMSEHSIHHLPIVDDERAVGVL 260
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 162 TVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPEC 221
TV A +KM R+SS +V NK GILT +D+ RV+++ L S V + MT P+
Sbjct: 168 TVSDAARKMRSTRVSSVLVIDNNKLSGILTDRDLRNRVLAEGLEG-SLPVHQAMTTKPKT 226
Query: 222 ATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILL-DQIMRQQ 279
T ++ + +A+ +M + HLP+VD D V V+ I + +LL +I RQ
Sbjct: 227 LTSNSLVFEAMLLMSEHSIHHLPIVD-DERAVGVLTSTDILRGQSSQPLLLIGEIERQN 284
>gi|213964753|ref|ZP_03392953.1| cyclic nucleotide-binding protein [Corynebacterium amycolatum SK46]
gi|213952946|gb|EEB64328.1| cyclic nucleotide-binding protein [Corynebacterium amycolatum SK46]
Length = 624
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 1 MAARRVDALLLTDS----NALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLS 56
M R V +LL+ +S + L GI+TD+D+ RV+A E E+ VS+VMT NP +
Sbjct: 177 MTERNVSSLLVMESAGANQSPLVGIITDRDLRRRVLA-EAKPAESLVSEVMTGNPETISP 235
Query: 57 DTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCL 93
D L EA+ M + + HLPV + V+ ++ I L
Sbjct: 236 DLLVFEAMLLMAERGYHHLPVHDGTRVVGMIVIGDLL 272
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 71/138 (51%), Gaps = 8/138 (5%)
Query: 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPE--KSKVVTISPTDTVLMATKKMLELR 174
V +++G + LR SL T + + ++ +VT S TV A + M E
Sbjct: 122 VRRYYGGENARIRAVASKLRSTAASESLRTRVADLMETSLVTCSADATVQEAAQIMTERN 181
Query: 175 LSSAVV----TVENKPR-GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIV 229
+SS +V P GI+T +D+ RV+++ PA+S LV +VMT NPE + D +
Sbjct: 182 VSSLLVMESAGANQSPLVGIITDRDLRRRVLAEAKPAES-LVSEVMTGNPETISPDLLVF 240
Query: 230 DALHIMHDGKFLHLPVVD 247
+A+ +M + + HLPV D
Sbjct: 241 EAMLLMAERGYHHLPVHD 258
>gi|386314130|ref|YP_006010295.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella putrefaciens 200]
gi|319426755|gb|ADV54829.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella putrefaciens 200]
Length = 615
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RV +LL+TD N L GILTDKD+ RV+A L+ V + MT +P + S+ L
Sbjct: 176 MRNARVSSLLVTD-NHKLVGILTDKDLRNRVLAVGLD-GRLAVHQAMTVSPISISSNALI 233
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
EA+ M + HLP+++ G+ I ++
Sbjct: 234 FEAMLLMSEHNIHHLPIIDEGKAIGMV 260
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 5/130 (3%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL- 210
S + I +V A M R+SS +VT +K GILT KD+ RV++ L D L
Sbjct: 158 SDPIMIDAHASVTQAALLMRNARVSSLLVTDNHKLVGILTDKDLRNRVLAVGL--DGRLA 215
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEI 270
V + MT +P + + I +A+ +M + HLP++D +G + +V I + +
Sbjct: 216 VHQAMTVSPISISSNALIFEAMLLMSEHNIHHLPIID-EGKAIGMVTSTDILRGQGSQPL 274
Query: 271 LL-DQIMRQQ 279
LL +I RQQ
Sbjct: 275 LLIGEIERQQ 284
>gi|109896856|ref|YP_660111.1| signal-transduction protein [Pseudoalteromonas atlantica T6c]
gi|109699137|gb|ABG39057.1| putative signal-transduction protein with CBS domains
[Pseudoalteromonas atlantica T6c]
Length = 611
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ V +L++TD N LL GILTD+DI RV+A++ ++ VS++MTR+P +
Sbjct: 174 MSKSGVSSLVITD-NQLLVGILTDRDIRNRVVAQQTDV-NLAVSEIMTRDPVKISDQRTL 231
Query: 61 VEALQKMVQGKFRHLPVVENGEVIAL 86
+AL M + HLPVV+ + L
Sbjct: 232 FDALCVMTEHNVHHLPVVDKNSGVPL 257
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 6/115 (5%)
Query: 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMR 198
+++P +S +I + VV+ ++L + M + +SS V+T GILT +DI R
Sbjct: 146 LYKP-ISEVISDG--VVSEDINSSILQGVQVMSKSGVSSLVITDNQLLVGILTDRDIRNR 202
Query: 199 VISQNLPADSTL-VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDV 252
V++Q D L V ++MT +P + + DAL +M + HLPVVD++ V
Sbjct: 203 VVAQQ--TDVNLAVSEIMTRDPVKISDQRTLFDALCVMTEHNVHHLPVVDKNSGV 255
>gi|260769995|ref|ZP_05878928.1| Signal transduction protein [Vibrio furnissii CIP 102972]
gi|375133344|ref|YP_005049752.1| cyclic nucleotide binding protein/2 CBS domain protein [Vibrio
furnissii NCTC 11218]
gi|260615333|gb|EEX40519.1| Signal transduction protein [Vibrio furnissii CIP 102972]
gi|315182519|gb|ADT89432.1| cyclic nucleotide binding protein/2 CBS domain protein [Vibrio
furnissii NCTC 11218]
Length = 623
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 4 RRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEA 63
RR ++T ++ GI+TD+D+ V+A +++++ P+ +VMT+NP + +D ++A
Sbjct: 188 RRSSCAVITRGGDIV-GIVTDRDMTRSVVASGIDIQQ-PIQRVMTQNPQLIQADDKVIQA 245
Query: 64 LQKMVQGKFRHLPVVENGEVIALL 87
+ M+Q R LPVV +V+ LL
Sbjct: 246 ISIMLQYNIRCLPVVRGNDVVGLL 269
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 174 RLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALH 233
R S AV+T GI+T +D+ V++ + +++VMT NP+ D ++ A+
Sbjct: 189 RSSCAVITRGGDIVGIVTDRDMTRSVVASGIDIQQP-IQRVMTQNPQLIQADDKVIQAIS 247
Query: 234 IMHDGKFLHLPVVDRDGDVVDVVDVIHITH 263
IM LPVV R DVV ++ H+ H
Sbjct: 248 IMLQYNIRCLPVV-RGNDVVGLLTTSHLVH 276
>gi|94967662|ref|YP_589710.1| signal-transduction protein [Candidatus Koribacter versatilis
Ellin345]
gi|94549712|gb|ABF39636.1| putative signal-transduction protein with CBS domains [Candidatus
Koribacter versatilis Ellin345]
Length = 142
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M V A+ + D L+ GI +++D+ TRV+ R ++ T V VMT P V +T
Sbjct: 31 MVENNVGAVPVLDHGHLV-GIFSERDVMTRVVVRGMDPHSTTVETVMTPEPLAVAPETSV 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLY------DAIARMERA 103
+ + M Q KFRHLPV E ++ L + L D RM RA
Sbjct: 90 HDCMVLMKQHKFRHLPVCEGRRLVGFLSLRDLLLYEVDEKDVEVRMMRA 138
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%)
Query: 162 TVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPEC 221
+V+ A M+E + + V GI + +D++ RV+ + + ST VE VMTP P
Sbjct: 23 SVIEAVHFMVENNVGAVPVLDHGHLVGIFSERDVMTRVVVRGMDPHSTTVETVMTPEPLA 82
Query: 222 ATIDTPIVDALHIMHDGKFLHLPVVD 247
+T + D + +M KF HLPV +
Sbjct: 83 VAPETSVHDCMVLMKQHKFRHLPVCE 108
>gi|347523925|ref|YP_004781495.1| putative signal transduction protein with CBS domains [Pyrolobus
fumarii 1A]
gi|343460807|gb|AEM39243.1| putative signal transduction protein with CBS domains [Pyrolobus
fumarii 1A]
Length = 143
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Query: 155 VTISPTDTVLMATKKMLELRLSSA-VVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
VT+ ++ A +KM E R+ S VV E K GI+T +DIL V+ + V
Sbjct: 21 VTVHRDVSIEEAARKMYENRIGSVLVVDEEGKLVGIVTERDILYAVVKGKV-GRGLPVWD 79
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVV------DVVD 257
+MT NP A D P+++A+ M + HLPVVD +G V DVVD
Sbjct: 80 IMTDNPITAKPDEPLIEAIERMREANVRHLPVVDEEGKPVGMLSLRDVVD 129
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M R+ ++L+ D L GI+T++DI V+ ++ PV +MT NP D
Sbjct: 36 MYENRIGSVLVVDEEGKLVGIVTERDILYAVVKGKVG-RGLPVWDIMTDNPITAKPDEPL 94
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDI 89
+EA+++M + RHLPVV E G+ + +L +
Sbjct: 95 IEAIERMREANVRHLPVVDEEGKPVGMLSL 124
>gi|120598469|ref|YP_963043.1| cyclic nucleotide-binding protein [Shewanella sp. W3-18-1]
gi|120558562|gb|ABM24489.1| cyclic nucleotide-binding protein [Shewanella sp. W3-18-1]
Length = 615
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RV +LL+TD N L GILTDKD+ RV+A L+ V + MT +P + S+ L
Sbjct: 176 MRNARVSSLLVTD-NHKLVGILTDKDLRNRVLAVGLD-GRLAVHQAMTVSPISISSNALI 233
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
EA+ M + HLP+++ G+ I ++
Sbjct: 234 FEAMLLMSEHNIHHLPIIDEGKAIGMV 260
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 5/130 (3%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL- 210
S + I +V A M R+SS +VT +K GILT KD+ RV++ L D L
Sbjct: 158 SDPIMIDAHASVTQAALLMRNARVSSLLVTDNHKLVGILTDKDLRNRVLAVGL--DGRLA 215
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEI 270
V + MT +P + + I +A+ +M + HLP++D +G + +V I + +
Sbjct: 216 VHQAMTVSPISISSNALIFEAMLLMSEHNIHHLPIID-EGKAIGMVTSTDILRGQGSQPL 274
Query: 271 LL-DQIMRQQ 279
LL +I RQQ
Sbjct: 275 LLIGEIERQQ 284
>gi|146293453|ref|YP_001183877.1| cyclic nucleotide-binding protein [Shewanella putrefaciens CN-32]
gi|145565143|gb|ABP76078.1| cyclic nucleotide-binding protein [Shewanella putrefaciens CN-32]
Length = 615
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RV +LL+TD N L GILTDKD+ RV+A L+ V + MT +P + S+ L
Sbjct: 176 MRNARVSSLLVTD-NHKLVGILTDKDLRNRVLAVGLD-GRLAVHQAMTVSPISISSNALI 233
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
EA+ M + HLP+++ G+ I ++
Sbjct: 234 FEAMLLMSEHNIHHLPIIDEGKAIGMV 260
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 5/130 (3%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL- 210
S + I +V A M R+SS +VT +K GILT KD+ RV++ L D L
Sbjct: 158 SDPIMIDAHASVTQAALLMRNARVSSLLVTDNHKLVGILTDKDLRNRVLAVGL--DGRLA 215
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEI 270
V + MT +P + + I +A+ +M + HLP++D +G + +V I + +
Sbjct: 216 VHQAMTVSPISISSNALIFEAMLLMSEHNIHHLPIID-EGKAIGMVTSTDILRGQGSQPL 274
Query: 271 LL-DQIMRQQ 279
LL +I RQQ
Sbjct: 275 LLIGEIERQQ 284
>gi|170727179|ref|YP_001761205.1| hypothetical protein Swoo_2835 [Shewanella woodyi ATCC 51908]
gi|169812526|gb|ACA87110.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella woodyi ATCC 51908]
Length = 615
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RV ++L+ D N LCGILTD+D+ RV+A E PV + MT P + S+ L
Sbjct: 176 MREARVSSVLVID-NHKLCGILTDRDLRNRVLA-EGQDGSLPVHQAMTTQPKVLSSNALV 233
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
EA+ M + HLP+V++ + +L
Sbjct: 234 FEAMLLMSEHGIHHLPIVDDERAVGVL 260
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 5/117 (4%)
Query: 166 ATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL-VEKVMTPNPECATI 224
A KKM E R+SS +V +K GILT +D+ RV+++ D +L V + MT P+ +
Sbjct: 172 AAKKMREARVSSVLVIDNHKLCGILTDRDLRNRVLAEG--QDGSLPVHQAMTTQPKVLSS 229
Query: 225 DTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILL-DQIMRQQA 280
+ + +A+ +M + HLP+VD D V V+ I + +LL +I RQ +
Sbjct: 230 NALVFEAMLLMSEHGIHHLPIVD-DERAVGVLTSTDILRGQSSQPLLLIGEIERQNS 285
>gi|410627065|ref|ZP_11337811.1| CBS domain-containing protein [Glaciecola mesophila KMM 241]
gi|410153444|dbj|GAC24580.1| CBS domain-containing protein [Glaciecola mesophila KMM 241]
Length = 611
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ V +L++TD N LL GILTD+DI RV+A++ ++ VS++MTR+P +
Sbjct: 174 MSKSGVSSLVITD-NQLLVGILTDRDIRNRVVAQQTDV-NLAVSEIMTRDPVKISDQRTL 231
Query: 61 VEALQKMVQGKFRHLPVVENGEVIAL 86
+AL M + HLPVV+ + L
Sbjct: 232 FDALCVMTEHNVHHLPVVDKSSGVPL 257
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMR 198
+++P +S +I + +V+ ++L + M + +SS V+T GILT +DI R
Sbjct: 146 LYKP-ISEVISDG--IVSEDINSSILQGVQVMSKSGVSSLVITDNQLLVGILTDRDIRNR 202
Query: 199 VISQNLPADSTL-VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDV 252
V++Q D L V ++MT +P + + DAL +M + HLPVVD+ V
Sbjct: 203 VVAQQ--TDVNLAVSEIMTRDPVKISDQRTLFDALCVMTEHNVHHLPVVDKSSGV 255
>gi|328543257|ref|YP_004303366.1| inosine-5'-monophosphate dehydrogenase [Polymorphum gilvum
SL003B-26A1]
gi|326413003|gb|ADZ70066.1| Inosine-5prime-monophosphate dehydrogenase protein [Polymorphum
gilvum SL003B-26A1]
Length = 143
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARE-LNLEETPVSKVMTRNPTFVLSDTL 59
+A + + A+++TD + GI++++DI R+I R + + PV MTR +
Sbjct: 30 LAEKGIGAIVVTDDKGHIEGIVSERDI-VRMIGRSGAGILDLPVGDGMTRAVVTCREEDS 88
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEK 106
+ +M G+FRH+PVV G++ L+ I + IA++E+ AE+
Sbjct: 89 INAVMARMSSGRFRHIPVVAEGKLAGLISIGDVVKHRIAQVEQEAEQ 135
>gi|86749274|ref|YP_485770.1| signal-transduction protein [Rhodopseudomonas palustris HaA2]
gi|86572302|gb|ABD06859.1| putative signal-transduction protein with CBS domains
[Rhodopseudomonas palustris HaA2]
Length = 142
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNP-TFVLSDTL 59
+A RRV A+L+ A L GIL+++DI + R + + PV VMTR T DT+
Sbjct: 30 LAERRVGAVLVM-RGARLDGILSERDIVKVLADRGADALDGPVHAVMTREVVTCAQGDTV 88
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIA 90
E ++ M KFRHLPV+EN V+ L+ I
Sbjct: 89 G-EIMEVMTSQKFRHLPVLENERVVGLISIG 118
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 143 SLSTIIPEKSKVV-TISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVIS 201
++ I+ K + + ++ P + + A + + E R+ + +V + GIL+ +DI+ +
Sbjct: 2 TVRAILEAKGRYIYSVEPDERLSAAIRTLAERRVGAVLVMRGARLDGILSERDIVKVLAD 61
Query: 202 QNLPADSTLVEKVMTPNP-ECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
+ A V VMT CA DT + + + +M KF HLPV++ +
Sbjct: 62 RGADALDGPVHAVMTREVVTCAQGDT-VGEIMEVMTSQKFRHLPVLENE 109
>gi|351729267|ref|ZP_08946958.1| signal-transduction protein [Acidovorax radicis N35]
Length = 145
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL + ++ GI T++D A ++ T V VMT + FV D +
Sbjct: 32 MADKGIGALLAVEGESI-AGIFTERDYARKIALMGRTSAVTQVRDVMTTSVLFVRPDQTS 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEK 106
+ +Q M + RHLPVVE G+++ ++ I + D I+ + E+
Sbjct: 91 EQCMQIMSNNRLRHLPVVEGGKLVGMISIGDLVKDIISEQKFIIEQ 136
>gi|220932726|ref|YP_002509634.1| KpsF/GutQ family protein [Halothermothrix orenii H 168]
gi|219994036|gb|ACL70639.1| KpsF/GutQ family protein [Halothermothrix orenii H 168]
Length = 331
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M A ++ + + D L GI+TD DI R++ + + PV +VMT++P + D LA
Sbjct: 235 MTASKMGSTSVVDERGRLVGIITDGDI-RRLLEESTDFLQKPVLEVMTKDPITIEKDRLA 293
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCL 93
EAL+ M + LPVVE+G+ + +L+ L
Sbjct: 294 AEALKIMEDKEVNDLPVVEDGKPVGMLNFQDLL 326
>gi|224062121|ref|XP_002300765.1| predicted protein [Populus trichocarpa]
gi|222842491|gb|EEE80038.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 160 TDTVLMATKKMLELRLSSAVVTVENK-PRGILTSKDILMRVISQNLPADSTLVEKVMTPN 218
TDTV A K M + + S VV E + GI+T +D L ++I+Q + T V ++MT
Sbjct: 78 TDTVYDAVKNMAQNNIGSLVVLGERELIAGIITERDYLRKIIAQGRSSKYTRVGEIMTDE 137
Query: 219 PECATI--DTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
+ T+ DT I+ A+ +M D H+PV+ DG + +V ++ + A V +
Sbjct: 138 NKLITVASDTNILQAMKLMTDNHIRHVPVI--DGTIAGMVSMVDVVRAVVEQQ 188
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 64/117 (54%), Gaps = 5/117 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTF--VLSDT 58
MA + +L++ L+ GI+T++D ++IA+ + + T V ++MT V SDT
Sbjct: 88 MAQNNIGSLVVLGERELIAGIITERDYLRKIIAQGRSSKYTRVGEIMTDENKLITVASDT 147
Query: 59 LAVEALQKMVQGKFRHLPVVEN--GEVIALLDIAKCLYDAIAR-MERAAEKGKAIAA 112
++A++ M RH+PV++ +++++D+ + + + R ++R E K I +
Sbjct: 148 NILQAMKLMTDNHIRHVPVIDGTIAGMVSMVDVVRAVVEQQGRELKRLNEFIKGIES 204
>gi|167589794|ref|ZP_02382182.1| putative signal-transduction protein with CBS domains [Burkholderia
ubonensis Bu]
Length = 153
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+ D + + GI+T++D A +++ ++ + + T V ++MT +V +
Sbjct: 35 MAEKGIGALLVMDGDDI-SGIVTERDYARKIVLQDRSSKATRVEEIMTSKVRYVEPSQSS 93
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
E + M + + RHLPV+++G++I L+ I + IA
Sbjct: 94 DECMALMTEHRMRHLPVLDDGKLIGLISIGDLVKSVIA 131
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Query: 149 PEKSK-VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPAD 207
PE + V T+ TD V A K M E + + +V + GI+T +D +++ Q+ +
Sbjct: 13 PESGRTVYTVRKTDLVYDAIKLMAEKGIGALLVMDGDDISGIVTERDYARKIVLQDRSSK 72
Query: 208 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
+T VE++MT + + +M + + HLPV+D DG ++ ++ + + + +A
Sbjct: 73 ATRVEEIMTSKVRYVEPSQSSDECMALMTEHRMRHLPVLD-DGKLIGLISIGDLVKSVIA 131
Query: 268 TE 269
+
Sbjct: 132 DQ 133
>gi|291440295|ref|ZP_06579685.1| CBS domain-containing protein [Streptomyces ghanaensis ATCC 14672]
gi|291343190|gb|EFE70146.1| CBS domain-containing protein [Streptomyces ghanaensis ATCC 14672]
Length = 157
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 6 VDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQ 65
V AL ++D+N LCGILTD+DI +A + + P ++ +D E LQ
Sbjct: 48 VGALPISDANERLCGILTDRDIVVGCVAVGHDPARVTAGDMAQGTPRWIEADADISEVLQ 107
Query: 66 KMVQGKFRHLPVVENGEVIALL---DIAKCLYD 95
+M + R LPV++N ++ ++ D+A+ L D
Sbjct: 108 EMQTHRIRRLPVIQNKRLVGMISEADLARHLSD 140
>gi|86138128|ref|ZP_01056703.1| CBS domain protein [Roseobacter sp. MED193]
gi|85825155|gb|EAQ45355.1| CBS domain protein [Roseobacter sp. MED193]
Length = 173
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 24/113 (21%)
Query: 4 RRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETP------------VSKVMTRNP 51
RR+ ALL+T L GIL+++DI + L ETP SKV T +P
Sbjct: 64 RRIGALLVTGEGGALEGILSERDIVRK-------LAETPGQTLPQTVGENMTSKVETCSP 116
Query: 52 TFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAA 104
SD L V L++M +G+FRH+PVV++G++ +L I + + +E A
Sbjct: 117 ----SDPL-VAVLRRMNEGRFRHMPVVDDGKLCGMLTIGDVVNYRLNELEYEA 164
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Query: 156 TISPTDTVLMATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVI---SQNLPADSTLV 211
TI+ +DT+ A + + R+ + +VT E GIL+ +DI+ ++ Q LP V
Sbjct: 47 TITSSDTLSTAVTVLRDRRIGALLVTGEGGALEGILSERDIVRKLAETPGQTLPQ---TV 103
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+ MT E + P+V L M++G+F H+PVVD DG + ++ +
Sbjct: 104 GENMTSKVETCSPSDPLVAVLRRMNEGRFRHMPVVD-DGKLCGMLTI 149
>gi|408674029|ref|YP_006873777.1| putative signal transduction protein with CBS domains [Emticicia
oligotrophica DSM 17448]
gi|387855653|gb|AFK03750.1| putative signal transduction protein with CBS domains [Emticicia
oligotrophica DSM 17448]
Length = 145
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNP-TFVLSDTL 59
MA + + A+L+ D L GI +++D A +++ + + ++TPVS VMT N T + D L
Sbjct: 31 MADKNIGAVLVIDEGKL-SGIFSERDYARKIVLKGRHSDDTPVSDVMTANVITVEMEDKL 89
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDI 89
+ A+Q M + RHLPV+EN ++ ++ I
Sbjct: 90 EM-AMQIMSEKHIRHLPVMENAILVGIISI 118
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 47/92 (51%)
Query: 156 TISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVM 215
+++ + TV A +M + + + +V E K GI + +D +++ + +D T V VM
Sbjct: 17 SVTSSTTVYDALVEMADKNIGAVLVIDEGKLSGIFSERDYARKIVLKGRHSDDTPVSDVM 76
Query: 216 TPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
T N ++ + A+ IM + HLPV++
Sbjct: 77 TANVITVEMEDKLEMAMQIMSEKHIRHLPVME 108
>gi|254450613|ref|ZP_05064050.1| CBS domain pair protein [Octadecabacter arcticus 238]
gi|198265019|gb|EDY89289.1| CBS domain pair protein [Octadecabacter arcticus 238]
Length = 141
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 76/140 (54%), Gaps = 14/140 (10%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ + A+++ D++ + G+ T++D+ +++A+EL+ +T VS++MT++P
Sbjct: 1 MSEKNYGAVVVIDADKKVLGVATERDVMNKLVAQELDARKTAVSEIMTKDPRVARETDNM 60
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALL---DIAKCLY-DAIARMERAAEKGKAIAAAVE 115
++ L+ M +FR LPVV +NG++ A+ D + D + +M K+IA A
Sbjct: 61 LDWLRIMSNERFRRLPVVDDNGQIKAVFTQGDFVSYTWPDLMYQM-------KSIATAT- 112
Query: 116 GVEKHWGTSISGPNTFIETL 135
V K+W + G + +L
Sbjct: 113 -VTKNWPFFLIGGGVALYSL 131
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%)
Query: 179 VVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDG 238
V+ + K G+ T +D++ ++++Q L A T V ++MT +P A ++D L IM +
Sbjct: 11 VIDADKKVLGVATERDVMNKLVAQELDARKTAVSEIMTKDPRVARETDNMLDWLRIMSNE 70
Query: 239 KFLHLPVVDRDGDV 252
+F LPVVD +G +
Sbjct: 71 RFRRLPVVDDNGQI 84
>gi|448312966|ref|ZP_21502698.1| signal transduction protein with CBS domains [Natronolimnobius
innermongolicus JCM 12255]
gi|445599812|gb|ELY53836.1| signal transduction protein with CBS domains [Natronolimnobius
innermongolicus JCM 12255]
Length = 134
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 166 ATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATI 224
A ML+ + S VVT EN GILT+ D +R++++ P D T VE+ M+ + +
Sbjct: 26 AAGSMLDNEIGSVVVTDENNHLEGILTTTD-FVRIVAERKPKDQTPVERYMSEDVITVSA 84
Query: 225 DTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
I DA +M D F HLPVVD D V+ ++
Sbjct: 85 QDGIRDAADVMVDHGFHHLPVVDEDEGVIGMI 116
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + ++++TD N L GILT D R++A ++TPV + M+ + V +
Sbjct: 30 MLDNEIGSVVVTDENNHLEGILTTTDFV-RIVAERKPKDQTPVERYMSEDVITVSAQDGI 88
Query: 61 VEALQKMVQGKFRHLPVVENGE-VIALL---DIAKCL 93
+A MV F HLPVV+ E VI ++ D+A L
Sbjct: 89 RDAADVMVDHGFHHLPVVDEDEGVIGMITTSDLASYL 125
>gi|148261862|ref|YP_001235989.1| signal-transduction protein [Acidiphilium cryptum JF-5]
gi|326405367|ref|YP_004285449.1| hypothetical protein ACMV_32200 [Acidiphilium multivorum AIU301]
gi|146403543|gb|ABQ32070.1| putative signal-transduction protein with CBS domains [Acidiphilium
cryptum JF-5]
gi|325052229|dbj|BAJ82567.1| hypothetical protein ACMV_32200 [Acidiphilium multivorum AIU301]
Length = 145
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 54/97 (55%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A +R+ A+++ N+ L GIL+++D+ + A E S++MTR PT T
Sbjct: 31 LAEKRIGAVVVQSPNSDLLGILSERDVVRSLAANGAATLEMEASQLMTRAPTTATPSTTV 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAI 97
EA M G+FRHLP+V+ G+++ ++ I + I
Sbjct: 91 FEAENLMTDGRFRHLPIVDGGKLVGVVSIGDVVKSLI 127
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 170 MLELRLSSAVVTVENKPR-GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPI 228
+ E R+ + VV N GIL+ +D++ + + ++MT P AT T +
Sbjct: 31 LAEKRIGAVVVQSPNSDLLGILSERDVVRSLAANGAATLEMEASQLMTRAPTTATPSTTV 90
Query: 229 VDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
+A ++M DG+F HLP+VD G +V VV + + + + T+
Sbjct: 91 FEAENLMTDGRFRHLPIVD-GGKLVGVVSIGDVVKSLIETQ 130
>gi|376293124|ref|YP_005164798.1| hypothetical protein CDHC02_1015 [Corynebacterium diphtheriae HC02]
gi|372110447|gb|AEX76507.1| CBS domain-containing protein [Corynebacterium diphtheriae HC02]
Length = 428
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 15 NALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRH 74
A + GI+ D+D ++V+ + L++E PVS+VM++ P V DT A AL M + F H
Sbjct: 184 GATVVGIVMDRDFRSKVVGKALSVEH-PVSEVMSQEPVIVYPDTPASHALLLMTEHGFHH 242
Query: 75 LPVVE 79
LPVVE
Sbjct: 243 LPVVE 247
>gi|433775569|ref|YP_007306036.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mesorhizobium australicum WSM2073]
gi|433667584|gb|AGB46660.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mesorhizobium australicum WSM2073]
Length = 143
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLE-ETPVSKVMTRNPTFVLSDTL 59
+A R+ AL++T+ + + GIL+++DI RV+ARE + V MT +
Sbjct: 30 LAEHRIGALVITNGDRKIVGILSERDI-VRVVAREGGAALDIAVRSAMTPKVKICNENHT 88
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAA 112
E ++ M +G+FRHLPV ++G + ++ I + I +ER AE+ +A A
Sbjct: 89 VNEVMEIMTRGRFRHLPVEKDGLLDGIVSIGDVVKRRIEDVEREAEEIRAYIA 141
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 143 SLSTIIPEKSK-VVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILMRVI 200
++ I+ +K V+T+ P + + A + + E R+ + V+T + K GIL+ +DI+ V
Sbjct: 2 TVKAILEQKGHDVLTLGPNEKLSEAIRILAEHRIGALVITNGDRKIVGILSERDIVRVVA 61
Query: 201 SQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG---DVVDVVD 257
+ A V MTP + + + + + IM G+F HLP V++DG +V + D
Sbjct: 62 REGGAALDIAVRSAMTPKVKICNENHTVNEVMEIMTRGRFRHLP-VEKDGLLDGIVSIGD 120
Query: 258 VI 259
V+
Sbjct: 121 VV 122
>gi|347822266|ref|ZP_08875700.1| signal-transduction protein [Verminephrobacter aporrectodeae subsp.
tuberculatae At4]
Length = 147
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+T+ +A++ GILT++D + +++ T V MT FV S +
Sbjct: 32 MAEKGIGALLVTEGDAIV-GILTERDYSRKIVLMGRTSAATLVRDAMTTPVMFVRSSQTS 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEK 106
+ +Q M + RHLPVV++G+++ ++ I + + I+ + E+
Sbjct: 91 EQCMQLMTTNRVRHLPVVDDGKLVGMVSIGDLVKNIISEQKFIIEQ 136
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 156 TISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVM 215
TI+PT +V A ++M E + + +VT + GILT +D +++ + +TLV M
Sbjct: 18 TIAPTASVFDALERMAEKGIGALLVTEGDAIVGILTERDYSRKIVLMGRTSAATLVRDAM 77
Query: 216 TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
T + +M + HLPVVD DG +V +V +
Sbjct: 78 TTPVMFVRSSQTSEQCMQLMTTNRVRHLPVVD-DGKLVGMVSI 119
>gi|27367316|ref|NP_762843.1| signal transduction protein [Vibrio vulnificus CMCP6]
gi|27358885|gb|AAO07833.1| Predicted signal-transduction protein containing cAMP-binding and
CBS domains [Vibrio vulnificus CMCP6]
Length = 621
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 4 RRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEA 63
+R ++ D N ++ G++TD+D+ V+A+E ++ E + VMT NP + SD ++A
Sbjct: 186 QRSSCAVVMDGNDIV-GLVTDRDMTASVVAKEKDVSER-IESVMTLNPVLIESDAKVIQA 243
Query: 64 LQKMVQGKFRHLPVVENGEVIALL 87
+ M+Q R LPVV +G+V LL
Sbjct: 244 ISLMLQYNIRCLPVVNHGKVAGLL 267
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 7/140 (5%)
Query: 126 SGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPT--DTVLMATKKMLELRLSSAVVTVE 183
S N + + +F ++ I E +V ++ + D L K R S AVV
Sbjct: 140 SAVNFVCQKEEKGLFFRTVGEIASENIAIVKVTDSIRDVALAMCGKQ---RSSCAVVMDG 196
Query: 184 NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHL 243
N G++T +D+ V+++ S +E VMT NP D ++ A+ +M L
Sbjct: 197 NDIVGLVTDRDMTASVVAKEKDV-SERIESVMTLNPVLIESDAKVIQAISLMLQYNIRCL 255
Query: 244 PVVDRDGDVVDVVDVIHITH 263
PVV+ G V ++ H+ H
Sbjct: 256 PVVNH-GKVAGLLTTTHLVH 274
>gi|302348349|ref|YP_003815987.1| signal-transduction protein with CBS domains [Acidilobus
saccharovorans 345-15]
gi|302328761|gb|ADL18956.1| Putative signal-transduction protein with CBS domains [Acidilobus
saccharovorans 345-15]
Length = 141
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 7/121 (5%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTV--ENKPRGILTSKDILMRVISQNLPADSTL 210
K V + D L +++ + + +VV V E K GI T +D L RV++ + DS L
Sbjct: 17 KNVVSATADATLAEAARLMYTKGTGSVVVVSPEGKVIGIFTERD-LSRVVADRVSYDSKL 75
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV---DVIHITHAAVA 267
+ +MT +P D PI A+ ++ K HLPVVDR+G +V ++ D++ IT +A
Sbjct: 76 GD-LMTKDPVTIRDDEPITKAVELLSTRKIRHLPVVDREGKLVGIITARDIVDITERYLA 134
Query: 268 T 268
+
Sbjct: 135 S 135
Score = 37.0 bits (84), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + ++++ + GI T++D++ RV+A ++ + + + +MT++P + D
Sbjct: 35 MYTKGTGSVVVVSPEGKVIGIFTERDLS-RVVADRVSYD-SKLGDLMTKDPVTIRDDEPI 92
Query: 61 VEALQKMVQGKFRHLPVVE-NGEVIALL 87
+A++ + K RHLPVV+ G+++ ++
Sbjct: 93 TKAVELLSTRKIRHLPVVDREGKLVGII 120
>gi|291614479|ref|YP_003524636.1| CBS domain containing protein [Sideroxydans lithotrophicus ES-1]
gi|291584591|gb|ADE12249.1| CBS domain containing protein [Sideroxydans lithotrophicus ES-1]
Length = 143
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 143 SLSTIIPEKSK-VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVIS 201
+++ I+ EK+K + T+SP DTV A M E + + +V + K G+ T +D L +V S
Sbjct: 3 TIAQILAEKTKPLTTVSPDDTVHYALVLMRERDIGAVMVVEQGKLIGVFTERDCLHKVSS 62
Query: 202 QNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHI 261
L LV +VM+ T + L +M + F HLPV+D +++ +V + +
Sbjct: 63 LCLNPKEVLVREVMSTKVRYVTTAMGVSQCLALMTERFFRHLPVLDDQKNILGIVSIGDL 122
Query: 262 THAAVA-TEILLDQIMR 277
A ++ + +++Q+ R
Sbjct: 123 VKARLSDQDFIIEQMER 139
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M R + A+++ + L+ G+ T++D +V + LN +E V +VM+ +V +
Sbjct: 31 MRERDIGAVMVVEQGKLI-GVFTERDCLHKVSSLCLNPKEVLVREVMSTKVRYVTTAMGV 89
Query: 61 VEALQKMVQGKFRHLPVVENGE----VIALLDIAKC-LYDA---IARMER 102
+ L M + FRHLPV+++ + ++++ D+ K L D I +MER
Sbjct: 90 SQCLALMTERFFRHLPVLDDQKNILGIVSIGDLVKARLSDQDFIIEQMER 139
>gi|114777295|ref|ZP_01452306.1| CBS [Mariprofundus ferrooxydans PV-1]
gi|114552440|gb|EAU54923.1| CBS [Mariprofundus ferrooxydans PV-1]
Length = 139
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL 210
K V TI TVL A K M E + S V+T ++ GI T ++++MRV+ ++ D+
Sbjct: 8 KKTVATIDEHHTVLEAAKLMTENYIGSVVITSHSRIVGIFTERELMMRVVGKDRNPDTVK 67
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
++ VM + + D +ALHIM + HL V D D
Sbjct: 68 IKDVMHTDHLKISSDASCEEALHIMETKRCRHLLVFDGD 106
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + ++++T S++ + GI T++++ RV+ ++ N + + VM + + SD
Sbjct: 27 MTENYIGSVVIT-SHSRIVGIFTERELMMRVVGKDRNPDTVKIKDVMHTDHLKISSDASC 85
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDI 89
EAL M + RHL V + E I L+ +
Sbjct: 86 EEALHIMETKRCRHLLVFDGDEFIGLISL 114
>gi|320159155|ref|YP_004191533.1| signal-transduction protein containing cAMP-binding and CBS domains
[Vibrio vulnificus MO6-24/O]
gi|319934467|gb|ADV89330.1| predicted signal-transduction protein containing cAMP-binding and
CBS domains [Vibrio vulnificus MO6-24/O]
Length = 621
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 4 RRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEA 63
+R ++ D N ++ G++TD+D+ V+A+E ++ E + VMT NP + SD ++A
Sbjct: 186 QRSSCAVVMDGNDIV-GLVTDRDMTASVVAKEKDVSER-IESVMTLNPVLIESDAKVIQA 243
Query: 64 LQKMVQGKFRHLPVVENGEVIALL 87
+ M+Q R LPVV +G+V LL
Sbjct: 244 ISLMLQYNIRCLPVVNHGKVAGLL 267
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 5/109 (4%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKV 214
VT S D L K R S AVV N G++T +D+ V+++ S +E V
Sbjct: 171 VTDSIRDVALAMCGKQ---RSSCAVVMDGNDIVGLVTDRDMTASVVAKEKDV-SERIESV 226
Query: 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITH 263
MT NP D ++ A+ +M LPVV+ G V ++ H+ H
Sbjct: 227 MTLNPVLIESDAKVIQAISLMLQYNIRCLPVVNH-GKVAGLLTTTHLVH 274
>gi|289664279|ref|ZP_06485860.1| hypothetical protein XcampvN_14738 [Xanthomonas campestris pv.
vasculorum NCPPB 702]
gi|289667405|ref|ZP_06488480.1| hypothetical protein XcampmN_02517 [Xanthomonas campestris pv.
musacearum NCPPB 4381]
Length = 198
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + A+L+ D LL GI++++D A +V+ R+ T V+ +M+ V
Sbjct: 8 MAEKAIGAVLVMDGPRLL-GIVSERDYARKVVLRDRASSTTSVAGIMSAEVVTVSPSDTV 66
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIA 90
+Q M G+FRHLPVVEN V L+ I
Sbjct: 67 ERCMQLMSDGRFRHLPVVENSRVQGLISIG 96
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 178 AVVTVENKPR--GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIM 235
V V + PR GI++ +D +V+ ++ + +T V +M+ + + + +M
Sbjct: 14 GAVLVMDGPRLLGIVSERDYARKVVLRDRASSTTSVAGIMSAEVVTVSPSDTVERCMQLM 73
Query: 236 HDGKFLHLPVVD 247
DG+F HLPVV+
Sbjct: 74 SDGRFRHLPVVE 85
>gi|384918358|ref|ZP_10018440.1| CBS domain-containing protein [Citreicella sp. 357]
gi|384467843|gb|EIE52306.1| CBS domain-containing protein [Citreicella sp. 357]
Length = 144
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A RR+ +++++ GIL+++DI R+ A + V +MT++
Sbjct: 31 LAERRIGGVVVSEDGQTPLGILSERDIVRRLAAEGAAVLGMAVEDLMTKDLKTCSCKDDC 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIAR--MERAAEKG 107
E L +M +G+FRH+PVVE+G ++ ++ I + IA ME+ A +G
Sbjct: 91 DEVLARMTEGRFRHMPVVEDGVMVGIITIGDVVAAQIAELSMEKHALQG 139
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENK-PRGILTSKDILMRVISQNLPADSTLVE 212
VVT+ TV + + E R+ VV+ + + P GIL+ +DI+ R+ ++ VE
Sbjct: 15 VVTVGLKATVAETAQLLAERRIGGVVVSEDGQTPLGILSERDIVRRLAAEGAAVLGMAVE 74
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
+MT + + + + L M +G+F H+PVV+ DG +V ++ + + A +A
Sbjct: 75 DLMTKDLKTCSCKDDCDEVLARMTEGRFRHMPVVE-DGVMVGIITIGDVVAAQIA 128
>gi|313673776|ref|YP_004051887.1| CBS domain-containing membrane protein [Calditerrivibrio
nitroreducens DSM 19672]
gi|312940532|gb|ADR19724.1| CBS domain containing membrane protein [Calditerrivibrio
nitroreducens DSM 19672]
Length = 222
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 61/120 (50%), Gaps = 11/120 (9%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQ--------- 202
++++TI P DTVL A M E +L V K GI+T KDI S+
Sbjct: 9 TELITIEPDDTVLDALHVMRENKLRRIPVAKGKKLLGIITEKDIKTFSPSKASTLDIYEM 68
Query: 203 -NLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHI 261
N+ AD TLV+ VMT NP D PI A I+ D + LPVVD G++V ++ I +
Sbjct: 69 HNILAD-TLVKDVMTKNPINVAPDDPIEKAALILRDKRIGGLPVVDEKGELVGIITAIDV 127
>gi|284176977|gb|ADB81392.1| putative CBS domain protein [Pseudomonas sp. 1-7]
Length = 146
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + AL + + N + G+++++D A +V+ + + TPV +M +P +S L
Sbjct: 34 MADKNIGALAVVE-NGQVVGVVSERDYARKVVLKGRSSVGTPVRDIMN-SPVITVSANLC 91
Query: 61 VE-ALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDA 96
VE + M + RHLPVVE+GE+I LL I + +A
Sbjct: 92 VEHCMTIMTESHLRHLPVVEDGELIGLLSIGDLVKEA 128
>gi|448823422|ref|YP_007416587.1| hypothetical protein CU7111_0750 [Corynebacterium urealyticum DSM
7111]
gi|448276919|gb|AGE36343.1| hypothetical protein CU7111_0750 [Corynebacterium urealyticum DSM
7111]
Length = 620
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M V +LL+ D L GI+TD+D+ R +A E++ ++PVS+ MT NP + SD L
Sbjct: 181 MGEFNVSSLLVIDDRELR-GIITDRDM-RRSVAAEIS-GDSPVSEAMTANPISLGSDALV 237
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCL 93
EA+ M + H+PVV++G+V+ ++ A +
Sbjct: 238 FEAMLLMAERGIHHIPVVDDGKVMGIIAAADIM 270
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Query: 158 SPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP 217
S T+ A +M E +SS +V + + RGI+T +D + R ++ + DS V + MT
Sbjct: 169 SSQTTLRDAAIRMGEFNVSSLLVIDDRELRGIITDRD-MRRSVAAEISGDSP-VSEAMTA 226
Query: 218 NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILLD-QIM 276
NP D + +A+ +M + H+PVVD DG V+ ++ I + + L Q+
Sbjct: 227 NPISLGSDALVFEAMLLMAERGIHHIPVVD-DGKVMGIIAAADIMRLMQSDPLYLSGQLA 285
Query: 277 RQ 278
RQ
Sbjct: 286 RQ 287
>gi|338989098|ref|ZP_08633977.1| Signal-transduction protein [Acidiphilium sp. PM]
gi|338205963|gb|EGO94220.1| Signal-transduction protein [Acidiphilium sp. PM]
Length = 142
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 54/97 (55%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A +R+ A+++ N+ L GIL+++D+ + A E S++MTR PT T
Sbjct: 28 LAEKRIGAVVVQSPNSDLLGILSERDVVRSLAANGAATLEMEASQLMTRAPTTATPSTTV 87
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAI 97
EA M G+FRHLP+V+ G+++ ++ I + I
Sbjct: 88 FEAENLMTDGRFRHLPIVDGGKLVGVVSIGDVVKSLI 124
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 170 MLELRLSSAVVTVENKPR-GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPI 228
+ E R+ + VV N GIL+ +D++ + + ++MT P AT T +
Sbjct: 28 LAEKRIGAVVVQSPNSDLLGILSERDVVRSLAANGAATLEMEASQLMTRAPTTATPSTTV 87
Query: 229 VDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
+A ++M DG+F HLP+VD G +V VV + + + + T+
Sbjct: 88 FEAENLMTDGRFRHLPIVD-GGKLVGVVSIGDVVKSLIETQ 127
>gi|312136464|ref|YP_004003801.1| signal transduction protein with cbs domains [Methanothermus
fervidus DSM 2088]
gi|311224183|gb|ADP77039.1| putative signal transduction protein with CBS domains
[Methanothermus fervidus DSM 2088]
Length = 188
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ +RV ++++ D++ + G++T+ DI +V+A++L E VS++MT+N + ++
Sbjct: 33 MSKKRVGSIIIKDNSGPI-GLVTESDIIRKVVAKDLKASEVKVSEIMTKNLITIEPESEI 91
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
EA M + R LPVV+NG ++ ++
Sbjct: 92 REAAHLMAKNNIRRLPVVKNGVLVGII 118
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
V+T P +V A M + R+ S ++ + P G++T DI+ +V++++L A V +
Sbjct: 17 VITAPPNISVAEAAAIMSKKRVGSIIIKDNSGPIGLVTESDIIRKVVAKDLKASEVKVSE 76
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA-TEILL 272
+MT N ++ I +A H+M LPVV ++G +V ++ I A TEIL+
Sbjct: 77 IMTKNLITIEPESEIREAAHLMAKNNIRRLPVV-KNGVLVGIITSTDIMVVAPELTEILV 135
Query: 273 DQ 274
+
Sbjct: 136 EN 137
>gi|393775714|ref|ZP_10364025.1| putative signal-transduction protein [Ralstonia sp. PBA]
gi|392717440|gb|EIZ05003.1| putative signal-transduction protein [Ralstonia sp. PBA]
Length = 146
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ + + A+L+ + + ++ GI+T++D A +++ + + + TPV +MTR +V
Sbjct: 32 MSEKSIGAVLVMEGDEIV-GIVTERDYARKIVLMDRSSKSTPVRDIMTRAVIYVGPQEDN 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
+ M + + RHLPV+E+G++I L+ I + D I+ +
Sbjct: 91 ERCMALMTERRLRHLPVLEHGKLIGLISIGDLVKDIISEQQ 131
>gi|333902040|ref|YP_004475913.1| signal transduction protein with CBS domains [Pseudomonas fulva
12-X]
gi|333117305|gb|AEF23819.1| putative signal transduction protein with CBS domains [Pseudomonas
fulva 12-X]
Length = 145
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + AL++ + L GI++++D +V +E + VS++MT V A
Sbjct: 33 MAEKGIGALVVLEGERL-AGIVSERDYVRKVAVQERSPANLKVSEIMTAKVITVSPGEDA 91
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
++ M G+ RHLPVVE+G ++ LL I + D I++ E
Sbjct: 92 RHCMELMTNGRLRHLPVVEDGRLVGLLSIGDLVKDIISQQE 132
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
S V +++P +V A K M E + + VV + GI++ +D + +V Q + V
Sbjct: 15 SNVYSVTPDSSVFAAVKLMAEKGIGALVVLEGERLAGIVSERDYVRKVAVQERSPANLKV 74
Query: 212 EKVMTPNPECATIDTPIVDALH---IMHDGKFLHLPVVDRDGDVVDVVDV 258
++MT + T+ +P DA H +M +G+ HLPVV+ DG +V ++ +
Sbjct: 75 SEIMT--AKVITV-SPGEDARHCMELMTNGRLRHLPVVE-DGRLVGLLSI 120
>gi|15679237|ref|NP_276354.1| inosine-5'-monophosphate dehydrogenase [Methanothermobacter
thermautotrophicus str. Delta H]
gi|2622337|gb|AAB85715.1| inosine-5'-monophosphate dehydrogenase related protein V
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 187
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
S V+T P +V A M E ++ S +V ++P G++T DI+ +V+S++L A V
Sbjct: 15 SNVITADPGISVAEAASIMTEKKVGSIIVKSNSEPEGLITESDIIRKVVSRDLRASEVTV 74
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV---DVIHITHAAVAT 268
+VMT N D + +A +M LPVV RDG +V ++ DV+ + A T
Sbjct: 75 GEVMTRNLISIEPDRELSEAARLMAKNSIRRLPVV-RDGALVGILTSSDVMMV--APELT 131
Query: 269 EILLDQ 274
EIL++
Sbjct: 132 EILVEN 137
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ++V ++++ SN+ G++T+ DI +V++R+L E V +VMTRN + D
Sbjct: 33 MTEKKVGSIIVK-SNSEPEGLITESDIIRKVVSRDLRASEVTVGEVMTRNLISIEPDREL 91
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
EA + M + R LPVV +G ++ +L
Sbjct: 92 SEAARLMAKNSIRRLPVVRDGALVGIL 118
>gi|393773610|ref|ZP_10362005.1| hypothetical protein WSK_3002 [Novosphingobium sp. Rr 2-17]
gi|392720913|gb|EIZ78383.1| hypothetical protein WSK_3002 [Novosphingobium sp. Rr 2-17]
Length = 141
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A RR+ AL +T + + GI +++D+ R+ ++ + P+ VMT P V DT
Sbjct: 29 LADRRIGALPVT-QHGQIAGIFSERDVIYRLRQFGADVLDMPIGDVMTTPPVTVDPDTSV 87
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAA 104
+ AL M + + RHLPVV+ G +I + I + I ++E A
Sbjct: 88 MAALSLMTRRRIRHLPVVDRGGMIGFVSIGDLVKYRIDKIETEA 131
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%)
Query: 143 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQ 202
++ II + VVT + TV A + + R+ + VT + GI + +D++ R+
Sbjct: 2 TIGRIIQGRGPVVTCDASATVREAADLLADRRIGALPVTQHGQIAGIFSERDVIYRLRQF 61
Query: 203 NLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG 250
+ VMT P DT ++ AL +M + HLPVVDR G
Sbjct: 62 GADVLDMPIGDVMTTPPVTVDPDTSVMAALSLMTRRRIRHLPVVDRGG 109
>gi|294508474|ref|YP_003572532.1| hypothetical protein SRM_02659 [Salinibacter ruber M8]
gi|294344802|emb|CBH25580.1| Conserved hypothetical protein containing CBS domain [Salinibacter
ruber M8]
Length = 237
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
Query: 128 PNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPR 187
PN+ +E + E + + + V+T +P D+V +M E+ + S VVT +
Sbjct: 81 PNSSVEDVLE------AKGALHDPTTVLTAAPQDSVYDCIDRMAEIGVGSIVVTADGAIA 134
Query: 188 GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
GI T +D + ++ + T V+ VMT + T + DAL M D + HLPVVD
Sbjct: 135 GIFTERDHMRKMALEGRAPRDTAVQTVMTEDVATVTPAQSLEDALDRMRDLQCRHLPVVD 194
Query: 248 RDGDVVDVV 256
DG + ++
Sbjct: 195 ADGQLSGII 203
>gi|395803543|ref|ZP_10482789.1| signal-transduction protein [Flavobacterium sp. F52]
gi|395434355|gb|EJG00303.1| signal-transduction protein [Flavobacterium sp. F52]
Length = 141
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNP-TFVLSDTL 59
M + + A+L+ D N +L GIL+++D A +++ ++ + +ET V ++M + T LSD L
Sbjct: 30 MGEKNIGAILVMDDN-VLKGILSERDYARKIVLKDKSSKETFVHEIMESHVFTVKLSDNL 88
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIA 90
+ ++ M + + RHLPV+E+G V+ ++ I+
Sbjct: 89 E-DCMELMSEKRIRHLPVLEDGNVVGVISIS 118
>gi|407685210|ref|YP_006800384.1| Signaling protein [Alteromonas macleodii str. 'English Channel
673']
gi|407246821|gb|AFT76007.1| Signaling protein [Alteromonas macleodii str. 'English Channel
673']
Length = 609
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ++V +LL+T + L+ GI+TD+D+ +RV+A L++ PVS +MT NP ++ +
Sbjct: 172 MTNQKVSSLLVTREDKLI-GIITDRDLRSRVVAASLDIH-LPVSHIMTPNPAQIMGNRTL 229
Query: 61 VEALQKMVQGKFRHLPVVENGEVIAL 86
+AL M + HLPV++ ++ L
Sbjct: 230 FDALALMTERNIHHLPVIDQQTLVPL 255
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL-VEK 213
V++ ++ +A + M ++SS +VT E+K GI+T +D+ RV++ +L D L V
Sbjct: 157 VSVDIETSITVAAQIMTNQKVSSLLVTREDKLIGIITDRDLRSRVVAASL--DIHLPVSH 214
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDR 248
+MTPNP + + DAL +M + HLPV+D+
Sbjct: 215 IMTPNPAQIMGNRTLFDALALMTERNIHHLPVIDQ 249
>gi|407701445|ref|YP_006826232.1| Signaling protein [Alteromonas macleodii str. 'Black Sea 11']
gi|407250592|gb|AFT79777.1| Signaling protein [Alteromonas macleodii str. 'Black Sea 11']
Length = 609
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ++V +LL+T + L+ GI+TD+D+ +RV+A L++ PVS +MT NP ++ +
Sbjct: 172 MTTQKVSSLLVTREDKLI-GIITDRDLRSRVVAASLDIH-LPVSHIMTPNPAQIMGNRTL 229
Query: 61 VEALQKMVQGKFRHLPVVE 79
+AL M + HLPVV+
Sbjct: 230 FDALALMTERNIHHLPVVD 248
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL-VEK 213
V++ ++ A + M ++SS +VT E+K GI+T +D+ RV++ +L D L V
Sbjct: 157 VSVDVETSITAAAQLMTTQKVSSLLVTREDKLIGIITDRDLRSRVVAASL--DIHLPVSH 214
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDR 248
+MTPNP + + DAL +M + HLPVVD+
Sbjct: 215 IMTPNPAQIMGNRTLFDALALMTERNIHHLPVVDQ 249
>gi|114766363|ref|ZP_01445345.1| CBS domain protein [Pelagibaca bermudensis HTCC2601]
gi|114541396|gb|EAU44443.1| CBS domain protein [Roseovarius sp. HTCC2601]
Length = 149
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A RR+ +++++ GIL+++DI + A+ ++ V +MT N D +
Sbjct: 36 LAERRIGGVVISEDGQTPLGILSERDIVRVLSAQGADVLTATVDALMTTNLQTCTRDEDS 95
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIAR--MERAAEKG 107
L +M +G+FRH+PVVE G ++ ++ I + IA ME+ A +G
Sbjct: 96 NVVLARMTEGRFRHMPVVEEGVMVGMISIGDLVAAQIAELSMEKEALQG 144
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 141 RPSLSTIIPEKS--KVVTISPTDTVLMATKKMLELRLSSAVVTVENK-PRGILTSKDILM 197
R + I+ +K+ VVT+ P TV A + + E R+ V++ + + P GIL+ +DI+
Sbjct: 5 RMQVQQILKDKADDGVVTVPPATTVAEAVRMLAERRIGGVVISEDGQTPLGILSERDIVR 64
Query: 198 RVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVD 257
+ +Q + V+ +MT N + T D L M +G+F H+PVV+ +G +V ++
Sbjct: 65 VLSAQGADVLTATVDALMTTNLQTCTRDEDSNVVLARMTEGRFRHMPVVE-EGVMVGMIS 123
Query: 258 VIHITHAAVA 267
+ + A +A
Sbjct: 124 IGDLVAAQIA 133
>gi|163848274|ref|YP_001636318.1| hypothetical protein Caur_2724 [Chloroflexus aurantiacus J-10-fl]
gi|222526188|ref|YP_002570659.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Chloroflexus sp. Y-400-fl]
gi|163669563|gb|ABY35929.1| protein of unknown function DUF294 nucleotidyltransferase putative
[Chloroflexus aurantiacus J-10-fl]
gi|222450067|gb|ACM54333.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Chloroflexus sp. Y-400-fl]
Length = 613
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 78/155 (50%), Gaps = 15/155 (9%)
Query: 124 SISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVE 183
S S P F LR+ + RP V+ISP TV A + M + R+SS +V E
Sbjct: 140 SESNPALFQTRLRDLVARPP-----------VSISPEATVGDAARLMRDERISSLIV--E 186
Query: 184 NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHL 243
+ P GI+T +D+ RV+++ LP D+T V +VM+ D + L +M + HL
Sbjct: 187 HTPIGIITDRDLRNRVLAEGLP-DTTPVRQVMSAPATTIAADALAFEGLLLMLERGIHHL 245
Query: 244 PVVDRDGDVVDVVDVIHITHAAVATEILLDQIMRQ 278
P+V+ D VV VV I + + L +++++
Sbjct: 246 PLVEGD-RVVGVVTHTDILRRQSNSPLFLPRLLQR 279
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 20 GILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE 79
GI+TD+D+ RV+A L + TPV +VM+ T + +D LA E L M++ HLP+VE
Sbjct: 191 GIITDRDLRNRVLAEGLP-DTTPVRQVMSAPATTIAADALAFEGLLLMLERGIHHLPLVE 249
Query: 80 NGEVIALL 87
V+ ++
Sbjct: 250 GDRVVGVV 257
>gi|424037992|ref|ZP_17776665.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HENC-02]
gi|408894900|gb|EKM31460.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HENC-02]
Length = 620
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 15 NALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRH 74
N + G++TD+D+ RVIA+ ++ ++P+S+VMT +P + D L + A M+Q R+
Sbjct: 195 NDKIVGLITDRDMTKRVIAQGVS-TDSPISEVMTHDPQTIKPDDLVLHAASMMMQHNIRN 253
Query: 75 LPVVENGEVIALL 87
LP+VE+ +V+ +L
Sbjct: 254 LPLVESNKVVGVL 266
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
+V ++ ++ +ML AVV +K G++T +D+ RVI+Q + DS +
Sbjct: 164 GRVAVVTADQSIQAVANEMLTKCSPCAVVYENDKIVGLITDRDMTKRVIAQGVSTDSPIS 223
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEIL 271
E VMT +P+ D ++ A +M +LP+V+ + VV V+ H+ I
Sbjct: 224 E-VMTHDPQTIKPDDLVLHAASMMMQHNIRNLPLVESN-KVVGVLTTTHLVQNHRVQAIF 281
Query: 272 L 272
L
Sbjct: 282 L 282
>gi|345849228|ref|ZP_08802242.1| hypothetical protein SZN_05869 [Streptomyces zinciresistens K42]
gi|345639288|gb|EGX60781.1| hypothetical protein SZN_05869 [Streptomyces zinciresistens K42]
Length = 145
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 23/128 (17%)
Query: 6 VDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQ 65
V AL ++D N LCGILTD+DI +A + + ++ P ++ +D + L+
Sbjct: 33 VGALPISDQNERLCGILTDRDIVVGCVAMGHDPGQVTAGEMAQGTPRWIEADADIGDVLR 92
Query: 66 KMVQGKFRHLPVVENGEVIALL---DIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWG 122
+M + R LPV+EN ++ ++ D+A+ L EG HW
Sbjct: 93 EMTDHQIRRLPVIENKRLVGMISEADLARSL--------------------PEGDIGHWA 132
Query: 123 TSISGPNT 130
S+ NT
Sbjct: 133 ESVYAGNT 140
>gi|326386343|ref|ZP_08207966.1| signal-transduction protein [Novosphingobium nitrogenifigens DSM
19370]
gi|326209004|gb|EGD59798.1| signal-transduction protein [Novosphingobium nitrogenifigens DSM
19370]
Length = 121
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLS-DTL 59
+A RR+ AL + D A + GI +++D+ + ++ V VMT P S D
Sbjct: 8 LAERRIGALPVEDVGAEVAGIFSERDVLYSLQTNGADILRRKVRDVMT-TPVITASPDQS 66
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
+EAL M Q + RHLPV+E+G +IA + I + I R+E A+
Sbjct: 67 VLEALALMTQRRIRHLPVMEDGRMIAFISIGDLVKYRIERIEAEAD 112
>gi|259418936|ref|ZP_05742853.1| CBS domain protein [Silicibacter sp. TrichCH4B]
gi|259345158|gb|EEW57012.1| CBS domain protein [Silicibacter sp. TrichCH4B]
Length = 144
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 59/105 (56%), Gaps = 4/105 (3%)
Query: 6 VDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQ 65
+ ++++ N+ GIL+++DI ++ V MTR+ D++A EAL
Sbjct: 36 IGTVVVSADNSTPLGILSERDIVRKLAKVGSVCLGHKVEDYMTRDVVTCTQDSVAEEALA 95
Query: 66 KMVQGKFRHLPVVENGE---VIALLDIAKCLYDAIARMERAAEKG 107
M +G+FRH+PVVE+G +I+L D+ K + +A ME+ A +G
Sbjct: 96 TMTEGRFRHMPVVEDGALVGIISLGDVVKAQLNEVA-MEKTALEG 139
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Query: 150 EKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENK-PRGILTSKDILMRVISQNLPADS 208
E S+VVTI P T+ A + + E + + VV+ +N P GIL+ +DI+ ++
Sbjct: 11 EISEVVTIRPDATMEAAAQLLSEHGIGTVVVSADNSTPLGILSERDIVRKLAKVGSVCLG 70
Query: 209 TLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
VE MT + T D+ +AL M +G+F H+PVV+ DG +V ++
Sbjct: 71 HKVEDYMTRDVVTCTQDSVAEEALATMTEGRFRHMPVVE-DGALVGII 117
>gi|406598184|ref|YP_006749314.1| Signaling protein [Alteromonas macleodii ATCC 27126]
gi|406375505|gb|AFS38760.1| Signaling protein [Alteromonas macleodii ATCC 27126]
Length = 609
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ++V +LL+T + L+ GI+TD+D+ +RV+A L++ PVS +MT NP ++ +
Sbjct: 172 MTNQKVSSLLVTREDKLI-GIITDRDLRSRVVAASLDIH-LPVSHIMTPNPAQIMGNRTL 229
Query: 61 VEALQKMVQGKFRHLPVVENGEVIAL 86
+AL M + HLPV++ ++ L
Sbjct: 230 FDALALMTERNIHHLPVIDQQTLVPL 255
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL-VEK 213
V++ ++ +A + M ++SS +VT E+K GI+T +D+ RV++ +L D L V
Sbjct: 157 VSVDVETSITVAAQIMTNQKVSSLLVTREDKLIGIITDRDLRSRVVAASL--DIHLPVSH 214
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDR 248
+MTPNP + + DAL +M + HLPV+D+
Sbjct: 215 IMTPNPAQIMGNRTLFDALALMTERNIHHLPVIDQ 249
>gi|163751908|ref|ZP_02159121.1| CBS domain protein [Shewanella benthica KT99]
gi|161328191|gb|EDP99356.1| CBS domain protein [Shewanella benthica KT99]
Length = 515
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 5 RVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEAL 64
RV ++L+ D N L GILTD+D+ RV+A L+ PV + MT P + S +L EA+
Sbjct: 123 RVSSVLVID-NHQLVGILTDRDLRNRVLAEGLD-GHLPVHQAMTTRPKTLTSSSLVFEAM 180
Query: 65 QKMVQGKFRHLPVVENGEVIALL 87
M + HLP+V+ G+ I ++
Sbjct: 181 LLMSEHSINHLPIVDEGKPIGII 203
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL-VEK 213
+ I + TV A ++M +R+SS +V ++ GILT +D+ RV+++ L D L V +
Sbjct: 104 LVIDSSSTVGEAAQQMRLVRVSSVLVIDNHQLVGILTDRDLRNRVLAEGL--DGHLPVHQ 161
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILL- 272
MT P+ T + + +A+ +M + HLP+VD +G + ++ I + +LL
Sbjct: 162 AMTTRPKTLTSSSLVFEAMLLMSEHSINHLPIVD-EGKPIGIITSTDILRGQSSQPLLLI 220
Query: 273 DQIMRQ 278
+I RQ
Sbjct: 221 SEIERQ 226
>gi|217976546|ref|YP_002360693.1| putative signal transduction protein with CBS domains [Methylocella
silvestris BL2]
gi|217501922|gb|ACK49331.1| putative signal transduction protein with CBS domains [Methylocella
silvestris BL2]
Length = 143
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARE-LNLEETPVSKVMTRNPTFVLSDTL 59
+A + + A+++TDS + GIL+++DI R + R+ + + SK MT L
Sbjct: 30 LAVQNIGAVVVTDSEGGVLGILSERDI-VRALGRDGASALDDAASKYMTAKVITTLESEC 88
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
A++KM +FRHLPVV++G++ L+ I + +A ME+ E
Sbjct: 89 VSIAMEKMTTRRFRHLPVVKDGKLAGLVSIGDLVKFRLAEMEQQHE 134
>gi|407689137|ref|YP_006804310.1| Signaling protein [Alteromonas macleodii str. 'Balearic Sea AD45']
gi|407292517|gb|AFT96829.1| Signaling protein [Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 609
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ++V +LL+T + L+ GI+TD+D+ +RV+A L++ PVS +MT NP ++ +
Sbjct: 172 MTNQKVSSLLVTREDKLI-GIITDRDLRSRVVAASLDIH-LPVSHIMTPNPAQIMGNRTL 229
Query: 61 VEALQKMVQGKFRHLPVVENGEVIAL 86
+AL M + HLPV++ ++ L
Sbjct: 230 FDALALMTERNIHHLPVIDQQTLVPL 255
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL-VEK 213
V++ ++ +A + M ++SS +VT E+K GI+T +D+ RV++ +L D L V
Sbjct: 157 VSVDVETSITVAAQIMTNQKVSSLLVTREDKLIGIITDRDLRSRVVAASL--DIHLPVSH 214
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDR 248
+MTPNP + + DAL +M + HLPV+D+
Sbjct: 215 IMTPNPAQIMGNRTLFDALALMTERNIHHLPVIDQ 249
>gi|294140464|ref|YP_003556442.1| hypothetical protein SVI_1693 [Shewanella violacea DSS12]
gi|293326933|dbj|BAJ01664.1| CBS domain protein [Shewanella violacea DSS12]
Length = 620
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RV ++L+ D N L GILTD+D+ RV+A + PV + MT P ++S +L
Sbjct: 181 MRLARVSSVLVMD-NHRLVGILTDRDLRNRVLAEGQGVH-LPVHQAMTPGPITLISSSLV 238
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
EA+ M + HLP+VE G I +L
Sbjct: 239 FEAMLLMSEQSIHHLPIVEEGVPIGIL 265
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 11/118 (9%)
Query: 166 ATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQ----NLPADSTLVEKVMTPNPEC 221
A KKM R+SS +V ++ GILT +D+ RV+++ +LP V + MTP P
Sbjct: 177 AAKKMRLARVSSVLVMDNHRLVGILTDRDLRNRVLAEGQGVHLP-----VHQAMTPGPIT 231
Query: 222 ATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILL-DQIMRQ 278
+ + +A+ +M + HLP+V+ +G + ++ I + +LL +I RQ
Sbjct: 232 LISSSLVFEAMLLMSEQSIHHLPIVE-EGVPIGILTSTDILRGQSSQPLLLIGEIKRQ 288
>gi|398828308|ref|ZP_10586509.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Phyllobacterium sp.
YR531]
gi|398218343|gb|EJN04853.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Phyllobacterium sp.
YR531]
Length = 143
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 61/112 (54%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A ++ A+++ D N + GIL+++D+ + A + P+S++MT +
Sbjct: 30 LAKYKIGAIVVCDDNKAIKGILSERDVVRAIAADGADALWKPISEIMTIKVKVCTENHTI 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAA 112
+ ++ M QG+FRHLPV ++G + ++ I + I +ER +++ ++ A
Sbjct: 90 NQVMETMTQGRFRHLPVEKDGRLHGIVSIGDVVKLRIEEVERESQEIRSYIA 141
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVISQNLPADSTLVE 212
V + +P T+ A + + ++ + VV +NK +GIL+ +D++ + + A +
Sbjct: 14 VFSTNPDMTLADAITVLAKYKIGAIVVCDDNKAIKGILSERDVVRAIAADGADALWKPIS 73
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG---DVVDVVDVIHI 261
++MT + T + I + M G+F HLP V++DG +V + DV+ +
Sbjct: 74 EIMTIKVKVCTENHTINQVMETMTQGRFRHLP-VEKDGRLHGIVSIGDVVKL 124
>gi|398853662|ref|ZP_10610258.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM80]
gi|398238902|gb|EJN24622.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM80]
Length = 146
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + V ALL+ + + ++ GI++++D A +++ + TPV +M N V +
Sbjct: 34 MAEKNVGALLVVEDDKVV-GIISERDYARKLVLHGRSSVGTPVRDIMVANVITVDTHQTV 92
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
L M + RHLPVVENG++I LL I + +AIA
Sbjct: 93 DTCLGIMSDKRLRHLPVVENGKLIGLLSIGDLVKEAIA 130
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 5/122 (4%)
Query: 150 EKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADST 209
+ +V I P VL A KM E + + +V ++K GI++ +D +++ + T
Sbjct: 14 KNQEVHQIKPDHMVLEALMKMAEKNVGALLVVEDDKVVGIISERDYARKLVLHGRSSVGT 73
Query: 210 LVEKVMTPNPECATIDT-PIVD-ALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
V +M N T+DT VD L IM D + HLPVV+ +G ++ ++ + + A+A
Sbjct: 74 PVRDIMVAN--VITVDTHQTVDTCLGIMSDKRLRHLPVVE-NGKLIGLLSIGDLVKEAIA 130
Query: 268 TE 269
+
Sbjct: 131 EQ 132
>gi|70729700|ref|YP_259439.1| hypothetical protein PFL_2332 [Pseudomonas protegens Pf-5]
gi|68343999|gb|AAY91605.1| CBS domain protein [Pseudomonas protegens Pf-5]
Length = 146
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 58/99 (58%), Gaps = 3/99 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + V AL + + N ++ G+++++D A +++ + TPVS +M+ +P + +
Sbjct: 34 MAEKNVGALPVLE-NGVVVGVISERDYARKLVLHGRSSVGTPVSAIMS-SPVITVDSHQS 91
Query: 61 VE-ALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
V+ + M RHLPVVENG+++ LL I + +AIA
Sbjct: 92 VDTCMNIMTDSHLRHLPVVENGQLLGLLSIGDLVKEAIA 130
>gi|51244818|ref|YP_064702.1| hypothetical protein DP0966 [Desulfotalea psychrophila LSv54]
gi|50875855|emb|CAG35695.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
Length = 625
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 56/95 (58%), Gaps = 7/95 (7%)
Query: 1 MAARRVDALLLT------DSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFV 54
MAA V A+L++ + + GI+TD+D+ +RV+A ++ +T VSKVM+ + F+
Sbjct: 176 MAAENVSAILISPPENTSEDDEPFAGIITDRDLCSRVLAEGVS-SDTAVSKVMSTDLIFL 234
Query: 55 LSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDI 89
S+ EA+ M++ HLPV+ N I +++I
Sbjct: 235 DSNAYVFEAMLTMLRNNIHHLPVLRNKTPIGIIEI 269
>gi|126459277|ref|YP_001055555.1| signal-transduction protein [Pyrobaculum calidifontis JCM 11548]
gi|126248998|gb|ABO08089.1| putative signal-transduction protein with CBS domains [Pyrobaculum
calidifontis JCM 11548]
Length = 127
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M A V ++++ + + L GI+T++DI R +A+E++L+ TP+ +V + D
Sbjct: 27 MYAANVGSVVVLERDGRLAGIVTERDI-VRFLAQEVDLK-TPLGQVARKQVITASPDEAV 84
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCL 93
V A KM++ RH+PVVE G VI ++ I L
Sbjct: 85 VSAAVKMIENNIRHMPVVEGGRVIGVISIRDVL 117
>gi|77459957|ref|YP_349464.1| signal transduction protein [Pseudomonas fluorescens Pf0-1]
gi|77383960|gb|ABA75473.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 146
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + V ALL+ + + ++ GI++++D A +++ + TPV +M N V +
Sbjct: 34 MAEKNVGALLVVEDDNVV-GIISERDYARKLVLHGRSSVGTPVRDIMVANVITVDTHQTV 92
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
L M + RHLPVVENG++I LL I + +AIA
Sbjct: 93 DTCLGIMSDKRLRHLPVVENGKLIGLLSIGDLVKEAIA 130
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Query: 149 PEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADS 208
P+ +V I P VL A KM E + + +V ++ GI++ +D +++ +
Sbjct: 13 PKNQEVHQIKPDHMVLEALMKMAEKNVGALLVVEDDNVVGIISERDYARKLVLHGRSSVG 72
Query: 209 TLVEKVMTPNPECATIDT-PIVD-ALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
T V +M N T+DT VD L IM D + HLPVV+ +G ++ ++ + + A+
Sbjct: 73 TPVRDIMVAN--VITVDTHQTVDTCLGIMSDKRLRHLPVVE-NGKLIGLLSIGDLVKEAI 129
Query: 267 ATE 269
A +
Sbjct: 130 AEQ 132
>gi|260427030|ref|ZP_05781009.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Citreicella sp. SE45]
gi|260421522|gb|EEX14773.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Citreicella sp. SE45]
Length = 607
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA RRV ++ + + AL GILT +D++ +V+AR L + TPV++VMT P + +
Sbjct: 168 MAERRVSSVCIIEGEAL-KGILTIRDVSAKVVARGLPFD-TPVTQVMTEAPLTLAPSDIG 225
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
+ L M++ H+PV E G ++ ++
Sbjct: 226 SDVLHMMMERNIGHVPVTEGGRLVGIV 252
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKV 214
+TI P TV A M E R+SS + +GILT +D+ +V+++ LP D T V +V
Sbjct: 153 LTIGPGATVQEAASLMAERRVSSVCIIEGEALKGILTIRDVSAKVVARGLPFD-TPVTQV 211
Query: 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITH-AAVATEILLD 273
MT P D LH+M + H+PV + G +V +V +T AV++ L+
Sbjct: 212 MTEAPLTLAPSDIGSDVLHMMMERNIGHVPVTE-GGRLVGIVTQTDLTRFQAVSSAGLVA 270
Query: 274 QIMR 277
+I R
Sbjct: 271 EIAR 274
>gi|94263436|ref|ZP_01287249.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
gi|94270277|ref|ZP_01291697.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
gi|93450869|gb|EAT01888.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
gi|93456166|gb|EAT06305.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
Length = 643
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA ++ +LL+TDS + GI+TDKD+ T+V+A L+ +TP+ ++M + + +
Sbjct: 198 MAELQIGSLLVTDSGENIIGIVTDKDLRTKVVAAGLDY-QTPLERIMAAPVQTIPAHAVC 256
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
+A+ KM++ + HL V + GE++ ++
Sbjct: 257 FDAMLKMMRRRIHHLAVEKKGEIVGMI 283
>gi|448299925|ref|ZP_21489931.1| CBS domain containing protein [Natronorubrum tibetense GA33]
gi|445586785|gb|ELY41058.1| CBS domain containing protein [Natronorubrum tibetense GA33]
Length = 134
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 166 ATKKMLELRLSSAVVTVE-NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATI 224
A ++ML + S +V E N+ GILTS D ++++++ P D T V M+ N AT
Sbjct: 26 AAQQMLANEIGSVIVVNEDNQLEGILTSTD-FVQIVAERKPKDQTPVSTYMSRNVTTATA 84
Query: 225 DTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
I DA +M + F HLPVVD D V+ +V
Sbjct: 85 QETIRDAADLMVEHGFHHLPVVDEDEGVIGIV 116
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M A + ++++ + + L GILT D +++A ++TPVS M+RN T +
Sbjct: 30 MLANEIGSVIVVNEDNQLEGILTSTDFV-QIVAERKPKDQTPVSTYMSRNVTTATAQETI 88
Query: 61 VEALQKMVQGKFRHLPVVENGE----VIALLDIAKCL 93
+A MV+ F HLPVV+ E ++ D+A L
Sbjct: 89 RDAADLMVEHGFHHLPVVDEDEGVIGIVTTSDLAAYL 125
>gi|444914119|ref|ZP_21234264.1| CBS domain containing membrane protein [Cystobacter fuscus DSM
2262]
gi|444715053|gb|ELW55926.1| CBS domain containing membrane protein [Cystobacter fuscus DSM
2262]
Length = 142
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
+V I PTDTV A +KM +L + V + +G++T +DI++R I++++ T V
Sbjct: 12 EVEVIRPTDTVREAARKMRDLDVGPIPVCDGKRVQGMITDRDIVVRAIAEDMDPARTAVS 71
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
+MT E D D L M + + VVDRD ++V +V
Sbjct: 72 DIMTKGIEYCFEDDQAEDVLDRMEEQQLRRFIVVDRDKNLVGIV 115
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 16/102 (15%)
Query: 20 GILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE 79
G++TD+DI R IA +++ T VS +MT+ + D A + L +M + + R VV+
Sbjct: 47 GMITDRDIVVRAIAEDMDPARTAVSDIMTKGIEYCFEDDQAEDVLDRMEEQQLRRFIVVD 106
Query: 80 NGE----VIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGV 117
+ ++AL D+A E G + A+EG+
Sbjct: 107 RDKNLVGIVALGDLA------------GEESGHRVGKALEGI 136
>gi|358011810|ref|ZP_09143620.1| CBS domain pair family protein [Acinetobacter sp. P8-3-8]
Length = 143
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Query: 143 SLSTIIPEKS--KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVI 200
+++ +I +K+ +V TISP+ TVL A M + + VVT ++K GIL+ +D ++
Sbjct: 3 TVAQVIQDKAGQEVHTISPSATVLAAITLMANKGIGAVVVTQDSKVVGILSERDYTRKIA 62
Query: 201 SQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
+D T V ++MTP T + D L +M DG HLPV++
Sbjct: 63 LMQRTSDHTTVAEIMTPKVISVTPSHTVDDCLSLMTDGHLRHLPVME 109
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + A+++T + ++ GIL+++D ++ + + T V+++MT V
Sbjct: 32 MANKGIGAVVVTQDSKVV-GILSERDYTRKIALMQRTSDHTTVAEIMTPKVISVTPSHTV 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIA 90
+ L M G RHLPV+E +++ + I
Sbjct: 91 DDCLSLMTDGHLRHLPVMEGEKLVGFISIG 120
>gi|148256526|ref|YP_001241111.1| hypothetical protein BBta_5213 [Bradyrhizobium sp. BTAi1]
gi|146408699|gb|ABQ37205.1| hypothetical protein BBta_5213 [Bradyrhizobium sp. BTAi1]
Length = 142
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVL-SDTL 59
+A R++ A+L+ S + + GIL+++DI + R + PVS VMTR +DT+
Sbjct: 30 LADRKIGAVLVM-SGSRMEGILSERDIVRSLGERGAAVLTEPVSGVMTRRVVSCRPADTV 88
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIA 90
A ++ M GKFRHLPV++ G V+ L+ I
Sbjct: 89 A-SIMETMTTGKFRHLPVIDGGLVVGLISIG 118
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
+V ++ P T+ A K + + ++ + +V ++ GIL+ +DI+ + + + V
Sbjct: 13 QVESVEPQTTLADAAKLLADRKIGAVLVMSGSRMEGILSERDIVRSLGERGAAVLTEPVS 72
Query: 213 KVMTPNP-ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
VMT C DT + + M GKF HLPV+D G VV ++ +
Sbjct: 73 GVMTRRVVSCRPADT-VASIMETMTTGKFRHLPVID-GGLVVGLISI 117
>gi|86357820|ref|YP_469712.1| inosine-5`-monophosphate dehydrogenase [Rhizobium etli CFN 42]
gi|86281922|gb|ABC90985.1| putative inosine-5`-monophosphate dehydrogenase protein [Rhizobium
etli CFN 42]
Length = 144
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 58/113 (51%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
++ +++ A+++ + G+ T++D+ + R + P+S+VMT +T
Sbjct: 32 LSKKKIGAIVVVGMENRISGMFTERDLVHAIAKRGKESLDQPLSQVMTSKVYRCHEETTV 91
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113
E ++ M +FRH+PV NG++ ++ I + IA +ER AE KA A
Sbjct: 92 NELMELMTSRRFRHVPVESNGKLAGIISIGDVVKSRIAEVEREAEDIKAYIAG 144
>gi|381393725|ref|ZP_09919444.1| CBS domain-containing protein [Glaciecola punicea DSM 14233 = ACAM
611]
gi|379330619|dbj|GAB54577.1| CBS domain-containing protein [Glaciecola punicea DSM 14233 = ACAM
611]
Length = 625
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 159 PTDTVLMATKKMLELRLSSAVVTVENKPR-----GILTSKDILMRVISQNLPADSTLVEK 213
PTDTV A +M E R+SS +V R GILT +D+ RV++ + ST V +
Sbjct: 172 PTDTVKHAAVQMNERRVSSVLVMSNEVHREKVLVGILTDRDLRSRVVASGISL-STPVSE 230
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
VMT P T + I DA+ IM++ HLPV+D
Sbjct: 231 VMTKQPVFLTRNETIFDAICIMNEQSIHHLPVLD 264
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 1 MAARRVDALLLTDSNA----LLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLS 56
M RRV ++L+ + +L GILTD+D+ +RV+A ++L TPVS+VMT+ P F+
Sbjct: 183 MNERRVSSVLVMSNEVHREKVLVGILTDRDLRSRVVASGISLS-TPVSEVMTKQPVFLTR 241
Query: 57 DTLAVEALQKMVQGKFRHLPVVE 79
+ +A+ M + HLPV++
Sbjct: 242 NETIFDAICIMNEQSIHHLPVLD 264
>gi|332796600|ref|YP_004458100.1| signal-transduction protein with CBS domains [Acidianus hospitalis
W1]
gi|332694335|gb|AEE93802.1| putative signal-transduction protein with CBS domains [Acidianus
hospitalis W1]
Length = 127
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 168 KKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTP 227
K MLE + S +VT P+GI T +D + + S P+D V M N ++T
Sbjct: 26 KLMLERGIGSVLVTENGVPKGIFTDRDAVKAIASGFSPSDEVRVAATMG-NLIIVDLNTD 84
Query: 228 IVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
IV+A+ IM K HLPV D +G++V ++ ++ + A
Sbjct: 85 IVEAVSIMTKNKIRHLPVKDSEGNIVGILSIVDASKA 121
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELN-LEETPVSKVMTRNPTFVLSDTL 59
M R + ++L+T+ N + GI TD+D A + IA + +E V+ M N V +T
Sbjct: 28 MLERGIGSVLVTE-NGVPKGIFTDRD-AVKAIASGFSPSDEVRVAATMG-NLIIVDLNTD 84
Query: 60 AVEALQKMVQGKFRHLPVVEN-GEVIALLDI 89
VEA+ M + K RHLPV ++ G ++ +L I
Sbjct: 85 IVEAVSIMTKNKIRHLPVKDSEGNIVGILSI 115
>gi|422298489|ref|ZP_16386089.1| CBS domain-containing protein [Pseudomonas avellanae BPIC 631]
gi|422589447|ref|ZP_16664109.1| CBS domain-containing protein [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|330876235|gb|EGH10384.1| CBS domain-containing protein [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|407989823|gb|EKG32058.1| CBS domain-containing protein [Pseudomonas avellanae BPIC 631]
Length = 146
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + AL + + N + G+++++D A +V+ + + TPVS++M+ V S
Sbjct: 34 MADKNIGALPVVE-NGTVVGVVSERDYARKVVLKGRSSVGTPVSEIMSSKVITVNSQQTV 92
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
+ M RHLPVVE+G+++ LL I + +AIA
Sbjct: 93 ETCMGIMTDSHLRHLPVVEDGQLLGLLSIGDLVKEAIA 130
>gi|171321846|ref|ZP_02910746.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria MEX-5]
gi|171092865|gb|EDT38118.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria MEX-5]
Length = 153
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+ D + + GI+T++D A +V+ ++ + + T V ++MT +V
Sbjct: 35 MAEKGIGALLVVDGDDI-AGIVTERDYARKVVLQDRSSKATRVEEIMTAKVRYVEPSQST 93
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
E + M + + RHLPV++ G++I L+ I + IA
Sbjct: 94 DECMALMTEHRMRHLPVLDGGKLIGLISIGDLVKSVIA 131
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+ T++ TD V A K M E + + +V + GI+T +D +V+ Q+ + +T VE+
Sbjct: 19 IYTVTKTDFVYDAIKLMAEKGIGALLVVDGDDIAGIVTERDYARKVVLQDRSSKATRVEE 78
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
+MT + + +M + + HLPV+D G ++ ++ + + + +A +
Sbjct: 79 IMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIADQ 133
>gi|209963839|ref|YP_002296754.1| hypothetical protein RC1_0504 [Rhodospirillum centenum SW]
gi|209957305|gb|ACI97941.1| conserved domain protein [Rhodospirillum centenum SW]
Length = 144
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 5 RVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVL-SDTLAVEA 63
R+ A L D + + GI++++DI + + E VS +MTR SDT+A
Sbjct: 34 RIGAALAIDDDGGIAGIISERDIVRGLGEHGAAVMERKVSDLMTRKVVGCAPSDTVA-SV 92
Query: 64 LQKMVQGKFRHLPVVENGEVIALLDIA 90
+ KM G+FRHLPV+E G ++ + I
Sbjct: 93 MTKMTSGRFRHLPVMEGGRLVGFISIG 119
>gi|424032987|ref|ZP_17772403.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HENC-01]
gi|408875066|gb|EKM14220.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HENC-01]
Length = 620
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 15 NALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRH 74
N + G++TD+D+ RVIA+ ++ + +P+S+VMT P + D L + A M+Q R+
Sbjct: 195 NDKIVGLITDRDMTKRVIAQGISTD-SPISEVMTHEPQTIKPDDLVLHAASMMMQHNIRN 253
Query: 75 LPVVENGEVIALL 87
LP+VE+ +V+ +L
Sbjct: 254 LPLVESNKVVGVL 266
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
+V ++ ++ +ML AVV +K G++T +D+ RVI+Q + DS +
Sbjct: 164 GRVAVVTADQSIQTVANEMLTKCSPCAVVYENDKIVGLITDRDMTKRVIAQGISTDSPIS 223
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEIL 271
E VMT P+ D ++ A +M +LP+V+ + VV V+ H+ I
Sbjct: 224 E-VMTHEPQTIKPDDLVLHAASMMMQHNIRNLPLVESN-KVVGVLTTTHLVQNHRVQAIF 281
Query: 272 L 272
L
Sbjct: 282 L 282
>gi|167565573|ref|ZP_02358489.1| CBS domain protein [Burkholderia oklahomensis EO147]
Length = 154
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+ D A + GI+T++D A +V+ + + + T V ++MT +V +
Sbjct: 35 MAEKSIGALLVMD-GADIAGIVTERDYARKVVLLDRSSKATRVEEIMTSKVRYVEPTQTS 93
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
E + M + + RHLPV+++G++I L+ I + IA
Sbjct: 94 DECMALMTEHRMRHLPVLDDGKLIGLVSIGDLVKSVIA 131
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 65/129 (50%), Gaps = 3/129 (2%)
Query: 149 PEKSKVV-TISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPAD 207
P+ + + TI +D+V A K M E + + +V GI+T +D +V+ + +
Sbjct: 13 PDSGRTIHTIEKSDSVYNAIKLMAEKSIGALLVMDGADIAGIVTERDYARKVVLLDRSSK 72
Query: 208 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
+T VE++MT + + +M + + HLPV+D DG ++ +V + + + +A
Sbjct: 73 ATRVEEIMTSKVRYVEPTQTSDECMALMTEHRMRHLPVLD-DGKLIGLVSIGDLVKSVIA 131
Query: 268 -TEILLDQI 275
+ +DQ+
Sbjct: 132 DQQFTIDQL 140
>gi|317131700|ref|YP_004091014.1| putative signal transduction protein with CBS domains
[Ethanoligenens harbinense YUAN-3]
gi|315469679|gb|ADU26283.1| putative signal transduction protein with CBS domains
[Ethanoligenens harbinense YUAN-3]
Length = 162
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
+++V++ PT TV A M + S V RG+LT +DI++R +S+N AD+ V
Sbjct: 35 TRIVSVEPTATVREAATLMSRNNIGSVPVVDGGAVRGMLTDRDIVLRCVSENKDADTVKV 94
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEI 270
+ T P+ +A+H+M + LPVVD +G +V ++ + E+
Sbjct: 95 SDICTHGAVSVRPQDPVSNAMHLMSAEQVRRLPVVD-NGKLVGMLSFADVAREKTGMEV 152
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ + ++ + D A+ G+LTD+DI R ++ + + VS + T V
Sbjct: 53 MSRNNIGSVPVVDGGAVR-GMLTDRDIVLRCVSENKDADTVKVSDICTHGAVSVRPQDPV 111
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIA 111
A+ M + R LPVV+NG+++ +L A +AR + E ++I+
Sbjct: 112 SNAMHLMSAEQVRRLPVVDNGKLVGMLSFAD-----VAREKTGMEVAQSIS 157
>gi|119871878|ref|YP_929885.1| signal-transduction protein [Pyrobaculum islandicum DSM 4184]
gi|119673286|gb|ABL87542.1| putative signal-transduction protein with CBS domains [Pyrobaculum
islandicum DSM 4184]
Length = 139
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +V ++++ D GI+T++D+ V+AR L +TP VMT NP + D L
Sbjct: 37 MYENKVGSVVIVDEEGKPVGIITERDLVY-VVARSLA-PDTPAWMVMTENPIVIREDALI 94
Query: 61 VEALQKMVQGKFRHLPVVE-NGEVIALL 87
EA++KM RHLPVV+ +G ++ +L
Sbjct: 95 TEAMEKMRVQNIRHLPVVDTSGRLVGML 122
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 57/113 (50%), Gaps = 9/113 (7%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAV-VTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
V+T D + KM E ++ S V V E KP GI+T +D L+ V++++L D T
Sbjct: 21 VITAKKDDKIKDIAIKMYENKVGSVVIVDEEGKPVGIITERD-LVYVVARSLAPD-TPAW 78
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVV------DVVDVI 259
VMT NP D I +A+ M HLPVVD G +V DVVD +
Sbjct: 79 MVMTENPIVIREDALITEAMEKMRVQNIRHLPVVDTSGRLVGMLSFRDVVDFV 131
>gi|156743854|ref|YP_001433983.1| hypothetical protein Rcas_3932 [Roseiflexus castenholzii DSM 13941]
gi|156235182|gb|ABU59965.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Roseiflexus castenholzii DSM
13941]
Length = 623
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 20 GILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE 79
GI+TD+D+ RV+A L+ +TP+++VMT V +D+L E L KM++ HLP+ +
Sbjct: 201 GIVTDRDLRNRVVAEGLD-HQTPIAQVMTAPAITVPADSLVFEGLLKMIEHGVHHLPLSD 259
Query: 80 NGEVIALLDIAKCL 93
G++I ++ L
Sbjct: 260 GGQIIGVVSYRDFL 273
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 63/123 (51%), Gaps = 9/123 (7%)
Query: 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVE-----NKPRGILTSK 193
+F+ L +I E +VT++P TV A ++M E + S+ +V + + GI+T +
Sbjct: 149 LFQTRLRDLITEP--LVTVAPDTTVREAARRMREAQASALIVDLPPYGMLDAGSGIVTDR 206
Query: 194 DILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVV 253
D+ RV+++ L T + +VMT D+ + + L M + HLP+ D G ++
Sbjct: 207 DLRNRVVAEGL-DHQTPIAQVMTAPAITVPADSLVFEGLLKMIEHGVHHLPLSD-GGQII 264
Query: 254 DVV 256
VV
Sbjct: 265 GVV 267
>gi|302878359|ref|YP_003846923.1| PAS/PAC and GAF sensor-containing diguanylate
cyclase/phosphodiesterase [Gallionella capsiferriformans
ES-2]
gi|302581148|gb|ADL55159.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(s) [Gallionella capsiferriformans ES-2]
Length = 1301
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 115/276 (41%), Gaps = 45/276 (16%)
Query: 5 RVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEAL 64
R+ +LL+ N L GI+T++D+ + A +TPVS++M+ DT A
Sbjct: 34 RMSSLLVMSDNTPL-GIITERDLLRHLSAH--TSRQTPVSEIMSHPVLTAAPDTGFTAAY 90
Query: 65 QKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVE-GVEKHWGT 123
+++ RHL VV+ KG I A E H G
Sbjct: 91 SQVLNHHVRHLVVVDG-------------------------KGGVIGLASETDFRNHLGA 125
Query: 124 SISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVE 183
+ LR+ L ++ K + + P D + A ML+ R S A+V
Sbjct: 126 DL---------LRKL---DDLQAVMDHK--LPQLRPEDKLSDAVAMMLQDRTSYALVVEN 171
Query: 184 NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHL 243
P GILT +D + + P + + +VM + TP+ + +M ++ HL
Sbjct: 172 GLPLGILTERD-MAGLFVNGAPVEGVSLREVMHSPVLTVSHQTPVFEMAGLMQASRYRHL 230
Query: 244 PVVDRDGDVVDVVDVIHITHAAVATEILLDQIMRQQ 279
VVD G V+ +V +H A +A ++ ++ +R+Q
Sbjct: 231 VVVDDAGLVLGMV-TLHKLMARIAATVMNEETLRRQ 265
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRV---ISQNLPADST 209
+V + P T+ A K+M + R+SS +V +N P GI+T +D+L + S+ P
Sbjct: 13 QVRHVLPDCTIGDAAKQMNDARMSSLLVMSDNTPLGIITERDLLRHLSAHTSRQTPVSEI 72
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDV 255
+ V+T P DT A + + HL VVD G V+ +
Sbjct: 73 MSHPVLTAAP-----DTGFTAAYSQVLNHHVRHLVVVDGKGGVIGL 113
>gi|226941745|ref|YP_002796819.1| hypothetical protein LHK_02830 [Laribacter hongkongensis HLHK9]
gi|226716672|gb|ACO75810.1| CBS domain protein [Laribacter hongkongensis HLHK9]
Length = 151
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPV 77
L GI +++D A R+I TPV+ VMT V DT A + + M + RHLPV
Sbjct: 49 LVGIFSERDYARRMILEGRQSSGTPVTAVMTERVIVVHPDTPASQCMAIMTDKRIRHLPV 108
Query: 78 VENGEVIALLDIAKCLYDAIARME 101
+NG VI ++ I + +A +
Sbjct: 109 ADNGRVIGMVSIGDVVRSTLAEQQ 132
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPR--GILTSKDILMRVISQNLPADSTLV 211
++ +SP TV A +K+ E + + V V + PR GI + +D R+I + + T V
Sbjct: 17 LIAVSPDCTVFQALQKLAEHDIGA--VAVMDGPRLVGIFSERDYARRMILEGRQSSGTPV 74
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
VMT DTP + IM D + HLPV D +G V+ +V + + + +A +
Sbjct: 75 TAVMTERVIVVHPDTPASQCMAIMTDKRIRHLPVAD-NGRVIGMVSIGDVVRSTLAEQ 131
>gi|83716568|ref|YP_439711.1| hypothetical protein BTH_II1515 [Burkholderia thailandensis E264]
gi|167578151|ref|ZP_02371025.1| CBS domain protein [Burkholderia thailandensis TXDOH]
gi|167616282|ref|ZP_02384917.1| CBS domain protein [Burkholderia thailandensis Bt4]
gi|257142850|ref|ZP_05591112.1| CBS domain-containing protein [Burkholderia thailandensis E264]
gi|83650393|gb|ABC34457.1| CBS domain protein [Burkholderia thailandensis E264]
Length = 153
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+ D A + GI+T++D A +V+ + + + T V ++MT +V +
Sbjct: 35 MAEKSIGALLVMD-GANIAGIVTERDYARKVVLLDRSSKATRVEEIMTSKVRYVEPTQTS 93
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
E + M + + RHLPV+++G++I L+ I + IA
Sbjct: 94 DECMALMTEHRMRHLPVLDDGKLIGLVSIGDLVKSVIA 131
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
Query: 149 PEKSKVV-TISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPAD 207
P+ + + + +D+V A K M E + + +V GI+T +D +V+ + +
Sbjct: 13 PDSGRTIHMVEKSDSVYNAIKLMAEKSIGALLVMDGANIAGIVTERDYARKVVLLDRSSK 72
Query: 208 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
+T VE++MT + + +M + + HLPV+D DG ++ +V + + + +A
Sbjct: 73 ATRVEEIMTSKVRYVEPTQTSDECMALMTEHRMRHLPVLD-DGKLIGLVSIGDLVKSVIA 131
Query: 268 -TEILLDQI 275
+ +DQ+
Sbjct: 132 DQQFTIDQL 140
>gi|313117289|ref|YP_004044272.1| transcriptional regulator [Halogeometricum borinquense DSM 11551]
gi|448287826|ref|ZP_21479031.1| putative transcriptional regulator, contains C-terminal CBS domains
[Halogeometricum borinquense DSM 11551]
gi|312294180|gb|ADQ68611.1| predicted transcriptional regulator, contains C-terminal CBS
domains [Halogeometricum borinquense DSM 11551]
gi|445570959|gb|ELY25517.1| putative transcriptional regulator, contains C-terminal CBS domains
[Halogeometricum borinquense DSM 11551]
Length = 405
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 86/198 (43%), Gaps = 15/198 (7%)
Query: 8 ALLLTDSNALLCGILTDKDIATRVIAREL------NLEETPVSKVMTRNPTFVLSDTLAV 61
A L+ DS++ L + D+ V A ++ L+ V V T V S+T A
Sbjct: 82 ARLMIDSDSQLLPVFEGDDVVGVVSADDILEAVQPFLDVATVGDVYTDELVSVESETTAG 141
Query: 62 EALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAI---ARMERAAEKGKAIAAAVEGVE 118
EA+ + + HLPVVE+ + +L LYD + ++ G A A G
Sbjct: 142 EAVTRFREHHITHLPVVEDDAAVGIL----SLYDMVDLTVHSGTQSQGGDATGADAFGGG 197
Query: 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSA 178
G + G E R+F + ++ S V TI P +T+ A + M E SS
Sbjct: 198 GTAGRTHRGGYGAREGELARLFDLPVRDVM--VSPVRTIRPDETLETAVEAMFETDGSSL 255
Query: 179 VVTVENKPRGILTSKDIL 196
VV ++ P GI+T DIL
Sbjct: 256 VVVEDDCPVGIVTKTDIL 273
>gi|83816083|ref|YP_446538.1| hypothetical protein SRU_2439 [Salinibacter ruber DSM 13855]
gi|83757477|gb|ABC45590.1| CBS domain pair protein [Salinibacter ruber DSM 13855]
Length = 229
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
Query: 128 PNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPR 187
PN+ +E + E + + + V+T +P D+V +M E+ + S VVT +
Sbjct: 73 PNSSVEDVLE------AKGALHDPTTVLTAAPQDSVYDCIDRMAEIGVGSIVVTADGAIA 126
Query: 188 GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
GI T +D + ++ + T V+ VMT + T + DAL M D + HLPVVD
Sbjct: 127 GIFTERDHMRKMALEGRAPRDTAVQTVMTEDVATVTPAQSLEDALDRMRDLQCRHLPVVD 186
Query: 248 RDGDVVDVV 256
DG + ++
Sbjct: 187 ADGQLSGII 195
>gi|374366874|ref|ZP_09624947.1| hypothetical protein OR16_13184 [Cupriavidus basilensis OR16]
gi|373101560|gb|EHP42608.1| hypothetical protein OR16_13184 [Cupriavidus basilensis OR16]
Length = 147
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+ + ++ GIL+++D A +VI ET V +MT +V D
Sbjct: 32 MAEKGIGALLVIERGDIV-GILSERDYARKVILMSRTSRETFVRDIMTSAVIYVRGDQST 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
E + M Q + RHLPV++ ++I +L I + D I+
Sbjct: 91 DECMALMTQHRMRHLPVMDGDQLIGMLSIGDLVKDIIS 128
Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+ +I P TV A + M E + + +V GIL+ +D +VI + + T V
Sbjct: 16 IYSIPPGATVYAALQLMAEKGIGALLVIERGDIVGILSERDYARKVILMSRTSRETFVRD 75
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
+MT D + + +M + HLPV+D D
Sbjct: 76 IMTSAVIYVRGDQSTDECMALMTQHRMRHLPVMDGD 111
>gi|312144456|ref|YP_003995902.1| KpsF/GutQ family protein [Halanaerobium hydrogeniformans]
gi|311905107|gb|ADQ15548.1| KpsF/GutQ family protein [Halanaerobium hydrogeniformans]
Length = 330
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M R+ + + D L GI+TD DI R++ + + + PV MT +P + D LA
Sbjct: 234 MTKTRMGSTSVVDQAGNLKGIITDGDI-RRLLEKSADFIDRPVKDYMTVDPVTITKDKLA 292
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCL 93
EALQ M + + LPVVE G+ +A+L+ L
Sbjct: 293 AEALQIMEEKEINDLPVVEAGKPVAMLNFQDLL 325
>gi|103488184|ref|YP_617745.1| signal-transduction protein [Sphingopyxis alaskensis RB2256]
gi|98978261|gb|ABF54412.1| putative signal-transduction protein with CBS domains [Sphingopyxis
alaskensis RB2256]
Length = 141
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A R+ A+ + D +A++ GI +++DI + + + + VMT++P D
Sbjct: 30 LAQNRIGAVPVVDGDAVV-GIFSERDIVRLISSYGPEALDRRIDDVMTKSPITCAPDMAV 88
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAA 104
+ AL +M Q + RHLPVVE G+++ + I + I R+E A
Sbjct: 89 IVALSQMTQKRIRHLPVVEGGKMVGFVSIGDLVKYRIDRIEAEA 132
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLP-ADSTL 210
V++ P DTV + + R+ + V + GI + +DI+ R+IS P A
Sbjct: 12 GSVISAQPDDTVRAVADLLAQNRIGAVPVVDGDAVVGIFSERDIV-RLISSYGPEALDRR 70
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
++ VMT +P D ++ AL M + HLPVV+
Sbjct: 71 IDDVMTKSPITCAPDMAVIVALSQMTQKRIRHLPVVE 107
>gi|227832961|ref|YP_002834668.1| signal-transduction protein [Corynebacterium aurimucosum ATCC
700975]
gi|262182552|ref|ZP_06041973.1| putative signal-transduction protein [Corynebacterium aurimucosum
ATCC 700975]
gi|227453977|gb|ACP32730.1| putative signal-transduction protein [Corynebacterium aurimucosum
ATCC 700975]
Length = 622
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 8/102 (7%)
Query: 1 MAARRVDALLLTDS----NALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLS 56
M V +LL+ +S + L GILTD+D+ TRV+A + + PV ++MT P V +
Sbjct: 177 MTEHGVSSLLVVESGEETDKRLTGILTDRDLRTRVLAAQRD-PAAPVGEIMTPQPLTVSA 235
Query: 57 DTLAVEALQKMVQGKFRHLPVVENGEVIALL---DIAKCLYD 95
D A+EAL M + HLPVV+ G + ++ D+ + L++
Sbjct: 236 DAPAMEALLHMAERGIHHLPVVKEGALQGIVTQSDVTRLLHN 277
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVT-----VENKPRGILTSKDILMRVIS-QNL 204
++ V+T T+ A M E +SS +V + + GILT +D+ RV++ Q
Sbjct: 158 RTDVLTAPAATTIREAALLMTEHGVSSLLVVESGEETDKRLTGILTDRDLRTRVLAAQRD 217
Query: 205 PADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV---DVIHI 261
PA V ++MTP P + D P ++AL M + HLPVV ++G + +V DV +
Sbjct: 218 PA--APVGEIMTPQPLTVSADAPAMEALLHMAERGIHHLPVV-KEGALQGIVTQSDVTRL 274
Query: 262 TH 263
H
Sbjct: 275 LH 276
>gi|260575234|ref|ZP_05843234.1| putative signal transduction protein with CBS domains [Rhodobacter
sp. SW2]
gi|259022494|gb|EEW25790.1| putative signal transduction protein with CBS domains [Rhodobacter
sp. SW2]
Length = 144
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 54/100 (54%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A +R+ AL+++ + GI++++D+ + R + PV +MT A
Sbjct: 31 LADKRIGALVVSSDGVAVAGIVSERDVVRELARRGPGVLRMPVESLMTTRVVGCGLQDRA 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARM 100
+ L++M +G+FRH+PV+E G ++ L+ I + +A +
Sbjct: 91 NDVLEQMTRGRFRHMPVLEGGRMVGLISIGDLVKARLAEL 130
>gi|399523073|ref|ZP_10763733.1| Signal transduction protein [Pseudomonas pseudoalcaligenes CECT
5344]
gi|399109101|emb|CCH40294.1| Signal transduction protein [Pseudomonas pseudoalcaligenes CECT
5344]
Length = 639
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 17 LLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLP 76
++ GILTD+D+ TRV+A L +TPVS++MT NP + +D EA+ M++ HLP
Sbjct: 209 VMAGILTDRDLRTRVVAAGLP-SDTPVSQIMTPNPITLQADDSVFEAMLCMLRNNIHHLP 267
Query: 77 VVENGE---VIALLDIAK 91
V+ V+AL DI +
Sbjct: 268 VLHRRRPVGVVALADIIR 285
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 188 GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
GILT +D+ RV++ LP+D T V ++MTPNP D + +A+ M HLPV+
Sbjct: 212 GILTDRDLRTRVVAAGLPSD-TPVSQIMTPNPITLQADDSVFEAMLCMLRNNIHHLPVLH 270
Query: 248 RDG--DVVDVVDVI 259
R VV + D+I
Sbjct: 271 RRRPVGVVALADII 284
>gi|339324215|ref|YP_004683908.1| inosine-5'-monophosphate dehydrogenase [Cupriavidus necator N-1]
gi|338164372|gb|AEI75427.1| inosine-5'-monophosphate dehydrogenase GuaB [Cupriavidus necator
N-1]
Length = 146
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+ + A+ GI++++D A +VI + ET V +MT +V +
Sbjct: 32 MAEKGIGALLVIEHGAI-QGIVSERDYARKVILMQRTSRETLVRDIMTNAVIYVGASQTT 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEK 106
E + M + + RHLPV+E E+I +L I + D I+ + E+
Sbjct: 91 DECMALMTRHRLRHLPVMEGEELIGMLSIGDLVKDIISEQQFIIEQ 136
>gi|91778034|ref|YP_553242.1| hypothetical protein Bxe_B2095 [Burkholderia xenovorans LB400]
gi|91690694|gb|ABE33892.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
Length = 164
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 65/132 (49%), Gaps = 7/132 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA R+V AL++ + GI+T++D A +++ + + TPV +M+ ++ D
Sbjct: 32 MAHRQVGALIVAH-EGRIAGIVTERDYARKIVLMDRSSRHTPVRDIMSTAVRYIGPDQTT 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEK------GKAIAAAV 114
E + M + + R+LPV+ G+VI ++ I + + I E+ ++ G AA
Sbjct: 91 EECMALMTEHRIRYLPVITAGQVIGMVSIGDLVQNLIVEHEQTIQQLEHYIHGNGFQAAQ 150
Query: 115 EGVEKHWGTSIS 126
G + S++
Sbjct: 151 SGSQARRAASLT 162
>gi|119387182|ref|YP_918237.1| signal-transduction protein [Paracoccus denitrificans PD1222]
gi|119377777|gb|ABL72541.1| putative signal-transduction protein with CBS domains [Paracoccus
denitrificans PD1222]
Length = 145
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 65/109 (59%), Gaps = 7/109 (6%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
++ +R+ A+++++ + GIL+++DI + R ++ P++++MT + A
Sbjct: 31 LSEKRIGAIVVSEDGKVPLGILSERDIVRELGRRGADVLGLPITELMTHKLATCTTGEDA 90
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAI-ARM-ERAAEK 106
+ L +M QG+FRHLPVV E G ++ L+ I DA+ AR+ E AAEK
Sbjct: 91 LVILDRMTQGRFRHLPVVDEAGAMVGLISIG----DAVSARLKELAAEK 135
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 11/113 (9%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENK-PRGILTSKDILMRVISQN-----LP 205
++ T++P +V A K + E R+ + VV+ + K P GIL+ +DI+ + + LP
Sbjct: 13 GEIFTVAPGASVADAAKLLSEKRIGAIVVSEDGKVPLGILSERDIVRELGRRGADVLGLP 72
Query: 206 ADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+ K+ T C T + +V L M G+F HLPVVD G +V ++ +
Sbjct: 73 ITELMTHKLAT----CTTGEDALV-ILDRMTQGRFRHLPVVDEAGAMVGLISI 120
>gi|427429553|ref|ZP_18919583.1| putative signal-transduction protein [Caenispirillum salinarum AK4]
gi|425880282|gb|EKV28981.1| putative signal-transduction protein [Caenispirillum salinarum AK4]
Length = 610
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
SK+++ +P + A + M E R+SS V K GI+T++D+ RV+++ AD+ L
Sbjct: 153 SKLLSAAPQTSAQDAARLMRENRISSLPVVEGEKLVGIVTTRDLSGRVLAEGRSADTPLA 212
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHIT 262
+ +MTP+P + + D L++M + + HLPVV RDG ++ ++ +T
Sbjct: 213 D-IMTPDPLTLSPQSLGSDILNMMLENRVGHLPVV-RDGKLLGMITQTDVT 261
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPV 77
L GI+T +D++ RV+A E +TP++ +MT +P + +L + L M++ + HLPV
Sbjct: 187 LVGIVTTRDLSGRVLA-EGRSADTPLADIMTPDPLTLSPQSLGSDILNMMLENRVGHLPV 245
Query: 78 VENGEVIALL 87
V +G+++ ++
Sbjct: 246 VRDGKLLGMI 255
>gi|409397204|ref|ZP_11248142.1| hypothetical protein C211_17130 [Pseudomonas sp. Chol1]
gi|409118364|gb|EKM94764.1| hypothetical protein C211_17130 [Pseudomonas sp. Chol1]
Length = 145
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + V AL + D++ L GI++++D A +++ + + TPVS +MT V
Sbjct: 32 MAEKNVGALPVADASGRLVGIVSERDYARKIVLQGRSSFVTPVSAIMTSKVITVEPRQSI 91
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
E ++ M + RHLPV++ G + LL I + + +A
Sbjct: 92 RECMEIMTEKHLRHLPVLDEGRTVGLLSIGDVVKETMA 129
Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Query: 154 VVTISPTDTVLMATKKMLELRLSS-AVVTVENKPRGILTSKDILMRVISQN-----LPAD 207
+V I+P D+V A K M E + + V + GI++ +D +++ Q P
Sbjct: 16 IVMIAPEDSVFDALKLMAEKNVGALPVADASGRLVGIVSERDYARKIVLQGRSSFVTPVS 75
Query: 208 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
+ + KV+T P + I + + IM + HLPV+D +G V ++ + + +A
Sbjct: 76 AIMTSKVITVEPRQS-----IRECMEIMTEKHLRHLPVLD-EGRTVGLLSIGDVVKETMA 129
Query: 268 TEILLDQIMRQ 278
+ L Q + Q
Sbjct: 130 EQDNLIQQLEQ 140
>gi|53804948|ref|YP_113249.1| sugar isomerase [Methylococcus capsulatus str. Bath]
gi|53758709|gb|AAU93000.1| sugar isomerase, KpsF/GutQ [Methylococcus capsulatus str. Bath]
Length = 330
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M A+++ + D + G+ TD D+ R++ + ++ TP++ VMTR+ V LA
Sbjct: 234 MTAKKLGMTAIVDGAGTIQGVFTDGDL-RRLLEKAQDIHATPITAVMTRSCVTVEGSLLA 292
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDI 89
EA++ M Q + LPVVENG +I +++
Sbjct: 293 AEAVRIMEQKRINALPVVENGRLIGAINM 321
>gi|28869810|ref|NP_792429.1| hypothetical protein PSPTO_2620 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213969942|ref|ZP_03398075.1| CBS domain protein [Pseudomonas syringae pv. tomato T1]
gi|301382215|ref|ZP_07230633.1| CBS domain protein [Pseudomonas syringae pv. tomato Max13]
gi|302061328|ref|ZP_07252869.1| CBS domain protein [Pseudomonas syringae pv. tomato K40]
gi|302134267|ref|ZP_07260257.1| CBS domain protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|422656000|ref|ZP_16718448.1| CBS domain protein [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|28853055|gb|AAO56124.1| CBS domain protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213925267|gb|EEB58829.1| CBS domain protein [Pseudomonas syringae pv. tomato T1]
gi|331014472|gb|EGH94528.1| CBS domain protein [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 146
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + AL + + N + G+++++D A +V+ + + TPVS++M+ V S
Sbjct: 34 MADKNIGALPVVE-NGTVVGVVSERDYARKVVLKGRSSVGTPVSEIMSSKVITVDSQQTV 92
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
+ M RHLPVVE+G+++ LL I + +AIA
Sbjct: 93 ETCMGIMTDSHLRHLPVVEDGQLLGLLSIGDLVKEAIA 130
>gi|374704423|ref|ZP_09711293.1| CBS domain-containing protein [Pseudomonas sp. S9]
Length = 669
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 17 LLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLP 76
++ GI+TD+D TRV+A+ L+ +TP+++VMT NP + SD EA+ M++ HLP
Sbjct: 233 VMVGIITDRDFRTRVVAQGLS-ADTPITEVMTNNPITLQSDDSVFEAILCMLRNNIHHLP 291
Query: 77 VVENGE---VIALLDIAK 91
+V V+ L DI K
Sbjct: 292 LVHRRRPVGVVTLADIIK 309
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 188 GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
GI+T +D RV++Q L AD+ + E VMT NP D + +A+ M HLP+V
Sbjct: 236 GIITDRDFRTRVVAQGLSADTPITE-VMTNNPITLQSDDSVFEAILCMLRNNIHHLPLVH 294
Query: 248 RDG--DVVDVVDVIHITHAAVATEILLDQIMRQQA 280
R VV + D+ I + + ++ L++ + +Q+
Sbjct: 295 RRRPVGVVTLADI--IKYESQSSLYLVNNVFNKQS 327
>gi|18313720|ref|NP_560387.1| hypothetical protein PAE2961 [Pyrobaculum aerophilum str. IM2]
gi|18161274|gb|AAL64569.1| conserved protein with 2 CBS domains [Pyrobaculum aerophilum str.
IM2]
Length = 139
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RV ++++ D GI+T++D+ V+AR L +TP VMT NP + + L
Sbjct: 37 MYENRVGSVVIIDDEGKPIGIVTERDMVY-VLARALP-PDTPAWMVMTENPVVINENALV 94
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALL 87
+EA+ KM + RHLPVV ++G+V+ ++
Sbjct: 95 IEAMDKMRELNIRHLPVVDQSGKVVGMV 122
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 6/98 (6%)
Query: 169 KMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTP 227
KM E R+ S V+ E KP GI+T +D ++ V+++ LP D T VMT NP +
Sbjct: 36 KMYENRVGSVVIIDDEGKPIGIVTERD-MVYVLARALPPD-TPAWMVMTENPVVINENAL 93
Query: 228 IVDALHIMHDGKFLHLPVVDRDGDVVDVV---DVIHIT 262
+++A+ M + HLPVVD+ G VV +V D++ T
Sbjct: 94 VIEAMDKMRELNIRHLPVVDQSGKVVGMVSFRDIVDFT 131
>gi|187251001|ref|YP_001875483.1| arabinose-5-phosphate isomerase [Elusimicrobium minutum Pei191]
gi|186971161|gb|ACC98146.1| Arabinose-5-phosphate isomerase [Elusimicrobium minutum Pei191]
Length = 329
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + A + D N L G TD D+ R + + N+ + VS +MT+ PT VL DT A
Sbjct: 228 MTKTKAGATSVVDKNGKLLGFFTDGDL-RRALQADHNILDKKVSAIMTKKPTAVLQDTPA 286
Query: 61 VEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMER 102
VEA + + + + ++PV++ G+V+ +LD + L D IA +++
Sbjct: 287 VEAAKIISERRIDNVPVIDKKGKVVGILDKSD-LIDFIALIDK 328
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 176 SSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK----VMTPNPECATIDTPIVDA 231
+++VV K G T D+ + L AD +++K +MT P DTP V+A
Sbjct: 235 ATSVVDKNGKLLGFFTDGDL-----RRALQADHNILDKKVSAIMTKKPTAVLQDTPAVEA 289
Query: 232 LHIMHDGKFLHLPVVDRDGDVVDVVD 257
I+ + + ++PV+D+ G VV ++D
Sbjct: 290 AKIISERRIDNVPVIDKKGKVVGILD 315
>gi|398989485|ref|ZP_10692726.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM24]
gi|399015857|ref|ZP_10718114.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Pseudomonas sp. GM16]
gi|398107339|gb|EJL97341.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Pseudomonas sp. GM16]
gi|398147643|gb|EJM36346.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM24]
Length = 146
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + V ALL+ + ++ GI++++D A +++ + TPV +M N V +
Sbjct: 34 MAEKNVGALLVVEDEKVV-GIISERDYARKLVLHGRSSVGTPVRDIMVANVITVDTHQTV 92
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
L M + RHLPVVENG++I LL I + +AIA
Sbjct: 93 DTCLGIMSDKRLRHLPVVENGKLIGLLSIGDLVKEAIA 130
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 5/120 (4%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
+V I P VL A KM E + + +V + K GI++ +D +++ + T V
Sbjct: 16 QEVHQIKPDHMVLEALMKMAEKNVGALLVVEDEKVVGIISERDYARKLVLHGRSSVGTPV 75
Query: 212 EKVMTPNPECATIDT-PIVD-ALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
+M N T+DT VD L IM D + HLPVV+ +G ++ ++ + + A+A +
Sbjct: 76 RDIMVAN--VITVDTHQTVDTCLGIMSDKRLRHLPVVE-NGKLIGLLSIGDLVKEAIAEQ 132
>gi|325970898|ref|YP_004247089.1| hypothetical protein [Sphaerochaeta globus str. Buddy]
gi|324026136|gb|ADY12895.1| CBS domain containing membrane protein [Sphaerochaeta globus str.
Buddy]
Length = 147
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIAR--ELNLEETPVSKVMTRNPTFVLSDT 58
+ ++ ALL+ + + GIL+++DI R LN V +VMT T+V
Sbjct: 31 LTEHKIGALLVLNEQGDIKGILSERDIIRHFSKRLEHLNTASIKVREVMTTGVTYVKPHQ 90
Query: 59 LAVEALQKMVQGKFRHLPVVENGEVIALLDIA 90
+ + L M G FRHLPVVE+ +VI ++ I
Sbjct: 91 SSEDCLHLMTAGHFRHLPVVEDDKVIGMISIG 122
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 12/123 (9%)
Query: 143 SLSTIIPEKSK-VVTISPTDTVLMATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVI 200
++ TI+ +K K V++I P D + A K+ E ++ + +V E +GIL+ +DI+
Sbjct: 3 NVQTILDQKGKLVISIGPDDALSHALLKLTEHKIGALLVLNEQGDIKGILSERDIIRHFS 62
Query: 201 S--QNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD--------G 250
++L S V +VMT D LH+M G F HLPVV+ D G
Sbjct: 63 KRLEHLNTASIKVREVMTTGVTYVKPHQSSEDCLHLMTAGHFRHLPVVEDDKVIGMISIG 122
Query: 251 DVV 253
DVV
Sbjct: 123 DVV 125
>gi|392374018|ref|YP_003205851.1| hypothetical protein DAMO_0951 [Candidatus Methylomirabilis
oxyfera]
gi|258591711|emb|CBE68012.1| conserved protein of unknown function [Candidatus Methylomirabilis
oxyfera]
Length = 153
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 8/104 (7%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ++V +L+ + LL G++TD+++ + +A N + T + ++M RNP + D
Sbjct: 27 MRDQKVGCVLIANEGKLL-GLITDRELTIQCVAEGWNPQTTRIEEIMIRNPYTIAPDFEM 85
Query: 61 VEALQKMVQGKFRHLPVVENGE----VIALLDIA---KCLYDAI 97
EA + Q K R PVVE+G+ ++++ D+A K +D I
Sbjct: 86 AEAARLFGQRKVRRFPVVEDGQKLLGILSVADVAPDFKAYFDGI 129
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
+ +VT SP +T +KM + ++ ++ E K G++T +++ ++ +++ +T +
Sbjct: 9 TDLVTASPWETAAEVARKMRDQKVGCVLIANEGKLLGLITDRELTIQCVAEGWNPQTTRI 68
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGD----VVDVVDV 258
E++M NP D + +A + K PVV+ DG ++ V DV
Sbjct: 69 EEIMIRNPYTIAPDFEMAEAARLFGQRKVRRFPVVE-DGQKLLGILSVADV 118
>gi|357974039|ref|ZP_09138010.1| signal-transduction protein [Sphingomonas sp. KC8]
Length = 151
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A++R+ A+ + D + + GIL+++DI + + + + PV KVMT V D
Sbjct: 39 IASKRIGAVPVMDGDTV-AGILSERDIIYHLQSDGAAILDWPVEKVMTAPAITVAGDVRI 97
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
+ AL M + + RHLPVV+ G ++ L+ I + I R+E A
Sbjct: 98 LHALSLMTKRRVRHLPVVDQGRLVGLVSIGDLVKARIDRIEAEAN 142
>gi|416908508|ref|ZP_11931183.1| signal-transduction protein [Burkholderia sp. TJI49]
gi|325528776|gb|EGD05835.1| signal-transduction protein [Burkholderia sp. TJI49]
Length = 153
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+ D + + GI+T++D A +V+ ++ + + T V ++MT +V
Sbjct: 35 MAEKGIGALLVVDGDDI-AGIVTERDYARKVVLQDRSSKATRVEEIMTAKVRYVEPSQTT 93
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
E + M + + RHLPV+++G+++ L+ I + IA
Sbjct: 94 DECMALMTEHRMRHLPVLDDGKLVGLISIGDLVKSVIA 131
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+ T++ D V A K M E + + +V + GI+T +D +V+ Q+ + +T VE+
Sbjct: 19 IYTVTKADLVYDAIKLMAEKGIGALLVVDGDDIAGIVTERDYARKVVLQDRSSKATRVEE 78
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
+MT + + +M + + HLPV+D DG +V ++ + + + +A +
Sbjct: 79 IMTAKVRYVEPSQTTDECMALMTEHRMRHLPVLD-DGKLVGLISIGDLVKSVIADQ 133
>gi|260773956|ref|ZP_05882871.1| Signal transduction protein [Vibrio metschnikovii CIP 69.14]
gi|260610917|gb|EEX36121.1| Signal transduction protein [Vibrio metschnikovii CIP 69.14]
Length = 623
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 20 GILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE 79
GI+TD+D+ V+A +N+ + P+ VMT+NP + +D ++A+ M+Q R LPVV
Sbjct: 203 GIVTDRDMTRNVVAAAVNITQ-PIRHVMTKNPQLIHADDKVIQAISIMLQYNIRCLPVVN 261
Query: 80 NGEVIALLDIAKCLYD 95
+V+ LL + +++
Sbjct: 262 GNQVVGLLTTSHLVHN 277
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 172 ELRLSS-AVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVD 230
E R SS AV+T +++ GI+T +D+ V++ + + + VMT NP+ D ++
Sbjct: 186 EGRFSSCAVITRQDEIVGIVTDRDMTRNVVAAAVNI-TQPIRHVMTKNPQLIHADDKVIQ 244
Query: 231 ALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITH 263
A+ IM LPVV+ + VV ++ H+ H
Sbjct: 245 AISIMLQYNIRCLPVVNGN-QVVGLLTTSHLVH 276
>gi|410698094|gb|AFV77162.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Thermus oshimai JL-2]
Length = 143
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A V ALL+ + + LL GI +++D A +++ ++T V +VMT NP V +T
Sbjct: 30 LARHDVGALLVMEGDRLL-GIFSERDYARKLVLLGRFSKDTLVREVMTENPITVTPETDL 88
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIA 90
EA++ M + + RHLPV+E G V+ ++ I
Sbjct: 89 EEAMRLMTEHRVRHLPVLEGGRVVGVVSIG 118
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
Query: 147 IIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPA 206
++ + V I P TVL A K++ + + +V ++ GI + +D +++ +
Sbjct: 7 LLRKGGAVYRIRPEATVLEALKELARHDVGALLVMEGDRLLGIFSERDYARKLVLLGRFS 66
Query: 207 DSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
TLV +VMT NP T +T + +A+ +M + + HLPV++ G VV VV + A +
Sbjct: 67 KDTLVREVMTENPITVTPETDLEEAMRLMTEHRVRHLPVLE-GGRVVGVVSIGDAVKAII 125
Query: 267 ATEILLDQ 274
+ +L Q
Sbjct: 126 TEQGVLIQ 133
>gi|158321036|ref|YP_001513543.1| signal-transduction protein [Alkaliphilus oremlandii OhILAs]
gi|158141235|gb|ABW19547.1| putative signal-transduction protein with CBS domains [Alkaliphilus
oremlandii OhILAs]
Length = 142
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSS-AVVTVENKPRGILTSKDILMRVISQNLPADSTL 210
+K+ P ++ KKM EL + S V +N+P GI+T +DI++R ++QN ++T
Sbjct: 9 NKIYAALPNASIAEVAKKMKELNVGSIPVCNQQNQPLGIITDRDIVLRCVAQNSKDNATA 68
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
E VM+ T DT I +A IM + + LPV++ +G +V +V +
Sbjct: 69 SE-VMSKGIVSVTPDTHIHEAARIMGENQVRRLPVIE-NGKMVGMVSI 114
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 20 GILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE 79
GI+TD+DI R +A+ + + S+VM++ V DT EA + M + + R LPV+E
Sbjct: 46 GIITDRDIVLRCVAQN-SKDNATASEVMSKGIVSVTPDTHIHEAARIMGENQVRRLPVIE 104
Query: 80 NGEVIALLDIAKCLYDAIARMERAAEKGKAIA 111
NG+++ ++ I D R + E G+A++
Sbjct: 105 NGKMVGMVSIG----DLAVRNDYENEAGEALS 132
>gi|89898826|ref|YP_521297.1| signal-transduction protein [Rhodoferax ferrireducens T118]
gi|89343563|gb|ABD67766.1| putative signal-transduction protein with CBS domains [Rhodoferax
ferrireducens T118]
Length = 142
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A V AL + + N L GI++++D +V N +ET V+ +MTR+ V +T
Sbjct: 31 LANYGVGALTVME-NGKLAGIVSERDYTRKVALMGKNSKETTVADIMTRDVITVTPNTGT 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMER 102
+ M Q K RHLPV++ EV+ L+ I + D IA E+
Sbjct: 90 HACMALMSQKKIRHLPVLDGAEVVGLISIRDLMDDIIADQEQ 131
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 11/142 (7%)
Query: 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRV 199
+P L + S V +SP+ TV A K + + + V K GI++ +D +V
Sbjct: 1 MKPVLELLKNRNSTVFQVSPSVTVFEALKLLANYGVGALTVMENGKLAGIVSERDYTRKV 60
Query: 200 ISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVI 259
+ T V +MT + T +T + +M K HLPV+D +VV +I
Sbjct: 61 ALMGKNSKETTVADIMTRDVITVTPNTGTHACMALMSQKKIRHLPVLDG----AEVVGLI 116
Query: 260 HITHAAVATEILLDQIMRQQAQ 281
I L+D I+ Q Q
Sbjct: 117 SIRD-------LMDDIIADQEQ 131
>gi|377820853|ref|YP_004977224.1| signal-transduction protein [Burkholderia sp. YI23]
gi|357935688|gb|AET89247.1| signal-transduction protein [Burkholderia sp. YI23]
Length = 185
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ V AL++T A+ CGI+T++D A +VI ++ T V ++MT V T A
Sbjct: 49 MSRAEVGALVVTVGGAV-CGIVTERDYARKVILQDKASRTTTVCEIMTAPIMSVSLRTSA 107
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIA 90
E + M Q + RHLPV+E G ++ ++ I
Sbjct: 108 DECMAMMTQQRIRHLPVIEGGRLMGMISIG 137
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
+ V TI +V A M + + VVTV GI+T +D +VI Q+ + +T V
Sbjct: 31 AAVHTIDAEASVYEAVALMSRAEVGALVVTVGGAVCGIVTERDYARKVILQDKASRTTTV 90
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
++MT ++ T + + +M + HLPV++
Sbjct: 91 CEIMTAPIMSVSLRTSADECMAMMTQQRIRHLPVIE 126
>gi|83943213|ref|ZP_00955673.1| hypothetical protein EE36_13568 [Sulfitobacter sp. EE-36]
gi|83846221|gb|EAP84098.1| hypothetical protein EE36_13568 [Sulfitobacter sp. EE-36]
Length = 144
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELN--LEETPVSKVMTRNPTFVLSDT 58
++ +R+ L+++ GIL+++DI R + RE L++T V +MTR+ D
Sbjct: 31 LSEKRIGTLVVSADGKTPDGILSERDIV-RTLGREGGGCLDDT-VEALMTRDLITCAKDE 88
Query: 59 LAVEALQKMVQGKFRHLPVVENGEVIALLDIA 90
A + L KM QG+FRH+PV+E+G +I L+ +
Sbjct: 89 TADDILAKMTQGRFRHMPVLEDGVLIGLISLG 120
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 144 LSTIIPEKS--KVVTISPTDTVLMATKKMLELRLSSAVVTVENK-PRGILTSKDILMRVI 200
+S I+ K+ V T+ P + A + E R+ + VV+ + K P GIL+ +DI+ +
Sbjct: 3 VSQILKTKADDSVTTVKPGTRISQAAAMLSEKRIGTLVVSADGKTPDGILSERDIVRTLG 62
Query: 201 SQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIH 260
+ VE +MT + D D L M G+F H+PV++ DG ++ ++ +
Sbjct: 63 REGGGCLDDTVEALMTRDLITCAKDETADDILAKMTQGRFRHMPVLE-DGVLIGLISLGD 121
Query: 261 ITHA 264
+ A
Sbjct: 122 VVKA 125
>gi|448347454|ref|ZP_21536326.1| CBS domain containing protein [Natrinema altunense JCM 12890]
gi|445630855|gb|ELY84115.1| CBS domain containing protein [Natrinema altunense JCM 12890]
Length = 134
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVV-TVENKPRGILTSKDILMRVISQNLPADST 209
S + T++P V A + ML+ + S VV +N+ GILT+ D +R++++ P D T
Sbjct: 11 SSSLHTVTPDTLVEDAAQDMLDNEIGSVVVIDDDNRLEGILTTTD-FVRIVAEQKPKDQT 69
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
V K M+ + A+ I DA +M + F H+PVVD D V+ +V
Sbjct: 70 PVSKYMSSDVVTASAQDSIRDAADVMVERGFHHIPVVDEDEGVIGMV 116
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + ++++ D + L GILT D R++A + ++TPVSK M+ + +
Sbjct: 30 MLDNEIGSVVVIDDDNRLEGILTTTDFV-RIVAEQKPKDQTPVSKYMSSDVVTASAQDSI 88
Query: 61 VEALQKMVQGKFRHLPVVENGE-VIALL---DIAKCL 93
+A MV+ F H+PVV+ E VI ++ D+A L
Sbjct: 89 RDAADVMVERGFHHIPVVDEDEGVIGMVTTSDLAGYL 125
>gi|328872298|gb|EGG20665.1| hypothetical protein DFA_00526 [Dictyostelium fasciculatum]
Length = 244
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 50/90 (55%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +V A+++ DS + GI +++D + R+L ++T V VMT V DT
Sbjct: 123 MHTNKVGAVIVVDSQNKMTGIFSERDYLNSLAVRDLKSKDTYVKDVMTTPVVTVRLDTST 182
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIA 90
+ ++ M Q +FRHLPV++ +++ ++ I
Sbjct: 183 AKCMKIMSQRRFRHLPVIDGDKLVGIVSIG 212
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSA-VVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
++ + DTVL A K+M ++ + VV +NK GI + +D L + ++L + T V+
Sbjct: 107 IIRVRENDTVLTAIKQMHTNKVGAVIVVDSQNKMTGIFSERDYLNSLAVRDLKSKDTYVK 166
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG--DVVDVVDVI-HI 261
VMT +DT + IM +F HLPV+D D +V + D++ HI
Sbjct: 167 DVMTTPVVTVRLDTSTAKCMKIMSQRRFRHLPVIDGDKLVGIVSIGDIVKHI 218
>gi|312112205|ref|YP_003990521.1| CBS domain containing protein [Geobacillus sp. Y4.1MC1]
gi|336236622|ref|YP_004589238.1| hypothetical protein Geoth_3289 [Geobacillus thermoglucosidasius
C56-YS93]
gi|423721087|ref|ZP_17695269.1| CBS domain containing protein [Geobacillus thermoglucosidans
TNO-09.020]
gi|311217306|gb|ADP75910.1| CBS domain containing protein [Geobacillus sp. Y4.1MC1]
gi|335363477|gb|AEH49157.1| CBS domain containing protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|383366440|gb|EID43731.1| CBS domain containing protein [Geobacillus thermoglucosidans
TNO-09.020]
Length = 148
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ + + AL + + N + G++TD+DI R A+ + TPVS+VMT D
Sbjct: 33 MSQKNIGALPVAE-NGQVKGMITDRDITLRTSAQGKDPASTPVSEVMTNRVVTGTPDMSV 91
Query: 61 VEALQKMVQGKFRHLPVVENGE---VIALLDIA 90
EA M Q + R LP+VEN + ++AL DIA
Sbjct: 92 QEAANVMAQNQVRRLPIVENNQLQGIVALGDIA 124
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
V T+SP TV A + M + + + V + +G++T +DI +R +Q ST V
Sbjct: 16 NVATVSPNQTVQEAAQIMSQKNIGALPVAENGQVKGMITDRDITLRTSAQGKDPASTPVS 75
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
+VMT T D + +A ++M + LP+V+ +
Sbjct: 76 EVMTNRVVTGTPDMSVQEAANVMAQNQVRRLPIVENN 112
>gi|89899448|ref|YP_521919.1| signal-transduction protein [Rhodoferax ferrireducens T118]
gi|89344185|gb|ABD68388.1| putative signal-transduction protein with CBS domains [Rhodoferax
ferrireducens T118]
Length = 140
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA R V A+L+ LL GI T++D RVIA+ + T +++VMT +P +
Sbjct: 31 MADRNVGAVLVVADEHLL-GIFTERDAVFRVIAKGRDANTTQLTEVMTVDPKTLEPGKTY 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL--------DIAKCLYDAIAR 99
AL M + FRH+PVVENG + ++ D+ + +++A R
Sbjct: 90 GHALLIMQENGFRHVPVVENGRPVGIISSRNAMDPDLEEYVFEARRR 136
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Query: 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMR 198
MF + +I+ E+ K +T P TV A + M + + + +V + GI T +D + R
Sbjct: 1 MFDQPIKSIM-EQKKFLTAPPETTVSDAARLMADRNVGAVLVVADEHLLGIFTERDAVFR 59
Query: 199 VISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
VI++ A++T + +VMT +P+ AL IM + F H+PVV+
Sbjct: 60 VIAKGRDANTTQLTEVMTVDPKTLEPGKTYGHALLIMQENGFRHVPVVE 108
>gi|407974351|ref|ZP_11155260.1| hypothetical protein NA8A_08609 [Nitratireductor indicus C115]
gi|407430040|gb|EKF42715.1| hypothetical protein NA8A_08609 [Nitratireductor indicus C115]
Length = 143
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARE-LNLEETPVSKVMTRNPTFVLSDTL 59
+A R + A+++T L+ GIL+++DI R + R + PVS+VMT
Sbjct: 30 LAERGIGAVVVTREEGLIAGILSERDI-VRALGRNGAEALDQPVSEVMTAKVQRCKEAHT 88
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIA 90
E +Q M G+FRHLPV NG + ++ I
Sbjct: 89 VNEVMQIMTAGRFRHLPVEHNGRIAGIISIG 119
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Query: 143 SLSTIIPEKSK-VVTISPTDTVLMATKKMLELRLSSAVVTVENK-PRGILTSKDILMRVI 200
++ I+ K + VVTISP ++ A + E + + VVT E GIL+ +DI+ +
Sbjct: 2 TVKAILDSKGRNVVTISPDKSLAEAAGLLAERGIGAVVVTREEGLIAGILSERDIVRALG 61
Query: 201 SQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
A V +VMT + + + + IM G+F HLP V+ +G + ++ +
Sbjct: 62 RNGAEALDQPVSEVMTAKVQRCKEAHTVNEVMQIMTAGRFRHLP-VEHNGRIAGIISI 118
>gi|335043357|ref|ZP_08536384.1| CBS-domain-containing membrane protein [Methylophaga
aminisulfidivorans MP]
gi|333789971|gb|EGL55853.1| CBS-domain-containing membrane protein [Methylophaga
aminisulfidivorans MP]
Length = 150
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+ R+ +L++T++N + GIL+++DI + + V+ MT NP D
Sbjct: 30 LMEHRIGSLIITEANGTMVGILSERDILKILDTHPEQWNQMLVNDAMTPNPYTCEPDNTL 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDI 89
E + KMV+ RHLPVV G++ +L I
Sbjct: 90 EEVMNKMVEHNIRHLPVVYKGKLEGMLSI 118
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 146 TIIPEKSK-VVTISPTDTVLMATKKMLELRLSSAVVTVENKPR-GILTSKDILMRVISQN 203
+I K K V+ +SP D++ A ++E R+ S ++T N GIL+ +DIL + +
Sbjct: 5 SITKNKGKPVIGLSPKDSLDKAVAMLMEHRIGSLIITEANGTMVGILSERDILKILDTHP 64
Query: 204 LPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDR 248
+ LV MTPNP D + + ++ M + HLPVV +
Sbjct: 65 EQWNQMLVNDAMTPNPYTCEPDNTLEEVMNKMVEHNIRHLPVVYK 109
>gi|294812311|ref|ZP_06770954.1| CBS domain-containing protein [Streptomyces clavuligerus ATCC
27064]
gi|294324910|gb|EFG06553.1| CBS domain-containing protein [Streptomyces clavuligerus ATCC
27064]
Length = 188
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 6 VDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQ 65
V AL + DSN LCGILTD+DI +A + + + P ++ + + + LQ
Sbjct: 82 VGALPIADSNERLCGILTDRDIVVGCVAVGHDPSKVTAGDLARGTPRWIDAGSGVEDVLQ 141
Query: 66 KMVQGKFRHLPVVENGEVIALL---DIAKCLYD 95
+M + R LPV+EN ++ ++ D+A+ L D
Sbjct: 142 EMEGHQIRRLPVIENKRLVGMISEADLARHLSD 174
>gi|87312318|ref|ZP_01094414.1| hypothetical protein DSM3645_04350 [Blastopirellula marina DSM
3645]
gi|87284963|gb|EAQ76901.1| hypothetical protein DSM3645_04350 [Blastopirellula marina DSM
3645]
Length = 174
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 183 ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLH 242
++P GI + +D L+R+ ST + MTP+P+ +TPI A+H M G + H
Sbjct: 81 HHRPIGIFSERDALLRLGPDYRDHLSTPISHFMTPDPQSVDKNTPITFAVHQMDVGHYRH 140
Query: 243 LPVVDRDGDVVDVVDV 258
LPVVD +G V V+ +
Sbjct: 141 LPVVDDEGRVKAVISI 156
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
++ + A+++TD + GI +++D R+ + TP+S MT +P V +T
Sbjct: 67 LSTNAIGAVVITDDHHRPIGIFSERDALLRLGPDYRDHLSTPISHFMTPDPQSVDKNTPI 126
Query: 61 VEALQKMVQGKFRHLPVVEN----GEVIALLDIAKCLYDAIARME 101
A+ +M G +RHLPVV++ VI++ D+ + L D IA E
Sbjct: 127 TFAVHQMDVGHYRHLPVVDDEGRVKAVISIRDLLRYLTDRIAEAE 171
>gi|421484626|ref|ZP_15932194.1| hypothetical protein QWC_18467 [Achromobacter piechaudii HLE]
gi|400197121|gb|EJO30089.1| hypothetical protein QWC_18467 [Achromobacter piechaudii HLE]
Length = 146
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA R + A+++ + + +L G+L+++D A +V+ ++ + T V +MT + +V
Sbjct: 32 MAERSIGAVVVVEGDTVL-GMLSERDYARKVVLQDRSSRSTKVRDIMTDSVYYVGPGDTR 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDA-------IARMERAAEKGKA 109
+ M + FRHLPV++N ++I LL I + D I +ER G A
Sbjct: 91 EHCMAMMTERHFRHLPVIDNEKLIGLLSIGDLVKDVMSEQKFIIHELERYISGGHA 146
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 11/121 (9%)
Query: 129 NTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRG 188
T E LRE+ P +S VVT+SP +V A K M E + + VV + G
Sbjct: 2 KTVAEILREK----------PNQS-VVTVSPDSSVYDAIKTMAERSIGAVVVVEGDTVLG 50
Query: 189 ILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDR 248
+L+ +D +V+ Q+ + ST V +MT + + +M + F HLPV+D
Sbjct: 51 MLSERDYARKVVLQDRSSRSTKVRDIMTDSVYYVGPGDTREHCMAMMTERHFRHLPVIDN 110
Query: 249 D 249
+
Sbjct: 111 E 111
>gi|336123248|ref|YP_004565296.1| Arabinose-5-phosphate isomerase [Vibrio anguillarum 775]
gi|335340971|gb|AEH32254.1| Arabinose-5-phosphate isomerase [Vibrio anguillarum 775]
Length = 324
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 13 DSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKF 72
DSN L GI TD D+ R++ + +++ +S+VMT+NPT + LAVE L M +
Sbjct: 240 DSNMQLIGIFTDGDL-RRILDKRIDIHSAAISEVMTQNPTVANPNMLAVEGLNLMQDKRI 298
Query: 73 RHLPVVENGEVIALLDI 89
L + ENG ++ L++
Sbjct: 299 NGLMLCENGTLVGALNM 315
>gi|239816604|ref|YP_002945514.1| signal transduction protein with CBS domains [Variovorax paradoxus
S110]
gi|239803181|gb|ACS20248.1| putative signal transduction protein with CBS domains [Variovorax
paradoxus S110]
Length = 142
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A V AL++ D + L+ G L+++D +V + N +E VS++MT + V T
Sbjct: 31 LARFEVGALMVMDGDRLV-GFLSERDYTRKVALQGKNSKEMKVSEIMTPDVMTVTPQTRT 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
+ M Q KFRHLPVV+ +V+ ++ I + D IA E
Sbjct: 90 RACMALMSQRKFRHLPVVDGAKVVGMISIQDLMDDIIADHE 130
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%)
Query: 158 SPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP 217
SP +V A + + + +V ++ G L+ +D +V Q + V ++MTP
Sbjct: 19 SPDTSVFDALATLARFEVGALMVMDGDRLVGFLSERDYTRKVALQGKNSKEMKVSEIMTP 78
Query: 218 NPECATIDTPIVDALHIMHDGKFLHLPVVD 247
+ T T + +M KF HLPVVD
Sbjct: 79 DVMTVTPQTRTRACMALMSQRKFRHLPVVD 108
>gi|11498453|ref|NP_069681.1| inosine monophosphate dehydrogenase [Archaeoglobus fulgidus DSM
4304]
gi|2649754|gb|AAB90390.1| inosine monophosphate dehydrogenase (guaB-1) [Archaeoglobus
fulgidus DSM 4304]
Length = 189
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 59/103 (57%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
V T+ TD+V KK++E + SAVV + +P GI+T KD++ +++++N LVE+
Sbjct: 15 VCTVKRTDSVHNLAKKLVEYGVGSAVVVEDGRPVGIVTEKDLISKIVARNKVPSKVLVEE 74
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
VM+ +T + +A IM LPVV+ + +++ ++
Sbjct: 75 VMSQPVITIGPNTSLREAARIMMKRGIRRLPVVNNNQELIGII 117
>gi|407779576|ref|ZP_11126831.1| CBS domain-containing protein [Nitratireductor pacificus pht-3B]
gi|407298707|gb|EKF17844.1| CBS domain-containing protein [Nitratireductor pacificus pht-3B]
Length = 173
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 10/127 (7%)
Query: 141 RPSLSTIIPEKSK-VVTISPTDTVLMATKKMLELRLSSAVVTVENKPR-GILTSKDILMR 198
R ++ I+ K + V++I P +T+ A + + + + + + T N G+L+ +DI+ +
Sbjct: 31 RATVRNILDRKGREVISIRPQETLYKAVEILRDKGIGALIATDANGGLVGVLSERDIVRK 90
Query: 199 VI---SQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG--DVV 253
+ LP VE +MT E T D P+V L M +G+F H+PVVD G +V
Sbjct: 91 LADTPGHTLPQR---VEDIMTRQVETCTPDEPLVSVLRRMTEGRFRHMPVVDETGLSGIV 147
Query: 254 DVVDVIH 260
+ DV+H
Sbjct: 148 TIGDVVH 154
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%)
Query: 6 VDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQ 65
+ AL+ TD+N L G+L+++DI ++ + V +MTR D V L+
Sbjct: 66 IGALIATDANGGLVGVLSERDIVRKLADTPGHTLPQRVEDIMTRQVETCTPDEPLVSVLR 125
Query: 66 KMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAA 104
+M +G+FRH+PVV+ + ++ I ++ + +E A
Sbjct: 126 RMTEGRFRHMPVVDETGLSGIVTIGDVVHYRLNELEYEA 164
>gi|167572679|ref|ZP_02365553.1| CBS domain protein [Burkholderia oklahomensis C6786]
Length = 154
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+ D A + GI+T++D A +V+ + + + T V ++MT +V +
Sbjct: 35 MAEKSIGALLVMD-GADIAGIVTERDYARKVVLLDRSSKATRVEEIMTSKVRYVEPTQTS 93
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
E + M + + RHLPV+++G +I L+ I + IA
Sbjct: 94 DECMALMTEHRMRHLPVLDDGRLIGLVSIGDLVKSVIA 131
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 65/129 (50%), Gaps = 3/129 (2%)
Query: 149 PEKSKVV-TISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPAD 207
P+ + + TI +D+V A K M E + + +V GI+T +D +V+ + +
Sbjct: 13 PDSGRTIHTIEKSDSVYNAIKLMAEKSIGALLVMDGADIAGIVTERDYARKVVLLDRSSK 72
Query: 208 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
+T VE++MT + + +M + + HLPV+D DG ++ +V + + + +A
Sbjct: 73 ATRVEEIMTSKVRYVEPTQTSDECMALMTEHRMRHLPVLD-DGRLIGLVSIGDLVKSVIA 131
Query: 268 -TEILLDQI 275
+ +DQ+
Sbjct: 132 DQQFTIDQL 140
>gi|77464146|ref|YP_353650.1| signal transduction protein [Rhodobacter sphaeroides 2.4.1]
gi|332559022|ref|ZP_08413344.1| signal transduction protein [Rhodobacter sphaeroides WS8N]
gi|77388564|gb|ABA79749.1| Predicted signal transduction protein containing cyclic
nucleotide-binding and CBS domains [Rhodobacter
sphaeroides 2.4.1]
gi|332276734|gb|EGJ22049.1| signal transduction protein [Rhodobacter sphaeroides WS8N]
Length = 606
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 6 VDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQ 65
V +L + + +A L GI+T +D+ +V+A L+ TPV++VMTR+P + + L + L
Sbjct: 172 VSSLGVVEGSAFL-GIVTTRDMTNKVVATGLD-PSTPVAEVMTRDPIALAPEALGSDILH 229
Query: 66 KMVQGKFRHLPVVENGEVIALL 87
M++ + HLPVVE G ++ ++
Sbjct: 230 VMLERRIGHLPVVEEGRLVGMI 251
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
K VT P +T+ A KM + +SS V + GI+T++D+ +V++ L ST V
Sbjct: 150 KPVTCGPAETIRAAAMKMRDAGVSSLGVVEGSAFLGIVTTRDMTNKVVATGLDP-STPVA 208
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHIT 262
+VMT +P + D LH+M + + HLPVV+ +G +V ++ +T
Sbjct: 209 EVMTRDPIALAPEALGSDILHVMLERRIGHLPVVE-EGRLVGMITQTDLT 257
>gi|114798278|ref|YP_761342.1| hypothetical protein HNE_2660 [Hyphomonas neptunium ATCC 15444]
gi|114738452|gb|ABI76577.1| CBS domain protein [Hyphomonas neptunium ATCC 15444]
Length = 144
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%)
Query: 4 RRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEA 63
RR+ A++ D++ + G+L+++DI + + + PV MTR + +D EA
Sbjct: 33 RRIGAVVTLDADGEIVGVLSERDIVRQFARQGEGALDMPVGNAMTRAVITISADAEVDEA 92
Query: 64 LQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKA 109
LQ M + RHLPVV N + + I + IA + AE K+
Sbjct: 93 LQLMTDRRIRHLPVVRNSRLTGFVSIGDLVKWKIAETQAEAEAMKS 138
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 144 LSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPR--GILTSKDILMRVIS 201
+ I+ +K + V D L ++L+ R AVVT++ G+L+ +DI+ +
Sbjct: 3 IEQILNDKGREVITLRADDTLREAARLLDERRIGAVVTLDADGEIVGVLSERDIVRQFAR 62
Query: 202 QNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVV 246
Q A V MT + D + +AL +M D + HLPVV
Sbjct: 63 QGEGALDMPVGNAMTRAVITISADAEVDEALQLMTDRRIRHLPVV 107
>gi|70605897|ref|YP_254767.1| hypothetical protein Saci_0044 [Sulfolobus acidocaldarius DSM 639]
gi|449066089|ref|YP_007433171.1| hypothetical protein SacN8_00210 [Sulfolobus acidocaldarius N8]
gi|68566545|gb|AAY79474.1| conserved Archaeal protein [Sulfolobus acidocaldarius DSM 639]
gi|449034597|gb|AGE70023.1| hypothetical protein SacN8_00210 [Sulfolobus acidocaldarius N8]
Length = 164
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 66/125 (52%), Gaps = 10/125 (8%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + +L++ D+ + GI+T++D+ R IA E N+ T VS MTRN V +
Sbjct: 29 MKKHNIGSLIVIDNRGKVSGIITERDLV-RAIA-EGNINST-VSNYMTRNVIGVTENFDP 85
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALL---DIAKCLYDA---IARMERAAEKGKAIAAA 113
+ALQ M+ FRHLP++ ++G V +L D+A+ L D E +G IA
Sbjct: 86 NQALQVMLDHGFRHLPIIGKDGRVKGILSIRDLARTLIDPHYLTYGKEPEEVRGTGIACP 145
Query: 114 VEGVE 118
V GVE
Sbjct: 146 VCGVE 150
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Query: 157 ISPTDTVLMATKKMLELRLSSAVVTVENKPR--GILTSKDILMRVISQNLPADSTLVEKV 214
I D+V A ++M + + S +V ++N+ + GI+T +D++ + N+ ++ V
Sbjct: 16 IREDDSVRFAAEEMKKHNIGSLIV-IDNRGKVSGIITERDLVRAIAEGNI---NSTVSNY 71
Query: 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
MT N T + AL +M D F HLP++ +DG V ++ +
Sbjct: 72 MTRNVIGVTENFDPNQALQVMLDHGFRHLPIIGKDGRVKGILSI 115
>gi|53717172|ref|YP_105966.1| hypothetical protein BMAA1350 [Burkholderia mallei ATCC 23344]
gi|53721906|ref|YP_110891.1| hypothetical protein BPSS0882 [Burkholderia pseudomallei K96243]
gi|67643288|ref|ZP_00442035.1| CBS domain protein [Burkholderia mallei GB8 horse 4]
gi|76818563|ref|YP_337630.1| hypothetical protein BURPS1710b_A2480 [Burkholderia pseudomallei
1710b]
gi|121597823|ref|YP_989945.1| hypothetical protein BMASAVP1_0334 [Burkholderia mallei SAVP1]
gi|124381836|ref|YP_001024428.1| hypothetical protein BMA10229_0612 [Burkholderia mallei NCTC 10229]
gi|126443222|ref|YP_001062287.1| CBS domain-containing protein [Burkholderia pseudomallei 668]
gi|126445993|ref|YP_001078149.1| CBS domain-containing protein [Burkholderia mallei NCTC 10247]
gi|126457700|ref|YP_001075253.1| CBS domain-containing protein [Burkholderia pseudomallei 1106a]
gi|134278834|ref|ZP_01765547.1| CBS domain protein [Burkholderia pseudomallei 305]
gi|167000166|ref|ZP_02265986.1| CBS domain protein [Burkholderia mallei PRL-20]
gi|167723227|ref|ZP_02406463.1| CBS domain protein [Burkholderia pseudomallei DM98]
gi|167742198|ref|ZP_02414972.1| CBS domain protein [Burkholderia pseudomallei 14]
gi|167819373|ref|ZP_02451053.1| CBS domain protein [Burkholderia pseudomallei 91]
gi|167827746|ref|ZP_02459217.1| CBS domain protein [Burkholderia pseudomallei 9]
gi|167849220|ref|ZP_02474728.1| CBS domain protein [Burkholderia pseudomallei B7210]
gi|167897818|ref|ZP_02485220.1| CBS domain protein [Burkholderia pseudomallei 7894]
gi|167906163|ref|ZP_02493368.1| CBS domain protein [Burkholderia pseudomallei NCTC 13177]
gi|167914486|ref|ZP_02501577.1| CBS domain protein [Burkholderia pseudomallei 112]
gi|167922385|ref|ZP_02509476.1| CBS domain protein [Burkholderia pseudomallei BCC215]
gi|217418559|ref|ZP_03450066.1| CBS domain protein [Burkholderia pseudomallei 576]
gi|226197756|ref|ZP_03793331.1| CBS domain protein [Burkholderia pseudomallei Pakistan 9]
gi|237509954|ref|ZP_04522669.1| CBS domain protein [Burkholderia pseudomallei MSHR346]
gi|242313105|ref|ZP_04812122.1| CBS domain protein [Burkholderia pseudomallei 1106b]
gi|254174393|ref|ZP_04881055.1| CBS domain protein [Burkholderia mallei ATCC 10399]
gi|254183336|ref|ZP_04889928.1| CBS domain protein [Burkholderia pseudomallei 1655]
gi|254189969|ref|ZP_04896478.1| CBS domain protein [Burkholderia pseudomallei Pasteur 52237]
gi|254193127|ref|ZP_04899562.1| CBS domain protein [Burkholderia pseudomallei S13]
gi|254200811|ref|ZP_04907176.1| CBS domain protein [Burkholderia mallei FMH]
gi|254204781|ref|ZP_04911134.1| CBS domain protein [Burkholderia mallei JHU]
gi|254263370|ref|ZP_04954235.1| CBS domain protein [Burkholderia pseudomallei 1710a]
gi|254300236|ref|ZP_04967682.1| CBS domain protein [Burkholderia pseudomallei 406e]
gi|254357030|ref|ZP_04973305.1| CBS domain protein [Burkholderia mallei 2002721280]
gi|386864670|ref|YP_006277618.1| hypothetical protein BP1026B_II0968 [Burkholderia pseudomallei
1026b]
gi|403522515|ref|YP_006658084.1| hypothetical protein BPC006_II1233 [Burkholderia pseudomallei
BPC006]
gi|418395944|ref|ZP_12969846.1| CBS domain-containing protein [Burkholderia pseudomallei 354a]
gi|418535801|ref|ZP_13101538.1| CBS domain-containing protein [Burkholderia pseudomallei 1026a]
gi|418543432|ref|ZP_13108789.1| CBS domain-containing protein [Burkholderia pseudomallei 1258a]
gi|418549968|ref|ZP_13114976.1| CBS domain-containing protein [Burkholderia pseudomallei 1258b]
gi|418555654|ref|ZP_13120344.1| CBS domain-containing protein [Burkholderia pseudomallei 354e]
gi|52212320|emb|CAH38344.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
gi|52423142|gb|AAU46712.1| CBS domain protein [Burkholderia mallei ATCC 23344]
gi|76583036|gb|ABA52510.1| CBS domain protein [Burkholderia pseudomallei 1710b]
gi|121225621|gb|ABM49152.1| CBS domain protein [Burkholderia mallei SAVP1]
gi|124289856|gb|ABM99125.1| CBS domain protein [Burkholderia mallei NCTC 10229]
gi|126222713|gb|ABN86218.1| CBS domain protein [Burkholderia pseudomallei 668]
gi|126231468|gb|ABN94881.1| CBS domain protein [Burkholderia pseudomallei 1106a]
gi|126238847|gb|ABO01959.1| CBS domain protein [Burkholderia mallei NCTC 10247]
gi|134249253|gb|EBA49334.1| CBS domain protein [Burkholderia pseudomallei 305]
gi|147748423|gb|EDK55498.1| CBS domain protein [Burkholderia mallei FMH]
gi|147754367|gb|EDK61431.1| CBS domain protein [Burkholderia mallei JHU]
gi|148026057|gb|EDK84180.1| CBS domain protein [Burkholderia mallei 2002721280]
gi|157809884|gb|EDO87054.1| CBS domain protein [Burkholderia pseudomallei 406e]
gi|157937646|gb|EDO93316.1| CBS domain protein [Burkholderia pseudomallei Pasteur 52237]
gi|160695439|gb|EDP85409.1| CBS domain protein [Burkholderia mallei ATCC 10399]
gi|169649881|gb|EDS82574.1| CBS domain protein [Burkholderia pseudomallei S13]
gi|184213869|gb|EDU10912.1| CBS domain protein [Burkholderia pseudomallei 1655]
gi|217397863|gb|EEC37878.1| CBS domain protein [Burkholderia pseudomallei 576]
gi|225930365|gb|EEH26377.1| CBS domain protein [Burkholderia pseudomallei Pakistan 9]
gi|235002159|gb|EEP51583.1| CBS domain protein [Burkholderia pseudomallei MSHR346]
gi|238524599|gb|EEP88031.1| CBS domain protein [Burkholderia mallei GB8 horse 4]
gi|242136344|gb|EES22747.1| CBS domain protein [Burkholderia pseudomallei 1106b]
gi|243063818|gb|EES46004.1| CBS domain protein [Burkholderia mallei PRL-20]
gi|254214372|gb|EET03757.1| CBS domain protein [Burkholderia pseudomallei 1710a]
gi|385352840|gb|EIF59227.1| CBS domain-containing protein [Burkholderia pseudomallei 1258a]
gi|385353208|gb|EIF59569.1| CBS domain-containing protein [Burkholderia pseudomallei 1258b]
gi|385354522|gb|EIF60786.1| CBS domain-containing protein [Burkholderia pseudomallei 1026a]
gi|385368339|gb|EIF73796.1| CBS domain-containing protein [Burkholderia pseudomallei 354e]
gi|385373249|gb|EIF78304.1| CBS domain-containing protein [Burkholderia pseudomallei 354a]
gi|385661798|gb|AFI69220.1| CBS domain-containing protein [Burkholderia pseudomallei 1026b]
gi|403077582|gb|AFR19161.1| CBS domain-containing protein [Burkholderia pseudomallei BPC006]
Length = 154
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+ D A + GI+T++D A +V+ + + + T V ++MT +V +
Sbjct: 35 MAEKSIGALLVMD-GANIAGIVTERDYARKVVLLDRSSKATRVEEIMTSKVRYVEPTQTS 93
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
E + M + + RHLPV+++G+++ L+ I + IA
Sbjct: 94 DECMALMTEHRMRHLPVLDDGKLVGLVSIGDLVKSVIA 131
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
Query: 149 PEKSKVV-TISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPAD 207
P+ + + + +D+V A K M E + + +V GI+T +D +V+ + +
Sbjct: 13 PDSGRTIHMVEKSDSVYNAIKLMAEKSIGALLVMDGANIAGIVTERDYARKVVLLDRSSK 72
Query: 208 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
+T VE++MT + + +M + + HLPV+D DG +V +V + + + +A
Sbjct: 73 ATRVEEIMTSKVRYVEPTQTSDECMALMTEHRMRHLPVLD-DGKLVGLVSIGDLVKSVIA 131
Query: 268 -TEILLDQI 275
+ +DQ+
Sbjct: 132 DQQFTIDQL 140
>gi|221640014|ref|YP_002526276.1| cyclic nucleotide-binding protein [Rhodobacter sphaeroides KD131]
gi|221160795|gb|ACM01775.1| Cyclic nucleotide-binding protein [Rhodobacter sphaeroides KD131]
Length = 611
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 6 VDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQ 65
V +L + + +A L GI+T +D+ +V+A L+ TPV++VMTR+P + + L + L
Sbjct: 177 VSSLGVVEGSAFL-GIVTTRDMTNKVVATGLD-PSTPVAEVMTRDPIALAPEALGSDILH 234
Query: 66 KMVQGKFRHLPVVENGEVIALL 87
M++ + HLPVVE G ++ ++
Sbjct: 235 VMLERRIGHLPVVEEGRLVGMI 256
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
K VT P +T+ A KM + +SS V + GI+T++D+ +V++ L ST V
Sbjct: 155 KPVTCGPAETIRAAAMKMRDAGVSSLGVVEGSAFLGIVTTRDMTNKVVATGLDP-STPVA 213
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHIT 262
+VMT +P + D LH+M + + HLPVV+ +G +V ++ +T
Sbjct: 214 EVMTRDPIALAPEALGSDILHVMLERRIGHLPVVE-EGRLVGMITQTDLT 262
>gi|161520491|ref|YP_001583918.1| signal-transduction protein [Burkholderia multivorans ATCC 17616]
gi|189353318|ref|YP_001948945.1| signal-transduction protein [Burkholderia multivorans ATCC 17616]
gi|421474512|ref|ZP_15922544.1| CBS domain protein [Burkholderia multivorans CF2]
gi|160344541|gb|ABX17626.1| putative signal-transduction protein with CBS domains [Burkholderia
multivorans ATCC 17616]
gi|189337340|dbj|BAG46409.1| putative signal-transduction protein [Burkholderia multivorans ATCC
17616]
gi|400232026|gb|EJO61674.1| CBS domain protein [Burkholderia multivorans CF2]
Length = 153
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ + + ALL+ D + + GI+T++D A +V+ ++ + + T V ++MT +V +
Sbjct: 35 MSDKGIGALLVMDGDDI-AGIVTERDYARKVVLQDRSSKATRVEEIMTTKVRYVEPSQTS 93
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
E + M + + RHLPV+++G++I L+ I + IA
Sbjct: 94 DECMALMTEHRMRHLPVLDDGKLIGLVSIGDLVKSVIA 131
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+ T+ TD V A K M + + + +V + GI+T +D +V+ Q+ + +T VE+
Sbjct: 19 IYTVKKTDLVYDAIKLMSDKGIGALLVMDGDDIAGIVTERDYARKVVLQDRSSKATRVEE 78
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
+MT + + +M + + HLPV+D DG ++ +V + + + +A +
Sbjct: 79 IMTTKVRYVEPSQTSDECMALMTEHRMRHLPVLD-DGKLIGLVSIGDLVKSVIADQ 133
>gi|187924051|ref|YP_001895693.1| hypothetical protein Bphyt_2066 [Burkholderia phytofirmans PsJN]
gi|187715245|gb|ACD16469.1| CBS domain containing protein [Burkholderia phytofirmans PsJN]
Length = 163
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA RRV AL++ + GI+T++D A ++ + TPV +M+ +V
Sbjct: 32 MAHRRVGALIVVH-EGRVAGIVTERDYARKIALMHRSSRNTPVRDIMSTTVRYVGPGQTT 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME---RAAE---KGKAIAAAV 114
E + M + + R+LPV+ G+VI ++ I + + IA E R E G +
Sbjct: 91 EECMALMTEYRIRYLPVITEGQVIGMVSIGDLIKNLIAEQEDTIRQLEHYIHGNTVQVGQ 150
Query: 115 EGVEKH 120
G + H
Sbjct: 151 RGFQTH 156
>gi|429206302|ref|ZP_19197570.1| putative signal-transduction protein [Rhodobacter sp. AKP1]
gi|428191023|gb|EKX59567.1| putative signal-transduction protein [Rhodobacter sp. AKP1]
Length = 606
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 6 VDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQ 65
V +L + + +A L GI+T +D+ +V+A L+ TPV++VMTR+P + + L + L
Sbjct: 172 VSSLGVVEGSAFL-GIVTTRDMTNKVVATGLD-PSTPVAEVMTRDPIALAPEALGSDILH 229
Query: 66 KMVQGKFRHLPVVENGEVIALL 87
M++ + HLPVVE G ++ ++
Sbjct: 230 VMLERRIGHLPVVEEGRLVGMI 251
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
K VT P +T+ A KM + +SS V + GI+T++D+ +V++ L ST V
Sbjct: 150 KPVTCGPAETIRAAAMKMRDAGVSSLGVVEGSAFLGIVTTRDMTNKVVATGLDP-STPVA 208
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHIT 262
+VMT +P + D LH+M + + HLPVV+ +G +V ++ +T
Sbjct: 209 EVMTRDPIALAPEALGSDILHVMLERRIGHLPVVE-EGRLVGMITQTDLT 257
>gi|126459756|ref|YP_001056034.1| signal-transduction protein [Pyrobaculum calidifontis JCM 11548]
gi|126249477|gb|ABO08568.1| putative signal-transduction protein with CBS domains [Pyrobaculum
calidifontis JCM 11548]
Length = 138
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ++V ++++ D GI+T++D+ V AR L+ +TP VMT NP + + L
Sbjct: 37 MYEKKVGSVVVVDEEGKPVGIITERDMVY-VCARGLS-PDTPAWMVMTENPVTINENALV 94
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAI 97
EA++KM Q RHLPVV++ G+++ ++ L A+
Sbjct: 95 TEAMEKMRQLDIRHLPVVDSTGKLVGIISFRDVLDTAL 132
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 169 KMLELRLSSAVVT-VENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTP 227
+M E ++ S VV E KP GI+T +D++ V ++ L D T VMT NP +
Sbjct: 36 RMYEKKVGSVVVVDEEGKPVGIITERDMVY-VCARGLSPD-TPAWMVMTENPVTINENAL 93
Query: 228 IVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
+ +A+ M HLPVVD G +V ++
Sbjct: 94 VTEAMEKMRQLDIRHLPVVDSTGKLVGII 122
>gi|284049013|ref|YP_003399352.1| KpsF/GutQ family protein [Acidaminococcus fermentans DSM 20731]
gi|283953234|gb|ADB48037.1| KpsF/GutQ family protein [Acidaminococcus fermentans DSM 20731]
Length = 321
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 4 RRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEA 63
+ V A+ + D + L G+LTD DI R IAR+L+ PVS++MT+NP + LA EA
Sbjct: 224 KGVGAVSVVDEDQHLQGLLTDGDI-RRGIARDLDCLNRPVSQMMTKNPKTIQDHKLAAEA 282
Query: 64 LQKMVQGKFRH---LPVVE-NGEVIALLDIAKCLYDAI 97
L M K R LPVV+ + +V+ LL I ++ +
Sbjct: 283 LHLMESNKPRPITVLPVVDKDRKVVGLLHITDLVHQGV 320
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 157 ISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMT 216
IS D + + T K + + +VV + +G+LT DI R I+++L + V ++MT
Sbjct: 212 ISVKDALFIITDKGVG---AVSVVDEDQHLQGLLTDGDI-RRGIARDLDCLNRPVSQMMT 267
Query: 217 PNPECATIDTPIVDALHIMHDGK---FLHLPVVDRDGDVVDVVDVIHITHAAV 266
NP+ +ALH+M K LPVVD+D VV ++ + + H V
Sbjct: 268 KNPKTIQDHKLAAEALHLMESNKPRPITVLPVVDKDRKVVGLLHITDLVHQGV 320
>gi|126462989|ref|YP_001044103.1| cyclic nucleotide-binding protein [Rhodobacter sphaeroides ATCC
17029]
gi|126104653|gb|ABN77331.1| cyclic nucleotide-binding protein [Rhodobacter sphaeroides ATCC
17029]
Length = 606
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 6 VDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQ 65
V +L + + +A L GI+T +D+ +V+A L+ TPV++VMTR+P + + L + L
Sbjct: 172 VSSLGVVEGSAFL-GIVTTRDMTNKVVATGLD-PSTPVAEVMTRDPIALAPEALGSDILH 229
Query: 66 KMVQGKFRHLPVVENGEVIALL 87
M++ + HLPVVE G ++ ++
Sbjct: 230 VMLERRIGHLPVVEEGRLVGMI 251
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
K VT P +T+ A KM + +SS V + GI+T++D+ +V++ L ST V
Sbjct: 150 KPVTCGPAETIRAAAMKMRDAGVSSLGVVEGSAFLGIVTTRDMTNKVVATGLDP-STPVA 208
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHIT 262
+VMT +P + D LH+M + + HLPVV+ +G +V ++ +T
Sbjct: 209 EVMTRDPIALAPEALGSDILHVMLERRIGHLPVVE-EGRLVGMITQTDLT 257
>gi|449019275|dbj|BAM82677.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 312
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 13/135 (9%)
Query: 147 IIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVE----------NKPRGILTSKDIL 196
I + + TISP TV A +KM+ + AV VE + GI T +D L
Sbjct: 120 IQSQPRRAYTISPESTVFEAVQKMVAHNVG-AVAVVEPDANDAARQAQRLVGIFTERDYL 178
Query: 197 MRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDR--DGDVVD 254
++I + + +T + +VMT +P C T + DALH+M + HLPV++ +G ++
Sbjct: 179 RKIIVASKASKTTPIAEVMTQDPVCVTPQQRVGDALHLMTELDIRHLPVLESLPNGSLLT 238
Query: 255 VVDVIHITHAAVATE 269
+V + + A+
Sbjct: 239 MVSMRQLMREVAASH 253
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPV 77
L GI T++D ++I + TP+++VMT++P V +AL M + RHLPV
Sbjct: 168 LVGIFTERDYLRKIIVASKASKTTPIAEVMTQDPVCVTPQQRVGDALHLMTELDIRHLPV 227
Query: 78 VE---NGEVIALLDIAKCLYDAIARMER 102
+E NG ++ ++ + + + + A E+
Sbjct: 228 LESLPNGSLLTMVSMRQLMREVAASHEK 255
>gi|336312034|ref|ZP_08566989.1| putative signal-transduction protein [Shewanella sp. HN-41]
gi|335864290|gb|EGM69382.1| putative signal-transduction protein [Shewanella sp. HN-41]
Length = 615
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RV +LL+ D N L GILTDKD+ RV+A L+ V + MT +P + S+ L
Sbjct: 176 MRNARVSSLLVID-NHKLVGILTDKDLRNRVLAAGLD-GHLAVHQAMTVSPVSISSNALI 233
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
EA+ M + HLP+++ G+ I ++
Sbjct: 234 FEAMLLMSEYNIHHLPIIDEGKAIGMV 260
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL- 210
S + I +V A M R+SS +V +K GILT KD+ RV++ L D L
Sbjct: 158 SDPIMIDAHASVTQAALLMRNARVSSLLVIDNHKLVGILTDKDLRNRVLAAGL--DGHLA 215
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEI 270
V + MT +P + + I +A+ +M + HLP++D +G + +V I + +
Sbjct: 216 VHQAMTVSPVSISSNALIFEAMLLMSEYNIHHLPIID-EGKAIGMVTSTDILRGQGSQPL 274
Query: 271 LL-DQIMRQQ 279
LL +I RQQ
Sbjct: 275 LLIGEIERQQ 284
>gi|365539244|ref|ZP_09364419.1| Arabinose-5-phosphate isomerase [Vibrio ordalii ATCC 33509]
Length = 324
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 13 DSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKF 72
DSN L GI TD D+ R++ + +++ +S+VMT+NPT + LAVE L M +
Sbjct: 240 DSNMQLIGIFTDGDL-RRILDKRIDIHSATISEVMTQNPTVANPNMLAVEGLNLMQDKRI 298
Query: 73 RHLPVVENGEVIALLDI 89
L + ENG ++ L++
Sbjct: 299 NGLMLCENGTLVGALNM 315
>gi|225174297|ref|ZP_03728296.1| putative signal transduction protein with CBS domains [Dethiobacter
alkaliphilus AHT 1]
gi|225170082|gb|EEG78877.1| putative signal transduction protein with CBS domains [Dethiobacter
alkaliphilus AHT 1]
Length = 146
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 15 NALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRH 74
N L GI+TD+DI R A +N TPVS+ M+ + F S+ E M Q + R
Sbjct: 42 NGQLKGIVTDRDITIRSTAGGVNAN-TPVSQCMSTDVKFATSNMDVHEVANLMSQHQIRR 100
Query: 75 LPVVENGEVIALLDIAKCLYDAIARME 101
LPVVEN +++ ++ I ++I + E
Sbjct: 101 LPVVENNQLVGMVAIGDLAEESIYKNE 127
>gi|221209739|ref|ZP_03582720.1| CBS domain protein [Burkholderia multivorans CGD1]
gi|221170427|gb|EEE02893.1| CBS domain protein [Burkholderia multivorans CGD1]
Length = 149
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ + + ALL+ D + + GI+T++D A +V+ ++ + + T V ++MT +V +
Sbjct: 31 MSDKGIGALLVMDGDDI-AGIVTERDYARKVVLQDRSSKATRVEEIMTTKVRYVEPSQTS 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
E + M + + RHLPV+++G++I L+ I + IA
Sbjct: 90 DECMALMTEHRMRHLPVLDDGKLIGLVSIGDLVKSVIA 127
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+ T+ TD V A K M + + + +V + GI+T +D +V+ Q+ + +T VE+
Sbjct: 15 IYTVKKTDLVYDAIKLMSDKGIGALLVMDGDDIAGIVTERDYARKVVLQDRSSKATRVEE 74
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
+MT + + +M + + HLPV+D DG ++ +V + + + +A +
Sbjct: 75 IMTTKVRYVEPSQTSDECMALMTEHRMRHLPVLD-DGKLIGLVSIGDLVKSVIADQ 129
>gi|163746629|ref|ZP_02153986.1| CBS domain protein [Oceanibulbus indolifex HEL-45]
gi|161379743|gb|EDQ04155.1| CBS domain protein [Oceanibulbus indolifex HEL-45]
Length = 144
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A +R+ L+++ GIL+++DI + + + V +MT D +
Sbjct: 31 LAEKRIGTLVISADGKTPDGILSERDIVRELGRQGAGCLQQTVESIMTTKLVTCSRDDRS 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGV 117
LQKM G+FRH+PV+ENGE++ L+ + + + ME + EK A+EG+
Sbjct: 91 DAILQKMTDGRFRHMPVLENGELVGLISLGDVVKAQL--MELSMEK-----QALEGM 140
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 7/129 (5%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENK-PRGILTSKDILMRVISQNLPADSTLV 211
KVVT P + A + E R+ + V++ + K P GIL+ +DI+ + Q V
Sbjct: 14 KVVTTKPGLAISEAAAMLAEKRIGTLVISADGKTPDGILSERDIVRELGRQGAGCLQQTV 73
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEIL 271
E +MT + D L M DG+F H+PV++ +G++V ++ + + A L
Sbjct: 74 ESIMTTKLVTCSRDDRSDAILQKMTDGRFRHMPVLE-NGELVGLISLGDVVKAQ-----L 127
Query: 272 LDQIMRQQA 280
++ M +QA
Sbjct: 128 MELSMEKQA 136
>gi|226952931|ref|ZP_03823395.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
gi|226836252|gb|EEH68635.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
Length = 143
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 2/128 (1%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL 210
+ V TISP TVL A K M + + + VV + K GI + +D ++ ++STL
Sbjct: 13 EQSVFTISPNSTVLEAIKIMADKGVGALVVAEDEKVIGIFSERDYTRKIALMERSSNSTL 72
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE- 269
V +MT +++ + + L +M D HLPV++ D +V + + + AA+ +
Sbjct: 73 VADIMTSKVITVSLNNTVEECLQLMTDRHLRHLPVLEND-KLVGFISIGDLVKAAMEDQR 131
Query: 270 ILLDQIMR 277
IL++Q+ +
Sbjct: 132 ILIEQLQQ 139
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + V AL++ + ++ GI +++D ++ E + T V+ +MT V +
Sbjct: 32 MADKGVGALVVAEDEKVI-GIFSERDYTRKIALMERSSNSTLVADIMTSKVITVSLNNTV 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIA 90
E LQ M RHLPV+EN +++ + I
Sbjct: 91 EECLQLMTDRHLRHLPVLENDKLVGFISIG 120
>gi|297202261|ref|ZP_06919658.1| signal-transduction protein [Streptomyces sviceus ATCC 29083]
gi|197710222|gb|EDY54256.1| signal-transduction protein [Streptomyces sviceus ATCC 29083]
Length = 136
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 12/107 (11%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRV-IARELNLEET---PVSKVMTRNPTFVLS 56
M+ARRV A ++ D + GILT++DI V + + + E + V+ PT+ L
Sbjct: 27 MSARRVGAAVVLDPDGTGIGILTERDILNSVGLGQNPDTEHAHAHTTTDVVFATPTWTLE 86
Query: 57 DTLAVEALQKMVQGKFRHLPVVENGE---VIALLDIAKCLYDAIARM 100
EA Q M G FRHL V+++GE ++++ DI +C A R+
Sbjct: 87 -----EAAQAMAHGGFRHLIVLDHGEPTGIVSVRDIIRCWAPAPQRV 128
>gi|312602131|ref|YP_004021976.1| CBS domain containing protein [Burkholderia rhizoxinica HKI 454]
gi|312169445|emb|CBW76457.1| CBS domain containing protein [Burkholderia rhizoxinica HKI 454]
Length = 185
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA +++ AL++T+ N + GI+T++D A +++ + + + T V +MTR+ +V + A
Sbjct: 71 MAEKQIGALVVTE-NGKIVGIVTERDYARKIVLMDRSSKATAVRDIMTRDVRYVRPEDSA 129
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIA 90
+ + + + RHLPV++ G ++ ++ I
Sbjct: 130 QGCMALVTEHRMRHLPVIDGGRLVGMISIG 159
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
V TI + V A K+M E ++ + VVT K GI+T +D +++ + + +T V
Sbjct: 55 VYTIDASALVYDAMKRMAEKQIGALVVTENGKIVGIVTERDYARKIVLMDRSSKATAVRD 114
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+MT + + + ++ + + HLPV+D G +V ++ +
Sbjct: 115 IMTRDVRYVRPEDSAQGCMALVTEHRMRHLPVID-GGRLVGMISI 158
>gi|222148627|ref|YP_002549584.1| hypothetical protein Avi_2203 [Agrobacterium vitis S4]
gi|221735613|gb|ACM36576.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 144
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 5 RVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEAL 64
++ A+++ + + GI T++D+A+ + + PVSK MT N F S+ V L
Sbjct: 36 KIGAVVVVGMESRIVGIFTERDLASAIGKGGVEALSMPVSKAMTAN-VFRCSEETTVNQL 94
Query: 65 QKMVQGK-FRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113
+M+ K FRH+PV + G++I ++ I + I +E AE KA A
Sbjct: 95 MEMMSSKRFRHVPVEDGGKLIGIVSIGDVVKQRIREVELEAEHIKAYIAG 144
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 143 SLSTIIPEKSK-VVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILMRVI 200
++ I+ EK + V+T+ PT ++ A K + ++ + VV +E++ GI T +D+ +
Sbjct: 4 TVRNILSEKGRDVITVGPTVSLAEAAKVLHHNKIGAVVVVGMESRIVGIFTERDLASAIG 63
Query: 201 SQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+ A S V K MT N + +T + + +M +F H+PV D G ++ +V +
Sbjct: 64 KGGVEALSMPVSKAMTANVFRCSEETTVNQLMEMMSSKRFRHVPVED-GGKLIGIVSI 120
>gi|221196034|ref|ZP_03569081.1| CBS domain protein [Burkholderia multivorans CGD2M]
gi|221202708|ref|ZP_03575727.1| CBS domain protein [Burkholderia multivorans CGD2]
gi|221176642|gb|EEE09070.1| CBS domain protein [Burkholderia multivorans CGD2]
gi|221182588|gb|EEE14988.1| CBS domain protein [Burkholderia multivorans CGD2M]
Length = 149
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ + + ALL+ D + + GI+T++D A +V+ ++ + + T V ++MT +V +
Sbjct: 31 MSDKGIGALLVMDGDDI-AGIVTERDYARKVVLQDRSSKATRVEEIMTTKVRYVEPSQTS 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
E + M + + RHLPV+++G++I L+ I + IA
Sbjct: 90 DECMALMTEHRMRHLPVLDDGKLIGLVSIGDLVKSVIA 127
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+ T++ TD V A K M + + + +V + GI+T +D +V+ Q+ + +T VE+
Sbjct: 15 IYTVTKTDLVYDAIKLMSDKGIGALLVMDGDDIAGIVTERDYARKVVLQDRSSKATRVEE 74
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
+MT + + +M + + HLPV+D DG ++ +V + + + +A +
Sbjct: 75 IMTTKVRYVEPSQTSDECMALMTEHRMRHLPVLD-DGKLIGLVSIGDLVKSVIADQ 129
>gi|387905594|ref|YP_006335932.1| Inosine-5'-monophosphate dehydrogenase [Burkholderia sp. KJ006]
gi|387580486|gb|AFJ89201.1| Inosine-5'-monophosphate dehydrogenase [Burkholderia sp. KJ006]
Length = 153
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+ + + + GI+T++D A +V+ ++ + + T V ++MT +V +
Sbjct: 35 MAEKGIGALLVMEGDEI-AGIVTERDYARKVVLQDRSSKATRVDEIMTSKVRYVEPSQSS 93
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
E + M + + RHLPV++ G++I L+ I + IA
Sbjct: 94 DECMALMTEHRMRHLPVLDGGKLIGLISIGDLVKSVIA 131
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+ T++ D V A K M E + + +V ++ GI+T +D +V+ Q+ + +T V++
Sbjct: 19 IYTVTKADFVYDAVKLMAEKGIGALLVMEGDEIAGIVTERDYARKVVLQDRSSKATRVDE 78
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
+MT + + +M + + HLPV+D G ++ ++ + + + +A +
Sbjct: 79 IMTSKVRYVEPSQSSDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIADQ 133
>gi|167631117|ref|YP_001681616.1| cbs domain protein [Heliobacterium modesticaldum Ice1]
gi|167593857|gb|ABZ85605.1| cbs domain protein, putative [Heliobacterium modesticaldum Ice1]
Length = 142
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
V + P +T++ A K M+ L + + V K GI+T +DI++RV+++ + T ++
Sbjct: 12 VSAVRPDETIIEAAKIMMRLNVGAVPVVEGQKCVGIITDRDIVLRVVAKGMDPRGTTIQS 71
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
MT +P T D I A +M D + LP+++ D
Sbjct: 72 AMTKDPITGTPDMDIHAAADLMSDRQIRRLPIIEND 107
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%)
Query: 20 GILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE 79
GI+TD+DI RV+A+ ++ T + MT++P D A M + R LP++E
Sbjct: 46 GIITDRDIVLRVVAKGMDPRGTTIQSAMTKDPITGTPDMDIHAAADLMSDRQIRRLPIIE 105
Query: 80 NGEVIALLDIAKCLYDAIARMERAAEKGK 108
N ++ ++ + I R E G+
Sbjct: 106 NDRLVGIVSLGDLAVTNIYRNEAGDALGE 134
>gi|421471493|ref|ZP_15919777.1| CBS domain protein [Burkholderia multivorans ATCC BAA-247]
gi|400225423|gb|EJO55591.1| CBS domain protein [Burkholderia multivorans ATCC BAA-247]
Length = 153
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ + + ALL+ D + + GI+T++D A +V+ ++ + + T V ++MT +V +
Sbjct: 35 MSDKGIGALLVMDGDDI-AGIVTERDYARKVVLQDRSSKATRVEEIMTTKVRYVEPSQTS 93
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
E + M + + RHLPV+++G++I L+ I + IA
Sbjct: 94 DECMALMTEHRMRHLPVLDDGKLIGLVSIGDLVKSVIA 131
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+ T++ TD V A K M + + + +V + GI+T +D +V+ Q+ + +T VE+
Sbjct: 19 IYTVTKTDLVYDAIKLMSDKGIGALLVMDGDDIAGIVTERDYARKVVLQDRSSKATRVEE 78
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
+MT + + +M + + HLPV+D DG ++ +V + + + +A +
Sbjct: 79 IMTTKVRYVEPSQTSDECMALMTEHRMRHLPVLD-DGKLIGLVSIGDLVKSVIADQ 133
>gi|206563771|ref|YP_002234534.1| hypothetical protein BCAM1926 [Burkholderia cenocepacia J2315]
gi|421867786|ref|ZP_16299439.1| CBS domain protein [Burkholderia cenocepacia H111]
gi|444360972|ref|ZP_21162128.1| CBS domain protein [Burkholderia cenocepacia BC7]
gi|444366723|ref|ZP_21166740.1| CBS domain protein [Burkholderia cenocepacia K56-2Valvano]
gi|198039811|emb|CAR55785.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
gi|358072199|emb|CCE50317.1| CBS domain protein [Burkholderia cenocepacia H111]
gi|443598832|gb|ELT67156.1| CBS domain protein [Burkholderia cenocepacia BC7]
gi|443604077|gb|ELT72039.1| CBS domain protein [Burkholderia cenocepacia K56-2Valvano]
Length = 153
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+ D + + GI+T++D A +V+ ++ + + T V ++MT +V
Sbjct: 35 MAEKGIGALLVVDGDDI-AGIVTERDYARKVVLQDRSSKATRVEEIMTAKVRYVEPSQST 93
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
E + M + + RHLPV++ G+++ L+ I + IA
Sbjct: 94 DECMALMTEHRMRHLPVLDGGKLVGLISIGDLVKSVIA 131
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+ T++ +D V A K M E + + +V + GI+T +D +V+ Q+ + +T VE+
Sbjct: 19 IYTVTKSDFVYDAIKLMAEKGIGALLVVDGDDIAGIVTERDYARKVVLQDRSSKATRVEE 78
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
+MT + + +M + + HLPV+D G +V ++ + + + +A +
Sbjct: 79 IMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLVGLISIGDLVKSVIADQ 133
>gi|134293948|ref|YP_001117684.1| signal-transduction protein [Burkholderia vietnamiensis G4]
gi|134137105|gb|ABO58219.1| putative signal-transduction protein with CBS domains [Burkholderia
vietnamiensis G4]
Length = 153
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+ + + + GI+T++D A +V+ ++ + + T V ++MT +V +
Sbjct: 35 MAEKGIGALLVMEGDEI-AGIVTERDYARKVVLQDRSSKATRVDEIMTSKVRYVEPSQSS 93
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
E + M + + RHLPV++ G++I L+ I + IA
Sbjct: 94 DECMALMTEHRMRHLPVLDGGKLIGLISIGDLVKSVIA 131
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+ T++ D V A K M E + + +V ++ GI+T +D +V+ Q+ + +T V++
Sbjct: 19 IYTVTKADFVYDAVKLMAEKGIGALLVMEGDEIAGIVTERDYARKVVLQDRSSKATRVDE 78
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
+MT + + +M + + HLPV+D G ++ ++ + + + +A +
Sbjct: 79 IMTSKVRYVEPSQSSDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIADQ 133
>gi|398938330|ref|ZP_10667733.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM41(2012)]
gi|398165878|gb|EJM53988.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM41(2012)]
Length = 146
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+ V AL + N + GI++++D A +++ + + TPV +M +P +
Sbjct: 34 MAAKNVGALPVL-RNGEVVGIISERDYARKLVLKGRSSVGTPVEDIMV-SPVITVDTHQT 91
Query: 61 VEALQKMVQGK-FRHLPVVENGEVIALLDIAKCLYDAIA 98
VE ++ K RHLPVVENG++I LL I + +AIA
Sbjct: 92 VETCMGIMSDKRLRHLPVVENGQLIGLLSIGDLVKEAIA 130
>gi|182411839|ref|YP_001816905.1| signal-transduction protein [Opitutus terrae PB90-1]
gi|177839053|gb|ACB73305.1| putative signal-transduction protein with CBS domains [Opitutus
terrae PB90-1]
Length = 147
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 59/98 (60%), Gaps = 4/98 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M R+ ++++ ++++ + GI T++D+ RV+ ++ + TPV++VMT P + +T
Sbjct: 32 MNRHRIGSIVVLENSSPI-GIFTERDVLRRVVGEGVDPKRTPVNQVMTARPITITPETTI 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL---DIAKCLYD 95
+ + + RHLPV+ NG+++ L+ DI++ + D
Sbjct: 91 EQTMTLFAEKNCRHLPVLVNGKLVGLISIGDISRWMAD 128
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 2/120 (1%)
Query: 144 LSTIIPEKSKVVTISPTD-TVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQ 202
+S ++ K VV P++ TV A +M R+ S VV + P GI T +D+L RV+ +
Sbjct: 5 ISALLDRKGSVVFSVPSNVTVCDAVNEMNRHRIGSIVVLENSSPIGIFTERDVLRRVVGE 64
Query: 203 NLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHIT 262
+ T V +VMT P T +T I + + + HLPV+ +G +V ++ + I+
Sbjct: 65 GVDPKRTPVNQVMTARPITITPETTIEQTMTLFAEKNCRHLPVL-VNGKLVGLISIGDIS 123
>gi|386817222|ref|ZP_10104440.1| putative signal transduction protein with CBS domains [Thiothrix
nivea DSM 5205]
gi|386421798|gb|EIJ35633.1| putative signal transduction protein with CBS domains [Thiothrix
nivea DSM 5205]
Length = 142
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 77/137 (56%), Gaps = 3/137 (2%)
Query: 143 SLSTIIPEK-SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVIS 201
++S ++ K S+V +++P V+ A K M E R+ + +V K +GI++ +D +++
Sbjct: 3 TISQVLARKGSEVYSVAPAARVIEAVKTMAEKRVGALLVLDNGKLKGIISEQDYTRKIVL 62
Query: 202 QNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHI 261
++ A+ V++ MT C T + I D + IM D + HLPV+ G+++ +V + +
Sbjct: 63 RDRIAEHLRVDEAMTSPVVCITPEHSIQDGMAIMTDKRIRHLPVM-AGGELLGLVSIGDL 121
Query: 262 THAAVA-TEILLDQIMR 277
++ + ++DQ+++
Sbjct: 122 VKEVISEQQFMIDQLVQ 138
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 11/106 (10%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARE-----LNLEETPVSKVMTRNPTFVL 55
MA +RV ALL+ D N L GI++++D +++ R+ L ++E S V+ P +
Sbjct: 31 MAEKRVGALLVLD-NGKLKGIISEQDYTRKIVLRDRIAEHLRVDEAMTSPVVCITPEHSI 89
Query: 56 SDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
D +A+ M + RHLPV+ GE++ L+ I + + I+ +
Sbjct: 90 QDGMAI-----MTDKRIRHLPVMAGGELLGLVSIGDLVKEVISEQQ 130
>gi|347524362|ref|YP_004781932.1| CBS domain containing protein [Pyrolobus fumarii 1A]
gi|343461244|gb|AEM39680.1| CBS domain containing protein [Pyrolobus fumarii 1A]
Length = 305
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 90/212 (42%), Gaps = 43/212 (20%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + L + + + GI+T+ DI R+I + + V +VM++N +
Sbjct: 128 MVVHNIGVLPVVLPDGRVYGIITEHDIVERLIEKNVGRR---VEEVMSKNVVTIDKRATV 184
Query: 61 VEALQKMVQGKFRHLPVV--ENGEVIALL---DIAKCL--YDAIARMERAAEKGKAIAAA 113
EA + MV+ FR LP+V E GE+ ++ DI + +DA + A GK A
Sbjct: 185 KEAAETMVKFGFRRLPIVDEETGEIWGMITAKDIVRYFGRHDAFSN----APSGKMSEA- 239
Query: 114 VEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLEL 173
+S P T + T + TI P V A KM+E
Sbjct: 240 -----------LSVPVTLVGT-----------------KEFYTIEPEADVGEAATKMMER 271
Query: 174 RLSSAVVTVENKPRGILTSKDILMRVISQNLP 205
++SS +V + K GI+T +DIL V + P
Sbjct: 272 KVSSLLVVKDGKLVGIITERDILFAVATAKSP 303
>gi|397780720|ref|YP_006545193.1| hypothetical protein BN140_1554 [Methanoculleus bourgensis MS2]
gi|396939222|emb|CCJ36477.1| putative protein MK0525 AltName: Full=OrfX [Methanoculleus
bourgensis MS2]
Length = 150
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 64/111 (57%), Gaps = 6/111 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + V ++++ + G++TD+D+A RV+A+E N E ++TR+ D++
Sbjct: 27 MGEKNVGSVVIVTGDNRPVGVITDRDLAVRVMAQERNPGEVRAGDIVTRD-VITFRDSMG 85
Query: 61 V-EALQKMVQGKFRHLPVVEN-GEVIALL---DIAKCLYDAIARMERAAEK 106
V EA+QKM R +PVV++ G++I ++ DI + L + +A + + EK
Sbjct: 86 VYEAIQKMTAEGIRRMPVVDDAGKLIGIVTMDDIIRMLGEEMAAIAKNIEK 136
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAV-VTVENKPRGILTSKDILMRVISQNLPADST 209
+ +VV +SP + + M E + S V VT +N+P G++T +D+ +RV++Q
Sbjct: 8 REQVVAVSPDTPAVEVARIMGEKNVGSVVIVTGDNRPVGVITDRDLAVRVMAQERNPGEV 67
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV---DVIHITH--- 263
++T + + +A+ M +PVVD G ++ +V D+I +
Sbjct: 68 RAGDIVTRDVITFRDSMGVYEAIQKMTAEGIRRMPVVDDAGKLIGIVTMDDIIRMLGEEM 127
Query: 264 AAVATEI 270
AA+A I
Sbjct: 128 AAIAKNI 134
>gi|392545560|ref|ZP_10292697.1| hypothetical protein PrubA2_04272 [Pseudoalteromonas rubra ATCC
29570]
Length = 631
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 13 DSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKF 72
D + + GIL+DKD+ +V+A +L+ + PV+ +MTR T V S+ EA+ M++
Sbjct: 199 DDDGQIVGILSDKDLRIKVVAEDLDTNQ-PVATIMTRELTIVDSNAYVFEAMMMMLRDNL 257
Query: 73 RHLPVVENGE---VIALLDIAK 91
HLPVV VIAL DI +
Sbjct: 258 HHLPVVHKRRPIGVIALSDILR 279
>gi|302348762|ref|YP_003816400.1| Signaling protein with a cAMP-binding, CBS domains and
nucleotidyltransferase domain [Acidilobus saccharovorans
345-15]
gi|302329174|gb|ADL19369.1| Signaling protein with a cAMP-binding, CBS domains and predicted
nucleotidyltransferase domain [Acidilobus saccharovorans
345-15]
Length = 147
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + V +L++ D + L GI+T DI V+A+ L+ PV +MT+NP FVL D
Sbjct: 34 MMDKGVGSLIIVDDSDNLIGIVTKTDIVREVVAKGLS-RNVPVGNIMTKNPYFVLEDYTV 92
Query: 61 VEALQKMVQGKFRHLPVV 78
EA + M HLPV+
Sbjct: 93 KEAAELMGTHNIGHLPVL 110
>gi|78061876|ref|YP_371784.1| signal-transduction protein [Burkholderia sp. 383]
gi|77969761|gb|ABB11140.1| putative signal-transduction protein with CBS domains [Burkholderia
sp. 383]
Length = 153
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+ D + + GI+T++D A +V+ ++ + + T V ++MT +V
Sbjct: 35 MAEKGIGALLVVDGDDI-AGIVTERDYARKVVLQDRSSKATRVEEIMTAKVRYVEPSQST 93
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
E + M + + RHLPV++ G+++ L+ I + IA
Sbjct: 94 DECMALMTEHRMRHLPVLDGGKLVGLISIGDLVKSVIA 131
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+ T++ TD V A K M E + + +V + GI+T +D +V+ Q+ + +T VE+
Sbjct: 19 IYTVTKTDLVYDAIKLMAEKGIGALLVVDGDDIAGIVTERDYARKVVLQDRSSKATRVEE 78
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
+MT + + +M + + HLPV+D G +V ++ + + + +A +
Sbjct: 79 IMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLVGLISIGDLVKSVIADQ 133
>gi|254247192|ref|ZP_04940513.1| KpsF/GutQ [Burkholderia cenocepacia PC184]
gi|124871968|gb|EAY63684.1| KpsF/GutQ [Burkholderia cenocepacia PC184]
Length = 413
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 3 ARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVE 62
A+R+ + D++ + GI TD D+ RV+AR+ + P+++VMTR+P + D LAVE
Sbjct: 318 AKRLGMTAVVDADGKVAGIFTDGDL-RRVLARDGDFRTLPITEVMTRDPRTIAPDHLAVE 376
Query: 63 ALQKMVQGKFRHLPVVE-NGEVIALLDI 89
A++ M + + + VV+ +G +I L++
Sbjct: 377 AVELMERHRINQMLVVDADGALIGALNM 404
>gi|84514689|ref|ZP_01002053.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Loktanella vestfoldensis SKA53]
gi|84511740|gb|EAQ08193.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Loktanella vestfoldensis SKA53]
Length = 611
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL-VEK 213
VT S DT+ K M + R+S V + GI+T DI RV+++ L D+ L V +
Sbjct: 157 VTCSADDTITAIAKLMRQYRISCLPVMAGTRLAGIVTLHDINNRVVAEGL--DTGLPVSR 214
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDR 248
+MT NPE D LH+M + +F H+P+VD+
Sbjct: 215 IMTANPETLPPSAIGSDVLHMMMERRFGHVPIVDQ 249
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPV 77
L GI+T DI RV+A L+ PVS++MT NP + + + L M++ +F H+P+
Sbjct: 188 LAGIVTLHDINNRVVAEGLD-TGLPVSRIMTANPETLPPSAIGSDVLHMMMERRFGHVPI 246
Query: 78 VENGEVIALL 87
V+ ++ ++
Sbjct: 247 VDQCRLVGIV 256
>gi|449068365|ref|YP_007435446.1| hypothetical protein SacRon12I_00210 [Sulfolobus acidocaldarius
Ron12/I]
gi|449036873|gb|AGE72298.1| hypothetical protein SacRon12I_00210 [Sulfolobus acidocaldarius
Ron12/I]
Length = 150
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 66/125 (52%), Gaps = 10/125 (8%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + +L++ D+ + GI+T++D+ R IA E N+ T VS MTRN V +
Sbjct: 15 MKKHNIGSLIVIDNRGKVSGIITERDL-VRAIA-EGNINST-VSNYMTRNVIGVTENFDP 71
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALL---DIAKCLYDA---IARMERAAEKGKAIAAA 113
+ALQ M+ FRHLP++ ++G V +L D+A+ L D E +G IA
Sbjct: 72 NQALQVMLDHGFRHLPIIGKDGRVKGILSIRDLARTLIDPHYLTYGKEPEEVRGTGIACP 131
Query: 114 VEGVE 118
V GVE
Sbjct: 132 VCGVE 136
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Query: 157 ISPTDTVLMATKKMLELRLSSAVVTVENKPR--GILTSKDILMRVISQNLPADSTLVEKV 214
I D+V A ++M + + S +V ++N+ + GI+T +D++ + N+ ++ V
Sbjct: 2 IREDDSVRFAAEEMKKHNIGSLIV-IDNRGKVSGIITERDLVRAIAEGNI---NSTVSNY 57
Query: 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
MT N T + AL +M D F HLP++ +DG V ++ +
Sbjct: 58 MTRNVIGVTENFDPNQALQVMLDHGFRHLPIIGKDGRVKGILSI 101
>gi|398880462|ref|ZP_10635507.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM67]
gi|398886794|ref|ZP_10641650.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM60]
gi|398994575|ref|ZP_10697474.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM21]
gi|407363979|ref|ZP_11110511.1| signal transduction protein [Pseudomonas mandelii JR-1]
gi|398131896|gb|EJM21192.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM21]
gi|398188021|gb|EJM75340.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM60]
gi|398192664|gb|EJM79804.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM67]
Length = 146
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 3/99 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + V ALL+ +++ +L GI++++D A +++ + TPV +M +P +
Sbjct: 34 MAEKNVGALLVVENDEVL-GIISERDYARKLVLHGRSSVGTPVRDIMV-SPVITVDTHQT 91
Query: 61 VE-ALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
V+ L M + RHLPVVENG++I LL I + +AIA
Sbjct: 92 VDTCLGIMSDRRLRHLPVVENGKLIGLLSIGDLVKEAIA 130
Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
Query: 150 EKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVI-----SQNL 204
+ +V I P VL A KM E + + +V ++ GI++ +D +++ S
Sbjct: 14 KNQEVHQIKPDHMVLEALMKMAEKNVGALLVVENDEVLGIISERDYARKLVLHGRSSVGT 73
Query: 205 PADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
P +V V+T + T+DT L IM D + HLPVV+ +G ++ ++ + +
Sbjct: 74 PVRDIMVSPVITVDTH-QTVDT----CLGIMSDRRLRHLPVVE-NGKLIGLLSIGDLVKE 127
Query: 265 AVATEILLDQIMRQQAQ 281
A+A + +++RQ Q
Sbjct: 128 AIAEQA---ELIRQLEQ 141
>gi|188590819|ref|YP_001795419.1| hypothetical protein RALTA_A0024 [Cupriavidus taiwanensis LMG
19424]
gi|170937713|emb|CAP62697.1| conserved hypothetical protein, CBS domain [Cupriavidus taiwanensis
LMG 19424]
Length = 146
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+ + + GIL+++D A +VI + ET V +MT +V ++
Sbjct: 32 MAEKGIGALLVIEHGEI-KGILSERDYARKVILMQRTSRETLVRDIMTTAVIYVSANQTT 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEK 106
E + M + + RHLPV+E ++I +L I + D I+ + E+
Sbjct: 91 DECMALMTRHRLRHLPVMEGNQLIGMLSIGDLVKDIISEQQFIIEQ 136
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+ +I PT TV A + M E + + +V + +GIL+ +D +VI + TLV
Sbjct: 16 IYSIPPTATVYAALQLMAEKGIGALLVIEHGEIKGILSERDYARKVILMQRTSRETLVRD 75
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
+MT + + + + +M + HLPV++
Sbjct: 76 IMTTAVIYVSANQTTDECMALMTRHRLRHLPVME 109
>gi|149914738|ref|ZP_01903268.1| Protein containing a CBS domain [Roseobacter sp. AzwK-3b]
gi|149811531|gb|EDM71366.1| Protein containing a CBS domain [Roseobacter sp. AzwK-3b]
Length = 144
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRV-IARELNLEETPVSKVMTRNPTFVLSDTL 59
+A RR+ L+++ GIL+++DI + + + L ET V +MTRNP +
Sbjct: 31 LAERRIGGLVVSKKGDTADGILSERDIVRALAVKGAVCLSET-VDGMMTRNPVCCVLQDS 89
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIA 90
+ L +M +G+FRH+PVV +G+++ ++ I
Sbjct: 90 SDSVLARMTEGRFRHMPVVTDGKLVGIVTIG 120
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVE-NKPRGILTSKDILMRVISQNLPADSTLVE 212
V+T++P V A + + E R+ VV+ + + GIL+ +DI+ + + S V+
Sbjct: 15 VITVTPGTLVSEAAQILAERRIGGLVVSKKGDTADGILSERDIVRALAVKGAVCLSETVD 74
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
+MT NP C + L M +G+F H+PVV DG +V +V + + A
Sbjct: 75 GMMTRNPVCCVLQDSSDSVLARMTEGRFRHMPVV-TDGKLVGIVTIGDVVKA 125
>gi|319794826|ref|YP_004156466.1| signal transduction protein with cbs domains [Variovorax paradoxus
EPS]
gi|315597289|gb|ADU38355.1| putative signal transduction protein with CBS domains [Variovorax
paradoxus EPS]
Length = 142
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A V AL++ D L+ G L+++D +V + N +E VS++MT + V T
Sbjct: 31 LARFEVGALMVMDGEKLV-GFLSERDYTRKVALQGKNSKEMKVSEIMTPDVMTVTPQTRT 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEK 106
+ M Q KFRHLPVV+ +V+ ++ I + D I+ E+ ++
Sbjct: 90 RACMALMSQRKFRHLPVVDGDKVVGMISIQDLMDDIISEHEQTIDQ 135
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 11/124 (8%)
Query: 158 SPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP 217
SP +V A + + + +V K G L+ +D +V Q + V ++MTP
Sbjct: 19 SPHTSVFDALATLARFEVGALMVMDGEKLVGFLSERDYTRKVALQGKNSKEMKVSEIMTP 78
Query: 218 NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILLDQIMR 277
+ T T + +M KF HLPVVD D VV +I I + L+D I+
Sbjct: 79 DVMTVTPQTRTRACMALMSQRKFRHLPVVDGD----KVVGMISI-------QDLMDDIIS 127
Query: 278 QQAQ 281
+ Q
Sbjct: 128 EHEQ 131
>gi|52550404|gb|AAU84253.1| conserved hypothetical protein [uncultured archaeon GZfos9C4]
Length = 271
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 106/250 (42%), Gaps = 47/250 (18%)
Query: 20 GILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE 79
GI+TD+DI+ ++ A + V ++M+ + + L EA + + R LPV+E
Sbjct: 45 GIVTDRDISIKICATR-RTGKVKVKEIMSSPLITIAPEALLEEACELLAANDIRRLPVME 103
Query: 80 NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERM 139
N E++ ++ + L A + R
Sbjct: 104 NDELVGIVSVRNILTRAPEHVHR------------------------------------- 126
Query: 140 FRPSLSTIIPEKSKV--------VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILT 191
F P+ ++PE+ +V +T V TK M + S V+T E+KP GI+T
Sbjct: 127 FYPAEGEVVPERLEVGDVMTLEVITEDEVTPVTKITKDMEVSGIGSVVITSEDKPVGIVT 186
Query: 192 SKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGD 251
+DI +VI ++ A +++M+ + P+ A +M + +PV++ + +
Sbjct: 187 DRDIASKVIMKDKKASEIKAKEIMSSPLITIKPEAPVEKACELMAENNIRRMPVME-NNE 245
Query: 252 VVDVVDVIHI 261
+V ++ V +I
Sbjct: 246 LVGIISVRNI 255
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 GILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVE-ALQKMVQGKFRHLPVV 78
GI+TD+DIA++VI ++ E ++M+ +P + VE A + M + R +PV+
Sbjct: 183 GIVTDRDIASKVIMKDKKASEIKAKEIMS-SPLITIKPEAPVEKACELMAENNIRRMPVM 241
Query: 79 ENGEVIALLDIAKCLYDA 96
EN E++ ++ + L A
Sbjct: 242 ENNELVGIISVRNILTRA 259
>gi|309789845|ref|ZP_07684424.1| CBS domain-containing protein [Oscillochloris trichoides DG-6]
gi|308228149|gb|EFO81798.1| CBS domain-containing protein [Oscillochloris trichoides DG6]
Length = 623
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 GILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE 79
GI TD+D+ TRV+A + TPVSKVMT + +D+L E L M++ + H+P+ E
Sbjct: 201 GIFTDRDLRTRVVAAGIPYN-TPVSKVMTTPIRTLPADSLVFEGLMAMLENRQHHMPITE 259
Query: 80 NGEVIALL 87
+G ++ ++
Sbjct: 260 HGRIVGIV 267
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVV-----TVENKPRGILTSKDILMRVISQNLPADS 208
+V ISP TV A + M + +S ++ V ++ GI T +D+ RV++ +P +
Sbjct: 162 LVAISPDATVQEAAQLMSQEHVSCLLIDLPPYGVLDQDTGIFTDRDLRTRVVAAGIPYN- 220
Query: 209 TLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHI-THAAVA 267
T V KVMT D+ + + L M + + H+P+ + G +V +V + I H + +
Sbjct: 221 TPVSKVMTTPIRTLPADSLVFEGLMAMLENRQHHMPITEH-GRIVGIVTHMAILRHQSSS 279
Query: 268 TEILLDQIMRQQ 279
L Q+ R Q
Sbjct: 280 PVFLPSQLRRAQ 291
>gi|346993348|ref|ZP_08861420.1| CBS domain-containing protein [Ruegeria sp. TW15]
Length = 174
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 53/101 (52%)
Query: 4 RRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEA 63
+R+ A+++TD N L GIL+++DI R+ V+ +MT D +
Sbjct: 65 KRIGAVVVTDQNGSLQGILSERDIVRRMAETPGQTLPQSVADLMTTEVKTCSPDDYLNDV 124
Query: 64 LQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAA 104
L+ M +G+FRH+PV+ +G + ++ I ++ + +E A
Sbjct: 125 LKTMTEGRFRHMPVLSDGNLRGVITIGDVVHFRLKELEYEA 165
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVI---SQNLPADST 209
V ++ P DT+ + E R+ + VVT +N +GIL+ +DI+ R+ Q LP
Sbjct: 46 VFSVRPNDTIHSVVDILREKRIGAVVVTDQNGSLQGILSERDIVRRMAETPGQTLPQS-- 103
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGD---VVDVVDVIHI 261
V +MT + + D + D L M +G+F H+PV+ DG+ V+ + DV+H
Sbjct: 104 -VADLMTTEVKTCSPDDYLNDVLKTMTEGRFRHMPVLS-DGNLRGVITIGDVVHF 156
>gi|422650577|ref|ZP_16713380.1| CBS domain-containing protein [Pseudomonas syringae pv. actinidiae
str. M302091]
gi|330963663|gb|EGH63923.1| CBS domain-containing protein [Pseudomonas syringae pv. actinidiae
str. M302091]
Length = 146
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + AL + + N + G+++++D A +V+ + TPVS++M+ V S
Sbjct: 34 MADKNIGALPVVE-NGTVVGVVSERDYARKVVLEGRSSVGTPVSEIMSSKVITVNSQQTV 92
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
+ M RHLPVVE+G+++ LL I + +AIA
Sbjct: 93 ETCMGIMTDSHLRHLPVVEDGQLLGLLSIGDLVKEAIA 130
>gi|330808646|ref|YP_004353108.1| hypothetical protein PSEBR_a1884 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423696482|ref|ZP_17670972.1| CBS domain protein [Pseudomonas fluorescens Q8r1-96]
gi|327376754|gb|AEA68104.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|388003923|gb|EIK65250.1| CBS domain protein [Pseudomonas fluorescens Q8r1-96]
Length = 146
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 3/99 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + V ALL+ ++ +L GI++++D A +++ R + T VS +M +P +
Sbjct: 34 MAEKNVGALLVVKNDEVL-GIISERDYARKMVLRGRSSVGTKVSDIMV-SPVITIDPHQN 91
Query: 61 VE-ALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
VE L M + RHLPVVE+G+++ LL I + +AIA
Sbjct: 92 VETCLSIMTEKHLRHLPVVEDGKLVGLLSIGDLVKEAIA 130
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 5/122 (4%)
Query: 150 EKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADST 209
+ +V TISP D VL A +M E + + +V ++ GI++ +D +++ + + T
Sbjct: 14 KNQQVHTISPDDMVLQALMRMAEKNVGALLVVKNDEVLGIISERDYARKMVLRGRSSVGT 73
Query: 210 LVEKVMTPNPECATID--TPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
V +M +P TID + L IM + HLPVV+ DG +V ++ + + A+A
Sbjct: 74 KVSDIMV-SP-VITIDPHQNVETCLSIMTEKHLRHLPVVE-DGKLVGLLSIGDLVKEAIA 130
Query: 268 TE 269
+
Sbjct: 131 EQ 132
>gi|149188400|ref|ZP_01866693.1| hypothetical protein VSAK1_20434 [Vibrio shilonii AK1]
gi|148837618|gb|EDL54562.1| hypothetical protein VSAK1_20434 [Vibrio shilonii AK1]
Length = 635
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 15 NALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRH 74
N L G++TD+D+ RVIA E + P+ VMT NP V + L + A M+Q R
Sbjct: 209 NGKLVGLMTDRDMTKRVIA-EGHDNSAPIRDVMTPNPLTVSPNDLVLHAASLMMQHNVRG 267
Query: 75 LPVVENGEVIALL 87
LPVV G V+ LL
Sbjct: 268 LPVVSEGRVVGLL 280
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Query: 174 RLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALH 233
R S+AVV K G++T +D+ RVI++ +S + VMTPNP + + ++ A
Sbjct: 200 RSSTAVVCDNGKLVGLMTDRDMTKRVIAEG-HDNSAPIRDVMTPNPLTVSPNDLVLHAAS 258
Query: 234 IMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILL 272
+M LPVV +G VV ++ H+ I L
Sbjct: 259 LMMQHNVRGLPVVS-EGRVVGLLTTSHLVQNHRMQAIFL 296
>gi|386386761|ref|ZP_10071870.1| hypothetical protein STSU_25929 [Streptomyces tsukubaensis
NRRL18488]
gi|385665769|gb|EIF89403.1| hypothetical protein STSU_25929 [Streptomyces tsukubaensis
NRRL18488]
Length = 139
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA V AL + D+ LCGILTD+DI +A + + ++ P ++ +++
Sbjct: 28 MARLDVGALPIADAQERLCGILTDRDIVVGCVALGHDPAKVTAGEMARGTPRWIAAESGV 87
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL---DIAKCLYD 95
E LQ+M + + R LPV+E +++ ++ D+A+ L D
Sbjct: 88 GEVLQEMQEHQIRRLPVIEGKKLVGMISEADLAQHLSD 125
>gi|56696685|ref|YP_167046.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding
domain-containing protein [Ruegeria pomeroyi DSS-3]
gi|56678422|gb|AAV95088.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Ruegeria pomeroyi DSS-3]
Length = 607
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 65/116 (56%), Gaps = 7/116 (6%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M AR + +L + + AL+ GILT +D++ +V+A E +TPV +VMT P + +
Sbjct: 168 MRARSISSLCVCEDGALV-GILTQRDLSGKVVA-EARSPDTPVDQVMTPAPLTLAPSAIG 225
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL---DIAKCLYDAIARMERAAEKGKAIAAA 113
+ L M++ H+P+VE G ++ ++ D+ + + A++ E + +A +AA
Sbjct: 226 SDVLHAMMERHIGHIPIVEAGRLVGMVTQTDLTR--FQAVSSAELVSRLARATSAA 279
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 136 RERMFRPSLSTIIPEKSKVV------TISPTDTVLMATKKMLELRLSSAVVTVENKPRGI 189
R R RP + ++ + + + T +P TV A ++M +SS V + GI
Sbjct: 128 RARAPRPQVQSLATSRVETLMARDPATCAPDTTVQAAAQEMRARSISSLCVCEDGALVGI 187
Query: 190 LTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
LT +D+ +V+++ D T V++VMTP P D LH M + H+P+V+
Sbjct: 188 LTQRDLSGKVVAEARSPD-TPVDQVMTPAPLTLAPSAIGSDVLHAMMERHIGHIPIVEA- 245
Query: 250 GDVVDVVDVIHITH-AAVATEILLDQIMR 277
G +V +V +T AV++ L+ ++ R
Sbjct: 246 GRLVGMVTQTDLTRFQAVSSAELVSRLAR 274
>gi|170734131|ref|YP_001766078.1| KpsF/GutQ family protein [Burkholderia cenocepacia MC0-3]
gi|206559211|ref|YP_002229972.1| putative arabinose 5-phosphate isomerase [Burkholderia cenocepacia
J2315]
gi|421870793|ref|ZP_16302422.1| Arabinose 5-phosphate isomerase [Burkholderia cenocepacia H111]
gi|444357605|ref|ZP_21159131.1| sugar isomerase, KpsF/GutQ family [Burkholderia cenocepacia BC7]
gi|444366587|ref|ZP_21166618.1| sugar isomerase, KpsF/GutQ family [Burkholderia cenocepacia
K56-2Valvano]
gi|169817373|gb|ACA91956.1| KpsF/GutQ family protein [Burkholderia cenocepacia MC0-3]
gi|198035249|emb|CAR51124.1| putative arabinose 5-phosphate isomerase [Burkholderia cenocepacia
J2315]
gi|358069122|emb|CCE53300.1| Arabinose 5-phosphate isomerase [Burkholderia cenocepacia H111]
gi|443604394|gb|ELT72332.1| sugar isomerase, KpsF/GutQ family [Burkholderia cenocepacia
K56-2Valvano]
gi|443606083|gb|ELT73887.1| sugar isomerase, KpsF/GutQ family [Burkholderia cenocepacia BC7]
Length = 327
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 3 ARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVE 62
A+R+ + D++ + GI TD D+ RV+AR+ + P+++VMTR+P + D LAVE
Sbjct: 232 AKRLGMTAVVDADGKVAGIFTDGDL-RRVLARDGDFRTLPITEVMTRDPRTIAPDHLAVE 290
Query: 63 ALQKMVQGKFRHLPVVE-NGEVIALLDI 89
A++ M + + + VV+ +G +I L++
Sbjct: 291 AVELMERHRINQMLVVDADGALIGALNM 318
>gi|120553209|ref|YP_957560.1| cyclic nucleotide-binding protein [Marinobacter aquaeolei VT8]
gi|387812658|ref|YP_005428135.1| nucleotidyltransferase [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|120323058|gb|ABM17373.1| cyclic nucleotide-binding protein [Marinobacter aquaeolei VT8]
gi|381337665|emb|CCG93712.1| Cyclic nucleotide-binding:CBS; Putative nucleotidyltransferase
DUF294CBS [Marinobacter hydrocarbonoclasticus ATCC
49840]
Length = 625
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 1 MAARRVDALLLTDSNA---LLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSD 57
M V ALLL D + L GI+TD+D+ TR + L ETP+S++M+ + +
Sbjct: 176 MTDNGVSALLLMDESGDSPRLKGIITDRDLRTRAVTNALP-SETPISEIMSEGLITISAR 234
Query: 58 TLAVEALQKMVQGKFRHLPVVENGE---VIALLDIAK 91
+ EA+ M+ HLPV+E+ E VIAL DI K
Sbjct: 235 SYIFEAMLTMLHNNVHHLPVMEDHEVRGVIALSDIVK 271
>gi|107023719|ref|YP_622046.1| KpsF/GutQ family protein [Burkholderia cenocepacia AU 1054]
gi|116690806|ref|YP_836429.1| KpsF/GutQ family protein [Burkholderia cenocepacia HI2424]
gi|105893908|gb|ABF77073.1| KpsF/GutQ family protein [Burkholderia cenocepacia AU 1054]
gi|116648895|gb|ABK09536.1| KpsF/GutQ family protein [Burkholderia cenocepacia HI2424]
Length = 327
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 3 ARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVE 62
A+R+ + D++ + GI TD D+ RV+AR+ + P+++VMTR+P + D LAVE
Sbjct: 232 AKRLGMTAVVDADGKVAGIFTDGDL-RRVLARDGDFRTLPITEVMTRDPRTIAPDHLAVE 290
Query: 63 ALQKMVQGKFRHLPVVE-NGEVIALLDI 89
A++ M + + + VV+ +G +I L++
Sbjct: 291 AVELMERHRINQMLVVDADGALIGALNM 318
>gi|443473996|ref|ZP_21064017.1| CBS domain containing protein [Pseudomonas pseudoalcaligenes KF707]
gi|442904931|gb|ELS29846.1| CBS domain containing protein [Pseudomonas pseudoalcaligenes KF707]
Length = 146
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 58/99 (58%), Gaps = 3/99 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A + + AL +T+ L+ GI++++D A R + + + TPV + MT P F ++ +
Sbjct: 32 LAEQNIGALPVTEGGRLV-GIVSERDYARRGVLQGRSSVATPVREFMT-EPVFTVNAGQS 89
Query: 61 V-EALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
+ E + M RHLPVVE+G++I LL I + +A+A
Sbjct: 90 IRECMSLMTDRHMRHLPVVEDGQLIGLLSIGDLVKEAMA 128
>gi|359781111|ref|ZP_09284336.1| hypothetical protein PPL19_08636 [Pseudomonas psychrotolerans L19]
gi|359371171|gb|EHK71737.1| hypothetical protein PPL19_08636 [Pseudomonas psychrotolerans L19]
Length = 144
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 1 MAARRVDAL-LLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTL 59
MA + V AL ++ D L GI++++D A +V + + TPVS++MT VL
Sbjct: 32 MAEKNVGALPVMRDGE--LVGIVSERDYARKVALQGRSSYATPVSEIMTEAVIIVLPQQT 89
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIA 90
+ +Q M RHLPV+ NG++I LL I
Sbjct: 90 VGDCMQMMTDHHLRHLPVMGNGKLIGLLSIG 120
>gi|397774206|ref|YP_006541752.1| CBS domain containing protein [Natrinema sp. J7-2]
gi|448341637|ref|ZP_21530595.1| CBS domain containing protein [Natrinema gari JCM 14663]
gi|397683299|gb|AFO57676.1| CBS domain containing protein [Natrinema sp. J7-2]
gi|445627565|gb|ELY80888.1| CBS domain containing protein [Natrinema gari JCM 14663]
Length = 134
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVV-TVENKPRGILTSKDILMRVISQNLPADST 209
S + T++P V A + ML+ + S VV +N+ GILT+ D +R++++ P D T
Sbjct: 11 SSSLHTVTPDTLVEDAAQDMLDNGIGSVVVIDDDNRLEGILTTTD-FVRIVAEQKPKDQT 69
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
V K M+ + A+ I DA +M + F H+PVVD D V+ +V
Sbjct: 70 PVSKYMSSDVVTASAQDSIRDAADVMVERGFHHIPVVDEDEGVIGMV 116
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + ++++ D + L GILT D R++A + ++TPVSK M+ + +
Sbjct: 30 MLDNGIGSVVVIDDDNRLEGILTTTDFV-RIVAEQKPKDQTPVSKYMSSDVVTASAQDSI 88
Query: 61 VEALQKMVQGKFRHLPVVENGE-VIALL---DIAKCL 93
+A MV+ F H+PVV+ E VI ++ D+A L
Sbjct: 89 RDAADVMVERGFHHIPVVDEDEGVIGMVTTSDLAGYL 125
>gi|91789393|ref|YP_550345.1| signal-transduction protein [Polaromonas sp. JS666]
gi|91698618|gb|ABE45447.1| putative signal-transduction protein with CBS domains [Polaromonas
sp. JS666]
Length = 146
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+ D + GI++++D +++ + ETPV +M+ +V
Sbjct: 32 MAEKNLGALLVLDGEEFV-GIISERDCTRKMLLADRLPRETPVRDIMSSPVQYVGPRHTN 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116
E + M + RHLPV++NG++I L+ I + D I+ ++ + A V+G
Sbjct: 91 EECMALMTDKRLRHLPVIDNGKLIGLVSIGDLVKDIISEQGFIIQQLEHYIAGVKG 146
>gi|409418943|ref|ZP_11258905.1| hypothetical protein PsHYS_07040 [Pseudomonas sp. HYS]
Length = 146
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + V AL + + + GI++++D A +++ + + TPVS +M+ P +
Sbjct: 34 MAEKNVGALPVV-QDGRVVGIVSERDYARKMVLKGRSSVGTPVSAIMSA-PVITVDPHQN 91
Query: 61 VE-ALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
VE + M RHLPVVENGE++ LL I + +AIA
Sbjct: 92 VEYCMNMMTNSHLRHLPVVENGELLGLLSIGDLVKEAIA 130
>gi|257091949|ref|YP_003165590.1| CBS domain containing membrane protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257044473|gb|ACV33661.1| CBS domain containing membrane protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 143
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 1/137 (0%)
Query: 143 SLSTIIPEKSK-VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVIS 201
+L I+ +KS +V +SP D V A + M + + + +V + GI + +D +VI
Sbjct: 3 TLRQILADKSGPLVIVSPDDAVFHALQVMADHNVGAVLVLDGKQLVGIFSERDYARKVIL 62
Query: 202 QNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHI 261
+ T V ++MT T D + + + IM + F HLPV+D DG VV +V + +
Sbjct: 63 FGKASKDTRVREIMTDKVLYVTPDRTVDECMAIMTEKHFRHLPVLDDDGRVVGIVSIGDV 122
Query: 262 THAAVATEILLDQIMRQ 278
+ + + Q M +
Sbjct: 123 VKETICEQQFIIQQMEK 139
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA V A+L+ D L+ GI +++D A +VI ++T V ++MT +V D
Sbjct: 31 MADHNVGAVLVLDGKQLV-GIFSERDYARKVILFGKASKDTRVREIMTDKVLYVTPDRTV 89
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARME 101
E + M + FRHLPV+ ++G V+ ++ I + + I +
Sbjct: 90 DECMAIMTEKHFRHLPVLDDDGRVVGIVSIGDVVKETICEQQ 131
>gi|297539691|ref|YP_003675460.1| putative signal transduction protein [Methylotenera versatilis 301]
gi|297259038|gb|ADI30883.1| putative signal transduction protein with CBS domains
[Methylotenera versatilis 301]
Length = 143
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A ++ AL++ D + L G+ +++D A +I + + + TP+S+VM+ N V +
Sbjct: 32 LAEYKIGALVVLDGDKL-VGVFSERDYAREIILKGKSSKTTPISEVMSSNVLTVKPNDTV 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
+A+ M RHLPV+E +VI +L I + + I +
Sbjct: 91 EQAMNIMSDKHIRHLPVLEGNKVIGMLSIGDLVKETIEYQQ 131
>gi|409203437|ref|ZP_11231640.1| inosine-5'-monophosphate dehydrogenase [Pseudoalteromonas
flavipulchra JG1]
Length = 612
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKV 214
VTI+PT ++ A K M + R+SS +VT + + G++T +D+ RV++Q+ + L E +
Sbjct: 160 VTIAPTASIRDAAKLMSQHRVSSIMVTEQARLVGVVTDRDLRNRVLAQDKDPSAPLAE-I 218
Query: 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
MT P+ + + ALH+M HLPV++
Sbjct: 219 MTEKPKHIFENNRVFSALHLMLKHNIHHLPVLN 251
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ RV ++++T+ A L G++TD+D+ RV+A++ + P++++MT P + +
Sbjct: 175 MSQHRVSSIMVTEQ-ARLVGVVTDRDLRNRVLAQDKD-PSAPLAEIMTEKPKHIFENNRV 232
Query: 61 VEALQKMVQGKFRHLPVV 78
AL M++ HLPV+
Sbjct: 233 FSALHLMLKHNIHHLPVL 250
>gi|357632371|ref|ZP_09130249.1| multi-sensor hybrid histidine kinase [Desulfovibrio sp. FW1012B]
gi|357580925|gb|EHJ46258.1| multi-sensor hybrid histidine kinase [Desulfovibrio sp. FW1012B]
Length = 830
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 111/253 (43%), Gaps = 39/253 (15%)
Query: 4 RRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEA 63
RR + L+ L GI+T+++I R + + PV+ +M+ V DT+ VEA
Sbjct: 32 RRSISCLIVAEAGLPVGIITERNILWAAAHRGEDFADRPVADLMSAPVVTVAEDTMLVEA 91
Query: 64 LQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGT 123
+ + + RHL +V+ AA + + + + +E+
Sbjct: 92 YHLLAKKRLRHLVMVD-----------------------AAGQARGVLTQSDLIER---- 124
Query: 124 SISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVE 183
G ++ E R +S I+ +VVT TV A ++M + +S +V +
Sbjct: 125 --LGHDSLSEIKR-------VSVIM--TREVVTAPGNITVREAVRRMADRSISCLIVARD 173
Query: 184 NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHL 243
+P GI+T +D++ R+++++ + +M+ C D P+ +A +M + L
Sbjct: 174 ARPAGIITERDVV-RLLAESPHLGRLKLYDIMSCPVVCVEADRPVFEAAMVMKKRRMRRL 232
Query: 244 PVVDRDGDVVDVV 256
VVD D V+ VV
Sbjct: 233 VVVDDDRRVLGVV 245
>gi|118431018|ref|NP_147193.2| hypothetical protein APE_0383.1 [Aeropyrum pernix K1]
gi|116062345|dbj|BAA79338.2| conserved hypothetical protein [Aeropyrum pernix K1]
Length = 158
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RV +L++ + L GILT DI V+A+ L+ E V +MTRNP +V +D
Sbjct: 36 MLENRVGSLIVVNERNTLLGILTKTDIIREVVAKGLDPESVRVGDIMTRNPYYVYTDDSV 95
Query: 61 VEALQKMVQGKFRHLPVVE 79
A M + HLPV++
Sbjct: 96 ERAASLMGEHNIGHLPVLD 114
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVE-NKPRGILTSKDILMRVISQNLPADSTL 210
S +T P +V A K MLE R+ S +V E N GILT DI+ V+++ L +S
Sbjct: 18 SPPITTLPMTSVKEAAKIMLENRVGSLIVVNERNTLLGILTKTDIIREVVAKGLDPESVR 77
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
V +MT NP D + A +M + HLPV+D
Sbjct: 78 VGDIMTRNPYYVYTDDSVERAASLMGEHNIGHLPVLD 114
>gi|294650507|ref|ZP_06727866.1| cystathionine beta-synthase [Acinetobacter haemolyticus ATCC 19194]
gi|292823650|gb|EFF82494.1| cystathionine beta-synthase [Acinetobacter haemolyticus ATCC 19194]
Length = 143
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 67/128 (52%), Gaps = 2/128 (1%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL 210
+ + TISP TVL A K M + + + VV + K GI + +D ++ ++STL
Sbjct: 13 EQSIFTISPNSTVLEAIKIMADKGVGALVVAEDEKVIGIFSERDYTRKIALMERSSNSTL 72
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE- 269
V +MT +++ + + L +M D HLPV++ D +V + + + AA+ +
Sbjct: 73 VADIMTSKVITVSLNNTVEECLQLMTDRHLRHLPVLEND-KLVGFISIGDLVKAAMEDQR 131
Query: 270 ILLDQIMR 277
IL++Q+ +
Sbjct: 132 ILIEQLQQ 139
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + V AL++ + ++ GI +++D ++ E + T V+ +MT V +
Sbjct: 32 MADKGVGALVVAEDEKVI-GIFSERDYTRKIALMERSSNSTLVADIMTSKVITVSLNNTV 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIA 90
E LQ M RHLPV+EN +++ + I
Sbjct: 91 EECLQLMTDRHLRHLPVLENDKLVGFISIG 120
>gi|161523709|ref|YP_001578721.1| KpsF/GutQ family protein [Burkholderia multivorans ATCC 17616]
gi|189351527|ref|YP_001947155.1| arabinose-5-phosphate isomerase [Burkholderia multivorans ATCC
17616]
gi|221211209|ref|ZP_03584188.1| sugar isomerase, KpsF/GutQ family [Burkholderia multivorans CGD1]
gi|421478263|ref|ZP_15926030.1| sugar isomerase, KpsF/GutQ family [Burkholderia multivorans CF2]
gi|160341138|gb|ABX14224.1| KpsF/GutQ family protein [Burkholderia multivorans ATCC 17616]
gi|189335549|dbj|BAG44619.1| arabinose-5-phosphate isomerase [Burkholderia multivorans ATCC
17616]
gi|221168570|gb|EEE01038.1| sugar isomerase, KpsF/GutQ family [Burkholderia multivorans CGD1]
gi|400225121|gb|EJO55306.1| sugar isomerase, KpsF/GutQ family [Burkholderia multivorans CF2]
Length = 327
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 3 ARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVE 62
A+R+ + D+N + GI TD D+ RV+AR+ + P++ VMTR P + +D LAVE
Sbjct: 232 AKRMGMTAVVDTNRKVAGIFTDGDL-RRVLARDGDFRRLPIADVMTREPRTIGADHLAVE 290
Query: 63 ALQKMVQGKFRHLPVVE-NGEVIALLDI 89
A++ M + + + VV+ +G +I L++
Sbjct: 291 AVELMERHRINQMLVVDADGVLIGALNM 318
>gi|241767956|ref|ZP_04765497.1| putative signal transduction protein with CBS domains [Acidovorax
delafieldii 2AN]
gi|241360854|gb|EER57698.1| putative signal transduction protein with CBS domains [Acidovorax
delafieldii 2AN]
Length = 146
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+ + +A++ GI+T++D A ++ T V VMT + +V +
Sbjct: 32 MADKGIGALLVMEGDAIV-GIVTERDYARKIALLGRKSSATLVRDVMTADVMYVQPAQTS 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
E + M + + RHLPVVE G+++ L+ I + D I+
Sbjct: 91 EECMALMTENRLRHLPVVEGGKLVGLISIGDLVKDIIS 128
>gi|402703556|ref|ZP_10851535.1| KpsF protein [Rickettsia helvetica C9P9]
Length = 319
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +R+ L+TD N L GI+TD D+ R I +++L+ S +MT+NP + SD A
Sbjct: 225 MNKKRLGCTLVTDKNQNLVGIITDGDLR-RHINDQIHLK--TASSIMTKNPIHISSDIFA 281
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCL 93
EAL M ++P+V++ +I ++ I L
Sbjct: 282 KEALNLMKTKNITNIPIVDDNVIIGIIHIHDLL 314
>gi|407641205|ref|YP_006804964.1| hypothetical protein O3I_000135 [Nocardia brasiliensis ATCC 700358]
gi|407304089|gb|AFT97989.1| hypothetical protein O3I_000135 [Nocardia brasiliensis ATCC 700358]
Length = 139
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA V +L++ D N +CGI+TD+DI + IA+ + T +++ P +V +D
Sbjct: 28 MAELGVGSLVIADDNDRMCGIITDRDIVVKCIAQGRSPGTTRAAELCESTPRWVAADADI 87
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL---DIAKCLYD 95
E L +M + + +PV+E+ ++ ++ D+A+ L D
Sbjct: 88 EEVLDEMESHRIKRMPVIEDKRLVGMISEADLARHLDD 125
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 157 ISPTDTVLMATKKMLELRLSSAVVTVEN-KPRGILTSKDILMRVISQNLPADSTLVEKVM 215
I+ +TV A + M EL + S V+ +N + GI+T +DI+++ I+Q +T ++
Sbjct: 15 IAKDETVGKAARVMAELGVGSLVIADDNDRMCGIITDRDIVVKCIAQGRSPGTTRAAELC 74
Query: 216 TPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
P D I + L M + +PV++
Sbjct: 75 ESTPRWVAADADIEEVLDEMESHRIKRMPVIE 106
>gi|326440855|ref|ZP_08215589.1| hypothetical protein SclaA2_07293 [Streptomyces clavuligerus ATCC
27064]
Length = 139
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 6 VDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQ 65
V AL + DSN LCGILTD+DI +A + + + P ++ + + + LQ
Sbjct: 33 VGALPIADSNERLCGILTDRDIVVGCVAVGHDPSKVTAGDLARGTPRWIDAGSGVEDVLQ 92
Query: 66 KMVQGKFRHLPVVENGEVIALL---DIAKCLYD 95
+M + R LPV+EN ++ ++ D+A+ L D
Sbjct: 93 EMEGHQIRRLPVIENKRLVGMISEADLARHLSD 125
>gi|325968392|ref|YP_004244584.1| signal-transduction protein with CBS domains [Vulcanisaeta
moutnovskia 768-28]
gi|323707595|gb|ADY01082.1| putative signal-transduction protein with CBS domains [Vulcanisaeta
moutnovskia 768-28]
Length = 147
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M V ++L+ D + GI T++D+ RV+A ++L+ TP+ KVM++ +
Sbjct: 46 MYMHNVGSILIIDEDGKPTGIFTERDLV-RVVAEGISLD-TPLMKVMSKKLITANTSESV 103
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDI 89
+ A KM++ RHLPVVE G+ + ++ I
Sbjct: 104 ISAAMKMIENNIRHLPVVEEGKTVGMVSI 132
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 141 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVEN-KPRGILTSKDILMRV 199
RPS+ + V++ TD + A KM + S ++ E+ KP GI T +D L+RV
Sbjct: 17 RPSMRIKELIRDGVISCKSTDPITCAVAKMYMHNVGSILIIDEDGKPTGIFTERD-LVRV 75
Query: 200 ISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVI 259
+++ + D+ L+ KVM+ A ++ A M + HLPVV+ +G V +V +
Sbjct: 76 VAEGISLDTPLM-KVMSKKLITANTSESVISAAMKMIENNIRHLPVVE-EGKTVGMVSIR 133
Query: 260 HITHAAVATEI 270
+ A +A E+
Sbjct: 134 DLVRALMAQEL 144
>gi|221200002|ref|ZP_03573045.1| sugar isomerase, KpsF/GutQ family [Burkholderia multivorans CGD2M]
gi|221206843|ref|ZP_03579855.1| sugar isomerase, KpsF/GutQ family [Burkholderia multivorans CGD2]
gi|421472603|ref|ZP_15920786.1| sugar isomerase, KpsF/GutQ family [Burkholderia multivorans ATCC
BAA-247]
gi|221173498|gb|EEE05933.1| sugar isomerase, KpsF/GutQ family [Burkholderia multivorans CGD2]
gi|221180241|gb|EEE12645.1| sugar isomerase, KpsF/GutQ family [Burkholderia multivorans CGD2M]
gi|400222720|gb|EJO53078.1| sugar isomerase, KpsF/GutQ family [Burkholderia multivorans ATCC
BAA-247]
Length = 327
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 3 ARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVE 62
A+R+ + D+N + GI TD D+ RV+AR+ + P++ VMTR P + +D LAVE
Sbjct: 232 AKRMGMTAVVDTNRKVAGIFTDGDL-RRVLARDGDFRRLPIADVMTREPRTIGADHLAVE 290
Query: 63 ALQKMVQGKFRHLPVVE-NGEVIALLDI 89
A++ M + + + VV+ +G +I L++
Sbjct: 291 AVELMERHRINQMLVVDADGVLIGALNM 318
>gi|107025989|ref|YP_623500.1| signal-transduction protein [Burkholderia cenocepacia AU 1054]
gi|116692826|ref|YP_838359.1| signal-transduction protein [Burkholderia cenocepacia HI2424]
gi|254250303|ref|ZP_04943623.1| hypothetical protein BCPG_05192 [Burkholderia cenocepacia PC184]
gi|105895363|gb|ABF78527.1| putative signal-transduction protein with CBS domains [Burkholderia
cenocepacia AU 1054]
gi|116650826|gb|ABK11466.1| putative signal-transduction protein with CBS domains [Burkholderia
cenocepacia HI2424]
gi|124876804|gb|EAY66794.1| hypothetical protein BCPG_05192 [Burkholderia cenocepacia PC184]
Length = 153
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+ D + + GI+T++D A +++ ++ + + T V ++MT +V
Sbjct: 35 MAEKGIGALLVVDGDDI-AGIVTERDYARKIVLQDRSSKATRVEEIMTAKVRYVEPSQST 93
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
E + M + + RHLPV++ G+++ L+ I + IA
Sbjct: 94 DECMALMTEHRMRHLPVLDGGKLVGLISIGDLVKSVIA 131
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+ T++ +D V A K M E + + +V + GI+T +D +++ Q+ + +T VE+
Sbjct: 19 IYTVTKSDLVYDAIKLMAEKGIGALLVVDGDDIAGIVTERDYARKIVLQDRSSKATRVEE 78
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
+MT + + +M + + HLPV+D G +V ++ + + + +A +
Sbjct: 79 IMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLVGLISIGDLVKSVIADQ 133
>gi|99080949|ref|YP_613103.1| signal-transduction protein [Ruegeria sp. TM1040]
gi|99037229|gb|ABF63841.1| putative signal-transduction protein with CBS domains [Ruegeria sp.
TM1040]
Length = 144
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 20 GILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE 79
GIL+++DI ++ V MTR+ D++A +AL M +G+FRH+PVVE
Sbjct: 50 GILSERDIVRQLAKVGSVCLNHKVEDYMTRDVVTCTQDSVAEQALSTMTEGRFRHMPVVE 109
Query: 80 NGE---VIALLDIAKCLYDAIARMERAAEKG 107
+G +I+L D+ K + +A ME+ A +G
Sbjct: 110 DGALVGIISLGDVVKAQLNEVA-MEKTALEG 139
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVE-NKPRGILTSKDILMRVISQNLPADSTL 210
++VVTI+P T+ A + + E + + VV+ + +KP GIL+ +DI+ ++ +
Sbjct: 13 AEVVTITPEATIEAAAQLLSEHGIGTVVVSPDKSKPVGILSERDIVRQLAKVGSVCLNHK 72
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
VE MT + T D+ AL M +G+F H+PVV+ DG +V ++
Sbjct: 73 VEDYMTRDVVTCTQDSVAEQALSTMTEGRFRHMPVVE-DGALVGII 117
>gi|407473531|ref|YP_006787931.1| cystathionine beta-synthase domain-containing protein [Clostridium
acidurici 9a]
gi|407050039|gb|AFS78084.1| cystathionine beta-synthase domain-containing protein [Clostridium
acidurici 9a]
Length = 144
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Query: 20 GILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE 79
G+LTD+DI R I+ +L + V +M+ NP V DT EA + M Q + R LPVVE
Sbjct: 47 GLLTDRDIIVRAISEGKSLSSS-VKDIMSANPITVSPDTEVSEAAKLMSQNQIRRLPVVE 105
Query: 80 NGE---VIALLDIA---KCLYDAIARMERAAE 105
G+ +++L D+A KC + A + + +E
Sbjct: 106 KGKLVGIVSLGDLAVDNKCSHKAGSALSSISE 137
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 188 GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
G+LT +DI++R IS+ S+ V+ +M+ NP + DT + +A +M + LPVV+
Sbjct: 47 GLLTDRDIIVRAISEGKSLSSS-VKDIMSANPITVSPDTEVSEAAKLMSQNQIRRLPVVE 105
Query: 248 RDGDVVDVV 256
+ G +V +V
Sbjct: 106 K-GKLVGIV 113
>gi|402568485|ref|YP_006617829.1| signal-transduction protein [Burkholderia cepacia GG4]
gi|402249682|gb|AFQ50135.1| putative signal-transduction protein [Burkholderia cepacia GG4]
Length = 153
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+ D + GI+T++D A +V+ ++ + + T V ++MT +V
Sbjct: 35 MAEKGIGALLVMDGEDI-AGIVTERDYARKVVLQDRSSKATRVEEIMTAKVRYVEPSQST 93
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
E + M + + RHLPV+ +G++I L+ I + IA
Sbjct: 94 DECMALMTEHRMRHLPVLHDGKLIGLISIGDLVKSVIA 131
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+ T++ D V A K M E + + +V GI+T +D +V+ Q+ + +T VE+
Sbjct: 19 IYTVAKADFVYDAIKLMAEKGIGALLVMDGEDIAGIVTERDYARKVVLQDRSSKATRVEE 78
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
+MT + + +M + + HLPV+ DG ++ ++ + + + +A +
Sbjct: 79 IMTAKVRYVEPSQSTDECMALMTEHRMRHLPVL-HDGKLIGLISIGDLVKSVIADQ 133
>gi|399002176|ref|ZP_10704867.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM18]
gi|398125432|gb|EJM14911.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM18]
Length = 146
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 5/100 (5%)
Query: 1 MAARRVDAL-LLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTL 59
MAA+ V AL +L D + GI++++D A +++ + + TPVS +M +P +
Sbjct: 34 MAAKNVGALPVLKDGK--VVGIISERDYARKLVLKGRSSVGTPVSDIMV-SPVITVDTHQ 90
Query: 60 AVEALQKMVQGK-FRHLPVVENGEVIALLDIAKCLYDAIA 98
VE ++ K RHLPVVE+GE++ LL I + +AIA
Sbjct: 91 TVETCMGIMSDKRLRHLPVVEDGELMGLLSIGDLVKEAIA 130
>gi|384919536|ref|ZP_10019582.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding
domain-containing protein [Citreicella sp. 357]
gi|384466561|gb|EIE51060.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding
domain-containing protein [Citreicella sp. 357]
Length = 607
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 3/126 (2%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKV 214
+T++P TV A + M E +SS +T + GI+T +D+ +V+ LP D T V +V
Sbjct: 153 LTLTPEATVQQAARMMAERNVSSVCITKDEDLLGIVTIRDVSGKVVGAGLPFD-TPVARV 211
Query: 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITH-AAVATEILLD 273
MT P D LH+M + + H+PV + G +V +V +T AV++ L+
Sbjct: 212 MTQAPVTLPPSAIGSDVLHMMMERRIGHVPVTE-GGRLVGIVTQTDLTRFQAVSSAELVS 270
Query: 274 QIMRQQ 279
+I R Q
Sbjct: 271 EIARAQ 276
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 63/112 (56%), Gaps = 7/112 (6%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA R V ++ +T LL GI+T +D++ +V+ L + TPV++VMT+ P + +
Sbjct: 168 MAERNVSSVCITKDEDLL-GIVTIRDVSGKVVGAGLPFD-TPVARVMTQAPVTLPPSAIG 225
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL---DIAKCLYDAIARMERAAEKGKA 109
+ L M++ + H+PV E G ++ ++ D+ + + A++ E +E +A
Sbjct: 226 SDVLHMMMERRIGHVPVTEGGRLVGIVTQTDLTR--FQAVSSAELVSEIARA 275
>gi|297622495|ref|YP_003703929.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Truepera radiovictrix DSM 17093]
gi|297163675|gb|ADI13386.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Truepera radiovictrix DSM 17093]
Length = 619
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKV 214
VT++P +V A + M E +SS VV E + GILT +D+ RV++Q P ST V +V
Sbjct: 163 VTVTPEVSVQRAAEVMYEHLISSVVVLEEGRVVGILTDRDLRGRVVAQGRPY-STPVREV 221
Query: 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPV 245
MTP P +AL M HLPV
Sbjct: 222 MTPAPRTVDQGAYAFEALLTMTRFNIHHLPV 252
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 20 GILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE 79
GILTD+D+ RV+A+ TPV +VMT P V A EAL M + HLPV
Sbjct: 196 GILTDRDLRGRVVAQGRPYS-TPVREVMTPAPRTVDQGAYAFEALLTMTRFNIHHLPVTG 254
Query: 80 NGEVIALL 87
G ++ L+
Sbjct: 255 GGRLLGLV 262
>gi|217972889|ref|YP_002357640.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella baltica OS223]
gi|217498024|gb|ACK46217.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella baltica OS223]
Length = 615
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RV +LL+TD N L GILTDKD+ RV+A L+ V + MT +P + S+ L
Sbjct: 176 MRNSRVSSLLVTD-NHKLVGILTDKDLRNRVLAAGLD-GHIAVHQAMTVSPISISSNALI 233
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
EA+ M + HLP+++ + I ++
Sbjct: 234 FEAMLLMSEHNIHHLPIIDQDKAIGMV 260
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
S + I +V A M R+SS +VT +K GILT KD+ RV++ L V
Sbjct: 158 SAPIVIDAHASVTQAALLMRNSRVSSLLVTDNHKLVGILTDKDLRNRVLAAGLDG-HIAV 216
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEIL 271
+ MT +P + + I +A+ +M + HLP++D+D + V + +L
Sbjct: 217 HQAMTVSPISISSNALIFEAMLLMSEHNIHHLPIIDQDKAIGMVTSTDILRGQGSQPLLL 276
Query: 272 LDQIMRQQ 279
+ +I RQQ
Sbjct: 277 IGEIERQQ 284
>gi|146303024|ref|YP_001190340.1| signal transduction protein [Metallosphaera sedula DSM 5348]
gi|145701274|gb|ABP94416.1| putative signal transduction protein with CBS domains
[Metallosphaera sedula DSM 5348]
Length = 128
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL 210
K++V+++ T+ TK M E + S ++T KP GI+T +D++ R I ++ D
Sbjct: 10 KTEVISVEKGATLRQITKIMTEKNVGSVIITENGKPIGIVTERDVV-RAIGKDHKLDDK- 67
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
V+ +MT + D+PI AL +M HLPV+ DG + ++ + + A
Sbjct: 68 VDDIMTVSLITVREDSPITGALSLMRTYNIRHLPVISEDGKLTGIISIRDVAKA 121
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + V ++++T+ N GI+T++D+ R I ++ L++ V +MT + V D+
Sbjct: 29 MTEKNVGSVIITE-NGKPIGIVTERDVV-RAIGKDHKLDD-KVDDIMTVSLITVREDSPI 85
Query: 61 VEALQKMVQGKFRHLPVV-ENGE---VIALLDIAKCLYD 95
AL M RHLPV+ E+G+ +I++ D+AK L D
Sbjct: 86 TGALSLMRTYNIRHLPVISEDGKLTGIISIRDVAKALDD 124
>gi|170737907|ref|YP_001779167.1| signal-transduction protein [Burkholderia cenocepacia MC0-3]
gi|169820095|gb|ACA94677.1| putative signal-transduction protein with CBS domains [Burkholderia
cenocepacia MC0-3]
Length = 153
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+ D + + GI+T++D A +++ ++ + + T V ++MT +V
Sbjct: 35 MAEKGIGALLVVDGDDI-AGIVTERDYARKIVLQDRSSKATRVEEIMTAKVRYVEPSQST 93
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
E + M + + RHLPV++ G+++ L+ I + IA
Sbjct: 94 DECMALMTEHRMRHLPVLDGGKLVGLISIGDLVKSVIA 131
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+ T++ TD V A K M E + + +V + GI+T +D +++ Q+ + +T VE+
Sbjct: 19 IYTVTKTDLVYDAIKLMAEKGIGALLVVDGDDIAGIVTERDYARKIVLQDRSSKATRVEE 78
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
+MT + + +M + + HLPV+D G +V ++ + + + +A +
Sbjct: 79 IMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLVGLISIGDLVKSVIADQ 133
>gi|167647687|ref|YP_001685350.1| signal-transduction protein [Caulobacter sp. K31]
gi|167350117|gb|ABZ72852.1| putative signal-transduction protein with CBS domains [Caulobacter
sp. K31]
Length = 143
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Query: 4 RRVDALLLTDSNALLCGILTDKDIATRVIARE-LNLEETPVSKVMTRNPTFVLSDTLAVE 62
RRV A+++ + + + GIL+++DI RVIA+E P+S MTR+ F +
Sbjct: 33 RRVGAMVVLEEDETIAGILSERDI-VRVIAKEGAGALSKPISSCMTRDVVFAQPEETVDA 91
Query: 63 ALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113
L++M + RHLPV + + ++ I + I+ + AE KA AA
Sbjct: 92 LLERMTDRRIRHLPVCKGKRLAGIISIGDLVKYKISEAQAEAEGLKAYIAA 142
>gi|153001189|ref|YP_001366870.1| signal-transduction protein [Shewanella baltica OS185]
gi|373950008|ref|ZP_09609969.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella baltica OS183]
gi|386324159|ref|YP_006020276.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella baltica BA175]
gi|151365807|gb|ABS08807.1| putative signal-transduction protein with CBS domains [Shewanella
baltica OS185]
gi|333818304|gb|AEG10970.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella baltica BA175]
gi|373886608|gb|EHQ15500.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella baltica OS183]
Length = 615
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RV +LL+TD N L GILTDKD+ RV+A L+ V + MT +P + S+ L
Sbjct: 176 MRNSRVSSLLVTD-NHKLVGILTDKDLRNRVLAAGLD-GHIAVHQAMTVSPISISSNALI 233
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
EA+ M + HLP+++ + I ++
Sbjct: 234 FEAMLLMSEHNIHHLPIIDQDKAIGMV 260
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
S + I +V A M R+SS +VT +K GILT KD+ RV++ L V
Sbjct: 158 SAPIVIDAHASVTQAALLMRNSRVSSLLVTDNHKLVGILTDKDLRNRVLAAGLDG-HIAV 216
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEIL 271
+ MT +P + + I +A+ +M + HLP++D+D + V + +L
Sbjct: 217 HQAMTVSPISISSNALIFEAMLLMSEHNIHHLPIIDQDKAIGMVTSTDILRGQGSQPLLL 276
Query: 272 LDQIMRQQ 279
+ +I RQQ
Sbjct: 277 IGEIERQQ 284
>gi|429216754|ref|YP_007174744.1| transcriptional regulator [Caldisphaera lagunensis DSM 15908]
gi|429133283|gb|AFZ70295.1| putative transcriptional regulator containing CBS domains
[Caldisphaera lagunensis DSM 15908]
Length = 147
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + A+ + D + + GI T++D+ +V+ + LEE + VMT+NP A
Sbjct: 35 MNETGIGAVAVIDEHGKIIGIFTERDLLNKVLVKNKKLEEVIIEDVMTKNPIIGNPSWSA 94
Query: 61 VEALQKMVQGKFRHLPVVEN 80
+A++ M FRHLP+V++
Sbjct: 95 SKAIKTMAYYGFRHLPIVDD 114
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSS-AVVTVENKPRGILTSKDILMRVI 200
P + TI P + P D V A + M E + + AV+ K GI T +D+L +V+
Sbjct: 9 PPIITICPGLQP--KVYPKDNVSKAIQVMNETGIGAVAVIDEHGKIIGIFTERDLLNKVL 66
Query: 201 SQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG 250
+N + ++E VMT NP A+ M F HLP+VD G
Sbjct: 67 VKNKKLEEVIIEDVMTKNPIIGNPSWSASKAIKTMAYYGFRHLPIVDDAG 116
>gi|409402255|ref|ZP_11251845.1| CBS domain-containing protein [Acidocella sp. MX-AZ02]
gi|409129115|gb|EKM98982.1| CBS domain-containing protein [Acidocella sp. MX-AZ02]
Length = 143
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%)
Query: 3 ARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVE 62
A +V +L N L GIL+++D+ + R +MTR T +T +
Sbjct: 31 AEKVIGAVLVVENGELIGILSERDVVRTLATRAAGTLSMTAGALMTRKITTGTPETTVEQ 90
Query: 63 ALQKMVQGKFRHLPVVENGEVIALLDIA 90
A++ M G FRHLP++ENG + L+ I
Sbjct: 91 AMEMMTNGHFRHLPILENGRLTGLVSIG 118
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Query: 144 LSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPR-GILTSKDILMRVISQ 202
+S I+ K P D + +L ++ AV+ VEN GIL+ +D++ + ++
Sbjct: 3 VSAILKNKPPGFVSVPADLPVSGVVSILAEKVIGAVLVVENGELIGILSERDVVRTLATR 62
Query: 203 NLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD--RDGDVVDVVDVI 259
S +MT T +T + A+ +M +G F HLP+++ R +V + DV+
Sbjct: 63 AAGTLSMTAGALMTRKITTGTPETTVEQAMEMMTNGHFRHLPILENGRLTGLVSIGDVV 121
>gi|399065218|ref|ZP_10747815.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Novosphingobium sp. AP12]
gi|398029892|gb|EJL23337.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Novosphingobium sp. AP12]
Length = 141
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 60/106 (56%), Gaps = 5/106 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLE--ETPVSKVMTRNPTFVLSDT 58
++ RR+ A+ + + + + GI +++D+ R+ RE+ E + P+ +MT +P V DT
Sbjct: 29 LSDRRIGAVPVME-DGEIAGIFSERDVIYRL--REMGAEVLDMPLGHIMTASPVTVDPDT 85
Query: 59 LAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAA 104
+ AL M + + RHLPVV +G ++A + I + I ++E A
Sbjct: 86 AVIAALSLMTRRRIRHLPVVADGRMVAFVSIGDLVKYRIDKIESEA 131
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 143 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQ 202
++ II + VVT + TV A + + R+ + V + + GI + +D++ R+
Sbjct: 2 TIGRIIEGRGDVVTCDVSTTVRDAVGILSDRRIGAVPVMEDGEIAGIFSERDVIYRLREM 61
Query: 203 NLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+ +MT +P DT ++ AL +M + HLPVV DG +V V +
Sbjct: 62 GAEVLDMPLGHIMTASPVTVDPDTAVIAALSLMTRRRIRHLPVV-ADGRMVAFVSI 116
>gi|218295637|ref|ZP_03496433.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Thermus aquaticus Y51MC23]
gi|218243796|gb|EED10323.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Thermus aquaticus Y51MC23]
Length = 580
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 4/102 (3%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKV 214
+ I+P TV A ++M + +SS + VE +P GILT +D+ RV++Q P+ ST V +V
Sbjct: 147 IYIAPGATVAEAARRMAQEGVSS--LLVEGEPLGILTDRDLRNRVLAQERPS-STPVGEV 203
Query: 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
T DTP+ +AL M + HLP+++ VV VV
Sbjct: 204 ATRPLFALPADTPLYEALAAMVERGIHHLPLLE-GAKVVGVV 244
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVL-SDTL 59
MA V +LL+ GILTD+D+ RV+A+E TPV +V TR P F L +DT
Sbjct: 162 MAQEGVSSLLVEGEP---LGILTDRDLRNRVLAQE-RPSSTPVGEVATR-PLFALPADTP 216
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALL 87
EAL MV+ HLP++E +V+ ++
Sbjct: 217 LYEALAAMVERGIHHLPLLEGAKVVGVV 244
>gi|440783399|ref|ZP_20961117.1| hypothetical protein F502_13258 [Clostridium pasteurianum DSM 525]
gi|440219539|gb|ELP58751.1| hypothetical protein F502_13258 [Clostridium pasteurianum DSM 525]
Length = 142
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 20 GILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE 79
GI+TD+DI R +A N + V +VM+ NP + D A EA + M + + R LPVVE
Sbjct: 45 GIITDRDITLRSVANGENAKVQTVKEVMSSNPVIIQPDMEANEAARIMCERQVRRLPVVE 104
Query: 80 NGE---VIALLDIA 90
N +IAL DIA
Sbjct: 105 NDNLVGIIALGDIA 118
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
V +++ DT+ A + M E + S V K GI+T +DI +R ++ A V++
Sbjct: 11 VASLNVEDTIERAAQLMREHNIGSIPVCRGEKVVGIITDRDITLRSVANGENAKVQTVKE 70
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG 250
VM+ NP D +A IM + + LPVV+ D
Sbjct: 71 VMSSNPVIIQPDMEANEAARIMCERQVRRLPVVENDN 107
>gi|168700590|ref|ZP_02732867.1| serine phosphatase [Gemmata obscuriglobus UQM 2246]
Length = 387
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%)
Query: 5 RVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEAL 64
R+ A+L+T L GI T++D+ RV + E PVS MT +P + + A+
Sbjct: 25 RIGAVLVTTGEHKLQGIFTERDLLRRVADADPGWRELPVSAWMTPDPITIGPNEAWEAAV 84
Query: 65 QKMVQGKFRHLPVVENGEVIALL 87
M Q + RHLPVVE+ V+ LL
Sbjct: 85 SLMEQKRVRHLPVVEDRTVLGLL 107
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTL 210
S V + P+ + +M LR+ + +VT E+K +GI T +D+L RV +
Sbjct: 3 STPVRVPPSCPLRDVMGEMNRLRIGAVLVTTGEHKLQGIFTERDLLRRVADADPGWRELP 62
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
V MTP+P + A+ +M + HLPVV+
Sbjct: 63 VSAWMTPDPITIGPNEAWEAAVSLMEQKRVRHLPVVE 99
>gi|351727132|ref|NP_001237662.1| uncharacterized protein LOC100306364 [Glycine max]
gi|255628307|gb|ACU14498.1| unknown [Glycine max]
Length = 206
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 12/129 (9%)
Query: 143 SLSTIIPEKSK-----VVTISPTDTVLMATKKMLELRLSSAVVTVENKPR---GILTSKD 194
++S I+ +K K + + DTV A K M + + + VV + + GI+T +D
Sbjct: 55 TISDILNDKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKSDANKAITGIITERD 114
Query: 195 ILMRVISQNLPADSTLVEKVMTPNPECATI--DTPIVDALHIMHDGKFLHLPVVDRDG-- 250
L ++I Q + ST V +MT + T+ DT ++ A+ +M D + H+PV+D G
Sbjct: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVTPDTKVLQAMQLMTDNRIRHIPVIDEKGMI 174
Query: 251 DVVDVVDVI 259
+V + DV+
Sbjct: 175 GMVSIGDVV 183
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 1 MAARRVDALLL--TDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTF--VLS 56
M V AL++ +D+N + GI+T++D ++I + + + T V +MT V
Sbjct: 87 MTQNNVGALVVVKSDANKAITGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVTP 146
Query: 57 DTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMER 102
DT ++A+Q M + RH+PV++ +I ++ I + A+ R R
Sbjct: 147 DTKVLQAMQLMTDNRIRHIPVIDEKGMIGMVSIGDVVR-AVVREHR 191
>gi|238024821|ref|YP_002909053.1| signal-transduction protein [Burkholderia glumae BGR1]
gi|237879486|gb|ACR31818.1| signal-transduction protein [Burkholderia glumae BGR1]
Length = 154
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + V AL++T+ N ++ GI+T++D A +V+ E + + T + ++MT +V +
Sbjct: 35 MAIKSVGALVVTEGNDIV-GIVTERDYARKVVLLERSSKATRIEEIMTMKVRYVEPSQTS 93
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
+ + M + + RHLPV++ G+++ ++ I + IA
Sbjct: 94 DQCMALMTEHRVRHLPVLDGGKLVGVISIGDLVKSVIA 131
Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Query: 149 PEKSK-VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPAD 207
PE + V TI ++V A K M + + VVT N GI+T +D +V+ +
Sbjct: 13 PEAGRTVYTIGKDESVYDALKLMAIKSVGALVVTEGNDIVGIVTERDYARKVVLLERSSK 72
Query: 208 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
+T +E++MT + +M + + HLPV+D G +V V+ + + + +A
Sbjct: 73 ATRIEEIMTMKVRYVEPSQTSDQCMALMTEHRVRHLPVLD-GGKLVGVISIGDLVKSVIA 131
Query: 268 TE 269
+
Sbjct: 132 DQ 133
>gi|28210105|ref|NP_781049.1| inosine-5'-monophosphate dehydrogenase [Clostridium tetani E88]
gi|28202541|gb|AAO34986.1| inosine-5-monophosphate dehydrogenase related protein [Clostridium
tetani E88]
Length = 143
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPV 77
+ GI+TD+DIA R +A +++ V +MT NP V + A EA + M + + R LPV
Sbjct: 43 IVGIITDRDIALRSVAMGESIQNQTVRNIMTSNPITVSPNISATEAAEIMSKKQIRRLPV 102
Query: 78 VENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVE 115
VEN ++ ++ + + +E +A GKA+ E
Sbjct: 103 VENKNLVGMVSLGDISTE--PNLENSA--GKALTGISE 136
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+V++ DTV A + M E + S + E K GI+T +DI +R ++ + V
Sbjct: 11 IVSLQAEDTVEHAAQLMKEHGVGSLPICNEGKIVGIITDRDIALRSVAMGESIQNQTVRN 70
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDR 248
+MT NP + + +A IM + LPVV+
Sbjct: 71 IMTSNPITVSPNISATEAAEIMSKKQIRRLPVVEN 105
>gi|397689681|ref|YP_006526935.1| signal-transduction protein with CBS domains [Melioribacter roseus
P3M]
gi|395811173|gb|AFN73922.1| putative signal-transduction protein with CBS domains
[Melioribacter roseus P3M]
Length = 142
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + + D L G+ +++D+ RVIA+ LN+ T + VMTR +
Sbjct: 29 MAEHNIGLVPVLDDEGKLVGVFSERDLVKRVIAKGLNINSTKIDDVMTRELVLADINESH 88
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
E L+KM RHL ++ENG++ +L
Sbjct: 89 QECLKKMKDKGTRHLLIIENGKLAGIL 115
>gi|389851608|ref|YP_006353842.1| inosine-5'-monophosphate dehydrogenase-like protein [Pyrococcus sp.
ST04]
gi|388248914|gb|AFK21767.1| putative inosine-5'-monophosphate dehydrogenase-like protein
[Pyrococcus sp. ST04]
Length = 136
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M V +L++ D + + G T D+ RVI L + TPV ++MT+N V S+T
Sbjct: 31 MMEFEVGSLVVVDDHGNVIGFFTKSDVLRRVIVPGLPYD-TPVREIMTKNLITVDSNTPL 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERA 103
E L+KM + + +H+ V E G+++ + ++ L + R+E A
Sbjct: 90 GEVLKKMAEHRIKHILVEEEGKIVGIFTLSDLLEASRRRLETA 132
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPR-GILTSKDILMRVISQNLPADSTLV 211
K++ + P TV A++ M+E + S VV ++ G T D+L RVI LP D T V
Sbjct: 14 KLLGVKPNTTVQEASRIMMEFEVGSLVVVDDHGNVIGFFTKSDVLRRVIVPGLPYD-TPV 72
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDV 255
++MT N +TP+ + L M + + H+ +V+ +G +V +
Sbjct: 73 REIMTKNLITVDSNTPLGEVLKKMAEHRIKHI-LVEEEGKIVGI 115
>gi|304315352|ref|YP_003850499.1| CBS domain-containing protein [Methanothermobacter marburgensis
str. Marburg]
gi|302588811|gb|ADL59186.1| CBS domain-containing protein [Methanothermobacter marburgensis
str. Marburg]
Length = 272
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 116/263 (44%), Gaps = 56/263 (21%)
Query: 1 MAARRVDALLLTDSNAL----LCGILTDKDIATRV-IARELNLEETP--VSKVMTRNPTF 53
M + V LL+ ++N+ L GI+T+KDIA ++ +R N+ + VS VMT
Sbjct: 27 MGKKNVSRLLVINTNSEHERELVGIVTEKDIAIKLGSSRYGNMAPSHFHVSTVMTGELIT 86
Query: 54 VLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113
D A A M++ LPV+ +GE++ ++ + L I R RA EK A
Sbjct: 87 ADPDMDAGNAASLMLENNIGSLPVILDGEILGIVTKSDIL--DICR-GRAYEKYTA---- 139
Query: 114 VEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLEL 173
G +S ++++T+SP + V+ A + M++
Sbjct: 140 --------GDVMS-------------------------TEMITVSPQERVVHARRMMIDA 166
Query: 174 RLSSAVVTVENKPRGILTSKDILMRVIS-------QNLPA--DSTLVEKVMTPNPECATI 224
+ +V + GILT+KD+ VI+ ++ P+ + LVE +M N
Sbjct: 167 GIGRLLVMDGGELAGILTAKDMTRAVINFRKVVPDKHKPSRIRNLLVEDIMKQNVRTVEA 226
Query: 225 DTPIVDALHIMHDGKFLHLPVVD 247
DTP+ D +M + + PVVD
Sbjct: 227 DTPVTDLASMMMETGYGGFPVVD 249
>gi|170291096|ref|YP_001737912.1| signal transduction protein [Candidatus Korarchaeum cryptofilum
OPF8]
gi|170175176|gb|ACB08229.1| putative signal transduction protein with CBS domains [Candidatus
Korarchaeum cryptofilum OPF8]
Length = 161
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 4/127 (3%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQ---NLPADSTL 210
++T+ P TV A K M E + S V+ E + RGI+T +D++ R I+ P D
Sbjct: 26 IITMRPDGTVYEAAKLMKENNIGSVVIMEEGELRGIVTERDLITRYIAAEDGRRPEDVK- 84
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEI 270
V ++MT +P +T I +A IM + L VV+ DG VV ++ I A
Sbjct: 85 VSEIMTKDPITIRDNTDIDEAARIMIEKNIRRLIVVNYDGRVVGIISSRDILKVAPHIWF 144
Query: 271 LLDQIMR 277
LL Q +R
Sbjct: 145 LLLQELR 151
>gi|85713182|ref|ZP_01044213.1| Signaling protein with a cAMP-binding, CBS domains and predicted
nucleotidyltransferase domain [Idiomarina baltica OS145]
gi|85693006|gb|EAQ30973.1| Signaling protein with a cAMP-binding, CBS domains and predicted
nucleotidyltransferase domain [Idiomarina baltica OS145]
Length = 612
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ + ++L+ DS+ L+ GILTD+DI RV+A+ L T V+ VMT P FV +
Sbjct: 174 MSENGISSILVVDSDQLV-GILTDRDIRNRVVAQGLGFNVT-VAAVMTHLPEFVFAHRSL 231
Query: 61 VEALQKMVQGKFRHLPVVE 79
++AL M HLPVV+
Sbjct: 232 LDALTTMTANNVHHLPVVD 250
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKV 214
++++ T+ A + M E +SS +V ++ GILT +DI RV++Q L + T V V
Sbjct: 159 ISLASDTTIQNAAQCMSENGISSILVVDSDQLVGILTDRDIRNRVVAQGLGFNVT-VAAV 217
Query: 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
MT PE ++DAL M HLPVVD
Sbjct: 218 MTHLPEFVFAHRSLLDALTTMTANNVHHLPVVD 250
>gi|420241373|ref|ZP_14745509.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Rhizobium sp. CF080]
gi|398071278|gb|EJL62541.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Rhizobium sp. CF080]
Length = 144
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%)
Query: 4 RRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEA 63
+++ A+++T + GI T++D+ + + + + PV MT DT E
Sbjct: 35 KKIGAVVVTGMEGRIAGIFTERDLVRAIAGKGAGVLDQPVKSAMTTAVQRCKDDTTVDEL 94
Query: 64 LQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113
+ M G+FRH+PV ++G++ ++ I + I +E AE KA A
Sbjct: 95 MGMMSSGRFRHVPVEQDGKLAGIISIGDVVKSRIREIELEAEHIKAYIAG 144
Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILMRVISQNLPADSTLVE 212
VVT+ P T+L + + ++ + VVT +E + GI T +D++ + + V+
Sbjct: 16 VVTVGPDKTLLEVAGILNDKKIGAVVVTGMEGRIAGIFTERDLVRAIAGKGAGVLDQPVK 75
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
MT + DT + + + +M G+F H+P V++DG + ++ +
Sbjct: 76 SAMTTAVQRCKDDTTVDELMGMMSSGRFRHVP-VEQDGKLAGIISI 120
>gi|86137571|ref|ZP_01056148.1| GGDEF domain protein [Roseobacter sp. MED193]
gi|85825906|gb|EAQ46104.1| GGDEF domain protein [Roseobacter sp. MED193]
Length = 313
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 5/123 (4%)
Query: 150 EKSKVVTISPTDTVLMATKKMLELRLSSAVVTVE-NKPRGILTSKDILMRVISQNLPADS 208
+ + V I P+ T+ A + +LE +L + VVT + NK GI++ +D+L V S++ A
Sbjct: 11 KSTGVKGIDPSATLRQAAQVLLENKLGALVVTDQSNKLIGIVSERDLLSVVASRDPKAAD 70
Query: 209 TLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268
LV +VMT + C D + LH+M++ H+PV+ ++ ++V ++ I A
Sbjct: 71 ALVCEVMTRSVICCGPDDEVAYLLHLMNENAIRHIPVLQQE----ELVGILSIRELTKAY 126
Query: 269 EIL 271
E+L
Sbjct: 127 ELL 129
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 48/85 (56%)
Query: 5 RVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEAL 64
++ AL++TD + L GI++++D+ + V +R+ + V +VMTR+ D L
Sbjct: 35 KLGALVVTDQSNKLIGIVSERDLLSVVASRDPKAADALVCEVMTRSVICCGPDDEVAYLL 94
Query: 65 QKMVQGKFRHLPVVENGEVIALLDI 89
M + RH+PV++ E++ +L I
Sbjct: 95 HLMNENAIRHIPVLQQEELVGILSI 119
>gi|374632868|ref|ZP_09705235.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Metallosphaera yellowstonensis MK1]
gi|373524352|gb|EHP69229.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Metallosphaera yellowstonensis MK1]
Length = 138
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 170 MLELRLSSAVVTVENKPRGILTSKDILMRVISQN---LPADSTLVEKVMTPNPECATIDT 226
M E + S +VT KP GI+T +DI+ + S +PAD K+MT + D+
Sbjct: 36 MTEKNVGSVIVTENGKPVGIITERDIVRAIGSGKSLEIPAD-----KIMTASLITIREDS 90
Query: 227 PIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
PI AL +M HLPVVD +G +V +V + I A
Sbjct: 91 PITGALSLMRSYNIRHLPVVDGEGKLVGIVSIRDIARA 128
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 9/100 (9%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + V ++++T+ N GI+T++DI R I +LE P K+MT + + D+
Sbjct: 36 MTEKNVGSVIVTE-NGKPVGIITERDIV-RAIGSGKSLE-IPADKIMTASLITIREDSPI 92
Query: 61 VEALQKMVQGKFRHLPVVENGE-----VIALLDIAKCLYD 95
AL M RHLPVV +GE ++++ DIA+ L D
Sbjct: 93 TGALSLMRSYNIRHLPVV-DGEGKLVGIVSIRDIARALDD 131
>gi|336451598|ref|ZP_08622035.1| Putative signal-transduction protein [Idiomarina sp. A28L]
gi|336281411|gb|EGN74691.1| Putative signal-transduction protein [Idiomarina sp. A28L]
Length = 613
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+A RV LL+ D L GILTD+D+ RV+A +N + V+ VMT P + +
Sbjct: 175 MSAERVSCLLVVDDQQLR-GILTDRDLRNRVVAVGVNFD-VSVAAVMTPMPAIIYARDSL 232
Query: 61 VEALQKMVQGKFRHLPVVENGEV 83
+AL M Q HLPV+++ E+
Sbjct: 233 FDALTMMGQANIHHLPVLDDNEI 255
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
K + IS T ++ A K M R+S +V + + RGILT +D+ RV++ + D + V
Sbjct: 158 KPIQISSTASIQSAAKLMSAERVSCLLVVDDQQLRGILTDRDLRNRVVAVGVNFDVS-VA 216
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
VMTP P + DAL +M HLPV+D
Sbjct: 217 AVMTPMPAIIYARDSLFDALTMMGQANIHHLPVLD 251
>gi|296123973|ref|YP_003631751.1| KpsF/GutQ family protein [Planctomyces limnophilus DSM 3776]
gi|296016313|gb|ADG69552.1| KpsF/GutQ family protein [Planctomyces limnophilus DSM 3776]
Length = 391
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 3 ARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVE 62
RR A++L D LL GI TD D+A + + + P+ VMT PT + L E
Sbjct: 252 GRRTGAVMLVDEEGLLTGIFTDSDLARLLEQKRDEQLDAPIRNVMTSRPTTISPTMLLEE 311
Query: 63 ALQKMVQGKFRHLPVV-ENGEVIALLDI 89
LQ + + PVV E+G + L+DI
Sbjct: 312 VLQLFAERRLSEFPVVDESGHPVGLVDI 339
>gi|219850552|ref|YP_002464985.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Chloroflexus aggregans DSM 9485]
gi|219544811|gb|ACL26549.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Chloroflexus aggregans DSM 9485]
Length = 613
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 63/122 (51%), Gaps = 14/122 (11%)
Query: 126 SGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENK 185
S P F LR+ + RP V+ISP TV A + M R+SS +V E+
Sbjct: 142 SNPALFQTRLRDLIARPP-----------VSISPDATVGEAARLMRAERISSLIV--EHD 188
Query: 186 PRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPV 245
P GI+T +D+ RV+++ L +D+T V +VM+ + D + L +M + HLP+
Sbjct: 189 PLGIITDRDLRNRVLAEGL-SDATPVRRVMSAPATVISADALAFEGLLLMLERGIHHLPL 247
Query: 246 VD 247
VD
Sbjct: 248 VD 249
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M A R+ +L++ GI+TD+D+ RV+A L+ + TPV +VM+ T + +D LA
Sbjct: 175 MRAERISSLIVEHDP---LGIITDRDLRNRVLAEGLS-DATPVRRVMSAPATVISADALA 230
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
E L M++ HLP+V+ ++ ++
Sbjct: 231 FEGLLLMLERGIHHLPLVDGERMVGVV 257
>gi|114707952|ref|ZP_01440844.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Fulvimarina pelagi HTCC2506]
gi|114536581|gb|EAU39713.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Fulvimarina pelagi HTCC2506]
Length = 607
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 54/91 (59%), Gaps = 7/91 (7%)
Query: 2 AARR-----VDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLS 56
AARR + +L +T+ + L GI+T +D++ +V+A L+ TPVS ++TRNP +
Sbjct: 164 AARRMRKHGISSLCMTE-HGKLTGIVTMRDLSGKVVAEGLS-PATPVSDIVTRNPVTLEP 221
Query: 57 DTLAVEALQKMVQGKFRHLPVVENGEVIALL 87
L + L MV+ HLP+ E GE++ ++
Sbjct: 222 SMLGSDVLHTMVERGIGHLPICEFGELVGIV 252
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 76/137 (55%), Gaps = 9/137 (6%)
Query: 131 FIETLRERMFRPSLSTIIPEKSKV---VTISPTDTVLMATKKMLELRLSSAVVTVENKPR 187
F T RER + +L+ E+ V +T +P DTV A ++M + +SS +T K
Sbjct: 126 FSRTPRERPPQRTLANTRIEELMVRGPITCAPDDTVQEAARRMRKHGISSLCMTEHGKLT 185
Query: 188 GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIV--DALHIMHDGKFLHLPV 245
GI+T +D+ +V+++ L + +T V ++T NP T++ ++ D LH M + HLP+
Sbjct: 186 GIVTMRDLSGKVVAEGL-SPATPVSDIVTRNP--VTLEPSMLGSDVLHTMVERGIGHLPI 242
Query: 246 VDRDGDVVDVVDVIHIT 262
+ G++V +V ++T
Sbjct: 243 CEF-GELVGIVTQTNLT 258
>gi|307595012|ref|YP_003901329.1| putative CBS domain-containing signal transduction protein
[Vulcanisaeta distributa DSM 14429]
gi|307550213|gb|ADN50278.1| putative signal transduction protein with CBS domains [Vulcanisaeta
distributa DSM 14429]
Length = 157
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 168 KKMLELRLSSAVVT-VENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDT 226
K M E + S +VT E + G+ T +D L+R+++ N+ ++ V VMT N D
Sbjct: 28 KIMNEKNIGSIIVTDEEGRAIGVFTERD-LLRLVASNVSLNALTVGDVMTRNVIVIEEDA 86
Query: 227 PIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILL 272
++ A+HIM HLP+VD DG V+ +V I AA+A LL
Sbjct: 87 SLIKAVHIMAKHGIRHLPIVDEDGKVIGIV---SIRDAAIALARLL 129
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + + ++++TD G+ T++D+ R++A ++L V VMTRN + D
Sbjct: 30 MNEKNIGSIIVTDEEGRAIGVFTERDL-LRLVASNVSLNALTVGDVMTRNVIVIEEDASL 88
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEKGK 108
++A+ M + RHLP+V E+G+VI ++ I A+AR+ + GK
Sbjct: 89 IKAVHIMAKHGIRHLPIVDEDGKVIGIVSIRDAAI-ALARLLVDMDIGK 136
>gi|254525290|ref|ZP_05137345.1| CBS domain containing protein [Stenotrophomonas sp. SKA14]
gi|219722881|gb|EED41406.1| CBS domain containing protein [Stenotrophomonas sp. SKA14]
Length = 143
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + A+L+ D A L GIL+++D A +++ R+ + +T V+++MT V
Sbjct: 31 MAEKGIGAVLVMD-GARLVGILSERDYARKIVLRDRSSRDTAVAEIMTAQVVTVSPGEQV 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL---DIAKCLYDAIAR 99
LQ + + RHLPVVE +V+ ++ D+ K + DA R
Sbjct: 90 EHCLQLVTDYRIRHLPVVEGAQVLGVISIGDLVKSVIDAQRR 131
>gi|385805343|ref|YP_005841741.1| inosine-5'-monophosphate dehydrogenase-like protein II
[Fervidicoccus fontis Kam940]
gi|383795206|gb|AFH42289.1| inosine-5'-monophosphate dehydrogenase related protein II
[Fervidicoccus fontis Kam940]
Length = 281
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVIS----QNLPAD 207
S V+++ P+DT+ A ML +S +V E K GILTS D L++ +S N+ D
Sbjct: 11 SPVISVLPSDTLAYARNLMLRHEISRLLVIDEGKLVGILTSSD-LLKALSVPEFSNVSWD 69
Query: 208 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
LV VM+ N I++ I DA +M L V+D +GDVV ++
Sbjct: 70 KILVRDVMSKNVITIKINSSISDAAALMKKYMIGSLAVIDNNGDVVGLI 118
>gi|336255188|ref|YP_004598295.1| signal transduction protein with CBS domains [Halopiger xanaduensis
SH-6]
gi|335339177|gb|AEH38416.1| putative signal transduction protein with CBS domains [Halopiger
xanaduensis SH-6]
Length = 136
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 166 ATKKMLELRLSSAVVTVE-NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATI 224
A + MLE + S VV E N+ GILTS D + +++Q+ P T VE+ MT + A+
Sbjct: 26 AGQVMLENNIGSVVVVGEHNELEGILTSTD-FVDIVAQSHPKAETTVERYMTEDVVTASA 84
Query: 225 DTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
I DA M + F HLPVVD D V+ +V
Sbjct: 85 QDSIRDAADTMIEHGFKHLPVVDEDEGVIGMV 116
>gi|224085680|ref|XP_002307661.1| predicted protein [Populus trichocarpa]
gi|222857110|gb|EEE94657.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 7/115 (6%)
Query: 160 TDTVLMATKKMLELRLSSAVVTVENKPR---GILTSKDILMRVISQNLPADSTLVEKVMT 216
TD+V A + M + + S VV + GI+T +D + ++I+Q + T V ++MT
Sbjct: 73 TDSVYDAVENMAKNNIGSLVVLKPGEQELIAGIITERDYMRKIIAQGRSSKYTRVGEIMT 132
Query: 217 PNPECATI--DTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
+ T+ DT I+ A+ +M D H+PV+ DG +V +V ++ + A V +
Sbjct: 133 DEDKLVTVTSDTSILQAMQLMTDHHIRHVPVI--DGKIVGMVSIVDVVRAVVEQQ 185
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 1 MAARRVDALLLT--DSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTF--VLS 56
MA + +L++ L+ GI+T++D ++IA+ + + T V ++MT V S
Sbjct: 83 MAKNNIGSLVVLKPGEQELIAGIITERDYMRKIIAQGRSSKYTRVGEIMTDEDKLVTVTS 142
Query: 57 DTLAVEALQKMVQGKFRHLPVVENGEVIALLDI 89
DT ++A+Q M RH+PV+ +G+++ ++ I
Sbjct: 143 DTSILQAMQLMTDHHIRHVPVI-DGKIVGMVSI 174
>gi|126435086|ref|YP_001070777.1| cyclic nucleotide-binding protein [Mycobacterium sp. JLS]
gi|126234886|gb|ABN98286.1| cyclic nucleotide-binding protein [Mycobacterium sp. JLS]
Length = 607
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 3/133 (2%)
Query: 142 PSLSTIIPE--KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRV 199
PS + E +V+T+ P TV A +M R+S A++ + + GI T +D+ RV
Sbjct: 143 PSAGQAVGEMVAGEVLTVDPHTTVREAVTQMTRHRVSYALIRLPDGGFGIFTDRDLRTRV 202
Query: 200 ISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVI 259
++ LP D + +VM+ T D L M + H+PV+ GDVV V++
Sbjct: 203 VAAGLPVD-VEINRVMSAPARTVTADLTAETVLMEMLESGVRHMPVLTGRGDVVGVLEDA 261
Query: 260 HITHAAVATEILL 272
+ A+ LL
Sbjct: 262 DLLAASARQGFLL 274
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 13/104 (12%)
Query: 20 GILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE 79
GI TD+D+ TRV+A L ++ +++VM+ V +D A L +M++ RH+PV+
Sbjct: 191 GIFTDRDLRTRVVAAGLPVD-VEINRVMSAPARTVTADLTAETVLMEMLESGVRHMPVLT 249
Query: 80 N-GEVIALLDIAKCLYDAIARMERAAEKG----KAIAAAVEGVE 118
G+V+ +L+ A L +A +G +AI +AV+ E
Sbjct: 250 GRGDVVGVLEDADLL-------AASARQGFLLRRAIGSAVDARE 286
>gi|108799432|ref|YP_639629.1| cyclic nucleotide-binding protein [Mycobacterium sp. MCS]
gi|119868545|ref|YP_938497.1| cyclic nucleotide-binding protein [Mycobacterium sp. KMS]
gi|108769851|gb|ABG08573.1| cyclic nucleotide-binding protein [Mycobacterium sp. MCS]
gi|119694634|gb|ABL91707.1| cyclic nucleotide-binding protein [Mycobacterium sp. KMS]
Length = 607
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 3/133 (2%)
Query: 142 PSLSTIIPE--KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRV 199
PS + E +V+T+ P TV A +M R+S A++ + + GI T +D+ RV
Sbjct: 143 PSAGQAVGEMVAGEVLTVDPHTTVREAVTQMTRHRVSYALIRLPDGGFGIFTDRDLRTRV 202
Query: 200 ISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVI 259
++ LP D + +VM+ T D L M + H+PV+ GDVV V++
Sbjct: 203 VAAGLPVD-VEINRVMSAPARTVTADLTAETVLMEMLESGVRHMPVLTGRGDVVGVLEDA 261
Query: 260 HITHAAVATEILL 272
+ A+ LL
Sbjct: 262 DLLAASARQGFLL 274
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 13/104 (12%)
Query: 20 GILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE 79
GI TD+D+ TRV+A L ++ +++VM+ V +D A L +M++ RH+PV+
Sbjct: 191 GIFTDRDLRTRVVAAGLPVD-VEINRVMSAPARTVTADLTAETVLMEMLESGVRHMPVLT 249
Query: 80 N-GEVIALLDIAKCLYDAIARMERAAEKG----KAIAAAVEGVE 118
G+V+ +L+ A L +A +G +AI +AV+ E
Sbjct: 250 GRGDVVGVLEDADLL-------AASARQGFLLRRAIGSAVDARE 286
>gi|398922044|ref|ZP_10660088.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM49]
gi|398929099|ref|ZP_10663757.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM48]
gi|398163542|gb|EJM51697.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM49]
gi|398167513|gb|EJM55573.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM48]
Length = 146
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + V ALL+ +++ +L GI++++D A +++ + TPV +M +P +
Sbjct: 34 MAEKNVGALLVVENDEVL-GIISERDYARKLVLHGRSSVGTPVRDIMV-SPVITVDTHQT 91
Query: 61 VE-ALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
VE L M + RHLPVVE G++I LL I + +AIA
Sbjct: 92 VETCLGIMSDRRLRHLPVVEGGKLIGLLSIGDLVKEAIA 130
>gi|153006662|ref|YP_001380987.1| hypothetical protein Anae109_3824 [Anaeromyxobacter sp. Fw109-5]
gi|152030235|gb|ABS28003.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Anaeromyxobacter sp. Fw109-5]
Length = 605
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 140 FRPSLSTIIPE--KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILM 197
FR +S + + K V + T TV A + M E +SS V V P GI+T +D
Sbjct: 146 FRADVSGAVEQLVKRPPVWVEETSTVRDAARIMREASISS--VLVRGAPAGIVTDRDFRN 203
Query: 198 RVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
RV++ +L +++L V P T+ TPI +A + D HLPVV R ++V VV
Sbjct: 204 RVLADDLGPETSLTRIVSRPL-RTVTVGTPIYEAWRTLLDAGVHHLPVV-RGDEIVGVV 260
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 19 CGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVV 78
GI+TD+D RV+A +L ET ++++++R V T EA + ++ HLPVV
Sbjct: 193 AGIVTDRDFRNRVLADDLG-PETSLTRIVSRPLRTVTVGTPIYEAWRTLLDAGVHHLPVV 251
Query: 79 ENGEVIALLDIAKCL 93
E++ ++ L
Sbjct: 252 RGDEIVGVVTAGDLL 266
>gi|378951751|ref|YP_005209239.1| inosine-5'-monophosphate dehydrogenase [Pseudomonas fluorescens
F113]
gi|359761765|gb|AEV63844.1| Inosine-5'-monophosphate dehydrogenase [Pseudomonas fluorescens
F113]
Length = 146
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + V ALL+ + +L GI++++D A +++ R + T VS +M +P +
Sbjct: 34 MAEKNVGALLVVKNEEVL-GIISERDYARKMVLRGRSSVGTKVSDIMV-SPVITIDPHQN 91
Query: 61 VE-ALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
VE L M + RHLPVVE+G+++ LL I + +AIA
Sbjct: 92 VETCLSIMTEKHLRHLPVVEDGKLVGLLSIGDLVKEAIA 130
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 5/122 (4%)
Query: 150 EKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADST 209
+ +V TISP D VL A +M E + + +V + GI++ +D +++ + + T
Sbjct: 14 KNQQVHTISPDDMVLQALMRMAEKNVGALLVVKNEEVLGIISERDYARKMVLRGRSSVGT 73
Query: 210 LVEKVMTPNPECATID--TPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
V +M +P TID + L IM + HLPVV+ DG +V ++ + + A+A
Sbjct: 74 KVSDIMV-SP-VITIDPHQNVETCLSIMTEKHLRHLPVVE-DGKLVGLLSIGDLVKEAIA 130
Query: 268 TE 269
+
Sbjct: 131 EQ 132
>gi|374988853|ref|YP_004964348.1| hypothetical protein SBI_06097 [Streptomyces bingchenggensis BCW-1]
gi|297159505|gb|ADI09217.1| hypothetical protein SBI_06097 [Streptomyces bingchenggensis BCW-1]
Length = 138
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 6 VDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQ 65
V AL + D N LCGILTD+DI +A + T ++ P ++ +D + L+
Sbjct: 33 VGALPIADENERLCGILTDRDIVVGCVAEGKDCSRTTAGELAKGTPRWIPADADVSDVLR 92
Query: 66 KMVQGKFRHLPVVENGE 82
+M Q K R LPV++ +
Sbjct: 93 EMEQNKIRRLPVIDKNK 109
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 157 ISPTDTVLMATKKMLELRLSSAVVTVEN-KPRGILTSKDILMRVISQNLPADSTLVEKVM 215
I + TV A + M +L + + + EN + GILT +DI++ +++ T ++
Sbjct: 15 IPKSQTVDRAAQLMRDLNVGALPIADENERLCGILTDRDIVVGCVAEGKDCSRTTAGELA 74
Query: 216 TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITH 263
P D + D L M K LPV+D++ +V ++ + H
Sbjct: 75 KGTPRWIPADADVSDVLREMEQNKIRRLPVIDKNKRLVGIISEADLAH 122
>gi|424030292|ref|ZP_17769776.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HENC-01]
gi|408881916|gb|EKM20771.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HENC-01]
Length = 623
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +R + + + + L G++TD+D+ +V+A+ L L TPV ++MT T + D
Sbjct: 182 MCSRPKSSCAVVEKSGELVGVITDRDMTMKVVAKGLPLT-TPVHQIMTSPVTVIDEDERI 240
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
+EA+ M++ R LPV+ G+V LL
Sbjct: 241 IEAISLMLEHNIRSLPVISKGQVCGLL 267
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 176 SSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIM 235
S AVV + G++T +D+ M+V+++ LP +T V ++MT D I++A+ +M
Sbjct: 189 SCAVVEKSGELVGVITDRDMTMKVVAKGLPL-TTPVHQIMTSPVTVIDEDERIIEAISLM 247
Query: 236 HDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILLDQIMR 277
+ LPV+ + G V ++ H+ H + L + +R
Sbjct: 248 LEHNIRSLPVISK-GQVCGLLTTTHLVHNHRTQSLFLIEKIR 288
>gi|407983659|ref|ZP_11164307.1| CBS domain protein [Mycobacterium hassiacum DSM 44199]
gi|407374771|gb|EKF23739.1| CBS domain protein [Mycobacterium hassiacum DSM 44199]
Length = 272
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 157 ISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMT 216
++P DTVL A + + R+ + V + + GI T +D+ +R + + L ST + +VMT
Sbjct: 3 LNPNDTVLEAARAIEANRIGAVAVQKDRRLVGIATDRDLTVRALGRGLDPSSTTISEVMT 62
Query: 217 PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
P+P + + DA+ +M + +P+V+ DG +V +V
Sbjct: 63 PSPLTLSPRDSVDDAIRLMKERNIRRIPLVE-DGRIVGMV 101
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 48/87 (55%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPV 77
L GI TD+D+ R + R L+ T +S+VMT +P + +A++ M + R +P+
Sbjct: 32 LVGIATDRDLTVRALGRGLDPSSTTISEVMTPSPLTLSPRDSVDDAIRLMKERNIRRIPL 91
Query: 78 VENGEVIALLDIAKCLYDAIARMERAA 104
VE+G ++ ++ + + + A +E A
Sbjct: 92 VEDGRIVGMVTLDDLILEEAAPLEELA 118
>gi|83954348|ref|ZP_00963068.1| Protein containing a CBS domain [Sulfitobacter sp. NAS-14.1]
gi|83841385|gb|EAP80555.1| Protein containing a CBS domain [Sulfitobacter sp. NAS-14.1]
Length = 144
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELN--LEETPVSKVMTRNPTFVLSDT 58
++ +R+ L+++ GIL+++DI R + RE L++T V +MTR+ D
Sbjct: 31 LSEKRIGTLVVSADGKTPDGILSERDIV-RTLGREGGGCLDDT-VEALMTRDLITCAKDE 88
Query: 59 LAVEALQKMVQGKFRHLPVVENGEVIALLDIA 90
A + L KM QG+FRH+PV+++G +I L+ +
Sbjct: 89 TADDILAKMTQGRFRHMPVLQDGVLIGLISLG 120
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 144 LSTIIPEKS--KVVTISPTDTVLMATKKMLELRLSSAVVTVENK-PRGILTSKDILMRVI 200
+S I+ K+ V T+ P + A + E R+ + VV+ + K P GIL+ +DI+ +
Sbjct: 3 VSQILKTKADDSVTTVKPGTRISQAAAMLSEKRIGTLVVSADGKTPDGILSERDIVRTLG 62
Query: 201 SQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIH 260
+ VE +MT + D D L M G+F H+PV+ +DG ++ ++ +
Sbjct: 63 REGGGCLDDTVEALMTRDLITCAKDETADDILAKMTQGRFRHMPVL-QDGVLIGLISLGD 121
Query: 261 ITHA 264
+ A
Sbjct: 122 VVKA 125
>gi|37677064|ref|NP_937460.1| signal-transduction protein [Vibrio vulnificus YJ016]
gi|37201609|dbj|BAC97430.1| predicted signal-transduction protein [Vibrio vulnificus YJ016]
Length = 621
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 4 RRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEA 63
+R ++ D N ++ G++TD+D+ V+A+E ++ E + VM NP + SD ++A
Sbjct: 186 QRSSCAVVMDGNDIV-GLVTDRDMTASVVAKEKDVSER-IESVMKLNPVLIESDAKVIQA 243
Query: 64 LQKMVQGKFRHLPVVENGEVIALL 87
+ M+Q R LPVV +G+V LL
Sbjct: 244 ISLMLQYNIRCLPVVNHGKVAGLL 267
>gi|52550006|gb|AAU83855.1| hypothetical protein GZ34G5_22 [uncultured archaeon GZfos34G5]
Length = 187
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 69/127 (54%), Gaps = 2/127 (1%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
+VVT S V A K+M + + S VV +P GI+T DIL ++S+++P + ++
Sbjct: 14 EVVTGSMNMNVTEAAKRMKKYDVDSIVVLKSGRPEGIVTQGDILSELVSKDIPPSAVKLK 73
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV-DVIHITHAAVATEIL 271
VMT A+ + P+ D + M GK LPV++ +G +V +V DV ++ ++ IL
Sbjct: 74 DVMTAPIITASSNDPLSDIVKKMARGKIRKLPVIE-NGKLVGIVADVDILSVSSQMNSIL 132
Query: 272 LDQIMRQ 278
D I Q
Sbjct: 133 ADLIEMQ 139
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 40/68 (58%)
Query: 20 GILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE 79
GI+T DI + ++++++ + VMT S+ + ++KM +GK R LPV+E
Sbjct: 49 GIVTQGDILSELVSKDIPPSAVKLKDVMTAPIITASSNDPLSDIVKKMARGKIRKLPVIE 108
Query: 80 NGEVIALL 87
NG+++ ++
Sbjct: 109 NGKLVGIV 116
>gi|23011539|ref|ZP_00051869.1| COG0517: FOG: CBS domain [Magnetospirillum magnetotacticum MS-1]
Length = 143
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLE-ETPVSKVMTRNPTFVLSDTL 59
+A +++ AL++ D+ + GIL+++D+ R +AR+ + +S MT
Sbjct: 30 LAEKQIGALVVADAGGHVIGILSERDV-MRALARDGAAALDQSISHYMTAKVVTCTRRAS 88
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
+ ++ M +G+FRHLPVVE+G ++ ++ I + IA +E
Sbjct: 89 IEDVMETMTEGRFRHLPVVEDGHLVGVVSIGDVVKRRIAAVE 130
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 9/140 (6%)
Query: 143 SLSTIIPEKSK-VVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILMRVI 200
+++ I+ EK VVT+ P TV A + E ++ + VV GIL+ +D++ +
Sbjct: 2 TVARILAEKGNSVVTVPPHRTVDEAIHLLAEKQIGALVVADAGGHVIGILSERDVMRALA 61
Query: 201 SQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV---D 257
A + MT T I D + M +G+F HLPVV+ DG +V VV D
Sbjct: 62 RDGAAALDQSISHYMTAKVVTCTRRASIEDVMETMTEGRFRHLPVVE-DGHLVGVVSIGD 120
Query: 258 VIHITHAAVATEILLDQIMR 277
V+ AAV E Q MR
Sbjct: 121 VVKRRIAAVEAE---HQAMR 137
>gi|70606254|ref|YP_255124.1| hypothetical protein Saci_0416 [Sulfolobus acidocaldarius DSM 639]
gi|449066457|ref|YP_007433539.1| CBS domain-containing protein [Sulfolobus acidocaldarius N8]
gi|449068732|ref|YP_007435813.1| CBS domain-containing protein [Sulfolobus acidocaldarius Ron12/I]
gi|68566902|gb|AAY79831.1| CBS domain protein [Sulfolobus acidocaldarius DSM 639]
gi|449034965|gb|AGE70391.1| CBS domain-containing protein [Sulfolobus acidocaldarius N8]
gi|449037240|gb|AGE72665.1| CBS domain-containing protein [Sulfolobus acidocaldarius Ron12/I]
Length = 135
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 5/123 (4%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL 210
+S V+++ + K M E + S +VT NKP GI+T +DI+ R I + +ST
Sbjct: 16 RSPVISVDKKTKISEIAKIMTEKNIGSVIVTENNKPIGIITERDIV-RAIGKGKNLEST- 73
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEI 270
E++MT + D+PI AL +M HLPV++ D ++V ++ I A A +
Sbjct: 74 AEEIMTVSLITIREDSPIAGALSLMRQFNIRHLPVIN---DKRELVGILSIRDVARAIDN 130
Query: 271 LLD 273
LL+
Sbjct: 131 LLE 133
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 55/97 (56%), Gaps = 7/97 (7%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + + ++++T++N + GI+T++DI R I + NLE T ++MT + + D+
Sbjct: 35 MTEKNIGSVIVTENNKPI-GIITERDIV-RAIGKGKNLEST-AEEIMTVSLITIREDSPI 91
Query: 61 VEALQKMVQGKFRHLPVVENGE----VIALLDIAKCL 93
AL M Q RHLPV+ + ++++ D+A+ +
Sbjct: 92 AGALSLMRQFNIRHLPVINDKRELVGILSIRDVARAI 128
>gi|114766557|ref|ZP_01445514.1| CBS domain protein [Pelagibaca bermudensis HTCC2601]
gi|114541247|gb|EAU44298.1| CBS domain protein [Roseovarius sp. HTCC2601]
Length = 173
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 4 RRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETP-------VSKVMTRNPTFVLS 56
+R+ A+L+ D L GIL+++DI R L +TP V ++MT
Sbjct: 64 KRIGAILVKDPQGALVGILSERDIVRR-------LADTPGRTLPQRVEELMTPEVETCSP 116
Query: 57 DTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAI 110
D V L++M G+FRH+PV+E G ++ L+ I + + +E A K K +
Sbjct: 117 DESLVVVLRRMNDGRFRHMPVMEEGTLVGLISIGDVVNYRLTALEYEALKLKQL 170
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 71/129 (55%), Gaps = 17/129 (13%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRG----ILTSKDILMRVI---SQNLP 205
+VV I P +T+ A + + + R+ + +V P+G IL+ +DI+ R+ + LP
Sbjct: 44 EVVWIQPQETIGKAVEVLRDKRIGAILV---KDPQGALVGILSERDIVRRLADTPGRTLP 100
Query: 206 ADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV---DVIHIT 262
VE++MTP E + D +V L M+DG+F H+PV++ +G +V ++ DV++
Sbjct: 101 Q---RVEELMTPEVETCSPDESLVVVLRRMNDGRFRHMPVME-EGTLVGLISIGDVVNYR 156
Query: 263 HAAVATEIL 271
A+ E L
Sbjct: 157 LTALEYEAL 165
>gi|24374385|ref|NP_718428.1| putative nucleotidyltransferase DUF294 [Shewanella oneidensis MR-1]
gi|24348950|gb|AAN55872.1| putative nucleotidyltransferase DUF294 [Shewanella oneidensis MR-1]
Length = 620
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RV +LL+TD N L GILTDKD+ RV+A L+ + V + MT +P + S+ L
Sbjct: 176 MRNSRVSSLLVTD-NHKLVGILTDKDLRNRVLASGLD-GQIAVHQAMTTSPISISSNALI 233
Query: 61 VEALQKMVQGKFRHLPVVE 79
EA+ M + HLP+++
Sbjct: 234 FEAMLLMSEHNIHHLPIID 252
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
S +TI TV A M R+SS +VT +K GILT KD+ RV++ L V
Sbjct: 158 SSPITIDAHATVTQAALLMRNSRVSSLLVTDNHKLVGILTDKDLRNRVLASGLDG-QIAV 216
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
+ MT +P + + I +A+ +M + HLP++D
Sbjct: 217 HQAMTTSPISISSNALIFEAMLLMSEHNIHHLPIID 252
>gi|351722175|ref|NP_001236211.1| uncharacterized protein LOC100527191 [Glycine max]
gi|255631750|gb|ACU16242.1| unknown [Glycine max]
Length = 205
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 12/129 (9%)
Query: 143 SLSTIIPEKSK-----VVTISPTDTVLMATKKMLELRLSSAVVTVENKPR---GILTSKD 194
++S I+ +K K + + DTV A K M + + + VV + + GI+T +D
Sbjct: 55 TISDILNDKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKSDANKAIAGIITERD 114
Query: 195 ILMRVISQNLPADSTLVEKVMTPNPECATI--DTPIVDALHIMHDGKFLHLPVVDRDGDV 252
L ++I Q + ST V +MT + T+ DT ++ A+ +M D + H+PV+D G V
Sbjct: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVTPDTKVLQAMQLMTDKRIRHIPVIDEKGMV 174
Query: 253 --VDVVDVI 259
V + DV+
Sbjct: 175 GMVSIGDVV 183
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 1 MAARRVDALLL--TDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTF--VLS 56
M V AL++ +D+N + GI+T++D ++I + + + T V +MT V
Sbjct: 87 MTQNNVGALVVVKSDANKAIAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVTP 146
Query: 57 DTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMER 102
DT ++A+Q M + RH+PV++ ++ ++ I + A+ R R
Sbjct: 147 DTKVLQAMQLMTDKRIRHIPVIDEKGMVGMVSIGDVVR-AVVREHR 191
>gi|171186207|ref|YP_001795126.1| signal-transduction protein [Pyrobaculum neutrophilum V24Sta]
gi|170935419|gb|ACB40680.1| putative signal-transduction protein with CBS domains [Pyrobaculum
neutrophilum V24Sta]
Length = 139
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +V ++++ D GI+T++D+ V+AR L +TPV VMT +P + + L
Sbjct: 37 MYENKVGSVVVVDDEGRPVGIVTERDLVY-VVARALA-PDTPVWMVMTEDPVVINENALV 94
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALL 87
EA++KM Q RHLPVV++ G+++ ++
Sbjct: 95 TEAMEKMRQLDIRHLPVVDSAGKLVGMV 122
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTL 210
VVT + V +M E ++ S VV E +P GI+T +D L+ V+++ L D T
Sbjct: 19 KNVVTAKENERVREVAIRMYENKVGSVVVVDDEGRPVGIVTERD-LVYVVARALAPD-TP 76
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
V VMT +P + + +A+ M HLPVVD G +V +V
Sbjct: 77 VWMVMTEDPVVINENALVTEAMEKMRQLDIRHLPVVDSAGKLVGMV 122
>gi|432329216|ref|YP_007247360.1| CBS-domain-containing membrane protein [Aciduliprofundum sp.
MAR08-339]
gi|432135925|gb|AGB05194.1| CBS-domain-containing membrane protein [Aciduliprofundum sp.
MAR08-339]
Length = 421
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 108/242 (44%), Gaps = 53/242 (21%)
Query: 31 VIARE---LNLEETPVSKVMTRNPTFV-LSDTLAVEALQKMVQGKFRHLPVV-ENGEVIA 85
V+ARE + E V +VMTR+ V + DT+A +A+ KM + F LPV+ + GE++
Sbjct: 34 VLAREVIDMEPESIKVEEVMTRDVISVKIGDTIA-KAISKMQEHGFHELPVINDRGELVG 92
Query: 86 LLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLS 145
L+ Y + R K +I + VE V M +P
Sbjct: 93 FLN-----YRVLIR-----RKSLSIYSRVENV---------------------MVKPP-- 119
Query: 146 TIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLP 205
T+ P +++ K M++ S V +NK GI++ DIL R++ +
Sbjct: 120 ----------TVDPDASIVDVVKLMVDAGYRSIPVVRKNKLVGIISRTDIL-RLVPEMKE 168
Query: 206 ADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 265
VE VMT P+ ++PI A+ IM + +PVVD + +V +V H+ A+
Sbjct: 169 VADLPVEDVMTSEPDVVEENSPIEYAIDIMRKLGEMSVPVVDENRKLVGIV---HMRDAS 225
Query: 266 VA 267
A
Sbjct: 226 RA 227
>gi|115358872|ref|YP_776010.1| signal-transduction protein [Burkholderia ambifaria AMMD]
gi|115284160|gb|ABI89676.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria AMMD]
Length = 153
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+ + + + GI+T++D A +V+ ++ + + T V ++MT +V
Sbjct: 35 MAEKGIGALLVVEGDDI-AGIVTERDYARKVVLQDRSSKATRVEEIMTAKVRYVEPSQST 93
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
E + M + + RHLPV++ G++I L+ I + IA
Sbjct: 94 DECMALMTEHRMRHLPVLDGGKLIGLISIGDLVKSVIA 131
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+ T++ TD V A K M E + + +V + GI+T +D +V+ Q+ + +T VE+
Sbjct: 19 IYTVTKTDFVYDAIKLMAEKGIGALLVVEGDDIAGIVTERDYARKVVLQDRSSKATRVEE 78
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
+MT + + +M + + HLPV+D G ++ ++ + + + +A +
Sbjct: 79 IMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIADQ 133
>gi|398980397|ref|ZP_10688956.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM25]
gi|398134600|gb|EJM23747.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM25]
Length = 146
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + V ALL+ + + ++ GI++++D A +++ + TPV +M N V +
Sbjct: 34 MAEKNVGALLVVEDDKVV-GIISERDYARKLVLHGRSSVGTPVRDIMVANVITVDTHQTV 92
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
L M + RHLPVVE+G++I LL I + +AIA
Sbjct: 93 DTCLGIMSDKRLRHLPVVEDGKLIGLLSIGDLVKEAIA 130
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 5/122 (4%)
Query: 150 EKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADST 209
+ +V I P VL A KM E + + +V ++K GI++ +D +++ + T
Sbjct: 14 KNQEVHQIKPDHMVLEALMKMAEKNVGALLVVEDDKVVGIISERDYARKLVLHGRSSVGT 73
Query: 210 LVEKVMTPNPECATIDT-PIVD-ALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
V +M N T+DT VD L IM D + HLPVV+ DG ++ ++ + + A+A
Sbjct: 74 PVRDIMVAN--VITVDTHQTVDTCLGIMSDKRLRHLPVVE-DGKLIGLLSIGDLVKEAIA 130
Query: 268 TE 269
+
Sbjct: 131 EQ 132
>gi|114704331|ref|ZP_01437239.1| putative inosine-5`-monophosphate dehydrogenase protein
[Fulvimarina pelagi HTCC2506]
gi|114539116|gb|EAU42236.1| putative inosine-5`-monophosphate dehydrogenase protein
[Fulvimarina pelagi HTCC2506]
Length = 176
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 5/114 (4%)
Query: 141 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRV 199
RP S+ K K VT S +V A +M + + S VV + K G++T +D++ R+
Sbjct: 6 RPEFSS----KPKPVTFSADTSVAEAVAEMSKRDIGSVVVVGPDEKVEGLVTERDVMKRL 61
Query: 200 ISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVV 253
++Q +T + +MT A D ++D L IM + +F LPV+D D +V
Sbjct: 62 VNQGKDPKTTQLADIMTRELRMARADDDLLDWLRIMSNERFRRLPVIDADNRIV 115
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ R + ++++ + + G++T++D+ R++ + + + T ++ +MTR +D
Sbjct: 31 MSKRDIGSVVVVGPDEKVEGLVTERDVMKRLVNQGKDPKTTQLADIMTRELRMARADDDL 90
Query: 61 VEALQKMVQGKFRHLPVVE-NGEVIALL 87
++ L+ M +FR LPV++ + ++A++
Sbjct: 91 LDWLRIMSNERFRRLPVIDADNRIVAIM 118
>gi|255086147|ref|XP_002509040.1| predicted protein [Micromonas sp. RCC299]
gi|226524318|gb|ACO70298.1| predicted protein [Micromonas sp. RCC299]
Length = 158
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 183 ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP--ECATIDTPIVDALHIMHDGKF 240
E+ G+LT +D L +V++QN A +T V +MT + A DTP+++AL M +G+
Sbjct: 54 EDAVAGVLTERDYLRKVVAQNKDASTTAVGTIMTDKKLYDVAQTDTPVLEALRRMTEGRH 113
Query: 241 LHLPVVD 247
H+PVV+
Sbjct: 114 RHMPVVN 120
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 1 MAARRVDALLLTDSNA--LLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTF--VLS 56
M V ALLL + G+LT++D +V+A+ + T V +MT + +
Sbjct: 38 MTKANVGALLLVRGRWEDAVAGVLTERDYLRKVVAQNKDASTTAVGTIMTDKKLYDVAQT 97
Query: 57 DTLAVEALQKMVQGKFRHLPVVENGEVIALL----DIAKCLYDA 96
DT +EAL++M +G+ RH+PVV +A + D+ + + DA
Sbjct: 98 DTPVLEALRRMTEGRHRHMPVVNANRTMAGMLCIGDVTRMVVDA 141
>gi|254467169|ref|ZP_05080580.1| CBS domain protein [Rhodobacterales bacterium Y4I]
gi|206688077|gb|EDZ48559.1| CBS domain protein [Rhodobacterales bacterium Y4I]
Length = 144
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 12/92 (13%)
Query: 20 GILTDKDIATRVIARELNLE-----ETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRH 74
GIL+++DI REL+ E + PVS MTR + + E L++M +G+FRH
Sbjct: 50 GILSERDIV-----RELSKEGAACLDKPVSGYMTRELVTCTTQSNVGELLKQMTEGRFRH 104
Query: 75 LPVVENGEVIALLDIAKCLYDAIAR--MERAA 104
+PVVE+G+++ ++ + + +A+ ME+ A
Sbjct: 105 MPVVEDGKLVGIVTLGDAVKAQLAQVAMEKDA 136
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVEN-KPRGILTSKDILMRVISQNLPADSTL 210
+ VVT+ P +V A + + E + S VV+ + P GIL+ +DI+ + +
Sbjct: 13 TGVVTVKPDASVSDAARLLAENKFGSVVVSADGVTPDGILSERDIVRELSKEGAACLDKP 72
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV---DVIHITHAAVA 267
V MT T + + + L M +G+F H+PVV+ DG +V +V D + A VA
Sbjct: 73 VSGYMTRELVTCTTQSNVGELLKQMTEGRFRHMPVVE-DGKLVGIVTLGDAVKAQLAQVA 131
Query: 268 TE--ILLDQIM 276
E L D IM
Sbjct: 132 MEKDALQDMIM 142
>gi|347530042|ref|YP_004836790.1| hypothetical protein SLG_36580 [Sphingobium sp. SYK-6]
gi|345138724|dbj|BAK68333.1| conserved hypothetical protein [Sphingobium sp. SYK-6]
Length = 142
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A RR+ + + + +L GI +++D+ + L + PV VMT P + +DT
Sbjct: 30 LAERRIGCVPIVEDGRVL-GIFSERDVVYGLAREGAALLDKPVEAVMTTPPVTIDADTPI 88
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
+ AL M + + RHLP+V G +I + I + I R+E E
Sbjct: 89 LSALSLMTRRRIRHLPIVREGRMIGFVSIGDLVKSRIDRIESEVE 133
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
++ ++ TD+V + E R+ + + + GI + +D++ + + VE
Sbjct: 14 IIQVNRTDSVARVVALLAERRIGCVPIVEDGRVLGIFSERDVVYGLAREGAALLDKPVEA 73
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
VMT P DTPI+ AL +M + HLP+V R+G ++ V +
Sbjct: 74 VMTTPPVTIDADTPILSALSLMTRRRIRHLPIV-REGRMIGFVSI 117
>gi|152982340|ref|YP_001355250.1| hypothetical protein mma_3560 [Janthinobacterium sp. Marseille]
gi|151282417|gb|ABR90827.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 142
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA V A+++ D L+ GIL+++D A +V + + V +MT T V +
Sbjct: 31 MAVHDVGAMVVIDEGKLV-GILSERDYARKVALANKSSTDICVGDIMTSRVTTVSKEHTV 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
E + M G FRHLPV E G VI ++ I + + I+ E +
Sbjct: 90 EECMTLMSDGNFRHLPVTEKGFVIGVISIGDLVKEVISTQEETIQ 134
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 143 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVIS 201
++S ++ K+K + + + T L+ K++ + A+V + E K GIL+ +D +V
Sbjct: 3 TVSQLLMLKNKSLCSTCSRTPLIDALKIMAVHDVGAMVVIDEGKLVGILSERDYARKVAL 62
Query: 202 QNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHI 261
N + V +MT + + + + + +M DG F HLPV ++ G V+ V+ + +
Sbjct: 63 ANKSSTDICVGDIMTSRVTTVSKEHTVEECMTLMSDGNFRHLPVTEK-GFVIGVISIGDL 121
Query: 262 THAAVATE 269
++T+
Sbjct: 122 VKEVISTQ 129
>gi|410623904|ref|ZP_11334714.1| CBS domain-containing protein [Glaciecola pallidula DSM 14239 =
ACAM 615]
gi|410156600|dbj|GAC30088.1| CBS domain-containing protein [Glaciecola pallidula DSM 14239 =
ACAM 615]
Length = 610
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ +RV ++L+ + + LL GI+TD+D+ RV+A L+++ PV ++MT NP ++ +
Sbjct: 173 MSQKRVSSVLIIEHDQLL-GIVTDRDLRNRVVAVGLDMQ-LPVRQIMTENPAYLTQNKTL 230
Query: 61 VEALQKMVQGKFRHLPVVE 79
+A+ M + HLPV++
Sbjct: 231 FDAVCLMNEKSINHLPVLD 249
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL-VEK 213
+TIS + ++ A M + R+SS ++ ++ GI+T +D+ RV++ L D L V +
Sbjct: 158 ITISQSASIQRAGALMSQKRVSSVLIIEHDQLLGIVTDRDLRNRVVAVGL--DMQLPVRQ 215
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDR 248
+MT NP T + + DA+ +M++ HLPV+D+
Sbjct: 216 IMTENPAYLTQNKTLFDAVCLMNEKSINHLPVLDK 250
>gi|254560087|ref|YP_003067182.1| hypothetical protein METDI1604 [Methylobacterium extorquens DM4]
gi|254267365|emb|CAX23200.1| conserved hypothetical protein with 2 CBS domains [Methylobacterium
extorquens DM4]
Length = 143
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 53/96 (55%)
Query: 6 VDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQ 65
+ AL++ + GI++++DI + A + PVS+ MTR +T E ++
Sbjct: 35 IGALVVMGEARTVVGIISERDIMHALAAHGATALDLPVSRQMTRKVVTCRRETTNDEVMR 94
Query: 66 KMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
M +G+FRH+PV E+G+++ ++ I + +A +E
Sbjct: 95 LMTEGRFRHMPVCESGKLVGIISIHDVIERQLAVLE 130
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 63/123 (51%), Gaps = 13/123 (10%)
Query: 143 SLSTIIPEK-SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPR-GILTSKDILMRVI 200
+++ I+ EK S VVT+ P D + A + E + + VV E + GI++ +DI+ +
Sbjct: 2 TVAHILAEKGSSVVTVRPDDPLADAIHLLTENGIGALVVMGEARTVVGIISERDIMHALA 61
Query: 201 SQ-----NLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDV 255
+ +LP + KV+T E T + + +M +G+F H+PV + G +V +
Sbjct: 62 AHGATALDLPVSRQMTRKVVTCRRE-----TTNDEVMRLMTEGRFRHMPVCE-SGKLVGI 115
Query: 256 VDV 258
+ +
Sbjct: 116 ISI 118
>gi|160875862|ref|YP_001555178.1| hypothetical protein Sbal195_2751 [Shewanella baltica OS195]
gi|378709064|ref|YP_005273958.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella baltica OS678]
gi|418023658|ref|ZP_12662642.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella baltica OS625]
gi|160861384|gb|ABX49918.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella baltica OS195]
gi|315268053|gb|ADT94906.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella baltica OS678]
gi|353536531|gb|EHC06089.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella baltica OS625]
Length = 615
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RV +LL+TD N L GILTDKD+ RV+A L+ V + MT +P + S+ L
Sbjct: 176 MRNSRVSSLLVTD-NHKLVGILTDKDLRNRVLAVGLD-GHIAVHQAMTVSPISISSNALI 233
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
EA+ M + HLP+++ + I ++
Sbjct: 234 FEAMLLMSEHNIHHLPIIDQDKAIGMV 260
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
S + I +V A M R+SS +VT +K GILT KD+ RV++ L V
Sbjct: 158 SAPIVIDAHASVTQAALLMRNSRVSSLLVTDNHKLVGILTDKDLRNRVLAVGLDG-HIAV 216
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEIL 271
+ MT +P + + I +A+ +M + HLP++D+D + V + +L
Sbjct: 217 HQAMTVSPISISSNALIFEAMLLMSEHNIHHLPIIDQDKAIGMVTSTDILRGQGSQPLLL 276
Query: 272 LDQIMRQQ 279
+ +I RQQ
Sbjct: 277 IGEIERQQ 284
>gi|392308049|ref|ZP_10270583.1| inosine-5'-monophosphate dehydrogenase [Pseudoalteromonas citrea
NCIMB 1889]
Length = 612
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ + +L++TD + LL G++TD+D+ RV+A L+ PV +MT P F+ +
Sbjct: 175 MSRHGISSLIITDGSQLL-GLITDRDLRNRVLAVGLD-PSLPVETIMTEKPKFIFENNRV 232
Query: 61 VEALQKMVQGKFRHLPVVENGEV 83
AL M++ HLPV++ V
Sbjct: 233 FSALHLMLKHNIHHLPVLDEEYV 255
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTL- 210
++V+T ++ A + M +SS ++T ++ G++T +D+ RV++ L D +L
Sbjct: 157 AQVITSHKLLSIAEAAQVMSRHGISSLIITDGSQLLGLITDRDLRNRVLAVGL--DPSLP 214
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
VE +MT P+ + + ALH+M HLPV+D +
Sbjct: 215 VETIMTEKPKFIFENNRVFSALHLMLKHNIHHLPVLDEE 253
>gi|153005808|ref|YP_001380133.1| signal transduction protein [Anaeromyxobacter sp. Fw109-5]
gi|152029381|gb|ABS27149.1| putative signal transduction protein with CBS domains
[Anaeromyxobacter sp. Fw109-5]
Length = 141
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKV 214
VTI +T++ A +KM EL + + V E GILT +D+ +R + T V
Sbjct: 12 VTIGVDETLVAAARKMKELGVGALPVLAEGTLTGILTDRDLTVRATAAGADPRRTRVRDA 71
Query: 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA--AVATEIL 271
MTP T D + +A H M L V+DR+G + ++ V + A A+A E+L
Sbjct: 72 MTPQVVACTEDDELAEAAHAMEACAVRRLIVLDREGRLCGMLSVEDLAGASTALAAEVL 130
>gi|261403128|ref|YP_003247352.1| putative signal transduction protein with CBS domains
[Methanocaldococcus vulcanius M7]
gi|261370121|gb|ACX72870.1| putative signal transduction protein with CBS domains
[Methanocaldococcus vulcanius M7]
Length = 194
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 170 MLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIV 229
M E + + V+ +NKP GILT +DI+ RV+S+NL L E+VM+ + I
Sbjct: 33 MTEHNIGAVVIVEDNKPVGILTERDIVKRVVSKNLKPKEVLAEEVMSKKIITIHQNASIT 92
Query: 230 DALHIMHDGKFLHLPVVDRDGDVVDVV---DVIHIT 262
+A IM LPVV +DG+++ ++ D+I I+
Sbjct: 93 EAAKIMAKYGVKRLPVV-KDGNLMGIITQSDIIKIS 127
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + A+++ + N + GILT++DI RV+++ L +E +VM++ + +
Sbjct: 33 MTEHNIGAVVIVEDNKPV-GILTERDIVKRVVSKNLKPKEVLAEEVMSKKIITIHQNASI 91
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
EA + M + + LPVV++G ++ ++
Sbjct: 92 TEAAKIMAKYGVKRLPVVKDGNLMGII 118
>gi|421808270|ref|ZP_16244121.1| CBS domain protein [Acinetobacter baumannii OIFC035]
gi|410415850|gb|EKP67631.1| CBS domain protein [Acinetobacter baumannii OIFC035]
Length = 143
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 3/137 (2%)
Query: 144 LSTIIPEKSK--VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVIS 201
++ +I KS+ + TISP TVL A M E + + VV K GIL+ +D +V
Sbjct: 4 VAQVIKNKSEQAIFTISPEATVLEAITIMAEKGIGALVVAEGEKVVGILSERDYTRKVTL 63
Query: 202 QNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHI 261
+ ST V ++MT ++ + + L +M D HLPV+D +G +V + + +
Sbjct: 64 MERSSYSTTVAEIMTAKVITVGLNNTVEECLQLMTDRHLRHLPVLD-NGKLVGFISIGDL 122
Query: 262 THAAVATEILLDQIMRQ 278
AA+ + +L + ++Q
Sbjct: 123 VKAAMEDQKVLIEQLKQ 139
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + AL++ + ++ GIL+++D +V E + T V+++MT V +
Sbjct: 32 MAEKGIGALVVAEGEKVV-GILSERDYTRKVTLMERSSYSTTVAEIMTAKVITVGLNNTV 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIA 90
E LQ M RHLPV++NG+++ + I
Sbjct: 91 EECLQLMTDRHLRHLPVLDNGKLVGFISIG 120
>gi|255034048|ref|YP_003084669.1| putative signal transduction protein [Dyadobacter fermentans DSM
18053]
gi|254946804|gb|ACT91504.1| putative signal transduction protein with CBS domains [Dyadobacter
fermentans DSM 18053]
Length = 140
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+ +++ +TV A + M E + + +V +N+ GI + +D +VI Q + TL+
Sbjct: 9 IWSVTQDNTVFEALELMAEKNIGAVLVLEDNELIGIFSERDYARKVILQGRASKDTLIRD 68
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
VMT D I + + IM D HLP V+RDG +V ++ + I A +
Sbjct: 69 VMTARVITVETDAKIEECMQIMSDKHIRHLP-VNRDGRLVGIISINDIVSAII 120
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + A+L+ + N L+ GI +++D A +VI + ++T + VMT V +D
Sbjct: 25 MAEKNIGAVLVLEDNELI-GIFSERDYARKVILQGRASKDTLIRDVMTARVITVETDAKI 83
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDI 89
E +Q M RHLPV +G ++ ++ I
Sbjct: 84 EECMQIMSDKHIRHLPVNRDGRLVGIISI 112
>gi|170700325|ref|ZP_02891337.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria IOP40-10]
gi|170134759|gb|EDT03075.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria IOP40-10]
Length = 153
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+ + + + GI+T++D A +V+ ++ + + T V ++MT +V
Sbjct: 35 MAEKGIGALLVVEGDDI-AGIVTERDYARKVVLQDRSSKATRVEEIMTAKVRYVEPSQST 93
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
E + M + + RHLPV++ G++I L+ I + IA
Sbjct: 94 DECMALMTEHRMRHLPVLDGGKLIGLISIGDLVKSVIA 131
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+ T++ D V A K M E + + +V + GI+T +D +V+ Q+ + +T VE+
Sbjct: 19 IYTVTKNDFVYDAIKLMAEKGIGALLVVEGDDIAGIVTERDYARKVVLQDRSSKATRVEE 78
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
+MT + + +M + + HLPV+D G ++ ++ + + + +A +
Sbjct: 79 IMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIADQ 133
>gi|452976056|gb|EME75872.1| CBS domain-containing protein YhcV [Bacillus sonorensis L12]
Length = 141
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ V A+ + D +L G++TD+DI R A+ + +TPVS+VMT N D
Sbjct: 28 MSQHNVGAIPVVDQ-GVLKGMITDRDITLRTTAQGQD-GQTPVSEVMTTNVVSGNPDMSL 85
Query: 61 VEALQKMVQGKFRHLPVVENGE---VIALLDIA 90
EA Q M Q + R LP+VEN ++AL D+A
Sbjct: 86 QEASQLMAQSQIRRLPIVENNHLVGIVALGDLA 118
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
+V T+S TV A + M + + + V + +G++T +DI +R +Q T V
Sbjct: 11 QVATVSSNQTVQEAAELMSQHNVGAIPVVDQGVLKGMITDRDITLRTTAQGQDGQ-TPVS 69
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
+VMT N D + +A +M + LP+V+ +
Sbjct: 70 EVMTTNVVSGNPDMSLQEASQLMAQSQIRRLPIVENN 106
>gi|16126862|ref|NP_421426.1| hypothetical protein CC_2626 [Caulobacter crescentus CB15]
gi|13424202|gb|AAK24594.1| CBS domain protein [Caulobacter crescentus CB15]
Length = 157
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Query: 4 RRVDALLLTDSNALLCGILTDKDIATRVIARELNLEET-PVSKVMTRNPTFVLSDTLAVE 62
R+V A+++ D + GI++++DI R++A+E T P+S M+ N F D
Sbjct: 47 RKVGAMVVVDDKEAVVGIVSERDI-VRMVAKEGAAALTKPISGCMSANVVFAQPDETIDA 105
Query: 63 ALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113
L++M + RHLPVV+N + ++ I + I + AE KA AA
Sbjct: 106 LLERMTDRRIRHLPVVQNDRLAGIISIGDLVKYKIQATQAEAEGLKAYIAA 156
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 6/131 (4%)
Query: 144 LSTIIPEKSKVV-TISPTDTVLMATKKMLELRLSSAVVTVENKPR--GILTSKDILMRVI 200
+S I+ +K +V T SP +TV A +L R A+V V++K GI++ +DI+ V
Sbjct: 17 VSQILKDKGDLVFTASPQETV-GAAAALLHTRKVGAMVVVDDKEAVVGIVSERDIVRMVA 75
Query: 201 SQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVV--DRDGDVVDVVDV 258
+ A + + M+ N A D I L M D + HLPVV DR ++ + D+
Sbjct: 76 KEGAAALTKPISGCMSANVVFAQPDETIDALLERMTDRRIRHLPVVQNDRLAGIISIGDL 135
Query: 259 IHITHAAVATE 269
+ A E
Sbjct: 136 VKYKIQATQAE 146
>gi|83311131|ref|YP_421395.1| CBS domain-containing protein [Magnetospirillum magneticum AMB-1]
gi|82945972|dbj|BAE50836.1| CBS domain [Magnetospirillum magneticum AMB-1]
Length = 143
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA +V A+L+ D GI T++D+ + A + ETPV MT +P +
Sbjct: 30 MAAFKVGAVLVVDDKDNTLGIFTERDVTRCLAAHGARILETPVGDHMTPDPMTCRASDSV 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113
+ M FRH+PV++ G++ ++ I + +++ R E AE +A A
Sbjct: 90 ASVMSSMSTHHFRHMPVMDGGKMTGIVSIRDLVSNSLERAEFEAEALRAYVTA 142
>gi|407798524|ref|ZP_11145431.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Oceaniovalibus guishaninsula JLT2003]
gi|407059485|gb|EKE45414.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Oceaniovalibus guishaninsula JLT2003]
Length = 601
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 5 RVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEAL 64
R+ +L++ + + L GILT +D++ RV+A L+ ++PV++VMTR+P + D + + L
Sbjct: 167 RISSLMVVE-DGTLQGILTVRDVSNRVVAERLD-AQSPVARVMTRDPVTLPPDAIGSDVL 224
Query: 65 QKMVQGKFRHLPVVENGEVIALL 87
M++ H+P+V G ++ ++
Sbjct: 225 HLMMERGIGHVPIVGAGGLVGIV 247
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 156 TISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVM 215
TI+P + A + M + R+SS +V + +GILT +D+ RV+++ L A S V +VM
Sbjct: 149 TIAPDLPLCDAARLMRDDRISSLMVVEDGTLQGILTVRDVSNRVVAERLDAQSP-VARVM 207
Query: 216 TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG 250
T +P D D LH+M + H+P+V G
Sbjct: 208 TRDPVTLPPDAIGSDVLHLMMERGIGHVPIVGAGG 242
>gi|326317834|ref|YP_004235506.1| CBS domain-containing protein [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323374670|gb|ADX46939.1| CBS domain containing protein [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 149
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + ALL+ D ++ GI+T++D A +V +T V+ VMTR FV +
Sbjct: 32 MADKGIGALLVMDGKSI-AGIVTERDYARKVALLGRTSGDTRVADVMTRAVRFVRPVQTS 90
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERAAEK 106
+ L M + + RHLPVV E+G ++ L+ I + D I+ + E+
Sbjct: 91 GQCLALMSENRLRHLPVVEEDGTLVGLISIGDLVKDVISEQQFIIEQ 137
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 59/126 (46%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
+V TI+P+D++L A + M + + + +V GI+T +D +V + T V
Sbjct: 15 EVFTIAPSDSMLDALRLMADKGIGALLVMDGKSIAGIVTERDYARKVALLGRTSGDTRVA 74
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILL 272
VMT L +M + + HLPVV+ DG +V ++ + + ++ + +
Sbjct: 75 DVMTRAVRFVRPVQTSGQCLALMSENRLRHLPVVEEDGTLVGLISIGDLVKDVISEQQFI 134
Query: 273 DQIMRQ 278
+ M Q
Sbjct: 135 IEQMEQ 140
>gi|388511535|gb|AFK43829.1| unknown [Lotus japonicus]
Length = 205
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 161 DTVLMATKKMLELRLSSAVVTV---ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP 217
DTV A K M + + + VV E GI+T +D L ++I Q + ST V +MT
Sbjct: 78 DTVYEAVKSMTQNNVGALVVVKPAEEKSIAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
Query: 218 NPECATI--DTPIVDALHIMHDGKFLHLPVVDRDG--DVVDVVDVIH 260
+ T+ DT ++ A+ +M D + H+PV+D G +V + DV+
Sbjct: 138 ENKLITVTPDTRVLRAMQLMTDNRIRHIPVIDGKGMLGMVSIGDVVR 184
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMTRNPTF--VLSDTLAVEALQKMVQGKFRHL 75
+ GI+T++D ++I + + + T V +MT V DT + A+Q M + RH+
Sbjct: 106 IAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVTPDTRVLRAMQLMTDNRIRHI 165
Query: 76 PVVENGEVIALLDIA 90
PV++ ++ ++ I
Sbjct: 166 PVIDGKGMLGMVSIG 180
>gi|359455324|ref|ZP_09244559.1| CBS domain-containing protein [Pseudoalteromonas sp. BSi20495]
gi|358047667|dbj|GAA80808.1| CBS domain-containing protein [Pseudoalteromonas sp. BSi20495]
Length = 612
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M V ++++T +A L G++TD+D+ RV+A E+N ++ VS +MT P F+ +
Sbjct: 175 MKQHGVSSIMIT-QHAHLVGVVTDRDLRNRVLADEVNPQDA-VSSIMTAKPKFIFENNRV 232
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALL 87
AL M++ HLPV+ EN + I ++
Sbjct: 233 FSALHLMLKHNIHHLPVLDENHKPIGMI 260
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 89/195 (45%), Gaps = 28/195 (14%)
Query: 67 MVQGKFRHLPVVENGEVIA----------LLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116
+ QG + P + GE I + +++ +D + R ++ E+ A A
Sbjct: 75 LAQGDYFGFPSLLTGEAIQNRLAVQKEGIVYMLSQTHFDFLRREYKSFEQYFVRAHANRL 134
Query: 117 VEKHWGTSISGPNTFIE-TLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRL 175
+ H+ S +++ E + E M R + +T++P ++ + KKM + +
Sbjct: 135 LSSHYK---SKNDSWSERKISELMARTA-----------ITLAPDASIRQSAKKMKQHGV 180
Query: 176 SSAVVTVENKPRGILTSKDILMRVISQNL-PADSTLVEKVMTPNPECATIDTPIVDALHI 234
SS ++T G++T +D+ RV++ + P D+ V +MT P+ + + ALH+
Sbjct: 181 SSIMITQHAHLVGVVTDRDLRNRVLADEVNPQDA--VSSIMTAKPKFIFENNRVFSALHL 238
Query: 235 MHDGKFLHLPVVDRD 249
M HLPV+D +
Sbjct: 239 MLKHNIHHLPVLDEN 253
>gi|254413385|ref|ZP_05027156.1| CBS domain pair protein [Coleofasciculus chthonoplastes PCC 7420]
gi|196180005|gb|EDX74998.1| CBS domain pair protein [Coleofasciculus chthonoplastes PCC 7420]
Length = 501
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 63/122 (51%), Gaps = 6/122 (4%)
Query: 140 FRPSLSTIIPEKS---KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDIL 196
F P L+ + KS + ++P V ++ E + S +V E + GI T +D
Sbjct: 4 FSPLLAQLSQSKSIDRHPLIVTPQMRVTEVINRLNEHQSSYVLVVQEKRLVGIFTERD-F 62
Query: 197 MRVISQNLPADSTLVEKVMTPNPECATIDTP--IVDALHIMHDGKFLHLPVVDRDGDVVD 254
+R+ +Q L ++ ++ VMTP+P +ID I L+++ HLPV+D+ G+++
Sbjct: 63 VRIAAQQLSLENLSIQSVMTPDPITVSIDQDQGIFSILYLLRQHHIRHLPVIDKGGEIIG 122
Query: 255 VV 256
V+
Sbjct: 123 VI 124
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 117/272 (43%), Gaps = 52/272 (19%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVL--SDTLAVEALQKMVQGKFRHL 75
L GI T++D R+ A++L+LE + VMT +P V D L + Q RHL
Sbjct: 53 LVGIFTERDFV-RIAAQQLSLENLSIQSVMTPDPITVSIDQDQGIFSILYLLRQHHIRHL 111
Query: 76 PVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIET 134
PV++ GE+I ++ K I V+ P ++
Sbjct: 112 PVIDKGGEIIGVI------------------TPKTIREVVQ------------PTDLLKF 141
Query: 135 LRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVT-VENK----PRGI 189
R ++ ++ S+V+ S T ++L T++ML + S V+T +N P+GI
Sbjct: 142 KR-------VADVM--TSQVIQNSVTASLLEITQQMLTHKKSCIVITETQNNADIVPQGI 192
Query: 190 LTSKDIL-MRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDR 248
+T +DI+ + + N S E VM+ ID ++ A +M K L VVD
Sbjct: 193 ITERDIIQFQKMGINFAITS--AETVMSTPLLPIKIDDSMMLANEMMKRHKIRRLVVVDE 250
Query: 249 DGDVVDVVDVIHITHAAVATEILLD-QIMRQQ 279
G + ++ I A E+ +++RQQ
Sbjct: 251 AGRLAGIITQSTILEALNPIEMYATVELLRQQ 282
>gi|453051896|gb|EME99391.1| hypothetical protein H340_16746 [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 142
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 6 VDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQ 65
V AL ++D N LCGI+TD+DI + +A + + ++ P +V ++ E ++
Sbjct: 33 VGALPVSDENERLCGIITDRDIVVKCVAEGHDASRCTAADLVQGTPRWVDANASVEEVVE 92
Query: 66 KMVQGKFRHLPVVENGEVIALL---DIAKCL 93
+M R LPV+EN ++ ++ D+A+ L
Sbjct: 93 EMGNHHVRRLPVIENKRLVGMISEADVARNL 123
>gi|374335199|ref|YP_005091886.1| hypothetical protein GU3_06900 [Oceanimonas sp. GK1]
gi|372984886|gb|AEY01136.1| hypothetical protein GU3_06900 [Oceanimonas sp. GK1]
Length = 623
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 12 TDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGK 71
+D+ + GI+TD+D+ TRV+A +L TPVS+VM+ + SD EA+ M++
Sbjct: 191 SDAEQEVAGIITDRDLRTRVLAEQLP-SATPVSEVMSTDLVAAESDQYVFEAMLTMLRCN 249
Query: 72 FRHLPVVENGE---VIALLDIAK 91
HLPV+ G V+AL D+ +
Sbjct: 250 LHHLPVLHRGRPIGVVALSDVLR 272
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVV-----TVENKPRGILTSKDILMRVISQNLPADST 209
V+I +V A +KM + +SS +V E + GI+T +D+ RV+++ LP+ +T
Sbjct: 161 VSIGCAASVFDAARKMTDEGVSSILVLKEGSDAEQEVAGIITDRDLRTRVLAEQLPS-AT 219
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
V +VM+ + A D + +A+ M HLPV+ R G + VV
Sbjct: 220 PVSEVMSTDLVAAESDQYVFEAMLTMLRCNLHHLPVLHR-GRPIGVV 265
>gi|393722761|ref|ZP_10342688.1| signal-transduction protein [Sphingomonas sp. PAMC 26605]
Length = 142
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A RRV A+ + + +A++ GI +++D+ + A + V++ MT P V D
Sbjct: 30 LAERRVGAVPVMEGDAVV-GIFSERDVIHAIAAHGGDAMTRSVAETMTAPPITVAPDEAV 88
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
+ AL M + + RHLPVV+ G VI + I + I ++E AE
Sbjct: 89 IGALSLMTRRRIRHLPVVDQGRVIGFVSIGDLVKYRIDKIEADAE 133
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Query: 143 SLSTIIPEKSK-VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVIS 201
+++ I+ K + VV+I+ +V A + E R+ + V + GI + +D++ + +
Sbjct: 2 TIAAILSSKGREVVSITAKQSVGDAVALLAERRVGAVPVMEGDAVVGIFSERDVIHAIAA 61
Query: 202 QNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
A + V + MT P D ++ AL +M + HLPVVD+ G V+ V +
Sbjct: 62 HGGDAMTRSVAETMTAPPITVAPDEAVIGALSLMTRRRIRHLPVVDQ-GRVIGFVSI 117
>gi|429200941|ref|ZP_19192600.1| CBS domain protein [Streptomyces ipomoeae 91-03]
gi|428663416|gb|EKX62780.1| CBS domain protein [Streptomyces ipomoeae 91-03]
Length = 142
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 6 VDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQ 65
V AL ++D N LCGILTD+DI +A + + + P ++ ++ E LQ
Sbjct: 33 VGALPISDENERLCGILTDRDIVVGCVAMGHDPSKVTAGDLAKGTPRWIDANADISEVLQ 92
Query: 66 KMVQGKFRHLPVVENGEVIALL---DIAKCL 93
+M + R LPV+EN ++ ++ D+A+ L
Sbjct: 93 EMKGHQIRRLPVIENKRLVGMISEADLARNL 123
>gi|406037632|ref|ZP_11044996.1| hypothetical protein AparD1_11924 [Acinetobacter parvus DSM 16617 =
CIP 108168]
Length = 143
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 2/125 (1%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+ TISP TVL A K M + + + VV + K GI + +D ++ ++STLV
Sbjct: 16 IFTISPNATVLEAIKIMADKGVGALVVAEDEKVVGIFSERDYTRKIALMERTSESTLVSD 75
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE-ILL 272
+MT +++ + + L +M D HLPV+D++ +V + + + AA+ + IL+
Sbjct: 76 IMTSKVISVSLNHTVEECLQLMTDRHLRHLPVLDQE-KLVGFISIGDLVKAAMEDQRILI 134
Query: 273 DQIMR 277
+Q+ +
Sbjct: 135 EQLQQ 139
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + V AL++ + ++ GI +++D ++ E E T VS +MT V +
Sbjct: 32 MADKGVGALVVAEDEKVV-GIFSERDYTRKIALMERTSESTLVSDIMTSKVISVSLNHTV 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIA 90
E LQ M RHLPV++ +++ + I
Sbjct: 91 EECLQLMTDRHLRHLPVLDQEKLVGFISIG 120
>gi|294631308|ref|ZP_06709868.1| signal-transduction protein with CBS domains [Streptomyces sp. e14]
gi|292834641|gb|EFF92990.1| signal-transduction protein with CBS domains [Streptomyces sp. e14]
Length = 131
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 12/100 (12%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRV-IARELNLEET---PVSKVMTRNPTFVLS 56
M+ARRV A ++ D +A GILT++DI V + + ++E + V+ P++ L
Sbjct: 27 MSARRVGAAVVHDPDAGGIGILTERDILNSVGLGQNPDIEHAHAHTTTDVVFAAPSWTLE 86
Query: 57 DTLAVEALQKMVQGKFRHLPVVENGE---VIALLDIAKCL 93
EA + M G FRHL V+E+GE V+++ DI +C
Sbjct: 87 -----EAARAMAHGGFRHLIVLEDGEPTGVVSVRDIIRCW 121
>gi|78067585|ref|YP_370354.1| KpsF/GutQ family sugar isomerase [Burkholderia sp. 383]
gi|77968330|gb|ABB09710.1| Sugar isomerase, KpsF/GutQ family [Burkholderia sp. 383]
Length = 327
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 3 ARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVE 62
A+R+ + D++ + GI TD D+ RV+AR+ + P++ VMTR P V D LAVE
Sbjct: 232 AKRLGMTAVVDADGKVAGIFTDGDL-RRVLARDGDFRTLPITDVMTRGPRTVAPDHLAVE 290
Query: 63 ALQKMVQGKFRHLPVVE-NGEVIALLDI 89
A++ M + + + VV+ +G +I L++
Sbjct: 291 AVELMERHRINQMLVVDADGVLIGALNM 318
>gi|304315356|ref|YP_003850503.1| CBS domain-containing protein [Methanothermobacter marburgensis
str. Marburg]
gi|302588815|gb|ADL59190.1| CBS domain-containing protein [Methanothermobacter marburgensis
str. Marburg]
Length = 187
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
S V+T P +V A M E ++ S +V ++P G++T DI+ +V+S++L A +
Sbjct: 15 SNVITADPGISVAEAASIMTEKKVGSIIVKSNSEPEGLITESDIIRKVVSKDLAASKVTI 74
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV---DVIHITHAAVAT 268
+VM+ N + + DA +M LPVV +DG +V ++ DV+ + A T
Sbjct: 75 GEVMSRNLISIEPERELSDAARLMAKNSIRRLPVV-KDGALVGILTSSDVMMV--APELT 131
Query: 269 EILLDQ 274
EIL++
Sbjct: 132 EILVEN 137
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ++V ++++ SN+ G++T+ DI +V++++L + + +VM+RN + +
Sbjct: 33 MTEKKVGSIIVK-SNSEPEGLITESDIIRKVVSKDLAASKVTIGEVMSRNLISIEPEREL 91
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
+A + M + R LPVV++G ++ +L
Sbjct: 92 SDAARLMAKNSIRRLPVVKDGALVGIL 118
>gi|303279450|ref|XP_003059018.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460178|gb|EEH57473.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 243
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 188 GILTSKDILMRVISQNLPADSTLVEKVMTPNPE--CATIDTPIVDALHIMHDGKFLHLPV 245
G++T +D L ++++++ A +T V VMT E A++DTP+++A+ M +G+ HLPV
Sbjct: 145 GVVTERDYLHKIVAKHGDASTTKVGDVMTAKDEINVASVDTPVLEAMRAMIEGRHRHLPV 204
Query: 246 VDRD 249
+++D
Sbjct: 205 MNKD 208
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMT-RNPTFVLS-DTLAVEALQKMVQGKFRHL 75
+ G++T++D +++A+ + T V VMT ++ V S DT +EA++ M++G+ RHL
Sbjct: 143 VAGVVTERDYLHKIVAKHGDASTTKVGDVMTAKDEINVASVDTPVLEAMRAMIEGRHRHL 202
Query: 76 PVVENGEVIA 85
PV+ +A
Sbjct: 203 PVMNKDRTMA 212
>gi|414071271|ref|ZP_11407243.1| CBS domain-containing protein [Pseudoalteromonas sp. Bsw20308]
gi|410806345|gb|EKS12339.1| CBS domain-containing protein [Pseudoalteromonas sp. Bsw20308]
Length = 612
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M V ++++T +A L G++TD+D+ RV+A E+N ++ VS +MT P F+ +
Sbjct: 175 MKQHGVSSIMIT-QHAHLVGVVTDRDLRNRVLADEVNPQDA-VSSIMTAKPKFIFENNRV 232
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALL 87
AL M++ HLPV+ EN + I ++
Sbjct: 233 FSALHLMLKHNIHHLPVLDENHKPIGMI 260
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 28/196 (14%)
Query: 66 KMVQGKFRHLPVVENGEVIA----------LLDIAKCLYDAIARMERAAEKGKAIAAAVE 115
++ QG + P + GE I + +++ +D + R ++ E+ A A
Sbjct: 74 RLAQGDYFGFPSLLTGEAIQNRLAVQKEGIVYMLSQTHFDFLRREYKSFEQYFVRAHANR 133
Query: 116 GVEKHWGTSISGPNTFIE-TLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELR 174
+ H+ S +++ E + E M R + +T++P ++ + KKM +
Sbjct: 134 LLSSHYK---SKNDSWSERKISELMARTA-----------ITLAPDASIRQSAKKMKQHG 179
Query: 175 LSSAVVTVENKPRGILTSKDILMRVISQNL-PADSTLVEKVMTPNPECATIDTPIVDALH 233
+SS ++T G++T +D+ RV++ + P D+ V +MT P+ + + ALH
Sbjct: 180 VSSIMITQHAHLVGVVTDRDLRNRVLADEVNPQDA--VSSIMTAKPKFIFENNRVFSALH 237
Query: 234 IMHDGKFLHLPVVDRD 249
+M HLPV+D +
Sbjct: 238 LMLKHNIHHLPVLDEN 253
>gi|392946580|ref|ZP_10312222.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Frankia sp. QA3]
gi|392289874|gb|EIV95898.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Frankia sp. QA3]
Length = 128
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAAR+V A ++ D+++ GILT++DI R IA E + + +TR+ F
Sbjct: 27 MAARKVGAAVVHDADSQGYGILTERDI-LRSIAAEQDPDVEIAGDHLTRDVVFADPGWSL 85
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL---DIAKCL 93
EA M++G FRHL V G V +L D+ +C
Sbjct: 86 DEAAASMLRGGFRHLIVTSGGGVAGILSMRDVVRCW 121
>gi|291279824|ref|YP_003496659.1| signal transduction protein [Deferribacter desulfuricans SSM1]
gi|290754526|dbj|BAI80903.1| signal transduction protein [Deferribacter desulfuricans SSM1]
Length = 147
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + ++L+ D + ++ GI T++D A ++I + ++TP+ +VMT + +
Sbjct: 32 MADNNIGSVLVMDGDKMV-GIFTERDYARKLILKGKYSKDTPIKEVMTEKVISIKPEATT 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIA 90
L M + + RHLPV+++G+VI L+ I
Sbjct: 91 EACLALMTEKRIRHLPVMQDGKVIGLISIG 120
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 11/112 (9%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVI-----SQNLPA 206
+++ T+S TV A K M + + S +V +K GI T +D ++I S++ P
Sbjct: 14 NQIFTVSADSTVYDALKVMADNNIGSVLVMDGDKMVGIFTERDYARKLILKGKYSKDTPI 73
Query: 207 DSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
+ EKV++ PE T L +M + + HLPV+ +DG V+ ++ +
Sbjct: 74 KEVMTEKVISIKPEATT-----EACLALMTEKRIRHLPVM-QDGKVIGLISI 119
>gi|374855295|dbj|BAL58156.1| CBS domain containing protein [uncultured Acidobacteria bacterium]
Length = 155
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 12/131 (9%)
Query: 151 KSKVVTISPTDTVLMATK--KMLEL---RLSSAVVTVENKP-RGILTSKDILMRVISQNL 204
K + + +SP V M T+ ++LEL R + V+ E + RGI T +D++ +++ L
Sbjct: 11 KIRELPLSPPVCVAMGTQVGEVLELMKRRRAHCVLICEGEHLRGIFTERDVVNKIL--GL 68
Query: 205 PAD-STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV---DVIH 260
P D +E MTP+P + + +A+ +M +G + H+P+V DG V V+ D+I+
Sbjct: 69 PVDLRAPIESFMTPSPVTLHPEDRVWEAMRLMDEGGYRHIPLVVEDGRVAGVISVQDIIN 128
Query: 261 ITHAAVATEIL 271
TE+
Sbjct: 129 FLAEHFPTEVF 139
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RR +L+ + L GI T++D+ +++ ++L P+ MT +P + +
Sbjct: 36 MKRRRAHCVLICEGEHLR-GIFTERDVVNKILGLPVDLR-APIESFMTPSPVTLHPEDRV 93
Query: 61 VEALQKMVQGKFRHLP-VVENGEVIALLDI 89
EA++ M +G +RH+P VVE+G V ++ +
Sbjct: 94 WEAMRLMDEGGYRHIPLVVEDGRVAGVISV 123
>gi|56460285|ref|YP_155566.1| signal protein [Idiomarina loihiensis L2TR]
gi|56179295|gb|AAV82017.1| Signaling protein with a cAMP-binding, CBS domains and predicted
nucleotidyltransferase domain [Idiomarina loihiensis
L2TR]
Length = 610
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKV 214
V++S + +V A K M +SS +V + + GILT +D+ RV+++ LP D V V
Sbjct: 157 VSLSSSTSVQEAAKLMASHGISSVLVVDDTQLVGILTDRDLRNRVVAEGLPLD-VRVSSV 215
Query: 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILLDQ 274
MT PE + ++DAL M HLPVV+ V +V + + + L
Sbjct: 216 MTQLPESVYENRSLMDALTTMTSSNIHHLPVVNDQNQPVGMVTATDLIRQQRSDPVFLIS 275
Query: 275 IMRQ 278
+R+
Sbjct: 276 AIRK 279
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA+ + ++L+ D L+ GILTD+D+ RV+A L L+ VS VMT+ P V +
Sbjct: 172 MASHGISSVLVVDDTQLV-GILTDRDLRNRVVAEGLPLD-VRVSSVMTQLPESVYENRSL 229
Query: 61 VEALQKMVQGKFRHLPVVEN 80
++AL M HLPVV +
Sbjct: 230 MDALTTMTSSNIHHLPVVND 249
>gi|296284630|ref|ZP_06862628.1| CBS [Citromicrobium bathyomarinum JL354]
Length = 121
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 10 LLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQ 69
++ DS AL+ G++TD+DIA R +A+ N + V +VMT +P V +D E KM
Sbjct: 11 VVDDSGALV-GVVTDRDIACRCVAK-GNSSDQRVEEVMTSSPVTVTADASVDECCTKMED 68
Query: 70 GKFRHLPVVEN-GE---VIALLDIAK 91
+ R LPV+++ G+ ++A DIA+
Sbjct: 69 NQVRRLPVIDDEGKCCGIVAQADIAR 94
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 188 GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
G++T +DI R +++ +D VE+VMT +P T D + + M D + LPV+D
Sbjct: 20 GVVTDRDIACRCVAKGNSSDQ-RVEEVMTSSPVTVTADASVDECCTKMEDNQVRRLPVID 78
Query: 248 RDGDVVDVVDVIHITHAAVATE 269
+G +V I +A E
Sbjct: 79 DEGKCCGIVAQADIARSAAEKE 100
>gi|332527070|ref|ZP_08403152.1| signal-transduction protein [Rubrivivax benzoatilyticus JA2]
gi|332111502|gb|EGJ11485.1| signal-transduction protein [Rubrivivax benzoatilyticus JA2]
Length = 136
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+AA + ALL+ D L+ G+++++D +V + N ET V+++MTR+ V
Sbjct: 25 LAAHEIGALLVMDGGRLV-GVVSERDYTRKVALQGRNSRETRVAEIMTRDVVRVPPAAPM 83
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMER 102
E + M + + RHLPVV+ V+ ++ + L + IA ER
Sbjct: 84 HECMALMSEHRIRHLPVVDGSTVLGMISMRDLLDELIAEQER 125
>gi|255570875|ref|XP_002526389.1| conserved hypothetical protein [Ricinus communis]
gi|223534251|gb|EEF35965.1| conserved hypothetical protein [Ricinus communis]
Length = 206
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 161 DTVLMATKKMLELRLSSAVVTVENKPR---GILTSKDILMRVISQNLPADSTLVEKVMTP 217
DTV A K M + + VV + + GI+T +D L ++I Q + ST V +MT
Sbjct: 79 DTVYDAVKSMTHHNVGALVVVKPGEQKSIAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 138
Query: 218 NPECATI--DTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
+ T+ DT ++ A+ +M D + H+PV++ D D+V ++ + + A VA
Sbjct: 139 ENKLITVTPDTKVLRAMQLMTDNRIRHIPVIN-DKDMVGMLSIGDVVRAVVA 189
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMTRNPTF--VLSDTLAVEALQKMVQGKFRHL 75
+ GI+T++D ++I + + + T V +MT V DT + A+Q M + RH+
Sbjct: 107 IAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMTDNRIRHI 166
Query: 76 PVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116
PV+ + +++ +L I + +A E+ + A ++G
Sbjct: 167 PVINDKDMVGMLSIGDVVRAVVAEHREELER---LNAYIQG 204
>gi|392536762|ref|ZP_10283899.1| inosine-5'-monophosphate dehydrogenase [Pseudoalteromonas marina
mano4]
Length = 612
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 15 NALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRH 74
+A L G++TD+D+ RV+A E++ +E VS +MT NP F+ + AL M++ H
Sbjct: 188 HAHLVGVVTDRDLRNRVLADEVDPQEA-VSSIMTTNPKFIFENNRVFSALHLMLKYNIHH 246
Query: 75 LPVVE 79
LPV++
Sbjct: 247 LPVLD 251
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNL-PADSTLVEK 213
+T+SP ++ + KKM E +SS +V G++T +D+ RV++ + P ++ V
Sbjct: 160 ITLSPDASIRQSAKKMKEHGVSSIMVIQHAHLVGVVTDRDLRNRVLADEVDPQEA--VSS 217
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
+MT NP+ + + ALH+M HLPV+D
Sbjct: 218 IMTTNPKFIFENNRVFSALHLMLKYNIHHLPVLD 251
>gi|71906263|ref|YP_283850.1| CBS [Dechloromonas aromatica RCB]
gi|71845884|gb|AAZ45380.1| CBS protein [Dechloromonas aromatica RCB]
Length = 143
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA V ALL+ D L+ GI +++D A ++I + +ET V ++M+ +V +
Sbjct: 31 MAQHEVGALLVLDGEQLV-GIFSERDYARKIILQGKTSKETLVREIMSDRVAYVTPGSTL 89
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIA 98
E + M + +FRHLPV+ E G ++ ++ I + + I+
Sbjct: 90 DECMALMTEKRFRHLPVLDEQGGIVGMISIGDLVKETIS 128
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 54/102 (52%)
Query: 157 ISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMT 216
++P+DTV A M + + + +V + GI + +D ++I Q + TLV ++M+
Sbjct: 18 VAPSDTVYHALTVMAQHEVGALLVLDGEQLVGIFSERDYARKIILQGKTSKETLVREIMS 77
Query: 217 PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
T + + + + +M + +F HLPV+D G +V ++ +
Sbjct: 78 DRVAYVTPGSTLDECMALMTEKRFRHLPVLDEQGGIVGMISI 119
>gi|389579933|ref|ZP_10169960.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Desulfobacter postgatei 2ac9]
gi|389401568|gb|EIM63790.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Desulfobacter postgatei 2ac9]
Length = 627
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 1 MAARRVDALLLTDS----NALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLS 56
M+ RV ++L+ L GI+TD+D+ RVIA+ L+L + VS++MT NP + S
Sbjct: 183 MSQNRVSSILIYHEPERREQKLIGIVTDRDLRNRVIAKGLDLNDR-VSEIMTENPATINS 241
Query: 57 DTLAVEALQKMVQGKFRHLPVVENGEVIALL 87
A +A +M + H+PV+ N + ++
Sbjct: 242 SDFAFKAQLQMARYNVHHIPVMANNRLAGMI 272
>gi|359449229|ref|ZP_09238727.1| CBS domain-containing protein [Pseudoalteromonas sp. BSi20480]
gi|358045012|dbj|GAA74976.1| CBS domain-containing protein [Pseudoalteromonas sp. BSi20480]
Length = 612
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 15 NALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRH 74
+A L G++TD+D+ RV+A E++ +E VS +MT NP F+ + AL M++ H
Sbjct: 188 HAHLVGVVTDRDLRNRVLADEVDPQEA-VSSIMTTNPKFIFENNRVFSALHLMLKYNIHH 246
Query: 75 LPVVE 79
LPV++
Sbjct: 247 LPVLD 251
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNL-PADSTLVEK 213
+T+SP ++ + KKM E +SS +V G++T +D+ RV++ + P ++ V
Sbjct: 160 ITLSPDASIRQSAKKMKEHGVSSIMVIQHAHLVGVVTDRDLRNRVLADEVDPQEA--VSS 217
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
+MT NP+ + + ALH+M HLPV+D
Sbjct: 218 IMTTNPKFIFENNRVFSALHLMLKYNIHHLPVLD 251
>gi|119468876|ref|ZP_01611901.1| hypothetical protein ATW7_03912 [Alteromonadales bacterium TW-7]
gi|119447528|gb|EAW28795.1| hypothetical protein ATW7_03912 [Alteromonadales bacterium TW-7]
Length = 612
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 15 NALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRH 74
+A L G++TD+D+ RV+A E++ +E VS +MT NP F+ + AL M++ H
Sbjct: 188 HAHLVGVVTDRDLRNRVLADEVDPQEA-VSSIMTTNPKFIFENNRVFSALHLMLKYNIHH 246
Query: 75 LPVVE 79
LPV++
Sbjct: 247 LPVLD 251
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNL-PADSTLVEK 213
+T+SP ++ + KKM E +SS +V G++T +D+ RV++ + P ++ V
Sbjct: 160 ITLSPDASIRQSAKKMKEHGVSSIMVIQHAHLVGVVTDRDLRNRVLADEVDPQEA--VSS 217
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
+MT NP+ + + ALH+M HLPV+D
Sbjct: 218 IMTTNPKFIFENNRVFSALHLMLKYNIHHLPVLD 251
>gi|289192998|ref|YP_003458939.1| signal transduction protein with CBS domains [Methanocaldococcus
sp. FS406-22]
gi|288939448|gb|ADC70203.1| putative signal transduction protein with CBS domains
[Methanocaldococcus sp. FS406-22]
Length = 194
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
V+T + TV M E + + V+ NKP GI+T +DI+ RV+S+NL L E+
Sbjct: 17 VITATKDMTVYEIANIMTENNIGAVVIVENNKPIGIVTERDIVKRVVSKNLKPKDVLAEE 76
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV---DVIHIT 262
VM+ + I +A IM LPVV +DG++V +V D++ ++
Sbjct: 77 VMSKKIITIPQNASITEAAKIMATHGVKRLPVV-KDGELVGIVTQSDIVRVS 127
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + A+++ ++N + GI+T++DI RV+++ L ++ +VM++ + +
Sbjct: 33 MTENNIGAVVIVENNKPI-GIVTERDIVKRVVSKNLKPKDVLAEEVMSKKIITIPQNASI 91
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
EA + M + LPVV++GE++ ++
Sbjct: 92 TEAAKIMATHGVKRLPVVKDGELVGIV 118
>gi|357116495|ref|XP_003560016.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
[Brachypodium distachyon]
Length = 205
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 161 DTVLMATKKMLELRLSSAVVTVENKPR---GILTSKDILMRVISQNLPADSTLVEKVMTP 217
DTV A K M + + + VV + + GI+T +D L ++I Q + ST V +MT
Sbjct: 78 DTVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKIIVQGRSSKSTKVGDIMTE 137
Query: 218 NPECATI--DTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
+ T+ DT ++ A+ +M D + H+PV+D G +V +V + I A V+
Sbjct: 138 ENKLITVKPDTRVLQAMQLMTDKRIRHIPVIDSTG-MVGMVSIGDIVRAVVS 188
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 1 MAARRVDALLLT--DSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTF--VLS 56
M V AL++ + + GI+T++D ++I + + + T V +MT V
Sbjct: 87 MTQHNVGALVVVKPGQDKSIAGIVTERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVKP 146
Query: 57 DTLAVEALQKMVQGKFRHLPVVENGEVIALLDIA 90
DT ++A+Q M + RH+PV+++ ++ ++ I
Sbjct: 147 DTRVLQAMQLMTDKRIRHIPVIDSTGMVGMVSIG 180
>gi|300311579|ref|YP_003775671.1| hypothetical protein Hsero_2264 [Herbaspirillum seropedicae SmR1]
gi|300074364|gb|ADJ63763.1| CBS domain containing protein [Herbaspirillum seropedicae SmR1]
Length = 170
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M A V AL + D + L G++TD+DI R +AR+ E TP+++VM+ + + D
Sbjct: 31 MEALDVGALPVCDGDQRLVGLVTDRDIVLRGVARKRLTETTPLTEVMSHDVLWCYEDEPV 90
Query: 61 VEALQKMVQGKFRHLPVVENGE----VIALLDIA 90
+ L MVQ + R LPV++ + +++L D+A
Sbjct: 91 DDVLDDMVQRQIRRLPVMDRQKNLVGMVSLGDVA 124
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Query: 154 VVTISPTDTVLMATKKMLELRLSS-AVVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
V T+ P DTV+ A + M L + + V + + G++T +DI++R +++ ++T +
Sbjct: 15 VHTLKPDDTVIRAAQAMEALDVGALPVCDGDQRLVGLVTDRDIVLRGVARKRLTETTPLT 74
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
+VM+ + D P+ D L M + LPV+DR ++V +V
Sbjct: 75 EVMSHDVLWCYEDEPVDDVLDDMVQRQIRRLPVMDRQKNLVGMV 118
>gi|221235645|ref|YP_002518082.1| hypothetical protein CCNA_02709 [Caulobacter crescentus NA1000]
gi|220964818|gb|ACL96174.1| CBS domain containing protein [Caulobacter crescentus NA1000]
Length = 143
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Query: 4 RRVDALLLTDSNALLCGILTDKDIATRVIARELNLEET-PVSKVMTRNPTFVLSDTLAVE 62
R+V A+++ D + GI++++DI R++A+E T P+S M+ N F D
Sbjct: 33 RKVGAMVVVDDKEAVVGIVSERDI-VRMVAKEGAAALTKPISGCMSANVVFAQPDETIDA 91
Query: 63 ALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113
L++M + RHLPVV+N + ++ I + I + AE KA AA
Sbjct: 92 LLERMTDRRIRHLPVVQNDRLAGIISIGDLVKYKIQATQAEAEGLKAYIAA 142
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 6/131 (4%)
Query: 144 LSTIIPEKSKVV-TISPTDTVLMATKKMLELRLSSAVVTVENKPR--GILTSKDILMRVI 200
+S I+ +K +V T SP +TV A +L R A+V V++K GI++ +DI+ V
Sbjct: 3 VSQILKDKGDLVFTASPQETV-GAAAALLHTRKVGAMVVVDDKEAVVGIVSERDIVRMVA 61
Query: 201 SQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVV--DRDGDVVDVVDV 258
+ A + + M+ N A D I L M D + HLPVV DR ++ + D+
Sbjct: 62 KEGAAALTKPISGCMSANVVFAQPDETIDALLERMTDRRIRHLPVVQNDRLAGIISIGDL 121
Query: 259 IHITHAAVATE 269
+ A E
Sbjct: 122 VKYKIQATQAE 132
>gi|99078228|ref|YP_611486.1| signal-transduction protein [Ruegeria sp. TM1040]
gi|99035366|gb|ABF62224.1| putative signal-transduction protein with CBS domains [Ruegeria sp.
TM1040]
Length = 174
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 14/108 (12%)
Query: 4 RRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETP-------VSKVMTRNPTFVLS 56
R + ALL+ ++ L GIL+++DI R L +TP V +M+R+ +
Sbjct: 65 RGIGALLVKNAQGDLVGILSERDIVRR-------LADTPGATLPQTVEGLMSRDVITATT 117
Query: 57 DTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAA 104
D VE L+ M G+FRH+PV+E +++ ++ I + + +E A
Sbjct: 118 DQSVVEVLRLMTDGRFRHMPVLEQEQLVGMITIGDVVNFRLTALEYEA 165
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 81/159 (50%), Gaps = 6/159 (3%)
Query: 119 KHWGTSISGPNTFIETLRERMF--RPSLSTIIPEKS-KVVTISPTDTVLMATKKMLELRL 175
K G+ S T +TL M R ++ ++ K+ ++ I+P DTV A + + + +
Sbjct: 8 KTRGSETSDKKTSSQTLDTNMSAARATVGDVLASKNGELYWINPEDTVAKAVEVLRDRGI 67
Query: 176 SSAVV-TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHI 234
+ +V + GIL+ +DI+ R+ VE +M+ + AT D +V+ L +
Sbjct: 68 GALLVKNAQGDLVGILSERDIVRRLADTPGATLPQTVEGLMSRDVITATTDQSVVEVLRL 127
Query: 235 MHDGKFLHLPVVDRDG--DVVDVVDVIHITHAAVATEIL 271
M DG+F H+PV++++ ++ + DV++ A+ E L
Sbjct: 128 MTDGRFRHMPVLEQEQLVGMITIGDVVNFRLTALEYEAL 166
>gi|374628282|ref|ZP_09700667.1| CBS domain containing protein [Methanoplanus limicola DSM 2279]
gi|373906395|gb|EHQ34499.1| CBS domain containing protein [Methanoplanus limicola DSM 2279]
Length = 273
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPV 77
L GI+T KD+ + +ET +S +MT +P V DT EA + M++ FR LPV
Sbjct: 37 LVGIITRKDLLRKA-------DETQLSLLMTSDPLTVPPDTTIEEAAEIMIKRNFRRLPV 89
Query: 78 VENGEVIALLDIAKCLYDAIARMERAAE 105
VENG+++ +L +A L A+++ + + E
Sbjct: 90 VENGKLLGILSVAD-LVGAVSQTKNSEE 116
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 175 LSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHI 234
+S VT E + GI+T KD+L + AD T + +MT +P DT I +A I
Sbjct: 26 ISGVPVTKEGRLVGIITRKDLLRK-------ADETQLSLLMTSDPLTVPPDTTIEEAAEI 78
Query: 235 MHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
M F LPVV+ +G ++ ++ V + A T+
Sbjct: 79 MIKRNFRRLPVVE-NGKLLGILSVADLVGAVSQTK 112
>gi|163853013|ref|YP_001641056.1| KpsF/GutQ family protein [Methylobacterium extorquens PA1]
gi|240140354|ref|YP_002964833.1| arabinose-5-phosphate isomerase [Methylobacterium extorquens AM1]
gi|418063140|ref|ZP_12700855.1| KpsF/GutQ family protein [Methylobacterium extorquens DSM 13060]
gi|163664618|gb|ABY31985.1| KpsF/GutQ family protein [Methylobacterium extorquens PA1]
gi|240010330|gb|ACS41556.1| Arabinose-5-phosphate isomerase [Methylobacterium extorquens AM1]
gi|373561485|gb|EHP87719.1| KpsF/GutQ family protein [Methylobacterium extorquens DSM 13060]
Length = 340
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 3 ARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVE 62
A+ ++L+ D L GILTD D+ V +RE L+ PV VMT NP + +TL +
Sbjct: 246 AKGFGSVLVVDEKGALAGILTDGDVRRAVFSRE-GLDRLPVEAVMTANPRTITPETLLAK 304
Query: 63 ALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
ALQ K L VV+ G + L+ L +A
Sbjct: 305 ALQIQEAMKITALVVVDQGRPVGLVHYHDLLRTGVA 340
>gi|410618903|ref|ZP_11329829.1| CBS domain-containing protein [Glaciecola polaris LMG 21857]
gi|410161542|dbj|GAC33967.1| CBS domain-containing protein [Glaciecola polaris LMG 21857]
Length = 611
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M+ V +L++TD L+ GILTD+DI RV+A++ ++ + VS+VMTR+P +
Sbjct: 174 MSHSSVSSLVITDKQTLV-GILTDRDIRNRVVAQQTDVNLS-VSEVMTRDPVKINDQRTL 231
Query: 61 VEALQKMVQGKFRHLPVVENGEVIAL 86
+AL M + HLPVV+ + L
Sbjct: 232 FDALCMMTEHNVHHLPVVDKNTGVPL 257
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 162 TVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPEC 221
++L +KM +SS V+T + GILT +DI RV++Q + + V +VMT +P
Sbjct: 166 SILQGVQKMSHSSVSSLVITDKQTLVGILTDRDIRNRVVAQQTDVNLS-VSEVMTRDPVK 224
Query: 222 ATIDTPIVDALHIMHDGKFLHLPVVDRDGDV 252
+ DAL +M + HLPVVD++ V
Sbjct: 225 INDQRTLFDALCMMTEHNVHHLPVVDKNTGV 255
>gi|407803686|ref|ZP_11150519.1| KpsF/GutQ family protein [Alcanivorax sp. W11-5]
gi|407022289|gb|EKE34043.1| KpsF/GutQ family protein [Alcanivorax sp. W11-5]
Length = 323
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 11 LTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQG 70
+TD++ L GI TD D+ + +++L E+P+S VMT P + + LA EAL+ M Q
Sbjct: 235 ITDTDGRLAGIFTDGDLRRVLDQPQVDLRESPISAVMTAGPVVIHTGHLAAEALKVMEQK 294
Query: 71 KFRHLPVV-ENGEVIALLDIAKCLYDAI 97
K L VV E+G + L++ L +
Sbjct: 295 KINGLIVVDEDGRPVGALNMHDLLRAGV 322
>gi|418056360|ref|ZP_12694413.1| putative signal transduction protein with CBS domains
[Hyphomicrobium denitrificans 1NES1]
gi|353209579|gb|EHB74982.1| putative signal transduction protein with CBS domains
[Hyphomicrobium denitrificans 1NES1]
Length = 143
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 55/101 (54%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+++R++ A+++ + + GI++++DI + + + P S+ MTR+ +
Sbjct: 30 LSSRKIGAIVIVGDSGKVAGIISERDIIRLIAEHGADALKMPASRGMTRDVVSCTKTSTI 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
E ++ M G+FRHLPV+E+ ++ ++ I + A +E
Sbjct: 90 EEIMETMTHGRFRHLPVIEDDVLVGIVSIGDIVKHHTAEVE 130
Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 12/113 (10%)
Query: 144 LSTIIPEKSK-VVTISPTDTVLMATKKMLELRLSS----AVVTV--ENKPRGILTSKDIL 196
+ I+ K++ V+T P D++ + + LRLSS A+V V K GI++ +DI+
Sbjct: 3 IGQILKSKARGVMTACPEDSI-----QEIALRLSSRKIGAIVIVGDSGKVAGIISERDII 57
Query: 197 MRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
+ A + MT + T + I + + M G+F HLPV++ D
Sbjct: 58 RLIAEHGADALKMPASRGMTRDVVSCTKTSTIEEIMETMTHGRFRHLPVIEDD 110
>gi|224127037|ref|XP_002319991.1| predicted protein [Populus trichocarpa]
gi|222858367|gb|EEE95914.1| predicted protein [Populus trichocarpa]
Length = 205
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 74/144 (51%), Gaps = 12/144 (8%)
Query: 135 LRERMFRPS-LSTIIPEKSK-----VVTISPTDTVLMATKKMLELRLSSAVVTVENKPR- 187
+ E F + ++ I+ EK K + + DTV A K M + + + VV + +
Sbjct: 46 IEEHGFESTRIADILKEKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKS 105
Query: 188 --GILTSKDILMRVISQNLPADSTLVEKVMTPNPECATI--DTPIVDALHIMHDGKFLHL 243
GI+T +D L ++I Q + ST V +MT + T+ DT ++ A+ +M D + H+
Sbjct: 106 IAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVTPDTKVLKAMQLMTDKRIRHI 165
Query: 244 PVVDRDGDVVDVVDVIHITHAAVA 267
PV+D D +++ +V + + A V+
Sbjct: 166 PVID-DKEMIGMVSIGDVVRAVVS 188
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMTRNPTF--VLSDTLAVEALQKMVQGKFRHL 75
+ GI+T++D ++I + + + T V +MT V DT ++A+Q M + RH+
Sbjct: 106 IAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVTPDTKVLKAMQLMTDKRIRHI 165
Query: 76 PVVENGEVIALLDIA 90
PV+++ E+I ++ I
Sbjct: 166 PVIDDKEMIGMVSIG 180
>gi|440231667|ref|YP_007345460.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Serratia marcescens FGI94]
gi|440053372|gb|AGB83275.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Serratia marcescens FGI94]
Length = 628
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 16 ALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHL 75
A + G+LTD+D+ TRVIA+ L+++ TPVS++MT + + EA+ M++ HL
Sbjct: 200 ARMAGMLTDRDLRTRVIAKGLSVD-TPVSEIMTPELIYGEHHQMVFEAMLTMMRHNVHHL 258
Query: 76 PVVENGEVIALLDIAKCL 93
PV+ G+ I ++ + L
Sbjct: 259 PVLRQGQPIGVISQSDIL 276
Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRG----------ILTSKDILMRVISQ 202
K+VTI + TV A M +SS +V P G +LT +D+ RVI++
Sbjct: 159 KLVTIETSGTVREAAITMSTEGVSSLLVMNAGVPEGAMGNAARMAGMLTDRDLRTRVIAK 218
Query: 203 NLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
L D T V ++MTP + +A+ M HLPV+ R G + V+
Sbjct: 219 GLSVD-TPVSEIMTPELIYGEHHQMVFEAMLTMMRHNVHHLPVL-RQGQPIGVI 270
>gi|335039572|ref|ZP_08532730.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Caldalkalibacillus thermarum
TA2.A1]
gi|334180532|gb|EGL83139.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Caldalkalibacillus thermarum
TA2.A1]
Length = 646
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +V ++++ D + GI+T D+ R +A E ++ + V M+ NP + SD+
Sbjct: 201 MMNHQVSSVVVMDKGRM-AGIITKSDL-VRQMAAEHQVQGSTVGLWMSPNPLTITSDSYY 258
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIA-------KCLYDAIARMERA 103
+AL + +HLPV +NG VI +L +A + L+D+I +E+A
Sbjct: 259 YQALAIFLTENIKHLPVTKNGRVIGMLTLADLMRKKNRGLFDSIQAIEKA 308
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
S V+ + TDT+ A ++M+ ++SS VV + + GI+T D++ ++ +++ ST V
Sbjct: 183 SPVIAVEVTDTIAHAARQMMNHQVSSVVVMDKGRMAGIITKSDLVRQMAAEHQVQGST-V 241
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
M+PNP T D+ AL I HLPV ++G V+ ++
Sbjct: 242 GLWMSPNPLTITSDSYYYQALAIFLTENIKHLPVT-KNGRVIGML 285
>gi|333891554|ref|YP_004465429.1| Signaling protein [Alteromonas sp. SN2]
gi|332991572|gb|AEF01627.1| Signaling protein [Alteromonas sp. SN2]
Length = 609
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M RV +LL+T++ L+ GI+TD+D+ +RV+A + L PVS VMT +P V S+
Sbjct: 172 MTDNRVSSLLITEAGQLV-GIVTDRDLRSRVVAAGVALT-NPVSSVMTSSPANVASNLTL 229
Query: 61 VEALQKMVQGKFRHLPVVE 79
+A+ M + HLP+++
Sbjct: 230 FDAMALMTEKNIHHLPILD 248
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 166 ATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATID 225
A + M + R+SS ++T + GI+T +D+ RV++ + A + V VMT +P +
Sbjct: 168 AAQLMTDNRVSSLLITEAGQLVGIVTDRDLRSRVVAAGV-ALTNPVSSVMTSSPANVASN 226
Query: 226 TPIVDALHIMHDGKFLHLPVVDRD 249
+ DA+ +M + HLP++D+D
Sbjct: 227 LTLFDAMALMTEKNIHHLPILDKD 250
>gi|86137280|ref|ZP_01055857.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Roseobacter sp. MED193]
gi|85825615|gb|EAQ45813.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Roseobacter sp. MED193]
Length = 607
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 66/115 (57%), Gaps = 7/115 (6%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + + ++D + LL GILT +D+ +++A L + TPVS+VMT++P + +
Sbjct: 168 MRQHHISCVCISDGDELL-GILTTRDLTEKLLAEGLPIS-TPVSQVMTKDPRSLPPSAIG 225
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL---DIAKCLYDAIARMERAAEKGKAIAA 112
+ L M++ H+PVV+N +++ ++ D+ + + A++ E + +A++A
Sbjct: 226 SDVLHAMMEHHIGHIPVVQNQQLVGIITQTDLTR--FQAVSSAELVSSIARAMSA 278
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 65/124 (52%), Gaps = 3/124 (2%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKV 214
VT SP T A + M + +S ++ ++ GILT++D+ +++++ LP ST V +V
Sbjct: 153 VTCSPGLTCQGAAQLMRQHHISCVCISDGDELLGILTTRDLTEKLLAEGLPI-STPVSQV 211
Query: 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITH-AAVATEILLD 273
MT +P D LH M + H+PVV ++ +V ++ +T AV++ L+
Sbjct: 212 MTKDPRSLPPSAIGSDVLHAMMEHHIGHIPVV-QNQQLVGIITQTDLTRFQAVSSAELVS 270
Query: 274 QIMR 277
I R
Sbjct: 271 SIAR 274
>gi|145590453|ref|YP_001152455.1| signal-transduction protein [Pyrobaculum arsenaticum DSM 13514]
gi|145282221|gb|ABP49803.1| putative signal-transduction protein with CBS domains [Pyrobaculum
arsenaticum DSM 13514]
Length = 128
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M A V ++++ D GI+T++DI R++A E++ + TP+ +V +N D
Sbjct: 28 MYASNVGSVVVVDRTGSPVGIITERDI-VRLLAEEVDFK-TPLERVARKNLVTASPDDTV 85
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCL 93
+ KM++ RH+PVVE G VI ++ I L
Sbjct: 86 IATAAKMIEKNIRHIPVVEGGRVIGVVSIRDVL 118
>gi|73539746|ref|YP_294266.1| hypothetical protein Reut_A0040 [Ralstonia eutropha JMP134]
gi|72117159|gb|AAZ59422.1| CBS [Ralstonia eutropha JMP134]
Length = 146
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + + A+L+ + ++ GIL+++D A +VI + + +T V +MT + +V D
Sbjct: 32 MAEKGIGAVLVMEHGKIV-GILSERDYARKVILMQRSSRDTLVRDIMTSSVIYVSGDQST 90
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEK 106
E + M + + RHLPV+ ++I +L I + D I+ + E+
Sbjct: 91 DECMALMTKHRMRHLPVMNGEDLIGMLSIGDLVKDIISEQQFIIEQ 136
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
+ +I PT TV A + M E + + +V K GIL+ +D +VI + TLV
Sbjct: 16 IFSIPPTATVYAALQLMAEKGIGAVLVMEHGKIVGILSERDYARKVILMQRSSRDTLVRD 75
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
+MT + + D + + +M + HLPV++
Sbjct: 76 IMTSSVIYVSGDQSTDECMALMTKHRMRHLPVMN 109
>gi|302392250|ref|YP_003828070.1| hypothetical protein [Acetohalobium arabaticum DSM 5501]
gi|302204327|gb|ADL13005.1| CBS domain containing protein [Acetohalobium arabaticum DSM 5501]
Length = 141
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 20 GILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE 79
G++TD+DI R A+ ++ TP+ +VM+ +P + D EA Q M + + R LP+VE
Sbjct: 45 GVVTDRDIVLRNTAQGGDIN-TPIEQVMSDDPVYGTPDMSPQEAAQLMSEKQIRRLPIVE 103
Query: 80 NGEVIALLDIAKCLYDAIARMERAAEKGKAIA 111
N ++ ++ + ++ M E GKA++
Sbjct: 104 NDNIVGIISLGDLSTESRTDM----EAGKALS 131
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPAD-STL 210
S V TI TV A K M +L + V KP G++T +DI++R +Q D +T
Sbjct: 9 SDVSTIDTNSTVQDAAKIMNDLDVGIVPVCSGQKPVGVVTDRDIVLRNTAQG--GDINTP 66
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
+E+VM+ +P T D +A +M + + LP+V+ D
Sbjct: 67 IEQVMSDDPVYGTPDMSPQEAAQLMSEKQIRRLPIVEND 105
>gi|268317569|ref|YP_003291288.1| signal transduction protein [Rhodothermus marinus DSM 4252]
gi|262335103|gb|ACY48900.1| putative signal transduction protein with CBS domains [Rhodothermus
marinus DSM 4252]
Length = 144
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%)
Query: 6 VDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQ 65
+ A+ + D A + G+ T++D+ R+ + + E PV MT F D + +
Sbjct: 35 IGAMPVVDDRARMIGLFTERDVVWRLAEKGAAILEEPVRYCMTSPVHFCKPDDSIRDVMW 94
Query: 66 KMVQGKFRHLPVVENGEVIALLDIA 90
+M + RHLPVVE+G +I ++ I
Sbjct: 95 QMTYRRIRHLPVVEDGRLIGMISIG 119
>gi|374998260|ref|YP_004973759.1| hypothetical protein AZOLI_p10295 [Azospirillum lipoferum 4B]
gi|357425685|emb|CBS88581.1| conserved protein of unknown function, cystathionine beta synthase
domain [Azospirillum lipoferum 4B]
Length = 151
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 1 MAARRVDALLLTD----SNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNP-TFVL 55
M A + AL++ D L G+L+++DI ++ R L PVS++MTR P T
Sbjct: 30 MKAENISALVVKDVCRTEGNTLAGVLSERDIVHALLDRGAPLLSMPVSQLMTRQPVTCAP 89
Query: 56 SDTLAVEALQKMVQGKFRHLPVVENGEVIALL 87
SD++ +ALQ M + RHLPV+E+G ++ ++
Sbjct: 90 SDSVR-QALQLMDRHHIRHLPVLEDGHLVGVV 120
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
Query: 150 EKSKVVTISPTDTVLMATKKMLELRLSSAVV-----TVENKPRGILTSKDILMRVISQNL 204
++S+VV + + TV A M +S+ VV T N G+L+ +DI+ ++ +
Sbjct: 10 KESRVVAVRTSATVAEAIGLMKAENISALVVKDVCRTEGNTLAGVLSERDIVHALLDRGA 69
Query: 205 PADSTLVEKVMTPNP-ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
P S V ++MT P CA D+ + AL +M HLPV++ DG +V VV
Sbjct: 70 PLLSMPVSQLMTRQPVTCAPSDS-VRQALQLMDRHHIRHLPVLE-DGHLVGVV 120
>gi|334337368|ref|YP_004542520.1| signal transduction protein with CBS domains [Isoptericola
variabilis 225]
gi|334107736|gb|AEG44626.1| putative signal transduction protein with CBS domains [Isoptericola
variabilis 225]
Length = 147
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 57/101 (56%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A + A++++D A + GI++++D+ R+ A + + + V ++MTR+ DT+
Sbjct: 30 LAEHGIGAVVVSDDGASVDGIVSERDVVRRLHAEGVGVLDAAVEQIMTRDVQTCDPDTML 89
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 101
+ + M + +FRH+PVV G + ++ I + +A ++
Sbjct: 90 DDLMHMMTEHRFRHVPVVHEGRLAGIVSIGDVVKRRLAEVQ 130
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Query: 145 STIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVISQN 203
T+ + VVT++ TV + E + + VV+ + GI++ +D++ R+ ++
Sbjct: 5 DTLRHKGDAVVTVARDRTVRDLLALLAEHGIGAVVVSDDGASVDGIVSERDVVRRLHAEG 64
Query: 204 LPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVV 246
+ VE++MT + + DT + D +H+M + +F H+PVV
Sbjct: 65 VGVLDAAVEQIMTRDVQTCDPDTMLDDLMHMMTEHRFRHVPVV 107
>gi|305663917|ref|YP_003860205.1| putative signal transduction protein with CBS domains [Ignisphaera
aggregans DSM 17230]
gi|304378486|gb|ADM28325.1| putative signal transduction protein with CBS domains [Ignisphaera
aggregans DSM 17230]
Length = 134
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + +L++TD N ++ G++T KDI RV+A+ L+++ T + +++++ T V DTL
Sbjct: 28 MERHNIASLIVTDENDVVLGVITAKDIVIRVLAKGLDIKTTKIIEIVSKPVTVVEPDTLL 87
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCL 93
+ + M+ H+PVV G+ I ++ I L
Sbjct: 88 KDVVNMMIGTGHGHIPVVNKAGKAIGIVTIDDIL 121
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 162 TVLMATKKMLELRLSSAVVTVENKP-RGILTSKDILMRVISQNLPADSTLVEKVMTPNPE 220
TV A K M ++S +VT EN G++T+KDI++RV+++ L +T + ++++
Sbjct: 20 TVYDAIKLMERHNIASLIVTDENDVVLGVITAKDIVIRVLAKGLDIKTTKIIEIVSKPVT 79
Query: 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
DT + D +++M H+PVV++ G + +V +
Sbjct: 80 VVEPDTLLKDVVNMMIGTGHGHIPVVNKAGKAIGIVTI 117
>gi|296271229|ref|YP_003653861.1| putative CBS domain-containing signal transduction protein
[Thermobispora bispora DSM 43833]
gi|296094016|gb|ADG89968.1| putative signal transduction protein with CBS domains
[Thermobispora bispora DSM 43833]
Length = 145
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 6 VDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQ 65
V AL + + L GI+TD+DI + A ++L+ T V + + +V + EALQ
Sbjct: 39 VGALPICGEDDRLKGIITDRDIVVKCCAEGVDLDRTTVGQCAQGSLIWVDAQCSVEEALQ 98
Query: 66 KMVQGKFRHLPVVENGEVIALL---DIAKCLYD 95
KM Q + + LPV+EN ++ ++ D+AK L D
Sbjct: 99 KMEQHQIKRLPVIENKRLVGMISEADLAKELPD 131
>gi|254459705|ref|ZP_05073121.1| CBS domain protein [Rhodobacterales bacterium HTCC2083]
gi|206676294|gb|EDZ40781.1| CBS domain protein [Rhodobacteraceae bacterium HTCC2083]
Length = 144
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 6/111 (5%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRN-PTFVLSDTL 59
+A +++ ++++ S GIL+++DI + A + V MT T LSDT
Sbjct: 31 LAKKQIGTVVVSSSGDTADGILSERDIVRELAAHGASCLAEKVDDYMTSKLVTCKLSDT- 89
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALL---DIAKCLYDAIARMERAAEKG 107
A L +M +G+FRH+PVVE+G++I L+ D+ K ++ ME+ A +G
Sbjct: 90 ADSVLHQMTKGRFRHMPVVEDGQLIGLITLGDVVKARLSELS-MEKDALQG 139
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVE-NKPRGILTSKDILMRVISQNLPADSTLVE 212
VVT+ P V A + + + ++ + VV+ + GIL+ +DI+ + + + V+
Sbjct: 15 VVTVKPGSLVRDAAQILAKKQIGTVVVSSSGDTADGILSERDIVRELAAHGASCLAEKVD 74
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
MT + LH M G+F H+PVV+ DG ++ ++
Sbjct: 75 DYMTSKLVTCKLSDTADSVLHQMTKGRFRHMPVVE-DGQLIGLI 117
>gi|392401700|ref|YP_006438312.1| putative signal transduction protein with CBS domains [Turneriella
parva DSM 21527]
gi|390609654|gb|AFM10806.1| putative signal transduction protein with CBS domains [Turneriella
parva DSM 21527]
Length = 143
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%)
Query: 8 ALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKM 67
LL+ + GI+T KD+ + R LE+ V +VM++N T V S+T +AL M
Sbjct: 37 GLLILTPAGDVVGIITQKDVLRLIAERYTQLEKVEVWEVMSKNLTTVPSETPLDQALGLM 96
Query: 68 VQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE 105
+ HLPVV +G+ + L+ + + + R E A+
Sbjct: 97 TENHIHHLPVVRDGKTVGLISLDDIISARLKRTESEAQ 134
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 157 ISPTDTVLMATKKMLELRLSSAVV-TVENKPRGILTSKDILMRVISQNLPADSTLVEKVM 215
+ +D+VL A + ML ++ + ++ T GI+T KD+L + + + V +VM
Sbjct: 17 VKQSDSVLAAVRHMLSIKETGLLILTPAGDVVGIITQKDVLRLIAERYTQLEKVEVWEVM 76
Query: 216 TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
+ N +TP+ AL +M + HLPVV RDG V ++ + I A
Sbjct: 77 SKNLTTVPSETPLDQALGLMTENHIHHLPVV-RDGKTVGLISLDDIISA 124
>gi|288960069|ref|YP_003450409.1| hypothetical protein AZL_a03340 [Azospirillum sp. B510]
gi|288912377|dbj|BAI73865.1| hypothetical protein AZL_a03340 [Azospirillum sp. B510]
Length = 151
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 1 MAARRVDALLLTD----SNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNP-TFVL 55
M A + AL++ D L G+L+++DI ++ R L PVS++MTR P T
Sbjct: 30 MKAENISALIVKDVCRTEGNTLAGVLSERDIVHALLERGAPLLAMPVSQLMTRQPVTCAP 89
Query: 56 SDTLAVEALQKMVQGKFRHLPVVENGEVIALL 87
SD++ EAL M + RHLPV+E+G ++ ++
Sbjct: 90 SDSVR-EALHLMDKHHIRHLPVLEDGHLVGVV 120
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 62/113 (54%), Gaps = 8/113 (7%)
Query: 150 EKSKVVTISPTDTVLMATKKMLELRLSSAVV-----TVENKPRGILTSKDILMRVISQNL 204
++++VV + + TV A + M +S+ +V T N G+L+ +DI+ ++ +
Sbjct: 10 KEARVVAVRTSATVADAIRLMKAENISALIVKDVCRTEGNTLAGVLSERDIVHALLERGA 69
Query: 205 PADSTLVEKVMTPNP-ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
P + V ++MT P CA D+ + +ALH+M HLPV++ DG +V VV
Sbjct: 70 PLLAMPVSQLMTRQPVTCAPSDS-VREALHLMDKHHIRHLPVLE-DGHLVGVV 120
>gi|240102779|ref|YP_002959088.1| hypothetical protein TGAM_0722 [Thermococcus gammatolerans EJ3]
gi|239910333|gb|ACS33224.1| Conserved hypothetical protein, containing 2 CBS-domains
[Thermococcus gammatolerans EJ3]
Length = 136
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 10/125 (8%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPR-GILTSKDILMRVISQNLPADSTLV 211
K++ I P DTV A + M E + S VV EN G LT DI+ R++ LP ++T V
Sbjct: 14 KLIGIRPDDTVKRAGEIMTEFDIGSLVVVDENGDVVGFLTKGDIIRRLVVPGLP-NTTPV 72
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA------- 264
++MT N +TP+ D L +M H+ +++ +G +V + + + A
Sbjct: 73 REIMTKNLVTVPAETPLQDVLDVMAKKGLKHI-LIEENGKIVGIFSITDLLEASRRKLET 131
Query: 265 AVATE 269
A+ATE
Sbjct: 132 AIATE 136
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 6 VDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQ 65
+ +L++ D N + G LT DI R++ L TPV ++MT+N V ++T + L
Sbjct: 36 IGSLVVVDENGDVVGFLTKGDIIRRLVVPGLP-NTTPVREIMTKNLVTVPAETPLQDVLD 94
Query: 66 KMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERA 103
M + +H+ + ENG+++ + I L + ++E A
Sbjct: 95 VMAKKGLKHILIEENGKIVGIFSITDLLEASRRKLETA 132
>gi|307596625|ref|YP_003902942.1| putative CBS domain-containing signal transduction protein
[Vulcanisaeta distributa DSM 14429]
gi|307551826|gb|ADN51891.1| putative signal transduction protein with CBS domains [Vulcanisaeta
distributa DSM 14429]
Length = 128
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M V ++L+ D + GI T++D+ R++A ++L+ TP+ KVM+R +
Sbjct: 27 MYMHNVGSVLVIDEDEKPVGIFTERDL-VRIVAEGISLD-TPLMKVMSRKLITANTSESV 84
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDI 89
+ A KM++ RHLPVVE G + ++ I
Sbjct: 85 ISAAMKMIENNIRHLPVVEEGRAVGMVSI 113
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 4/121 (3%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVEN-KPRGILTSKDILMRVISQNLPADST 209
+ V++ TD + A KM + S +V E+ KP GI T +D L+R++++ + D+
Sbjct: 8 RDGVISCRSTDPITCAVAKMYMHNVGSVLVIDEDEKPVGIFTERD-LVRIVAEGISLDTP 66
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269
L+ KVM+ A ++ A M + HLPVV+ +G V +V + + A +A E
Sbjct: 67 LM-KVMSRKLITANTSESVISAAMKMIENNIRHLPVVE-EGRAVGMVSIRDLVRALMAQE 124
Query: 270 I 270
+
Sbjct: 125 L 125
>gi|384439230|ref|YP_005653954.1| Cyclic nucleotide binding protein/2 cbs domains [Thermus sp.
CCB_US3_UF1]
gi|359290363|gb|AEV15880.1| Cyclic nucleotide binding protein/2 cbs domains [Thermus sp.
CCB_US3_UF1]
Length = 582
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 28/209 (13%)
Query: 70 GKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPN 129
G+F P + +GE AL +A+ E A + A A A + +G +
Sbjct: 69 GEFFGFPSLLSGEPPALSVVARTPVRLCVFPEEAFRRLMAFAEAA----RFFGQGL---- 120
Query: 130 TFIETLRERMFRPSLSTIIPEKSKV----VTISPTDTVLMATKKMLELRLSSAVVTVENK 185
+E +R R P +S P V V + P+ TV A + M + +SS + V+ +
Sbjct: 121 --VERIRLRA-APDVSLFAPVGRLVRRPPVFVPPSATVAEAARLMRQEGISS--LLVQGE 175
Query: 186 PRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPV 245
P GILT +D+ RV++Q+LP +T V VM+ + TP+ +A+ M + HLP+
Sbjct: 176 PLGILTDRDLRNRVLAQDLP-PTTPVGAVMSAPLFALSATTPLYEAVAAMVERGIHHLPL 234
Query: 246 VDRDGDVVDVVDVIHITHAAVATEILLDQ 274
+ + VV VV TH T++LL Q
Sbjct: 235 TEGE-KVVGVV-----TH----TDLLLHQ 253
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 20 GILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAV-EALQKMVQGKFRHLPVV 78
GILTD+D+ RV+A++L TPV VM+ P F LS T + EA+ MV+ HLP+
Sbjct: 178 GILTDRDLRNRVLAQDLP-PTTPVGAVMS-APLFALSATTPLYEAVAAMVERGIHHLPLT 235
Query: 79 ENGEVIALL 87
E +V+ ++
Sbjct: 236 EGEKVVGVV 244
>gi|388544286|ref|ZP_10147574.1| hypothetical protein PMM47T1_07876 [Pseudomonas sp. M47T1]
gi|388277469|gb|EIK97043.1| hypothetical protein PMM47T1_07876 [Pseudomonas sp. M47T1]
Length = 146
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA + V AL + A++ GI++++D A +V+ + TPVS++M+ V
Sbjct: 34 MAEKNVGALPVIKDGAVV-GIVSERDYARKVVLLGRSSVGTPVSEIMSAKVITVDPHKNI 92
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 98
+ M G RHLPVVE G+++ LL I + +AIA
Sbjct: 93 DTCMNMMTDGHLRHLPVVEGGQLVGLLSIGDLVKEAIA 130
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVI-----SQNLPA 206
+V TI P V+ A + M E + + V + GI++ +D +V+ S P
Sbjct: 16 QQVHTIGPDQMVVEALRLMAEKNVGALPVIKDGAVVGIVSERDYARKVVLLGRSSVGTPV 75
Query: 207 DSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
+ KV+T +P IDT +++M DG HLPVV+ G +V ++ + + A+
Sbjct: 76 SEIMSAKVITVDPH-KNIDT----CMNMMTDGHLRHLPVVE-GGQLVGLLSIGDLVKEAI 129
Query: 267 ATE 269
A +
Sbjct: 130 AEQ 132
>gi|239947699|ref|ZP_04699452.1| arabinose 5-phosphate isomerase [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921975|gb|EER21999.1| arabinose 5-phosphate isomerase [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 319
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +R+ L+TD N L GI+TD D+ R I ++ L+ S +MT+NP + S+ A
Sbjct: 225 MNKKRLGCTLVTDKNQNLVGIITDGDL-RRHINDQIYLK--IASSIMTKNPIHISSEIFA 281
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCL 93
EAL M ++P+V+N +I ++ I L
Sbjct: 282 KEALNLMKAKNITNIPIVDNNVIIGIIHIHDLL 314
>gi|241116892|ref|XP_002401659.1| conserved hypothetical protein [Ixodes scapularis]
gi|215493203|gb|EEC02844.1| conserved hypothetical protein [Ixodes scapularis]
Length = 282
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +R+ L+TD N L GI+TD D+ R I ++ L+ S +MT+NP + S+ A
Sbjct: 188 MNKKRLGCTLVTDKNQNLVGIITDGDL-RRHINDQIYLK--IASSIMTKNPIHISSEIFA 244
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCL 93
EAL M ++P+V+N +I ++ I L
Sbjct: 245 KEALNLMKAKNITNIPIVDNNVIIGIIHIHDLL 277
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.133 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,960,434,727
Number of Sequences: 23463169
Number of extensions: 158786282
Number of successful extensions: 506155
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2455
Number of HSP's successfully gapped in prelim test: 4436
Number of HSP's that attempted gapping in prelim test: 491568
Number of HSP's gapped (non-prelim): 15470
length of query: 281
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 140
effective length of database: 9,050,888,538
effective search space: 1267124395320
effective search space used: 1267124395320
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)