BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023512
(281 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0DH79|Y5064_ARATH CBS domain-containing protein CBSCBSPB5 OS=Arabidopsis thaliana
GN=CBSCBSPB5 PE=2 SV=1
Length = 548
Score = 449 bits (1155), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/268 (81%), Positives = 246/268 (91%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDALLLTDSNALLCGILTD+DIAT+VIA++LNLEETPVSKVMT+NP FVLSDT+A
Sbjct: 87 MAARRVDALLLTDSNALLCGILTDRDIATKVIAKQLNLEETPVSKVMTKNPVFVLSDTIA 146
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMER+ EKGKAIAAAVEGVEK+
Sbjct: 147 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERSVEKGKAIAAAVEGVEKN 206
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WGTSI+GPNTF+ETLRER+F+PSLSTIIPE +KV+ + +TVL T KM+E + S+A+V
Sbjct: 207 WGTSIAGPNTFMETLRERIFKPSLSTIIPENTKVLKVGLDETVLGVTMKMVEYQSSAAMV 266
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
VENK GILTSKDILMRVISQNLP ++T VEKVMTPNPE AT+D IV+ALHIMH+GKF
Sbjct: 267 MVENKLVGILTSKDILMRVISQNLPQETTTVEKVMTPNPESATVDMAIVEALHIMHNGKF 326
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVAT 268
LHLPV+D+DGDVV V+DVIHITHAAV T
Sbjct: 327 LHLPVLDKDGDVVAVIDVIHITHAAVTT 354
>sp|Q0WLC7|Y5053_ARATH CBS domain-containing protein CBSCBSPB4 OS=Arabidopsis thaliana
GN=CBSCBSPB4 PE=2 SV=2
Length = 548
Score = 449 bits (1155), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/268 (81%), Positives = 246/268 (91%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDALLLTDSNALLCGILTD+DIAT+VIA++LNLEETPVSKVMT+NP FVLSDT+A
Sbjct: 87 MAARRVDALLLTDSNALLCGILTDRDIATKVIAKQLNLEETPVSKVMTKNPVFVLSDTIA 146
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMER+ EKGKAIAAAVEGVEK+
Sbjct: 147 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERSVEKGKAIAAAVEGVEKN 206
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WGTSI+GPNTF+ETLRER+F+PSLSTIIPE +KV+ + +TVL T KM+E + S+A+V
Sbjct: 207 WGTSIAGPNTFMETLRERIFKPSLSTIIPENTKVLKVGLDETVLGVTMKMVEYQSSAAMV 266
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
VENK GILTSKDILMRVISQNLP ++T VEKVMTPNPE AT+D IV+ALHIMH+GKF
Sbjct: 267 MVENKLVGILTSKDILMRVISQNLPQETTTVEKVMTPNPESATVDMAIVEALHIMHNGKF 326
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVAT 268
LHLPV+D+DGDVV V+DVIHITHAAV T
Sbjct: 327 LHLPVLDKDGDVVAVIDVIHITHAAVTT 354
>sp|Q9FMV3|Y5349_ARATH CBS domain-containing protein CBSCBSPB1 OS=Arabidopsis thaliana
GN=CBSCBSPB1 PE=1 SV=1
Length = 543
Score = 418 bits (1075), Expect = e-116, Method: Compositional matrix adjust.
Identities = 201/251 (80%), Positives = 226/251 (90%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA+RRVDALLLTDSN +LCGILTDKDIATRVI++ELN+EETPVSKVMT+NP FVLS+TLA
Sbjct: 79 MASRRVDALLLTDSNEMLCGILTDKDIATRVISQELNVEETPVSKVMTKNPMFVLSETLA 138
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK
Sbjct: 139 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKS 198
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WGT+ S PNTFIETLR+RMFRPSLSTIIP+ +KV+ +SPTDTVL KKM+E + S AVV
Sbjct: 199 WGTNTSVPNTFIETLRDRMFRPSLSTIIPDDTKVLKVSPTDTVLTVAKKMVEFQSSCAVV 258
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
+E+K RGI TSKDILMRV+++NLP TLVE VMT NPE +DTPIV+ALHIMH+GKF
Sbjct: 259 IIEDKLRGIFTSKDILMRVVAENLPPSETLVETVMTQNPESTIVDTPIVEALHIMHEGKF 318
Query: 241 LHLPVVDRDGD 251
LHLPV D++GD
Sbjct: 319 LHLPVTDKEGD 329
>sp|Q9LF97|Y3295_ARATH CBS domain-containing protein CBSCBSPB3 OS=Arabidopsis thaliana
GN=CBSCBSPB3 PE=1 SV=1
Length = 556
Score = 394 bits (1012), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/267 (70%), Positives = 226/267 (84%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA LLTDS+ALL GI+TDKD+ATRVIA L ++T VSKVMTRNP FV SD+LA
Sbjct: 88 MAARRVDACLLTDSSALLSGIVTDKDVATRVIAEGLRPDQTLVSKVMTRNPIFVTSDSLA 147
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVVENGEVIALLDI KCLYDAI+RME+AAE+G A+AAAVEGVEK
Sbjct: 148 LEALQKMVQGKFRHLPVVENGEVIALLDITKCLYDAISRMEKAAEQGSALAAAVEGVEKQ 207
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WG+ S P FIETLRERMF+P+LSTII + SKV ++P+D V +A K+M +LR++S ++
Sbjct: 208 WGSGYSAPYAFIETLRERMFKPALSTIITDNSKVALVAPSDPVSVAAKRMRDLRVNSVII 267
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
+ NK GILTSKDILMRV++QNL + TLVEKVMTPNPECA+++T I+DALH MHDGKF
Sbjct: 268 STGNKISGILTSKDILMRVVAQNLSPELTLVEKVMTPNPECASLETTILDALHTMHDGKF 327
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVA 267
LHLP++D+DG VDV+ ITHAA++
Sbjct: 328 LHLPIIDKDGSAAACVDVLQITHAAIS 354
>sp|Q9SJQ5|Y2650_ARATH CBS domain-containing protein CBSCBSPB2 OS=Arabidopsis thaliana
GN=CBSCBSPB2 PE=2 SV=1
Length = 536
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/268 (70%), Positives = 225/268 (83%), Gaps = 5/268 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTDS+ALL GI+TDKDIATRVIA L E T VSKVMTRNP FV SD+LA
Sbjct: 86 MAARRVDAVLLTDSSALLSGIVTDKDIATRVIAEGLRPEHTLVSKVMTRNPIFVTSDSLA 145
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVVENGEVIALLDI KCLYDAI+RME+AAE+G A+A AVE E+H
Sbjct: 146 IEALQKMVQGKFRHLPVVENGEVIALLDITKCLYDAISRMEKAAEQGSALATAVE--ERH 203
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WG SG FI+TLRERMF+P+LSTI+ E +KV +S +D V +A+KKM +LR++S ++
Sbjct: 204 WG---SGNFAFIDTLRERMFKPALSTIVTENTKVALVSASDPVFVASKKMRDLRVNSVII 260
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
V NK GILTSKDILMRV++QNL + TLVEKVMTPNPECA+I+T I+DALHIMHDGKF
Sbjct: 261 AVGNKIHGILTSKDILMRVVAQNLSPELTLVEKVMTPNPECASIETTILDALHIMHDGKF 320
Query: 241 LHLPVVDRDGDVVDVVDVIHITHAAVAT 268
LHLPV D+DG V +DV+ ITHAA++T
Sbjct: 321 LHLPVFDKDGFAVACLDVLQITHAAIST 348
>sp|O13965|MUG70_SCHPO Meiotically up-regulated gene 70 protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mug70 PE=1 SV=1
Length = 730
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 154/289 (53%), Gaps = 25/289 (8%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R + +L+ D + L GI+T DIATR + LN +T ++ +M+ +P + SDT
Sbjct: 89 MAAKRQNCVLVVDDDEQLAGIVTATDIATRCVGAGLNARQTLIADIMSTSPLCITSDTRF 148
Query: 61 VEALQKMVQGKFRHLPVVENG----------EVIALLDIAKCLYDAIARMERAAEKGKAI 110
+AL M++ KFRHLPVV +G +VI ++++ CL + + R+ R E + +
Sbjct: 149 DDALLLMIEHKFRHLPVVSDGGPDGSAGDEGDVIGIINMRACLREPLNRIARQQEAAQKL 208
Query: 111 AAAVEGVEKHW----------GTSISGPNT-----FIETLRERMFRPSLSTIIPEKSKVV 155
A+EG ++ +S+SG + ++E+L+++ + ++I +
Sbjct: 209 VEALEGAQEEIENKSVSGNTNSSSVSGNHAAEFLEYVESLKKKASGLEIMSLIDSSEEPF 268
Query: 156 TISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVM 215
+ TV AT+ M +S+ +V G+ T+ D+++RV++ L + V +VM
Sbjct: 269 LVGTRTTVAEATESMARSGVSAVLVMDNGAVSGVFTAHDVVLRVLAAGLDPYRSSVIRVM 328
Query: 216 TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264
TP+P+CA + AL M +GKF +LPVVD ++ ++ + H+ A
Sbjct: 329 TPHPDCALASLRVSTALERMIEGKFSNLPVVDESDAIIGMLSLFHLATA 377
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Query: 162 TVLMATKKMLELRLSSAVVTVENKPR--GILTSKDILMRVISQNLPADSTLVEKVMTPNP 219
+++ T +++ + + V+ V++ + GI+T+ DI R + L A TL+ +M+ +P
Sbjct: 80 SLVTETAQLMAAKRQNCVLVVDDDEQLAGIVTATDIATRCVGAGLNARQTLIADIMSTSP 139
Query: 220 ECATIDTPIVDALHIMHDGKFLHLPVVDR---DGDVVDVVDVIHITHAAVATEILLDQIM 276
C T DT DAL +M + KF HLPVV DG D DVI I + L++I
Sbjct: 140 LCITSDTRFDDALLLMIEHKFRHLPVVSDGGPDGSAGDEGDVIGIINMRACLREPLNRIA 199
Query: 277 RQQ 279
RQQ
Sbjct: 200 RQQ 202
>sp|P32987|YBP3_ACIAM Uncharacterized 17.7 kDa protein in bps2 3'region OS=Acidianus
ambivalens PE=4 SV=1
Length = 164
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVT-VENKPRGILTSKDILMRVISQNLPADSTL 210
+KV + P T+ A K+M E L S VV +N+ GI+T +DI+ + N DS
Sbjct: 11 TKVYVVKPNVTIAEAAKEMKEHNLGSLVVIDSQNRVVGIITERDIVKA--ASNRDIDSP- 67
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258
VEK MT + + T DT + DAL IM + F HLP++ +G + +V +
Sbjct: 68 VEKYMTKDVKGVTEDTEVTDALDIMLNNGFRHLPIIKSNGKLYGIVSI 115
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + +L++ DS + GI+T++DI R++ ++PV K MT++ V DT
Sbjct: 29 MKEHNLGSLVVIDSQNRVVGIITERDIVKAASNRDI---DSPVEKYMTKDVKGVTEDTEV 85
Query: 61 VEALQKMVQGKFRHLPVVE-NGE---VIALLDIAKCLYDA-IARMERAAE--KGKAIAAA 113
+AL M+ FRHLP+++ NG+ ++++ D+A+ L D + + AE KG +
Sbjct: 86 TDALDIMLNNGFRHLPIIKSNGKLYGIVSIRDLARALLDVHTMQFGKPAEEVKGTGVICP 145
Query: 114 VEGVE-KHWGTSISGPNT 130
V G+E +G G +
Sbjct: 146 VCGMEIDEYGYCGCGTGS 163
>sp|P50100|Y525_METKA Uncharacterized protein MK0525 OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=MK0525 PE=4
SV=2
Length = 196
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVE-NKPRGILTSKDILMRVISQNLPADST 209
+ V+T SPT+T + KM E + S V+ E ++P GI+T +D++++V+SQ D
Sbjct: 11 RRDVITGSPTETAVEIAYKMREHGIGSVVIVNEKDEPIGIITERDLVIKVVSQGKNPDEV 70
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV---DVIHITHAAV 266
+ +M+ D + +A+ +M D LP+VD +G ++ +V D++ + V
Sbjct: 71 IARDIMSQPVITVEEDMEVNEAVKLMVDKGIRRLPIVDDNGKLIGIVTMQDILQVEPYLV 130
Query: 267 AT 268
AT
Sbjct: 131 AT 132
>sp|Q58069|Y653_METJA Uncharacterized protein MJ0653 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0653 PE=4 SV=1
Length = 194
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 170 MLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIV 229
M E + + V+ NKP GI+T +DI+ RV+S+NL L E+VM+ + I
Sbjct: 33 MTENNIGAVVIVENNKPIGIVTERDIVKRVVSKNLKPKDVLAEEVMSKKIITIPQNASIT 92
Query: 230 DALHIMHDGKFLHLPVVDRDGDVVDVV---DVIHIT 262
+A IM LPVV +DG++V +V D++ ++
Sbjct: 93 EAAKIMATHGIKRLPVV-KDGELVGIVTQSDIVRVS 127
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + A+++ ++N + GI+T++DI RV+++ L ++ +VM++ + +
Sbjct: 33 MTENNIGAVVIVENNKPI-GIVTERDIVKRVVSKNLKPKDVLAEEVMSKKIITIPQNASI 91
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
EA + M + LPVV++GE++ ++
Sbjct: 92 TEAAKIMATHGIKRLPVVKDGELVGIV 118
>sp|Q9LEV3|CBSX3_ARATH CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis
thaliana GN=CBSX3 PE=1 SV=1
Length = 206
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 161 DTVLMATKKMLELRLSSAVVTVENKPR---GILTSKDILMRVISQNLPADSTLVEKVMTP 217
DTV A K M + + + VV + + GI+T +D L ++I Q + ST V +MT
Sbjct: 79 DTVYDAVKSMTQHNVGALVVVKPGEQQALAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 138
Query: 218 NPECATI--DTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
+ T+ +T ++ A+ +M D + H+PV+ +D ++ +V + + A V
Sbjct: 139 ENKLITVTPETKVLRAMQLMTDNRIRHIPVI-KDKGMIGMVSIGDVVRAVV 188
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 1 MAARRVDALLLT--DSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTF--VLS 56
M V AL++ L GI+T++D ++I + + + T V +MT V
Sbjct: 88 MTQHNVGALVVVKPGEQQALAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVTP 147
Query: 57 DTLAVEALQKMVQGKFRHLPVVENGEVIALLDIA 90
+T + A+Q M + RH+PV+++ +I ++ I
Sbjct: 148 ETKVLRAMQLMTDNRIRHIPVIKDKGMIGMVSIG 181
>sp|Q5NGP7|KDSD_FRATT Arabinose 5-phosphate isomerase KdsD OS=Francisella tularensis
subsp. tularensis (strain SCHU S4 / Schu 4) GN=kdsD PE=1
SV=1
Length = 327
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 4 RRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEA 63
+ V L+ ++N LL GI TD D+ A N + +S+VMT+NP + + +A+ A
Sbjct: 234 KGVGNTLVAENNTLL-GIFTDGDLRRMFEAESFN-SQRAISEVMTKNPKSISKEEMAITA 291
Query: 64 LQKMVQGKFRHLPVVENGEVI 84
L+KM + + L VV+NG I
Sbjct: 292 LEKMEKYEITSLAVVDNGHNI 312
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 146 TIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLP 205
I+ + +++ + PTD + A ++ + + + +V N GI T D L R+
Sbjct: 207 NIMRKGNEIPIVKPTDNIRKAILEISDKGVGNTLVAENNTLLGIFTDGD-LRRMFEAESF 265
Query: 206 ADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
+ +VMT NP+ + + + AL M + L VVD +++ +V
Sbjct: 266 NSQRAISEVMTKNPKSISKEEMAITALEKMEKYEITSLAVVDNGHNILGIV 316
>sp|P54606|YHCV_BACSU CBS domain-containing protein YhcV OS=Bacillus subtilis (strain
168) GN=yhcV PE=4 SV=1
Length = 140
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 14/83 (16%)
Query: 16 ALLCGILTDKDIATRVIARELNLEETPVSKVMTR-----NPTFVLSDTLAVEALQKMVQG 70
+L G+LTD+DIA R A+ + +TPVS+VM+ NP L D A Q M Q
Sbjct: 42 GVLKGMLTDRDIALRTTAQGRD-GQTPVSEVMSTELVSGNPNMSLED-----ASQLMAQH 95
Query: 71 KFRHLPVVENGE---VIALLDIA 90
+ R LP+V+ ++AL D+A
Sbjct: 96 QIRRLPIVDQNNLVGIVALGDLA 118
Score = 38.5 bits (88), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
++V T+SP T+ A M + + + V + +G+LT +DI +R +Q T V
Sbjct: 10 TQVATVSPNQTIQEAASLMKQHNVGAIPVVEQGVLKGMLTDRDIALRTTAQGRDGQ-TPV 68
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
+VM+ + + DA +M + LP+VD++
Sbjct: 69 SEVMSTELVSGNPNMSLEDASQLMAQHQIRRLPIVDQN 106
>sp|O67500|Y1546_AQUAE Uncharacterized phosphosugar isomerase aq_1546 OS=Aquifex aeolicus
(strain VF5) GN=aq_1546 PE=3 SV=1
Length = 322
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M A+ A + + L GI+TD D+ R + R + E T VMT+NP + D LA
Sbjct: 225 MTAKGFGATAVVNEEGKLVGIITDGDL-RRFVNRGGSFENTRAKDVMTKNPKTIKPDELA 283
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCL 93
++AL+KM L VV E E I +L + L
Sbjct: 284 LKALRKMEDHNITVLIVVNEENEPIGILHMHDIL 317
Score = 35.4 bits (80), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 176 SSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIM 235
++AVV E K GI+T D L R +++ ++T + VMT NP+ D + AL M
Sbjct: 232 ATAVVNEEGKLVGIITDGD-LRRFVNRGGSFENTRAKDVMTKNPKTIKPDELALKALRKM 290
Query: 236 HDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267
D L VV+ + + + ++ + I A ++
Sbjct: 291 EDHNITVLIVVNEENEPIGILHMHDILKAELS 322
>sp|B1L5U5|IMDH_KORCO Inosine-5'-monophosphate dehydrogenase OS=Korarchaeum cryptofilum
(strain OPF8) GN=guaB PE=3 SV=1
Length = 476
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
V+T+SP D+V A + M E +S V V K GI+T +D+ ++N S LV+
Sbjct: 97 VITVSPEDSVEEARRLMREHGISGLPVIVGRKLVGIVTRRDVYF---AEN---GSLLVKD 150
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
+MT +P + +A IM K LPVV G+++ +V
Sbjct: 151 IMTKDPITVGPEITPQEARKIMARYKIEKLPVVSESGELIGLV 193
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPV 77
L GI+T +D+ A +L V +MT++P V + EA + M + K LPV
Sbjct: 129 LVGIVTRRDV---YFAENGSLL---VKDIMTKDPITVGPEITPQEARKIMARYKIEKLPV 182
Query: 78 V-ENGEVIALLDIAKCLY 94
V E+GE+I L+ Y
Sbjct: 183 VSESGELIGLVTAKDVFY 200
>sp|Q9ZD42|Y505_RICPR Uncharacterized protein RP505 OS=Rickettsia prowazekii (strain
Madrid E) GN=RP505 PE=3 SV=1
Length = 319
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +R+ L+TD L GI+TD D+ R I +++L+ S +MT+NP ++ S+ A
Sbjct: 225 MNKKRLGCTLVTDKEQNLIGIITDGDLR-RNIHDQIHLK--TASSIMTKNPHYISSEIFA 281
Query: 61 VEALQKMVQGKFRHLP 76
EAL M ++P
Sbjct: 282 QEALNLMKAKNITNIP 297
>sp|Q9UY49|IMDH_PYRAB Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus abyssi (strain
GE5 / Orsay) GN=guaB PE=3 SV=1
Length = 485
Score = 40.8 bits (94), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
V+TISP +TV A M + + V K GI++ KDI R + LV++
Sbjct: 103 VITISPEETVDFALFLMEKHDIDGLPVVENEKVVGIISKKDIAAR--------EGKLVKE 154
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
+MT + + + +AL IM + + LPVVD++G ++ ++
Sbjct: 155 LMTKDVITVPENIEVEEALKIMIENRIDRLPVVDKEGRLIGLI 197
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 14/100 (14%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +D L + + N + GI++ KDIA ARE L V ++MT++ V +
Sbjct: 119 MEKHDIDGLPVVE-NEKVVGIISKKDIA----AREGKL----VKELMTKDVITVPENIEV 169
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIAR 99
EAL+ M++ + LPVV+ G +I L+ + D +AR
Sbjct: 170 EEALKIMIENRIDRLPVVDKEGRLIGLI----TMSDLVAR 205
>sp|Q9KHT9|OPUCA_LISMN Carnitine transport ATP-binding protein OpuCA OS=Listeria
monocytogenes GN=opuCA PE=1 SV=1
Length = 397
Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 13/111 (11%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLE-ETPVSKVMTRNPTFVLSDTL 59
M +RVD LL+ D +L G + + I +LN T V ++ +N +V DTL
Sbjct: 275 MKEKRVDTLLVVDEGNVLKGFIDVEQI-------DLNRRTATSVMDIIEKNVFYVYEDTL 327
Query: 60 AVEALQKMVQGKFRHLPVVENGE----VIALLDIAKCLYDAI-ARMERAAE 105
+ +Q++++ ++++PVV+ + ++ + +YD+I +E A E
Sbjct: 328 LRDTVQRILKRGYKYIPVVDKDKRLVGIVTRASLVDIVYDSIWGTLEDATE 378
>sp|G2JZ44|OPUCA_LISM4 Carnitine transport ATP-binding protein OpuCA OS=Listeria
monocytogenes serotype 1/2a (strain 10403S) GN=opuCA
PE=1 SV=1
Length = 397
Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 13/111 (11%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLE-ETPVSKVMTRNPTFVLSDTL 59
M +RVD LL+ D +L G + + I +LN T V ++ +N +V DTL
Sbjct: 275 MKEKRVDTLLVVDEGNVLKGFIDVEQI-------DLNRRTATSVMDIIEKNVFYVYEDTL 327
Query: 60 AVEALQKMVQGKFRHLPVVENGE----VIALLDIAKCLYDAI-ARMERAAE 105
+ +Q++++ ++++PVV+ + ++ + +YD+I +E A E
Sbjct: 328 LRDTVQRILKRGYKYIPVVDKDKRLVGIVTRASLVDIVYDSIWGTLEDATE 378
>sp|Q57837|Y392_METJA Zinc metalloprotease MJ0392 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0392 PE=1 SV=1
Length = 339
Score = 39.3 bits (90), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 29 TRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLD 88
+RV+ E + +MT NP +V D E L M++ K+ PVVENG+++ +
Sbjct: 208 SRVVEVETIFKNIKAKDIMTPNPVYVTPDMSIEEFLDFMLKHKYFGYPVVENGKLVGCIG 267
Query: 89 IA 90
I
Sbjct: 268 IG 269
>sp|O58045|IMDH_PYRHO Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=guaB PE=1 SV=1
Length = 486
Score = 39.3 bits (90), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 16/107 (14%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
V+TI+P +TV A M + + V + K GI+T KDI R + LV++
Sbjct: 103 VITIAPDETVDFALFLMEKHGIDGLPVVEDEKVVGIITKKDIAAR--------EGKLVKE 154
Query: 214 VMTPN----PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
+MT PE ++ +AL IM + + LPVVD G +V ++
Sbjct: 155 LMTKEVITVPESIEVE----EALKIMIENRIDRLPVVDERGKLVGLI 197
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 14/100 (14%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +D L + + ++ GI+T KDIA ARE L V ++MT+ V
Sbjct: 119 MEKHGIDGLPVVEDEKVV-GIITKKDIA----AREGKL----VKELMTKEVITVPESIEV 169
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIAR 99
EAL+ M++ + LPVV E G+++ L+ + D +AR
Sbjct: 170 EEALKIMIENRIDRLPVVDERGKLVGLI----TMSDLVAR 205
>sp|P42851|IMDH_PYRFU Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=guaB
PE=3 SV=1
Length = 485
Score = 38.9 bits (89), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 16/107 (14%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
V+TI+P +T+ A M + + V E++ GI+T KDI R + V++
Sbjct: 103 VITIAPDETIDYALFLMEKHGIDGLPVVEEDRVVGIITKKDIAAR--------EGRTVKE 154
Query: 214 VMTPN----PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
+MT PE ++ +AL IM + + LPVV+ DG +V ++
Sbjct: 155 LMTREVITVPESVDVE----EALKIMMENRIDRLPVVNEDGKLVGLI 197
Score = 36.6 bits (83), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +D L + + + ++ GI+T KDIA R E V ++MTR V
Sbjct: 119 MEKHGIDGLPVVEEDRVV-GIITKKDIAAR--------EGRTVKELMTREVITVPESVDV 169
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERA----AEKGKAIAAA 113
EAL+ M++ + LPVV E+G+++ L+ + D +AR + EKG+ + AA
Sbjct: 170 EEALKIMMENRIDRLPVVNEDGKLVGLI----TMSDLVARKKYKNAVRNEKGELLVAA 223
>sp|O23193|CBSX1_ARATH CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis
thaliana GN=CBSX1 PE=1 SV=2
Length = 236
Score = 38.9 bits (89), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 207 DSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266
+ LV +MTP P T + DA I+ + K+ LPVVD DG +V ++ ++ AA+
Sbjct: 167 NGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAAL 226
>sp|P42502|KPSF1_ECOLX Arabinose 5-phosphate isomerase KpsF OS=Escherichia coli GN=kpsF
PE=3 SV=1
Length = 317
Score = 38.5 bits (88), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 9 LLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMV 68
+++ D+ L GI+TD D+ R + +E +L +++MTR P + DT+ +EA +KM
Sbjct: 245 VMVEDAEGGLAGIITDGDL-RRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQ 303
Query: 69 QGK 71
+ K
Sbjct: 304 KDK 306
>sp|Q8FDQ2|KPSF_ECOL6 Arabinose 5-phosphate isomerase KpsF OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=kpsF PE=1 SV=2
Length = 327
Score = 38.1 bits (87), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 9 LLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKM 67
+++ D+ L GI+TD D+ R + +E +L +++MTR P + DT+ +EA +KM
Sbjct: 245 VMVEDAEGGLAGIITDGDL-RRFMEKEGSLTSATAAQMMTREPLTLPEDTMIIEAEEKM 302
>sp|Q47334|KPSF5_ECOLX Arabinose 5-phosphate isomerase KpsF OS=Escherichia coli GN=kpsF
PE=3 SV=1
Length = 327
Score = 37.7 bits (86), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 9 LLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKM 67
+++ D+ L GI+TD D+ R + +E +L +++MTR P + DT+ +EA +KM
Sbjct: 245 VMVEDAEGGLAGIITDGDL-RRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKM 302
>sp|Q57647|Y188_METJA Uncharacterized protein MJ0188 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0188 PE=4 SV=1
Length = 265
Score = 37.7 bits (86), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
KVVT+S +TV K + E +S V K GI++ DI+ + D+ VE
Sbjct: 12 KVVTVSKDNTVKDVIKLLKETGHNSFPVVENGKLIGIVSVHDIVGK-------DDNEKVE 64
Query: 213 KVMTPNPE--CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
VMT + T D I+D IM F LPVVD + ++V ++
Sbjct: 65 NVMTKRKDMVVTTPDANIMDVGRIMFRTGFSKLPVVDEENNLVGII 110
>sp|P38697|IMDH2_YEAST Inosine-5'-monophosphate dehydrogenase 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IMD2 PE=1
SV=1
Length = 523
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPR----GILTSKDILMRVISQNLPADSTL 210
+ ISPT TV A + + VT + K G++TS+DI Q + +S L
Sbjct: 126 IVISPTTTVGEAKSMKEKYGFAGFPVTTDGKRNAKLVGVITSRDI------QFVEDNSLL 179
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
V+ VMT NP + + I+ K L VVD G++V ++
Sbjct: 180 VQDVMTKNPVTGAQGITLSEGNEILKKIKKGRLLVVDEKGNLVSML 225
>sp|Q58332|Y922_METJA Uncharacterized protein MJ0922 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0922 PE=1 SV=1
Length = 138
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ++ +L + D + GI+T DI +I + LE T + VMT++ + D
Sbjct: 34 MLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRDKYTLE-TTIGDVMTKDVITIHEDASI 92
Query: 61 VEALQKM-VQGK----FRHLPVVE-NGEVIALL 87
+EA++KM + GK LPVV+ N +++ ++
Sbjct: 93 LEAIKKMDISGKKEEIINQLPVVDKNNKLVGII 125
Score = 36.6 bits (83), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 7/109 (6%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSA-VVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
V+T + V+ A +KML+ ++SS V+ ENK GI+T+ DI +I ++T+ +
Sbjct: 18 VITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRDKYTLETTIGD 77
Query: 213 KVMTPNPECATIDTPIVDALHIMH-DGK----FLHLPVVDRDGDVVDVV 256
VMT + D I++A+ M GK LPVVD++ +V ++
Sbjct: 78 -VMTKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGII 125
>sp|Q9C5D0|CBSX2_ARATH CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis
thaliana GN=CBSX2 PE=1 SV=1
Length = 238
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 196 LMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDV 255
L ++IS+ +V +MTP+P T + DA ++ + KF LPVVD DG ++ +
Sbjct: 161 LQKLISKTY---GKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGI 217
Query: 256 VDVIHITHAAV 266
+ ++ AA+
Sbjct: 218 LTRGNVVRAAL 228
>sp|O34682|YLBB_BACSU Uncharacterized protein YlbB OS=Bacillus subtilis (strain 168)
GN=ylbB PE=4 SV=2
Length = 148
Score = 36.6 bits (83), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 18 LCGILTDKDIATRVIA-RELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLP 76
L GI+TD+D+ R IA ++ N ++ ++ MT P V D E L M + R +P
Sbjct: 46 LVGIVTDRDLVLRGIAIKKPNSQK--ITDAMTEKPVSVEEDASVDEVLHLMASHQLRRIP 103
Query: 77 VVENGEVIALLDIAKCLYDAIARMERAAEK-GKAIAAAVEGVEKHWG 122
V +N ++ ++ + ++ E+ E+ G A++ EG + G
Sbjct: 104 VTKNKKLTGIVTLGD-----LSLSEQTNERAGSALSDISEGDNREEG 145
Score = 31.2 bits (69), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 161 DTVLMATKKMLELRLSSAVVTVENKPR--GILTSKDILMRVISQNLPADSTLVEKVMTPN 218
D V A KM + + + V E+ GI+T +D+++R I+ P +S + MT
Sbjct: 19 DNVYEAAVKMKDANVGAIPVVDEDGETLVGIVTDRDLVLRGIAIKKP-NSQKITDAMTEK 77
Query: 219 PECATIDTPIVDALHIMHDGKFLHLPV 245
P D + + LH+M + +PV
Sbjct: 78 PVSVEEDASVDEVLHLMASHQLRRIPV 104
>sp|O34921|YTOI_BACSU Uncharacterized protein YtoI OS=Bacillus subtilis (strain 168)
GN=ytoI PE=4 SV=1
Length = 439
Score = 36.6 bits (83), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 44/98 (44%), Gaps = 12/98 (12%)
Query: 13 DSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKF 72
D + GILT KDIA + N + KVMT+NP V+ T A Q MV
Sbjct: 229 DDQMKIHGILTSKDIA----GHDRN---ASIEKVMTKNPVTVIGKTSVASAAQMMVWEGI 281
Query: 73 RHLPVVENGE----VIALLDIAKCLYDAIARMERAAEK 106
LPV + + +I+ D+ K L I + + EK
Sbjct: 282 EVLPVTDGHQKLIGMISRQDVLKAL-QMIQKQPQVGEK 318
Score = 31.2 bits (69), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 41/96 (42%), Gaps = 8/96 (8%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSA-VVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
+ V +SP D + +K E VV + K GILTSKDI + A +
Sbjct: 200 RTVYLSPKDKLEKWYEKNFETGHGRFPVVDDQMKIHGILTSKDIA----GHDRNAS---I 252
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
EKVMT NP T + A +M LPV D
Sbjct: 253 EKVMTKNPVTVIGKTSVASAAQMMVWEGIEVLPVTD 288
>sp|Q9HVW0|KDSD_PSEAE Arabinose 5-phosphate isomerase KdsD OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=kdsD PE=1 SV=1
Length = 326
Score = 36.6 bits (83), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 13 DSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKF 72
D + L GI TD D+ R + R +++ + + +VMT + V ++ LA EAL+ M K
Sbjct: 241 DEHGKLAGIFTDGDL-RRALDRGIDVRQVTIDQVMTVHGKTVRAEILAAEALKIMEDNKI 299
Query: 73 RHLPVVE 79
L VV+
Sbjct: 300 GALVVVD 306
Score = 31.2 bits (69), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 158 SPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP 217
S T ++ T+K L + + V+ K GI T D L R + + + +++VMT
Sbjct: 221 SLTGALMEMTRKGLGM---TVVLDEHGKLAGIFTDGD-LRRALDRGIDVRQVTIDQVMTV 276
Query: 218 NPECATIDTPIVDALHIMHDGKFLHLPVVDRD 249
+ + + +AL IM D K L VVD D
Sbjct: 277 HGKTVRAEILAAEALKIMEDNKIGALVVVDAD 308
>sp|Q59011|IMDH_METJA Inosine-5'-monophosphate dehydrogenase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=guaB PE=3 SV=1
Length = 496
Score = 36.6 bits (83), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 154 VVTISPTDTVLMATKKMLELRLSS-AVVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
V+T+SP DTV A M +S VV E+K GI+T +D+ + + + V+
Sbjct: 100 VITVSPDDTVGEAINVMETYSISGLPVVDNEDKLVGIITHRDV------KAIEDKTKKVK 153
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
VMT + CA D +AL +M+ + LP+VD + ++ ++
Sbjct: 154 DVMTKDVVCAKEDVEEEEALELMYANRVERLPIVDDENRLIGII 197
>sp|Q9UGJ0|AAKG2_HUMAN 5'-AMP-activated protein kinase subunit gamma-2 OS=Homo sapiens
GN=PRKAG2 PE=1 SV=1
Length = 569
Score = 36.2 bits (82), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 225 DTPIVDALHIMHDGKFLHLPVVDRDGDVVDV---VDVIHITHAAVATEILLDQIMRQQAQ 281
DTPI+ AL+I + + LPVVD G VVD+ DVI++ AA T LD + Q Q
Sbjct: 442 DTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVINL--AAEKTYNNLDITVTQALQ 499
>sp|O67820|IMDH_AQUAE Inosine-5'-monophosphate dehydrogenase OS=Aquifex aeolicus (strain
VF5) GN=guaB PE=3 SV=1
Length = 490
Score = 36.2 bits (82), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 155 VTISPTDTVLMATKKMLELRLSSA-VVTVENKPRGILTSKDI-LMRVISQNLPADSTLVE 212
VT+ P V A M + ++S VV E K GILT++D+ ++ + P + +
Sbjct: 101 VTVKPDTRVKEALDIMAKYKISGVPVVDEERKLIGILTNRDLRFIKPEDYSKPVSEFMTK 160
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHI 261
+ + PE T+D +A I K LP+VD++G + ++ + I
Sbjct: 161 ENLITAPEGITLD----EAEEIFRKYKIEKLPIVDKEGKIKGLITIKDI 205
>sp|Q91WG5|AAKG2_MOUSE 5'-AMP-activated protein kinase subunit gamma-2 OS=Mus musculus
GN=Prkag2 PE=1 SV=2
Length = 566
Score = 36.2 bits (82), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 225 DTPIVDALHIMHDGKFLHLPVVDRDGDVVDV---VDVIHITHAAVATEILLDQIMRQQAQ 281
DTPI+ AL+I + + LPVVD G VVD+ DVI++ AA T LD + Q Q
Sbjct: 439 DTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVINL--AAEKTYNNLDITVTQALQ 496
>sp|Q5R4S0|AAKG2_PONAB 5'-AMP-activated protein kinase subunit gamma-2 OS=Pongo abelii
GN=PRKAG2 PE=2 SV=1
Length = 524
Score = 36.2 bits (82), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 225 DTPIVDALHIMHDGKFLHLPVVDRDGDVVDV---VDVIHITHAAVATEILLDQIMRQQAQ 281
DTPI+ AL+I + + LPVVD G VVD+ DVI++ AA T LD + Q Q
Sbjct: 397 DTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVINL--AAEKTYNNLDITVTQALQ 454
>sp|Q57976|M556_METJA Methylated protein MJ0556 OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=MJ0556 PE=1 SV=3
Length = 174
Score = 36.2 bits (82), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 18/112 (16%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIAR-ELNLEETPVSKVMTRNPTFVLSDTL 59
M + + + D ++ G +T ++I + + LN V +VM +NP + +D
Sbjct: 49 MIKHNISGMPVVDDRGVMIGFITLREIRKYMTSHPYLN-----VGEVMLKNPPYTTADED 103
Query: 60 AVEALQKMVQG--KFRHLPVVENGE----------VIALLDIAKCLYDAIAR 99
+ A +KM++ K LPV+ +I + DI K LY+ I +
Sbjct: 104 IITAFEKMIESNKKLDQLPVINTKYPEKILGKLEGIIFMEDIIKLLYENIIK 155
>sp|Q9Z826|Y526_CHLPN Uncharacterized protein CPn_0526/CP_0226/CPj0526/CpB0547
OS=Chlamydia pneumoniae GN=CPn_0526 PE=3 SV=1
Length = 329
Score = 36.2 bits (82), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 178 AVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHD 237
+V + + GI T D+ + S S +EKVMT NP C T D+ I AL +M
Sbjct: 237 CIVDPQFRLMGIFTDGDLRRSLASYGGEVLSLSLEKVMTANPRCITEDSDIAIALQLMES 296
Query: 238 GKFLH-LPVVDRD 249
+ LPV+D +
Sbjct: 297 SSPVAVLPVLDNE 309
>sp|Q9HLK8|IMDH_THEAC Inosine-5'-monophosphate dehydrogenase OS=Thermoplasma acidophilum
(strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 /
AMRC-C165) GN=guaB PE=3 SV=1
Length = 485
Score = 35.8 bits (81), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
V TISP + +A M ++ V ++K GI+T +D + + + +V
Sbjct: 101 VYTISPETPIEVARTLMATRNIAGLPVVKDDKLVGIVTKRD--LEFVKKGSSVSDVMVRD 158
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
V+T PE ID +A+ I+H + LP+VD G +V ++
Sbjct: 159 VITA-PENVDID----EAIEILHKNRIEKLPLVDSSGHLVGLI 196
>sp|P15889|YR33_THEPE Uncharacterized 33.4 kDa protein in ribosomal RNA operon
OS=Thermofilum pendens PE=4 SV=1
Length = 300
Score = 35.8 bits (81), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 33/200 (16%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLE-ETPVSKVMTRNPTFVLSDTL 59
M R + AL + D + + GI++++ VI+ N+E V ++MT ++
Sbjct: 109 MVERGIGALAVVDEDLRVVGIVSER----HVISLLANVETHVKVKEIMTSEVVYLSPMDS 164
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
E ++ M + + R LP+V E+ ++ I L ++R + A + +AV
Sbjct: 165 LFEGMRVMSERRIRRLPLVSGEELRGIVTIKDVL-SYVSREDVLARLKEGSRSAV----- 218
Query: 120 HWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAV 179
+ T P +I + +P V+ + V +A M + + + V
Sbjct: 219 -YDT----PLVYISS------KP-----------VLAVEDDVDVGLAVSLMKKHGIGALV 256
Query: 180 VTVENKPRGILTSKDILMRV 199
VT + KPRGI+T +D+L R+
Sbjct: 257 VTHDGKPRGIVTERDVLTRL 276
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
S+VV +SP D++ + M E R+ + + RGI+T KD+L V +++ A
Sbjct: 154 SEVVYLSPMDSLFEGMRVMSERRIRRLPLVSGEELRGIVTIKDVLSYVSREDVLAR---- 209
Query: 212 EKVMTPNPECATIDTPIV 229
+ A DTP+V
Sbjct: 210 ---LKEGSRSAVYDTPLV 224
>sp|P39567|IMDH1_YEAST Putative inosine-5'-monophosphate dehydrogenase 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IMD1 PE=5
SV=1
Length = 403
Score = 35.8 bits (81), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPR----GILTSKDILMRVISQNLPADSTL 210
+ ISPT TV A + + VT + K G +TS+DI Q + +S L
Sbjct: 126 IVISPTTTVGEAKSMKEKYGFAGFPVTADGKRNAKLVGAITSRDI------QFVEDNSLL 179
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
V+ VMT NP + + I+ K L VVD G++V ++
Sbjct: 180 VQDVMTKNPVTGAQGITLSEGNEILKKIKKGRLLVVDEKGNLVSML 225
>sp|Q9M1T1|SETH3_ARATH Probable arabinose 5-phosphate isomerase OS=Arabidopsis thaliana
GN=SETH3 PE=2 SV=1
Length = 350
Score = 35.4 bits (80), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+ ++ LL+ D ++ L G TD D+ + A + + V ++ R P + +T+A
Sbjct: 251 LTSKGCGCLLVVDEHSRLIGTFTDGDLRRTLKASGEAIFKLSVGEMCNRKPRTIGPETMA 310
Query: 61 VEALQKMVQ--GKFRHLPVVE 79
VEA++KM + LPVV
Sbjct: 311 VEAMKKMESPPSPVQFLPVVN 331
>sp|P50094|IMDH4_YEAST Inosine-5'-monophosphate dehydrogenase 4 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IMD4 PE=1
SV=1
Length = 524
Score = 35.4 bits (80), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENK-PR---GILTSKDILMRVISQNLPADSTL 210
+ ISPT TV + S VT + K P G++TS+DI Q L DS +
Sbjct: 127 IVISPTTTVGEVKVMKRKFGFSGFPVTEDGKCPGKLVGLVTSRDI------QFLEDDSLV 180
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256
V +VMT NP + + I+ K L +VD +G++V ++
Sbjct: 181 VSEVMTKNPVTGIKGITLKEGNEILKQTKKGKLLIVDDNGNLVSML 226
>sp|Q5FUK3|RSMH_GLUOX Ribosomal RNA small subunit methyltransferase H OS=Gluconobacter
oxydans (strain 621H) GN=rsmH PE=3 SV=1
Length = 323
Score = 35.0 bits (79), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG-VEK 119
+EAL G++ G A+L+ A C DAI R A E+G A+A G +
Sbjct: 20 LEALSPRAGGRYLDGTFGGGGYARAILNAADCTLDAIDRDPAAIERGNAMAVQANGRLRM 79
Query: 120 HWGT 123
H GT
Sbjct: 80 HQGT 83
>sp|P0DB89|IMDH_STRPQ Inosine-5'-monophosphate dehydrogenase OS=Streptococcus pyogenes
serotype M3 (strain SSI-1) GN=guaB PE=3 SV=1
Length = 493
Score = 34.7 bits (78), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 16/119 (13%)
Query: 157 ISPTDTVLMATKKMLELRLSSA--VVTVENKPR-GILTSKDILMRVISQ-NLPADSTLVE 212
++P V A + M R+S V T+ N+ GI+T++D MR IS N P + E
Sbjct: 104 LTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRD--MRFISNYNAP----ISE 157
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG------DVVDVVDVIHITHAA 265
+ + + A + T + A I+H+ + LP+VD G + D+ VI HAA
Sbjct: 158 HMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEFPHAA 216
>sp|P0DB88|IMDH_STRP3 Inosine-5'-monophosphate dehydrogenase OS=Streptococcus pyogenes
serotype M3 (strain ATCC BAA-595 / MGAS315) GN=guaB PE=3
SV=1
Length = 493
Score = 34.7 bits (78), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 16/119 (13%)
Query: 157 ISPTDTVLMATKKMLELRLSSA--VVTVENKPR-GILTSKDILMRVISQ-NLPADSTLVE 212
++P V A + M R+S V T+ N+ GI+T++D MR IS N P + E
Sbjct: 104 LTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRD--MRFISNYNAP----ISE 157
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG------DVVDVVDVIHITHAA 265
+ + + A + T + A I+H+ + LP+VD G + D+ VI HAA
Sbjct: 158 HMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEFPHAA 216
>sp|Q9UGI9|AAKG3_HUMAN 5'-AMP-activated protein kinase subunit gamma-3 OS=Homo sapiens
GN=PRKAG3 PE=1 SV=3
Length = 489
Score = 34.7 bits (78), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 132 IETLRE----RMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV--TVENK 185
IET RE F+P +V+ISP D++ A +++ R+ V V
Sbjct: 269 IETWREIYLQGCFKP-----------LVSISPNDSLFEAVYTLIKNRIHRLPVLDPVSGN 317
Query: 186 PRGILTSKDIL--MRVISQNLPADSTLVEKVM-----TPNPECATIDT-PIVDALHIMHD 237
ILT K +L + + LP S L + T ++T PI+ AL I D
Sbjct: 318 VLHILTHKRLLKFLHIFGSLLPRPSFLYRTIQDLGIGTFRDLAVVLETAPILTALDIFVD 377
Query: 238 GKFLHLPVVDRDGDVVDV---VDVIHI 261
+ LPVV+ G VV + DVIH+
Sbjct: 378 RRVSALPVVNECGQVVGLYSRFDVIHL 404
>sp|Q57564|Y100_METJA Uncharacterized protein MJ0100 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0100 PE=1 SV=1
Length = 509
Score = 34.7 bits (78), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 189 ILTSK-DILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
+LT + D L R ++ + + TLV+ +++ P A + I++A I+ HLP+VD
Sbjct: 367 LLTERVDTLGRAENKPMKSPITLVKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVD 426
Query: 248 RDGDVVDVVDVIHITHAAVATEILLDQIM 276
G +V ++ I A + +++IM
Sbjct: 427 EHGKLVGIITSWDIAKALAQNKKTIEEIM 455
>sp|P0C0H6|IMDH_STRPY Inosine-5'-monophosphate dehydrogenase OS=Streptococcus pyogenes
GN=guaB PE=1 SV=2
Length = 493
Score = 34.3 bits (77), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 16/119 (13%)
Query: 157 ISPTDTVLMATKKMLELRLSSA--VVTVENKPR-GILTSKDILMRVIS-QNLPADSTLVE 212
++P V A + M R+S V T+ N+ GI+T++D MR IS N P + E
Sbjct: 104 LTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRD--MRFISDYNAP----ISE 157
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG------DVVDVVDVIHITHAA 265
+ + + A + T + A I+H+ + LP+VD G + D+ VI HAA
Sbjct: 158 HMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEFPHAA 216
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.133 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,794,084
Number of Sequences: 539616
Number of extensions: 3912699
Number of successful extensions: 12539
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 12386
Number of HSP's gapped (non-prelim): 199
length of query: 281
length of database: 191,569,459
effective HSP length: 116
effective length of query: 165
effective length of database: 128,974,003
effective search space: 21280710495
effective search space used: 21280710495
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)